BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023301
(284 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224138328|ref|XP_002326575.1| predicted protein [Populus trichocarpa]
gi|222833897|gb|EEE72374.1| predicted protein [Populus trichocarpa]
Length = 420
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/292 (82%), Positives = 262/292 (89%), Gaps = 8/292 (2%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
MVNNGCLCCTVRGDLVKMLL+LAKK + +FDHIVIETTGLAKP PVIETFC+DELVS+YV
Sbjct: 129 MVNNGCLCCTVRGDLVKMLLELAKKNRDKFDHIVIETTGLAKPGPVIETFCSDELVSRYV 188
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+T+VDSKH +QHLNE+KPRFVVNEAVEQVAYADRIILNKIDLV+E EL LT RI
Sbjct: 189 KLDGVVTMVDSKHVLQHLNELKPRFVVNEAVEQVAYADRIILNKIDLVSEEELKGLTMRI 248
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
KHIN MAP+KLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNS + H H + HH+ HH
Sbjct: 249 KHINGMAPIKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSCSSMHQHGTTQEHHQRHH 308
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ- 239
HNH+HDSAVSSV+IV EG LDLDEVDDWLERLIEEKG+DLYRMKG+LSV+GS+Q+Y+FQ
Sbjct: 309 HNHVHDSAVSSVSIVFEGMLDLDEVDDWLERLIEEKGDDLYRMKGVLSVTGSDQRYIFQI 368
Query: 240 -------GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
GVHS LDGCPGK WGPDEKRINKLVFIGRNLDETALRKGFKGCLA
Sbjct: 369 QTGYFLHGVHSLLDGCPGKTWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 420
>gi|255557855|ref|XP_002519957.1| prli-interacting factor l, putative [Ricinus communis]
gi|223541003|gb|EEF42561.1| prli-interacting factor l, putative [Ricinus communis]
Length = 413
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/291 (82%), Positives = 263/291 (90%), Gaps = 7/291 (2%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
MVNNGCLCCTVRGDLVKMLL+L KK++ +FDHIVIETTGLAKP PVIETFC+DELVS++V
Sbjct: 123 MVNNGCLCCTVRGDLVKMLLELVKKRRDKFDHIVIETTGLAKPGPVIETFCSDELVSRHV 182
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+T+VDSKHAMQHLNEVKPRFVVNEAVEQ+AYADRIILNKIDLV+E EL LT RI
Sbjct: 183 KLDGVVTMVDSKHAMQHLNEVKPRFVVNEAVEQIAYADRIILNKIDLVSEAELQRLTNRI 242
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG-- 178
KHIN +APVKLAKYGSVDMDFVLGVGGYDLERIDSEV + NS TH HE+A HHEG
Sbjct: 243 KHINGIAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVRIGNSCSGTHEHETAQEHHEGHH 302
Query: 179 -----HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSE 233
HH+H+HDS VSSV+IVSEGTLDLDEVDDW ERLIEEKGEDLYRMKG+LSV+ S+
Sbjct: 303 HKECKSHHDHVHDSTVSSVSIVSEGTLDLDEVDDWFERLIEEKGEDLYRMKGVLSVTDSD 362
Query: 234 QQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
Q+Y+FQGVHSTLDGCPGK WGP+EKR+NKLVFIGRNLDETALRKGFKGCLA
Sbjct: 363 QRYIFQGVHSTLDGCPGKPWGPNEKRVNKLVFIGRNLDETALRKGFKGCLA 413
>gi|225427419|ref|XP_002264766.1| PREDICTED: COBW domain-containing protein 2 [Vitis vinifera]
gi|296088399|emb|CBI37390.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/283 (85%), Positives = 268/283 (94%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
MVNNGCLCCTVRGDLVKMLL+L KKK+ +FDHIVIETTGLAKPAPVIETFCTDELVS+YV
Sbjct: 132 MVNNGCLCCTVRGDLVKMLLELVKKKRDKFDHIVIETTGLAKPAPVIETFCTDELVSRYV 191
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD+KHAMQHL+EVKPRFVVNEAVEQVAYADRIILNKIDLVTE +L LT+RI
Sbjct: 192 KLDGVVTLVDAKHAMQHLDEVKPRFVVNEAVEQVAYADRIILNKIDLVTEADLERLTQRI 251
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
KHIN MA +KLAK+G VDMDFVLGVGGYDLERIDSEV VD+SHCATH HE+ GHH+GHH
Sbjct: 252 KHINGMAQIKLAKFGCVDMDFVLGVGGYDLERIDSEVQVDSSHCATHQHETGKGHHKGHH 311
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
H+H+HDSAVSSV+IVSEGTLDLDEVDDWLERL+EEKGEDLYRMKG+L V+GS+++YVFQG
Sbjct: 312 HDHVHDSAVSSVSIVSEGTLDLDEVDDWLERLLEEKGEDLYRMKGVLCVNGSDERYVFQG 371
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
VHSTLDGCPGK W PDEKR++KLVFIGRNLDETALRKGF+GCL
Sbjct: 372 VHSTLDGCPGKTWEPDEKRVSKLVFIGRNLDETALRKGFRGCL 414
>gi|297804240|ref|XP_002870004.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315840|gb|EFH46263.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 414
Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/288 (77%), Positives = 255/288 (88%), Gaps = 5/288 (1%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
MVNNGCLCCTVRGDLVKMLL L K K+ +FDHIVIETTGLAKP PVIETF +DEL+ +Y+
Sbjct: 126 MVNNGCLCCTVRGDLVKMLLDLVKNKRDKFDHIVIETTGLAKPGPVIETFNSDELLPRYI 185
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTE-TELGSLTER 119
KLDGV+TLVDSKHAM+HLNEVKPRFVVNEAVEQ+AYADRI+LNKIDLV+E +EL LT+R
Sbjct: 186 KLDGVVTLVDSKHAMRHLNEVKPRFVVNEAVEQIAYADRIVLNKIDLVSEPSELEHLTKR 245
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCA----THHHESAHGH 175
IK IN MAP+K K+G VDMDFVLGVGGYDLERIDSEV+ D CA HHH+ +HG
Sbjct: 246 IKQINCMAPIKHTKFGDVDMDFVLGVGGYDLERIDSEVNGDGLSCAEDHDHHHHQCSHGK 305
Query: 176 HEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQ 235
H+ H H+H+HDSAV+SV+IVSEG LDLDEVDDWLERLIEEKG+DLYRMKG+LS+ S+Q+
Sbjct: 306 HKEHQHDHVHDSAVTSVSIVSEGKLDLDEVDDWLERLIEEKGDDLYRMKGVLSIDSSDQR 365
Query: 236 YVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
Y+FQGVHS LDGCPGK+WGP+EKRINKLVFIGRNLDET LRKGFKGCL
Sbjct: 366 YIFQGVHSMLDGCPGKSWGPEEKRINKLVFIGRNLDETILRKGFKGCL 413
>gi|356559093|ref|XP_003547836.1| PREDICTED: COBW domain-containing protein 2-like [Glycine max]
Length = 424
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/285 (80%), Positives = 257/285 (90%), Gaps = 2/285 (0%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
MVNNGCLCCTVRGDLVKMLL+L +KK+ +FDHIVIETTGLAKPAPVIETFC+DELVSQ+V
Sbjct: 139 MVNNGCLCCTVRGDLVKMLLELVRKKRDKFDHIVIETTGLAKPAPVIETFCSDELVSQHV 198
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD KHAM+HLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTE+EL LT++I
Sbjct: 199 KLDGVVTLVDCKHAMKHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTESELNILTKKI 258
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESA--HGHHEG 178
KHIN MA +K AK+GSVDMDFVLGVGGYDLERI+SEV + ++H +S H H
Sbjct: 259 KHINGMAQIKQAKFGSVDMDFVLGVGGYDLERIESEVPGECPSSSSHQDDSGHEHKGHHH 318
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HHH+H+HDSAVSSV+IV+EGTLDLDEVDDWLER+IEEKG+DLYRMKG+LSV S+Q+YVF
Sbjct: 319 HHHDHVHDSAVSSVSIVAEGTLDLDEVDDWLERVIEEKGDDLYRMKGVLSVDSSDQRYVF 378
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVHS LDGCPGK W P+EKRINKLVFIGRNLDETAL+KGFKGCL
Sbjct: 379 QGVHSMLDGCPGKTWEPNEKRINKLVFIGRNLDETALKKGFKGCL 423
>gi|449456911|ref|XP_004146192.1| PREDICTED: COBW domain-containing protein 2-like [Cucumis sativus]
gi|449512950|ref|XP_004164186.1| PREDICTED: COBW domain-containing protein 2-like [Cucumis sativus]
Length = 424
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/289 (80%), Positives = 257/289 (88%), Gaps = 7/289 (2%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
MVNNGCLCCTVRGDLVKMLL+L KKK+ +FDHIVIETTGLAKP PVIETFCTDELVS+YV
Sbjct: 136 MVNNGCLCCTVRGDLVKMLLELVKKKRDKFDHIVIETTGLAKPGPVIETFCTDELVSRYV 195
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRII+NKIDLV+ EL LT++I
Sbjct: 196 KLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIIMNKIDLVSPEELEQLTQKI 255
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHES------AHG 174
K INAMA VKL K+GSVD+DFVLGVGGYDL+RIDS+V N+ H HE+ H
Sbjct: 256 KRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSQVEA-NTCSGDHKHEAQHEHHKGHD 314
Query: 175 HHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQ 234
HH HHH+H+HDSAVSSV+IVSEG LDLDE+DDWLERLIEEKG+DLYRMKG+LSV+G +Q
Sbjct: 315 HHHHHHHDHVHDSAVSSVSIVSEGLLDLDEIDDWLERLIEEKGDDLYRMKGVLSVNGHDQ 374
Query: 235 QYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+YVFQGVHS LDGCPGKAWG DEKRINKLVFIG+NLDETALRKGFKGCL
Sbjct: 375 RYVFQGVHSILDGCPGKAWGSDEKRINKLVFIGKNLDETALRKGFKGCL 423
>gi|357165567|ref|XP_003580428.1| PREDICTED: COBW domain-containing protein 1-like [Brachypodium
distachyon]
Length = 410
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/283 (74%), Positives = 240/283 (84%), Gaps = 3/283 (1%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
MVNNGCLCCTVRGDLVKMLL+L K+K +FDHIVIETTGLAKP PVIETFC+DELVS+YV
Sbjct: 130 MVNNGCLCCTVRGDLVKMLLKLVKQKGDKFDHIVIETTGLAKPGPVIETFCSDELVSKYV 189
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD KHAM+HLNEVKPR+VVNEAVEQVAYADRIILNKIDLV + E L +I
Sbjct: 190 KLDGVVTLVDCKHAMKHLNEVKPRWVVNEAVEQVAYADRIILNKIDLVDDAEQEVLANKI 249
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
K IN MA +K AK+G VDMDFVLG+GGYDL+RI+SEV + S H H GHH
Sbjct: 250 KLINGMAQMKKAKFGDVDMDFVLGIGGYDLDRIESEVQSNESKETGHCHSGD---AHGHH 306
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
H+H+HDSAV+SV+IVSEG LDLDEV+DWLERL++EKGEDLYR+KG++SV+ S ++VFQG
Sbjct: 307 HDHVHDSAVTSVSIVSEGVLDLDEVNDWLERLVDEKGEDLYRLKGVISVNESTGRFVFQG 366
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
VHS L+GCP K W PDEKRINKLVFIGRNLDE ALRK FKGCL
Sbjct: 367 VHSMLEGCPAKPWEPDEKRINKLVFIGRNLDEAALRKAFKGCL 409
>gi|326529359|dbj|BAK01073.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 406
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/283 (72%), Positives = 239/283 (84%), Gaps = 3/283 (1%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
MVNNGCLCCTVRGDLVKMLL+L K+K +FDHIVIETTGLAKP PVIETFC+DELVS+YV
Sbjct: 126 MVNNGCLCCTVRGDLVKMLLKLVKQKGDKFDHIVIETTGLAKPGPVIETFCSDELVSKYV 185
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD KHAMQHLNEVK R+VVNEAVEQVAYADRIILNK DLV E EL LT +I
Sbjct: 186 KLDGVVTLVDCKHAMQHLNEVKARWVVNEAVEQVAYADRIILNKTDLVDEAELEVLTNKI 245
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
K IN MA +K AK+G VDMDFVLG+GGYDL+R+++ V ++ + GH GHH
Sbjct: 246 KLINGMAEMKKAKFGDVDMDFVLGIGGYDLDRVEAAVQLNENK---ETGHCHSGHDHGHH 302
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
H+H+HDSAV+SV+IVSEG LDLDEV+DWLERL++EKGEDLYR+KG++SV+ S ++VFQG
Sbjct: 303 HDHVHDSAVTSVSIVSEGVLDLDEVNDWLERLVDEKGEDLYRLKGVVSVNESTGRFVFQG 362
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
VHS L+GCP K W DEKRI+KLVFIGRNLDE ALRK FKGCL
Sbjct: 363 VHSMLEGCPAKPWEDDEKRISKLVFIGRNLDEAALRKAFKGCL 405
>gi|115460306|ref|NP_001053753.1| Os04g0599700 [Oryza sativa Japonica Group]
gi|38345768|emb|CAE03469.2| OSJNBa0083N12.6 [Oryza sativa Japonica Group]
gi|113565324|dbj|BAF15667.1| Os04g0599700 [Oryza sativa Japonica Group]
gi|215694465|dbj|BAG89434.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195492|gb|EEC77919.1| hypothetical protein OsI_17249 [Oryza sativa Indica Group]
gi|222629477|gb|EEE61609.1| hypothetical protein OsJ_16026 [Oryza sativa Japonica Group]
Length = 411
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/283 (72%), Positives = 235/283 (83%), Gaps = 1/283 (0%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
MVNNGCLCCTVRGDLVKMLL+L K+K +FDHIVIETTGLAKP PVIETFC+DELVS+YV
Sbjct: 129 MVNNGCLCCTVRGDLVKMLLKLVKQKGDKFDHIVIETTGLAKPGPVIETFCSDELVSRYV 188
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+T+VD KHAM+HLNEVK R+VVNEAVEQVAYADRIILNK DLV EL L +I
Sbjct: 189 KLDGVVTMVDCKHAMKHLNEVKARWVVNEAVEQVAYADRIILNKTDLVDNAELEVLINKI 248
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
K IN MA ++ K+G VDMDFVLG+GGYDL+RI+SEV + H H + H HH
Sbjct: 249 KLINGMAQMRKTKFGDVDMDFVLGIGGYDLDRIESEVQLHERKETGHCH-AGEEHGHQHH 307
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
H H+HDSAVSSV+IVSEG LDLDEV+DWLERL+EEKGEDLYR+KG++SV+ S ++VFQG
Sbjct: 308 HGHVHDSAVSSVSIVSEGVLDLDEVNDWLERLVEEKGEDLYRLKGVISVNESTGRFVFQG 367
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
VHS L+GCP K W PDEKR NKLVFIGRNLDE ALRK FKGCL
Sbjct: 368 VHSMLEGCPAKPWEPDEKRFNKLVFIGRNLDEAALRKAFKGCL 410
>gi|242074210|ref|XP_002447041.1| hypothetical protein SORBIDRAFT_06g027386 [Sorghum bicolor]
gi|241938224|gb|EES11369.1| hypothetical protein SORBIDRAFT_06g027386 [Sorghum bicolor]
Length = 283
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/287 (68%), Positives = 235/287 (81%), Gaps = 9/287 (3%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKP----APVIETFCTDELV 56
MVNNGCLCCTVRGDLVKMLL+L K+K +FDHIVIETTG + PVIETF +DELV
Sbjct: 1 MVNNGCLCCTVRGDLVKMLLKLVKQKGDKFDHIVIETTGKSYWNKVLCPVIETFSSDELV 60
Query: 57 SQYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSL 116
S+YVKLDGV+T+VD KHAM+HLNEVK R+VVNEAVEQVAYADRIILNK+DLV + EL +L
Sbjct: 61 SKYVKLDGVVTMVDCKHAMKHLNEVKARWVVNEAVEQVAYADRIILNKVDLVDDAELEAL 120
Query: 117 TERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHH 176
T ++K IN MA +K AK+G VDMDFVLG+GGYDL+RI++EV + + HG
Sbjct: 121 TNKLKFINGMAQMKTAKFGDVDMDFVLGIGGYDLDRIEAEVQD-----SKETYHCHHGDE 175
Query: 177 EGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQY 236
GHHH+H+HDSAV+SV+IVSEG LDLDEV+DWLERL++EKGEDLYR+KG++SV+ S ++
Sbjct: 176 HGHHHDHVHDSAVTSVSIVSEGLLDLDEVNDWLERLVDEKGEDLYRLKGVISVNESTGRF 235
Query: 237 VFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+FQGVH L+GCP K W PDEKRINKLVFI RNLDE ALRK F GCL
Sbjct: 236 MFQGVHCMLEGCPAKPWEPDEKRINKLVFICRNLDEAALRKAFNGCL 282
>gi|116788570|gb|ABK24925.1| unknown [Picea sitchensis]
Length = 430
Score = 359 bits (922), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 181/283 (63%), Positives = 226/283 (79%), Gaps = 3/283 (1%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV+ML +L K K+ +FDHIVIETTGLA PAPVI+TF D V+ +V
Sbjct: 150 MLNNGCLCCTVRGDLVRMLAELVKTKRDKFDHIVIETTGLANPAPVIQTFYMDHKVAHHV 209
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
+LDGV+TLVDSKHA+QHL EVKP VNEAVEQVAYADR+ILNKIDLV E EL +LT++I
Sbjct: 210 RLDGVVTLVDSKHAIQHLEEVKPEGTVNEAVEQVAYADRLILNKIDLVGEEELQALTQKI 269
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
K IN MA +K +G VD+D+VLG+GG+DL+RI+S+V ++S HH+ H GH
Sbjct: 270 KRINGMAQIKRTTFGKVDIDYVLGIGGFDLDRIESDVQDESS--TKDHHDHHDHDHHGHK 327
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
H HDS VSSV+IV EGTLDLDE+++W+ +L+ E+ ED+YRMKG+LSV G +++YVFQG
Sbjct: 328 HGKAHDSGVSSVSIVCEGTLDLDEINEWMGKLVNERSEDIYRMKGVLSVDGFDERYVFQG 387
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
VHS +DG GK WG EKR NK+VFIG+NLDE ALRKGF+ C+
Sbjct: 388 VHSIIDGSVGKPWG-SEKRTNKIVFIGKNLDEAALRKGFRSCI 429
>gi|148907039|gb|ABR16663.1| unknown [Picea sitchensis]
Length = 450
Score = 350 bits (898), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 169/299 (56%), Positives = 221/299 (73%), Gaps = 18/299 (6%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV+ML +L K K +FDHIVIETTGLA PAP+I+TF ++ ++ ++
Sbjct: 153 MLNNGCLCCTVRGDLVRMLSELVKTKIDKFDHIVIETTGLANPAPIIQTFYAEDKIADHI 212
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD K+A +HL +VKP+ VVNEAVEQ+AYADRIILNKIDLV E E +L ++I
Sbjct: 213 KLDGVVTLVDVKNAKRHLEQVKPKGVVNEAVEQIAYADRIILNKIDLVGEAETKALMQKI 272
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDN----------------SHC 164
K IN MA VK K+G VDMD+VLG+GG+DL+RI++EV ++ H
Sbjct: 273 KRINGMARVKYTKFGVVDMDYVLGIGGFDLDRIETEVRTESLSEDHDEHDHHHEHKHDHD 332
Query: 165 ATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMK 224
H + GH H H+H+HD VSSV+IV +GTL+L +++ WL L+ E+ +D+YRMK
Sbjct: 333 HHEHGHDSDGH--SHEHDHVHDPGVSSVSIVCDGTLNLTKINTWLGELLLERSDDIYRMK 390
Query: 225 GILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
G+LSV G ++YVFQGVH G P + WGPDEKR NK++FIG+NLDE AL+KGF+ CL
Sbjct: 391 GLLSVDGFNERYVFQGVHDLFHGSPDRVWGPDEKRTNKIIFIGKNLDEEALQKGFRECL 449
>gi|359482402|ref|XP_003632769.1| PREDICTED: COBW domain-containing protein 2-like isoform 2 [Vitis
vinifera]
Length = 437
Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 170/283 (60%), Positives = 219/283 (77%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV+M+ +L KK+G+FDHIVIETTGLA PAP+I+TF ++ + V
Sbjct: 152 MLNNGCLCCTVRGDLVRMISELVNKKKGKFDHIVIETTGLANPAPIIQTFYAEDQIFNDV 211
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD+KHA HL+EVKP+ VVNEAVEQ+AYADRII+NKIDLV E E+ SL +RI
Sbjct: 212 KLDGVVTLVDAKHADFHLDEVKPKGVVNEAVEQIAYADRIIVNKIDLVGEPEIASLVQRI 271
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
K+IN +A +K ++G VD+D+VLGVGG+DLERI S D+ C H + H++ H
Sbjct: 272 KNINRLAHLKRTEFGKVDLDYVLGVGGFDLERIKSRFFQDHERCLVGHMHANAEHNDHHS 331
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
H+H HD VSSV+IV EG+LDL++ + WL L+ E+ ED+YRMKG+LSV G ++++VFQG
Sbjct: 332 HDHTHDPGVSSVSIVCEGSLDLEKANIWLGTLLLERSEDIYRMKGLLSVQGMDERFVFQG 391
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
VH G P + WGPDE R+NK+VFIG+NLD L KGFK CL
Sbjct: 392 VHDIFQGSPDRLWGPDEPRVNKIVFIGKNLDGKELEKGFKACL 434
>gi|255553313|ref|XP_002517699.1| prli-interacting factor l, putative [Ricinus communis]
gi|223543331|gb|EEF44863.1| prli-interacting factor l, putative [Ricinus communis]
Length = 426
Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 162/284 (57%), Positives = 213/284 (75%), Gaps = 15/284 (5%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV+M+ +L KK+G FDHIVIETTGLA PAP+I+TF ++ + V
Sbjct: 156 MLNNGCLCCTVRGDLVRMIGELVDKKRGNFDHIVIETTGLANPAPIIQTFYAEDKIFNDV 215
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD+KHA HL+EVKP+ VVNEA+EQ+AYADR+I+NK DLV E E+ SL +RI
Sbjct: 216 KLDGVVTLVDAKHATFHLDEVKPKGVVNEAMEQIAYADRVIVNKTDLVGEKEIASLVQRI 275
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
++IN MA +K ++G VD+D+VLG+GG+DLER+ C+ S HH+G H
Sbjct: 276 RNINRMAHMKRTQFGQVDLDYVLGIGGFDLERL----------CSL----SFPYHHDGQH 321
Query: 181 -HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
H+H HD VSSV+IV EG LDL++ + WL L+ ++ ED+YRMKG+L V G ++++VFQ
Sbjct: 322 SHDHTHDPGVSSVSIVCEGILDLEKANMWLGNLLLDRSEDIYRMKGLLCVQGMDERFVFQ 381
Query: 240 GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
GVH G P + WGPDE RINK+VFIG+NL+ + KGFK CL
Sbjct: 382 GVHDIFQGSPDRLWGPDEPRINKIVFIGKNLEAQEIEKGFKACL 425
>gi|357137477|ref|XP_003570327.1| PREDICTED: COBW domain-containing protein 2-like isoform 2
[Brachypodium distachyon]
Length = 422
Score = 340 bits (871), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 171/283 (60%), Positives = 218/283 (77%), Gaps = 7/283 (2%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV+M+ +L KK+G+FDH+VIETTGLA PAP+I+TF ++ V V
Sbjct: 144 MLNNGCLCCTVRGDLVRMIGELVDKKKGKFDHLVIETTGLANPAPIIQTFYAEDTVFNDV 203
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVDSKHA HL+EVKP+ +VNEAV+Q+AYADRII+NK DLV+ETE+ SL ERI
Sbjct: 204 KLDGVVTLVDSKHARLHLDEVKPKGIVNEAVQQIAYADRIIVNKTDLVSETEVSSLVERI 263
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
+ IN MA +K A+YG VD+D+VLG+GG+DLERI+S V + H++ H GHH
Sbjct: 264 RSINRMANLKRAEYGKVDLDYVLGIGGFDLERIESAV-------SEEPHDNHAEHEHGHH 316
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
H+H HD VSSV+IV EG +DL++ D WL L+ E+ +D+YRMKG+LSVSG Q++VFQG
Sbjct: 317 HDHTHDPGVSSVSIVCEGEMDLEKADMWLGNLLLERSDDIYRMKGLLSVSGMPQRFVFQG 376
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
VH G P + W P+E RINK+VFIGRNL+ L GFK CL
Sbjct: 377 VHDIFQGSPDRMWEPNEPRINKIVFIGRNLNREELETGFKDCL 419
>gi|168011035|ref|XP_001758209.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690665|gb|EDQ77031.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 346
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/287 (58%), Positives = 225/287 (78%), Gaps = 6/287 (2%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGC+CCTVRGDLV+ML +L + K+G FDHI+IETTGLA PAP+I+TF +E +++ +
Sbjct: 62 MLNNGCMCCTVRGDLVRMLGELLRNKKGMFDHIIIETTGLANPAPIIQTFYLEEELAERL 121
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
+LDGV+TLVD+KHA QH+ EVKP VVNEAVEQ+AYADRIILNKIDLV E+E+ S+ RI
Sbjct: 122 RLDGVVTLVDAKHATQHIEEVKPDGVVNEAVEQIAYADRIILNKIDLVKESEVESMMRRI 181
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
K IN +A V+ AK VD+D+VLGVGG+DLER + +H H H +H H H
Sbjct: 182 KRINGLAQVRKAKKAEVDLDYVLGVGGFDLERFTPDHEHTEAHAHAHDHSHSHNHD--HD 239
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ- 239
H+H+HD VSSV+IV +G LDLD +++WLE +I+E+ E++YR KG+LS+ G ++++VFQ
Sbjct: 240 HDHVHDPGVSSVSIVCDGALDLDRINNWLESVIDERSEEIYRAKGVLSIDGWDERFVFQV 299
Query: 240 ---GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
GVH+ L+G P + WGPDEKR++K+VFIGRNLDET+LRKGF+ C+
Sbjct: 300 GNLGVHALLEGAPERNWGPDEKRVSKIVFIGRNLDETSLRKGFQECV 346
>gi|357137475|ref|XP_003570326.1| PREDICTED: COBW domain-containing protein 2-like isoform 1
[Brachypodium distachyon]
Length = 440
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/294 (59%), Positives = 219/294 (74%), Gaps = 11/294 (3%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV+M+ +L KK+G+FDH+VIETTGLA PAP+I+TF ++ V V
Sbjct: 144 MLNNGCLCCTVRGDLVRMIGELVDKKKGKFDHLVIETTGLANPAPIIQTFYAEDTVFNDV 203
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVDSKHA HL+EVKP+ +VNEAV+Q+AYADRII+NK DLV+ETE+ SL ERI
Sbjct: 204 KLDGVVTLVDSKHARLHLDEVKPKGIVNEAVQQIAYADRIIVNKTDLVSETEVSSLVERI 263
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHV---DN--------SHCATHHH 169
+ IN MA +K A+YG VD+D+VLG+GG+DLERI+S V DN H HHH
Sbjct: 264 RSINRMANLKRAEYGKVDLDYVLGIGGFDLERIESAVSEEPHDNHAEHEHGHHHDHHHHH 323
Query: 170 ESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSV 229
H+ H H+H HD VSSV+IV EG +DL++ D WL L+ E+ +D+YRMKG+LSV
Sbjct: 324 HDHDHRHDHHAHDHTHDPGVSSVSIVCEGEMDLEKADMWLGNLLLERSDDIYRMKGLLSV 383
Query: 230 SGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
SG Q++VFQGVH G P + W P+E RINK+VFIGRNL+ L GFK CL
Sbjct: 384 SGMPQRFVFQGVHDIFQGSPDRMWEPNEPRINKIVFIGRNLNREELETGFKDCL 437
>gi|413939342|gb|AFW73893.1| hypothetical protein ZEAMMB73_196871 [Zea mays]
Length = 764
Score = 330 bits (846), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 173/298 (58%), Positives = 219/298 (73%), Gaps = 15/298 (5%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV+M+ +L KK+G+FDHIVIETTGLA PAP+I+TF +++V V
Sbjct: 464 MLNNGCLCCTVRGDLVRMIGELVNKKKGRFDHIVIETTGLANPAPIIQTFYAEDVVFNDV 523
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD+KHA QHL+EVKP+ +VNEAV+Q+AYADRII+NKIDLV E E+ SL ERI
Sbjct: 524 KLDGVVTLVDAKHARQHLDEVKPKGIVNEAVQQIAYADRIIVNKIDLVKEPEVLSLVERI 583
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDN---------------SHCA 165
+ IN MA +K A+YG VD+D+VLG+GG+DLERI+S V + +
Sbjct: 584 RGINHMANLKRAEYGKVDLDYVLGIGGFDLERIESAVAEKSHEDHAEHDHEHHEHENEHD 643
Query: 166 THHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKG 225
HH H+ H H+H HD VSSV+IV EG +DL++ D WL L+ E ED+YRMKG
Sbjct: 644 HDHHHHHDHDHDHHAHDHTHDPGVSSVSIVCEGEMDLEKADMWLGNLLLEHSEDIYRMKG 703
Query: 226 ILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+LSVSG Q++VFQGVH G P + W P+E RINK+VFIGRNL++ L KGFK CL
Sbjct: 704 LLSVSGMPQRFVFQGVHDIFQGSPERMWEPNEPRINKIVFIGRNLNKEELDKGFKDCL 761
>gi|359482400|ref|XP_002268800.2| PREDICTED: COBW domain-containing protein 2-like isoform 1 [Vitis
vinifera]
gi|297743555|emb|CBI36422.3| unnamed protein product [Vitis vinifera]
Length = 455
Score = 329 bits (844), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 171/301 (56%), Positives = 222/301 (73%), Gaps = 18/301 (5%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV+M+ +L KK+G+FDHIVIETTGLA PAP+I+TF ++ + V
Sbjct: 152 MLNNGCLCCTVRGDLVRMISELVNKKKGKFDHIVIETTGLANPAPIIQTFYAEDQIFNDV 211
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD+KHA HL+EVKP+ VVNEAVEQ+AYADRII+NKIDLV E E+ SL +RI
Sbjct: 212 KLDGVVTLVDAKHADFHLDEVKPKGVVNEAVEQIAYADRIIVNKIDLVGEPEIASLVQRI 271
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDN------------------S 162
K+IN +A +K ++G VD+D+VLGVGG+DLERI+S V+ +
Sbjct: 272 KNINRLAHLKRTEFGKVDLDYVLGVGGFDLERIESAVNSEGVKEDHATHSHDHDHDHDHH 331
Query: 163 HCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYR 222
H H+ H H++ H H+H HD VSSV+IV EG+LDL++ + WL L+ E+ ED+YR
Sbjct: 332 DHHHHEHDHRHEHNDHHSHDHTHDPGVSSVSIVCEGSLDLEKANIWLGTLLLERSEDIYR 391
Query: 223 MKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
MKG+LSV G ++++VFQGVH G P + WGPDE R+NK+VFIG+NLD L KGFK C
Sbjct: 392 MKGLLSVQGMDERFVFQGVHDIFQGSPDRLWGPDEPRVNKIVFIGKNLDGKELEKGFKAC 451
Query: 283 L 283
L
Sbjct: 452 L 452
>gi|218191755|gb|EEC74182.1| hypothetical protein OsI_09310 [Oryza sativa Indica Group]
Length = 447
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/308 (55%), Positives = 218/308 (70%), Gaps = 36/308 (11%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV+M+ +L KK+G+FDHI+IETTGLA PAP+I+TF ++ V V
Sbjct: 148 MLNNGCLCCTVRGDLVRMIGELVDKKKGKFDHIIIETTGLANPAPIIQTFYAEDTVFNDV 207
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD+KHA HL+EVKP+ +VNEAV+Q+AYADRII+NKIDLV+E E+ SL ERI
Sbjct: 208 KLDGVVTLVDAKHARLHLDEVKPKGIVNEAVQQIAYADRIIVNKIDLVSEPEVSSLVERI 267
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG-- 178
+ +N MA +K A+YG VD+D+VLG+GG+DLERI+S V E +H HH G
Sbjct: 268 RSMNRMAHLKRAEYGKVDLDYVLGIGGFDLERIESAV-----------TEESHDHHTGHE 316
Query: 179 -----------------------HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEE 215
H H+H HD VSSV+IV EG +DL++ D WL L+ E
Sbjct: 317 HKHDHEHHHHDHHHHDHEHKHDHHAHDHTHDPGVSSVSIVCEGEMDLEKADMWLGNLLLE 376
Query: 216 KGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETAL 275
+ +D+YRMKG+LSVSG Q++VFQGVH G P + W P+E RINK+VFIG+NL+ L
Sbjct: 377 RSDDIYRMKGLLSVSGMPQRFVFQGVHDIFQGSPERMWEPNEPRINKIVFIGKNLNGEEL 436
Query: 276 RKGFKGCL 283
KGFK CL
Sbjct: 437 EKGFKDCL 444
>gi|51090705|dbj|BAD36713.1| PRLI-interacting factor L-like [Oryza sativa Japonica Group]
gi|215769352|dbj|BAH01581.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 447
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/308 (55%), Positives = 218/308 (70%), Gaps = 36/308 (11%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV+M+ +L KK+G+FDHI+IETTGLA PAP+I+TF ++ V V
Sbjct: 148 MLNNGCLCCTVRGDLVRMIGELVDKKKGKFDHIIIETTGLANPAPIIQTFYAEDTVFNDV 207
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD+KHA HL+EVKP+ +VNEAV+Q+AYADRII+NKIDLV+E E+ SL ERI
Sbjct: 208 KLDGVVTLVDAKHARLHLDEVKPKGIVNEAVQQIAYADRIIVNKIDLVSEPEVSSLVERI 267
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG-- 178
+ +N MA +K A+YG VD+D+VLG+GG+DLERI+S V E +H HH G
Sbjct: 268 RSMNRMAHLKRAEYGKVDLDYVLGIGGFDLERIESAV-----------TEVSHDHHTGHE 316
Query: 179 -----------------------HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEE 215
H H+H HD VSSV+IV EG +DL++ D WL L+ E
Sbjct: 317 HKHDHEHHHHDHHHHDHEHKHDHHAHDHTHDPGVSSVSIVCEGEMDLEKADMWLGNLLLE 376
Query: 216 KGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETAL 275
+ +D+YRMKG+LSVSG Q++VFQGVH G P + W P+E RINK+VFIG+NL+ L
Sbjct: 377 RSDDIYRMKGLLSVSGMPQRFVFQGVHDIFQGSPERMWEPNEPRINKIVFIGKNLNGEEL 436
Query: 276 RKGFKGCL 283
KGFK CL
Sbjct: 437 EKGFKDCL 444
>gi|359482404|ref|XP_003632770.1| PREDICTED: COBW domain-containing protein 2-like isoform 3 [Vitis
vinifera]
Length = 426
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 165/283 (58%), Positives = 215/283 (75%), Gaps = 11/283 (3%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV+M+ +L KK+G+FDHIVIETTGLA PAP+I+TF ++ + V
Sbjct: 152 MLNNGCLCCTVRGDLVRMISELVNKKKGKFDHIVIETTGLANPAPIIQTFYAEDQIFNDV 211
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD+KHA HL+EVKP+ VVNEAVEQ+AYADRII+NKIDLV E E+ SL +RI
Sbjct: 212 KLDGVVTLVDAKHADFHLDEVKPKGVVNEAVEQIAYADRIIVNKIDLVGEPEIASLVQRI 271
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
K+IN +A +K ++G VD+D+VLGVGG+DLER+ + + H++ H
Sbjct: 272 KNINRLAHLKRTEFGKVDLDYVLGVGGFDLERL-----------FLYLLFFTYHHNDHHS 320
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
H+H HD VSSV+IV EG+LDL++ + WL L+ E+ ED+YRMKG+LSV G ++++VFQG
Sbjct: 321 HDHTHDPGVSSVSIVCEGSLDLEKANIWLGTLLLERSEDIYRMKGLLSVQGMDERFVFQG 380
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
VH G P + WGPDE R+NK+VFIG+NLD L KGFK CL
Sbjct: 381 VHDIFQGSPDRLWGPDEPRVNKIVFIGKNLDGKELEKGFKACL 423
>gi|297839889|ref|XP_002887826.1| PTAC17 [Arabidopsis lyrata subsp. lyrata]
gi|297333667|gb|EFH64085.1| PTAC17 [Arabidopsis lyrata subsp. lyrata]
Length = 437
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/293 (56%), Positives = 215/293 (73%), Gaps = 10/293 (3%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV+M+ +L K+G+FDHIVIETTGLA PAP+I+TF +E + V
Sbjct: 144 MLNNGCLCCTVRGDLVRMIGELVNTKKGKFDHIVIETTGLANPAPIIQTFYAEEDIFNDV 203
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD+KHA HL+EVKP VVNEAVEQ+AYADRII+NK DLV E ELGS+ +RI
Sbjct: 204 KLDGVVTLVDAKHARLHLDEVKPTGVVNEAVEQIAYADRIIVNKTDLVGEAELGSVVQRI 263
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVH----------VDNSHCATHHHE 170
K IN+MA + KYG+VD+D+VLG+GG+DLERI+S V+ + HH
Sbjct: 264 KTINSMAQMTRTKYGNVDLDYVLGIGGFDLERIESSVNEDDKGDHHDHDHDHDHDHDHHH 323
Query: 171 SAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVS 230
H H H+H HD VSSV+IV +G+LDL++ + WL L+ E+ ED+YRMKG+LSV
Sbjct: 324 HDEREHHNHSHDHTHDPGVSSVSIVCQGSLDLEKANMWLGTLLMERSEDIYRMKGLLSVH 383
Query: 231 GSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
E+++VFQGVH G P + WG +E+R+NK+VFIG+NL+ L KGFK CL
Sbjct: 384 TMEERFVFQGVHDIFQGSPDRLWGRNEERVNKIVFIGKNLNREELEKGFKACL 436
>gi|224134440|ref|XP_002327406.1| predicted protein [Populus trichocarpa]
gi|222835960|gb|EEE74381.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/299 (55%), Positives = 215/299 (71%), Gaps = 16/299 (5%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV+M+ L K+K+ +FDHIVIETTGLA PAP+I+TF ++ V V
Sbjct: 90 MLNNGCLCCTVRGDLVRMIADLVKRKKDKFDHIVIETTGLANPAPIIQTFYAEDQVFNDV 149
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD+KHA HL+EVKP+ VVNEAVEQ+AYADR+ILNK DLV E E+ SL +RI
Sbjct: 150 KLDGVVTLVDAKHAPLHLDEVKPKGVVNEAVEQIAYADRVILNKTDLVGEQEIASLVQRI 209
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSH----------------C 164
++IN MA +K +YG VD+D+VLG+GG+DLERI+S V ++
Sbjct: 210 RNINRMANLKRTQYGKVDLDYVLGIGGFDLERIESAVSDEDRKEDHASHDHDHDHHHHHH 269
Query: 165 ATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMK 224
H H + H H+H HD VSSV+IV EG+LDL++ + WL L+ E+ ED+YRMK
Sbjct: 270 HDEHDHEHDHHDDHHSHDHTHDPGVSSVSIVCEGSLDLEKANFWLGTLLMERSEDIYRMK 329
Query: 225 GILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
G+LSV G ++++VFQGVH G P + WGP+E R NK+VFIG+NLD L KGFK CL
Sbjct: 330 GLLSVQGMDERFVFQGVHDIFQGSPDRLWGPNEPRTNKIVFIGKNLDAQELEKGFKACL 388
>gi|356536502|ref|XP_003536776.1| PREDICTED: COBW domain-containing protein 2-like isoform 2 [Glycine
max]
Length = 437
Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 164/295 (55%), Positives = 219/295 (74%), Gaps = 12/295 (4%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV+M+ +L KK+G+FDHIVIETTGLA PAP+I+TF +E + V
Sbjct: 142 MLNNGCLCCTVRGDLVRMISELVAKKKGKFDHIVIETTGLANPAPIIQTFYAEENIFNDV 201
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD+KHA HL+EVKP+ VVNEAVEQ+AYADRII+NK DLV E+++ SL +RI
Sbjct: 202 KLDGVVTLVDAKHAGFHLDEVKPKGVVNEAVEQIAYADRIIVNKTDLVGESDIASLVQRI 261
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSH------------CATHH 168
+ IN++A +K +YG V++D+VLG+GG+DLERI++ ++ + + H
Sbjct: 262 RKINSLANLKRTEYGKVNLDYVLGIGGFDLERIENAINDEGAKEDHDHSHDHEHEHHDHD 321
Query: 169 HESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILS 228
H H+ H H+H HD VSSV+IV EG+LDL++ + WL L+ ++ ED+YRMKG+LS
Sbjct: 322 HHHHDHDHDHHSHDHSHDPGVSSVSIVCEGSLDLEKANMWLGTLLLDRSEDIYRMKGLLS 381
Query: 229 VSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
V G +++VFQGVH G P + WGPDE R+NK+VFIG+NLD L KGFK CL
Sbjct: 382 VQGMNERFVFQGVHDIFQGSPERLWGPDEPRVNKIVFIGKNLDAKELEKGFKACL 436
>gi|15220146|ref|NP_178163.1| plastid transcriptionally active 17 protein [Arabidopsis thaliana]
gi|6730739|gb|AAF27129.1|AC018849_17 hypothetical protein; 58060-60358 [Arabidopsis thaliana]
gi|48958493|gb|AAT47799.1| At1g80480 [Arabidopsis thaliana]
gi|51536562|gb|AAU05519.1| At1g80480 [Arabidopsis thaliana]
gi|332198289|gb|AEE36410.1| plastid transcriptionally active 17 protein [Arabidopsis thaliana]
Length = 444
Score = 326 bits (836), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 168/297 (56%), Positives = 216/297 (72%), Gaps = 14/297 (4%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV+M+ +L K+G+FDHIVIETTGLA PAP+I+TF +E + V
Sbjct: 147 MLNNGCLCCTVRGDLVRMIGELVNTKKGKFDHIVIETTGLANPAPIIQTFYAEEEIFNDV 206
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD+KHA HL+EVKP VVNEAVEQ+AYADRII+NK DLV E ELGS+ +RI
Sbjct: 207 KLDGVVTLVDAKHARLHLDEVKPEGVVNEAVEQIAYADRIIVNKTDLVGEAELGSVVQRI 266
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVH--------------VDNSHCAT 166
K IN+MA + KYG+VD+D+VLG+GG+DLERI+S V+ + +
Sbjct: 267 KTINSMAQMTRTKYGNVDLDYVLGIGGFDLERIESSVNEDDKGDHHDHDHDHHHDHNHDH 326
Query: 167 HHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGI 226
HH H H H+H HD VSSV+IV EG+LDL++ + WL L+ E+ ED+YRMKG+
Sbjct: 327 DHHHHDGHDHHHHSHDHTHDPGVSSVSIVCEGSLDLEKANMWLGTLLMERSEDIYRMKGL 386
Query: 227 LSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
LSV E+++VFQGVH G P + WG +E+R+NK+VFIG+NL+ L KGFK CL
Sbjct: 387 LSVHTMEERFVFQGVHDIFQGSPDRLWGREEERVNKIVFIGKNLNREELEKGFKACL 443
>gi|449468948|ref|XP_004152183.1| PREDICTED: COBW domain-containing protein 2-like [Cucumis sativus]
gi|449513465|ref|XP_004164332.1| PREDICTED: COBW domain-containing protein 2-like [Cucumis sativus]
Length = 451
Score = 326 bits (835), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 168/303 (55%), Positives = 212/303 (69%), Gaps = 20/303 (6%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV+M+ +L KK+G+FDHIVIETTGLA P+P+I+TF ++ V V
Sbjct: 147 MLNNGCLCCTVRGDLVRMISELVNKKKGKFDHIVIETTGLANPSPIIQTFYAEDSVFNDV 206
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD+KHA HL+EVKP VVNEAVEQ+AYADRII+NK DLV E ++ L +RI
Sbjct: 207 KLDGVVTLVDAKHATFHLDEVKPEGVVNEAVEQIAYADRIIVNKTDLVGEPQIADLVQRI 266
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSH----------------- 163
K IN MA +K KYG VD+D+VLG+GG+DLERIDS V ++
Sbjct: 267 KKINRMAELKRTKYGKVDLDYVLGIGGFDLERIDSSVDTESREDHAHSHHEDHKHSHDHD 326
Query: 164 ---CATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDL 220
H H+ H H+H HD VSSV+IV EG LDL++ + WL L+ + +D+
Sbjct: 327 HDHHHHDHDHEHDHKHDHHSHDHTHDPGVSSVSIVCEGILDLEKANMWLGTLLLDHSDDI 386
Query: 221 YRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
YRMKG+LSV G ++++VFQGVH G P + WGPDE RINK+VFIG+NLD L KGFK
Sbjct: 387 YRMKGLLSVQGMDERFVFQGVHDIFQGSPDRLWGPDEPRINKIVFIGKNLDGEELEKGFK 446
Query: 281 GCL 283
CL
Sbjct: 447 ACL 449
>gi|356536500|ref|XP_003536775.1| PREDICTED: COBW domain-containing protein 2-like isoform 1 [Glycine
max]
Length = 446
Score = 323 bits (829), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 166/304 (54%), Positives = 222/304 (73%), Gaps = 21/304 (6%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV+M+ +L KK+G+FDHIVIETTGLA PAP+I+TF +E + V
Sbjct: 142 MLNNGCLCCTVRGDLVRMISELVAKKKGKFDHIVIETTGLANPAPIIQTFYAEENIFNDV 201
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD+KHA HL+EVKP+ VVNEAVEQ+AYADRII+NK DLV E+++ SL +RI
Sbjct: 202 KLDGVVTLVDAKHAGFHLDEVKPKGVVNEAVEQIAYADRIIVNKTDLVGESDIASLVQRI 261
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSH----------------- 163
+ IN++A +K +YG V++D+VLG+GG+DLERI++ ++ + +
Sbjct: 262 RKINSLANLKRTEYGKVNLDYVLGIGGFDLERIENAINDEGAKEDHDHSHDHEHEHHDHD 321
Query: 164 ----CATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGED 219
H H+ H HH+ H H+H HD VSSV+IV EG+LDL++ + WL L+ ++ ED
Sbjct: 322 HHHHDHDHSHDHKHEHHDHHSHDHSHDPGVSSVSIVCEGSLDLEKANMWLGTLLLDRSED 381
Query: 220 LYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
+YRMKG+LSV G +++VFQGVH G P + WGPDE R+NK+VFIG+NLD L KGF
Sbjct: 382 IYRMKGLLSVQGMNERFVFQGVHDIFQGSPERLWGPDEPRVNKIVFIGKNLDAKELEKGF 441
Query: 280 KGCL 283
K CL
Sbjct: 442 KACL 445
>gi|326492377|dbj|BAK01972.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 448
Score = 323 bits (827), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 170/303 (56%), Positives = 217/303 (71%), Gaps = 20/303 (6%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV+M+ +L KK+G+FDH+VIETTGLA PAP+I+TF ++ V V
Sbjct: 143 MLNNGCLCCTVRGDLVRMIGELVDKKKGKFDHLVIETTGLANPAPIIQTFYAEDAVFNDV 202
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVDSKHA HL+EVKP+ +VNEAV+Q+AYADRII+NK DLV+E E+ SL ERI
Sbjct: 203 KLDGVVTLVDSKHARLHLDEVKPKGIVNEAVQQIAYADRIIINKTDLVSEPEVSSLVERI 262
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVD-------------------- 160
+ IN MA +K A+YG VD+D+VLG+GG+DLERI+S V +
Sbjct: 263 RSINRMANLKRAQYGKVDLDYVLGIGGFDLERIESAVTEEPHDDHEHEHEHKHEHEHHHD 322
Query: 161 NSHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDL 220
+ H HHH H+ H H+H HD VSSV+IV EG +DL++ D WL L+ + +D+
Sbjct: 323 HDHDHDHHHHDHDHKHDHHAHDHTHDPGVSSVSIVCEGEMDLEKADMWLGNLLLARSDDI 382
Query: 221 YRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
YRMKG+LSVSG Q++VFQGVH G P + W P+E RINK+VFIGRNL+ L GFK
Sbjct: 383 YRMKGLLSVSGMPQRFVFQGVHDIFQGSPDRMWEPNEPRINKIVFIGRNLNREELETGFK 442
Query: 281 GCL 283
CL
Sbjct: 443 DCL 445
>gi|356576845|ref|XP_003556540.1| PREDICTED: COBW domain-containing protein 1-like [Glycine max]
Length = 445
Score = 320 bits (819), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 167/304 (54%), Positives = 221/304 (72%), Gaps = 21/304 (6%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV+M+ +L KK+G+FDHIVIETTGLA PAP+I+TF +E + V
Sbjct: 141 MLNNGCLCCTVRGDLVRMISELVAKKKGKFDHIVIETTGLANPAPIIQTFYAEENIFNEV 200
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD+KHA HL+EVKP+ VVNEAVEQ+AYADRII+NK DLV E+++ SL +RI
Sbjct: 201 KLDGVVTLVDAKHAGFHLDEVKPKGVVNEAVEQIAYADRIIVNKTDLVGESDIASLVQRI 260
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNS------------------ 162
+ IN++A +K +YG V++D+VLG+GG+DLERI++ ++ + +
Sbjct: 261 RKINSLANLKRTEYGKVNLDYVLGIGGFDLERIENAINDEGAKEDHDHSHDHEHEHHDHD 320
Query: 163 ---HCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGED 219
H H H+ H HH+ H H+H HD VSSV+IV EG+LDL++ + WL L+ + ED
Sbjct: 321 HHHHDHAHSHDHKHEHHDHHSHDHSHDPGVSSVSIVCEGSLDLEKANMWLGTLLLDHSED 380
Query: 220 LYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
+YRMKG+LSV G +++VFQGVH G P + WGPDE RINK+VFIG+ LD L KGF
Sbjct: 381 IYRMKGLLSVQGMNERFVFQGVHDMFQGSPERLWGPDEPRINKIVFIGKKLDAKELEKGF 440
Query: 280 KGCL 283
K CL
Sbjct: 441 KACL 444
>gi|224128480|ref|XP_002329014.1| predicted protein [Populus trichocarpa]
gi|222839685|gb|EEE78008.1| predicted protein [Populus trichocarpa]
Length = 449
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 166/323 (51%), Positives = 215/323 (66%), Gaps = 49/323 (15%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV+M+ L KK+G+FDHIVIETTGLA PAP+I+TF ++ + V
Sbjct: 135 MLNNGCLCCTVRGDLVRMIADLVNKKKGKFDHIVIETTGLANPAPIIQTFYAEDQIFNDV 194
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD+KHA HL+EVKP VVNEAVEQ+AYADR+I+NK DLV E E+ SL
Sbjct: 195 KLDGVVTLVDAKHAHLHLDEVKPEGVVNEAVEQIAYADRVIVNKTDLVGEQEIASL---- 250
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
+IN MA +K +YG VD+D+VLG+GG+DLERI+S V+ D H ++H H++ H
Sbjct: 251 -NINRMANLKCTQYGKVDLDYVLGIGGFDLERIESAVN-DEDRKEDH---ASHDHNDNHS 305
Query: 181 HN----------------------------------------HMHDSAVSSVTIVSEGTL 200
N H HD VSSV+IV EG+L
Sbjct: 306 QNHAHDHDHAHDHDHAHDHDHHHHHDEHDHKHDHHDGHHSHDHTHDPGVSSVSIVCEGSL 365
Query: 201 DLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRI 260
DL++ + WL L+ E+ ED+YRMKG+LSV G +++VFQGVH +G P + WGP+E R+
Sbjct: 366 DLEKANLWLGTLLMERSEDIYRMKGLLSVQGMNERFVFQGVHDIFEGSPDRLWGPEEPRM 425
Query: 261 NKLVFIGRNLDETALRKGFKGCL 283
NK+VFIG+NLD L+KGFK CL
Sbjct: 426 NKIVFIGKNLDAQELKKGFKACL 448
>gi|302761836|ref|XP_002964340.1| hypothetical protein SELMODRAFT_405512 [Selaginella moellendorffii]
gi|300168069|gb|EFJ34673.1| hypothetical protein SELMODRAFT_405512 [Selaginella moellendorffii]
Length = 448
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 168/299 (56%), Positives = 218/299 (72%), Gaps = 16/299 (5%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV ML +L K+G +DH++IETTGLA PAP+I+TF ++ V+ +
Sbjct: 147 MLNNGCLCCTVRGDLVNMLKELFLTKKGLYDHVLIETTGLANPAPIIQTFYAEDRVAHHY 206
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
+LDGV+T+VD+KHA HL+EVKP VNEAVEQVAYADRIILNK+DLV E + +L+ERI
Sbjct: 207 RLDGVVTMVDAKHAPMHLDEVKPDGAVNEAVEQVAYADRIILNKVDLVDEKAIQTLSERI 266
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-------DSEVHVDNSHC--------- 164
K INAMA VK +YG VDMD+VLGVGG+DLE++ + E N+H
Sbjct: 267 KRINAMASVKSTQYGKVDMDYVLGVGGFDLEKVAGLEVEIEKEKEKANAHAHDDHKHEHG 326
Query: 165 ATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMK 224
H HE H H H H+H HD VSSV+I+ EG LDL+++D WL L++E+ EDLYRMK
Sbjct: 327 HDHEHEHKHEHKHEHKHDHHHDPGVSSVSIMCEGNLDLEKIDTWLGDLLDERSEDLYRMK 386
Query: 225 GILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
GILS+ ++++VFQGVH+ +G + WGP+EKR NKLVFIG+NL+E L++GF CL
Sbjct: 387 GILSIEDCKERFVFQGVHAVYEGTMDREWGPNEKRQNKLVFIGKNLNEAELKQGFMDCL 445
>gi|302768549|ref|XP_002967694.1| hypothetical protein SELMODRAFT_145106 [Selaginella moellendorffii]
gi|300164432|gb|EFJ31041.1| hypothetical protein SELMODRAFT_145106 [Selaginella moellendorffii]
Length = 472
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 160/319 (50%), Positives = 211/319 (66%), Gaps = 39/319 (12%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV ML L K+G +DH++IETTGLA PAP+I+TF ++ V+ +
Sbjct: 154 MLNNGCLCCTVRGDLVNMLKDLFLTKKGLYDHVLIETTGLANPAPIIQTFYAEDRVAHHY 213
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
+LDGV+T+VD+KHA HL+EVKP VNEAVEQVAYADRIILNK+DLV + + +L+ERI
Sbjct: 214 RLDGVVTMVDAKHAPMHLDEVKPDGAVNEAVEQVAYADRIILNKVDLVDDKAIQTLSERI 273
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
K INAMA VK +YG VDMD+VLGVGG+DLE++ ++ +AH H + H
Sbjct: 274 KRINAMASVKSTQYGKVDMDYVLGVGGFDLEKV---AGLEVEIEKEKEKANAHAHDDQHG 330
Query: 181 HNHMHDS------------------------------------AVSSVTIVSEGTLDLDE 204
N S VSSV+I+ EG LDL++
Sbjct: 331 KNLYSFSVSYTRQTKGHDHKHGHEHEHKHEHKHEHKHDHHHDPGVSSVSIMCEGNLDLEK 390
Query: 205 VDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLV 264
+D WL L++E+ EDLYRMKGILS+ ++++VFQGVH+ +G + WGP+EKR NKLV
Sbjct: 391 IDTWLGDLLDERSEDLYRMKGILSIEDCKERFVFQGVHAVYEGTMDREWGPNEKRQNKLV 450
Query: 265 FIGRNLDETALRKGFKGCL 283
FIG+NL+E L++GF CL
Sbjct: 451 FIGKNLNEAELKQGFMDCL 469
>gi|297849990|ref|XP_002892876.1| hypothetical protein ARALYDRAFT_888963 [Arabidopsis lyrata subsp.
lyrata]
gi|297338718|gb|EFH69135.1| hypothetical protein ARALYDRAFT_888963 [Arabidopsis lyrata subsp.
lyrata]
Length = 446
Score = 313 bits (802), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 165/296 (55%), Positives = 213/296 (71%), Gaps = 13/296 (4%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV+M+ +L + K+G+FDHIVIETTGLA PAP+I+TF ++ + V
Sbjct: 150 MLNNGCLCCTVRGDLVRMISELVQTKKGRFDHIVIETTGLANPAPIIQTFYAEDEIFNDV 209
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD+KHA HL+EVKP VNEAVEQ+AYADRII+NK DLV E EL S+ +RI
Sbjct: 210 KLDGVVTLVDAKHARLHLDEVKPEGYVNEAVEQIAYADRIIVNKTDLVGEPELASVMQRI 269
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVH-------------VDNSHCATH 167
K IN+MA +K KYG VD+D+VLG+GG+DLERI+S V+ D+ H
Sbjct: 270 KTINSMAHMKRTKYGKVDLDYVLGIGGFDLERIESSVNEKDHEGHDDHHHDHDHGHHCHD 329
Query: 168 HHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGIL 227
HH HE H H+H HD V+SV+IV EG LDL++ + WL L+ ++ ED+YRMKGIL
Sbjct: 330 HHSEHDHEHEHHSHDHTHDPGVASVSIVCEGDLDLEKANMWLGALLYQRSEDIYRMKGIL 389
Query: 228 SVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
SV ++++VFQGVH +G P + W DE R NK+VFIG+NL+ L GF+ CL
Sbjct: 390 SVQDMDERFVFQGVHEIFEGSPDRLWRKDETRTNKIVFIGKNLNREELEMGFRACL 445
>gi|15218287|ref|NP_173025.1| Cobalamin biosynthesis CobW-like protein [Arabidopsis thaliana]
gi|8927652|gb|AAF82143.1|AC034256_7 Contains similarity to COBW-like protein from Homo sapiens
gb|AF257330 and contains a Viral (Superfamily 1) RNA
helicase PF|01443 domain. EST gb|AI997977 comes from
this genes [Arabidopsis thaliana]
gi|14194111|gb|AAK56250.1|AF367261_1 At1g15730/F7H2_7 [Arabidopsis thaliana]
gi|20334730|gb|AAM16226.1| At1g15730/F7H2_7 [Arabidopsis thaliana]
gi|23397243|gb|AAN31903.1| putative PRLI-interacting factor L [Arabidopsis thaliana]
gi|332191233|gb|AEE29354.1| Cobalamin biosynthesis CobW-like protein [Arabidopsis thaliana]
Length = 448
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 162/298 (54%), Positives = 211/298 (70%), Gaps = 15/298 (5%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV+M+ ++ + K+G+FDHIVIETTGLA PAP+I+TF ++ + V
Sbjct: 150 MLNNGCLCCTVRGDLVRMISEMVQTKKGRFDHIVIETTGLANPAPIIQTFYAEDEIFNDV 209
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD+KHA HL+EVKP VNEAVEQ+AYADRII+NK DLV E EL S+ +RI
Sbjct: 210 KLDGVVTLVDAKHARLHLDEVKPEGYVNEAVEQIAYADRIIVNKTDLVGEPELASVMQRI 269
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSH---------------CA 165
K IN+MA +K KYG VD+D+VLG+GG+DLERI+S V+ +
Sbjct: 270 KTINSMAHMKRTKYGKVDLDYVLGIGGFDLERIESSVNEEEKEDREGHDDHHHGHDCHDH 329
Query: 166 THHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKG 225
+ HE H H H H+H HD V SV+IV EG LDL++ + WL L+ ++ ED+YRMKG
Sbjct: 330 HNEHEHEHEHEHHHSHDHTHDPGVGSVSIVCEGDLDLEKANMWLGALLYQRSEDIYRMKG 389
Query: 226 ILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
ILSV ++++VFQGVH +G P + W DE R NK+VFIG+NL+ L GF+ CL
Sbjct: 390 ILSVQDMDERFVFQGVHEIFEGSPDRLWRKDETRTNKIVFIGKNLNREELEMGFRACL 447
>gi|109289906|gb|AAP45170.2| Dopamine-responsive protein, putative [Solanum bulbocastanum]
Length = 455
Score = 303 bits (775), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 186/299 (62%), Positives = 211/299 (70%), Gaps = 61/299 (20%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAK-------------------KKQGQFDHIVI------ 35
MVNNGCLCCTVRGDLVKMLL+L K KK+ + ++V+
Sbjct: 140 MVNNGCLCCTVRGDLVKMLLELVKNRRDRFDHIVIETTVIRVGKKRETYAYVVLVLCFDI 199
Query: 36 -----------------------------------ETTGLAKPAPVIETFCTDELVSQYV 60
GLAKP PVIETFC+DELVS++V
Sbjct: 200 LSVPDGDSNEIQMLGTWKHFYLFLLSLWSFTVLHEALLGLAKPGPVIETFCSDELVSRHV 259
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD KHA+QHLN VKPRFV NEAVEQVAYADRIILNKIDLVTE+EL LT+RI
Sbjct: 260 KLDGVVTLVDCKHALQHLNRVKPRFVSNEAVEQVAYADRIILNKIDLVTESELELLTKRI 319
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
KHIN MA +K AK+G VDMDFVLGVGGYDL+R+DSEV + SHC H HE H HH+GHH
Sbjct: 320 KHINGMAQIKRAKHGVVDMDFVLGVGGYDLDRVDSEVQSEGSHCG-HKHEDGHEHHKGHH 378
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
H+H+HDSAVSSV+IVSEGTLDLDEVDDWLERLIEE G+DLYRMKG+LSVS SEQ+YVFQ
Sbjct: 379 HDHVHDSAVSSVSIVSEGTLDLDEVDDWLERLIEENGDDLYRMKGVLSVSDSEQRYVFQ 437
>gi|303272321|ref|XP_003055522.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463496|gb|EEH60774.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 446
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/326 (46%), Positives = 211/326 (64%), Gaps = 45/326 (13%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
++NNGCLCCTVRGDLV ML +L K K+G+FDHI+IETTGLA PAP+I+TF + + +
Sbjct: 113 LLNNGCLCCTVRGDLVDMLGRLVKDKKGEFDHILIETTGLANPAPIIQTFYLEPELLDTL 172
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
+LDGV+TLVD+KHA HL+EVKP VVNEA+EQVA+ADR+++NK DLV E+EL ++ R+
Sbjct: 173 RLDGVVTLVDAKHATMHLDEVKPEGVVNEALEQVAFADRLVVNKTDLVNESELRTIENRV 232
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGH-HEGH 179
+ IN +A ++ A+ +VD+DFVLGVGG+DL+R+ V + SH +H HE +HGH H G
Sbjct: 233 RTINQLASIQRAEKANVDLDFVLGVGGFDLDRVQDVVE-EPSHSHSHGHEDSHGHSHAGE 291
Query: 180 HHN-------------------------------------------HMHDSAVSSVTIVS 196
H HD +V+SV++
Sbjct: 292 EETCDKPDCDDPTHSHSHSHSHGGDAKAEADAECEVCGEHGHSHSHHTHDDSVTSVSLTM 351
Query: 197 EGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPD 256
+G +DLD V+DWL L+ ++ +DL+RMKG+L++ G + +YVFQGVH+ +G P + W
Sbjct: 352 DGEVDLDLVNDWLGMLLNDRWQDLFRMKGVLAIEGCDDRYVFQGVHALFEGMPDRLWEDG 411
Query: 257 EKRINKLVFIGRNLDETALRKGFKGC 282
E R +KLVFIG+ LD L+ GF+ C
Sbjct: 412 EPRNSKLVFIGKELDREELKAGFEAC 437
>gi|113208414|gb|AAP45158.2| Dopamine-responsive protein, putative [Solanum bulbocastanum]
Length = 462
Score = 283 bits (723), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 162/203 (79%), Positives = 181/203 (89%), Gaps = 1/203 (0%)
Query: 37 TTGLAKPAPVIETFCTDELVSQYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAY 96
T GLAKP PVIETFC+DELVS++VKLDGV+TLVD KHA+QHLN VKPRFV NEAVEQVAY
Sbjct: 243 TKGLAKPGPVIETFCSDELVSRHVKLDGVVTLVDCKHALQHLNRVKPRFVSNEAVEQVAY 302
Query: 97 ADRIILNKIDLVTETELGSLTERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSE 156
ADRIILNKIDLVTE+EL LT+RIKHIN MA +K AK+G VDMDFVLGVGGYDL+R+DSE
Sbjct: 303 ADRIILNKIDLVTESELELLTKRIKHINGMAQIKRAKHGVVDMDFVLGVGGYDLDRVDSE 362
Query: 157 VHVDNSHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK 216
V + SHC H HE H HH+GHHH+H+HDSAVSSV+IVSEGTLDLDEVDDWLERLIEE
Sbjct: 363 VQSEGSHCG-HKHEDGHEHHKGHHHDHVHDSAVSSVSIVSEGTLDLDEVDDWLERLIEEN 421
Query: 217 GEDLYRMKGILSVSGSEQQYVFQ 239
G+DLYRMKG+LSVS SEQ+YVFQ
Sbjct: 422 GDDLYRMKGVLSVSDSEQRYVFQ 444
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 35/38 (92%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETT 38
MVNNGCLCCTVRGDLVKMLL+L K ++ +FDHIVIETT
Sbjct: 140 MVNNGCLCCTVRGDLVKMLLELVKNRRDRFDHIVIETT 177
>gi|428173826|gb|EKX42726.1| hypothetical protein GUITHDRAFT_158114 [Guillardia theta CCMP2712]
Length = 335
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 194/282 (68%), Gaps = 18/282 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L ++ K+K + D I+IETTG+A PAPVI+TF DE + K
Sbjct: 70 MNNGCICCTVRGDLIRILSKILKRKT-RLDAILIETTGVADPAPVIQTFFMDESIRAQAK 128
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
+D V+T+VD+KH +QHL+E KP V NE++EQV +AD+I+LNKIDLV+E +L + +R++
Sbjct: 129 VDAVLTVVDAKHILQHLDEEKPEGVENESIEQVVFADKILLNKIDLVSEEQLREVQQRLR 188
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+N M+ + + V +D +LG+G +DLERI + ++ + H
Sbjct: 189 QLNRMSEIIPCQMAQVPVDKILGIGAFDLERI---MKMEPDFLSDHE------------- 232
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HMHDSAV+SV I+ EG LDLD+ + W+ L++EKG+D+YR KG+LS+ G + ++VFQGV
Sbjct: 233 -HMHDSAVTSVGIMREGELDLDKTNGWISSLLKEKGQDIYRSKGVLSIKGMDSKFVFQGV 291
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H G P WG DE R+NKLVFIG+NLD L + F+ CL
Sbjct: 292 HMMFQGEPHSPWGKDEVRMNKLVFIGKNLDRQQLNQSFEACL 333
>gi|145348602|ref|XP_001418735.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578965|gb|ABO97028.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 388
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 156/327 (47%), Positives = 213/327 (65%), Gaps = 44/327 (13%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
++NNGCLCCTVR DLV+ML++L K+K+G FDHI+IETTGLA PAP+I+TF + + +
Sbjct: 62 LLNNGCLCCTVRSDLVEMLMRLVKEKKGMFDHILIETTGLANPAPIIQTFYLEPALLDSL 121
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
+LDGV+TLVD+KHA HL+EVKP VVNE++EQVA+ADRI+LNK DLVT+ + +L R+
Sbjct: 122 RLDGVVTLVDAKHAELHLDEVKPAGVVNESLEQVAFADRIVLNKTDLVTDAQANALEYRL 181
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVD---NSHCATHHHESAHG--- 174
+ IN +A + A VD+DFVLGVGG+DLER+ +V D + H H A G
Sbjct: 182 RTINDLAKIGRASMAKVDLDFVLGVGGFDLERVQDQVLPDEPKKTEAHDHGHSHAAGEES 241
Query: 175 -----HHEGHHHNH---------------------------------MHDSAVSSVTIVS 196
H +GH H+H +HD AV SV++
Sbjct: 242 CEKCDHDDGHSHSHGEEHSHSHAHSHGVEADADCEVCGEHGHSHSHHVHDDAVGSVSLSL 301
Query: 197 EGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPD 256
+G LDLD V+DWL L+ E+ EDLYRMKG+L++ G +++YVFQGVH+ +G P +AW D
Sbjct: 302 DGDLDLDLVNDWLGLLLNERWEDLYRMKGVLAIQGCDERYVFQGVHALFEGMPDRAWKAD 361
Query: 257 EKRINKLVFIGRNLDETALRKGFKGCL 283
E R +KLVFIG++LD L++ F+ CL
Sbjct: 362 ETRSSKLVFIGKDLDRAELQRDFEACL 388
>gi|302546725|ref|ZP_07299067.1| cobalamin synthesis protein/P47K family protein [Streptomyces
hygroscopicus ATCC 53653]
gi|302464343|gb|EFL27436.1| cobalamin synthesis protein/P47K family protein [Streptomyces
himastatinicus ATCC 53653]
Length = 340
Score = 276 bits (707), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 140/283 (49%), Positives = 191/283 (67%), Gaps = 18/283 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L ++++ FDHI+IETTGLA PAPV +TF D+ ++ ++
Sbjct: 70 MNNGCICCTVRGDLIRILGALMRRRE-TFDHILIETTGLADPAPVAQTFFMDDEIAAQLR 128
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++TLVD+ H +QHL+EVKP V NEAVEQ+A+ADRI+LNKIDLV ET + +T RI+
Sbjct: 129 LDAIVTLVDAAHVLQHLDEVKPEGVENEAVEQIAFADRIVLNKIDLVDETTIAEVTARIR 188
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN+ + A++ +VD+ VL VG +DLER V D+ T
Sbjct: 189 AINSGVQIIPAQHAAVDLPRVLDVGAFDLER----VLADDPAFLTETE------------ 232
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
H HD+ V+SV I G LD ++ WL L+ KG D++R KGIL+++G+ +QYVFQGV
Sbjct: 233 -HQHDTTVTSVGIDLTGELDEKRLNRWLGTLLRTKGVDIFRSKGILALAGAPRQYVFQGV 291
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H LDG G+ W E+R N+LVFIGRNLD AL +GF CLA
Sbjct: 292 HMLLDGEFGRDWREGEERRNRLVFIGRNLDRDALERGFADCLA 334
>gi|413939343|gb|AFW73894.1| hypothetical protein ZEAMMB73_196871 [Zea mays]
Length = 720
Score = 273 bits (699), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 147/254 (57%), Positives = 188/254 (74%), Gaps = 15/254 (5%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV+M+ +L KK+G+FDHIVIETTGLA PAP+I+TF +++V V
Sbjct: 464 MLNNGCLCCTVRGDLVRMIGELVNKKKGRFDHIVIETTGLANPAPIIQTFYAEDVVFNDV 523
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD+KHA QHL+EVKP+ +VNEAV+Q+AYADRII+NKIDLV E E+ SL ERI
Sbjct: 524 KLDGVVTLVDAKHARQHLDEVKPKGIVNEAVQQIAYADRIIVNKIDLVKEPEVLSLVERI 583
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDN---------------SHCA 165
+ IN MA +K A+YG VD+D+VLG+GG+DLERI+S V + +
Sbjct: 584 RGINHMANLKRAEYGKVDLDYVLGIGGFDLERIESAVAEKSHEDHAEHDHEHHEHENEHD 643
Query: 166 THHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKG 225
HH H+ H H+H HD VSSV+IV EG +DL++ D WL L+ E ED+YRMKG
Sbjct: 644 HDHHHHHDHDHDHHAHDHTHDPGVSSVSIVCEGEMDLEKADMWLGNLLLEHSEDIYRMKG 703
Query: 226 ILSVSGSEQQYVFQ 239
+LSVSG Q++VFQ
Sbjct: 704 LLSVSGMPQRFVFQ 717
>gi|323456981|gb|EGB12847.1| hypothetical protein AURANDRAFT_12944, partial [Aureococcus
anophagefferens]
Length = 332
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/283 (46%), Positives = 186/283 (65%), Gaps = 19/283 (6%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
NGC+CCTVR DLV +L +LAK+ D IVIETTG+A PAPV +TF +E V ++
Sbjct: 66 NGCICCTVRQDLVVVLQKLAKRVAAGELALDGIVIETTGMADPAPVAQTFFVEESVQKFA 125
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
+LDG+ITLVD+KH QHL+E KP NEAVEQVA+ADR+I+NK+DLVT+ +L + +R+
Sbjct: 126 RLDGIITLVDAKHVEQHLDEEKPEGAENEAVEQVAFADRLIVNKVDLVTDDDLARVEQRL 185
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
+ INA AP+ ++ V +D VLG+G +DL + + +D + T
Sbjct: 186 RGINAFAPIVRSERSRVSVDQVLGIGAFDLTKT---LEMDPAFLDTDAE----------- 231
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
H HD +VSSV+I + G + + V+DW+ +++ KG D+YRMKG+LS++G+ +++V+Q
Sbjct: 232 --HEHDDSVSSVSITTPGDVHMLLVNDWISDVLQNKGADIYRMKGVLSIAGAPEKFVYQA 289
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
VH DG AW P E R NKLVFIG+ LD+ AL F GCL
Sbjct: 290 VHMIFDGEFEGAWAPGEARTNKLVFIGKRLDKAALEAAFAGCL 332
>gi|336179243|ref|YP_004584618.1| cobalamin synthesis protein P47K [Frankia symbiont of Datisca
glomerata]
gi|334860223|gb|AEH10697.1| cobalamin synthesis protein P47K [Frankia symbiont of Datisca
glomerata]
Length = 338
Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 133/283 (46%), Positives = 190/283 (67%), Gaps = 19/283 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L ++++ +FDHI+IETTGLA PAPV +TF D+ ++ ++
Sbjct: 72 MNNGCICCTVRGDLIRVLGTLMRRRE-RFDHILIETTGLADPAPVAQTFFVDDEIAGQLR 130
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++TLVD++H +HL++ KP V NEAVEQ+A+ADRI+LNK DLV E EL + RI+
Sbjct: 131 LDAILTLVDARHLARHLDDAKPEGVENEAVEQIAFADRIVLNKTDLVDEAELDEVIVRIR 190
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN +A + A+Y +D+ VL VG +DLER + VD + EG H
Sbjct: 191 AINKVAEILPAQYAKIDLGKVLDVGAFDLER---ALDVDPAFLT-----------EGEHQ 236
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD VSSV I G L + +++DWL L+ KG D++R KG+L+V+G + +YVFQGV
Sbjct: 237 ---HDLTVSSVGIELVGDLSIPKLNDWLGELLSTKGADIFRSKGVLAVAGQQNRYVFQGV 293
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H +G G+ WG + R+++LVFIGR+LD AL G + CLA
Sbjct: 294 HMLFEGTDGQPWG-NAARVSRLVFIGRHLDRAALETGLRRCLA 335
>gi|75906510|ref|YP_320806.1| cobalamin synthesis protein/P47K [Anabaena variabilis ATCC 29413]
gi|75700235|gb|ABA19911.1| Cobalamin synthesis protein/P47K [Anabaena variabilis ATCC 29413]
Length = 323
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/283 (45%), Positives = 185/283 (65%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA PAPVI+TF DE + +
Sbjct: 66 MNNGCICCTVRGDLIRIIGNLMKRRD-KFDHLVIETTGLADPAPVIQTFFVDEDMQSQLS 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+TLVD+KH QH + +EA EQ+A+AD I+LNK DLVT +EL L +RI+
Sbjct: 125 LDAVVTLVDAKHIWQHWD-------ADEAQEQIAFADVILLNKTDLVTLSELDELEKRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A + + + MD +LGV +DL+R + +D + HE
Sbjct: 178 SMNAIAKIYRTRNSELAMDALLGVKAFDLDR---ALEIDPNFLGEDAHE----------- 223
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD VSSV +V EG LD ++++ W+ L+ +G D++RMKGIL+++G + ++VFQGV
Sbjct: 224 ---HDDTVSSVALVQEGELDGEKLNAWISELLRTQGPDIFRMKGILNIAGEDNRFVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG P + W P+EKR N+LVFIGRNLDE L++ F C A
Sbjct: 281 HMIFDGRPDRLWKPNEKRKNELVFIGRNLDEAQLKQDFLACFA 323
>gi|17229243|ref|NP_485791.1| hypothetical protein all1751 [Nostoc sp. PCC 7120]
gi|17130841|dbj|BAB73450.1| all1751 [Nostoc sp. PCC 7120]
Length = 323
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 129/283 (45%), Positives = 184/283 (65%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA PAPVI+TF DE + +
Sbjct: 66 MNNGCICCTVRGDLIRIISNLMKRRD-KFDHLVIETTGLADPAPVIQTFFVDEDMQSQLS 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+TLVD+KH QH + +EA EQ+A+AD I+LNK DLVT +EL L +RI+
Sbjct: 125 LDAVVTLVDAKHIWQHWD-------ADEAQEQIAFADVILLNKTDLVTPSELDELEKRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A + + + MD +LGV +DL+R + +D + HE
Sbjct: 178 SMNAIAKIYRTRNSELAMDALLGVKAFDLDR---ALEIDPNFLGEDAHE----------- 223
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD V SV +V EG LD ++++ W+ L+ +G D++RMKGIL+++G + ++VFQGV
Sbjct: 224 ---HDDTVFSVALVQEGELDGEKLNAWISELLRTQGTDIFRMKGILNIAGEDNRFVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG P + W P+EKR N+LVFIGRNLDE L++ F C A
Sbjct: 281 HMIFDGRPDRLWKPNEKRKNELVFIGRNLDEAQLKQDFLACFA 323
>gi|308806187|ref|XP_003080405.1| Cobalamin synthesis protein (ISS) [Ostreococcus tauri]
gi|116058865|emb|CAL54572.1| Cobalamin synthesis protein (ISS) [Ostreococcus tauri]
Length = 391
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/293 (46%), Positives = 184/293 (62%), Gaps = 14/293 (4%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
++NNGCLCCTVR DLV+ML +L ++K+G FDHI+IETTGLA PAP+I+TF + + +
Sbjct: 102 LLNNGCLCCTVRSDLVEMLARLVREKRGMFDHILIETTGLANPAPIIQTFYLEPALLDSL 161
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
+LDGV+TLVD+KHA HL+EVKPR VVNEA+EQVA+ADRI+LNKIDLV+E + +L R+
Sbjct: 162 RLDGVVTLVDAKHAGLHLDEVKPRGVVNEALEQVAFADRIVLNKIDLVSEKDADALERRL 221
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
+ IN +A ++ A VD+DFVLGVGG+DLER+ +V + H H H H EG
Sbjct: 222 RTINDLAKIRRASKAQVDLDFVLGVGGFDLERVQDQVLGEEKPVGAHDH--GHSHAEGEE 279
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVS---------G 231
D E D + E G R L+ S G
Sbjct: 280 SCEQCDHGHDHGHSHDAHAHAHGEEDC---EICGEHGRPRSRPHQRLARSSPQRPLGRFG 336
Query: 232 SEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+++YVFQGVH+ +G P +AW DEKR +KLVFIG+ LD L++ F+ CL+
Sbjct: 337 CDERYVFQGVHALFEGMPDRAWKSDEKRASKLVFIGKELDRDELQRDFEACLS 389
>gi|427735802|ref|YP_007055346.1| putative GTPase, G3E family [Rivularia sp. PCC 7116]
gi|427370843|gb|AFY54799.1| putative GTPase, G3E family [Rivularia sp. PCC 7116]
Length = 322
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/283 (44%), Positives = 186/283 (65%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA PAPVI+TF DE + + +
Sbjct: 65 MNNGCICCTVRGDLIRIIANLMKRRD-KFDHLVIETTGLADPAPVIQTFFVDEDMQEKLN 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EA EQ+A+AD ++LNK DLV +L L RI+
Sbjct: 124 LDAVVTVVDAKHIWQHWD-------ADEAQEQIAFADVVLLNKTDLVAPEQLEELENRIR 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NAMA + + ++MD +LGV +DL+R + +D + HE
Sbjct: 177 GMNAMAKIYRTRNSELEMDALLGVKAFDLDR---ALEIDPDFLSEDAHE----------- 222
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD V S+ +V +G LD ++++ WL L++ KG D++RMKGIL+++G ++++VFQGV
Sbjct: 223 ---HDETVYSIALVEKGELDGNKLNQWLSNLLQTKGPDIFRMKGILNIAGEDERFVFQGV 279
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H LDG P + W E+R N+LVFIGRNLDET L+K F C+A
Sbjct: 280 HMLLDGKPDRLWKEGEQRKNELVFIGRNLDETQLKKDFLACMA 322
>gi|428206788|ref|YP_007091141.1| cobalamin synthesis protein P47K [Chroococcidiopsis thermalis PCC
7203]
gi|428008709|gb|AFY87272.1| cobalamin synthesis protein P47K [Chroococcidiopsis thermalis PCC
7203]
Length = 323
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 127/282 (45%), Positives = 185/282 (65%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L +++ +FDH+VIETTGLA PAPVI+TF DE + +
Sbjct: 66 MNNGCICCTVRGDLIRIIGNLMRRRD-KFDHLVIETTGLADPAPVIQTFFVDEDMQTQLS 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EA EQ+A+AD I+LNKIDLV+ETEL L RI+
Sbjct: 125 LDAVVTVVDAKHIWQH-------WEADEAQEQIAFADVILLNKIDLVSETELAELERRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A + + + MD +LGV +DL+R + +D + HE
Sbjct: 178 GMNAIAKIYHTRNSELGMDALLGVQAFDLKR---ALEIDPNFLGEDAHE----------- 223
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD V S+ IV GTLD+ +++DWL L++ +G D++RMKGIL+++G + +YVFQGV
Sbjct: 224 ---HDETVGSIAIVEPGTLDMQKLNDWLSYLLQTQGPDIFRMKGILNIAGDDHRYVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H +G + W D++R N+LVFIGRNLD L++ F+ CL
Sbjct: 281 HMLFEGTRDRPWKSDDERKNELVFIGRNLDADKLKEDFRACL 322
>gi|427740049|ref|YP_007059593.1| putative GTPase, G3E family [Rivularia sp. PCC 7116]
gi|427375090|gb|AFY59046.1| putative GTPase, G3E family [Rivularia sp. PCC 7116]
Length = 322
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/283 (45%), Positives = 183/283 (64%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA PAPVI+TF DE + + +
Sbjct: 65 MNNGCICCTVRGDLMRIIGNLMKRRD-KFDHLVIETTGLADPAPVIQTFFVDEDMREQLL 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EA EQ+A+AD I++NK DLV+ +L L RI+
Sbjct: 124 LDAVVTVVDAKHIWQHWD-------ADEAQEQIAFADVILINKTDLVSPEQLEELENRIR 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A + + ++MD +LGV +DL R + +D HE
Sbjct: 177 GMNAIAKIHRTQDAKLEMDALLGVKAFDLNR---ALEIDPEFLGEDAHE----------- 222
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD +V S+ +V EG LD D++D WL L++ +G D++R KGILS++G E ++VFQGV
Sbjct: 223 ---HDESVYSIALVEEGELDGDKLDKWLSNLLQTQGPDIFRTKGILSIAGEENRFVFQGV 279
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H LDG P + W E R N+LVFIGRNLDE LR+ FK C+A
Sbjct: 280 HMLLDGRPDRPWKESETRKNELVFIGRNLDEAKLREEFKACVA 322
>gi|218245725|ref|YP_002371096.1| cobalamin synthesis protein P47K [Cyanothece sp. PCC 8801]
gi|257058771|ref|YP_003136659.1| cobalamin synthesis protein P47K [Cyanothece sp. PCC 8802]
gi|218166203|gb|ACK64940.1| cobalamin synthesis protein P47K [Cyanothece sp. PCC 8801]
gi|256588937|gb|ACU99823.1| cobalamin synthesis protein P47K [Cyanothece sp. PCC 8802]
Length = 323
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/282 (44%), Positives = 186/282 (65%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA PAPVI+TF DE + + +
Sbjct: 66 MNNGCICCTVRGDLIRIISNLMKRRH-KFDHLVIETTGLADPAPVIQTFFVDEDMREKLL 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T++D+KH QH + +EA EQ+A+AD I+LNKIDLV+ EL L +R++
Sbjct: 125 LDAVVTVIDAKHIQQH-------WEADEAQEQIAFADIILLNKIDLVSPEELDRLEKRLR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN MA + + + M+++LG+ +DL + + VD + + HE
Sbjct: 178 GINRMAKIYQTQNTEIAMNYLLGIKAFDL---NYALEVDPNFLSEDAHE----------- 223
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HDS++SSV++V G LDL +V +W+ L+ +G D++RMKGIL++ G +++VFQGV
Sbjct: 224 ---HDSSISSVSLVELGELDLQKVSNWIGELLRTQGTDIFRMKGILNIQGMAERFVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H +D P + W P E R N+LVFIGRNLDE L++ F+ CL
Sbjct: 281 HMLVDAQPDRPWKPQETRKNELVFIGRNLDEMKLKEEFRACL 322
>gi|443326949|ref|ZP_21055587.1| putative GTPase, G3E family [Xenococcus sp. PCC 7305]
gi|442793447|gb|ELS02896.1| putative GTPase, G3E family [Xenococcus sp. PCC 7305]
Length = 322
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 125/283 (44%), Positives = 190/283 (67%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ +L +++ FDH+VIETTGLA PAPVI++F DE++ + +
Sbjct: 65 MNNGCICCTVRGDLIRIISKLLERRDS-FDHLVIETTGLADPAPVIQSFFVDEILYKQTE 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD+K+ H NEA EQ+A+AD I++NKIDLV++ E L ++I+
Sbjct: 124 LDAIVTVVDAKYVHNHWES-------NEAQEQIAFADVILVNKIDLVSDPEREQLIKKIR 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A ++ + ++D+DFVLG+G +DL+ + + +D HE
Sbjct: 177 SLNAIAKIQSTQNCNIDIDFVLGIGAFDLK---NALTIDPQFLDEDAHE----------- 222
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD +V+SV I +EG +D +++ WL +L++ G+D++RMKGIL+V ++++VFQGV
Sbjct: 223 ---HDQSVASVAIANEGIVDGVKLNKWLNQLVQAIGQDIFRMKGILNVDDEDRRFVFQGV 279
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H TLDG PGK W P E R N+LVFIGRNL+E L GF CL
Sbjct: 280 HMTLDGRPGKPWKPTELRNNELVFIGRNLNEAELLSGFLTCLT 322
>gi|255081032|ref|XP_002504082.1| predicted protein [Micromonas sp. RCC299]
gi|226519349|gb|ACO65340.1| predicted protein [Micromonas sp. RCC299]
Length = 335
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 197/290 (67%), Gaps = 24/290 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVR DL+++L +L ++K FDHI+IETTGLA PAPV +TF DE + + +
Sbjct: 63 MNNGCICCTVRQDLIRILNKLMRRKDA-FDHIIIETTGLADPAPVAQTFFVDEDLKEDLY 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLV-TETELGSLTERI 120
LD ++T+VD+ H HL+E+KP V NE+VEQ+A+AD+I+LNKIDL+ ++ + SL ++I
Sbjct: 122 LDAILTVVDAAHLSAHLDEIKPEGVENESVEQIAFADKILLNKIDLLKSDDDKASLVKKI 181
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
+ INA A + +++ +VD+D +LG+ + L D+ + D T
Sbjct: 182 RSINARAAIIESQHSAVDIDSILGIKAFSL---DATLEQDAEFLDTDAE----------- 227
Query: 181 HNHMHDSAVSSVTI-VSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
H HD +V+SV I V++ +D+ +++ WL +L+ +GED++R KGIL+VSG++++YVFQ
Sbjct: 228 --HQHDESVTSVGIEVADAAMDITKLEAWLRKLLSTRGEDIFRSKGILNVSGTDERYVFQ 285
Query: 240 GVHSTLD---GCPGK--AWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
GVH ++ GK WG D+KR+++++FIGRNLD + L GFK C+A
Sbjct: 286 GVHMMMEMSSSAEGKFEGWGKDQKRVSRVIFIGRNLDRSDLESGFKACIA 335
>gi|434389017|ref|YP_007099628.1| putative GTPase, G3E family [Chamaesiphon minutus PCC 6605]
gi|428020007|gb|AFY96101.1| putative GTPase, G3E family [Chamaesiphon minutus PCC 6605]
Length = 332
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 124/282 (43%), Positives = 186/282 (65%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L +++ +FDH+VIETTGLA PAPVI+TF DE V +
Sbjct: 68 MNNGCICCTVRGDLVRIIGNLMRRRD-KFDHLVIETTGLADPAPVIQTFFVDEDVQLETR 126
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH H + +EA EQ+A+ADRI++NK DLVT EL L +I+
Sbjct: 127 LDAVVTVVDAKHIHLHWD-------ADEAQEQIAFADRILINKTDLVTPAELDELERKIR 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
++NA+A + + VDMD +LGVGG+DL ++ + +D H+
Sbjct: 180 NMNAIAKIYRTQNAIVDMDTILGVGGFDL---NNALTIDPDFLGEEAHQ----------- 225
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD +V S+ +V+ G +++ +++ WL L+ +G++++RMKGIL++ G ++++V QGV
Sbjct: 226 ---HDESVGSIALVAPGAMNIQKIEAWLGELLPTQGQNIFRMKGILNIQGQDRRFVLQGV 282
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H +D P +AW DE+R N+LVFIGR+LDE LRK F CL
Sbjct: 283 HMLMDAQPDRAWRADEERKNELVFIGRDLDEAKLRKDFNKCL 324
>gi|428311309|ref|YP_007122286.1| GTPase, G3E family [Microcoleus sp. PCC 7113]
gi|428252921|gb|AFZ18880.1| putative GTPase, G3E family [Microcoleus sp. PCC 7113]
Length = 323
Score = 253 bits (646), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 125/283 (44%), Positives = 182/283 (64%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L +++ +FDH+VIETTGLA PAPVI+TF DE + + +
Sbjct: 66 MNNGCICCTVRGDLIRIIGNLMRRRN-KFDHLVIETTGLADPAPVIQTFFVDEDMREQLS 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH +H + +EA EQ+A+AD I++NK DLVT +L L +RI+
Sbjct: 125 LDAVVTVVDAKHIWEH-------WEADEAQEQIAFADVILINKTDLVTPEQLSELEKRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NAMA + + + MD +LGV +DL+R + +D + HE
Sbjct: 178 AMNAMAKIHHTRNAELGMDALLGVKAFDLQR---ALEIDPEFLSETAHE----------- 223
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD V SV +V G LD +++DWL RL++ +G D++RMKGIL++ G + ++VFQGV
Sbjct: 224 ---HDETVGSVALVESGELDGQKLNDWLSRLLQTQGPDIFRMKGILTIKGEDHRFVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG + W P E R N+LVFIGRNLD+ LR+ F C+A
Sbjct: 281 HMLFDGTRDRPWKPGETRKNELVFIGRNLDKAQLREDFVACMA 323
>gi|218440129|ref|YP_002378458.1| cobalamin synthesis protein P47K [Cyanothece sp. PCC 7424]
gi|218172857|gb|ACK71590.1| cobalamin synthesis protein P47K [Cyanothece sp. PCC 7424]
Length = 323
Score = 253 bits (645), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 127/283 (44%), Positives = 183/283 (64%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA PAPVI+TF DE + + +
Sbjct: 66 MNNGCICCTVRGDLIRIIGNLMKRRN-KFDHLVIETTGLADPAPVIQTFFVDEDMREQLL 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EA EQ+A+AD I+LNK DLV+ L L +RI+
Sbjct: 125 LDAVVTVVDTKHIWQH-------WEADEAQEQIAFADVILLNKTDLVSPDNLEELEQRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+N MA + + ++M+ +LGV +DL R + +D S + H+
Sbjct: 178 GMNPMAKIYRTQNADIEMNSILGVKAFDLNR---ALEIDPSFLSEDAHQ----------- 223
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD +V SV IV G +D ++ +WL L+ KG D++RMKGIL+V+G +Q++VFQGV
Sbjct: 224 ---HDESVYSVAIVDSGIVDGEKFQNWLGELLPTKGTDIFRMKGILNVAGIDQRFVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H +G P + W P+E R N+LVFIGRNLDE L++ FK CL
Sbjct: 281 HMLFEGKPDRPWKPNETRKNELVFIGRNLDEVKLKEDFKACLV 323
>gi|354565698|ref|ZP_08984872.1| cobalamin synthesis protein P47K [Fischerella sp. JSC-11]
gi|353548571|gb|EHC18016.1| cobalamin synthesis protein P47K [Fischerella sp. JSC-11]
Length = 323
Score = 253 bits (645), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 182/282 (64%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA PAPVI+TF DE + Q ++
Sbjct: 66 MNNGCICCTVRGDLIRIISNLMKRRH-KFDHLVIETTGLADPAPVIQTFFVDEDMRQQLE 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EA EQ+A+AD I+LNK DLVT L L RI+
Sbjct: 125 LDAVVTVVDAKHIWQH-------WEADEAQEQIAFADVILLNKTDLVTSDVLDELERRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NAMA + + V MD +LGV +DL R + +D HE
Sbjct: 178 GMNAMAKIYRTRNSEVGMDALLGVKAFDLNR---ALEIDPEFLGEDAHE----------- 223
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD V SV +V+EG LD +++++WL +L++ +G D++RMKGIL+++G + ++VFQGV
Sbjct: 224 ---HDETVYSVALVAEGALDGEKLNNWLGKLLQTQGPDIFRMKGILNIAGEDDRFVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H +G P + W E R N+LVFIGRNLDE L++ F CL
Sbjct: 281 HMIFEGKPDRRWKEGETRKNELVFIGRNLDEAKLKQNFLACL 322
>gi|359460145|ref|ZP_09248708.1| cobalamin synthesis protein/P47K [Acaryochloris sp. CCMEE 5410]
Length = 322
Score = 253 bits (645), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 125/282 (44%), Positives = 180/282 (63%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L +++ +FDH+VIETTGLA PAPVI+TF DE + +
Sbjct: 65 MNNGCICCTVRGDLIRIIGNLMRRRD-KFDHMVIETTGLADPAPVIQTFFVDEDMQTQLN 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EA EQ+A+AD ++LNK DLV+E +L L RI+
Sbjct: 124 LDAVVTVVDAKHIHQHWD-------ADEAQEQIAFADVVLLNKTDLVSEADLADLENRIR 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NAM + + +V+M+ +LGV +DL+R + +D HE
Sbjct: 177 SMNAMTKIYRTQDAAVEMESILGVSAFDLDR---ALEIDPEFLGEDAHE----------- 222
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD V SV + G +D + ++ WL L++ KG D++RMKGIL+++G +Q++VFQGV
Sbjct: 223 ---HDETVGSVALTESGEIDGERLNGWLGNLLQTKGPDIFRMKGILNIAGEDQRFVFQGV 279
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H DG + W E R N+LVFIGRNLDE LRKGF+ CL
Sbjct: 280 HMLFDGRADRPWKASETRKNELVFIGRNLDEDQLRKGFQACL 321
>gi|427729011|ref|YP_007075248.1| putative GTPase, G3E family [Nostoc sp. PCC 7524]
gi|427364930|gb|AFY47651.1| putative GTPase, G3E family [Nostoc sp. PCC 7524]
Length = 323
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 127/283 (44%), Positives = 180/283 (63%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA PAPVI+TF DE + +
Sbjct: 66 MNNGCICCTVRGDLIRIIGNLMKRRD-KFDHLVIETTGLADPAPVIQTFFVDEDMQSQMS 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VDSKH QH + +EA EQ+A+AD I+LNK DLV EL L +RI+
Sbjct: 125 LDAVVTVVDSKHIWQH-------WEADEAQEQIAFADVILLNKTDLVAPAELDELEKRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A + + + MD +LGV +DL R + +D + HE
Sbjct: 178 SMNAIAKIYRTRNSELSMDALLGVQAFDLAR---ALEIDPNFLGEDAHE----------- 223
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD V S+ +V EG LD +++ WL L+ +G D++RMKGIL+++G + ++VFQGV
Sbjct: 224 ---HDDTVFSIALVEEGELDGQKLNAWLSELLRTQGPDIFRMKGILNIAGEDNRFVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H LDG P + W EKR N+LVFIGRNL+E L++ F C+A
Sbjct: 281 HMILDGRPDRPWKASEKRKNELVFIGRNLNEAQLKQDFLACMA 323
>gi|384246309|gb|EIE19800.1| cobW-domain-containing protein, partial [Coccomyxa subellipsoidea
C-169]
Length = 354
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/297 (47%), Positives = 193/297 (64%), Gaps = 23/297 (7%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGC+CCTV+ DL+ ML +L ++ +FDH+VIETTGLA P P+IETF + V++
Sbjct: 61 MLNNGCICCTVKEDLLVMLEELVARRD-KFDHVVIETTGLANPKPIIETFRAYQPVAEQY 119
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
LDGV+TLVD+KH QHL+E K VVNEAV QVAYADRIILNK DLV++ EL S+ R+
Sbjct: 120 CLDGVLTLVDAKHVGQHLDEEKEDGVVNEAVAQVAYADRIILNKTDLVSKEELESVERRL 179
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN +A V A+ V D+VLG+GG+DL+R+ E A H AHG+ H
Sbjct: 180 SSINNLAQVVRAQRADVKADYVLGIGGFDLDRVADE--------AAHSEAHAHGNGHEHS 231
Query: 181 HNHMHDSA--------------VSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGI 226
H+H H V+SV++ +G LDLD V+DW+E L+ + EDLYR KG+
Sbjct: 232 HSHDHSHEGHDHSHHDHMHDDKVTSVSVELDGDLDLDLVNDWMEDLLIDSSEDLYRFKGV 291
Query: 227 LSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
L++ G +++FQGVH+ +G PGK W E +++VFIGR+LD LR+G + CL
Sbjct: 292 LAIDGWPDRFIFQGVHAVFEGTPGKPWREGESHKSRMVFIGRDLDAKVLREGLQQCL 348
>gi|158336169|ref|YP_001517343.1| cobalamin synthesis protein/P47K [Acaryochloris marina MBIC11017]
gi|158306410|gb|ABW28027.1| cobalamin synthesis protein/P47K [Acaryochloris marina MBIC11017]
Length = 322
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/282 (43%), Positives = 180/282 (63%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L +++ +FDH+VIETTGLA PAPVI+TF DE + +
Sbjct: 65 MNNGCICCTVRGDLIRIIGNLMRRRD-KFDHMVIETTGLADPAPVIQTFFVDEDMQTQLN 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD+KH QH + +EA EQ+A+AD ++LNK DLV+E +L L RI+
Sbjct: 124 LDAIVTVVDAKHIHQHWD-------ADEAQEQIAFADVVLLNKTDLVSEADLADLENRIR 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NAM + + +V+M+ +LGV +DL+R + +D HE
Sbjct: 177 SMNAMTKIYRTQDAAVEMESILGVSAFDLDR---ALEIDPEFLGEDAHE----------- 222
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD V SV + G +D + ++ WL L++ KG D++RMKGIL+++G +Q++VFQGV
Sbjct: 223 ---HDETVGSVALTESGEIDGERLNGWLGNLLQTKGPDIFRMKGILNIAGEDQRFVFQGV 279
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H DG + W E R N+LVFIGRNLDE LRKGF+ CL
Sbjct: 280 HMLFDGRADRPWKASETRKNELVFIGRNLDEDQLRKGFQACL 321
>gi|298493178|ref|YP_003723355.1| cobalamin synthesis protein P47K ['Nostoc azollae' 0708]
gi|298235096|gb|ADI66232.1| cobalamin synthesis protein P47K ['Nostoc azollae' 0708]
Length = 323
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 127/282 (45%), Positives = 182/282 (64%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ QFDH+VIETTGLA PAPVI+TF DE + +
Sbjct: 66 MNNGCICCTVRGDLIRIISNLMKRRD-QFDHLVIETTGLAAPAPVIQTFFLDEDMQSQLA 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EA EQ+A+AD I+LNK DLVT L L +RI+
Sbjct: 125 LDAVVTVVDAKHIWQH-------WEADEAQEQIAFADVILLNKTDLVTPENLEKLEKRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NAMA + + + MD +LGV +DLER + +D + E AH
Sbjct: 178 SMNAMAKIYRTRNSELAMDALLGVKAFDLER---ALEIDPNFLG----EDAH-------- 222
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+HD +V S+ +V +G LD +++ W+ L+ KG D++RMKGIL+++G ++VFQGV
Sbjct: 223 --VHDESVYSLALVEKGALDGQKLNAWMSELLSTKGTDIFRMKGILNIAGENDRFVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H DG P + W +E R N+LVFIGRNLDE L++ F+ C+
Sbjct: 281 HMIFDGRPDRPWKANETRKNELVFIGRNLDEAKLKQDFQACI 322
>gi|443328890|ref|ZP_21057482.1| putative GTPase, G3E family [Xenococcus sp. PCC 7305]
gi|442791435|gb|ELS00930.1| putative GTPase, G3E family [Xenococcus sp. PCC 7305]
Length = 322
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 174/282 (61%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ QFDH+VIETTGLA PAPVI+TF DE + +
Sbjct: 65 MNNGCICCTVRGDLIRIIGNLMKRR-NQFDHLVIETTGLADPAPVIQTFFVDEDMKNKIA 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + EA EQ+A+AD I+LNK DLV+ EL L +IK
Sbjct: 124 LDAVVTVVDAKHIQQH-------WSAEEAQEQIAFADVILLNKTDLVSPQELDDLESKIK 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+N MA + + + MD +LGV +DL+R + +D HE
Sbjct: 177 AMNGMAKIYRTQNSELSMDALLGVQAFDLDR---ALEIDPEFLNEDAHE----------- 222
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD V S IV G LD +++DWL L++ KG D++RMKGIL+++G + VFQGV
Sbjct: 223 ---HDETVKSFAIVESGALDGQKLNDWLSNLLQTKGVDIFRMKGILNIAGESDRLVFQGV 279
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H DG P + W E R N+LVFIGRNLDE LR+ FK CL
Sbjct: 280 HMLFDGKPDRPWKEGETRKNELVFIGRNLDEAELREDFKQCL 321
>gi|307109735|gb|EFN57972.1| hypothetical protein CHLNCDRAFT_142112 [Chlorella variabilis]
Length = 332
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/289 (45%), Positives = 187/289 (64%), Gaps = 25/289 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L +L K+K +FD I+IETTGLA PAPV +TF D+ + V+
Sbjct: 55 MNNGCICCTVRGDLIRILHKLLKRKH-RFDAILIETTGLADPAPVAQTFFVDDDLKDLVR 113
Query: 62 LDGVITLVDSKHAMQHLNEVK-PRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
LD ++T+VD+KH +QHL++ + NEAVEQ+A+ADRI+LNK+DLV++ E ++ +RI
Sbjct: 114 LDAILTVVDAKHILQHLDDAQIEEGAENEAVEQLAFADRILLNKVDLVSQKEKAAVVKRI 173
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
K INA A + D+D VLG+ + L+RI E EG
Sbjct: 174 KGINAAAEIIETVNSRADLDRVLGIRAFSLDRI--------------LEEEPDFLDEGAE 219
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
H+H D V+SV I ++G L + WL +L+++KG D++R KGIL GS+ ++VFQG
Sbjct: 220 HSHSSD--VTSVGIDADGNLSFAKAQRWLSKLLQDKGADIFRSKGILCFEGSDDKHVFQG 277
Query: 241 VH------STLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
VH S+ DG G+ WGPDEKR+N+LVFIGRNLD + F+ CL
Sbjct: 278 VHMLLAFSSSADGA-GRPWGPDEKRVNRLVFIGRNLDRDEINASFRSCL 325
>gi|428780805|ref|YP_007172591.1| GTPase, G3E family [Dactylococcopsis salina PCC 8305]
gi|428695084|gb|AFZ51234.1| putative GTPase, G3E family [Dactylococcopsis salina PCC 8305]
Length = 323
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 176/282 (62%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++M+ L K++ +FDH+VIETTG+A PAPVI+TF DE V
Sbjct: 64 MNNGCICCTVRGDLIRMIGNLMKRRD-KFDHLVIETTGIADPAPVIQTFFMDEDVRAETN 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VITL+D+KH QH + EA EQ+A+AD I+LNK DLV+ TEL L RI+
Sbjct: 123 LDAVITLIDAKHIHQHWD-------AEEAQEQIAFADVILLNKTDLVSLTELEDLEGRIR 175
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NAMA + + V MD +LGV ++L+R + VD HE
Sbjct: 176 GMNAMAKIYRTQDAQVAMDDILGVEAFNLDR---ALEVDPDFLGEDAHE----------- 221
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD V SV I G LD D++D W+ L+ +G D++RMKGIL++ G + + VFQGV
Sbjct: 222 ---HDETVKSVVIDETGMLDGDKLDQWVGELLRNQGPDIFRMKGILNIKGEDNRIVFQGV 278
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H DG + W P+E R N+LVFIGRNLDE AL+ GF+ CL
Sbjct: 279 HMLFDGKADRPWLPNETRKNELVFIGRNLDEAALKAGFRNCL 320
>gi|323451848|gb|EGB07724.1| hypothetical protein AURANDRAFT_64741 [Aureococcus anophagefferens]
Length = 343
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/281 (46%), Positives = 182/281 (64%), Gaps = 19/281 (6%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQG--QFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
NGC+CCTVR DLV++L +LA++ + + D IVIETTGLA PAPV +TF D+ V + +
Sbjct: 68 NGCICCTVRQDLVEVLKKLARRSEKGLKLDAIVIETTGLADPAPVAQTFFVDDDVKAFCE 127
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG++TLVD+KH +QHL++ KP NEAVEQVA+ADR+ILNK+DLV EL + R++
Sbjct: 128 LDGIVTLVDAKHVVQHLDDEKPEGAENEAVEQVAFADRLILNKVDLVDGAELDEVERRLR 187
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN APV ++ V +D VLG+ +DL R T + A +G H
Sbjct: 188 DINKFAPVLRSEQSKVSVDQVLGIKAFDLTR-------------TLEMDPAFLDTDGEHE 234
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD+ V+SV I +G +DLD+ + WL L+EEKG D+YRMKG++++ G++ +YV+ V
Sbjct: 235 ---HDATVTSVGISVDGAVDLDKFNAWLGPLVEEKGVDIYRMKGVVAIDGNDDKYVYHAV 291
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
H G WG DE R KL+FIG+NLD+ L +GF+ C
Sbjct: 292 HMIFTGAYSDPWG-DEPRSCKLMFIGKNLDKDGLARGFEEC 331
>gi|359458976|ref|ZP_09247539.1| cobalamin synthesis protein/P47K [Acaryochloris sp. CCMEE 5410]
Length = 333
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/286 (45%), Positives = 187/286 (65%), Gaps = 31/286 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L +++ +FDH+VIETTGLA PAPVI++F DE++ + +
Sbjct: 63 MNNGCICCTVRGDLIRIIGNLMQRRD-RFDHLVIETTGLADPAPVIQSFFVDEVMLRQTQ 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH H +EA EQ+A+AD I+LNK DLV+ L +LT++++
Sbjct: 122 LDAVVTVVDAKHIWDHWES-------SEAQEQIAFADVILLNKQDLVSPEILTALTQQVR 174
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEVHVDNSHCATHHHESAHGHHEG 178
INA+A + + +D+ +LGV ++L ID E +++H
Sbjct: 175 SINAIATLHPTTHCKMDLTQLLGVQAFNLSHALSIDPEFLDEDAH--------------- 219
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HD VSSV I GT+D +++ WL +L++ +G DL+RMKGIL + +++++VF
Sbjct: 220 -----EHDQTVSSVAITETGTVDSVKLNRWLYQLVQARGPDLFRMKGILDMDNADRRFVF 274
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QGVH TLDG PGK W P E R N+LVFIGRNLDET LR GF+ CLA
Sbjct: 275 QGVHMTLDGRPGKPWRPGETRRNELVFIGRNLDETKLRTGFQSCLA 320
>gi|428318950|ref|YP_007116832.1| cobalamin synthesis protein P47K [Oscillatoria nigro-viridis PCC
7112]
gi|428242630|gb|AFZ08416.1| cobalamin synthesis protein P47K [Oscillatoria nigro-viridis PCC
7112]
Length = 323
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 126/282 (44%), Positives = 180/282 (63%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDHIVIETTGLA PAPVI+TF DE + + +
Sbjct: 66 MNNGCICCTVRGDLIRIIGNLMKRRD-KFDHIVIETTGLADPAPVIQTFFVDEDMREKLL 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EA EQ+A+AD ++LNK DLVTE EL L +RI+
Sbjct: 125 LDAVVTVVDAKHIWQHWD-------ADEAQEQIAFADVVLLNKTDLVTEEELAELEKRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NAMA + + + MD +LGV +DL R + ++ H HE
Sbjct: 178 AMNAMAKIHRTRNAELQMDALLGVKAFDLNR---ALEIEPDFLGEHDHE----------- 223
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD V+SV IV G +D ++ DW+E L+ +G +++R KGIL+V+G +++VFQGV
Sbjct: 224 ---HDETVTSVAIVESGAIDGNKFSDWIEELLRTQGPNIFRTKGILNVAGDNKRFVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H DG ++W E N+LVFIGRNL+E LR+ F+ CL
Sbjct: 281 HMVFDGRQDRSWKATETPKNELVFIGRNLNENQLREDFRKCL 322
>gi|428218304|ref|YP_007102769.1| cobalamin synthesis protein P47K [Pseudanabaena sp. PCC 7367]
gi|427990086|gb|AFY70341.1| cobalamin synthesis protein P47K [Pseudanabaena sp. PCC 7367]
Length = 326
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 125/283 (44%), Positives = 191/283 (67%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++++ QFDH+VIETTGLA PAPVI++F TDE++ + +
Sbjct: 63 MNNGCICCTVRGDLIRIISNLMERRE-QFDHLVIETTGLADPAPVIQSFFTDEVLLRQTQ 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH H + +EA EQ+A+AD I+LNK DLV SL ++++
Sbjct: 122 LDAVVTVVDAKHIWDHWDS-------SEAQEQIAFADVILLNKTDLVAAEVRQSLAQKVR 174
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A + + +D++ +LGV +DL+ + + +D HESAH H
Sbjct: 175 GLNAIAKIYQTQNCDLDLNRLLGVQAFDLK---NALSIDPEFL----HESAHEH------ 221
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
D +V S+ I G +D D+++ WL +LI+ +G D++RMKGIL++ +++++VFQGV
Sbjct: 222 ----DESVYSIAITEPGAVDGDKLNRWLYQLIQARGADIFRMKGILNLDNADRRFVFQGV 277
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H TLDG PGK W E R N+LVFIGRNL+E L++GF+ C+A
Sbjct: 278 HMTLDGRPGKPWRSGETRRNELVFIGRNLNEAELKEGFQSCMA 320
>gi|434391598|ref|YP_007126545.1| cobalamin synthesis protein P47K [Gloeocapsa sp. PCC 7428]
gi|428263439|gb|AFZ29385.1| cobalamin synthesis protein P47K [Gloeocapsa sp. PCC 7428]
Length = 323
Score = 250 bits (638), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 121/283 (42%), Positives = 183/283 (64%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L +++ +FDH+VIETTGLA PAPVI+TF DE + +
Sbjct: 66 MNNGCICCTVRGDLIRIIGNLMRRRD-KFDHLVIETTGLADPAPVIQTFFVDEDMQTQLS 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EA EQ+A+AD I+LNK+DLV+E L L RI+
Sbjct: 125 LDAVVTVVDAKHIWQH-------WEADEAQEQIAFADVILLNKVDLVSEDVLEELERRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A + + ++MD +LGV +DL R + +D + HE
Sbjct: 178 GMNAIAKIYRTRNAELEMDTLLGVNAFDLSR---ALEIDPNFLKEDAHE----------- 223
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD + SV +V G L ++++++W+ L++ +G D++RMKGIL+++G + ++VFQGV
Sbjct: 224 ---HDETIGSVALVESGALSMEKLNEWMSYLLQTRGPDIFRMKGILNIAGEDHRFVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H +G + W P+E R N+LVFIGRNLDET LR+ C+A
Sbjct: 281 HMLFEGTRDRRWKPNETRKNELVFIGRNLDETELRENLLACMA 323
>gi|334117176|ref|ZP_08491268.1| cobalamin synthesis protein P47K [Microcoleus vaginatus FGP-2]
gi|333461996|gb|EGK90601.1| cobalamin synthesis protein P47K [Microcoleus vaginatus FGP-2]
Length = 323
Score = 250 bits (638), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 125/282 (44%), Positives = 179/282 (63%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDHIVIETTGLA PAPVI+TF DE + +
Sbjct: 66 MNNGCICCTVRGDLIRIIGNLMKRRD-KFDHIVIETTGLADPAPVIQTFFVDEDMRDKLL 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EA EQ+A+AD +++NK DLVT+ EL L +RI+
Sbjct: 125 LDAVVTVVDAKHIWQHWD-------ADEAQEQIAFADVVLVNKTDLVTDEELAELEKRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NAMA + + + MD +LGV +DL R + ++ H HE
Sbjct: 178 AMNAMAKIYRTRNAELAMDALLGVKAFDLNR---ALEIEPDFLGEHTHE----------- 223
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD +V+SV IV G +D ++ DW+E L+ +G +++R KGIL+V+G Q++VFQGV
Sbjct: 224 ---HDESVTSVAIVESGAIDRNKFSDWMEELLRTQGPNIFRTKGILNVAGDNQRFVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H DG P + W E N+LVFIGR+L+E LR F+ CL
Sbjct: 281 HMVFDGRPDRPWKATETPKNELVFIGRDLNENQLRDDFRKCL 322
>gi|411120910|ref|ZP_11393282.1| putative GTPase, G3E family [Oscillatoriales cyanobacterium JSC-12]
gi|410709579|gb|EKQ67094.1| putative GTPase, G3E family [Oscillatoriales cyanobacterium JSC-12]
Length = 323
Score = 249 bits (637), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 129/285 (45%), Positives = 181/285 (63%), Gaps = 31/285 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA PAPVI+TF DE V
Sbjct: 66 MNNGCICCTVRGDLIRIISNLMKRRD-KFDHLVIETTGLADPAPVIQTFFMDEDVQTQTS 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +E EQ+A+AD I+LNKIDLVT EL L +RI+
Sbjct: 125 LDAVVTVVDAKHIWQH-------WEADEVQEQIAFADVILLNKIDLVTPQELDELEQRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER---IDSEVHVDNSHCATHHHESAHGHHEG 178
++N M + + V M+ +LGV +DL R ID E +ESAH H
Sbjct: 178 NMNVMTKIYRTRNAQVAMEAILGVQAFDLNRALEIDPE----------FLNESAHEH--- 224
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
D +V S+ +V +G LD ++++ WL L++ +G D++RMKGIL+++G + ++VF
Sbjct: 225 -------DESVFSIALVEQGALDGNKLNTWLGELLQTRGPDIFRMKGILNIAGEDCRFVF 277
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH DG + W D +R N+LVFIGRNLDE LR F+ CL
Sbjct: 278 QGVHMLFDGRRDRPWKSDAERKNELVFIGRNLDEAKLRADFRACL 322
>gi|428213716|ref|YP_007086860.1| putative GTPase, G3E family [Oscillatoria acuminata PCC 6304]
gi|428002097|gb|AFY82940.1| putative GTPase, G3E family [Oscillatoria acuminata PCC 6304]
Length = 323
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/282 (45%), Positives = 180/282 (63%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDHI IETTGLA PAPVI+TF DE + +
Sbjct: 66 MNNGCICCTVRGDLIRIIGNLMKRRN-KFDHIAIETTGLADPAPVIQTFFVDEDIQSKLL 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH +QH + +EA EQ+A+AD I+LNKIDLV+E EL L RI+
Sbjct: 125 LDAVVTVVDAKHILQH-------WEASEAQEQIAFADVILLNKIDLVSEAELDELERRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A + + +V+MD +LGV +DL R + +D + HE
Sbjct: 178 GMNAIAKIHRTQDAAVEMDALLGVRAFDLSR---AMEIDPNFLTEDAHE----------- 223
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD V+S+ +V G +D ++V +WL L+ +G D++RMKGIL+++G ++VFQGV
Sbjct: 224 ---HDETVTSIALVEPGAVDGEKVHEWLGELLRTQGTDIFRMKGILNIAGESNRFVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H DG + W E N+LVFIGRNL+E LR GFK CL
Sbjct: 281 HMLFDGNRDRPWKSTETPKNELVFIGRNLNEAELRAGFKRCL 322
>gi|172036403|ref|YP_001802904.1| hypothetical protein cce_1488 [Cyanothece sp. ATCC 51142]
gi|354553188|ref|ZP_08972495.1| cobalamin synthesis protein P47K [Cyanothece sp. ATCC 51472]
gi|171697857|gb|ACB50838.1| hypothetical protein cce_1488 [Cyanothece sp. ATCC 51142]
gi|353555018|gb|EHC24407.1| cobalamin synthesis protein P47K [Cyanothece sp. ATCC 51472]
Length = 323
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/282 (42%), Positives = 184/282 (65%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA PAPVI+TF DE + ++
Sbjct: 66 MNNGCICCTVRGDLIRIISNLMKRR-NKFDHLVIETTGLADPAPVIQTFFVDEDMRDKIQ 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T++D+KH QH + +EA EQ+A+AD I+LNKIDLVT EL L ++++
Sbjct: 125 LDAVVTVIDAKHIEQHWD-------ADEAQEQIAFADIILLNKIDLVTSEELNQLEKKLR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN MA + + + M+++LGV ++L + + +D + + HE
Sbjct: 178 EINRMAKIYQTQNTEIAMNYLLGVQAFNL---NYALEIDPNFLSEDAHE----------- 223
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD++V SV + G LD+++V +W+ L+ +G+D++RMKGIL+++G ++ V QGV
Sbjct: 224 ---HDNSVYSVAFIESGQLDMEKVSNWISNLLRTQGQDIFRMKGILNIAGMNERLVLQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H L+ P + W P+E R N+LVFIGRNLDE L++ K CL
Sbjct: 281 HMLLNAKPDRLWKPEEIRRNELVFIGRNLDEMQLKEELKACL 322
>gi|440681299|ref|YP_007156094.1| cobalamin synthesis protein P47K [Anabaena cylindrica PCC 7122]
gi|428678418|gb|AFZ57184.1| cobalamin synthesis protein P47K [Anabaena cylindrica PCC 7122]
Length = 323
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/283 (44%), Positives = 184/283 (65%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA PAPVI+TF DE + +
Sbjct: 66 MNNGCICCTVRGDLIRIINNLMKRRD-KFDHLVIETTGLADPAPVIQTFFVDEDMQSQLS 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EA EQ+A+AD I+LNK DLVT L L +RI+
Sbjct: 125 LDAVVTVVDAKHIWQH-------WEADEAQEQIAFADVILLNKTDLVTPENLEELEKRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A + + + MD +LGV ++L+R + +D + E AH
Sbjct: 178 SMNAIAKIHRTRNSELGMDALLGVQAFNLDR---ALEIDPNFLG----EDAH-------- 222
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+HD +V SV +V +G +D +++DWL L+ +G D++RMKGIL+++G + ++VFQGV
Sbjct: 223 --VHDESVYSVALVEKGAIDGQKLNDWLGELLRTQGTDIFRMKGILNIAGEDNRFVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG P + W E R N+LVFIGRNLDE+ L++ F CLA
Sbjct: 281 HMIFDGRPDRPWKASETRKNELVFIGRNLDESQLKQDFLACLA 323
>gi|255081180|ref|XP_002507812.1| predicted protein [Micromonas sp. RCC299]
gi|226523088|gb|ACO69070.1| predicted protein [Micromonas sp. RCC299]
Length = 428
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/283 (44%), Positives = 181/283 (63%), Gaps = 19/283 (6%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
NGC+CCTVR DLV +L + A + + D I+IETTG+A PAPV +TF D+ V ++
Sbjct: 74 NGCICCTVRQDLVVVLNKFAGRIASGNLKLDCILIETTGMADPAPVAQTFFVDDSVQEHF 133
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
+LDG++TLVD+KH QHL+E KP NEAVEQVA+ADR+ILNK+DLV + ++ +T R+
Sbjct: 134 RLDGIVTLVDAKHIEQHLDEEKPEGAENEAVEQVAFADRMILNKMDLVDKADVERITARL 193
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
K IN+ AP+ A+ V +D VL + +DL++ V +D T +
Sbjct: 194 KSINSSAPIITAEKSKVSVDLVLDIHAFDLKKT---VDMDPEFLNTDNE----------- 239
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
H HD VSS+ +V + LDLD + W+ L+ KG DLYRMKG+L+V+ SE++++FQ
Sbjct: 240 --HEHDDTVSSICVVEDKPLDLDTLQRWVNYLLVNKGTDLYRMKGVLNVADSEERFMFQA 297
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
VH +G + W P EKR +K VFIG+NLD L++GF C+
Sbjct: 298 VHMIFNGNFDEPWEPSEKRESKFVFIGKNLDHAELKEGFLACI 340
>gi|158334375|ref|YP_001515547.1| cobalamin synthesis protein/P47K [Acaryochloris marina MBIC11017]
gi|158304616|gb|ABW26233.1| cobalamin synthesis protein/P47K [Acaryochloris marina MBIC11017]
Length = 333
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/286 (45%), Positives = 186/286 (65%), Gaps = 31/286 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L +++ +FDH+VIETTGLA PAPVI++F DE++ + +
Sbjct: 63 MNNGCICCTVRGDLIRIIGNLMQRRD-RFDHLVIETTGLADPAPVIQSFFVDEVMLRQTQ 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH H + +EA EQ+A+AD I+LNK DLV+ L +LT+R++
Sbjct: 122 LDAVVTVVDAKHIWDHWDS-------SEAQEQIAFADVILLNKQDLVSPEILTALTQRVR 174
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEVHVDNSHCATHHHESAHGHHEG 178
INA+A + + SVD+ +LGV ++L ID E +++H
Sbjct: 175 SINAIATLHPTTHCSVDLTQLLGVQAFNLSHALSIDPEFLDEDAH--------------- 219
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HD V+SV I GT+D +++ WL +L++ +G DL+RMKGIL + +++++VF
Sbjct: 220 -----EHDQTVTSVAITEMGTVDSVKLNRWLYQLVQARGPDLFRMKGILDMDDADRRFVF 274
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QGVH TLDG PGK W P E R N+LVFIGRNLDE LR F CLA
Sbjct: 275 QGVHMTLDGRPGKPWRPGETRRNELVFIGRNLDEAELRNEFLSCLA 320
>gi|427709725|ref|YP_007052102.1| cobalamin synthesis protein P47K [Nostoc sp. PCC 7107]
gi|427362230|gb|AFY44952.1| cobalamin synthesis protein P47K [Nostoc sp. PCC 7107]
Length = 323
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/283 (44%), Positives = 182/283 (64%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA PAPVI+TF DE + +
Sbjct: 66 MNNGCICCTVRGDLIRIIGNLMKRRD-KFDHLVIETTGLADPAPVIQTFFVDEDMQNQLS 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH H + +EA EQ+A+AD I+LNK DLV EL L +RI+
Sbjct: 125 LDAVVTVVDAKHIWHH-------WEADEAQEQIAFADVILLNKTDLVAPEELEELEKRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A + + + MD +LGV +DL R + +D + E AH
Sbjct: 178 GMNAIAKIYRTRNSELSMDALLGVQAFDLNR---ALEIDPNFLG----EDAH-------- 222
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+HD +V SV +V++G LD +++ W+ L+ +G D++RMKGIL+++G + ++VFQGV
Sbjct: 223 --VHDESVYSVALVAQGALDGEKLHAWMSELLRTQGTDIFRMKGILNIAGEDNRFVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG P + W P E R N+LVFIGRNLDE L++ F CLA
Sbjct: 281 HMIFDGRPDRPWKPSETRKNELVFIGRNLDEAKLKQDFLACLA 323
>gi|119491194|ref|ZP_01623291.1| Cobalamin synthesis [Lyngbya sp. PCC 8106]
gi|119453535|gb|EAW34696.1| Cobalamin synthesis [Lyngbya sp. PCC 8106]
Length = 323
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/282 (43%), Positives = 183/282 (64%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA PAPVI+TF DE + + +
Sbjct: 66 MNNGCICCTVRGDLIRIIGNLMKRRD-KFDHLVIETTGLADPAPVIQTFFVDEDMQEKLL 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EA EQ+A+AD I+LNK+DLV EL L +RIK
Sbjct: 125 LDAVVTVVDAKHIWQH-------WEADEAQEQMAFADIILLNKVDLVKPEELDELEKRIK 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NAMA + + ++M+ +LGV +D++R + +D HE
Sbjct: 178 KMNAMAKIYRTQNAQLEMEALLGVRAFDVKR---ALEIDPEFLNEDAHE----------- 223
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD V SV +V G LD ++++ W+ L++ +G D++RMKGI++++G + +YVFQGV
Sbjct: 224 ---HDETVKSVALVESGELDGEKLNQWIGELLQNQGPDIFRMKGIVNIAGEDHRYVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H +G P + W P E R N+LVFIGRNL+ L++GF+ CL
Sbjct: 281 HMLFNGIPDRPWKPQETRKNELVFIGRNLNAEQLKEGFRQCL 322
>gi|428218942|ref|YP_007103407.1| cobalamin synthesis protein P47K [Pseudanabaena sp. PCC 7367]
gi|427990724|gb|AFY70979.1| cobalamin synthesis protein P47K [Pseudanabaena sp. PCC 7367]
Length = 322
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/282 (43%), Positives = 179/282 (63%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L +++ QFDH+VIETTGLA PAPVI+TF DE + +
Sbjct: 65 MNNGCICCTVRGDLIRIIGNLMQRRD-QFDHLVIETTGLADPAPVIQTFFVDEEIKAQLD 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH H + +EA EQ+A+AD I+LNK DLV+ +L L ++I+
Sbjct: 124 LDAVVTVVDTKHIWDHWDS-------DEAQEQIAFADVILLNKTDLVSAAQLAELEQKIR 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+ + K V MD +LGV +DLER + +D HE
Sbjct: 177 EMNALVKLFHTKQCDVSMDAILGVKAFDLER---ALEIDPQFLGEDAHE----------- 222
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD +V S I G LDL++++ W+ L++++G +++RMKGIL+++G ++++VFQGV
Sbjct: 223 ---HDESVFSFAIAEPGELDLNKLNAWISELLQKQGPNIFRMKGILNIAGEDRRFVFQGV 279
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H +G P + W P E R N+LVFIGR+L E LR FK CL
Sbjct: 280 HMIFEGAPDRQWKPTETRKNELVFIGRDLQEEKLRADFKACL 321
>gi|220907326|ref|YP_002482637.1| cobalamin synthesis protein P47K [Cyanothece sp. PCC 7425]
gi|219863937|gb|ACL44276.1| cobalamin synthesis protein P47K [Cyanothece sp. PCC 7425]
Length = 323
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 124/283 (43%), Positives = 182/283 (64%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++++ +FDH+VIETTGLA PAPVI+TF DE V +
Sbjct: 66 MNNGCICCTVRGDLIRIIGNLMRRRE-KFDHLVIETTGLADPAPVIQTFFVDEDVQSQTQ 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EA EQ+A+AD I+LNK DLV L L RI+
Sbjct: 125 LDAVVTVVDAKHIWQH-------WEADEAQEQIAFADVILLNKTDLVEPAVLAELERRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+N +A + + V+M+ +LGV +DL + + +D + HE
Sbjct: 178 GMNRLAKIYRTQNAEVEMEALLGVKAFDLR---NALALDPDFLSDTAHE----------- 223
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD V+SV IV+EG LD ++ W+ L++ +G D++RMKGIL+++G + ++VFQGV
Sbjct: 224 ---HDETVASVAIVAEGALDGQRLNQWIGELLQTQGPDIFRMKGILNIAGEDCRFVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG + W P E R N+LVFIGRNLDE +L++GF+ C+A
Sbjct: 281 HMLFDGQRDRPWKPGESRRNELVFIGRNLDEASLKEGFRACVA 323
>gi|172054943|ref|YP_001806270.1| hypothetical protein cce_4857 [Cyanothece sp. ATCC 51142]
gi|354555306|ref|ZP_08974608.1| cobalamin synthesis protein P47K [Cyanothece sp. ATCC 51472]
gi|171701224|gb|ACB54204.1| hypothetical protein cce_4857 [Cyanothece sp. ATCC 51142]
gi|353552897|gb|EHC22291.1| cobalamin synthesis protein P47K [Cyanothece sp. ATCC 51472]
Length = 322
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 126/282 (44%), Positives = 176/282 (62%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA PAPVI+TF DE + +
Sbjct: 65 MNNGCICCTVRGDLIRIIGNLMKRRN-KFDHLVIETTGLADPAPVIQTFFVDEDMKDQIA 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EA EQ+A+AD I+LNK DLV+ EL L +IK
Sbjct: 124 LDAVVTVVDAKHIQQH-------WEADEAQEQIAFADVILLNKTDLVSPEELDELENKIK 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+N MA + + ++MD +LGV ++L D + +D HE
Sbjct: 177 AMNGMAKIYRTQNSELEMDALLGVKAFNL---DHALEIDPEFLNEAAHE----------- 222
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD V S IV G +D ++++WL L++ KG D++RMKGIL+++G ++VFQGV
Sbjct: 223 ---HDETVKSFAIVESGAIDGQKLNNWLSNLLQTKGVDIFRMKGILNIAGESDRFVFQGV 279
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H DG P + W E R N+LVFIGRNLDE LR+ FK CL
Sbjct: 280 HMLFDGKPDRPWKEGETRKNELVFIGRNLDEAQLREDFKQCL 321
>gi|186683972|ref|YP_001867168.1| cobalamin synthesis protein, P47K [Nostoc punctiforme PCC 73102]
gi|186466424|gb|ACC82225.1| cobalamin synthesis protein, P47K [Nostoc punctiforme PCC 73102]
Length = 323
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 125/283 (44%), Positives = 180/283 (63%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA PAPVI+TF DE + +
Sbjct: 66 MNNGCICCTVRGDLIRIIGNLMKRRD-KFDHLVIETTGLADPAPVIQTFFVDEDLQSQIS 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EA EQ+A+AD I+LNK DLV EL L +RI+
Sbjct: 125 LDAVVTVVDAKHIWQHWD-------ADEAQEQIAFADVILLNKTDLVAPEELDELEKRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A + + + MD +LGV +DL+R + +D E AH
Sbjct: 178 AMNAIAKIYRTQNSELGMDALLGVKAFDLDR---ALEIDPDFLG----EDAH-------- 222
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+HD V SV +V G +D ++++ WL +L+ +G D++RMKGIL+++G + ++VFQGV
Sbjct: 223 --VHDETVYSVALVEAGAVDGEKLNTWLSKLLRTQGPDIFRMKGILNIAGEDNRFVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG P + W P E N+LVFIGRNLD L++ F CLA
Sbjct: 281 HMIFDGKPDRPWKPSETPKNELVFIGRNLDAAQLKQDFLACLA 323
>gi|440802250|gb|ELR23180.1| cobalamin synthesis protein/P47K [Acanthamoeba castellanii str.
Neff]
Length = 480
Score = 246 bits (629), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 123/285 (43%), Positives = 180/285 (63%), Gaps = 24/285 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L +L K+K +FD+++IETTGLA PAP+ +TF D +S
Sbjct: 215 MNNGCICCTVRGDLIRILRELVKQKD-KFDYVLIETTGLADPAPIAQTFFMDPKLSLQFV 273
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VD+KH +QHL+EVKP V NE+VEQV +ADRI+L+K+DLV ++ +R+
Sbjct: 274 LDGIITVVDAKHILQHLDEVKPDGVENESVEQVGFADRILLSKLDLVDAECEQAVRKRLA 333
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI---DSEVHVDNSHCATHHHESAHGHHEG 178
INA + G VD+ +L + +DL++I D + +D
Sbjct: 334 QINAAVEIIPVNKGVVDLAKILNIKAFDLDKILDMDPQFLLD------------------ 375
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H HD +VSSV + EG D+D+++ WL + + KG D++RMKG+++V G ++++VF
Sbjct: 376 --QEHQHDQSVSSVGLTIEGEADMDKINSWLGKTLRTKGNDIFRMKGVIAVKGWKEKFVF 433
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
GVH +G W +EKR N+LVFIGRNLD L FK C
Sbjct: 434 HGVHMMFEGSQIGKWAKNEKRENRLVFIGRNLDREELWASFKACF 478
>gi|427420995|ref|ZP_18911178.1| putative GTPase, G3E family [Leptolyngbya sp. PCC 7375]
gi|425756872|gb|EKU97726.1| putative GTPase, G3E family [Leptolyngbya sp. PCC 7375]
Length = 324
Score = 246 bits (629), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 122/282 (43%), Positives = 182/282 (64%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA PAPVI+TF D+ V +
Sbjct: 66 MNNGCICCTVRGDLIRIIGNLMKRRD-KFDHLVIETTGLADPAPVIQTFFVDDEVQLQTR 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD++H QH + EAVEQ+A+AD I+LNKIDLVTE +L L +RI+
Sbjct: 125 LDAVVTVVDARHIWQH-------WEAEEAVEQIAFADVILLNKIDLVTEDQLAELEQRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A + + ++MD +LGV +DL ++ + +D HE
Sbjct: 178 GMNALAKIHRTRDAQIEMDSLLGVSAFDL---NNALQIDPDFLDETAHE----------- 223
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD V S+ +V G LD ++++ W+ L+ + G +++RMKGIL+++G + ++VFQGV
Sbjct: 224 ---HDETVGSIALVESGELDGEKLNAWIGELLRDHGPNIFRMKGILNMAGEDNRFVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H DG + W PDE R N+LVFIGRNL++ L + F+ CL
Sbjct: 281 HMLFDGRQDRPWKPDESRKNELVFIGRNLEQLNLSERFRDCL 322
>gi|119512733|ref|ZP_01631804.1| hypothetical protein N9414_19012 [Nodularia spumigena CCY9414]
gi|119462601|gb|EAW43567.1| hypothetical protein N9414_19012 [Nodularia spumigena CCY9414]
Length = 323
Score = 246 bits (628), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 124/282 (43%), Positives = 178/282 (63%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA PAPVI+TF DE + +
Sbjct: 66 MNNGCICCTVRGDLIRIVGNLMKRRD-KFDHLVIETTGLADPAPVIQTFFVDEDMQSLLS 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EA EQ+A+AD I+LNK DLVT +L L +RI+
Sbjct: 125 LDAVVTVVDAKHIWQHWD-------ADEAQEQIAFADVILLNKTDLVTPEQLEELEKRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A + + + MD +LGV +DL R + +D H+
Sbjct: 178 GMNAIAKIYPTENAQLGMDALLGVKAFDLAR---ALEIDPDFLGEDAHQ----------- 223
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD V S+ V G LD +++ WL L++ +G+D++RMKGIL+++G + +YVFQGV
Sbjct: 224 ---HDEKVYSIAFVESGELDGKKLNAWLSELLQTQGQDIFRMKGILNIAGEDNRYVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H LDG P + W +E R N+LVFIGRNLDE L++ F C
Sbjct: 281 HMILDGKPDRPWKANENRKNELVFIGRNLDEAQLKQDFLACF 322
>gi|282900554|ref|ZP_06308496.1| Cobalamin synthesis protein/P47K [Cylindrospermopsis raciborskii
CS-505]
gi|281194354|gb|EFA69309.1| Cobalamin synthesis protein/P47K [Cylindrospermopsis raciborskii
CS-505]
Length = 323
Score = 246 bits (628), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 125/282 (44%), Positives = 182/282 (64%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA PAPVI+TF DE + +
Sbjct: 66 MNNGCICCTVRGDLIRIIGNLMKRRD-KFDHLVIETTGLADPAPVIQTFFVDEDMQNQLS 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EA EQ+A+AD I+LNK DLV+ L L +RI+
Sbjct: 125 LDAVVTVVDAKHICQH-------WEADEAQEQIAFADVILLNKTDLVSPETLEELEKRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NAMA + + + MD +LGV +DL R + +D + HE
Sbjct: 178 AMNAMAKIYHTQNSQLSMDALLGVRAFDLAR---ALEIDPNFLGEDTHE----------- 223
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD++V SV +V G LD ++++ WL +L+ +G+D++RMKGIL+++G E+++VFQGV
Sbjct: 224 ---HDNSVGSVALVESGALDGEKLNVWLGQLLRNQGQDIFRMKGILNIAGEEERFVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H DG P + W E R N+LVFIGRNLD T L++ F C+
Sbjct: 281 HMIFDGRPDRPWKYSEPRKNQLVFIGRNLDGTKLKQDFLSCM 322
>gi|428779866|ref|YP_007171652.1| GTPase, G3E family [Dactylococcopsis salina PCC 8305]
gi|428694145|gb|AFZ50295.1| putative GTPase, G3E family [Dactylococcopsis salina PCC 8305]
Length = 324
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/283 (43%), Positives = 180/283 (63%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L +++ +FDH+VIETTGLA PAPVI+TF DE + +
Sbjct: 67 MNNGCICCTVRGDLIRIIGNLMQRRD-KFDHLVIETTGLADPAPVIQTFFLDEELQAQMN 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD+KH QH E EQVA+AD I+LNK DLV+ EL +L +RI+
Sbjct: 126 LDAIVTVVDAKHIWQHWES-------EEVQEQVAFADVILLNKTDLVSPEELATLEKRIR 178
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+N + + +Y ++ MD +LGV + LE+ + VD HE
Sbjct: 179 GMNTIVKMYNTQYANIPMDQILGVEAFKLEK---ALDVDPEFLNEEDHE----------- 224
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD ++ S TI ++L++++ WL L++ +G +++RMKGIL+V+G + ++VFQGV
Sbjct: 225 ---HDDSIFSFTITDSREINLEKLNQWLGNLLQTQGPNIFRMKGILNVAGEKNRFVFQGV 281
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H +G P +AW P+E R N+LVFIGRNLD LRK F+ CLA
Sbjct: 282 HMIFEGQPDRAWKPEESRKNELVFIGRNLDPEQLRKEFQTCLA 324
>gi|167524791|ref|XP_001746731.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775001|gb|EDQ88627.1| predicted protein [Monosiga brevicollis MX1]
Length = 424
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 126/287 (43%), Positives = 181/287 (63%), Gaps = 23/287 (8%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CCTVR DL++ L +LA +++ FD++VIETTGLA PAPV +TF DE +SQ LD
Sbjct: 69 NGCICCTVRDDLIQALTRLATERRHMFDYVVIETTGLADPAPVAQTFFVDEKISQLYVLD 128
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIKHI 123
++T VD +H HL E+KP V NEA+EQVA+AD ++LNK DLV+ E+ L +R+ I
Sbjct: 129 SIVTFVDCQHISSHLEEIKPEGVENEAIEQVAFADVLVLNKTDLVSAAEIKELRKRLAGI 188
Query: 124 NAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHHNH 183
NA A + ++ + +D VL + +DLE+ + +D T +H
Sbjct: 189 NATARMLESEQSRIPLDAVLNIRAFDLEKT---LQMDAEFLDT-------------DADH 232
Query: 184 MHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHS 243
+HD +VSSV IV EG + ++DWL ++ KG D++R KGIL++ G+++++VFQGVH
Sbjct: 233 LHDKSVSSVGIVIEGECIPNRLNDWLSEILRTKGADIFRSKGILAMMGTDEKFVFQGVHM 292
Query: 244 TLD-GCPGK------AWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
L+ G G+ W P EKR+NKL FIGRNLD L GF+ C+
Sbjct: 293 LLNMGGSGQLGLNLTPWQPGEKRVNKLCFIGRNLDRAELTAGFQACV 339
>gi|434406669|ref|YP_007149554.1| putative GTPase, G3E family [Cylindrospermum stagnale PCC 7417]
gi|428260924|gb|AFZ26874.1| putative GTPase, G3E family [Cylindrospermum stagnale PCC 7417]
Length = 323
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 126/283 (44%), Positives = 183/283 (64%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA PAPVI++F DE + +
Sbjct: 66 MNNGCICCTVRGDLIRIIGNLMKRRD-KFDHLVIETTGLADPAPVIQSFFVDEDLQNKMS 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EA EQ+A+AD I+LNK DLVT L L +RI+
Sbjct: 125 LDAVVTVVDAKHIWQH-------WEADEAQEQIAFADVILLNKTDLVTPEVLEELEKRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A + + MD +LGV +DL+R + +D + E AH
Sbjct: 178 AMNAIAKIYRTHNSELAMDALLGVKAFDLDR---ALEIDPNFLG----EDAH-------- 222
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+HD +V SV +V +G LD ++++DW+ L+ +G D++RMKGIL+++G + ++VFQGV
Sbjct: 223 --VHDESVFSVALVEKGALDGEKLNDWIGELLRTQGPDIFRMKGILNIAGEDNRFVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG P + W E R N+LVFIGRNLDE L++ F CLA
Sbjct: 281 HMIFDGKPDRPWKDSETRKNELVFIGRNLDEAQLKQDFLACLA 323
>gi|443314969|ref|ZP_21044488.1| putative GTPase, G3E family [Leptolyngbya sp. PCC 6406]
gi|442785431|gb|ELR95252.1| putative GTPase, G3E family [Leptolyngbya sp. PCC 6406]
Length = 318
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/282 (43%), Positives = 182/282 (64%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVR DL++++ L ++ G FD+++IETTGLA PAPVI++F DE++ +
Sbjct: 61 MNNGCICCTVRSDLIRIVSNLMERS-GDFDYLMIETTGLADPAPVIQSFFVDEVMRSRLL 119
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD+K+ H + +EA EQ+A+AD I+LNK+DLV+ L L +RI+
Sbjct: 120 LDAIVTVVDAKYIWDHWDS-------SEAQEQIAFADVILLNKVDLVSPPVLEELEQRIR 172
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A ++ ++ + +D VLGVG +DL+ + + +D H+
Sbjct: 173 GMNAIAKIQKTQHCQIPLDTVLGVGAFDLK---NALSIDPEFLDEDAHD----------- 218
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD VSSV I G ++ D + WL +L++ +G DL+RMKGIL + ++++VFQGV
Sbjct: 219 ---HDETVSSVAIQEPGVVNGDHFNRWLYQLVQARGPDLFRMKGILDMDSEDRRFVFQGV 275
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H TLDG PG+ W P E R N+LVFIGRNLDE LR+GF CL
Sbjct: 276 HMTLDGRPGRPWQPGEMRRNELVFIGRNLDEAELRRGFSECL 317
>gi|427717777|ref|YP_007065771.1| cobalamin synthesis protein P47K [Calothrix sp. PCC 7507]
gi|427350213|gb|AFY32937.1| cobalamin synthesis protein P47K [Calothrix sp. PCC 7507]
Length = 323
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 126/282 (44%), Positives = 181/282 (64%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA PAPVI+TF DE + +
Sbjct: 66 MNNGCICCTVRGDLIRIIGNLMKRRD-KFDHLVIETTGLADPAPVIQTFFVDEDLQNQLS 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EA EQ+A+AD I+LNK DLVT L L +RI+
Sbjct: 125 LDAVVTVVDAKHIWQH-------WEADEAQEQIAFADVILLNKTDLVTPEVLEELEKRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A + + +DM+ +LGV +DL+R + +D + E AH
Sbjct: 178 GMNALAKIYHTRNSELDMNALLGVRAFDLDR---ALEIDPNFLG----EDAH-------- 222
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+HD +V SV V G LD ++++ WL L+ +G D++RMKGIL+++G + ++VFQGV
Sbjct: 223 --VHDESVYSVAFVEAGALDGEKLNTWLSELLRTQGVDIFRMKGILNIAGEDNRFVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H DG P + W E R N+LVFIGRNLDE L++ F CL
Sbjct: 281 HMIFDGKPDRPWKDSETRNNQLVFIGRNLDEAKLKQDFLACL 322
>gi|159482488|ref|XP_001699301.1| hypothetical protein CHLREDRAFT_106748 [Chlamydomonas reinhardtii]
gi|158272937|gb|EDO98731.1| predicted protein [Chlamydomonas reinhardtii]
Length = 317
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/284 (44%), Positives = 180/284 (63%), Gaps = 30/284 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
V CLCCTVRGDL+K L L +++ DH++IETTGLA PAP+I +F D + VK
Sbjct: 50 VRQCCLCCTVRGDLIKALNNLYTRRK-DIDHVIIETTGLANPAPIITSFYADPDLPSRVK 108
Query: 62 LDGVITLVDSKHAMQHLN--EVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
LDGV+T+VD+ + +HL+ + P V+EAVEQVAYADR+++NK DLVT +L L R
Sbjct: 109 LDGVVTVVDALNISRHLDTKDADPE-KVSEAVEQVAYADRLLINKTDLVTPKQLSELEGR 167
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGH 179
++ +NA+AP K ++ VD+D+V+GVGGYDL ++ EV
Sbjct: 168 LRAVNALAPFKTSQKSKVDVDYVIGVGGYDLSNVEKEV---------------------- 205
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
+HD VSSV+ +G +DLD+V+ L L+E + ED+YRMKGIL+++GSE ++V+Q
Sbjct: 206 ----VHDDRVSSVSFQFDGEMDLDKVNYSLGFLLETRAEDIYRMKGILAIAGSEYRFVYQ 261
Query: 240 GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
GVH +G P + W P E R K+VFIG+ L R+ F+ CL
Sbjct: 262 GVHQVFEGVPDRKWLPGEPRTCKMVFIGKYLLPEDFREAFESCL 305
>gi|428774235|ref|YP_007166023.1| cobalamin synthesis protein P47K [Cyanobacterium stanieri PCC 7202]
gi|428688514|gb|AFZ48374.1| cobalamin synthesis protein P47K [Cyanobacterium stanieri PCC 7202]
Length = 323
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 125/283 (44%), Positives = 181/283 (63%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDHIVIETTGLA PAPVI+TF DE + + +
Sbjct: 66 MNNGCICCTVRGDLIRIIGNLMKRRH-KFDHIVIETTGLADPAPVIQTFFVDEDMQEKLL 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T++D+KH QH + +EA EQ+A+AD I+LNK DLV+ EL L +IK
Sbjct: 125 LDAVVTVIDAKHIQQHWD-------AHEAEEQIAFADIILLNKTDLVSAEELKELEAKIK 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+N MA + + +V+MD +LGV +DL + + VD HE
Sbjct: 178 GMNRMAKIYHTQNSAVEMDKILGVKAFDL---SNALEVDPEFLGEEAHE----------- 223
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD++V S+ +V E +D +++ W+ ++ +G D++RMKGI++ G +Q+ VFQGV
Sbjct: 224 ---HDNSVYSIAMVEEKPIDTNKLKSWIGEVLRTQGVDIFRMKGIINGQGMDQRLVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG + W P+EKR ++LVFIGRNLDE LRKGF C+A
Sbjct: 281 HMIFDGTIDRPWKPEEKRRSELVFIGRNLDEEGLRKGFLSCIA 323
>gi|254416101|ref|ZP_05029856.1| CobW/P47K family protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196177034|gb|EDX72043.1| CobW/P47K family protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 323
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/282 (43%), Positives = 186/282 (65%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA PAPVI+TF DE + Q +
Sbjct: 66 MNNGCICCTVRGDLMRIIGNLIKRRN-KFDHLVIETTGLADPAPVIQTFFIDEDMRQQLL 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EA EQ+A+AD I+LNK DLV+ +L L +RI+
Sbjct: 125 LDAVVTVVDAKHIWQH-------WEADEAQEQIAFADVILLNKTDLVSPDKLDELEKRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A + + + M+ +LGV +DL R + +D + + HE
Sbjct: 178 GMNALAKIYCTQNSELGMEALLGVKAFDLNR---ALEIDPNFLSEDAHE----------- 223
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD +V S +V +D +++++WL +L++ KG D++RMKGI++++G +Q++VFQGV
Sbjct: 224 ---HDESVHSFALVESKPVDGEKLNNWLSQLLQTKGPDIFRMKGIINMAGEDQRFVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H DG +AW P E+R ++LVFIGRNL+E LR+ F+ CL
Sbjct: 281 HMLFDGRGDRAWKPGERRKSELVFIGRNLEEAKLREDFRACL 322
>gi|449017322|dbj|BAM80724.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 446
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 183/302 (60%), Gaps = 28/302 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGCLCCTVR DLV++L +L + ++D I+IETTG+A P PV++TF DE ++ +++
Sbjct: 149 MNNGCLCCTVRSDLVRILRRLLTRST-KYDGILIETTGMADPTPVVQTFFLDETLADFLR 207
Query: 62 LDGVITLVDSKHAMQHLNEVKPRF-VVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
LDGVIT+VD KH HL+ PR V E VEQ+A+ADR++LNKIDLVT +L E +
Sbjct: 208 LDGVITVVDGKHLAMHLD---PRHGVRRETVEQIAFADRLLLNKIDLVTPAQLREAEETL 264
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHES--------- 171
+ +N AP+ V +D +L + +DLERI D A S
Sbjct: 265 RALNRTAPIIRCVRAEVPIDELLNMRAFDLERITER---DPFFLAMEKTSSEDDHDHHDH 321
Query: 172 ----------AHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLY 221
H +H+HD + SV I G LD+D +++WL + E+GED++
Sbjct: 322 HDHHDHHDDHGEAAPVNGHASHVHDHTIRSVGICEPGDLDVDRLNEWLGGFLSERGEDIF 381
Query: 222 RMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
RMKGILS++G++++++FQGVH + + WG D RIN+LVFIGRNLD A+++ F+
Sbjct: 382 RMKGILSIAGTDRRFIFQGVHMLFESMASEPWGTD-PRINRLVFIGRNLDRQAIQEAFRA 440
Query: 282 CL 283
CL
Sbjct: 441 CL 442
>gi|302851988|ref|XP_002957516.1| hypothetical protein VOLCADRAFT_107727 [Volvox carteri f.
nagariensis]
gi|300257158|gb|EFJ41410.1| hypothetical protein VOLCADRAFT_107727 [Volvox carteri f.
nagariensis]
Length = 347
Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 126/289 (43%), Positives = 187/289 (64%), Gaps = 24/289 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+K+L +L K+K + +H++IETTGLA PAPV +TF D+ V ++ +
Sbjct: 76 MNNGCICCTVRGDLIKILKKLWKRKN-KIEHVLIETTGLADPAPVAQTFFVDDDVQEHYR 134
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD +IT+VD+KH +QHL++ KP V NEAVEQ+A+AD+++LNK+DLV+ E + +RIK
Sbjct: 135 LDAIITVVDAKHLIQHLDDDKPEGVENEAVEQLAFADKVLLNKVDLVSAEEKQEVVKRIK 194
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN+ A + G+ ++ +L + + LERI E +G H
Sbjct: 195 AINSSADIIETVQGNAPLERILEIKAFSLERI-------------LEGEPTFLESDGEHQ 241
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HDS+V+SV + EG +D+ ++D WL ++ EKG D++R KGIL++ G+ + VFQGV
Sbjct: 242 ---HDSSVTSVGLELEGEMDMKKLDSWLGAILREKGTDIFRSKGILAIKGTADKLVFQGV 298
Query: 242 H------STLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H S+ +G GK W E+R+N++VFIGR+LD L F CLA
Sbjct: 299 HMLMGFASSSEGV-GKPWQDGERRVNRIVFIGRHLDRKQLASSFTACLA 346
>gi|303272475|ref|XP_003055599.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463573|gb|EEH60851.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 424
Score = 243 bits (620), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 125/283 (44%), Positives = 176/283 (62%), Gaps = 19/283 (6%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
NGC+CCTVR DLV +L + A + + D ++IETTG+A PAPV +TF D+ V ++
Sbjct: 76 NGCICCTVRQDLVVVLKKFADRVAAGTLKLDAVLIETTGMADPAPVAQTFFVDDEVEKFF 135
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
+LDG++TLVD+KH QHL++ +P V NEAVEQVA+ADRIILNK DLV+E +L + +RI
Sbjct: 136 RLDGIVTLVDAKHVEQHLDDPRPEGVENEAVEQVAFADRIILNKTDLVSEEDLDRVEKRI 195
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
K IN+ + V D VL + +DL++ V +D T +
Sbjct: 196 KTINSSVSIVRTCKSKVSTDSVLDLHAFDLKKT---VEMDPEFLNTENE----------- 241
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
H HD+ VSS+ +V + LDLD + W+ LI KG DLYRMKG+L+++ +++FQ
Sbjct: 242 --HEHDTTVSSLAVVEKRPLDLDSIQTWVNNLIVNKGTDLYRMKGVLNIANCPVRFMFQA 299
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
VH +G + WG DE R +K VFIG+NLD LRKGF+ C+
Sbjct: 300 VHMIFNGEFDEPWGKDEPRESKFVFIGKNLDHKELRKGFEACI 342
>gi|282896299|ref|ZP_06304321.1| Cobalamin synthesis protein/P47K [Raphidiopsis brookii D9]
gi|281198795|gb|EFA73674.1| Cobalamin synthesis protein/P47K [Raphidiopsis brookii D9]
Length = 323
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/282 (43%), Positives = 181/282 (64%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA PAPVI+TF DE + +
Sbjct: 66 MNNGCICCTVRGDLIRIIGNLMKRRD-KFDHLVIETTGLADPAPVIQTFFVDEDMQNQLS 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EA EQ+A+AD I+LNK DLV+ L L +RI+
Sbjct: 125 LDAVVTVVDAKHIWQH-------WEADEAQEQIAFADVILLNKTDLVSSETLEELEKRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NAMA + + + MD +L V +DL R + ++ + HE
Sbjct: 178 AMNAMAKIYHTQNSQLSMDALLDVRAFDLAR---ALEINPNFLGEDTHE----------- 223
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD+++ SV +V G LD ++++ WL +L+ +G+D++RMKGIL+++G E+++VFQGV
Sbjct: 224 ---HDNSIGSVALVESGALDGEKLNVWLGQLLRNQGQDIFRMKGILNIAGEEERFVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H DG P + W E R N+LVFIGRNLD T L++ F C+
Sbjct: 281 HMIFDGRPDRPWKYSEPRKNELVFIGRNLDGTKLKQDFLSCM 322
>gi|307104427|gb|EFN52681.1| hypothetical protein CHLNCDRAFT_138656 [Chlorella variabilis]
Length = 336
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/283 (45%), Positives = 174/283 (61%), Gaps = 45/283 (15%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVR DLV ML L ++ QFD IVIETTGLA+PAP+I+TF + VS +
Sbjct: 96 MLNNGCLCCTVRDDLVSMLNTLYDRRS-QFDRIVIETTGLAQPAPIIQTFFLEPSVSDRM 154
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
+LDGV+TLVD+KH HL+E KP VVNEA+EQ+AYADR++LNK DLV E +L L ERI
Sbjct: 155 RLDGVVTLVDAKHVELHLDEQKPEGVVNEALEQIAYADRVVLNKTDLVAEGDLARLEERI 214
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
+ IN+MA V+ A+ V +D
Sbjct: 215 RGINSMAEVRRAQRADVPVD---------------------------------------- 234
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
H H HD AV SV++ G +DLD+V+ WL LIE K DLYRMKG+L++ ++++ G
Sbjct: 235 HKH-HDDAVGSVSVTIVGDMDLDKVNYWLGGLIEVKSNDLYRMKGVLAIKDFDKRF---G 290
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
VH +G P + W E R++K+VFIG++LD + +GF+ C+
Sbjct: 291 VHMLFEGMPDRPWKEGELRVSKMVFIGKDLDRALIEEGFRECI 333
>gi|443328278|ref|ZP_21056878.1| putative GTPase, G3E family [Xenococcus sp. PCC 7305]
gi|442792124|gb|ELS01611.1| putative GTPase, G3E family [Xenococcus sp. PCC 7305]
Length = 323
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 118/282 (41%), Positives = 176/282 (62%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L +++ +FDH+VIETTGLA PAPVI+TF DE + +
Sbjct: 66 MNNGCICCTVRGDLIRIIGNLMRRRD-KFDHLVIETTGLADPAPVIQTFFVDEEIQAQLN 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH H + +EA EQ+A+A+ I+LNK DLV +L L +RI+
Sbjct: 125 LDAVVTVVDAKHIWSHWDS-------DEAQEQIAFANVILLNKTDLVEPQQLAELEQRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+N M + + + MD VLGV +DL D + ++ HE
Sbjct: 178 GMNGMVKIYHTQNAEIAMDSVLGVRAFDL---DHALEIEPELLGEDAHE----------- 223
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD +V S IV G +DL++++ WL +L++ +G +++RMKGIL+++G + ++VFQGV
Sbjct: 224 ---HDESVFSFAIVESGAVDLEKLNKWLTKLLQTQGPNIFRMKGILNIAGEDNRFVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H DG P + W +E R N+LVFIGRNLD LR+ F+ C
Sbjct: 281 HMIFDGQPDRPWKSEETRKNELVFIGRNLDSEQLRQDFQACF 322
>gi|168698430|ref|ZP_02730707.1| Cobalamin synthesis protein/P47K [Gemmata obscuriglobus UQM 2246]
Length = 369
Score = 239 bits (611), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 134/314 (42%), Positives = 185/314 (58%), Gaps = 40/314 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K++ +FD+I+IETTG+A P PV +TF D+ V
Sbjct: 65 MNNGCICCTVRGDLIRILGNLMKRRD-KFDYILIETTGMADPGPVAQTFFMDDEVKAKTA 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
+DG++TLVDSKH + H + +E EQ+A+AD I+LNK DLVT EL L + I+
Sbjct: 124 IDGIVTLVDSKHVLLHWDS-------HEVQEQIAFADVILLNKTDLVTPPELDKLEKLIR 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI------------------DSEVHVDNSH 163
+NA A + D+D VL V G+DL+RI D+SH
Sbjct: 177 KMNASAKIHRTTNAKTDLDNVLNVRGFDLDRILEHEPDFLKNGGHSHDHDHEHDDKDHSH 236
Query: 164 CATHHHES-------------AHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLE 210
C H + A G + H+H+HDS+V+SV I G LD+ +++ W+
Sbjct: 237 CDHEHGKCEHDHDHKHEHKTHALGVMKEEEHDHVHDSSVTSVGITLAGDLDVKKLNKWMM 296
Query: 211 RLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNL 270
L++EKG D++RMKG+LS+ ++VFQGVH DG P K WG R NKL+FIGRNL
Sbjct: 297 ELLQEKGPDIFRMKGVLSIKNDPNRFVFQGVHMLFDGRPDKPWG-KTPRSNKLIFIGRNL 355
Query: 271 DETALRKGFKGCLA 284
D AL +GFK CLA
Sbjct: 356 DRGALTEGFKSCLA 369
>gi|443321681|ref|ZP_21050725.1| putative GTPase, G3E family [Gloeocapsa sp. PCC 73106]
gi|442788593|gb|ELR98282.1| putative GTPase, G3E family [Gloeocapsa sp. PCC 73106]
Length = 318
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/285 (43%), Positives = 179/285 (62%), Gaps = 31/285 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L K++ +FDHIVIETTGLA PAPVI+TF DE + +
Sbjct: 61 MNNGCICCTVRGDLVRIIGNLMKRR-NKFDHIVIETTGLADPAPVIQTFFVDEDMRDKIF 119
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EA EQ+A+AD I+LNK DL + + L L +IK
Sbjct: 120 LDAVVTVVDAKHIYQH-------WEADEAQEQIAFADVILLNKTDLASNSALDELENKIK 172
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER---IDSEVHVDNSHCATHHHESAHGHHEG 178
+N MA V + + ++ +LG+ +DL R ID E +++H
Sbjct: 173 DMNRMAKVYRTQNAELPIEAILGLQAFDLNRALEIDPEFLGEDTH--------------- 217
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HD +V S+ IV G LD ++++DWL +L++ +G D++R KGIL+++G + ++VF
Sbjct: 218 -----QHDESVYSIAIVESGALDGEKLNDWLSQLLQTQGPDIFRTKGILNIAGEDSRFVF 272
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH DG + W E R N+LVFIGRNLDE L++ F+ CL
Sbjct: 273 QGVHMLFDGRLDRPWREGETRKNELVFIGRNLDEAQLKEDFRKCL 317
>gi|376005784|ref|ZP_09783187.1| putative GTPase [Arthrospira sp. PCC 8005]
gi|375325833|emb|CCE18940.1| putative GTPase [Arthrospira sp. PCC 8005]
Length = 328
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/282 (42%), Positives = 182/282 (64%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ + FD++VIETTGLA PAPVI++F DE++ Y+
Sbjct: 67 MNNGCICCTVRGDLIRIVTNLVERSE-DFDYLVIETTGLADPAPVIQSFFVDEVMRSYLF 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD+K+ +H + +EA EQ+A+AD I+LNK+DLV+ L L +RI+
Sbjct: 126 LDAIVTVVDAKYIWEHWDS-------SEAQEQIAFADVILLNKVDLVSPPILEELEQRIR 178
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A + ++ + + VLGV +DL+ + + +D HE
Sbjct: 179 GMNAVAKIHSTQHCQLPLTKVLGVRAFDLK---NALSIDPEFLDEQAHE----------- 224
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD VSSV I G ++ ++++ WL +L++ +G D++RMKGIL + ++++VFQGV
Sbjct: 225 ---HDPTVSSVVIQESGVVNGEKLNRWLYQLVQARGPDIFRMKGILDMDDEDRRFVFQGV 281
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H TLDG PG+ W P E R N+LVFIGRNLDE+ L GF C
Sbjct: 282 HMTLDGRPGRPWKPGEVRRNELVFIGRNLDESELWHGFNECF 323
>gi|434395781|ref|YP_007130523.1| cobalamin synthesis protein P47K [Gloeocapsa sp. PCC 7428]
gi|428267418|gb|AFZ33363.1| cobalamin synthesis protein P47K [Gloeocapsa sp. PCC 7428]
Length = 322
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 113/282 (40%), Positives = 186/282 (65%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L +++ +FD +VIETTGLA PAPVI++F DE++ + +
Sbjct: 65 MNNGCICCTVRGDLIRIVNSLMQRRD-KFDCLVIETTGLADPAPVIQSFFVDEIMRSHTE 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VIT++D+KH H + EA EQ+A+AD +++NKIDL+++T+L L +R++
Sbjct: 124 LDAVITVIDAKHIWYHWDSC-------EAQEQIAFADVVLINKIDLISKTQLVELEKRLR 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
INA A + +++D VLG+ +DL+ + + +D + HE
Sbjct: 177 KINAFAKFYYTQNCDLNIDCVLGIEAFDLK---NTLSIDPNFLDEATHE----------- 222
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD ++ SV I GT++ D++ +WL +L + +G++++R+KG+L+V ++++VFQG+
Sbjct: 223 ---HDRSIYSVAIAEMGTVNSDKLTNWLNQLTQTQGQNIFRLKGVLNVDAEDRRFVFQGI 279
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H LDG PG+ W P E R N+L+FIGR+LDE L++ F+ CL
Sbjct: 280 HMLLDGRPGRPWKPGESRRNELIFIGRSLDENQLKQEFRNCL 321
>gi|149375868|ref|ZP_01893635.1| hypothetical protein MDG893_15432 [Marinobacter algicola DG893]
gi|149359748|gb|EDM48205.1| hypothetical protein MDG893_15432 [Marinobacter algicola DG893]
Length = 348
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/293 (42%), Positives = 180/293 (61%), Gaps = 21/293 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++ L L ++ + QFD I+IETTGLA P PV +TF D + +
Sbjct: 62 MNNGCVCCTVRGDLIRTLYSLLERSE-QFDAIIIETTGLADPGPVAQTFFVDTNLQDRLA 120
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD + T+VD+KH L K F EA EQ+A+AD+I+LNK+ LV+ EL S+ + ++
Sbjct: 121 LDSITTVVDAKHIQPTL---KQSF---EAEEQLAFADQIVLNKVSLVSAQELVSIEQALR 174
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERID------------SEVHVDNSHCATHHH 169
IN AP+ A V ++ +LG G +DLERI HV + HCA H
Sbjct: 175 AINPFAPIYRADRADVPLENLLGKGSFDLERITRLESGFLNPGHGEPGHVHDEHCAHGAH 234
Query: 170 ESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSV 229
+H H+GH +H HDS+V+S+ I S+ +D + DWL + E G+D+ R KGI++
Sbjct: 235 GESHDGHDGH--DHTHDSSVTSLVIESDRPMDAQRLSDWLNDYLAENGQDILRAKGIVNA 292
Query: 230 SGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
+G +++ VFQ VH ++G + W PDE+R +++VFIGRNL+ LR G GC
Sbjct: 293 AGDDRRLVFQAVHMMVEGDFQRPWAPDEERRSQMVFIGRNLNHAELRAGLLGC 345
>gi|428220629|ref|YP_007104799.1| putative GTPase, G3E family [Synechococcus sp. PCC 7502]
gi|427993969|gb|AFY72664.1| putative GTPase, G3E family [Synechococcus sp. PCC 7502]
Length = 334
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 130/283 (45%), Positives = 185/283 (65%), Gaps = 13/283 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ +L ++ FDH++IETTGLA PAPVI+TF +D+ V
Sbjct: 65 MNNGCICCTVRGDLIRIITKLMRR---NFDHLLIETTGLADPAPVIQTFFSDDDVKAKTH 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EA EQ+A+AD I+LNKIDLVT L +L +I+
Sbjct: 122 LDAVVTVVDTKHISQHWDS-------SEAQEQIAFADVILLNKIDLVTPEILTALETKIR 174
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A + + V+M +L VG +DL R + +D H HH HHH
Sbjct: 175 SMNAIAKIYHTQSAQVEMSSILDVGAFDLSR---ALEIDPHFLHKEVDHHDHEHHHDHHH 231
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+H HD V SV IV G +D ++++WL++L+ KG D++RMKGIL++ G ++VFQGV
Sbjct: 232 HHEHDQTVKSVAIVESGAMDGIKLNEWLDQLLSTKGADIFRMKGILNIDGEANRFVFQGV 291
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG + W +E R N++VFIGRNL+ET LR+GF GC A
Sbjct: 292 HMIFDGKSDRPWQKEETRKNEIVFIGRNLNETELRQGFLGCKA 334
>gi|424918045|ref|ZP_18341409.1| putative GTPase, G3E family [Rhizobium leguminosarum bv. trifolii
WSM597]
gi|392854221|gb|EJB06742.1| putative GTPase, G3E family [Rhizobium leguminosarum bv. trifolii
WSM597]
Length = 324
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 181/283 (63%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+ + +L + + D I+IET+GLA PAPVI++F DE +++ ++
Sbjct: 60 LNNGCICCTVRGDLIAAIGELLRSGR-PIDRIIIETSGLADPAPVIQSFLLDETLAKRLR 118
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD++H Q L++ +EA+EQ+++AD ++LNKIDL + +L + + ++
Sbjct: 119 LDAIVTVVDARHMKQQLSQ-------DEAMEQISFADVLLLNKIDLESVEDLAATEQHLR 171
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN +A + + V++ VL VG +DL I + +D H HE
Sbjct: 172 GINPLARIIRTRDCKVELPAVLDVGAFDLRNI---LAIDPDILKDHEHE----------- 217
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD ++ V I G LD ++ WL RL++E G DL+R+KG+L+ +++YVF GV
Sbjct: 218 ---HDQSIGCVAIQEFGQLDPAALNIWLNRLVQEIGTDLFRVKGVLNFLDEQRRYVFHGV 274
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H TL+G PGKAWGP EKR+N++VFIGRNL+E LR GF CL+
Sbjct: 275 HMTLEGRPGKAWGPSEKRLNEIVFIGRNLNEAMLRDGFMRCLS 317
>gi|209546781|ref|YP_002278699.1| cobalamin synthesis protein P47K [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209538025|gb|ACI57959.1| cobalamin synthesis protein P47K [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 324
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 180/283 (63%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+ + +L + + D I+IET+GLA PAPVI++F DE +++ ++
Sbjct: 60 LNNGCICCTVRGDLIAAIGELLRSGR-PIDRIIIETSGLADPAPVIQSFLLDETLAKRLR 118
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD++H Q L++ +EA+EQ+++AD ++LNKIDL + +L + + ++
Sbjct: 119 LDAIVTVVDARHMKQQLSQ-------DEAMEQISFADVLLLNKIDLESVEDLAATEQHLR 171
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN +A + + V++ VL VG +DL I + +D H HE
Sbjct: 172 GINPLARIIRTRDCKVELPAVLDVGAFDLRNI---LAIDPDILKDHEHE----------- 217
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD + V I G LD ++ WL RL++E G DL+R+KG+L+ +++YVF GV
Sbjct: 218 ---HDQTIGCVAIQEFGQLDPAALNIWLNRLVQEIGTDLFRVKGVLNFLDEQRRYVFHGV 274
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H TL+G PGKAWGP EKR+N++VFIGRNL+E LR GF CL+
Sbjct: 275 HMTLEGRPGKAWGPSEKRLNEIVFIGRNLNEAMLRDGFMRCLS 317
>gi|443317351|ref|ZP_21046764.1| putative GTPase, G3E family [Leptolyngbya sp. PCC 6406]
gi|442783040|gb|ELR92967.1| putative GTPase, G3E family [Leptolyngbya sp. PCC 6406]
Length = 324
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/282 (42%), Positives = 176/282 (62%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA PAPVI+TF D+ V
Sbjct: 66 MNNGCICCTVRGDLIRIIANLMKRRD-KFDHLVIETTGLADPAPVIQTFFVDDEVQTRTH 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD++H QH + EA EQ+A+AD I+LNK DLVT EL L +RI+
Sbjct: 125 LDAVVTVVDARHIHQH-------WQAEEATEQIAFADVILLNKTDLVTPEELTVLEQRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A + + V++ +LGV +DL D+ + VD + HE
Sbjct: 178 AMNALAKIYSTQNAEVELGAILGVNAFDL---DNALKVDPDFLSETAHE----------- 223
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD V S+ +V G +D +++ WL L+ ++G D++RMKGIL+++G + +YVFQGV
Sbjct: 224 ---HDDTVGSLALVEPGAVDGVKLNQWLGTLLRDRGPDIFRMKGILNIAGEDDRYVFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H +G + W E R N+LVFIGRNL++ L+ F+ CL
Sbjct: 281 HMLFEGRGDRPWRTHESRKNELVFIGRNLEDMNLQDSFRACL 322
>gi|427712105|ref|YP_007060729.1| putative GTPase, G3E family [Synechococcus sp. PCC 6312]
gi|427376234|gb|AFY60186.1| putative GTPase, G3E family [Synechococcus sp. PCC 6312]
Length = 322
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/282 (42%), Positives = 176/282 (62%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L +++ +FDH+VIETTGLA PAPVI+TF D+ V +
Sbjct: 64 MNNGCICCTVRGDLIRIIGNLMRRRD-KFDHLVIETTGLADPAPVIQTFFMDDDVRSQAQ 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH H + +EA+EQ+ +AD I+LNK DLV+ +L L ERI+
Sbjct: 123 LDAVVTVVDTKHIEHHWD-------ADEALEQIGFADIILLNKTDLVSPEQLLRLEERIR 175
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A + + + MD +LGV +DL+R + VD + HE
Sbjct: 176 GMNALAKIYRTQNAEISMDAILGVQAFDLDR---ALEVDPNFLNEVAHE----------- 221
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD V SV I G +D + +D WL L++ +G +++RMKGIL+++G + ++VFQGV
Sbjct: 222 ---HDETVGSVAIRESGEVDGERLDGWLSHLLQTQGANIFRMKGILNLAGEDHRFVFQGV 278
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H DG + W +R N+LVFIGRNLD L +GF+ CL
Sbjct: 279 HMLFDGRADRLWKSPAERKNELVFIGRNLDAAMLTQGFQACL 320
>gi|323453139|gb|EGB09011.1| hypothetical protein AURANDRAFT_60046 [Aureococcus anophagefferens]
Length = 336
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 182/284 (64%), Gaps = 18/284 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVR DL ++L +L + D +++ETTGLA PAPV +TF DE++ + +
Sbjct: 70 MNNGCICCTVRADLSRILNKLLAPGMKELDGVIVETTGLADPAPVAQTFFVDEVLKERAR 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD+KH +QHL E KP V NEAVEQVA+ADRI+LNK DL+ E EL ++ +++
Sbjct: 130 LDALVTVVDAKHIVQHLEEQKPDGVENEAVEQVAFADRILLNKCDLLDEGELAAVESKLR 189
Query: 122 HINAMAPVKLAKYGS-VDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
+N +AP+K + +DFVLGV +DL+++ + ++ T
Sbjct: 190 SLNKVAPLKRCERAKGFALDFVLGVEAFDLKKV---LDIEPDFLDTDGE----------- 235
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
H+HD +++S+ + G LD+ V+ WL L+ ++G +++RMKGIL++ G + ++VFQG
Sbjct: 236 --HVHDDSITSIGLRQAGALDMVRVNAWLTDLLAKEGVNIFRMKGILNIRGQDMKFVFQG 293
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
VH G P + W DE R +++VFIGR+L + +L + CLA
Sbjct: 294 VHMLFSGEPLEPWN-DEPRESRIVFIGRDLKKESLERHLASCLA 336
>gi|170079492|ref|YP_001736127.1| CobW/P47K family protein [Synechococcus sp. PCC 7002]
gi|169887161|gb|ACB00872.1| CobW/P47K family protein [Synechococcus sp. PCC 7002]
Length = 318
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 118/282 (41%), Positives = 184/282 (65%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVR DL++++ L ++ + FD+++IETTGLA PAPVI++F DE++ +
Sbjct: 61 MNNGCICCTVRSDLIRIVSNLMERSE-DFDYLMIETTGLADPAPVIQSFFMDEVMRSRLL 119
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD+K+ +H + +EA EQ+A+AD I+LNK+DLV+ L L +RI+
Sbjct: 120 LDAIVTVVDAKYIWEHWDS-------SEAQEQIAFADVILLNKVDLVSPFILEELEQRIR 172
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A + ++ + +D VLGVG +DL+ + + +D E+AH H
Sbjct: 173 IMNAIAKIHQTQHCKISLDTVLGVGAFDLK---NALSIDPEFL----DEAAHDH------ 219
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
D V+S++I G ++ ++ + WL +L++ +G DL+RMKGIL + + +++VFQGV
Sbjct: 220 ----DETVTSISIQETGVVNGEQFNRWLYQLVQARGPDLFRMKGILDMDNASRRFVFQGV 275
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H TLDG PG+ W E R N+LVFIGR+LDE LR GF CL
Sbjct: 276 HMTLDGRPGRPWQAGETRRNELVFIGRDLDEVELRCGFNECL 317
>gi|399544309|ref|YP_006557617.1| hypothetical protein MRBBS_1266 [Marinobacter sp. BSs20148]
gi|399159641|gb|AFP30204.1| hypothetical protein MRBBS_1266 [Marinobacter sp. BSs20148]
Length = 339
Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 119/284 (41%), Positives = 177/284 (62%), Gaps = 11/284 (3%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++ L L + QFD I+IETTGLA P PV +TF D ++ + +
Sbjct: 64 MNNGCVCCTVRGDLIRTLHSLLDRPT-QFDAIIIETTGLADPGPVAQTFFVDSILQERLV 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD + T+VD+KH L + EA EQ+A+AD+IILNKI LVTE+EL ++ +++
Sbjct: 123 LDSITTVVDAKHIRLALADS------TEAEEQIAFADQIILNKISLVTESELFAIEKKLH 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE-GHH 180
IN P+ A +V ++ +LG G +DLERI +++ + H E H + E
Sbjct: 177 AINPFTPIYRADRAAVSLENILGKGSFDLERI---TRLESGFLSPAHGEPGHVNDEHCEQ 233
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
H+H HDS+V+S+ I S+ +D + DWL + E G D+ R KGI++ +G ++ VFQG
Sbjct: 234 HDHSHDSSVTSLVIESDQPMDAQRLSDWLNEYLAEHGGDILRAKGIINAAGEHRRLVFQG 293
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
VH ++G + WGP+E+R +++VFIGRNL+ L G C A
Sbjct: 294 VHMMVEGDFQQPWGPEERRQSQMVFIGRNLNRAELNAGMAACAA 337
>gi|359795044|ref|ZP_09297709.1| cobalamin synthesis protein P47K [Mesorhizobium alhagi CCNWXJ12-2]
gi|359248621|gb|EHK52357.1| cobalamin synthesis protein P47K [Mesorhizobium alhagi CCNWXJ12-2]
Length = 324
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 114/283 (40%), Positives = 176/283 (62%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVR DL+ + L + D I++ET+GLA PAPVI++F DE++++ ++
Sbjct: 60 LNNGCICCTVRSDLISAIQALLASGR-PIDRIIVETSGLADPAPVIQSFVLDEVLAERLQ 118
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD +IT+VD++H +H+ ++EA+EQ+++AD ++LNK DL ++ L +++
Sbjct: 119 LDAIITVVDARHVERHM-------ALDEAMEQISFADVLLLNKTDLESKESLALTESKLR 171
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
H+N +A + + VD VL +G +DL+ I S +D H HE
Sbjct: 172 HLNPLARIVRTQSSVVDRCAVLDIGAFDLKNILS---IDPDILEEHDHE----------- 217
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD ++ V I G LD + W+ RL++ G+D++RMKG+L G ++YVF GV
Sbjct: 218 ---HDQSIGCVAIREPGALDPTMFNAWMNRLVQASGKDMFRMKGVLQFEGDPRRYVFHGV 274
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H TL+G PGKAW P E+RI+++VFIGRNLD+ +LR GF CLA
Sbjct: 275 HMTLEGRPGKAWMPSEQRISEIVFIGRNLDDRSLRSGFANCLA 317
>gi|254420583|ref|ZP_05034307.1| CobW/P47K family protein [Brevundimonas sp. BAL3]
gi|196186760|gb|EDX81736.1| CobW/P47K family protein [Brevundimonas sp. BAL3]
Length = 381
Score = 233 bits (594), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 130/315 (41%), Positives = 182/315 (57%), Gaps = 42/315 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCTVRGDL++++ L K+++ FD I++ETTGLA P PV +TF DE V
Sbjct: 77 MNNGCVCCTVRGDLIRVVAGLMKRQRPGKPAFDAIIVETTGLADPGPVAQTFFVDEDVKA 136
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+LD V TLVD+KH M L++ K EA EQVA+ADRIILNK+DL T EL ++
Sbjct: 137 KTQLDSVTTLVDAKHVMARLDDSK------EAREQVAFADRIILNKVDLATPEELDAVEA 190
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVD---NSHCATHH------- 168
R++ +N +AP+ A+ +V +D VLG+G +DLERI EV D H A H
Sbjct: 191 RLRALNPLAPIVRAERSNVPLDQVLGLGAFDLERI-LEVQPDFANPPHGADGHVHDEHCG 249
Query: 169 -------------------HESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWL 209
AH H H H + +++ + LD + WL
Sbjct: 250 HDHHHHDHDHGHDHSHGDHSHDAHSHGA---RGHAHQDDIKGISLSLDRPLDGAKFTAWL 306
Query: 210 ERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRN 269
+RL+ E+G+++ R KGI+ V G ++ VFQ VH L+G + WG +E+R ++ VFIGR
Sbjct: 307 DRLLGEQGQNILRAKGIIDVQGENRRLVFQAVHMILEGDLQREWGENERRWSRAVFIGRE 366
Query: 270 LDETALRKGFKGCLA 284
LDE ALR GF+GC A
Sbjct: 367 LDEAALRAGFEGCAA 381
>gi|145354738|ref|XP_001421634.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581872|gb|ABO99927.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 404
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/282 (44%), Positives = 174/282 (61%), Gaps = 18/282 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
V NGC+CCTVRGDLV L +L K QFD ++IETTGLA PAPV +TF D+ + +
Sbjct: 69 VMNGCICCTVRGDLVVALKKLYSK-IAQFDAVIIETTGLADPAPVAQTFFVDDDIREKFV 127
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+ D+KH + L++ KP V NEA EQVA+ADRI+LNK DLV+E EL ++T RIK
Sbjct: 128 LDGIITVTDAKHILTRLDDEKPEGVENEAAEQVAFADRILLNKTDLVSEDELETITGRIK 187
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + +Y VD ++G+ + LE+ T + + EG H
Sbjct: 188 QINPSADIFRCQYSKVDPKNLIGINSFSLEK-------------TLKMDPEFLNTEGEHE 234
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD VSS + G L++++++ W+ +I+ G DL+R KG+LSV+G +Q++VFQGV
Sbjct: 235 ---HDPTVSSTSTKFSGHLNINKLERWIGEIIQTMGADLFRYKGVLSVAGMDQKFVFQGV 291
Query: 242 HSTLDGCPGKA-WGPDEKRINKLVFIGRNLDETALRKGFKGC 282
G A WG DE+R + VFIG+NLD+ AL GF C
Sbjct: 292 GMLFSGGFVDAKWGADEERECRFVFIGKNLDKDALINGFMDC 333
>gi|414076964|ref|YP_006996282.1| cobalamin synthesis protein P47K [Anabaena sp. 90]
gi|413970380|gb|AFW94469.1| cobalamin synthesis protein P47K [Anabaena sp. 90]
Length = 322
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/283 (42%), Positives = 179/283 (63%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA PAPVI+TF DE + +
Sbjct: 65 MNNGCICCTVRGDLIRIIGNLMKRRD-KFDHLVIETTGLADPAPVIQTFFVDEDLQDQLS 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EA EQ+A+AD I+LNK DLVT L L RI+
Sbjct: 124 LDAVVTVVDAKHIWQH-------WEADEAQEQIAFADVILLNKTDLVTPEVLDELETRIR 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NAMA + + M +LG+ ++L D + +D + E AH
Sbjct: 177 SMNAMAKIHRTHNSELAMSALLGIQAFNL---DQALEIDPNFLG----EDAH-------- 221
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+HD +VSSV IV+ G+++ ++++ W+ L+ +G D++RMKGIL++ + ++VFQGV
Sbjct: 222 --VHDESVSSVAIVAAGSVNGEKINAWMSELLRTQGTDIFRMKGILNIEDEDTRFVFQGV 279
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H +G + W +E R N+LVFIGRNLDE L++ F C++
Sbjct: 280 HMIFEGKADRPWKVNETRKNELVFIGRNLDEAKLKEDFFACMS 322
>gi|255081024|ref|XP_002504078.1| predicted protein [Micromonas sp. RCC299]
gi|226519345|gb|ACO65336.1| predicted protein [Micromonas sp. RCC299]
Length = 336
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/288 (43%), Positives = 182/288 (63%), Gaps = 22/288 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L +L +++ +FD IVIETTGLA PAPV +TF D+ + + +
Sbjct: 64 MNNGCICCTVRGDLIRILGKLLNRRE-RFDAIVIETTGLADPAPVAQTFFVDDELKEQLY 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+ D+KH HL+EVKP V NE+VEQVA+AD+I+LNK+DLVT E +L ++I+
Sbjct: 123 LDAILTVADAKHLGSHLDEVKPEGVENESVEQVAFADKILLNKVDLVTPQEKLALVDKIR 182
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN+ A V + VD+ VLG+ +DL + C + EG H
Sbjct: 183 GINSRAAVIECVHARVDVGEVLGIRAFDL----------SVAC---EFDEEFLDVEGEHR 229
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD V+SV I G + + E++ WL L+ KG D++R KGIL V+GS+++ VFQGV
Sbjct: 230 ---HDETVTSVGIRVPGAMVVSELNTWLTSLLRTKGTDIFRSKGILRVAGSDERVVFQGV 286
Query: 242 HSTLD---GCPGK--AWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H T++ GK W E R ++ +FIGRNLD L +GF+ C+A
Sbjct: 287 HMTMEMASSANGKVAGWKEGETRESRFIFIGRNLDREELTEGFRACVA 334
>gi|427702394|ref|YP_007045616.1| GTPase, G3E family [Cyanobium gracile PCC 6307]
gi|427345562|gb|AFY28275.1| putative GTPase, G3E family [Cyanobium gracile PCC 6307]
Length = 328
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/283 (42%), Positives = 169/283 (59%), Gaps = 24/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+ ++ L K++ +FDH+VIETTGLA PAPVI+TF DE + + ++
Sbjct: 70 MNNGCICCTVRGDLIPIIGHLMKRRD-RFDHLVIETTGLADPAPVIQTFFVDEDLREQLR 128
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+TLVD +H QH + E EQ+A+AD ++LNK DLV L ++ +R +
Sbjct: 129 LDAVVTLVDLRHVEQHWDS-------EEVQEQLAFADVLLLNKTDLVAAEALEAIRQRTR 181
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN +A V MD +LGVG ++LER + +D A+ H
Sbjct: 182 AINPLARVIPTCRADAAMDQILGVGAFELER---ALAIDPEFLASDH------------- 225
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+H HD AVSSV + + +++ W++ L+ E+G DL+RMKGIL + G +YVFQ V
Sbjct: 226 DHEHDDAVSSVAFIEARPMSYRKLERWIDGLVSERGPDLFRMKGILQIDGESHRYVFQSV 285
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H +D + W DE V IGR+LDE ALR GF+ C+A
Sbjct: 286 HMLIDSARDRPWRADETPRTDFVIIGRDLDEAALRAGFEACVA 328
>gi|434386523|ref|YP_007097134.1| putative GTPase, G3E family [Chamaesiphon minutus PCC 6605]
gi|428017513|gb|AFY93607.1| putative GTPase, G3E family [Chamaesiphon minutus PCC 6605]
Length = 328
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 179/281 (63%), Gaps = 25/281 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++ + +L +++ QFD ++IETTGLA PAPVI++F DEL+ +
Sbjct: 63 MNNGCICCTVRGDLIRTIGKLLVRRE-QFDALLIETTGLADPAPVIQSFFVDELLHAQTE 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD+KH +H + +EA EQ+A+AD +ILNK DLV+ T L L +RI+
Sbjct: 122 LDAIVTVVDAKHIWEHWDS-------SEAQEQIAFADVVILNKSDLVSPTILDELEQRIR 174
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A + + + +D +LG+ +DL++ + +D HE
Sbjct: 175 SMNAIAKLYRTQNCQIGLDKLLGLKAFDLKQ---ALSIDPQFLTEDAHE----------- 220
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD +++SV I + G+ +V+ WL +L +++G D++RMKGI+++ +++VFQGV
Sbjct: 221 ---HDLSIASVGISTTGSFSSVKVNRWLYQLAQDRGADIFRMKGIVNLDDEARRFVFQGV 277
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
H TLDG PGK W P E R +LVFIGRNLDE L+ F C
Sbjct: 278 HMTLDGRPGKPWQPSEIRRTELVFIGRNLDEQQLKAEFDAC 318
>gi|329888469|ref|ZP_08267067.1| cobalamin synthesis protein cobW C-terminal domain protein
[Brevundimonas diminuta ATCC 11568]
gi|328847025|gb|EGF96587.1| cobalamin synthesis protein cobW C-terminal domain protein
[Brevundimonas diminuta ATCC 11568]
Length = 367
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 126/313 (40%), Positives = 183/313 (58%), Gaps = 36/313 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCTVRGDL++++ L K+++ FD I++ETTGLA P PV +TF D+ V
Sbjct: 61 MNNGCVCCTVRGDLIRVVNGLMKRQRPGKPAFDAIIVETTGLADPGPVAQTFFVDDEVKA 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+LD V LVD+KH M L++ K EA EQVA+ADRIILNKIDLV E L +
Sbjct: 121 KTQLDSVTALVDAKHVMARLDDSK------EAREQVAFADRIILNKIDLVDEAALADVEA 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERI------------DSEVHVDNSHCA- 165
R++ +N +AP+ A+ +V +D VLG+ +DLERI +E HV + HC
Sbjct: 175 RLRALNPLAPIVRAERSNVPLDQVLGLHAFDLERILEVKPDFVNPPHGAEGHVHDEHCGH 234
Query: 166 THHHESAHGHHEGHH--------------HNHMHDSAVSSVTIVSEGTLDLDEVDDWLER 211
H H H H E H H+ + +++ + L+ + WL++
Sbjct: 235 GHDHAEDHVHDEHCGHEHHDHDHDHAHGPRGHAHEDDIKGISLTLDRPLNGAKFTAWLDK 294
Query: 212 LIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLD 271
L+ E+G+++ R KGI+ V G +++ VFQ VH L+G K WG E+R ++ VFIGR+LD
Sbjct: 295 LLGEQGQNILRAKGIIDVQGEDRRLVFQAVHMILEGDLQKPWGDKERRWSRAVFIGRDLD 354
Query: 272 ETALRKGFKGCLA 284
E AL+ GF+ C A
Sbjct: 355 EAALKAGFEACAA 367
>gi|255639810|gb|ACU20198.1| unknown [Glycine max]
Length = 161
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 120/160 (75%), Positives = 137/160 (85%), Gaps = 2/160 (1%)
Query: 126 MAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHHNHMH 185
MA +K AK+GSVDMDFVLGVGGYDLERI+SEV + ++H +S H H HHH+H H
Sbjct: 1 MAQIKQAKFGSVDMDFVLGVGGYDLERIESEVPGECPSSSSHQDDSGHEHKGHHHHHHDH 60
Query: 186 --DSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHS 243
DSAVSSV+IV+EGTLDLDEVDDWLER+IEEKG+DLYRMKG+LSV S+Q+YVFQGVHS
Sbjct: 61 VHDSAVSSVSIVAEGTLDLDEVDDWLERVIEEKGDDLYRMKGVLSVDSSDQRYVFQGVHS 120
Query: 244 TLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
LDGCPGK W P+EKRINKLVFIGRNLDETAL+KGFKGCL
Sbjct: 121 MLDGCPGKTWEPNEKRINKLVFIGRNLDETALKKGFKGCL 160
>gi|389818994|ref|ZP_10209072.1| hypothetical protein A1A1_13637 [Planococcus antarcticus DSM 14505]
gi|388463572|gb|EIM05922.1| hypothetical protein A1A1_13637 [Planococcus antarcticus DSM 14505]
Length = 337
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/286 (43%), Positives = 183/286 (63%), Gaps = 25/286 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA---KKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCTVRGDL+++L L ++ + +FD ++IETTGLA PAPV +TF DEL+SQ
Sbjct: 65 MNNGCICCTVRGDLIRILRTLTFSMEEGKVKFDRVLIETTGLADPAPVAQTFFMDELLSQ 124
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
++D +IT+VDSKH +HL+ +EA EQ+A+AD +ILNK DLV+E EL L +
Sbjct: 125 KFQVDSIITVVDSKHVTRHLDGN------DEAQEQIAFADVLILNKTDLVSEDELNKLEK 178
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
RI +N A A+ ++++ +LG+ +D+ R ++ +D H
Sbjct: 179 RISKMNPAAKRIQARNCEINLNTILGINTFDVTR---KLEID-------------PHFLE 222
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HH+H HD VSSV + LDL +V+ W+ L+ EKGEDL R KGILS+ G +++ VF
Sbjct: 223 DHHDHEHDDRVSSVAFIETKPLDLIKVEQWMSYLVREKGEDLLRYKGILSIRGIDERIVF 282
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QG+H G PG+ W +E R+++LVFIG+NLD+ L + FK C+A
Sbjct: 283 QGLHMLFSGHPGRKWKENESRLSELVFIGKNLDKGELERQFKDCIA 328
>gi|428301140|ref|YP_007139446.1| cobalamin synthesis protein P47K [Calothrix sp. PCC 6303]
gi|428237684|gb|AFZ03474.1| cobalamin synthesis protein P47K [Calothrix sp. PCC 6303]
Length = 326
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/281 (42%), Positives = 180/281 (64%), Gaps = 22/281 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FDH+VIETTGLA P PVI+TF DE + + ++
Sbjct: 66 MNNGCICCTVRGDLIRIIGNLMKRRH-KFDHLVIETTGLADPGPVIQTFFVDEDMKEKLE 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + +EAVEQ+A+AD ++LNK DLV +L L +RI+
Sbjct: 125 LDAVVTVVDAKHISQHWD-------ADEAVEQIAFADVVLLNKTDLVELADLEELEKRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA+A + + ++M+ +LGV +DLER + ++ HH
Sbjct: 178 SMNAIAKIYRTQNAELEMEALLGVKAFDLER---ALEIEPEFLEHHHDHDHD-------- 226
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD +V+SV IV G++D ++++ WL L++ KG D++RMKGIL+++G ++VFQGV
Sbjct: 227 ---HDDSVTSVAIVEPGSVDGEKLNTWLSGLLQTKGPDIFRMKGILNIAGESDRFVFQGV 283
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
H +G P + W +E N+LVFIGRNLD L+ F C
Sbjct: 284 HMLFEGKPDRPWKANETPKNELVFIGRNLDAAELKANFLAC 324
>gi|323450544|gb|EGB06425.1| hypothetical protein AURANDRAFT_12916, partial [Aureococcus
anophagefferens]
Length = 336
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 129/287 (44%), Positives = 174/287 (60%), Gaps = 23/287 (8%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQ-GQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKL 62
NGC+CCTVR DL +L +L K D IVIETTG+A PAPV +TF +E + Q+ KL
Sbjct: 67 NGCICCTVRADLAVVLKKLKLKHDFNPLDGIVIETTGMADPAPVAQTFFVEEEIKQFAKL 126
Query: 63 DGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVT-ETELGSLTERIK 121
DG++TLVD KH +QHL+E KP NEAVEQVA+ADR+ILNK+DLV E E ++ R++
Sbjct: 127 DGIVTLVDVKHIVQHLDEEKPEGAENEAVEQVAFADRLILNKMDLVPDEGERKAVAARLR 186
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN AP+ + V D VL +G +DL+R +D + N+ G HE
Sbjct: 187 AINKFAPIVRCEQSKVSPDQVLNIGAFDLKRTLDMDPEFLNT----------DGEHE--- 233
Query: 181 HNHMHDSAVSSVTI--VSEGT-LDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYV 237
HD++V+S+ I S G+ +DL ++WL+ L+ KG DL+RMKG+L G +Y
Sbjct: 234 ----HDASVTSLGIDLPSPGSAVDLGLYNNWLDGLMRTKGADLFRMKGVLDAVGLPCRYA 289
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
F VH +G + W P+E R KL IG+NLD AL+ GF CLA
Sbjct: 290 FHAVHMIYNGHFIEPWAPNEARSTKLTLIGKNLDHAALKAGFLACLA 336
>gi|197106830|ref|YP_002132207.1| cobalamin biosynthesis protein CobW [Phenylobacterium zucineum
HLK1]
gi|196480250|gb|ACG79778.1| cobalamin biosynthesis protein CobW [Phenylobacterium zucineum
HLK1]
Length = 357
Score = 226 bits (577), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 129/306 (42%), Positives = 188/306 (61%), Gaps = 33/306 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K+K G+FD I++ETTGLA PAPV +TF DE VS +
Sbjct: 61 MNNGCVCCTVRGDLIRVLSGLMKRK-GKFDAIIVETTGLADPAPVAQTFFVDEDVSARTE 119
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V T+VD+KH L + K EA EQ+A+AD+IILNK DLV+E EL + I+
Sbjct: 120 LDSVTTVVDAKHLPLRLKDSK------EAAEQIAFADQIILNKTDLVSEDELAEVERAIR 173
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAH-------- 173
+N +AP+ A+ +V ++ +LG +DL R+ +E+ + + A H E H
Sbjct: 174 TLNPLAPIHRAQRSNVPLEMILGRHAFDLARV-TELQPEFLNPA--HGEPGHVHDEHCGH 230
Query: 174 ---------------GHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGE 218
GH GH H+H+ +S +SS+++ ++ +D + V WL +++ +G
Sbjct: 231 DHHDHGHDHHHGHDHGHDHGHIHDHVAESGISSISLTADRPIDANRVTAWLNNVLQTQGV 290
Query: 219 DLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKG 278
D+ R KGIL + G +++ VFQ VH L+G W DEKR ++LVFIGRNLDE LR G
Sbjct: 291 DILRAKGILDIKGDDRRLVFQAVHMILEGDFQGPWREDEKRYSRLVFIGRNLDEAGLRAG 350
Query: 279 FKGCLA 284
F+ C+A
Sbjct: 351 FESCIA 356
>gi|413939344|gb|AFW73895.1| hypothetical protein ZEAMMB73_196871 [Zea mays]
Length = 628
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 107/157 (68%), Positives = 134/157 (85%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M+NNGCLCCTVRGDLV+M+ +L KK+G+FDHIVIETTGLA PAP+I+TF +++V V
Sbjct: 464 MLNNGCLCCTVRGDLVRMIGELVNKKKGRFDHIVIETTGLANPAPIIQTFYAEDVVFNDV 523
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
KLDGV+TLVD+KHA QHL+EVKP+ +VNEAV+Q+AYADRII+NKIDLV E E+ SL ERI
Sbjct: 524 KLDGVVTLVDAKHARQHLDEVKPKGIVNEAVQQIAYADRIIVNKIDLVKEPEVLSLVERI 583
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEV 157
+ IN MA +K A+YG VD+D+VLG+GG+DLER S V
Sbjct: 584 RGINHMANLKRAEYGKVDLDYVLGIGGFDLERFLSLV 620
>gi|308805096|ref|XP_003079860.1| Cobalamin synthesis protein (ISS) [Ostreococcus tauri]
gi|116058317|emb|CAL53506.1| Cobalamin synthesis protein (ISS) [Ostreococcus tauri]
Length = 431
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/282 (42%), Positives = 174/282 (61%), Gaps = 18/282 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
V NGC+CCTVRGDLV L +L K QFD ++IETTGLA PAPV +TF D+ +
Sbjct: 95 VMNGCICCTVRGDLVVALKKLYSK-IAQFDAVIIETTGLADPAPVAQTFFVDDEIQSKFV 153
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+ D+KH + L++ KP V NEA EQ+A+ADR++LNK DLV++TEL ++ RIK
Sbjct: 154 LDGIITVTDAKHILARLDDEKPEGVENEAAEQIAFADRVLLNKTDLVSDTELKTIETRIK 213
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+N A + +++ VD ++G+ + LE+ T + + EG H
Sbjct: 214 QLNPSAEIYHSEHSKVDPKHLIGINSFSLEK-------------TLKMDPEFLNTEGEHE 260
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD +VSS + EG L++++++ W+ +I+ G DL+R KG+LSV+G +Q++VFQGV
Sbjct: 261 ---HDPSVSSTSAKFEGYLNINKLESWISDIIQTMGADLFRYKGVLSVAGMDQKFVFQGV 317
Query: 242 HSTLDGCPGKA-WGPDEKRINKLVFIGRNLDETALRKGFKGC 282
G A W +E R + VFIG+NLD+ AL GF C
Sbjct: 318 GMLFSGGFVDATWAKNEPRECRFVFIGKNLDKGALINGFMDC 359
>gi|323452785|gb|EGB08658.1| hypothetical protein AURANDRAFT_12902, partial [Aureococcus
anophagefferens]
Length = 332
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/284 (44%), Positives = 172/284 (60%), Gaps = 20/284 (7%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQ-FDHIVIETTGLAKPAPVIETFCTDELVSQYVKL 62
NGC+CCTVR DL +L +L K + D I+IETTG+A PAPV +TF DE V + +L
Sbjct: 66 NGCICCTVRADLSVVLKKLKGKHDARPLDGIIIETTGMADPAPVAQTFFVDEAVGAFARL 125
Query: 63 DGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVT-ETELGSLTERIK 121
DG++TLVD+KH QHL+E KP NEAVEQVA+ADR++LNK DLV E L + R++
Sbjct: 126 DGIVTLVDAKHVEQHLDEEKPEGAENEAVEQVAFADRLVLNKTDLVPDEAALRRVEGRLR 185
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN AP+ + V D VL +G +DL R + +D + T G HE
Sbjct: 186 AINKFAPIVRCEQSRVAADQVLNIGAFDLTRT---LEMDPAFLDT------DGEHE---- 232
Query: 182 NHMHDSAVSSVTI-VSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
HD +V+S+ SE +DL DWL+ L+ ++G +L+R+KGILSV+ +YV+
Sbjct: 233 ---HDQSVTSLGFDTSEADVDLGLFQDWLQGLLRDEGPNLFRIKGILSVADVPDRYVYHA 289
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
VH DG W P E R++KL FIG++LD AL+ GF CLA
Sbjct: 290 VHMIFDGRFMDPWAPGE-RVSKLTFIGKHLDHGALKAGFLACLA 332
>gi|11139268|gb|AAG31652.1| PRLI-interacting factor L [Arabidopsis thaliana]
Length = 245
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/239 (52%), Positives = 162/239 (67%), Gaps = 15/239 (6%)
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
VKLDGV+TLVD+KHA HL+EVKP VNEAVEQ+AYADRII+NK DLV E EL S+ +R
Sbjct: 6 VKLDGVVTLVDAKHARLHLDEVKPEGYVNEAVEQIAYADRIIVNKTDLVGEPELASVMQR 65
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSH---------------C 164
IK IN+MA +K KYG VD+D+VLG+GG+DLERI+S V+ +
Sbjct: 66 IKTINSMAHMKRTKYGKVDLDYVLGIGGFDLERIESSVNEEEKEDREGHDDHHHGHDCHD 125
Query: 165 ATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMK 224
+ HE H H H H+H HD V SV+IV EG LDL++ + WL L+ ++ ED+YRMK
Sbjct: 126 HHNEHEHEHEHEHHHSHDHTHDPGVGSVSIVCEGDLDLEKANMWLGALLYQRNEDIYRMK 185
Query: 225 GILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
GILSV ++++VFQGVH +G P + W DE R NK+VFIG+NL+ L GF+ CL
Sbjct: 186 GILSVQDMDERFVFQGVHEIFEGSPDRLWRKDETRTNKIVFIGKNLNREELEMGFRACL 244
>gi|428219513|ref|YP_007103978.1| cobalamin synthesis protein P47K [Pseudanabaena sp. PCC 7367]
gi|427991295|gb|AFY71550.1| cobalamin synthesis protein P47K [Pseudanabaena sp. PCC 7367]
Length = 334
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/288 (44%), Positives = 180/288 (62%), Gaps = 26/288 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ + +FDH+VIETTGLA+P PVI+TF DE V+ K
Sbjct: 63 MNNGCICCTVRGDLIRIISNLMRRNK-KFDHLVIETTGLAEPGPVIQTFFVDEDVNSKTK 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + EA EQ+A+AD I+LNK DLV EL L +I+
Sbjct: 122 LDAVVTVVDAKHIAQHWRD-------REAQEQIAFADVILLNKTDLVPPEELKQLEAKIR 174
Query: 122 HINAMAP---VKLAKYGSVD---MDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGH 175
IN +A V+L + +++ + VLGVGG+DL RI
Sbjct: 175 GINTLARIEHVQLKQPEAINEQNIQAVLGVGGFDLGRI------------LEQQPDFLTE 222
Query: 176 HEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQ 235
+ HHH+H HD V S++I G +D ++ +WL L++ KG D+YRMKGI+++ G +
Sbjct: 223 EDDHHHHHHHDEEVFSISISESGAVDPIKLHEWLGVLLQTKGPDIYRMKGIINMIGESNR 282
Query: 236 YVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+VFQGVH D + W DE R N+LVFIGRNLD+ A+R GF+ CL
Sbjct: 283 FVFQGVHMMFDADRDRPWAADESRQNQLVFIGRNLDQEAIRHGFRNCL 330
>gi|258541698|ref|YP_003187131.1| cobalamin synthesis protein CobW [Acetobacter pasteurianus IFO
3283-01]
gi|384041619|ref|YP_005480363.1| cobalamin synthesis protein CobW [Acetobacter pasteurianus IFO
3283-12]
gi|384050134|ref|YP_005477197.1| cobalamin synthesis protein CobW [Acetobacter pasteurianus IFO
3283-03]
gi|384053244|ref|YP_005486338.1| cobalamin synthesis protein CobW [Acetobacter pasteurianus IFO
3283-07]
gi|384056476|ref|YP_005489143.1| cobalamin synthesis protein CobW [Acetobacter pasteurianus IFO
3283-22]
gi|384059117|ref|YP_005498245.1| cobalamin synthesis protein CobW [Acetobacter pasteurianus IFO
3283-26]
gi|384062411|ref|YP_005483053.1| cobalamin synthesis protein CobW [Acetobacter pasteurianus IFO
3283-32]
gi|384118487|ref|YP_005501111.1| cobalamin synthesis protein CobW [Acetobacter pasteurianus IFO
3283-01-42C]
gi|421848332|ref|ZP_16281320.1| cobalamin synthesis protein CobW [Acetobacter pasteurianus NBRC
101655]
gi|256632776|dbj|BAH98751.1| cobalamin synthesis protein CobW [Acetobacter pasteurianus IFO
3283-01]
gi|256635833|dbj|BAI01802.1| cobalamin synthesis protein CobW [Acetobacter pasteurianus IFO
3283-03]
gi|256638888|dbj|BAI04850.1| cobalamin synthesis protein CobW [Acetobacter pasteurianus IFO
3283-07]
gi|256641942|dbj|BAI07897.1| cobalamin synthesis protein CobW [Acetobacter pasteurianus IFO
3283-22]
gi|256644997|dbj|BAI10945.1| cobalamin synthesis protein CobW [Acetobacter pasteurianus IFO
3283-26]
gi|256648052|dbj|BAI13993.1| cobalamin synthesis protein CobW [Acetobacter pasteurianus IFO
3283-32]
gi|256651105|dbj|BAI17039.1| cobalamin synthesis protein CobW [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654096|dbj|BAI20023.1| cobalamin synthesis protein CobW [Acetobacter pasteurianus IFO
3283-12]
gi|371460693|dbj|GAB26523.1| cobalamin synthesis protein CobW [Acetobacter pasteurianus NBRC
101655]
Length = 334
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/283 (43%), Positives = 168/283 (59%), Gaps = 23/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K++ G+FD I++ETTGLA PAPV +TF DE V K
Sbjct: 74 MNNGCICCTVRGDLIRILNGLMKRR-GKFDGIIVETTGLADPAPVAQTFFADEDVRAKTK 132
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+ + + L E EA EQVA+AD IILNK DLV EL ++ + I+
Sbjct: 133 LDAVVTVVDASNFLSTLKESP------EAHEQVAFADVIILNKTDLVDAAELKAVEDAIR 186
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
INA+AP+ AK G+V + V+ GG+DLER+ H HHHE
Sbjct: 187 KINAVAPIYPAKKGNVKLTDVMDRGGFDLERVLENTPDFLEHTPEHHHEGD--------- 237
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
++SV++ + LD W+ L++EKG D+ R KGIL +G ++ FQ V
Sbjct: 238 -------ITSVSLTVKQPLDAGRFQAWIGALLQEKGGDILRTKGILDFAGQPDRFAFQAV 290
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG W DE R ++LVFIGRNL+ LR+G + C+A
Sbjct: 291 HMMADGDNIGPWKKDEPRESRLVFIGRNLNRPQLRRGLESCIA 333
>gi|307103409|gb|EFN51669.1| hypothetical protein CHLNCDRAFT_49195 [Chlorella variabilis]
Length = 369
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/313 (42%), Positives = 190/313 (60%), Gaps = 41/313 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L +L K+K +FDHI+IETTGLA PAPV +TF D+ + ++
Sbjct: 57 MNNGCICCTVRGDLIRILTKLLKRKN-RFDHILIETTGLADPAPVAQTFFVDDDLKHSLR 115
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD+KH + HL+E KP + VA+ADR++LNKIDLVTE E + RIK
Sbjct: 116 LDSILTVVDAKHILLHLDEEKP--------DDVAFADRVLLNKIDLVTEEEKREVVRRIK 167
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI---DSEVHVD------------------ 160
IN V + V++D +LG+ +DLE+I D D
Sbjct: 168 AINRTTKVIECQQARVELDRILGLQSFDLEQILAMDPAFLKDHHHHEHEHEHEHGHGHEH 227
Query: 161 ---NSHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG 217
+ CA H H H+H HDS VSSV I EG LD+ +++WL L++EKG
Sbjct: 228 EHKDDDCA-QCAAGDPDHSHHHGHSHKHDSRVSSVGIECEGALDMQRLNEWLSTLLQEKG 286
Query: 218 EDLYRMKGILSVSGSEQQYVFQGVH------STLDGCPGKAWGPDEKRINKLVFIGRNLD 271
D+YR KGIL+++GS+ +YVF GVH S+ +G GK W P + R N++VFIG++L+
Sbjct: 287 ADIYRSKGILNIAGSDDKYVFHGVHMMLQFGSSAEGL-GKPWQPGQPRFNRVVFIGKDLN 345
Query: 272 ETALRKGFKGCLA 284
L GF+ C+A
Sbjct: 346 RQELNDGFRSCMA 358
>gi|219130655|ref|XP_002185475.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403006|gb|EEC42962.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 394
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/283 (43%), Positives = 171/283 (60%), Gaps = 18/283 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
V NGC+CCTVRGDLV L +L KK + F+ ++IETTGLA PAPV++TF DE + + K
Sbjct: 68 VMNGCICCTVRGDLVVALKKLYKKVE-SFNGVIIETTGLADPAPVVQTFFVDEDLRKMYK 126
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLV-TETELGSLTERI 120
LD VIT+ D+KH L+E KP V NEA+EQVA+AD+IILNK+DL E EL + R+
Sbjct: 127 LDSVITVTDAKHINIRLDEKKPEGVENEALEQVAFADKIILNKVDLAENEAELSATMARL 186
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
K IN A + Y + +LG+ +DL+R+ + D EG
Sbjct: 187 KSINPTAQILSCSYSKISPKELLGINAFDLKRV---LKFDPEFL-----------DEGQE 232
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
H HDS+V S EG + + + W+ERL+ E G +LYR KG+L+V G ++++VFQG
Sbjct: 233 HQ--HDSSVVSTASKIEGEFNHEMLLRWIERLVVEDGANLYRYKGVLAVKGKKEKFVFQG 290
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
V G W +EKR ++ VFIG+NLD+ L+ GF+ CL
Sbjct: 291 VGMMFSGSFEGKWKKNEKRESRFVFIGKNLDKEFLKYGFEACL 333
>gi|404489202|ref|YP_006713308.1| cobalamin synthesis protein [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423682255|ref|ZP_17657094.1| hypothetical protein MUY_02083 [Bacillus licheniformis WX-02]
gi|52348193|gb|AAU40827.1| putative cobalamin synthesis protein [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|383439029|gb|EID46804.1| hypothetical protein MUY_02083 [Bacillus licheniformis WX-02]
Length = 330
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/286 (44%), Positives = 180/286 (62%), Gaps = 25/286 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCTVRGDL+++L L QG+ FD ++IETTGLA PAPV +TF DEL+S+
Sbjct: 66 MNNGCICCTVRGDLIRILRTLVFSMDQGKVAFDRVLIETTGLADPAPVAQTFFMDELLSE 125
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
++D ++T+VDSKH +HL++ +EA EQ+A+AD IILNK DLV+ EL SL +
Sbjct: 126 IFEVDSIVTVVDSKHVTRHLDDQ------DEAQEQIAFADVIILNKTDLVSNNELKSLEQ 179
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ +IN A A+ V++ +LG+ +D+ R ++ +D H
Sbjct: 180 RLVNINPTAKRLYARDCKVNLRDILGINTFDVNR---KIEID-------------PHFLE 223
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HH+H HD VSS+ E LDL +VD W+ L+ EKGEDL R KGIL + G E + VF
Sbjct: 224 DHHHHHHDDKVSSIAFREEKPLDLAKVDHWMSYLVREKGEDLLRYKGILYIKGEEYRIVF 283
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QG+H G P + W +EK+ ++LVFIG++LD+ L + FK C+A
Sbjct: 284 QGLHMLFSGRPDRKWNENEKKQSELVFIGKDLDKEELERQFKNCIA 329
>gi|329115248|ref|ZP_08244003.1| Putative GTP-binding protein YjiA [Acetobacter pomorum DM001]
gi|326695691|gb|EGE47377.1| Putative GTP-binding protein YjiA [Acetobacter pomorum DM001]
Length = 351
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/283 (43%), Positives = 167/283 (59%), Gaps = 23/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K++ G+FD I++ETTGLA PAPV +TF DE V K
Sbjct: 91 MNNGCICCTVRGDLIRILNGLMKRR-GKFDGIIVETTGLADPAPVAQTFFADEDVRAKTK 149
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+ + + L E EA EQVA+AD IILNK DLV EL ++ + I+
Sbjct: 150 LDAVVTVVDASNFLTTLTESP------EAHEQVAFADVIILNKTDLVDAAELKTVEDAIR 203
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
INA AP+ AK G+V + V+ GG+DLERI H HHHE
Sbjct: 204 KINAAAPIYPAKKGNVKLTDVMDRGGFDLERILENAPDFLEHTPEHHHEGD--------- 254
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
++SV++ + LD W+ L++EKG D+ R KGIL +G ++ FQ V
Sbjct: 255 -------ITSVSLTVKQPLDAGRFQAWVSALLQEKGGDILRTKGILDFAGQHDRFAFQAV 307
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG W DE R ++LVFIGRNL+ LR+G + C+A
Sbjct: 308 HMMADGDNIGPWKKDEPRESRLVFIGRNLNRPQLRRGLESCIA 350
>gi|52080316|ref|YP_079107.1| cobalamin synthesis protein/P47K family protein [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|52003527|gb|AAU23469.1| Cobalamin synthesis protein/P47K family protein [Bacillus
licheniformis DSM 13 = ATCC 14580]
Length = 328
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/286 (44%), Positives = 180/286 (62%), Gaps = 25/286 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCTVRGDL+++L L QG+ FD ++IETTGLA PAPV +TF DEL+S+
Sbjct: 64 MNNGCICCTVRGDLIRILRTLVFSMDQGKVAFDRVLIETTGLADPAPVAQTFFMDELLSE 123
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
++D ++T+VDSKH +HL++ +EA EQ+A+AD IILNK DLV+ EL SL +
Sbjct: 124 IFEVDSIVTVVDSKHVTRHLDDQ------DEAQEQIAFADVIILNKTDLVSNNELKSLEQ 177
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ +IN A A+ V++ +LG+ +D+ R ++ +D H
Sbjct: 178 RLVNINPTAKRLYARDCKVNLRDILGINTFDVNR---KIEID-------------PHFLE 221
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HH+H HD VSS+ E LDL +VD W+ L+ EKGEDL R KGIL + G E + VF
Sbjct: 222 DHHHHHHDDKVSSIAFREEKPLDLAKVDHWMSYLVREKGEDLLRYKGILYIKGEEYRIVF 281
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QG+H G P + W +EK+ ++LVFIG++LD+ L + FK C+A
Sbjct: 282 QGLHMLFSGRPDRKWNENEKKQSELVFIGKDLDKEELERQFKNCIA 327
>gi|303274172|ref|XP_003056409.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462493|gb|EEH59785.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 391
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 131/323 (40%), Positives = 185/323 (57%), Gaps = 41/323 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
++NGC+CCTVRGDLV+ LL L K + +FDH++IETTGLA PAPV TF + +++ +
Sbjct: 69 MDNGCVCCTVRGDLVRALLTL-KDRAKKFDHVIIETTGLADPAPVAFTFFINPEIAEAYR 127
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
+D ++ L D+KH HL E KP VNEAV+QVA+ADRI+LNKIDLV + L + + +K
Sbjct: 128 IDSILCLADAKHIGLHLAEEKPDGAVNEAVQQVAFADRILLNKIDLVNDNLLDDVIDTLK 187
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI---------DSEVHV------------- 159
INA+A V VD+D VLGV + +E+ D E H
Sbjct: 188 SINAVAEVIKTTNSVVDLDKVLGVSSFSIEKTLEVDPDFLDDEEGHAKAEAIENAAADGT 247
Query: 160 -DNSHCA-----THHHESAHGHHEGHHHNH---------MHD-SAVSSVTIVSEGTLDLD 203
D S A +H H + + +G N HD + VSSV IV+EG LD
Sbjct: 248 DDASKTAACTDDSHGHSHSQINRQGTTLNEPAKKRPRKKKHDLTGVSSVGIVAEGELDFA 307
Query: 204 EVDDWLERLIEEKGEDLYRMKGILSVSGSEQ-QYVFQGVHSTLDGCPGKA-WGPDEKRIN 261
EV+ ++ ++++E +YR KG++ ++VFQGVH ++ P WG DE R+N
Sbjct: 308 EVNTFMMKVLQENALSIYRSKGVMCFKDQGAVKFVFQGVHEQINFGPSSVMWGQDEPRVN 367
Query: 262 KLVFIGRNLDETALRKGFKGCLA 284
K+VFIGRNL+ L GF+ C+A
Sbjct: 368 KMVFIGRNLNRKELEDGFRACIA 390
>gi|319645904|ref|ZP_08000134.1| cobalamin synthesis protein/P47K family protein [Bacillus sp.
BT1B_CT2]
gi|317391654|gb|EFV72451.1| cobalamin synthesis protein/P47K family protein [Bacillus sp.
BT1B_CT2]
Length = 330
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 126/286 (44%), Positives = 180/286 (62%), Gaps = 25/286 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCTVRGDL+++L L QG+ FD ++IETTGLA PAPV +TF DEL+S+
Sbjct: 66 MNNGCICCTVRGDLIRILRTLVFSMYQGKVAFDRVLIETTGLAHPAPVAQTFFMDELLSE 125
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
++D ++T+VDSKH +HL++ +EA EQ+A+AD IILNK DLV+ EL SL +
Sbjct: 126 IFEVDSIVTVVDSKHVTRHLDDQ------DEAQEQIAFADVIILNKTDLVSNNELKSLEQ 179
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ +IN A A+ V++ +LG+ +D+ R ++ +D H
Sbjct: 180 RLVNINPTAKRLYARDCKVNLRDILGINTFDVNR---KIEID-------------PHFLE 223
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HH+H HD VSS+ E LDL +VD W+ L+ EKGEDL R KGIL + G E + VF
Sbjct: 224 DHHHHHHDDKVSSIAFREEKPLDLAKVDHWMSYLVREKGEDLLRYKGILYIKGEEYRIVF 283
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QG+H G P + W +EK+ ++LVFIG++LD+ L + FK C+A
Sbjct: 284 QGLHMLFSGRPDRKWNENEKKQSELVFIGKDLDKEELERQFKNCIA 329
>gi|221209435|ref|ZP_03582416.1| cobalamin synthesis protein/P47K [Burkholderia multivorans CGD1]
gi|221170123|gb|EEE02589.1| cobalamin synthesis protein/P47K [Burkholderia multivorans CGD1]
Length = 375
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 183/305 (60%), Gaps = 26/305 (8%)
Query: 2 VNNGCLCC--TVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+ NGC+CC VR DLV+++ L + + DHI++ET+GLA P PV +TF D+ +++
Sbjct: 70 MTNGCVCCVGAVREDLVRIVRMLVARPD-RLDHIIVETSGLADPYPVAQTFFLDDPIAKE 128
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
V LD V+T+VD+KH HL+++ N+AV+Q+ ADRI++NK+DLV ++ SL+ R
Sbjct: 129 VALDAVVTMVDAKHIRAHLDDLVLDGRDNQAVDQIVCADRIVINKVDLVDAADVESLSAR 188
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERI---------DSEVHVDNSHCATHHHE 170
++ +NA A + + Y VD+D +LGVG + +I D++ HVDN H H
Sbjct: 189 LRELNATAEIVTSSYAQVDLDRILGVGANEFAQILVESDGLHADTDAHVDN-HTDKHATH 247
Query: 171 SAHGHHEGHHHNHMHDS-----------AVSSVTIVSEGTLDLDEVDDWLERLIEEKGED 219
AHG H+ H H H S +VSSV I + +DLD ++ WL L + +
Sbjct: 248 DAHGGHDTHAHGE-HPSHDGHDDHEHDPSVSSVGIEVDADVDLDALEAWLAELRDADTAN 306
Query: 220 LYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
L+RMKGIL+V G Q+YV QGVH ++ +AWG E R +++VFIGR+LD AL F
Sbjct: 307 LFRMKGILAVHGRAQRYVLQGVHGVIELRAARAWGT-EPRASRIVFIGRDLDRAALTDRF 365
Query: 280 KGCLA 284
CLA
Sbjct: 366 HACLA 370
>gi|359461724|ref|ZP_09250287.1| cobalamin synthesis protein, P47K [Acaryochloris sp. CCMEE 5410]
Length = 337
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 169/282 (59%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L +++ +FDH+VIETTGLA PAPVI+TF DE + +
Sbjct: 80 MNNGCICCTVRGDLIRIIGNLMRRRD-RFDHLVIETTGLADPAPVIQTFFVDEEIQAQLD 138
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD++H H E EQ+A+AD I+LNK DLV +L L ++++
Sbjct: 139 LDAVVTVVDAQHVETHWQS-------EEVQEQIAFADVILLNKTDLVPPEKLTELEQKMR 191
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NAM + + MD +LGV +DL+R + +D HE
Sbjct: 192 AMNAMVKIHRTHQCQIGMDAILGVKAFDLQR---ALEIDPEFLGEDAHE----------- 237
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD +V S +V G ++LD+++ W+ L++ G +++RMKGIL+V ++++VFQGV
Sbjct: 238 ---HDESVYSCALVEPGAVNLDKLNTWMSDLLQTHGPNIFRMKGILNVEDEDRRFVFQGV 294
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H +G P + W E R N++VFIGR+LD L F+ CL
Sbjct: 295 HMIFEGSPDRPWKSSETRQNEIVFIGRDLDAMNLEASFQACL 336
>gi|308805482|ref|XP_003080053.1| PRLI-interacting factor L-like (ISS) [Ostreococcus tauri]
gi|116058512|emb|CAL53701.1| PRLI-interacting factor L-like (ISS) [Ostreococcus tauri]
Length = 376
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 121/285 (42%), Positives = 177/285 (62%), Gaps = 18/285 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
++NGC+CCTVRGDLV+ LL L + + +FD ++IETTGLA PAPV TF + +++ +
Sbjct: 106 MDNGCVCCTVRGDLVRALLTL-RDRGKKFDAVIIETTGLADPAPVAFTFFINPEIAENYR 164
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
+D ++ L D+KH H+ E KP VNEAV+QVA+ADRI+LNKIDLV+E EL +L + ++
Sbjct: 165 IDSILCLADAKHVALHMEEEKPDGAVNEAVQQVAFADRILLNKIDLVSEEELETLEKTLR 224
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA A V + VD++ VLGV + LE+ E+ + +
Sbjct: 225 SVNASAEVLRTQNSVVDLNVVLGVNSFSLEKT---------------LETDPSFMDENKE 269
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGS-EQQYVFQG 240
N + VSSV I EG LD V++++ L++E ++YR KG+L G + ++VFQG
Sbjct: 270 NKHDLTGVSSVGIAVEGELDFQAVNEFMMNLLQENALNMYRSKGVLCFEGQGDAKFVFQG 329
Query: 241 VHSTLDGCPGKA-WGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
VH ++ P + W +E RIN++VFIGRNLD AL GF+ CLA
Sbjct: 330 VHEQINFGPAASTWAENEPRINRMVFIGRNLDRPALEAGFRACLA 374
>gi|421852314|ref|ZP_16285003.1| cobalamin synthesis protein CobW [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|371479394|dbj|GAB30206.1| cobalamin synthesis protein CobW [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 313
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 121/283 (42%), Positives = 168/283 (59%), Gaps = 23/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K++ G+FD I++ETTGLA PAPV +TF DE V K
Sbjct: 53 MNNGCICCTVRGDLIRILNGLMKRR-GKFDGIIVETTGLADPAPVAQTFFADEDVRAKTK 111
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+ + + L + EA EQVA+AD IILNK DLV EL ++ + I+
Sbjct: 112 LDAVVTVVDASNFLTTLKDSP------EAHEQVAFADVIILNKTDLVDAAELKAVEDAIR 165
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
INA+AP+ AK G+V + V+ GG+DLER+ H HHHE
Sbjct: 166 KINAVAPIYPAKKGNVKLTDVMDRGGFDLERVLENTPDFLEHTPEHHHEGD--------- 216
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
++SV++ + LD W+ L++EKG D+ R KGIL +G ++ FQ V
Sbjct: 217 -------ITSVSLTVKQPLDAGRFQAWIGALLQEKGGDILRTKGILDFAGQPDRFAFQAV 269
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG W DE R ++LVFIGRNL+ LR+G + C+A
Sbjct: 270 HMMADGDNIGPWKKDEPRESRLVFIGRNLNRPQLRRGLESCIA 312
>gi|255074499|ref|XP_002500924.1| predicted protein [Micromonas sp. RCC299]
gi|226516187|gb|ACO62182.1| predicted protein [Micromonas sp. RCC299]
Length = 390
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 126/324 (38%), Positives = 185/324 (57%), Gaps = 47/324 (14%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
++NGC+CCTVRGDLV+ LL L K K +FDH++IETTGLA PAPV TF + ++ + +
Sbjct: 69 MDNGCVCCTVRGDLVRALLTL-KDKTKKFDHVIIETTGLADPAPVAFTFFINPEIADHYR 127
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
+D ++ L D+KH HL E KP VNEAV+QVA+ADRI+LNKIDLV++TEL ++ E+++
Sbjct: 128 IDSILCLADAKHIGLHLEEEKPDGAVNEAVQQVAFADRILLNKIDLVSDTELAAVMEQVR 187
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI---------------------------- 153
IN +A V VD+D VLGV + +E+
Sbjct: 188 SINGVAEVIKTTNSVVDLDKVLGVSSFSIEKTLEVDPDFLEDEEGHAAATAAHDGAAADG 247
Query: 154 ------------DSEVHVDNSHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLD 201
+E H D+ H H +A + H + VSSV I++EG LD
Sbjct: 248 GDHGHGHSHDGGKTECHEDHGHGHGHGEPAAKKPRKKRHDL----TGVSSVGILAEGELD 303
Query: 202 LDEVDDWLERLIEEKGEDLYRMKGILSVSGS-EQQYVFQGVHSTLDGCPGKA-WGPDEKR 259
++V+ ++ +++E + +YR KG+L ++VFQGVH ++ P WG DE R
Sbjct: 304 FNQVNTFMMTVLQENAKSIYRSKGVLCFKDQGNTKFVFQGVHEHINFGPSSVEWGADEPR 363
Query: 260 INKLVFIGRNLDETALRKGFKGCL 283
+N++VFIGRNL+ L +GF+ CL
Sbjct: 364 VNRMVFIGRNLNRKELEEGFRACL 387
>gi|349687622|ref|ZP_08898764.1| cobalamin biosynthesis protein [Gluconacetobacter oboediens 174Bp2]
Length = 333
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 171/283 (60%), Gaps = 24/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K++ +FD I++ETTGLA PAPV +TF DE V +
Sbjct: 74 MNNGCICCTVRGDLIRILGNLMKRR-AKFDGIIVETTGLADPAPVAQTFFVDEDVRGKTR 132
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+ + +Q L+E EAV Q+A+AD IILNK DLV E L ++ RI+
Sbjct: 133 LDAVVTVVDAYNVIQTLDESP------EAVNQIAFADVIILNKTDLVDEVALATIESRIR 186
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
INA+A + A+ G V + VL GG+DL+R H H
Sbjct: 187 SINAVARIHRAQRGDVPLSDVLDQGGFDLQR-----------------ALEHAPHFLEDT 229
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+H H++ V+S++ E LD + W+ +++E+G D+ R KGIL+ +G +Q++ FQ V
Sbjct: 230 SHSHEADVTSLSYEVEEPLDAAKFQAWIGAVLQEQGADILRAKGILNYAGEDQRFAFQAV 289
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG W E R+++LVFIGRNL+ LR+GF+ C A
Sbjct: 290 HMMADGGFIGPWKEGEPRVSRLVFIGRNLNRPQLRRGFESCRA 332
>gi|403381377|ref|ZP_10923434.1| hypothetical protein PJC66_16286 [Paenibacillus sp. JC66]
Length = 307
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 174/290 (60%), Gaps = 28/290 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG-------QFDHIVIETTGLAKPAPVIETFCTDE 54
+NNGC+CCTVRGDL+++L QL + K G FD ++IETTGLA PAPV +TF D
Sbjct: 38 MNNGCICCTVRGDLIRILGQLMEAKLGTGGGRKADFDRVLIETTGLADPAPVAQTFFVDP 97
Query: 55 LVSQYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELG 114
+SQ+ KLD ++T+VD+KH QHL+E +EA EQVA+AD ++LNK DLV+E EL
Sbjct: 98 EISQFFKLDAIVTVVDAKHVGQHLDEG------HEAQEQVAFADVLLLNKTDLVSEEELQ 151
Query: 115 SLTERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHG 174
L +R+ +N+ A + + +D+ +LG+G +DLE+ E G
Sbjct: 152 KLEQRLHTMNSAAKLYRTQQAQIDIKQILGIGAFDLEK---------------KLEIEPG 196
Query: 175 HHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQ 234
E H+H HD V+S+ LDLD+V+ +++ + + G D +R KG+L++ G ++
Sbjct: 197 FLEEEAHDHDHDDEVTSLFFRETRPLDLDKVERFIKEWLVDHGVDTFRYKGVLNIKGVKK 256
Query: 235 QYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+ VFQG+H P + W +E I++ V IGRNLDE RK F C+A
Sbjct: 257 RVVFQGIHMLFGSYPDRDWRQNEVPISEFVIIGRNLDEEWFRKQFADCVA 306
>gi|392379083|ref|YP_004986242.1| putative cobalamin synthesis protein/P47K family protein
[Azospirillum brasilense Sp245]
gi|356881450|emb|CCD02437.1| putative cobalamin synthesis protein/P47K family protein
[Azospirillum brasilense Sp245]
Length = 324
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 170/281 (60%), Gaps = 25/281 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CC VRGDL++ L++LA+ ++G FD +VIET+GLA PAPVI++F DE +
Sbjct: 60 LNNGCVCCIVRGDLIEALVRLAEGERG-FDRVVIETSGLADPAPVIQSFVLDEGLRGRFA 118
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD +IT+ D++H L +EA EQVA+AD I+LNKIDL L ++ I+
Sbjct: 119 LDAIITVADARHLPLQLGH-------DEAREQVAFADVILLNKIDLEPAAALDAVEREIR 171
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+N +A + + ++ + +LG+G +DL+ I + +D H HE
Sbjct: 172 RLNPLARIHRTEECALPLSEILGIGAFDLQNI---LRLDPDILDEHEHE----------- 217
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD+ + V G LD VD WL +L+++KG DL R KG+L + G +++VF GV
Sbjct: 218 ---HDAGIGCVAFREPGRLDPAAVDRWLNQLVQDKGRDLLRAKGVLDLDGQGRRFVFHGV 274
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
H TLDG G+ W P E+R+N+LVFIGRNLD L +G +GC
Sbjct: 275 HMTLDGRLGRPWRPGEERLNQLVFIGRNLDAERLLEGLRGC 315
>gi|126666479|ref|ZP_01737458.1| hypothetical protein MELB17_12861 [Marinobacter sp. ELB17]
gi|126629280|gb|EAZ99898.1| hypothetical protein MELB17_12861 [Marinobacter sp. ELB17]
Length = 324
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 170/283 (60%), Gaps = 23/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K+ +G FD I++ETTG+A PAPV +TF D+ V
Sbjct: 60 MNNGCICCTVRGDLIRIISGLMKRLKG-FDAIILETTGIADPAPVAQTFFVDDEVRAKTS 118
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+K+ L + +EA EQ+A+AD I+LNK+DLV+E E +L RI
Sbjct: 119 LDAVVTVVDAKNLPARLADS------SEAAEQIAFADVILLNKVDLVSEEERKALESRIL 172
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+N A + + Y V +D +L +G +DLERI V ++ H
Sbjct: 173 GMNPYARIIPSNYCDVPLDQILNLGSFDLERI---VALEPGFLT-------------EDH 216
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+H HD + S+++ S LD D + W+ ++ +G D+ R KGIL + G +Q+YVFQ V
Sbjct: 217 DHEHDDTIKSISLTSNVPLDSDRFESWIMEVLRTQGVDILRCKGILDLVGMDQRYVFQSV 276
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H D + W DEKR ++LVFIGR+LDETAL GF C A
Sbjct: 277 HMLADSTATQPWRADEKRESRLVFIGRDLDETALTAGFSACKA 319
>gi|301101608|ref|XP_002899892.1| cobalamin synthesis protein, putative [Phytophthora infestans
T30-4]
gi|262102467|gb|EEY60519.1| cobalamin synthesis protein, putative [Phytophthora infestans
T30-4]
Length = 456
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/297 (40%), Positives = 182/297 (61%), Gaps = 17/297 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKK--QGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+NNGC+CC+VRGDLV+++ Q+ K+ + Q D I+IETTG+A P PV++TF + LV+
Sbjct: 85 MNNGCICCSVRGDLVRLIAQILKRNGDRSQLDGIIIETTGMADPGPVVQTFFAEPLVAAT 144
Query: 60 VKLDGVITLVDSKHAMQHLNEVKP-RFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+LDG+IT+VD+KH +QHL +P V E EQ+A+ADR++LNK DLV+ TEL +
Sbjct: 145 CELDGIITVVDAKHILQHL---RPGNGVEYECEEQIAFADRVLLNKTDLVSSTELKEVHY 201
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEV-------HVDNSHCATHHHES 171
RI+ IN+ V ++ VD +L V +DL+ I ++H HE
Sbjct: 202 RIRDINSAVSVIKCQHCRVDPALLLNVKTFDLDSILKRQPDFLKVKETTHAHGDDTDHEH 261
Query: 172 AHGHHEG----HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGIL 227
HGH + H N S V+SV + + + ++DW++ +++ +G+DL R KG++
Sbjct: 262 KHGHEQNVELHHSGNKRKHSLVTSVGLSLPDPILVALLEDWIDDILDTEGDDLLRYKGVV 321
Query: 228 SVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+V+G +++YVFQGVH+ +G W P EKR + VFIG+NLD AL +GF C A
Sbjct: 322 NVAGIDKKYVFQGVHTLFNGRFADNWAPGEKRETRFVFIGKNLDRQALTEGFLACRA 378
>gi|384252271|gb|EIE25747.1| cobW-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 326
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/288 (44%), Positives = 177/288 (61%), Gaps = 35/288 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV++L L K+K +FD I+IETTGLA PAPV +TF D+ ++ +
Sbjct: 67 MNNGCICCTVRGDLVRILNTLLKRKD-RFDAILIETTGLADPAPVAQTFFVDDSLAGRLA 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD +IT+VD+KH QHL+E KP QVA+AD I+LNK DLV+E + +T RIK
Sbjct: 126 LDAIITVVDAKHIEQHLDEEKPE-------GQVAFADVILLNKADLVSEDDQKRITARIK 178
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
INA A V +VD+D ++ + G+ LE++ + +D +
Sbjct: 179 AINASAEVINTVKCNVDLDKIINIKGFQLEKV---LEMDPNFL----------------- 218
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+H HD V+SV EG + ++ WL RL+ E+G DL+R KGI++V S +++ FQGV
Sbjct: 219 DHKHDDRVTSVGFEVEGECEGHRLNAWLSRLMMEQGVDLFRSKGIIAVHKSPERHFFQGV 278
Query: 242 H------STLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H S+ +G G+ W P EKR NKLVFIGRNLD LR F+ C+
Sbjct: 279 HMLLTFGSSAEGL-GQPWQPGEKRTNKLVFIGRNLDREQLRADFQACI 325
>gi|323451260|gb|EGB07138.1| hypothetical protein AURANDRAFT_69850 [Aureococcus anophagefferens]
Length = 350
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 172/285 (60%), Gaps = 16/285 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
++NGC CC++RGDLV+ L L +K+ QFD +++ETTGLA PAP+I T +++ +
Sbjct: 73 MDNGCACCSIRGDLVRTLGGLVEKRT-QFDAVMLETTGLADPAPIIATLKSNQWIDDNFV 131
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
+D V+ L +KH HL+EVKP VNEAV+Q+A+ D+++LNK+DLV + EL ++T R+K
Sbjct: 132 IDSVLCLASAKHVQSHLDEVKPEGAVNEAVQQIAFCDKVLLNKVDLVNDEELAAITARVK 191
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + + VD+ ++GV +D+ER T G
Sbjct: 192 TINHFAEIITCERSIVDLSKIVGVSSFDVER------------CTELDPVLFGVEGAEGQ 239
Query: 182 NHMHD-SAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGS-EQQYVFQ 239
+HD S VSS I EG LD+ + + ++ L++ + DLYR KG+LS +G Q++VFQ
Sbjct: 240 KKVHDLSMVSSCGIAVEGFLDVPKFNMFMAELLQARAADLYRTKGVLSFAGQGAQKFVFQ 299
Query: 240 GVHSTLDGCPGKA-WGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
GVH +D P K W DE R +K+VFIGRNLD L++ + CL
Sbjct: 300 GVHEQIDFGPAKTEWQKDEPRWSKIVFIGRNLDRKYLQEKVESCL 344
>gi|428181248|gb|EKX50112.1| hypothetical protein GUITHDRAFT_157306 [Guillardia theta CCMP2712]
Length = 389
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/283 (40%), Positives = 175/283 (61%), Gaps = 17/283 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
V NGC+CCTVRGDLV+ L +L K+ + QF+ I+IETTGLA PAPV++TF DE + + +
Sbjct: 63 VMNGCICCTVRGDLVEALKKLYKRVE-QFNGIIIETTGLADPAPVVQTFFIDEDIQKKYR 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VIT+VD+KH + L E KP V NE+VEQV +AD+I+LNK+DLV L + ++
Sbjct: 122 LDSVITVVDAKHILSRLKEKKPEGVENESVEQVVFADKILLNKVDLVDGNTLKKIETELR 181
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+N AP+ + V++ VL V +DL+R+ E G +G
Sbjct: 182 ALNPTAPILQTQQSQVNVKEVLNVNAFDLKRV---------------LEFDPGFLDGDQE 226
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
H HD +++SV + + ++++ + W++RLI ++G +LYR KG+++V G E+++VFQGV
Sbjct: 227 -HQHDLSIASVGVKTCDEVNMELLQRWIQRLITDEGANLYRYKGVIAVKGIEEKFVFQGV 285
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
G W E R ++ +FIGRNLD+ +L GF+ C A
Sbjct: 286 GMLFSGGFHGRWRAREVRESRFIFIGRNLDKQSLIAGFEACAA 328
>gi|409401328|ref|ZP_11251140.1| putative cobalamin synthesis protein [Acidocella sp. MX-AZ02]
gi|409129886|gb|EKM99701.1| putative cobalamin synthesis protein [Acidocella sp. MX-AZ02]
Length = 319
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/283 (40%), Positives = 177/283 (62%), Gaps = 24/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K+ Q +FD I++ETTGLA PAPV +TF DE V +
Sbjct: 61 MNNGCICCTVRGDLIRIVSGLMKRSQ-KFDGIIVETTGLANPAPVAQTFFVDEDVKAKTR 119
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD+KH + L E P EA +QVA+AD I+LNK+DLV EL ++ +IK
Sbjct: 120 LDAIVTVVDAKHFLTRL-EDSP-----EAADQVAFADVIVLNKLDLVNAEELAAVEAKIK 173
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A +K G V D +LG+G +DL+R+ + V E +H H+E
Sbjct: 174 SINPYAVIKKTTKGDVPADELLGLGAFDLKRVLANV-------PDFLEEDSHTHNE---- 222
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
H+ +S+++ ++ L + + W+ +++ +G+++ R KGIL+ G E+++ FQ V
Sbjct: 223 -HL-----TSISLSTDKPLSAQKFNTWIGHILQSQGQNILRTKGILNYEGEERRFAFQAV 276
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG W DEKR++++VFIGR+L+ ALR+GF+ C A
Sbjct: 277 HMIADGDFLAPWKADEKRVSRIVFIGRDLNRPALRRGFESCAA 319
>gi|428180196|gb|EKX49064.1| hypothetical protein GUITHDRAFT_85866 [Guillardia theta CCMP2712]
Length = 475
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/282 (41%), Positives = 173/282 (61%), Gaps = 19/282 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
++NGC+CCTVRGDLVK LA++ + ++D ++IETTG+A PAPV TF T V +
Sbjct: 210 MDNGCVCCTVRGDLVKAFKSLAERNE-KYDAVIIETTGMADPAPVAFTFNTQREVGAKFR 268
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
+D ++ LVD+KH QHL++V+ V+NEAV Q+A+AD+I+LNKIDLV++ E ++ IK
Sbjct: 269 IDAILCLVDAKHIQQHLDDVREAGVINEAVNQIAFADKILLNKIDLVSQEEKSTVRRSIK 328
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
INA A + + ++D +LG+G + LE +H H+ G
Sbjct: 329 SINATAQIIETERSRANLDLLLGIGSFSLE--------------SHDHD---GPTPKKPK 371
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
H S VSSV + +G LD + + ++ +L++EK DLYR KG+L GS+ ++VF GV
Sbjct: 372 RSAHLSGVSSVGVEIDGELDEQKFNIFMTKLLQEKARDLYRSKGVLKFHGSDDKFVFHGV 431
Query: 242 HSTLDGCPGK-AWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
H + P + W EK+ K+VFIGRNLD+ AL KG + C
Sbjct: 432 HEQIAFGPVEDGWNEGEKKKVKVVFIGRNLDKEALHKGLEAC 473
>gi|75675110|ref|YP_317531.1| cobalamin synthesis protein CobW [Nitrobacter winogradskyi Nb-255]
gi|74419980|gb|ABA04179.1| Cobalamin synthesis protein, CobW [Nitrobacter winogradskyi Nb-255]
Length = 350
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 178/290 (61%), Gaps = 15/290 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV++L L K+K G+FD I++ETTGLA PAPV +TF DE V +
Sbjct: 68 MNNGCVCCTVRGDLVRILEGLMKRK-GKFDAIIVETTGLADPAPVAQTFFVDEDVQNNAR 126
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K + L + EA Q+A+AD I+LNK DLV++ EL + RI+
Sbjct: 127 LDAVVTVADAKWLSERLKDAP------EAKNQIAFADVIVLNKTDLVSQPELAEVEARIR 180
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVD-------NSHCATHHHESAHG 174
IN A + + V + VL G +DL+RI E+ D + HH H
Sbjct: 181 GINPYAKLHRTERCQVALSDVLERGAFDLDRI-LEIEPDFLENDGHDHDHHDHHGHDHHD 239
Query: 175 HHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQ 234
H GH H HD + S+++ S+ LD ++ WL+ L+ +G+ + R KG+++ SG +
Sbjct: 240 HDHGHGPKHYHDEEMQSLSLRSDKPLDQEKFMPWLQELLAAEGQKILRSKGLMAFSGDDD 299
Query: 235 QYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+YVFQGVH L+G +AW PDEKR ++LVFIGR L E +R+GF+ C+A
Sbjct: 300 RYVFQGVHMMLEGSRQRAWKPDEKRESRLVFIGRELPEALIREGFQNCIA 349
>gi|161520156|ref|YP_001583583.1| cobalamin synthesis protein P47K [Burkholderia multivorans ATCC
17616]
gi|189353665|ref|YP_001949292.1| cobalamin biosynthesis protein [Burkholderia multivorans ATCC
17616]
gi|421474554|ref|ZP_15922581.1| CobW/P47K family protein [Burkholderia multivorans CF2]
gi|160344206|gb|ABX17291.1| cobalamin synthesis protein P47K [Burkholderia multivorans ATCC
17616]
gi|189337687|dbj|BAG46756.1| cobalamin biosynthesis protein [Burkholderia multivorans ATCC
17616]
gi|400231881|gb|EJO61540.1| CobW/P47K family protein [Burkholderia multivorans CF2]
Length = 375
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 125/304 (41%), Positives = 186/304 (61%), Gaps = 24/304 (7%)
Query: 2 VNNGCLCC--TVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+ NGC+CC VR DLV+++ L + + DHI++ET+GLA P PV +TF D+ +++
Sbjct: 70 MTNGCVCCVGAVREDLVRIVRMLVARPD-RLDHIIVETSGLADPYPVAQTFFLDDPIAKE 128
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
V LD V+T+VD+KH HL+++ N+AV+Q+ ADRI++NK+DLV ++ SL+ R
Sbjct: 129 VALDAVVTMVDAKHIRAHLDDLVLDGRDNQAVDQIVCADRIVINKVDLVDAADVESLSAR 188
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERI---------DSEVHVDNSHCATHHHE 170
++ +NA A + + Y VD+D +LGVG + +I D++ HVDN H H
Sbjct: 189 LRELNATAEIVTSSYAQVDLDRILGVGANEFAQILVESDGLHADTDAHVDN-HADEHATH 247
Query: 171 SAHGHHEGH----------HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDL 220
AHG H+ H H +H HD++VSSV I + +DLD ++ WL L + +L
Sbjct: 248 DAHGGHDTHAHGDHPSHDDHDDHEHDASVSSVGIEVDADVDLDALEAWLAELRDADTANL 307
Query: 221 YRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
+RMKGIL+V G Q+YV QGVH ++ +AWG E R +++VFIGR+LD AL F
Sbjct: 308 FRMKGILAVHGRAQRYVLQGVHGVIELRAAQAWGT-EPRASRIVFIGRDLDRAALTDRFH 366
Query: 281 GCLA 284
CLA
Sbjct: 367 ACLA 370
>gi|383641388|ref|ZP_09953794.1| cobalamin synthesis protein P47K [Sphingomonas elodea ATCC 31461]
Length = 324
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 170/283 (60%), Gaps = 24/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ G FD IVIETTGLA PAPV +TF D+ V
Sbjct: 63 MNNGCICCTVRGDLIRIIEGLMKRR-GTFDAIVIETTGLADPAPVAQTFFVDDDVRARAS 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD++H + L + +EA EQ+A+AD I+LNK DLV +L + RI+
Sbjct: 122 LDAIVTVVDARHILLRLEDS------HEAEEQIAFADVILLNKTDLVDAGDLAQVRHRIR 175
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + + V ++ VL G +DL+RI + ++ + HE
Sbjct: 176 SINGQATLHETQNCVVPLEAVLERGAFDLDRI---LDIEPDFLSEDDHE----------- 221
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD A++SV++ SE + + WL L +G+D+ R+KG+L+ G EQ+YV QGV
Sbjct: 222 ---HDDAITSVSLRSEAPIRPELFMPWLRTLTAAQGQDILRLKGVLAFPGEEQRYVVQGV 278
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H LDG + W P+E R ++LVFIGRNLD AL+ GF C A
Sbjct: 279 HMLLDGNYQREWKPEEPRTSRLVFIGRNLDPAALQAGFDDCAA 321
>gi|412990334|emb|CCO19652.1| predicted protein [Bathycoccus prasinos]
Length = 366
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 118/285 (41%), Positives = 173/285 (60%), Gaps = 19/285 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
++NGC+CCTVRGDLV+ L+QL +K FD ++IETTGLA PAPV TF + ++ Y +
Sbjct: 97 MDNGCVCCTVRGDLVRALMQLKDRKDKTFDAVIIETTGLADPAPVAFTFFLNPEIADYYE 156
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++ LVD+KH HL E K VNEAV QVA+ADRI+LNKIDLV++ L + +K
Sbjct: 157 LDSILCLVDAKHVHLHLEEEKKEGAVNEAVSQVAFADRILLNKIDLVSKERLEETKKVLK 216
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN+ A V + VD+ VLGV + +E+ T H+ + +
Sbjct: 217 AINSSAEVIETQNSQVDLKKVLGVSSFSVEK-------------TLEHDPSFLD---ENK 260
Query: 182 NHMHD-SAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGS-EQQYVFQ 239
+ +HD + V SV I EG LD + V++++ L++E ++YR KG+ G + ++VFQ
Sbjct: 261 SKIHDLTGVGSVGIECEGELDFNRVNEFMMNLLQENSANMYRSKGVFCFQGQGDAKFVFQ 320
Query: 240 GVHSTLDGCP-GKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
GVH ++ P G W EK++N++VFIGR+L+ L GF+ CL
Sbjct: 321 GVHEQINFGPSGNEWRKGEKKLNRMVFIGRDLNREQLESGFRKCL 365
>gi|429768096|ref|ZP_19300267.1| CobW/P47K family protein [Brevundimonas diminuta 470-4]
gi|429189497|gb|EKY30329.1| CobW/P47K family protein [Brevundimonas diminuta 470-4]
Length = 365
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 120/314 (38%), Positives = 177/314 (56%), Gaps = 40/314 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCTVRGDL++++ L K+++ FD I++ETTGLA P PV +TF D+ V
Sbjct: 61 MNNGCVCCTVRGDLIRVVNGLMKRQRPGKPAFDAIIVETTGLADPGPVAQTFFVDDEVKA 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+LD V LVD+KH M L++ K EA EQVA+ADRIILNKIDLV E L +
Sbjct: 121 KTQLDSVTALVDAKHVMARLDDSK------EAREQVAFADRIILNKIDLVDEAALAEVEA 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ +N +AP+ A+ +V +D VLG+ +DL+RI + V H H H E
Sbjct: 175 RLRALNPLAPIVRAERSNVPLDQVLGLHAFDLDRI---LEVKPDFVNPPHGAEGHVHDEH 231
Query: 179 HH----------------------------HNHMHDSAVSSVTIVSEGTLDLDEVDDWLE 210
H H+ + V++ + L+ + WL+
Sbjct: 232 CGHGHDHDHVHDEHCGHDHHDHDHGHDHGPRGHAHNDDIKGVSLTLDRPLNGQKFTAWLD 291
Query: 211 RLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNL 270
+L+ E+G+++ R KGI+ V G +++ VFQ VH L+G + WG E+R ++ VFIGR+L
Sbjct: 292 KLLGEQGQNILRAKGIIDVQGEDRRLVFQAVHMILEGDLQQPWGEKERRWSRAVFIGRDL 351
Query: 271 DETALRKGFKGCLA 284
DE AL+ GF+ C A
Sbjct: 352 DEAALKAGFEACAA 365
>gi|347761629|ref|YP_004869190.1| cobalamin biosynthesis protein [Gluconacetobacter xylinus NBRC
3288]
gi|347580599|dbj|BAK84820.1| cobalamin biosynthesis protein [Gluconacetobacter xylinus NBRC
3288]
Length = 333
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 171/283 (60%), Gaps = 24/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K++ +FD I++ETTGLA PAPV +TF DE V +
Sbjct: 74 MNNGCICCTVRGDLIRILGNLMKRR-AKFDGIIVETTGLADPAPVAQTFFVDEDVRGKTR 132
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+ + +Q L+E EAV Q+A+AD IILNK DLV E L ++ +RI+
Sbjct: 133 LDAVVTVVDAYNVIQTLDESP------EAVNQIAFADVIILNKTDLVDEAGLEAIEKRIR 186
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
INA+ + A+ G V + VL GG+DL+R H H
Sbjct: 187 SINAVGRIHRAQRGDVPLSDVLDQGGFDLQR-----------------ALEHAPHFLEDT 229
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+H H++ V+S++ E LD + W+ +++E+G D+ R KGIL+ +G +Q++ FQ V
Sbjct: 230 SHKHEADVTSLSYEVEEPLDAAKFQAWIGAVLQEQGADILRAKGILNYAGEDQRFAFQAV 289
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG W E R+++LVFIGRNL+ LR+GF+ C A
Sbjct: 290 HMMADGGFIGPWKEGEPRVSRLVFIGRNLNRPQLRRGFESCRA 332
>gi|145342101|ref|XP_001416132.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576356|gb|ABO94424.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 339
Score = 219 bits (558), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 120/285 (42%), Positives = 177/285 (62%), Gaps = 18/285 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
++NGC+CCTVRGDLV+ LL L K ++ +FD ++IETTGLA PAPV TF + ++++ +
Sbjct: 69 MDNGCVCCTVRGDLVRALLTL-KDREKKFDAVIIETTGLADPAPVAFTFFINPEIAEHYR 127
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
+D ++ L D+KH H+ E KP VNEAV+QVA+ADRI+LNKIDLV E E+ +L + I+
Sbjct: 128 IDSILCLADAKHVAMHMEEEKPDGAVNEAVQQVAFADRILLNKIDLVNEEEIATLEKTIR 187
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA A V + VD+ VLGV + LE+ E+ + +
Sbjct: 188 SVNASADVIKTQNSVVDLGVVLGVNSFSLEKT---------------LETDPSFLDENKE 232
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGS-EQQYVFQG 240
N + + VSSV I EG LD +++++ L++ ++YR KG+L G + ++VFQG
Sbjct: 233 NKHNLTGVSSVGIAVEGELDFAAMNEFMMNLLQANATNMYRSKGVLCFEGQGDAKFVFQG 292
Query: 241 VHSTLDGCPGKA-WGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
VH ++ P + W E R+N++VFIGRNLD AL GF+GCLA
Sbjct: 293 VHEQINFGPSASTWAEGEPRVNRMVFIGRNLDRKALEAGFRGCLA 337
>gi|330993154|ref|ZP_08317092.1| COBW domain-containing protein 1 [Gluconacetobacter sp. SXCC-1]
gi|329759924|gb|EGG76430.1| COBW domain-containing protein 1 [Gluconacetobacter sp. SXCC-1]
Length = 333
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 170/283 (60%), Gaps = 24/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K++ +FD I++ETTGLA PAPV +TF DE V +
Sbjct: 74 MNNGCICCTVRGDLIRILGNLMKRR-AKFDGIIVETTGLADPAPVAQTFFVDEDVRGRTR 132
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+ + +Q L E EAV Q+A+AD IILNK DLV E L ++ +RI+
Sbjct: 133 LDAVVTVVDAYNVIQTLEESP------EAVNQIAFADVIILNKTDLVDEAGLEAIEKRIR 186
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
INA+A + A+ G V + VL GG+DL+R H H
Sbjct: 187 SINAVARLHRARRGDVKLSDVLDQGGFDLQR-----------------ALEHAPHFLEDT 229
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+H H++ V+S++ E LD + W+ +++E+G D+ R KGIL+ +G +Q++ FQ V
Sbjct: 230 SHSHEADVTSLSYEVEEPLDAAKFQAWIGAVLQEQGADILRAKGILNYAGEDQRFAFQAV 289
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG W E R ++LVFIGRNL+ LR+GF+ C A
Sbjct: 290 HMMADGGFIGPWKEGEPRASRLVFIGRNLNRPQLRRGFESCRA 332
>gi|349699656|ref|ZP_08901285.1| cobalamin biosynthesis protein [Gluconacetobacter europaeus LMG
18494]
Length = 333
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/283 (40%), Positives = 169/283 (59%), Gaps = 24/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K++ +FD I++ETTGLA PAPV +TF DE V +
Sbjct: 74 MNNGCICCTVRGDLIRILGNLMKRR-AKFDGIIVETTGLADPAPVAQTFFVDEDVRGKTR 132
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+ + +Q L+E EAV Q+A+AD IILNK DLV E L ++ RI+
Sbjct: 133 LDAVVTVVDAYNVIQTLDESP------EAVNQIAFADVIILNKTDLVDEVALATIESRIR 186
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
INA+ + A+ G V + VL GG+DL+R H
Sbjct: 187 SINAVGRIHRAQRGDVPLSDVLDQGGFDLQR-----------------ALEHAPRFLEDT 229
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+H H++ V+S++ E LD + W+ +++E+G D+ R KGIL+ +G +Q++ FQ V
Sbjct: 230 SHSHEADVTSLSYEVEEPLDAAKFQAWIGAVLQEQGADILRAKGILNYAGEDQRFAFQAV 289
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG W E R+++LVFIGRNL+ LR+GF+ C A
Sbjct: 290 HMMADGGFIGPWKEGEPRVSRLVFIGRNLNRPQLRRGFESCRA 332
>gi|221200401|ref|ZP_03573443.1| cobalamin synthesis protein/P47K [Burkholderia multivorans CGD2M]
gi|221206081|ref|ZP_03579095.1| cobalamin synthesis protein/P47K [Burkholderia multivorans CGD2]
gi|221174093|gb|EEE06526.1| cobalamin synthesis protein/P47K [Burkholderia multivorans CGD2]
gi|221179742|gb|EEE12147.1| cobalamin synthesis protein/P47K [Burkholderia multivorans CGD2M]
Length = 378
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/307 (39%), Positives = 179/307 (58%), Gaps = 27/307 (8%)
Query: 2 VNNGCLCC--TVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+ NGC+CC VR DLV+++ L + + DHI++ET+GLA P PV +TF D+ +++
Sbjct: 70 MTNGCVCCVGAVREDLVRIVRMLVARPD-RLDHIIVETSGLADPYPVAQTFFLDDPIAKE 128
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
V LD V+T+VD+KH HL+++ N+AV+Q+ ADRI++NK+DLV ++ SL+ R
Sbjct: 129 VALDAVVTMVDAKHIRAHLDDLVLDGRDNQAVDQIVCADRIVINKVDLVDAADVESLSAR 188
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERI---------DSEVHVDNSHCATHHHE 170
++ +NA A + + Y VD+D +LGVG + +I D++ H D H H
Sbjct: 189 LRELNATAEIVTSSYAQVDLDRILGVGANEFAQILVESDGLHADTDAHADG-HAEEHAAH 247
Query: 171 SAHGHHEGHHHNHMHD-------------SAVSSVTIVSEGTLDLDEVDDWLERLIEEKG 217
AH H+ H H ++VSSV I + +DLD ++ WL L +
Sbjct: 248 DAHDGHDTHAHRDHPSHDRHDDHDDHEHDASVSSVGIEVDADVDLDALEAWLAELRDADT 307
Query: 218 EDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRK 277
DL+RMKGIL+V G Q+YV QGVH ++ +AWG E R +++VFIGR+LD AL
Sbjct: 308 ADLFRMKGILAVHGRAQRYVLQGVHGVIELRAAQAWGT-EPRASRIVFIGRDLDRAALTD 366
Query: 278 GFKGCLA 284
F CLA
Sbjct: 367 RFHACLA 373
>gi|239906419|ref|YP_002953160.1| hypothetical protein DMR_17830 [Desulfovibrio magneticus RS-1]
gi|239796285|dbj|BAH75274.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 335
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/284 (39%), Positives = 168/284 (59%), Gaps = 10/284 (3%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
++NNGC+CC+VRGDL+++L LAK++ G +D +++ETTGLA PA +I+TF DE
Sbjct: 59 LMNNGCICCSVRGDLIRVLSGLAKRR-GAYDAVLVETTGLADPAAIIQTFSMDEDTGDAF 117
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
+LD V+T+VD+ H +H E + +A+EQV Y D I+LNK DLV E EL + + I
Sbjct: 118 RLDSVVTVVDALHFRRHAAENR------QALEQVVYGDLILLNKTDLVPEAELADIRQAI 171
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN A V V MD +L +DL R+ S + + E H
Sbjct: 172 SRINDTAQVLETTRCQVPMDVLLDRNAFDLSRLPLGQPAAGSAPGGL---APYRPEEDHQ 228
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
H H+HD + S++ + LD D++ ++L L+ KG+D+YR KGIL+V+G++Q+++F G
Sbjct: 229 HGHVHDHGIQSLSFTLDAPLDPDKLGEFLRTLLASKGQDIYRSKGILAVAGAKQRFIFHG 288
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
VH L+ G W E R ++ VFIGR+LD +L G GC A
Sbjct: 289 VHMYLETAWGTPWAEGETRQSRAVFIGRDLDRKSLEDGLAGCAA 332
>gi|302382140|ref|YP_003817963.1| cobalamin synthesis protein P47K [Brevundimonas subvibrioides ATCC
15264]
gi|302192768|gb|ADL00340.1| cobalamin synthesis protein P47K [Brevundimonas subvibrioides ATCC
15264]
Length = 377
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 181/325 (55%), Gaps = 51/325 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCTVRGDL++++ L K+++ FD I++ETTGLA P PV +TF DE V
Sbjct: 62 MNNGCVCCTVRGDLIRVVAGLMKRQKPGAPAFDAIIVETTGLADPGPVAQTFFVDEDVKA 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
KLD V LVD+ H M L++ + EA EQVA+ADRIILNK+DL T EL ++
Sbjct: 122 KTKLDSVTALVDAHHVMARLDDSR------EAREQVAFADRIILNKVDLATPEELFAVEA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE- 177
R++ +N +AP+ A+ +V +D VLG+ G+DLERI +H+ H E+ H H E
Sbjct: 176 RLRALNPLAPILRAERANVPLDQVLGLHGFDLERI---LHIHPEFANPAHGEAGHVHDEH 232
Query: 178 --------------------------------------GHHHNHMHDSAVSSVTIVSEGT 199
H H + +++ +
Sbjct: 233 CGHDHHAHDHDHDHDHHGHDHAHTPNGSDGSDGVSTPAEGPRGHSHADDIKGISLSLDRP 292
Query: 200 LDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKR 259
++ + WL++L+ ++G+++ R KGI+ V G +++ VFQ VH L+G + WG E+R
Sbjct: 293 MNGAKFTQWLDQLLGQQGQNILRAKGIIDVQGEDRRLVFQAVHMILEGDLQREWGATERR 352
Query: 260 INKLVFIGRNLDETALRKGFKGCLA 284
++ VFIGR+LDETAL+ GF+ C A
Sbjct: 353 WSRAVFIGRDLDETALKAGFEACAA 377
>gi|398852185|ref|ZP_10608853.1| putative GTPase, G3E family [Pseudomonas sp. GM80]
gi|398244833|gb|EJN30368.1| putative GTPase, G3E family [Pseudomonas sp. GM80]
Length = 351
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/283 (40%), Positives = 180/283 (63%), Gaps = 7/283 (2%)
Query: 4 NGCLCCT--VRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
NGC+CCT VR DLV+++ +L + + DHI+IET+GLA P PV ++F ++ ++ V+
Sbjct: 73 NGCVCCTAEVREDLVRIVRELVARPV-RLDHILIETSGLADPYPVAQSFFINDPIADEVE 131
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD+KH QHL +++ V N+AV+Q+ ADRI++NK+DLV+ E+ L +I+
Sbjct: 132 LDAIVTMVDAKHIAQHLEDLQLDGVDNQAVDQIVCADRIVINKVDLVSPDEVQILRGKIR 191
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA A + + + +D+ +LG+G ++ + E+ D H H + H E
Sbjct: 192 GLNATADLVTSTHAQIDLTKILGIGAFECTQKLMEIGADQHDHHDHDHHAEHSIEE---Q 248
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+H HD +VSSV I +G ++L W+ L + ++LYRMKG+L+V+ +Q+YV QGV
Sbjct: 249 DHQHDPSVSSVGIAVDGAVNLIAFHRWISELRSSQADNLYRMKGVLAVANEDQRYVLQGV 308
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
HS ++ AWG E R +K+VFIGR+LD AL +GF CLA
Sbjct: 309 HSLVEFRASTAWGT-EPRSSKIVFIGRDLDRAALNQGFAACLA 350
>gi|298292798|ref|YP_003694737.1| cobalamin synthesis protein P47K [Starkeya novella DSM 506]
gi|296929309|gb|ADH90118.1| cobalamin synthesis protein P47K [Starkeya novella DSM 506]
Length = 324
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/283 (40%), Positives = 169/283 (59%), Gaps = 23/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++K G FD I++ETTGLA PAPV +TF DE V
Sbjct: 65 MNNGCICCTVRGDLIRIIDGLLRRK-GDFDGIIVETTGLADPAPVAQTFFVDETVGAKTA 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLV+ETEL + RI+
Sbjct: 124 LDAVVTVADAKWLKDRLKDAP------EAKNQIAFADVILLNKTDLVSETELKDVEMRIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + + + +D VLG G +DL+RI + +D EG H
Sbjct: 178 AINPFARIHRTQKSDIAIDKVLGQGAFDLDRITA---IDPDFL------------EGGH- 221
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
H HD + S + S+ LD D+ W++ L +++G ++ R KGIL+ ++VFQGV
Sbjct: 222 KHFHDEDMQSFSFSSDKPLDPDKFFPWIQELTQKEGPNILRSKGILAFKDDPDRFVFQGV 281
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H LDG + W DE +++++VFIGR+LD+ AL GF+ C+A
Sbjct: 282 HMILDGDHQRPWRDDEAKLSRIVFIGRHLDQKALEAGFRACVA 324
>gi|348676888|gb|EGZ16705.1| hypothetical protein PHYSODRAFT_248037 [Phytophthora sojae]
Length = 463
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/307 (39%), Positives = 181/307 (58%), Gaps = 30/307 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKK--QGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+NNGC+CC+VRGDLV+++ Q+ K+ + Q D I+IETTG+A P PV++TF + LV+
Sbjct: 85 MNNGCICCSVRGDLVRLIAQILKRNGDRNQLDGIIIETTGMADPGPVVQTFFAEPLVAAT 144
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRF-VVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+LDG+IT+VD+KH +QHL +P V +E EQ+A+ADR++LNK DLV+ EL +
Sbjct: 145 CELDGIITVVDAKHILQHL---RPGAGVEHECQEQIAFADRVLLNKTDLVSSAELQEVHT 201
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERI------------------DSEVHVD 160
RI+ IN+ + ++ VD +L V +DL+ I H D
Sbjct: 202 RIRDINSAVSITECQHCRVDPALLLNVQTFDLDSILKRQPDFLKTEKDSHSHEHEHHHQD 261
Query: 161 NSHCATHH---HESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG 217
+ H HE H H GH H H S VSSV + + + +++W++ L+E +G
Sbjct: 262 DKKGGHDHEAKHEGEHRHGGGHRHKH---SLVSSVGLSLSDPILVALLEEWIDDLLETEG 318
Query: 218 EDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRK 277
+DL R KG+++V+G +++YVFQGVH +G W P E R + VFIG+NLD AL +
Sbjct: 319 DDLLRYKGVVNVAGIDRKYVFQGVHKLFNGRFADNWAPGETRETRFVFIGKNLDREALTE 378
Query: 278 GFKGCLA 284
GF C A
Sbjct: 379 GFLACRA 385
>gi|410462292|ref|ZP_11315880.1| putative GTPase, G3E family [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409984588|gb|EKO40889.1| putative GTPase, G3E family [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 336
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 169/288 (58%), Gaps = 17/288 (5%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
++NNGC+CC+VRGDL+++L LAK++ G +D +V+ETTGLA PA +I+TF DE
Sbjct: 59 LMNNGCICCSVRGDLIRVLSGLAKRR-GAYDAVVVETTGLADPAAIIQTFSMDEDTGDAF 117
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
+LD V+T+VD+ H +H E + +A+EQV Y D I+LNK DLV E EL + + I
Sbjct: 118 RLDSVVTVVDALHFRRHAAENR------QALEQVVYGDLILLNKTDLVPEAELADIRQAI 171
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERID----SEVHVDNSHCATHHHESAHGHH 176
IN A V V MD +L +DL R+ + + A + E
Sbjct: 172 ARINDTAQVLETTRCQVPMDVLLDRKAFDLTRLPLGQPAPSGLAQGGLAPYRPE------ 225
Query: 177 EGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQY 236
E H H H+HD + S++ + LD D++ ++L L+ KG+D+YR KGIL V+G++Q++
Sbjct: 226 EDHKHGHVHDHGIQSLSFTLDAPLDPDKLGEFLRTLLASKGQDIYRSKGILDVAGAKQRF 285
Query: 237 VFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+F GVH L+ G W E R ++ VFIGR+LD +L G GC A
Sbjct: 286 IFHGVHMYLETAWGTPWAEGETRQSRAVFIGRDLDRASLEDGLAGCAA 333
>gi|421471909|ref|ZP_15920149.1| CobW/P47K family protein [Burkholderia multivorans ATCC BAA-247]
gi|400224301|gb|EJO54550.1| CobW/P47K family protein [Burkholderia multivorans ATCC BAA-247]
Length = 378
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 119/307 (38%), Positives = 179/307 (58%), Gaps = 27/307 (8%)
Query: 2 VNNGCLCC--TVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+ NGC+CC VR DLV+++ L + + DHI++ET+GLA P PV +TF D+ +++
Sbjct: 70 MTNGCVCCVGAVREDLVRIVRMLVARPD-RLDHIIVETSGLADPYPVAQTFFLDDPIAKE 128
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
V LD V+T+VD+KH HL+++ N+AV+Q+ ADRI++NK+DLV ++ SL+ R
Sbjct: 129 VALDAVVTMVDAKHIRAHLDDLVLDGRDNQAVDQIVCADRIVINKVDLVDAADVESLSAR 188
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERI---------DSEVHVDNSHCATHHHE 170
++ +NA A + + Y VD+D +LGVG + +I D++ H D H H
Sbjct: 189 LRELNATAEIVTSSYAQVDLDRILGVGANEFAQILVESDGLHADTDAHADG-HAEEHAAH 247
Query: 171 SAHGHHEGHHHNHMHD-------------SAVSSVTIVSEGTLDLDEVDDWLERLIEEKG 217
AH H+ H H ++VSSV I + +DLD ++ WL L +
Sbjct: 248 DAHDGHDTHAHRDHPSHDRHDDHDDHEHDASVSSVGIEVDADVDLDALEAWLAELRDADT 307
Query: 218 EDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRK 277
+L+RMKGIL+V G Q+YV QGVH ++ +AWG E R +++VFIGR+LD AL
Sbjct: 308 ANLFRMKGILAVHGRAQRYVLQGVHGVIELRAAQAWGT-EPRASRIVFIGRDLDRAALTD 366
Query: 278 GFKGCLA 284
F CLA
Sbjct: 367 RFHACLA 373
>gi|404319527|ref|ZP_10967460.1| cobalamin biosynthesis protein [Ochrobactrum anthropi CTS-325]
Length = 361
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/301 (38%), Positives = 178/301 (59%), Gaps = 22/301 (7%)
Query: 2 VNNGCLCCTV--RGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+ NGC+CC R DL++++ QL + + + DHI+IET+GLA P PV +TF D+ +
Sbjct: 65 MTNGCVCCVAEARDDLLRVIRQLLARPE-RLDHIIIETSGLADPYPVAQTFFLDDPIRNE 123
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
LDGVITLVD KH QHL+++ + N+AV+Q+ ADRI+LNK+DL + ++ ++ R
Sbjct: 124 TNLDGVITLVDVKHIRQHLDDIHLDGIDNQAVDQIVCADRIVLNKVDLAQDADIADVSRR 183
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHVDNSHCATHHHESAHGHHEG 178
I+ +N A + L+ Y +D+ +LG+ +D R + +E+ D H H+H S GH +G
Sbjct: 184 IRQLNETADIVLSSYAQIDLTKILGLAAFDRNRKMAAEIDFD-WHVHNHNHHS-DGHGDG 241
Query: 179 H---------------HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRM 223
H +H HD++V+SV I G +D ++ W++ L + E+L+RM
Sbjct: 242 HVHDHEDHGHEHAWLGDASHTHDTSVTSVGIEFPGNMDPQKISRWVQELKRQNNENLFRM 301
Query: 224 KGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
KGI SV + YV GVH+ ++ P W DE R NK++FIGRNLD +L+ + C
Sbjct: 302 KGIFSVQDDDYCYVLHGVHNEIEFRPNHPWAGDE-RSNKMIFIGRNLDRASLQARIEACR 360
Query: 284 A 284
A
Sbjct: 361 A 361
>gi|424875430|ref|ZP_18299092.1| putative GTPase, G3E family [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393171131|gb|EJC71178.1| putative GTPase, G3E family [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 324
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 113/285 (39%), Positives = 168/285 (58%), Gaps = 31/285 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVR DL+ + L + + Q D +IET+GLA PAPVI++F D+++S ++
Sbjct: 60 LNNGCICCTVRDDLIAAIRALLQSGR-QIDRFIIETSGLADPAPVIQSFILDDVLSARLE 118
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD++H L + EAVEQ+++AD ++LNKIDLV E L + ++
Sbjct: 119 LDAIVTVVDARHIEGQLAQ-------EEAVEQISFADVLLLNKIDLVDEDHLLQVERDLR 171
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER---IDSEVHVDNSHCATHHHESAHGHHEG 178
N +A + K V + V+GVG +DL+ ID ++
Sbjct: 172 RRNPLARIIPTKDCGVAFEDVVGVGAFDLKNVLAIDPQIL-------------------- 211
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH HD + V + LD ++ WL RL+++ G DL+RMKG+LS +G ++YV
Sbjct: 212 EEHNHEHDQTIGCVAFREQEPLDPVALNSWLTRLVQDIGADLFRMKGVLSFAGEARRYVL 271
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
G+H TL+G PGK W P E R + +VFIGRNLDE LR GF+ C+
Sbjct: 272 HGIHMTLEGRPGKVWQPSEVRSSDIVFIGRNLDEEMLRAGFERCI 316
>gi|158425424|ref|YP_001526716.1| cobalamin synthesis protein [Azorhizobium caulinodans ORS 571]
gi|158332313|dbj|BAF89798.1| putative cobalamin synthesis protein [Azorhizobium caulinodans ORS
571]
Length = 329
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 109/281 (38%), Positives = 169/281 (60%), Gaps = 25/281 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+ + Q D I+IET+GLA PAPVI++F DE++ + +
Sbjct: 60 LNNGCVCCTVRGDLIAAM-QGVLASGRPIDRIIIETSGLADPAPVIQSFMLDEVLRERLA 118
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD++H + + ++EA EQ+ +AD ++LNKIDLV E L + + ++
Sbjct: 119 LDAIVTVVDARH-------ITDQIALDEAREQICFADVLLLNKIDLVDEASLAATQDMLR 171
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+N +A + + +V D VL V +DL + + VD A H HE
Sbjct: 172 RLNPLARIIRTQACAVPRDAVLDVRAFDLR---NALAVDPEILADHAHE----------- 217
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD++++ V + LD + W+ RL++ G+DL+R+KG+L+ + ++YVF GV
Sbjct: 218 ---HDASIAYVALREATQLDPAAFNIWINRLVQAAGKDLFRIKGVLAFAEEPRRYVFHGV 274
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
H TL+G PG+AW DE R +++VFIGRNLDE ALR+ C
Sbjct: 275 HMTLEGRPGRAWRADEARCSEIVFIGRNLDEAALRRSLDAC 315
>gi|452974383|gb|EME74203.1| cobalamin synthesis protein [Bacillus sonorensis L12]
Length = 329
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 123/286 (43%), Positives = 175/286 (61%), Gaps = 25/286 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCTVRGDL+++L L QG FD ++IETTGLA PAPV +TF D+L+S+
Sbjct: 65 MNNGCICCTVRGDLIRILRTLVFSMDQGNVHFDRVLIETTGLADPAPVAQTFLMDQLLSE 124
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
++D +IT+VDSKH +HL+ +EA EQ+A+AD IILNK DLV+ EL SL
Sbjct: 125 KFEVDSIITVVDSKHVTRHLD------CRDEAQEQIAFADVIILNKTDLVSNDELKSLER 178
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ +IN A + A+ ++++ +LG+ +D+ +H H
Sbjct: 179 RLANINPTAKMLYARDCNINLRDILGIHTFDV----------------NHKLEIDPHFLE 222
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HH+H HD VSS+ E LDL +VD W+ L+ EKGEDL R KGIL + G E + VF
Sbjct: 223 DHHHHHHDDKVSSIAFREEKPLDLAKVDHWMGYLVREKGEDLLRYKGILYIKGVENRIVF 282
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QG+H G P + W +E R ++LVFIG++L++ L + FK C+A
Sbjct: 283 QGLHMLFSGRPDRKWKENETRQSELVFIGKDLNKEELEQQFKNCIA 328
>gi|410471402|ref|YP_006894683.1| hypothetical protein BN117_0640 [Bordetella parapertussis Bpp5]
gi|408441512|emb|CCJ47973.1| conserved hypothetical protein [Bordetella parapertussis Bpp5]
Length = 340
Score = 216 bits (550), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 117/282 (41%), Positives = 175/282 (62%), Gaps = 9/282 (3%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+ +L +L ++ G+FD IV+ETTG+A PAPV++TF DE V + +
Sbjct: 64 MNNGCICCTVRGDLIGILHKLLRRP-GRFDAIVVETTGVADPAPVVQTFMMDEEVREKTE 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VIT+VD+KH L + + EA +Q+ YAD +++NK+DLV+ E + R+
Sbjct: 123 LDAVITMVDAKHFPLRLADSQ------EAEDQIVYADVVLINKVDLVSAGEADQVQRRVA 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN A + +D+ +L +G +DL+R ++ E + C H AH H
Sbjct: 177 AINPYAACHRVQRAEIDLARILSIGAFDLQRCVELEARAAPAGCGHEHEHDAHCQGGTDH 236
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
H+H H+ +V SV++ + G LD W+ L+E++G D+ RMKGIL++ ++Y+ QG
Sbjct: 237 HHHHHEISVKSVSLQA-GALDGRRFFPWIHSLVEKQGPDILRMKGILALDDDARRYIIQG 295
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
VH ++G +AW DE R +KLVFIGR LD ALR GF+ C
Sbjct: 296 VHMIVEGEHQRAWRDDEPRASKLVFIGRGLDAQALRAGFEAC 337
>gi|398975528|ref|ZP_10685637.1| putative GTPase, G3E family [Pseudomonas sp. GM25]
gi|398140205|gb|EJM29177.1| putative GTPase, G3E family [Pseudomonas sp. GM25]
Length = 351
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 114/283 (40%), Positives = 181/283 (63%), Gaps = 7/283 (2%)
Query: 4 NGCLCCT--VRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
NGC+CCT VR DLV+++ +L + + DHI+IET+GLA P PV ++F ++ +++ V+
Sbjct: 73 NGCVCCTAEVREDLVRIVRELVARPV-RLDHILIETSGLADPYPVAQSFFINDPIAEEVE 131
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD+KH QHL +++ V N+AV+Q+ ADRI++NK+DLV+ E+ +L +I+
Sbjct: 132 LDAIVTMVDAKHIAQHLEDLQLDGVDNQAVDQIVCADRIVINKVDLVSAEEVETLRGKIR 191
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA A + + + +D+ +LG+G ++ + E+ D HH+ H E H
Sbjct: 192 GLNATADLVTSTHAQIDLSKILGIGAFECTQKLMEIGADQHDHDHDHHDHDHHAEEPDHE 251
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD +VSSV I +G ++L W+ L + ++LYRMKG+L+V+ +Q+YV QGV
Sbjct: 252 ---HDPSVSSVGIAVDGAVNLMAFHRWISELRSAQADNLYRMKGVLAVANEDQRYVLQGV 308
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
HS ++ AWG E R +K+VFIGR+LD AL +GF CLA
Sbjct: 309 HSLVEFRASTAWG-SEPRSSKIVFIGRDLDRAALNQGFAACLA 350
>gi|170750084|ref|YP_001756344.1| cobalamin synthesis protein P47K [Methylobacterium radiotolerans
JCM 2831]
gi|170656606|gb|ACB25661.1| cobalamin synthesis protein P47K [Methylobacterium radiotolerans
JCM 2831]
Length = 335
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 114/283 (40%), Positives = 170/283 (60%), Gaps = 23/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ G+FD I++ETTGLA PAPV +TF D+ V + +
Sbjct: 76 MNNGCVCCTVRGDLIRIMDGLVKRR-GKFDAIIVETTGLADPAPVAQTFFVDQDVGEAAR 134
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLV+ +L + I+
Sbjct: 135 LDAVVTVADAKWLSDRLKDAP------EAKNQIAFADVILLNKSDLVSPADLDRVEAEIR 188
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN +A + + +V +D VL +DL+RI +V D HHH
Sbjct: 189 TINPLAKLHRTQNCAVPLDAVLERNAFDLDRI-LDVEPDFLEAGHHHH------------ 235
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HDS + SV+ EG +D D+ W+ L + +G D+ R KGI++ +++VFQGV
Sbjct: 236 ---HDSDIRSVSAKIEGAVDPDKFMPWISNLTQSQGPDILRCKGIVAFPDEPKRFVFQGV 292
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H LDG WG DE+R++++VFIGRNLD A+++GF+ C A
Sbjct: 293 HMILDGDVQGDWGKDEERVSRVVFIGRNLDPAAIKEGFEACRA 335
>gi|115526782|ref|YP_783693.1| cobalamin synthesis protein, P47K [Rhodopseudomonas palustris
BisA53]
gi|115520729|gb|ABJ08713.1| cobalamin synthesis protein, P47K [Rhodopseudomonas palustris
BisA53]
Length = 350
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 122/292 (41%), Positives = 171/292 (58%), Gaps = 16/292 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV++L L K++ G+FD I++ETTGLA PAPV +TF DE V +
Sbjct: 65 MNNGCICCTVRGDLVRILGGLMKRR-GKFDAIIVETTGLADPAPVAQTFFVDEDVQNNAR 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLVT+ EL + RI+
Sbjct: 124 LDAVVTVADAKWLSDRLKDAP------EAKNQIAFADVIVLNKTDLVTKAELAEVEARIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI---------DSEVHVDNSHCATHHHESA 172
IN A + + V + VL G +DL+RI + H + H
Sbjct: 178 GINPYARLHHTERCQVALADVLDRGAFDLDRILEIEPEFLDTGDGHDHDHEHCDDHAHCG 237
Query: 173 HGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGS 232
H H H H HD + S+ + SE +D + WL++LI +G + R KGILS G
Sbjct: 238 HDHSHDHGLKHYHDEHMQSLALSSEQPVDPAKFMPWLQQLIAAEGGKILRSKGILSFRGD 297
Query: 233 EQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+ +YVFQGVH L+G +AW DE+R++++VFIGR+L E A+R GF C+A
Sbjct: 298 DDRYVFQGVHMMLEGDHQRAWKDDEQRLSRVVFIGRDLPEQAIRDGFANCIA 349
>gi|33595373|ref|NP_883016.1| hypothetical protein BPP0675 [Bordetella parapertussis 12822]
gi|33599672|ref|NP_887232.1| hypothetical protein BB0682 [Bordetella bronchiseptica RB50]
gi|412340050|ref|YP_006968805.1| hypothetical protein BN112_2753 [Bordetella bronchiseptica 253]
gi|427812918|ref|ZP_18979982.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|33565451|emb|CAE40084.1| conserved hypothetical protein [Bordetella parapertussis]
gi|33567269|emb|CAE31182.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
gi|408769884|emb|CCJ54670.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
gi|410563918|emb|CCN21456.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
Length = 340
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/282 (41%), Positives = 175/282 (62%), Gaps = 9/282 (3%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+ +L +L ++ G+FD IV+ETTG+A PAPV++TF DE V + +
Sbjct: 64 MNNGCICCTVRGDLIGILHKLLRRP-GRFDAIVVETTGVADPAPVVQTFMMDEEVREKTE 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VIT+VD+KH L + + EA +Q+ YAD +++NK+DLV+ E + R+
Sbjct: 123 LDAVITMVDAKHFPLRLADSQ------EAEDQIVYADVVLINKVDLVSAGEADQVQRRVA 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN A + +D+ +L +G +DL+R ++ E + C H AH H
Sbjct: 177 AINPYAACHRVQRAEIDLARILSIGAFDLQRCVELEARAAPAGCGHEHEHDAHCQGGTDH 236
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
H+H H+ +V SV++ + G LD W+ L+E++G D+ RMKGIL++ ++Y+ QG
Sbjct: 237 HHHHHEISVMSVSLQA-GALDGRRFFPWIHSLVEKQGPDILRMKGILALDDDARRYIIQG 295
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
VH ++G +AW DE R +KLVFIGR LD ALR GF+ C
Sbjct: 296 VHMIVEGEHQRAWRDDEPRASKLVFIGRGLDAQALRAGFEAC 337
>gi|159469231|ref|XP_001692771.1| predicted protein [Chlamydomonas reinhardtii]
gi|158278024|gb|EDP03790.1| predicted protein [Chlamydomonas reinhardtii]
Length = 320
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 176/288 (61%), Gaps = 37/288 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+K+L +L K+ + D ++IETTGLA PAPV +TF D+ V + +
Sbjct: 64 MNNGCICCTVRGDLIKILRRLRKRDR-DIDLVLIETTGLADPAPVAQTFFVDDEVKEAYR 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+ D+ H +QHL+E KP QVA+AD ++LNK+DLV+ + +T RI+
Sbjct: 123 LDAILTVADAAHLLQHLDEHKPE-------GQVAFADVVLLNKVDLVSAEQQAEVTRRIR 175
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN+ A + V ++ +LG+G + LER+ +E
Sbjct: 176 AINSTAQLHACVRSDVPLESLLGLGAFSLERVMAE----------------------EPD 213
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HDS+V SV + G L + ++ WL RL+ E+G DL+R KG+LS++G++ +YVFQGV
Sbjct: 214 FLTHDSSVGSVGLTLPGRLHMGRLNAWLSRLLRERGTDLFRSKGLLSIAGTDDRYVFQGV 273
Query: 242 H------STLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H S+ DG G+ W P E+R+++LVFIGRNLD + L G + CL
Sbjct: 274 HMLMGFASSADGV-GRPWAPGEERVSRLVFIGRNLDRSELEAGLRACL 320
>gi|223995857|ref|XP_002287602.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976718|gb|EED95045.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 391
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/283 (43%), Positives = 176/283 (62%), Gaps = 20/283 (7%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CCTVRGDLV+ L +L KK + +FD ++IETTGLA PAPV++TF D+ + LD
Sbjct: 65 NGCICCTVRGDLVEALKKLHKKVK-KFDGVIIETTGLADPAPVVQTFFIDDAIQDMYSLD 123
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIKHI 123
VITLVD+KH ++ L E KP V NE+VEQV +ADRIILNKIDLV E L + ++K +
Sbjct: 124 SVITLVDAKHILERLAEEKPEGVENESVEQVCFADRIILNKIDLVDEKTLVEIETKVKEL 183
Query: 124 NAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHHNH 183
N A + +KY V +L + + L+R+ + + + A H
Sbjct: 184 NPSASIIRSKYSKVSPKDLLNIEAFSLKRV---LDFEPNFLADDQE-------------H 227
Query: 184 MHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHS 243
HD +VSSV+ +G ++L+ +++W+ RLI+E+G +LYR KG+L+V G ++++VFQGV
Sbjct: 228 QHDQSVSSVSCRVKGNVNLEMLNNWIGRLIQEEGANLYRYKGVLAVKGMKEKFVFQGVGM 287
Query: 244 TLDG--CPGKAW-GPDEKRINKLVFIGRNLDETALRKGFKGCL 283
DG G+ W ++ R N VFIG+NL L+ FK CL
Sbjct: 288 LFDGAFAAGQYWIEAEDARENVFVFIGKNLKGDWLKDCFKACL 330
>gi|116255328|ref|YP_771161.1| putative CobW family protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115259976|emb|CAK03073.1| putative CobW family protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 332
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 168/282 (59%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVR DL+ + L + + Q D +IET+GLA PAPVI++F D+++S ++
Sbjct: 68 LNNGCICCTVRDDLIAAIRALLQSGR-QIDRFIIETSGLADPAPVIQSFILDDVLSARLE 126
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD++H L + EAVEQ+++AD ++LNKIDLV E L + ++
Sbjct: 127 LDAIVTVVDARHIEGQLAQ-------EEAVEQISFADVLLLNKIDLVDEDHLLQVERDLR 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
N +A + K V + V+G+G +DL+ + + +D HE
Sbjct: 180 RRNPLARIIPTKDCGVAFEDVVGLGAFDLKNV---LAIDPQILEEQEHE----------- 225
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD + V + LD ++DWL RL+++ G DL+RMKG+LS +G ++YV G+
Sbjct: 226 ---HDQTIGCVAFREQEPLDPVALNDWLTRLVQDIGADLFRMKGVLSFAGEARRYVLHGI 282
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H TL+G PGK W P E R + +VFIGRNLDE LR GF+ C+
Sbjct: 283 HMTLEGRPGKVWQPSEVRSSDIVFIGRNLDEEMLRAGFERCI 324
>gi|92118886|ref|YP_578615.1| cobalamin synthesis protein, P47K [Nitrobacter hamburgensis X14]
gi|91801780|gb|ABE64155.1| cobalamin synthesis protein, P47K [Nitrobacter hamburgensis X14]
Length = 361
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/298 (42%), Positives = 177/298 (59%), Gaps = 23/298 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV++L L K+K G+FD I++ETTGLA PAPV +TF DE V +
Sbjct: 71 MNNGCVCCTVRGDLVRILEGLMKRK-GKFDAIIVETTGLADPAPVAQTFFVDEDVQNNAR 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K + L + EA Q+A+AD I+LNK DLV++ EL + RI+
Sbjct: 130 LDAVVTVADAKWLSERLKDAP------EAKNQIAFADVIVLNKTDLVSKPELAEVEARIR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVD---------------NSHCAT 166
IN A + + V + VL G +DL+RI E+ D + H
Sbjct: 184 GINPYAKLHRTERCQVALSDVLERGAFDLDRI-LELEPDFLKEDDHDHHHDHDDHDHDHD 242
Query: 167 HHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGI 226
HH HGH H H HD + S+++ S+ LD D+ WL+ L+ +G+ + R KGI
Sbjct: 243 HHGHDDHGHDHDHGLKHYHDEEMQSLSLHSDKPLDQDKFMPWLQELLAAEGQKILRSKGI 302
Query: 227 LSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
++ SG + +YVFQGVH L+G + W PDEKR ++LVFIGR L E +R GF+ C+A
Sbjct: 303 MAFSGDDDRYVFQGVHMMLEGSRQREWKPDEKRESRLVFIGRELPEALIRDGFQNCIA 360
>gi|296533562|ref|ZP_06896131.1| cobalamin synthesis protein/P47K family protein [Roseomonas
cervicalis ATCC 49957]
gi|296266099|gb|EFH12155.1| cobalamin synthesis protein/P47K family protein [Roseomonas
cervicalis ATCC 49957]
Length = 322
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/283 (39%), Positives = 171/283 (60%), Gaps = 24/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV++L L K++ G+FD I++ETTGLA PAPV +TF DE V + +
Sbjct: 63 MNNGCICCTVRGDLVRILGGLMKRR-GKFDGIIVETTGLANPAPVAQTFFMDEDVKRATR 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD+K+ + L + +EA EQ+A+AD I+LNK+DLV+E E + RI+
Sbjct: 122 LDAIVTVVDAKNLLARLEDS------SEAEEQIAFADLIVLNKMDLVSEDEAAEVERRIR 175
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A ++ A +V ++ V+G + LERI + + + HE
Sbjct: 176 AINPYAELQRATKSAVPVESVIGRDAFSLERI---LEREPDFLTSDEHE----------- 221
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
H+ V S++ +D ++ + W+ L++ KG+DL R KGIL+ G E ++ FQ V
Sbjct: 222 ---HNEDVMSMSFEVSKPIDAEKFNAWIGNLLQSKGQDLLRTKGILAYQGEENRFAFQAV 278
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG W + R +K+VFIGRNL+ LR+GF+GC+A
Sbjct: 279 HMIADGDFIGPWKEGDPRKSKIVFIGRNLNRPQLRRGFEGCVA 321
>gi|206564106|ref|YP_002234869.1| putative cobalamin biosynthesis protein [Burkholderia cenocepacia
J2315]
gi|444359508|ref|ZP_21160819.1| CobW/P47K family protein [Burkholderia cenocepacia BC7]
gi|444369059|ref|ZP_21168834.1| CobW/P47K family protein [Burkholderia cenocepacia K56-2Valvano]
gi|198040146|emb|CAR56129.1| putative cobalamin biosynthesis protein [Burkholderia cenocepacia
J2315]
gi|443599673|gb|ELT67932.1| CobW/P47K family protein [Burkholderia cenocepacia K56-2Valvano]
gi|443602012|gb|ELT70121.1| CobW/P47K family protein [Burkholderia cenocepacia BC7]
Length = 367
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 180/295 (61%), Gaps = 14/295 (4%)
Query: 2 VNNGCLCC--TVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+ NGC+CC VR DLV+++ L + + DHI++ET+GLA P PV +TF D+ +++
Sbjct: 70 MTNGCVCCVGAVREDLVRIVRMLVARPD-RLDHIIVETSGLADPYPVAQTFFLDDPIAKE 128
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
V LD V+T+VD+KH HL+++ N+AV+Q+ ADRI++NK+DLV T++G+LT R
Sbjct: 129 VALDAVVTMVDAKHIRAHLDDLVLDGRDNQAVDQIVCADRIVINKVDLVDATDVGALTAR 188
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSE---VHVDNSHCATHHHESAHGHH 176
++ +N+ A + + Y VD+D +LG+G + +I E + V+ H H H AHGH
Sbjct: 189 LRELNSTAEIVTSSYAQVDLDRILGIGANEFAQILVESDGLAVEAPHADEHEHTHAHGHD 248
Query: 177 EGHHHNHMHD-------SAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSV 229
H H ++VSSV I + +DLD ++ WL L +L+RMKGIL+V
Sbjct: 249 AHGDHPHDDHDDHHEHDASVSSVGIEVDADVDLDALEAWLGELRRADTANLFRMKGILAV 308
Query: 230 SGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
G Q+YV QGVH ++ +AWG E R +++VFIGR+LD AL F CLA
Sbjct: 309 QGRAQRYVLQGVHGVIELRAAQAWGC-EPRSSRIVFIGRDLDCAALTDRFHACLA 362
>gi|85715881|ref|ZP_01046859.1| Cobalamin synthesis protein, CobW [Nitrobacter sp. Nb-311A]
gi|85697288|gb|EAQ35168.1| Cobalamin synthesis protein, CobW [Nitrobacter sp. Nb-311A]
Length = 341
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/296 (41%), Positives = 176/296 (59%), Gaps = 21/296 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV++L L K+K G+FD I++ETTGLA PAPV +TF DE V + +
Sbjct: 53 MNNGCVCCTVRGDLVRILEGLMKRK-GKFDAIIVETTGLADPAPVAQTFFVDEDVQNHAR 111
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K + L + EA Q+A+AD I+LNK DLV+ L + RI+
Sbjct: 112 LDAVVTVADAKWLSERLKDAP------EAKNQIAFADVIVLNKTDLVSAPALADVEARIR 165
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVD-------------NSHCATHH 168
IN A + + V + VL G +DL+RI E+ D + H H
Sbjct: 166 GINPYAKLHRTERCQVALSDVLERGAFDLDRI-LELEPDFLANDGHDHHHHDHDHHDHDH 224
Query: 169 HESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILS 228
H H GH H HD + S+++ S+ L+ D+ WL+ L+ +G+ + R KGI++
Sbjct: 225 GHDHHDHDHGHGPKHYHDEEMQSLSLRSDKPLEQDKFMPWLQELLAAEGQKILRSKGIMA 284
Query: 229 VSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
SG + +YVFQGVH L+G + W PDEKR ++LVFIGR L E +R+GF+ C+A
Sbjct: 285 FSGDDDRYVFQGVHMMLEGSRQRPWKPDEKRESRLVFIGRELPEALIREGFQNCIA 340
>gi|77459654|ref|YP_349161.1| cobalamin synthesis protein/P47K [Pseudomonas fluorescens Pf0-1]
gi|77383657|gb|ABA75170.1| Cobalamin synthesis protein/P47K protein [Pseudomonas fluorescens
Pf0-1]
Length = 347
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 113/283 (39%), Positives = 181/283 (63%), Gaps = 11/283 (3%)
Query: 4 NGCLCCT--VRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
NGC+CCT VR DLV+++ +L + + DHI+IET+GLA P PV ++F ++ +++ V+
Sbjct: 73 NGCVCCTAEVREDLVRIVRELVARPV-RLDHILIETSGLADPYPVAQSFFINDPIAEEVE 131
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD+KH QHL +++ V N+AV+Q+ ADRI++NK+DLV+ E+ +L +I+
Sbjct: 132 LDAIVTMVDAKHIAQHLEDLQLDGVDNQAVDQIVCADRIVINKVDLVSAEEVETLRGKIR 191
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA A + + + +D+ +LG+G ++ + E+ D H H++ HE
Sbjct: 192 GLNATADLVTSTHAQIDLSKILGIGAFECTQKLMEIGADQHDHHDHGHQTEEPDHE---- 247
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD +VSSV I +G ++L W+ L + ++LYRMKG+L+V+ +Q+YV QGV
Sbjct: 248 ---HDPSVSSVGIAVDGAVNLMAFHRWISELRSSQADNLYRMKGVLAVANEDQRYVLQGV 304
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
HS ++ AWG E R +K+VFIGR+LD AL +GF CLA
Sbjct: 305 HSLVEFRASTAWG-SEPRSSKIVFIGRDLDRAALNQGFAACLA 346
>gi|421870466|ref|ZP_16302098.1| putative metal chaperone GTPase [Burkholderia cenocepacia H111]
gi|358069372|emb|CCE52976.1| putative metal chaperone GTPase [Burkholderia cenocepacia H111]
Length = 367
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 179/295 (60%), Gaps = 14/295 (4%)
Query: 2 VNNGCLCC--TVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+ NGC+CC VR DLV ++ L + + DHI++ET+GLA P PV +TF D+ +++
Sbjct: 70 MTNGCVCCVGAVREDLVWIVRMLVARPD-RLDHIIVETSGLADPYPVAQTFFLDDPIAKE 128
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
V LD V+T+VD+KH HL+++ N+AV+Q+ ADRI++NK+DLV T++G+LT R
Sbjct: 129 VALDAVVTMVDAKHIRAHLDDLVLDGRDNQAVDQIVCADRIVINKVDLVDATDVGALTAR 188
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSE---VHVDNSHCATHHHESAHGHH 176
++ +N+ A + + Y VD+D +LG+G + +I E + V+ H H H AHGH
Sbjct: 189 LRELNSTAEIVTSSYAQVDLDRILGIGANEFAQILVESDGLAVEAPHADEHEHTHAHGHD 248
Query: 177 EGHHHNHMHD-------SAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSV 229
H H ++VSSV I + +DLD ++ WL L +L+RMKGIL+V
Sbjct: 249 AHGDHPHDDHDDHHEHDASVSSVGIEVDADVDLDALEAWLGELRRADTANLFRMKGILAV 308
Query: 230 SGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
G Q+YV QGVH ++ +AWG E R +++VFIGR+LD AL F CLA
Sbjct: 309 QGRAQRYVLQGVHGVIELRAAQAWGC-EPRSSRIVFIGRDLDRAALTDRFHACLA 362
>gi|399090029|ref|ZP_10753895.1| putative GTPase, G3E family [Caulobacter sp. AP07]
gi|398028494|gb|EJL22003.1| putative GTPase, G3E family [Caulobacter sp. AP07]
Length = 369
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 120/308 (38%), Positives = 176/308 (57%), Gaps = 35/308 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K+K G FD I++ETTGLA P PV +TF D+ V
Sbjct: 72 MNNGCVCCTVRGDLIRVLQGLMKRKGG-FDAIIVETTGLADPGPVAQTFFVDDDVKARTY 130
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V +VD+KH + L + K EAVEQ+A+AD+I+LNK DLV+E +L + RIK
Sbjct: 131 LDSVTAVVDAKHILLRLGDSK------EAVEQIAFADQIVLNKTDLVSEDDLRHVEARIK 184
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAH-------- 173
IN +AP+ A+ +V +D ++G +DLERI ++ H E+ H
Sbjct: 185 RINPLAPIHRAQRSNVPLDAIIGKHSFDLERI---TELEPEFLNPGHGEAGHVHDEHCGH 241
Query: 174 -----------------GHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK 216
HH H + +HD V +++ + +D ++ WL L+ +
Sbjct: 242 DHHHHDHGHVHDEHCGHDHHGHDHKSDIHDDGVKGISLTLDRPVDGQKITVWLNELLARR 301
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
G D+ R KGI+ V G E++ VFQ VH L+G +AW +KR +++VFIGR+LDE L+
Sbjct: 302 GPDILRAKGIIDVRGEERRLVFQAVHMILEGDFQRAWTDKDKRYSRMVFIGRDLDEAELK 361
Query: 277 KGFKGCLA 284
GF+ A
Sbjct: 362 AGFEATAA 369
>gi|290984256|ref|XP_002674843.1| predicted protein [Naegleria gruberi]
gi|284088436|gb|EFC42099.1| predicted protein [Naegleria gruberi]
Length = 342
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 121/299 (40%), Positives = 180/299 (60%), Gaps = 35/299 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L +LAK+K +FD+I++ET+G+A PAPV +TF D+ +S+
Sbjct: 60 MNNGCICCTVRGDLIRILGRLAKRKD-KFDYILVETSGMADPAPVAQTFFVDDDISEQYY 118
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELG-SLTERI 120
LDG+IT+VD+KH +QHL E +P+ NE+VEQ+A+ADRIILNKIDL+ + E SL E
Sbjct: 119 LDGIITIVDAKHILQHLLEERPKDEENESVEQIAFADRIILNKIDLLKQDESSVSLEEVK 178
Query: 121 KHI---NAMAPVKLAKYGSV-DMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHH 176
KHI N AP+ + + D+ +L + +D+++I + +D
Sbjct: 179 KHIQSVNKFAPIIETNHSIIPDLSSLLNIRSFDVQKI---LQMDPDFLKDME-------- 227
Query: 177 EGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGIL--------- 227
H HD++V SV IV +G ++ WL L+ EKG D+YR KGI+
Sbjct: 228 ------HTHDTSVGSVAIVEKGMINQQLFSRWLRGLLSEKGADIYRSKGIVKSQELADED 281
Query: 228 -SVSGSEQQY--VFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
++ S +++ VFQGVH +D +NKLVFIG+NL+ L +GF+ CL
Sbjct: 282 SQITNSNEEFVMVFQGVHMMMDMKVMPVAKSKVGNVNKLVFIGKNLNRQELEQGFRNCL 340
>gi|323457045|gb|EGB12911.1| hypothetical protein AURANDRAFT_52124 [Aureococcus anophagefferens]
Length = 400
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 126/277 (45%), Positives = 170/277 (61%), Gaps = 20/277 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
V NGC+CCTVRGDLV+ L +LAKK +FD I+IETTGLA PAPV +TF DE +S+
Sbjct: 71 VMNGCICCTVRGDLVETLKKLAKKVA-KFDGIIIETTGLADPAPVAQTFFVDEDISKLYS 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVT-ETELGSLTERI 120
LD + + D+KH + L++ KP V NEAVEQ+A+AD+I+LNKIDLV E EL + RI
Sbjct: 130 LDCICAVTDAKHLVMRLDDEKPEGVENEAVEQLAFADKILLNKIDLVPEEAELAKIEARI 189
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-DSEVHVDNSHCATHHHESAHGHHEGH 179
K IN AP+ +V ++GV ++L+R+ D E A H
Sbjct: 190 KTINPQAPILRCTQSNVSWKEIIGVQAFNLDRVLDFEPEFLTDLDAEHQ----------- 238
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
HD VSSV++ EG L + + W+++LI+EKG DL+R KG+++V GSE +++FQ
Sbjct: 239 -----HDETVSSVSVKFEGELMVRGLSRWIDKLIQEKGADLFRYKGVMAVKGSEAKFIFQ 293
Query: 240 GVHSTLD-GCPGKAWGPDEKRINKLVFIGRNLDETAL 275
GV G W DEKR + VFIGRNLD+ AL
Sbjct: 294 GVGMLFTGGFSDFTWAADEKRECRFVFIGRNLDKKAL 330
>gi|167644168|ref|YP_001681831.1| cobalamin synthesis protein P47K [Caulobacter sp. K31]
gi|167346598|gb|ABZ69333.1| cobalamin synthesis protein P47K [Caulobacter sp. K31]
Length = 364
Score = 213 bits (542), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 120/314 (38%), Positives = 174/314 (55%), Gaps = 47/314 (14%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K+K G FD I++ETTGLA P PV +TF D+ V
Sbjct: 67 MNNGCVCCTVRGDLIRVLQGLMKRKNG-FDAIIVETTGLADPGPVAQTFFVDDDVKARTY 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V +VD+KH + L + K EAVEQ+A+AD+I+LNK DLV+E +L + RIK
Sbjct: 126 LDSVTAVVDAKHILLRLGDSK------EAVEQIAFADQIVLNKTDLVSEDDLRHVEARIK 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGH-- 179
IN +AP+ A+ +V ++ +LG +DLERI + AHG H GH
Sbjct: 180 RINPLAPIHRAQRSNVPLEAILGKHSFDLERI--------TELEPEFLNPAHGEH-GHVH 230
Query: 180 -----------------------------HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLE 210
H + +HD V +++ + +D ++ WL
Sbjct: 231 DEHCGHDHHHHDHGHVHDEHCGHDHHGHDHKSDIHDDGVKGISLTLDRPVDGQKITVWLN 290
Query: 211 RLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNL 270
L+ +G D+ R KGI+ V G E++ VFQ VH L+G + W +KR +++VFIGR+L
Sbjct: 291 DLLARRGPDILRAKGIIDVQGEERRLVFQAVHMILEGDFQRPWTEKDKRYSRMVFIGRDL 350
Query: 271 DETALRKGFKGCLA 284
DE L+ GF+ A
Sbjct: 351 DEAELKAGFEATAA 364
>gi|159485282|ref|XP_001700675.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272107|gb|EDO97913.1| predicted protein [Chlamydomonas reinhardtii]
Length = 341
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 180/288 (62%), Gaps = 32/288 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L +L K+K G+FD I+IETTGLA PAPVI+TF D+ +
Sbjct: 67 MNNGCVCCTVRGDLIRILNKLIKRK-GKFDAILIETTGLANPAPVIQTFFVDDDIKDACL 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QHL+E KP V +A+AD+++LNK DLV+ EL L RI+
Sbjct: 126 LDAVLTVVDAKHVTQHLDEEKPEGV-------IAFADKVLLNKTDLVSAEELHRLRHRIQ 178
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
H+N + +VD+ +LG+ + LE++ + +D H H+
Sbjct: 179 HMNKPVEIIECVRSNVDVGRLLGINAFSLEKL---LAMDPEFLHHHDHKHD--------- 226
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
V+SV +G +D+ +++ WL +L++E+G DLYR KGIL++ GS+ ++VFQGV
Sbjct: 227 -----DRVTSVGFEIDGEMDMPKLNMWLSKLLQERGPDLYRSKGILAIKGSDDKHVFQGV 281
Query: 242 H------STLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H S+ +G G+ W EKR++K+VFIG+NL+ L +G + CL
Sbjct: 282 HMLLQFSSSAEGV-GRPWREGEKRLSKVVFIGKNLNRKELLEGLQSCL 328
>gi|357030669|ref|ZP_09092613.1| hypothetical protein GMO_03130 [Gluconobacter morbifer G707]
gi|356415363|gb|EHH69006.1| hypothetical protein GMO_03130 [Gluconobacter morbifer G707]
Length = 328
Score = 213 bits (541), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 112/283 (39%), Positives = 171/283 (60%), Gaps = 24/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L +L +++ G+FD I++ETTGLA PAPV +TF DE + + +
Sbjct: 69 MNNGCICCTVRGDLIRILGKLLRRR-GRFDGIIVETTGLADPAPVAQTFFVDESIREKAR 127
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+ + MQ L+E EAV QVA+AD IILNK+DL E + R++
Sbjct: 128 LDAVVTVVDAFNVMQTLDESP------EAVNQVAFADVIILNKVDLADEPRRQEIIARLR 181
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
INA+AP+ A++G V + +L GG+DL+R + + ES H
Sbjct: 182 QINAVAPIHEAQHGGVKLTDILDRGGFDLQRALATM--------PDFLESDH-------- 225
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
H H+ ++S+++ + +D W+ L++E+G D+ R KGIL G Q++ FQ V
Sbjct: 226 -HSHEEGITSISLSVKEPIDQRRFQAWISALLQEQGGDILRSKGILHFKGENQRFAFQAV 284
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG + E + ++LVFIG NL+ LR+GF+ C+A
Sbjct: 285 HMMADGDFIGPFREGESQESRLVFIGHNLNRPRLRRGFESCIA 327
>gi|339018660|ref|ZP_08644790.1| cobalamin synthesis protein CobW [Acetobacter tropicalis NBRC
101654]
gi|338752264|dbj|GAA08094.1| cobalamin synthesis protein CobW [Acetobacter tropicalis NBRC
101654]
Length = 330
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 168/281 (59%), Gaps = 24/281 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K++ G+FD I+IETTGLA PAPV +TF DE V +
Sbjct: 71 MNNGCICCTVRGDLIRILGGLMKRR-GKFDGIIIETTGLADPAPVAQTFFADEDVRAKTR 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+ + +Q L E EA +Q+A+AD +ILNK DLV + +L + + ++
Sbjct: 130 LDAVVTVVDALNILQTLKESP------EAHQQIAFADVMILNKTDLVDDAQLKQVEDTLR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
INA+AP+ A+ G+V + V+ GG+DL+R+ E D HHHE
Sbjct: 184 SINAIAPIHRAQKGNVKLTDVMDRGGFDLQRV-LEHMPDFLENPEHHHEED--------- 233
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+SSV++ + LD + W+ L++EKG D+ R KGIL+ G ++ FQ V
Sbjct: 234 -------LSSVSLTVKTPLDAGKFQMWIGALLQEKGADILRTKGILNFEGQPDRFAFQAV 286
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
H DG W E R ++LVFIGRNL+ LR+G + C
Sbjct: 287 HMMADGNNIGPWKEGEPRESRLVFIGRNLNRPQLRRGLESC 327
>gi|440802699|gb|ELR23628.1| cobalamin biosynthesis protein CobW [Acanthamoeba castellanii str.
Neff]
Length = 385
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 173/295 (58%), Gaps = 19/295 (6%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPA----------PVIETFCTD 53
NGC+CC+VRGDLV + L +KK+ +FD++ IE +GLA PA P+ TF D
Sbjct: 96 NGCVCCSVRGDLVLTIENLMQKKE-KFDYVFIEPSGLADPACITVVKTTLGPLASTFWLD 154
Query: 54 ELVSQYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETEL 113
+ + + LD +IT+VD+KH QHL E KP+ V+NEA QVA+ADRII+NKIDLV+ L
Sbjct: 155 DELESDLYLDSIITIVDAKHFKQHLEEEKPKGVINEAQRQVAFADRIIVNKIDLVSAEYL 214
Query: 114 GSLTERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHVDNSHCATHHHESA 172
L +I N+ A + A VD+D +L + +D+ R +D + H+ +S C+
Sbjct: 215 QDLEGQILSHNSAATIVRATRAEVDLDSILNINAFDMTRALDIDPHLKSSCCSDAEKA-- 272
Query: 173 HGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWL-ERLIEEKGEDLYRMKGILSVSG 231
G HE H H H+HD +V +V EG L+LD+ WL E L EEKG D++RMKGI+S+
Sbjct: 273 -GDHE-HAHTHLHDDSVVTVNFTVEGDLELDKFKAWLAELLWEEKGNDIFRMKGIISIKD 330
Query: 232 SEQQYVFQGVHSTLDGCPGKA-WG-PDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+ +Y Q VHS D W P + R +V IGR+LD+ L + L+
Sbjct: 331 EQNKYALQSVHSLFDLEQSSVEWDLPRQVRATTMVVIGRHLDQDQLASSLRSILS 385
>gi|296114843|ref|ZP_06833491.1| cobalamin synthesis protein P47K [Gluconacetobacter hansenii ATCC
23769]
gi|295978549|gb|EFG85279.1| cobalamin synthesis protein P47K [Gluconacetobacter hansenii ATCC
23769]
Length = 330
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/283 (42%), Positives = 165/283 (58%), Gaps = 24/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K++ G+FD I++ETTGLA PAPV +TF DE V +
Sbjct: 71 MNNGCICCTVRGDLIRILGNLMKRR-GRFDGIIVETTGLADPAPVAQTFFVDEDVRGKTR 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+ + +Q L + EAV Q+A+AD IILNK DLV E L S+ RI+
Sbjct: 130 LDAVVTVVDAYNVLQTLEDS------TEAVNQIAFADVIILNKTDLVDEVALASIESRIR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN +A + A+ G V + VL GG+DL+R H
Sbjct: 184 AINGVARLHRAQRGDVALSDVLDQGGFDLQR-----------------ALQQAPHFLEET 226
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
H H+ V+S++ V E LD + W+ L++E+G D+ R KGIL+ G Q++ FQ V
Sbjct: 227 EHHHEEDVTSMSFVVEEPLDAAKFQAWIGALLQEQGADILRAKGILNYRGEPQRFAFQAV 286
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG W DE ++LVFIGRNL+ LR+GF+ C A
Sbjct: 287 HMMADGGFIGPWKTDETPQSRLVFIGRNLNRPQLRRGFESCRA 329
>gi|241666881|ref|YP_002984965.1| cobalamin synthesis protein P47K [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|424878521|ref|ZP_18302161.1| putative GTPase, G3E family [Rhizobium leguminosarum bv. trifolii
WU95]
gi|240862338|gb|ACS60003.1| cobalamin synthesis protein P47K [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|392521013|gb|EIW45742.1| putative GTPase, G3E family [Rhizobium leguminosarum bv. trifolii
WU95]
Length = 324
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/282 (38%), Positives = 166/282 (58%), Gaps = 25/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVR DL+ + L + + Q D +IET+GLA PAPVI++F D+++S ++
Sbjct: 60 LNNGCICCTVRDDLIAAIRALLQSGR-QIDRFIIETSGLADPAPVIQSFILDDVLSARLE 118
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD++H L + EAVEQ+++AD ++LNK+DLV E L + ++
Sbjct: 119 LDAIVTVVDARHIEGQLAQ-------EEAVEQISFADVLLLNKVDLVDEDHLLQVERDLR 171
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
N +A + K V + V+G+G +DL+ + + +D HE
Sbjct: 172 RRNPLARIIPTKDCGVAFEDVVGIGAFDLKNV---LEIDPQILEEQEHE----------- 217
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD + V LD ++ WL RL+++ G DL+RMKG+LS +G ++YV G+
Sbjct: 218 ---HDQTIGCVAFREPEPLDPVALNSWLTRLVQDIGADLFRMKGVLSFAGEARRYVLHGI 274
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H TL+G PGK W P E R + +VFIGRNLDE LR GF+ C+
Sbjct: 275 HMTLEGRPGKVWQPSEIRSSDIVFIGRNLDEEMLRAGFERCI 316
>gi|393765498|ref|ZP_10354060.1| cobalamin synthesis protein P47K [Methylobacterium sp. GXF4]
gi|392729080|gb|EIZ86383.1| cobalamin synthesis protein P47K [Methylobacterium sp. GXF4]
Length = 333
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 170/281 (60%), Gaps = 23/281 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ G+FD I++ETTGLA PAPV +TF D+ V +
Sbjct: 74 MNNGCVCCTVRGDLIRIMDGLVKRR-GKFDAIIVETTGLADPAPVAQTFFVDQDVGDAAR 132
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLV+ +L + I+
Sbjct: 133 LDAVVTVADAKWLSDRLKDAP------EAKNQIAFADVILLNKSDLVSPEDLDRVEAEIR 186
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN +A + + +V ++ VL +DL+RI EV D EGHHH
Sbjct: 187 GINPLAKLHRTQNCAVPLEAVLERNAFDLDRI-LEVEPDF-------------LEEGHHH 232
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+H DS + SV+ +G +D ++ W+ L + +G D+ R KGI++ +++VFQGV
Sbjct: 233 HH--DSEIQSVSARIDGEVDPEKFMPWISNLTQVQGPDILRCKGIVAFPNEPKRFVFQGV 290
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
H LDG W PDE R++++VFIGRNLD A+R+GF+ C
Sbjct: 291 HMILDGDVQGDWRPDEPRVSRVVFIGRNLDPVAIREGFESC 331
>gi|424922697|ref|ZP_18346058.1| GTPase [Pseudomonas fluorescens R124]
gi|404303857|gb|EJZ57819.1| GTPase [Pseudomonas fluorescens R124]
Length = 346
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/283 (39%), Positives = 179/283 (63%), Gaps = 12/283 (4%)
Query: 4 NGCLCCT--VRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
NGC+CCT VR DLV+++ +L + + DHI+IET+GLA P PV ++F ++ +++ V+
Sbjct: 73 NGCVCCTAEVREDLVRIVRELVARPV-RLDHILIETSGLADPYPVAQSFFINDPIAEEVE 131
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD+KH QHL +++ V N+AV+Q+ ADRI++NK+DLV+ E+ L +I+
Sbjct: 132 LDAIVTMVDAKHIAQHLEDLQLDGVDNQAVDQIVCADRIVINKVDLVSSDEVEILRGKIR 191
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA A + + + +D+ +LG+G ++ + E+ + H HH
Sbjct: 192 GLNATADLVTSTHAQIDLTRILGIGAFECTQKLMEIGAEPEHHDHEHHHE--------QA 243
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+H HD +VSSV I +G +DL W+ L + ++LYRMKG+L+V+ +Q+YV QGV
Sbjct: 244 DHEHDPSVSSVGIAVDGAVDLMAFHRWISELRSSQADNLYRMKGVLAVANEDQRYVLQGV 303
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
HS ++ AWG E R +K+VFIGR+LD AL +GF CLA
Sbjct: 304 HSLVEFRASTAWGT-EPRSSKIVFIGRDLDRAALNQGFAACLA 345
>gi|398352263|ref|YP_006397727.1| GTP-binding protein YjiA [Sinorhizobium fredii USDA 257]
gi|390127589|gb|AFL50970.1| putative GTP-binding protein YjiA [Sinorhizobium fredii USDA 257]
Length = 329
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/283 (39%), Positives = 175/283 (61%), Gaps = 23/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++++ +FD I+IETTGLA PAPV +TF DE V +
Sbjct: 64 MNNGCICCTVRGDLIRIIEALMRRRE-RFDGILIETTGLADPAPVAQTFFVDEDVRSKTR 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
L +IT+VD++H + ++ +EA EQ+A+AD IILNKIDLVTE + S+ ERI+
Sbjct: 123 LVSIITVVDARHLLGEIDRA------HEAQEQLAFADTIILNKIDLVTEEAITSVEERIR 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + ++ ++D+ +L +DL+RI EV D H
Sbjct: 177 CINPTAGILRSERCNLDIASLLDRKAFDLDRI-LEVEPDFLDV---------------EH 220
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+H HD V+S ++V +D ++ +WL++ ++ G D+ RMKGI+S +G + +YV QGV
Sbjct: 221 DHEHDDHVTSFSLVEREPMDPNKFFNWLQKTVQAFGMDMLRMKGIISFAGDDHRYVVQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H ++G + W E+R+ +LVFIGRNL ++ + GF C A
Sbjct: 281 HMLMEGDHQRPWKFGEERVTRLVFIGRNLPKSVISDGFSSCRA 323
>gi|443474505|ref|ZP_21064480.1| cobalamin synthesis protein P47K [Pseudanabaena biceps PCC 7429]
gi|443020763|gb|ELS34684.1| cobalamin synthesis protein P47K [Pseudanabaena biceps PCC 7429]
Length = 358
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/308 (39%), Positives = 185/308 (60%), Gaps = 37/308 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L +++ +FDH++IETTGLA P PVI+TF DE + + V
Sbjct: 63 MNNGCICCTVRGDLIRIIGNLMRRRH-KFDHLLIETTGLADPGPVIQTFFMDEDIYRQVD 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH QH + E +EQ+ +AD I+LNK DLVT+ EL L +IK
Sbjct: 122 LDAVVTVVDAKHVQQHWGD-------REVLEQIGFADVILLNKTDLVTKAELDELEAKIK 174
Query: 122 HINAMAPVKLAKYGS----VDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESA----- 172
H+N +A V + ++ V+ VGG+DL RI + N T E++
Sbjct: 175 HLNVLAKVSRVQLNQDKVEDSVNKVINVGGFDLTRILEK----NPEFVTPKGEASHDHHD 230
Query: 173 ----------------HGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK 216
H H+ HH+H+HD V SV+IV G+++ + +W+ L++ +
Sbjct: 231 HEHGDHDHHDGHDHDHHDGHDHDHHHHIHDEEVGSVSIVETGSVNPYKFQEWINELLKTQ 290
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
G+D++R KGI+++SG+E++ VFQGVH D + W DE R N+LVFIGR+L+ LR
Sbjct: 291 GQDIFRSKGIINLSGAEERLVFQGVHMQFDATRDRPWKKDELRKNQLVFIGRHLEADKLR 350
Query: 277 KGFKGCLA 284
F+ CL
Sbjct: 351 NSFRLCLV 358
>gi|399912393|ref|ZP_10780707.1| putative cobalamin synthesis protein [Halomonas sp. KM-1]
Length = 328
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 164/282 (58%), Gaps = 23/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K+ +FD I+IETTGLA PAPV +TF D+ V +
Sbjct: 60 MNNGCICCTVRGDLIRIISGLMKRID-RFDAIIIETTGLADPAPVAQTFFVDDDVRSKTE 118
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH L++ EA EQVA+AD ++LNKIDL+ + E +L RI+
Sbjct: 119 LDAVVTVVDAKHLPARLDDSP------EAAEQVAFADIVVLNKIDLIDDGERQALERRIR 172
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + A + + ++ V+G+G +DLERI S H
Sbjct: 173 AINPYTRIVAANHCDLPLEQVIGLGAFDLERI----------------ISLEPEFLSEEH 216
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
H HD V+S+++ + L + D W+ ++ G ++ R KGIL + G E++YVFQ V
Sbjct: 217 AHEHDEQVTSISLTATRPLLPERFDTWISEVLRTDGVNILRCKGILDLLGQERRYVFQSV 276
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H +G K W DE R ++LVFIGR+LD L+ GF C+
Sbjct: 277 HMLANGTSTKPWQSDEARHSRLVFIGRDLDAKKLQAGFDACV 318
>gi|398865739|ref|ZP_10621251.1| putative GTPase, G3E family [Pseudomonas sp. GM78]
gi|398242482|gb|EJN28094.1| putative GTPase, G3E family [Pseudomonas sp. GM78]
Length = 348
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 116/283 (40%), Positives = 188/283 (66%), Gaps = 10/283 (3%)
Query: 4 NGCLCCT--VRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
NGC+CCT VR DLV+++ +L + + DHI+IET+GLA P PV ++F ++ ++ V+
Sbjct: 73 NGCVCCTAEVREDLVRIVRELVARPV-RLDHILIETSGLADPYPVAQSFFINDPIADEVE 131
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD++H QHL++++ V N+AV+Q+ ADRI++NK+DLV++ E+ SL+++I+
Sbjct: 132 LDAIVTMVDARHIAQHLHDLQLDGVDNQAVDQIVCADRIVINKVDLVSDAEVASLSDKIR 191
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA A + + Y +D+ +LG+G ++ + E+ A H H + HHE
Sbjct: 192 GLNATADLVTSSYAEIDLSKILGIGAFESTQKLMEIG------AEHDHHADDHHHEHDEP 245
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+H HD +V+SV I +G ++L + W+ RL E+ ++LYRMKG+L+V+ +Q+YV QGV
Sbjct: 246 DHEHDPSVTSVGIAVDGAVNLGDFHRWITRLRTEQADNLYRMKGVLAVADQDQRYVLQGV 305
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
HS ++ WG E R +K+VFIGR+LD AL +GF CLA
Sbjct: 306 HSLVEFRASTPWGA-EPRTSKIVFIGRDLDRAALNQGFAACLA 347
>gi|167523645|ref|XP_001746159.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775430|gb|EDQ89054.1| predicted protein [Monosiga brevicollis MX1]
Length = 388
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 165/290 (56%), Gaps = 28/290 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ VK + L +K+ G+FD++V+ETTGLA P P+ F D+ + VK
Sbjct: 115 LRNGCLCCSVKDVGVKAIENLMEKR-GRFDYVVLETTGLADPGPIASMFWLDDALCSQVK 173
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDGV+T++D+K+ +Q L E +P V+NEAV QVA ADRI+LNKIDLV+E E L + ++
Sbjct: 174 LDGVVTVMDAKYGLQQLKEERPAHVMNEAVRQVALADRILLNKIDLVSEAERDELRQAVQ 233
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN +A + Y V MDFVLG+ +D + E+ +GH H
Sbjct: 234 GINGLAQIVETSYAKVPMDFVLGIQAFDQTK----------------AEAVLAAQQGHTH 277
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEE--------KGEDLYRMKGILSVSGSE 233
+ D+ V +VT G +D V+ WLE+L+ E G ++ R KG+L++ G +
Sbjct: 278 D---DATVRTVTFEQAGPVDERAVESWLEQLLWEGMLDGQAVAGLEVLRAKGVLAIHGQD 334
Query: 234 QQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
++ +FQ V D W P E RI ++VFIGRNL + + CL
Sbjct: 335 KRVIFQAVRELYDKTTTSEWEPTEPRITRMVFIGRNLPDGMAESFARNCL 384
>gi|329847650|ref|ZP_08262678.1| cobalamin synthesis protein cobW C-terminal domain protein
[Asticcacaulis biprosthecum C19]
gi|328842713|gb|EGF92282.1| cobalamin synthesis protein cobW C-terminal domain protein
[Asticcacaulis biprosthecum C19]
Length = 389
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/328 (37%), Positives = 179/328 (54%), Gaps = 53/328 (16%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K+K G+FD I++ETTGLA P PV +TF DE +
Sbjct: 67 MNNGCVCCTVRGDLIRILSGLMKRK-GKFDAIIVETTGLADPGPVAQTFFVDEEIKAKTY 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V TLVD++H Q L + + EA EQVA+AD IILNK DLV+ +L + R+K
Sbjct: 126 LDSVTTLVDARHFDQALKDGR------EAKEQVAFADHIILNKTDLVSPEKLDEIEGRLK 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERID--------------------------- 154
+N +A ++ A V + +L +DL +++
Sbjct: 180 GLNPLATIQRAHRSDVPIRTLLNQHRFDLSKMEQVEAHDHHHDHDHGHHDHHGHEHHHHD 239
Query: 155 SEVHVDNSHC-----------------ATHHHESAHGHHE--GHHHNHMHDSAVSSVTIV 195
+ H + H H E+ H H E H N +HD + SV++
Sbjct: 240 NPAHGEPGHVHDEHCGHDHHHHDHHNHGPAHGEAGHVHDEHCSHQINPIHDEEIKSVSLS 299
Query: 196 SEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGP 255
SE +D + WL++L+ E+G+D+ R KGIL+V+G E++ VFQ VH L+G + W
Sbjct: 300 SEAPVDGVKFTKWLDKLLAEQGQDILRAKGILNVAGEEKRLVFQAVHMILEGELQQPWRE 359
Query: 256 DEKRINKLVFIGRNLDETALRKGFKGCL 283
EKR+++ VFIGR LD+ AL+ GF C+
Sbjct: 360 GEKRLSRAVFIGRRLDQAALKAGFDACV 387
>gi|444379595|ref|ZP_21178772.1| Putative metal chaperone [Enterovibrio sp. AK16]
gi|443676324|gb|ELT83028.1| Putative metal chaperone [Enterovibrio sp. AK16]
Length = 323
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 112/281 (39%), Positives = 169/281 (60%), Gaps = 23/281 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K+ GQFD I++ETTGLA PAPVI+TF D+ V++ +
Sbjct: 63 MNNGCICCTVRGDLIRILSGLIKRA-GQFDAIIVETTGLADPAPVIQTFFVDQDVAERTR 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+ D+ H L E +EA EQ+A+AD I+LNK DL ++ + RI+
Sbjct: 122 LDAIVTVADAVHLNSQLAEH------HEADEQIAFADVILLNKTDLAEAGDVEKVEARIR 175
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
N A + ++ ++G+ + LER+ E D ES H H
Sbjct: 176 KSNPSARIIRTARCDAPLNEIIGLEAFSLERV-MEFEPD-------FLESGHAHE----- 222
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD+ V+S++ ++ LDL++ + W RL++ G+D+ R KGIL +G EQ+YVFQGV
Sbjct: 223 ---HDNDVTSLSFTTDTPLDLEKFERWFGRLLQLHGQDILRSKGILDFAGQEQRYVFQGV 279
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
H +DG AW + R +++VFIGRNL+ L++GF+ C
Sbjct: 280 HMLMDGSMMGAWPEGKPRSSRMVFIGRNLNSMELKEGFEAC 320
>gi|418531115|ref|ZP_13097034.1| G3E family GTPase [Comamonas testosteroni ATCC 11996]
gi|371451824|gb|EHN64857.1| G3E family GTPase [Comamonas testosteroni ATCC 11996]
Length = 370
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 172/295 (58%), Gaps = 19/295 (6%)
Query: 2 VNNGCLCCTV--RGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
V NGC+CC V R DLV++L +L ++K QFDHI++ET+GLA P+PV TF D V++
Sbjct: 65 VANGCICCVVDVRNDLVQILQKLLERKD-QFDHILVETSGLADPSPVAATFFMDNDVAKK 123
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
V LDG++TLVD+ H HL++ N+AV Q+ ADRI+LNK DLV E+EL L R
Sbjct: 124 VMLDGIVTLVDAVHVQPHLDDPALAEYDNQAVTQIVVADRILLNKSDLVGESELKELERR 183
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYD---LERIDSE------------VHVDNSHC 164
I+ +N++APV VD+ +LG+ Y+ L D + H+ + HC
Sbjct: 184 IRTLNSIAPVMRTVQAQVDLSQILGLQTYESDALSMTDPDFLHKPAIGGPIGAHLCDEHC 243
Query: 165 ATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMK 224
H+ + H H HD +V+SV+ + D+D + L L+ E G+D+YR+K
Sbjct: 244 THQEHDHLPAISQSADHAHTHDPSVNSVSFTFDRPFDIDALMPTLNALLSEHGDDIYRVK 303
Query: 225 GILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
GIL V G ++++V QGVH L+ P W DE +KLVFIGR+L+ + LR
Sbjct: 304 GILHVQGDDRRHVLQGVHRLLELKPALPWW-DEAPGSKLVFIGRHLNASQLRSAL 357
>gi|49475993|ref|YP_034034.1| hypothetical protein BH12980 [Bartonella henselae str. Houston-1]
gi|49238801|emb|CAF28072.1| hypothetical protein BH12980 [Bartonella henselae str. Houston-1]
Length = 342
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 114/287 (39%), Positives = 168/287 (58%), Gaps = 18/287 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L ++ +FD I+IETTGLA P PV +TF D+ V+
Sbjct: 67 MNNGCVCCTVRGDLIRILESLMRRSH-RFDAIIIETTGLADPVPVAQTFFMDDTVNTKTA 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI +VD+KH L + + EA EQ+A+AD I+LNKIDLV+ E I
Sbjct: 126 LDSVIAVVDAKHLSLQLKKSR------EAEEQIAFADIILLNKIDLVSVKERAQAESLIL 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAH--GHHEGH 179
IN A + + ++ +D +L G +DL+R+ ++N H H H G H
Sbjct: 180 AINPRAVIYATERTNIPLDKLLDRGSFDLQRV-----LENDHHFLDHQHFDHVCGPDCNH 234
Query: 180 HHNHMHDSAVSSVTIVS----EGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQ 235
H H H S + +TI S G L ++ W++++ ++KG D+ R+KGI++ G + +
Sbjct: 235 DHTHHHTSVLHDITITSVSLKTGALQPEKFFPWIQQITQQKGPDILRLKGIIAFQGDDDR 294
Query: 236 YVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
YV QG+H L+G + W DEKR ++LVFIGR LD L+ GF+ C
Sbjct: 295 YVIQGIHMILEGQHQRPWREDEKRESRLVFIGRTLDAKQLKTGFENC 341
>gi|398966102|ref|ZP_10681358.1| putative GTPase, G3E family [Pseudomonas sp. GM30]
gi|398146499|gb|EJM35241.1| putative GTPase, G3E family [Pseudomonas sp. GM30]
Length = 346
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 112/283 (39%), Positives = 180/283 (63%), Gaps = 12/283 (4%)
Query: 4 NGCLCCT--VRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
NGC+CCT VR DLV+++ +L + + DHI+IET+GLA P PV ++F ++ +++ V+
Sbjct: 73 NGCVCCTAEVREDLVRIVRELVARPV-RLDHILIETSGLADPYPVAQSFFINDPIAEEVE 131
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD+KH QHL +++ V N+AV+Q+ ADRI++NK+DLV+ E+ L +I+
Sbjct: 132 LDAIVTMVDAKHIAQHLEDLQLDGVDNQAVDQIVCADRIVINKVDLVSSDEVEILRGKIR 191
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA A + + + +D+ +LG+G ++ + E+ + H HH +
Sbjct: 192 GLNATADLVTSTHAQIDLTKILGIGAFECTQKLMEIGAEPEHHEHDHHHES--------A 243
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+H HD +VSSV I +G ++L W+ L + ++LYRMKG+L+V+ +Q+YV QGV
Sbjct: 244 DHEHDPSVSSVGIAVDGAVNLMAFHRWISELRSSQADNLYRMKGVLAVANEDQRYVLQGV 303
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
HS ++ AWG E R +K+VFIGR+LD AL +GF CLA
Sbjct: 304 HSLVEFRASTAWGT-EPRSSKIVFIGRDLDRAALNQGFAACLA 345
>gi|319899181|ref|YP_004159274.1| cobalamin synthesis protein [Bartonella clarridgeiae 73]
gi|319403145|emb|CBI76703.1| putative cobalamin synthesis protein [Bartonella clarridgeiae 73]
Length = 349
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 111/286 (38%), Positives = 175/286 (61%), Gaps = 12/286 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L ++ +FD I+IETTG+A P PV +TF D+ V +
Sbjct: 72 MNNGCVCCTVRGDLIRVLESLMQRS-SRFDAIIIETTGIADPTPVAQTFFMDDTVREKTA 130
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VITLVD+KH L E EA +Q+A+AD I+LNKIDLV+ E + I
Sbjct: 131 LDSVITLVDAKHLPLQLKESL------EAEDQIAFADIILLNKIDLVSVEERAHIESLIY 184
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN A + ++ ++ ++ +L G +DL+R ++++ H + H H H
Sbjct: 185 AINPNAIIYATEHANIPLNKILNRGSFDLQRALENDPHFLDHENPDHVCSPQCNHEHRHK 244
Query: 181 HNH---MHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYV 237
HNH MHD ++SV++ + G L ++ WL+++ +E+G ++ R+KGI++ G + +YV
Sbjct: 245 HNHESLMHDVTITSVSLKT-GALQQEKFFSWLQQVTQEQGPNILRLKGIIAFHGDDNRYV 303
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QG+H L+G + W +EKR ++LVFIGR+LD L+ F+ C+
Sbjct: 304 IQGIHMLLEGQHQRPWRQNEKRESRLVFIGRSLDAEKLKTDFENCI 349
>gi|397610747|gb|EJK60998.1| hypothetical protein THAOC_18578 [Thalassiosira oceanica]
Length = 368
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 170/285 (59%), Gaps = 19/285 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
++NGC+CC+VRGDLV+ L LAK+++ FD +++ETTGLA PAP++ T T+ +S +
Sbjct: 92 MDNGCICCSVRGDLVRTLGSLAKRRK-DFDAVLLETTGLADPAPIVYTIQTNPKMSDNYR 150
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
+D +++L D KH HL+E KP VNEA++Q+A++D+I+LNK+DLV+ E +L RIK
Sbjct: 151 IDSIVSLADCKHLASHLDEKKPDNSVNEALQQIAFSDKILLNKVDLVSTEEKDALKARIK 210
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+IN A + + ++ +L V + +E I + D G +
Sbjct: 211 NINNFATIIETERSRAPLEKILNVSAFSMESI---LKFD------------PGFFDDEDD 255
Query: 182 NHMHD-SAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGS-EQQYVFQ 239
+H+ VSSV + EG L + ++ L+ E+ DLYR KG+LS G ++VFQ
Sbjct: 256 KKIHNLELVSSVGVKFEGNLHAQYFNMFMMDLLRERASDLYRTKGVLSFHGQGATKFVFQ 315
Query: 240 GVHSTLDGCPGK-AWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
GVH ++ P K WG DEKRINK VFIG+NLD L +G CL
Sbjct: 316 GVHDQINFGPAKNPWGEDEKRINKFVFIGKNLDRKELTEGLMECL 360
>gi|397587522|gb|EJK53942.1| hypothetical protein THAOC_26523 [Thalassiosira oceanica]
Length = 425
Score = 209 bits (533), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 172/305 (56%), Gaps = 40/305 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDE------- 54
V NGC+CCTVRGDLV+ L +L K+ +FD ++IETTGLA PAPV++TF DE
Sbjct: 76 VMNGCICCTVRGDLVEALKRLYKRVD-KFDGVIIETTGLADPAPVVQTFFVDESEFERFA 134
Query: 55 --------------LVSQYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRI 100
VS+ LD VIT+VD+K + L +VKP V NEAVEQVA+ADR+
Sbjct: 135 FNILKVLIFVKTTAAVSEQYSLDCVITVVDAKVILDRLADVKPEGVENEAVEQVAFADRV 194
Query: 101 ILNKIDLVTETELGSLTERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVD 160
+LNK DLV E L + ++K +N A + Y V +L + +DL+R+
Sbjct: 195 LLNKTDLVNEETLVKIEGKVKSLNPAATIIRCSYSKVSPKDLLNIQAFDLKRV------- 247
Query: 161 NSHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDL 220
E +G H HDS VSSV+ +G ++ + W+ RLI+E G +L
Sbjct: 248 ------LEFEPDFLEDDGDHQ---HDSTVSSVSCKIKGNVNQMMLSRWIGRLIQEDGANL 298
Query: 221 YRMKGILSVSGSEQQYVFQGVHSTLDGCPGK-AWG-PDEKRINKLVFIGRNLDETALRKG 278
YR KGIL++ G +++++FQGV +G + WG P+ +R N VFIG+NLD L+
Sbjct: 299 YRYKGILAIKGVDEKFIFQGVGMIFNGNISEMKWGVPESERENVFVFIGKNLDHEWLKSC 358
Query: 279 FKGCL 283
FK CL
Sbjct: 359 FKACL 363
>gi|217979562|ref|YP_002363709.1| cobalamin synthesis protein P47K [Methylocella silvestris BL2]
gi|217504938|gb|ACK52347.1| cobalamin synthesis protein P47K [Methylocella silvestris BL2]
Length = 322
Score = 209 bits (533), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 110/283 (38%), Positives = 167/283 (59%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV + L + + D ++IET+GLA PAPVI++F D+L+S +V+
Sbjct: 60 LNNGCICCTVRGDLVVAISDLIRSDR-PIDRLIIETSGLADPAPVIQSFILDDLMSAHVQ 118
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD +H + L +EA EQ+A+AD ++LNKIDL E + +
Sbjct: 119 LDAIVTVVDVRHIARQLQH-------DEAREQIAFADILLLNKIDLEDEAASEAAECAAR 171
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+N +A + +V+ VL +G +DL+ N + H H
Sbjct: 172 RLNPLARFLRTRECAVEARQVLDLGAFDLK---------NLLALDPDLLADHAHE----- 217
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
H S + V + E LD D + WL RL++++G D+ RMKG+L+ SG +++YVF GV
Sbjct: 218 ---HSSEIGCVALTIEEGLDPDAFNRWLNRLLQDRGADILRMKGVLNFSGDKRRYVFHGV 274
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H TLDG PG+ W +E+R++++VFIGR LD AL +G + C A
Sbjct: 275 HMTLDGRPGRPWLNEERRVSQIVFIGRQLDREALLQGLEACRA 317
>gi|296447377|ref|ZP_06889303.1| cobalamin synthesis protein P47K [Methylosinus trichosporium OB3b]
gi|296255080|gb|EFH02181.1| cobalamin synthesis protein P47K [Methylosinus trichosporium OB3b]
Length = 366
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 168/304 (55%), Gaps = 33/304 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ G+FD I++ETTG+A PAPV +TF D V + +
Sbjct: 61 MNNGCICCTVRGDLIRIIEGLMKRR-GKFDAIIVETTGVADPAPVAQTFFVDADVKEAAR 119
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+TL D+K +Q L + EA Q+A+AD I+LNK DLVT EL + RI+
Sbjct: 120 LDAVVTLADAKFLLQRLADAP------EAKNQIAFADVIVLNKTDLVTPDELAEVEARIR 173
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-DSEVHVDNSHCAT-----------HHH 169
IN A + +V +D VLG +DLERI D E + H H
Sbjct: 174 AINPYATLHRTVKAAVPLDAVLGRNAFDLERILDIEPRFLEAEDHDHHDHEHHGRGDHEH 233
Query: 170 ESAHGHH--------------EGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEE 215
+ G E H H HD + SV+I EG +D + WL ++
Sbjct: 234 DHDCGPDCGHDHHDHDHAHHGESHGLKHYHDEDMHSVSIRHEGEVDPNLFVPWLNDFVQA 293
Query: 216 KGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETAL 275
+G D+ R KGI++ +++VFQGVH LDG + W DE R+++LVFIGR L+E A+
Sbjct: 294 EGADILRCKGIVAFENEPRRFVFQGVHMILDGDLQREWREDEPRVSRLVFIGRKLNEEAI 353
Query: 276 RKGF 279
R F
Sbjct: 354 RDAF 357
>gi|56962891|ref|YP_174618.1| hypothetical protein ABC1119 [Bacillus clausii KSM-K16]
gi|56909130|dbj|BAD63657.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 326
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/283 (39%), Positives = 167/283 (59%), Gaps = 24/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
VN+GC+CC VR DL+ L L ++++ D IVIETTG+A PAPVI+TF D+ + +
Sbjct: 63 VNSGCICCNVRADLINRLRNLNEREES-LDRIVIETTGMANPAPVIQTFLMDKETAHSFE 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
+D VIT+VD+KH QHL E +P +Q+A+AD +++NK+DL+T+ E L +R+
Sbjct: 122 IDHVITMVDAKHIWQHLAEEEPG-------QQIAFADVLLINKVDLITDDEKNKLGQRLT 174
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
H+N A + VD V+G +DL+ + V +D + HH HHH
Sbjct: 175 HMNPHAKQIYTTFAQVDSRDVVGKKSFDLKNV---VKIDPTLLTEMHH---------HHH 222
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
N + V+S + LDL++V++W L++ KGE L+R KG+L + E++ VFQGV
Sbjct: 223 NEL----VTSFVFQEDHPLDLEKVNNWFAYLVQCKGETLFRYKGVLYIKQLEKRVVFQGV 278
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H G W +EKR +++VFIG++LD+ L KGF C A
Sbjct: 279 HMLFASTEGAPWAKEEKRQSEIVFIGKHLDKQELAKGFHYCRA 321
>gi|357404189|ref|YP_004916113.1| cobalamin synthesis protein [Methylomicrobium alcaliphilum 20Z]
gi|351716854|emb|CCE22519.1| Putative cobalamin synthesis protein [Methylomicrobium alcaliphilum
20Z]
Length = 332
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/284 (39%), Positives = 167/284 (58%), Gaps = 26/284 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCTVRGDLV++L +LA K+ +FD ++IETTGLA PAPV +TF D ++
Sbjct: 66 MNNGCICCTVRGDLVRILGELADKRTAGGAEFDRVIIETTGLADPAPVAQTFFADRNIAD 125
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+ LD ++T+VD+KHA L++ +EA EQV +ADR++L+K DLV+ E+ +L
Sbjct: 126 FYTLDAIVTVVDAKHASNQLDDH------HEAQEQVGFADRLLLSKTDLVSAEEVENLEN 179
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ +N+ AP++ +GS D+D VL + G++L+ I EV D TH H
Sbjct: 180 RLRAMNSRAPIRHVHFGSCDIDEVLDIRGFNLQAI-LEVEPDFLEDVTHEH--------- 229
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
D +SS S+ D + + + ++ GEDL R KGIL + G E + ++
Sbjct: 230 -------DDDISSFVYRSDRAFDAARIMAFFDVMVRVYGEDLLRYKGILQIEGQENRIIY 282
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
QGVH ++ GK W DEKR + +VFIGR+L + A C
Sbjct: 283 QGVHMMMNADFGKPWSADEKRESVMVFIGRDLPKQAFIDAMDEC 326
>gi|192289357|ref|YP_001989962.1| cobalamin synthesis protein P47K [Rhodopseudomonas palustris TIE-1]
gi|192283106|gb|ACE99486.1| cobalamin synthesis protein P47K [Rhodopseudomonas palustris TIE-1]
Length = 349
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 175/291 (60%), Gaps = 15/291 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV++L L K+K G+FD I++ETTGLA PAPV +TF DE V +
Sbjct: 65 MNNGCVCCTVRGDLVRILAGLMKRK-GKFDAIIVETTGLADPAPVAQTFFVDEDVQNAAR 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K + L + EA Q+A+AD I+LNK DLV+ EL + RI+
Sbjct: 124 LDAVVTVADAKWLSERLKDAP------EAKNQIAFADVIVLNKTDLVSPAELAEVEARIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI--------DSEVHVDNSHCATHHHESAH 173
IN A + + V + VL G +DL+RI +++ H + HH H
Sbjct: 178 AINPYAKLHRTERCQVALADVLERGAFDLDRILEIEPAFLEADDHDHHHDHDHGHHHHGH 237
Query: 174 GHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSE 233
HH H H HD + S+++ S+ LD + WL++L++ +G + R KGIL+ +G +
Sbjct: 238 DHHHDHGLKHYHDEDMQSLSLKSDKPLDPAKFMPWLQQLVQTEGGKILRSKGILAFTGDD 297
Query: 234 QQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+YVFQGVH L+G +AW E R +++VFIGR+L E A+R GF C+A
Sbjct: 298 DRYVFQGVHMMLEGDHQRAWKEGEPRESRVVFIGRDLPEQAIRDGFAKCIA 348
>gi|456357964|dbj|BAM92409.1| putative cobalamin synthesis protein/P47K family protein [Agromonas
oligotrophica S58]
Length = 347
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 172/290 (59%), Gaps = 15/290 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L ++K G+FD I++ETTGLA PAPV +TF DE V + +
Sbjct: 63 MNNGCICCTVRGDLVRIISGLMRRK-GKFDAIIVETTGLADPAPVAQTFFVDEDVQKNAR 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLVT+ EL + RI+
Sbjct: 122 LDAVVTVADAKWLSDRLKDAP------EAKNQIAFADVIVLNKTDLVTKPELAEVEARIR 175
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI--------DSEVHVDNSHCATHHHESAH 173
IN A + + V + VL G +DL+RI ++ D+ H H
Sbjct: 176 AINPYARLHRTERCQVAISDVLERGAFDLDRILEIEPEFLNAGDDHDHHHHDHDHDHGHD 235
Query: 174 GHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSE 233
HH H H HD + S+++ S+ LD + WL+ L++ +G + R KGILS +
Sbjct: 236 HHHHDHGLKHYHDEDMQSLSLRSDKPLDPSKFMPWLQNLVQTEGGKILRSKGILSFQDDD 295
Query: 234 QQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+YVFQGVH L+G + W PDE R +++VFIGR L E A+R+GF+ C+
Sbjct: 296 DRYVFQGVHMMLEGDHQRKWKPDEARQSRVVFIGRELPEDAIREGFERCI 345
>gi|39933938|ref|NP_946214.1| cobalamin synthesis protein P47K [Rhodopseudomonas palustris
CGA009]
gi|39647785|emb|CAE26305.1| possible CobW protein involved in cobalamin synthesis
[Rhodopseudomonas palustris CGA009]
Length = 362
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 175/291 (60%), Gaps = 15/291 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV++L L K+K G+FD I++ETTGLA PAPV +TF DE V +
Sbjct: 78 MNNGCVCCTVRGDLVRILAGLMKRK-GKFDAIIVETTGLADPAPVAQTFFVDEDVQNAAR 136
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K + L + EA Q+A+AD I+LNK DLV+ EL + RI+
Sbjct: 137 LDAVVTVADAKWLSERLKDAP------EAKNQIAFADVIVLNKTDLVSPAELAEVEARIR 190
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI--------DSEVHVDNSHCATHHHESAH 173
IN A + + V + VL G +DL+RI +++ H + HH H
Sbjct: 191 AINPYAKLHRTERCQVALADVLERGAFDLDRILEIEPAFLEADDHDHHHDHDHGHHHHGH 250
Query: 174 GHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSE 233
HH H H HD + S+++ S+ LD + WL++L++ +G + R KGIL+ +G +
Sbjct: 251 DHHHDHGLKHYHDEDMQSLSLKSDKPLDPAKFMPWLQQLVQTEGGKILRSKGILAFTGDD 310
Query: 234 QQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+YVFQGVH L+G +AW E R +++VFIGR+L E A+R GF C+A
Sbjct: 311 DRYVFQGVHMMLEGDHQRAWKEGEPRESRVVFIGRDLPEQAIRDGFAKCIA 361
>gi|91975326|ref|YP_567985.1| cobalamin synthesis protein, P47K [Rhodopseudomonas palustris
BisB5]
gi|91681782|gb|ABE38084.1| cobalamin synthesis protein, P47K [Rhodopseudomonas palustris
BisB5]
Length = 353
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/297 (40%), Positives = 174/297 (58%), Gaps = 25/297 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV++L L K+K G+FD I++ETTGLA PAPV +TF DE V + +
Sbjct: 65 MNNGCVCCTVRGDLVRILGGLMKRK-GKFDAIIVETTGLADPAPVAQTFFVDEDVMAFSR 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLVT+ EL + RI+
Sbjct: 124 LDAVVTVADAKWLSDRLKDAP------EAKNQIAFADVIVLNKTDLVTKPELAEVEARIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + + V + VL G +DL+RI + ++ + T H H+ H
Sbjct: 178 AINPYARLHHTERCQVALADVLDRGAFDLDRI---LEIEPAFLETGDDHGHHHDHDHGHD 234
Query: 182 ---------------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGI 226
H HD + S+++ S+ +D + WL++L++ +G+ + R KGI
Sbjct: 235 HGHHHHHDHGDGHGLKHYHDEDMQSLSLKSDKPIDPAKFMPWLQQLVQTEGQKILRSKGI 294
Query: 227 LSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
LS +G +YVFQGVH L+G +AW DE R +++VFIGR L E A+R GF+ C+
Sbjct: 295 LSFAGDTDRYVFQGVHMMLEGDHQRAWKDDEPRQSRVVFIGRELPEQAIRDGFEKCI 351
>gi|451979844|ref|ZP_21928253.1| putative GTPase, CobW-like protein [Nitrospina gracilis 3/211]
gi|451762936|emb|CCQ89459.1| putative GTPase, CobW-like protein [Nitrospina gracilis 3/211]
Length = 334
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 113/284 (39%), Positives = 175/284 (61%), Gaps = 19/284 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
++NGC+CC+++GDL++ L +L + Q Q D+IVIE TGLA P P+ + F +E ++Q +K
Sbjct: 67 MSNGCVCCSIKGDLIETLNRLLAR-QKQIDYIVIEATGLASPGPIAQAFMVEEDIAQGLK 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDGV+TLVD KH L E ++ A EQ+A+++ I+LNK DLVTE L + + I
Sbjct: 126 LDGVVTLVDCKHIEMQLEE------LDVAWEQIAFSNVILLNKTDLVTEDALQRVRKCIT 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + + ++ V ++ VL +GG+DL+R++ + D+ H+ AH +GH+H
Sbjct: 180 GINPTATIHITRHAQVSLEQVLDIGGFDLDRLNFD---DDG------HDHAHADEDGHYH 230
Query: 182 N--HMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
+ HD A++SV I G +D + + WL+ L +G D++R KGIL+V S ++VFQ
Sbjct: 231 DAGPRHDDAITSVGITVPGCIDPNRFNIWLQMLYLSEGMDVFRAKGILNVEDSPNRHVFQ 290
Query: 240 GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
V+ D + WG DE R N L+FIGRNL+ L G + C+
Sbjct: 291 CVYMMFDTREDRPWG-DEPRQNTLLFIGRNLNRERLEAGVQSCI 333
>gi|46204015|ref|ZP_00050615.2| COG0523: Putative GTPases (G3E family) [Magnetospirillum
magnetotacticum MS-1]
Length = 328
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 168/284 (59%), Gaps = 25/284 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ G+FD I++ETTGLA PAPV +TF D+ V + +
Sbjct: 69 MNNGCVCCTVRGDLIRIMDGLVKRR-GKFDAIIVETTGLADPAPVAQTFFVDQDVGEAAR 127
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLV + +L + +I+
Sbjct: 128 LDAVVTVADAKWLSDRLADAP------EAKNQIAFADVILLNKADLVAKEDLDRVEGQIR 181
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-DSEVHVDNSHCATHHHESAHGHHEGHH 180
IN A V + ++ +D VL +DL RI D E EGHH
Sbjct: 182 GINPYAKVHRTERCNIALDAVLDRKAFDLSRILDLEPDF---------------LEEGHH 226
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
H+H D+ + SV+ +G +D ++ W+ L +G D+ R KGI++ ++VFQG
Sbjct: 227 HHH--DAQMQSVSAKIDGPVDPEKFMPWISNLTTVQGPDILRCKGIVAFPDEPNRFVFQG 284
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
VH LDG AWG DE R++++VFIGRNLD A+R+GF C A
Sbjct: 285 VHMILDGDLQGAWGVDETRVSRVVFIGRNLDPEAIREGFYACKA 328
>gi|83308640|emb|CAJ01548.1| cobalamine synthase protein W [uncultured bacterium]
Length = 331
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/283 (40%), Positives = 166/283 (58%), Gaps = 12/283 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K+K G+FD I++ETTGLA PAPV +TF D V +
Sbjct: 61 MNNGCICCTVRGDLIRIVEGLLKRK-GKFDAILVETTGLADPAPVAQTFFVDADVRDAAR 119
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K + L + EA Q+A+AD IILNK DLV E+ + RI+
Sbjct: 120 LDAVVTVADAKWLTERLKDAP------EAKNQIAFADVIILNKTDLVCADEVSEIEARIR 173
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + +V +D VLG +DL+RI +D + + HE H
Sbjct: 174 AINPYAKLHKTVNCAVPLDAVLGRNAFDLDRI-----LDLAPEFLDGEDDHEHEHEHHGL 228
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
H HD + SV++ EG +D ++ WL+ ++++G + R KGIL+ +++VFQGV
Sbjct: 229 KHYHDEDMQSVSLSIEGDIDPEKFMPWLQNYVQKEGASILRAKGILAFKNEPKRFVFQGV 288
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H LDG + W P EKR ++LVFIGRNL + +GF C A
Sbjct: 289 HMLLDGDLQREWKPQEKRQSRLVFIGRNLKRDEITRGFMSCAA 331
>gi|315497446|ref|YP_004086250.1| cobalamin synthesis protein p47k [Asticcacaulis excentricus CB 48]
gi|315415458|gb|ADU12099.1| cobalamin synthesis protein P47K [Asticcacaulis excentricus CB 48]
Length = 385
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 180/335 (53%), Gaps = 69/335 (20%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K+K G+FD I++ETTGLA P PV +TF DE V
Sbjct: 67 MNNGCVCCTVRGDLIRILSGLMKRK-GRFDAIIVETTGLADPGPVAQTFFVDEEVKARTY 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V LVD+KH L + VV E Q+A+AD +ILNK DL T EL + R++
Sbjct: 126 LDSVTALVDAKHFRSALEADR---VVKE---QIAFADHVILNKTDLATPEELNEVEARVR 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHE----------- 170
+N +A ++ A+ V++ +L +DL++++S +HHE
Sbjct: 180 GLNPLATIERAERSGVEIKGLLNQHRFDLDKMES---------VANHHEHGPDCGDHCDH 230
Query: 171 ---------------------SAHGHHEGH--------------------HHNHMHDSAV 189
AHG GH H N +HD+ +
Sbjct: 231 DHGHDHHHHGHDHGHNHHGHNPAHGE-PGHVHDEHCGHDHHDHHHNPTHGHLNPIHDNEI 289
Query: 190 SSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCP 249
SV++ SE +D + WL++L+ EKG+D+ R KGILS+ G +++ VFQ VH L+G
Sbjct: 290 RSVSLSSEAPVDGVKFTRWLDKLLAEKGQDILRAKGILSIKGEDKRLVFQAVHMILEGEL 349
Query: 250 GKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+ W E R+++ VFIGR+LDE ALR GF+ C+A
Sbjct: 350 QQPWKEGEHRLSRAVFIGRHLDEAALRAGFEACIA 384
>gi|367475841|ref|ZP_09475273.1| putative cobalamin synthesis protein/P47K family protein
[Bradyrhizobium sp. ORS 285]
gi|365271877|emb|CCD87741.1| putative cobalamin synthesis protein/P47K family protein
[Bradyrhizobium sp. ORS 285]
Length = 348
Score = 207 bits (526), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 174/289 (60%), Gaps = 14/289 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L ++K G+FD I++ETTGLA PAPV +TF DE V + +
Sbjct: 65 MNNGCICCTVRGDLVRIISGLMRRK-GKFDAIIVETTGLADPAPVAQTFFVDEDVQKNAR 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLVT+ EL + RI+
Sbjct: 124 LDAVVTVADAKWLSDRLKDAP------EAKNQIAFADVIVLNKTDLVTKPELAEVEARIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-DSEVHVDNSHCATHHHESAHGHHEGHH 180
IN A + + + + VL G +DL+RI + E N+ HH H H HH
Sbjct: 178 AINPYARLHRTERCQIAISDVLERGAFDLDRILEIEPEFLNAGDDHDHHHHDHDHGHDHH 237
Query: 181 H------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQ 234
H H HD + S+++ S+ LD + WL+ L++ +G + R KGIL+ +
Sbjct: 238 HHHDHGLKHYHDEEMQSLSLRSDKPLDPSKFMPWLQNLVQTEGGKILRSKGILAFQDDDD 297
Query: 235 QYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+YVFQGVH L+G + W PDE R +++VFIGR L E A+R+GF+ C+
Sbjct: 298 RYVFQGVHMMLEGDHQRKWKPDEARQSRVVFIGRELPEDAIREGFERCI 346
>gi|114326834|ref|YP_743991.1| GTP-dependent regulatory protein [Granulibacter bethesdensis
CGDNIH1]
gi|114315008|gb|ABI61068.1| GTP-dependent regulatory protein [Granulibacter bethesdensis
CGDNIH1]
Length = 334
Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 113/284 (39%), Positives = 168/284 (59%), Gaps = 28/284 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ G+FD I++ETTGLA PAPV +TF DE V + +
Sbjct: 75 MNNGCVCCTVRGDLIRIISGLMKRR-GRFDGIIVETTGLANPAPVAQTFFMDEDVRRNAR 133
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VDS+H + L E EA+ Q+A+AD IILNK DL T EL +L RIK
Sbjct: 134 LDAIVTVVDSRHLPRQLEE------STEAMTQIAFADVIILNKTDLATPEELDALEARIK 187
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN ++ A V + +LG+ + L+RI A+ H
Sbjct: 188 AINPHTVIRRAHRADVPVTELLGLDAFSLDRI-----------------LANDPDFLDHD 230
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+H H V+S+++ G LD + + W+ L++ KG+DL R KGIL +G ++++ FQ V
Sbjct: 231 SHDHSEGVTSISLEVNGPLDPQKFNAWIAELLQTKGQDLLRTKGILHYAGEDKRFAFQAV 290
Query: 242 HSTLDGCPGKAWGPDEK-RINKLVFIGRNLDETALRKGFKGCLA 284
H D G GP E + +++VFIGR+L+ LR+GF+ C A
Sbjct: 291 HMLAD---GDYIGPAEPGQRSRIVFIGRDLNRPQLRRGFEACRA 331
>gi|146343075|ref|YP_001208123.1| cobalamin synthesis protein/P47K family protein [Bradyrhizobium sp.
ORS 278]
gi|146195881|emb|CAL79908.1| Putative cobalamin synthesis protein/P47K family protein
[Bradyrhizobium sp. ORS 278]
Length = 348
Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 174/289 (60%), Gaps = 14/289 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L ++K G+FD I++ETTGLA PAPV +TF DE V + +
Sbjct: 65 MNNGCICCTVRGDLVRIISGLMRRK-GKFDAIIVETTGLADPAPVAQTFFVDEDVQKNAR 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLVT+ EL + RI+
Sbjct: 124 LDAVVTVADAKWLSDRLKDAP------EAKNQIAFADVIVLNKTDLVTKPELAEVEARIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-DSEVHVDNSHCATHHHESAHGHHEGHH 180
IN A + + V + VL G +DL+RI + E N+ HH H H HH
Sbjct: 178 AINPYARLHRTERCQVAIADVLERGAFDLDRILEIEPEFLNAGDDHDHHHHDHDHGHDHH 237
Query: 181 H------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQ 234
H H HD + S+++ S+ LD + WL+ L++ +G + R KGIL+ +
Sbjct: 238 HHHDHGLKHYHDEEMQSLSLRSDKPLDPSKFMPWLQNLVQTEGGKILRSKGILAFQDDDD 297
Query: 235 QYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+YVFQGVH L+G + W PDE R +++VFIGR L E A+R+GF+ C+
Sbjct: 298 RYVFQGVHMMLEGDHQRKWKPDESRQSRVVFIGRELPEDAIREGFERCI 346
>gi|365887531|ref|ZP_09426368.1| putative cobalamin synthesis protein/P47K family protein
[Bradyrhizobium sp. STM 3809]
gi|365336856|emb|CCD98899.1| putative cobalamin synthesis protein/P47K family protein
[Bradyrhizobium sp. STM 3809]
Length = 348
Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 174/289 (60%), Gaps = 14/289 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L ++K G+FD I++ETTGLA PAPV +TF DE V + +
Sbjct: 65 MNNGCICCTVRGDLVRIISGLMRRK-GKFDAIIVETTGLADPAPVAQTFFVDEDVQKNAR 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLVT+ EL + RI+
Sbjct: 124 LDAVVTVADAKWLSDRLKDAP------EAKNQIAFADVIVLNKTDLVTKPELAEVEARIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-DSEVHVDNSHCATHHHESAHGHHEGHH 180
IN A + + V + VL G +DL+RI + E N+ HH H H HH
Sbjct: 178 AINPYARLHRTERCQVAIADVLERGAFDLDRILEIEPEFLNAGDDHDHHHHDHDHGHDHH 237
Query: 181 H------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQ 234
H H HD + S+++ S+ LD + WL+ L++ +G + R KGIL+ +
Sbjct: 238 HHHDHGLKHYHDEEMQSLSLRSDKPLDPSKFMPWLQNLVQTEGGKILRSKGILAFQDDDD 297
Query: 235 QYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+YVFQGVH L+G + W PDE R +++VFIGR L E A+R+GF+ C+
Sbjct: 298 RYVFQGVHMMLEGDHQRKWKPDEARQSRVVFIGRELPEDAIREGFERCI 346
>gi|85714914|ref|ZP_01045900.1| Cobalamin synthesis protein, CobW [Nitrobacter sp. Nb-311A]
gi|85698400|gb|EAQ36271.1| Cobalamin synthesis protein, CobW [Nitrobacter sp. Nb-311A]
Length = 347
Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 116/297 (39%), Positives = 176/297 (59%), Gaps = 24/297 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K+ G+FD I++ETTGLA PAPV +TF DE V + K
Sbjct: 61 MNNGCICCTVRGDLMRILADLMKR-NGKFDAIIVETTGLADPAPVAQTFFVDENVGKKTK 119
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I++NK DLV+ EL + RI+
Sbjct: 120 LDAVVTVTDAKWLNDRLKDAP------EAKNQIAFADVILINKTDLVSSDELSEIEARIR 173
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + + + ++ +L +DL+RI + ++ S H+ HGHH H
Sbjct: 174 GINPYAKLHRTQRAQIALNEILERNAFDLDRI---LDIEPSFLEGKDHDHDHGHHHHDHD 230
Query: 182 --------------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGIL 227
H HD + S+++ ++ LD D+ W+E L++++G ++ R KGIL
Sbjct: 231 HDHDHKHADDHGKLKHYHDEEMQSISLKTDKPLDADKFFPWVEDLVQKEGPNILRSKGIL 290
Query: 228 SVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
S ++++VFQGVH LDG + W DEKR +++VFIGRNL E + +GF+ C+A
Sbjct: 291 SFKDEDRRFVFQGVHMILDGDHQRPWKADEKRQSRIVFIGRNLPEQMIAEGFESCIA 347
>gi|410418456|ref|YP_006898905.1| hypothetical protein BN115_0656 [Bordetella bronchiseptica MO149]
gi|408445751|emb|CCJ57412.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
Length = 340
Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 117/282 (41%), Positives = 175/282 (62%), Gaps = 9/282 (3%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+ +L +L ++ G+FD IV+ETTG+A PAPV++TF DE V + +
Sbjct: 64 MNNGCICCTVRGDLIGILHKLLRRP-GRFDAIVVETTGVADPAPVVQTFMMDEEVREKTE 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VIT+VD+KH L + + EA +Q+ YAD +++NK+DLV++ E + R+
Sbjct: 123 LDAVITMVDAKHFPLRLADSQ------EAEDQIVYADVVLINKVDLVSDGEADQVQRRVA 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN A + +D+ +L +G +DL+R ++ E + C H H H H
Sbjct: 177 AINPYAACHRVQRAEIDLARILSIGAFDLQRCVELEARAAPAGCGHEHEHDEHCHGGTDH 236
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
H+H H+ +V SV++ G LD W+ L+E++G D+ RMKGIL++ ++Y+ QG
Sbjct: 237 HHHHHEISVMSVSL-QAGALDGRRFFPWIHSLVEKQGPDILRMKGILALDDDARRYIIQG 295
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
VH ++G +AW DE R +KLVFIGR LD ALR GF+ C
Sbjct: 296 VHMIVEGEHQRAWRDDEPRASKLVFIGRGLDAQALRAGFEAC 337
>gi|240851048|ref|YP_002972448.1| cobalamin synthesis protein, P47K family [Bartonella grahamii
as4aup]
gi|240268171|gb|ACS51759.1| cobalamin synthesis protein, P47K family [Bartonella grahamii
as4aup]
Length = 340
Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 176/288 (61%), Gaps = 20/288 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L ++ +FD I+IETTGLA P PV +TF D+ V +
Sbjct: 65 MNNGCVCCTVRGDLIRILESLMQRSH-RFDAIIIETTGLADPVPVAQTFFMDDTVHEKTA 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI +VD+KH L + + E EQ+A++D ++LNKIDLV+E E I
Sbjct: 124 LDSVIAVVDAKHLPSQLKKSR------EVEEQIAFSDIVLLNKIDLVSEKERAHAQSLIL 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHVDNSHCATH------HHESAHG 174
IN A + + ++ +D +L G +DL+R +D++ H + A H +H+ AH
Sbjct: 178 AINPRAIIYATERANIPLDKLLNRGSFDLQRTLDNDPHFLDHQHADHVCGPDCNHDHAH- 236
Query: 175 HHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQ 234
HH + +HD ++SV++ + G L ++ W++++ +++G D+ R+KGI++ +
Sbjct: 237 ----HHKSTIHDITITSVSLKT-GALQPEKFFPWIQQITQQQGPDILRLKGIIAFQRDDD 291
Query: 235 QYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
+YV QG+H L+G + W DEKR ++LVFIGR+LD L+ GF+ C
Sbjct: 292 RYVIQGIHMLLEGQHQRPWREDEKRESRLVFIGRSLDAEKLKTGFENC 339
>gi|285018994|ref|YP_003376705.1| cobalamin synthesis protein [Xanthomonas albilineans GPE PC73]
gi|283474212|emb|CBA16713.1| putative cobalamin synthesis protein [Xanthomonas albilineans GPE
PC73]
Length = 321
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 24/281 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K++ FD I+IETTGLA PAPV +TF D V+ +
Sbjct: 62 MNNGCICCTVRGDLIRILDGLMKRRD--FDGILIETTGLADPAPVAQTFYVDPDVAAKTR 119
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD+ + HL+E +EA EQ+A+AD I+LNKIDLV +L ++ RI+
Sbjct: 120 LDAIVTVVDAVNLATHLDEA------HEAAEQIAFADVILLNKIDLVQAADLEAVQARIR 173
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + ++ V +D VLG+ + LER+ E+ D H
Sbjct: 174 SINPYARIHHSQRSDVPLDAVLGLNAFTLERV-LEIEPD---------------FLDEDH 217
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
H+H+ + SV++ LD + W L+ G D+ R KGIL ++G ++YV QGV
Sbjct: 218 AHVHEEDIGSVSLQLHTPLDPLRFELWFGDLLRTHGTDILRCKGILELAGESRRYVIQGV 277
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
H DG AW + R++KLVFIGRNL+ LR+GF C
Sbjct: 278 HMLTDGNFLDAWPAGKPRVSKLVFIGRNLERMQLREGFSAC 318
>gi|225629439|ref|ZP_03787472.1| low affinity zinc transport membrane protein [Brucella ceti str.
Cudo]
gi|261757175|ref|ZP_06000884.1| cobalamin synthesis protein/P47K [Brucella sp. F5/99]
gi|225615935|gb|EEH12984.1| low affinity zinc transport membrane protein [Brucella ceti str.
Cudo]
gi|261737159|gb|EEY25155.1| cobalamin synthesis protein/P47K [Brucella sp. F5/99]
Length = 345
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 173/288 (60%), Gaps = 18/288 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V
Sbjct: 71 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRAKTG 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL ++ ++
Sbjct: 130 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPEELAAVEATVR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAH--GHHEGH 179
IN A + + S+ +D VL G +DL+R+ +DN H + H G H
Sbjct: 184 AINPHAIIHRTERASIPLDRVLDRGAFDLKRV-----LDNDPHFLDHDDPDHVCGPDCDH 238
Query: 180 HHNH---MHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQY 236
H+H +HD V SV++ + G +D + W++ + + +G ++ R+KGI++ +Y
Sbjct: 239 DHDHASPIHDVTVKSVSLRT-GEIDPAKFFPWIQNITQTQGPNILRLKGIIAFKDDPDRY 297
Query: 237 VFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
V QGVH ++G +AW P+EK ++LVFIGR LD AL+ GF+ C A
Sbjct: 298 VVQGVHMIIEGDHQRAWKPEEKHESRLVFIGRELDPAALKAGFENCRA 345
>gi|395782459|ref|ZP_10462853.1| hypothetical protein MCY_01411 [Bartonella rattimassiliensis 15908]
gi|395418536|gb|EJF84859.1| hypothetical protein MCY_01411 [Bartonella rattimassiliensis 15908]
Length = 349
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 176/290 (60%), Gaps = 17/290 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ +FD I+IETTGLA P PV +TF D V +
Sbjct: 67 MNNGCVCCTVRGDLIRIMESLMQRSH-RFDAIIIETTGLADPIPVAQTFFMDNTVQEKTT 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD +I +VD++H L + +EA EQ+A++D I+LNKIDLV E + I
Sbjct: 126 LDSIIAVVDAQHLPSQLKKS------HEAEEQIAFSDIILLNKIDLVNTQEHAHVRSLIL 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-DSEVH-VDNSHCATHHHESAH------ 173
IN A + + ++ ++ +L G +DL+RI +++ H +D+ H +HH S H
Sbjct: 180 AINPHAILYETERANIPLEKLLNRGSFDLQRILENDPHFLDHQHSDNNHHHSDHVCSPDC 239
Query: 174 -GHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGS 232
HE H + MHD ++SV++ + G L ++ W++ + +++G D+ R+KGI++ G
Sbjct: 240 THDHEHHPVSTMHDLTITSVSLKT-GVLQPEKFFPWIQYVTQQQGPDILRLKGIIAFQGD 298
Query: 233 EQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
+ +YV QG+H LDG + W DEKR ++LVFIGR LD L+ GF+ C
Sbjct: 299 DDRYVIQGIHMILDGQHQRPWRADEKRESRLVFIGRTLDGEKLKTGFENC 348
>gi|365882623|ref|ZP_09421824.1| putative cobalamin synthesis protein/P47K family protein
[Bradyrhizobium sp. ORS 375]
gi|365289005|emb|CCD94355.1| putative cobalamin synthesis protein/P47K family protein
[Bradyrhizobium sp. ORS 375]
Length = 346
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 174/289 (60%), Gaps = 14/289 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L ++K G+FD I++ETTGLA PAPV +TF DE V + +
Sbjct: 63 MNNGCICCTVRGDLVRIISGLMRRK-GKFDAIIVETTGLADPAPVAQTFFVDEDVQKNAR 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLVT+ EL + RI+
Sbjct: 122 LDAVVTVADAKWLSDRLKDAP------EAKNQIAFADVIVLNKTDLVTKPELAEVEARIR 175
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-DSEVHVDNSHCATHHHESAHGHHEGHH 180
IN A + + + + VL G +DL+RI + E N+ HH H H HH
Sbjct: 176 AINPYARLHRTERCQIAIADVLERGAFDLDRILEIEPEFLNAGDDHDHHHHDHDHGHDHH 235
Query: 181 H------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQ 234
H H HD + S+++ S+ LD + WL+ L++ +G + R KGIL+ +
Sbjct: 236 HHHDHGLKHYHDEEMQSLSLRSDKPLDPSKFMPWLQNLVQTEGGKILRSKGILAFQDDDD 295
Query: 235 QYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+YVFQGVH L+G + W PDE R +++VFIGR L E A+R+GF+ C+
Sbjct: 296 RYVFQGVHMMLEGDHQRKWKPDEARQSRVVFIGRELPEDAIREGFERCI 344
>gi|421749873|ref|ZP_16187226.1| P47K:cobalamin synthesis CobW [Cupriavidus necator HPC(L)]
gi|409771180|gb|EKN53564.1| P47K:cobalamin synthesis CobW [Cupriavidus necator HPC(L)]
Length = 351
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/301 (39%), Positives = 174/301 (57%), Gaps = 27/301 (8%)
Query: 2 VNNGCLCCTV--RGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+ NGC+CC V R DLV++L +L + + +FDHI++ET+GLA P PV TF D V++
Sbjct: 59 MTNGCICCVVDVRTDLVRILQKLLAQPE-RFDHIIVETSGLADPTPVAATFFMDHEVARE 117
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
V LDGV+TLVD+ H HL++ + R N+AV+Q+ ADRI++NK DL + +L R
Sbjct: 118 VALDGVVTLVDALHIESHLDDPRLRGFDNQAVDQIVAADRIVINKTDLADPAAVDALEAR 177
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYD--LERIDSE--------------VHVDNSH 163
++ +N A + + Y VD+ +LG+GG+ L +D HV + H
Sbjct: 178 LRRLNEGAQILRSNYARVDLRNILGIGGFTPGLAVLDDSGDEHDHGHGDDHGEGHVCDEH 237
Query: 164 CATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRM 223
C H H H H HD +VSSV++V + D D + + L+ +G+DL+R+
Sbjct: 238 C-------GHDHDHDREHAHRHDPSVSSVSLVFDRPFDGDRLASAIRALLAAQGDDLFRI 290
Query: 224 KGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
KGI++V+GSE+++V Q VH LD G W D R +KLVFIGRNLD L+ CL
Sbjct: 291 KGIVAVTGSERRHVLQAVHRQLDLHAGDPW-LDAPRDSKLVFIGRNLDRGRLQTMLGICL 349
Query: 284 A 284
A
Sbjct: 350 A 350
>gi|316932405|ref|YP_004107387.1| cobalamin synthesis protein P47K [Rhodopseudomonas palustris DX-1]
gi|315600119|gb|ADU42654.1| cobalamin synthesis protein P47K [Rhodopseudomonas palustris DX-1]
Length = 349
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 175/291 (60%), Gaps = 15/291 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV++L L K+K G+FD I++ETTGLA PAPV +TF DE V +
Sbjct: 65 MNNGCVCCTVRGDLVRILAGLMKRK-GKFDAIIVETTGLADPAPVAQTFFVDEDVQNAAR 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K + L + EA Q+A+AD I+LNK DLVT EL + RI+
Sbjct: 124 LDAVVTVADAKWLSERLKDAP------EAKNQIAFADVIVLNKTDLVTPAELAEVEARIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI--------DSEVHVDNSHCATHHHESAH 173
IN A + + V + VL G +DL+RI +++ H + HH H
Sbjct: 178 AINPYAKLHRTERCQVALADVLERGAFDLDRILEIEPDFLEADDHDHHHDHDHGHHHHGH 237
Query: 174 GHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSE 233
HH GH H HD + S+++ S+ LD + WL++L++ +G + R KGIL+ G +
Sbjct: 238 DHHHGHGLKHYHDEHMQSLSLKSDKPLDPAKFMPWLQQLVQTEGGKILRSKGILAFRGDD 297
Query: 234 QQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+YVFQGVH L+G +AW E R +++VFIGR+L E A+R GF C+A
Sbjct: 298 DRYVFQGVHMMLEGDHQRAWRDGEVRESRVVFIGRDLPEQAIRDGFDKCIA 348
>gi|86751654|ref|YP_488150.1| cobalamin synthesis protein, P47K [Rhodopseudomonas palustris HaA2]
gi|86574682|gb|ABD09239.1| Cobalamin synthesis protein, P47K [Rhodopseudomonas palustris HaA2]
Length = 347
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 174/289 (60%), Gaps = 13/289 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV++L L K+K G+FD I++ETTGLA PAPV +TF DE V +
Sbjct: 65 MNNGCVCCTVRGDLVRILGGLMKRK-GKFDAIIVETTGLADPAPVAQTFFVDEDVMASAR 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLVT+ EL + RI+
Sbjct: 124 LDAVVTVADAKWLSDRLKDAP------EAKNQIAFADVIVLNKTDLVTKAELAEVEARIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDS------EVHVDNSHCATHHHESAHGH 175
IN A + + + + VL G +DL+RI + D+ H H H H
Sbjct: 178 AINPYARLHHTERCQIPIADVLDRGAFDLDRILEIEPEFLDAGDDHDHHHDHDHGHHHHD 237
Query: 176 HEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQ 235
H GH H HD + S+++ S+ +D + WL++L++ +G + R KGILS +G + +
Sbjct: 238 HHGHGLKHYHDEDMQSLSLKSDKPIDPAKFMPWLQQLVQTEGGKILRSKGILSFAGDDDR 297
Query: 236 YVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
YVFQGVH L+G +AW DE R +++VFIGR L E A+R GF C+A
Sbjct: 298 YVFQGVHMMLEGDHQRAWKDDEPRESRVVFIGRELPEQAIRDGFAKCVA 346
>gi|223940481|ref|ZP_03632331.1| cobalamin synthesis protein P47K [bacterium Ellin514]
gi|223890843|gb|EEF57354.1| cobalamin synthesis protein P47K [bacterium Ellin514]
Length = 358
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/306 (39%), Positives = 173/306 (56%), Gaps = 34/306 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGCLCC VRGDL++ L L KK+ +FD+++IETTGLA P+PV TF EL Q ++
Sbjct: 63 LNNGCLCCRVRGDLIRSLNDLLIKKRKRFDYVIIETTGLADPSPVAHTFMASELAEQ-MR 121
Query: 62 LDGVITLVDSKHAMQHLNE-VKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
LDG++T+VD++H + LN+ +PR Q+A+AD I+LNK DLVT EL + RI
Sbjct: 122 LDGIVTVVDARHLEKELNDGPEPR-------AQIAFADVILLNKTDLVTPEELAKVEGRI 174
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
K +N +A + +++ +L + +L E+ ++ H H HE H
Sbjct: 175 KSMNPLAKIHRTVKSEIEVGKILNLKARELSAPMPELKQEHHH---HDHECGEDCDHDHK 231
Query: 181 HNHMH----------------------DSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGE 218
H+H H D V S I E LDL +++ WL L+ G
Sbjct: 232 HDHDHKCDEHCDHDHDHNHEGHVHHHHDELVKSFYIEEERPLDLKKLEKWLGELLNSLGA 291
Query: 219 DLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKG 278
D+YR KG+LS+ G ++ VFQGV LD P + W P EK+ ++LVFIGR LDE +R+G
Sbjct: 292 DIYRSKGVLSIKGMPKRVVFQGVQMMLDSAPDRFWNPGEKKKSQLVFIGRELDEKKIREG 351
Query: 279 FKGCLA 284
F+ C+A
Sbjct: 352 FEQCVA 357
>gi|338973180|ref|ZP_08628548.1| putative zinc chaperone [Bradyrhizobiaceae bacterium SG-6C]
gi|338233639|gb|EGP08761.1| putative zinc chaperone [Bradyrhizobiaceae bacterium SG-6C]
Length = 351
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 168/294 (57%), Gaps = 18/294 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L K+K G+FD I++ETTGLA PAPV +TF DE V +
Sbjct: 65 MNNGCVCCTVRGDLVRIIDGLMKRK-GKFDAIILETTGLADPAPVAQTFFVDEDVREKTA 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLVT+ EL + RI+
Sbjct: 124 LDAVVTVADAKWLSDRLKDAP------EAKNQIAFADVIVLNKTDLVTKPELAEVEARIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-----------DSEVHVDNSHCATHHHE 170
IN A + + V + VL G +DL+RI + + H H
Sbjct: 178 AINPYATLHKTQRAQVALSDVLERGAFDLDRILEIEPEFLDDGGHDHDHHHHDHHGHDHH 237
Query: 171 SAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVS 230
H H HD + S+++ +E +D + WL+ L+ + GE + R KGILS
Sbjct: 238 HHDHGHSHGGMKHYHDEDMQSLSLRTEKPIDPTKFMPWLQELVAKDGEKILRSKGILSFK 297
Query: 231 GSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
G + +YVFQGVH L+G + W DEKR +++VFIGR L E A+R+GF+ +A
Sbjct: 298 GDDDRYVFQGVHMMLEGDHQRKWRNDEKRESRVVFIGRELPEQAIREGFEKAIA 351
>gi|92118928|ref|YP_578657.1| cobalamin synthesis protein, P47K [Nitrobacter hamburgensis X14]
gi|91801822|gb|ABE64197.1| cobalamin synthesis protein, P47K [Nitrobacter hamburgensis X14]
Length = 355
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/302 (39%), Positives = 177/302 (58%), Gaps = 26/302 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K+K G+FD I++ETTGLA PAPV +TF DE V + K
Sbjct: 61 MNNGCICCTVRGDLMRILSDLMKRK-GKFDAIIVETTGLADPAPVAQTFFVDENVGKQTK 119
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I++NK DLV+ EL + RI+
Sbjct: 120 LDAVVTVTDAKWLNDRLKDAP------EAKNQIAFADVILINKTDLVSAAELAEVEARIR 173
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-DSEVHVDNSHCATHHHESAHGHHEGHH 180
IN A + + + ++ +L +DL+RI D E ++ +H H+ HGH H
Sbjct: 174 GINPYAKLHRTQRAQIPLNEILERNAFDLDRILDFEPAFLDAKDHSHGHDHDHGHDHDHG 233
Query: 181 H------------------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYR 222
+ H HD + S+++ ++ LD D+ W+E L++++G + R
Sbjct: 234 NGHDHHDHDHDHEDQHGGLKHYHDEEMQSISLKTDKPLDADKFFPWVEDLVQKEGPSILR 293
Query: 223 MKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
KGILS ++++VFQGVH LDG + W DEKR +++VFIGRNL E + GF+ C
Sbjct: 294 SKGILSFKDEDRRFVFQGVHMILDGDHQRPWKEDEKRQSRIVFIGRNLPEKTIADGFESC 353
Query: 283 LA 284
+A
Sbjct: 354 IA 355
>gi|414170264|ref|ZP_11425878.1| hypothetical protein HMPREF9696_03733 [Afipia clevelandensis ATCC
49720]
gi|410884936|gb|EKS32756.1| hypothetical protein HMPREF9696_03733 [Afipia clevelandensis ATCC
49720]
Length = 351
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 168/294 (57%), Gaps = 18/294 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L K+K G+FD I++ETTGLA PAPV +TF DE V +
Sbjct: 65 MNNGCVCCTVRGDLVRIIDGLMKRK-GKFDAIILETTGLADPAPVAQTFFVDEDVREKTA 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLVT+ EL + RI+
Sbjct: 124 LDAVVTVADAKWLSDRLKDAP------EAKNQIAFADVIVLNKTDLVTKPELAEVEARIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-----------DSEVHVDNSHCATHHHE 170
IN A + + V + VL G +DL+RI + + H H
Sbjct: 178 AINPYATLHKTQRAQVALSDVLERGAFDLDRILEIEPEFLDDGGHDHDHHHHDHHGHDHH 237
Query: 171 SAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVS 230
H H HD + S+++ +E +D + WL+ L+ + GE + R KGILS
Sbjct: 238 HHDHGHSHGGMKHYHDEDMQSLSLRTEKPIDPTKFMPWLQELVAKDGEKILRSKGILSFK 297
Query: 231 GSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
G + +YVFQGVH L+G + W DEKR +++VFIGR L E A+R+GF+ +A
Sbjct: 298 GDDDRYVFQGVHMMLEGDHQREWRNDEKRESRVVFIGRELPEQAIREGFEKTIA 351
>gi|148252899|ref|YP_001237484.1| cobalamin synthesis protein/P47K family protein [Bradyrhizobium sp.
BTAi1]
gi|146405072|gb|ABQ33578.1| Putative cobalamin synthesis protein/P47K family protein
[Bradyrhizobium sp. BTAi1]
Length = 345
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 174/288 (60%), Gaps = 13/288 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L ++K G+FD I++ETTGLA PAPV +TF DE V + +
Sbjct: 63 MNNGCICCTVRGDLVRIISGLMRRK-GKFDAIIVETTGLADPAPVAQTFFVDEDVQKNAR 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLVT+ EL + RI+
Sbjct: 122 LDAVVTVADAKWLSDRLKDAP------EAKNQIAFADVIVLNKTDLVTKPELAEVEARIR 175
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-DSEVHVDNSHCATHHHESAHGHHEGHH 180
IN A + + + + VL G +DL+RI + E N+ HH H+ HH
Sbjct: 176 AINPYARLHRTERCQIAISDVLERGAFDLDRILEIEPEFLNAGDDHDHHHDHDHGHDHHH 235
Query: 181 H-----NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQ 235
H H HD + S+++ S+ LD + WL+ L++ +G + R KGIL+ + +
Sbjct: 236 HHDHGLKHYHDEEMQSLSLRSDKPLDPSKFMPWLQNLVQIEGGKILRSKGILAFQDDDDR 295
Query: 236 YVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
YVFQGVH L+G + W PDE R +++VFIGR L E A+R+GF+ C+
Sbjct: 296 YVFQGVHMMLEGDHQRKWKPDEVRQSRVVFIGRELPEDAIREGFERCI 343
>gi|427824069|ref|ZP_18991131.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|410589334|emb|CCN04401.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 344
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/286 (39%), Positives = 170/286 (59%), Gaps = 13/286 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+ +L +L ++ G+FD IV+ETTG+A PAPV++TF DE V + +
Sbjct: 64 MNNGCICCTVRGDLIGILHKLLRRP-GRFDAIVVETTGVADPAPVVQTFMMDEEVREKTE 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VIT+VD+KH L + + EA +Q+ YAD +++NK+DLV++ E + R+
Sbjct: 123 LDAVITMVDAKHFPLRLADSQ------EAEDQIVYADVVLINKVDLVSDGEADQVQRRVA 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN A + +D+ +L +G +DL+R ++ E + C H H
Sbjct: 177 AINPYAACHRVQRAEIDLARILSIGAFDLQRCVELEARAAPAGCGHEHEHEHEHDEHCHG 236
Query: 181 HNHMH----DSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQY 236
H + +V SV++ G LD W+ L+E++G D+ RMKGIL++ ++Y
Sbjct: 237 GTDHHHHHHEISVMSVSL-QAGALDGRRFFPWIHSLVEKQGPDILRMKGILALDDDARRY 295
Query: 237 VFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
+ QGVH ++G +AW DE R +KLVFIGR LD ALR GF+ C
Sbjct: 296 IIQGVHMIVEGEHQRAWRDDEPRASKLVFIGRGLDAQALRAGFEAC 341
>gi|73542762|ref|YP_297282.1| cobalamin synthesis protein/P47K:cobalamin synthesis CobW,
C-terminal, partial [Ralstonia eutropha JMP134]
gi|72120175|gb|AAZ62438.1| Cobalamin synthesis protein/P47K:Cobalamin synthesis CobW,
C-terminal [Ralstonia eutropha JMP134]
Length = 360
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 173/296 (58%), Gaps = 24/296 (8%)
Query: 2 VNNGCLCCTV--RGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+ NGC+CC V R DLV++L +L ++ + +FDHI++ET+GLA P PV TF D V+Q
Sbjct: 67 MTNGCICCVVDVRTDLVRILQKLLERPE-RFDHILVETSGLADPTPVAATFFMDHEVAQQ 125
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
V+LDG++TLVD+ H HL++ + N+AV+Q+ ADR+ILNK DLV+ L +L R
Sbjct: 126 VRLDGILTLVDAVHIEDHLDDPQLTGFDNQAVDQIVAADRVILNKTDLVSAARLDALEAR 185
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYD------------LERIDSEVHVDNSHCATH 167
I +N A + + Y VD+ +LG+GG+ D HV + HC
Sbjct: 186 IHKLNEGAQILRSNYAQVDLGKILGIGGFTPGIVQMEDHGHAHHEHDHAGHVCDEHCDHA 245
Query: 168 HHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGIL 227
H E+ HGH HD +V+SV++V + D ++ L L+ +G+D++RMKGI+
Sbjct: 246 HDEAEHGHR--------HDPSVTSVSLVFDQPFDRQRLEYGLRALLAAQGDDVFRMKGIV 297
Query: 228 SVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+V+G Q+YV Q VH +D WG + + +K VFIGRNLD+ L+ C+
Sbjct: 298 AVAGDTQRYVLQAVHRLMDFRADAPWGTEAPQ-SKFVFIGRNLDKQRLQTLLNVCM 352
>gi|354593674|ref|ZP_09011717.1| COBW domain-containing protein 1 [Commensalibacter intestini A911]
gi|353672785|gb|EHD14481.1| COBW domain-containing protein 1 [Commensalibacter intestini A911]
Length = 352
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/296 (41%), Positives = 179/296 (60%), Gaps = 21/296 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCT+RGDLV++L L K++ +FD I++ETTGLA PAPV +TF DE V Q +
Sbjct: 64 MNNGCVCCTIRGDLVRILGTLMKRRT-KFDGIIVETTGLADPAPVAQTFFVDEDVKQKTR 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI +VD++H MQ L+E K EAV Q+A+AD I+LNK DLV L ++ +R+K
Sbjct: 123 LDAVIAVVDAQHVMQTLDESK------EAVNQIAFADVILLNKTDLVDAATLKTVEQRVK 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVD-------------NSHCATHH 168
IN + + G + +D +L GG+DL++ E+ D + H H
Sbjct: 177 AINPYVALYHTQKGQIALDKILDRGGFDLKKA-LELAPDFLDNHHDHDHDHDHDHDHDHD 235
Query: 169 HESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILS 228
H H H H +H H V+S++++ + LD + D W+ ++++ G +L R KGIL+
Sbjct: 236 HRHKHDHDHDHEAHHHHGDGVTSISLLEDKPLDSKKFDLWIGSVLQQFGIELLRTKGILN 295
Query: 229 VSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
S S++ + FQ VH DG + W EKR ++LVFIGR+LDE LR GFK C+A
Sbjct: 296 FSDSKECFAFQAVHMMADGDFIRPWKEKEKRCSRLVFIGRHLDEKKLRDGFKSCIA 351
>gi|209542789|ref|YP_002275018.1| cobalamin synthesis protein P47K [Gluconacetobacter diazotrophicus
PAl 5]
gi|209530466|gb|ACI50403.1| cobalamin synthesis protein P47K [Gluconacetobacter diazotrophicus
PAl 5]
Length = 332
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 120/283 (42%), Positives = 171/283 (60%), Gaps = 24/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K++ G+FD I++ETTGLA PAPV +TF DE V +
Sbjct: 73 MNNGCICCTVRGDLIRILGSLMKRR-GKFDGIIVETTGLADPAPVAQTFFVDEDVRGKTR 131
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+ + +Q L+E P EAV Q+A+AD IILNK DLV E + ++ RI+
Sbjct: 132 LDAVVTVVDAMNVLQTLDE-SP-----EAVNQIAFADVIILNKTDLVDEAAIAAIESRIR 185
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
INA+A + A+ G V + VL GG+DL R H +++H H E
Sbjct: 186 SINAVARLHRAQRGDVALTDVLDQGGFDLARA-------LEHAPRFLEDTSHSHEEN--- 235
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
V+S++ V E LD + W+ L++E+G D+ R KGIL+ +G +++ FQ V
Sbjct: 236 -------VTSMSYVMEEPLDAAKFQAWIGALLQEQGADILRAKGILNYAGENRRFAFQAV 288
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG W E R ++LVFIGRNL+ LR+GF+ C A
Sbjct: 289 HMMADGDFIGPWKEGEARESRLVFIGRNLNRPRLRRGFESCRA 331
>gi|414171601|ref|ZP_11426512.1| hypothetical protein HMPREF9695_00158 [Afipia broomeae ATCC 49717]
gi|410893276|gb|EKS41066.1| hypothetical protein HMPREF9695_00158 [Afipia broomeae ATCC 49717]
Length = 350
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 119/293 (40%), Positives = 166/293 (56%), Gaps = 17/293 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L K+K G+FD I++ETTGLA PAPV +TF DE V +
Sbjct: 65 MNNGCVCCTVRGDLVRIIDGLMKRK-GKFDAIILETTGLADPAPVAQTFFVDEDVREKTM 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLVT+ EL + RI+
Sbjct: 124 LDAVVTVADAKWLSDRLKDAP------EAKNQIAFADVIVLNKTDLVTKPELAEVEARIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHHES 171
IN A + + V + VL G +DL+RI H + H H
Sbjct: 178 AINPYATLHRTERAQVKLSDVLERGAFDLDRILEIEPEFLDDGGHDHDHHHHDHDGHDHH 237
Query: 172 AHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSG 231
H H HD + S+++ ++ +D + WL+ L+ + GE + R KGILS G
Sbjct: 238 HDHGHSHGGMKHYHDEDMQSLSLRTDKLIDPTKFMPWLQELVAKDGEKILRSKGILSFKG 297
Query: 232 SEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+ +YVFQGVH L+G + W DEKR ++LVFIGR L E A+R GF +A
Sbjct: 298 DDDRYVFQGVHMMLEGDHQRKWRNDEKRESRLVFIGRELPEQAIRDGFAKTIA 350
>gi|414165262|ref|ZP_11421509.1| hypothetical protein HMPREF9697_03410 [Afipia felis ATCC 53690]
gi|410883042|gb|EKS30882.1| hypothetical protein HMPREF9697_03410 [Afipia felis ATCC 53690]
Length = 364
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 173/311 (55%), Gaps = 38/311 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L K+K G+FD I++ETTGLA PAPV +TF DE VSQ
Sbjct: 64 MNNGCVCCTVRGDLVRIIDGLMKRK-GKFDAIILETTGLADPAPVAQTFFVDEEVSQKTA 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K + L + EA Q+A+AD I+LNKIDLV + EL + RI+
Sbjct: 123 LDAVVTVADAKWLSERLKDAP------EAKNQIAFADVIVLNKIDLVNKDELAEVEGRIR 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG--- 178
IN A + + +V + VLG G +DL+RI + ++ + H H H G
Sbjct: 177 AINPYATLHKTQRCAVKLTDVLGRGAFDLDRI---LELEPAFLEEDDHHHHHDHEHGPDC 233
Query: 179 -------------------------HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLI 213
H H HD + S+++ S+ LD + WL+ L+
Sbjct: 234 GCGEHGHDHGHHDHHHDHGHDHHHGHGMKHYHDEEMQSLSLRSDKPLDPTKFMPWLQELV 293
Query: 214 EEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDET 273
E G + R KGIL+ + +YVFQGVH L+G + W PDEKR +++VFIGR L E
Sbjct: 294 AEDGAKILRSKGILAFKDDDDRYVFQGVHMMLEGDHQRKWKPDEKRESRVVFIGRELPEQ 353
Query: 274 ALRKGFKGCLA 284
+R+GF +A
Sbjct: 354 RIREGFAKTIA 364
>gi|383774564|ref|YP_005453631.1| hypothetical protein S23_63320 [Bradyrhizobium sp. S23321]
gi|381362689|dbj|BAL79519.1| hypothetical protein S23_63320 [Bradyrhizobium sp. S23321]
Length = 347
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 175/290 (60%), Gaps = 16/290 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L K+K G+FD I++ETTGLA PAPV +TF DE V + +
Sbjct: 64 MNNGCICCTVRGDLVRIMDGLMKRK-GKFDAIIVETTGLADPAPVAQTFFVDEDVQKNAR 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLVT+ EL + RI+
Sbjct: 123 LDAVVTVADAKWLSDRLKDAP------EAKNQIAFADVIVLNKTDLVTKAELAEVEARIR 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + + SV + VL G +DL+RI E+ D H+H+ H HH +HH
Sbjct: 177 AINPYAKLHRTERCSVALADVLDRGAFDLDRI-LEIEPDFLEADDHNHDHDHDHHGHNHH 235
Query: 182 --------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSE 233
H HD + S+++ S+ LD + WL+ L++ +G + R KGIL+ +
Sbjct: 236 HHDHGHGLKHYHDEDMQSLSLKSDKPLDPNVFMPWLQNLVQVEGGKILRSKGILAFHDDD 295
Query: 234 QQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+YVFQGVH L+G + W DE R ++LVFIGR L E +RKGF+ C+
Sbjct: 296 DRYVFQGVHMMLEGDHQRKWKDDEPRQSRLVFIGRELPEDLIRKGFESCI 345
>gi|75674952|ref|YP_317373.1| cobalamin synthesis protein CobW [Nitrobacter winogradskyi Nb-255]
gi|74419822|gb|ABA04021.1| Cobalamin synthesis protein, CobW [Nitrobacter winogradskyi Nb-255]
Length = 353
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 174/300 (58%), Gaps = 24/300 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K+ G+FD I++ETTGLA PAPV +TF DE V + K
Sbjct: 61 MNNGCICCTVRGDLMRILADLMKR-NGKFDAIIVETTGLADPAPVAQTFFVDENVGKKTK 119
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I++NK DLV+ EL + RI+
Sbjct: 120 LDAVVTVTDAKWLNDRLKDAP------EAKNQIAFADVILINKTDLVSPEELSEIEARIR 173
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-DSEVHVDNSHCATHHHESAHGHHEGHH 180
IN A + + + + +L +DL+RI D E H H HGH H
Sbjct: 174 GINPYAKLHRTQRAQIALSEILERNAFDLDRILDIEPAFLERKDHDHDHHHDHGHDHHHD 233
Query: 181 H----------------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMK 224
H H HD + S+++ ++ LD D+ W+E L++++G ++ R K
Sbjct: 234 HDHHDHDHKHDDHHGGVKHYHDEEMQSISLKTDKPLDADKFFPWVEDLVQKEGPNILRSK 293
Query: 225 GILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
GILS ++++VFQGVH LDG + W DEKR +++VFIGRNL E + +GF+GC+A
Sbjct: 294 GILSFKDEDRRFVFQGVHMILDGDHQRPWKDDEKRQSRIVFIGRNLPEQLITEGFEGCIA 353
>gi|217979147|ref|YP_002363294.1| cobalamin synthesis protein P47K [Methylocella silvestris BL2]
gi|217504523|gb|ACK51932.1| cobalamin synthesis protein P47K [Methylocella silvestris BL2]
Length = 358
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 168/305 (55%), Gaps = 29/305 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K+K G+FD I++ETTGLA PAPV +TF D V + +
Sbjct: 61 MNNGCICCTVRGDLIRIIEGLMKRK-GKFDAIIVETTGLADPAPVAQTFFVDADVREAAR 119
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K + L + EA Q+A+AD IILNKIDLV+ EL + RI+
Sbjct: 120 LDAVVTVADAKWLAERLKDAP------EAKSQIAFADVIILNKIDLVSAEELADVEARIR 173
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHHES 171
IN A + A+ +V ++ VL +DL+RI D E H
Sbjct: 174 AINPYARLHKAQNCAVSLEDVLNRNAFDLDRILEIEPQFLEADEEHDHHGHDHDHDHGHH 233
Query: 172 AHGHH------------EGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGED 219
HG GH H HD + SV + EG +D D+ W+ I+ +G
Sbjct: 234 DHGRKHEHHDHDDHHAKNGHGLKHYHDEEMQSVALTIEGDVDPDKFLPWINSYIQTEGAA 293
Query: 220 LYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
+ R KGI+++ +++VFQGVH LDG + W P E R ++LVFIGR+L E +R GF
Sbjct: 294 ILRSKGIIALKDEPKRFVFQGVHMILDGDLQQDWKPGETRRSRLVFIGRHLKEDEIRTGF 353
Query: 280 KGCLA 284
C A
Sbjct: 354 LACAA 358
>gi|113869321|ref|YP_727810.1| G3E family GTPase [Ralstonia eutropha H16]
gi|113528097|emb|CAJ94442.1| Putative GTPase (G3E family) [Ralstonia eutropha H16]
Length = 362
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 175/299 (58%), Gaps = 27/299 (9%)
Query: 2 VNNGCLCCTV--RGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+ NGC+CC V R DLV++L +L ++ + +FDHI++ET+GLA P PV TF D V++
Sbjct: 68 MTNGCICCVVDVRTDLVRILQKLLEQPE-RFDHILVETSGLADPTPVAATFFMDNEVAKQ 126
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
V LDG++TLVD+ H HL++ + N+AV+Q+ ADR+ILNK DLV +L L R
Sbjct: 127 VTLDGILTLVDAVHIESHLDDPQLTGFDNQAVDQIVAADRVILNKTDLVNAAQLDRLEAR 186
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERID---------------SEVHVDNSHC 164
I +N A + + + VD+ +LG+GG+ I HV + HC
Sbjct: 187 IHRLNEGAQILRSNFAQVDLGKILGIGGFTTGTIQADAHADHHEHAHDHDHHDHVCDEHC 246
Query: 165 ATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMK 224
H + AHGH HD +V+SV++V + D ++ L+ L+ +G+D++RMK
Sbjct: 247 DHVHDDDAHGHR--------HDPSVTSVSLVFDQPFDRQRLEHGLKALLAAQGDDVFRMK 298
Query: 225 GILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
GI++V G +++YV Q VH +D P AWG + + +K VFIGR+LD+ L+ + CL
Sbjct: 299 GIVAVEGDDRRYVLQAVHRLMDFHPADAWGAEAAQ-SKFVFIGRHLDKLRLQTLLRVCL 356
>gi|395790664|ref|ZP_10470124.1| hypothetical protein MEC_00115 [Bartonella alsatica IBS 382]
gi|395409416|gb|EJF76006.1| hypothetical protein MEC_00115 [Bartonella alsatica IBS 382]
Length = 342
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 176/283 (62%), Gaps = 10/283 (3%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L ++ +FD I+IETTGLA P PV +TF D+ + +
Sbjct: 67 MNNGCVCCTVRGDLIRILESLLQRSH-RFDAIIIETTGLADPTPVAQTFFMDDSIHEKTA 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD +I +VD+KH L + + EA EQ+A++D ++LNKIDLV+ E + I
Sbjct: 126 LDSIIAVVDAKHFSLQLKKSR------EAEEQIAFSDIVLLNKIDLVSAEERAHVESLIL 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-DSEVH-VDNSHCATHHHESAHGHHEGH 179
IN A + ++ ++ +D +L G +DL+R+ D++ H +D+ H + + H+ H
Sbjct: 180 AINPGAIIYATEHANISLDKLLDRGSFDLQRVLDNDPHFLDHQHLGHVCGPTCNHDHKYH 239
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
H + +HD ++SV++ + G L ++ W++++ +++G D+ R+KGI++ G +YV Q
Sbjct: 240 HTSAIHDITITSVSLKT-GALKPEKFFPWIQQVTQQQGPDILRLKGIIAFQGDNDRYVIQ 298
Query: 240 GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
G+H L+G + W DEKR ++LVFIGR LD L+ F+ C
Sbjct: 299 GIHMILEGQHQRPWHEDEKRESRLVFIGRTLDSEKLKTSFENC 341
>gi|427817925|ref|ZP_18984988.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|410568925|emb|CCN16996.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
Length = 342
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 113/283 (39%), Positives = 172/283 (60%), Gaps = 9/283 (3%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+ +L +L ++ G+FD IV+ETTG+A PAPV++TF DE V + +
Sbjct: 64 MNNGCICCTVRGDLIGILHKLLRRP-GRFDAIVVETTGVADPAPVVQTFMMDEEVREKTE 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VIT+VD+KH L + + EA +Q+ YAD +++NK+DLV++ E + R+
Sbjct: 123 LDAVITMVDAKHFPLRLADSQ------EAEDQIVYADVVLINKMDLVSDGEADQVQRRVA 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN A + +D+ +L +G +DL+R ++ E + C H H G
Sbjct: 177 AINPYAACHRVQRAEIDLARILSIGAFDLQRCVELEARAAPAGCGHEHEHEHDEHCHGGT 236
Query: 181 HNHMHDSAVSSVTI-VSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
+H H +S +++ + G LD W+ L+E++G D+ RMKGIL++ ++Y+ Q
Sbjct: 237 DHHHHHHEISVMSVSLQAGALDGRRFFPWIHSLVEKQGPDILRMKGILALDDDARRYIIQ 296
Query: 240 GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
GVH ++G +AW DE R +KLVFIGR LD ALR GF+ C
Sbjct: 297 GVHMIVEGEHQRAWRDDEPRASKLVFIGRGLDAQALRAGFEAC 339
>gi|295691180|ref|YP_003594873.1| cobalamin synthesis protein P47K [Caulobacter segnis ATCC 21756]
gi|295433083|gb|ADG12255.1| cobalamin synthesis protein P47K [Caulobacter segnis ATCC 21756]
Length = 367
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 122/310 (39%), Positives = 179/310 (57%), Gaps = 37/310 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K+K G FD I++ETTGLA P PV +TF DE V
Sbjct: 68 MNNGCVCCTVRGDLIRVLQGLMKRKGG-FDAIIVETTGLADPGPVAQTFFVDEDVKARTA 126
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V +VD+KH + L++ K EAVEQ+A+AD+I+LNK DLV+E +L + RI+
Sbjct: 127 LDSVTAVVDAKHILLRLSDSK------EAVEQIAFADQIVLNKTDLVSEDDLRHVEARIR 180
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAH-------- 173
IN +AP+ A+ +V ++ +LG +DL+RI +E+ D + A H E H
Sbjct: 181 RINPLAPIHRAQRSNVPLEAILGKHSFDLDRI-TELEPDFLNPA--HGEPGHVHDEHCGH 237
Query: 174 -------------------GHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIE 214
HH H + +HD V V++ + +D ++ WL L+
Sbjct: 238 DHHHHHDHDHVHDEHCGHDHHHHHDHASDIHDDGVKGVSLTLDKPVDGQKITAWLNDLLA 297
Query: 215 EKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETA 274
++G D+ R KGI+ V G ++ VFQ VH L+G + W +KR +++VFIGR+LDE
Sbjct: 298 KRGPDILRAKGIIDVKGENKRLVFQAVHMILEGDFQREWTDKDKRYSRMVFIGRDLDEAE 357
Query: 275 LRKGFKGCLA 284
LR GF+ A
Sbjct: 358 LRAGFEATAA 367
>gi|58040050|ref|YP_192014.1| hypothetical protein GOX1617 [Gluconobacter oxydans 621H]
gi|58002464|gb|AAW61358.1| Hypothetical protein GOX1617 [Gluconobacter oxydans 621H]
Length = 336
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 169/283 (59%), Gaps = 24/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L +++ +FD I++ETTGLA PAPV +TF DE + + +
Sbjct: 77 MNNGCICCTVRGDLIRILGSLLRRRN-RFDGIIVETTGLADPAPVAQTFFVDENLREKAR 135
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+ + M+ L+E EAV Q+A+AD I+LNK+DL E + R++
Sbjct: 136 LDAVVTVVDAFNVMETLDESP------EAVNQIAFADVIVLNKVDLADEERRKEIVARLR 189
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
INA+A + A++G V++ +L GG+DL T ++ E HH
Sbjct: 190 KINAVAQIHEAQHGGVNLTDILDRGGFDL---------------TRALKTMPDFLENEHH 234
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+ H+ ++S+++ + +D W+ +++E+G D+ R KGIL G + ++ FQ V
Sbjct: 235 S--HEEGITSISLSIKDLIDQRRFQAWIGAILQEQGADILRAKGILHFKGEKDRFAFQAV 292
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG + E R ++LVFIGRNL+ LR+GF+ C+A
Sbjct: 293 HMMADGDFIGPFREGESRESRLVFIGRNLNRPQLRRGFESCIA 335
>gi|148253775|ref|YP_001238360.1| CobW protein involved in cobalamin synthesis [Bradyrhizobium sp.
BTAi1]
gi|146405948|gb|ABQ34454.1| putative CobW protein involved in cobalamin synthesis
[Bradyrhizobium sp. BTAi1]
Length = 326
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 169/281 (60%), Gaps = 23/281 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K++ G+FD I++ETTGLA PAPV +TF DE V + +
Sbjct: 64 MNNGCICCTVRGDLIRILQGLMKRR-GKFDGIIVETTGLADPAPVAQTFLVDEDVRRDTR 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T++D++H + ++ + EA EQ+A+AD ++LNK DL +E EL ++ RI+
Sbjct: 123 LDAIVTVIDARHLLGDIDRAQ------EAQEQIAFADVVLLNKTDLASEAELDTIEARIR 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + + ++D++ +L +DL+R+ + + H
Sbjct: 177 LINPYATLHRTQRCALDLEQILDRHAFDLDRV----------------LAFEPNFLAEDH 220
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+H HDS V S+++ +E L ++ W+++ ++ G D+ R+KGIL ++V QG+
Sbjct: 221 DHEHDSHVKSLSLTTEIPLVPEKFFPWIQQTVQLFGTDILRLKGILHFRDDPDRFVVQGI 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
H L+G + W P E R ++LVFIGR+L E LR GF C
Sbjct: 281 HMLLEGDHQRPWKPGEPRSSRLVFIGRDLPEEILRDGFGRC 321
>gi|433773802|ref|YP_007304269.1| putative GTPase, G3E family [Mesorhizobium australicum WSM2073]
gi|433665817|gb|AGB44893.1| putative GTPase, G3E family [Mesorhizobium australicum WSM2073]
Length = 375
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 116/309 (37%), Positives = 170/309 (55%), Gaps = 28/309 (9%)
Query: 2 VNNGCLCC--TVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+ NGC+CC VR DL+ ++ +L K +FDHI++ET+GLA P PV F D V++
Sbjct: 68 MQNGCICCFVDVRNDLIDVMKKLLSHKD-KFDHIIVETSGLADPTPVATAFFVDRSVAEE 126
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
V+LD V+TLVD+ H QHL + N+AV Q+ ADRI++NKIDL +E LGSL
Sbjct: 127 VELDAVVTLVDAMHIDQHLYDPVLDGSDNQAVNQIVAADRILVNKIDLASEEALGSLEGS 186
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHV----------------DNSH 163
++ +N AP+ + YG VD+ +LGV G+ + + H
Sbjct: 187 LRKLNQTAPILRSTYGKVDLSNILGVNGFRPSYVRERAEILDIDMDDDHDAHGDHHHECH 246
Query: 164 CAT-----HHHESAHGHHEGHH---HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEE 215
AT H HE HGH H HD+ V S + V + D +++ +L+ + E
Sbjct: 247 GATCDHPDHDHERDHGHDHAPASGLRPHQHDATVKSHSFVYPQSFDGEKLAGFLKDYLSE 306
Query: 216 KGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETAL 275
G+D++R KGI+SV+ E+ +V Q VH +D P +WG D+ R +K VFIGRNLD +
Sbjct: 307 YGDDIFRTKGIVSVANDERFFVLQAVHKLVDFRPDHSWG-DDTRKSKFVFIGRNLDRDGI 365
Query: 276 RKGFKGCLA 284
+ + CLA
Sbjct: 366 DRNLRACLA 374
>gi|326427135|gb|EGD72705.1| COBW domain-containing protein 6 [Salpingoeca sp. ATCC 50818]
Length = 370
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 163/289 (56%), Gaps = 34/289 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ VK + + KKK G FD++V+ETTGLA P P+ F D+ + VK
Sbjct: 98 LRNGCLCCSVKDVGVKAIENMMKKK-GLFDYVVLETTGLADPGPIASMFWLDDALCSDVK 156
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG++T++DSK+ ++ L E + +NEAV QVA ADRI+LNK+DL EL L I+
Sbjct: 157 LDGIVTVIDSKYGLKQLGEERSDGSLNEAVRQVALADRIVLNKVDLAKSQELAELKASIQ 216
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD----LERIDSEVHVDNSHCATHHHESAHGHHE 177
IN+ A + Y VD+ FVLG+ YD LE + ++ H
Sbjct: 217 AINSTALIVETNYSKVDLSFVLGIDAYDADERLEDLKAQAVTSTPHL------------- 263
Query: 178 GHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK-------GEDLYRMKGILSVS 230
DS+V +VTI G +D +E + W++ L+ E+ G ++ RMKG+LS+
Sbjct: 264 --------DSSVRTVTIALPGCVDEEEAERWIQDLLWEQQLDDKPCGAEVLRMKGVLSIR 315
Query: 231 GSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
GS+ +++ Q V D WG D +R+N+LVFIGRNL E LR F
Sbjct: 316 GSDNRHILQAVRELYDKTETTEWG-DAERVNRLVFIGRNLPEEDLRASF 363
>gi|395760629|ref|ZP_10441298.1| putative GTPases (G3E family) protein [Janthinobacterium lividum
PAMC 25724]
Length = 373
Score = 203 bits (517), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 175/321 (54%), Gaps = 48/321 (14%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCTVRGDL+ L +LA+K+ FD +VIETTGLA P PV +TF DE V
Sbjct: 61 MNNGCICCTVRGDLIVGLTELARKRDAGLLAFDRVVIETTGLANPGPVAQTFFVDEEVGS 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+ LD +IT+VD++HAM+ L+E + EA QV +AD+++L+K DLV E ++ +LT
Sbjct: 121 HYMLDAIITVVDARHAMKQLDEYE------EAQRQVGFADKLLLSKTDLVIEADVATLTR 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCAT-----HHHESAH 173
R+K IN AP+ +G + VL + G++L + ++ +D AT H H+ AH
Sbjct: 175 RLKRINPRAPIAKVDFGRAPLAEVLDIRGFNL---NEKLELDPDFLATETAHVHDHDKAH 231
Query: 174 -----GHHEGH--------------------------HHNHMHDSAVSSVTIVSEGTLDL 202
H GH HH+ H +++ S D
Sbjct: 232 EHANKAHEHGHVHTDEHAHEHQHEHTAACATDCGHANHHHAQHSDDIAAFVFKSTQPFDS 291
Query: 203 DEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINK 262
++D++L L++ G + R KG+L + G+E++ VFQGVH + G WG E R +K
Sbjct: 292 AKLDEFLGGLVQVYGPRMLRYKGVLLMQGAERKVVFQGVHQLMGSDLGAKWGEHEVRGSK 351
Query: 263 LVFIGRNLDETALRKGFKGCL 283
+VFIG+NL + +G + CL
Sbjct: 352 MVFIGKNLPKDIFIRGLEQCL 372
>gi|402771093|ref|YP_006590630.1| Cobalamin synthesis protein P47K [Methylocystis sp. SC2]
gi|401773113|emb|CCJ05979.1| Cobalamin synthesis protein P47K [Methylocystis sp. SC2]
Length = 384
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 116/316 (36%), Positives = 171/316 (54%), Gaps = 44/316 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L +++ G+FD I++ETTGLA PAPV +TF D V + +
Sbjct: 61 MNNGCICCTVRGDLIRIIEGLMRRR-GKFDAIIVETTGLANPAPVAQTFFMDADVKEAAR 119
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K + L + EA Q+A+AD I+LNK DLV++ EL + RI+
Sbjct: 120 LDAVVTVADAKWLSERLKDAP------EAKSQIAFADVIVLNKTDLVSDEELADVEGRIR 173
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-DSEVHVDNSHCATHHHESAH------- 173
IN A + A V + VL +DL+RI + E ++ ++H H+ H
Sbjct: 174 AINPYAALHRAVRSGVPLQAVLERNAFDLDRILEIEPAFLDAEESSHDHDDVHECGPDCG 233
Query: 174 ------------------------GHHEGHHH-----NHMHDSAVSSVTIVSEGTLDLDE 204
HE HH H HD + SV+I +G +D +
Sbjct: 234 HDHHEHDHPDHDHDHDHDHGHAHEHKHENHHAPRAGMQHFHDDEMHSVSIRHDGPVDPER 293
Query: 205 VDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLV 264
WL LI+ G D+ R KGI++ +++VFQGVH LDG + W EKR ++LV
Sbjct: 294 FVPWLNELIQRDGPDILRSKGIIAFRDEPRRFVFQGVHQILDGDLQREWKEGEKRESRLV 353
Query: 265 FIGRNLDETALRKGFK 280
FIGR L E +R+GF+
Sbjct: 354 FIGRKLKEQEIREGFE 369
>gi|395793035|ref|ZP_10472444.1| hypothetical protein MEI_01065 [Bartonella vinsonii subsp.
arupensis Pm136co]
gi|395431873|gb|EJF97879.1| hypothetical protein MEI_01065 [Bartonella vinsonii subsp.
arupensis Pm136co]
Length = 342
Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 107/283 (37%), Positives = 175/283 (61%), Gaps = 10/283 (3%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L ++ +FD I+IETTGLA P PV +TF D+ V +
Sbjct: 67 MNNGCVCCTVRGDLIRILESLMQRSH-RFDAIIIETTGLADPIPVAQTFFMDDTVHEKTA 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI +VD+KH L + EA +Q+A++D ++LNKIDLV E + I
Sbjct: 126 LDSVIAVVDAKHLPSQLKNSR------EAEDQIAFSDIVLLNKIDLVNAQERAHVESLIL 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-DSEVH-VDNSHCATHHHESAHGHHEGH 179
IN A + + ++ ++ +L +G +DL+RI +++ H +D+ H + H+ H
Sbjct: 180 AINPRAVLYTTERANIPLEKLLNLGSFDLQRILENDPHFLDHQHADHVCGPDCNHDHQHH 239
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
H + +HD V+SV++ + G L ++ WL+++ +++G ++ R+KGI++ G +YV Q
Sbjct: 240 HTSPIHDITVTSVSLKT-GALQPEKFFPWLQQITQQQGPNILRLKGIIAFQGDNDRYVIQ 298
Query: 240 GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
G+H L+G + W +EKR ++LVFIGR+LD L+ GF+ C
Sbjct: 299 GIHMMLEGQHQRPWREEEKRESRLVFIGRSLDAEKLKTGFENC 341
>gi|134096117|ref|YP_001101192.1| hypothetical protein HEAR2959 [Herminiimonas arsenicoxydans]
gi|133740020|emb|CAL63071.1| Putative cobalamin synthesis protein [Herminiimonas arsenicoxydans]
Length = 349
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/297 (38%), Positives = 172/297 (57%), Gaps = 24/297 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCTVRGDL+ L LA++++ QFDH+VIETTGLA P PV +TF DE V+
Sbjct: 61 MNNGCICCTVRGDLIVALTALAQRRRDGELQFDHVVIETTGLANPGPVAQTFFIDEEVAI 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+D +IT+VD+KHAM L+ + EA Q+ +AD+++L+K DLV+ EL L E
Sbjct: 121 DYLVDAIITVVDAKHAMHQLDTYE------EAQRQIGFADKLLLSKTDLVSADELAILIE 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
RIK IN APV A +G V + VL + G++L + ++ +D A HE A H
Sbjct: 175 RIKRINPRAPVSTADFGRVAIADVLDLRGFNL---NDKLELDPDFIAAQEHEHAQHDHAC 231
Query: 179 HHH------------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGI 226
H + H +++ SE + +++D++L +++ G + R KG+
Sbjct: 232 ETHCTQDHEHTHDHHHSHHSDNIAAFVFKSERPFNTEKLDEFLGSIVQVFGPRMLRYKGV 291
Query: 227 LSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
L + G++++ VFQGVH + G WG +E R +K+VFIG+NL + G + CL
Sbjct: 292 LWMDGADRKVVFQGVHQIMGSDIGGKWGENESRSSKMVFIGQNLPKETFILGLEQCL 348
>gi|304393375|ref|ZP_07375303.1| cobw domain-containing protein 1 [Ahrensia sp. R2A130]
gi|303294382|gb|EFL88754.1| cobw domain-containing protein 1 [Ahrensia sp. R2A130]
Length = 356
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/299 (37%), Positives = 169/299 (56%), Gaps = 31/299 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L ++K G+FD I++ETTGLA PAPV +TF DE V +
Sbjct: 63 MNNGCVCCTVRGDLVRVVQNLLRRK-GRFDGIIVETTGLADPAPVAQTFFMDEDVRAKAR 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVDS+H Q L + EA +QVA+AD ++LNK DLV E E+ L ++
Sbjct: 122 LDAVVALVDSRHFPQTLKDAP------EAEDQVAFADVVVLNKTDLVDEAEIEKLRATVR 175
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE---- 177
IN A + A+ V +D VL G +DL+RI ++N H ++ H HE
Sbjct: 176 SINPHAVIHTAERSEVALDVVLDRGAFDLDRI-----LENDPHFLHANDHDHADHECSPA 230
Query: 178 --------------GHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRM 223
HD++V+S+++ G L+ W+ +L + G D+ R+
Sbjct: 231 CDHHGHDHGHNHDHAKLDGSTHDTSVTSISLRG-GELNHTLFFPWINKLTQVDGADILRL 289
Query: 224 KGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
KGI++ + +YV QGVH ++G + W DE R +++VFIGRNLD + + F+ C
Sbjct: 290 KGIVAFADDADRYVVQGVHMIVEGDHQRPWRDDEPRESRMVFIGRNLDREKIERSFRAC 348
>gi|319945232|ref|ZP_08019494.1| CobW/P47K family protein [Lautropia mirabilis ATCC 51599]
gi|319741802|gb|EFV94227.1| CobW/P47K family protein [Lautropia mirabilis ATCC 51599]
Length = 324
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/286 (39%), Positives = 166/286 (58%), Gaps = 26/286 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCTVRGDLV++LL L A++ G+ FD +VIETTGLA P PV +TF D+ V+Q
Sbjct: 62 MNNGCICCTVRGDLVRILLDLKARRDAGEIHFDRVVIETTGLADPGPVAQTFFMDDEVAQ 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD +IT+VD+ H Q L+E K EA QV +ADRI+++K DL E + +L
Sbjct: 122 SYMLDAIITVVDALHGNQQLDETK------EAQAQVGFADRILISKTDLANEETVEALRR 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ +N A ++ ++G+VD+ VL + G++L + + VD + H
Sbjct: 176 RLVQMNPRAQIRTIQFGNVDVAEVLDIKGFNLNAV---LEVDPDFLESDEH--------- 223
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H AVSS S+ D +++++L +I+ G DL R KG+L + G+ ++ VF
Sbjct: 224 -----THSDAVSSFVFKSKKPFDGTKLEEFLGGMIQVFGPDLLRYKGVLYIKGTPRRMVF 278
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QGVH + G+ W P E +K+VFIGRNL + G K CLA
Sbjct: 279 QGVHMMMGADVGRKWEPHETPSSKMVFIGRNLPKDTFIAGLKQCLA 324
>gi|16124576|ref|NP_419140.1| hypothetical protein CC_0321 [Caulobacter crescentus CB15]
gi|221233262|ref|YP_002515698.1| low-affinity zinc transport protein [Caulobacter crescentus NA1000]
gi|13421466|gb|AAK22308.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220962434|gb|ACL93790.1| low-affinity zinc transport protein [Caulobacter crescentus NA1000]
Length = 365
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/309 (39%), Positives = 179/309 (57%), Gaps = 36/309 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K+K G FD I++ETTGLA P PV +TF D+ V
Sbjct: 67 MNNGCVCCTVRGDLIRVLQGLMKRKGG-FDAIIVETTGLADPGPVAQTFFVDDDVKARTA 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V +VD+KH + L++ K EAVEQ+A+AD+I+LNK DLV+E +L + RI+
Sbjct: 126 LDSVTAVVDAKHILLRLSDSK------EAVEQIAFADQIVLNKTDLVSEDDLRHVEARIR 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN +AP+ A+ +V +D +LG +DLERI +++ D + A H E H H E H
Sbjct: 180 RINPLAPIHRAQRSNVPLDAILGKHSFDLERI-TDLEPDFLNPA--HGEPGHVHDEHCDH 236
Query: 182 NHMHDS--------------------------AVSSVTIVSEGTLDLDEVDDWLERLIEE 215
+H HD V +++ + +D ++ WL L+
Sbjct: 237 HHHHDHDHVHDEHCGHDHHHHHHDHKSDVHDDGVKGISLTLDKPVDGQKITAWLNDLLAR 296
Query: 216 KGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETAL 275
+G D+ R KGI+ V G +++ VFQ VH L+G + W +KR +++VFIGR+LDE L
Sbjct: 297 RGPDILRAKGIIDVKGEDKRLVFQAVHMILEGDFQRPWTDKDKRYSRMVFIGRDLDEAEL 356
Query: 276 RKGFKGCLA 284
R GF+ A
Sbjct: 357 RAGFEATAA 365
>gi|148260307|ref|YP_001234434.1| cobalamin synthesis protein, P47K [Acidiphilium cryptum JF-5]
gi|326403497|ref|YP_004283579.1| putative cobalamin synthesis protein [Acidiphilium multivorum
AIU301]
gi|338983261|ref|ZP_08632476.1| Cobalamin synthesis protein, P47K [Acidiphilium sp. PM]
gi|146401988|gb|ABQ30515.1| cobalamin synthesis protein, P47K [Acidiphilium cryptum JF-5]
gi|325050359|dbj|BAJ80697.1| putative cobalamin synthesis protein [Acidiphilium multivorum
AIU301]
gi|338207815|gb|EGO95737.1| Cobalamin synthesis protein, P47K [Acidiphilium sp. PM]
Length = 320
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 107/283 (37%), Positives = 168/283 (59%), Gaps = 24/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ +FD I++ETTGLA PAPV +TF DE V +
Sbjct: 61 MNNGCICCTVRGDLIRIIGGLMKRRN-RFDGIIVETTGLANPAPVAQTFFVDEDVKAKTR 119
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD+K+ L + EA +Q+A+AD I+LNK+DLVT EL + RI+
Sbjct: 120 LDAIVTVVDAKNLPARLADAP------EAEDQIAFADVIVLNKLDLVTPEELADVEARIR 173
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + V D +LG+ + L+R+ V E +H H E
Sbjct: 174 TINRFAQIHHTTRADVPADRLLGINAFSLDRVLQSV-------PDFLEEDSHTHDE---- 222
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HM SS+++ + LD + + W+ ++ +G+D+ R KGIL+ +G ++++ FQ V
Sbjct: 223 -HM-----SSISLSVKKPLDPELFNAWIGGILATQGQDILRTKGILAFAGEDRRFAFQAV 276
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG + W E+R +++VFIGR+L+ LR+GF+ C+A
Sbjct: 277 HMMADGDFIRPWKDGEERESRIVFIGRDLNRPMLRRGFESCIA 319
>gi|90426302|ref|YP_534672.1| cobalamin synthesis protein, P47K [Rhodopseudomonas palustris
BisB18]
gi|90108316|gb|ABD90353.1| cobalamin synthesis protein, P47K [Rhodopseudomonas palustris
BisB18]
Length = 350
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 171/292 (58%), Gaps = 16/292 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV++L L K+K G+FD I++ETTGLA PAPV +TF DE V +
Sbjct: 65 MNNGCICCTVRGDLVRILGGLMKRK-GKFDAIIVETTGLADPAPVAQTFFVDEDVMASSR 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K + L + EA Q+A+AD I+LNK DLV++ EL + RI+
Sbjct: 124 LDAVVTVADAKWLSERLKDAP------EAKNQIAFADVIVLNKTDLVSKAELAEVEARIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI---------DSEVHVDNSHCATHHHESA 172
IN A + + V + VL G +DL+RI + H + H HH +
Sbjct: 178 AINPYAKLHRTERCQVALADVLERGAFDLDRILEIEPQFLEAGDDHDHDHHDHDQHHHAH 237
Query: 173 HGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGS 232
H H HD + S+ + S+ +D + WL++LI +G + R KGILS +G
Sbjct: 238 DHGHNHGGLKHYHDEDMQSLALKSDKPVDPAKFMPWLQQLIAAEGGKILRSKGILSFTGD 297
Query: 233 EQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+ +YVFQGVH L+G +AW E R ++LVFIGR+L E +R GF+ C+A
Sbjct: 298 DDRYVFQGVHMMLEGDHQRAWKDGEARQSRLVFIGRDLPEQVIRDGFEQCIA 349
>gi|423714420|ref|ZP_17688677.1| hypothetical protein ME1_01404 [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395420282|gb|EJF86566.1| hypothetical protein ME1_01404 [Bartonella vinsonii subsp.
arupensis OK-94-513]
Length = 342
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 175/283 (61%), Gaps = 10/283 (3%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L ++ +FD I+IETTGLA P PV +TF D+ V +
Sbjct: 67 MNNGCVCCTVRGDLIRILESLMQRSH-RFDAIIIETTGLADPIPVAQTFFMDDTVHEKTA 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI +VD+KH L + EA +Q+A++D ++LNKIDLV E + I
Sbjct: 126 LDSVIAVVDAKHLPSQLKNSR------EAEDQIAFSDIVLLNKIDLVNAQERAHVESLIL 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVH-VDNSHCATHHHESAHGHHEGH 179
IN A + + ++ ++ +L +G +DL+R ++++ H +D+ H + H+ H
Sbjct: 180 AINPRAVLYTTERANIPLEKLLNLGSFDLQRTLENDPHFLDHQHADHVCGPDCNHDHQHH 239
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
H + +HD V+SV++ + G L ++ WL+++ +++G ++ R+KGI++ G +YV Q
Sbjct: 240 HTSPIHDITVTSVSLKT-GALQPEKFFPWLQQITQQQGPNILRLKGIIAFQGDNDRYVIQ 298
Query: 240 GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
G+H L+G + W +EKR ++LVFIGR+LD L+ GF+ C
Sbjct: 299 GIHMMLEGQHQRPWREEEKRESRLVFIGRSLDAEKLKTGFENC 341
>gi|365859646|ref|ZP_09399500.1| CobW/P47K family protein [Acetobacteraceae bacterium AT-5844]
gi|363711839|gb|EHL95546.1| CobW/P47K family protein [Acetobacteraceae bacterium AT-5844]
Length = 328
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/283 (39%), Positives = 167/283 (59%), Gaps = 23/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV++L L K++Q +FD I++ETTGLA PAPV +TF DE V + +
Sbjct: 64 MNNGCICCTVRGDLVRILSSLMKRRQ-KFDGIIVETTGLADPAPVAQTFYMDEDVKRATR 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++TLVD+K+ L++ K EA Q+A+AD ++LNK+DLVTE E + RI+
Sbjct: 123 LDAIVTLVDAKNLAARLDDSK------EAASQIAFADIVVLNKMDLVTEEEAAEVERRIR 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A ++ A V ++ V+G + LERI E G
Sbjct: 177 AINPYAEIRRATKSEVPIEAVMGREAFKLERI-----------LEREPEFLSGED----- 220
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
NH H+ + S++ + LD + + W+ L++ KG+DL R KG+L+ G + ++ FQ V
Sbjct: 221 NHSHNEDIMSLSFEVDQPLDEGKFNQWIGELLQVKGQDLLRTKGVLAFEGQDDRFAFQAV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG W R +K+VFIGR+L+ LR+GF+GC+A
Sbjct: 281 HMIADGDYIGPWPEGAARKSKIVFIGRDLNRPRLRRGFEGCIA 323
>gi|299132179|ref|ZP_07025374.1| cobalamin synthesis protein P47K [Afipia sp. 1NLS2]
gi|298592316|gb|EFI52516.1| cobalamin synthesis protein P47K [Afipia sp. 1NLS2]
Length = 365
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/309 (40%), Positives = 176/309 (56%), Gaps = 33/309 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L K+K G+FD I++ETTGLA PAPV +TF DE VSQ
Sbjct: 64 MNNGCVCCTVRGDLVRIIDGLMKRK-GKFDAIILETTGLADPAPVAQTFFVDEEVSQKTA 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K + L + EA Q+A+AD I+LNK DLV + EL + RI+
Sbjct: 123 LDAVVTVADAKWLSERLKDAP------EAKNQIAFADVIVLNKTDLVNKDELAEVEGRIR 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI---DSEVHVDNSHCATHHHESAHGHHEG 178
IN A + + +V + VLG G +DL+RI + ++ H HHH+ HG G
Sbjct: 177 AINPYATLHKTQRCAVKLTDVLGRGAFDLDRILELEPAFLEEDEHDHHHHHDHEHGPDCG 236
Query: 179 -----------------------HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEE 215
H H HD + S+++ S+ LD + WL+ L+
Sbjct: 237 CGEHGDDHDHHGHHHHDHGHHHGHGMKHYHDEDMQSLSLRSDKPLDPMKFMPWLQELVAN 296
Query: 216 KGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETAL 275
G + R KGIL+ +G + +YVFQGVH L+G + W PDEKR +++VFIGR L E +
Sbjct: 297 DGAKILRSKGILAFAGDDDRYVFQGVHMMLEGDHQRKWKPDEKRESRVVFIGRELPEERI 356
Query: 276 RKGFKGCLA 284
R+GF +A
Sbjct: 357 REGFAKTIA 365
>gi|357632715|ref|ZP_09130593.1| cobalamin synthesis protein P47K [Desulfovibrio sp. FW1012B]
gi|357581269|gb|EHJ46602.1| cobalamin synthesis protein P47K [Desulfovibrio sp. FW1012B]
Length = 323
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 165/284 (58%), Gaps = 24/284 (8%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
++NNGC+CC+VRGDL+++L LA+++ G FD +++ETTGLA PA +I+TF DE
Sbjct: 59 LMNNGCVCCSVRGDLIRVLGGLARRR-GAFDGVLLETTGLADPAAIIQTFAMDEDTRDAF 117
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
LD V T+VD+ H H E + +A+EQV YAD +I+NK DLV + L +T +
Sbjct: 118 HLDTVTTVVDAVHFRGHAAENR------QALEQVVYADLVIVNKTDLVGQDVLDDITATV 171
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
K +NA A + A + + +L +D+ R+ G E H
Sbjct: 172 KRLNATAEIIPAVRCDLPLARILDRQAFDINRL-------------LFAHPGFGGQEPHE 218
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
H+H + S++ G LD +++ D+L L++E G+D+YR KGI+ V+G++Q+++FQG
Sbjct: 219 HDH----GIRSLSFTVAGPLDPEKLGDFLSTLLQEHGQDIYRSKGIMDVAGTKQRFIFQG 274
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
VH L+ G W +E+R ++ VFIGR LD L KG GC A
Sbjct: 275 VHMYLETAWGTPWKENEERTSRAVFIGRGLDRAMLEKGLAGCAA 318
>gi|209884053|ref|YP_002287910.1| cobalamin synthesis protein, P47K [Oligotropha carboxidovorans OM5]
gi|337742243|ref|YP_004633971.1| cobalamin biosynthesis CobW-like protein [Oligotropha
carboxidovorans OM5]
gi|386031208|ref|YP_005951983.1| putative cobalamin biosynthesis CobW-like protein [Oligotropha
carboxidovorans OM4]
gi|209872249|gb|ACI92045.1| cobalamin synthesis protein, P47K [Oligotropha carboxidovorans OM5]
gi|336096274|gb|AEI04100.1| putative cobalamin biosynthesis CobW-like protein [Oligotropha
carboxidovorans OM4]
gi|336099907|gb|AEI07730.1| putative cobalamin biosynthesis CobW-like protein [Oligotropha
carboxidovorans OM5]
Length = 368
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/308 (40%), Positives = 174/308 (56%), Gaps = 32/308 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L K+K G+FD I++ETTGLA PAPV +TF DE VS
Sbjct: 68 MNNGCVCCTVRGDLVRIIDGLMKRK-GKFDAIILETTGLADPAPVAQTFFVDEEVSGRTA 126
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K+ + L + EA Q+A+AD I+LNKIDLV++ EL + RI+
Sbjct: 127 LDAVVTVADAKYLSERLKDAP------EAKNQIAFADVIVLNKIDLVSKDELAEVEGRIR 180
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI--------------------DSEVHVDN 161
IN A + + +V + VLG G +DL+R+ H +
Sbjct: 181 AINPYATLHRTERCAVKLSDVLGRGAFDLDRVLDLEPAFLKDEGHDHHHHHDHDHEHGPD 240
Query: 162 SHCATHHHESAHGHHEGHHH-----NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK 216
C H H+ H HH H H HD + S+++ S+ LD + WL+ LI
Sbjct: 241 CGCGAHDHDHGHDHHHHDHDHGHGMKHYHDEDMQSLSLRSDKPLDPMKFMPWLQELIATD 300
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
G + R KGIL+ E +YVFQGVH L+G + W PDEKR +++VFIGR L E +R
Sbjct: 301 GAKILRSKGILAFKDDEDRYVFQGVHMMLEGDHQRKWKPDEKRESRVVFIGRELPEERIR 360
Query: 277 KGFKGCLA 284
+GF +A
Sbjct: 361 EGFAKTIA 368
>gi|377811107|ref|YP_005043547.1| cobalamin synthesis protein P47K [Burkholderia sp. YI23]
gi|357940468|gb|AET94024.1| cobalamin synthesis protein P47K [Burkholderia sp. YI23]
Length = 348
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/285 (41%), Positives = 172/285 (60%), Gaps = 13/285 (4%)
Query: 2 VNNGCLCC--TVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+ NGC+CC VR DLV+++ L ++ + + DHI++ET+GLA P PV +TF D+ ++Q
Sbjct: 70 MTNGCVCCVGAVREDLVRIVRMLVERPE-RLDHIIVETSGLADPYPVAQTFFIDDPIAQR 128
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
V LD V+T+VD+KH HL+++ N+AV+Q+ ADRII+NK+DLVT E+ SL ER
Sbjct: 129 VTLDAVVTMVDAKHIAAHLDDLVLDGRDNQAVDQIVCADRIIINKVDLVTSAEIASLKER 188
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGH 179
++ +NA A + + Y +D+ +LGVG + + EV + H H H+
Sbjct: 189 LRGLNATAEIVESSYAQIDLHRILGVGANEFAQQLVEVEEHHHHDHEHEHDHD------- 241
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
+H HD +VSSV I + +DLD + WL L L+RMKGI +V G +YV Q
Sbjct: 242 --DHHHDESVSSVGIEVDADIDLDALQTWLAELRTADATKLFRMKGIFAVKGQPYRYVLQ 299
Query: 240 GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
GVH ++ +AWG E R +++VFIGR LD AL + F CLA
Sbjct: 300 GVHDIIELKAAQAWG-SEPRSSRMVFIGRELDRAALNERFHTCLA 343
>gi|110774066|ref|XP_001122460.1| PREDICTED: COBW domain-containing protein 1-like [Apis mellifera]
Length = 292
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 176/290 (60%), Gaps = 15/290 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
++NGC+CCT+RGDLV++L +L ++ + +FD I+IETTGLA PAPV +TF DE + +
Sbjct: 9 LSNGCVCCTIRGDLVRILNKLIQRLR-RFDGIIIETTGLADPAPVAQTFFVDEDIRNKTR 67
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI ++D+ H M+ L+E K EAV Q+A+AD I+LNK+DLV L ++ +RI+
Sbjct: 68 LDAVIAVIDAFHVMKTLDESK------EAVNQIAFADVILLNKVDLVDRGSLIAIKKRIR 121
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER--------IDSEVHVDNSHCATHHHESAH 173
IN M + + G++ + +L +GG+DL R + S H + H
Sbjct: 122 TINPMVALYEMEKGNISLMKILDLGGFDLNRALTLEPKFLSSHDHDHDHDHDHDHDHDHD 181
Query: 174 GHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSE 233
H+ H H H V+S++++ + LD + W+ ++++ G+D+ R KGI++ +
Sbjct: 182 HDHDHDHVQHSHGDGVTSISLMEDKPLDGKRFNLWMSMVLQKFGKDILRTKGIMNFKHDD 241
Query: 234 QQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+ + FQ VH +G ++W +E R ++LVFIGRNLDE +LR+GF C+
Sbjct: 242 RCFAFQAVHMMAEGNFIRSWKTNEDRCSRLVFIGRNLDEKSLREGFFKCI 291
>gi|255080074|ref|XP_002503617.1| predicted protein [Micromonas sp. RCC299]
gi|226518884|gb|ACO64875.1| predicted protein [Micromonas sp. RCC299]
Length = 444
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/154 (59%), Positives = 127/154 (82%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
++NNGCLCC+VRGDLV ML +L +K+GQFDHI+IETTGLA PAP+I+TF + + +
Sbjct: 111 LLNNGCLCCSVRGDLVDMLGRLVTEKKGQFDHILIETTGLANPAPIIQTFYLEPDLLDTL 170
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
+LDGV+TLVD+KHAM HL+E KP VVNEA+EQVA+ADR++LNK DLV ++EL S+ R+
Sbjct: 171 RLDGVVTLVDAKHAMMHLDEKKPEGVVNEALEQVAFADRLVLNKTDLVNQSELLSIENRV 230
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERID 154
+ IN +A ++ A+ +VD+DFVLGVGG+DL+R++
Sbjct: 231 RTINNLASIQRAEKANVDLDFVLGVGGFDLDRVE 264
>gi|256015747|ref|YP_003105756.1| cobalamin synthesis protein/P47K family [Brucella microti CCM 4915]
gi|255998407|gb|ACU50094.1| cobalamin synthesis protein/P47K family [Brucella microti CCM 4915]
Length = 343
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 170/286 (59%), Gaps = 16/286 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V
Sbjct: 71 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRAKTG 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL ++ ++
Sbjct: 130 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPEELAAVEATVR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + + S+ +D VL G +DL+R+ +DN H + H H
Sbjct: 184 AINPHAIIHHTERASIPLDRVLDRGAFDLKRV-----LDNDPHFLDHDDPDHVCGPDCDH 238
Query: 182 NH---MHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+H +HD V SV++ + G +D + W++ + + +G ++ R+KGI++ +YV
Sbjct: 239 DHASPIHDVTVKSVSLRT-GEIDPAKFFPWIQNITQTQGPNILRLKGIIAFKDDPDRYVV 297
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QGVH ++G + W P+EK ++LVFIGR LD AL+ GF+ C A
Sbjct: 298 QGVHMIIEGDHQRTWKPEEKHESRLVFIGRELDPAALKAGFENCRA 343
>gi|451942425|ref|YP_007463062.1| cobalamin synthesis protein, P47K family [Bartonella vinsonii
subsp. berkhoffii str. Winnie]
gi|451901812|gb|AGF76274.1| cobalamin synthesis protein, P47K family [Bartonella vinsonii
subsp. berkhoffii str. Winnie]
Length = 342
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 173/283 (61%), Gaps = 10/283 (3%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L ++ +FD I+IETTGLA P PV +TF D+ V +
Sbjct: 67 MNNGCVCCTVRGDLIRILESLMQRSH-RFDAIIIETTGLADPIPVAQTFFMDDTVHEKTA 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI +VD+KH L + + EA +Q+A++D ++LNKIDLV E I
Sbjct: 126 LDSVIAVVDAKHLPSQLKKSR------EAEDQIAFSDIVLLNKIDLVNAQERAHAESLIL 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVH-VDNSHCATHHHESAHGHHEGH 179
IN A + + ++ ++ +L +G +DL+R ++++ H +D+ H H ++ H
Sbjct: 180 AINPRAVIYATERANIPLEKLLNLGSFDLQRTLENDPHFLDHQHADHVCGPDCHHDYQHH 239
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
H + +HD V+SV++ + G L ++ W++ + +++G D+ R+KGI++ G +YV Q
Sbjct: 240 HTSPIHDITVTSVSLKT-GALQPEKFFPWIQEVTQQQGPDILRLKGIIAFQGDNDRYVIQ 298
Query: 240 GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
G+H L+G + W +EKR ++LVFIG +LD LR GF+ C
Sbjct: 299 GIHMMLEGQHQRPWREEEKRESRLVFIGHSLDAKKLRTGFENC 341
>gi|154248628|ref|YP_001419586.1| cobalamin synthesis protein P47K [Xanthobacter autotrophicus Py2]
gi|154162713|gb|ABS69929.1| cobalamin synthesis protein P47K [Xanthobacter autotrophicus Py2]
Length = 355
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 165/298 (55%), Gaps = 22/298 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++K G FD I++ETTGLA PAPV +TF DE V +
Sbjct: 65 MNNGCICCTVRGDLIRVIDGLLRRKGG-FDGIIVETTGLADPAPVAQTFFVDEEVQAKTR 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA QVA+AD I+LNK DLVT EL + RI+
Sbjct: 124 LDAVVTVADAKWLSDRLKDAP------EAKNQVAFADVILLNKTDLVTGAELDQVEARIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + +D+ VL G +DL+RI HHH+ HG G H
Sbjct: 178 GINPYAKLYRTTKSEIDIAKVLNQGAFDLDRILELEPAFLEDDDHHHHDHEHGPDCGCDH 237
Query: 182 ---------------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGI 226
+HD V SV +E L+ D+ W++ L+ +G ++ R KGI
Sbjct: 238 DHGHDHAHDHHHHGLKAVHDDEVQSVAFSTEKELNPDKFFPWVQNLVATEGPNILRSKGI 297
Query: 227 LSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
LS + ++VFQGVH LDG + W DEKR++++VFIGR LD AL GF C A
Sbjct: 298 LSFANDPDRFVFQGVHMILDGDHQRPWKADEKRVSRIVFIGRKLDRKALEDGFLSCAA 355
>gi|347819953|ref|ZP_08873387.1| cobalamin synthesis protein P47K [Verminephrobacter aporrectodeae
subsp. tuberculatae At4]
Length = 356
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 177/306 (57%), Gaps = 33/306 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL--AKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVS 57
++NGC+CCT+R DL + LQL AKK++GQ FD IVIETTG+A P PV +TF DE ++
Sbjct: 61 MSNGCICCTIREDL-RATLQLLAAKKREGQLDFDRIVIETTGVADPGPVAQTFFMDEEIA 119
Query: 58 QYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLT 117
+D +ITLVD+KHA + L+E + EA QV +AD+I L+K DLV+ E +LT
Sbjct: 120 ATCLIDSIITLVDAKHAGRQLDERQ------EARRQVGFADQIFLSKTDLVSAQETDALT 173
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLER---IDSEV-------------HVDN 161
R+KH+N AP++ +G+V ++ VL + G++L ID + H
Sbjct: 174 HRLKHMNPRAPIRAVHFGAVALEEVLDLRGFNLNAKLDIDPDFLKEEAAHGHPGHDHAHG 233
Query: 162 SHC---ATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGE 218
+HC A H + HG HHH HD V S S+ D +++D+LE ++ G
Sbjct: 234 AHCDHPAHQHDQHDHGDQGRHHH---HDDDVKSFVYRSQRPFDPVKLEDFLEAIVNIYGP 290
Query: 219 DLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKG 278
+ R KG+L + G++++ +FQGVH + G W E+RI+K+VFIG +L ++G
Sbjct: 291 RMLRYKGVLHMRGTDRKVIFQGVHQLMGSDLGPPWADGEERISKMVFIGLDLPRDIFQQG 350
Query: 279 FKGCLA 284
+ LA
Sbjct: 351 LEQSLA 356
>gi|163868835|ref|YP_001610061.1| putative cobalamin synthesis protein [Bartonella tribocorum CIP
105476]
gi|161018508|emb|CAK02066.1| putative cobalamin synthesis protein [Bartonella tribocorum CIP
105476]
Length = 343
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 171/291 (58%), Gaps = 23/291 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L ++ +FD I+IETTGLA P PV +TF D+ V +
Sbjct: 65 MNNGCVCCTVRGDLIRILESLMQRSH-RFDAIIIETTGLADPIPVAQTFFMDDTVHEKTA 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI +VD+KH L + + E EQ+A+AD I+LNKIDLVT E I
Sbjct: 124 LDSVIAVVDAKHFPSQLKKSR------EVEEQIAFADIILLNKIDLVTAQERAHAESLIL 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHVDNSHCATHHHESAHGHH---- 176
IN A + + ++ +D +L G +DL+R +D E H H H HG H
Sbjct: 178 AINPRAILYTTQRTNIPLDKLLNCGFFDLQRALDHE-----PHFLDHEHTDQHGDHVCDP 232
Query: 177 -----EGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSG 231
HH + +HD V+S+++ + G L ++ W++++ +++G D+ R+KGI++ G
Sbjct: 233 DCHHDHHHHTSSIHDITVTSISLKT-GALQPEKFFPWIQQVTQQQGPDILRLKGIIAFQG 291
Query: 232 SEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
+ +YV QG+H L+G + W DEKR ++LVFIGR LD L+ GF+ C
Sbjct: 292 DDDRYVIQGIHMFLEGQHQRPWREDEKRESRLVFIGRCLDAEKLKTGFENC 342
>gi|365894249|ref|ZP_09432404.1| putative cobalamin synthesis protein/P47K family protein
[Bradyrhizobium sp. STM 3843]
gi|365425096|emb|CCE04946.1| putative cobalamin synthesis protein/P47K family protein
[Bradyrhizobium sp. STM 3843]
Length = 349
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 172/288 (59%), Gaps = 13/288 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L ++K G+FD I++ETTGLA PAPV +TF DE V + +
Sbjct: 67 MNNGCICCTVRGDLVRIIDGLMRRK-GKFDAIIVETTGLADPAPVAQTFFVDEDVQKNAR 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLV++ EL + RI+
Sbjct: 126 LDAVVTVADAKWLADRLKDAP------EAKNQIAFADVIVLNKTDLVSKPELAEVEARIR 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDS------EVHVDNSHCATHHHESAHGH 175
IN A + + V + VL G +DL+RI EV + H H+ H H
Sbjct: 180 GINPYAQLHRTERCQVAIADVLERGAFDLDRILEIEPDFLEVDDHDHDHHHHDHDHGHHH 239
Query: 176 HEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQ 235
H H H HD + S+++ ++ LD + WL++L++ +G + R KGIL+ E +
Sbjct: 240 HHDHGLKHYHDEDMQSLSLRTDKPLDPTKFMPWLQQLVQTEGPKILRSKGILAFQDDEDR 299
Query: 236 YVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
YVFQGVH L+G + W E R +++VFIGR L E A+R+GF+ C+
Sbjct: 300 YVFQGVHMMLEGDHQRKWKEGEPRESRVVFIGRELPEAAIREGFERCI 347
>gi|148558087|ref|YP_001257904.1| low affinity zinc transport membrane protein [Brucella ovis ATCC
25840]
gi|148369372|gb|ABQ62244.1| low affinity zinc transport membrane protein [Brucella ovis ATCC
25840]
Length = 343
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 110/286 (38%), Positives = 170/286 (59%), Gaps = 16/286 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V
Sbjct: 71 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRAKTG 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL ++ ++
Sbjct: 130 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPEELVAVEATVR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + + S+ +D VL G +DL+R+ +DN H + H H
Sbjct: 184 AINPHAIIHRTERASIPLDRVLDRGTFDLKRV-----LDNDPHFLDHDDPDHVCGPDCDH 238
Query: 182 NH---MHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+H +HD V SV++ + G +D + W++ + + +G ++ R+KGI++ +YV
Sbjct: 239 DHASPIHDVTVKSVSLRT-GEIDPAKFFPWIQNITQTQGPNILRLKGIIAFKDDPDRYVV 297
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QGVH +G +AW P+EK ++LVFIGR LD AL+ GF+ C A
Sbjct: 298 QGVHMITEGDHQRAWKPEEKHESRLVFIGRELDPAALKAGFENCRA 343
>gi|27382879|ref|NP_774408.1| hypothetical protein bll7768 [Bradyrhizobium japonicum USDA 110]
gi|27356052|dbj|BAC53033.1| bll7768 [Bradyrhizobium japonicum USDA 110]
Length = 348
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 174/289 (60%), Gaps = 14/289 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L K+K G+FD I++ETTGLA PAPV +TF DE V + +
Sbjct: 65 MNNGCICCTVRGDLVRIMDGLMKRK-GKFDAIIVETTGLADPAPVAQTFFVDEDVQKNAR 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLVT+ EL + RI+
Sbjct: 124 LDAVVTVADAKWLSDRLKDAP------EAKNQIAFADVIVLNKTDLVTKGELAEVEARIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-DSEVHVDNSHCATHHHESAHGHHEGHH 180
IN A + + SV + VL G +DL+RI D E + H H+ H H+ HH
Sbjct: 178 AINPYAKLHRTERCSVALADVLDRGAFDLDRILDIEPDFLEADDHDHDHDHHHHGHDHHH 237
Query: 181 H------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQ 234
H H HD + S+++ ++ LD + WL+ L++ +G + R KGIL+ +
Sbjct: 238 HDHGHGLKHYHDEDMQSLSLKTDKPLDPNMFMPWLQNLVQVEGGKILRSKGILAFHDDDD 297
Query: 235 QYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+YVFQGVH L+G + W E R ++LVFIGR L E A+RKGF+ C+
Sbjct: 298 RYVFQGVHMMLEGNHQRKWKDGEPRESRLVFIGRELPEEAIRKGFESCI 346
>gi|398824237|ref|ZP_10582577.1| putative GTPase, G3E family [Bradyrhizobium sp. YR681]
gi|398225066|gb|EJN11348.1| putative GTPase, G3E family [Bradyrhizobium sp. YR681]
Length = 349
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 174/290 (60%), Gaps = 15/290 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L K+K G+FD I++ETTGLA PAPV +TF DE V + +
Sbjct: 65 MNNGCICCTVRGDLVRIMDGLMKRK-GKFDAILVETTGLADPAPVAQTFFVDEDVQKNAR 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLVT+ EL + RI+
Sbjct: 124 LDAVVTVADAKWLSDRLKDAP------EAKNQIAFADVIVLNKTDLVTKGELAEVEARIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-DSEVHVDNSHCATHHHESAHGHHEGHH 180
IN A + + SV + VL G +DL+RI D E N+ H H+ H H+ HH
Sbjct: 178 AINPYAKLHRTERCSVALADVLDRGAFDLDRILDIEPDFLNADDHDHDHDHHHHGHDHHH 237
Query: 181 H-------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSE 233
H HD + S+++ ++ LD + WL+ L++ +G + R KGIL+ +
Sbjct: 238 DHDHSHGLKHYHDEDMQSLSLKTDKPLDPNVFMPWLQNLVQVEGGKILRSKGILAFHDDD 297
Query: 234 QQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+YVFQGVH L+G + W E R ++LVFIGR L E A+R+GF+ C+
Sbjct: 298 DRYVFQGVHMMLEGNHQRKWKDGEARESRLVFIGRELPEKAIREGFESCI 347
>gi|423712420|ref|ZP_17686722.1| hypothetical protein MCQ_01182 [Bartonella washoensis Sb944nv]
gi|395412294|gb|EJF78803.1| hypothetical protein MCQ_01182 [Bartonella washoensis Sb944nv]
Length = 340
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 107/283 (37%), Positives = 173/283 (61%), Gaps = 12/283 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L ++ +FD I+IETTGLA P PV +TF D+ V +
Sbjct: 67 MNNGCVCCTVRGDLIRILESLMQRSH-RFDAIIIETTGLADPIPVAQTFFMDDTVHEKTT 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI +VD+KH L + + E EQ+A++D I+LNK+DL++ E I
Sbjct: 126 LDSVIAVVDAKHLPSQLKKSQ------EVEEQIAFSDIILLNKMDLISAEERAHAQSLIL 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVH-VDNSHCATHHHESAHGHHEGH 179
IN A + + + +D +L G +DL+ +D++ H +D+ H + H H+ H
Sbjct: 180 AINPRAIIYATERADISLDKLLNRGSFDLKHALDNDPHFLDHQH--SDHVCGPACDHDHH 237
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
H + +HD+ ++SV++ + G L ++ W++++ +++G D+ R+KGI++ G +YV Q
Sbjct: 238 HTSTIHDTTITSVSLKT-GALKPEKFFSWIQQVTQQQGPDILRLKGIIAFQGDNDRYVIQ 296
Query: 240 GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
G+H L+G + W DEKR ++LVFIGR LD L+ GF+ C
Sbjct: 297 GIHMILEGQHQRPWHEDEKRESRLVFIGRTLDAEKLKIGFENC 339
>gi|302529201|ref|ZP_07281543.1| cobalamin biosynthesis protein CobW [Streptomyces sp. AA4]
gi|302438096|gb|EFL09912.1| cobalamin biosynthesis protein CobW [Streptomyces sp. AA4]
Length = 326
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 160/282 (56%), Gaps = 22/282 (7%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
M N CLCCT R DL+++L L ++++ +FD I+IET+G+A P PV +TF D+ VS
Sbjct: 60 MSNGCCLCCTARTDLIEILQSLLRRRE-RFDRILIETSGMADPNPVAQTFFVDDEVSSAF 118
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
LD ++TLVD++H HL E + V + Q+A+ADRI+LNKIDLVTE E+ L R+
Sbjct: 119 ALDAIVTLVDARHVGSHLEEGEHDGVGGQVSNQIAFADRIVLNKIDLVTEPEIEELRARL 178
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
+ +NA A + + YG+VD+D +LG+ +DL R T + + HH
Sbjct: 179 RSVNATADILTSSYGNVDLDDILGINAFDLNR-------------TVAADPDWLEDDAHH 225
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
HD + SV+I + LD + WL L+ E+G+DLYR KGIL+ +++ V QG
Sbjct: 226 ----HDPTLESVSIELDDPLDRAAFEGWLTALLAERGDDLYRFKGILAF---DRKTVLQG 278
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
VH + WG ++KLV IGRNLD L C
Sbjct: 279 VHRIYELTDAGEWGA-APPVSKLVLIGRNLDRAELTDTVSRC 319
>gi|384215315|ref|YP_005606481.1| hypothetical protein BJ6T_16110 [Bradyrhizobium japonicum USDA 6]
gi|354954214|dbj|BAL06893.1| hypothetical protein BJ6T_16110 [Bradyrhizobium japonicum USDA 6]
Length = 347
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 174/289 (60%), Gaps = 14/289 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L K+K G+FD I++ETTGLA PAPV +TF DE V + +
Sbjct: 64 MNNGCICCTVRGDLVRIMDGLMKRK-GKFDAIIVETTGLADPAPVAQTFFVDEDVQKNAR 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLVT+ EL + RI+
Sbjct: 123 LDAVVTVADAKWLSDRLKDAP------EAKNQIAFADVIVLNKTDLVTKPELAEVEARIR 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-DSEVHVDNSHCATHHHESAHGHHEGHH 180
IN A + + SV + VL G +DL+RI D E + H H+ H H+ HH
Sbjct: 177 AINPYAKLHRTERCSVALADVLDRGAFDLDRILDIEPDFLEADDHDHDHDHHHHGHDHHH 236
Query: 181 H------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQ 234
H H HD + S+++ ++ LD + WL+ L++ +G + R KGIL+ +
Sbjct: 237 HDHGHGLKHYHDEDMQSLSLKTDKPLDPNVFMPWLQNLVQVEGGKILRSKGILAFHDDDD 296
Query: 235 QYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+YVFQGVH L+G + W E R ++LVFIGR L E A+R+GF+ C+
Sbjct: 297 RYVFQGVHMMLEGNHQRKWKDGEPRESRLVFIGRELPEKAIREGFESCI 345
>gi|372487275|ref|YP_005026840.1| putative GTPase, G3E family [Dechlorosoma suillum PS]
gi|359353828|gb|AEV24999.1| putative GTPase, G3E family [Dechlorosoma suillum PS]
Length = 331
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 112/286 (39%), Positives = 165/286 (57%), Gaps = 26/286 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCTVRGDL ++L +L AK+ G FD ++IETTGLA P PV +TF + V+Q
Sbjct: 64 MNNGCICCTVRGDLTRILGELVAKRANGTLHFDRVLIETTGLADPGPVAQTFLVEPEVAQ 123
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+LD ++TLVD+KHAM L++ + A EQV +ADR++L K DLV+E E +L
Sbjct: 124 AYRLDAILTLVDAKHAMAQLDQHEI------AQEQVGFADRLLLTKTDLVSEAEKAALIA 177
Query: 119 RIKHINAMAPVKLAKYGS-VDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
R+ IN A + G VD+ +L V + LE + + + A+ HH
Sbjct: 178 RLVDINGRAAIYETLQGQGVDLAALLDVNSFSLESV---LEREPDFLASGHH-------- 226
Query: 178 GHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYV 237
HHHN +A+SS + G D +D++ L++ GED+ R KG+L+V+G Q +
Sbjct: 227 -HHHN----NAISSFAFTTHGEFDPARLDEFFGALVQVYGEDMLRYKGLLAVTGQAHQII 281
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH + G+ W +E R +++VFIGRNL KG + C+
Sbjct: 282 LQGVHMLVATNVGRPWAENEARESRIVFIGRNLPRDIFEKGLRQCI 327
>gi|386392262|ref|ZP_10077043.1| putative GTPase, G3E family [Desulfovibrio sp. U5L]
gi|385733140|gb|EIG53338.1| putative GTPase, G3E family [Desulfovibrio sp. U5L]
Length = 323
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 166/284 (58%), Gaps = 24/284 (8%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
++NNGC+CC+VRGDL+++L LA+++ G FD +++ETTGLA PA +I+TF DE
Sbjct: 59 LMNNGCVCCSVRGDLIRVLGGLARRR-GAFDGVLLETTGLADPAAIIQTFAMDEDTRDAF 117
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
+LD V T+VD+ H H E + +A+EQV YAD +I+NK DLV + L +T +
Sbjct: 118 QLDTVTTVVDAVHFRGHAVENR------QALEQVVYADLVIVNKTDLVGQDVLDDITATV 171
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
K +NA A + A + + +L +D+ R+ G E H
Sbjct: 172 KRLNATAEILPAVRCGLPLAKILDRKAFDIGRL-------------LFAHPGLGGQEPHE 218
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
H+H + S+++ G LD +++ +L L++E G+D+YR KGI+ V+G++Q+++FQG
Sbjct: 219 HDH----GIQSLSLTVAGPLDPEKLGTFLSTLLQEHGQDIYRSKGIMDVAGTKQRFIFQG 274
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
VH L+ G W DE+R ++ VFIGR LD L KG GC A
Sbjct: 275 VHMYLETAWGTPWKEDEERTSRAVFIGRGLDRGMLEKGLAGCAA 318
>gi|407724146|ref|YP_006843807.1| hypothetical protein BN406_06525 [Sinorhizobium meliloti Rm41]
gi|407324206|emb|CCM72807.1| hypothetical protein BN406_06525 [Sinorhizobium meliloti Rm41]
Length = 350
Score = 199 bits (507), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 174/285 (61%), Gaps = 10/285 (3%)
Query: 2 VNNGCLCC--TVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+ NGC+CC VR DL+++L +L +K +FDHI++ET+GLA P PV F D+ + ++
Sbjct: 67 MKNGCICCFVDVRNDLIEVLQKLLARKD-KFDHILVETSGLADPTPVATAFFIDDEIGKH 125
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
V LDG++TLVD+KH QH+++ N+AV+Q+ ADRII+NKIDLV+E E+ L
Sbjct: 126 VTLDGIVTLVDAKHIGQHIDDPVLDGRDNQAVDQIVAADRIIINKIDLVSEGEIAPLERG 185
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGH 179
++ +N A + + YG VD+ +LG+ G+ + +V H H H
Sbjct: 186 MRKLNQTAEIVRSSYGRVDLSSILGISGF------APSYVAERAKLLDLDHHHHHHDHHH 239
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
HH+H+HD+ VSS + V + D + D+L L+ E+G+D++R KGI++++G + +V Q
Sbjct: 240 HHHHLHDATVSSESFVFDRPFDQGRLTDYLSGLLREEGDDIFRTKGIIAIAGDPRFFVLQ 299
Query: 240 GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
VH +D P WG D KLVFIGRNLD AL +G + CLA
Sbjct: 300 AVHKLMDFRPDHVWGKDMP-YTKLVFIGRNLDRAALERGLERCLA 343
>gi|384533970|ref|YP_005716634.1| cobalamin synthesis protein P47K [Sinorhizobium meliloti BL225C]
gi|433611702|ref|YP_007195163.1| Putative GTPases (G3E family) [Sinorhizobium meliloti GR4]
gi|333816146|gb|AEG08813.1| cobalamin synthesis protein P47K [Sinorhizobium meliloti BL225C]
gi|429556644|gb|AGA11564.1| Putative GTPases (G3E family) [Sinorhizobium meliloti GR4]
Length = 349
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 172/285 (60%), Gaps = 11/285 (3%)
Query: 2 VNNGCLCC--TVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+ NGC+CC VR DL+++L +L +K +FDHI++ET+GLA P PV F D+ + ++
Sbjct: 67 MKNGCICCFVDVRNDLIEVLQKLLARKD-KFDHILVETSGLADPTPVATAFFIDDEIGKH 125
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
V LDG++TLVD+KH QH+++ N+AV+Q+ ADRII+NKIDLV+E E+ L
Sbjct: 126 VTLDGIVTLVDAKHIGQHIDDPVLDGRDNQAVDQIVAADRIIINKIDLVSELEIAPLERG 185
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGH 179
++ +N A + + YG VD+ +LG+ G+ + + H H H
Sbjct: 186 MRKLNQTAEIVRSSYGRVDLSSILGISGFAPSYV-------AERAKLLDLDHHHHHDHHH 238
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
H +H+HD+ VSS + V + D + D+L L+ E+G+D++R KGI++++G + +V Q
Sbjct: 239 HDHHLHDATVSSESFVFDRPFDQGRLTDYLSGLLREEGDDIFRTKGIIAIAGDPRFFVLQ 298
Query: 240 GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
VH +D P WG D KLVFIGRNLD AL KG + CLA
Sbjct: 299 AVHKLMDFRPDHVWGKDMP-YTKLVFIGRNLDRAALEKGLERCLA 342
>gi|374578182|ref|ZP_09651278.1| putative GTPase, G3E family [Bradyrhizobium sp. WSM471]
gi|374426503|gb|EHR06036.1| putative GTPase, G3E family [Bradyrhizobium sp. WSM471]
Length = 349
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 173/290 (59%), Gaps = 15/290 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L K+K G+FD I++ETTGLA PAPV +TF DE V + +
Sbjct: 65 MNNGCICCTVRGDLVRIMEGLMKRK-GKFDAIIVETTGLADPAPVAQTFFVDEDVQKNAR 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLVT+ EL + RI+
Sbjct: 124 LDAVVTVADAKWLSDRLKDAP------EAKNQIAFADVIVLNKTDLVTKGELAEVEARIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI--------DSEVHVDNSHCATHHHESAH 173
IN A + + SV + VL G +DL+RI ++E H + H H+ H
Sbjct: 178 AINPYAKLHRTERCSVALADVLDRGAFDLDRILDIEPDFLNAEDHDHDHDHHHHGHDHHH 237
Query: 174 GHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSE 233
H GH H HD + S+++ ++ LD + WL+ L++ +G + R KGIL+ +
Sbjct: 238 DHDHGHGLKHYHDEDMQSLSLKTDKPLDPNVFMPWLQNLVQVEGGKILRSKGILAFHDDD 297
Query: 234 QQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+YVFQGVH L+G + W E R ++LVFIGR L + +R+GF+ C+
Sbjct: 298 DRYVFQGVHMMLEGNHQRKWKDGEPRESRLVFIGRELPQDLIRQGFESCI 347
>gi|402848758|ref|ZP_10897009.1| Putative metal chaperone, involved in Zn homeostasis, GTPase of
COG0523 family [Rhodovulum sp. PH10]
gi|402501037|gb|EJW12698.1| Putative metal chaperone, involved in Zn homeostasis, GTPase of
COG0523 family [Rhodovulum sp. PH10]
Length = 352
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 170/308 (55%), Gaps = 35/308 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGCLCCTVRGDLV+++ L +++ G+FD I++ETTGLA PAPV +TF DE V + K
Sbjct: 55 MNNGCLCCTVRGDLVRIVRGLMRRR-GKFDGIIVETTGLADPAPVAQTFFVDEDVGKAAK 113
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD +++NK DLV + EL + ++
Sbjct: 114 LDAVVTVADAKWLRDRLKDAP------EAKNQIAFADVVLINKADLVGKDELLDVEAHVR 167
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + + +V +D VLG +DL+RI + ++ + T H H+ H
Sbjct: 168 AINPYAKLHRTERCAVPLDAVLGRNAFDLDRI---LDIEPAFLETDDEHDHHHGHDHGHE 224
Query: 182 -------------------------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK 216
H HD + S I +E L+ D W+++L+ E+
Sbjct: 225 GHDHEGHDHHHHHDDHGHEHGHGGLKHFHDEHIQSFGIDTERPLNPDTFFPWIQKLVAEE 284
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
G + R KGILS ++VFQGVH LDG + W DE R ++LVFIGR+L E A+R
Sbjct: 285 GPKILRCKGILSFRDDPDRFVFQGVHMILDGDHQRPWQDDETRRSRLVFIGRDLPEAAIR 344
Query: 277 KGFKGCLA 284
GF+ C+A
Sbjct: 345 AGFEACIA 352
>gi|307947371|ref|ZP_07662705.1| cobw domain-containing protein 1 [Roseibium sp. TrichSKD4]
gi|307769513|gb|EFO28740.1| cobw domain-containing protein 1 [Roseibium sp. TrichSKD4]
Length = 332
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/283 (40%), Positives = 169/283 (59%), Gaps = 23/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G FD I+IETTGLA PAPV +TF D+ V + K
Sbjct: 63 MNNGCICCTVRGDLIRIIEGLMRRT-GAFDAILIETTGLADPAPVAQTFFVDDDVRRKTK 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD+KH + ++ +EA EQ+A+AD ++LNK DLVT EL ++ RI+
Sbjct: 122 LDAIVTVVDAKHLLGEIDHA------HEAQEQLAFADIVLLNKTDLVTPDELAAVETRIR 175
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN ++ + V +D +L +DL+RI EV D +GHHH
Sbjct: 176 KINPTTTIRQSTRCDVPLDQILNRNAFDLDRI-LEVEPD--------------FLDGHHH 220
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+H V+S ++V+E LD V W++ + ++ G D+ RMKGILS ++V Q V
Sbjct: 221 HHHD-DHVTSFSLVTEEPLDPQRVLPWVQMITQQYGTDILRMKGILSFKDDNDRFVVQAV 279
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H L+G + W +E RI++LVFIGRNL + KGF C A
Sbjct: 280 HMLLEGDHQRPWHDNEPRISRLVFIGRNLPKDLFEKGFMNCRA 322
>gi|428168295|gb|EKX37242.1| hypothetical protein GUITHDRAFT_158618 [Guillardia theta CCMP2712]
Length = 363
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/286 (39%), Positives = 174/286 (60%), Gaps = 11/286 (3%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CC+VR DL+ L ++ K + +FD+I++ETTG+A P P+ F D + +
Sbjct: 82 MNNGCICCSVRDDLINTLERIMKNRN-KFDYILVETTGMANPGPIASIFWLDSELESSLH 140
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVN-EAVEQVAYADRIILNKIDLVTETELGSLTERI 120
LD ++TLVD+KH ++HL++ P + EA +Q+A+ADRI+LNKIDLVTE E+ + R+
Sbjct: 141 LDAIVTLVDAKHILKHLDD--PALCSSLEAAQQIAFADRILLNKIDLVTEAEVEVVERRL 198
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNS-HCATHHHESAHGHHEGH 179
+ IN +AP+ + +D+D +L V +D ER EV + S H E GH H
Sbjct: 199 REINGVAPIYRTQNSEIDLDNILDVKAFDAERA-KEVELGTSADKGCEHGEDCSGHD--H 255
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLI--EEKGEDLYRMKGILSVSGSEQQYV 237
HDS + +V+ + LD +++ WL ++ E G ++RMKG+L++ G E Q V
Sbjct: 256 SSKVNHDSKIGTVSCSEDRALDERKLNLWLGGVLWENEGGMTIFRMKGLLTIHGEETQMV 315
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ D P +A + R +K+VFIG+NLD AL+KG C+
Sbjct: 316 LQGVHNLFDILPAQAQVDSQSR-SKIVFIGQNLDRLALQKGLSSCV 360
>gi|194290912|ref|YP_002006819.1| gtpase; cobalamin synthesis protein cobw homolog [Cupriavidus
taiwanensis LMG 19424]
gi|193224747|emb|CAQ70758.1| putative GTPase; putative Cobalamin synthesis protein cobW homolog
[Cupriavidus taiwanensis LMG 19424]
Length = 368
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/305 (37%), Positives = 176/305 (57%), Gaps = 33/305 (10%)
Query: 2 VNNGCLCCTV--RGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+ NGC+CC V R DLV++L +L ++ + +FDHI++ET+GLA P PV TF D V++
Sbjct: 68 MTNGCICCVVDVRTDLVRILQKLLERPE-RFDHILVETSGLADPTPVAATFFMDNEVARQ 126
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
V LDG++TLVD+ H HL++ + N+AV+Q+ ADR+ILNK DLV +L L R
Sbjct: 127 VTLDGILTLVDAVHIESHLDDPQLTGFDNQAVDQIVAADRVILNKTDLVDAAQLDRLEAR 186
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERID---------------------SEVH 158
I +N A + + + VD+ +LG+GG+ I H
Sbjct: 187 IHRLNEGAQILRSNFAQVDLGKILGIGGFTPGTIQADAHDGHAHAHANPDRHHDHDHHDH 246
Query: 159 VDNSHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGE 218
V + HC H + AHGH HD +V+SV++V + D ++ L+ L+ +G+
Sbjct: 247 VCDEHCDHAHDDDAHGHR--------HDPSVTSVSLVFDQPFDRQRLEHGLKALLAAQGD 298
Query: 219 DLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKG 278
D++RMKGI++V G +++YV Q VH +D P +AWG + + +K VFIGR+LD+ L+
Sbjct: 299 DVFRMKGIVAVEGDDRRYVLQAVHRLMDFHPAEAWGAEPAQ-SKFVFIGRHLDKLRLQTL 357
Query: 279 FKGCL 283
K CL
Sbjct: 358 LKVCL 362
>gi|395767447|ref|ZP_10447982.1| hypothetical protein MCS_00915 [Bartonella doshiae NCTC 12862]
gi|395414760|gb|EJF81202.1| hypothetical protein MCS_00915 [Bartonella doshiae NCTC 12862]
Length = 337
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 174/283 (61%), Gaps = 15/283 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L ++ +FD I+IETTGLA P PV +TF DE +++
Sbjct: 67 MNNGCICCTVRGDLIRILESLMQRSH-RFDAIIIETTGLADPIPVAQTFFMDESINKKTI 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI +VD+KH L E +EA +Q+A++D ++LNKIDLV+ E + I
Sbjct: 126 LDSVIAVVDAKHFPLQLKES------HEAEDQIAFSDIVLLNKIDLVSVEERAHVESLIL 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVH-VDNSHCATHHHESAHGHHEGH 179
IN A + ++ +D +L G +DL+R +D++ + +D H + HH+ H H
Sbjct: 180 AINPRAVIYTTNRANIPLDKLLNRGSFDLQRTLDNDPNFLDLQH--SDHHDCNHDHE--- 234
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
H + HD ++SV++ + GTL ++ W++++ + +G ++ R+KGI++ G +YV Q
Sbjct: 235 HISTTHDITITSVSLKT-GTLQPEKFFPWIQQVTQRQGPNILRLKGIIAFQGDNDRYVIQ 293
Query: 240 GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
G+H L+G + W DEKR ++LVFIGR LD L+ G + C
Sbjct: 294 GIHMILEGEHQRPWRDDEKRESRLVFIGRALDAEKLKTGLENC 336
>gi|418402759|ref|ZP_12976264.1| cobalamin synthesis protein P47K [Sinorhizobium meliloti
CCNWSX0020]
gi|359503253|gb|EHK75810.1| cobalamin synthesis protein P47K [Sinorhizobium meliloti
CCNWSX0020]
Length = 349
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 173/285 (60%), Gaps = 11/285 (3%)
Query: 2 VNNGCLCC--TVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+ NGC+CC VR DL+++L +L +K +FDHI++ET+GLA P PV F D+ + ++
Sbjct: 67 MKNGCICCFVDVRNDLIEVLQKLLARKD-KFDHILVETSGLADPTPVATAFFIDDEIGKH 125
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
V LDG++TLVD+KH QH+++ N+AV+Q+ ADRII+NKIDLV+E E+ L
Sbjct: 126 VTLDGIVTLVDAKHIGQHIDDPVLDGRDNQAVDQIVAADRIIINKIDLVSEVEIAPLERG 185
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGH 179
++ +N A + + YG VD+ +LG+ G+ + + H H H
Sbjct: 186 MRKLNQTAEIVRSSYGRVDLSSILGISGFAPSYV-------AERAKLLDLDHHHHHDHHH 238
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
HH+H+HD+ VSS + V + D + D+L L+ E+G+D++R KGI++++G + +V Q
Sbjct: 239 HHHHLHDATVSSESFVFDRPFDQGRLTDYLSGLLREEGDDIFRTKGIIAIAGDPRFFVLQ 298
Query: 240 GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
VH +D P WG D KLVFIGRNLD AL +G + CLA
Sbjct: 299 AVHKLMDFRPDHVWGKDMP-YTKLVFIGRNLDRAALERGLERCLA 342
>gi|223995657|ref|XP_002287502.1| hypothetical protein THAPSDRAFT_39666 [Thalassiosira pseudonana
CCMP1335]
gi|220976618|gb|EED94945.1| hypothetical protein THAPSDRAFT_39666 [Thalassiosira pseudonana
CCMP1335]
Length = 343
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/284 (40%), Positives = 164/284 (57%), Gaps = 17/284 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
++NGC+CC+VRGDLV+ L QLA +++ FD I++ETTGLA PAP++ T T+ +S +
Sbjct: 68 MDNGCVCCSVRGDLVRTLGQLAPRRK-DFDAILLETTGLADPAPIVYTVQTNPKMSDNYR 126
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
+D ++ L D KH HL+E KP +NEA++QVA+AD+I+LNKIDLVT+ E ++ R++
Sbjct: 127 IDSIVCLADCKHLGAHLDEKKPDGSINEALQQVAFADKILLNKIDLVTKEEKEAVEARLR 186
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A V + +D +LG+ +++E I S + E H
Sbjct: 187 TINKFATVIETEKSRAPLDRILGLNSFNMESILS-----------YDPNFFDEEEEKKIH 235
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGS-EQQYVFQG 240
N V SV I EG L + ++ L+ E+ DLYR KG+LS G + ++VFQG
Sbjct: 236 NL---ELVQSVGIKFEGNLHAQWFNMFMMDLLRERAADLYRTKGLLSFHGQGDTKFVFQG 292
Query: 241 VHSTLDGCPG-KAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
VH ++ P K W E R NK VFIG+NLD L K CL
Sbjct: 293 VHEQINFGPAQKPWAEGEVRENKFVFIGKNLDRAELTKSLMECL 336
>gi|384539709|ref|YP_005723793.1| hypothetical protein SM11_pD1460 [Sinorhizobium meliloti SM11]
gi|336038362|gb|AEH84292.1| conserved hypothetical protein [Sinorhizobium meliloti SM11]
Length = 349
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/285 (39%), Positives = 172/285 (60%), Gaps = 11/285 (3%)
Query: 2 VNNGCLCC--TVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+ NGC+CC VR DL+++L +L +K +FDHI++ET+GLA P PV F D+ + ++
Sbjct: 67 MKNGCICCFVDVRNDLIEVLQKLLARKD-KFDHILVETSGLADPTPVATAFFIDDEIGKH 125
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
V LDG++TLVD+KH QH+++ N+AV+Q+ ADRII+NKIDLV+E E+ L
Sbjct: 126 VTLDGIVTLVDAKHIGQHIDDPVLDGRDNQAVDQIVAADRIIINKIDLVSELEIAPLERG 185
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGH 179
++ +N A + + YG VD+ +LG+ G+ + + H H H
Sbjct: 186 MRKLNQTAEIVRSSYGRVDLSSILGISGFAPSYV-------AERAKLLDLDHHHHHDHHH 238
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
H +H+HD+ VSS + V + D + D+L L+ E+G+D++R KGI++++G + +V Q
Sbjct: 239 HDHHLHDATVSSESFVFDRPFDQGRLTDYLSGLLREEGDDIFRTKGIMAIAGDPRFFVLQ 298
Query: 240 GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
VH +D P WG D KLVFIGRNLD AL +G + CLA
Sbjct: 299 AVHKLMDFRPDHVWGKDMP-YTKLVFIGRNLDRAALERGLERCLA 342
>gi|261217573|ref|ZP_05931854.1| cobalamin synthesis protein P47K [Brucella ceti M13/05/1]
gi|261320450|ref|ZP_05959647.1| cobalamin synthesis protein P47K [Brucella ceti M644/93/1]
gi|260922662|gb|EEX89230.1| cobalamin synthesis protein P47K [Brucella ceti M13/05/1]
gi|261293140|gb|EEX96636.1| cobalamin synthesis protein P47K [Brucella ceti M644/93/1]
Length = 347
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 172/290 (59%), Gaps = 20/290 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V
Sbjct: 71 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRAKTG 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL ++ ++
Sbjct: 130 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPEELAAVEATVR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAH-------G 174
IN A + + S+ +D VL G +DL+R+ +DN H + H
Sbjct: 184 AINPHAIIHRTERASIPLDRVLDRGAFDLKRV-----LDNDPHFLDHDDPDHVCGPDCDH 238
Query: 175 HHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQ 234
H+ H + +HD V SV++ + G +D + W++ + + +G ++ R+KGI++
Sbjct: 239 DHDHDHASPIHDVTVKSVSLRT-GEIDPAKFFPWIQNITQTQGPNILRLKGIIAFKDDPD 297
Query: 235 QYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+YV QGVH ++G +AW P+EK ++LVFIGR LD AL+ GF+ C A
Sbjct: 298 RYVVQGVHMIIEGDHQRAWKPEEKHESRLVFIGRELDPAALKAGFENCRA 347
>gi|421597368|ref|ZP_16041001.1| hypothetical protein BCCGELA001_08419 [Bradyrhizobium sp.
CCGE-LA001]
gi|404270518|gb|EJZ34565.1| hypothetical protein BCCGELA001_08419 [Bradyrhizobium sp.
CCGE-LA001]
Length = 348
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 172/289 (59%), Gaps = 14/289 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L K+K G+FD I++ETTGLA PAPV +TF DE V + +
Sbjct: 65 MNNGCICCTVRGDLVRIMDGLMKRK-GKFDAIIVETTGLADPAPVAQTFFVDEDVQKNAR 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLV + EL + RI+
Sbjct: 124 LDAVVTVADAKWLSDRLKDAP------EAKNQIAFADVIVLNKTDLVNKGELAEVEARIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-DSEVHVDNSHCATHHHESAHGHHEGHH 180
IN A + + SV + VL G +DL+RI D E + H H+ H H+ H
Sbjct: 178 GINPYAKLHRTERCSVALADVLDRGAFDLDRILDIEPDFLEADDHDHDHDHHHHGHDHDH 237
Query: 181 H------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQ 234
H H HD + S+++ ++ LD + WL+ L++ +G + R KGIL+ +
Sbjct: 238 HHHGHGLKHYHDEDMQSLSLKTDKPLDPNVFMPWLQNLVQVEGGKILRSKGILAFHDDDD 297
Query: 235 QYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+YVFQGVH L+G + W E R ++LVFIGR L E A+RKGF+ C+
Sbjct: 298 RYVFQGVHMMLEGNHQRKWKEGEPRESRLVFIGRELPEEAIRKGFESCI 346
>gi|114705394|ref|ZP_01438302.1| low affinity zinc transport membrane protein [Fulvimarina pelagi
HTCC2506]
gi|114540179|gb|EAU43299.1| low affinity zinc transport membrane protein [Fulvimarina pelagi
HTCC2506]
Length = 374
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 175/300 (58%), Gaps = 25/300 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L ++K G+FD I++ETTGLA P PV +TF DE V +
Sbjct: 75 MNNGCVCCTVRGDLVRVVEGLTRRK-GRFDAILVETTGLADPVPVAQTFFMDEDVRAKTE 133
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD ++LNK DLV+ +L + I+
Sbjct: 134 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLLNKTDLVSADDLSKVEATIR 187
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI---DSEVHVDNSHCATHH---------- 168
IN A + + +D+ VLG +DL+++ D + + SH H
Sbjct: 188 AINPHAVIHRTERAGIDLAKVLGQKAFDLKKVLDSDPDFLEEASHAHDDHVCGPDCDHQH 247
Query: 169 ----HESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMK 224
H+ H HH + +HD V+S+++ + G LD + W++ L +E+G ++ R+K
Sbjct: 248 NHHDHDHDHHHHAHGEASAIHDVTVTSISLKA-GELDSKKFFPWIQALTQEEGPNILRLK 306
Query: 225 GILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
GI++ G +YV QGVH ++G +AW DEKR ++LVFIGRNLD L GF C A
Sbjct: 307 GIIAFDGDPDRYVVQGVHMIIEGDHQRAWRVDEKRESRLVFIGRNLDREELEAGFAACAA 366
>gi|386398588|ref|ZP_10083366.1| putative GTPase, G3E family [Bradyrhizobium sp. WSM1253]
gi|385739214|gb|EIG59410.1| putative GTPase, G3E family [Bradyrhizobium sp. WSM1253]
Length = 349
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 173/290 (59%), Gaps = 15/290 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L K+K G+FD I++ETTGLA PAPV +TF DE V + +
Sbjct: 65 MNNGCICCTVRGDLVRIMEGLMKRK-GKFDAIIVETTGLADPAPVAQTFFVDEDVQKNAR 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLVT+ EL + RI+
Sbjct: 124 LDAVVTVADAKWLSDRLKDAP------EAKNQIAFADVIVLNKTDLVTKGELAEVEARIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-DSEVHVDNSHCATHHHESAHGHHEGHH 180
IN A + + SV + VL G +DL+RI D E N+ H H+ H H+ HH
Sbjct: 178 AINPYAKLHRTERCSVALADVLDRGAFDLDRILDIEPDFLNADDHDHDHDHHHHGHDHHH 237
Query: 181 H-------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSE 233
H HD + S+++ ++ LD + WL+ L++ +G + R KGIL+ +
Sbjct: 238 DHDHGHGLKHYHDEDMQSLSLKTDKPLDPNVFMPWLQNLVQVEGGKILRSKGILAFHDDD 297
Query: 234 QQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+YVFQGVH L+G + W E R ++LVFIGR L + +R+GF+ C+
Sbjct: 298 DRYVFQGVHMMLEGNHQRKWKDGEPRESRLVFIGRELPQDLIRQGFESCI 347
>gi|434384609|ref|YP_007095220.1| putative GTPase, G3E family [Chamaesiphon minutus PCC 6605]
gi|428015599|gb|AFY91693.1| putative GTPase, G3E family [Chamaesiphon minutus PCC 6605]
Length = 334
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 165/282 (58%), Gaps = 27/282 (9%)
Query: 3 NNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETF-CTDELVSQYVK 61
NNGCLCCTVRGDLV+ L L K+ D ++IETTGLA PAPV TF DE+ S++
Sbjct: 78 NNGCLCCTVRGDLVRTLEDLTKR--ADLDAVLIETTGLADPAPVASTFIVADEIKSKF-S 134
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD +T+VD+++ Q+L + +EA EQVA+AD I++NKIDLV++ ++ + ++I
Sbjct: 135 LDAFVTVVDARNLQQNLKDS------HEAQEQVAFADIILINKIDLVSDKDIARVKQQIW 188
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+N +A + ++ +D+ +LG +DLE +++ VD S HE
Sbjct: 189 ELNPIAKIYQTEHSEIDLSLILGTKAFDLE---AKLEVDPSFLEDLAHE----------- 234
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD+A+ S + S+ +D+++ W+ L +EKGEDLYR KG+ G +++ +FQ V
Sbjct: 235 ---HDAAIGSFALTSDRPIDMNKFMLWMNDLAQEKGEDLYRTKGLFYAQGFQERVLFQSV 291
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+ W DE ++ +LV IGRNLD KGF+ C+
Sbjct: 292 RMLTSMRRDRLWKTDEPKLTQLVAIGRNLDREEFVKGFEKCV 333
>gi|158422189|ref|YP_001523481.1| CobW protein [Azorhizobium caulinodans ORS 571]
gi|158329078|dbj|BAF86563.1| putative CobW protein [Azorhizobium caulinodans ORS 571]
Length = 388
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 164/307 (53%), Gaps = 31/307 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++K GQFD I++ETTGLA PAPV +TF DE V K
Sbjct: 89 MNNGCICCTVRGDLIRIIDGLLRRK-GQFDGIIVETTGLADPAPVAQTFFVDEEVGAKTK 147
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLV+ EL + RI+
Sbjct: 148 LDAVVTVADAKWLSDRLKDAP------EAKNQIAFADVILLNKTDLVSADELAEVEGRIR 201
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHH----- 176
IN A + + ++++ VL G +DL+RI + H H+ G
Sbjct: 202 GINPYARLYRTQKSQIEIEKVLNQGAFDLDRILALEPAFLEEGEDHDHDHTCGPDCGHDH 261
Query: 177 -------------------EGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG 217
H HD + SV+ ++ LD D+ W++ ++ G
Sbjct: 262 HHHDHGHHHDHGHDHHHGHSHGGLKHYHDEEMQSVSFSTDKLLDPDKFFPWVQNVVATDG 321
Query: 218 EDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRK 277
++ R KGIL+ ++VFQGVH LDG + W PDE +++++VFIGR+L L
Sbjct: 322 ANILRSKGILAFKDDPDRFVFQGVHMILDGDHQRPWKPDEPQVSRIVFIGRHLPTEKLES 381
Query: 278 GFKGCLA 284
GF C+A
Sbjct: 382 GFLSCVA 388
>gi|390574145|ref|ZP_10254286.1| putative GTPase [Burkholderia terrae BS001]
gi|389933893|gb|EIM95880.1| putative GTPase [Burkholderia terrae BS001]
Length = 340
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/293 (38%), Positives = 166/293 (56%), Gaps = 28/293 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CC VRGDL++++ L ++K G FD I+IE +GLA PAPV++TF D+L+ Q+ +
Sbjct: 60 LNNGCVCCKVRGDLIRVVSGLIRRKSG-FDGILIEMSGLADPAPVVQTFFVDDLIRQHTR 118
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI + D+ H HL + + EA EQ+A AD ++LNK DLV EL S+ E I
Sbjct: 119 LDSVICVADACHLHMHLADSR------EAAEQLAQADVVLLNKADLVGTAELASVKEAIH 172
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHH---HESAHGHHEG 178
IN A + +V + +L G +DL+R+ H A E A G
Sbjct: 173 RINPTAEMLQGVRCAVALSTLLDRGAFDLKRL---------HLAAPQPGGSEFARGERSW 223
Query: 179 HHHN---------HMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSV 229
+ H + SV++ + +L+ WL +L+ E+G DL R KGI+ +
Sbjct: 224 RYVPVNPRAAVDLGRHSHGIDSVSLRVDTSLERTRFLSWLRQLVVEQGRDLLRAKGIVDL 283
Query: 230 SGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
+GSE+++VFQGVH T+D + W DE R ++LVFIGRNLD LR+ + C
Sbjct: 284 AGSERRFVFQGVHMTMDTDFDRPWRADEHRDSRLVFIGRNLDRRDLRESIRYC 336
>gi|307944424|ref|ZP_07659764.1| cobw domain-containing protein 1 [Roseibium sp. TrichSKD4]
gi|307772173|gb|EFO31394.1| cobw domain-containing protein 1 [Roseibium sp. TrichSKD4]
Length = 349
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 176/289 (60%), Gaps = 14/289 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++ + L K++ G FD IV+ETTG+A PAPV +TF D+ V K
Sbjct: 68 MNNGCICCTVRGDLIRTVQNLMKRR-GAFDAIVVETTGVADPAPVAQTFFMDDDVRTASK 126
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD++H +Q L + +EA +Q+A+AD I++NK DLV+ EL ++ RI+
Sbjct: 127 LDAVVTVVDARHVLQRLED------TSEAEDQIAFADVILINKTDLVSAEELANVEARIR 180
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-----DSEVHVDNSH-CATHHHESAHGH 175
IN A + ++ +V++ VL G +DL+RI D D++H C H
Sbjct: 181 KINPYAVLHRSERCAVELKAVLNRGAFDLDRILSLDPDFLGQDDHTHECGPDCDHDHHHD 240
Query: 176 HEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQ 235
H HHH+ +V S+++ + G L+ D W+ ++ + +G ++ RMKGI++ Q+
Sbjct: 241 HGHHHHHEEDPHSVKSISLTA-GDLNPDMFFPWINQVTQVQGPNILRMKGIIAFKDDPQR 299
Query: 236 YVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
YV QGVH ++G + W DE R ++LVFIGR+L+ L++ F C A
Sbjct: 300 YVIQGVHMIVEGDHQRDWQDDEDRTSRLVFIGRDLNWDVLKQSFAACEA 348
>gi|319407528|emb|CBI81176.1| putative cobalamin synthesis protein [Bartonella sp. 1-1C]
Length = 344
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 174/286 (60%), Gaps = 12/286 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L ++ +FD I+IETTG+A P PV +TF D+ V
Sbjct: 67 MNNGCVCCTVRGDLIRVLESLMQRS-SRFDAIIIETTGIANPTPVAQTFFMDDTVRDKTA 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VITL+D+KH L E + EA +Q+A+AD I+LNKIDLV+ E + I
Sbjct: 126 LDSVITLIDAKHLPLQLKESR------EAEDQIAFADIILLNKIDLVSAEERAHIESLIY 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-DSEVHVDNSHCATH---HHESAHGHHE 177
IN+ A + + ++ ++ +L G +DL+RI +++ H N H HH
Sbjct: 180 TINSNAIIYATERANIPLNKILNRGSFDLQRILENDPHFLNHENPDHVCSPECDHEHHHG 239
Query: 178 GHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYV 237
H + MHD ++S+++ + G L ++ WL+++ +E+G ++ R+KGI++ G + +YV
Sbjct: 240 HSHKSLMHDVTITSISLKT-GALQKEKFFSWLQQVTQEQGPNILRLKGIIAFHGDDDRYV 298
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QG+H L+G + W +EKR ++LVFIGR+LD L+ F+ C+
Sbjct: 299 IQGIHMLLEGQHQRPWRQNEKRESRLVFIGRSLDVEKLKTDFENCI 344
>gi|220924363|ref|YP_002499665.1| cobalamin synthesis protein P47K [Methylobacterium nodulans ORS
2060]
gi|219948970|gb|ACL59362.1| cobalamin synthesis protein P47K [Methylobacterium nodulans ORS
2060]
Length = 320
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/283 (38%), Positives = 165/283 (58%), Gaps = 23/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ G+FD I++ETTGLA PAPV +TF D+ V + +
Sbjct: 61 MNNGCICCTVRGDLIRIMDGLMKRR-GKFDAIIVETTGLADPAPVAQTFFVDQDVGEAAR 119
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K + L + EA Q+A+AD I+LNK DLV E L ++ +I+
Sbjct: 120 LDAVVTVADAKWLSERLKDAP------EAKNQIAFADVILLNKADLVDEAGLAAVERQIR 173
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + ++ +D VL +DL+RI + V+ EGHHH
Sbjct: 174 AINPSAVIHRTVQCNLPLDAVLDRKAFDLDRI---MTVEPEFL-----------EEGHHH 219
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+H D + SV+ G +D ++ W+ L + +G D+ R KGI+S +++VFQGV
Sbjct: 220 HHSDD--IQSVSARLPGAVDPNKFMPWISDLTQVQGPDILRCKGIVSFPDEPRRFVFQGV 277
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H LDG W + R +++VFIGRNLD +RKGF+ A
Sbjct: 278 HMILDGDLQGEWPAGDPRESRVVFIGRNLDPEKIRKGFEATKA 320
>gi|410942927|ref|ZP_11374668.1| hypothetical protein GfraN1_00725 [Gluconobacter frateurii NBRC
101659]
Length = 328
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 112/285 (39%), Positives = 171/285 (60%), Gaps = 28/285 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L +++ +FD I++ETTGLA PAPV +TF DE + + +
Sbjct: 69 MNNGCICCTVRGDLIRILGGLLRRRG-RFDGIIVETTGLADPAPVAQTFFVDENIREKTR 127
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+ + MQ L+E EAV Q+A+AD I+LNKIDL E + RI+
Sbjct: 128 LDAVVTVVDAFNVMQTLDESP------EAVSQIAFADVIVLNKIDLADEERRKEIVGRIR 181
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEV--HVDNSHCATHHHESAHGHHEGH 179
INA+A + A++G V + +L GG+DL+R S + ++N H
Sbjct: 182 QINAVAEIHEAQHGGVKLTDILDRGGFDLQRALSTMPDFLENDH---------------- 225
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
H H+ + S+++ + +D W+ L++E+G D+ R KGIL+ G EQ++ FQ
Sbjct: 226 ---HSHEEGIVSISLSVKEQIDQRRFQAWIGALLQEQGGDILRSKGILNFKGEEQRFAFQ 282
Query: 240 GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
VH DG + E + ++LVFIGRNL+ LR+GF+ C+A
Sbjct: 283 AVHMMADGDFIGPFRDGESQDSRLVFIGRNLNRPQLRRGFESCIA 327
>gi|390450253|ref|ZP_10235846.1| cobalamin synthesis protein, P47K [Nitratireductor aquibiodomus
RA22]
gi|389662601|gb|EIM74158.1| cobalamin synthesis protein, P47K [Nitratireductor aquibiodomus
RA22]
Length = 366
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 116/302 (38%), Positives = 177/302 (58%), Gaps = 27/302 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L ++ G+FD IV+ETTGLA PAPV +TF D+ V +
Sbjct: 73 MNNGCVCCTVRGDLVRVVEGLTRRT-GRFDAIVVETTGLADPAPVAQTFFMDDDVRAKTR 131
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + NEA +Q+A+AD +I+NK DLVT EL ++ I+
Sbjct: 132 LDAVVALVDAKHLPLRLKDS------NEAEDQIAFADVVIVNKTDLVTPEELATVEATIR 185
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-DSEVH-VDNSH----CATH-------- 167
IN MA + A+ V ++ VL G +DL+R+ D++ H +D+ H C
Sbjct: 186 AINPMASIHRAERAGVALNDVLDRGAFDLKRVLDNDPHFLDHGHPDHVCGPDCDHDHHHH 245
Query: 168 -----HHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYR 222
H H + +HD+ V S+++ + G +D + WLE+ + G ++ R
Sbjct: 246 DHEHGHDHDHGHGHHHGAASPIHDAGVKSLSLRA-GEMDPKKFLPWLEKTTQIDGPNILR 304
Query: 223 MKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
+KGI++ + ++V QGVH ++G + W DEKR +LVFIGR+LD L++ F+ C
Sbjct: 305 LKGIIAFADDPDRFVVQGVHMIVEGDHQRPWRDDEKRETRLVFIGRDLDTERLQRTFEAC 364
Query: 283 LA 284
LA
Sbjct: 365 LA 366
>gi|334319985|ref|YP_004556614.1| cobalamin synthesis protein P47K [Sinorhizobium meliloti AK83]
gi|334097724|gb|AEG55734.1| cobalamin synthesis protein P47K [Sinorhizobium meliloti AK83]
Length = 349
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 174/285 (61%), Gaps = 11/285 (3%)
Query: 2 VNNGCLCC--TVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+ NGC+CC VR DL+++L +L +K +FDHI++ET+GLA P PV F D+ + ++
Sbjct: 67 MKNGCICCFVDVRNDLIEVLQKLLARKD-KFDHILVETSGLADPTPVATAFFIDDEIGKH 125
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
V LDG++TLVD+KH QH+++ N+AV+Q+ ADRII+NKIDLV+E E+ L
Sbjct: 126 VTLDGIVTLVDAKHIGQHIDDPVLDGRDNQAVDQIVAADRIIINKIDLVSEGEIAPLERG 185
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGH 179
++ +N A + + YG VD+ +LG+ G+ + + H H + H
Sbjct: 186 MRKLNQTAEIVRSSYGRVDLSSILGISGFAPSYV-------AERAKLLDLDHHHHHDDHH 238
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
HH+H+HD+ VSS + V + D + D+L L+ E+G+D++R KGI++++G + +V Q
Sbjct: 239 HHHHLHDATVSSESFVFDRPFDQGRLTDYLAGLLREEGDDIFRTKGIIAIAGDPRFFVLQ 298
Query: 240 GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
VH +D P WG D KLVFIGRNLD AL +G + CLA
Sbjct: 299 AVHKLMDFRPDHVWGKDMP-YTKLVFIGRNLDRAALERGLECCLA 342
>gi|16263881|ref|NP_436673.1| hypothetical protein SM_b20133 [Sinorhizobium meliloti 1021]
gi|15140005|emb|CAC48533.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti 1021]
Length = 349
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 173/285 (60%), Gaps = 11/285 (3%)
Query: 2 VNNGCLCC--TVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+ NGC+CC VR DL+++L +L +K +FDHI++ET+GLA P PV F D+ + ++
Sbjct: 67 MKNGCICCFVDVRNDLIEVLQKLLARKD-KFDHILVETSGLADPTPVATAFFIDDEIGKH 125
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
V LDG++TLVD+KH QH+++ N+AV+Q+ ADRII+NKIDLV+E E+ L
Sbjct: 126 VTLDGIVTLVDAKHIGQHIDDPVLDGRDNQAVDQIVAADRIIINKIDLVSEGEIAPLERG 185
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGH 179
++ +N A + + YG VD+ +LG+ G+ + + H H H
Sbjct: 186 MRKLNQTAEIVRSSYGRVDLSSILGISGFAPSYV-------AERAKLLDLDHHHHHDHHH 238
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
HH+H+HD+ VSS + V + D + D+L L+ E+G+D++R KGI++++G + +V Q
Sbjct: 239 HHHHLHDATVSSESFVFDRPFDQGRLTDYLAGLLREEGDDIFRTKGIIAIAGDPRFFVLQ 298
Query: 240 GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
VH +D P WG D KLVFIGRNLD AL +G + CLA
Sbjct: 299 AVHKLMDFRPDHVWGKDMP-YTKLVFIGRNLDRAALERGLECCLA 342
>gi|414341444|ref|YP_006982965.1| hypothetical protein B932_0426 [Gluconobacter oxydans H24]
gi|411026779|gb|AFW00034.1| hypothetical protein B932_0426 [Gluconobacter oxydans H24]
gi|453330725|dbj|GAC87471.1| cobalamin synthesis protein CobW [Gluconobacter thailandicus NBRC
3255]
Length = 328
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 172/285 (60%), Gaps = 28/285 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L +++ +FD I++ETTGLA PAPV +TF DE + + +
Sbjct: 69 MNNGCICCTVRGDLIRILGGLLRRRG-RFDGIIVETTGLADPAPVAQTFFVDENIREKAR 127
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+ + MQ L+E EAV Q+A+AD I+LNKIDL E + RI+
Sbjct: 128 LDAVVTVVDAFNVMQTLDESP------EAVSQLAFADVIVLNKIDLADEERRKEIVARIR 181
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEV--HVDNSHCATHHHESAHGHHEGH 179
INA+A + A++G V + +L GG+DL+R S + ++N H H H EG
Sbjct: 182 QINAVAEIHEAQHGGVKLTDILDRGGFDLQRALSTMPDFLENDH---------HSHEEG- 231
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
+ S+++ + +D W+ L++EKG D+ R KGIL+ G +Q++ FQ
Sbjct: 232 ---------IVSISLSVKEPIDQRRFQAWIGALLQEKGGDILRSKGILNFKGEDQRFAFQ 282
Query: 240 GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
VH DG + E R ++LVFIGR+L+ LR+GF+ C+A
Sbjct: 283 AVHMMADGDFIGPFREGESRDSRLVFIGRDLNRPQLRRGFESCIA 327
>gi|398829284|ref|ZP_10587484.1| putative GTPase, G3E family [Phyllobacterium sp. YR531]
gi|398218142|gb|EJN04659.1| putative GTPase, G3E family [Phyllobacterium sp. YR531]
Length = 370
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 182/304 (59%), Gaps = 29/304 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 75 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIIVETTGLADPVPVAQTFFMDDDVRKKTA 133
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD ++LNK DLV+ EL ++ I+
Sbjct: 134 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLLNKTDLVSPDELAAVEATIR 187
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVH-VDNSH----CAT--------- 166
IN A V + VD+ VL G +DL+R ++S+ H +D+ H C
Sbjct: 188 TINPHAVVHRTERADVDLAKVLDRGAFDLQRALESDPHFLDHDHPDHACGPDCDHNHVHD 247
Query: 167 ------HHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDL 220
H S H HH H + +HD V SV++ + G L+ D+ W++++ +E+G ++
Sbjct: 248 HEHHHHDHDHSHHDHHGHDHASPIHDVTVESVSLRT-GELNADKFFPWIQKVTQEQGPNI 306
Query: 221 YRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
R+KGIL+ Q+YV QGVH ++G + W +EKR ++LVFIGR LD+ AL+ G +
Sbjct: 307 LRLKGILAFKDDHQRYVIQGVHMIIEGDHQRDWKENEKRDSRLVFIGRELDQAALKAGLE 366
Query: 281 GCLA 284
CLA
Sbjct: 367 SCLA 370
>gi|254501105|ref|ZP_05113256.1| CobW/P47K family protein [Labrenzia alexandrii DFL-11]
gi|222437176|gb|EEE43855.1| CobW/P47K family protein [Labrenzia alexandrii DFL-11]
Length = 355
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 115/309 (37%), Positives = 171/309 (55%), Gaps = 47/309 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++ + L K+K G FD I++ETTG+A PAPV +TF D+ V K
Sbjct: 67 MNNGCICCTVRGDLIRTVQNLMKRK-GAFDAIIVETTGVADPAPVAQTFFMDDDVRAAAK 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ +VD++H +Q L + + EA +QVA+AD I++NK DLV+ EL ++ RI+
Sbjct: 126 LDAVVAVVDARHVLQRLEDTQ------EAEDQVAFADVILINKTDLVSADELSAVEARIR 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + ++ VD+ VL G +DL+RI + H HGHH H
Sbjct: 180 SINPYAVLHHSERCGVDIAKVLDRGAFDLDRI----------LSLDPHFLEHGHHA---H 226
Query: 182 NHMHDS--------------------------AVSSVTIVSEGTLDLDEVDDWLERLIEE 215
D +V S+++ + G LD + W+ ++ +
Sbjct: 227 ECSPDCDHDHDHHHHDHSHDHGHHHHGHEETHSVKSISLTA-GDLDPEMFFPWINQVTQI 285
Query: 216 KGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETAL 275
+G ++ RMKGIL+ G Q+YV QGVH ++G + W DE R ++LVFIGR+L+ L
Sbjct: 286 QGPNILRMKGILAFKGDPQRYVIQGVHMIVEGDHQRDWKSDEPRESRLVFIGRDLNWDVL 345
Query: 276 RKGFKGCLA 284
+ FK C A
Sbjct: 346 KANFKACAA 354
>gi|17988653|ref|NP_541286.1| zinc transporter [Brucella melitensis bv. 1 str. 16M]
gi|260565032|ref|ZP_05835517.1| cobalamin synthesis protein/P47K [Brucella melitensis bv. 1 str.
16M]
gi|265990277|ref|ZP_06102834.1| cobalamin synthesis protein P47K [Brucella melitensis bv. 1 str.
Rev.1]
gi|294853942|ref|ZP_06794614.1| zinc transporter [Brucella sp. NVSL 07-0026]
gi|17984459|gb|AAL53550.1| low affinity zinc transport membrane protein [Brucella melitensis
bv. 1 str. 16M]
gi|260152675|gb|EEW87768.1| cobalamin synthesis protein/P47K [Brucella melitensis bv. 1 str.
16M]
gi|263000946|gb|EEZ13636.1| cobalamin synthesis protein P47K [Brucella melitensis bv. 1 str.
Rev.1]
gi|294819597|gb|EFG36597.1| zinc transporter [Brucella sp. NVSL 07-0026]
Length = 372
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 115/310 (37%), Positives = 174/310 (56%), Gaps = 35/310 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V
Sbjct: 71 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRAKTG 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL ++ ++
Sbjct: 130 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPEELAAVEATVR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHHES 171
IN A + + S+ +D VL G +DL+R+ D HV C HH
Sbjct: 184 AINPHAIIHRTERASIPLDRVLDRGAFDLKRVLDNDPHFLDHDDPDHVCGPDCDHDHHHH 243
Query: 172 AH--------------GHHEGHHHNH---MHDSAVSSVTIVSEGTLDLDEVDDWLERLIE 214
H G H H+H +HD V SV++ + G +D + W++ + +
Sbjct: 244 GHDHHHHDHHDHDHVCGPDCDHDHDHASPIHDVTVKSVSLRT-GEIDPAKFFPWIQNITQ 302
Query: 215 EKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETA 274
+G ++ R+KGI++ +YV QGVH ++G +AW P+EK ++LVFIGR LD A
Sbjct: 303 TQGPNILRLKGIIAFKDDPDRYVVQGVHMIIEGDHQRAWKPEEKHESRLVFIGRELDPAA 362
Query: 275 LRKGFKGCLA 284
L+ GF+ C A
Sbjct: 363 LKAGFENCRA 372
>gi|395766254|ref|ZP_10446830.1| hypothetical protein MCO_01706 [Bartonella sp. DB5-6]
gi|395409497|gb|EJF76086.1| hypothetical protein MCO_01706 [Bartonella sp. DB5-6]
Length = 342
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 110/283 (38%), Positives = 176/283 (62%), Gaps = 10/283 (3%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L ++ +FD I++ETTGLA P PV +TF D+ V +
Sbjct: 67 MNNGCVCCTVRGDLIRILESLMQRSH-RFDAIILETTGLADPIPVAQTFFMDDTVHEKTT 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI +VD+KH L + + EA +Q+A++D I+LNKIDLV+ E I
Sbjct: 126 LDSVIAVVDAKHFPLQLKKSR------EAEDQIAFSDIILLNKIDLVSAEERAHAQSLIL 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVH-VDNSHCATHHHESAHGHHEGH 179
IN A + + ++ ++ +L G +DL+R +D++ H +D+ H + HHE H
Sbjct: 180 AINPRATLYTTERANIPLNELLNRGSFDLQRTLDNDPHFLDHQHSNHVCGPDCNHHHEHH 239
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
H + +HD ++S+++ + L ++ WL+++ +++G D+ R+KGI++ G + +YV Q
Sbjct: 240 HISTIHDITITSISLKTSA-LQPEKFFPWLQQVTQQQGPDILRLKGIIAFQGDDDRYVIQ 298
Query: 240 GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
G+H L+G + W DEKR ++LVFIGRNLD L+ GFK C
Sbjct: 299 GIHMILEGQHQRPWREDEKRESRLVFIGRNLDPEKLKTGFKNC 341
>gi|319404536|emb|CBI78140.1| putative cobalamin synthesis protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 344
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 173/286 (60%), Gaps = 12/286 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L ++ +FD I+IETTG+A P PV +TF D+ V
Sbjct: 67 MNNGCVCCTVRGDLIRVLESLMQRS-NRFDAIIIETTGIANPTPVAQTFFMDDTVRDKTA 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VITL+D+KH L E + EA +Q+A+AD I+LNKIDLV+ E + I
Sbjct: 126 LDSVITLIDAKHLPLQLKESR------EAEDQIAFADIILLNKIDLVSAEERAHIESLIY 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-DSEVHVDNSHCATH---HHESAHGHHE 177
IN+ A + + ++ ++ +L +DL+RI +++ H N H HH
Sbjct: 180 TINSNAIIYATERANIPLNKILNRSSFDLQRILENDPHFLNHENPDHVCSPECDHEHHHG 239
Query: 178 GHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYV 237
H + MHD ++S+++ + G L ++ WL+++ +E+G ++ R+KGI++ G + +YV
Sbjct: 240 HSHKSLMHDVTITSISLKT-GALQKEKFFSWLQQVTQEQGPNILRLKGIIAFHGDDDRYV 298
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QG+H L+G + W +EKR ++LVFIGR+LD L+ F+ C+
Sbjct: 299 IQGIHMLLEGQHQRPWRQNEKRESRLVFIGRSLDAEKLKTDFENCI 344
>gi|187921764|ref|YP_001890796.1| cobalamin synthesis protein P47K [Burkholderia phytofirmans PsJN]
gi|187720202|gb|ACD21425.1| cobalamin synthesis protein P47K [Burkholderia phytofirmans PsJN]
Length = 360
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 177/288 (61%), Gaps = 7/288 (2%)
Query: 2 VNNGCLCC--TVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+ NGC+CC VR DLV+++ L ++ + DHI++ET+GLA P PV +TF D+ +++
Sbjct: 70 MTNGCVCCVGAVREDLVRIVRMLVERPD-RLDHIIVETSGLADPYPVAQTFFLDDPIAKQ 128
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
V LD V+T+VD+KH HL+++ N+AV+Q+ ADRI++NK+DLV ++ SLT+R
Sbjct: 129 VTLDAVVTMVDAKHIAAHLDDLVLDGSDNQAVDQIVCADRIVINKVDLVGPDDIASLTQR 188
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSE---VHVDNSHCATHHHESAHGHH 176
I+ +NA A + + Y +D+ +LGVG + +I E +H + HE H HH
Sbjct: 189 IRGLNATAEIVESSYAQIDLGKILGVGANEFSQILVETDGLHEEEHAHGHEEHEHEHAHH 248
Query: 177 EGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQY 236
+ H +H HD +VSSV I + +DLD + WL L +L+RMKGIL+V G +Y
Sbjct: 249 DDDHADHQHDESVSSVGIEVDADIDLDALQAWLAELRNSDAANLFRMKGILAVQGQSHRY 308
Query: 237 VFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
V QGVH+ ++ + WG E R ++VFIGR+LD AL F CLA
Sbjct: 309 VLQGVHNVIELRAAQVWGS-EPRSCRIVFIGRDLDRAALTDRFHACLA 355
>gi|306841097|ref|ZP_07473817.1| cobalamin synthesis protein P47K [Brucella sp. BO2]
gi|306288872|gb|EFM60181.1| cobalamin synthesis protein P47K [Brucella sp. BO2]
Length = 373
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/311 (36%), Positives = 174/311 (55%), Gaps = 36/311 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V
Sbjct: 71 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRAKTG 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL ++ ++
Sbjct: 130 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPEELAAVEATVR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHHES 171
IN A + + S+ +D VL G +DL+R+ D HV C HH
Sbjct: 184 AINPHAIIHRTERASIPLDRVLDRGAFDLKRVLDNDPHFLDHDDPDHVCGPDCDHDHHHG 243
Query: 172 AH---------------GHHEGHHHNH---MHDSAVSSVTIVSEGTLDLDEVDDWLERLI 213
H G H H+H +HD V SV++ + G +D + W++ +
Sbjct: 244 HHHHGHDHHHHDHDHVCGPDCDHDHDHASPIHDVTVKSVSLRT-GEIDPAKFFPWIQNIT 302
Query: 214 EEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDET 273
+ +G ++ R+KGI++ +YV QGVH ++G +AW P+EK ++LVFIGR LD
Sbjct: 303 QTQGPNILRLKGIIAFKDDPDRYVVQGVHMIIEGDHQRAWKPEEKHESRLVFIGRELDPA 362
Query: 274 ALRKGFKGCLA 284
AL+ GF+ C A
Sbjct: 363 ALKAGFENCRA 373
>gi|188580984|ref|YP_001924429.1| cobalamin synthesis protein P47K [Methylobacterium populi BJ001]
gi|179344482|gb|ACB79894.1| cobalamin synthesis protein P47K [Methylobacterium populi BJ001]
Length = 329
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/283 (39%), Positives = 168/283 (59%), Gaps = 23/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ G+FD I++ETTGLA PAPV +TF D+ V + +
Sbjct: 70 MNNGCVCCTVRGDLIRIMDGLVKRR-GKFDAIIVETTGLADPAPVAQTFFVDQDVGEAAR 128
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLV+ +L + +I+
Sbjct: 129 LDAVVTVADAKWLTDRLADAP------EAKNQIAFADVILLNKSDLVSGEDLDRVEGQIR 182
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A V + ++ +D VL +DL RI + V+ EGHHH
Sbjct: 183 AINPWAKVHRTERCAIPLDQVLDRNAFDLSRI---LDVEPDFL-----------EEGHHH 228
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD + SV+ +G +D ++ W+ L + +G D+ R KGI++ +++VFQGV
Sbjct: 229 --HHDEQMQSVSAKIDGPVDPEKFMPWISNLTQVQGPDILRCKGIVAFPDEPKRFVFQGV 286
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H LDG WG DE R++++VFIGRNLD A+R+GF C A
Sbjct: 287 HMILDGDVQGEWGADEPRVSRVVFIGRNLDPEAIREGFFACKA 329
>gi|386722969|ref|YP_006189295.1| hypothetical protein B2K_12490 [Paenibacillus mucilaginosus K02]
gi|384090094|gb|AFH61530.1| hypothetical protein B2K_12490 [Paenibacillus mucilaginosus K02]
Length = 335
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 169/289 (58%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL--AKK----KQGQFDHIVIETTGLAKPAPVIETFCTDEL 55
+NNGC+CCTVRGDL+++L +L AK+ ++G FD ++IETTGLA PAPV +TF DE
Sbjct: 69 MNNGCICCTVRGDLIRILGELMDAKRAGDPRKGNFDRVLIETTGLADPAPVAQTFFVDEE 128
Query: 56 VSQYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGS 115
++++ +LD ++T+VD+KHA HL+E +EA EQVA+AD ++LNK DLV E L
Sbjct: 129 MAEFYRLDAIVTVVDAKHADMHLDEG------HEAQEQVAFADVLLLNKTDLVDEESLQK 182
Query: 116 LTERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGH 175
L +R++ +N + + +++D VLG+ ++LE+ ++ +D HE
Sbjct: 183 LEKRLRAMNPAGRIYRTRRSQIELDKVLGIEAFELEK---KLELDPGFLEEEDHEHD--- 236
Query: 176 HEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQ 235
V S+ E LDL +++D+L + E G D +R KG+L + E++
Sbjct: 237 -----------DDVVSLVFREERPLDLKKLEDFLGVWLSEHGVDTFRYKGVLHIKDVEER 285
Query: 236 YVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
VFQG+H + W E R ++ V IGRNLDE R+ F GC+A
Sbjct: 286 VVFQGIHMLFTSDSDRYWKEGEVRRSEFVIIGRNLDEAWFREQFAGCVA 334
>gi|338740379|ref|YP_004677341.1| CobW/P47K family protein [Hyphomicrobium sp. MC1]
gi|337760942|emb|CCB66775.1| CobW/P47K family protein [Hyphomicrobium sp. MC1]
Length = 329
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 161/282 (57%), Gaps = 25/282 (8%)
Query: 3 NNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKL 62
NNGCLCCTVRGDL+ L +L +++ + I+IETTGLA PAPV TF + V + ++L
Sbjct: 72 NNGCLCCTVRGDLIDTLQRL--RQRAELQGILIETTGLADPAPVASTFFVADEVKRSIRL 129
Query: 63 DGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIKH 122
D +T+VD+ + +L + NEA+EQVA++D +++NK+DLV+ +L ++ R++
Sbjct: 130 DAFVTVVDAVNIEINLQQS------NEAIEQVAFSDIVLVNKVDLVSPEQLKAVEARVRA 183
Query: 123 INAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHHN 182
+N +A + +D+D V+GVG +DL + ++ VD H HE
Sbjct: 184 LNPLAKIHYTTNSEIDIDQVIGVGAFDLVQ---KLDVDPQFLDDHEHE------------ 228
Query: 183 HMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVH 242
HD++V S + +DL++ WL + + +GEDLYR KGI + G ++ VFQ V
Sbjct: 229 --HDASVGSFILQESRPIDLNKFSLWLNDMAQTRGEDLYRTKGIFNARGFRERIVFQSVR 286
Query: 243 STLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
P + W DE R+++ V IG+NL+ GF C+A
Sbjct: 287 MLTTMRPDRLWLDDESRMSQFVVIGKNLNRAEFAAGFARCVA 328
>gi|413960782|ref|ZP_11400011.1| cobalamin synthesis protein P47K [Burkholderia sp. SJ98]
gi|413931496|gb|EKS70782.1| cobalamin synthesis protein P47K [Burkholderia sp. SJ98]
Length = 342
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/287 (38%), Positives = 172/287 (59%), Gaps = 23/287 (8%)
Query: 2 VNNGCLCC--TVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+ NGC+CC VR DLV+++ L ++ + + DHI++ET+GLA P PV +TF D+ ++Q
Sbjct: 70 MTNGCVCCVGAVREDLVRIVRMLVERPE-RLDHIIVETSGLADPYPVAQTFFIDDPIAQR 128
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
V LD V+T+VD+KH HL+++ N+AV+Q+ ADRI++NK+DLVT ++ SL ER
Sbjct: 129 VTLDAVVTMVDAKHIAAHLDDLVLDGRDNQAVDQIVCADRIVVNKVDLVTAQDIASLKER 188
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLER--IDSEVHVDNSHCATHHHESAHGHHE 177
++ +NA A + + + +D+ +LGVG + + ++++ D+ H HH ES
Sbjct: 189 LRGLNATAEIVESSFAQIDLHTILGVGANEFAQQLVEADDDHDDHHDDHHHDES------ 242
Query: 178 GHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYV 237
VSSV I + ++LD + WL L +L+RMKGI +V G +YV
Sbjct: 243 -----------VSSVGIEVDADIELDALQAWLAELRASDATNLFRMKGIFAVKGQPYRYV 291
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QGVH ++ +AWG E R +++VFIGR LD AL + F CLA
Sbjct: 292 LQGVHDIIELRAAQAWGY-EPRSSRIVFIGRELDRAALTERFHACLA 337
>gi|412991074|emb|CCO15919.1| predicted protein [Bathycoccus prasinos]
Length = 545
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 124/158 (78%), Gaps = 1/158 (0%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
++NNGCLCC+VRGDLV+ML +L ++G+FDH+VIETTGLA PAP+I+TF + + +
Sbjct: 190 LLNNGCLCCSVRGDLVEMLTKLHDTRKGEFDHVVIETTGLANPAPIIQTFYLEHALLENF 249
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVT-ETELGSLTER 119
++DGV+TLVD+KHA HL+EVKP VVNEA+EQ+A+ADRI+LNK DLVT ETEL L R
Sbjct: 250 RVDGVVTLVDAKHAHLHLDEVKPDGVVNEALEQIAFADRIVLNKTDLVTDETELNGLHRR 309
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEV 157
I+ INA+A ++ A V +DF LG+GG+DLE++ V
Sbjct: 310 IREINALAEIQRATKAKVPLDFTLGIGGFDLEKVQEAV 347
>gi|306846192|ref|ZP_07478754.1| cobalamin synthesis protein P47K [Brucella inopinata BO1]
gi|306273443|gb|EFM55304.1| cobalamin synthesis protein P47K [Brucella inopinata BO1]
Length = 376
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/314 (36%), Positives = 174/314 (55%), Gaps = 39/314 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V
Sbjct: 71 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRAKTG 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL ++ ++
Sbjct: 130 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPEELAAVEATVR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHHES 171
IN A + + S+ +D VL G +DL+R+ D HV C HH
Sbjct: 184 AINPHAIIHRTERASIPLDRVLDRGAFDLKRVLDNDPHFLDHDDPDHVCGPDCDHDHHHG 243
Query: 172 AH------------------GHHEGHHHNH---MHDSAVSSVTIVSEGTLDLDEVDDWLE 210
H G H H+H +HD V SV++ + G +D + W++
Sbjct: 244 HHHHGHDHHHHDHHDHDHVCGPDCDHDHDHASPIHDVTVKSVSLRT-GEIDPAKFFPWIQ 302
Query: 211 RLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNL 270
+ + +G ++ R+KGI++ +YV QGVH ++G +AW P+EK ++LVFIGR L
Sbjct: 303 NITQTQGPNILRLKGIIAFKDDPDRYVVQGVHMIIEGDHQRAWKPEEKHESRLVFIGREL 362
Query: 271 DETALRKGFKGCLA 284
D AL+ GF+ C A
Sbjct: 363 DPAALKAGFENCRA 376
>gi|389693614|ref|ZP_10181708.1| putative GTPase, G3E family [Microvirga sp. WSM3557]
gi|388587000|gb|EIM27293.1| putative GTPase, G3E family [Microvirga sp. WSM3557]
Length = 320
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/283 (38%), Positives = 164/283 (57%), Gaps = 23/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K+K G+FD I++ETTGLA PAPV +TF D+ VS +
Sbjct: 61 MNNGCICCTVRGDLIRILDGLMKRK-GKFDAIIVETTGLADPAPVAQTFFMDQDVSDTAR 119
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD IILNKIDLV+ EL + RI+
Sbjct: 120 LDAVVTVADAKWLSDRLKDAP------EAKNQIAFADVIILNKIDLVSAGELEEVEARIR 173
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A V + ++ + VL +DL+RI + ++ HH
Sbjct: 174 AINPYAKVHRTQNCAIPISEVLDRKAFDLDRI---IEIEPDFLEEGHHHHHD-------- 222
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+ SV++ +G +D ++ W+ L + +G ++ R KGI++ +++VFQGV
Sbjct: 223 -----EEMQSVSVAIDGEVDPEKFMPWISNLTQVEGPNILRCKGIVAFPNEPKRFVFQGV 277
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H LDG W P EK +K+VFIGR+L+E A+++GF C A
Sbjct: 278 HMILDGDVQGEWKPGEKHTSKVVFIGRDLNEKAIKEGFLACAA 320
>gi|261322789|ref|ZP_05961986.1| cobalamin synthesis protein P47K [Brucella neotomae 5K33]
gi|261298769|gb|EEY02266.1| cobalamin synthesis protein P47K [Brucella neotomae 5K33]
Length = 377
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/315 (36%), Positives = 174/315 (55%), Gaps = 40/315 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V
Sbjct: 71 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRAKTG 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL ++ ++
Sbjct: 130 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPEELAAVEATVR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHHES 171
IN A + + S+ +D VL G +DL+R+ D HV C HH
Sbjct: 184 AINPHAIIHRTERASIPLDRVLDRGAFDLKRVLDNDPHFLDHDDPDHVCGPDCDHDHHHH 243
Query: 172 AH-------------------GHHEGHHHNH---MHDSAVSSVTIVSEGTLDLDEVDDWL 209
H G H H+H +HD V SV++ + G +D + W+
Sbjct: 244 GHHHHGHDHHHHDHHDHDHVCGPDCDHDHDHASPIHDVTVKSVSLRT-GEIDPAKFFPWI 302
Query: 210 ERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRN 269
+ + + +G ++ R+KGI++ +YV QGVH ++G +AW P+EK ++LVFIGR
Sbjct: 303 QNITQTQGPNILRLKGIIAFKDDPDRYVVQGVHMIIEGDHQRAWKPEEKHESRLVFIGRE 362
Query: 270 LDETALRKGFKGCLA 284
LD AL+ GF+ C A
Sbjct: 363 LDPAALKAGFENCRA 377
>gi|261216428|ref|ZP_05930709.1| cobalamin synthesis protein P47K [Brucella abortus bv. 3 str.
Tulya]
gi|260918035|gb|EEX84896.1| cobalamin synthesis protein P47K [Brucella abortus bv. 3 str.
Tulya]
Length = 377
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/315 (36%), Positives = 174/315 (55%), Gaps = 40/315 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V
Sbjct: 71 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRAKTG 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL ++ ++
Sbjct: 130 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPEELAAVEATVR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHHES 171
IN A + + S+ +D VL G +DL+R+ D HV C HH
Sbjct: 184 AINPHAIIHRTERASIPLDRVLDRGAFDLKRVLDNDPHFLDHDDPDHVCGPDCDHDHHHH 243
Query: 172 AH-------------------GHHEGHHHNH---MHDSAVSSVTIVSEGTLDLDEVDDWL 209
H G H H+H +HD V SV++ + G +D + W+
Sbjct: 244 GHHHHGHDHHHHDHHDHDHVCGPDCDHDHDHASPIHDVTVKSVSLRT-GEIDPAKFFPWI 302
Query: 210 ERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRN 269
+ + + +G ++ R+KGI++ +YV QGVH ++G +AW P+EK ++LVFIGR
Sbjct: 303 QNITQTQGPNILRLKGIIAFKDDPDRYVVQGVHMIIEGDHQRAWKPEEKHESRLVFIGRE 362
Query: 270 LDETALRKGFKGCLA 284
LD AL+ GF+ C A
Sbjct: 363 LDPAALKAGFENCRA 377
>gi|340028464|ref|ZP_08664527.1| cobalamin synthesis protein/P47K [Paracoccus sp. TRP]
Length = 341
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/285 (37%), Positives = 159/285 (55%), Gaps = 11/285 (3%)
Query: 2 VNNGCLCCTV--RGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+ NGC+CC R DL++++ QL + + + D I+IET+GLA P PV +TF D+ +
Sbjct: 65 MTNGCVCCVAEARDDLLRVIRQLLARPE-RLDRIIIETSGLADPYPVAQTFFLDDPIRAE 123
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
LDGVI LVD KH ++HL++ N+AV+Q+ ADRI+LNKIDL E E+ + R
Sbjct: 124 TNLDGVIALVDVKHILRHLDDTLVEAHDNQAVDQIVCADRIVLNKIDLAAEGEIAEVEAR 183
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGH 179
+ +N A + + + +++D +LG+G +D R + + G HE
Sbjct: 184 VSRLNETAEIVRSSHARIELDKILGLGAFDRTRRLAADIHHDHAHHHAAPWDKDGDHE-- 241
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
HD++V+SV I G +D + W+ + ++ DL+RMKGI S+ G + YV
Sbjct: 242 -----HDASVTSVGIELPGHMDPAAMARWVHEIRQQDNSDLFRMKGIFSIQGDDYCYVLH 296
Query: 240 GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
GVH ++ P W DE R NK+VFIGRNLD AL+ C A
Sbjct: 297 GVHDQIEFRPNHPWA-DEPRCNKMVFIGRNLDRAALQARLAQCRA 340
>gi|337746451|ref|YP_004640613.1| hypothetical protein KNP414_02182 [Paenibacillus mucilaginosus
KNP414]
gi|336297640|gb|AEI40743.1| hypothetical protein KNP414_02182 [Paenibacillus mucilaginosus
KNP414]
Length = 335
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 168/289 (58%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL--AKK----KQGQFDHIVIETTGLAKPAPVIETFCTDEL 55
+NNGC+CCTVRGDL+++L +L AK+ ++G FD ++IETTGLA PAPV +TF DE
Sbjct: 69 MNNGCICCTVRGDLIRILGELMDAKRAGDPRKGNFDRVLIETTGLADPAPVAQTFFVDEE 128
Query: 56 VSQYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGS 115
++ + +LD ++T+VD+KHA HL+E +EA EQVA+AD ++LNK DLV E L
Sbjct: 129 MADFYRLDAIVTVVDAKHADMHLDEG------HEAQEQVAFADVLLLNKTDLVDEESLQK 182
Query: 116 LTERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGH 175
L +R++ +N + + +++D VLG+ ++LE+ ++ +D HE
Sbjct: 183 LEKRLRAMNPAGRIYRTRRSQIELDKVLGIEAFELEK---KLELDPGFLEEEDHEHD--- 236
Query: 176 HEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQ 235
V S+ E LDL +++D+L + E G D +R KG+L + E++
Sbjct: 237 -----------DDVVSLVFREERPLDLKKLEDFLGVWLSEHGVDTFRYKGVLHIKDVEER 285
Query: 236 YVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
VFQG+H + W E R ++ V IGRNLDE R+ F GC+A
Sbjct: 286 VVFQGIHMLFTSDSDRYWKEGEVRRSEFVIIGRNLDEAWFREQFAGCVA 334
>gi|163851205|ref|YP_001639248.1| cobalamin synthesis protein P47K [Methylobacterium extorquens PA1]
gi|218530073|ref|YP_002420889.1| cobalamin synthesis protein P47K [Methylobacterium extorquens CM4]
gi|240138359|ref|YP_002962831.1| GTPase, CobW-like cobalamin biosynthesis protein [Methylobacterium
extorquens AM1]
gi|254560903|ref|YP_003067998.1| GTPase, CobW-like cobalamin biosynthesis protein [Methylobacterium
extorquens DM4]
gi|418061343|ref|ZP_12699208.1| cobalamin synthesis protein P47K [Methylobacterium extorquens DSM
13060]
gi|163662810|gb|ABY30177.1| cobalamin synthesis protein P47K [Methylobacterium extorquens PA1]
gi|218522376|gb|ACK82961.1| cobalamin synthesis protein P47K [Methylobacterium extorquens CM4]
gi|240008328|gb|ACS39554.1| putative GTPase, putative CobW-like cobalamin biosynthesis protein
[Methylobacterium extorquens AM1]
gi|254268181|emb|CAX24088.1| putative GTPase, putative CobW-like cobalamin biosynthesis protein
[Methylobacterium extorquens DM4]
gi|373565099|gb|EHP91163.1| cobalamin synthesis protein P47K [Methylobacterium extorquens DSM
13060]
Length = 328
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 111/281 (39%), Positives = 167/281 (59%), Gaps = 23/281 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ G+FD I++ETTGLA PAPV +TF D+ V + +
Sbjct: 69 MNNGCVCCTVRGDLIRIMDGLVKRR-GKFDAIIVETTGLADPAPVAQTFFVDQDVGEAAR 127
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K L + EA Q+A+AD I+LNK DLV+ +L + +I+
Sbjct: 128 LDAVVTVADAKWLTDRLADAP------EAKNQIAFADVILLNKSDLVSGADLDRVEGQIR 181
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + + ++ +D VL +DL RI + V+ EGHHH
Sbjct: 182 AINPWAKIHRTERCAIPLDQVLDRNAFDLARI---LDVEPDFL-----------EEGHHH 227
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD + SV+ +G +D ++ W+ L + +G D+ R KGI++ +++VFQGV
Sbjct: 228 --HHDEQMQSVSAKIDGPVDPEKFMPWISNLTQVQGPDILRCKGIVAFPDEPKRFVFQGV 285
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
H LDG WG DE R++++VFIGRNLD A+R+GF C
Sbjct: 286 HMILDGDVQGDWGADEPRVSRVVFIGRNLDPEAIREGFFAC 326
>gi|379720368|ref|YP_005312499.1| hypothetical protein PM3016_2462 [Paenibacillus mucilaginosus 3016]
gi|378569040|gb|AFC29350.1| hypothetical protein PM3016_2462 [Paenibacillus mucilaginosus 3016]
Length = 335
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 168/289 (58%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL--AKK----KQGQFDHIVIETTGLAKPAPVIETFCTDEL 55
+NNGC+CCTVRGDL+++L +L AK+ ++G FD ++IETTGLA PAPV +TF DE
Sbjct: 69 MNNGCICCTVRGDLIRILGELMDAKRAGDPRKGNFDRVLIETTGLADPAPVAQTFFVDEE 128
Query: 56 VSQYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGS 115
++ + +LD ++T+VD+KHA HL+E +EA EQVA+AD ++LNK DLV E L
Sbjct: 129 MADFYRLDAIVTVVDAKHADMHLDEG------HEAQEQVAFADVLLLNKTDLVDEESLQK 182
Query: 116 LTERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGH 175
L +R++ +N + + +++D VLG+ ++LE+ ++ +D HE
Sbjct: 183 LEKRLRAMNPAGRIYRTRRSRIELDKVLGIEAFELEK---KLELDPGFLEEEDHEHD--- 236
Query: 176 HEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQ 235
V S+ E LDL +++D+L + E G D +R KG+L + E++
Sbjct: 237 -----------DDVVSLVFREERPLDLKKLEDFLGVWLSEHGVDTFRYKGVLHIKDVEER 285
Query: 236 YVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
VFQG+H + W E R ++ V IGRNLDE R+ F GC+A
Sbjct: 286 VVFQGIHMLFTSDSDRYWKEGEVRRSEFVIIGRNLDEAWFREQFAGCVA 334
>gi|389877183|ref|YP_006370748.1| cobalamin synthesis protein, P47K [Tistrella mobilis KA081020-065]
gi|388527967|gb|AFK53164.1| cobalamin synthesis protein, P47K [Tistrella mobilis KA081020-065]
Length = 351
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 175/299 (58%), Gaps = 23/299 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGCLCCTVRGDL++++ L K+ G D I+IETTGLA+PAPV +TF D ++ +
Sbjct: 60 MNNGCLCCTVRGDLIRIVGALLKRS-GNLDGILIETTGLAEPAPVAQTFFLDRDIASRTQ 118
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDGV+T+VD+ + + L + EA +QVA+AD I+LNK DLV L + I+
Sbjct: 119 LDGVVTVVDALNLEKRLVDAP------EAAQQVAFADIIVLNKTDLVDADMLARVEATIR 172
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER---IDSEVHVDNSHCATHHHESAHGHHEG 178
+N +A + + +V +D +LG G +DL+R ++ E + H H+ H H G
Sbjct: 173 RLNPLAQIHRTERSNVALDAILGRGAFDLKRALALEPEFLTEGDGHHHHDHDHGHDHGHG 232
Query: 179 HHHN-------------HMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKG 225
HH + H HD ++SS+++ ++ LD + WL L+ KG+D+ R KG
Sbjct: 233 HHDHDHDHTPATPGVLAHDHDLSISSLSLTTDQPLDKTLFESWLSMLLMTKGQDILRFKG 292
Query: 226 ILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
IL+ +G +++V QGVH +G + W E R ++LV IGR+LD L++GF G +A
Sbjct: 293 ILNFAGQNRRFVLQGVHMISEGTLDRPWAEGETRRSRLVMIGRDLDAAELKRGFDGNVA 351
>gi|381150117|ref|ZP_09861986.1| putative GTPase, G3E family [Methylomicrobium album BG8]
gi|380882089|gb|EIC27966.1| putative GTPase, G3E family [Methylomicrobium album BG8]
Length = 333
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 165/284 (58%), Gaps = 26/284 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQ---GQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCTVRGDLV++L +L+++++ F+ ++IETTGLA PAPV +TF D+ +++
Sbjct: 67 MNNGCICCTVRGDLVRILGELSERRENGEAGFERVIIETTGLADPAPVAQTFFVDQDIAE 126
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
Y +LD VIT+VD+ HA + L + +EA EQV +ADRI+L+K DL + L
Sbjct: 127 YYQLDAVITVVDAVHAHRQLADH------HEAQEQVGFADRILLSKTDLAEPEIIAELES 180
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ +N AP+K +G ++ +L +GG++LE I + ++ HE
Sbjct: 181 RLHAMNPRAPIKRVHFGETELPDILDIGGFNLEDI---LKIEPDFLQDVSHE-------- 229
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HD +SS+ S+ LD +L+ +I G+DL R KGIL+++GS + +F
Sbjct: 230 ------HDDDISSMVYRSKQPLDSARFMHFLDIIIGAFGKDLLRYKGILNLAGSPNKILF 283
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
QGVH + G W E+R +LVFIGRNL + + K C
Sbjct: 284 QGVHMLMGDSQGLPWAEKEERETQLVFIGRNLPKQQILKALMAC 327
>gi|260567765|ref|ZP_05838234.1| cobalamin synthesis protein/P47K [Brucella suis bv. 4 str. 40]
gi|260154430|gb|EEW89511.1| cobalamin synthesis protein/P47K [Brucella suis bv. 4 str. 40]
Length = 372
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 114/310 (36%), Positives = 174/310 (56%), Gaps = 35/310 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V
Sbjct: 71 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRAKTG 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL ++ ++
Sbjct: 130 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPEELAAVEATVR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHHES 171
IN A + + S+ ++ VL G +DL+R+ D HV C HH
Sbjct: 184 AINPHAIIHHTERASIPLNRVLDRGAFDLKRVLDNDPHFLDHDDPDHVCGPDCDHDHHHH 243
Query: 172 AH--------------GHHEGHHHNH---MHDSAVSSVTIVSEGTLDLDEVDDWLERLIE 214
H G H H+H +HD V SV++ + G +D + W++ + +
Sbjct: 244 GHDHHHHDHHDHDHVCGPDCDHDHDHASPIHDVTVKSVSLRT-GEIDPAKFFPWIQNITQ 302
Query: 215 EKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETA 274
+G ++ R+KGI++ +YV QGVH ++G +AW P+EK ++LVFIGR LD A
Sbjct: 303 TQGPNILRLKGIIAFKDDPDRYVVQGVHMIIEGDHQRAWKPEEKHESRLVFIGRELDPAA 362
Query: 275 LRKGFKGCLA 284
L+ GF+ C A
Sbjct: 363 LKAGFENCRA 372
>gi|150376147|ref|YP_001312743.1| cobalamin synthesis protein P47K [Sinorhizobium medicae WSM419]
gi|150030694|gb|ABR62810.1| cobalamin synthesis protein P47K [Sinorhizobium medicae WSM419]
Length = 346
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 113/286 (39%), Positives = 169/286 (59%), Gaps = 16/286 (5%)
Query: 2 VNNGCLCC--TVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+ NGC+CC VR DL+++L +L +K +FDHI++ET+GLA P PV F D+ + ++
Sbjct: 67 MKNGCICCFVDVRNDLIEVLQKLLARKD-KFDHILVETSGLADPTPVATAFFIDDEIGKH 125
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
V LDG++TLVD+KH QH+ + N+AV+Q+ ADRII+NKIDLV++ E+ L
Sbjct: 126 VTLDGIVTLVDAKHIGQHIEDPVLDGRDNQAVDQIVAADRIIINKIDLVSDGEIAPLERD 185
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGH 179
++ +N A + + YG VD+ +LG+ G+ S+ A HH
Sbjct: 186 MRKLNQTAEIVRSSYGKVDLSSILGISGF-----------APSYVAERAKLLDLDHHHHG 234
Query: 180 HHNHMHDSA-VSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HH+H H A VSS + V + D + ++L L+ EKG+D++R KGI++++G + +V
Sbjct: 235 HHHHHHHDATVSSESFVFDRPFDQHRLTEYLSDLLREKGDDIFRTKGIIAITGDPRFFVL 294
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
Q VH +D P WG D +KLVFIGRNLD L +G K CL
Sbjct: 295 QAVHKLMDFRPDHVWGKDMP-YSKLVFIGRNLDRAVLEEGLKRCLT 339
>gi|182680558|ref|YP_001834704.1| cobalamin synthesis protein P47K [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182636441|gb|ACB97215.1| cobalamin synthesis protein P47K [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 363
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 166/306 (54%), Gaps = 31/306 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ G+FD I++ETTGLA PAPV +TF D V +
Sbjct: 66 MNNGCICCTVRGDLIRIIEGLMKRR-GKFDAIIVETTGLADPAPVAQTFFVDADVENAAR 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K Q L + EA Q+A+AD I+LNK DLV+ EL + RI+
Sbjct: 125 LDAVVTVADAKWLSQRLKDAP------EAKNQIAFADVILLNKTDLVSAEELAEVEGRIR 178
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + +V +D V+G +DLERI E+ D + H H H
Sbjct: 179 AINPYAKLHKTVQCAVSLDAVIGRNAFDLERI-LEIEPDFLNAEDDHDHGHDHHDHHDHD 237
Query: 182 -----------------------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGE 218
H HD + SV + G +D ++ WL ++++G
Sbjct: 238 HKHDHHHGHDHGHAHDHEHAGGLKHYHDEEMQSVALTISGDVDPEKFLPWLNDYVQKEGI 297
Query: 219 DLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKG 278
+ R KGIL+ +++VFQGVH LDG + W P E+R++++VFIGR+L +++G
Sbjct: 298 SILRSKGILAFKDEPKRFVFQGVHMILDGNLQREWKPGEQRVSRIVFIGRHLKGDEIKQG 357
Query: 279 FKGCLA 284
F C A
Sbjct: 358 FLACAA 363
>gi|420252587|ref|ZP_14755691.1| putative GTPase, G3E family [Burkholderia sp. BT03]
gi|398054219|gb|EJL46350.1| putative GTPase, G3E family [Burkholderia sp. BT03]
Length = 340
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 165/293 (56%), Gaps = 28/293 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CC VRGDL++++ L ++K G FD I+IE +GLA PAPV++TF D+L+ Q+ +
Sbjct: 60 LNNGCVCCKVRGDLIRVVSGLIRRKSG-FDGILIEMSGLADPAPVVQTFFVDDLIRQHTR 118
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI + D+ H HL + + EA EQ+A AD ++LNK DLV EL S+ E I
Sbjct: 119 LDSVICVADACHLHMHLADSR------EAAEQLAQADVVLLNKADLVGTAELASVKEAIH 172
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHH---HESAHGHHEG 178
IN A + +V + +L G +DL+R+ H A E A G
Sbjct: 173 RINPTAEMLQGVRCAVALSTLLDRGAFDLKRL---------HLAAPQPGGSEFARGERSW 223
Query: 179 HHHN---------HMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSV 229
+ H + +V++ + L+ WL++L+ E+G DL R KGI+ +
Sbjct: 224 RYVPVNPRAAVDLGRHSHGIDNVSLRVDTPLERTRFLSWLQQLVVEQGRDLLRTKGIVDL 283
Query: 230 SGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
+GSE+++VF GVH T+D + W DE R ++LVFIGRNLD LR+ + C
Sbjct: 284 AGSERRFVFHGVHMTMDTDFDRPWRADEHRDSRLVFIGRNLDRRDLRESIRYC 336
>gi|429463024|ref|YP_007184487.1| CobW/HypB/UreG, nucleotide-binding domain-containing protein 5
[Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
gi|429338538|gb|AFZ82961.1| CobW/HypB/UreG, nucleotide-binding domain-containing protein 5
[Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
Length = 340
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 106/284 (37%), Positives = 165/284 (58%), Gaps = 19/284 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKK---KQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGD+V+ L L KK Q FD ++IETTGLA P P+ +TF D+ +++
Sbjct: 70 LSNGCVCCTIRGDMVETLSNLHKKLQTNQINFDRVIIETTGLADPGPLCQTFFIDDYIAK 129
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+ LD +ITLVD+KHA + L+E E+ +Q+ +AD I+++K DLV+E EL L +
Sbjct: 130 HYMLDAIITLVDAKHAPKTLDEQI------ESQKQIGFADVILISKCDLVSEEELLKLQD 183
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ HIN A +K S+D+ +L + G++L+ I +++D HHE
Sbjct: 184 RLIHINPRASIKKLLLDSIDIPSILNISGFNLDDI---LNIDPQFLNQEHHECTEKC--S 238
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HHH+ + S T S+ D ++++ +L ++ +E G D+ R KGIL + + + +F
Sbjct: 239 HHHDD-----IVSFTFYSDKPFDSEKLEKFLSQISQEFGPDMLRYKGILYIKELDNRILF 293
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
QGVH + PGK W EK K+VFIGR L G + C
Sbjct: 294 QGVHMLMGAEPGKPWKGSEKPNTKMVFIGRKLPRELFIHGLELC 337
>gi|451811803|ref|YP_007448258.1| YijA-like cobalamin synthesis GTPase [Candidatus
Kinetoplastibacterium crithidii TCC036E]
gi|451776961|gb|AGF47960.1| YijA-like cobalamin synthesis GTPase [Candidatus
Kinetoplastibacterium crithidii TCC036E]
Length = 345
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 106/284 (37%), Positives = 165/284 (58%), Gaps = 19/284 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKK---KQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGD+V+ L L KK Q FD ++IETTGLA P P+ +TF D+ +++
Sbjct: 75 LSNGCVCCTIRGDMVETLSNLHKKLQTNQINFDRVIIETTGLADPGPLCQTFFIDDYIAK 134
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+ LD +ITLVD+KHA + L+E E+ +Q+ +AD I+++K DLV+E EL L +
Sbjct: 135 HYMLDAIITLVDAKHAPKTLDEQI------ESQKQIGFADVILISKCDLVSEEELLKLQD 188
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ HIN A +K S+D+ +L + G++L+ I +++D HHE
Sbjct: 189 RLIHINPRASIKKLLLDSIDIPSILNISGFNLDDI---LNIDPQFLNQEHHECTEKC--S 243
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HHH+ + S T S+ D ++++ +L ++ +E G D+ R KGIL + + + +F
Sbjct: 244 HHHDD-----IVSFTFYSDKPFDSEKLEKFLSQISQEFGPDMLRYKGILYIKELDNRILF 298
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
QGVH + PGK W EK K+VFIGR L G + C
Sbjct: 299 QGVHMLMGAEPGKPWKGSEKPNTKMVFIGRKLPRELFIHGLELC 342
>gi|395786878|ref|ZP_10466605.1| hypothetical protein ME5_01923 [Bartonella tamiae Th239]
gi|423718203|ref|ZP_17692393.1| hypothetical protein MEG_01933 [Bartonella tamiae Th307]
gi|395423176|gb|EJF89372.1| hypothetical protein ME5_01923 [Bartonella tamiae Th239]
gi|395426636|gb|EJF92763.1| hypothetical protein MEG_01933 [Bartonella tamiae Th307]
Length = 350
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 174/292 (59%), Gaps = 18/292 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 67 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIIVETTGLADPVPVAQTFFMDDDVRAKTQ 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI LVD+KH L + + EA +Q+A+AD ++LNK DLV+E E + I+
Sbjct: 126 LDAVIALVDAKHLPLRLKDSR------EAEDQIAFADVVLLNKTDLVSEKERLDVEATIR 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHHES 171
IN A + + + ++ +L G +DL+R D + H+ CA HHH+
Sbjct: 180 AINPSAMIYKTQRADIALEKILDQGAFDLQRALENDPHFLDHDDDNHICGPDCAHHHHDH 239
Query: 172 AHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSG 231
HH H + HD V+SV++ + G +D + W++ L +++G ++ R+KGI++ G
Sbjct: 240 NDHHHNHDHGHSQHDITVTSVSLRT-GEIDPQKFFPWIQNLTQQQGPNILRLKGIIAFKG 298
Query: 232 SEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+++YV QGVH L+G K W EKR ++LVFIGR L+ L+ F+ C+
Sbjct: 299 DDERYVVQGVHMILEGDHQKPWKEGEKRESRLVFIGRELNSERLKTEFENCV 350
>gi|187922298|ref|YP_001893940.1| cobalamin synthesis protein P47K [Burkholderia phytofirmans PsJN]
gi|187713492|gb|ACD14716.1| cobalamin synthesis protein P47K [Burkholderia phytofirmans PsJN]
Length = 328
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 161/285 (56%), Gaps = 26/285 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQ---FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCTVRGDLV++L LA ++ FD +++ETTGLA PAPV +TF DE V +
Sbjct: 67 MNNGCICCTVRGDLVRILSTLAARRDAGELGFDRVIVETTGLADPAPVAQTFFADEAVQE 126
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD ++T+VD++H L+E +EA EQV +ADRI+++K DL E + +L +
Sbjct: 127 RYLLDAIVTVVDARHGADQLDEH------HEAQEQVGFADRILVSKADLAGEAQTQALMQ 180
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ +N AP++ + +G D+ +L +DL+ I E+ D +H
Sbjct: 181 RLRQMNPRAPIRESHFGKTDLTQLLDTRSFDLDAI-VEIEPDFLQDVSH----------- 228
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HD V+S + LD ++++ + ++ G + R KG+L+V+G++++ VF
Sbjct: 229 -----THDDDVTSFVYRNTAPLDQEKLEAFFSTIVTIYGTSMLRYKGVLNVAGADRRLVF 283
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH G W DE+R K+VFIG+ L + G GC+
Sbjct: 284 QGVHMIFGADLGTPWRADERRETKIVFIGKQLPVEVFKAGLDGCV 328
>gi|451823391|ref|YP_007459665.1| G3E family GTPase [Candidatus Kinetoplastibacterium desouzaii
TCC079E]
gi|451776191|gb|AGF47232.1| G3E family GTPase [Candidatus Kinetoplastibacterium desouzaii
TCC079E]
Length = 339
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/285 (37%), Positives = 169/285 (59%), Gaps = 18/285 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKK---KQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL+K L L +K KQ F+ I+IETTGLA P P+ +TF ++ ++
Sbjct: 68 LSNGCVCCTIRGDLIKTLSDLYEKLSKKQLDFERIIIETTGLADPGPLCQTFFINDYIAN 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+ KLD +ITLVD+KHA + LN EA +QV +AD I+++K DLV L +L +
Sbjct: 128 HYKLDSLITLVDAKHAPETLNNQI------EAQKQVGFADIILISKSDLVPPENLNNLKQ 181
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+K+ +D++++L + G++L DS + +D S + H H
Sbjct: 182 RLIKINPKAPIKILNIDVLDINYLLNISGFNL---DSVLDIDPSFLQSEDHTCTEECH-- 236
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H H +SS S D ++++++L +++++ G D+ R KGIL + G E + +F
Sbjct: 237 ----HHHHDGISSFVFQSYKPFDPEKLENFLSQIVQKYGTDMLRYKGILYMKGIENKILF 292
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH + P + W EK NK+VFIG+NL + +G + CL
Sbjct: 293 QGVHMIMGAEPAEVWAKTEKPNNKIVFIGQNLPKDMFIQGLELCL 337
>gi|90418744|ref|ZP_01226655.1| conserved hypothetical protein with CobW/HypB/UreG domains
[Aurantimonas manganoxydans SI85-9A1]
gi|90336824|gb|EAS50529.1| conserved hypothetical protein with CobW/HypB/UreG domains
[Aurantimonas manganoxydans SI85-9A1]
Length = 378
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 172/313 (54%), Gaps = 38/313 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L ++K G+FD I++ETTGLA P PV +TF DE V +
Sbjct: 68 MNNGCVCCTVRGDLVRVVEGLTRRK-GRFDAIIVETTGLADPVPVAQTFFMDEDVRSKTQ 126
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI LVD+KH L + + EA +Q+A+AD ++LNK DLVT EL ++ ++
Sbjct: 127 LDAVIALVDAKHLPLRLKDSR------EAEDQIAFADVVLLNKTDLVTPDELAAVEATVR 180
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI---DSEV-----HVDNSHCATH------ 167
IN A + + +D+ VLG G +DL+R+ D E V + C
Sbjct: 181 AINPYAVIHRTERAGIDLKRVLGQGAFDLKRVLDADPEFLTEAEQVHDETCGPDCGHDHD 240
Query: 168 ----------------HHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLER 211
H HGHH +HD V+SV++ LD + W++
Sbjct: 241 HGHHHHGDGHDHSGHDHAGHDHGHHHHGKVAELHDVTVTSVSLRG-AALDPKKFFPWIQA 299
Query: 212 LIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLD 271
L +E+G ++ R+KGI++ ++YV QGVH ++G + W DEKR ++LVFIGRNLD
Sbjct: 300 LTQEQGPNILRLKGIIAFEDDPERYVVQGVHMIVEGDHQRPWRDDEKRESRLVFIGRNLD 359
Query: 272 ETALRKGFKGCLA 284
L F+ C A
Sbjct: 360 ADELSAEFEACSA 372
>gi|149925583|ref|ZP_01913847.1| hypothetical protein LMED105_05147 [Limnobacter sp. MED105]
gi|149825700|gb|EDM84908.1| hypothetical protein LMED105_05147 [Limnobacter sp. MED105]
Length = 322
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 169/286 (59%), Gaps = 26/286 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGCLCCTVRGDLV++L ++A K+ +FD +VIETTG+A P PV +TF D+LV++
Sbjct: 59 MNNGCLCCTVRGDLVRILGEMAAKRLAGELKFDRVVIETTGMADPGPVAQTFFVDDLVAE 118
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD V+T+VD+KH MQ L+E + E +QV +ADRI+L+K DL TE E+ +L
Sbjct: 119 SFILDAVVTVVDAKHGMQQLDEHR------EIQQQVGFADRILLSKTDLCTEDEVTALKR 172
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ +NA A + ++++G +D +L V G++L I ++ D
Sbjct: 173 RLVKMNARAEMMISEFGVAPIDKLLDVRGFNLNSI-LDIAPDFL---------------- 215
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H+H+ + S S D + ++++ + + G D+ R KGIL++ S+++ +F
Sbjct: 216 DEDKHIHNDEIQSFVFKSTKPFDGQKFEEFMGSVTQVYGPDMLRYKGILNIKASDRRALF 275
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QGVH + G+ W EK+ +K+VFIGR L + + +G + CLA
Sbjct: 276 QGVHMLMGLDWGRKWDSAEKKESKIVFIGRKLPKEFITQGLELCLA 321
>gi|340789220|ref|YP_004754685.1| putative GTPases (G3E family) [Collimonas fungivorans Ter331]
gi|340554487|gb|AEK63862.1| Putative GTPases (G3E family) [Collimonas fungivorans Ter331]
Length = 391
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 172/302 (56%), Gaps = 32/302 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCTVRGDL+ L LA+++ FD ++IETTG+A P PV +TF D+ V+
Sbjct: 101 MNNGCICCTVRGDLIVALTTLARRRAAGELNFDRVIIETTGMANPGPVAQTFFVDDEVAM 160
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+ LD ++T+VD+KHAM L++ + EA QV +AD+++L+K DLVT E+ +LT
Sbjct: 161 HFMLDAIVTVVDAKHAMMQLDQQE------EAQRQVGFADKLLLSKTDLVTTAEVTALTS 214
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGH-HE 177
R+K IN AP+ ++ +L + G++L ++++ +D AT E HGH H
Sbjct: 215 RLKRINPRAPIITLDPQHTPIEEILDIRGFNL---NAKLEIDPDFLAT---EEEHGHEHS 268
Query: 178 GHHHNH----------------MHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLY 221
G +H HD +++ SE D +D++L L++ G +
Sbjct: 269 GDDCDHPSHQHQGHGHHDHHHAHHDDEIAAFVFKSERPFDTARLDEFLGGLVQVYGPRML 328
Query: 222 RMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
R KG+L + G++++ VFQGVH + G W +E R +K+VFIG+NL + +G +
Sbjct: 329 RYKGVLLMDGADRKVVFQGVHQIMGSDVGGKWDANETRGSKMVFIGKNLPKDIFIRGLEQ 388
Query: 282 CL 283
CL
Sbjct: 389 CL 390
>gi|209517686|ref|ZP_03266523.1| cobalamin synthesis protein P47K [Burkholderia sp. H160]
gi|209501861|gb|EEA01880.1| cobalamin synthesis protein P47K [Burkholderia sp. H160]
Length = 340
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 165/286 (57%), Gaps = 14/286 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CC VRGDL++++ L K+K G FD I+IET+GLA PAPV++TF D+ + Q +
Sbjct: 60 LNNGCVCCKVRGDLIRVVSALVKRKDG-FDGILIETSGLADPAPVVQTFFIDDEIRQRTR 118
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI + D H L + +EA EQ+A A+ +++NKIDL+ L ++ + ++
Sbjct: 119 LDSVICVADGLHLQARLADS------SEAAEQLAQAEIVLINKIDLIDAAGLVAVQDDVR 172
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCA-----THHHESAHGHH 176
IN A + + + +L G +DL+R+ S A T+ +
Sbjct: 173 RINPTAEQLTSVRCEIPLAVLLDRGAFDLKRLQLAAAPAASSDAASGERTYRYVPLRAGA 232
Query: 177 EGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQY 236
NH H + S+++ E L+ WL+RL+ E+G+DL R KGI+ ++GSE+++
Sbjct: 233 SVKQGNHSH--GIDSISLRVERPLERTRFLSWLQRLVVEQGQDLLRAKGIVDLAGSERRF 290
Query: 237 VFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
VFQGVH T+D + W E+R ++LVFIGRNLD LR+ + C
Sbjct: 291 VFQGVHMTMDTDFDRPWRDGEQRDSRLVFIGRNLDRRELRESIRHC 336
>gi|407974710|ref|ZP_11155618.1| cobalamin synthesis protein, P47K [Nitratireductor indicus C115]
gi|407429793|gb|EKF42469.1| cobalamin synthesis protein, P47K [Nitratireductor indicus C115]
Length = 363
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/301 (39%), Positives = 170/301 (56%), Gaps = 26/301 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L ++ G+FD IV+ETTGLA PAPV +TF D+ V K
Sbjct: 71 MNNGCICCTVRGDLVRVVEGLMRRP-GRFDAIVVETTGLADPAPVAQTFFMDDDVRAKTK 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + NEA +Q+A+AD +I+NK DLVT EL ++ I+
Sbjct: 130 LDAVVALVDAKHLPLRLKDS------NEAEDQIAFADVVIVNKTDLVTPDELAAVESTIR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHHES 171
IN A + A+ V + VL G +DL+R+ D HV C HH
Sbjct: 184 AINPTARILRAERAGVSLSDVLDRGAFDLKRVLDNDPHFLDHDDPDHVCGPDCDHDHHHH 243
Query: 172 AHGHHEGHHH--------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRM 223
H H HHH + +HD V S+++ + G +D + W+E+ + G + R+
Sbjct: 244 HHDHDHDHHHHHHHHGEVSPIHDVQVQSISLRA-GEMDPKKFFPWIEKTTQMDGPSILRL 302
Query: 224 KGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
KGI++ ++V QGVH ++G + W DEKR +LVFIGR+LD L + F+ C
Sbjct: 303 KGIIAFRDDPDRFVVQGVHMIIEGDHQRPWREDEKRETRLVFIGRDLDAERLTRTFEACQ 362
Query: 284 A 284
A
Sbjct: 363 A 363
>gi|319406031|emb|CBI79661.1| putative cobalamin synthesis protein [Bartonella sp. AR 15-3]
Length = 349
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 175/286 (61%), Gaps = 12/286 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L ++ +FD I+IETTG+A P PV +TF D+ + +
Sbjct: 72 MNNGCICCTVRGDLIRVLESLMQRS-NRFDAIIIETTGIADPTPVAQTFFMDDTIREKTA 130
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VITL+D+KH L E EA +Q+A+AD I+LNKIDLV+ E + I
Sbjct: 131 LDSVITLIDAKHLPLQLKESP------EAEDQIAFADIILLNKIDLVSAEERAHIESLIY 184
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-DSEVHVDNSHCATH---HHESAHGHHE 177
IN+ A + + ++ ++ +L G +DL+R+ +++ H N H + HH
Sbjct: 185 TINSNAIIYATERANIPLNKILDRGSFDLQRVLENDPHFLNHKNPDHVCSPECNHEHHHR 244
Query: 178 GHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYV 237
+H + MH+ ++S+++ + G L ++ WL+++ +E+G ++ R+KGI++ G + +YV
Sbjct: 245 HNHKSLMHNVTITSISLKT-GALQQEKFFSWLQKITQEQGPNILRLKGIIAFHGDDNRYV 303
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QG+H L+G + W +EKR ++LV IGR+LD L+ F+ C+
Sbjct: 304 IQGIHMLLEGQHQRPWHQNEKRESRLVLIGRSLDAEKLKIDFENCI 349
>gi|395790318|ref|ZP_10469808.1| hypothetical protein ME9_01525 [Bartonella taylorii 8TBB]
gi|395426189|gb|EJF92317.1| hypothetical protein ME9_01525 [Bartonella taylorii 8TBB]
Length = 342
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/283 (37%), Positives = 175/283 (61%), Gaps = 10/283 (3%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L ++ +FD I++ETTGLA P PV +TF D+ V +
Sbjct: 67 MNNGCVCCTVRGDLIRILESLMQRSH-RFDAIILETTGLADPIPVAQTFFMDDTVHEKTA 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI +VD+KH L + + EA +Q+A++D I+LNKIDLV+ E + I
Sbjct: 126 LDSVIAVVDAKHFPLQLKKSR------EAEDQIAFSDIILLNKIDLVSAEECAHVQSLIL 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVH-VDNSHCATHHHESAHGHHEGH 179
IN A + + ++ ++ +L G +DL+R +D++ H +D+ H + HH H
Sbjct: 180 AINPRAILYATERANIPLNKLLDRGSFDLQRTLDNDPHFLDHQHSNHVCGPDCNHHHVHH 239
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
H +HD +SS+++ + L ++ W++++ +++G D+ R+KGI++ G + +YV Q
Sbjct: 240 HTATIHDITISSISLKTSA-LHPEKFFSWIQQVTQQQGPDILRLKGIIAFQGDDDRYVIQ 298
Query: 240 GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
G+H L+G + W +EKR ++LVFIGRNLD L+ GF+ C
Sbjct: 299 GIHMILEGQHQRPWRENEKRESRLVFIGRNLDPDKLKTGFENC 341
>gi|170742682|ref|YP_001771337.1| cobalamin synthesis protein P47K [Methylobacterium sp. 4-46]
gi|168196956|gb|ACA18903.1| cobalamin synthesis protein P47K [Methylobacterium sp. 4-46]
Length = 320
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/283 (39%), Positives = 165/283 (58%), Gaps = 23/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L K++ G+FD I++ETTGLA PAPV +TF D+ V + +
Sbjct: 61 MNNGCICCTVRGDLIRIMDGLMKRR-GKFDAIIVETTGLADPAPVAQTFFVDQDVGEAAR 119
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+ D+K + L + EA Q+A+AD I+LNK DLV E EL ++ RI+
Sbjct: 120 LDAVVTVADAKWLSERLKDAP------EARNQIAFADVILLNKADLVGEDELAAVERRIR 173
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + V +D VL +DL+RI + V+ EGHHH
Sbjct: 174 AINPSARIHRTVKCDVPLDAVLDRRAFDLDRI---IAVEPEFL-----------EEGHHH 219
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+H D + SV+ G +D ++ W+ L + +G D+ R KGI+S +++VFQGV
Sbjct: 220 HHAED--IQSVSAWLPGPVDPNKFMPWISDLTQVQGPDILRCKGIVSFPDEPRRFVFQGV 277
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H LDG W + R +++VFIGRNLD +R+GF+ A
Sbjct: 278 HMILDGDLQDEWPAGDPRESRVVFIGRNLDPDQIRRGFEATRA 320
>gi|340778110|ref|ZP_08698053.1| cobalamin synthesis protein P47K [Acetobacter aceti NBRC 14818]
Length = 333
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/283 (40%), Positives = 162/283 (57%), Gaps = 24/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K++ +FD I++ETTGLA PAPV +TF DE V +
Sbjct: 75 MNNGCICCTVRGDLIRILGSLMKRRT-KFDGIIVETTGLADPAPVAQTFFVDEEVRDKTR 133
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+ + +Q L E EAV Q+A+AD IILNK DLV E +L + I+
Sbjct: 134 LDAVVTVVDAYNVLQTLEESP------EAVHQIAFADVIILNKTDLVDEAKLAEIEANIR 187
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
INA + A G+V + VL GG+DL+R E E H
Sbjct: 188 QINAYVKIHRAVRGNVPLTDVLDQGGFDLQR---------------ALEYEPDFLENTEH 232
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+H D V+S++ +D W+ L++E+G D+ R KGIL+ +G +Y FQ V
Sbjct: 233 SHEED--VTSMSFSVSEPIDEARFHAWISALLQEQGADILRSKGILNFAGHNDRYAFQAV 290
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H DG W EK+ ++LVFIGRNL+ LR+GF+ C A
Sbjct: 291 HMMADGDFIGPWKDGEKKESRLVFIGRNLNRPRLRRGFESCRA 333
>gi|297845544|ref|XP_002890653.1| hypothetical protein ARALYDRAFT_472757 [Arabidopsis lyrata subsp.
lyrata]
gi|297336495|gb|EFH66912.1| hypothetical protein ARALYDRAFT_472757 [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/284 (36%), Positives = 160/284 (56%), Gaps = 22/284 (7%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CCTV+ LV+ L QL ++K + DHI++ETTGLA PAP+ D+ + VKLD
Sbjct: 106 NGCVCCTVKHSLVQALEQLVQRK-DRLDHILLETTGLANPAPLASILWLDDQLESEVKLD 164
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIKHI 123
++T+VD+K+ LNE + +EA Q+A+AD II+NK+DL+++ E L + I I
Sbjct: 165 CIVTVVDAKNLRFQLNERRDSSSFSEAFNQIAFADTIIMNKVDLISQEESDELEKEIHSI 224
Query: 124 NAMAPVKLAKYGSVDMDFVLGVGGYD---LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
N++A V + VD+ +L YD + R++S + + S T
Sbjct: 225 NSLANVIRSVRCQVDLSNILNCQAYDSNHVSRLESLLETNKSLTTT-------------- 270
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGE--DLYRMKGILSVSGSEQQYVF 238
+HDS + ++ I ++LD+V WLE ++ +K D+YR K +LS+ S+Q ++
Sbjct: 271 --DLHDSGIRTLCISEPQPINLDKVRLWLEEILWDKKSEMDVYRCKAVLSIQNSDQMHIL 328
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
Q V + P + W +E R NK+VFIG LDE LR G + C
Sbjct: 329 QAVREIYEIVPARKWSEEENRTNKIVFIGHKLDEEVLRSGLRDC 372
>gi|328542429|ref|YP_004302538.1| cobalamin synthesis protein CobW [Polymorphum gilvum SL003B-26A1]
gi|326412176|gb|ADZ69239.1| cobalamin synthesis protein, CobW [Polymorphum gilvum SL003B-26A1]
Length = 375
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 176/321 (54%), Gaps = 53/321 (16%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++ + L K++ G FD I++ETTG+A PAPV +TF DE V K
Sbjct: 70 MNNGCICCTVRGDLIRTVQNLMKRR-GAFDAIIVETTGVADPAPVAQTFFMDEDVRAAAK 128
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ +VD++H +Q L + + EA +Q+A+AD I++NK DLV+ EL + RI+
Sbjct: 129 LDAVVAVVDARHVLQRLEDTE------EAEDQIAFADVILINKTDLVSAEELAEVEARIR 182
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDS--EVHVDNSH---------------- 163
IN A + ++D+ VL G +DL+RI S +DN H
Sbjct: 183 AINPYALRHRTERCAIDLASVLDRGAFDLDRILSLDPQFLDNGHHAHECGPDCDHEHHHH 242
Query: 164 --------------------CATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLD 203
C HH+ H HHE H +V S+++ + G LD D
Sbjct: 243 GREHEHHHHDHDPDHVCGPDCGHDHHDQGHHHHENPH-------SVRSISLKA-GDLDPD 294
Query: 204 EVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKL 263
W+ ++ + KG ++ R+KGIL+ G Q+YV QGVH ++G + W +E R ++L
Sbjct: 295 MFFPWINQVTQFKGPNILRLKGILAFKGDPQRYVIQGVHMIVEGDHQRDWKAEEARESRL 354
Query: 264 VFIGRNLDETALRKGFKGCLA 284
VFIGR+LD L++ F+ C A
Sbjct: 355 VFIGRDLDFDQLKQSFEACAA 375
>gi|78061484|ref|YP_371392.1| cobalamin synthesis protein/P47K [Burkholderia sp. 383]
gi|77969369|gb|ABB10748.1| Cobalamin synthesis protein/P47K [Burkholderia sp. 383]
Length = 369
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 173/292 (59%), Gaps = 16/292 (5%)
Query: 2 VNNGCLCC--TVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQY 59
+ NGC+CC VR DLV+++ L + + DHI++ET+GLA P PV +TF D+ +++
Sbjct: 70 MTNGCVCCVGAVREDLVRIVRMLVARPD-RLDHIIVETSGLADPYPVAQTFFLDDPIAKE 128
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
V LD V+T+VD+KH HL+++ N+AV+Q+ ADRI++NK+DLV ++ +LT R
Sbjct: 129 VALDAVVTMVDAKHIRAHLDDLVLDGRDNQAVDQIVCADRIVINKVDLVDTPDVDALTAR 188
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSE---VHVDNSHCATHHHESAHGHH 176
++ +N A + + Y VD+D +LG+G + +I E + D H HE H H
Sbjct: 189 LRELNTTAEIVTSSYAQVDLDRILGIGANEFAQILVESDGLQADAPHADEQAHEHDHEHD 248
Query: 177 EGHHHNHMHDS---------AVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGIL 227
+ + H HD +VSSV I + +DLD ++ WL L +L+RMKGIL
Sbjct: 249 DHAYEAHAHDDDHDHHEHDESVSSVGIEVDADVDLDALEAWLGELRHSDTANLFRMKGIL 308
Query: 228 SVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
+V G Q+YV QGVH ++ +AWG E R +++VFIGR+LD AL F
Sbjct: 309 AVQGRAQRYVLQGVHGVIELRAAQAWGC-EPRSSRIVFIGRDLDRAALTDRF 359
>gi|152980970|ref|YP_001354895.1| G3E family GTPase [Janthinobacterium sp. Marseille]
gi|151281047|gb|ABR89457.1| GTPases (G3E family) [Janthinobacterium sp. Marseille]
Length = 351
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 171/299 (57%), Gaps = 26/299 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCTVRGDL+ L LA+K+ QFDH+VIETTGLA P PV +TF DE V+
Sbjct: 61 MNNGCICCTVRGDLIIALTSLAQKRNAGELQFDHVVIETTGLANPGPVAQTFFVDEEVAS 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+D +IT+VD+KHAM L+ + EA QV +AD+++ +K DLV+ EL +LTE
Sbjct: 121 EYLVDAIITVVDAKHAMHQLDSYE------EAQRQVGFADKLLFSKTDLVSAEELKTLTE 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
RIK IN APV +G V + VL + G++L + ++ +D A H HGH
Sbjct: 175 RIKRINPRAPVSTTDFGRVAIADVLDLRGFNL---NDKLEIDPDFIAAEEHAHEHGHEHE 231
Query: 179 HHHN--------------HMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMK 224
H H+ H +++ SE + +++D++L L++ G + R K
Sbjct: 232 HDHSCDAHCEHDHHDHHHGHHSDNIAAFVFKSERPFNTEKLDEFLGSLVQVFGPRMLRYK 291
Query: 225 GILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
G+L + G++++ VFQGVH + G W +E R +K+VFIG+NL + G + CL
Sbjct: 292 GVLWMDGADRKVVFQGVHQIMGTDIGAKWAENEVRSSKMVFIGQNLPKETFIFGLEQCL 350
>gi|145336129|ref|NP_173974.3| Cobalamin biosynthesis CobW-like protein [Arabidopsis thaliana]
gi|63147374|gb|AAY34160.1| At1g26520 [Arabidopsis thaliana]
gi|332192579|gb|AEE30700.1| Cobalamin biosynthesis CobW-like protein [Arabidopsis thaliana]
Length = 374
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/284 (36%), Positives = 159/284 (55%), Gaps = 22/284 (7%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CCTV+ LV+ L QL ++K + DHI++ETTGLA PAP+ D+ + VKLD
Sbjct: 106 NGCVCCTVKHSLVQALEQLVQRKD-RLDHILLETTGLANPAPLASILWLDDQLESEVKLD 164
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIKHI 123
++T+VD+K+ LNE + EA Q+A+AD II+NK+DL+++ E L + I I
Sbjct: 165 CIVTVVDAKNLRFQLNERRDSSSFPEAFNQIAFADTIIMNKVDLISQEESDELEKEIHSI 224
Query: 124 NAMAPVKLAKYGSVDMDFVLGVGGYD---LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
N++A V + VD+ +L YD + R++S + + S T
Sbjct: 225 NSLANVIRSVRCQVDLSNILNCQAYDSTHVSRLESLLEANKSLTTT-------------- 270
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGE--DLYRMKGILSVSGSEQQYVF 238
+HDS V ++ I ++LD+V WLE ++ +K D+YR K +LS+ S+Q ++
Sbjct: 271 --DLHDSGVRTLCISEPQPINLDKVRLWLEEILWDKKSEMDVYRCKAVLSIQNSDQMHIL 328
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
Q V + P + W +E R NK+VFIG LDE LR G + C
Sbjct: 329 QAVRDIYEIVPARKWSEEENRTNKIVFIGHKLDEEVLRSGLRDC 372
>gi|62321492|dbj|BAD94941.1| hypothetical protein [Arabidopsis thaliana]
Length = 364
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/284 (36%), Positives = 159/284 (55%), Gaps = 22/284 (7%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CCTV+ LV+ L QL ++K + DHI++ETTGLA PAP+ D+ + VKLD
Sbjct: 96 NGCVCCTVKHSLVQALEQLVQRKD-RLDHILLETTGLANPAPLASILWLDDQLESEVKLD 154
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIKHI 123
++T+VD+K+ LNE + EA Q+A+AD II+NK+DL+++ E L + I I
Sbjct: 155 CIVTVVDAKNLRFQLNERRDSSSFPEAFNQIAFADTIIMNKVDLISQEESDELEKEIHSI 214
Query: 124 NAMAPVKLAKYGSVDMDFVLGVGGYD---LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
N++A V + VD+ +L YD + R++S + + S T
Sbjct: 215 NSLANVIRSVRCQVDLSNILNCQAYDSTHVSRLESLLEANKSLTTT-------------- 260
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGE--DLYRMKGILSVSGSEQQYVF 238
+HDS V ++ I ++LD+V WLE ++ +K D+YR K +LS+ S+Q ++
Sbjct: 261 --DLHDSGVRTLCISEPQPINLDKVRLWLEEILWDKKSEMDVYRCKAVLSIQNSDQMHIL 318
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
Q V + P + W +E R NK+VFIG LDE LR G + C
Sbjct: 319 QAVRDIYEIVPARKWSEEENRTNKIVFIGHKLDEEVLRSGLRDC 362
>gi|330998976|ref|ZP_08322701.1| CobW/P47K family protein [Parasutterella excrementihominis YIT
11859]
gi|329575718|gb|EGG57244.1| CobW/P47K family protein [Parasutterella excrementihominis YIT
11859]
Length = 375
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 177/319 (55%), Gaps = 46/319 (14%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCT+RGDL + L++L +KK+G+ FD ++IETTGLA P PV +TF DE V+Q
Sbjct: 67 MNNGCICCTIRGDLAENLIRLMERKKEGKANFDRVIIETTGLADPGPVAQTFFMDEEVAQ 126
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+ +DGVIT+VD+ + + L+E P A QV +ADRI+L+K+DLV + + L++
Sbjct: 127 FYMVDGVITVVDAVNGPRTLDEQAP------AQAQVGFADRILLSKVDLVPPSVIEDLSD 180
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSH--------------- 163
R+ H+N AP+ G+VD+ VL + G++L DS + +D
Sbjct: 181 RLHHMNPRAPIVECNMGNVDIKEVLDIRGFNL---DSVLELDPDFLKEAHEEGEHHHHHE 237
Query: 164 ------------------CATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEV 205
C H+ H HHH+ HD +++ S+ D +
Sbjct: 238 DGCTCGCHDHDHHDHDDHCECGDHDHDHCECGHHHHHARHDDEIAAFVFESDRPFDPARL 297
Query: 206 DDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVF 265
D+++ L + G D+ R KG+L ++G++++ +FQGVH + G WG D K K+VF
Sbjct: 298 DNYMRTLTQVYGPDMLRYKGVLYMTGTDRKMIFQGVHMLMAADLGNPWG-DTKPSTKMVF 356
Query: 266 IGRNLDETALRKGFKGCLA 284
IGR L + A+ +G + CLA
Sbjct: 357 IGRRLPKKAIMQGLETCLA 375
>gi|303256280|ref|ZP_07342296.1| CobW/P47K family protein [Burkholderiales bacterium 1_1_47]
gi|302861009|gb|EFL84084.1| CobW/P47K family protein [Burkholderiales bacterium 1_1_47]
Length = 370
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 177/319 (55%), Gaps = 46/319 (14%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCT+RGDL + L++L +KK+G+ FD ++IETTGLA P PV +TF DE V+Q
Sbjct: 62 MNNGCICCTIRGDLAENLIRLMERKKEGKANFDRVIIETTGLADPGPVAQTFFMDEEVAQ 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+ +DGVIT+VD+ + + L+E P A QV +ADRI+L+K+DLV + + L++
Sbjct: 122 FYMVDGVITVVDAVNGPRTLDEQAP------AQAQVGFADRILLSKVDLVPPSVIEDLSD 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSH--------------- 163
R+ H+N AP+ G+VD+ VL + G++L DS + +D
Sbjct: 176 RLHHMNPRAPIVECNMGNVDIKEVLDIRGFNL---DSVLELDPDFLKEAHEEGEHHHHHE 232
Query: 164 ------------------CATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEV 205
C H+ H HHH+ HD +++ S+ D +
Sbjct: 233 DGCTCGCHDHDHHDHDDHCECGDHDHDHCECGHHHHHARHDDEIAAFVFESDRPFDPARL 292
Query: 206 DDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVF 265
D+++ L + G D+ R KG+L ++G++++ +FQGVH + G WG D K K+VF
Sbjct: 293 DNYMRTLTQVYGPDMLRYKGVLYMTGTDRKMIFQGVHMLMAADLGNPWG-DTKPSTKMVF 351
Query: 266 IGRNLDETALRKGFKGCLA 284
IGR L + A+ +G + CLA
Sbjct: 352 IGRRLPKKAIMQGLETCLA 370
>gi|333913329|ref|YP_004487061.1| cobalamin synthesis protein P47K [Delftia sp. Cs1-4]
gi|333743529|gb|AEF88706.1| cobalamin synthesis protein P47K [Delftia sp. Cs1-4]
Length = 332
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 162/286 (56%), Gaps = 26/286 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCTVRGDL+++L +L KKQ FD ++IETTGLA P PV + F DE +SQ
Sbjct: 61 MNNGCVCCTVRGDLIRILGELHAKKQAGTLDFDRVIIETTGLASPGPVAQAFFVDEDISQ 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD VIT+VD+ HA + LNE +EA EQV +ADRI++ K DL + + +L +
Sbjct: 121 RYLLDAVITMVDANHAARQLNEH------HEAQEQVGFADRILITKADLASPQDTAALRQ 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
+ +N A + A++G ++ +L + G++L +S + ++ + A HH
Sbjct: 175 HLIQMNPRARISEARHGQANVKDILDIRGFNL---NSVLEIEPNFLADAHHHHD------ 225
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
V+S E LDL ++ +L R+++ G L R KG+L V G+ ++ VF
Sbjct: 226 --------DDVTSFVFREEKPLDLQRIECFLGRIVQIHGAQLMRYKGVLHVDGANRRVVF 277
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QGVH + G W P E R +KLVFIGR+L L +G + C A
Sbjct: 278 QGVHMLMGSVLGAPWKPGEARGSKLVFIGRDLPIELLTRGLRECFA 323
>gi|319780101|ref|YP_004139577.1| cobalamin synthesis protein P47K [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317165989|gb|ADV09527.1| cobalamin synthesis protein P47K [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 349
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 171/293 (58%), Gaps = 18/293 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V +
Sbjct: 64 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRSKTR 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD ++LNK DLVT EL + I+
Sbjct: 123 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVVLNKTDLVTSEELAKVEATIR 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHV---------DNSHCATHHHES 171
IN A + VD+ VL G +DL R ++++ H + HHH
Sbjct: 177 AINPAAKIHRTTRAGVDLTEVLDRGAFDLSRALENDPHFLEVHDDHDHHDHDGHDHHHHD 236
Query: 172 AHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSG 231
GH H + +HD V SV++ G +D + W+E++ + +G ++ R+KGI+++ G
Sbjct: 237 HDGHDHHAHASDIHDVTVQSVSLRG-GEMDPKKFFPWIEKITQMEGPNILRLKGIIALKG 295
Query: 232 SEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+++Y+ QGVH ++G +AW EK ++LVFIGR LD L+K F C A
Sbjct: 296 DDERYLIQGVHMIIEGDHQRAWKDGEKHESRLVFIGRELDAERLKKSFDACQA 348
>gi|433771730|ref|YP_007302197.1| putative GTPase, G3E family [Mesorhizobium australicum WSM2073]
gi|433663745|gb|AGB42821.1| putative GTPase, G3E family [Mesorhizobium australicum WSM2073]
Length = 347
Score = 190 bits (482), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 115/292 (39%), Positives = 171/292 (58%), Gaps = 17/292 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V K
Sbjct: 64 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRSKTK 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + K EA +Q+A+AD ++LNK DLVT EL + I+
Sbjct: 123 LDAVVALVDAKHLPLRLKDSK------EAEDQIAFADVVVLNKTDLVTPEELAKVEATIR 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHV--------DNSHCATHHHESA 172
IN A + V + VL G +DL R ++++ H + H HH
Sbjct: 177 AINPAAKIHRTTRAGVALSEVLDRGAFDLSRALENDPHFLEAHDEHDHHDHDHDHHDHDG 236
Query: 173 HGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGS 232
H HH H + +HD V SV++ G +D + W+E++ + +G ++ R+KGI+++ G
Sbjct: 237 HDHHHHAHPSDIHDVTVQSVSLRG-GEMDPKKFFPWIEKVTQMEGPNILRLKGIIALKGD 295
Query: 233 EQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+++YV QGVH ++G +AW EK ++LVFIGR LD L+K F C A
Sbjct: 296 DERYVIQGVHMIIEGDHQRAWKDGEKHESRLVFIGRELDAERLKKSFDACQA 347
>gi|225686744|ref|YP_002734716.1| cobalamin synthesis protein P47K [Brucella melitensis ATCC 23457]
gi|256262121|ref|ZP_05464653.1| cobalamin synthesis protein [Brucella melitensis bv. 2 str. 63/9]
gi|384213499|ref|YP_005602582.1| cobalamin synthesis protein P47K [Brucella melitensis M5-90]
gi|384410600|ref|YP_005599220.1| cobalamin synthesis protein P47K [Brucella melitensis M28]
gi|384447099|ref|YP_005661317.1| cobalamin synthesis protein P47K [Brucella melitensis NI]
gi|225642849|gb|ACO02762.1| cobalamin synthesis protein P47K [Brucella melitensis ATCC 23457]
gi|263091822|gb|EEZ16144.1| cobalamin synthesis protein [Brucella melitensis bv. 2 str. 63/9]
gi|326411147|gb|ADZ68211.1| cobalamin synthesis protein P47K [Brucella melitensis M28]
gi|326554439|gb|ADZ89078.1| cobalamin synthesis protein P47K [Brucella melitensis M5-90]
gi|349745096|gb|AEQ10638.1| cobalamin synthesis protein P47K [Brucella melitensis NI]
Length = 377
Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 114/315 (36%), Positives = 173/315 (54%), Gaps = 40/315 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V
Sbjct: 71 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRAKTG 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL ++ ++
Sbjct: 130 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPEELAAVEATVR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHHES 171
IN A + + S+ +D VL G +DL+R+ D HV C HH
Sbjct: 184 AINPHAIIHRTERASIPLDRVLDRGAFDLKRVLDNDPHFLDHDDPDHVCGPDCDHDHHHH 243
Query: 172 AH-------------------GHHEGHHHNH---MHDSAVSSVTIVSEGTLDLDEVDDWL 209
H G H H+H +HD V SV++ + G +D + W+
Sbjct: 244 GHHHHGHDHHHHDHHDHDHVCGPDCDHDHDHASPIHDVTVKSVSLRT-GEIDPAKFFPWI 302
Query: 210 ERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRN 269
+ + + +G ++ R+KGI++ +YV QGVH ++G +AW +EK ++LVFIGR
Sbjct: 303 QNITQTQGPNILRLKGIIAFKDDPDRYVVQGVHMIIEGDHQRAWKLEEKHESRLVFIGRE 362
Query: 270 LDETALRKGFKGCLA 284
LD AL+ GF+ C A
Sbjct: 363 LDPAALKAGFENCRA 377
>gi|15966935|ref|NP_387288.1| hypothetical protein SMc03799 [Sinorhizobium meliloti 1021]
gi|334317880|ref|YP_004550499.1| cobalamin synthesis protein P47K [Sinorhizobium meliloti AK83]
gi|384531004|ref|YP_005715092.1| cobalamin synthesis protein P47K [Sinorhizobium meliloti BL225C]
gi|384537719|ref|YP_005721804.1| hypothetical protein SM11_chr3307 [Sinorhizobium meliloti SM11]
gi|407722191|ref|YP_006841853.1| hypothetical protein BN406_02982 [Sinorhizobium meliloti Rm41]
gi|418405336|ref|ZP_12978736.1| cobalamin synthesis protein P47K [Sinorhizobium meliloti
CCNWSX0020]
gi|15076208|emb|CAC47761.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|333813180|gb|AEG05849.1| cobalamin synthesis protein P47K [Sinorhizobium meliloti BL225C]
gi|334096874|gb|AEG54885.1| cobalamin synthesis protein P47K [Sinorhizobium meliloti AK83]
gi|336034611|gb|AEH80543.1| hypothetical protein SM11_chr3307 [Sinorhizobium meliloti SM11]
gi|359500705|gb|EHK73367.1| cobalamin synthesis protein P47K [Sinorhizobium meliloti
CCNWSX0020]
gi|407320423|emb|CCM69027.1| hypothetical protein BN406_02982 [Sinorhizobium meliloti Rm41]
Length = 329
Score = 189 bits (481), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 164/283 (57%), Gaps = 23/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++++ +FD I+IETTGLA PAPV +TF DE V +
Sbjct: 64 MNNGCICCTVRGDLIRIIEALMRRRE-RFDGILIETTGLADPAPVAQTFFVDEDVRSKTR 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD +IT+VD+KH + ++ +EA EQ+A+AD IILNK DLV+ L ++ +RI+
Sbjct: 123 LDSIITVVDAKHLLGEIDRA------HEAQEQLAFADTIILNKTDLVSPEGLQAVEDRIR 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + + ++++ +L +DL+RI EV D H
Sbjct: 177 RINPTAGILKTQRCNLEIASLLDRNAFDLDRI-LEVEPDFLEADHDHEHD---------- 225
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
V+S ++V +D ++ WL+ G D+ RMKGI++ +G +YV QGV
Sbjct: 226 -----DHVASFSLVERRPVDPEKFFRWLQTTARAFGTDMLRMKGIIAFAGDTDRYVVQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H ++G + W E+R+++LVFIGRNL + + GF C A
Sbjct: 281 HMLVEGDHQRPWKEGEERVSRLVFIGRNLPKDVITDGFMACCA 323
>gi|254472952|ref|ZP_05086350.1| cobalamin synthesis protein/P47K family protein [Pseudovibrio sp.
JE062]
gi|211957673|gb|EEA92875.1| cobalamin synthesis protein/P47K family protein [Pseudovibrio sp.
JE062]
Length = 365
Score = 189 bits (481), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 169/312 (54%), Gaps = 41/312 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++ + L K+K G FD I++ETTG+A PAPV +TF D+ V + K
Sbjct: 65 MNNGCICCTVRGDLIRTVENLMKRK-GAFDAIIVETTGVADPAPVAQTFFMDDDVREAAK 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ +VD++H Q L + K EA +Q+A++D I+LNK DLV+ EL + I+
Sbjct: 124 LDAVVAVVDARHVQQRLKDTK------EAEDQIAFSDVILLNKTDLVSAEELVGVEAAIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI---DSEVHVDNSHCATHHHESAH----- 173
IN A + + +++ VL G ++L+RI D E H H HE
Sbjct: 178 KINPYAKIHHTERCQIEIGDVLDRGAFELDRILDLDPEFLKKAEH--AHDHECGPDCDHD 235
Query: 174 ---------------------GHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERL 212
G H H H +V S + + G L+ DW+ ++
Sbjct: 236 HHHHGHDHGHAHDHDHPDHECGPDCDHDHEDTH--SVKSFSFTA-GDLEPKVFFDWINQV 292
Query: 213 IEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDE 272
+ +G ++ RMKGIL+ Q+YV QG+H ++G + W DEKR +++VFIGR LD
Sbjct: 293 TQIQGPNILRMKGILAFKDDPQRYVVQGIHMIVEGNHQRDWKDDEKRESRIVFIGRELDG 352
Query: 273 TALRKGFKGCLA 284
AL+ F+ C+A
Sbjct: 353 AALKTAFEACVA 364
>gi|89902208|ref|YP_524679.1| cobalamin synthesis protein, P47K [Rhodoferax ferrireducens T118]
gi|89346945|gb|ABD71148.1| cobalamin synthesis protein, P47K [Rhodoferax ferrireducens T118]
Length = 351
Score = 189 bits (481), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 169/299 (56%), Gaps = 26/299 (8%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQG--QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCT+R DL + L L AKK+QG FD +VIETTGLA P PV +TF D+ +++
Sbjct: 61 MNNGCICCTIREDLREALQLLAAKKRQGLLDFDRVVIETTGLADPGPVAQTFFMDDEIAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD ++TLVD+KHAM L+E + EA QV +AD+I ++K DLV E+ +L
Sbjct: 121 SYLLDSILTLVDAKHAMTQLDERQ------EARRQVGFADQIFISKTDLVAADEVDALMH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHE-SAHGHHE 177
R+KH+N AP K +G + V + G++L ++++ +D H+ H H E
Sbjct: 175 RLKHMNPRAPQKAVHFGEAALSEVFDLRGFNL---NAKLDIDPDFLTEEAHDHEGHDHPE 231
Query: 178 ---GHHHNH----------MHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMK 224
G H +H H+ V S SE D +++D+L ++ G + R K
Sbjct: 232 HAPGEHCDHPSHQHGGHHHHHEDDVKSFVFKSERAFDPAKLEDFLGAIVNIYGPRMLRYK 291
Query: 225 GILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
G+L + G++++ +FQGVH + G AW E R++K+VFIG +L + +G + CL
Sbjct: 292 GVLLMKGTDRKVIFQGVHQLMGSDLGPAWAAGEPRVSKMVFIGIDLPQDIFLQGMEQCL 350
>gi|163758920|ref|ZP_02166007.1| hypothetical protein HPDFL43_15892 [Hoeflea phototrophica DFL-43]
gi|162284210|gb|EDQ34494.1| hypothetical protein HPDFL43_15892 [Hoeflea phototrophica DFL-43]
Length = 362
Score = 189 bits (481), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 172/305 (56%), Gaps = 30/305 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA PAPV +TF D+ V +
Sbjct: 66 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDAIIVETTGLADPAPVAQTFFMDDDVRSKTR 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD++H L + + EA +Q+A+AD ++LNK DLV+ EL ++ ++
Sbjct: 125 LDAVVALVDARHLPARLKDSR------EAEDQIAFADVVLLNKTDLVSPEELEAVERIVR 178
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHV----DNSHCATHH-------- 168
IN A + + SV +D VL G +DL R +D++ H D H T
Sbjct: 179 AINPSARIHRTERASVALDAVLDRGAFDLSRALDNDPHFLDHDDPDHVCTPDCDHDHSHD 238
Query: 169 ---------HESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGED 219
H+ H+ +HD + S+++ + G L+ W+E++ + G
Sbjct: 239 HHGHDHHHAHDHDGHGHKHAAPAAIHDLTIESISLRT-GPLNPKRFFPWIEKITQIDGPK 297
Query: 220 LYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
+ R+KGI++ G + +YV QGVH ++G +AW DEKR +++VFIGR+LD L + F
Sbjct: 298 ILRLKGIIAFDGDDDRYVVQGVHMIVEGDHQRAWKDDEKRESRIVFIGRDLDREKLERTF 357
Query: 280 KGCLA 284
C A
Sbjct: 358 LACQA 362
>gi|420251560|ref|ZP_14754724.1| putative GTPase, G3E family [Burkholderia sp. BT03]
gi|398057441|gb|EJL49402.1| putative GTPase, G3E family [Burkholderia sp. BT03]
Length = 322
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 156/282 (55%), Gaps = 22/282 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVR DLV + L + + + +++ET+GLA PAPV++TF D V + V+
Sbjct: 62 INNGCVCCTVRTDLVASVRDLLTRFGDRLERLIVETSGLADPAPVLQTFLADPDVRERVE 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
L+ V+ ++D+ HA L++ + A EQV +ADRII+NK D+ + + +L ERI+
Sbjct: 122 LESVVAVIDALHADAQLDD-------DIAREQVVFADRIIVNKTDIASPQAVDALVERIR 174
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+N A V A + +V +D LGV + L+ + + V D A H HE
Sbjct: 175 QLNPTAQVDFANHSAVAVDSFLGVRSFSLDNLLA-VEPDLLDEAGHDHE----------- 222
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD ++S + G LD + W+ +L++ G L RMKG+L++ ++ F V
Sbjct: 223 ---HDDTIASCAFIVPGALDATRFNRWINQLVQTDGLQLLRMKGVLNLHDEARRLHFHSV 279
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H LD GKAW DE R N+ V IGRN+D +R G C+
Sbjct: 280 HMLLDAKFGKAWERDEHRENRFVMIGRNIDAERMRDGLLSCM 321
>gi|390572117|ref|ZP_10252342.1| cobalamin synthesis protein P47K [Burkholderia terrae BS001]
gi|389935905|gb|EIM97808.1| cobalamin synthesis protein P47K [Burkholderia terrae BS001]
Length = 312
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 157/282 (55%), Gaps = 22/282 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVR DLV + L + + + +++ET+GLA PAPV++TF D V + V+
Sbjct: 52 INNGCVCCTVRTDLVASVRDLLTRFGDRMERLIVETSGLADPAPVLQTFLADPDVRERVE 111
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
L+ V+ ++D+ HA L++ + A EQV +ADRII+NK D+ + + +L ERI+
Sbjct: 112 LESVVAVIDALHADAQLDD-------DIAREQVVFADRIIVNKTDIASPQAVDALVERIR 164
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+N A V A + +V +D +LGV + L+ + + V D A H HE
Sbjct: 165 ELNPTAQVDFANHSAVAVDSLLGVRSFSLDNLLA-VEPDLLDEAGHDHE----------- 212
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD ++S + G LD + W+ +L++ G L RMKG+L++ ++ F V
Sbjct: 213 ---HDDTIASCAFIVPGALDATRFNRWINQLVQTDGLQLLRMKGVLNLHDEARRLHFHSV 269
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H LD GKAW DE R N+ V IGRN+D +R G C+
Sbjct: 270 HMLLDAKFGKAWERDEHRENRFVMIGRNIDAERMRDGLLSCM 311
>gi|449452867|ref|XP_004144180.1| PREDICTED: COBW domain-containing protein 1-like [Cucumis sativus]
Length = 374
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 160/292 (54%), Gaps = 27/292 (9%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CCTV+ LV+ L QL ++K+ + DHI++ETTGLA PAP+ D+ + +KLD
Sbjct: 93 NGCICCTVKHSLVQALEQLVQRKE-RLDHILLETTGLANPAPLASVLWLDDQLESSIKLD 151
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVT-----------ETE 112
+IT+VD+K+ LNE + EA Q+ +AD IILNK+DLV+ E E
Sbjct: 152 SIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFADTIILNKVDLVSSDRGDGALEDLEYE 211
Query: 113 LGSLTERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESA 172
+ ++ I++IN++A + + VD+ +L Y+ T H E+
Sbjct: 212 IRNINSLIRNINSLAKIIHSVRCQVDLSLILDCNSYN-------------AANTAHLEAL 258
Query: 173 HGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK--GEDLYRMKGILSVS 230
+HD+ V ++ I + +DLD+V WLE ++ EK G D+YR KG+LS+
Sbjct: 259 LKESRSLSTQDLHDTGVRTLCISEDDKVDLDKVHSWLEEILWEKKGGMDVYRCKGVLSIK 318
Query: 231 GSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
S+Q + Q V + P + W E + NK+VFIGRNL+E L K F+ C
Sbjct: 319 NSDQLHTLQAVRELYEIVPTRQWNNGESQTNKIVFIGRNLNEDVLSKTFREC 370
>gi|395779396|ref|ZP_10459877.1| hypothetical protein MCU_01578 [Bartonella elizabethae Re6043vi]
gi|423716166|ref|ZP_17690381.1| hypothetical protein MEE_01571 [Bartonella elizabethae F9251]
gi|395415832|gb|EJF82258.1| hypothetical protein MCU_01578 [Bartonella elizabethae Re6043vi]
gi|395426722|gb|EJF92846.1| hypothetical protein MEE_01571 [Bartonella elizabethae F9251]
Length = 343
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 169/290 (58%), Gaps = 21/290 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L ++ +FD I+IETTGLA P PV +TF D+ V +
Sbjct: 65 MNNGCVCCTVRGDLIRILESLMQRSH-RFDAIIIETTGLADPVPVAQTFFMDDTVHEKTT 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI +VD+KH L + E EQ+A+AD I+LNKIDLVT E I
Sbjct: 124 LDSVIAVVDAKHLSSQLKNSR------EVEEQIAFADIILLNKIDLVTAQEQAHAESLIL 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHVDNSHCATHHHESAHGHH---- 176
IN A + + ++ +D +L G +DL+R +D E H H H++ H
Sbjct: 178 AINPRAILYTTQRTNIPLDKLLNRGFFDLQRTLDHE-----PHFLDHEHKNQPEDHVCGP 232
Query: 177 EGHHHNHMHDSAVSSVTIVS----EGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGS 232
+ HH +H H S + +TI S G L ++ W+++L +++G D+ R+KGI++ G
Sbjct: 233 DCHHDHHHHTSTIHDITITSISLKAGALQPEKFFPWIQQLTQQQGPDILRLKGIIAFQGD 292
Query: 233 EQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
+ +YV QG+H L+G + W DEKR ++LVFIGR+LD L+ F+ C
Sbjct: 293 DDRYVIQGIHMLLEGQHQRPWREDEKRESRLVFIGRSLDGEKLKTDFENC 342
>gi|13474299|ref|NP_105867.1| hypothetical protein mll5156 [Mesorhizobium loti MAFF303099]
gi|14025051|dbj|BAB51653.1| mll5156 [Mesorhizobium loti MAFF303099]
Length = 435
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 170/298 (57%), Gaps = 23/298 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V K
Sbjct: 146 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRSKTK 204
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + K EA +Q+A+AD ++LNK DLVT EL + I+
Sbjct: 205 LDAVVALVDAKHLPLRLKDSK------EAEDQIAFADVVVLNKTDLVTPEELAKVEATIR 258
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHV--------------DNSHCAT 166
IN A + V + VL G +DL R ++++ H +
Sbjct: 259 AINPAAKIHRTTRAGVALSEVLDRGAFDLSRALENDPHFLEGHDDHDHHDHDHHDHDGHH 318
Query: 167 HHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGI 226
HH H HH H + +HD V SV++ G +D + W+E++ + +G ++ R+KGI
Sbjct: 319 HHDHDGHDHHHHDHPSDIHDVTVQSVSLRG-GEMDPKKFFPWIEKITQMEGPNILRLKGI 377
Query: 227 LSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+++ G +++YV QGVH ++G +AW EK ++LVFIGR LD L+K F C A
Sbjct: 378 IALKGDDERYVIQGVHMIIEGDHQRAWKDGEKHESRLVFIGRELDAERLKKSFDACQA 435
>gi|359789280|ref|ZP_09292231.1| cobalamin synthesis protein P47K [Mesorhizobium alhagi CCNWXJ12-2]
gi|359254892|gb|EHK57858.1| cobalamin synthesis protein P47K [Mesorhizobium alhagi CCNWXJ12-2]
Length = 355
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 168/299 (56%), Gaps = 24/299 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF DE V
Sbjct: 64 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDAIIVETTGLADPVPVAQTFFMDEDVRSKTS 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD ++LNK DLVT EL + ++
Sbjct: 123 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVVLNKTDLVTPEELRDVEAAVR 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN A + V +D VL G +DL+R ++++ H +H H HE HH
Sbjct: 177 AINPAAKIHRTTRAGVKLDEVLDRGAFDLKRALENDPHFLEAHDHDHDHECGPDCDHDHH 236
Query: 181 H---------------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKG 225
H + +HD V SV++ G +D + W+E++ + +G ++ R+KG
Sbjct: 237 HHDHDHHHSHSGHGAVSPIHDVTVQSVSLRG-GEMDSKKFFPWIEKITQMEGPNILRLKG 295
Query: 226 ILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
I++ ++YV QGVH ++G +AW EK ++LVFIGR LD L+ F C A
Sbjct: 296 IIAFKDDPERYVVQGVHMIVEGDHQRAWKDGEKHESRLVFIGRELDAERLKNSFDACQA 354
>gi|311109410|ref|YP_003982263.1| CobW/HypB/UreG, nucleotide-binding domain-containing protein 5
[Achromobacter xylosoxidans A8]
gi|310764099|gb|ADP19548.1| CobW/HypB/UreG, nucleotide-binding domain protein 5 [Achromobacter
xylosoxidans A8]
Length = 372
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 177/313 (56%), Gaps = 39/313 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCTVRGDL++ L +L AK++ G+ F+ +++ETTG+A P PV +TF D+ +++
Sbjct: 68 LSNGCVCCTVRGDLMRTLSELRAKREAGELNFERVILETTGMANPGPVCQTFFMDDDIAE 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
Y +LD V+T+VD+KH M L + +P EA +QV +ADRI+++K DLV E + +L
Sbjct: 128 YYRLDAVVTVVDAKHGMATL-DAQP-----EAQKQVGFADRILISKRDLVNEVDYEALRH 181
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHES------- 171
R+ H+N AP+ +G VD+ ++ + G++L I + +D A H ++
Sbjct: 182 RLVHMNPRAPITPVNFGEVDLKSIIDISGFNLNSI---LDIDPQFLADEHPDAAHDHVHD 238
Query: 172 --------------------AHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLER 211
AH +H HHH+H HD + + S D ++++L
Sbjct: 239 HDHGHDHGHDHDHDHEGDCGAHCNHAHHHHHHQHDDEIGAFVFRSNKPFDPARLEEFLGG 298
Query: 212 LIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLD 271
+++ G DL R KGIL + G ++ +FQGVH + PGK W EK K+VFIGR L
Sbjct: 299 VVQVYGPDLMRYKGILYMKGINRRMLFQGVHMMMGAEPGKPWTAAEKPSTKMVFIGRKLP 358
Query: 272 ETALRKGFKGCLA 284
+ +G + CLA
Sbjct: 359 QEIFTRGLEQCLA 371
>gi|23100888|ref|NP_694355.1| hypothetical protein OB3433 [Oceanobacillus iheyensis HTE831]
gi|22779122|dbj|BAC15389.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 323
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 169/289 (58%), Gaps = 34/289 (11%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQG--QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+N GC+CC VR DL+ L + L ++QG +FD ++IETTGLA PAP+++TF D + +
Sbjct: 62 INKGCICCNVRKDLIDTLSMLLFTREQGMIEFDRVLIETTGLADPAPIVQTFLMDPKMIE 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+D V T+VDSKH HL++ +E++ Q+A++D I+LNKIDL++ +L L E
Sbjct: 122 SYDIDSVCTIVDSKHISMHLDQK------DESLSQIAFSDNILLNKIDLISSEQLEKLKE 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEVHVDNSHCATHHHESAHGH 175
RI IN A + ++D++ V + +DL+ RI S
Sbjct: 176 RITKINPFANIYETTKSNIDINKVFNLYSFDLKDKLRI-----------------SPTFL 218
Query: 176 HEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQ 235
H+ HHH HD+ V+S++++ LDL++++ W L++ GE LYR KGIL ++G ++
Sbjct: 219 HDTHHH---HDN-VTSLSLIETKPLDLEKLNLWFSYLVQILGESLYRYKGILYINGKRRK 274
Query: 236 YVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
Y+FQGVH WG R +++VFIG++L++ L++ F C++
Sbjct: 275 YIFQGVHMLFAAEEQAEWGDMSPR-SEIVFIGKDLNKQKLKEQFHKCIS 322
>gi|33599172|ref|NP_886732.1| hypothetical protein BB0181 [Bordetella bronchiseptica RB50]
gi|33575218|emb|CAE30681.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
Length = 369
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 174/309 (56%), Gaps = 36/309 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCTVRGDL++ L L A+++ G+ F+ ++IETTG+A P PV +TF D+ +++
Sbjct: 68 LSNGCVCCTVRGDLMRTLSDLRARREAGELSFERVIIETTGMANPGPVCQTFFMDDDIAE 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
Y +LD V+T+VD+KH M L+ +EA +QV +ADRI+++K DLV + + +L +
Sbjct: 128 YYRLDAVVTVVDAKHGMATLD------AQDEAQKQVGFADRILVSKKDLVNDVDYAALHQ 181
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESA------ 172
R+ IN AP+ +G D+ ++ + G++L I + +D + A H ++A
Sbjct: 182 RLVRINPRAPITPVHFGEADLKSIIDISGFNLNSI---LDIDPAFLADEHPDAAHDHHDH 238
Query: 173 ------------------HGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIE 214
H +H HHH+ HD + + S D ++++L +++
Sbjct: 239 DHGHGHEHDHDHEGECGAHCNHHHHHHHAHHDDEIGAFVFRSNKPFDPARLEEFLGGVVQ 298
Query: 215 EKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETA 274
G DL R KGIL + G ++ +FQGVH + PGKAW EK K+VFIGR L +
Sbjct: 299 VYGPDLLRYKGILYMKGINRRMLFQGVHMMMGAEPGKAWTAAEKPSTKMVFIGRKLPQEI 358
Query: 275 LRKGFKGCL 283
+G + CL
Sbjct: 359 FTRGLEQCL 367
>gi|395762424|ref|ZP_10443093.1| cobalamin synthesis protein P47K [Janthinobacterium lividum PAMC
25724]
Length = 325
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/285 (37%), Positives = 163/285 (57%), Gaps = 26/285 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQ---FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CC+VRGDL+++L QL K+ + FDH++IETTGLA P PV +TF + VS+
Sbjct: 62 MNNGCICCSVRGDLIRILGQLQAKRAARTIAFDHVIIETTGLAAPGPVAQTFFAEPSVSE 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+ LD ++T+VD++HA + L + EA EQV +ADRI+L+K DLV + EL +L +
Sbjct: 122 FYMLDAILTVVDARHAQEQLT------LHQEAQEQVGFADRILLSKTDLVGKDELAALRQ 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN A ++ ++G V + +L + G+ L I V ++ E H H +G
Sbjct: 176 RLFAINGRARIQKVRFGHVPLRDILNIRGFHLSAI---VELEPDFLG----ELGHRHGDG 228
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H S LDL +V+++L+ +++ G L R KGIL V+ + VF
Sbjct: 229 VQSFVYHQSQ----------ALDLLQVENFLDAVVQLFGSQLMRYKGILYVADVPCRAVF 278
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH + G W E R +K++FIGR+L + L +G C+
Sbjct: 279 QGVHMLMGSELGAPWRDGETRASKIIFIGRDLPQQMLTRGLDRCV 323
>gi|422673718|ref|ZP_16733076.1| cobalamin synthesis protein CobW [Pseudomonas syringae pv. aceris
str. M302273]
gi|330971450|gb|EGH71516.1| cobalamin synthesis protein CobW [Pseudomonas syringae pv. aceris
str. M302273]
Length = 322
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 164/281 (58%), Gaps = 25/281 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L +++ + D I+IETTGLA PAPV +TF D+ + + +
Sbjct: 63 MNNGCICCTVRGDLIRILGALMRRRD-RIDCILIETTGLADPAPVAQTFFVDDDIKRSLA 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD +I +VD+ + Q + + +EAVEQVA+AD I+LNK D+VT +L S I+
Sbjct: 122 LDSIIAVVDAGNFAQQIQDS------HEAVEQVAFADLIVLNKSDVVTPEQLQSTMALIR 175
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN ++ A G V ++ +L G +DL RI + ++ HE
Sbjct: 176 SINPTVNIEPAVRGRVAVEQLLDRGQFDLSRI---LELEPEFLGDVSHE----------- 221
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGS-EQQYVFQG 240
HDS + S+++ +E +D + W+ L++ +G+++ R KGIL ++ FQ
Sbjct: 222 ---HDSEIVSLSLTAEQPIDQGKFSSWIGDLLQREGQNILRSKGILDFGAQHAARFAFQA 278
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
VH DG + W DE R++K+VFIGR+LD++A+R GF
Sbjct: 279 VHMAADGEFVRPWAIDEVRVSKMVFIGRHLDQSAIRAGFAA 319
>gi|110635175|ref|YP_675383.1| cobalamin synthesis protein, P47K [Chelativorans sp. BNC1]
gi|110286159|gb|ABG64218.1| cobalamin synthesis protein, P47K [Chelativorans sp. BNC1]
Length = 354
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 171/304 (56%), Gaps = 34/304 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L ++ G+FD I++ETTGLA PAPV +TF D+ V K
Sbjct: 64 MNNGCVCCTVRGDLVRVVEGLTRRP-GRFDAIIVETTGLADPAPVAQTFFMDDDVRAKTK 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD ++LNK DLV+ EL ++ ++
Sbjct: 123 LDAVVALVDAKHLPLRLKDSR------EAADQIAFADVVVLNKTDLVSPEELATVEAAVR 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHHES 171
IN A + + V + VL G +DL+R D HV C HH
Sbjct: 177 QINPSARIHKTERAGVALSDVLDRGAFDLQRALDNDPHFLDHDDPDHVCGPDCDHDHHHH 236
Query: 172 -----------AHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDL 220
AHG + +HD V+S+++ + G +D + W+++ + G ++
Sbjct: 237 HHDHDHDHHHHAHGGL-----SPIHDVGVTSISLRA-GEMDPKKFFPWIQKTTQMDGPNI 290
Query: 221 YRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
R+KGI+++ +YV QGVH ++G +AW EKR ++LVFIGR+L+ L++ F+
Sbjct: 291 LRLKGIIALKDDPDRYVVQGVHMIVEGDHQRAWKEGEKRESRLVFIGRDLETERLKRTFE 350
Query: 281 GCLA 284
C A
Sbjct: 351 ACQA 354
>gi|357025923|ref|ZP_09088034.1| cobalamin synthesis protein P47K [Mesorhizobium amorphae
CCNWGS0123]
gi|355542232|gb|EHH11397.1| cobalamin synthesis protein P47K [Mesorhizobium amorphae
CCNWGS0123]
Length = 352
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 173/296 (58%), Gaps = 21/296 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V +
Sbjct: 64 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRSKTR 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + K EA +Q+A+AD ++LNK DLVT EL + I+
Sbjct: 123 LDAVVALVDAKHLPLRLKDSK------EAEDQIAFADVVVLNKTDLVTPDELAKVEATIR 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHV------------DNSHCATHH 168
IN A + V + VL G +DL R ++++ H D+ H HH
Sbjct: 177 AINPAARIHRTTRAGVALAEVLDRGAFDLSRALENDPHFLEAHDGHDHDHHDHDHDHHHH 236
Query: 169 HESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILS 228
H HH H + +HD V SV++ G +D + W+E++ + +G ++ R+KGI++
Sbjct: 237 DHDGHDHHHHDHPSDIHDVTVQSVSLRG-GEMDPKKFFPWIEKITQMEGPNILRLKGIIA 295
Query: 229 VSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+ G +++YV QGVH ++G +AW EK ++LVFIGR LD L+K F+ C A
Sbjct: 296 LKGDDERYVIQGVHMIIEGDHQRAWKDGEKHESRLVFIGRELDAERLKKSFEACQA 351
>gi|407779048|ref|ZP_11126307.1| cobalamin synthesis protein, P47K [Nitratireductor pacificus
pht-3B]
gi|407299085|gb|EKF18218.1| cobalamin synthesis protein, P47K [Nitratireductor pacificus
pht-3B]
Length = 364
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/301 (38%), Positives = 172/301 (57%), Gaps = 26/301 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDLV+++ L ++ G+FD I++ETTGLA PAPV +TF D+ V K
Sbjct: 72 MNNGCICCTVRGDLVRVVEGLMRRP-GRFDAIIVETTGLADPAPVAQTFFMDDDVRAKTK 130
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + NEA +Q+A+AD ++LNK DLVT EL ++ ++
Sbjct: 131 LDAVVALVDAKHLPLRLKDS------NEAEDQIAFADVVVLNKTDLVTPEELATVEATVR 184
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVH-VDNSH----CATH-------- 167
IN A + + V + VL G +DL R +D++ H +D+ H C
Sbjct: 185 AINPSARIHRTERAGVALSDVLDRGAFDLSRALDNDPHFLDHDHPDHVCGPDCDHDHHHH 244
Query: 168 ----HHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRM 223
HH H HH + +HD+ V S+++ G +D + W+E+ + G ++ R+
Sbjct: 245 HDHDHHGHDHHHHHHGEASPIHDAGVKSISLRG-GEMDPKKFLPWIEKTTQMDGPNILRL 303
Query: 224 KGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
KGI++ + ++V QGVH L+G +AW EKR +LVFIGR LD L + F+ C
Sbjct: 304 KGIVAFADDPDRFVVQGVHMILEGDHQRAWKEGEKRETRLVFIGRELDTERLTRTFEACQ 363
Query: 284 A 284
A
Sbjct: 364 A 364
>gi|118588444|ref|ZP_01545853.1| hypothetical protein SIAM614_24222 [Stappia aggregata IAM 12614]
gi|118439150|gb|EAV45782.1| hypothetical protein SIAM614_24222 [Stappia aggregata IAM 12614]
Length = 388
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/315 (35%), Positives = 171/315 (54%), Gaps = 50/315 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++ + L K+K FD I++ETTG+A PAPV +TF D+ V K
Sbjct: 91 MNNGCICCTVRGDLIRTVQNLMKRKNA-FDAIIVETTGVADPAPVAQTFFMDDDVRAAAK 149
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ +VD++H +Q L + + EA +Q+A+AD I++NK DLV+ EL ++ RI+
Sbjct: 150 LDAVVAVVDARHVLQRLEDTE------EAEDQIAFADVILVNKTDLVSAEELATVEARIR 203
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGH-- 179
IN A + ++ +D+ VL G +DL+RI + H HGHH
Sbjct: 204 SINPYAVLHQSERCGIDIAKVLDRGAFDLDRI----------LSLDPHFLEHGHHADECG 253
Query: 180 ------------------------------HHNHMHDSAVSSVTIVSEGTLDLDEVDDWL 209
HH+H +V S+++ G LD + W+
Sbjct: 254 PDCDHDHHHDHDHHHGHGHEHGHGHGHGHHHHHHDDPHSVKSISL-KAGDLDPNMFFPWI 312
Query: 210 ERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRN 269
++ + +G ++ R+KGIL+ G Q+YV QGVH ++G + W DE R ++LVFIGR+
Sbjct: 313 NQVTQVQGPNILRLKGILAFKGDPQRYVIQGVHMIVEGDHQRDWKDDEPRESRLVFIGRD 372
Query: 270 LDETALRKGFKGCLA 284
L+ L+ F+ C A
Sbjct: 373 LNWDVLKDSFQACAA 387
>gi|374333158|ref|YP_005083342.1| Cobalamin (vitamin B12) biosynthesis CobW [Pseudovibrio sp.
FO-BEG1]
gi|359345946|gb|AEV39320.1| Cobalamin (vitamin B12) biosynthesis CobW [Pseudovibrio sp.
FO-BEG1]
Length = 371
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 170/319 (53%), Gaps = 49/319 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++ + L K+K G FD I++ETTG+A PAPV +TF D+ V + K
Sbjct: 65 MNNGCICCTVRGDLIRTVENLMKRK-GAFDAIIVETTGVADPAPVAQTFFMDDDVREAAK 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ +VD++H Q L + K EA +Q+A++D I+LNK DLV+ EL + I+
Sbjct: 124 LDAVVAVVDARHVQQRLKDTK------EAEDQIAFSDVILLNKTDLVSAEELVGVEAAIR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGH-- 179
IN A + + +++ VL G ++L+RI + +D H AH H G
Sbjct: 178 KINPYAKIHHTERCQIEIGDVLDRGAFELDRI---LDLDPEFLKKAEH--AHDHECGPDC 232
Query: 180 ----------------------------------HHNHMHDSAVSSVTIVSEGTLDLDEV 205
H+H +V S + + G L+
Sbjct: 233 DHDHHHHGHDHGHAHDHDHAHDHDHPDHECGPDCDHDHEDTHSVKSFSFTA-GDLEPKVF 291
Query: 206 DDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVF 265
DW+ ++ + +G ++ RMKGIL+ Q+YV QG+H ++G + W DEKR +++VF
Sbjct: 292 FDWINQVTQIQGPNILRMKGILAFKDDPQRYVVQGIHMIVEGNHQRDWKDDEKRESRIVF 351
Query: 266 IGRNLDETALRKGFKGCLA 284
IGR LD AL+ F+ C+A
Sbjct: 352 IGRELDGAALKTAFEACVA 370
>gi|261318354|ref|ZP_05957551.1| cobalamin synthesis protein P47K [Brucella pinnipedialis B2/94]
gi|265986153|ref|ZP_06098710.1| cobalamin synthesis protein P47K [Brucella pinnipedialis M292/94/1]
gi|340792752|ref|YP_004758216.1| cobalamin synthesis protein/P47K family [Brucella pinnipedialis
B2/94]
gi|261297577|gb|EEY01074.1| cobalamin synthesis protein P47K [Brucella pinnipedialis B2/94]
gi|264658350|gb|EEZ28611.1| cobalamin synthesis protein P47K [Brucella pinnipedialis M292/94/1]
gi|340561211|gb|AEK56448.1| cobalamin synthesis protein/P47K family [Brucella pinnipedialis
B2/94]
Length = 379
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 172/317 (54%), Gaps = 42/317 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V
Sbjct: 71 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRAKTG 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL ++ ++
Sbjct: 130 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPEELAAVEATVR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHH-- 169
IN A + + S+ +D VL G +DL+R+ D HV C HH
Sbjct: 184 AINPHAIIHRTERASIPLDRVLDRGAFDLKRVLDNDPHFLDHDDPDHVCGPDCDHDHHHH 243
Query: 170 ----------------------ESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDD 207
H+ H + +HD V SV++ + G +D +
Sbjct: 244 GHHHHGHDHHHHDHHDHDHVCGPDCDHDHDHDHASPIHDVTVKSVSLRT-GEIDPAKFFP 302
Query: 208 WLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIG 267
W++ + + +G ++ R+KGI++ +YV QGVH ++G +AW P+EK ++LVFIG
Sbjct: 303 WIQNITQTQGPNILRLKGIIAFKDDPDRYVVQGVHMIIEGDHQRAWKPEEKHESRLVFIG 362
Query: 268 RNLDETALRKGFKGCLA 284
R LD AL+ GF+ C A
Sbjct: 363 RELDPAALKAGFENCRA 379
>gi|310642068|ref|YP_003946826.1| prli-interacting factor l [Paenibacillus polymyxa SC2]
gi|386041042|ref|YP_005959996.1| GTP-binding protein yjiA [Paenibacillus polymyxa M1]
gi|309247018|gb|ADO56585.1| PRLI-interacting factor L-like protein [Paenibacillus polymyxa SC2]
gi|343097080|emb|CCC85289.1| uncharacterized GTP-binding protein yjiA [Paenibacillus polymyxa
M1]
Length = 336
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 160/287 (55%), Gaps = 28/287 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQ------FDHIVIETTGLAKPAPVIETFCTDEL 55
+NNGC+CCTVR DLV ++ L +K + +D IV+ETTGLA P PVI+TF + L
Sbjct: 65 MNNGCICCTVRSDLVDIMKSLLHRKFAETLTPVEYDRIVVETTGLADPGPVIQTFLAEPL 124
Query: 56 VSQYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGS 115
+S + K+D VIT+VD+KHA HL+ +EA EQVA+AD I+LNKIDLV + ++
Sbjct: 125 ISNFFKIDAVITVVDAKHAEHHLDNG------HEAKEQVAFADFILLNKIDLVEKEDIAR 178
Query: 116 LTERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGH 175
L R+K +N+ A + +D+D + GV +DL D ++ VD HHH
Sbjct: 179 LESRLKKMNSHARLTHTHQSLIDLDQIFGVNTFDL---DHKLEVDPHLLEEHHHHHHD-- 233
Query: 176 HEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQ 235
+ S+ + LDLD+V+ ++ + E D YR KGIL+V + ++
Sbjct: 234 -----------DDIFSIILTETRPLDLDKVNKFINDWLVEHSADTYRYKGILNVQKTNKR 282
Query: 236 YVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
VFQGVH + W DE R +++V IG++LDE R F C
Sbjct: 283 VVFQGVHMIFGVDTDREWNVDEDRTSRIVVIGKDLDEDWFRARFSEC 329
>gi|62317192|ref|YP_223045.1| cobalamin synthesis protein/P47K family protein [Brucella abortus
bv. 1 str. 9-941]
gi|260756270|ref|ZP_05868618.1| cobalamin synthesis protein P47K [Brucella abortus bv. 6 str. 870]
gi|260759697|ref|ZP_05872045.1| cobalamin synthesis protein P47K [Brucella abortus bv. 4 str. 292]
gi|260762938|ref|ZP_05875270.1| cobalamin synthesis protein P47K [Brucella abortus bv. 2 str.
86/8/59]
gi|260882092|ref|ZP_05893706.1| cobalamin synthesis protein P47K [Brucella abortus bv. 9 str. C68]
gi|297249244|ref|ZP_06932945.1| zinc transporter [Brucella abortus bv. 5 str. B3196]
gi|423168923|ref|ZP_17155625.1| hypothetical protein M17_02612 [Brucella abortus bv. 1 str. NI435a]
gi|423171644|ref|ZP_17158318.1| hypothetical protein M19_02176 [Brucella abortus bv. 1 str. NI474]
gi|423174626|ref|ZP_17161296.1| hypothetical protein M1A_02023 [Brucella abortus bv. 1 str. NI486]
gi|423176503|ref|ZP_17163169.1| hypothetical protein M1E_00765 [Brucella abortus bv. 1 str. NI488]
gi|423181073|ref|ZP_17167713.1| hypothetical protein M1G_02172 [Brucella abortus bv. 1 str. NI010]
gi|423184206|ref|ZP_17170842.1| hypothetical protein M1I_02174 [Brucella abortus bv. 1 str. NI016]
gi|423187355|ref|ZP_17173968.1| hypothetical protein M1K_02172 [Brucella abortus bv. 1 str. NI021]
gi|423189777|ref|ZP_17176386.1| hypothetical protein M1M_01458 [Brucella abortus bv. 1 str. NI259]
gi|62197385|gb|AAX75684.1| cobalamin synthesis protein/P47K family protein [Brucella abortus
bv. 1 str. 9-941]
gi|260670015|gb|EEX56955.1| cobalamin synthesis protein P47K [Brucella abortus bv. 4 str. 292]
gi|260673359|gb|EEX60180.1| cobalamin synthesis protein P47K [Brucella abortus bv. 2 str.
86/8/59]
gi|260676378|gb|EEX63199.1| cobalamin synthesis protein P47K [Brucella abortus bv. 6 str. 870]
gi|260871620|gb|EEX78689.1| cobalamin synthesis protein P47K [Brucella abortus bv. 9 str. C68]
gi|297173113|gb|EFH32477.1| zinc transporter [Brucella abortus bv. 5 str. B3196]
gi|374536066|gb|EHR07586.1| hypothetical protein M19_02176 [Brucella abortus bv. 1 str. NI474]
gi|374538129|gb|EHR09639.1| hypothetical protein M17_02612 [Brucella abortus bv. 1 str. NI435a]
gi|374539195|gb|EHR10701.1| hypothetical protein M1A_02023 [Brucella abortus bv. 1 str. NI486]
gi|374545663|gb|EHR17123.1| hypothetical protein M1G_02172 [Brucella abortus bv. 1 str. NI010]
gi|374546506|gb|EHR17965.1| hypothetical protein M1I_02174 [Brucella abortus bv. 1 str. NI016]
gi|374553518|gb|EHR24933.1| hypothetical protein M1E_00765 [Brucella abortus bv. 1 str. NI488]
gi|374555159|gb|EHR26568.1| hypothetical protein M1K_02172 [Brucella abortus bv. 1 str. NI021]
gi|374555817|gb|EHR27222.1| hypothetical protein M1M_01458 [Brucella abortus bv. 1 str. NI259]
Length = 379
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 172/317 (54%), Gaps = 42/317 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V
Sbjct: 71 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRAKTG 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL ++ ++
Sbjct: 130 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPEELAAVEATVR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHH-- 169
IN A + + S+ +D VL G +DL+R+ D HV C HH
Sbjct: 184 AINPHAIIHRTERASIPLDRVLDRGAFDLKRVLDNDPHFLDHDDPDHVCGPDCDHDHHHQ 243
Query: 170 ----------------------ESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDD 207
H+ H + +HD V SV++ + G +D +
Sbjct: 244 GHHHHGHDHHHHDHHDHDHVCGPDCDHDHDHDHASPIHDVTVKSVSLRT-GEIDPAKFFP 302
Query: 208 WLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIG 267
W++ + + +G ++ R+KGI++ +YV QGVH ++G +AW P+EK ++LVFIG
Sbjct: 303 WIQNITQTQGPNILRLKGIIAFKDDPDRYVVQGVHMIIEGDHQRAWKPEEKHESRLVFIG 362
Query: 268 RNLDETALRKGFKGCLA 284
R LD AL+ GF+ C A
Sbjct: 363 RELDPAALKAGFENCRA 379
>gi|410470981|ref|YP_006894262.1| hypothetical protein BN117_0178 [Bordetella parapertussis Bpp5]
gi|408441091|emb|CCJ47511.1| conserved hypothetical protein [Bordetella parapertussis Bpp5]
Length = 373
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 174/313 (55%), Gaps = 40/313 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCTVRGDL++ L L A+++ G+ F+ ++IETTG+A P PV +TF D+ +++
Sbjct: 68 LSNGCVCCTVRGDLMRTLSDLRARREAGELSFERVIIETTGMANPGPVCQTFFMDDDIAE 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
Y +LD V+T+VD+KH M L+ +EA +QV +ADRI+++K DLV + + +L +
Sbjct: 128 YYRLDAVVTVVDAKHGMATLD------AQDEAQKQVGFADRILVSKKDLVNDVDYAALHQ 181
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESA------ 172
R+ IN AP+ +G D+ ++ + G++L I + +D + A H ++A
Sbjct: 182 RLVRINPRAPITPVHFGEADLKSIIDISGFNLNSI---LDIDPAFLADEHPDAAHDHHDH 238
Query: 173 ----------------------HGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLE 210
H +H HHH+ HD + + S D ++++L
Sbjct: 239 DHGHGHGHGHEHDHDHEGECGAHCNHHHHHHHAHHDDEIGAFVFRSNKPFDPARLEEFLG 298
Query: 211 RLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNL 270
+++ G DL R KGIL + G ++ +FQGVH + PGKAW EK K+VFIGR L
Sbjct: 299 GVVQVYGPDLLRYKGILYMKGINRRMLFQGVHMMMGAEPGKAWTAAEKPSTKMVFIGRKL 358
Query: 271 DETALRKGFKGCL 283
+ +G + CL
Sbjct: 359 PQEIFTRGLEQCL 371
>gi|265992616|ref|ZP_06105173.1| cobalamin synthesis protein P47K [Brucella melitensis bv. 3 str.
Ether]
gi|262763486|gb|EEZ09518.1| cobalamin synthesis protein P47K [Brucella melitensis bv. 3 str.
Ether]
Length = 379
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 172/317 (54%), Gaps = 42/317 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V
Sbjct: 71 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRAKTG 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL ++ ++
Sbjct: 130 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPEELAAVEATVR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHH-- 169
IN A + + S+ +D VL G +DL+R+ D HV C HH
Sbjct: 184 AINPHAIIHRTERASIPLDRVLDRGAFDLKRVLDNDPHFLDHDDPDHVCGPDCDHDHHHH 243
Query: 170 ----------------------ESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDD 207
H+ H + +HD V SV++ + G +D +
Sbjct: 244 GHHHHGHDHHHHDHHDHDHVCGPDCDHDHDHDHASPIHDVTVKSVSLRT-GEIDPAKFFP 302
Query: 208 WLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIG 267
W++ + + +G ++ R+KGI++ +YV QGVH ++G +AW P+EK ++LVFIG
Sbjct: 303 WIQNITQTQGPNILRLKGIIAFKDDPDRYVVQGVHMIIEGDHQRAWKPEEKHESRLVFIG 362
Query: 268 RNLDETALRKGFKGCLA 284
R LD AL+ GF+ C A
Sbjct: 363 RELDPAALKAGFENCRA 379
>gi|261750677|ref|ZP_05994386.1| cobalamin synthesis protein P47K [Brucella suis bv. 5 str. 513]
gi|261740430|gb|EEY28356.1| cobalamin synthesis protein P47K [Brucella suis bv. 5 str. 513]
Length = 379
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 172/317 (54%), Gaps = 42/317 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V
Sbjct: 71 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRAKTG 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL ++ ++
Sbjct: 130 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPEELAAVEATVR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHH-- 169
IN A + + S+ +D VL G +DL+R+ D HV C HH
Sbjct: 184 AINPHAIIHRTERASIPLDRVLDRGAFDLKRVLDNDPHFLDHDDPDHVCGPDCDHDHHHY 243
Query: 170 ----------------------ESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDD 207
H+ H + +HD V SV++ + G +D +
Sbjct: 244 GHHHHGHDHHHHDHHDHDHVCGPDCDHDHDHDHASPIHDVTVKSVSLRT-GEIDPAKFFP 302
Query: 208 WLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIG 267
W++ + + +G ++ R+KGI++ +YV QGVH ++G +AW P+EK ++LVFIG
Sbjct: 303 WIQNITQTQGPNILRLKGIIAFKDDPDRYVVQGVHMIIEGDHQRAWKPEEKHESRLVFIG 362
Query: 268 RNLDETALRKGFKGCLA 284
R LD AL+ GF+ C A
Sbjct: 363 RELDPAALKAGFENCRA 379
>gi|412340521|ref|YP_006969276.1| hypothetical protein BN112_3232 [Bordetella bronchiseptica 253]
gi|408770355|emb|CCJ55148.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
Length = 371
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 171/311 (54%), Gaps = 38/311 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCTVRGDL++ L L +++ F+ ++IETTG+A P PV +TF D+ +++
Sbjct: 68 LSNGCVCCTVRGDLMRTLSDLRARREAGDLSFERVIIETTGMANPGPVCQTFFMDDDIAE 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
Y +LD V+T+VD+KH M L+ + EA +QV +ADRI+++K DLV + + +L +
Sbjct: 128 YYRLDAVVTVVDAKHGMATLDAQE------EAQKQVGFADRILVSKKDLVNDVDYAALHQ 181
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESA------ 172
R+ IN AP+ +G D+ ++ + G++L I + +D + A H ++A
Sbjct: 182 RLVRINPRAPITPVHFGEADLKSIIDISGFNLNSI---LDIDPAFLADEHPDAAHHHHDH 238
Query: 173 --------------------HGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERL 212
H +H HHH+ HD + + S D ++++L +
Sbjct: 239 DHGHDHGHEHDHDHEGECGAHCNHHHHHHHAHHDDEIGAFVFRSNKPFDPARLEEFLGGV 298
Query: 213 IEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDE 272
++ G DL R KGIL + G ++ +FQGVH + PGKAW EK K+VFIGR L +
Sbjct: 299 VQVYGPDLLRYKGILYMKGINRRMLFQGVHMMMGAEPGKAWTAAEKPSTKMVFIGRKLPQ 358
Query: 273 TALRKGFKGCL 283
+G + CL
Sbjct: 359 EIFTRGLEQCL 369
>gi|124266140|ref|YP_001020144.1| CobW protein involved in cobalamin synthesis [Methylibium
petroleiphilum PM1]
gi|124258915|gb|ABM93909.1| putative CobW protein involved in cobalamin synthesis [Methylibium
petroleiphilum PM1]
Length = 337
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 105/284 (36%), Positives = 158/284 (55%), Gaps = 14/284 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CC VRGDL++++ L ++ G+FD I+IET+GLA PAPVI+T D+ + Q+ +
Sbjct: 61 LNNGCVCCRVRGDLIRVMSGLIRRP-GRFDGIIIETSGLADPAPVIQTLHFDDFLRQHTQ 119
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
D VI + D++H + L EA Q+A AD ++LNK DL EL ++
Sbjct: 120 PDSVICVADARHLARQLQAAP------EAGAQLAQADLVLLNKCDLAKADELAVSEIAVE 173
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERID-SEVHVDNSHCATHHHESAHGHHEGHH 180
+N A V + G +++D ++G G +DL R+ + + H EG H
Sbjct: 174 RVNPTAEVVRCERGDIELDRLIGRGAFDLSRLRVPPLQIQRGRIGRVPHAYVE-VEEGRH 232
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
+ + V++ E D WL R + E GE L R KGI+S+ GSE+++VFQ
Sbjct: 233 GDGLR-----CVSLSIEQAFDPSLFVGWLLRFVRENGEHLLRGKGIVSLRGSEKRFVFQT 287
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
VH T+D +AW E R ++LVFIGR+L ALR+ + CLA
Sbjct: 288 VHMTVDSGMDRAWKDGEPRGSRLVFIGRDLSAIALREQLEACLA 331
>gi|421483828|ref|ZP_15931401.1| CobW/HypB/UreG, nucleotide-binding domain-containing protein 5
[Achromobacter piechaudii HLE]
gi|400198111|gb|EJO31074.1| CobW/HypB/UreG, nucleotide-binding domain-containing protein 5
[Achromobacter piechaudii HLE]
Length = 372
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 176/313 (56%), Gaps = 39/313 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCTVRGDL++ L +L AK++ G+ F+ +++ETTG+A P PV +TF D+ +++
Sbjct: 68 LSNGCVCCTVRGDLMRTLSELRAKREAGELNFERVILETTGMANPGPVCQTFFMDDDIAE 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
Y +LD V+T+VD+KH M L+ +P EA +QV +ADRI+++K DLV E + +L
Sbjct: 128 YYRLDAVVTVVDAKHGMATLD-AQP-----EAQKQVGFADRILISKRDLVNEVDYEALRH 181
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHE-------- 170
R+ H+N AP+ +G VD+ ++ + G++L I + +D A H +
Sbjct: 182 RLVHMNPRAPITPVNFGEVDLKSIIDISGFNLNSI---LDIDPEFLADEHPDAAHDHGHD 238
Query: 171 -------------------SAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLER 211
AH +H HHH+H HD + + S D ++++L
Sbjct: 239 HGHDHGHAHDHDHDHDGDCGAHCNHAHHHHHHQHDDEIGAFVFRSNKPFDPARLEEFLGG 298
Query: 212 LIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLD 271
+++ G DL R KGIL + G ++ +FQGVH + PGK W EK K+VFIGR L
Sbjct: 299 VVQVYGPDLMRYKGILYMKGINRRMLFQGVHMMMGAEPGKPWTAAEKPSTKMVFIGRKLP 358
Query: 272 ETALRKGFKGCLA 284
+ +G + CLA
Sbjct: 359 QEIFTRGLEQCLA 371
>gi|433614954|ref|YP_007191752.1| Putative GTPases (G3E family) [Sinorhizobium meliloti GR4]
gi|429553144|gb|AGA08153.1| Putative GTPases (G3E family) [Sinorhizobium meliloti GR4]
Length = 329
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 162/283 (57%), Gaps = 23/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++++ +FD I+IETTGLA PAPV +TF DE V +
Sbjct: 64 MNNGCICCTVRGDLIRIIEALMRRRE-RFDGILIETTGLADPAPVAQTFFVDEDVRSKTR 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD +IT+VD+KH + ++ +EA EQ A+AD IILNK DLV+ L ++ +RI+
Sbjct: 123 LDSIITVVDAKHLLGEIDRA------HEAQEQFAFADTIILNKTDLVSPEGLQAVEDRIR 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + + ++++ +L +DL+RI EV D H
Sbjct: 177 RINPTAGILKTQRCNLEIASLLDRNAFDLDRI-LEVEPDFLEADHDHEHD---------- 225
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
V+S ++V +D ++ WL+ G D+ RMKGI++ +G +YV QGV
Sbjct: 226 -----DHVASFSLVERRPVDPEKFFRWLQTTARAFGTDMLRMKGIIAFAGDTDRYVVQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
H ++G + W E+R+++LVFIGRNL + GF C A
Sbjct: 281 HMLVEGDHQRPWKEGEERVSRLVFIGRNLPKDVNTDGFMACCA 323
>gi|23500711|ref|NP_700151.1| cobalamin synthesis protein/P47K family protein [Brucella suis
1330]
gi|261753933|ref|ZP_05997642.1| cobalamin synthesis protein P47K [Brucella suis bv. 3 str. 686]
gi|376278932|ref|YP_005108965.1| cobalamin synthesis protein/P47K family protein [Brucella suis
VBI22]
gi|384223493|ref|YP_005614658.1| cobalamin synthesis protein/P47K family protein [Brucella suis
1330]
gi|23464362|gb|AAN34156.1| cobalamin synthesis protein/P47K family protein [Brucella suis
1330]
gi|261743686|gb|EEY31612.1| cobalamin synthesis protein P47K [Brucella suis bv. 3 str. 686]
gi|343384941|gb|AEM20432.1| cobalamin synthesis protein/P47K family protein [Brucella suis
1330]
gi|358260370|gb|AEU08103.1| cobalamin synthesis protein/P47K family protein [Brucella suis
VBI22]
Length = 374
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 172/312 (55%), Gaps = 37/312 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V
Sbjct: 71 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRAKTG 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL ++ ++
Sbjct: 130 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPEELAAVEATVR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHH-- 169
IN A + + S+ ++ VL G +DL+R+ D HV C HH
Sbjct: 184 AINPHAIIHHTERASIPLNRVLDRGAFDLKRVLDNDPHFLDHDDPDHVCGPDCDHDHHHH 243
Query: 170 -----------------ESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERL 212
H+ H + +HD V SV++ + G +D + W++ +
Sbjct: 244 GHDHHHHDHHDHDHVCGPDCDHDHDHDHASPIHDVTVKSVSLRT-GEIDPAKFFPWIQNI 302
Query: 213 IEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDE 272
+ +G ++ R+KGI++ +YV QGVH ++G +AW P+EK ++LVFIGR LD
Sbjct: 303 TQTQGPNILRLKGIIAFKDDPDRYVVQGVHMIIEGDHQRAWKPEEKHESRLVFIGRELDP 362
Query: 273 TALRKGFKGCLA 284
AL+ GF+ C A
Sbjct: 363 AALKAGFENCRA 374
>gi|408416961|ref|YP_006627668.1| hypothetical protein BN118_3192 [Bordetella pertussis 18323]
gi|410417983|ref|YP_006898432.1| hypothetical protein BN115_0170 [Bordetella bronchiseptica MO149]
gi|427817476|ref|ZP_18984539.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|427823216|ref|ZP_18990278.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|401779131|emb|CCJ64617.1| conserved hypothetical protein [Bordetella pertussis 18323]
gi|408445278|emb|CCJ56927.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
gi|410568476|emb|CCN16515.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|410588481|emb|CCN03540.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 369
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 173/309 (55%), Gaps = 36/309 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCTVRGDL++ L L A+++ G+ F+ ++IETTG+A P PV +TF D+ +++
Sbjct: 68 LSNGCVCCTVRGDLMRTLSDLRARREAGELSFERVIIETTGMANPGPVCQTFFMDDDIAE 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
Y +LD V+T+VD+KH M L+ + EA +QV +ADRI+++K DLV + + +L +
Sbjct: 128 YYRLDAVVTVVDAKHGMATLDAQE------EAQKQVGFADRILVSKKDLVNDVDYAALHQ 181
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHE-------- 170
R+ IN AP+ +G D+ ++ + G++L I + +D + A H +
Sbjct: 182 RLVRINPRAPITPVHFGEADLKSIIDISGFNLNSI---LDIDPAFLADEHPDAAHDHHDH 238
Query: 171 ----------------SAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIE 214
AH +H HHH+ HD + + S D ++++L +++
Sbjct: 239 DHGHGHDHDHDHEGECGAHCNHHHHHHHAHHDDEIGAFVFRSNKPFDPARLEEFLGGVVQ 298
Query: 215 EKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETA 274
G DL R KGIL + G ++ +FQGVH + PGKAW EK K+VFIGR L +
Sbjct: 299 VYGPDLLRYKGILYMKGINRRMLFQGVHMMMGAEPGKAWTAAEKPSTKMVFIGRKLPQEI 358
Query: 275 LRKGFKGCL 283
+G + CL
Sbjct: 359 FTRGLEQCL 367
>gi|329908664|ref|ZP_08274908.1| Putative GTPases (G3E family) [Oxalobacteraceae bacterium IMCC9480]
gi|327546662|gb|EGF31622.1| Putative GTPases (G3E family) [Oxalobacteraceae bacterium IMCC9480]
Length = 343
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 159/288 (55%), Gaps = 12/288 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCTVRGDL+ L LA ++ QFD +VIETTGLA P PV +TF D+ V+
Sbjct: 61 MNNGCICCTVRGDLIVGLTALAARRDAGELQFDRLVIETTGLANPGPVAQTFFIDDAVAS 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD VIT+VD+KHAM L+E + EA Q+ +ADRI+++K DLVTE + LT
Sbjct: 121 QYMLDAVITVVDAKHAMGQLDEHE------EAQRQIGFADRILISKSDLVTEEAMQQLTA 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLER---IDSEVHVDNSHCATHHHESAHGH 175
RI+ IN A + + +G + +L + G++L ID H H
Sbjct: 175 RIRRINPRAAIGNSDFGLTPIADILDIRGFNLNDKLDIDPAFLSQEEDHDHDHDHDCDDH 234
Query: 176 HEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQ 235
HH+ H + + S D +DD+L +++ G + R KG+L + G++++
Sbjct: 235 AGHDHHHSGHTDDIKAFVFKSLRAFDTARLDDFLGGIVQVYGPRMLRYKGVLVMDGADRK 294
Query: 236 YVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+FQGVH + G WG EKR +KLVFIG+NL E G + CL
Sbjct: 295 VLFQGVHQIMGSDVGARWGETEKRESKLVFIGKNLPEEIFIHGLEQCL 342
>gi|83269172|ref|YP_418463.1| cobalamin synthesis protein P47K [Brucella melitensis biovar
Abortus 2308]
gi|189022453|ref|YP_001932194.1| Cobalamin synthesis protein/P47K [Brucella abortus S19]
gi|237816752|ref|ZP_04595744.1| cobalamin synthesis protein P47K [Brucella abortus str. 2308 A]
gi|260544431|ref|ZP_05820252.1| cobalamin synthesis protein P47K [Brucella abortus NCTC 8038]
gi|376270796|ref|YP_005113841.1| cobalamin synthesis protein P47K [Brucella abortus A13334]
gi|82939446|emb|CAJ12412.1| ATP/GTP-binding site motif A (P-loop):Cobalamin synthesis
protein/P47K [Brucella melitensis biovar Abortus 2308]
gi|189021027|gb|ACD73748.1| Cobalamin synthesis protein/P47K [Brucella abortus S19]
gi|237787565|gb|EEP61781.1| cobalamin synthesis protein P47K [Brucella abortus str. 2308 A]
gi|260097702|gb|EEW81576.1| cobalamin synthesis protein P47K [Brucella abortus NCTC 8038]
gi|363401968|gb|AEW18937.1| cobalamin synthesis protein P47K [Brucella abortus A13334]
Length = 379
Score = 186 bits (473), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 172/317 (54%), Gaps = 42/317 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V
Sbjct: 71 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRAKTG 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL ++ ++
Sbjct: 130 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPEELAAVEATVR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHH-- 169
IN A + + S+ +D VL G +DL+R+ D HV C HH
Sbjct: 184 AINPHAIIHRTERASIPLDRVLDRGAFDLKRVLDNDPHFLDHDDPDHVCCPDCDHDHHHQ 243
Query: 170 ----------------------ESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDD 207
H+ H + +HD V SV++ + G +D +
Sbjct: 244 GHHHHGHDHHHHDHHDHDHVCGPDCDHDHDHDHASPIHDVTVKSVSLRT-GEIDPAKFFP 302
Query: 208 WLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIG 267
W++ + + +G ++ R+KGI++ +YV QGVH ++G +AW P+EK ++LVFIG
Sbjct: 303 WIQNITQTQGPNILRLKGIIAFKDDPDRYVVQGVHMIIEGDHQRAWKPEEKHESRLVFIG 362
Query: 268 RNLDETALRKGFKGCLA 284
R LD AL+ GF+ C A
Sbjct: 363 RELDPAALKAGFENCRA 379
>gi|399115650|emb|CCG18453.1| putative uncharacterized protein [Taylorella equigenitalis 14/56]
Length = 358
Score = 186 bits (472), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 170/304 (55%), Gaps = 29/304 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKK---KQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CC+VR DL LL L + Q +FD ++IETTGLA P P+ +TF ++ V+
Sbjct: 63 LNNGCICCSVRVDLENTLLDLKDRLESGQSKFDRVIIETTGLANPGPICQTFFLNDDVAA 122
Query: 59 YVKLDGVITLVDSKHAMQHL-NEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLT 117
+ +LD VIT+VD+KH M L NE+ EA QV +ADRI+++K DLV++ E L
Sbjct: 123 FYRLDAVITVVDAKHGMDTLTNEI-------EAQAQVGFADRILISKRDLVSDEEYEDLR 175
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERI---DSEV--HVDNSHCATHHHESA 172
R+ H+N A + +G VD++ +L V G++L I D E ++ H H
Sbjct: 176 HRLIHMNPRAEIMPVNFGEVDLNKILSVSGFNLNEILEIDPEFLKEEEHDHDHHDHVCDE 235
Query: 173 HGHHEGHHHNHMH------------DSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDL 220
H HHE + + A+ + SE + D ++D++L L++ G D+
Sbjct: 236 HCHHEHGDGHQHDHDHHHDHHHSHHNDAIKAFVYTSEKSFDPVKLDEFLSGLVQVYGPDM 295
Query: 221 YRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
YR KGI+ + G+ +++ QGVH L PG+ WG +K+ +K+VFIG+NL +G
Sbjct: 296 YRYKGIIYIKGAPVKFLLQGVHMVLGTNPGQPWGTAKKQ-SKIVFIGKNLPHDVFTEGLN 354
Query: 281 GCLA 284
CLA
Sbjct: 355 QCLA 358
>gi|261220797|ref|ZP_05935078.1| cobalamin synthesis protein P47K [Brucella ceti B1/94]
gi|261312959|ref|ZP_05952156.1| cobalamin synthesis protein P47K [Brucella pinnipedialis
M163/99/10]
gi|265995847|ref|ZP_06108404.1| cobalamin synthesis protein P47K [Brucella ceti M490/95/1]
gi|260919381|gb|EEX86034.1| cobalamin synthesis protein P47K [Brucella ceti B1/94]
gi|261301985|gb|EEY05482.1| cobalamin synthesis protein P47K [Brucella pinnipedialis
M163/99/10]
gi|262550144|gb|EEZ06305.1| cobalamin synthesis protein P47K [Brucella ceti M490/95/1]
Length = 381
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/319 (36%), Positives = 174/319 (54%), Gaps = 44/319 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V
Sbjct: 71 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRAKTG 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL ++ ++
Sbjct: 130 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPEELAAVEATVR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHHES 171
IN A + + S+ +D VL G +DL+R+ D HV C HH
Sbjct: 184 AINPHAIIHRTERASIPLDRVLDRGAFDLKRVLDNDPHFLDHDDPDHVCGPDCDHDHHHH 243
Query: 172 AHGHHEGHHH--------------------------NHMHDSAVSSVTIVSEGTLDLDEV 205
H HH HH + +HD V SV++ + G +D +
Sbjct: 244 GHHHHGHDHHHHDHHDHDHVCGPDCDHDHDHDHDHASPIHDVTVKSVSLRT-GEIDPAKF 302
Query: 206 DDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVF 265
W++ + + +G ++ R+KGI++ +YV QGVH ++G +AW P+EK ++LVF
Sbjct: 303 FPWIQNITQTQGPNILRLKGIIAFKDDPDRYVVQGVHMIIEGDHQRAWKPEEKHESRLVF 362
Query: 266 IGRNLDETALRKGFKGCLA 284
IGR LD AL+ GF+ C A
Sbjct: 363 IGRELDPAALKAGFENCRA 381
>gi|359796892|ref|ZP_09299484.1| CobW/HypB/UreG, nucleotide-binding domain-containing protein 5
[Achromobacter arsenitoxydans SY8]
gi|359365190|gb|EHK66895.1| CobW/HypB/UreG, nucleotide-binding domain-containing protein 5
[Achromobacter arsenitoxydans SY8]
Length = 378
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 171/319 (53%), Gaps = 45/319 (14%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCTVRGDL++ L L K++ GQ F+ +++ETTG+A P PV +TF D+ +++
Sbjct: 68 LSNGCVCCTVRGDLMRTLSDLRVKREAGQLNFERVILETTGMANPGPVCQTFFMDDDIAE 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
Y +LD V+T+VD+KH M L+E +P EA +QV +ADRI+++K DLV E + +L
Sbjct: 128 YYRLDAVVTVVDAKHGMSTLDE-QP-----EAQKQVGFADRILISKKDLVNEVDYEALRH 181
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHH--------- 169
R+ H+N AP+ +G VD+ ++ + G++L I + +D A H
Sbjct: 182 RLVHMNPRAPITAVNFGDVDLKSIIDISGFNLNSI---LDIDPEFLADEHPDAAHSHAHG 238
Query: 170 ------------------------ESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEV 205
E + HHH+ HD + + S D +
Sbjct: 239 HDHGHDHHGHDHDHDHDHDHDHDGECGAHCNHAHHHHPKHDDEIGAFVFRSNKPFDPARL 298
Query: 206 DDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVF 265
+++L +++ G DL R KGIL + G ++ +FQGVH + PGK W EK K+VF
Sbjct: 299 EEFLGGVVQVYGPDLMRYKGILYMKGINRRMLFQGVHMMMGAEPGKPWTAAEKPSTKMVF 358
Query: 266 IGRNLDETALRKGFKGCLA 284
IGR L + +G + CLA
Sbjct: 359 IGRKLPQEIFTRGLEQCLA 377
>gi|265985165|ref|ZP_06097900.1| cobalamin synthesis protein P47K [Brucella sp. 83/13]
gi|264663757|gb|EEZ34018.1| cobalamin synthesis protein P47K [Brucella sp. 83/13]
Length = 386
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/316 (36%), Positives = 173/316 (54%), Gaps = 43/316 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V
Sbjct: 71 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRAKTG 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL ++ ++
Sbjct: 130 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPEELAAVEATVR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHHES 171
IN A + + S+ +D VL G +DL+R+ D HV C HH
Sbjct: 184 AINPHAIIHRTERASIPLDRVLDRGAFDLKRVLDNDPHFLDHDDPDHVCGPDCDHDHHHG 243
Query: 172 AHGHHEGHHH-------------------------NHMHDSAVSSVTIVSEGTLDLDEVD 206
H H HHH + +HD V SV++ + G +D +
Sbjct: 244 HHHHGHDHHHHDHHDHDHVCGPDCDHDHDHDHDHASPIHDVTVKSVSLRT-GEIDPAKFF 302
Query: 207 DWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFI 266
W++ + + +G ++ R+KGI++ +YV QGVH ++G +AW P+EK ++LVFI
Sbjct: 303 PWIQNITQTQGPNILRLKGIIAFKDDPDRYVVQGVHMIIEGDHQRAWKPEEKHESRLVFI 362
Query: 267 GRNLDETALRKGFKGC 282
GR LD AL+ GF+ C
Sbjct: 363 GRELDPAALKAGFENC 378
>gi|163859115|ref|YP_001633413.1| hypothetical protein Bpet4794 [Bordetella petrii DSM 12804]
gi|163262843|emb|CAP45146.1| conserved hypothetical protein [Bordetella petrii]
Length = 368
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 168/309 (54%), Gaps = 35/309 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCTVRGDL++ L L AK++ GQ F+ +++ETTG+A P PV +TF D+ +++
Sbjct: 68 LSNGCVCCTVRGDLMRTLSDLRAKREAGQLNFERVILETTGMANPGPVCQTFFMDDEIAE 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
Y +LD V+T+VD+KH M L+ EA +QV +ADRI+++K DLV E + +L
Sbjct: 128 YYRLDAVVTVVDAKHGMATLD------AQEEAQKQVGFADRILVSKKDLVNEADYEALRA 181
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHH--------- 169
R+ IN AP+ +G D+ ++ + G++L I + +D A H
Sbjct: 182 RLVRINPRAPISPVNFGDADLKSIIDISGFNLNSI---LDIDPDFLADEHPDAAHSHAHG 238
Query: 170 ----ESAHGHHEGH----------HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEE 215
HEG HH+H HD + + S D ++++L +++
Sbjct: 239 HDHDHDHDHDHEGECGDHCHHEHHHHHHHHDDEIGAFVFRSNKPFDPARLEEFLGGVVQV 298
Query: 216 KGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETAL 275
G DL R KGIL + G ++ +FQGVH + PGK W EK K+VFIGR L +
Sbjct: 299 YGPDLMRYKGILYMKGINRRMLFQGVHMMMGAEPGKPWTAAEKPSTKMVFIGRKLPQEIF 358
Query: 276 RKGFKGCLA 284
+G + CLA
Sbjct: 359 TRGLEQCLA 367
>gi|159463106|ref|XP_001689783.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283771|gb|EDP09521.1| predicted protein [Chlamydomonas reinhardtii]
Length = 319
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 158/273 (57%), Gaps = 12/273 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQ-FDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
+ NGC+CC V+ D ++ L L ++ G+ FD+I+IET+GLA P P+ TD + V
Sbjct: 55 LTNGCMCCAVKSDFLQALESLLERPGGRRFDYILIETSGLANPGPIATALWTDAELESRV 114
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
LDGV+T+VD+ + + L+E +PR VNEA QVAYAD ++LNK+DLV E L I
Sbjct: 115 NLDGVVTVVDAVNIDRQLHEPRPRGAVNEAQLQVAYADIVLLNKLDLVDEEALIRSEADI 174
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
+ IN+ + VD+ +L GY R + + + E+
Sbjct: 175 RAINSGVNIVRTSRAVVDLGLILNRNGYRFSRASGDGASASPGLGANAPEAT-------- 226
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLI---EEKGEDLYRMKGILSVSGSEQQYV 237
+H+HD++VS++++ E +DL W++ L+ E + +++YRMKG+LSV+GS++++
Sbjct: 227 PDHVHDNSVSTISLRCEHPVDLGRFKSWVDHLLWDRESRPDEIYRMKGLLSVTGSDKKHS 286
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNL 270
Q V+ + PG AW E R++++V IGRNL
Sbjct: 287 LQAVYELYEIMPGPAWQAGEARVSRVVLIGRNL 319
>gi|449523868|ref|XP_004168945.1| PREDICTED: COBW domain-containing protein 1-like [Cucumis sativus]
Length = 367
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 157/285 (55%), Gaps = 20/285 (7%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CCTV+ LV+ L QL ++K+ + DHI++ETTGLA PAP+ D+ + +KLD
Sbjct: 93 NGCICCTVKHSLVQALEQLVQRKE-RLDHILLETTGLANPAPLASVLWLDDQLESSIKLD 151
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVT----ETELGSLTER 119
+IT+VD+K+ LNE + EA Q+ +AD IILNK+DLV+ + L L
Sbjct: 152 SIITVVDAKNLHFQLNEHRSSSSFPEAFHQIVFADTIILNKVDLVSSDRGDGALEDLEYE 211
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGH 179
I++IN++A + + VD+ +L Y+ T H E+
Sbjct: 212 IRNINSLAKIIHSVRCQVDLSLILDCNSYNAAN-------------TAHLEALLKESCSL 258
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK--GEDLYRMKGILSVSGSEQQYV 237
+HD+ V ++ I +DLD+V WLE ++ EK G D+YR KG+LS+ S+Q +
Sbjct: 259 STQDLHDTGVRTLCISEHDKVDLDKVHSWLEEILWEKKGGMDVYRCKGVLSIKNSDQLHT 318
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
Q V + P + W E + NK+VFIGRNL+E L K F+ C
Sbjct: 319 LQAVRELYEIVPTRQWNNGESQTNKIVFIGRNLNEDVLSKTFREC 363
>gi|33594011|ref|NP_881655.1| hypothetical protein BP3084 [Bordetella pertussis Tohama I]
gi|384205314|ref|YP_005591053.1| hypothetical protein BPTD_3048 [Bordetella pertussis CS]
gi|33564085|emb|CAE43353.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
gi|332383428|gb|AEE68275.1| hypothetical protein BPTD_3048 [Bordetella pertussis CS]
Length = 371
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 173/311 (55%), Gaps = 38/311 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCTVRGDL++ L L A+++ G+ F+ ++IETTG+A P PV +TF D+ +++
Sbjct: 68 LSNGCVCCTVRGDLMRTLSDLRARREAGELSFERVIIETTGMANPGPVCQTFFMDDDIAE 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
Y +LD V+T+VD+KH M L+ + EA +QV +ADRI+++K DLV + + +L +
Sbjct: 128 YYRLDAVVTVVDAKHGMATLDAQE------EAQKQVGFADRILVSKKDLVNDVDYAALHQ 181
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHE-------- 170
R+ IN AP+ +G D+ ++ + G++L I + +D + A H +
Sbjct: 182 RLVRINPRAPITPVHFGEADLKSIIDISGFNLNSI---LDIDPAFLADEHPDAAHDHHDH 238
Query: 171 ------------------SAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERL 212
AH +H HHH+ HD + + S D ++++L +
Sbjct: 239 DHGHGHDHDHDHDHEGECGAHCNHHHHHHHAHHDDEIGAFVFRSNKPFDPARLEEFLGGV 298
Query: 213 IEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDE 272
++ G DL R KGIL + G ++ +FQGVH + PGKAW EK K+VFIGR L +
Sbjct: 299 VQVYGPDLLRYKGILYMKGINRRMLFQGVHMMMGAEPGKAWTAAEKPSTKMVFIGRKLPQ 358
Query: 273 TALRKGFKGCL 283
+G + CL
Sbjct: 359 EIFTRGLEQCL 369
>gi|290994526|ref|XP_002679883.1| predicted protein [Naegleria gruberi]
gi|284093501|gb|EFC47139.1| predicted protein [Naegleria gruberi]
Length = 375
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 175/293 (59%), Gaps = 17/293 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
++NGCLCCT+RGDL+ L +L++KK +FD+I IETTGLA P P+++TF DE V
Sbjct: 87 LSNGCLCCTLRGDLIGALTKLSQKKD-KFDYICIETTGLALPGPIVQTFYLDEQVRNEYY 145
Query: 62 LDGVITLVDSKHAMQ-----------HLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTE 110
LDG++T+VDSKH +Q E + NEA +QVA+ADRII+NK+DL+ E
Sbjct: 146 LDGIVTVVDSKHIIQHLHHHHHEKKHGEEEEEEEEEENEAEDQVAFADRIIVNKVDLIDE 205
Query: 111 TELGSLTERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHE 170
+ ++I+ IN ++P+ + +D+ F+L + +D++R+ +++D +
Sbjct: 206 DTKKKVLKKIRKINGLSPICETSHSKIDLSFILNIRAFDIDRV---LNMDPNLLKEMDEH 262
Query: 171 SAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVS 230
H+ HH + HD+ V+S IV G +D ++ +DWL L+ E+G D+YR KG L+V
Sbjct: 263 QHEEEHDHHHKHDHHDAEVTSYAIVKPGVVDKEKFEDWLLDLLTERGLDIYRTKGFLNV- 321
Query: 231 GSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
G + V Q VHS LD W ++ NKLVFIG+ LD L +GF CL
Sbjct: 322 GEAKPLVVQAVHSLLDMRFFGEWKNNDTT-NKLVFIGKYLDHEELNEGFNACL 373
>gi|395788587|ref|ZP_10468140.1| hypothetical protein ME7_01475 [Bartonella birtlesii LL-WM9]
gi|395407696|gb|EJF74337.1| hypothetical protein ME7_01475 [Bartonella birtlesii LL-WM9]
Length = 342
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/287 (37%), Positives = 171/287 (59%), Gaps = 18/287 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L ++ +FD I++ETTGLA P PV +TF D+ V +
Sbjct: 67 MNNGCVCCTVRGDLIRILESLMQRSH-RFDAIILETTGLADPIPVAQTFFMDDTVHEKTA 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI +VD+KH L + + EA +Q+A++D I+LNKIDLV+ E + I
Sbjct: 126 LDSVIAVVDAKHFPLQLKKSR------EAEDQIAFSDIILLNKIDLVSAEERAHVQSLIF 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHES------AHGH 175
IN A + + ++ ++ +L G +DL+R ++ H H H H
Sbjct: 180 AINPRAILYATERANIPLNKLLDRGSFDLQRTLE----NDPHFLNHQHSDHVCGPDCSHH 235
Query: 176 HEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQ 235
H HH + +HD +SS+++ + L ++ W++++ +++G D+ R+KGI++ G + +
Sbjct: 236 HVHHHTSTIHDITISSISLKTSA-LHPEKFFSWIQQVTQKQGPDILRLKGIIAFQGDDDR 294
Query: 236 YVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
YV QG+H L+G + W DEKR ++LVFIGRNLD L+ GF+ C
Sbjct: 295 YVVQGIHMILEGQHQRPWREDEKRESRLVFIGRNLDPEKLKIGFENC 341
>gi|161621035|ref|YP_001594921.1| cobalamin synthesis protein P47K [Brucella canis ATCC 23365]
gi|376277503|ref|YP_005153564.1| cobalamin synthesis protein P47K [Brucella canis HSK A52141]
gi|161337846|gb|ABX64150.1| cobalamin synthesis protein P47K [Brucella canis ATCC 23365]
gi|363405877|gb|AEW16171.1| cobalamin synthesis protein P47K [Brucella canis HSK A52141]
Length = 376
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/314 (36%), Positives = 174/314 (55%), Gaps = 39/314 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V
Sbjct: 71 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRAKTG 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL ++ ++
Sbjct: 130 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPEELAAVEATVR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHHES 171
IN A + + S+ ++ VL G +DL+R+ D HV C HH
Sbjct: 184 AINPHAIIHHTERASIPLNRVLDRGAFDLKRVLDNDPHFLDHDDPDHVCGPDCDHDHHHH 243
Query: 172 AHGHHEGHHH---------------------NHMHDSAVSSVTIVSEGTLDLDEVDDWLE 210
H HH HH + +HD V SV++ + G +D + W++
Sbjct: 244 GHDHHHHDHHDHDHVCGPDCDHDHDHDHDHASPIHDVTVKSVSLRT-GEIDPAKFFPWIQ 302
Query: 211 RLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNL 270
+ + +G ++ R+KGI++ +YV QGVH ++G +AW P+EK ++LVFIGR L
Sbjct: 303 NITQTQGPNILRLKGIIAFKDDPDRYVVQGVHMIIEGDHQRAWKPEEKHESRLVFIGREL 362
Query: 271 DETALRKGFKGCLA 284
D AL+ GF+ C A
Sbjct: 363 DPAALKAGFENCRA 376
>gi|160896903|ref|YP_001562485.1| cobalamin synthesis protein P47K [Delftia acidovorans SPH-1]
gi|160362487|gb|ABX34100.1| cobalamin synthesis protein P47K [Delftia acidovorans SPH-1]
Length = 384
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 173/319 (54%), Gaps = 46/319 (14%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQG--QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DL + L L AK+++G +FD IVIETTGLA P PV +TF D+ +++
Sbjct: 74 MSNGCICCTIREDLRETLQLLAAKRRKGLVEFDRIVIETTGLADPGPVAQTFFMDDEIAE 133
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+D ++TLVD+KHA Q L++ + EA QV +AD++ L+K DLV+E E +L
Sbjct: 134 TYLIDSILTLVDAKHANQQLDDRQ------EARRQVGFADQLFLSKTDLVSEDEKNALIH 187
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLER---IDSEV---------------HVD 160
R+KH+N AP++ +G V ++ V + G++L ID + H
Sbjct: 188 RLKHMNPRAPIRAVHFGEVSLNEVFDLRGFNLNAKLDIDPDFLKEDDHDHGHDHGHKHEH 247
Query: 161 NSHCATHHHESAHGHHEGHHHNHMHD----------------SAVSSVTIVSEGTLDLDE 204
+ HC H+ H H E H+H HD V S ++ D
Sbjct: 248 DEHCG---HDHGHEHDENCGHDHAHDHEHGEHCKHPHHHHHDDDVKSFVYRADRAFDPAR 304
Query: 205 VDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLV 264
++D+L ++ G + R KG+L++ G+E++ +FQGVH + G W EKR +K+V
Sbjct: 305 LEDFLGAIVNIYGPRMLRYKGVLNMQGTERKVIFQGVHQLMGSDLGPQWAEGEKRQSKMV 364
Query: 265 FIGRNLDETALRKGFKGCL 283
FIG +L + +G + CL
Sbjct: 365 FIGIDLPQDIFLQGLEQCL 383
>gi|389870814|ref|YP_006378233.1| CobW/HypB/UreG, nucleotide-binding domain-containing protein 5
[Advenella kashmirensis WT001]
gi|388536063|gb|AFK61251.1| CobW/HypB/UreG, nucleotide-binding domain-containing protein 5
[Advenella kashmirensis WT001]
Length = 375
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/314 (35%), Positives = 170/314 (54%), Gaps = 40/314 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA---KKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCTVRGDL+ L L +K + +F+ +VIETTG+A P PV +TF D+ V+
Sbjct: 69 LSNGCVCCTVRGDLLNTLNDLKVRHQKGELKFERVVIETTGVANPGPVCQTFFMDDSVAA 128
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+ +LD VIT+VD+KH M+ L+ +P EA +QV +ADRI+++K DLVT+ E +L
Sbjct: 129 FYRLDAVITVVDAKHGMETLD-TQP-----EAQKQVGFADRILVSKKDLVTDQEYSALRH 182
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHH---------- 168
R+ H+N A + +G +D++ VL + G++L I + +D H
Sbjct: 183 RLLHMNPRAEIMPVHFGEIDINKVLDISGFNLNTI---LDIDPEFLKEEHPDAAHDHDHE 239
Query: 169 ------------------HESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLE 210
H HH HH+ HD + + SE + ++++L
Sbjct: 240 HDHDHGHDHKHDHGHAHGEHHDHDHHHHDHHHAHHDDEIGAFVFKSEKPFIPERLEEFLS 299
Query: 211 RLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNL 270
+++ G DLYR KGIL + G Q+ +FQGVH + PGK WGP EK N +VFIGR L
Sbjct: 300 GVVQVFGPDLYRYKGILYMKGMRQRMIFQGVHMLMGAEPGKPWGPKEKPSNTMVFIGRKL 359
Query: 271 DETALRKGFKGCLA 284
+ + G CL
Sbjct: 360 PKDVILNGLNQCLV 373
>gi|333916669|ref|YP_004490401.1| cobalamin synthesis protein P47K [Delftia sp. Cs1-4]
gi|333746869|gb|AEF92046.1| cobalamin synthesis protein P47K [Delftia sp. Cs1-4]
Length = 371
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 173/319 (54%), Gaps = 46/319 (14%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQG--QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DL + L L AK+++G +FD IVIETTGLA P PV +TF D+ +++
Sbjct: 61 MSNGCICCTIREDLRETLQLLAAKRRKGLVEFDRIVIETTGLADPGPVAQTFFMDDEIAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+D ++TLVD+KHA Q L++ + EA QV +AD++ L+K DLV+E E +L
Sbjct: 121 TYLIDSILTLVDAKHANQQLDDRQ------EARRQVGFADQLFLSKTDLVSEDEKNALIH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLER---IDSEV---------------HVD 160
R+KH+N AP++ +G V ++ V + G++L ID + H
Sbjct: 175 RLKHMNPRAPIRAVHFGEVPLNEVFDLRGFNLNAKLDIDPDFLKEDDHDHGHDHGHKHEH 234
Query: 161 NSHCATHHHESAHGHHEGHHHNHMHD----------------SAVSSVTIVSEGTLDLDE 204
+ HC H+ H H E H+H HD V S ++ D
Sbjct: 235 DEHCG---HDHGHEHDENCGHDHAHDHEHGEHCKHPHHHHHDDDVKSFVYRADRAFDPAR 291
Query: 205 VDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLV 264
++D+L ++ G + R KG+L++ G+E++ +FQGVH + G W EKR +K+V
Sbjct: 292 LEDFLGAIVNIYGPRMLRYKGVLNMQGTERKVIFQGVHQLMGSDLGPQWAEGEKRQSKMV 351
Query: 265 FIGRNLDETALRKGFKGCL 283
FIG +L + +G + CL
Sbjct: 352 FIGIDLPQDIFLQGLEQCL 370
>gi|163845102|ref|YP_001622757.1| hypothetical protein BSUIS_B0982 [Brucella suis ATCC 23445]
gi|163675825|gb|ABY39935.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 379
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 172/317 (54%), Gaps = 42/317 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V
Sbjct: 71 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRAKTG 129
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL ++ ++
Sbjct: 130 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPEELAAVEATVR 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHH-- 169
IN A + + S+ ++ VL G +DL+R+ D HV C HH
Sbjct: 184 AINPHAIIHHTERASIPLNRVLDRGAFDLKRVLDNDPHFLDHDDPDHVCGPDCDHDHHHH 243
Query: 170 ----------------------ESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDD 207
H+ H + +HD V SV++ + G +D +
Sbjct: 244 GHHHHGHDHHHHDHHDHDHVCGPDCDHDHDHDHASPIHDVTVKSVSLRT-GEIDPAKFFP 302
Query: 208 WLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIG 267
W++ + + +G ++ R+KGI++ +YV QGVH ++G +AW P+EK ++LVFIG
Sbjct: 303 WIQNITQTQGPNILRLKGIIAFKDDPDRYVVQGVHMIIEGDHQRAWKPEEKHESRLVFIG 362
Query: 268 RNLDETALRKGFKGCLA 284
R LD AL+ GF+ C A
Sbjct: 363 RELDPAALKAGFENCRA 379
>gi|337264870|ref|YP_004608925.1| cobalamin synthesis protein P47K [Mesorhizobium opportunistum
WSM2075]
gi|336025180|gb|AEH84831.1| cobalamin synthesis protein P47K [Mesorhizobium opportunistum
WSM2075]
Length = 350
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/295 (37%), Positives = 169/295 (57%), Gaps = 20/295 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V K
Sbjct: 64 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRSKTK 122
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD ++LNK DLVT EL + I+
Sbjct: 123 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVVLNKTDLVTPEELAKVEATIR 176
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHV-----------DNSHCATHHH 169
IN A + V + VL G +DL + ++++ H + HH
Sbjct: 177 AINPAARIHRTTRAGVALSEVLDRGAFDLSKALENDPHFLEAHDDHDHHHHDHDGHDHHD 236
Query: 170 ESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSV 229
H HH H + +HD V SV++ G +D + W+E++ + +G ++ R+KGI+++
Sbjct: 237 HDRHDHHHHAHPSDIHDVTVQSVSLRG-GEMDPKKFFPWIEKITQMEGPNILRLKGIIAL 295
Query: 230 SGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+++YV QGVH ++G +AW EK ++LVFIGR LD L+K F C A
Sbjct: 296 KSDDERYVIQGVHMIIEGDHQRAWKDGEKHESRLVFIGRELDAERLKKSFDACQA 350
>gi|430004709|emb|CCF20508.1| Putative cobalamin synthesis protein/P47K family protein [Rhizobium
sp.]
Length = 373
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/313 (35%), Positives = 170/313 (54%), Gaps = 38/313 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 66 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL + + ++
Sbjct: 125 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVVINKTDLVTPEELAQIEDVVR 178
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHHES 171
IN A + VD+ VL G ++LER E HV C H
Sbjct: 179 AINPGARIYKTSRSGVDLAKVLNQGAFNLERALENDPQFLEHGHEDHVCGPDCDHDHGHH 238
Query: 172 AHGHHEGHHH--------------------NHMHDSAVSSVTIVSEGTLDLDEVDDWLER 211
H H HH + +HD V S+++ G ++ D W+++
Sbjct: 239 HHDHDHHHHDHDHHHHHDHDHGHDHHHHAPSPIHDVTVKSISLRG-GEMNPDRFFPWIQK 297
Query: 212 LIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLD 271
+ + G ++ R+KGI++ G E++YV QGVH ++G + W DEKR ++LVFIGR+LD
Sbjct: 298 VTQTDGPNILRLKGIIAFKGDEERYVVQGVHMIVEGDHQRPWKEDEKRESRLVFIGRDLD 357
Query: 272 ETALRKGFKGCLA 284
+ K FK C A
Sbjct: 358 VEKIEKSFKACEA 370
>gi|395780839|ref|ZP_10461286.1| hypothetical protein MCW_01373 [Bartonella washoensis 085-0475]
gi|395416950|gb|EJF83304.1| hypothetical protein MCW_01373 [Bartonella washoensis 085-0475]
Length = 340
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/283 (38%), Positives = 172/283 (60%), Gaps = 12/283 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L ++ +FD I+IETTGLA P PV +TF D+ V +
Sbjct: 67 MNNGCVCCTVRGDLIRILESLMQRSH-RFDAIIIETTGLADPIPVAQTFFMDDTVHEKTA 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI +VD+KH L + + E EQ+A++D I+LNK+DLV+ E I
Sbjct: 126 LDSVIAIVDAKHLPSQLKKSR------EVEEQIAFSDIILLNKMDLVSAEERAHAQSLIL 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVH-VDNSHCATHHHESAHGHHEGH 179
IN A + + + +D +L G +DL+ +D++ H +D+ H + H H+ H
Sbjct: 180 AINPRAIIYATERADISLDKLLNRGSFDLKHALDNDPHFLDHQH--SDHVCGPACDHDHH 237
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
H + HD+ ++SV++ + G L ++ W++++ +++G D+ R+KGI++ G +YV Q
Sbjct: 238 HTSTSHDTTITSVSLKT-GALKPEKFFSWIQQVTQQQGPDILRLKGIIAFQGDNDRYVIQ 296
Query: 240 GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
G+H L+G + W DEKR ++LVFIGR LD L+ GF+ C
Sbjct: 297 GIHMILEGQHQRPWHEDEKRESRLVFIGRTLDAEKLKIGFENC 339
>gi|33594897|ref|NP_882540.1| hypothetical protein BPP0179 [Bordetella parapertussis 12822]
gi|33564973|emb|CAE39920.1| conserved hypothetical protein [Bordetella parapertussis]
Length = 369
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 173/309 (55%), Gaps = 36/309 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCTVRGDL++ L L A+++ G+ F+ ++IETTG+A P PV +TF D+ +++
Sbjct: 68 LSNGCVCCTVRGDLMRTLSDLRARREAGELSFERVIIETTGMANPGPVCQTFFMDDDIAE 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
Y +LD V+T+VD+KH M L+ +EA +QV +ADRI+++K DLV + + +L +
Sbjct: 128 YYRLDAVVTVVDAKHGMATLD------AQDEAQKQVGFADRILVSKKDLVNDVDYAALHQ 181
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHE-------- 170
R+ IN AP+ +G D+ ++ + G++L I + +D + A H +
Sbjct: 182 RLVRINPRAPITPVHFGEADLKSIIDISGFNLNSI---LDIDPAFLADEHPDAAHDHHDH 238
Query: 171 ----------------SAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIE 214
AH +H HHH+ HD + + S D ++++L +++
Sbjct: 239 DHGHSHEHDHDHEGECGAHCNHHHHHHHAHHDDEIGAFVFRSNKPFDPARLEEFLGGVVQ 298
Query: 215 EKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETA 274
G DL R KGIL + G ++ +FQGVH + PGKAW EK K+VFIGR L +
Sbjct: 299 VYGPDLLRYKGILYMKGINRRMLFQGVHMMMGAEPGKAWTAAEKPSTKMVFIGRKLPQEI 358
Query: 275 LRKGFKGCL 283
+G + CL
Sbjct: 359 FTRGLEQCL 367
>gi|332286564|ref|YP_004418475.1| hypothetical protein PT7_3311 [Pusillimonas sp. T7-7]
gi|330430517|gb|AEC21851.1| hypothetical protein PT7_3311 [Pusillimonas sp. T7-7]
Length = 368
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/309 (35%), Positives = 171/309 (55%), Gaps = 36/309 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQ-GQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCTVRGDL++ L L K Q GQ F+ I+IETTG+A P PV +TF D+ ++
Sbjct: 68 LSNGCVCCTVRGDLMRTLNDLRIKHQAGQLNFERIIIETTGMANPGPVCQTFFMDDEIAD 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
Y +LD VIT+VD+KH M+ L++ + EA +QV +ADR++++K DLV + + +L
Sbjct: 128 YYRLDAVITVVDAKHGMETLDKQE------EAQKQVGFADRLLISKKDLVNDVDYQALRA 181
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAH----- 173
R+ HIN A + +G D+ +L + G++L I + +D A H ++AH
Sbjct: 182 RLVHINPRASITPVNFGETDLTTLLDISGFNLNTI---LDIDPEFLADEHPDAAHDHDHG 238
Query: 174 -------------------GHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIE 214
GH HH+ HD + + S D + ++++L +++
Sbjct: 239 HDHGHGHDHDHEGECGPACGHQHHDHHHAHHDDQIGAFVFRSNKAFDPERLEEFLGGIVQ 298
Query: 215 EKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETA 274
G DL R KGIL + G ++ +FQGVH + PGK W +EK K+VFIGR L +
Sbjct: 299 VYGPDLLRYKGILYLKGINRRMLFQGVHMMMGAEPGKPWLANEKPNTKMVFIGRKLPQDI 358
Query: 275 LRKGFKGCL 283
+G + CL
Sbjct: 359 FTQGLENCL 367
>gi|319764386|ref|YP_004128323.1| cobalamin synthesis protein p47k [Alicycliphilus denitrificans BC]
gi|330826605|ref|YP_004389908.1| cobalamin synthesis protein P47K [Alicycliphilus denitrificans
K601]
gi|317118947|gb|ADV01436.1| cobalamin synthesis protein P47K [Alicycliphilus denitrificans BC]
gi|329311977|gb|AEB86392.1| cobalamin synthesis protein P47K [Alicycliphilus denitrificans
K601]
Length = 356
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/308 (36%), Positives = 174/308 (56%), Gaps = 40/308 (12%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQG--QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DL + L L AK+++G +FD +VIETTGLA P PV +TF D+ +++
Sbjct: 61 MSNGCICCTIREDLRETLQLLAAKRRKGLVEFDRVVIETTGLADPGPVAQTFFMDDEIAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+D +ITLVD+KHA Q L++ + EA QV +AD+I L+K DLV+E E L
Sbjct: 121 TYLIDSIITLVDAKHAQQQLDDRQ------EARRQVGFADQIFLSKTDLVSEDEKNDLIH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+KH+N AP++ +G V + VL + G++L ++ + +D E AHGH G
Sbjct: 175 RLKHMNPRAPIRAVHFGEVPLSEVLDLRGFNL---NARLDIDPDFL---KEEDAHGH--G 226
Query: 179 HHHN-----------------------HMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEE 215
H H+ H HD V S ++ D +++D+L ++
Sbjct: 227 HVHDEHCGHGHHDHDHEHGAHCNHPHHHHHDDDVKSFVYRADRPFDPAKLEDFLGAIVNI 286
Query: 216 KGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETAL 275
G + R KG+L + G++++ +FQGVH + G WG E+R +K+VFIG +L + L
Sbjct: 287 YGPRMLRYKGVLHMKGTDRKVIFQGVHQLMGSDLGPQWGESEQRQSKMVFIGIDLPQDIL 346
Query: 276 RKGFKGCL 283
+G + CL
Sbjct: 347 LQGLEQCL 354
>gi|418298106|ref|ZP_12909945.1| cobalamin synthesis protein [Agrobacterium tumefaciens CCNWGS0286]
gi|355536701|gb|EHH05968.1| cobalamin synthesis protein [Agrobacterium tumefaciens CCNWGS0286]
Length = 368
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 168/313 (53%), Gaps = 42/313 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 66 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLV+ E+ + + ++
Sbjct: 125 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVVVNKTDLVSPEEVARIEDIVR 178
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHES---------- 171
IN A + VD+ VL G ++LER ++ H H HE
Sbjct: 179 AINPSARIYKTTRSGVDLARVLDQGAFNLER----ALENDPHFLEHGHEDHACGPDCDHH 234
Query: 172 --------------------AHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLER 211
H HH + +HD V SV++ G ++ + W+++
Sbjct: 235 HHDHDHHHHDHDHGHHDHDHGHDHHHHGAASPIHDVTVQSVSLRG-GEMNPERFFPWIQK 293
Query: 212 LIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLD 271
+ + G ++ R+KGI++ G ++YV QGVH ++G + W DEKR ++LVFIGR LD
Sbjct: 294 VTQTDGPNILRLKGIIAFKGDAERYVVQGVHMIIEGDHQRPWKEDEKRESRLVFIGRELD 353
Query: 272 ETALRKGFKGCLA 284
L K F CLA
Sbjct: 354 REKLEKSFNACLA 366
>gi|117925594|ref|YP_866211.1| cobalamin synthesis protein, P47K [Magnetococcus marinus MC-1]
gi|117609350|gb|ABK44805.1| cobalamin synthesis protein, P47K [Magnetococcus marinus MC-1]
Length = 329
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 152/281 (54%), Gaps = 20/281 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
++NGCLCC++RGDL+ L +L + + GQ DHI+IETTGLA P P+ +TF + + + +
Sbjct: 60 LSNGCLCCSMRGDLLNTLQRL-QPRTGQIDHILIETTGLATPGPIAQTFLHEPFLKTHYR 118
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG ITL D+ H Q L + E QVA+AD +++NKIDLV + + ++
Sbjct: 119 LDGFITLCDALHLPQQLQRSR------ECQTQVAFADLLLINKIDLVADPS--AALAALR 170
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
N AP L + + +L +GG+ R E+H HG +
Sbjct: 171 PFNNHAPYLLVEQAQAPLAKLLDLGGFQPHR--QEIHPQQPPSTDTTPLLFHGQPQ---- 224
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
V +V + EG +D W+ RL+ +G+DL RMKGIL + G Q++FQGV
Sbjct: 225 ----HGPVRAVALTLEGAIDAPLFIRWITRLLALQGDDLLRMKGILHIHGQATQHIFQGV 280
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
H ++G G WG + +I+++V IG +LDE LR+ F C
Sbjct: 281 HHVIEGREGAVWG-TQPKISRMVLIGYHLDEAQLRQAFMEC 320
>gi|293602496|ref|ZP_06684942.1| cobalamin synthesis CobW/P47K family protein [Achromobacter
piechaudii ATCC 43553]
gi|292819258|gb|EFF78293.1| cobalamin synthesis CobW/P47K family protein [Achromobacter
piechaudii ATCC 43553]
Length = 377
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 173/318 (54%), Gaps = 44/318 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCTVRGDL++ L +L AK++ G+ F+ +++ETTG+A P PV +TF D+ +++
Sbjct: 68 LSNGCVCCTVRGDLMRTLSELRAKREAGELTFERVILETTGMANPGPVCQTFFMDDDIAE 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
Y +LD V+T+VD+KH M L+ +P EA +QV +ADRI+++K DLV E + +L
Sbjct: 128 YYRLDAVVTVVDAKHGMSTLD-AQP-----EAQKQVGFADRILISKRDLVNEVDYEALRH 181
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHES------- 171
R+ H+N AP+ +G VD+ ++ + G++L I + +D A H ++
Sbjct: 182 RLVHMNPRAPITPVNFGEVDLKSIIDISGFNLNSI---LDIDPEFLADEHPDAAHDHAHD 238
Query: 172 -------------------------AHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVD 206
+ HHH+ HD + + S D ++
Sbjct: 239 HGHDHGHGHGHDHGHDHDHDHDGDCGAHCNHAHHHHPKHDDEIGAFVFRSNKPFDPARLE 298
Query: 207 DWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFI 266
++L +++ G DL R KGIL + G ++ +FQGVH + PGK W EK K+VFI
Sbjct: 299 EFLGGVVQVYGPDLMRYKGILYMKGINRRMLFQGVHMMMGAEPGKPWTAAEKPSTKMVFI 358
Query: 267 GRNLDETALRKGFKGCLA 284
GR L + +G + CLA
Sbjct: 359 GRKLPQEIFTRGLEQCLA 376
>gi|452126647|ref|ZP_21939230.1| hypothetical protein F783_14599 [Bordetella holmesii F627]
gi|452130022|ref|ZP_21942595.1| hypothetical protein H558_14451 [Bordetella holmesii H558]
gi|451921742|gb|EMD71887.1| hypothetical protein F783_14599 [Bordetella holmesii F627]
gi|451922882|gb|EMD73026.1| hypothetical protein H558_14451 [Bordetella holmesii H558]
Length = 369
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 174/309 (56%), Gaps = 36/309 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCTVRGDL++ L +L K++ GQ F+ ++IETTG+A P PV +TF D+ +++
Sbjct: 68 LSNGCVCCTVRGDLMRTLNELRVKREAGQLTFERVIIETTGMANPGPVCQTFFMDDDIAE 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
Y +LD V+T+VD+KH M L+ +P EA +QV +ADRI+++K DLV + + +L
Sbjct: 128 YYRLDAVVTVVDAKHGMATLD-AQP-----EAQKQVGFADRILVSKRDLVNDADYEALRA 181
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHES------- 171
R+ IN AP+ +G V++ ++ + G++L I + +D A H ++
Sbjct: 182 RLLRINPRAPITPVHFGEVELKSIIDISGFNLNSI---LDIDPDFLADEHPDAKHDHDHH 238
Query: 172 -----------------AHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIE 214
AH +H HHH+H HD + + S D ++++L +++
Sbjct: 239 DHGHGHDHDHDHDGDCGAHCNHAHHHHHHQHDDKIGAFVFRSNKPFDPARLEEFLGGVVQ 298
Query: 215 EKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETA 274
G DL R KGIL + G ++ +FQGVH + PGK W EK K+VFIGR L +
Sbjct: 299 VYGPDLMRYKGILYMKGINRRMLFQGVHMMMGAEPGKPWTAAEKPSTKMVFIGRKLPQEI 358
Query: 275 LRKGFKGCL 283
+G + CL
Sbjct: 359 FTRGLEQCL 367
>gi|427812433|ref|ZP_18979497.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|410563433|emb|CCN20967.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
Length = 369
Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 171/309 (55%), Gaps = 36/309 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCTVRGDL++ L L A+++ G+ F+ ++IETTG+A P PV +TF D+ +++
Sbjct: 68 LSNGCVCCTVRGDLMRTLSDLRARREAGELSFERVIIETTGMANPGPVCQTFFMDDDIAE 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
Y +LD V+T+VD+KH M L+ +EA +QV +ADRI+++K DLV + + +L +
Sbjct: 128 YYRLDAVVTVVDAKHGMATLD------AQDEAQKQVGFADRILVSKKDLVNDVDYAALHQ 181
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+ +G D+ ++ + G++L I + +D + A H ++AH HH+
Sbjct: 182 RLVRINPRAPITPVHFGEADLKSIIDISGFNLNSI---LDIDPAFLADEHPDAAHDHHDH 238
Query: 179 HHHNHMHDSA------------------------VSSVTIVSEGTLDLDEVDDWLERLIE 214
H + + + S D ++++L +++
Sbjct: 239 DHGHGHEHDHDHEGECGAHCNHHHHHHHAHHNDEIGAFVFRSNKPFDPARLEEFLGGVVQ 298
Query: 215 EKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETA 274
G DL R KGIL + G ++ +FQGVH + PGKAW EK K+VFIGR L +
Sbjct: 299 VYGPDLLRYKGILYMKGINRRMLFQGVHMMMGAEPGKAWTAAEKPSTKMVFIGRKLPQEI 358
Query: 275 LRKGFKGCL 283
+G + CL
Sbjct: 359 FTRGLEQCL 367
>gi|134282160|ref|ZP_01768866.1| cobalamin synthesis protein, P47K [Burkholderia pseudomallei 305]
gi|167907153|ref|ZP_02494358.1| hypothetical protein BpseN_33285 [Burkholderia pseudomallei NCTC
13177]
gi|134246689|gb|EBA46777.1| cobalamin synthesis protein, P47K [Burkholderia pseudomallei 305]
Length = 332
Score = 183 bits (464), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 161/286 (56%), Gaps = 26/286 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCTVRGDL+++L +L KKQ FD ++IETTGLA PAPV +TF D+ +SQ
Sbjct: 61 MNNGCICCTVRGDLIRILGELHAKKQAGSLSFDRVIIETTGLADPAPVAQTFFVDDDISQ 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD V+T+VD+KHA Q L+E +EA EQV +ADRI++ K D+ ++ +L +
Sbjct: 121 RYLLDAVVTMVDAKHAAQQLDEH------HEAQEQVGFADRILITKTDVAEAQDVAALRK 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ +N A + A++G + +L + G++L+ I + ++ HE
Sbjct: 175 RLVRMNPRAKIGEARHGQAAVSDLLDIRGFNLDAI---LEIEPDFLIDVDHEHD------ 225
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
V+S + LDL ++D+L +++ G L R KG+L + G +++ V
Sbjct: 226 --------DDVTSFVFREDRPLDLQRIEDFLGDILQVYGPQLMRYKGVLQIRGVDRRVVL 277
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QGVH + G W E R +KLVFIGR+L L KG C+A
Sbjct: 278 QGVHMLMGSDFGSPWKRGEARSSKLVFIGRDLPVDVLTKGLSACIA 323
>gi|388495078|gb|AFK35605.1| unknown [Lotus japonicus]
Length = 390
Score = 183 bits (464), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 158/286 (55%), Gaps = 19/286 (6%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CCTV+ LV+ L QL ++K+ + DHI++ETTGLA PAP+ DE + VKLD
Sbjct: 118 NGCICCTVKHSLVQALEQLVQRKE-RLDHILLETTGLANPAPLASVLWLDEQLESDVKLD 176
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLT---ERI 120
++T+VD+K+ +++ + EA Q+A+AD IILNK+DLV+ G+L E I
Sbjct: 177 SIVTVVDAKNVRLQIDQHRRSSSYPEAYFQIAFADIIILNKVDLVSAEGSGALKELEEEI 236
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
+IN++ + + VD+ +L YD R H T ES
Sbjct: 237 HNINSLVEIIHSVKCQVDLSKILNRHAYDTARA--------PHLETLLEESC-----SLS 283
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDL--YRMKGILSVSGSEQQYVF 238
+HDS V ++ I + T+D+D+ WLE ++ EK D+ YR KG+LSV S+Q +
Sbjct: 284 TKKLHDSGVRTICISEQKTIDIDKTRIWLEEILWEKKYDMDVYRCKGVLSVQNSDQLHTL 343
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
Q V + P + W +E R+NK+VFIG NL E L F+ C+
Sbjct: 344 QAVRELYEIVPARKWEREENRMNKIVFIGHNLKEDVLIHSFRACVT 389
>gi|386398795|ref|ZP_10083573.1| putative GTPase, G3E family [Bradyrhizobium sp. WSM1253]
gi|385739421|gb|EIG59617.1| putative GTPase, G3E family [Bradyrhizobium sp. WSM1253]
Length = 332
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 103/276 (37%), Positives = 156/276 (56%), Gaps = 20/276 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVR DLV + L + I+IETTGLA PAP+I++F DE++S+
Sbjct: 63 INNGCICCTVRSDLVSTITNLLSGTR-PIRRILIETTGLADPAPIIQSFIVDEVLSEVTA 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+ + + L + N A EQ+A+AD ++++K+DLV + I+
Sbjct: 122 LDAVVTVVDAINIDRWLADQGSGE--NVAAEQIAFADVLVISKLDLVDQDARARCEATIR 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN MAP+ A +D+ ++ V +DL+ + ++ + HE
Sbjct: 180 TINPMAPMVRAIDSRIDVASIVDVKAFDLKNC---LSIEPLLLSELEHE----------- 225
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD +V SV + +E LD WL + E GE L R KG+LS++G +++VF GV
Sbjct: 226 ---HDLSVVSVEVRAERALDGPRFFRWLNVFVLENGETLLRCKGVLSLAGEARRWVFHGV 282
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRK 277
H TL+G PG+AW +E R + +VFIGR LD T +R
Sbjct: 283 HMTLEGRPGRAWASNEHRASAIVFIGRGLDATRIRN 318
>gi|227823445|ref|YP_002827418.1| cobalamin synthesis protein/P47K family protein [Sinorhizobium
fredii NGR234]
gi|227342447|gb|ACP26665.1| putative cobalamin synthesis protein/P47K family protein
[Sinorhizobium fredii NGR234]
Length = 363
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 171/302 (56%), Gaps = 29/302 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 66 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDAIIVETTGLADPVPVAQTFFMDDDVRAKTE 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD ++LNK DLVT EL + ++
Sbjct: 125 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLLNKTDLVTPEELERIEATVR 178
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER--------IDSEVHVD---NSHCATHHHE 170
IN A + + +D+ VL G ++LE+ +D + H D C H+
Sbjct: 179 VINPSARIYRTQRSDIDLGKVLDQGAFNLEKALENDPHFLDQDEHDDHVCGPDCDHDHNH 238
Query: 171 SAHGHHEGHHH----------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDL 220
H HH H H + +HD V S+++ G ++ D W++++ + G ++
Sbjct: 239 HDHDHHHDHDHHHHHHHDHAPSPIHDVTVQSISLRG-GEMNPDRFFPWIQKITQTDGPNI 297
Query: 221 YRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
R+KGI++ +G ++YV QGVH ++G + W EKR +LVFIGR+LD L + FK
Sbjct: 298 LRLKGIIAFAGDAERYVVQGVHMIIEGDHQRPWKDGEKRETRLVFIGRDLDREKLERTFK 357
Query: 281 GC 282
C
Sbjct: 358 AC 359
>gi|398812442|ref|ZP_10571198.1| putative GTPase, G3E family [Variovorax sp. CF313]
gi|398077933|gb|EJL68877.1| putative GTPase, G3E family [Variovorax sp. CF313]
Length = 350
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/295 (36%), Positives = 167/295 (56%), Gaps = 19/295 (6%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQG--QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DL + L L AKK+QG FD +VIETTGLA P PV +TF D+ +++
Sbjct: 61 MSNGCVCCTIREDLREALQLLAAKKRQGLLDFDRVVIETTGLADPGPVAQTFFMDDEIAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD ++TLVD+KHA Q LN+ + EA QV +AD+I ++K +LV+ E +L
Sbjct: 121 SYLLDSILTLVDAKHAPQQLNDRQ------EARRQVGFADQIFISKSELVSAEETDALIH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE-RIDSEVHVDNSHCATHHHESAHGHHE 177
R+KH+N AP + A +G V + + + G++L ++D + H H+ AHG
Sbjct: 175 RLKHMNPRAPQQKAHFGDVPLKDIFDLRGFNLNAKLDIDPDFLKEEDDHHDHDHAHGEAC 234
Query: 178 GHHHNHMH---------DSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILS 228
H + D V S ++ D +++D+L ++ G + R KG+L+
Sbjct: 235 DHPSHKHEGGHGHHHHTDDDVKSFVYKADRPFDPAKLEDFLGAIVNIYGPRMLRYKGVLN 294
Query: 229 VSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+ G+E++ +FQGVH + G WG DE R +++VFIG L L +G + CL
Sbjct: 295 MKGTERKVIFQGVHQLMGSDLGPEWGKDEARQSRMVFIGIELPREILEQGLEQCL 349
>gi|153008704|ref|YP_001369919.1| cobalamin synthesis protein P47K [Ochrobactrum anthropi ATCC 49188]
gi|404318503|ref|ZP_10966436.1| cobalamin synthesis protein P47K [Ochrobactrum anthropi CTS-325]
gi|151560592|gb|ABS14090.1| cobalamin synthesis protein P47K [Ochrobactrum anthropi ATCC 49188]
Length = 393
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 169/322 (52%), Gaps = 47/322 (14%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD IV+ETTGLA P PV +TF D+ V
Sbjct: 79 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIVVETTGLADPVPVAQTFFMDDDVRAKTG 137
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL ++ ++
Sbjct: 138 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPQELAAIEATVR 191
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHH-- 169
IN A + + S+ +D VL G +DL+R+ D HV C H
Sbjct: 192 AINPHAIIHRTERASIPLDRVLDRGAFDLKRVLDNDPHFLDHDHPDHVCGPDCDHDHDHH 251
Query: 170 ---------------------------ESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDL 202
H H + +HD V SV++ + G +D
Sbjct: 252 GHDHGHHHHAHDHDHHDHHHDHDHVCGPDCDHDHHHDHASPIHDVTVKSVSLRA-GEIDP 310
Query: 203 DEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINK 262
+ W++ + + +G ++ R+KGI++ +YV QGVH ++G +AW DEKR ++
Sbjct: 311 AKFFPWIQNITQTQGPNILRLKGIIAFKDDPDRYVVQGVHMIIEGDHQRAWKEDEKRESR 370
Query: 263 LVFIGRNLDETALRKGFKGCLA 284
LVFIGR LD AL+ GF+ A
Sbjct: 371 LVFIGRELDPAALKAGFENSQA 392
>gi|332528833|ref|ZP_08404807.1| cobalamin synthesis protein, P47K [Hylemonella gracilis ATCC 19624]
gi|332041692|gb|EGI78044.1| cobalamin synthesis protein, P47K [Hylemonella gracilis ATCC 19624]
Length = 350
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/299 (39%), Positives = 178/299 (59%), Gaps = 27/299 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL--AKKKQG--QFDHIVIETTGLAKPAPVIETFCTDELVS 57
+NNGC+CCT+R DL + LQL AKK+QG F+ +VIETTGLA P PV +TF D+ ++
Sbjct: 61 LNNGCVCCTIREDL-RTTLQLLAAKKRQGLLDFERVVIETTGLADPGPVTQTFFMDDEIA 119
Query: 58 QYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLT 117
+ LD +ITLVD+KHA Q L+E + EA QV +AD+I L+K DLV + E+ +L
Sbjct: 120 ESYLLDSIITLVDAKHANQQLDERQ------EARRQVGFADQIFLSKTDLVAKEEVEALI 173
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHC------------- 164
R+KH+N AP K +G+V + V + G++L ++++ +D
Sbjct: 174 HRLKHMNPRAPQKAVHFGAVPISEVFDLRGFNL---NAKLEIDPDFLNADEHDHDHGHDH 230
Query: 165 ATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMK 224
HHH+ HG H H H+H HD V S SE D +++D+L ++ G + R K
Sbjct: 231 DHHHHDHEHGEHCDHPHHHHHDDDVKSFVFKSERAFDPAKLEDFLGAIVNIYGPRMLRYK 290
Query: 225 GILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
G+L++ G++++ +FQGVH + G WGP E+R++K+VFIG +L + L +G + L
Sbjct: 291 GVLNMKGTDRKVIFQGVHQLMGSDLGPEWGPQEQRLSKMVFIGIDLPKDILVQGLQQSL 349
>gi|405378684|ref|ZP_11032599.1| putative GTPase, G3E family [Rhizobium sp. CF142]
gi|397324784|gb|EJJ29134.1| putative GTPase, G3E family [Rhizobium sp. CF142]
Length = 361
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/300 (37%), Positives = 173/300 (57%), Gaps = 25/300 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 68 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 126
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +I+NK DLVT EL + + +
Sbjct: 127 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVIINKTDLVTPEELAQIEDIVN 180
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHV-----DNSHCAT--------- 166
IN A V VD+ VL G ++LER ++++ H D+ C
Sbjct: 181 AINPAARVYKTSRSGVDLARVLDQGAFNLERALENDPHFLEHGHDDHVCGPDCDHDHHGH 240
Query: 167 --HHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMK 224
HHH+ H HH + +HD V SV++ G ++ + W++++ + +G ++ R+K
Sbjct: 241 DHHHHDHDHHHHHHGEMSAIHDITVQSVSLRG-GEMNPERFFPWIQKITQTQGPNILRLK 299
Query: 225 GILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
GI++ ++YV QGVH ++G + W EK ++LVFIGR+LD T L + FK C A
Sbjct: 300 GIIAFKDDAERYVVQGVHMIIEGDHQRPWKDGEKHESRLVFIGRDLDRTKLEESFKACEA 359
>gi|119897501|ref|YP_932714.1| putative GTPase [Azoarcus sp. BH72]
gi|119669914|emb|CAL93827.1| putative GTPase [Azoarcus sp. BH72]
Length = 330
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 162/281 (57%), Gaps = 18/281 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CC VRGDL++++ L K++ G+FD I+IETTGLA PAPV+++F D+ + Q +
Sbjct: 63 LNNGCICCKVRGDLIRVVSGLLKRR-GRFDGILIETTGLADPAPVVQSFMADDEIRQQAR 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
+DGV+ +VD+ H + L + EA Q+A+A +++NK +L E + + I
Sbjct: 122 VDGVVCVVDACHFLTGLERSR------EAGVQLAHASLVVINKAELADEAVVAQVEREIA 175
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+N A V + G+V +L G Y+L R+ E+ + + G H
Sbjct: 176 RLNPGATVLRSARGAVPAAALLDQGAYELPRL--ELPAAPAAARARYVPVPQGRH----- 228
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
++ V++V + L+ WL+RL+ E+GE L R KGI++++G+++++VFQGV
Sbjct: 229 ----TDGLACVSLVLQRPLERGRFLAWLQRLVTERGEKLLRTKGIVALAGADRRFVFQGV 284
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
H +D + W +E R ++LVFIG LD++ LR G C
Sbjct: 285 HMMVDSDFDRPWRTEETRDSRLVFIGHGLDDSELRAGLDAC 325
>gi|239832635|ref|ZP_04680964.1| cobalamin synthesis protein P47K [Ochrobactrum intermedium LMG
3301]
gi|444309683|ref|ZP_21145315.1| cobalamin synthesis protein P47K [Ochrobactrum intermedium M86]
gi|239824902|gb|EEQ96470.1| cobalamin synthesis protein P47K [Ochrobactrum intermedium LMG
3301]
gi|443486950|gb|ELT49720.1| cobalamin synthesis protein P47K [Ochrobactrum intermedium M86]
Length = 395
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 173/322 (53%), Gaps = 47/322 (14%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V
Sbjct: 81 MNNGCICCTVRGDLIRVVEGLMRRP-GRFDAIIVETTGLADPVPVAQTFFMDDDVRAKTG 139
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL ++ ++
Sbjct: 140 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPQELAAIEATVR 193
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHHES 171
IN A + + S+ +D VL G +DL+R+ D HV C HH+
Sbjct: 194 AINPHAIIHRTERASIPLDRVLDRGAFDLKRVLDNDPHFLDHDHPDHVCGPDCDHDHHDH 253
Query: 172 AHGHHEGHHH-----------------------------NHMHDSAVSSVTIVSEGTLDL 202
H H H H + +HD V SV++ + G +D
Sbjct: 254 DHHGHHHHAHDHDHDHHHDHDHVCGPDCDHDHHHHHDHASPIHDVTVKSVSLRA-GEIDP 312
Query: 203 DEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINK 262
+ W++ + + +G ++ R+KGI++ +YV QGVH ++G +AW DEKR ++
Sbjct: 313 AKFFPWIQNITQTQGPNILRLKGIIAFKDDPDRYVVQGVHMIIEGDHQRAWKEDEKRESR 372
Query: 263 LVFIGRNLDETALRKGFKGCLA 284
LVFIGR LD AL+ GF+ A
Sbjct: 373 LVFIGRELDPAALKAGFENSQA 394
>gi|398355155|ref|YP_006400619.1| metal chaperone YciC [Sinorhizobium fredii USDA 257]
gi|390130481|gb|AFL53862.1| putative metal chaperone YciC [Sinorhizobium fredii USDA 257]
Length = 365
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 172/304 (56%), Gaps = 31/304 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 66 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDAIIVETTGLADPVPVAQTFFMDDDVRAKTE 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD ++LNK DLV+ EL + ++
Sbjct: 125 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLLNKTDLVSPEELERIEATVR 178
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHV------DNSHCATH------- 167
IN A + + +D+ VL G ++LER ++++ H D+ C
Sbjct: 179 VINPSARIYRTQRSEIDLGKVLDQGAFNLERALENDPHFLDQGEHDDHVCGPDCDHDHHH 238
Query: 168 ---------HHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGE 218
H HH H + +HD V S+++ G ++ + W++++ + G
Sbjct: 239 HDHDHHHHDHDHDHGHHHHDHAPSPIHDVTVQSISLRG-GEMNPERFFPWIQKITQTDGP 297
Query: 219 DLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKG 278
++ R+KGI++ +G ++YV QGVH ++G +AW EKR ++LVFIGR+LD L +
Sbjct: 298 NILRLKGIIAFAGDAERYVVQGVHMIIEGDHQRAWKDGEKRESRLVFIGRDLDREKLERT 357
Query: 279 FKGC 282
FK C
Sbjct: 358 FKAC 361
>gi|312797555|ref|YP_004030477.1| Low-affinity zinc transport protein [Burkholderia rhizoxinica HKI
454]
gi|312169330|emb|CBW76333.1| Low-affinity zinc transport protein [Burkholderia rhizoxinica HKI
454]
Length = 352
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 170/302 (56%), Gaps = 29/302 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L L+++K+ +FD +VIETTGLA P PV +TF DE ++
Sbjct: 61 MSNGCICCTIRGDLSRALSDLSEQKREGKLKFDRVVIETTGLANPGPVAQTFFIDESIAD 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD+KHA Q L+E +E V+ QV +ADR+ + K DLV E L L
Sbjct: 121 EFLLDAVITLVDAKHANQQLDE-------HEVVQRQVGFADRLFITKADLVDEATLADLR 173
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
R+ +N AP+++ +G+ D+ + + G++L ++++ +D A H+ AH H
Sbjct: 174 HRLLQMNPKAPIQVVNFGNADIKEIFDLRGFNL---NAKLEIDPGFLAEDGHDHAHHHEH 230
Query: 178 GHHHNHMH---------------DSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYR 222
GH H H D + S SE D +++D+L +++ GE L R
Sbjct: 231 GHDHAHCDHDHDHCTHGHHHAHHDDKIKSFVYRSERAFDPQKLEDFLGGILQIYGERLLR 290
Query: 223 MKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
KG+L + G +++ VFQGVH + W P EK+I+K+VFIG +L + G C
Sbjct: 291 YKGVLFMKGIDRKVVFQGVHQMMGSDLAARWLPAEKKISKMVFIGVDLPRDLITDGLDAC 350
Query: 283 LA 284
LA
Sbjct: 351 LA 352
>gi|418940563|ref|ZP_13493924.1| cobalamin synthesis protein P47K [Rhizobium sp. PDO1-076]
gi|375052734|gb|EHS49140.1| cobalamin synthesis protein P47K [Rhizobium sp. PDO1-076]
Length = 369
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 170/310 (54%), Gaps = 34/310 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 65 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRSKTE 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLV+ EL + ++
Sbjct: 124 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVVINKADLVSHDELHQIEHIVR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHHES 171
IN A + VD+ VL G ++L+R D+ HV C H
Sbjct: 178 AINPSARIYSTTRSGVDLSKVLDQGAFNLDRALENDPHFLDHDAPDHVCGPDCGHDHGHD 237
Query: 172 AHGHHEGHHHNHMH-------------DSAVSSVTIVS----EGTLDLDEVDDWLERLIE 214
H H +H H SA+ VT+VS G ++ D W++++ +
Sbjct: 238 HGHDHHHDHDHHHHDHGHAHHDHHDHAPSAIHDVTVVSVSLRGGEMNPDRFFPWIQKVTQ 297
Query: 215 EKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETA 274
+G ++ R+KGI++ G E++YV QGVH ++G + W +EKR ++LVFIGR+LD
Sbjct: 298 TQGPNILRLKGIIAFKGDEERYVVQGVHMIIEGDHQRPWKENEKRESRLVFIGRDLDREK 357
Query: 275 LRKGFKGCLA 284
L FK C A
Sbjct: 358 LEASFKACEA 367
>gi|422323571|ref|ZP_16404610.1| hypothetical protein HMPREF0005_00975 [Achromobacter xylosoxidans
C54]
gi|317401426|gb|EFV82059.1| hypothetical protein HMPREF0005_00975 [Achromobacter xylosoxidans
C54]
Length = 376
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 167/317 (52%), Gaps = 43/317 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCTVRGDL++ L L K++ F+ +++ETTG+A P PV +TF D+ +++
Sbjct: 68 LSNGCVCCTVRGDLMRTLSDLRAKREAGTLNFERVILETTGMANPGPVCQTFFMDDDIAE 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
Y +LD V+T+VD+KH M L+E +P EA +QV +ADRI+++K DLV + + +L
Sbjct: 128 YYRLDAVVTVVDAKHGMATLDE-QP-----EAQKQVGFADRILISKKDLVNDVDYEALRN 181
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHH--------- 169
R+ +N AP+ +G D+ ++ + G++L I + +D A H
Sbjct: 182 RLLRMNPRAPITPVNFGDADLKSIIDISGFNLNSI---LDIDPDFLADEHPDAAHSHAHG 238
Query: 170 ----------------------ESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDD 207
E + HHH+ HD + + S D +++
Sbjct: 239 HGHDHDHGHDHHGHDHDHDHDGECGAHCNHAHHHHPKHDDEIGAFVFRSNKPFDPARLEE 298
Query: 208 WLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIG 267
+L +++ G DL R KGIL + G ++ +FQGVH + PGK W EK K+VFIG
Sbjct: 299 FLGGVVQVYGPDLLRYKGILYMKGINRRMLFQGVHMMMGAEPGKPWTAAEKPSTKMVFIG 358
Query: 268 RNLDETALRKGFKGCLA 284
R L + +G + CLA
Sbjct: 359 RKLPQEIFTRGLEQCLA 375
>gi|15890483|ref|NP_356155.1| cobalamin synthesis protein [Agrobacterium fabrum str. C58]
gi|15158718|gb|AAK88940.1| cobalamin synthesis protein [Agrobacterium fabrum str. C58]
Length = 375
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 166/320 (51%), Gaps = 49/320 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 66 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT E+ + + ++
Sbjct: 125 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVVVNKTDLVTPEEVARIEDIVR 178
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHES---------- 171
IN A + VD+ VL G ++LER ++ H H HE
Sbjct: 179 AINPSARIYKTTRSGVDLARVLDQGAFNLER----ALENDPHFLEHGHEDHACGPDCDHH 234
Query: 172 ---------------------------AHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDE 204
H + +HD V SV++ G ++ +
Sbjct: 235 HHDHGHDHGHDHHHHDHDHGHHDHAHDHGHDHHHGAVSPIHDVTVQSVSLRG-GEMNPER 293
Query: 205 VDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLV 264
W++++ + G ++ R+KGI++ G ++YV QGVH ++G + W DEKR ++LV
Sbjct: 294 FFPWIQKVTQTDGPNILRLKGIIAFKGDAERYVVQGVHMIIEGDHQRPWKEDEKRESRLV 353
Query: 265 FIGRNLDETALRKGFKGCLA 284
FIGR LD L FK CLA
Sbjct: 354 FIGRELDREKLENSFKACLA 373
>gi|378827516|ref|YP_005190248.1| putative cobalamin synthesis protein/P47K family protein
[Sinorhizobium fredii HH103]
gi|365180568|emb|CCE97423.1| putative cobalamin synthesis protein/P47K family protein
[Sinorhizobium fredii HH103]
Length = 364
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 169/303 (55%), Gaps = 30/303 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 66 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDAIIVETTGLADPVPVAQTFFMDDDVRAKTE 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD ++LNK DLV+ EL + ++
Sbjct: 125 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLLNKTDLVSPEELERIEATVR 178
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI-----------DSEVHVDNSHCATHHHE 170
IN A + + +D+ VL G ++LER + + HV C HH
Sbjct: 179 VINPSARIYRTQRSDIDLGKVLDQGAFNLERALENDPHFLDQGEQDDHVCGPDCDHDHHH 238
Query: 171 SAHGHHEGHHH-----------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGED 219
H HH H + +HD V S+++ G ++ + W++++ + G +
Sbjct: 239 HDHDHHHHDHDHDHHHHHDHAPSPIHDVTVQSISLRG-GEMNPERFFPWIQKITQTDGPN 297
Query: 220 LYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
+ R+KGI++ +G ++YV QGVH ++G + W EKR +LVFIGR+LD L + F
Sbjct: 298 ILRLKGIIAFAGDAERYVVQGVHMIIEGDHQRPWKEGEKRETRLVFIGRDLDREKLERTF 357
Query: 280 KGC 282
K C
Sbjct: 358 KAC 360
>gi|383760219|ref|YP_005439205.1| cobalamin synthesis protein/P47K family protein [Rubrivivax
gelatinosus IL144]
gi|381380889|dbj|BAL97706.1| cobalamin synthesis protein/P47K family protein [Rubrivivax
gelatinosus IL144]
Length = 345
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 160/288 (55%), Gaps = 12/288 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DL L LA++++ FD +VIETTGLA P PV +TF D+ +++
Sbjct: 63 MSNGCVCCTIREDLRSTLSDLAERRRKGLIAFDRVVIETTGLADPGPVAQTFFMDDEIAE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD V+TLVD+ HA + LN EA QV +ADR+ ++K DL L +L
Sbjct: 123 SYLLDSVVTLVDAVHADEQLN------TRQEARRQVGFADRLFISKADLAPTAALDALQY 176
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLER---IDSEVHVDNSHCATHHHESAHGH 175
R++ +N AP + +G V + + + G++L ID + D +H HHH G
Sbjct: 177 RLRQMNPRAPQRSVHFGEVAIAEIFDIKGFNLSAKLDIDPDFLADQAHGHDHHHHHHDGE 236
Query: 176 HEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQ 235
H +H HD V S ++ +++D+L +++ G + R KG+L + GS+++
Sbjct: 237 ACDHPSHHAHDDDVKSFVFRAKRPFSPAKLEDFLGSVVQVYGPKMLRYKGVLYMKGSDRK 296
Query: 236 YVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
VFQGVH + G W P E +++KLVFIG +L L +G + CL
Sbjct: 297 VVFQGVHQLMGSDLGPKWAPGEDKLSKLVFIGIDLPRDILEQGLEQCL 344
>gi|408378879|ref|ZP_11176475.1| hypothetical protein QWE_14822 [Agrobacterium albertimagni AOL15]
gi|407747329|gb|EKF58849.1| hypothetical protein QWE_14822 [Agrobacterium albertimagni AOL15]
Length = 368
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/309 (36%), Positives = 170/309 (55%), Gaps = 34/309 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 65 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRSKTE 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLV+ EL + ++
Sbjct: 124 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVVINKADLVSHDELHQIEHIVR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHHES 171
IN A + VD+ VL G ++LER D HV C HH
Sbjct: 178 AINPSARIYSTTRSGVDLAKVLDQGAFNLERALENDPHFLDHDDPDHVCGPDCDHDHHHH 237
Query: 172 AHGHHEGHHH----------------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEE 215
H H GH H + +HD V+SV++ G ++ D W++++ +
Sbjct: 238 GHDHDHGHDHHHHDHGHGHHHHDHAPSAIHDVTVTSVSLRG-GEMNPDRFFPWIQKVTQT 296
Query: 216 KGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETAL 275
+G ++ R+KGI++ G E++YV QGVH ++G + W EKR ++LVFIGR LD L
Sbjct: 297 QGPNILRLKGIIAFKGDEERYVVQGVHMIVEGDHQRPWKDGEKRESRLVFIGRELDREKL 356
Query: 276 RKGFKGCLA 284
FK C A
Sbjct: 357 EASFKACEA 365
>gi|121606318|ref|YP_983647.1| cobalamin synthesis protein, P47K [Polaromonas naphthalenivorans
CJ2]
gi|120595287|gb|ABM38726.1| cobalamin synthesis protein, P47K [Polaromonas naphthalenivorans
CJ2]
Length = 350
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 167/300 (55%), Gaps = 29/300 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQG--QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CC++R DL + L L AKK++G FD +VIETTGLA P PV +TF DE +++
Sbjct: 61 MNNGCICCSIREDLRETLQLLAAKKRKGLLAFDRVVIETTGLADPGPVAQTFFMDEEIAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD ++TLVD+KHA L++ + EA Q+ +AD+I ++K DLV E E+ +L
Sbjct: 121 QYLLDSILTLVDAKHAQTQLDDRQ------EARRQIGFADQIFISKTDLVAEGEVQALMH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHE-------- 170
R+ H+N AP K +G V + V + G++L ++++ +D
Sbjct: 175 RLTHMNPRAPQKAVHFGEVAIADVFDLRGFNL---NAKLDIDPDFLKADEPHDHDHHDHE 231
Query: 171 -------SAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRM 223
+H +G HH+H D V S S+ +++D+L ++ G + R
Sbjct: 232 HGEHCDHPSHAAEQGSHHHH--DDDVKSFVFRSDKPFSPAKLEDFLGAVVNIYGPRMLRY 289
Query: 224 KGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
KG+L++ G+E++ +FQGVH + G AW EK+ +K+VFIG +L + +G + CL
Sbjct: 290 KGVLNMEGTERKVIFQGVHQLMGSDLGPAWLEGEKKTSKMVFIGIDLPKDIFVQGLEQCL 349
>gi|421592820|ref|ZP_16037475.1| cobalamin synthesis protein P47K family [Rhizobium sp. Pop5]
gi|403701411|gb|EJZ18264.1| cobalamin synthesis protein P47K family [Rhizobium sp. Pop5]
Length = 352
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 166/293 (56%), Gaps = 19/293 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 67 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI LVD+KH L + + EA +Q+A+AD +++NK DLVT EL + + ++
Sbjct: 126 LDAVIALVDAKHLPLRLKDSR------EAEDQIAFADVVVINKSDLVTPEELDVIEDIVR 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI----------DSEVHVDNSHCATHHHES 171
IN A V VD+ VL G ++LER + HV C HH
Sbjct: 180 AINPAARVYKTSRSGVDLARVLDQGAFNLERALENDPHFLEHGHDDHVCGPDCDHDHHHD 239
Query: 172 AHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSG 231
HH G + +HD V SV++ G ++ + W++++ + +G ++ R+KGI++
Sbjct: 240 HDHHHHGAM-SAIHDVTVQSVSLRG-GEMNAERFFPWVQKITQVQGPNILRLKGIVAFKD 297
Query: 232 SEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
++YV QGVH ++G + W EK ++LVFIGR+LD L FK C A
Sbjct: 298 DPERYVVQGVHMIIEGDHQRPWKDGEKHESRLVFIGRDLDREKLEASFKACEA 350
>gi|348589518|ref|YP_004873980.1| putative metal chaperone [Taylorella asinigenitalis MCE3]
gi|347973422|gb|AEP35957.1| Putative metal chaperone [Taylorella asinigenitalis MCE3]
Length = 356
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 169/302 (55%), Gaps = 28/302 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKK---KQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CC+VR DL LL L + + F+ ++IETTG+A P P+ +TF ++ V+
Sbjct: 64 LNNGCICCSVRVDLENTLLDLKARLDSGESNFERVIIETTGVANPGPICQTFFLNDEVAA 123
Query: 59 YVKLDGVITLVDSKHAMQHL-NEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLT 117
+ +LD VIT+VD+KH M L NE+ EA QV +ADRI+++K+DLV++ E L
Sbjct: 124 FYRLDAVITIVDAKHGMDTLTNEI-------EAQTQVGFADRILISKVDLVSKEEYEDLR 176
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
R+ H+N A + +G VD+ +L V G++L I E+ + C HE H E
Sbjct: 177 HRLVHMNPRAEIMPVNFGEVDLKKILSVSGFNLNEI-LEIDPEFLKCEDDEHEHDHECGE 235
Query: 178 GHHHNHMH---------------DSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYR 222
HH+H H + A+ + S+ D +D++L L++ G D+YR
Sbjct: 236 HCHHDHEHDHDHHHHHDHHHSHHNDAIKAFVYTSDKPFDPVRLDEFLSGLVQVYGPDMYR 295
Query: 223 MKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
KGI+ + G+ +++ QGVH L PG+ WG +K+ +K+VFIG+NL +G C
Sbjct: 296 YKGIIYIKGAPVKFLLQGVHMVLGTNPGQPWGSSKKQ-SKIVFIGKNLPHDVFTEGLNQC 354
Query: 283 LA 284
LA
Sbjct: 355 LA 356
>gi|402489421|ref|ZP_10836219.1| cobalamin synthesis protein P47K [Rhizobium sp. CCGE 510]
gi|401811697|gb|EJT04061.1| cobalamin synthesis protein P47K [Rhizobium sp. CCGE 510]
Length = 367
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/308 (35%), Positives = 170/308 (55%), Gaps = 34/308 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 67 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI LVD+KH L + + EA +Q+A+AD +I+NK DLVT EL + + ++
Sbjct: 126 LDAVIALVDAKHLPLRLKDSR------EAEDQIAFADVVIINKTDLVTPEELDVIEDIVR 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHV-----DNSHCAT--------- 166
IN A V VD+ VL G ++LER ++++ H D+ C
Sbjct: 180 AINPAARVYKPSRSGVDLARVLDQGAFNLERALENDPHFLEQGHDDHVCGPDCDHDHHHD 239
Query: 167 ----------HHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK 216
H H H +G + +HD V SV++ G ++ + W++++ + +
Sbjct: 240 HDHHHHDHHGHDHHHHGAHQQGAM-SAIHDVTVQSVSLRG-GEMNAERFFPWIQKITQTQ 297
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
G ++ R+KGI++ ++YV QGVH ++G + W EK ++LVFIGR+LD L
Sbjct: 298 GPNILRLKGIIAFRDDPERYVVQGVHMIIEGDHQRPWKEGEKHESRLVFIGRDLDREKLE 357
Query: 277 KGFKGCLA 284
FK C A
Sbjct: 358 ASFKACEA 365
>gi|335038203|ref|ZP_08531494.1| cobalamin synthesis protein [Agrobacterium sp. ATCC 31749]
gi|333790460|gb|EGL61866.1| cobalamin synthesis protein [Agrobacterium sp. ATCC 31749]
Length = 375
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 166/320 (51%), Gaps = 49/320 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 66 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT E+ + + ++
Sbjct: 125 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVVVNKTDLVTPEEVARIEDIVR 178
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHES---------- 171
IN A + VD+ VL G ++LER ++ H H HE
Sbjct: 179 AINPSARIYKTTRSGVDLARVLDQGAFNLER----ALENDPHFLEHGHEDHACGPDCDHH 234
Query: 172 ---------------------------AHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDE 204
H + +HD V SV++ G ++ +
Sbjct: 235 HHDHGHDHGHDHHHHDHDHGHHDHAHDHGHDHHHGAVSPIHDVTVQSVSLRG-GEMNPER 293
Query: 205 VDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLV 264
W++++ + G ++ R+KGI++ G ++YV QGVH ++G + W DEKR ++LV
Sbjct: 294 FFPWIQKVTQTDGPNILRLKGIIAFKGDAERYVVQGVHMIIEGDHQRPWKEDEKRESRLV 353
Query: 265 FIGRNLDETALRKGFKGCLA 284
FIGR +D L FK CLA
Sbjct: 354 FIGREMDREKLENSFKACLA 373
>gi|422348809|ref|ZP_16429701.1| hypothetical protein HMPREF9465_00591 [Sutterella wadsworthensis
2_1_59BFAA]
gi|404658861|gb|EKB31723.1| hypothetical protein HMPREF9465_00591 [Sutterella wadsworthensis
2_1_59BFAA]
Length = 329
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/285 (36%), Positives = 166/285 (58%), Gaps = 25/285 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCT+RGDL K+L L ++ +G+ FD++VIET+G+A P PV +TF D+ V+
Sbjct: 66 MNNGCVCCTIRGDLSKVLTDLRLRRSRGEIKFDYVVIETSGVANPGPVAQTFFMDDAVAA 125
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+ +LDGV+T+VD KH L+E A +QV +ADRI+L+K DL T E+ ++ +
Sbjct: 126 FFRLDGVVTVVDCKHGSATLDEEA------AARDQVGFADRILLSKTDLCTAEEVAAMEQ 179
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ +NA AP++ G +D VL + G+++ + + VD
Sbjct: 180 RLRQMNARAPIRRVNMGECPVDEVLNITGFNMNDV---LDVD------------PAFFNN 224
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HH H H+ + S S+ + +++ ++ L G+D+ R KG+L +SG++++ VF
Sbjct: 225 DHHMHHHNDDIHSFVYESDRPFNPMKLERYIASLTSVYGQDMLRYKGVLYLSGTDRRVVF 284
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH WG D K +K+VFIGRNL E A+++G CL
Sbjct: 285 QGVHMLAVSDVLDTWG-DRKPFSKIVFIGRNLPEEAIKRGLATCL 328
>gi|222087139|ref|YP_002545674.1| cobalamin synthesis protein [Agrobacterium radiobacter K84]
gi|221724587|gb|ACM27743.1| cobalamin synthesis protein [Agrobacterium radiobacter K84]
Length = 367
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/308 (36%), Positives = 170/308 (55%), Gaps = 33/308 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 66 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLV+ EL + + ++
Sbjct: 125 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVVINKSDLVSSEELAQIEDIVR 178
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHV-----DNSHCAT--------- 166
IN A V VD+ VL G ++LER ++++ H D+ C
Sbjct: 179 AINPAARVYKTTRSGVDLARVLNQGAFNLERALENDPHFLDHGPDDHVCGPDCGHDHHDH 238
Query: 167 ----------HHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK 216
HH H H H + +HD V SV++ G ++ D W++++ +
Sbjct: 239 DHHHHDHDHHDHHHHDHDHGHHHAPSPIHDVTVQSVSLRG-GEMNPDRFFPWIQKVTQTD 297
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
G + R+KGI++ G ++YV QGVH ++G +AW EK ++LVFIGR LD L
Sbjct: 298 GPKILRLKGIIAFKGDPERYVVQGVHMIIEGDHQRAWKDGEKHESRLVFIGRELDREKLE 357
Query: 277 KGFKGCLA 284
K FK C A
Sbjct: 358 KSFKACEA 365
>gi|334317626|ref|YP_004550245.1| cobalamin synthesis protein P47K [Sinorhizobium meliloti AK83]
gi|384530751|ref|YP_005714839.1| cobalamin synthesis protein P47K [Sinorhizobium meliloti BL225C]
gi|384537458|ref|YP_005721543.1| hypothetical protein SM11_chr3038 [Sinorhizobium meliloti SM11]
gi|407721935|ref|YP_006841597.1| cobalamin synthesis protein P47K [Sinorhizobium meliloti Rm41]
gi|418401082|ref|ZP_12974616.1| cobalamin synthesis protein P47K [Sinorhizobium meliloti
CCNWSX0020]
gi|433614699|ref|YP_007191497.1| Putative GTPases (G3E family) [Sinorhizobium meliloti GR4]
gi|333812927|gb|AEG05596.1| cobalamin synthesis protein P47K [Sinorhizobium meliloti BL225C]
gi|334096620|gb|AEG54631.1| cobalamin synthesis protein P47K [Sinorhizobium meliloti AK83]
gi|336034350|gb|AEH80282.1| hypothetical protein SM11_chr3038 [Sinorhizobium meliloti SM11]
gi|359505018|gb|EHK77546.1| cobalamin synthesis protein P47K [Sinorhizobium meliloti
CCNWSX0020]
gi|407320167|emb|CCM68771.1| cobalamin synthesis protein P47K [Sinorhizobium meliloti Rm41]
gi|429552889|gb|AGA07898.1| Putative GTPases (G3E family) [Sinorhizobium meliloti GR4]
Length = 366
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 172/305 (56%), Gaps = 32/305 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 66 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDAIIVETTGLADPVPVAQTFFMDDDVRAKTE 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD ++LNK DLVT EL + ++
Sbjct: 125 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLLNKTDLVTPEELERVEATVR 178
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER--------IDSEVH--VDNSHCATHHHES 171
IN A + + +D+ VL G ++L+R +D E H V C HH
Sbjct: 179 VINPSARIYRTQRSEIDLGKVLDQGAFNLDRALENDPHFLDQEDHDHVCGPDCDHDHHHH 238
Query: 172 AHGHHEGHHH--------------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG 217
H HH+ H + +HD V S+++ G ++ D W++++ + G
Sbjct: 239 DHHHHDHDHDHDHDHHHHHHHDGPSPIHDVTVQSISLRG-GEMNPDRFFPWIQKITQTDG 297
Query: 218 EDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRK 277
++ R+KGI++ +G ++YV QGVH ++G + W EKR ++LVFIGR+LD + +
Sbjct: 298 PNILRLKGIIAFAGDAERYVVQGVHMIIEGDHQRPWKDGEKRESRLVFIGRDLDREKIER 357
Query: 278 GFKGC 282
FK C
Sbjct: 358 TFKAC 362
>gi|424916785|ref|ZP_18340149.1| putative GTPase, G3E family [Rhizobium leguminosarum bv. trifolii
WSM597]
gi|392852961|gb|EJB05482.1| putative GTPase, G3E family [Rhizobium leguminosarum bv. trifolii
WSM597]
Length = 362
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 170/302 (56%), Gaps = 27/302 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 67 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI LVD+KH L + + EA +Q+A+AD +I+NK DLVT EL + + ++
Sbjct: 126 LDAVIALVDAKHLPLRLKDSR------EAEDQIAFADVVIINKSDLVTPEELDVIDDIVR 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHV-----DNSHCATH-------- 167
IN A V VD+ VL G ++LER ++++ H D+ C
Sbjct: 180 AINPAARVYKTSRSGVDLARVLDQGAFNLERALENDPHFLEHGHDDHVCGPDCDHDHHHH 239
Query: 168 -----HHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYR 222
H H HH + +HD V SV++ G ++ + W++++ + +G ++ R
Sbjct: 240 DHDHDHDHHGHEHHHHGAMSAIHDVTVQSVSLRG-GQMNPERFFPWIQKVTQTQGPNILR 298
Query: 223 MKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
+KGI++ ++YV QGVH ++G + W DEK ++LVFIGR+LD L FK C
Sbjct: 299 LKGIIAFKDDPERYVVQGVHMIIEGDHQRPWKEDEKHESRLVFIGRDLDREKLEASFKAC 358
Query: 283 LA 284
A
Sbjct: 359 EA 360
>gi|209550960|ref|YP_002282877.1| cobalamin synthesis protein P47K [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536716|gb|ACI56651.1| cobalamin synthesis protein P47K [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 360
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 170/300 (56%), Gaps = 25/300 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 67 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI LVD+KH L + + EA +Q+A+AD +++NK DLVT EL + + ++
Sbjct: 126 LDAVIALVDAKHLPLRLKDSR------EAEDQIAFADVVVINKSDLVTPDELDVIEDIVR 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHV-----DNSHCATH-------- 167
IN A V VD+ VL G ++LER ++++ H D+ C
Sbjct: 180 AINPAARVYKTSRSGVDLARVLDQGAFNLERALENDPHFLEHGHDDHVCGPDCDHDHHHH 239
Query: 168 ---HHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMK 224
H H HH + +HD V SV++ G ++ + W++++ + +G ++ R+K
Sbjct: 240 DHDHDHHGHEHHHHGAMSAIHDVTVQSVSLRG-GEMNAERFFPWIQKVTQTQGPNILRLK 298
Query: 225 GILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
GI++ ++YV QGVH ++G + W DEK ++LVFIGR+LD L FK C A
Sbjct: 299 GIIAFKDDPERYVVQGVHMIIEGDHQRPWKEDEKHESRLVFIGRDLDREKLEASFKACEA 358
>gi|397661182|ref|YP_006501882.1| hypothetical protein KUI_0174 [Taylorella equigenitalis ATCC 35865]
gi|394349361|gb|AFN35275.1| hypothetical protein KUI_0174 [Taylorella equigenitalis ATCC 35865]
Length = 362
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 167/308 (54%), Gaps = 33/308 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKK---KQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CC+VR DL LL L + Q +FD ++IETTGLA P P+ +TF ++ V+
Sbjct: 63 LNNGCICCSVRVDLENTLLDLKDRLESGQSKFDRVIIETTGLANPGPICQTFFLNDDVAA 122
Query: 59 YVKLDGVITLVDSKHAMQHL-NEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLT 117
+ +LD VIT+VD+KH M L NE+ EA QV +ADRI+++K DLV++ E L
Sbjct: 123 FYRLDAVITVVDAKHGMDTLTNEI-------EAQAQVGFADRILISKRDLVSDEEYEDLR 175
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERI---DSEVHVDNSHCATHHHESAHG 174
R+ H+N A + +G VD++ +L V G++L I D E + H HH
Sbjct: 176 HRLIHMNPRAEIMPVNFGEVDLNKILSVSGFNLNEILEIDPEFLKEEEHDHDHHDHVCDD 235
Query: 175 HHEGHHHNHMH------------------DSAVSSVTIVSEGTLDLDEVDDWLERLIEEK 216
H H + + A+ + SE D ++D++L L++
Sbjct: 236 HCHHEHGDGHQHGHQHDHDHHHDHHHSHHNDAIKAFVYTSEKPFDPVKLDEFLSGLVQVY 295
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
G D+YR KGI+ + G+ +++ QGVH L PG+ WG +K+ +K+VFIG+NL
Sbjct: 296 GPDMYRYKGIIYIKGAPVKFLLQGVHMVLGTNPGQPWGTAKKQ-SKIVFIGKNLPHDVFT 354
Query: 277 KGFKGCLA 284
+G CLA
Sbjct: 355 EGLNQCLA 362
>gi|418532763|ref|ZP_13098660.1| cobalamin synthesis protein, P47K [Comamonas testosteroni ATCC
11996]
gi|371450089|gb|EHN63144.1| cobalamin synthesis protein, P47K [Comamonas testosteroni ATCC
11996]
Length = 373
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 174/318 (54%), Gaps = 42/318 (13%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DL + L L AK+++GQ FD IVIETTGLA P PV +TF D+ +++
Sbjct: 61 MSNGCICCTIREDLREALQLLAAKRRKGQVDFDRIVIETTGLADPGPVAQTFFMDDEIAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+D +ITLVD+KHA Q L++ + EA QV +AD++ L+K DLVTE E +L
Sbjct: 121 TYLIDSIITLVDAKHANQQLDDRQ------EARRQVGFADQMFLSKTDLVTEAEKEALIH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLER---IDSEVHVDNSHCATHHHESAHGH 175
R+KH+N AP++ +G V + V + G++L ID + ++ H HH SA H
Sbjct: 175 RLKHMNPRAPIRAVHFGDVPLSEVFDLRGFNLNAKLDIDPDFLKEDDHGHDHHDHSACDH 234
Query: 176 HEGH------------------------------HHNHMHDSAVSSVTIVSEGTLDLDEV 205
G H+H HD V S ++ D ++
Sbjct: 235 DHGQCEHDHDHGHQHDEHCGHDHHDHEHGEYCNHPHHHHHDDDVKSFVYRADRAFDPAKL 294
Query: 206 DDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVF 265
+D+L ++ G + R KG+L + G+ ++ +FQGVH + G W DEKR++K+VF
Sbjct: 295 EDFLGAIVNIYGPKMLRYKGVLDMKGTSRKVIFQGVHQLMGSDLGPEWEADEKRVSKMVF 354
Query: 266 IGRNLDETALRKGFKGCL 283
IG +L + LR+G CL
Sbjct: 355 IGIDLPQDILRQGLDQCL 372
>gi|398381544|ref|ZP_10539652.1| putative GTPase, G3E family [Rhizobium sp. AP16]
gi|397719076|gb|EJK79649.1| putative GTPase, G3E family [Rhizobium sp. AP16]
Length = 369
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 170/310 (54%), Gaps = 35/310 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 66 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLV+ EL + + ++
Sbjct: 125 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVVINKSDLVSSEELAQIEDIVR 178
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVH-VDNSH----CATH-------- 167
IN A V VD+ VL G ++LER ++++ H +D SH C
Sbjct: 179 AINPAARVYKTTRSGVDLARVLNQGAFNLERALENDPHFLDQSHDDHVCGPDCGHDHHDH 238
Query: 168 -------------HHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIE 214
H H H H + +HD V SV++ G ++ D W++++ +
Sbjct: 239 DHHHHGHDHDHHHHDHDHHDHGHHHAPSPIHDVTVQSVSLRG-GEMNPDRFFPWIQKVTQ 297
Query: 215 EKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETA 274
G + R+KGI++ G ++YV QGVH ++G +AW EK ++LVFIGR LD
Sbjct: 298 TDGPKILRLKGIIAFKGDPERYVVQGVHMIIEGDHQRAWKDGEKHESRLVFIGRELDREK 357
Query: 275 LRKGFKGCLA 284
L K F C A
Sbjct: 358 LEKSFNACEA 367
>gi|319940774|ref|ZP_08015114.1| cobalamin synthesis protein P47K [Sutterella wadsworthensis
3_1_45B]
gi|319805794|gb|EFW02570.1| cobalamin synthesis protein P47K [Sutterella wadsworthensis
3_1_45B]
Length = 333
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 167/289 (57%), Gaps = 31/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCT+RGDL ++L +L ++ +G+ FD+IV+ET+G+A P PV +TF D+ ++
Sbjct: 68 MNNGCVCCTIRGDLSRILTKLRLQRDKGEIDFDYIVLETSGVANPGPVAQTFFMDDAIAP 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+ +LDGV+T+VD+K+ + L++ A +QV +ADRI+++K DLVT EL L
Sbjct: 128 FFRLDGVVTVVDAKYGPKTLDDEA------AARDQVGFADRILVSKCDLVTPEELAELEA 181
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGY---DLERIDSEVHVDNSHCATHHHESAHGH 175
R++ +NA AP++ G+ +D VL + G+ D+ +D V++ H H+ +
Sbjct: 182 RLRSMNARAPMRRVDMGNCPVDVVLDIAGFNMNDVLDVDPNFFVNDHHLHHHNDDIHTFV 241
Query: 176 HEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQ 235
+E +E D ++D ++ L G+D+ R KGIL +G +++
Sbjct: 242 YE------------------TETPFDPQKLDRYIGSLTAVYGQDMLRYKGILYFAGVDRR 283
Query: 236 YVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
VFQGVH WG D K +KLVFIGRNL E A+ +G CLA
Sbjct: 284 VVFQGVHMLAVSDVMGPWG-DVKPFSKLVFIGRNLPEEAIARGLDTCLA 331
>gi|413960373|ref|ZP_11399603.1| cobalamin synthesis protein P47K [Burkholderia sp. SJ98]
gi|413932150|gb|EKS71435.1| cobalamin synthesis protein P47K [Burkholderia sp. SJ98]
Length = 322
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 153/282 (54%), Gaps = 22/282 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVR DLV + + + + ++IET+GLA PAPV++TF D V + V+
Sbjct: 62 INNGCVCCTVRTDLVASVRDMLMRFGDRLARLIIETSGLADPAPVLQTFLADPDVRERVE 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
L+ V+ +VD+ HA L++ + A EQV +ADRI++NK DLV+ + +L I+
Sbjct: 122 LESVVAVVDAMHAQSQLHD-------DIAREQVVFADRIVINKTDLVSTDAVDALVAGIR 174
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+N A ++ A+ +D + G + VDN + GH
Sbjct: 175 RLNPTARIEYAQRSRIDAHALFGTRSFS---------VDNLLAIEPNLLDEDGH------ 219
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+H HD +++S IV G +D + W+ +L++ +G L RMKG+L++ ++ F V
Sbjct: 220 DHEHDDSIASCAIVVPGGIDATRFNRWINQLVQTQGTQLLRMKGVLNMHDEPRRLHFHSV 279
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H LD G+AW DE R ++ V IGRN+D +R G C+
Sbjct: 280 HMLLDTTFGRAWMRDETRESRFVMIGRNIDAARMRDGLLSCM 321
>gi|440227914|ref|YP_007335005.1| cobalamin synthesis protein [Rhizobium tropici CIAT 899]
gi|440039425|gb|AGB72459.1| cobalamin synthesis protein [Rhizobium tropici CIAT 899]
Length = 362
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 167/307 (54%), Gaps = 36/307 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 66 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL + + ++
Sbjct: 125 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVVINKSDLVTPEELAQIEDIVR 178
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHES---------- 171
IN A V VD+ VL G ++LER ++ H H HE
Sbjct: 179 AINPAARVYKTTRSGVDLARVLNQGAFNLERALE----NDPHFLEHGHEDHVCGPDCDHD 234
Query: 172 --------------AHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG 217
H HH H + +HD V SV++ G ++ + W++++ + +G
Sbjct: 235 HHHHHDHDHDHHHHDHDHHHHHAPSPIHDVTVQSVSLRG-GEMNAERFFPWIQKITQTQG 293
Query: 218 EDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRK 277
++ R+KGI++ ++YV QGVH ++G + W EK ++LVFIGR LD L +
Sbjct: 294 PNILRLKGIIAFKDDPERYVVQGVHMIIEGDHQRPWKDGEKHESRLVFIGRELDREKLEQ 353
Query: 278 GFKGCLA 284
FK C A
Sbjct: 354 SFKACEA 360
>gi|319778937|ref|YP_004129850.1| metal chaperone [Taylorella equigenitalis MCE9]
gi|317108961|gb|ADU91707.1| Putative metal chaperone [Taylorella equigenitalis MCE9]
Length = 358
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 113/308 (36%), Positives = 172/308 (55%), Gaps = 33/308 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKK---KQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CC+VR DL LL L + Q +FD ++IETTGLA P P+ +TF ++ V+
Sbjct: 59 LNNGCICCSVRVDLENTLLDLKDRLESGQSKFDRVIIETTGLANPGPICQTFFLNDDVAA 118
Query: 59 YVKLDGVITLVDSKHAMQHL-NEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLT 117
+ +LD VIT+VD+KH M L NE+ EA QV +ADRI+++K DLV++ E L
Sbjct: 119 FYRLDAVITVVDAKHGMDTLTNEI-------EAQAQVGFADRILISKRDLVSDEEYEDLR 171
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERI---DSEV------------HVDNS 162
R+ H+N A + +G VD++ +L V G++L I D E HV +
Sbjct: 172 HRLIHMNPRAEIMPVNFGEVDLNKILSVSGFNLNEILEIDPEFLKEEEHDHDHHDHVCDE 231
Query: 163 HCATHHHESAHGHHEGHHHNHMH------DSAVSSVTIVSEGTLDLDEVDDWLERLIEEK 216
HC H + H+ H +H + A+ + SE D ++D++L L++
Sbjct: 232 HCHHEHGDGHQHGHQHDHDHHHDHHHSHHNDAIKAFVYTSEKPFDPVKLDEFLSGLVQVY 291
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
G D+YR KGI+ + G+ +++ QGVH L PG+ WG +K+ +K+VFIG+NL
Sbjct: 292 GPDMYRYKGIIYIKGAPVKFLLQGVHMVLGTNPGQPWGTAKKQ-SKIVFIGKNLPHDVFT 350
Query: 277 KGFKGCLA 284
+G CLA
Sbjct: 351 EGLNQCLA 358
>gi|170693979|ref|ZP_02885135.1| cobalamin synthesis protein P47K [Burkholderia graminis C4D1M]
gi|170141051|gb|EDT09223.1| cobalamin synthesis protein P47K [Burkholderia graminis C4D1M]
Length = 370
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 114/319 (35%), Positives = 170/319 (53%), Gaps = 43/319 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL ++L LA +KQ FD +VIETTGLA P PV +TF D+ ++
Sbjct: 59 MSNGCICCTIRGDLSRVLGDLAAQKQSGKLDFDRVVIETTGLANPGPVAQTFFMDDQIAS 118
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD +ITLVD+KHA L+E +E V+ QV +ADR+ + K DLV E +LG L
Sbjct: 119 EFLLDAIITLVDAKHANHQLDE-------HEVVQRQVGFADRLFITKADLVDEAQLGDLR 171
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEVHVDNSHCATHHHES--- 171
R+ H+N A +K+ +G D+ + + G++L ID + V++ H H H
Sbjct: 172 HRLLHMNPKAAIKVVNFGDADIKEIFDLRGFNLNSKLEIDPDFLVEDEHAHNHAHAHDEH 231
Query: 172 -------------------AHGHHEGHH-------HNHMHDSAVSSVTIVSEGTLDLDEV 205
H HEGH H+ HD + S ++ D +++
Sbjct: 232 GHTHGHDHDHDHANCDHDHGHCDHEGHEGHDHAHRHHAHHDDKIKSFVYRNDRPFDPNKL 291
Query: 206 DDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVF 265
+D+L +++ GE L R KG+L + G +++ VFQGVH + W P EK+ NK+VF
Sbjct: 292 EDFLGGILQIYGERLLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWQPAEKKTNKMVF 351
Query: 266 IGRNLDETALRKGFKGCLA 284
IG L + + G CLA
Sbjct: 352 IGIELPQDLITDGLDACLA 370
>gi|356494965|ref|XP_003516351.1| PREDICTED: COBW domain-containing protein 1-like [Glycine max]
Length = 365
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/282 (37%), Positives = 154/282 (54%), Gaps = 19/282 (6%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CCTV+ LV+ L QL ++K+ + DHI++ETTGLA PAP+ DE + VKLD
Sbjct: 93 NGCICCTVKHSLVQALEQLVQRKE-RLDHILLETTGLANPAPLASVLWLDEQLESEVKLD 151
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE---RI 120
++T+VD+K+ L+E + EA Q+A+AD IILNK+DLV+ G+L E I
Sbjct: 152 SIVTVVDAKNLRFQLDEHRGSSSFPEAYFQIAFADIIILNKVDLVSVESSGALEELEVEI 211
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
+IN++A + + VD+ +L YD R E+
Sbjct: 212 HNINSLAEIIHSVRCQVDLSKILNRQAYDTAR-------------ATQLEALLEESRSLS 258
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDL--YRMKGILSVSGSEQQYVF 238
+HDS V ++ I ++LD+ WLE ++ EK D+ YR KG+LSV S+Q +
Sbjct: 259 TKKLHDSDVRTICICETRMINLDKTRIWLEEILWEKKYDMDVYRCKGVLSVQNSDQLHTL 318
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
Q V + P + W +EKRINK+VFIG NL E L F+
Sbjct: 319 QAVKELYEIVPSRKWEKEEKRINKIVFIGHNLKEDILINSFR 360
>gi|408788946|ref|ZP_11200659.1| cobalamin synthesis protein [Rhizobium lupini HPC(L)]
gi|408485225|gb|EKJ93566.1| cobalamin synthesis protein [Rhizobium lupini HPC(L)]
Length = 372
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 172/313 (54%), Gaps = 38/313 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 66 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLV+ E+ + + ++
Sbjct: 125 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVVVNKTDLVSPEEVARIEDIVR 178
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHV-----DNSHCATHHHESAHGH 175
IN A + VD+ VL G ++LER ++++ H D+ C H H
Sbjct: 179 AINPSARIYKTTRSGVDLARVLDQGAFNLERALENDPHFLEHGHDDHVCGPDCDHHHHDH 238
Query: 176 HEGHHH------------------------NHMHDSAVSSVTIVSEGTLDLDEVDDWLER 211
HHH + +HD V SV++ G ++ + W+++
Sbjct: 239 DHDHHHHDHDHGHHHHDHDHGHDHHHHGAVSPIHDVTVQSVSLRG-GEMNPERFFPWIQK 297
Query: 212 LIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLD 271
+ + G ++ R+KGI++ G ++YV QGVH ++G + W DEKR ++LVFIGR LD
Sbjct: 298 VTQTDGPNILRLKGIIAFKGDAERYVVQGVHMIIEGDHQRPWKEDEKRESRLVFIGRELD 357
Query: 272 ETALRKGFKGCLA 284
L K F CLA
Sbjct: 358 REKLEKSFNACLA 370
>gi|187476660|ref|YP_784683.1| hypothetical protein BAV0145 [Bordetella avium 197N]
gi|115421246|emb|CAJ47751.1| conserved hypothetical protein [Bordetella avium 197N]
Length = 365
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 107/305 (35%), Positives = 170/305 (55%), Gaps = 32/305 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCTVRGDL++ L +L K++ GQ F+ ++IETTG+A P PV +TF D+ ++
Sbjct: 68 LSNGCVCCTVRGDLMRTLNELRVKREAGQLSFERVIIETTGMANPGPVCQTFFMDDDIAD 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
Y +LD V+T+VD+KH M L+ + EA +QV +ADRI+++K DLV + + +L
Sbjct: 128 YYRLDAVVTVVDAKHGMATLDAQE------EAQKQVGFADRILVSKRDLVNDADYEALRA 181
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHE-------- 170
R+ IN AP+ +G V++ ++ + G++L I + +D A H +
Sbjct: 182 RLLRINPRAPITPVHFGEVELKSIIDISGFNLNSI---LDIDPDFLADEHPDAKHAHDHD 238
Query: 171 ------------SAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGE 218
AH H HHH+H H+ + + S D ++++L +++ G
Sbjct: 239 HDHHDHEHAGECGAHCDHAHHHHHHQHNDEIGAFVFRSNKPFDPARLEEFLGGVVQVYGP 298
Query: 219 DLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKG 278
DL R KGIL + G ++ +FQGVH + PGK W EK K+VFIGR L + +G
Sbjct: 299 DLMRYKGILYMKGINRRMLFQGVHMMMGAEPGKPWTAAEKPSTKMVFIGRKLPQEIFTRG 358
Query: 279 FKGCL 283
+ CL
Sbjct: 359 LEQCL 363
>gi|15966623|ref|NP_386976.1| hypothetical protein SMc02978 [Sinorhizobium meliloti 1021]
gi|15075895|emb|CAC47449.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
Length = 368
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 172/307 (56%), Gaps = 34/307 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 66 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDAIIVETTGLADPVPVAQTFFMDDDVRAKTE 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD ++LNK DLVT EL + ++
Sbjct: 125 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLLNKTDLVTPEELERVEATVR 178
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER--------IDSEVH--VDNSHCATHHHES 171
IN A + + +D+ VL G ++L+R +D E H V C HH
Sbjct: 179 VINPSARIYRTQRSEIDLGKVLDRGAFNLDRALENDPHFLDQEDHDHVCGPDCDHDHHHH 238
Query: 172 AHGHHEGHHH----------------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEE 215
H HH+ H + +HD V S+++ G ++ D W++++ +
Sbjct: 239 DHHHHDHDHDHDHDHDHHHHHHHDGPSPIHDVTVQSISLRG-GEMNPDRFFPWIQKITQT 297
Query: 216 KGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETAL 275
G ++ R+KGI++ +G ++YV QGVH ++G + W EKR ++LVFIGR+LD +
Sbjct: 298 DGPNILRLKGIIAFAGDAERYVVQGVHMIIEGDHQRPWKDGEKRESRLVFIGRDLDREKI 357
Query: 276 RKGFKGC 282
+ FK C
Sbjct: 358 ERTFKAC 364
>gi|427399732|ref|ZP_18890970.1| hypothetical protein HMPREF9710_00566 [Massilia timonae CCUG 45783]
gi|425721009|gb|EKU83923.1| hypothetical protein HMPREF9710_00566 [Massilia timonae CCUG 45783]
Length = 352
Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 106/300 (35%), Positives = 161/300 (53%), Gaps = 27/300 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCTVRGDL+ L LA+K+ FD +VIETTGLA P PV +TF DE V
Sbjct: 61 MNNGCICCTVRGDLIVALTNLAQKRAAGEISFDRVVIETTGLANPGPVAQTFFVDEEVGA 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD V+T+VD++HAM L + + EA QV +AD+I+L+K DLV + +L
Sbjct: 121 NYLLDAVVTVVDARHAMDQLTQNE------EAQRQVGFADKILLSKTDLVDAAAVETLKA 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHH---------- 168
R+ IN AP+ + +G + VL + G++L + ++ +D
Sbjct: 175 RLHRINPRAPIATSDFGRAPISDVLDLRGFNL---NDKLELDPDFLKVEEAHDHDHDHDH 231
Query: 169 ----HESAHGHH-EGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRM 223
H+ AHG HH+ H +++ SE D + ++ +L L++ G + R
Sbjct: 232 AHCGHDHAHGEACNHDHHHGHHTDDIAAFVFKSERAFDPERLEQFLGSLVQVFGPQMLRY 291
Query: 224 KGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
KG+L + G +++ VFQGVH + G WG +E K+VFIG+NL + +G + CL
Sbjct: 292 KGVLRMEGVDRKVVFQGVHQIMGSDVGPKWGENETPATKMVFIGKNLPKDVFVRGLEQCL 351
>gi|410694380|ref|YP_003625002.1| putative cobalamin synthesis protein CobW [Thiomonas sp. 3As]
gi|294340805|emb|CAZ89200.1| putative cobalamin synthesis protein CobW [Thiomonas sp. 3As]
Length = 353
Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 111/300 (37%), Positives = 172/300 (57%), Gaps = 28/300 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTD-ELVS 57
++NGC+CCT+R DL L LA K+++G+ FD +VIETTG+A P PV +TF D E+ S
Sbjct: 62 MSNGCICCTIRDDLRATLADLAAKRRKGELVFDRVVIETTGIADPGPVAQTFFMDDEVAS 121
Query: 58 QYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLT 117
QY+ LD ++TLVD+KHA Q L+ + EA QV +AD+I ++K DLV+ EL +L
Sbjct: 122 QYM-LDAILTLVDAKHANQQLDSRQ------EARRQVGFADQIFISKADLVSADELAALQ 174
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESA----- 172
R+ H+N A + +G V + VL + G++L ++++ +D H+
Sbjct: 175 HRLAHMNPRAKQSVVHFGEVPLSQVLDLKGFNL---NAKLDIDPDFLKADDHDHHDHDHD 231
Query: 173 ---------HGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRM 223
HG H H H+H HD V S ++ D +++D+L +++ G + R
Sbjct: 232 HDHHDHDHEHGEHCNHPHHHHHDDDVKSFVYRADKPFDPAKLEDFLGAIVQVYGPRMLRY 291
Query: 224 KGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
KG+L++ G +++ VFQGVH + WGP E+R +K+VFIG +L L KG + CL
Sbjct: 292 KGVLNMQGIDRKVVFQGVHQLMGSDLAAPWGPQEQRQSKMVFIGIDLPRDILEKGLQQCL 351
>gi|224101437|ref|XP_002312279.1| predicted protein [Populus trichocarpa]
gi|222852099|gb|EEE89646.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 156/286 (54%), Gaps = 20/286 (6%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CCTV+ LV+ L QL + K+ + DHI++ETTGLA PAP+ D+ + VKLD
Sbjct: 101 NGCVCCTVKHSLVQALEQLVQMKE-RLDHILLETTGLANPAPLASVLWLDDQLESAVKLD 159
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLV----TETELGSLTER 119
+IT+VD+K+ LNE++ EA Q+A+AD IILNK+DLV + L L
Sbjct: 160 SIITVVDAKNLHYQLNELQNSSSFPEASLQIAFADVIILNKVDLVSLGGSGEALKELENE 219
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGH 179
I IN++A + + VD+ +L YD + H E +
Sbjct: 220 IHKINSLANIIHSVRCQVDLSKILNCRAYDSKHFG-------------HLEVLLEESKSL 266
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK--GEDLYRMKGILSVSGSEQQYV 237
+ +HDS++ ++ I +DLD+V WLE ++ +K G D+YR KG+L V S++ +
Sbjct: 267 STSDLHDSSLRTLCICESQKVDLDKVRLWLEEILWDKKDGMDVYRCKGVLYVRNSDELHT 326
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
Q V D P + W DE +INK+VFIG NL E L F+ C+
Sbjct: 327 LQAVRELYDIVPARKWRSDENQINKIVFIGHNLKEDVLINSFRDCI 372
>gi|420245292|ref|ZP_14748934.1| putative GTPase, G3E family [Rhizobium sp. CF080]
gi|398047756|gb|EJL40264.1| putative GTPase, G3E family [Rhizobium sp. CF080]
Length = 376
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 172/311 (55%), Gaps = 38/311 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 70 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 128
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL + + ++
Sbjct: 129 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVVINKTDLVTPEELAIIEDVVR 182
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVH-VDNSH----CATH-------- 167
IN A V VD+ VL G ++LER ++++ H +D H C
Sbjct: 183 AINPTARVYKTSRSGVDLARVLDQGAFNLERALENDPHFLDQGHDDHVCGPDCDHDHGHD 242
Query: 168 ----------------HHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLER 211
HH H HH + +HD V S+++ G ++ + W+++
Sbjct: 243 HHHHDHDHHAHDHDHDHHGHDHHHHHHGEMSPIHDVTVKSISLRG-GEMNPERFFPWIQK 301
Query: 212 LIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLD 271
+ + G + R+KGI++ G E++YV QGVH ++G + W EKR ++LVFIGR+LD
Sbjct: 302 ITQTDGPSILRLKGIIAFKGDEERYVVQGVHMIVEGDHQRPWKDGEKRESRLVFIGRDLD 361
Query: 272 ETALRKGFKGC 282
+ K F+ C
Sbjct: 362 VDKIEKSFRAC 372
>gi|399116721|emb|CCG19529.1| putative uncharacterized protein [Taylorella asinigenitalis 14/45]
Length = 362
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 169/308 (54%), Gaps = 34/308 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKK---KQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CC+VR DL LL L + + F+ ++IETTG+A P P+ +TF ++ V+
Sbjct: 64 LNNGCICCSVRVDLENTLLDLKARLDSGESNFERVIIETTGVANPGPICQTFFLNDEVAA 123
Query: 59 YVKLDGVITLVDSKHAMQHL-NEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLT 117
+ +LD VIT+VD+KH M L NE+ EA QV +ADRI+++K+DLV+E E L
Sbjct: 124 FYRLDAVITIVDAKHGMDTLTNEI-------EAQTQVGFADRILISKVDLVSEEEYEDLR 176
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHG--- 174
R+ H+N A + +G VD+ +L V G++L I E+ + C HE H
Sbjct: 177 HRLVHMNPRAEIMPVNFGEVDLKKILSVSGFNLNEI-LEIDPEFLKCEDDEHEHDHECGE 235
Query: 175 ------------------HHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK 216
HH HH+ H+ A+ + S+ D +D++L L++
Sbjct: 236 HCHHDHDHEHGHEHDHHHHHHHDHHHSHHNDAIKAFVYTSDKPFDPVRLDEFLSGLVQVY 295
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
G D+YR KGI+ + G+ +++ QGVH L PG+ WG +K+ +K+VFIG+NL
Sbjct: 296 GPDMYRYKGIIYIKGAPVKFLLQGVHMVLGTNPGQPWGSSKKQ-SKIVFIGKNLPHDVFT 354
Query: 277 KGFKGCLA 284
+G CLA
Sbjct: 355 EGLNQCLA 362
>gi|225423525|ref|XP_002274691.1| PREDICTED: COBW domain-containing protein 1-like [Vitis vinifera]
Length = 368
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/289 (36%), Positives = 160/289 (55%), Gaps = 24/289 (8%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CCTV+ LV+ L QL + K+ + DHI++ETTGLA PAP+ D+ + V+LD
Sbjct: 93 NGCICCTVKHSLVQALEQLVQMKE-RLDHILLETTGLANPAPLASVLWLDDQLESSVRLD 151
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE----R 119
+IT+VD+K+ LN EA Q+A+AD +ILNK+DLV+ E G + E
Sbjct: 152 SIITVVDAKNLRFQLNSHHGSSSFPEAFLQIAFADVVILNKVDLVSPEESGGVLEELEKE 211
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATH--HHESAHGHHE 177
I +IN++A + + VD+ +L YD ATH H E+ ++
Sbjct: 212 IHNINSLANIIHSVRCQVDLSKILDCRAYD---------------ATHATHLEALLEENQ 256
Query: 178 GHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK--GEDLYRMKGILSVSGSEQQ 235
+HDS V ++ I +DLD+V WLE ++ +K D+YR KG+L V S+Q
Sbjct: 257 SLSSKDLHDSNVRTLCISEPLPVDLDKVRLWLEEILWDKKYSMDVYRCKGVLRVLDSDQL 316
Query: 236 YVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+ Q V + P + W +E ++NK+VFIG NL+E AL F+ C++
Sbjct: 317 HTLQAVREIYEIVPTRKWKNEENQMNKIVFIGHNLNEDALTNSFRACMS 365
>gi|424886060|ref|ZP_18309671.1| putative GTPase, G3E family [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393177822|gb|EJC77863.1| putative GTPase, G3E family [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 367
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 170/308 (55%), Gaps = 34/308 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 67 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI LVD+KH L + + EA +Q+A+AD +++NK DLVT EL + + ++
Sbjct: 126 LDAVIALVDAKHLPLRLKDSR------EAEDQIAFADVVVINKSDLVTPEELDVIDDIVR 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHV-----DNSHCAT--------- 166
IN A V VD+ VL G ++LER ++++ H D+ C
Sbjct: 180 AINPAARVYKTSRSGVDLARVLDQGAFNLERALENDPHFLEHGHDDHVCGPDCDHDHHDH 239
Query: 167 ----------HHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK 216
H H H +G + +HD V SV++ G ++ + W++++ + +
Sbjct: 240 DHDHHHDHHGHDHHHHGAHQQGAM-SAIHDVTVQSVSLRG-GQMNPERFFPWIQKVTQTQ 297
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
G ++ R+KGI++ ++YV QGVH ++G + W EK ++LVFIGR+LD L
Sbjct: 298 GPNILRLKGIIAFKDDPERYVVQGVHMIIEGDHQRPWKEGEKHESRLVFIGRDLDREKLE 357
Query: 277 KGFKGCLA 284
FK C A
Sbjct: 358 ASFKACEA 365
>gi|120609501|ref|YP_969179.1| cobalamin synthesis protein, P47K [Acidovorax citrulli AAC00-1]
gi|120587965|gb|ABM31405.1| cobalamin synthesis protein, P47K [Acidovorax citrulli AAC00-1]
Length = 359
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/308 (36%), Positives = 172/308 (55%), Gaps = 34/308 (11%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQG--QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DL + L L AK+++G FD +VIETTGLA P PV +TF DE +++
Sbjct: 61 MSNGCICCTIREDLRETLQLLAAKRRKGLLDFDRVVIETTGLADPGPVAQTFFMDEEIAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+D +ITLVD+KHA Q LN+ + EA QV +AD+I L+K DLV E +L
Sbjct: 121 TYLIDSIITLVDAKHAAQQLNDRQ------EARRQVGFADQIFLSKTDLVPAEETDALIH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHES------- 171
R+KH+N AP+K +G V + VL + G++L ++++ +D
Sbjct: 175 RLKHMNPRAPIKAVHFGEVPVAEVLDLRGFNL---NAKLDIDPDFLKEEDDHGHDHDHGH 231
Query: 172 -------------AHGHHE--GHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK 216
+H H+ GH H+H HD V S ++ D +++D+L ++
Sbjct: 232 DHHGHDHEHGEHCSHPSHQHGGHGHHHHHDDDVKSFVYRADRPFDPAKLEDFLGAIVNIY 291
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
G + R KG+L + G+E++ +FQGVH + G W DEKR +K+VFIG L + +
Sbjct: 292 GPRMLRYKGVLHMKGTERKVIFQGVHQLMGSDLGPQWAEDEKRQSKMVFIGIELPQDIFQ 351
Query: 277 KGFKGCLA 284
+G + CLA
Sbjct: 352 QGLEQCLA 359
>gi|218897024|ref|YP_002445435.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
G9842]
gi|218545178|gb|ACK97572.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
G9842]
Length = 316
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 163/285 (57%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E+E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEESEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
I+ IN A + A VD+ +L + + T + H E
Sbjct: 172 EIQGINPTAKLIEATNCEVDIPSLLQIQTF----------------KTKDTLRIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ +K F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQKHFQECV 315
>gi|332717165|ref|YP_004444631.1| cobalamin synthesis protein [Agrobacterium sp. H13-3]
gi|418408723|ref|ZP_12982037.1| cobalamin synthesis protein [Agrobacterium tumefaciens 5A]
gi|325063850|gb|ADY67540.1| cobalamin synthesis protein [Agrobacterium sp. H13-3]
gi|358004739|gb|EHJ97066.1| cobalamin synthesis protein [Agrobacterium tumefaciens 5A]
Length = 374
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 167/319 (52%), Gaps = 48/319 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 66 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +I+NK DLV+ E+ + + ++
Sbjct: 125 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVIVNKTDLVSPEEVARIEDIVR 178
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHES---------- 171
IN A + VD+ VL G ++LER ++ H H HE
Sbjct: 179 AINPSARIYKTTRSGVDLARVLDQGAFNLER----ALENDPHFLEHGHEDHACGPDCDHH 234
Query: 172 --------------------------AHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEV 205
H HH + +HD V SV++ G ++ +
Sbjct: 235 HHDHGHDHGHDHHHHDHDHAHHDHDHGHDHHHHGAASPIHDVTVQSVSLRG-GEMNPERF 293
Query: 206 DDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVF 265
W++++ + G ++ R+KGI++ G ++YV QGVH ++G + W EKR ++LVF
Sbjct: 294 FPWIQKVTQTDGPNILRLKGIIAFKGDAERYVVQGVHMIIEGDHQRPWKEGEKRESRLVF 353
Query: 266 IGRNLDETALRKGFKGCLA 284
IGR LD L K F CLA
Sbjct: 354 IGRELDREKLEKSFNACLA 372
>gi|424779039|ref|ZP_18205972.1| hypothetical protein C660_19327 [Alcaligenes sp. HPC1271]
gi|422886061|gb|EKU28492.1| hypothetical protein C660_19327 [Alcaligenes sp. HPC1271]
Length = 366
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 168/307 (54%), Gaps = 34/307 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCTVRGDL++ L L ++Q +F+ ++IETTG+A P PV +TF D+ ++
Sbjct: 68 LSNGCVCCTVRGDLMRTLNDLRVRRQAGELKFERVIIETTGMANPGPVCQTFFMDDDIAD 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
Y +LD VIT+VD+KH M L++ + EA +QV +ADR++++K DLV + + +L
Sbjct: 128 YYRLDAVITVVDAKHGMATLDQQE------EAQKQVGFADRLLISKKDLVNDVDYEALRA 181
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHH---------- 168
R+ IN A + +G D+ +L V G++L I + +D A H
Sbjct: 182 RLIRINPRATITPVHFGETDIKDLLEVSGFNLNSI---LDIDPQFLAEQHPDAADGHDHH 238
Query: 169 ------HESAHGHHEGHHHNHMH------DSAVSSVTIVSEGTLDLDEVDDWLERLIEEK 216
E G GH H+H H + + + S+ D + ++D+L +++
Sbjct: 239 HDHAHGDEGECGPGCGHDHHHHHHEHAAHNDEIGAFVFRSDRPFDPERLEDFLSGIVQVF 298
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
G DL R KGIL + G ++ +FQGVH + PG AW +K+ KLVFIGR L +
Sbjct: 299 GPDLMRYKGILYLKGINRRMLFQGVHMMMSAEPGNAWLAKDKKGTKLVFIGRKLPQDIFT 358
Query: 277 KGFKGCL 283
+G + CL
Sbjct: 359 QGLENCL 365
>gi|388568727|ref|ZP_10155138.1| cobalamin synthesis protein P47K [Hydrogenophaga sp. PBC]
gi|388263981|gb|EIK89560.1| cobalamin synthesis protein P47K [Hydrogenophaga sp. PBC]
Length = 362
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/310 (35%), Positives = 174/310 (56%), Gaps = 37/310 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DL L LA+KK+ FD +VIETTGLA P PV +TF D+ V++
Sbjct: 61 MSNGCICCTIRDDLRATLADLAQKKRKGELDFDRVVIETTGLADPGPVAQTFFMDDEVAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD ++TLVD+KHA LN+ + EA QV +AD+I ++K DLV+ E+ +LT
Sbjct: 121 QYLLDAIVTLVDAKHAADQLNDRQ------EARRQVGFADQIFISKADLVSPQEVDALTH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHE-------- 170
R+KH+N A ++ A +G V + V + G++L ++++ +D H+
Sbjct: 175 RLKHMNPRAAMRPAHFGEVAIKEVFDLRGFNL---NAKLEIDPDFLKADDHDHDHGHEHD 231
Query: 171 -----------------SAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLI 213
+H H GH H+H HD V S ++ ++++D+L ++
Sbjct: 232 GHDHHDHDHAHGEHCDHPSHQHGHGHGHHHHHDDDVKSFVYRADRPFSPEKLEDFLGAIV 291
Query: 214 EEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDET 273
+ G + R KG+L + G+E++ +FQGVH + G WGPDEKR++K+VFIG +L
Sbjct: 292 QVYGPRMLRYKGVLHMQGTERKVIFQGVHQLMGSDLGPEWGPDEKRMSKMVFIGIDLPRD 351
Query: 274 ALRKGFKGCL 283
L +G + L
Sbjct: 352 ILEQGLEQSL 361
>gi|393760176|ref|ZP_10348988.1| hypothetical protein QWA_13667 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393161988|gb|EJC62050.1| hypothetical protein QWA_13667 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 366
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 166/307 (54%), Gaps = 34/307 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCTVRGDL++ L L +++ +F+ ++IETTG+A P PV +TF D+ ++
Sbjct: 68 LSNGCVCCTVRGDLMRTLNDLRVRREAGELKFERVIIETTGMANPGPVCQTFFMDDDIAD 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
Y +LD VIT+VD+KH M L++ + EA +QV +ADR++++K DLV + E +L
Sbjct: 128 YYRLDAVITVVDAKHGMATLDQQE------EAQKQVGFADRLLISKKDLVNDAEYEALRA 181
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHH---------H 169
R+ IN A + +G D+ +L V G++L I + +D A H H
Sbjct: 182 RLIRINPRATITPVHFGETDIKDLLEVSGFNLNSI---LDIDPQFLAEQHPDAADDHDHH 238
Query: 170 ESAHGHHEGH-------------HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK 216
EG H + H+ + + S+ D + ++D+L +++
Sbjct: 239 HDHAHGDEGECGPGCGHDHHHHHHGHAAHNDEIGAFVFRSDRPFDPERLEDFLSGIVQVF 298
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
G DL R KGIL + G ++ +FQGVH + PG AW +K+ KLVFIGR L +
Sbjct: 299 GPDLMRYKGILYLKGINRRMLFQGVHMMMSAEPGNAWLAKDKKGTKLVFIGRKLPQDIFT 358
Query: 277 KGFKGCL 283
+G + CL
Sbjct: 359 QGLENCL 365
>gi|386397038|ref|ZP_10081816.1| putative GTPase, G3E family [Bradyrhizobium sp. WSM1253]
gi|385737664|gb|EIG57860.1| putative GTPase, G3E family [Bradyrhizobium sp. WSM1253]
Length = 332
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 149/275 (54%), Gaps = 20/275 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVR DLV + +L + I+IETTGLA PAP+I++F DE +S
Sbjct: 63 INNGCICCTVRTDLVTTITKLLSGTR-PIRRILIETTGLADPAPIIQSFVVDETLSAATT 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+ H + L + N A EQ+A+AD +++K+DLV E L + I+
Sbjct: 122 LDAVVTVVDATHIDRWLADQSAGE--NVAAEQIAFADIAVISKLDLVGEGCLAKVEATIR 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN M V + G + ++ V +DL+ +C T
Sbjct: 180 AINPMVRVVTSVEGRANAASIIDVKAFDLK-----------NCLTIEPLLLS------DL 222
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
H HD +V SV + E LD WL +++ GE L R KGILS++ +++VF GV
Sbjct: 223 EHEHDLSVISVEVREERPLDGPRFFRWLNGFVQKNGEGLLRCKGILSLASEPRRWVFHGV 282
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
H TLDG PG+ W P+E R + +VFIGR L+ +R
Sbjct: 283 HMTLDGRPGRPWAPNEPRTSAIVFIGRGLEAARIR 317
>gi|237748818|ref|ZP_04579298.1| GTPase [Oxalobacter formigenes OXCC13]
gi|229380180|gb|EEO30271.1| GTPase [Oxalobacter formigenes OXCC13]
Length = 341
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 172/290 (59%), Gaps = 18/290 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DLV L LA K+K G+ FD +VIETTGLA P PV +TF ++ V+
Sbjct: 62 MSNGCICCTIRSDLVTALGTLANKRKSGELNFDRVVIETTGLADPGPVAQTFFIEDSVAS 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+DG++TL+D+ AMQ L+E + +A +QV YADR++++K DLV++ ++ L
Sbjct: 122 EYMIDGIVTLMDAVFAMQQLDEYE------QARQQVGYADRLLISKTDLVSDEDVEILCH 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
RI+HIN AP+ +G VD+ VL V G++L S++ +D A H H H H G
Sbjct: 176 RIRHINPHAPIHTVDFGRVDVAEVLDVHGFNLS---SKLDIDEGGHAHHDHSHDHHHECG 232
Query: 179 H----HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQ 234
H H+H+ D ++S S+ D + ++D+ +R+I G + R KG+L + +++
Sbjct: 233 HDCACSHHHLDD--INSFVFHSKKPFDPNRLNDFFDRMITLYGTQMLRYKGVLYMKDADR 290
Query: 235 QYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+ VFQGV + + W + +KLVFIG+NL +T +G LA
Sbjct: 291 KVVFQGVQQLMGTDIVEKWDENHPPESKLVFIGKNLPKTIFMEGLHDSLA 340
>gi|397583181|gb|EJK52544.1| hypothetical protein THAOC_28167 [Thalassiosira oceanica]
Length = 754
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/278 (38%), Positives = 158/278 (56%), Gaps = 27/278 (9%)
Query: 11 VRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFC----TDELVSQYVKLDGVI 66
VRGDLV L +L KK FD ++IETTGLA PAPV++TF +D + + KLD +I
Sbjct: 315 VRGDLVDALNRLYKKVD-TFDGVIIETTGLADPAPVVQTFFAEVNSDSTLEEKYKLDAII 373
Query: 67 TLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLV-TETELGSLTERIKHINA 125
T+VD+K+ +Q L+E K EA +QV AD+IILNK+DLV + E + +R++ +N
Sbjct: 374 TVVDAKYIIQRLDETK----GTEAEQQVCMADKIILNKMDLVQNDGEADDIEDRLRSLNP 429
Query: 126 MAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHHNHMH 185
AP+ + +L VG +DLE++ + +D G H
Sbjct: 430 TAPIFRCSESKISPKELLNVGSFDLEKV---LEIDPFFL-------------GEAKQPKH 473
Query: 186 DSAVSSVTIVSEGTLDLDEVDDWLERLIEE-KGEDLYRMKGILSVSGSEQQYVFQGVHST 244
D+AVSS++ +G ++ ++ W+ RL+++ G+ LYR KGI S+ G +++ VFQGV
Sbjct: 474 DNAVSSISAKYDGNVNRTLLEVWIRRLLKDYSGDQLYRYKGICSIQGQDERMVFQGVGHF 533
Query: 245 LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
+ G W EKR + VFIGRNLD LR GF+ C
Sbjct: 534 FNSTYGAPWKDGEKRESTFVFIGRNLDTDTLRDGFEAC 571
>gi|297738062|emb|CBI27263.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/289 (36%), Positives = 160/289 (55%), Gaps = 24/289 (8%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CCTV+ LV+ L QL + K+ + DHI++ETTGLA PAP+ D+ + V+LD
Sbjct: 93 NGCICCTVKHSLVQALEQLVQMKE-RLDHILLETTGLANPAPLASVLWLDDQLESSVRLD 151
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE----R 119
+IT+VD+K+ LN EA Q+A+AD +ILNK+DLV+ E G + E
Sbjct: 152 SIITVVDAKNLRFQLNSHHGSSSFPEAFLQIAFADVVILNKVDLVSPEESGGVLEELEKE 211
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATH--HHESAHGHHE 177
I +IN++A + + VD+ +L YD ATH H E+ ++
Sbjct: 212 IHNINSLANIIHSVRCQVDLSKILDCRAYD---------------ATHATHLEALLEENQ 256
Query: 178 GHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK--GEDLYRMKGILSVSGSEQQ 235
+HDS V ++ I +DLD+V WLE ++ +K D+YR KG+L V S+Q
Sbjct: 257 SLSSKDLHDSNVRTLCISEPLPVDLDKVRLWLEEILWDKKYSMDVYRCKGVLRVLDSDQL 316
Query: 236 YVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+ Q V + P + W +E ++NK+VFIG NL+E AL F+ C++
Sbjct: 317 HTLQAVREIYEIVPTRKWKNEENQMNKIVFIGHNLNEDALTNSFRACMS 365
>gi|451812532|ref|YP_007448986.1| G3E family GTPase [Candidatus Kinetoplastibacterium galatii TCC219]
gi|451778434|gb|AGF49382.1| G3E family GTPase [Candidatus Kinetoplastibacterium galatii TCC219]
Length = 352
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 159/288 (55%), Gaps = 27/288 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKK---KQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDLVK LL L K K +FDHI+IETTG+A P PV +TF D V+
Sbjct: 80 LSNGCICCTIRGDLVKTLLDLKMKQLNKLLKFDHIIIETTGIANPGPVCQTFFIDNDVAD 139
Query: 59 YVKLDGVITLVDSKHAMQHL-NEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLT 117
Y +LD V+ LVD+KH + L N++ EA +QV +AD+I+++K DLV++ E+ L
Sbjct: 140 YYRLDSVVALVDAKHGIDTLKNQI-------EAQKQVGFADKILVSKSDLVSDDEINLLR 192
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEVHVDNSHCATHHHESAHG 174
+ + IN +P+K +G +D D +L + G++L IDSE H +
Sbjct: 193 KYLIRINPKSPIKNINFGDIDTDDILHINGFNLNDALDIDSEFLKQEEHICS-------- 244
Query: 175 HHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQ 234
E HH HD+ ++S T +S + +++ L L E+ G D+ R KGIL + + +
Sbjct: 245 --EKCHH---HDNEINSFTFLSNKPFNSKKLEMVLGELTEKYGPDMLRYKGILYMDDTNR 299
Query: 235 QYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
+ + QGVH + G W +K K+VFIG L + C
Sbjct: 300 RVILQGVHMLIGAEQGNEWEFTQKPNTKIVFIGHRLPKNLFINKLNEC 347
>gi|302831279|ref|XP_002947205.1| hypothetical protein VOLCADRAFT_103294 [Volvox carteri f.
nagariensis]
gi|300267612|gb|EFJ51795.1| hypothetical protein VOLCADRAFT_103294 [Volvox carteri f.
nagariensis]
Length = 410
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/152 (57%), Positives = 116/152 (76%), Gaps = 1/152 (0%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L +L K+K G+FD I+IETTGLA PAPVI+TF DE +
Sbjct: 65 MNNGCVCCTVRGDLIRILNKLIKRK-GKFDAIMIETTGLANPAPVIQTFFVDENIKDACV 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+KH MQHLN+VKP VVNEAV+QVA+AD+I+LNK DLV+ EL + ERIK
Sbjct: 124 LDAVLTVVDAKHVMQHLNDVKPDGVVNEAVQQVAFADKILLNKTDLVSAEELEDVKERIK 183
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERI 153
HIN V ++ +VD+ +LG+ + LER+
Sbjct: 184 HINKPVEVIECQHSAVDVSRLLGINAFSLERL 215
>gi|229161032|ref|ZP_04289020.1| Cobalamin synthesis protein [Bacillus cereus R309803]
gi|228622391|gb|EEK79229.1| Cobalamin synthesis protein [Bacillus cereus R309803]
Length = 316
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 164/285 (57%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DLV E+E +L +
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLVNESEKENLLQ 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + A VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIEATNCDVDIPSLLQIQTF----------------KTKDTLQIYPHTE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL +++DW+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHLE--GVKSFVLREERPLDLQKLNDWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIG+++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGKDINKEWFQEHFEECV 315
>gi|423014626|ref|ZP_17005347.1| CobW/HypB/UreG, nucleotide-binding domain-containing protein 5
[Achromobacter xylosoxidans AXX-A]
gi|338782242|gb|EGP46617.1| CobW/HypB/UreG, nucleotide-binding domain-containing protein 5
[Achromobacter xylosoxidans AXX-A]
Length = 376
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 168/317 (52%), Gaps = 43/317 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCTVRGDL++ L L K++ F+ +++ETTG+A P PV +TF D+ +++
Sbjct: 68 LSNGCVCCTVRGDLMRTLADLRAKREAGALNFERVILETTGMANPGPVCQTFFMDDDIAE 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
Y +LD V+T+VD++H M L+E +P EA +QV +ADRI+++K DLV + + +L
Sbjct: 128 YYRLDAVVTVVDAQHGMLTLDE-QP-----EAQKQVGFADRILISKKDLVNDVDYEALRN 181
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHES------- 171
R+ +N AP+ +G D+ ++ + G++L I + +D A H ++
Sbjct: 182 RLLRMNPRAPITAVNFGDADLKSIIDISGFNLNSI---LDIDPDFLADEHPDAAHSHAHG 238
Query: 172 ------------------------AHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDD 207
+ HHH+ HD + + S D +++
Sbjct: 239 HGHDHDHGHDHHGHDHDHDHDGDCGAHCNHAHHHHPKHDDEIGAFVFRSNKPFDPARLEE 298
Query: 208 WLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIG 267
+L +++ G DL R KGIL + G ++ +FQGVH + PGK W EK K+VFIG
Sbjct: 299 FLGGVVQVYGPDLLRYKGILYMKGINRRMLFQGVHMMMGAEPGKPWTAAEKPSTKMVFIG 358
Query: 268 RNLDETALRKGFKGCLA 284
R L + +G + CLA
Sbjct: 359 RKLPQEIFTRGLEQCLA 375
>gi|298704937|emb|CBJ28440.1| Cobalamin synthesis protein (ISS) [Ectocarpus siliculosus]
Length = 495
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/360 (31%), Positives = 175/360 (48%), Gaps = 93/360 (25%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
V NGC+CCTVRGDLV+ L +++KK FD ++IETTG+A PAPV +TF D+ V +
Sbjct: 73 VMNGCICCTVRGDLVEALKRMSKK-LSSFDAVLIETTGMADPAPVAQTFFVDDEVQSKYR 131
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLV------------- 108
LDG++T+VD+ H QHL+E KP V NE++EQ+A+AD IILNK DL+
Sbjct: 132 LDGIVTVVDAAHVEQHLDEEKPEDVENESIEQIAFADLIILNKTDLLCKKDEKPADAAAA 191
Query: 109 ---------------------------------TETELGSLTERIKHINAMAPVKLAKYG 135
E L L RI IN AP+ +++
Sbjct: 192 DGACNETDVPAPYGNNVMPPTDADAAKDASKTPAEEALAKLEARIHAINPNAPIIRSEFS 251
Query: 136 SVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIV 195
V +L + +DLER+ + +D E +H+HD ++SSV
Sbjct: 252 RVPPKKLLNLSAFDLERV---LEMDPEFL------------ESDGTDHVHDDSISSVAWS 296
Query: 196 SEG-TLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDG------- 247
G L+++ + ++ +L++E G +L+R KG+L+V G E+++VFQGVH G
Sbjct: 297 FPGLELNVNLLQLFISKLMQELGTELFRYKGVLAVKGMEEKFVFQGVHMLFSGGFASEAM 356
Query: 248 --------------------CPGKAWGPDEKRINKLVFIGRNLDET---ALRKGFKGCLA 284
P W D++R + +FIG+++ + L++ F C A
Sbjct: 357 GPESVNVDPKKEPNGDGKKATPPGLWASDDERECRFIFIGKHMKDKHADRLKQEFLACAA 416
>gi|423610407|ref|ZP_17586268.1| hypothetical protein IIM_01122 [Bacillus cereus VD107]
gi|401249724|gb|EJR56030.1| hypothetical protein IIM_01122 [Bacillus cereus VD107]
Length = 316
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 161/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKEDLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIPTTNCEVDIPSLLQIQTF----------------KTRDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEHLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W DEKR++++VFIG+++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEDEKRVSEVVFIGKDINKEWFQEHFQECV 315
>gi|423642917|ref|ZP_17618535.1| hypothetical protein IK9_02862 [Bacillus cereus VD166]
gi|401274921|gb|EJR80888.1| hypothetical protein IK9_02862 [Bacillus cereus VD166]
Length = 316
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 163/285 (57%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
+I+ IN A + A VD+ +L + + T + H E
Sbjct: 172 KIQGINPTAKLIEATNCEVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQEHFEECV 315
>gi|424912075|ref|ZP_18335452.1| putative GTPase, G3E family [Rhizobium leguminosarum bv. viciae
USDA 2370]
gi|392848106|gb|EJB00629.1| putative GTPase, G3E family [Rhizobium leguminosarum bv. viciae
USDA 2370]
Length = 377
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 171/318 (53%), Gaps = 43/318 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 66 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLV+ E+ + + ++
Sbjct: 125 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVVVNKTDLVSPEEVARIEDIVR 178
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHV-----DNSHCATHHHESAHGH 175
IN A + VD+ VL G ++LER ++++ H D+ C H H
Sbjct: 179 AINPSARIYKTTRSGVDLARVLDQGAFNLERALENDPHFLEHGHDDHVCGPDCDHHHHDH 238
Query: 176 HEGHHH-----------------------------NHMHDSAVSSVTIVSEGTLDLDEVD 206
HH + +HD V SV++ G ++ +
Sbjct: 239 DHHHHDHDHDHHDHDHGHHHHDHDHGHDHHHHGAVSPIHDVTVQSVSLRG-GEMNPERFF 297
Query: 207 DWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFI 266
W++++ + G ++ R+KGI++ G ++YV QGVH ++G + W DEKR ++LVFI
Sbjct: 298 PWIQKVTQTDGPNILRLKGIIAFKGDAERYVVQGVHMIIEGDHQRPWKEDEKRESRLVFI 357
Query: 267 GRNLDETALRKGFKGCLA 284
GR LD L K F CLA
Sbjct: 358 GRELDREKLEKSFNACLA 375
>gi|75759554|ref|ZP_00739643.1| Low-affinity zinc transport protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228900642|ref|ZP_04064862.1| Cobalamin synthesis protein [Bacillus thuringiensis IBL 4222]
gi|228907770|ref|ZP_04071624.1| Cobalamin synthesis protein [Bacillus thuringiensis IBL 200]
gi|228965038|ref|ZP_04126136.1| Cobalamin synthesis protein [Bacillus thuringiensis serovar sotto
str. T04001]
gi|402560744|ref|YP_006603468.1| zinc transporter [Bacillus thuringiensis HD-771]
gi|423362055|ref|ZP_17339557.1| hypothetical protein IC1_04034 [Bacillus cereus VD022]
gi|423563577|ref|ZP_17539853.1| hypothetical protein II5_02981 [Bacillus cereus MSX-A1]
gi|434374986|ref|YP_006609630.1| zinc transporter [Bacillus thuringiensis HD-789]
gi|74492985|gb|EAO56112.1| Low-affinity zinc transport protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228794653|gb|EEM42161.1| Cobalamin synthesis protein [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228851858|gb|EEM96658.1| Cobalamin synthesis protein [Bacillus thuringiensis IBL 200]
gi|228858987|gb|EEN03427.1| Cobalamin synthesis protein [Bacillus thuringiensis IBL 4222]
gi|401078946|gb|EJP87251.1| hypothetical protein IC1_04034 [Bacillus cereus VD022]
gi|401198637|gb|EJR05553.1| hypothetical protein II5_02981 [Bacillus cereus MSX-A1]
gi|401789396|gb|AFQ15435.1| zinc transporter [Bacillus thuringiensis HD-771]
gi|401873543|gb|AFQ25710.1| zinc transporter [Bacillus thuringiensis HD-789]
Length = 316
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 163/285 (57%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E+E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEESEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
I+ IN A + A VD+ +L + + T + H E
Sbjct: 172 EIQGINPTAKLIEATNCEVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQEHFQECV 315
>gi|423403385|ref|ZP_17380558.1| hypothetical protein ICW_03783 [Bacillus cereus BAG2X1-2]
gi|401648482|gb|EJS66077.1| hypothetical protein ICW_03783 [Bacillus cereus BAG2X1-2]
Length = 316
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 164/285 (57%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + +FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMEFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DLV E+E +L +
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLVDESEKENLLQ 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + A VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIEATNCDVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHLE--GVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W EKR++++VFIG+++++ ++ F C+
Sbjct: 271 QGVHTLFAASYDREWQEGEKRVSEVVFIGKDINKEWFQEHFGECV 315
>gi|326315556|ref|YP_004233228.1| cobalamin synthesis protein P47K [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323372392|gb|ADX44661.1| cobalamin synthesis protein P47K [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 359
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 169/308 (54%), Gaps = 34/308 (11%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQG--QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DL + L L AK+++G +FD IVIETTGLA P PV +TF DE +++
Sbjct: 61 MSNGCICCTIREDLRETLQLLAAKRRKGLLEFDRIVIETTGLADPGPVAQTFFMDEEIAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+D +ITLVD+KHA Q LN+ + EA QV +AD+I L+K DLV+ E +L
Sbjct: 121 TYLIDSIITLVDAKHAAQQLNDRQ------EARRQVGFADQIFLSKTDLVSSEETDALIH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+KH+N AP+K +G V + VL + G++L ++++ +D H
Sbjct: 175 RLKHMNPRAPIKAVHFGEVPVSEVLDLRGFNL---NAKLDIDPDFLKEEDDHGHAHGHGH 231
Query: 179 HHHNHM--------HDS--------------AVSSVTIVSEGTLDLDEVDDWLERLIEEK 216
HH H H S V S ++ D +++D+L ++
Sbjct: 232 DHHGHDHEHGEHCSHPSHQHAGHGHHHHHDDDVKSFVYRADRPFDPAKLEDFLGAIVNIY 291
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
G + R KG+L + G+E++ +FQGVH + G W E+R +K+VFIG +L + R
Sbjct: 292 GPRMLRYKGVLHMKGTERKVIFQGVHQLMGSDLGPQWAEGEQRQSKMVFIGIDLPQDIFR 351
Query: 277 KGFKGCLA 284
+G + CLA
Sbjct: 352 QGLEQCLA 359
>gi|319791653|ref|YP_004153293.1| cobalamin synthesis protein p47k [Variovorax paradoxus EPS]
gi|315594116|gb|ADU35182.1| cobalamin synthesis protein P47K [Variovorax paradoxus EPS]
Length = 353
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 166/298 (55%), Gaps = 22/298 (7%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQG--QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DL + L L AKK+QG FD +VIETTGLA P PV +TF D+ +++
Sbjct: 61 MSNGCVCCTIREDLREALQLLAAKKRQGLLDFDRVVIETTGLADPGPVAQTFFMDDEIAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD ++TLVD+KHA Q LN+ + EA QV +AD+I ++K +LV+ E +L
Sbjct: 121 SYLLDSILTLVDAKHAPQQLNDRQ------EARRQVGFADQIFISKSELVSAEETEALIH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLER---IDSEVHVDNSHCATHHHESAHGH 175
R+KH+N AP + A +G V + + + G++L ID + ++ H H H H
Sbjct: 175 RLKHMNPRAPQQKAHFGDVPLKDIFDLRGFNLNAKLDIDPDFLKEDDHDHHDHAGHDHAH 234
Query: 176 HEGHHHNHMH----------DSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKG 225
E H D V S ++ D +++D+L ++ G + R KG
Sbjct: 235 GEACDHPSHKHEGHGHHHHTDDDVKSFVYKADRAFDPAKLEDFLGAIVNIYGPRMLRYKG 294
Query: 226 ILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+L++ G+E++ +FQGVH + G WG DE R +++VFIG L L +G + CL
Sbjct: 295 VLNMKGTERKVIFQGVHQLMGSDLGPEWGKDENRQSRMVFIGIELPREILEQGLEQCL 352
>gi|228939184|ref|ZP_04101777.1| Cobalamin synthesis protein [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228972063|ref|ZP_04132679.1| Cobalamin synthesis protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228978674|ref|ZP_04139045.1| Cobalamin synthesis protein [Bacillus thuringiensis Bt407]
gi|228780935|gb|EEM29142.1| Cobalamin synthesis protein [Bacillus thuringiensis Bt407]
gi|228787547|gb|EEM35510.1| Cobalamin synthesis protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228820379|gb|EEM66411.1| Cobalamin synthesis protein [Bacillus thuringiensis serovar
berliner ATCC 10792]
Length = 335
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 163/285 (57%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 77 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 136
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E+E +L
Sbjct: 137 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEESEKENLLH 190
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
I+ IN A + A VD+ +L + + T + H E
Sbjct: 191 EIQGINPTAKLIEATNCEVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 233
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 234 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 289
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ ++ F+ C+
Sbjct: 290 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQEHFEECV 334
>gi|145590193|ref|YP_001156790.1| cobalamin synthesis protein, P47K [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145048599|gb|ABP35226.1| cobalamin synthesis protein, P47K [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 353
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 168/300 (56%), Gaps = 24/300 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL---AKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDLV L +L K K+ FD +VIETTG+A P PV +TF D+ V+
Sbjct: 61 MSNGCICCTIRGDLVDALNELWEQRKNKKISFDRVVIETTGVANPGPVAQTFFMDDDVAD 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+ LD V+TLVD+KH Q LNE + EA QV +AD+I + K DLVT E+ +L
Sbjct: 121 HYVLDAVVTLVDAKHGQQQLNEHE------EAQRQVGFADQIFITKTDLVTPAEVDALRN 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE-RIDSEVHV------DNSHCATHHHE- 170
R+ H+N AP+ G V ++ VL + G++L ++D + H D++ C H
Sbjct: 175 RLMHMNPRAPIAGISKGIVPLNAVLDLKGFNLNAKLDIDPHFLEQDDHDHADCGHDHSHD 234
Query: 171 ------SAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMK 224
H+ HH + H + S S+ D +++D+L ++E GE + R K
Sbjct: 235 HDHSTCGHDHSHDHHHGHAGHTDRIQSFVFRSDKPFDHKKLEDFLGGILEVFGEKMLRYK 294
Query: 225 GILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
G+L V GS ++ VFQGVH + WG + K+ ++VFIG +L + L G +GCLA
Sbjct: 295 GVLYVKGSNRKVVFQGVHQMMGSDLAGPWGTERKQ-TRMVFIGIDLPKDTLLAGLEGCLA 353
>gi|150397965|ref|YP_001328432.1| cobalamin synthesis protein P47K [Sinorhizobium medicae WSM419]
gi|150029480|gb|ABR61597.1| cobalamin synthesis protein P47K [Sinorhizobium medicae WSM419]
Length = 369
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 171/308 (55%), Gaps = 35/308 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 66 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDAIIVETTGLADPVPVAQTFFMDDDVRAKTE 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD ++LNK DLVT EL + ++
Sbjct: 125 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLLNKTDLVTPEELERVEATVR 178
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVH---------VDNSHCATHHHES 171
IN A + + +D+ VL G ++L+R ++++ H V C H
Sbjct: 179 VINPSARIYRTQRSEIDLAKVLDQGAFNLDRALENDPHFLDHDDHDHVCGPDCGHDHDHD 238
Query: 172 AHGHHEGHH-----------------HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIE 214
HH HH + +HD V S+++ G ++ D W++++ +
Sbjct: 239 HGHHHHDHHGHHHDHGHDHDHHHHDAPSPIHDVTVQSISLRG-GEMNPDRFFPWIQKITQ 297
Query: 215 EKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETA 274
G ++ R+KGI++ SG ++YV QGVH ++G + W EKR ++LVFIGR+LD
Sbjct: 298 TDGPNILRLKGIIAFSGDGERYVVQGVHMIIEGDHQRPWKEGEKRESRLVFIGRDLDREK 357
Query: 275 LRKGFKGC 282
+ + F+ C
Sbjct: 358 IERTFRAC 365
>gi|228952429|ref|ZP_04114512.1| Cobalamin synthesis protein [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228807252|gb|EEM53788.1| Cobalamin synthesis protein [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 319
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 61 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E +L
Sbjct: 121 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKENLLH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
I+ IN A + A VD+ +L + + ++ D H
Sbjct: 175 EIQGINPTAKLIEATNCEVDIPSLLQIQTFKMK--------DTLQIYPH----------- 215
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 216 KEHNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ ++ F+ C+
Sbjct: 274 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQEHFEECV 318
>gi|417861671|ref|ZP_12506726.1| cobalamin synthesis protein [Agrobacterium tumefaciens F2]
gi|338822075|gb|EGP56044.1| cobalamin synthesis protein [Agrobacterium tumefaciens F2]
Length = 375
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 168/320 (52%), Gaps = 49/320 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 66 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 124
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +I+NK DLV+ E+ + + ++
Sbjct: 125 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVIVNKTDLVSPEEVARIEDIVR 178
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHES---------- 171
IN A + VD+ VL G ++LER ++ H H HE
Sbjct: 179 AINPSARIYKTTRSGVDLARVLDQGAFNLER----ALENDPHFLEHGHEDHACGPDCDHH 234
Query: 172 ---------------------------AHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDE 204
HGHH + +HD V SV++ G ++ +
Sbjct: 235 HHDHDHHHHDHDHGHHHDHDHGHDHGHDHGHHHHGAVSAIHDVTVQSVSLRG-GEMNPER 293
Query: 205 VDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLV 264
W++++ + G ++ R+KGI++ G ++YV QGVH ++G + W EKR ++LV
Sbjct: 294 FFPWIQKVTQTDGPNILRLKGIIAFKGDAERYVVQGVHMIIEGDHQRPWKDGEKRESRLV 353
Query: 265 FIGRNLDETALRKGFKGCLA 284
FIGR LD L K F CLA
Sbjct: 354 FIGRELDREKLEKSFNACLA 373
>gi|358637104|dbj|BAL24401.1| cobalamin synthesis protein/P47K family protein [Azoarcus sp.
KH32C]
Length = 339
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 163/287 (56%), Gaps = 19/287 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQGQ--FDHIVIETTGLAKPAPVIETFCTD-ELVS 57
+ NGCLCCT+RGDL K LL L A++ G+ FD IVIETTGLA P PV++TF + EL
Sbjct: 65 MTNGCLCCTIRGDLAKSLLDLKARRDAGELAFDRIVIETTGLAAPGPVVQTFFAEPELAD 124
Query: 58 QYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLT 117
Y+ LD V+ +VD+ HA + L+E P + +Q+ +ADR++++K + + + +L
Sbjct: 125 SYL-LDAVLAVVDAIHAPRQLDE-HPVLL-----KQIGFADRLLVSKSEGIADERFDALA 177
Query: 118 ERIKHINAMAPVK-LAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHH 176
ER+ IN AP++ LA G +D+ F+L + G++L +E + N + +
Sbjct: 178 ERLARINPRAPIRRLAATGPLDLAFLLDIRGFNL----NETLLANDAPRFRPAAAGAANA 233
Query: 177 EGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQY 236
G + H V ++ + G +DLD + +++ +++ G+DL R KG+L++ +
Sbjct: 234 FGRRN---HPDEVGALLLEHAGDVDLDRIGAFVQGILDRHGDDLLRYKGVLAIPAQPNRL 290
Query: 237 VFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
VFQGVH G W + R +++V IGR L E LR GF C+
Sbjct: 291 VFQGVHRLAGFDYGSPWSVADARRSRIVLIGRRLPEAELRAGFADCV 337
>gi|423475967|ref|ZP_17452682.1| hypothetical protein IEO_01425 [Bacillus cereus BAG6X1-1]
gi|402434799|gb|EJV66836.1| hypothetical protein IEO_01425 [Bacillus cereus BAG6X1-1]
Length = 316
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 165/285 (57%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + +FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMEFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DLV E+E +L +
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLVDESEKENLLQ 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + A VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIEATNCDVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHLE--GVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIG+++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGKDINKEWFQEHFEECV 315
>gi|171464292|ref|YP_001798405.1| cobalamin synthesis protein P47K [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|171193830|gb|ACB44791.1| cobalamin synthesis protein P47K [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 352
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 113/299 (37%), Positives = 168/299 (56%), Gaps = 23/299 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL---AKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDLV+ L +L K K+ FD +VIETTG+A P PV +TF D+ V+
Sbjct: 61 MSNGCICCTIRGDLVEALNELWEQRKDKKISFDRVVIETTGVANPGPVAQTFFVDDDVAD 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+ LD V+TLVD+KH Q LNE + EA QV +AD+I + K DLV+ E+ +L
Sbjct: 121 HYVLDAVVTLVDAKHGQQQLNEHE------EAQRQVGFADQIFITKTDLVSPAEVDALRN 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE-RIDSEVHV----DNSHCATHHH---- 169
R+ H+N AP+ G V ++ VL + G++L ++D + H D++HC H
Sbjct: 175 RLMHMNPRAPIAGISKGVVPLNAVLDLKGFNLNAKLDIDPHFLEQDDHAHCGHDHSHDHD 234
Query: 170 ----ESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKG 225
H H HH + H + S S + +++D+L ++E GE + R KG
Sbjct: 235 HSTCGHDHSHDHHHHGHVGHADRIQSFVFRSNKPFEHKKLEDFLGGILEVFGEKMLRYKG 294
Query: 226 ILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+L V GS ++ VFQGVH + WG + K+ ++VFIG +L + L G GCLA
Sbjct: 295 VLYVKGSARKVVFQGVHQMMGSDLAGPWGAEPKQ-TRMVFIGIDLPKDTLLAGLDGCLA 352
>gi|445494272|ref|ZP_21461316.1| cobalamin biosynthesis CobW-like protein [Janthinobacterium sp.
HH01]
gi|444790433|gb|ELX11980.1| cobalamin biosynthesis CobW-like protein [Janthinobacterium sp.
HH01]
Length = 356
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 165/304 (54%), Gaps = 31/304 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCTVRGDL+ L LA+K++ FD +VIETTGLA P PV +TF DE V
Sbjct: 61 MNNGCICCTVRGDLIVALSGLAQKREAGELHFDRVVIETTGLANPGPVAQTFFVDEEVGT 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+ LD V+T+VD++HAM L++ + EA QV +AD+++L+K DLV+ ++ +LT
Sbjct: 121 HYMLDAVVTVVDARHAMDQLDQHE------EAQRQVGFADKLLLSKTDLVSADDVATLTA 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+K IN AP+ A +G + VL + G++L + ++ +D T H+
Sbjct: 175 RLKRINPRAPISTADFGRAPLSEVLDLKGFNL---NDKLELDPDFLETDQAHDDDHVHDE 231
Query: 179 HHHNHMHDSA-------------------VSSVTIVSEGTLDLDEVDDWLERLIEEKGED 219
H +H +++ S D ++D++L L+ G
Sbjct: 232 HCGHHHTHDHGHHHEEHGHNHHHAHHSDDIAAFVFKSTRPFDTAKLDEFLGGLVNVYGPR 291
Query: 220 LYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
+ R KG+L + ++++ VFQGVH + G WG ++ R +K+VFIG+NL + G
Sbjct: 292 MLRYKGVLFMKDADRKVVFQGVHQIMGSDLGAKWGENDVRGSKMVFIGKNLPKDIFISGL 351
Query: 280 KGCL 283
+ CL
Sbjct: 352 EQCL 355
>gi|423654836|ref|ZP_17630135.1| hypothetical protein IKG_01824 [Bacillus cereus VD200]
gi|401294341|gb|EJR99969.1| hypothetical protein IKG_01824 [Bacillus cereus VD200]
Length = 316
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
I+ IN A + A VD+ +L + + T + H E
Sbjct: 172 EIQGINPTAKLIEATNCEVDIPSLLQIQTF----------------KTKDKLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQEHFEECV 315
>gi|423424105|ref|ZP_17401136.1| hypothetical protein IE5_01794 [Bacillus cereus BAG3X2-2]
gi|423504360|ref|ZP_17480951.1| hypothetical protein IG1_01925 [Bacillus cereus HD73]
gi|449088850|ref|YP_007421291.1| Cobalamin synthesis protein [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|401114933|gb|EJQ22791.1| hypothetical protein IE5_01794 [Bacillus cereus BAG3X2-2]
gi|402456884|gb|EJV88656.1| hypothetical protein IG1_01925 [Bacillus cereus HD73]
gi|449022607|gb|AGE77770.1| Cobalamin synthesis protein [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 316
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
I+ IN A + A VD+ +L + + ++ D H
Sbjct: 172 EIQGINPTAKLIEATNCEVDIPSLLQIQTFKMK--------DTLQIYPH----------- 212
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 213 KEHNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQEHFEECV 315
>gi|384186053|ref|YP_005571949.1| zinc transporter [Bacillus thuringiensis serovar chinensis CT-43]
gi|410674346|ref|YP_006926717.1| putative GTP-binding protein YjiA [Bacillus thuringiensis Bt407]
gi|452198380|ref|YP_007478461.1| Putative metal chaperone [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|326939762|gb|AEA15658.1| zinc transporter [Bacillus thuringiensis serovar chinensis CT-43]
gi|409173475|gb|AFV17780.1| putative GTP-binding protein YjiA [Bacillus thuringiensis Bt407]
gi|452103773|gb|AGG00713.1| Putative metal chaperone [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 316
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 163/285 (57%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E+E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEESEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
I+ IN A + A VD+ +L + + T + H E
Sbjct: 172 EIQGINPTAKLIEATNCEVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQEHFEECV 315
>gi|451936757|ref|YP_007460611.1| cobalamin synthesis protein [Candidatus Kinetoplastibacterium
oncopeltii TCC290E]
gi|451777680|gb|AGF48655.1| cobalamin synthesis protein [Candidatus Kinetoplastibacterium
oncopeltii TCC290E]
Length = 342
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/287 (34%), Positives = 159/287 (55%), Gaps = 25/287 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKK---KQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CC +RGDLVK LL L K K +FDH++IETTG+A P PV +TF D ++
Sbjct: 68 LSNGCICCNIRGDLVKTLLDLKIKQLNKLLEFDHVIIETTGVANPGPVCQTFFMDNDIAD 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
Y +LD V+T+VD+KH ++ L K R EA +Q+ +AD+I+++K DLV + E+ L +
Sbjct: 128 YYRLDSVVTIVDAKHGVETL---KNRI---EAQKQIGFADKILISKSDLVNDNEISLLKK 181
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEVHVDNSHCATHHHESAHGH 175
+ IN +P+ +G +D+D +L + G++L IDSE + H +
Sbjct: 182 HLIKINPRSPITKINFGDIDVDNILNINGFNLNDVLNIDSEFLKEEEHLCS--------- 232
Query: 176 HEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQ 235
E HHN D+ + S +S D ++++ L L E+ G ++ R KGIL + + ++
Sbjct: 233 -ETCHHN---DNEIRSFVFLSNKPFDSEKLEIVLSELTEKYGSNMLRYKGILYMHDTNKR 288
Query: 236 YVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
+ QGVH + G W +K K+VFIG L + + C
Sbjct: 289 IILQGVHMLMGAEQGNEWEFTQKPNTKIVFIGHKLPKNLFIEKLNEC 335
>gi|229166923|ref|ZP_04294670.1| Cobalamin synthesis protein [Bacillus cereus AH621]
gi|423593998|ref|ZP_17570029.1| hypothetical protein IIG_02866 [Bacillus cereus VD048]
gi|228616551|gb|EEK73629.1| Cobalamin synthesis protein [Bacillus cereus AH621]
gi|401224799|gb|EJR31351.1| hypothetical protein IIG_02866 [Bacillus cereus VD048]
Length = 316
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 161/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E SL
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKESLVH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + VD+ +L + + + D H + H H EG
Sbjct: 172 ELQGINPTAKLIETTNCEVDIPSLLQIQTFKTK--------DTLQIYPH---TEHKHLEG 220
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 221 ----------VKSFVLREERPLDLQKLNEWMSAVVQELGEHLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ R+ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFREHFEECV 315
>gi|30020156|ref|NP_831787.1| zinc transporter [Bacillus cereus ATCC 14579]
gi|228920753|ref|ZP_04084093.1| Cobalamin synthesis protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|229109511|ref|ZP_04239102.1| Cobalamin synthesis protein [Bacillus cereus Rock1-15]
gi|229127454|ref|ZP_04256447.1| Cobalamin synthesis protein [Bacillus cereus BDRD-Cer4]
gi|229144662|ref|ZP_04273063.1| Cobalamin synthesis protein [Bacillus cereus BDRD-ST24]
gi|29895706|gb|AAP08988.1| Low-affinity zinc transport protein [Bacillus cereus ATCC 14579]
gi|228638794|gb|EEK95223.1| Cobalamin synthesis protein [Bacillus cereus BDRD-ST24]
gi|228655995|gb|EEL11840.1| Cobalamin synthesis protein [Bacillus cereus BDRD-Cer4]
gi|228673930|gb|EEL29183.1| Cobalamin synthesis protein [Bacillus cereus Rock1-15]
gi|228838864|gb|EEM84165.1| Cobalamin synthesis protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 319
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 61 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E +L
Sbjct: 121 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKENLLH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
I+ IN A + A VD+ +L + + T + H E
Sbjct: 175 EIQGINPTAKLIEATNCEVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 217
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 218 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ ++ F+ C+
Sbjct: 274 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQEHFEECV 318
>gi|229150283|ref|ZP_04278503.1| Cobalamin synthesis protein [Bacillus cereus m1550]
gi|228633181|gb|EEK89790.1| Cobalamin synthesis protein [Bacillus cereus m1550]
Length = 319
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 61 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E +L
Sbjct: 121 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKENLLH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
I+ IN A + A VD+ +L + + T + H E
Sbjct: 175 EIQGINPTAKLIEATNCEVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 217
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 218 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ ++ F+ C+
Sbjct: 274 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQEHFEECV 318
>gi|414887455|tpg|DAA63469.1| TPA: hypothetical protein ZEAMMB73_195159 [Zea mays]
gi|414887456|tpg|DAA63470.1| TPA: hypothetical protein ZEAMMB73_195159 [Zea mays]
Length = 363
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 157/281 (55%), Gaps = 17/281 (6%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CC+V+ LV+ L QL ++K + DHI++ETTGLA PAP++ D+ + + LD
Sbjct: 96 NGCVCCSVKHSLVQALEQLVQRKD-RMDHILLETTGLADPAPLVSVLWLDDQLESSIVLD 154
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIKHI 123
+IT++D+K+ ++E K EA Q+A+AD +ILNKIDLV E L L + I+ +
Sbjct: 155 SIITVIDAKNFRVQIDEHKNSSSFPEAFHQIAFADVVILNKIDLV-EDSLEDLEKHIRDV 213
Query: 124 NAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHHNH 183
NA+ V + VD++ V Y + + H + + + +
Sbjct: 214 NALVTVVRSVRCQVDLNEVFNRQAYGAKN-------------SSHLQELLDYSKSVPPSR 260
Query: 184 MHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGE--DLYRMKGILSVSGSEQQYVFQGV 241
HD+++S++ I + +++L +V+ WLE L+ EK D+YR KGIL + S+Q + Q V
Sbjct: 261 RHDNSISTLCIYEQDSVNLAKVESWLEDLLWEKKSIMDIYRCKGILYIHDSDQVHTLQAV 320
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
+ P + W E R+NK+V IGRNLD L+ F GC
Sbjct: 321 REVYEVVPARKWSETESRMNKIVVIGRNLDINVLQDSFSGC 361
>gi|239813911|ref|YP_002942821.1| cobalamin synthesis protein P47K [Variovorax paradoxus S110]
gi|239800488|gb|ACS17555.1| cobalamin synthesis protein P47K [Variovorax paradoxus S110]
Length = 349
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/297 (35%), Positives = 167/297 (56%), Gaps = 24/297 (8%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQG--QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DL + L L AKK+QG FD +VIETTGLA P PV +TF D+ +++
Sbjct: 61 MSNGCVCCTIREDLREALQLLAAKKRQGLLDFDRVVIETTGLADPGPVAQTFFMDDEIAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD ++TLVD+KHA Q LN+ + EA QV +AD+I ++K +LV+ E +L
Sbjct: 121 SYLLDSILTLVDAKHAPQQLNDRQ------EARRQVGFADQIFISKSELVSAEETEALIH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+KH+N AP + A +G V + + + G++L ++++ +D H H G
Sbjct: 175 RLKHMNPRAPQQKAHFGDVPLKDIFDLRGFNL---NAKLDIDPDFLKEEEDHHDHDHAHG 231
Query: 179 HHHNH------------MHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGI 226
H +H D V S ++ D +++D+L ++ G + R KG+
Sbjct: 232 EHCDHPSHKHEGHGHHHHTDDDVKSFVYKADRPFDPAKLEDFLGAIVNIYGPRMLRYKGV 291
Query: 227 LSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
L++ G+E++ +FQGVH + G WG DE R +++VFIG L L +G + CL
Sbjct: 292 LNMKGTERKVIFQGVHQLMGSDLGPEWGKDEARQSRMVFIGIELPREILEQGLEQCL 348
>gi|218232886|ref|YP_002366740.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
B4264]
gi|218160843|gb|ACK60835.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
B4264]
Length = 316
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E +L
Sbjct: 118 VYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
I+ IN A + A VD+ +L + + T + H E
Sbjct: 172 EIQGINPTAKLIEATNCEVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQEHFEECV 315
>gi|375103867|ref|ZP_09750128.1| putative GTPase, G3E family [Burkholderiales bacterium JOSHI_001]
gi|374664598|gb|EHR69383.1| putative GTPase, G3E family [Burkholderiales bacterium JOSHI_001]
Length = 346
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 169/289 (58%), Gaps = 13/289 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CC++R DL L LA K+++G+ FD +VIETTGLA P PV +TF D+ +++
Sbjct: 63 MNNGCVCCSIREDLRSTLADLAEKRRKGELDFDRVVIETTGLADPGPVAQTFFMDDEIAE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD V+TLVD+KHA Q L+ + EA QV +AD+I ++K DLV + +L
Sbjct: 123 SYLLDSVLTLVDAKHADQQLDARQ------EARRQVGFADQIFISKTDLVDAGVVDALAH 176
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSE-VHVDNSHCATHHHESAHG 174
R+KH+N AP +G V + V + G++L ID E + D H H+ HG
Sbjct: 177 RLKHMNPRAPHSRVHFGEVPIASVFDLRGFNLNAKLEIDPEFLTEDQHDHHDHDHDHEHG 236
Query: 175 HHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQ 234
H H H+H HD V S S+ +++D+L +++ G + R KG+L + GSE+
Sbjct: 237 EHCDHPHHHAHDDDVKSFAFRSDKPFSAPKLEDFLGSIVQVYGPKMLRYKGVLYMKGSER 296
Query: 235 QYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+ VFQGVH + G W P EK+++KLVFIG +L L +G +GCL
Sbjct: 297 KVVFQGVHQLMGSDLGPKWAPGEKKMSKLVFIGIDLPRDILLQGLEGCL 345
>gi|456064348|ref|YP_007503318.1| Cobalamin synthesis protein, P47K [beta proteobacterium CB]
gi|455441645|gb|AGG34583.1| Cobalamin synthesis protein, P47K [beta proteobacterium CB]
Length = 353
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 114/300 (38%), Positives = 168/300 (56%), Gaps = 24/300 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL---AKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDLV+ L L K K+ FD +VIETTG+A P PV +TF D+ V+
Sbjct: 61 MSNGCICCTIRGDLVEALNSLWEQRKDKKISFDRVVIETTGVANPGPVAQTFFMDDDVAD 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+ LD V+TLVD+KH Q L E + EA QV +AD+I + K DLVT E+ +L
Sbjct: 121 HYVLDAVVTLVDAKHGPQQLTEHE------EAQRQVGFADQIFITKTDLVTPAEVDALRN 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE-RIDSEVHV------DNSHCATHHHES 171
R+ H+N AP++ G V +D VL + G++L ++D + H D++ C H
Sbjct: 175 RLMHMNPRAPIQGISKGVVPLDAVLDLKGFNLNAKLDIDPHFLEQDDHDHATCGHDHSHD 234
Query: 172 AHGHHE-------GHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMK 224
H H HH + H + S S+ D +++D+L ++E GE + R K
Sbjct: 235 HHDHSSCGHDHSHDHHGHAGHTDRIQSFVFRSDKPFDHKKLEDFLGGILEVFGEKMLRYK 294
Query: 225 GILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
G+L V GS ++ VFQGVH + WG + K+ ++VFIG +L + L G +GCLA
Sbjct: 295 GVLYVKGSNRKVVFQGVHQMMGSDLAGVWGAEPKQ-TRMVFIGIDLPKDTLLAGLEGCLA 353
>gi|229069594|ref|ZP_04202882.1| Cobalamin synthesis protein [Bacillus cereus F65185]
gi|228713504|gb|EEL65391.1| Cobalamin synthesis protein [Bacillus cereus F65185]
Length = 319
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 61 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E +L
Sbjct: 121 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADIVLVNKLDLIEENEKENLLH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
I+ IN A + A VD+ +L + + T + H E
Sbjct: 175 EIQGINPTAKLIEATNCEVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 217
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 218 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ ++ F+ C+
Sbjct: 274 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQEHFEECV 318
>gi|91781469|ref|YP_556675.1| hypothetical protein Bxe_A4377 [Burkholderia xenovorans LB400]
gi|385207309|ref|ZP_10034177.1| putative GTPase, G3E family [Burkholderia sp. Ch1-1]
gi|91685423|gb|ABE28623.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
gi|385179647|gb|EIF28923.1| putative GTPase, G3E family [Burkholderia sp. Ch1-1]
Length = 363
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/311 (35%), Positives = 166/311 (53%), Gaps = 36/311 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL ++L LA +KQ FD +VIETTGLA P PV +TF D+ ++
Sbjct: 59 MSNGCICCTIRGDLSRVLGDLAAQKQAGTLDFDRVVIETTGLANPGPVAQTFFMDDQIAN 118
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD +ITLVD+KHA L+E +E V+ QV +ADR+ + K DLV E L L
Sbjct: 119 EFLLDAIITLVDAKHANHQLDE-------HEVVQRQVGFADRLFITKSDLVDEKHLADLR 171
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEVHVDNSHCATHHHES--- 171
R+ H+N A +K+ +G D+ + + G++L ID + V++ H +H H
Sbjct: 172 HRLLHMNPRAAIKVVNFGEADIKEIFDLRGFNLNSKLEIDPDFLVEDEHAHSHAHAHDEH 231
Query: 172 --AHGHHEGHHHNHMH-----------------DSAVSSVTIVSEGTLDLDEVDDWLERL 212
H H H+H H D + S ++ D ++++D+L +
Sbjct: 232 GHTHDDHANCDHDHGHCDHEGHDHGHHHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGI 291
Query: 213 IEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDE 272
++ GE L R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG L +
Sbjct: 292 LQIYGERLLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWQPIEKKTNKMVFIGIELPQ 351
Query: 273 TALRKGFKGCL 283
+ G CL
Sbjct: 352 DLITDGLDACL 362
>gi|395008119|ref|ZP_10391807.1| putative GTPase, G3E family [Acidovorax sp. CF316]
gi|394313911|gb|EJE50873.1| putative GTPase, G3E family [Acidovorax sp. CF316]
Length = 356
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/302 (38%), Positives = 172/302 (56%), Gaps = 25/302 (8%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQG--QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DL + L L AKK++G FD IVIETTGLA P PV +TF DE +++
Sbjct: 61 MSNGCICCTIREDLRETLQLLAAKKRKGLLDFDRIVIETTGLADPGPVAQTFFMDEEIAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+D ++TLVD+KHA Q LN+ + EA QV +AD+I L+K DLV+ E +L
Sbjct: 121 TYLIDSIVTLVDAKHAPQQLNDRQ------EARRQVGFADQIFLSKTDLVSAEETDALIH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE-RIDSEVHVDNSHCATHHHESAHGH-- 175
R+KH+N AP+K +G V + VL + G++L ++D + A HH+ H H
Sbjct: 175 RLKHMNPRAPIKAVHFGEVPLKEVLDLRGFNLNAKLDIDPDFLKEEGAHDHHDHGHDHHD 234
Query: 176 --------HEGHH-----HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYR 222
H H H+H HD V S S D +++D+L ++ G + R
Sbjct: 235 HEHGEHCDHPSHQHGGHGHHHHHDDDVKSFVFRSTRPFDPAKLEDFLGAIVNIYGPRMLR 294
Query: 223 MKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
KG+L + G+E++ +FQGVH + G W E+R++K+VFIG +L + L +G +
Sbjct: 295 YKGVLYMKGTERKVIFQGVHQLMGSDLGPQWAEGEERLSKMVFIGIDLPKDILLQGLEQS 354
Query: 283 LA 284
LA
Sbjct: 355 LA 356
>gi|298709695|emb|CBJ31500.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 589
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 174/361 (48%), Gaps = 96/361 (26%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CCT RGDLV L +++KK FD ++IETTG+A PAPV +TF D V + +LD
Sbjct: 84 NGCICCTARGDLVGALKRMSKK-LSSFDAVLIETTGMADPAPVAQTFFVDADVQEKYRLD 142
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLV--------------- 108
G++T+VD+ H QHL+E KP NE +EQ+A+ADRIILNK DLV
Sbjct: 143 GIVTVVDAAHVEQHLDEEKPEGACNEPLEQMAFADRIILNKTDLVGKKDEKKPADDDAAG 202
Query: 109 ----TETELG-------------------------------SLTERIKHINAMAPVKLAK 133
TET+ L RI+ +NA A + ++
Sbjct: 203 GGACTETDAAVSYGNNALAPTRANAKKAKDASKAPAEAALAKLEARIRAVNAHATIIRSE 262
Query: 134 YGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHHNHMHDSAVSSVT 193
+ V +L + +DL R+ + VD + + +H+HD +VSSV
Sbjct: 263 FSRVPPKELLNLSAFDLNRV---LDVDPAFLTS------------DGTDHVHDESVSSVA 307
Query: 194 IVSEG-TLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDG----- 247
G L+++ + ++ L+EE G +L+R KG+L+V G E++++FQGVH +G
Sbjct: 308 WSFPGLELNVNLLQKFISDLLEELGTELFRYKGVLAVKGMEEKFIFQGVHMLFNGGFASQ 367
Query: 248 ----------------------CPGKAWGPDEKRINKLVFIGRNLDETA--LRKGFKGCL 283
P W D +R + +FIG+N+ E A L+K F C
Sbjct: 368 VLGPDATKIDPKAEQDGGGKKATPPGLWASDAERECRFIFIGKNIKENAESLKKEFLSCT 427
Query: 284 A 284
A
Sbjct: 428 A 428
>gi|424877721|ref|ZP_18301365.1| putative GTPase, G3E family [Rhizobium leguminosarum bv. trifolii
WU95]
gi|392521286|gb|EIW46014.1| putative GTPase, G3E family [Rhizobium leguminosarum bv. trifolii
WU95]
Length = 360
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 168/300 (56%), Gaps = 25/300 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 67 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +I+NK DLVT EL + + ++
Sbjct: 126 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVIINKSDLVTPEELDVIEDIVR 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHV-----DNSHCAT--------- 166
IN A V VD+ VL G ++LER ++++ H D+ C
Sbjct: 180 AINPAARVYKTSRSGVDLARVLDQGAFNLERALENDPHFLEHGHDDHVCGPDCDHDHHHH 239
Query: 167 --HHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMK 224
H H HH + +HD V SV++ G ++ + W++++ + +G ++ R+K
Sbjct: 240 DHDHDHHGHDHHHHGAMSAIHDVTVQSVSLRG-GEMNPERFFPWVQKVTQTQGPNILRLK 298
Query: 225 GILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
GI++ ++YV QGVH ++G + W EK ++LVFIGR LD L FK C A
Sbjct: 299 GIIAFKDDPERYVVQGVHMIIEGDHQRPWKEGEKHESRLVFIGRELDREKLEASFKACEA 358
>gi|423383447|ref|ZP_17360703.1| hypothetical protein ICE_01193 [Bacillus cereus BAG1X1-2]
gi|401643268|gb|EJS60968.1| hypothetical protein ICE_01193 [Bacillus cereus BAG1X1-2]
Length = 316
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKENLLY 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
I+ IN A + A VD+ +L + + T + H E
Sbjct: 172 EIQGINPTAKLIEATNCEVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQEHFEECV 315
>gi|222149788|ref|YP_002550745.1| hypothetical protein Avi_3796 [Agrobacterium vitis S4]
gi|221736770|gb|ACM37733.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 365
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 166/311 (53%), Gaps = 40/311 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ +FD I++ETTGLA P PV +TF D+ V +
Sbjct: 65 MNNGCVCCTVRGDLIRVVEGLMRRPD-RFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 123
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL + + ++
Sbjct: 124 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVVINKADLVTHEELHRIEDIVR 177
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAH-------- 173
IN A + VD+ VL G ++LER ++ H +H + H
Sbjct: 178 AINPSARIYTTTRSGVDLSKVLNQGAFNLER----ALENDPHFLSHDEDDDHVCGPDCDH 233
Query: 174 --------------------GHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLI 213
HH H + +HD V+S+++ G ++ D W++++
Sbjct: 234 DHGHDHHHHDHGHDHDHDHGHHHHDHGPSPIHDVTVTSISLRG-GEMNPDRFFPWIQKVT 292
Query: 214 EEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDET 273
+ G ++ R+KGI++ G ++YV QGVH ++G + W EK ++LVFIGR LD
Sbjct: 293 QTDGPNILRLKGIIAFKGDAERYVVQGVHMIIEGDHQRPWKDGEKHESRLVFIGRELDRE 352
Query: 274 ALRKGFKGCLA 284
L FK C A
Sbjct: 353 KLENSFKACEA 363
>gi|206971981|ref|ZP_03232929.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
AH1134]
gi|296502637|ref|YP_003664337.1| zinc transporter [Bacillus thuringiensis BMB171]
gi|365160393|ref|ZP_09356559.1| hypothetical protein HMPREF1014_02022 [Bacillus sp. 7_6_55CFAA_CT2]
gi|423435519|ref|ZP_17412500.1| hypothetical protein IE9_01700 [Bacillus cereus BAG4X12-1]
gi|423580238|ref|ZP_17556349.1| hypothetical protein IIA_01753 [Bacillus cereus VD014]
gi|423587516|ref|ZP_17563603.1| hypothetical protein IIE_02928 [Bacillus cereus VD045]
gi|423637238|ref|ZP_17612891.1| hypothetical protein IK7_03647 [Bacillus cereus VD156]
gi|423647968|ref|ZP_17623538.1| hypothetical protein IKA_01755 [Bacillus cereus VD169]
gi|206732904|gb|EDZ50078.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
AH1134]
gi|296323689|gb|ADH06617.1| zinc transporter [Bacillus thuringiensis BMB171]
gi|363623344|gb|EHL74466.1| hypothetical protein HMPREF1014_02022 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401125757|gb|EJQ33517.1| hypothetical protein IE9_01700 [Bacillus cereus BAG4X12-1]
gi|401217693|gb|EJR24387.1| hypothetical protein IIA_01753 [Bacillus cereus VD014]
gi|401227253|gb|EJR33782.1| hypothetical protein IIE_02928 [Bacillus cereus VD045]
gi|401273181|gb|EJR79166.1| hypothetical protein IK7_03647 [Bacillus cereus VD156]
gi|401285922|gb|EJR91761.1| hypothetical protein IKA_01755 [Bacillus cereus VD169]
Length = 316
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
I+ IN A + A VD+ +L + + T + H E
Sbjct: 172 EIQGINPTAKLIEATNCEVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQEHFEECV 315
>gi|228958335|ref|ZP_04120060.1| Cobalamin synthesis protein [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|423629090|ref|ZP_17604838.1| hypothetical protein IK5_01941 [Bacillus cereus VD154]
gi|228801356|gb|EEM48248.1| Cobalamin synthesis protein [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|401267845|gb|EJR73900.1| hypothetical protein IK5_01941 [Bacillus cereus VD154]
Length = 316
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
I+ IN A + A VD+ +L + + T + H E
Sbjct: 172 EIQGINPTAKLIEATNCEVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQEHFEECV 315
>gi|229178451|ref|ZP_04305818.1| Cobalamin synthesis protein [Bacillus cereus 172560W]
gi|228605038|gb|EEK62492.1| Cobalamin synthesis protein [Bacillus cereus 172560W]
Length = 319
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 61 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H VK EA EQ+A+AD +++NK+DL+ E E L
Sbjct: 121 AYQINGVVTVVDSYHIHKHF--VKGL----EAKEQIAFADVVLVNKLDLIEENEKEHLLH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
I+ IN A + A VD+ +L + + ++ D H
Sbjct: 175 EIQGINPTAKLIEATNCEVDIPSLLQIQTFKMK--------DTLQIYPH----------- 215
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 216 KEHNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ ++ F+ C+
Sbjct: 274 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQEHFEECV 318
>gi|423414276|ref|ZP_17391396.1| hypothetical protein IE1_03580 [Bacillus cereus BAG3O-2]
gi|423429939|ref|ZP_17406943.1| hypothetical protein IE7_01755 [Bacillus cereus BAG4O-1]
gi|401098420|gb|EJQ06434.1| hypothetical protein IE1_03580 [Bacillus cereus BAG3O-2]
gi|401121135|gb|EJQ28929.1| hypothetical protein IE7_01755 [Bacillus cereus BAG4O-1]
Length = 316
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H VK EA EQ+A+AD +++NK+DL+ E E L
Sbjct: 118 AYQINGVVTVVDSYHIHKHF--VKGL----EAKEQIAFADVVLVNKLDLIEENEKEHLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
I+ IN A + A VD+ +L + + ++ D H
Sbjct: 172 EIQGINPTAKLIEATNCEVDIPSLLQIQTFKMK--------DTLQIYPH----------- 212
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 213 KEHNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQEHFEECV 315
>gi|424897063|ref|ZP_18320637.1| putative GTPase, G3E family [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393181290|gb|EJC81329.1| putative GTPase, G3E family [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 365
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 108/305 (35%), Positives = 169/305 (55%), Gaps = 30/305 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 67 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI LVD+KH L + + EA +Q+A+AD +++NK DLVT EL + + ++
Sbjct: 126 LDAVIALVDAKHLPLRLKDSR------EAEDQIAFADVVVINKSDLVTPEELDVIEDIVR 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHV-----DNSHCAT--------- 166
IN A V VD+ VL G ++LER ++++ H D+ C
Sbjct: 180 AINPAARVYKTSRSGVDLARVLDQGAFNLERALENDPHFLEHGHDDHVCGPDCDHDHHHH 239
Query: 167 -------HHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGED 219
H H HH + +HD V SV++ G ++ + W++++ + +G +
Sbjct: 240 DHDHDHHGHEHHGHEHHHHGAMSAIHDVTVQSVSLRG-GQMNAERFFPWIQKVTQTQGPN 298
Query: 220 LYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
+ R+KGI++ ++YV QGVH ++G + W EK ++LVFIGR+LD L F
Sbjct: 299 ILRLKGIIAFKDDPERYVVQGVHMIIEGDHQRPWKEGEKHESRLVFIGRDLDREKLEASF 358
Query: 280 KGCLA 284
K C A
Sbjct: 359 KACEA 363
>gi|229172743|ref|ZP_04300299.1| Cobalamin synthesis protein [Bacillus cereus MM3]
gi|228610708|gb|EEK67974.1| Cobalamin synthesis protein [Bacillus cereus MM3]
Length = 319
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 164/285 (57%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + +FD +VIETTGLA P P+I+TF D ++
Sbjct: 61 MTNGCLCCTVREDLLVALKQLLDVKAEGKMEFDGLVIETTGLANPGPIIQTFFLDPVIQS 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DLV E+E +L +
Sbjct: 121 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLVDESEKENLLQ 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + A VD+ +L + + T + H E
Sbjct: 175 ELQGINPTAKLIEATNCDVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 217
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 218 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIG+++++ ++ F C+
Sbjct: 274 QGVHTLFAASYDREWQEGEERVSEVVFIGKDINKEWFQEHFGECV 318
>gi|307110540|gb|EFN58776.1| hypothetical protein CHLNCDRAFT_29783 [Chlorella variabilis]
Length = 403
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 161/318 (50%), Gaps = 55/318 (17%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGC+CC+ + D+V+ L L +++ +FD+++IETTGLA P PV TDE + V
Sbjct: 104 LENGCICCSAKNDMVRALEALMQQRS-RFDYVLIETTGLANPGPVAAALWTDEQLESSVC 162
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD +H + L +P +NEA +QVA+AD ++LNK+DL E +L + I+
Sbjct: 163 LDCIVTVVDGRHVERQLGAPRPAGAINEAQQQVAFADVVLLNKVDLAGEEQLARVEGTIR 222
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+NA A + + +D+ +L G Y A A G G
Sbjct: 223 GMNAEAAILRCQRCEIDLARILNTGIYS---------------AVMQGLQAAGAEPGSG- 266
Query: 182 NHMHDSAVSSVTIVSEG-TLDLDEVDDWLERLIEEKGED--------------------- 219
HDS V +VTI+ G LDL + WL+ L+ E+ ++
Sbjct: 267 ---HDSRVGTVTILLPGRPLDLPRLRHWLDALLWEQEQEQEQGQGQGQGSEGAAAGAAGG 323
Query: 220 -------------LYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFI 266
++R+KG+L V GSE++++ QGVH D G AW P E R +K+V I
Sbjct: 324 AAGAATAAAAAPVIFRIKGLLHVEGSERKHILQGVHEIYDVVEGPAWAPGEDRRSKVVLI 383
Query: 267 GRNLDETALRKGFKGCLA 284
GR LD AL +G CLA
Sbjct: 384 GRGLDRRALERGLHSCLA 401
>gi|229029755|ref|ZP_04185827.1| Cobalamin synthesis protein [Bacillus cereus AH1271]
gi|228731570|gb|EEL82480.1| Cobalamin synthesis protein [Bacillus cereus AH1271]
Length = 316
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 164/285 (57%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DLV E+E +L +
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLVDESEKENLLQ 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + A VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIEATNCDVDIQSLLQIQTF----------------KTKDTLQIYPHTE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHLE--GVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIG+++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGKDINKEWFQEHFEECV 315
>gi|423419978|ref|ZP_17397067.1| hypothetical protein IE3_03450 [Bacillus cereus BAG3X2-1]
gi|401101887|gb|EJQ09874.1| hypothetical protein IE3_03450 [Bacillus cereus BAG3X2-1]
Length = 316
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 164/285 (57%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DLV E+E +L +
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLVDESEKENLLQ 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + A VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIEATNCDVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHLE--GVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIG+++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGKDINKEWFQEHFQECV 315
>gi|86359215|ref|YP_471107.1| cobalamin synthesis protein P47K family [Rhizobium etli CFN 42]
gi|86283317|gb|ABC92380.1| putative cobalamin synthesis protein, P47K family [Rhizobium etli
CFN 42]
Length = 365
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 170/305 (55%), Gaps = 30/305 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 67 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI LVD+KH L + + EA +Q+A+AD +++NK DLVT EL + + ++
Sbjct: 126 LDAVIALVDAKHLPLRLKDSR------EAEDQIAFADVVVINKSDLVTPEELDVIEDIVR 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHV-----DNSHCAT--------- 166
IN A V VD+ VL G ++LER ++++ H D+ C
Sbjct: 180 AINPAARVYKTSRSGVDLARVLDQGAFNLERALENDPHFLEHGHDDHVCGPDCDHDHHHD 239
Query: 167 -------HHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGED 219
HH H HH + +HD V SV++ G ++ + W++++ + +G +
Sbjct: 240 HDHHHDHDHHHHDHDHHHHGAMSAIHDVTVQSVSLRG-GEMNPERFFPWIQKITQVQGPN 298
Query: 220 LYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
+ R+KGI++ Q+YV QGVH ++G + W EK ++LVFIGR+LD L F
Sbjct: 299 ILRLKGIIAFKDDPQRYVVQGVHMIVEGDHQRPWKDGEKHESRLVFIGRDLDREKLEASF 358
Query: 280 KGCLA 284
K C A
Sbjct: 359 KACEA 363
>gi|219113693|ref|XP_002186430.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583280|gb|ACI65900.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 349
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 165/294 (56%), Gaps = 25/294 (8%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CCTV+ LV L +L +++ D+I+IE +G+A P P+ F DE +S+ ++LD
Sbjct: 65 NGCICCTVKDSLVSTL-ELLLQRRRDLDYILIECSGMANPGPIASLFWLDEGLSR-LRLD 122
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIKHI 123
G++TLVD+ H + L K EA +Q+AYADRI+LNK+DLV E L I+ I
Sbjct: 123 GIVTLVDAAHLERQLGATK------EAAQQIAYADRILLNKVDLVDEASALRLLNLIRTI 176
Query: 124 NAMAPVKLAKYGSV-DMDFVLGVGGYDLERIDSEVHVDN--SHCATHHHESAHGHHEGHH 180
+ AP++ ++ +V D+ +VL +D++R+ N HC+ H H+ HG
Sbjct: 177 HPTAPIRRTQFSAVPDLTWVLDASCFDVDRVKDVDRALNEIEHCSDHSHQHDHGKEATCS 236
Query: 181 --HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSE----- 233
H H ++VS++ IV EG++DL ++D WL L+ ++ +L V ++
Sbjct: 237 ICFAHKHTASVSTLAIVEEGSVDLRKLDQWLASLLWPNQDE---QDKVLPVEFTDDHGLD 293
Query: 234 -QQYVFQGVHSTLDGCPGK---AWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
++++ Q VH + P W +E R K+VFIGRNL + LRKGF C+
Sbjct: 294 SRRFIVQAVHDLWETHPASRELRWDSEEVRDCKVVFIGRNLKKEDLRKGFLSCM 347
>gi|423460032|ref|ZP_17436829.1| hypothetical protein IEI_03172 [Bacillus cereus BAG5X2-1]
gi|401141789|gb|EJQ49340.1| hypothetical protein IEI_03172 [Bacillus cereus BAG5X2-1]
Length = 316
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 164/285 (57%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DLV E+E +L +
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLVGESEKENLLQ 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + A VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIEATNCDVDIQSLLQIQTF----------------KTKDTLQIYPHTE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHLE--GVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIG+++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGKDINKEWFQEHFEECV 315
>gi|423487173|ref|ZP_17463855.1| hypothetical protein IEU_01796 [Bacillus cereus BtB2-4]
gi|423492897|ref|ZP_17469541.1| hypothetical protein IEW_01795 [Bacillus cereus CER057]
gi|423500311|ref|ZP_17476928.1| hypothetical protein IEY_03538 [Bacillus cereus CER074]
gi|401155315|gb|EJQ62726.1| hypothetical protein IEY_03538 [Bacillus cereus CER074]
gi|401156381|gb|EJQ63788.1| hypothetical protein IEW_01795 [Bacillus cereus CER057]
gi|402439050|gb|EJV71059.1| hypothetical protein IEU_01796 [Bacillus cereus BtB2-4]
Length = 316
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 161/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E SL
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKESLVH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + VD+ +L + + + D H + H H EG
Sbjct: 172 ELQGINPTAKLIETTKCEVDIPSLLQIQTFKTK--------DTLQIYPH---TEHNHLEG 220
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 221 ----------VKSFVLREERPLDLQKLNEWMSAVVQELGEHLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQEHFEECV 315
>gi|229079227|ref|ZP_04211774.1| Cobalamin synthesis protein [Bacillus cereus Rock4-2]
gi|228704074|gb|EEL56513.1| Cobalamin synthesis protein [Bacillus cereus Rock4-2]
Length = 338
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 161/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 80 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 139
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E L
Sbjct: 140 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKEHLLH 193
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
I+ IN A + A VD+ +L + + T + H E
Sbjct: 194 EIQGINPTAKLIEATNCEVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 236
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 237 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 292
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ ++ F+ C+
Sbjct: 293 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQEHFEECV 337
>gi|423524101|ref|ZP_17500574.1| hypothetical protein IGC_03484 [Bacillus cereus HuA4-10]
gi|401169944|gb|EJQ77185.1| hypothetical protein IGC_03484 [Bacillus cereus HuA4-10]
Length = 316
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + +FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGEMEFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E SL
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKESLVH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIETTNCEVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIG+++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGKDINKEWFQEHFQECV 315
>gi|163939859|ref|YP_001644743.1| cobalamin synthesis protein P47K [Bacillus weihenstephanensis
KBAB4]
gi|423366192|ref|ZP_17343625.1| hypothetical protein IC3_01294 [Bacillus cereus VD142]
gi|423516729|ref|ZP_17493210.1| hypothetical protein IG7_01799 [Bacillus cereus HuA2-4]
gi|423676205|ref|ZP_17651144.1| hypothetical protein IKS_03748 [Bacillus cereus VDM062]
gi|163862056|gb|ABY43115.1| cobalamin synthesis protein P47K [Bacillus weihenstephanensis
KBAB4]
gi|401088563|gb|EJP96748.1| hypothetical protein IC3_01294 [Bacillus cereus VD142]
gi|401164679|gb|EJQ72012.1| hypothetical protein IG7_01799 [Bacillus cereus HuA2-4]
gi|401307326|gb|EJS12751.1| hypothetical protein IKS_03748 [Bacillus cereus VDM062]
Length = 316
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + A VD+ +L + + + D H + H H EG
Sbjct: 172 ELQGINPTAKLIEATNCEVDIPSLLQIQTFKTK--------DTLQIYPH---TEHNHLEG 220
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 221 ----------VKSFVLREERPLDLQKLNEWMSAVVQELGEHLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQEHFEECV 315
>gi|423600606|ref|ZP_17576606.1| hypothetical protein III_03408 [Bacillus cereus VD078]
gi|423663102|ref|ZP_17638271.1| hypothetical protein IKM_03499 [Bacillus cereus VDM022]
gi|401232645|gb|EJR39144.1| hypothetical protein III_03408 [Bacillus cereus VD078]
gi|401296301|gb|EJS01920.1| hypothetical protein IKM_03499 [Bacillus cereus VDM022]
Length = 316
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + A VD+ +L + + + D H + H H EG
Sbjct: 172 ELQGINPTAKLIEATNCEVDIPSLLQIQTFKTK--------DTLQIYPH---TEHNHLEG 220
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 221 ----------VKSFVLREERPLDLQKLNEWMSAVVQELGEHLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQEHFEECV 315
>gi|407937456|ref|YP_006853097.1| cobalamin synthesis protein P47K [Acidovorax sp. KKS102]
gi|407895250|gb|AFU44459.1| cobalamin synthesis protein P47K [Acidovorax sp. KKS102]
Length = 353
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/301 (36%), Positives = 167/301 (55%), Gaps = 28/301 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQ---FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DL + L LA KK+ FD IVIETTG+A P PV +TF DE +++
Sbjct: 61 MSNGCICCTIREDLRETLQLLAAKKRKNLLDFDRIVIETTGVADPGPVAQTFFMDEEIAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+D +ITLVD+KHA Q LN+ + EA QV +AD+I L+K DLV+ E +L
Sbjct: 121 TYLIDSIITLVDAKHAPQQLNDRQ------EARRQVGFADQIFLSKTDLVSAEEADALIH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHH---------- 168
R+KH+N AP+K +G V + VL + G++L ++++ +D
Sbjct: 175 RLKHMNPRAPIKAVHFGEVPLKEVLDLRGFNL---NAKLDIDPDFLKEEEHGHDHHDHDH 231
Query: 169 ------HESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYR 222
+ AH H H H+H HD V S S+ D +++D+L ++ G + R
Sbjct: 232 EHGEHCNHPAHQHGHEHGHHHHHDDDVKSFVYRSDRPFDPAKLEDFLGAIVNIYGPRMLR 291
Query: 223 MKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
KG+L++ G+E++ +FQGVH + G W E R +K+VFIG +L + +G +
Sbjct: 292 YKGVLNMKGTERKVIFQGVHQLMGSDLGPQWAEGEPRTSKMVFIGIDLPKDIFLQGLEQS 351
Query: 283 L 283
L
Sbjct: 352 L 352
>gi|229190151|ref|ZP_04317154.1| Cobalamin synthesis protein [Bacillus cereus ATCC 10876]
gi|228593268|gb|EEK51084.1| Cobalamin synthesis protein [Bacillus cereus ATCC 10876]
Length = 316
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 161/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKEHLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
I+ IN A + A VD+ +L + + T + H E
Sbjct: 172 EIQGINPTAKLIEATNCEVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQEHFEECV 315
>gi|424872389|ref|ZP_18296051.1| putative GTPase, G3E family [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393168090|gb|EJC68137.1| putative GTPase, G3E family [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 363
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 168/303 (55%), Gaps = 28/303 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 67 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +I+NK DLVT EL + + ++
Sbjct: 126 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVIINKSDLVTPEELDVIEDIVR 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHV-----DNSHCAT--------- 166
IN A V VD+ VL G ++LER ++++ H D+ C
Sbjct: 180 AINPAARVYKTSRSGVDLARVLDQGAFNLERALENDPHFLEQGHDDHVCGPDCDHDHHHH 239
Query: 167 -----HHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLY 221
HH H H + +HD V SV++ G ++ + W++++ + +G ++
Sbjct: 240 DHDHDHHGHDHHHDHHHGAMSAIHDVTVQSVSLRG-GEMNPERFFPWVQKVTQTQGPNIL 298
Query: 222 RMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
R+KGI++ ++YV QGVH ++G + W EK ++LVFIGR LD L FK
Sbjct: 299 RLKGIIAFKDDPERYVVQGVHMIIEGDHQRPWKEGEKHESRLVFIGRELDREKLEASFKA 358
Query: 282 CLA 284
C A
Sbjct: 359 CEA 361
>gi|296136671|ref|YP_003643913.1| cobalamin synthesis protein P47K [Thiomonas intermedia K12]
gi|295796793|gb|ADG31583.1| cobalamin synthesis protein P47K [Thiomonas intermedia K12]
Length = 353
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/300 (36%), Positives = 171/300 (57%), Gaps = 28/300 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTD-ELVS 57
++NGC+CCT+R DL L LA K+++G+ FD +VIETTG+A P PV +TF D E+ S
Sbjct: 62 MSNGCICCTIRDDLRATLADLAAKRRKGELVFDRVVIETTGIADPGPVAQTFFMDDEVAS 121
Query: 58 QYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLT 117
QY+ LD ++TLVD+KHA Q L+ + EA QV +AD+I ++K DLV+ EL +L
Sbjct: 122 QYM-LDAILTLVDAKHANQQLDSRQ------EARRQVGFADQIFISKADLVSADELAALQ 174
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESA----- 172
R+ H+N A + +G V + VL + G++L ++++ +D H+
Sbjct: 175 HRLAHMNPRAKQSVVHFGEVALSQVLDLKGFNL---NAKLDIDPDFLKADDHDHHDHDHD 231
Query: 173 ---------HGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRM 223
HG H H H+H HD V S ++ D +++D+L +++ G + R
Sbjct: 232 HDHHDHDHEHGEHCNHPHHHHHDDDVKSFVYRADKPFDPAKLEDFLGAIVQVYGPRMLRY 291
Query: 224 KGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
KG+L++ G +++ VFQGVH + WG E+R +K+VFIG +L L KG + CL
Sbjct: 292 KGVLNMQGIDRKVVFQGVHQLMGSDLAAPWGAQEQRQSKMVFIGIDLPRDILEKGLQQCL 351
>gi|295675160|ref|YP_003603684.1| cobalamin synthesis protein P47K [Burkholderia sp. CCGE1002]
gi|295435003|gb|ADG14173.1| cobalamin synthesis protein P47K [Burkholderia sp. CCGE1002]
Length = 435
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 167/318 (52%), Gaps = 45/318 (14%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL ++L LA KKQ FD +VIETTGLA P PV +TF D+ ++
Sbjct: 128 MSNGCICCTIRGDLSRVLNDLAAKKQAGEVDFDRVVIETTGLANPGPVAQTFFMDDQIAS 187
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD +ITLVD+KHA + L+E +E V+ QV +ADR+ + K DLV E +G L
Sbjct: 188 DFLLDAIITLVDAKHADRQLDE-------HEVVQRQVGFADRLFITKADLVDERHVGDLR 240
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
R+ H+N A +++ +G D+ + + G++L +S++ +D A H +H H
Sbjct: 241 HRLLHMNPKAAIRVVNFGEADIKEIFDLRGFNL---NSKLEIDPDFLAEDEHAHSHAHAH 297
Query: 178 -----------------GHHHNH--------------MHDSAVSSVTIVSEGTLDLDEVD 206
H H H HD + S S+ D ++++
Sbjct: 298 DEHGHAHGDHDHDHANCDHDHGHCDHEGHDHGHHHHAHHDDKIKSFVYRSDRPFDPNKLE 357
Query: 207 DWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFI 266
D+L +++ GE L R KG+L + G +++ VFQGVH + W P EK+ NK+VFI
Sbjct: 358 DFLGGILQIYGEHLLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWQPAEKKTNKMVFI 417
Query: 267 GRNLDETALRKGFKGCLA 284
G L + G CLA
Sbjct: 418 GIELPRDLITDGLDACLA 435
>gi|218903172|ref|YP_002451006.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
AH820]
gi|218535346|gb|ACK87744.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
AH820]
Length = 316
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 163/285 (57%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD I++NK+DL+ E+E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVILVNKLDLIEESEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + + + VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIQSTHCDVDIPSLLKIQTF----------------KTKDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E R++++VFIG+++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEDRVSEVVFIGKDINKEWFQEHFEECV 315
>gi|221065124|ref|ZP_03541229.1| cobalamin synthesis protein P47K [Comamonas testosteroni KF-1]
gi|220710147|gb|EED65515.1| cobalamin synthesis protein P47K [Comamonas testosteroni KF-1]
Length = 373
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 173/318 (54%), Gaps = 42/318 (13%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DL + L L AK+++GQ F+ IVIETTGLA P PV +TF D+ +++
Sbjct: 61 MSNGCICCTIREDLREALQLLAAKRRKGQVDFERIVIETTGLADPGPVAQTFFMDDEIAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+D +ITLVD+KH+ Q L++ + EA QV +AD++ L+K DLVT+ E +L
Sbjct: 121 TYLIDSIITLVDAKHSNQQLDDRQ------EARRQVGFADQMFLSKTDLVTDAEKEALIH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLER---IDSEVHVDNSHCATHHHESAHGH 175
R+KH+N AP++ +G V + V + G++L ID + + H HH SA H
Sbjct: 175 RLKHMNPRAPIRAVHFGDVPLSEVFDLRGFNLNAKLDIDPDFLKEEGHEHDHHDHSACDH 234
Query: 176 HEGH------------------------------HHNHMHDSAVSSVTIVSEGTLDLDEV 205
G H+H HD V S ++ D ++
Sbjct: 235 DHGQCEHDHDHGHQHDEHCGHDHHDHEHGEHCNHPHHHHHDDDVKSFVYRADRAFDPAKL 294
Query: 206 DDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVF 265
+D+L ++ G + R KG+L + G+ ++ +FQGVH + G W DEKR++K+VF
Sbjct: 295 EDFLGAIVNIYGPKMLRYKGVLDMKGTSRKVIFQGVHQLMGSDLGPEWEADEKRVSKMVF 354
Query: 266 IGRNLDETALRKGFKGCL 283
IG +L + LR+G CL
Sbjct: 355 IGIDLPQDILRQGLDQCL 372
>gi|407711849|ref|YP_006832414.1| cobalamin synthesis protein P47K [Burkholderia phenoliruptrix
BR3459a]
gi|407234033|gb|AFT84232.1| cobalamin synthesis protein P47K [Burkholderia phenoliruptrix
BR3459a]
Length = 365
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/316 (34%), Positives = 167/316 (52%), Gaps = 44/316 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL ++L LA +KQ FD +VIETTGLA P PV +TF D+ ++
Sbjct: 59 MSNGCICCTIRGDLSRVLGDLAAQKQSGKLDFDRVVIETTGLANPGPVAQTFFMDDQIAN 118
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD +ITLVD+KHA L+E +E V+ QV +ADR+ + K DLV E +LG L
Sbjct: 119 EFLLDAIITLVDAKHANHQLDE-------HEVVQRQVGFADRLFITKSDLVDEQQLGDLR 171
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
R+ H+N A +K+ +G D+ + + G++L +S++ +D A H +H H
Sbjct: 172 HRLLHMNPKAAIKVVNFGEADIKEIFDLRGFNL---NSKLEIDPDFLAEDEHAHSHAHAH 228
Query: 178 ----------------GHHHNH--------------MHDSAVSSVTIVSEGTLDLDEVDD 207
H H H HD + S ++ D ++++D
Sbjct: 229 DEHGHTHGHDHDHANCDHDHGHCDHEGHDHGHRHHAHHDDKIKSFVYRNDRPFDPNKLED 288
Query: 208 WLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIG 267
+L +++ GE L R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG
Sbjct: 289 FLGGILQIYGERLLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWQPAEKKTNKMVFIG 348
Query: 268 RNLDETALRKGFKGCL 283
L + + G CL
Sbjct: 349 IELPQDLITDGLDACL 364
>gi|365089151|ref|ZP_09328122.1| cobalamin synthesis protein P47K [Acidovorax sp. NO-1]
gi|363416850|gb|EHL23946.1| cobalamin synthesis protein P47K [Acidovorax sp. NO-1]
Length = 353
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 164/298 (55%), Gaps = 22/298 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQ---FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DL + L LA K++ FD IVIETTG+A P PV +TF DE +++
Sbjct: 61 MSNGCICCTIREDLRETLQLLAAKRRKNLLDFDRIVIETTGVADPGPVAQTFFMDEEIAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+D +ITLVD+KHA Q LN+ + EA QV +AD+I L+K DLV++ E +L
Sbjct: 121 TYLIDSIITLVDAKHAPQQLNDRQ------EARRQVGFADQIFLSKTDLVSQDETEALIH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLER---IDSEVHVDNSHCATHHHESAHGH 175
R+KH+N AP+K +G V + VL + G++L ID + + HH
Sbjct: 175 RLKHMNPRAPIKAVHFGEVPLKEVLDLRGFNLNAKLDIDPDFLKEEGSGHDHHDHDHEHG 234
Query: 176 HEGHHHN----------HMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKG 225
H + H HD V S S+ D +++D+L ++ G + R KG
Sbjct: 235 EHCSHPSHQHEHGHGHHHHHDDDVKSFVYRSDRPFDPAKLEDFLGAIVNIYGPRMLRYKG 294
Query: 226 ILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+L++ G++++ +FQGVH + G W E+R +K+VFIG +L + +G + L
Sbjct: 295 VLNMKGTDRKVIFQGVHQLMGSDLGPQWAEGEQRTSKMVFIGIDLPKDIFLQGLEQSL 352
>gi|241765136|ref|ZP_04763124.1| cobalamin synthesis protein P47K [Acidovorax delafieldii 2AN]
gi|241365215|gb|EER60062.1| cobalamin synthesis protein P47K [Acidovorax delafieldii 2AN]
Length = 356
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 170/305 (55%), Gaps = 31/305 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQ---FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DL + L LA K++ + FD IVIETTG+A P PV +TF DE +++
Sbjct: 61 MSNGCICCTIREDLRETLQLLAAKRRKKLLDFDRIVIETTGVADPGPVAQTFFMDEEIAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+D +ITLVD+KHA Q LN+ + E QV +AD+I L+K DLV+ E +L
Sbjct: 121 TYLIDSIITLVDAKHAAQQLNDRQ------EVRRQVGFADQIFLSKTDLVSADETEALIH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATH----------- 167
R+KH+N AP+K +G V + VL + G++L ++++ +D
Sbjct: 175 RLKHMNPRAPIKAVHFGEVPLSEVLDLRGFNL---NAKLDIDPDFLKEEEEHDHHGHDHH 231
Query: 168 --------HHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGED 219
+H S HEGH H+H HD V S SE D +++D+L ++ G
Sbjct: 232 DHAHGEHCNHPSHQHGHEGHGHHHHHDDDVKSFVYRSERPFDPAKLEDFLGAIVNIYGPR 291
Query: 220 LYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
+ R KG+L + G++++ +FQGVH + G W E R++K+VFIG +L + +G
Sbjct: 292 MLRYKGVLLMKGTDRKVIFQGVHQLMGSDLGPQWAEGEPRMSKMVFIGIDLPKDIFVQGL 351
Query: 280 KGCLA 284
+ LA
Sbjct: 352 EQSLA 356
>gi|299533132|ref|ZP_07046517.1| cobalamin synthesis protein, P47K [Comamonas testosteroni S44]
gi|298718909|gb|EFI59881.1| cobalamin synthesis protein, P47K [Comamonas testosteroni S44]
Length = 389
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/316 (36%), Positives = 174/316 (55%), Gaps = 40/316 (12%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DL + L L AK+++GQ FD IVIETTGLA P PV +TF D+ +++
Sbjct: 79 MSNGCICCTIREDLREALQLLAAKRRKGQVDFDRIVIETTGLADPGPVAQTFFMDDEIAE 138
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+D +ITLVD+KHA Q L++ + EA QV +AD++ L+K DLVT+ E +L
Sbjct: 139 TYLIDSIITLVDAKHANQQLDDRQ------EARRQVGFADQMFLSKTDLVTDAEKEALIH 192
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLER---IDSEVHVDNSHCATHHHESAHGH 175
R+KH+N AP++ +G V + V + G++L ID + ++ H HH SA H
Sbjct: 193 RLKHMNPRAPIRAVHFGDVPLSEVFDLRGFNLNAKLDIDPDFLKEDDHDHDHHDHSACDH 252
Query: 176 HEGH----------------------------HHNHMHDSAVSSVTIVSEGTLDLDEVDD 207
G H+H HD V S ++ D +++D
Sbjct: 253 DHGQCEHDHEHQHDEHCGHDHHDHEHGEHCNHPHHHHHDDDVKSFVYRADRAFDPAKLED 312
Query: 208 WLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIG 267
+L ++ G + R KG+L + G+ ++ +FQGVH + G W DEKR++K+VFIG
Sbjct: 313 FLGAIVNIYGPKMLRYKGVLDMKGTSRKVIFQGVHQLMGSDLGPEWEADEKRVSKMVFIG 372
Query: 268 RNLDETALRKGFKGCL 283
+L + LR+G CL
Sbjct: 373 IDLPQDILRQGLDQCL 388
>gi|30262048|ref|NP_844425.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. Ames]
gi|47527319|ref|YP_018668.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. 'Ames Ancestor']
gi|165870228|ref|ZP_02214884.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. A0488]
gi|190569177|ref|ZP_03022074.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. Tsiankovskii-I]
gi|227815154|ref|YP_002815163.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. CDC 684]
gi|229601807|ref|YP_002866415.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. A0248]
gi|254684613|ref|ZP_05148473.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. CNEVA-9066]
gi|254721372|ref|ZP_05183162.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. A1055]
gi|254734921|ref|ZP_05192633.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. Western North America USA6153]
gi|254741319|ref|ZP_05199007.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. Kruger B]
gi|254750872|ref|ZP_05202911.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. Vollum]
gi|254760112|ref|ZP_05212136.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. Australia 94]
gi|421508454|ref|ZP_15955367.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. UR-1]
gi|421635846|ref|ZP_16076445.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. BF1]
gi|30256674|gb|AAP25911.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. Ames]
gi|47502467|gb|AAT31143.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. 'Ames Ancestor']
gi|164714116|gb|EDR19637.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. A0488]
gi|190559678|gb|EDV13666.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. Tsiankovskii-I]
gi|227006080|gb|ACP15823.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. CDC 684]
gi|229266215|gb|ACQ47852.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. A0248]
gi|401821380|gb|EJT20537.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. UR-1]
gi|403396374|gb|EJY93611.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. BF1]
Length = 316
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 163/285 (57%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD I++NK+DL+ E+E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVILVNKLDLIEESEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + + VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIQSTNCDVDIPSLLKIQTF----------------KTKDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIG+++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGKDINKEWFQEHFEECV 315
>gi|264680260|ref|YP_003280170.1| cobalamin synthesis protein, P47K [Comamonas testosteroni CNB-2]
gi|262210776|gb|ACY34874.1| cobalamin synthesis protein, P47K [Comamonas testosteroni CNB-2]
Length = 389
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/316 (35%), Positives = 173/316 (54%), Gaps = 40/316 (12%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DL + L L AK+++GQ FD IVIETTGLA P PV +TF D+ +++
Sbjct: 79 MSNGCICCTIREDLREALQLLAAKRRKGQVDFDRIVIETTGLADPGPVAQTFFMDDEIAE 138
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+D +ITLVD+KHA Q L++ + EA QV +AD++ L+K DLVT+ E +L
Sbjct: 139 TYLIDSIITLVDAKHANQQLDDRQ------EARRQVGFADQMFLSKTDLVTDAEKEALIH 192
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLER---IDSEVHVDNSHCATHHHESAHGH 175
R+KH+N AP++ +G V + V + G++L ID + ++ H HH SA H
Sbjct: 193 RLKHMNPRAPIRAVHFGDVPLSEVFDLRGFNLNAKLDIDPDFLKEDDHDHDHHDHSACDH 252
Query: 176 HEGH----------------------------HHNHMHDSAVSSVTIVSEGTLDLDEVDD 207
G +H HD V S ++ D +++D
Sbjct: 253 DHGQCEHDHEHQHDEHCGHDHHDHEHGEHCNHPRHHHHDDDVKSFVYRADRAFDPAKLED 312
Query: 208 WLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIG 267
+L ++ G + R KG+L + G+ ++ +FQGVH + G W DEKR++K+VFIG
Sbjct: 313 FLGAIVNIYGPKMLRYKGVLDMKGTSRKVIFQGVHQLMGSDLGPEWEADEKRVSKMVFIG 372
Query: 268 RNLDETALRKGFKGCL 283
+L + LR+G CL
Sbjct: 373 IDLPQDILRQGLDQCL 388
>gi|384180012|ref|YP_005565774.1| cobalamin synthesis protein/P47K family protein [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|324326096|gb|ADY21356.1| cobalamin synthesis protein/P47K family protein [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 316
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + K + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKTKGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E+E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEESEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + + VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIQSTNCDVDIPSLLQIQTF----------------KTKDTLQIYPHTE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E R++++VFIG+++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEDRVSEVVFIGKDINKEWFQEHFEECV 315
>gi|49184891|ref|YP_028143.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. Sterne]
gi|65319335|ref|ZP_00392294.1| COG0523: Putative GTPases (G3E family) [Bacillus anthracis str.
A2012]
gi|167633015|ref|ZP_02391341.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. A0442]
gi|167638425|ref|ZP_02396702.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. A0193]
gi|170686414|ref|ZP_02877635.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. A0465]
gi|170706109|ref|ZP_02896571.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. A0389]
gi|177650734|ref|ZP_02933631.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. A0174]
gi|386735793|ref|YP_006208974.1| Cobalamin synthesis protein [Bacillus anthracis str. H9401]
gi|49178818|gb|AAT54194.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. Sterne]
gi|167513726|gb|EDR89095.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. A0193]
gi|167531827|gb|EDR94492.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. A0442]
gi|170129111|gb|EDS97976.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. A0389]
gi|170669490|gb|EDT20232.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. A0465]
gi|172083195|gb|EDT68256.1| cobalamin synthesis protein/P47K family protein [Bacillus anthracis
str. A0174]
gi|384385645|gb|AFH83306.1| Cobalamin synthesis protein [Bacillus anthracis str. H9401]
Length = 319
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 163/285 (57%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 61 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD I++NK+DL+ E+E +L
Sbjct: 121 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVILVNKLDLIEESEKENLLH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + + VD+ +L + + T + H E
Sbjct: 175 ELQGINPTAKLIQSTNCDVDIPSLLKIQTF----------------KTKDTLQIYPHKE- 217
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 218 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIG+++++ ++ F+ C+
Sbjct: 274 QGVHTLFAASYDREWQEGEERVSEVVFIGKDINKEWFQEHFEECV 318
>gi|152975315|ref|YP_001374832.1| cobalamin synthesis protein P47K [Bacillus cytotoxicus NVH 391-98]
gi|152024067|gb|ABS21837.1| cobalamin synthesis protein P47K [Bacillus cytotoxicus NVH 391-98]
Length = 319
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 160/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 61 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
K+DGV+T++DS H +H + EA EQ+A+AD +++NK+DL+ E E +L
Sbjct: 121 SYKVDGVVTVIDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIGEVEKEALLI 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ +N A + VD+ +L + + R E++
Sbjct: 175 ELQGMNPTAKLIPTTNCEVDISALLEIQTFK-TRDTLEIY-------------------- 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H H H V S + + LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 214 PHTEHHHLEGVKSFVLREKQPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDRRIVF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W EKRI+++VFIG+++++ ++ FK C+
Sbjct: 274 QGVHTLFAASYDREWQEGEKRISEVVFIGKDINKEWFQEHFKECI 318
>gi|423617781|ref|ZP_17593615.1| hypothetical protein IIO_03107 [Bacillus cereus VD115]
gi|401254546|gb|EJR60773.1| hypothetical protein IIO_03107 [Bacillus cereus VD115]
Length = 316
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + F+ +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFEGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E+E +L
Sbjct: 118 AYQINGVVTVVDSYHIYKHFEKGL------EAKEQIAFADVVLVNKLDLIEESEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + A VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIEATNCEVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHLE--GVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W EKR++++VFIG+++++ ++ F C+
Sbjct: 271 QGVHTLFAASYDREWQEGEKRVSEVVFIGKDINKEWFQEHFGECV 315
>gi|330843629|ref|XP_003293752.1| hypothetical protein DICPUDRAFT_58645 [Dictyostelium purpureum]
gi|325075889|gb|EGC29726.1| hypothetical protein DICPUDRAFT_58645 [Dictyostelium purpureum]
Length = 388
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 167/304 (54%), Gaps = 30/304 (9%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CCTV+ D ++ + L K+ +FD+I+IE+TG+ P + + DE + + LD
Sbjct: 84 NGCICCTVKDDFLQSIEDLLKR-SDKFDYILIESTGMGDPGQISSSLWVDEELESPIYLD 142
Query: 64 GVITLVDSKHAMQHLNEVK---------------------PRFVVNEAVEQVAYADRIIL 102
G+ITLVD+KH +H+ + K ++ E Q+A+AD I+L
Sbjct: 143 GIITLVDAKHVEKHIEKSKASEKLSMNNSNNTHNSGESNDSKYYSTEVERQIAFADIILL 202
Query: 103 NKIDLVT----ETELGSLTERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVH 158
NKIDL+ E E+ S+ +I+ IN MA + + V +D VL V Y ID
Sbjct: 203 NKIDLLDQNNLEKEIASVESKIRSINPMAKIITTERSKVPLDQVLNVNAY-TPNIDLLKD 261
Query: 159 VDNSHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLI-EEKG 217
N+ HHH++ + ++ H ++++ I + +DLDE W+ L+ +EK
Sbjct: 262 YINNSEKQHHHDNKNDEKSCDQCSN-HSKHINTICITQDFDVDLDEFTRWVGNLLWDEKK 320
Query: 218 EDLYRMKGILSVSGSEQQYVFQGVHSTLDGCP-GKAWGPDEKRINKLVFIGRNLDETALR 276
+ ++R+KG++S+ +++Y+ QGV+ST + P G W +EKR NK+V IG +LD++ L
Sbjct: 321 DSIFRIKGLISIKDDKEKYILQGVYSTFEVLPSGLYWSENEKRHNKIVLIGESLDQSELE 380
Query: 277 KGFK 280
+ FK
Sbjct: 381 ESFK 384
>gi|229011351|ref|ZP_04168542.1| Cobalamin synthesis protein [Bacillus mycoides DSM 2048]
gi|228749868|gb|EEL99702.1| Cobalamin synthesis protein [Bacillus mycoides DSM 2048]
Length = 316
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 161/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E SL
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKESLVH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIETTNCEVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIG+++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGKDINKEWFQEHFEECV 315
>gi|423509939|ref|ZP_17486470.1| hypothetical protein IG3_01436 [Bacillus cereus HuA2-1]
gi|402456171|gb|EJV87949.1| hypothetical protein IG3_01436 [Bacillus cereus HuA2-1]
Length = 316
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + A VD+ +L + + + D H + H H EG
Sbjct: 172 ELQGINPTAKLIEATNCEVDIPSLLQIQTFKTK--------DTLQIYPH---TEHNHLEG 220
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 221 ----------VKSFVLREERPLDLQKLNEWMSAVVQELGEHLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIG+++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGKDINKEWFQEHFQECV 315
>gi|229132893|ref|ZP_04261737.1| Cobalamin synthesis protein [Bacillus cereus BDRD-ST196]
gi|423667730|ref|ZP_17642759.1| hypothetical protein IKO_01427 [Bacillus cereus VDM034]
gi|228650563|gb|EEL06554.1| Cobalamin synthesis protein [Bacillus cereus BDRD-ST196]
gi|401303395|gb|EJS08957.1| hypothetical protein IKO_01427 [Bacillus cereus VDM034]
Length = 316
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + A VD+ +L + + + D H + H H EG
Sbjct: 172 ELQGINPTAKLIEATNCEVDIPSLLQIQTFKTK--------DTLQIYPH---TEHNHLEG 220
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 221 ----------VKSFVLREERPLDLQKLNEWMSAVVQELGEHLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIG+++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGKDINKEWFQEHFQECV 315
>gi|47566800|ref|ZP_00237518.1| low-affinity zinc transport protein [Bacillus cereus G9241]
gi|229155636|ref|ZP_04283744.1| Cobalamin synthesis protein [Bacillus cereus ATCC 4342]
gi|47556429|gb|EAL14762.1| low-affinity zinc transport protein [Bacillus cereus G9241]
gi|228627954|gb|EEK84673.1| Cobalamin synthesis protein [Bacillus cereus ATCC 4342]
Length = 316
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 163/285 (57%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E+E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEESEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + + VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIQSINCDVDIPSLLKIQTF----------------KTKDTLQIYPHTE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIG+++++ ++ FK C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGKDINKEWFQEHFKECV 315
>gi|301053574|ref|YP_003791785.1| cobalamin synthesis protein [Bacillus cereus biovar anthracis str.
CI]
gi|423552228|ref|ZP_17528555.1| hypothetical protein IGW_02859 [Bacillus cereus ISP3191]
gi|300375743|gb|ADK04647.1| cobalamin synthesis protein [Bacillus cereus biovar anthracis str.
CI]
gi|401186170|gb|EJQ93258.1| hypothetical protein IGW_02859 [Bacillus cereus ISP3191]
Length = 316
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 163/285 (57%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E+E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEESEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + + + VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIQSTHCDVDIPSLLKIQTF----------------KTKDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E R++++VFIG+++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEDRVSEVVFIGKDINKEWFQEHFEECV 315
>gi|229085027|ref|ZP_04217279.1| Cobalamin synthesis protein [Bacillus cereus Rock3-44]
gi|228698343|gb|EEL51076.1| Cobalamin synthesis protein [Bacillus cereus Rock3-44]
Length = 319
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 159/285 (55%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 61 MTNGCLCCTVREDLLVALKQLLDVKTEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQA 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
K++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E L
Sbjct: 121 AYKINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADMLLVNKVDLIEEVEKEELLT 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + VD+ +L + + R E++
Sbjct: 175 ELQGINPTAKLIPTINCEVDIPALLEIQTFK-TRDTLEIY-------------------- 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H H H V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 214 PHKEHHHLEGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDRRIVF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIG+++++ ++ FK C+
Sbjct: 274 QGVHTLFAASYDREWQEGEERVSEVVFIGKDINKEWFQEHFKECV 318
>gi|228914640|ref|ZP_04078249.1| Cobalamin synthesis protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228844959|gb|EEM90001.1| Cobalamin synthesis protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 319
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 163/285 (57%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 61 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E+E +L
Sbjct: 121 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEESEKENLLH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + + + VD+ +L + + T + H E
Sbjct: 175 ELQGINPTAKLIQSTHCDVDIPSLLKIQTF----------------KTKDTLQIYPHKE- 217
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 218 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E R++++VFIG+++++ ++ F+ C+
Sbjct: 274 QGVHTLFAASYDREWQEGEDRVSEVVFIGKDINKEWFQEHFEECV 318
>gi|229059719|ref|ZP_04197096.1| Cobalamin synthesis protein [Bacillus cereus AH603]
gi|228719548|gb|EEL71149.1| Cobalamin synthesis protein [Bacillus cereus AH603]
Length = 316
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + A VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIEATNCEVDIPSLLQIQTF----------------KTKDTLQIYPHTE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+NH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --YNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEHLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQEHFQECV 315
>gi|423530102|ref|ZP_17506547.1| hypothetical protein IGE_03654 [Bacillus cereus HuB1-1]
gi|402446617|gb|EJV78475.1| hypothetical protein IGE_03654 [Bacillus cereus HuB1-1]
Length = 316
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E+E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEESEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
I+ IN A + A VD+ +L + + T + H E
Sbjct: 172 EIQGINPTAKLIEATNCEVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E G LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGGYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQEHFEECV 315
>gi|449277490|gb|EMC85635.1| COBW domain-containing protein 1, partial [Columba livia]
Length = 375
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 156/288 (54%), Gaps = 27/288 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ VK + L +++ G+FD+I++ETTGLA P V F D + +
Sbjct: 94 LRNGCLCCSVKDSGVKAIENLMQRR-GKFDYILLETTGLADPGAVASMFWVDSELGSDIY 152
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG++++VD+KH +QHL EVKP +VNEA QVA AD +I+NK DLV+E EL + ++
Sbjct: 153 LDGIVSVVDAKHGLQHLTEVKPEGLVNEACRQVALADLVIINKTDLVSEEELNKVRTSVR 212
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + VD+ VL DL DS + S E
Sbjct: 213 SINGLVKILETQRSRVDLSNVL-----DLHAFDSLSGI-----------SLQKKFEQMKT 256
Query: 182 NHMH-DSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H H D + +VT G + + ++ +++ L+ EK D+ R+KG++S+ G
Sbjct: 257 THAHLDKGIITVTFEVPGNIKEENLNLFIQNLLWEKNIKDKTGCTMDVIRLKGLVSIQGK 316
Query: 233 EQQYVFQGVHSTLD-GCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
Q + QGVH D W DEKR N+LV IGRNLD+ +++ F
Sbjct: 317 SHQVIVQGVHELYDLEETAVEWKEDEKRTNRLVLIGRNLDKETIKEVF 364
>gi|229043813|ref|ZP_04191511.1| Cobalamin synthesis protein [Bacillus cereus AH676]
gi|228725513|gb|EEL76772.1| Cobalamin synthesis protein [Bacillus cereus AH676]
Length = 319
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 161/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 61 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E +L
Sbjct: 121 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKENLLH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
I+ IN A + A VD+ +L + + T + H E
Sbjct: 175 EIQGINPTAKLIEATNCEVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 217
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ +++ VF
Sbjct: 218 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDRVDKRIVF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIGR++++ ++ F+ C+
Sbjct: 274 QGVHTLFAASYDREWQEGEERVSEVVFIGRDINKEWFQEHFEECV 318
>gi|423454469|ref|ZP_17431322.1| hypothetical protein IEE_03213 [Bacillus cereus BAG5X1-1]
gi|423472045|ref|ZP_17448788.1| hypothetical protein IEM_03350 [Bacillus cereus BAG6O-2]
gi|423555218|ref|ZP_17531521.1| hypothetical protein II3_00423 [Bacillus cereus MC67]
gi|401135438|gb|EJQ43035.1| hypothetical protein IEE_03213 [Bacillus cereus BAG5X1-1]
gi|401196622|gb|EJR03560.1| hypothetical protein II3_00423 [Bacillus cereus MC67]
gi|402429510|gb|EJV61595.1| hypothetical protein IEM_03350 [Bacillus cereus BAG6O-2]
Length = 316
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + A VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIEATNCEVDIPSLLQIQTF----------------KTKDTLQIYPHTE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIG+++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGKDINKEWFQEHFEECV 315
>gi|186474843|ref|YP_001856313.1| cobalamin synthesis protein P47K [Burkholderia phymatum STM815]
gi|184191302|gb|ACC69267.1| cobalamin synthesis protein P47K [Burkholderia phymatum STM815]
Length = 362
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 164/307 (53%), Gaps = 31/307 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL ++L LA +KQ FD +VIETTGLA P PV +TF D ++
Sbjct: 63 MSNGCICCTIRGDLARVLGDLAAQKQEGKLDFDRVVIETTGLANPGPVAQTFFMDNQIAD 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD +ITLVD+KH L+E +E V+ QV +ADR+ + K DLV E LG L
Sbjct: 123 EFLLDAIITLVDAKHGNHQLDE-------HEVVQRQVGFADRLFITKSDLVDEAVLGDLR 175
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEVHVDNSHCATHHHESAHG 174
R+ H+N A +++ +G D+ + + G++L ID + ++ H HHH
Sbjct: 176 HRLLHMNPKAQIRVVNFGEADIKEIFDLRGFNLNAKLEIDPDFLAEDEHDHAHHHHDHDH 235
Query: 175 HHEGHHHNHMHDSA-----------------VSSVTIVSEGTLDLDEVDDWLERLIEEKG 217
H+ + NH H + S S+ D ++++D+L +++ G
Sbjct: 236 DHDHANCNHDHGQCDHEGHDHGHHHAHHDDKIKSFVFRSDRPFDPNKLEDFLGGILQIYG 295
Query: 218 EDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRK 277
E L R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG L + +
Sbjct: 296 ERLLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWQPIEKKTNKMVFIGIELPQDLITD 355
Query: 278 GFKGCLA 284
G + CL
Sbjct: 356 GLEACLV 362
>gi|118477469|ref|YP_894620.1| cobalamin synthesis protein [Bacillus thuringiensis str. Al Hakam]
gi|228945664|ref|ZP_04108012.1| Cobalamin synthesis protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229091034|ref|ZP_04222257.1| Cobalamin synthesis protein [Bacillus cereus Rock3-42]
gi|229121599|ref|ZP_04250824.1| Cobalamin synthesis protein [Bacillus cereus 95/8201]
gi|229184257|ref|ZP_04311464.1| Cobalamin synthesis protein [Bacillus cereus BGSC 6E1]
gi|118416694|gb|ABK85113.1| cobalamin synthesis protein [Bacillus thuringiensis str. Al Hakam]
gi|228599053|gb|EEK56666.1| Cobalamin synthesis protein [Bacillus cereus BGSC 6E1]
gi|228661819|gb|EEL17434.1| Cobalamin synthesis protein [Bacillus cereus 95/8201]
gi|228692165|gb|EEL45901.1| Cobalamin synthesis protein [Bacillus cereus Rock3-42]
gi|228814012|gb|EEM60285.1| Cobalamin synthesis protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 319
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 61 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E+E +L
Sbjct: 121 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEESEKENLLH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + + + VD+ +L + + T + H E
Sbjct: 175 ELQGINPTAKLIQSTHCDVDIPSLLKIQTF----------------KTKDTLQIYPHKE- 217
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 218 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E R++++VFIG+++++ + F+ C+
Sbjct: 274 QGVHTLFAASYDREWQEGEDRVSEVVFIGKDINKEWFQAHFEECV 318
>gi|196036781|ref|ZP_03104171.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus W]
gi|196047292|ref|ZP_03114507.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
03BB108]
gi|225863998|ref|YP_002749376.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
03BB102]
gi|300118262|ref|ZP_07056010.1| cobalamin synthesis protein [Bacillus cereus SJ1]
gi|376265913|ref|YP_005118625.1| Putative metal chaperone [Bacillus cereus F837/76]
gi|195990584|gb|EDX54562.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus W]
gi|196021917|gb|EDX60609.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
03BB108]
gi|225788446|gb|ACO28663.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
03BB102]
gi|298724573|gb|EFI65267.1| cobalamin synthesis protein [Bacillus cereus SJ1]
gi|364511713|gb|AEW55112.1| Putative metal chaperone [Bacillus cereus F837/76]
Length = 316
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E+E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEESEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + + + VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIQSTHCDVDIPSLLKIQTF----------------KTKDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E R++++VFIG+++++ + F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEDRVSEVVFIGKDINKEWFQAHFEECV 315
>gi|52143402|ref|YP_083428.1| cobalamin synthesis protein [Bacillus cereus E33L]
gi|51976871|gb|AAU18421.1| cobalamin synthesis protein [Bacillus cereus E33L]
Length = 319
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 61 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E+E L
Sbjct: 121 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEESEKDHLLH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + + + VD+ +L + + T + H E
Sbjct: 175 ELQGINPTAKLIQSTHCDVDIPSLLKIQTF----------------KTKDTLQIYPHKE- 217
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 218 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E R++++VFIG+++++ ++ F+ C+
Sbjct: 274 QGVHTLFAASYDREWQEGEDRVSEVVFIGKDINKEWFQEHFEECV 318
>gi|357487507|ref|XP_003614041.1| COBW domain-containing protein [Medicago truncatula]
gi|355515376|gb|AES96999.1| COBW domain-containing protein [Medicago truncatula]
Length = 370
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 105/287 (36%), Positives = 154/287 (53%), Gaps = 23/287 (8%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CCTV+ LV+ L QL ++K+ + DHI++ETTGLA PAP+ DE + VKLD
Sbjct: 94 NGCICCTVKHSLVQALEQLVQRKE-RLDHILLETTGLANPAPLASILWLDEQLESDVKLD 152
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGS---LTERI 120
++T+VD+K+ L E + EA Q+A+AD +ILNK+DLV+ G+ L E I
Sbjct: 153 SIVTVVDAKNVRFQLKEHRGSSSFPEAYFQIAFADIVILNKVDLVSAEGSGALEELEEEI 212
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
+IN + + + VD+ +L Y D +H A H E+
Sbjct: 213 HNINTLVEIIHSVRCQVDLSKILNRHAY-----------DTAHAA--HLEALLEESRSLS 259
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDL--YRMKGILSVSGSEQQYVF 238
+HDS V ++ I GT+DLD+ WLE ++ EK D+ YR KG+L+V S++ +
Sbjct: 260 TKKLHDSGVRTICICETGTIDLDKTRIWLEEILWEKKYDMDVYRCKGVLNVQNSDELHTL 319
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGR----NLDETALRKGFKG 281
Q V + P + W +E R+NK+VFIG NL E L K
Sbjct: 320 QAVRELYEIVPARKWKKEENRMNKIVFIGNMMSHNLKEDVLINSLKA 366
>gi|187922352|ref|YP_001893994.1| cobalamin synthesis protein P47K [Burkholderia phytofirmans PsJN]
gi|187713546|gb|ACD14770.1| cobalamin synthesis protein P47K [Burkholderia phytofirmans PsJN]
Length = 362
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 112/311 (36%), Positives = 169/311 (54%), Gaps = 35/311 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL ++L LA +KQ FD +VIETTGLA P PV +TF D+ ++
Sbjct: 59 MSNGCICCTIRGDLSRVLGDLAAQKQAGTLDFDRVVIETTGLANPGPVAQTFFMDDQIAN 118
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD +ITLVD+KHA L+E +E V+ QV +ADR+ + K DLV E +L L
Sbjct: 119 EFLLDAIITLVDAKHANHQLDE-------HEVVQRQVGFADRLFITKSDLVDEKQLADLR 171
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEVHVDNSHCATHHHES--- 171
R+ H+N A +K+ +G D+ + + G++L ID + V++ H +H H
Sbjct: 172 HRLLHMNPRAAIKVVNFGEADIKEIFDLRGFNLNSKLEIDPDFLVEDEHAHSHAHAHDEH 231
Query: 172 --------------AHGHHEGHHHNHMHDSA----VSSVTIVSEGTLDLDEVDDWLERLI 213
HEGH H H H + + S ++ D ++++D+L ++
Sbjct: 232 GHTHDDHADCDHDHGKCDHEGHDHAHHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGIL 291
Query: 214 EEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDET 273
+ GE L R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG L +
Sbjct: 292 QIYGERLLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWQPIEKKTNKMVFIGIELPQD 351
Query: 274 ALRKGFKGCLA 284
+ G CLA
Sbjct: 352 LITDGLDACLA 362
>gi|420248483|ref|ZP_14751822.1| putative GTPase, G3E family [Burkholderia sp. BT03]
gi|398068096|gb|EJL59556.1| putative GTPase, G3E family [Burkholderia sp. BT03]
Length = 362
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/309 (34%), Positives = 168/309 (54%), Gaps = 37/309 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL ++L LA +KQ FD +VIETTGLA P PV +TF D ++
Sbjct: 63 MSNGCICCTIRGDLARVLGDLAAQKQEGKVNFDRVVIETTGLANPGPVAQTFFMDNQIAD 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD +ITLVD+KHA L+E +E V+ QV +ADR+ + K DLV E+ LG L
Sbjct: 123 EFLLDAIITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKSDLVDESVLGDLR 175
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
R+ H+N A +++ +G D+ + + G++L +S++ +D A H+ AH H+
Sbjct: 176 HRLLHMNPRAQIRVVNFGEADIKEIFDLRGFNL---NSKLEIDPDFLAEDDHDHAHHDHD 232
Query: 178 GHHHNHMHDSA-----------------------VSSVTIVSEGTLDLDEVDDWLERLIE 214
H + D + S S+ D ++++D+L +++
Sbjct: 233 HDHDHANCDHDHGKCDHEGHDHGHHHHHAHHDDKIKSFVFRSDRPFDPNKLEDFLGGILQ 292
Query: 215 EKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETA 274
GE L R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L +
Sbjct: 293 IYGERLLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWQPIEKKTNKMVFIGIDLPQDL 352
Query: 275 LRKGFKGCL 283
+ G + CL
Sbjct: 353 ITDGLEACL 361
>gi|229096561|ref|ZP_04227532.1| Cobalamin synthesis protein [Bacillus cereus Rock3-29]
gi|229102655|ref|ZP_04233357.1| Cobalamin synthesis protein [Bacillus cereus Rock3-28]
gi|229115535|ref|ZP_04244941.1| Cobalamin synthesis protein [Bacillus cereus Rock1-3]
gi|407704479|ref|YP_006828064.1| HAD-superfamily hydrolase [Bacillus thuringiensis MC28]
gi|423380139|ref|ZP_17357423.1| hypothetical protein IC9_03492 [Bacillus cereus BAG1O-2]
gi|423443171|ref|ZP_17420077.1| hypothetical protein IEA_03501 [Bacillus cereus BAG4X2-1]
gi|423446581|ref|ZP_17423460.1| hypothetical protein IEC_01189 [Bacillus cereus BAG5O-1]
gi|423466255|ref|ZP_17443023.1| hypothetical protein IEK_03442 [Bacillus cereus BAG6O-1]
gi|423535659|ref|ZP_17512077.1| hypothetical protein IGI_03491 [Bacillus cereus HuB2-9]
gi|423539103|ref|ZP_17515494.1| hypothetical protein IGK_01195 [Bacillus cereus HuB4-10]
gi|423545334|ref|ZP_17521692.1| hypothetical protein IGO_01769 [Bacillus cereus HuB5-5]
gi|423624951|ref|ZP_17600729.1| hypothetical protein IK3_03549 [Bacillus cereus VD148]
gi|228667948|gb|EEL23384.1| Cobalamin synthesis protein [Bacillus cereus Rock1-3]
gi|228680758|gb|EEL34933.1| Cobalamin synthesis protein [Bacillus cereus Rock3-28]
gi|228686767|gb|EEL40674.1| Cobalamin synthesis protein [Bacillus cereus Rock3-29]
gi|401131953|gb|EJQ39601.1| hypothetical protein IEC_01189 [Bacillus cereus BAG5O-1]
gi|401175722|gb|EJQ82922.1| hypothetical protein IGK_01195 [Bacillus cereus HuB4-10]
gi|401182802|gb|EJQ89932.1| hypothetical protein IGO_01769 [Bacillus cereus HuB5-5]
gi|401255820|gb|EJR62037.1| hypothetical protein IK3_03549 [Bacillus cereus VD148]
gi|401630891|gb|EJS48688.1| hypothetical protein IC9_03492 [Bacillus cereus BAG1O-2]
gi|402413172|gb|EJV45519.1| hypothetical protein IEA_03501 [Bacillus cereus BAG4X2-1]
gi|402415687|gb|EJV48008.1| hypothetical protein IEK_03442 [Bacillus cereus BAG6O-1]
gi|402461712|gb|EJV93424.1| hypothetical protein IGI_03491 [Bacillus cereus HuB2-9]
gi|407382164|gb|AFU12665.1| Cobalamin synthesis protein [Bacillus thuringiensis MC28]
Length = 316
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + F+ +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFEGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E+E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEESEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + A VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIEATNCEVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W EKR++++VFIG+++++ ++ F C+
Sbjct: 271 QGVHTLFAASYDREWQEGEKRVSEVVFIGKDINKEWFQEHFGECV 315
>gi|42781167|ref|NP_978414.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
ATCC 10987]
gi|42737089|gb|AAS41022.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
ATCC 10987]
Length = 316
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 161/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E+E +L
Sbjct: 118 AYQINGVVTVVDSYHIYKHFEKGL------EAKEQIAFADVVLVNKLDLIEESEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + + VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIQSTNCDVDIPSLLQIQTF----------------KTKDTLQIYPHTE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHLE--GVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E R++++VFIG+++++ + F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEDRVSEVVFIGKDINKEWFQAHFEECV 315
>gi|209521417|ref|ZP_03270127.1| cobalamin synthesis protein P47K [Burkholderia sp. H160]
gi|209498135|gb|EDZ98280.1| cobalamin synthesis protein P47K [Burkholderia sp. H160]
Length = 364
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 111/316 (35%), Positives = 166/316 (52%), Gaps = 43/316 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL ++L LA KKQ FD IVIETTGLA P PV +TF D+ ++
Sbjct: 59 MSNGCICCTIRGDLSRVLNDLAAKKQAGELDFDRIVIETTGLANPGPVAQTFFMDDQIAS 118
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD +ITLVD+KHA L+E +E V+ QV +ADR+ + K DLV E ++ L
Sbjct: 119 EFLLDAIITLVDAKHANYQLDE-------HEVVQRQVGFADRLFITKADLVDEQDVADLR 171
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
R+ H+N A +K+ +G ++ + + G++L +S++ +D A H +H H
Sbjct: 172 HRLLHMNPKAAIKVVNFGEAEIKEIFDLRGFNL---NSKLEIDPDFLAEEEHAHSHAHAH 228
Query: 178 G---------------HHHNH--------------MHDSAVSSVTIVSEGTLDLDEVDDW 208
H H H HD + S S+ D ++++D+
Sbjct: 229 DKHGHTHGDHDHDNCDHEHGHCDHEGHDHGHHHHAHHDDKIKSFVYRSDRPFDPNKLEDF 288
Query: 209 LERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGR 268
L +++ GE L R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG
Sbjct: 289 LGGILQIYGEHLLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWQPAEKKTNKMVFIGI 348
Query: 269 NLDETALRKGFKGCLA 284
L + G CLA
Sbjct: 349 ELPRDLITDGLDACLA 364
>gi|357122105|ref|XP_003562756.1| PREDICTED: COBW domain-containing protein 1-like [Brachypodium
distachyon]
Length = 364
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 156/281 (55%), Gaps = 17/281 (6%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CCTV+ LV+ L QL + K+ + DHI++ETTGLA PAP++ D+ + ++LD
Sbjct: 97 NGCVCCTVKHSLVQALEQLVQSKE-RMDHILLETTGLADPAPLVSILWLDDQLESSIRLD 155
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIKHI 123
+IT++D+K+ Q ++E EA Q+A+AD +ILNKIDLV + +L L ++I +
Sbjct: 156 SIITVIDAKNFRQQIDEHTNSSSFPEAFHQIAFADVVILNKIDLVKD-DLEDLEKQIHDV 214
Query: 124 NAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHHNH 183
NA+ V + VD++ + Y + + + + + N
Sbjct: 215 NALVTVVRSVRCQVDLNTIFDRQAYGTKN-------------SSQLQELLEYSKSVPPNS 261
Query: 184 MHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGE--DLYRMKGILSVSGSEQQYVFQGV 241
HD+++S++ I + + L +V+ WLE L+ EK D+YR KGIL + S Q + Q V
Sbjct: 262 RHDNSISTLCISEQDPVHLAKVESWLEDLLWEKKSTMDIYRCKGILHIHNSNQLHTLQAV 321
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
+ P + W + R+NK+VFIGRNLD + L+ F C
Sbjct: 322 REVYEVVPAREWSEMQSRMNKIVFIGRNLDISVLQDSFGRC 362
>gi|190893467|ref|YP_001980009.1| cobalamin synthesis protein, P47K family [Rhizobium etli CIAT 652]
gi|417107773|ref|ZP_11962654.1| putative cobalamin synthesis protein, P47K family [Rhizobium etli
CNPAF512]
gi|190698746|gb|ACE92831.1| putative cobalamin synthesis protein, P47K family [Rhizobium etli
CIAT 652]
gi|327189538|gb|EGE56691.1| putative cobalamin synthesis protein, P47K family [Rhizobium etli
CNPAF512]
Length = 365
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 167/309 (54%), Gaps = 38/309 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 67 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI LVD+KH L + + EA +Q+A+AD +++NK DLV+ EL + + ++
Sbjct: 126 LDAVIALVDAKHLPLRLKDSR------EAEDQIAFADVVVINKSDLVSAEELDVIEDIVR 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHES---------- 171
IN A V VD+ VL G ++LER ++ H H H+
Sbjct: 180 AINPAARVYKTSRSGVDLARVLDQGAFNLER----ALENDPHFLEHGHDDHVCGPDCDHH 235
Query: 172 ----------------AHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEE 215
HGHH + +HD V SV++ G ++ + W++++ +
Sbjct: 236 HHDHQHDDHDHHHHDHDHGHHHHGAMSAIHDVTVQSVSLRG-GEMNAERFFPWIQKVTQI 294
Query: 216 KGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETAL 275
+G ++ R+KGI++ ++YV QGVH ++G + W EK ++LVFIGR+LD L
Sbjct: 295 QGPNILRLKGIIAFKDDPERYVVQGVHMIIEGDHQRPWKDGEKHESRLVFIGRDLDREKL 354
Query: 276 RKGFKGCLA 284
FK C A
Sbjct: 355 EASFKACEA 363
>gi|116253885|ref|YP_769723.1| cobalamin synthesis protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115258533|emb|CAK09637.1| putative cobalamin synthesis protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 372
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 168/312 (53%), Gaps = 37/312 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 67 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +I+NK DLVT EL + + ++
Sbjct: 126 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVIINKSDLVTPEELDVIEDIVR 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHV-----DNSHCATHHHESAHGH 175
IN A V VD+ VL G ++LER ++++ H D+ C H H
Sbjct: 180 AINPAARVYKTSRSGVDLARVLDQGAFNLERALENDPHFLEHGHDDHVCGPDCDHDHHRH 239
Query: 176 HEGHHH-----------------------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERL 212
H H + +HD V SV++ G ++ + W++++
Sbjct: 240 DHDHDHHGHQHDDHGHDHHHHGAHNHGAMSAIHDVTVQSVSLRG-GEMNPERFFPWIQKI 298
Query: 213 IEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDE 272
+ +G ++ R+KGI++ ++YV QGVH ++G + W EK ++LVFIGR LD
Sbjct: 299 TQTQGPNILRLKGIIAFKDDPERYVVQGVHMIIEGDHQRPWKEGEKHESRLVFIGRELDR 358
Query: 273 TALRKGFKGCLA 284
L FK C A
Sbjct: 359 EKLETSFKACEA 370
>gi|423391664|ref|ZP_17368890.1| hypothetical protein ICG_03512 [Bacillus cereus BAG1X1-3]
gi|401637497|gb|EJS55250.1| hypothetical protein ICG_03512 [Bacillus cereus BAG1X1-3]
Length = 316
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 163/285 (57%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ ++E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEKSEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + A VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIEATNCDVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIG+++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGKDINKEWFQEHFEECV 315
>gi|121611465|ref|YP_999272.1| cobalamin synthesis protein, P47K [Verminephrobacter eiseniae
EF01-2]
gi|121556105|gb|ABM60254.1| cobalamin synthesis protein, P47K [Verminephrobacter eiseniae
EF01-2]
Length = 356
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 109/301 (36%), Positives = 160/301 (53%), Gaps = 25/301 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQG--QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CCT+R DL L LA KK+QG F+ IVIETTGLA P PV +TF D+ V+Q
Sbjct: 61 MNNGCICCTIREDLRATLQLLASKKRQGLLDFERIVIETTGLADPGPVAQTFFMDDEVAQ 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+D +ITLVD+KHA LN+ + EA QV +AD+I L+K DLV+ E +L +
Sbjct: 121 SCLIDAIITLVDAKHATGQLNDRQ------EARRQVGFADQIFLSKTDLVSAEETRALIQ 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLER---IDSEVHVDNSHCATHHHESAHGH 175
R+KH+N AP++ +G+V + VL + G++L ID + + H H
Sbjct: 175 RLKHMNPRAPIQAVHFGAVPIGQVLDLRGFNLHAKLDIDPDFLSEQDAHGHGHEHEHEHH 234
Query: 176 HEGHHHNHMHDSA-------------VSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYR 222
H + H S V S SE D ++D+L ++ G + R
Sbjct: 235 EHAHGAHCDHPSHQHGGPGHHHHDDDVKSFVFRSERPFDPARLEDFLGAMVNVYGPRMLR 294
Query: 223 MKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
KG+L + G++++ +FQGVH + G W E R +K+VFIG +L +G +
Sbjct: 295 YKGVLQMKGTDRKVIFQGVHQLMGSDLGPQWADGEARTSKMVFIGIDLPRDIFLQGLEQS 354
Query: 283 L 283
L
Sbjct: 355 L 355
>gi|71895319|ref|NP_001026607.1| COBW domain-containing protein 1 [Gallus gallus]
gi|53132275|emb|CAG31889.1| hypothetical protein RCJMB04_13c10 [Gallus gallus]
Length = 370
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 160/288 (55%), Gaps = 27/288 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + VK + L +K+ G+FD+I++ETTGLA P V F D + +
Sbjct: 89 LRNGCLCCSVKDNGVKAIENLMQKR-GKFDYILLETTGLADPGAVASMFWVDSELGSDIY 147
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG++++VD+KH +QHL E KP +VNEA QVA AD II+NK DLV+ EL + ++
Sbjct: 148 LDGIVSVVDAKHGLQHLTEEKPEGLVNEAARQVALADLIIINKTDLVSGEELNKVRASVR 207
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + ++N A
Sbjct: 208 SINGLVKILETQRSRVDLSNVLDLHAFDSLSGISLQKKLENMKTA--------------- 252
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H H+ D + +VT G + + ++ +++ L+ EK D+ R+KG++S+ G
Sbjct: 253 HAHL-DKGIVTVTFEVLGNIKEENLNLFIQNLLWEKNVKDKTGRTMDVIRLKGLVSIQGK 311
Query: 233 EQQYVFQGVHSTLD-GCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
Q + QGVH D AW DEKR N+LV IGRNL++ +++ F
Sbjct: 312 SHQVIVQGVHELYDLEETAVAWKEDEKRTNRLVLIGRNLNKEIIKEVF 359
>gi|229017357|ref|ZP_04174260.1| Cobalamin synthesis protein [Bacillus cereus AH1273]
gi|229023533|ref|ZP_04180029.1| Cobalamin synthesis protein [Bacillus cereus AH1272]
gi|228737801|gb|EEL88301.1| Cobalamin synthesis protein [Bacillus cereus AH1272]
gi|228743920|gb|EEL94019.1| Cobalamin synthesis protein [Bacillus cereus AH1273]
Length = 319
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 163/285 (57%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 61 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ ++E +L
Sbjct: 121 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEKSEKENLLH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + A VD+ +L + + T + H E
Sbjct: 175 ELQGINPTAKLIEATNCDVDIPSLLQIQTF----------------KTKDTLQIYPHKE- 217
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 218 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIG+++++ ++ F+ C+
Sbjct: 274 QGVHTLFAASYDREWQEGEERVSEVVFIGKDINKEWFQEHFEECV 318
>gi|257092527|ref|YP_003166168.1| cobalamin synthesis protein P47K [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045051|gb|ACV34239.1| cobalamin synthesis protein P47K [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 355
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 154/284 (54%), Gaps = 10/284 (3%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CCTV DLV+ L LA ++ FD I+IETTGLA P V +TF +
Sbjct: 65 LTNGCVCCTVNADLVRGLQDLAAQRASGRLSFDWILIETTGLADPGAVAQTFFAAPELRD 124
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG++ +VD+ HA Q L++ VV QV +ADR++L K DLV + L+E
Sbjct: 125 DFMLDGIVVVVDALHAGQQLDQHP---VVQR---QVGFADRLLLAKCDLVDPAAIVELSE 178
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP + + G + +LG+GG++L+ + A +A
Sbjct: 179 RLHGINPRAPQQSLQQGRAEPGSLLGIGGFNLDSSLLAADSGSPSPARFVPVTAPAGVRW 238
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+HD +SS ++ G +DLD + +++ LI+E G++L R KGIL++ +++ +F
Sbjct: 239 SRRAAVHDDEISSF-LLEAGEVDLDRIGTFVQSLIDELGDELLRYKGILAIPDEDRKLIF 297
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
QGV G+ W P E R +++V IG+ L E LR+ F+G
Sbjct: 298 QGVQRVAGFDYGEVWAPGETRTSRIVLIGKRLPEARLREAFRGA 341
>gi|228927115|ref|ZP_04090178.1| Cobalamin synthesis protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228832441|gb|EEM78015.1| Cobalamin synthesis protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 319
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 161/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 61 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E+E +L
Sbjct: 121 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEESEKENLLH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + + VD+ +L + + T + H E
Sbjct: 175 ELQGINPTAKLIQSTNCDVDIPSLLKIQTF----------------KTKDTLQIYPHTE- 217
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 218 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E R++++VFIG+++++ + F+ C+
Sbjct: 274 QGVHTLFAASYDREWQEGEDRVSEVVFIGKDINKEWFQAHFEECV 318
>gi|423481913|ref|ZP_17458603.1| hypothetical protein IEQ_01691 [Bacillus cereus BAG6X1-2]
gi|401145121|gb|EJQ52648.1| hypothetical protein IEQ_01691 [Bacillus cereus BAG6X1-2]
Length = 316
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 161/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E+E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIDESEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIETTNCEVDISSLLQIQTF----------------KTKDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIG+ +++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGKGINKEWFQEHFEECV 315
>gi|390569622|ref|ZP_10249907.1| cobalamin synthesis protein P47K [Burkholderia terrae BS001]
gi|389938482|gb|EIN00326.1| cobalamin synthesis protein P47K [Burkholderia terrae BS001]
Length = 364
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 168/311 (54%), Gaps = 39/311 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL ++L LA +KQ FD +VIETTGLA P PV +TF D ++
Sbjct: 63 MSNGCICCTIRGDLARVLGDLAAQKQEGKVDFDRVVIETTGLANPGPVAQTFFMDNQIAD 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD +ITLVD+KHA L+E +E V+ QV +ADR+ + K DLV E+ LG L
Sbjct: 123 EFLLDAIITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKSDLVDESVLGDLR 175
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
R+ H+N A +++ +G D+ + + G++L +S++ +D A H+ AH H+
Sbjct: 176 HRLLHMNPRAQIRVVNFGEADIKEIFDLRGFNL---NSKLEIDPDFLAEDDHDHAHHDHD 232
Query: 178 GHHHNHMHDSA-------------------------VSSVTIVSEGTLDLDEVDDWLERL 212
H + + + S S+ D ++++D+L +
Sbjct: 233 HDHDHDHANCDHDHGECDHEGHDHGHHHHHAHHDDKIKSFVFRSDRPFDPNKLEDFLGGI 292
Query: 213 IEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDE 272
++ GE L R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L +
Sbjct: 293 LQIYGERLLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWQPIEKKTNKMVFIGIDLPQ 352
Query: 273 TALRKGFKGCL 283
+ G + CL
Sbjct: 353 DLITDGLEACL 363
>gi|323524459|ref|YP_004226612.1| cobalamin synthesis protein P47K [Burkholderia sp. CCGE1001]
gi|323381461|gb|ADX53552.1| cobalamin synthesis protein P47K [Burkholderia sp. CCGE1001]
Length = 365
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 168/316 (53%), Gaps = 44/316 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL ++L LA +KQ FD +VIETTGLA P PV +TF D+ ++
Sbjct: 59 MSNGCICCTIRGDLSRVLGDLAAQKQSGTLDFDRVVIETTGLANPGPVAQTFFMDDQIAN 118
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD +ITLVD+KHA L+E +E V+ QV +ADR+ + K DLV E +LG L
Sbjct: 119 EFLLDAIITLVDAKHANHQLDE-------HEVVQRQVGFADRLFITKSDLVDEQQLGDLR 171
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCA------------ 165
R+ H+N A +K+ +G D+ + + G++L +S++ +D A
Sbjct: 172 HRLLHMNPKAAIKVVNFGEADIKEIFDLRGFNL---NSKLEIDPDFLAEDEHAHSHAHAH 228
Query: 166 ------------THHHESAHGHHEGHHHNHMHDSA------VSSVTIVSEGTLDLDEVDD 207
+ + HGH + H+H H + S ++ D ++++D
Sbjct: 229 DEHGHTHDHDHDHANCDHDHGHCDHEGHDHGHRHHAHHDDKIKSFVYRNDRPFDPNKLED 288
Query: 208 WLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIG 267
+L +++ GE L R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG
Sbjct: 289 FLGGILQIYGERLLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWQPAEKKTNKMVFIG 348
Query: 268 RNLDETALRKGFKGCL 283
L + + G CL
Sbjct: 349 IELPQDLITDGLDACL 364
>gi|206975137|ref|ZP_03236051.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
H3081.97]
gi|217959535|ref|YP_002338087.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
AH187]
gi|222095678|ref|YP_002529735.1| cobalamin synthesis protein/p47k family protein [Bacillus cereus
Q1]
gi|229138761|ref|ZP_04267342.1| Cobalamin synthesis protein [Bacillus cereus BDRD-ST26]
gi|375284043|ref|YP_005104481.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
NC7401]
gi|402557702|ref|YP_006598973.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
FRI-35]
gi|423356071|ref|ZP_17333694.1| hypothetical protein IAU_04143 [Bacillus cereus IS075]
gi|423372034|ref|ZP_17349374.1| hypothetical protein IC5_01090 [Bacillus cereus AND1407]
gi|423569031|ref|ZP_17545277.1| hypothetical protein II7_02253 [Bacillus cereus MSX-A12]
gi|423576226|ref|ZP_17552345.1| hypothetical protein II9_03447 [Bacillus cereus MSX-D12]
gi|423606180|ref|ZP_17582073.1| hypothetical protein IIK_02761 [Bacillus cereus VD102]
gi|206746558|gb|EDZ57951.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
H3081.97]
gi|217063722|gb|ACJ77972.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
AH187]
gi|221239736|gb|ACM12446.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
Q1]
gi|228644677|gb|EEL00928.1| Cobalamin synthesis protein [Bacillus cereus BDRD-ST26]
gi|358352569|dbj|BAL17741.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
NC7401]
gi|401080537|gb|EJP88824.1| hypothetical protein IAU_04143 [Bacillus cereus IS075]
gi|401100210|gb|EJQ08206.1| hypothetical protein IC5_01090 [Bacillus cereus AND1407]
gi|401207222|gb|EJR14001.1| hypothetical protein II9_03447 [Bacillus cereus MSX-D12]
gi|401207815|gb|EJR14593.1| hypothetical protein II7_02253 [Bacillus cereus MSX-A12]
gi|401242271|gb|EJR48647.1| hypothetical protein IIK_02761 [Bacillus cereus VD102]
gi|401798912|gb|AFQ12771.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
FRI-35]
Length = 316
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 161/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E+E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEESEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + + VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIQSTNCDVDIPSLLQIQTF----------------KTKDTLQIYPHTE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E R++++VFIG+++++ + F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEDRVSEVVFIGKDINKEWFQAHFEECV 315
>gi|334130241|ref|ZP_08504041.1| Putative GTPase [Methyloversatilis universalis FAM5]
gi|333444706|gb|EGK72652.1| Putative GTPase [Methyloversatilis universalis FAM5]
Length = 344
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 160/288 (55%), Gaps = 19/288 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCTV+G+L L L A++ G+ FD +++ETTGLA PAPV++TF D+ + +
Sbjct: 64 LSNGCICCTVQGELGDALAGLLARRDAGELAFDRLIVETTGLADPAPVVQTFFNDDRLRE 123
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+LDGV+T+VD+ H + A QVA+ADR++++ DLVT L L
Sbjct: 124 RYRLDGVVTVVDAVHFDGQFRRER------VAASQVAFADRLLISHADLVTPEALYELCT 177
Query: 119 RIKHINAMAPVKLAKYGSVDMDF--VLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHH 176
R++ +NA AP+ +A GS D D+ + + G+ L+ + + V H + S
Sbjct: 178 RLQRVNARAPLIVA--GSPDEDWRDLFSIKGFSLD--ERGLPVRGWHPVSPRAISGIAGM 233
Query: 177 EGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQY 236
D AV S+ + + LDLD V +++ LI E DL R KGILS+ G ++
Sbjct: 234 A----RKSWDDAVGSLLLECDTPLDLDRVGAFVDTLIAEHSVDLLRYKGILSIEGEPRKL 289
Query: 237 VFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+FQGVH G+ W P E R +++V IGRNL ALR F +A
Sbjct: 290 IFQGVHRIAGFDYGRNWEPGESRQSRIVLIGRNLPADALRARFFATVA 337
>gi|224091329|ref|XP_002196540.1| PREDICTED: COBW domain-containing protein 1 isoform 1 [Taeniopygia
guttata]
Length = 368
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 158/287 (55%), Gaps = 25/287 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + VK + L +++ G+FD+I++ETTGLA P V F D + +
Sbjct: 87 LRNGCLCCSVKDNGVKAIENLMQRR-GKFDYILLETTGLADPGAVASMFWVDSELGSDIY 145
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG++++VD+KH +QHL E KP ++NEA QVA AD II+NK DLV+E EL + ++
Sbjct: 146 LDGIVSVVDAKHGLQHLTEEKPEGLINEASRQVALADLIIINKTDLVSEEELNKVRTSVR 205
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + VD+ VL DL DS V + H ++ H
Sbjct: 206 SINGFVKILETQRSRVDLSNVL-----DLHAFDSLSGV-SLQKKLEHVKTTQAH------ 253
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
D A+ +VT G + + ++ +++ L+ EK D+ R+KG++S+ G
Sbjct: 254 ---LDKAIITVTFDIPGNIKEENLNLFIQNLLWEKNVKDKTGCTMDVIRLKGLVSIQGKS 310
Query: 234 QQYVFQGVHSTLD-GCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
Q + QGVH D AW DEKR N+LV IGRNLD+ +++ F
Sbjct: 311 HQVIVQGVHELYDLEETSVAWKEDEKRTNRLVLIGRNLDKEIIKEVF 357
>gi|409439100|ref|ZP_11266162.1| putative cobalamin synthesis protein, P47K family [Rhizobium
mesoamericanum STM3625]
gi|408749217|emb|CCM77340.1| putative cobalamin synthesis protein, P47K family [Rhizobium
mesoamericanum STM3625]
Length = 366
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 168/305 (55%), Gaps = 30/305 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 68 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 126
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL + + +
Sbjct: 127 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPEELAQIEDIVH 180
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVH---------VDNSHCATHHHES 171
IN A V VD+ VL G ++LER ++++ H V C HH
Sbjct: 181 AINPSARVYKTSRSGVDLARVLDQGAFNLERALENDPHFLDHDHDDHVCGPDCDHDHHHH 240
Query: 172 AHGHHEGHHH------------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGED 219
HGH H H + +HD V SV++ G ++ + W++++ + +G +
Sbjct: 241 HHGHDHDHDHDHDHDHHHHGAMSPIHDVTVQSVSLRG-GEMNPERFFPWIQKITQTQGPN 299
Query: 220 LYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
+ R+KGI++ ++YV QGVH ++G + W EK +LVFIGR LD L F
Sbjct: 300 ILRLKGIIAFKDDPERYVVQGVHMIVEGDHQRPWREGEKHETRLVFIGRELDREKLEASF 359
Query: 280 KGCLA 284
+ C A
Sbjct: 360 RACEA 364
>gi|228985151|ref|ZP_04145318.1| Cobalamin synthesis protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228774638|gb|EEM23037.1| Cobalamin synthesis protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 316
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E+E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEESEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + + VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIQSINCDVDIPSLLKIQTF----------------KTKDTLQIYPHTE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E R++++VFIG+++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEDRVSEVVFIGKDINKEWFQEHFEECV 315
>gi|298710215|emb|CBJ26290.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 472
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 173/360 (48%), Gaps = 82/360 (22%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGC+CC V+ DLV L L +++ +FD+++IETTGLA P PV F DE + ++
Sbjct: 114 LRNGCICCAVKDDLVTTLEMLLQRRN-KFDYVIIETTGLANPGPVASVFWLDEALESALR 172
Query: 62 LDGVITLVDSKHAMQHLNEV-----------------KPRFVVNEAVEQVAYADRIILNK 104
LD ++TLVD+K+ ++ L V +P+ NEA QVAYADR+++NK
Sbjct: 173 LDSIVTLVDAKNFVRQLQRVPGEGAEAGAEGEEQSGKRPK---NEAAMQVAYADRVLINK 229
Query: 105 IDLVTETELGSLTERIKHINAMAPVKLAKYGSVDMDFVLGV------------------- 145
DLV+ L + R++ INA+A V+ K +VD+ ++L
Sbjct: 230 SDLVSTETLDDVVGRVRTINALAEVRCTKRSAVDLAWILDTECFSSELAAALDPSLAPPR 289
Query: 146 ----------GGYDLERIDSEVHVDNS-----HCATHHHESAHGHHEGHHHN-------- 182
GG D + S H +H E + GH E HH+
Sbjct: 290 ALLGTAQQNEGGRGSSAADRGIARTGSGPGDAHVHSHDVEPSGGHTESVHHHADGEACDE 349
Query: 183 ------------HMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK---GEDLYRMKGIL 227
+HD +V++ + G+LDL ++ WL L+ + G ++YR+KG++
Sbjct: 350 CAAAEGPGGTACSVHDPSVTTCAVDLPGSLDLSRLERWLGGLLWDPPPGGTEVYRVKGVV 409
Query: 228 SVSGSEQQYVFQGVHSTLDGCP----GKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
SV G ++++V QGV + P G AW E R K+VFIGR L L G + C+
Sbjct: 410 SVEGRDERFVVQGVADLFEVTPAEVVGSAWQEGEARRCKVVFIGRLLSSRDLELGIRSCM 469
>gi|241206368|ref|YP_002977464.1| cobalamin synthesis protein P47K [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860258|gb|ACS57925.1| cobalamin synthesis protein P47K [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 367
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/307 (34%), Positives = 168/307 (54%), Gaps = 32/307 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 67 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +I+NK DLVT EL + + ++
Sbjct: 126 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVIINKSDLVTPEELDVIEDIVR 179
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVHV-----DNSHCAT--------- 166
IN A V VD+ VL G ++LER ++++ H D+ C
Sbjct: 180 AINPAARVYKTSRSGVDLARVLDQGAFNLERALENDPHFLEHGHDDHVCGPDCDHDHHHH 239
Query: 167 ---------HHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG 217
H HG H+ + +HD V SV++ ++ + W++++ + +G
Sbjct: 240 DHDHQHGDHGHDHHHHGAHQHGAMSAIHDVTVQSVSLRG-AEMNPERFFPWIQKVTQTQG 298
Query: 218 EDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRK 277
++ R+KGI++ ++YV QGVH ++G + W EK ++LVFIGR LD L
Sbjct: 299 PNILRLKGIIAFKDDPERYVVQGVHMIIEGDHQRPWKEGEKHESRLVFIGRELDREKLEA 358
Query: 278 GFKGCLA 284
FK C A
Sbjct: 359 SFKACEA 365
>gi|228933349|ref|ZP_04096204.1| Cobalamin synthesis protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228826305|gb|EEM72083.1| Cobalamin synthesis protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 319
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 61 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E+E +L
Sbjct: 121 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEESEKENLLH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + + + VD+ +L + + T + H E
Sbjct: 175 ELQGINPTAKLIQSTHCDVDIPSLLKIQTF----------------KTKDTLQIYPHKE- 217
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 218 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W + R++++VFIG+++++ + F+ C+
Sbjct: 274 QGVHTLFAASYDREWQEGKDRVSEVVFIGKDINKEWFQAHFEECV 318
>gi|333902138|ref|YP_004476011.1| cobalamin synthesis protein P47K [Pseudomonas fulva 12-X]
gi|333117403|gb|AEF23917.1| cobalamin synthesis protein P47K [Pseudomonas fulva 12-X]
Length = 321
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 159/280 (56%), Gaps = 31/280 (11%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIET-FCTDELVSQY 59
NGC+CC++ +L K L L +K+ FD +VIE TGLA PAPV +T F T+EL +Y
Sbjct: 64 NGCVCCSIHVELEKALFVLLEKRDSGELDFDRLVIECTGLADPAPVAQTFFATEELCERY 123
Query: 60 VKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
V LDG+ITLVD+ +A +HL E A QV +ADRI+L+K DLV + +L R
Sbjct: 124 V-LDGIITLVDAVNADRHLQETI-------AQAQVGFADRILLSKTDLVDDAAREALAAR 175
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGH 179
++ IN AP+++ ++G +D+ +L V G++L N+ A G
Sbjct: 176 LQRINRRAPIRVVEHGRIDLSELLDVRGFNL----------NADVAPSLRPVMAGKSSDR 225
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQ 239
++++ + + LDLD + ++E L+E+ G L R KG+LS++G +++ VFQ
Sbjct: 226 ---------IATLVLTGDKPLDLDRLSGFMENLLEQHGNSLLRYKGVLSIAGEDRRMVFQ 276
Query: 240 GVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
GV WG DEKR + +VFIG NL E A+R+GF
Sbjct: 277 GVLRLYGFDWDSEWGADEKRESVIVFIGDNLPEEAIRQGF 316
>gi|229196281|ref|ZP_04323029.1| Cobalamin synthesis protein [Bacillus cereus m1293]
gi|228587135|gb|EEK45205.1| Cobalamin synthesis protein [Bacillus cereus m1293]
Length = 316
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E+E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEESEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN VKL + + D+D L +I + D H + H H EG
Sbjct: 172 ELQGIN--PTVKLIQSTNCDVDIP------SLLQIQTFKTKDTLQIYPH---TEHNHLEG 220
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 221 ----------VKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E R++++VFIG+++++ + F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEDRVSEVVFIGKDINKEWFQAHFEECV 315
>gi|351730465|ref|ZP_08948156.1| cobalamin synthesis protein P47K [Acidovorax radicis N35]
Length = 354
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 168/302 (55%), Gaps = 29/302 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQG--QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DL + L L AK+++G F+ IVIETTG+A P PV +TF DE +++
Sbjct: 61 MSNGCICCTIREDLRETLQLLGAKRRKGLLDFERIVIETTGVADPGPVAQTFFMDEEIAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+D +ITLVD+KHA Q LN+ + EA QV +AD+I L+K DLV+ E +L
Sbjct: 121 TYLIDSIITLVDAKHAPQQLNDRQ------EARRQVGFADQIFLSKTDLVSAEETDALIH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHC-----------ATH 167
R+KH+N AP+K +G V + VL + G++L ++++ +D
Sbjct: 175 RLKHMNPRAPIKAVHFGEVPLQEVLDLRGFNL---NAKLDIDPDFLKEEEAHGHEHHDHD 231
Query: 168 HHESAHGHHEGHH------HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLY 221
H + H H H+H HD V S S+ D +++D+L ++ G +
Sbjct: 232 HAHGEYCDHPSHQHDHGHGHHHHHDDDVKSFVYRSDRPFDPAKLEDFLGAIVNIYGPRML 291
Query: 222 RMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
R KG+L++ G+E++ +FQGVH + G W E R +K+VFIG +L + +G +
Sbjct: 292 RYKGVLNMKGTERKVIFQGVHQLMGSDLGPQWAEGEPRTSKMVFIGIDLPKDIFLQGLEQ 351
Query: 282 CL 283
L
Sbjct: 352 SL 353
>gi|326491123|dbj|BAK05661.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 364
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 156/281 (55%), Gaps = 17/281 (6%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CCTV+ LV+ L QL + K+ + DHI++ETTGLA PAP++ D+ + ++LD
Sbjct: 97 NGCVCCTVKHSLVQALEQLVQTKE-RMDHILLETTGLADPAPLVSILWLDDQLESSIRLD 155
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIKHI 123
+IT++D+K+ + ++E EA Q+A+AD +ILNKIDLV + +L L +I +
Sbjct: 156 SIITVIDAKNFRRQIDEHTNSSSFPEAFHQIAFADVVILNKIDLVKD-DLEDLERQIHDV 214
Query: 124 NAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHHNH 183
N + V + VD++ + Y V NS E + + N
Sbjct: 215 NELVTVVRSVRCQVDLNTIFDRQAYG---------VKNSSQLQELLE----YSKSAPPNS 261
Query: 184 MHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGE--DLYRMKGILSVSGSEQQYVFQGV 241
HD+++S++ I + ++L +V+ WLE L+ EK D+YR KGIL + S Q + Q V
Sbjct: 262 RHDNSISTLCIHEQDPVNLAKVESWLEDLLWEKKSNMDIYRCKGILKIHNSNQLHTLQAV 321
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
+ P + W + R+NK+VFIGR+LD + L+ F C
Sbjct: 322 REVYEVVPAREWSETQPRMNKIVFIGRDLDISTLQDSFSRC 362
>gi|398803211|ref|ZP_10562317.1| putative GTPase, G3E family [Polaromonas sp. CF318]
gi|398097090|gb|EJL87402.1| putative GTPase, G3E family [Polaromonas sp. CF318]
Length = 353
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/298 (37%), Positives = 170/298 (57%), Gaps = 22/298 (7%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQG--QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CC++R DL + L L AKK++G FD +VIETTGLA P PV +TF DE V++
Sbjct: 61 MNNGCICCSIREDLRETLQLLAAKKRKGLLDFDRVVIETTGLADPGPVAQTFFMDEEVAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD ++TLVD+KHA LN+ + EA QV +AD+I ++K DLV + E+ +L
Sbjct: 121 QYLLDSILTLVDAKHAAGQLNDRQ------EARRQVGFADQIFISKSDLVAKDEVDALMH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLER---IDSEVHVDNSHCATH-------- 167
R+KH+N AP +G V + V + G++L ID + ++ H
Sbjct: 175 RLKHMNPRAPQTAVHFGEVAIKDVFDLRGFNLNAKLDIDPDFLKEDEHAGHDHDHEHGEH 234
Query: 168 --HHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKG 225
H AH HEGH H+H HD V S S+ +++D+L ++ G + R KG
Sbjct: 235 CDHPSHAHDGHEGHGHHHHHDDDVKSFVFRSDKAFSPAKLEDFLGAVVNIYGPRMLRYKG 294
Query: 226 ILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+L++ G++++ +FQGVH + G AW EK+ +K+VFIG +L + +G + CL
Sbjct: 295 VLNMEGTDRKVIFQGVHQLMGSDLGPAWAEGEKKNSKMVFIGIDLPKDIFVQGLEQCL 352
>gi|196039817|ref|ZP_03107121.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
NVH0597-99]
gi|196029520|gb|EDX68123.1| cobalamin synthesis protein/P47K family protein [Bacillus cereus
NVH0597-99]
Length = 316
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 161/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEENEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + + VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIQSINCDVDIPSLLKIQTF----------------KTKDTLQIYPHTE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E R++++VFIG+++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEDRVSEVVFIGKDINKEWFQEHFEECV 315
>gi|49481237|ref|YP_036181.1| cobalamin synthesis protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49332793|gb|AAT63439.1| cobalamin synthesis protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 316
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 162/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E+E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIEESEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + + + VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIQSTHCDVDIPSLLKIQTF----------------KTKDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDEVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E R++++VFIG+++++ ++ F+ C+
Sbjct: 271 QGVHTLFAASYDREWQEGEDRVSEVVFIGKDINKEWFQEHFEECV 315
>gi|423397254|ref|ZP_17374455.1| hypothetical protein ICU_02948 [Bacillus cereus BAG2X1-1]
gi|423408090|ref|ZP_17385239.1| hypothetical protein ICY_02775 [Bacillus cereus BAG2X1-3]
gi|401650148|gb|EJS67722.1| hypothetical protein ICU_02948 [Bacillus cereus BAG2X1-1]
gi|401658528|gb|EJS76024.1| hypothetical protein ICY_02775 [Bacillus cereus BAG2X1-3]
Length = 316
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 161/285 (56%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 58 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 117
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+++GV+T+VDS H +H + EA EQ+A+AD +++NK+DL+ E+E +L
Sbjct: 118 AYQINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADVVLVNKLDLIDESEKENLLH 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + VD+ +L + + T + H E
Sbjct: 172 ELQGINPTAKLIETTNCEVDIASLLQIQTF----------------KTKDTLQIYPHKE- 214
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HNH+ V S + E LDL ++++W+ +++E GE LYR KGILS+ G +++ VF
Sbjct: 215 --HNHL--EGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDKRIVF 270
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIG+++++ ++ F C+
Sbjct: 271 QGVHTLFAASYDREWQEGEERVSEVVFIGKDINKEWFQEHFGECV 315
>gi|330818648|ref|YP_004362353.1| Cobalamin synthesis protein/P47K family protein [Burkholderia
gladioli BSR3]
gi|327371041|gb|AEA62397.1| Cobalamin synthesis protein/P47K family protein [Burkholderia
gladioli BSR3]
Length = 361
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/309 (35%), Positives = 165/309 (53%), Gaps = 33/309 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA +K++G+ FD +VIETTGLA P PV +TF D ++
Sbjct: 60 MSNGCICCTIRGDLARALEDLAARKREGKLDFDRVVIETTGLANPGPVAQTFFIDSQIAD 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD +ITLVD+KHA L+E +E V+ QV +ADR+ + K DLV E L SL
Sbjct: 120 DFLLDAIITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKADLVDEAALASLK 172
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEVHVDNSHCATHHHESAHG 174
R+ H+N A ++ +G D+ + + G++L ID + V++ H H H
Sbjct: 173 HRLMHMNPKAAIRQVDFGQADIKEIFDLRGFNLNAKLEIDPDFLVEDEHEHDHAHHGHDH 232
Query: 175 HHE---GHHHNH----------------MHDSAVSSVTIVSEGTLDLDEVDDWLERLIEE 215
H H H HD + S ++ D +++D+L +++
Sbjct: 233 GDHAHCDHDHGHCEHDHEHGHGHHHHHAHHDDKIKSFVYRNDRPFDPTKLEDFLGGILQI 292
Query: 216 KGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETAL 275
GE L R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L + +
Sbjct: 293 YGERLLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAGKWMPIEKKTNKMVFIGIDLPQDLI 352
Query: 276 RKGFKGCLA 284
G CLA
Sbjct: 353 TDGLDACLA 361
>gi|399044987|ref|ZP_10738452.1| putative GTPase, G3E family [Rhizobium sp. CF122]
gi|398056386|gb|EJL48383.1| putative GTPase, G3E family [Rhizobium sp. CF122]
Length = 370
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 166/309 (53%), Gaps = 34/309 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++ G+FD I++ETTGLA P PV +TF D+ V +
Sbjct: 68 MNNGCVCCTVRGDLIRVVEGLMRRP-GRFDGIIVETTGLADPVPVAQTFFMDDDVRAKTE 126
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ LVD+KH L + + EA +Q+A+AD +++NK DLVT EL + + +
Sbjct: 127 LDAVVALVDAKHLPLRLKDSR------EAEDQIAFADVVLINKTDLVTPEELAQIEDIVH 180
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER-IDSEVH---------VDNSHCATHHHES 171
IN A V VD+ VL G ++LER ++++ H V C HH
Sbjct: 181 AINPSARVYKTSRSGVDLARVLDQGAFNLERALENDPHFLDHDHDDHVCGPDCDHDHHHH 240
Query: 172 AHGHHEGHHH----------------NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEE 215
H+ H + +HD V SV++ G ++ + W++++ +
Sbjct: 241 HAHDHDHDHDHHHHDHDHDHHHHGAMSPIHDVTVQSVSLRG-GEMNPERFFPWIQKVTQT 299
Query: 216 KGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETAL 275
+G ++ R+KGI++ ++YV QGVH ++G + W EK +LVFIGR LD L
Sbjct: 300 QGPNILRLKGIIAFKDDAERYVVQGVHMIVEGDHQRPWKDGEKHETRLVFIGRELDREKL 359
Query: 276 RKGFKGCLA 284
FK C A
Sbjct: 360 EASFKACEA 368
>gi|33354184|dbj|BAC81165.1| putative cobW protein [Oryza sativa Japonica Group]
gi|125600967|gb|EAZ40543.1| hypothetical protein OsJ_24998 [Oryza sativa Japonica Group]
gi|215734925|dbj|BAG95647.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 364
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 152/281 (54%), Gaps = 17/281 (6%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CCTV+ LV+ L QL ++K+ + DHI++ETTGLA PAP++ D+ + +KLD
Sbjct: 97 NGCVCCTVKHSLVQALEQLVQRKE-RMDHILLETTGLADPAPLVSILWLDDQLESSIKLD 155
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIKHI 123
+IT++D+K+ ++E EA Q+A+AD +ILNKIDLV E L L +I +
Sbjct: 156 SIITVIDAKNFRLQIDEHNKSSSFPEAFHQIAFADVVILNKIDLV-EGSLEDLERQIHEV 214
Query: 124 NAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHHNH 183
NA+ V + VD++ + Y + + + + + N
Sbjct: 215 NALVTVVQSVRCQVDLNKIFDQQAYGAKN-------------SSQLQELLEYSKSVPPNL 261
Query: 184 MHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--EDLYRMKGILSVSGSEQQYVFQGV 241
HD+++S++ I + + L +V+ WLE L+ E+ D+YR KGIL V S+Q + Q V
Sbjct: 262 RHDNSISTLCICEQDPISLSKVESWLEDLLWERKLDMDIYRCKGILHVHNSDQVHTLQAV 321
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
+ P + W E R NK+V IGRNLD L+ F C
Sbjct: 322 REVYEVLPAREWSKTESRTNKIVVIGRNLDINILQDSFSRC 362
>gi|297607571|ref|NP_001060185.2| Os07g0598900 [Oryza sativa Japonica Group]
gi|255677947|dbj|BAF22099.2| Os07g0598900, partial [Oryza sativa Japonica Group]
Length = 382
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 152/281 (54%), Gaps = 17/281 (6%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CCTV+ LV+ L QL ++K+ + DHI++ETTGLA PAP++ D+ + +KLD
Sbjct: 115 NGCVCCTVKHSLVQALEQLVQRKE-RMDHILLETTGLADPAPLVSILWLDDQLESSIKLD 173
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIKHI 123
+IT++D+K+ ++E EA Q+A+AD +ILNKIDLV E L L +I +
Sbjct: 174 SIITVIDAKNFRLQIDEHNKSSSFPEAFHQIAFADVVILNKIDLV-EGSLEDLERQIHEV 232
Query: 124 NAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHHNH 183
NA+ V + VD++ + Y + + + + + N
Sbjct: 233 NALVTVVQSVRCQVDLNKIFDQQAYGAKN-------------SSQLQELLEYSKSVPPNL 279
Query: 184 MHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--EDLYRMKGILSVSGSEQQYVFQGV 241
HD+++S++ I + + L +V+ WLE L+ E+ D+YR KGIL V S+Q + Q V
Sbjct: 280 RHDNSISTLCICEQDPISLSKVESWLEDLLWERKLDMDIYRCKGILHVHNSDQVHTLQAV 339
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
+ P + W E R NK+V IGRNLD L+ F C
Sbjct: 340 REVYEVLPAREWSKTESRTNKIVVIGRNLDINILQDSFSRC 380
>gi|393775113|ref|ZP_10363427.1| putative cobalamin synthase protein, CobW-like protein [Ralstonia
sp. PBA]
gi|392717690|gb|EIZ05250.1| putative cobalamin synthase protein, CobW-like protein [Ralstonia
sp. PBA]
Length = 359
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 169/310 (54%), Gaps = 40/310 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDLV L L ++ +FD +VIETTG+A P PV +TF D+ ++
Sbjct: 62 MSNGCICCTIRGDLVAALSDLMTRRDAGEIEFDRVVIETTGIANPGPVAQTFFMDDEIAT 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD++H Q L++ +EA + QV +AD I + K DLV+ ++ +L
Sbjct: 122 RYLLDAVITLVDARHGNQQLDQ-------HEAAQRQVGFADAIFITKSDLVSADDVAALR 174
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVD----------------- 160
R+ H+N AP++ +G +D + + G++L ++++ +D
Sbjct: 175 HRLVHMNPRAPIRTVNFGETPLDTIFDLRGFNL---NAKLELDPDFLKAEEHAHDHGHHH 231
Query: 161 ------NSHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIE 214
N+ C H + H H +H H+ ++S SE D +++++L ++
Sbjct: 232 DHDHTCNADCDHDHDHAHGHDH--GHAHHHHNDRIASFVFRSERPFDYAKLEEFLGGILT 289
Query: 215 EKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETA 274
GE L R KG+L + G +++ VFQGVH + G WG DE N++VFIG +L A
Sbjct: 290 VYGETLLRYKGVLYMQGVDRKVVFQGVHQLMGSDIGAPWG-DETPGNRMVFIGVDLPRDA 348
Query: 275 LRKGFKGCLA 284
+ KG +GCLA
Sbjct: 349 ILKGLEGCLA 358
>gi|399009478|ref|ZP_10711911.1| putative GTPase, G3E family [Pseudomonas sp. GM17]
gi|398112082|gb|EJM01951.1| putative GTPase, G3E family [Pseudomonas sp. GM17]
Length = 323
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 155/281 (55%), Gaps = 27/281 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDSGEITFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+KHA HL + A Q+ +ADR++++K DLV E +L+E
Sbjct: 121 RYILDGIITLVDAKHAEHHLTQTI-------AQAQIGFADRLLVSKRDLVDEPTFNALSE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L V G++L + + G
Sbjct: 174 RLTRINRRAPIRVVEHGRIDLAELLDVRGFNL-----------------NADLGGGVSLR 216
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
N +SS+ + ++ LD+D + +++ L+EE G+ L R KG+L+++G ++ VF
Sbjct: 217 PVSNAPSIDRISSLVLRTDAPLDIDRLSEFMNELLEEHGKQLLRYKGVLNIAGEPRRLVF 276
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W E R + +VFI +L E +R GF
Sbjct: 277 QGVLKLYGFDWDTEWAEGETRESVIVFIADDLPEEKIRAGF 317
>gi|378824058|ref|ZP_09846609.1| CobW/P47K family protein [Sutterella parvirubra YIT 11816]
gi|378597119|gb|EHY30456.1| CobW/P47K family protein [Sutterella parvirubra YIT 11816]
Length = 333
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 161/286 (56%), Gaps = 25/286 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL ++L L K+ +G+ FD++V+ET+G+A P PV +TF D+ V+
Sbjct: 68 MSNGCVCCTIRGDLSRVLTDLRHKRDRGEIDFDYVVLETSGVANPGPVAQTFFMDDAVAP 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+ +LDGV+T+VD+ + + L+ A +QV +ADRI+L+K DLV+ +
Sbjct: 128 FFRLDGVVTVVDALNGGETLDREA------NARDQVGFADRILLSKCDLVSPEAADEIEA 181
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ +NA AP++ G+ +D VL + G+++ I + VD S HH H
Sbjct: 182 RLRRMNARAPIRRVDMGACPVDEVLNITGFNMNDI---LDVDPSFFVDDHHHHHHN---- 234
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+ S + D ++D ++ L G DL R KG+L + G++++ VF
Sbjct: 235 --------DDIRSFVYETGRAFDPAKLDRYIMSLTNVYGPDLLRYKGVLFMKGTDRRVVF 286
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QGVH WG D K +++VFIGRNL E A+R+G CLA
Sbjct: 287 QGVHMLAVSDLMAPWG-DVKPSSRIVFIGRNLPEEAIRRGLSTCLA 331
>gi|134297263|ref|YP_001120998.1| cobalamin synthesis protein, P47K [Burkholderia vietnamiensis G4]
gi|387903601|ref|YP_006333940.1| metal chaperone [Burkholderia sp. KJ006]
gi|134140420|gb|ABO56163.1| cobalamin synthesis protein, P47K [Burkholderia vietnamiensis G4]
gi|387578493|gb|AFJ87209.1| Putative metal chaperone [Burkholderia sp. KJ006]
Length = 357
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 168/308 (54%), Gaps = 35/308 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA KK+ FD IVIETTGLA P PV +TF D ++
Sbjct: 60 MSNGCICCTIRGDLARALGDLAAKKRDGKLDFDRIVIETTGLANPGPVAQTFFIDSEIAD 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD +ITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + +L
Sbjct: 120 DFLLDAIITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKSDLVDDETVAALK 172
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHH-------- 169
R+ H+N A VK+ +G D+ + + G++L ++++ +D A H
Sbjct: 173 HRLLHMNPKATVKVVNFGEADIKEIFDLRGFNL---NAKLEIDPDFLAEDDHAHHHHDHD 229
Query: 170 -------------ESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK 216
E H H GHHH+ HD + S ++ D ++++D+L +++
Sbjct: 230 HDHDHAHCDHDHGECTHDHGHGHHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQIY 289
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L + +
Sbjct: 290 GERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPAEKKTNKMVFIGVDLPQDLIT 349
Query: 277 KGFKGCLA 284
G CLA
Sbjct: 350 DGLDACLA 357
>gi|378952955|ref|YP_005210443.1| cobalamin synthesis protein p47k family protein [Pseudomonas
fluorescens F113]
gi|359762969|gb|AEV65048.1| cobalamin synthesis protein p47k family protein [Pseudomonas
fluorescens F113]
Length = 323
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 156/285 (54%), Gaps = 27/285 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 62 LANGCVCCTIHTDLTKALYLLLERLDPGEIAFDRLVIECTGLADPAPVAQTFFIDEDLRE 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG++TLVD+ HA HL + A QV +ADR++L+K DLV ++ +L E
Sbjct: 122 RYILDGILTLVDAAHAEIHLTQAI-------AQAQVGFADRLLLSKTDLVDAAQIQALGE 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L + G++L N+ G
Sbjct: 175 RLTRINRRAPIRVVEHGKIDLAELLDIRGFNL----------NADLGAGFSLRPVGKATP 224
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + ++ LD+D++ +++ +L+EE G+ L R KG+L+++G ++ VF
Sbjct: 225 GDR-------ISSLVLRTDKALDIDKLSEFMNQLLEEHGKQLLRYKGVLNIAGEPRRLVF 277
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGV W P E R + +VFI L E +R GF+ L
Sbjct: 278 QGVLKLYGFDWDTEWAPGEARESVIVFIADELPEEKIRAGFEAAL 322
>gi|221201909|ref|ZP_03574946.1| CobW/P47K family protein [Burkholderia multivorans CGD2M]
gi|221178329|gb|EEE10739.1| CobW/P47K family protein [Burkholderia multivorans CGD2M]
Length = 359
Score = 169 bits (429), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 165/308 (53%), Gaps = 33/308 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA KK++G+ FD IVIETTGLA P PV +TF D ++
Sbjct: 60 MSNGCICCTIRGDLARALGDLAAKKREGKLDFDRIVIETTGLANPGPVAQTFFIDSEIAD 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + L
Sbjct: 120 DFLLDAVITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKSDLVDDETVAGLK 172
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEVHVDN------------- 161
R+ H+N A +KL +G D+ + + G++L ID + ++
Sbjct: 173 HRLMHMNPKATIKLVNFGDADIKEIFDLRGFNLNAKLEIDPDFLAEDDHAHHDHDHDHAH 232
Query: 162 -----SHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK 216
CA H H HHH H + S ++ D ++++D+L +++
Sbjct: 233 CDHDHGQCAHDHDHGHGHGHHNHHHAHHD-DKIKSFVYRNDRPFDPNKLEDFLGGILQIY 291
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L + +
Sbjct: 292 GERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPAEKKTNKMVFIGVDLPQDLIT 351
Query: 277 KGFKGCLA 284
G CLA
Sbjct: 352 DGLDACLA 359
>gi|421468805|ref|ZP_15917319.1| CobW/P47K family protein [Burkholderia multivorans ATCC BAA-247]
gi|400231142|gb|EJO60856.1| CobW/P47K family protein [Burkholderia multivorans ATCC BAA-247]
Length = 357
Score = 169 bits (429), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 166/308 (53%), Gaps = 35/308 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA KK++G+ FD IVIETTGLA P PV +TF D ++
Sbjct: 60 MSNGCICCTIRGDLARALGDLAAKKREGKLDFDRIVIETTGLANPGPVAQTFFIDSEIAD 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + L
Sbjct: 120 DFLLDAVITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKSDLVDDETVAGLK 172
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
R+ H+N A +KL +G D+ + + G++L ++++ +D A H H+
Sbjct: 173 HRLMHMNPKATIKLVNFGDADIKEIFDLRGFNL---NAKLEIDPDFLAEDDHAHHDHDHD 229
Query: 178 GHHHNHMHDSA---------------------VSSVTIVSEGTLDLDEVDDWLERLIEEK 216
H + HD + S ++ D ++++D+L +++
Sbjct: 230 HDHAHCDHDHGQCAHDHDHGHHNHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQIY 289
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L + +
Sbjct: 290 GERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPAEKKTNKMVFIGVDLPQDLIT 349
Query: 277 KGFKGCLA 284
G CLA
Sbjct: 350 DGLDACLA 357
>gi|424925011|ref|ZP_18348372.1| GTPase [Pseudomonas fluorescens R124]
gi|404306171|gb|EJZ60133.1| GTPase [Pseudomonas fluorescens R124]
Length = 323
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/279 (35%), Positives = 155/279 (55%), Gaps = 27/279 (9%)
Query: 4 NGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 NGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRERY 122
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
LDG+ITLVD+ HA QHL + A Q+ +ADR++++K DLV E +L+ER+
Sbjct: 123 LLDGIITLVDAAHADQHLAQTI-------AQAQIGFADRLLVSKTDLVDEAAFTALSERL 175
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN AP+++ ++GS+D+ +L V G++L + + G
Sbjct: 176 TRINRRAPIRVVEHGSIDLAELLDVRGFNL-----------------NADLGGGVSLRPV 218
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
+SS+ + ++ LD+D++ +++ L+EE G+ L R KG+L+++G +++ VFQG
Sbjct: 219 SKAPSIDRISSLVLRTDQPLDIDQLSEFMNELLEEHGKQLLRYKGVLNIAGEDRRLVFQG 278
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
V W E R + +VFI +L E +R GF
Sbjct: 279 VLKLYGFDWDTEWAEGEARESVIVFIADDLPEEKIRAGF 317
>gi|187919794|ref|YP_001888825.1| cobalamin synthesis protein P47K [Burkholderia phytofirmans PsJN]
gi|187718232|gb|ACD19455.1| cobalamin synthesis protein P47K [Burkholderia phytofirmans PsJN]
Length = 327
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 156/282 (55%), Gaps = 22/282 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVR DLV + +L + + + +++ET+GLA PAPV++TF D V + V+
Sbjct: 62 INNGCVCCTVRTDLVASVRELLTRYGDRLERLIVETSGLADPAPVLQTFLADPDVRERVE 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
L+ V+ +VD+ HA L + + A EQ+ +ADRI++NK D T + +L + I
Sbjct: 122 LEAVVAVVDACHAHAQLGD-------DIAREQIVFADRIVINKTDAATPAQRTALADTIA 174
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+N A ++ + ++D++ +LGV + L+ + S + D H HE
Sbjct: 175 TLNPTARLEFTSHSAIDVNALLGVRSFSLDNLLS-IEPDLLDDGAHDHE----------- 222
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD++++S V G +D + W +L++ G+ L RMKG+L++ G ++ F V
Sbjct: 223 ---HDNSIASCAFVVPGDVDAARFNRWANQLVQTHGQHLLRMKGVLNMRGEARRLYFHSV 279
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
H +D GKAW DE R ++ V IGR +D +R G C+
Sbjct: 280 HMLMDTRFGKAWARDETRESRFVVIGRGIDAAVMRDGLLACI 321
>gi|330811847|ref|YP_004356309.1| cobalamin synthesis protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379955|gb|AEA71305.1| Putative cobalamin synthesis protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 322
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 156/285 (54%), Gaps = 27/285 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LANGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEDLRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG++TLVD+ HA HL + A QV +ADR++L+K DLV ++ +L E
Sbjct: 121 RYILDGILTLVDAAHADVHLTQAI-------AQAQVGFADRLLLSKTDLVDAAQVQALGE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L + G++L N+ G
Sbjct: 174 RLTRINRRAPIRVVEHGKIDLAELLDIRGFNL----------NADLGAGFSLRPVGKATP 223
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + ++ LD+D++ +++ +L+EE G+ L R KG+L+++G ++ VF
Sbjct: 224 GDR-------ISSLVLRTDKALDIDKLSEFMNQLLEEHGKQLLRYKGVLNIAGEPRRLVF 276
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGV W P E R + +VFI L E +R GF+ L
Sbjct: 277 QGVLKLYGFDWDTEWAPGEARESVIVFIADELPEEKIRAGFEAAL 321
>gi|221207585|ref|ZP_03580593.1| CobW/P47K family protein [Burkholderia multivorans CGD2]
gi|221172431|gb|EEE04870.1| CobW/P47K family protein [Burkholderia multivorans CGD2]
Length = 375
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 165/308 (53%), Gaps = 33/308 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA KK++G+ FD IVIETTGLA P PV +TF D ++
Sbjct: 76 MSNGCICCTIRGDLARALGDLAAKKREGKLDFDRIVIETTGLANPGPVAQTFFIDSEIAD 135
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + L
Sbjct: 136 DFLLDAVITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKSDLVDDETVAGLK 188
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEVHVDN------------- 161
R+ H+N A +KL +G D+ + + G++L ID + ++
Sbjct: 189 HRLMHMNPKATIKLVNFGDADIKEIFDLRGFNLNAKLEIDPDFLAEDDHAHHDHDHDHAH 248
Query: 162 -----SHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK 216
CA H H HHH H + S ++ D ++++D+L +++
Sbjct: 249 CDHDHGQCAHDHDHGHGHGHHNHHHAHHD-DKIKSFVYRNDRPFDPNKLEDFLGGILQIY 307
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L + +
Sbjct: 308 GERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPAEKKTNKMVFIGVDLPQDLIT 367
Query: 277 KGFKGCLA 284
G CLA
Sbjct: 368 DGLDACLA 375
>gi|339487294|ref|YP_004701822.1| cobalamin synthesis protein P47K [Pseudomonas putida S16]
gi|338838137|gb|AEJ12942.1| cobalamin synthesis protein P47K [Pseudomonas putida S16]
Length = 317
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 158/282 (56%), Gaps = 24/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
++NGCLCC+VRGDL++ L L +K G FD ++IETTGLA PAP+ +TF D+ ++ +
Sbjct: 59 LSNGCLCCSVRGDLLRSLELLVQK--GGFDALIIETTGLANPAPIAQTFMLDDDLNDELI 116
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+ +VD H +Q + P E V Q+A+AD ++LNK +L++ ++ + + ++
Sbjct: 117 LDSVVCVVDGAH-IQGYWKRHP-----EIVHQLAFADTVVLNKAELLSGSKAQLVEDLLR 170
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
++ A + + +D+ + G Y L+ + + + H H
Sbjct: 171 RLSPRAELIRTSHCDLDVLALAGRAAYSLDDTRFDAALPQTPVLLHRH------------ 218
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
D V SV++ ++ + D +++ L + GEDL R KG+LS++ +++VFQGV
Sbjct: 219 ----DDEVVSVSLATDRDVVPDRFMKFIQTLQQAYGEDLLRYKGVLSLTNEPRRFVFQGV 274
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+ DG + W DE R +KLVFIGRNLD ALR F+ CL
Sbjct: 275 QAMADGDVQRRWADDEPRASKLVFIGRNLDAQALRTSFEACL 316
>gi|402565154|ref|YP_006614499.1| cobalamin synthesis protein P47K [Burkholderia cepacia GG4]
gi|402246351|gb|AFQ46805.1| cobalamin synthesis protein P47K [Burkholderia cepacia GG4]
Length = 357
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/308 (36%), Positives = 172/308 (55%), Gaps = 35/308 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L L AKK++G+ FD IVIETTGLA P PV +TF D ++
Sbjct: 60 MSNGCICCTIRGDLARALGDLAAKKREGKLDFDRIVIETTGLANPGPVAQTFFIDSEIAD 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + +L
Sbjct: 120 DFLLDAVITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKSDLVDDQAVAALK 172
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHH-------- 169
R+ H+N A +K+ +G D+ + + G++L ++++ +D A H
Sbjct: 173 HRLMHMNPKATIKVVNFGEADIKEIFDLRGFNL---NAKLEIDPDFLAEDDHAHQHHDHD 229
Query: 170 -------------ESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK 216
+ AH H GHHH+ HD + S ++ D ++++D+L +++
Sbjct: 230 HDHDHAHCDHDHGQCAHDHDHGHHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQIY 289
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L + +
Sbjct: 290 GERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPVEKKTNKMVFIGVDLPQDLIT 349
Query: 277 KGFKGCLA 284
G CLA
Sbjct: 350 DGLDACLA 357
>gi|423699417|ref|ZP_17673907.1| GTP-binding protein, YjiA family [Pseudomonas fluorescens Q8r1-96]
gi|387997268|gb|EIK58598.1| GTP-binding protein, YjiA family [Pseudomonas fluorescens Q8r1-96]
Length = 322
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 156/285 (54%), Gaps = 27/285 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LANGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEDLRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG++TLVD+ HA HL + A QV +ADR++L+K DLV ++ +L E
Sbjct: 121 RYILDGILTLVDAAHADVHLTQAI-------AQAQVGFADRLLLSKTDLVDAAQVQALGE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L + G++L N+ G
Sbjct: 174 RLTRINRRAPIRVVEHGKIDLAELLDIRGFNL----------NADLGAGFSLRPVGKATP 223
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + ++ LD+D++ +++ +L+EE G+ L R KG+L+++G ++ VF
Sbjct: 224 GDR-------ISSLLLRTDKALDIDKLSEFMNQLLEEHGKQLLRYKGVLNIAGEPRRLVF 276
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGV W P E R + +VFI L E +R GF+ L
Sbjct: 277 QGVLKLYGFDWDTEWAPGEARESVIVFIADELPEEKIRAGFEAAL 321
>gi|167585122|ref|ZP_02377510.1| cobalamin synthesis protein, P47K [Burkholderia ubonensis Bu]
Length = 355
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 163/306 (53%), Gaps = 33/306 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA KK+ FD IVIETTGLA P PV +TF D ++
Sbjct: 60 MSNGCICCTIRGDLARALGDLAAKKRDGKLDFDRIVIETTGLANPGPVAQTFFIDSEIAD 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD +ITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + L L
Sbjct: 120 DFLLDAIITLVDAKHADAQLDE-------HEVVQRQVGFADRLFITKSDLVDDETLAELK 172
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
R+ H+N A VK+ +G D+ + + G++L ++++ +D A H H+
Sbjct: 173 HRLVHMNPRAAVKVVNFGDADIKEIFDLRGFNL---NAKLEIDPDFLAEDEHAHHGHDHD 229
Query: 178 GHHHNHMHDSA-------------------VSSVTIVSEGTLDLDEVDDWLERLIEEKGE 218
H + HD + S ++ D ++++D+L +++ GE
Sbjct: 230 HDHAHCDHDHGHCDHDHAHGHRHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQIYGE 289
Query: 219 DLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKG 278
+ R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L + + G
Sbjct: 290 RMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPIEKKTNKMVFIGVDLPQDLITDG 349
Query: 279 FKGCLA 284
CLA
Sbjct: 350 LDACLA 355
>gi|161526253|ref|YP_001581265.1| cobalamin synthesis protein P47K [Burkholderia multivorans ATCC
17616]
gi|189349033|ref|YP_001944661.1| cobalamin biosynthesis protein [Burkholderia multivorans ATCC
17616]
gi|421476336|ref|ZP_15924226.1| CobW/P47K family protein [Burkholderia multivorans CF2]
gi|160343682|gb|ABX16768.1| cobalamin synthesis protein P47K [Burkholderia multivorans ATCC
17616]
gi|189333055|dbj|BAG42125.1| cobalamin biosynthesis protein [Burkholderia multivorans ATCC
17616]
gi|400228501|gb|EJO58431.1| CobW/P47K family protein [Burkholderia multivorans CF2]
Length = 359
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 166/310 (53%), Gaps = 37/310 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA KK++G+ FD IVIETTGLA P PV +TF D ++
Sbjct: 60 MSNGCICCTIRGDLARALGDLAAKKREGKLDFDRIVIETTGLANPGPVAQTFFIDSEIAD 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + L
Sbjct: 120 DFLLDAVITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKSDLVDDETVAGLK 172
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
R+ H+N A +KL +G D+ + + G++L ++++ +D A H H+
Sbjct: 173 HRLMHMNPKATIKLVNFGEADIKEIFDLRGFNL---NAKLEIDPDFLAEDDHAHHDHDHD 229
Query: 178 GHHHNHMHDSA-----------------------VSSVTIVSEGTLDLDEVDDWLERLIE 214
H + HD + S ++ D ++++D+L +++
Sbjct: 230 HDHAHCDHDHGQCAHDHDHGHGHHNHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQ 289
Query: 215 EKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETA 274
GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L +
Sbjct: 290 IYGERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPAEKKTNKMVFIGVDLPQDL 349
Query: 275 LRKGFKGCLA 284
+ G CLA
Sbjct: 350 ITDGLDACLA 359
>gi|221215810|ref|ZP_03588769.1| CobW/P47K family protein [Burkholderia multivorans CGD1]
gi|221164346|gb|EED96833.1| CobW/P47K family protein [Burkholderia multivorans CGD1]
Length = 359
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 166/310 (53%), Gaps = 37/310 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA KK++G+ FD IVIETTGLA P PV +TF D ++
Sbjct: 60 MSNGCICCTIRGDLARALGDLAAKKREGKLDFDRIVIETTGLANPGPVAQTFFIDSEIAD 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + L
Sbjct: 120 DFLLDAVITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKSDLVDDETVAGLK 172
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
R+ H+N A +KL +G D+ + + G++L ++++ +D A H H+
Sbjct: 173 HRLMHMNPKATIKLVNFGDADIKEIFDLRGFNL---NAKLEIDPDFLAEDDHAHHDHDHD 229
Query: 178 GHHHNHMHDSA-----------------------VSSVTIVSEGTLDLDEVDDWLERLIE 214
H + HD + S ++ D ++++D+L +++
Sbjct: 230 HDHAHCDHDHGQCAHDHDHGHGHHNHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQ 289
Query: 215 EKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETA 274
GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L +
Sbjct: 290 IYGERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPAEKKTNKMVFIGVDLPQDL 349
Query: 275 LRKGFKGCLA 284
+ G CLA
Sbjct: 350 ITDGLDACLA 359
>gi|398949004|ref|ZP_10673043.1| putative GTPase, G3E family [Pseudomonas sp. GM33]
gi|398159727|gb|EJM48015.1| putative GTPase, G3E family [Pseudomonas sp. GM33]
Length = 323
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 154/281 (54%), Gaps = 27/281 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + QG FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDQGDIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV E +L+E
Sbjct: 121 RYILDGIITLVDAAHADSHLTQTI-------AQAQIGFADRLLVSKRDLVDEPTFSALSE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ +G +D+ +L V G++L + + G
Sbjct: 174 RLTRINRRAPIRVVDHGKIDLAELLDVRGFNL-----------------NADLGGGVSLR 216
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + +E LD+D++ +++ L+EE G+ L R KG+L++ G ++ VF
Sbjct: 217 PVSQAPSIDRISSLVLRTEKPLDIDKLSEFMNELLEEHGKQLLRYKGVLNILGEPRRMVF 276
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W DE R + +VFI +L E +R+GF
Sbjct: 277 QGVLKLYGFDWDTEWAEDEVRESVIVFIADDLPEEKIREGF 317
>gi|91786961|ref|YP_547913.1| cobalamin synthesis protein, P47K [Polaromonas sp. JS666]
gi|91696186|gb|ABE43015.1| cobalamin synthesis protein, P47K [Polaromonas sp. JS666]
Length = 352
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 166/300 (55%), Gaps = 27/300 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQG--QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+NNGC+CC++R DL + L L AKK++G F+ +VIETTGLA P PV +TF DE +++
Sbjct: 61 MNNGCICCSIREDLRETLQLLAAKKRKGLLDFERVVIETTGLADPGPVAQTFFMDEEIAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD ++TLVD+KHA L++ + EA QV +AD+I ++K DLV E+ +L
Sbjct: 121 QYLLDSILTLVDAKHAQVQLDDRQ------EARRQVGFADQIFISKSDLVAADEVKALMH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHE-------- 170
R+ H+N AP K +G V + V + G++L ++++ +D H
Sbjct: 175 RLTHMNPRAPQKTVHFGEVAIADVFDLRGFNL---NAKLDIDPDFLTAEEHAAHDHHDHE 231
Query: 171 -------SAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRM 223
+H H H+H HD V S S+ +++D+L ++ G + R
Sbjct: 232 HGEHCDHPSHAHEGSQGHHHHHDDDVKSFVFRSDKAFSPAKLEDFLGAVVNIYGPRMLRY 291
Query: 224 KGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
KG+L++ G++++ +FQGVH + G AW EK+ +K+VFIG +L + +G + CL
Sbjct: 292 KGVLNMQGTDRKVIFQGVHQLMGSDLGPAWAEGEKKNSKMVFIGIDLPKDIFVQGLEQCL 351
>gi|398865191|ref|ZP_10620713.1| putative GTPase, G3E family [Pseudomonas sp. GM78]
gi|398243715|gb|EJN29294.1| putative GTPase, G3E family [Pseudomonas sp. GM78]
Length = 323
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 153/281 (54%), Gaps = 27/281 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L ++ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDSGDIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA QHL + A Q+ +ADR++++K DLV E +L+E
Sbjct: 121 RYILDGIITLVDAAHAEQHLTQTI-------AQAQIGFADRLLVSKRDLVDEPAFTALSE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ +G +D+ +L V G++L + + G
Sbjct: 174 RLTRINRRAPIRVVDHGKIDLAELLDVRGFNL-----------------NADLGGGVSLR 216
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + +E LD+D++ +++ L+EE G+ L R KG+L++ G ++ VF
Sbjct: 217 PVSQAPSIDRISSLVLRTEKPLDIDKLSEFMNELLEEHGKQLLRYKGVLNILGEPRRMVF 276
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W DE R + +VFI +L + +R+GF
Sbjct: 277 QGVLKLYGFDWDTEWADDETRESVIVFIADDLPQEKIRQGF 317
>gi|145353273|ref|XP_001420943.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581179|gb|ABO99236.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 339
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 158/293 (53%), Gaps = 36/293 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVI-ETFCTDELVS 57
+NNGC+CCTV+G LV+ + L +K++ +FD I++ETTGLA P PV E + DELV
Sbjct: 71 LNNGCVCCTVKGSLVQTIEGLLEKRKEMGEKFDFILLETTGLADPGPVARELWVDDELVE 130
Query: 58 Q-YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSL 116
+ LD ++TLVD+ + + + E K EA QVAYAD I+LNK DLV +L +
Sbjct: 131 EDGAVLDSIVTLVDASNIEKQIEENK------EATLQVAYADTILLNKADLVKAEDLERV 184
Query: 117 TERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHH 176
RI INA A + + SVD+ VL G V C + A
Sbjct: 185 KARIAAINAEAEIVVTTRSSVDLGIVLNQG-----------TVAGGGCGRKPYAPA---- 229
Query: 177 EGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK-----GEDLYRMKGILSVSG 231
+ +H+S + +V I + G LD + +WLE L+ E+ G D+ R KG++ +G
Sbjct: 230 -----SSVHNSDIRTVCIATSGFLDGESFQNWLEDLLWERRNAEGGADILRAKGLVYTAG 284
Query: 232 SEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
S+++ V Q V + G ++ +NKLVFIGRNLDE AL G K C+A
Sbjct: 285 SDKRRVLQAVREVYEITDGPVEENSDEVMNKLVFIGRNLDEDALAVGLKSCVA 337
>gi|282895834|ref|ZP_06303917.1| Cobalamin synthesis protein/P47K [Raphidiopsis brookii D9]
gi|281199222|gb|EFA74089.1| Cobalamin synthesis protein/P47K [Raphidiopsis brookii D9]
Length = 309
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 153/257 (59%), Gaps = 36/257 (14%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVR DL++++ L ++ + FD+++IETTGLA PAPVI++F DE++ +
Sbjct: 61 MNNGCICCTVRSDLIRIVSNLMERSK-DFDYLIIETTGLADPAPVIQSFLVDEVMQSRLL 119
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD+K+ +H + +EA EQ+A+AD I+LNK+DLV+ L L +RI+
Sbjct: 120 LDAIVTVVDAKYIWEHWDS-------SEAQEQIAFADVILLNKVDLVSPPILEELEQRIR 172
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER---IDSEVHVDNSHCATHHHESAHGHHEG 178
+N + + ++ + +D VLG+ +DL+ ID E +E+AH
Sbjct: 173 IMNGLTKIHRTQHCQISLDKVLGLSAFDLKNALTIDPE----------FLNEAAHD---- 218
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HD V+S++I G ++ ++ + WL RL++ +G DL+RMKGIL + + +
Sbjct: 219 ------HDETVTSISIQEAGVVNGEQFNRWLYRLVQARGPDLFRMKGILDMDNANRT--- 269
Query: 239 QGVHSTLDGCPGKAWGP 255
+ S P +A+GP
Sbjct: 270 --MQSRTCPPPLRAFGP 284
>gi|237746681|ref|ZP_04577161.1| GTPase [Oxalobacter formigenes HOxBLS]
gi|229378032|gb|EEO28123.1| GTPase [Oxalobacter formigenes HOxBLS]
Length = 343
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 161/293 (54%), Gaps = 22/293 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DLV L +LA K++ FD +VIETTGLA P PV +TF ++ V++
Sbjct: 62 MSNGCICCTIRSDLVTALTRLADKRRNGDINFDRVVIETTGLADPGPVAQTFFLEDAVAK 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+DG++TL+D+ AMQ L+E + +A +QV YADR++++K DLV+ E+ L
Sbjct: 122 DFMIDGIVTLMDAVFAMQQLDEYE------QARQQVGYADRLLISKTDLVSAEEVELLIA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAH----- 173
R++ IN A + +G V + VL + G++L S+V VD H
Sbjct: 176 RLRRINPHASIHTVDFGRVPVAEVLDLRGFNLS---SKVEVDMDDHTHRHDHDHPPHHDH 232
Query: 174 --GHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSG 231
G H H+ D ++S SE D D ++D+ +R+I G + R KG+L + G
Sbjct: 233 ECGPDCACSH-HLDD--INSFVFHSEKPFDPDRLNDFFDRMITLYGPQMLRYKGVLYMKG 289
Query: 232 SEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
++++ VFQGV + + W +KLVFIG+NL T +G LA
Sbjct: 290 ADRKVVFQGVQQLMGTDVVEKWEEKHAPESKLVFIGKNLPRTIFMEGLHASLA 342
>gi|307728180|ref|YP_003905404.1| cobalamin synthesis protein P47K [Burkholderia sp. CCGE1003]
gi|307582715|gb|ADN56113.1| cobalamin synthesis protein P47K [Burkholderia sp. CCGE1003]
Length = 365
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/316 (35%), Positives = 170/316 (53%), Gaps = 44/316 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL ++L LA +KQ FD +VIETTGLA P PV +TF D+ ++
Sbjct: 59 MSNGCICCTIRGDLSRVLGDLAAQKQSGKLDFDRVVIETTGLANPGPVAQTFFMDDQIAG 118
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD +ITLVD+KHA L+E +E V+ QV +ADR+ + K DLV E +L L
Sbjct: 119 EFLLDAIITLVDAKHANHQLDE-------HEVVQRQVGFADRLFITKSDLVDEQQLADLR 171
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCA------------ 165
R+ H+N A +K+ +G D+ + + G++L +S++ +D A
Sbjct: 172 HRLLHMNPKAAIKVVNFGDADIKEIFDLRGFNL---NSKLEIDPDFLAEDEHAHNHAHAH 228
Query: 166 ------------------THHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDD 207
H H GHH GHHH+ HD + S ++ D ++++D
Sbjct: 229 DEHGHTHDHDHDHANCDHDHGHCDHEGHHHGHHHHAHHDDKIKSFVYRNDRPFDPNKLED 288
Query: 208 WLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIG 267
+L +++ GE L R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG
Sbjct: 289 FLGGILQIYGEHLLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWQPAEKKTNKMVFIG 348
Query: 268 RNLDETALRKGFKGCL 283
+L + + G CL
Sbjct: 349 IDLPQDLITDGLDACL 364
>gi|421888191|ref|ZP_16319298.1| putative Cobalamin synthesis protein cobW homolog; putative GTPase
[Ralstonia solanacearum K60-1]
gi|378966446|emb|CCF96046.1| putative Cobalamin synthesis protein cobW homolog; putative GTPase
[Ralstonia solanacearum K60-1]
Length = 360
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 163/305 (53%), Gaps = 30/305 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKK---QGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL+ L L ++ + QFD +VIETTG+A P PV +TF D+ ++
Sbjct: 62 MSNGCICCTIRGDLLTALSDLVSRRDKGELQFDRVVIETTGVANPGPVAQTFFMDDEIAS 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD V+TLVD+KH Q L++ + EA QV +AD I + K DLV+ ++ +L
Sbjct: 122 RYLLDAVVTLVDAKHGNQQLDKQE------EAQRQVGFADAIFITKGDLVSAADVDALRH 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEVHVDNSHCATHHHESAHG- 174
R+ H+N AP++ A +G +D + + G++L ID + ++SH H H + G
Sbjct: 176 RLLHMNPRAPIRTASFGDTPIDTIFDLRGFNLNAKLEIDPDFLREDSHDHGHDHACSPGC 235
Query: 175 ----------------HHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGE 218
H HH + H ++S SE + +++++L ++ GE
Sbjct: 236 DHDHDHDHDHDHGHGHGHHRHHGHAHHTDRIASFVFRSERPFNYTKLEEFLSSVLNVYGE 295
Query: 219 DLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKG 278
L R KG+L + G +++ VFQGVH + W E N++VFIG +L + KG
Sbjct: 296 KLLRYKGVLYMEGVDRKVVFQGVHQLMGSDVSGKWD-SETPGNRMVFIGVDLPRDTILKG 354
Query: 279 FKGCL 283
+ CL
Sbjct: 355 LENCL 359
>gi|398964668|ref|ZP_10680445.1| putative GTPase, G3E family [Pseudomonas sp. GM30]
gi|398148054|gb|EJM36742.1| putative GTPase, G3E family [Pseudomonas sp. GM30]
Length = 323
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 155/284 (54%), Gaps = 27/284 (9%)
Query: 4 NGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 NGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRERY 122
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV ET +L+ER+
Sbjct: 123 LLDGIITLVDAAHAELHLTQTI-------AQAQIGFADRLLVSKTDLVDETTFNALSERL 175
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN AP+++ ++G++D+ +L V G++L + + G
Sbjct: 176 TRINRRAPIRVVEHGNIDLAELLDVRGFNL-----------------NADLGGGVSLRPV 218
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
+SS+ + ++ LD+D++ +++ L+EE G+ L R KG+L+++G ++ VFQG
Sbjct: 219 SKAPSIDRISSLVLRTDQPLDIDQLSEFMNELLEEHGKQLLRYKGVLNIAGENRRLVFQG 278
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
V W E R + +VFI +L E +R GF A
Sbjct: 279 VLKLYGFDWDTEWAEGEARESVIVFIADDLPEEKIRAGFAKVAA 322
>gi|389681736|ref|ZP_10173080.1| GTP-binding protein, YjiA family [Pseudomonas chlororaphis O6]
gi|388554271|gb|EIM17520.1| GTP-binding protein, YjiA family [Pseudomonas chlororaphis O6]
Length = 323
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 152/281 (54%), Gaps = 27/281 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L ++ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALFLLLERVDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+KHA HL + A Q+ +ADR++++K DLV E +L+E
Sbjct: 121 RYILDGIITLVDAKHAEHHLTQTI-------AQAQIGFADRLLVSKRDLVDEQTFNALSE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L V G++L + + G
Sbjct: 174 RLTRINRRAPIRVVEHGRIDLAELLDVRGFNL-----------------NADLGGGVSLR 216
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + ++ LD+D + +++ L+EE G+ L R KG+L+++G ++ VF
Sbjct: 217 PVSKAPSIDRISSLVLRTDAPLDIDRLSEFMNELLEEHGKQLLRYKGVLNIAGEPRRLVF 276
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W E R + +VFI +L E +R GF
Sbjct: 277 QGVLKLYGFDWDTEWAEGETRESVIVFIADDLPEEKIRAGF 317
>gi|124268570|ref|YP_001022574.1| hypothetical protein Mpe_A3386 [Methylibium petroleiphilum PM1]
gi|124261345|gb|ABM96339.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 347
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 163/293 (55%), Gaps = 16/293 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DL L L AKK++G+ FD IVIETTGLA P PV +TF D+ +++
Sbjct: 61 MSNGCICCTIREDLRATLTDLAAKKRKGELDFDRIVIETTGLADPGPVAQTFFMDDEIAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD ++TLVD+KHA Q L++ + EA QV +AD+I L+K DLV + +L
Sbjct: 121 SYLLDSILTLVDAKHAGQQLDDRQ------EARRQVGFADQIFLSKTDLVAKDATDALIH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE-RIDSEVHVDNSHCATHHHESAHGHHE 177
R+KH+N AP++ +G V + V + G++L ++D + + HHH
Sbjct: 175 RLKHMNPRAPLQAVHFGEVPLKDVFDLRGFNLNAKLDIDPDFLKADDHEHHHHDHEHGEH 234
Query: 178 GHHHN------HMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSG 231
H + H HD V S S + +++++L ++ G + R KG+L V G
Sbjct: 235 CDHPSHAHGHHHAHDDDVKSFVFRSNRPFNPAKLEEFLGTMVNVYGPRMLRYKGVLRVQG 294
Query: 232 SEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+++ +FQGVH + G W E R +K+VFIG +L + +G + CLA
Sbjct: 295 FDKKVIFQGVHQLMGSDVGPLWAAGETRGSKMVFIGIDLPKDVFLQGLEQCLA 347
>gi|254251132|ref|ZP_04944450.1| Cobalamin synthesis protein/P47K [Burkholderia dolosa AUO158]
gi|124893741|gb|EAY67621.1| Cobalamin synthesis protein/P47K [Burkholderia dolosa AUO158]
Length = 395
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 166/309 (53%), Gaps = 36/309 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA +K++G+ FD IVIETTGLA P PV +TF D ++
Sbjct: 97 MSNGCICCTIRGDLARALGDLAAQKREGKLDFDRIVIETTGLANPGPVAQTFFIDSEIAD 156
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + L
Sbjct: 157 DFLLDAVITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKSDLVDDQTVAGLK 209
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
R+ H+N A +KL +G D+ + + G++L ++++ +D A H H H+
Sbjct: 210 HRLMHMNPKATIKLVNFGEADIKEIFDLRGFNL---NAKLEIDPDFLAEDDHAHHHHDHD 266
Query: 178 GHHHNHMHDSA----------------------VSSVTIVSEGTLDLDEVDDWLERLIEE 215
H + D + S ++ D ++++D+L +++
Sbjct: 267 HDHDHANCDHDHGECAHDHGHGHHHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQI 326
Query: 216 KGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETAL 275
GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L + +
Sbjct: 327 YGERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPAEKKTNKMVFIGVDLPQDLI 386
Query: 276 RKGFKGCLA 284
G CLA
Sbjct: 387 TDGLDACLA 395
>gi|451813256|ref|YP_007449709.1| GTPase of G3E family [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
gi|451779225|gb|AGF50105.1| GTPase of G3E family [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
Length = 362
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 155/293 (52%), Gaps = 38/293 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQ---FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CC++RGDLVK L L KK + FDH++IETTG+A P P+ +TF D ++
Sbjct: 89 LSNGCICCSIRGDLVKTLNDLKTKKLNKSLNFDHVIIETTGIANPGPICQTFFIDNDIAN 148
Query: 59 YVKLDGVITLVDSKHAMQHL-NEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLT 117
Y +LD V+ LVD+KH + L N++ EA +Q+ +ADRI+++K DLV + E L
Sbjct: 149 YYRLDSVVALVDAKHGIDTLKNQI-------EAQKQIGFADRILVSKSDLVDDKEFNLLK 201
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDL--------ERIDSEVHVDNSHCATHHH 169
+ + IN +P+K YG ++++ +L + G++L E I+ E H+ + C
Sbjct: 202 KHLIKINPRSPIKKTNYGDINIEDILNINGFNLNDALDINSEFINQEEHICSEDC----- 256
Query: 170 ESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSV 229
HH+N +SS +S +++ L L E+ G ++ R KGIL +
Sbjct: 257 ---------HHNNE-----ISSFVFLSNKPFCSKKLEIVLSYLTEKYGPNMLRYKGILYM 302
Query: 230 SGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
+ ++ + QGVH + G W +K K+VFIG L + C
Sbjct: 303 HDTNKRIILQGVHMLMGAEQGNEWESAQKPNTKIVFIGHKLPRELFVEKLNEC 355
>gi|332524718|ref|ZP_08400916.1| cobalamin synthesis protein P47K [Rubrivivax benzoatilyticus JA2]
gi|332108025|gb|EGJ09249.1| cobalamin synthesis protein P47K [Rubrivivax benzoatilyticus JA2]
Length = 346
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 159/289 (55%), Gaps = 13/289 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DL L LA++++ FD +VIETTGLA P PV +TF D+ +++
Sbjct: 63 MSNGCVCCTIREDLRSTLSDLAERRRKGLIAFDRVVIETTGLADPGPVAQTFFMDDEIAE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD V+TLVD+ HA + LN EA QV +ADR+ ++K DL L +L
Sbjct: 123 SYLLDSVVTLVDAVHADEQLN------TRQEARRQVGFADRLFISKADLAPAAALDALQY 176
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLER---IDSE-VHVDNSHCATHHHESAHG 174
R++ +N AP + +G V + V + G++L ID + + HHH G
Sbjct: 177 RLRQMNPRAPQRSVHFGEVAIAEVFDLKGFNLSAKLDIDPDFLADQAHAHDHHHHHHHDG 236
Query: 175 HHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQ 234
H +H HD V S ++ +++D+L +++ G + R KG+L + GSE+
Sbjct: 237 EACDHPSHHAHDDDVKSFVFRAKRPFSPAKLEDFLGSVVQVYGPKMLRYKGVLYMKGSER 296
Query: 235 QYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+ VFQGVH + G W P E++++KLVFIG +L L +G + CL
Sbjct: 297 KVVFQGVHQLMGSDLGPKWAPGEEKLSKLVFIGIDLPRDILEQGLEQCL 345
>gi|398850157|ref|ZP_10606865.1| putative GTPase, G3E family [Pseudomonas sp. GM80]
gi|398249519|gb|EJN34905.1| putative GTPase, G3E family [Pseudomonas sp. GM80]
Length = 323
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 153/279 (54%), Gaps = 27/279 (9%)
Query: 4 NGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 NGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRERY 122
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
LDG+ITLVD+ HA HL++ A Q+ +ADR++++K DLV E +L+ER+
Sbjct: 123 LLDGIITLVDAAHAAVHLSQTI-------AQAQIGFADRLLVSKTDLVDEATFTALSERL 175
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN AP+++ +G++D+ +L V G++L + + G
Sbjct: 176 TRINRRAPIRVVDHGNIDLAELLDVRGFNL-----------------NADLGGGLSLRPV 218
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
+SS+ + ++ LD+D++ +++ L+EE G+ L R KG+LS++G +++ VFQG
Sbjct: 219 SKAPSIDRISSLVLRTDQPLDIDQLSEFMNELLEEHGKQLLRYKGVLSIAGEDRRLVFQG 278
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
V W E R + +VFI L E +R GF
Sbjct: 279 VLKLYGFDWDTEWAEGEARESVIVFIADELPEEKIRAGF 317
>gi|171320568|ref|ZP_02909592.1| cobalamin synthesis protein P47K [Burkholderia ambifaria MEX-5]
gi|171094195|gb|EDT39278.1| cobalamin synthesis protein P47K [Burkholderia ambifaria MEX-5]
Length = 391
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 166/310 (53%), Gaps = 37/310 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA KK++G+ FD IVIETTGLA P PV +TF D ++
Sbjct: 92 MSNGCICCTIRGDLARALGDLAAKKREGKLDFDRIVIETTGLANPGPVAQTFFIDSEIAD 151
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + L
Sbjct: 152 DFLLDAVITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKSDLVDDQAVAGLK 204
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
R+ H+N A +K+ +G D+ + + G++L ++++ +D A H H H+
Sbjct: 205 HRLMHMNPKATIKIVNFGEADIKEIFDLRGFNL---NAKLEIDPDFLAEDDHAHDHHAHD 261
Query: 178 GHHHNHMHDSA-----------------------VSSVTIVSEGTLDLDEVDDWLERLIE 214
H + D + S ++ D ++++D+L +++
Sbjct: 262 HDHDHADCDHDHGQCAHDHDHGHHHHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQ 321
Query: 215 EKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETA 274
GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L +
Sbjct: 322 IYGERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPVEKKTNKMVFIGVDLPQDL 381
Query: 275 LRKGFKGCLA 284
+ G CLA
Sbjct: 382 ITDGLDACLA 391
>gi|172062038|ref|YP_001809690.1| cobalamin synthesis protein P47K [Burkholderia ambifaria MC40-6]
gi|171994555|gb|ACB65474.1| cobalamin synthesis protein P47K [Burkholderia ambifaria MC40-6]
Length = 387
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 166/309 (53%), Gaps = 36/309 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA KK++G+ FD IVIETTGLA P PV +TF D ++
Sbjct: 89 MSNGCICCTIRGDLARALGDLAAKKREGKLDFDRIVIETTGLANPGPVAQTFFIDSEIAD 148
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + L
Sbjct: 149 DFLLDAVITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKSDLVDDQTVAGLK 201
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
R+ H+N A +K+ +G D+ + + G++L ++++ +D A H AH H
Sbjct: 202 HRLMHMNPKATIKIVNFGEADIKEIFDLRGFNL---NAKLEIDPDFLAEDDHAHAHHDHG 258
Query: 178 GHHHNHMHDSA----------------------VSSVTIVSEGTLDLDEVDDWLERLIEE 215
H + D + S ++ D ++++D+L +++
Sbjct: 259 HDHDHADCDHDHGQCAHDHDHGHHHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQI 318
Query: 216 KGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETAL 275
GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L + +
Sbjct: 319 YGERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPVEKKTNKMVFIGVDLPQDLI 378
Query: 276 RKGFKGCLA 284
G CLA
Sbjct: 379 TDGLDACLA 387
>gi|339488264|ref|YP_004702792.1| putative CobW protein involved in cobalamin synthesis [Pseudomonas
putida S16]
gi|338839107|gb|AEJ13912.1| putative CobW protein involved in cobalamin synthesis [Pseudomonas
putida S16]
Length = 360
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 154/291 (52%), Gaps = 15/291 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG------QFDHIVIETTGLAKPAPVIETFCTDEL 55
++NGC+CC+ + DL++ L +L +K G FD IVIETTGLA PAP+ + F TD
Sbjct: 64 LSNGCICCSSKDDLIESLYKLYMRKSGLIEPKIDFDRIVIETTGLANPAPLAQAFYTDMS 123
Query: 56 VSQYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGS 115
+S +LD ++TLVD+KH L + +EA Q+A AD+++LNK DLVTE E
Sbjct: 124 LSLTYRLDAIVTLVDAKHVGLQLKD------CSEAERQIALADKVVLNKRDLVTEVEFDQ 177
Query: 116 LTERIKHINAMAPVKLAKYGSVDMDFVLGVGGYD--LERIDSEVHVDNSHCATHHHESAH 173
+ +N AP + + +D+D +L +D + D + A H H+
Sbjct: 178 ALAAVSRLNPFAPKEFTSFSEIDVDALLRSSFFDPAAQNADLSEWLGEVKQAPHEHDGPC 237
Query: 174 GHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSE 233
G H+H H + VS++++ +D E+ + L L + G +LYR+KG++S SG
Sbjct: 238 GADCHARHSH-HHTDVSAISLRDSREVDYQELMNCLLSLTTDYGANLYRIKGLVSFSGVG 296
Query: 234 QQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+ V QGV + P +LV IG++LD +R+ F+ C+A
Sbjct: 297 RPVVLQGVQNVFSPLSYADSWPGGIAETRLVIIGKHLDHQKIRQSFEACIA 347
>gi|377822157|ref|YP_004978528.1| cobalamin synthesis protein, P47K [Burkholderia sp. YI23]
gi|357936992|gb|AET90551.1| cobalamin synthesis protein, P47K [Burkholderia sp. YI23]
Length = 357
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 163/307 (53%), Gaps = 35/307 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA + + QFD +VIETTGLA P PV +TF D V+
Sbjct: 59 MSNGCICCTIRGDLARALEDLANRNKAGTLQFDRVVIETTGLANPGPVAQTFFMDNTVAD 118
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD +ITLVD+KHA L++ +E V+ QV +ADR+ + K DLV+ EL +L
Sbjct: 119 EFLLDAIITLVDAKHADSQLDQ-------HEVVQRQVGFADRLFVTKSDLVSADELDALK 171
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCA------------ 165
R+ H+N A +K+ +G D+ + + G++L +S++ +D A
Sbjct: 172 HRLLHMNPRAAIKVVNFGDADIKEIFDLRGFNL---NSKLEIDPDFLAEDDHDHAHGHDH 228
Query: 166 -THHHESAHGHHEGHHHNHMHDSA--------VSSVTIVSEGTLDLDEVDDWLERLIEEK 216
H S GH H H H H + S S+ D + ++D+L +++
Sbjct: 229 EHDHDHSTCGHDHSHDHEHGHHHHHHAHHDDKIKSFVYRSDKPFDPNRLEDFLGGILQIY 288
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
GE L R KG+L + G +++ VFQGVH + W P EK+ +K+VFIG L + +
Sbjct: 289 GERLLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAGKWMPIEKKNSKMVFIGIELPKDLIT 348
Query: 277 KGFKGCL 283
G CL
Sbjct: 349 DGLDACL 355
>gi|437999633|ref|YP_007183366.1| CobW/HypB/UreG, nucleotide-binding protein domain-containing
protein 5 [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|429338867|gb|AFZ83289.1| CobW/HypB/UreG, nucleotide-binding protein domain-containing
protein 5 [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
Length = 341
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 155/293 (52%), Gaps = 38/293 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQ---FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CC++RGDLVK L L KK + FDH++IETTG+A P P+ +TF D ++
Sbjct: 68 LSNGCICCSIRGDLVKTLNDLKTKKLNKSLNFDHVIIETTGIANPGPICQTFFIDNDIAN 127
Query: 59 YVKLDGVITLVDSKHAMQHL-NEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLT 117
Y +LD V+ LVD+KH + L N++ EA +Q+ +ADRI+++K DLV + E L
Sbjct: 128 YYRLDSVVALVDAKHGIDTLKNQI-------EAQKQIGFADRILVSKSDLVDDKEFNLLK 180
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDL--------ERIDSEVHVDNSHCATHHH 169
+ + IN +P+K YG ++++ +L + G++L E I+ E H+ + C
Sbjct: 181 KHLIKINPRSPIKKTNYGDINIEDILNINGFNLNDALDINSEFINQEEHICSEDC----- 235
Query: 170 ESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSV 229
HH+N +SS +S +++ L L E+ G ++ R KGIL +
Sbjct: 236 ---------HHNNE-----ISSFVFLSNKPFCSKKLEIVLSYLTEKYGPNMLRYKGILYM 281
Query: 230 SGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
+ ++ + QGVH + G W +K K+VFIG L + C
Sbjct: 282 HDTNKRIILQGVHMLMGAEQGNEWESAQKPNTKIVFIGHKLPRELFVEKLNEC 334
>gi|170703228|ref|ZP_02894031.1| cobalamin synthesis protein P47K [Burkholderia ambifaria IOP40-10]
gi|170131861|gb|EDT00386.1| cobalamin synthesis protein P47K [Burkholderia ambifaria IOP40-10]
Length = 388
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/310 (34%), Positives = 167/310 (53%), Gaps = 37/310 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA KK++G+ FD IVIETTGLA P PV +TF D ++
Sbjct: 89 MSNGCICCTIRGDLARALGDLAAKKREGKLDFDRIVIETTGLANPGPVAQTFFIDSEIAD 148
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + L
Sbjct: 149 DFLLDAVITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKSDLVDDQTVAGLK 201
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCA------------ 165
R+ H+N A +K+ +G D+ + + G++L ++++ +D A
Sbjct: 202 HRLMHMNPKATIKIVNFGEADIKEIFDLRGFNL---NAKLEIDPDFLAEDDHAHDHHDHG 258
Query: 166 -----------THHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIE 214
H H HHH+ HD + S ++ D ++++D+L +++
Sbjct: 259 HDHDHADCDHDHGQCAHDHDHDHHHHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQ 318
Query: 215 EKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETA 274
GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L +
Sbjct: 319 IYGERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPVEKKTNKMVFIGVDLPQDL 378
Query: 275 LRKGFKGCLA 284
+ G CLA
Sbjct: 379 ITDGLDACLA 388
>gi|228991052|ref|ZP_04151013.1| Cobalamin synthesis protein [Bacillus pseudomycoides DSM 12442]
gi|228768676|gb|EEM17278.1| Cobalamin synthesis protein [Bacillus pseudomycoides DSM 12442]
Length = 344
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 158/285 (55%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 86 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 145
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
K++GV+T+VDS H +H + EA EQ+A+AD +++NK+DLV E E L
Sbjct: 146 AYKINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADMVLVNKLDLVGEEEEKELLT 199
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + VD+ +L + + R E++
Sbjct: 200 ELQGINPTAKLIPTTNCEVDIPVLLEIQTFK-TRDTLEIY-------------------- 238
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H H H V S + E LDL ++++W+ +++E GE LYR KGILS+ G + + VF
Sbjct: 239 PHKEHHHLEGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDCRIVF 298
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIG+++++ ++ FK C+
Sbjct: 299 QGVHTLFAASYDREWQEGEERVSEVVFIGKDINKEWFQEHFKECV 343
>gi|398873383|ref|ZP_10628641.1| putative GTPase, G3E family [Pseudomonas sp. GM74]
gi|398199596|gb|EJM86532.1| putative GTPase, G3E family [Pseudomonas sp. GM74]
Length = 323
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 156/281 (55%), Gaps = 27/281 (9%)
Query: 2 VNNGCLCCTVRGDLVK---MLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K +LL+ + FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDRGDIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A QV +ADR++++K DLV E +L+E
Sbjct: 121 RYILDGIITLVDAAHADLHLAQTI-------AQAQVGFADRLLVSKRDLVDEATFTALSE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ +G +D+ +L V G++L + D T S +
Sbjct: 174 RLTRINRRAPIRVVDHGKIDLAELLDVRGFNL-------NADLGGGVTLRPVSQVPSID- 225
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + +E LD+D++ +++ L+EE G+ L R KG+L++ G ++ VF
Sbjct: 226 ---------RISSLVLRTEKPLDIDKLSEFMNELLEEHGKQLLRYKGVLNILGESRRMVF 276
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV WG D+ R + +VFI +L E +R+GF
Sbjct: 277 QGVLKLYGFDWDTEWGEDDVRESVIVFIADDLPEEKIREGF 317
>gi|421865659|ref|ZP_16297335.1| putative metal chaperone [Burkholderia cenocepacia H111]
gi|444358249|ref|ZP_21159690.1| CobW/P47K family protein [Burkholderia cenocepacia BC7]
gi|444372778|ref|ZP_21172205.1| CobW/P47K family protein [Burkholderia cenocepacia K56-2Valvano]
gi|358074543|emb|CCE48213.1| putative metal chaperone [Burkholderia cenocepacia H111]
gi|443592851|gb|ELT61627.1| CobW/P47K family protein [Burkholderia cenocepacia K56-2Valvano]
gi|443604468|gb|ELT72399.1| CobW/P47K family protein [Burkholderia cenocepacia BC7]
Length = 385
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 166/310 (53%), Gaps = 37/310 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA KK++G+ FD IVIETTGLA P PV +TF D ++
Sbjct: 86 MSNGCICCTIRGDLARALGDLAAKKREGKLDFDRIVIETTGLANPGPVAQTFFIDSEIAD 145
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + L
Sbjct: 146 DFLLDAVITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKSDLVDDQTVAGLK 198
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
R+ H+N A +K+ +G D+ + + G++L ++++ +D A H H H+
Sbjct: 199 HRLMHMNPKAAIKVVNFGEADIKEIFDLRGFNL---NAKLEIDPDFLAEDDHAHHHHDHD 255
Query: 178 GHHHNHMHDSA-----------------------VSSVTIVSEGTLDLDEVDDWLERLIE 214
H + D + S ++ D ++++D+L +++
Sbjct: 256 HDHDHANCDHDHGQCAHDHDHGHHNHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQ 315
Query: 215 EKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETA 274
GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L +
Sbjct: 316 IYGERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPVEKKTNKMVFIGVDLPQDL 375
Query: 275 LRKGFKGCLA 284
+ G CLA
Sbjct: 376 ITDGLDACLA 385
>gi|206558904|ref|YP_002229664.1| putative cobalamin synthesis protein [Burkholderia cenocepacia
J2315]
gi|198034941|emb|CAR50813.1| putative cobalamin synthesis protein [Burkholderia cenocepacia
J2315]
Length = 359
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 166/310 (53%), Gaps = 37/310 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA KK++G+ FD IVIETTGLA P PV +TF D ++
Sbjct: 60 MSNGCICCTIRGDLARALGDLAAKKREGKLDFDRIVIETTGLANPGPVAQTFFIDSEIAD 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + L
Sbjct: 120 DFLLDAVITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKSDLVDDQTVAGLK 172
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
R+ H+N A +K+ +G D+ + + G++L ++++ +D A H H H+
Sbjct: 173 HRLMHMNPKAAIKVVNFGEADIKEIFDLRGFNL---NAKLEIDPDFLAEDDHAHHHHDHD 229
Query: 178 GHHHNHMHDSA-----------------------VSSVTIVSEGTLDLDEVDDWLERLIE 214
H + D + S ++ D ++++D+L +++
Sbjct: 230 HDHDHANCDHDHGQCAHDHDHGHHNHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQ 289
Query: 215 EKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETA 274
GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L +
Sbjct: 290 IYGERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPVEKKTNKMVFIGVDLPQDL 349
Query: 275 LRKGFKGCLA 284
+ G CLA
Sbjct: 350 ITDGLDACLA 359
>gi|413964048|ref|ZP_11403275.1| cobalamin synthesis protein, P47K [Burkholderia sp. SJ98]
gi|413929880|gb|EKS69168.1| cobalamin synthesis protein, P47K [Burkholderia sp. SJ98]
Length = 357
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 163/307 (53%), Gaps = 35/307 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA +K+ FD +VIETTGLA P PV +TF D V+
Sbjct: 59 MSNGCICCTIRGDLARALEDLANRKKAGTLDFDRVVIETTGLANPGPVAQTFFMDNTVAD 118
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD +ITLVD+KHA L++ +E V+ QV +ADR+ + K DLV+ EL +L
Sbjct: 119 EFLLDAIITLVDAKHANAQLDQ-------HEVVQRQVGFADRLFITKSDLVSADELEALK 171
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCA------------ 165
R+ H+N A +K+ +G D+ + + G++L +S++ +D A
Sbjct: 172 HRLLHMNPRAAIKVVNFGDADIKEIFDLRGFNL---NSKLEIDPDFLAEDDHDHDHAHDH 228
Query: 166 -THHHESAHGHHEGHHHNHMHDSA--------VSSVTIVSEGTLDLDEVDDWLERLIEEK 216
H S GH H H H H + S S+ D + ++D+L +++
Sbjct: 229 DHDHDHSTCGHDHSHDHEHGHHHHHHAHHDDKIKSFVYRSDKPFDPNRLEDFLGGILQIY 288
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
GE L R KG+L + G +++ VFQGVH + W P EK+ +K+VFIG L + +
Sbjct: 289 GERLLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAGKWMPIEKKNSKMVFIGIELPKDLIT 348
Query: 277 KGFKGCL 283
G CL
Sbjct: 349 DGLDACL 355
>gi|425901691|ref|ZP_18878282.1| GTP-binding protein, YjiA family [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397892985|gb|EJL09461.1| GTP-binding protein, YjiA family [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 323
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 154/281 (54%), Gaps = 27/281 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+KHA HL + A Q+ +ADR++++K DLV E +L+E
Sbjct: 121 RYILDGIITLVDAKHAEHHLTQTI-------AQAQIGFADRLLVSKRDLVDEQTFNALSE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L V G++L + + G
Sbjct: 174 RLTRINRRAPIRVVEHGRIDLAELLDVRGFNL-----------------NADLGGGVSLR 216
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + ++ LD+D + +++ L+EE G+ L R KG+L+++G ++ VF
Sbjct: 217 PVSKVPSIDRISSLVLRTDAPLDIDRLSEFMNELLEEHGKQLLRYKGVLNIAGEPRRLVF 276
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W E R + +VFI +L E +R GF
Sbjct: 277 QGVLKLYGFDWDTEWAEGETRESVIVFIADDLPEEKIRAGF 317
>gi|328773154|gb|EGF83191.1| hypothetical protein BATDEDRAFT_21669 [Batrachochytrium
dendrobatidis JAM81]
Length = 365
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 159/293 (54%), Gaps = 32/293 (10%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGCLCC+++ VK + L K+K GQFD++++ETTGLA P P+ F DE + + LD
Sbjct: 91 NGCLCCSLKDAGVKAIENLVKRK-GQFDYVLLETTGLADPGPIASLFWLDEELQSDLYLD 149
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAV--EQVAYADRIILNKIDLVTETELGSLTERIK 121
G++T+VD+KH Q+L +NEAV +Q+A ADR+++NK DLV + ++ E++K
Sbjct: 150 GILTIVDAKHIEQYLTTQNKHNSINEAVRLKQIALADRLVINKCDLVDTDTVNTVVEKVK 209
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN+ AP+ + V ++F+L + + E++D++ D H T H
Sbjct: 210 SINSSAPILKTERSKVPVEFILDLHCF--EQVDNDPFTDRVHQQTAHK------------ 255
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG----------EDLYRMKGILSVSG 231
D VS+V G + ++D W++ L+ E+ L R+KG++ V G
Sbjct: 256 ---IDEYVSTVIFTCTGVVTKTKLDLWIQALLWEQTLLNINASLPQPKLLRLKGVVDVIG 312
Query: 232 SEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF-KGCL 283
++ + QGV D G AW P+ R+NK V IG LD+ L + F K CL
Sbjct: 313 QDRMCIVQGVQEMYDLHEGGAW-PNGPRVNKFVLIGMELDKELLIQSFTKSCL 364
>gi|121595975|ref|YP_987871.1| cobalamin synthesis protein, P47K [Acidovorax sp. JS42]
gi|120608055|gb|ABM43795.1| cobalamin synthesis protein, P47K [Acidovorax sp. JS42]
Length = 369
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 172/317 (54%), Gaps = 44/317 (13%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQG--QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DL + L L AK+++G FD +VIETTGLA P PV +TF D+ +++
Sbjct: 61 MSNGCICCTIREDLRETLQLLAAKRRKGLVAFDRVVIETTGLADPGPVAQTFFMDDEIAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+D +ITLVD+KHA Q L++ + EA QV +AD+I L+K DLV+E E L
Sbjct: 121 TYLIDSIITLVDAKHAQQQLDDRQ------EARRQVGFADQIFLSKTDLVSEEEKNDLIH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATH----------- 167
R+KH+N AP++ +G V + VL + G++L ++++ +D
Sbjct: 175 RLKHMNPRAPIRAVHFGDVPLAEVLDLRGFNL---NAKLDIDPDFLKEEDAHDHSHCDHD 231
Query: 168 ---------------------HHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVD 206
HE H H H H+H HD V S ++ D +++
Sbjct: 232 HGHCEHEHDHGHDHAHGGHDHGHEHKHDEHCKHPHHHHHDDDVKSFVYRADRAFDPAKLE 291
Query: 207 DWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFI 266
D+L ++ G + R KG+L++ G++++ +FQGVH + G W E R +K+VFI
Sbjct: 292 DFLGAIVNIYGPRMLRYKGVLNMKGTDRKVIFQGVHQLMGSDLGPQWAEGETRQSKMVFI 351
Query: 267 GRNLDETALRKGFKGCL 283
G +L + L++G + CL
Sbjct: 352 GIDLPQDILQQGLEQCL 368
>gi|254246902|ref|ZP_04940223.1| Cobalamin synthesis protein/P47K family protein [Burkholderia
cenocepacia PC184]
gi|124871678|gb|EAY63394.1| Cobalamin synthesis protein/P47K family protein [Burkholderia
cenocepacia PC184]
Length = 392
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 166/311 (53%), Gaps = 38/311 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA KK++G+ FD IVIETTGLA P PV +TF D ++
Sbjct: 92 MSNGCICCTIRGDLARALGDLAAKKREGKLDFDRIVIETTGLANPGPVAQTFFIDSEIAD 151
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + L
Sbjct: 152 DFLLDAVITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKSDLVDDQTVAGLK 204
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
R+ H+N A +K+ +G D+ + + G++L ++++ +D A H H H+
Sbjct: 205 HRLMHMNPKAAIKVVNFGEADIKEIFDLRGFNL---NAKLEIDPDFLAEDDHAHDHHDHD 261
Query: 178 GHHHNHMHDSA------------------------VSSVTIVSEGTLDLDEVDDWLERLI 213
H + D + S ++ D ++++D+L ++
Sbjct: 262 HDHDHANCDHDHGQCAHDHDHGHHHNHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGIL 321
Query: 214 EEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDET 273
+ GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L +
Sbjct: 322 QIYGERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPVEKKTNKMVFIGVDLPQD 381
Query: 274 ALRKGFKGCLA 284
+ G CLA
Sbjct: 382 LITDGLDACLA 392
>gi|70732655|ref|YP_262418.1| GTP-binding protein, YjiA family [Pseudomonas protegens Pf-5]
gi|68346954|gb|AAY94560.1| GTP-binding protein, YjiA family [Pseudomonas protegens Pf-5]
Length = 323
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 103/286 (36%), Positives = 158/286 (55%), Gaps = 27/286 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+KHA HL + A Q+ +ADR++++K DLV E +L +
Sbjct: 121 RYILDGIITLVDAKHAEFHLTQTI-------AQAQIGFADRLLVSKRDLVDEATFEALCQ 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP++L ++G +D+ +L V G++L ++++ S S
Sbjct: 174 RLTRINRRAPIRLVEHGQIDLAELLDVRGFNL---NADLGGGLSLRPVSKAPSV------ 224
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + +E LDLD + +++ L+E+ G+ L R KG+LSV ++ VF
Sbjct: 225 --------DRISSLVLRTEQALDLDRLSEFMNELLEDHGKQLLRYKGVLSVIDEPRRMVF 276
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QGV W E R + +VFI +L E +R+GF+ LA
Sbjct: 277 QGVLKLYGFDWDSEWAEGEVRESVMVFIADDLPEEKIRQGFERMLA 322
>gi|407368531|ref|ZP_11115063.1| cobalamin synthesis protein/P47K [Pseudomonas mandelii JR-1]
Length = 322
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 157/281 (55%), Gaps = 28/281 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV E+ +L+E
Sbjct: 121 RYILDGIITLVDAAHADTHLTQTI-------AQAQIGFADRLLVSKRDLVDESTFTALSE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L V G++L + D + A
Sbjct: 174 RLTRINRRAPIRVVEHGKIDLAELLDVRGFNL-------NADLGGVSLRPVTKAPSIDR- 225
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + ++ LD+D++ +++ L+E+ G+ L R KG+L++ G ++ VF
Sbjct: 226 ----------ISSLVLRTDKPLDIDKLSEFMNELLEDHGKQLLRYKGVLNIVGEPRRMVF 275
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W DE R + +VFI +L E +R+GF
Sbjct: 276 QGVLKLYGFDWDTDWAEDEARESVIVFIADDLPEEKIREGF 316
>gi|77461102|ref|YP_350609.1| cobalamin synthesis protein/P47K [Pseudomonas fluorescens Pf0-1]
gi|77385105|gb|ABA76618.1| putative cobalamin synthesis-related protein [Pseudomonas
fluorescens Pf0-1]
Length = 323
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 154/279 (55%), Gaps = 27/279 (9%)
Query: 4 NGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 NGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRERY 122
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV E +L+ER+
Sbjct: 123 LLDGIITLVDAAHAELHLTQTI-------AQAQIGFADRLLVSKTDLVDEAAFTALSERL 175
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN AP+++ ++G++D+ +L V G++L + + G
Sbjct: 176 TRINRRAPIRVVEHGNIDLAELLDVRGFNL-----------------NADLGGGVSLRPV 218
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
+SS+ + ++ LD+D++ +++ L+EE G+ L R KG+L+++G +++ VFQG
Sbjct: 219 SKAPSIDRISSLVLRTDQPLDIDQLSEFMNELLEEHGKQLLRYKGVLNIAGEDRRLVFQG 278
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
V W E R + +VFI +L E +R GF
Sbjct: 279 VLKLYGFDWDTEWAEGEARESVIVFIADDLPEEKIRAGF 317
>gi|255542064|ref|XP_002512096.1| protein with unknown function [Ricinus communis]
gi|223549276|gb|EEF50765.1| protein with unknown function [Ricinus communis]
Length = 413
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 146/281 (51%), Gaps = 22/281 (7%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CCTV+ LV+ L QL + K+ + DHI+IETTGLA PAP+ D+ + VKLD
Sbjct: 91 NGCICCTVKHSLVQALEQLVQMKESRLDHIIIETTGLANPAPLASVLWLDDQLESTVKLD 150
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTE---TELGSLTERI 120
++T+VD+K+ LN + EA Q+A+AD +ILNK+DLV+ L L + I
Sbjct: 151 SIVTVVDAKNLPFQLNNHRSSTSFPEAFLQIAFADVVILNKVDLVSSEGPEALEELEKEI 210
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHH--ESAHGHHEG 178
+IN++A + + VD+ +L YD ATHH E+ +
Sbjct: 211 HNINSLANIIHSVRCHVDLSKILNCQAYD---------------ATHHSHLETLLEESKS 255
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDL--YRMKGILSVSGSEQQY 236
+HD V +V I +DLD+V WLE ++ +K +D+ YR KG+L V S++ +
Sbjct: 256 LSTRDIHDGGVRTVCICESQQVDLDKVRLWLEEILWDKKDDMDVYRCKGVLKVQNSDELH 315
Query: 237 VFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRK 277
Q V D P + W E +NK+ NLD K
Sbjct: 316 TLQAVREIYDIVPARKWKGSENPMNKIRLCSNNLDFAIFEK 356
>gi|398896375|ref|ZP_10647504.1| putative GTPase, G3E family [Pseudomonas sp. GM55]
gi|398178635|gb|EJM66280.1| putative GTPase, G3E family [Pseudomonas sp. GM55]
Length = 323
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 153/281 (54%), Gaps = 27/281 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + QG FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDQGDIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV E +L+E
Sbjct: 121 RYILDGIITLVDAAHADLHLTQTI-------AQAQIGFADRLLVSKRDLVDEPTFITLSE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ +G +D+ +L V G++L + + G
Sbjct: 174 RLTRINRRAPIRVVDHGKIDLAELLDVRGFNL-----------------NADLGGGVSLR 216
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + +E LD+D++ +++ L+EE G+ L R KG+L++ G ++ VF
Sbjct: 217 PVSQAPSIDRISSLVLRTEKPLDIDKLSEFMNELLEEHGKQLLRYKGVLNILGEPRRMVF 276
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W DE R + +VFI L E +R+GF
Sbjct: 277 QGVLKLYGFDWDTEWADDETRESVIVFIADELPEEKIREGF 317
>gi|398973462|ref|ZP_10684388.1| putative GTPase, G3E family [Pseudomonas sp. GM25]
gi|398142963|gb|EJM31849.1| putative GTPase, G3E family [Pseudomonas sp. GM25]
Length = 324
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 155/284 (54%), Gaps = 27/284 (9%)
Query: 4 NGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 64 NGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRERY 123
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV E +L+ER+
Sbjct: 124 LLDGIITLVDAAHAELHLTQTI-------AQAQIGFADRLLVSKTDLVDEAAFTALSERL 176
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN AP+++ ++G++D+ +L V G++L + + G
Sbjct: 177 TRINRRAPIRVVEHGNIDLAELLDVRGFNL-----------------NADLGGGVSLRPV 219
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
+SS+ + ++ LD+D++ +++ L+EE G+ L R KG+L+++G +++ VFQG
Sbjct: 220 SKAPSIDRISSLVLRTDQPLDIDQLSEFMNELLEEHGKQLLRYKGVLNIAGEDRRLVFQG 279
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
V W E R + +VFI +L E +R GF A
Sbjct: 280 VLKLYGFDWDTEWAEGEARESVIVFIADDLPEEKIRAGFAKVAA 323
>gi|78067908|ref|YP_370677.1| cobalamin synthesis protein/P47K [Burkholderia sp. 383]
gi|77968653|gb|ABB10033.1| Cobalamin synthesis protein/P47K [Burkholderia sp. 383]
Length = 359
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 166/310 (53%), Gaps = 37/310 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA KK++G+ FD IVIETTGLA P PV +TF D ++
Sbjct: 60 MSNGCICCTIRGDLARTLGDLAAKKREGKLDFDRIVIETTGLANPGPVAQTFFIDSEIAD 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + L
Sbjct: 120 DFLLDAVITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKSDLVDDQTVAGLK 172
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
R+ H+N A +K+ +G D+ + + G++L ++++ +D A H H H+
Sbjct: 173 HRLMHMNPKAVIKVVNFGEADIKEIFDLRGFNL---NAKLEIDPDFLAEDDHAHHHHDHD 229
Query: 178 GHHHNHMHDSA-----------------------VSSVTIVSEGTLDLDEVDDWLERLIE 214
H + D + S ++ D ++++D+L +++
Sbjct: 230 HDHDHANCDHDHGQCAHDHDHGHHHHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQ 289
Query: 215 EKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETA 274
GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L +
Sbjct: 290 IYGERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLASKWLPVEKKTNKMVFIGVDLPQDL 349
Query: 275 LRKGFKGCLA 284
+ G CLA
Sbjct: 350 ITDGLDACLA 359
>gi|443468518|ref|ZP_21058729.1| Putative metal chaperone, involved in Zn homeostasis, GTPase of
COG0523 family [Pseudomonas pseudoalcaligenes KF707]
gi|442897684|gb|ELS24558.1| Putative metal chaperone, involved in Zn homeostasis, GTPase of
COG0523 family [Pseudomonas pseudoalcaligenes KF707]
Length = 324
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 152/284 (53%), Gaps = 27/284 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC++ +L K L L ++ FD +VIE TGLA PAPV +TF DE + Q
Sbjct: 63 LANGCVCCSIHVELEKALFLLLERLDAGELAFDRLVIECTGLADPAPVAQTFFADEELCQ 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ +A +HL E A QV +ADR++++K DLV + + +L+E
Sbjct: 123 RYVLDGIITLVDAANAERHLQETI-------AQAQVGFADRLLVSKRDLVDDVQFEALSE 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN APV++ +G +D+ +L V G++L + D + T G +
Sbjct: 176 RLSRINRRAPVRVVDHGRIDLSELLDVRGFNL-------NADVAPAMTLRPLKPAGTPD- 227
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+ ++ + S+ LD++ + ++E L+E G L R KG+L V G ++ VF
Sbjct: 228 ---------RIGTLVLKSDRALDMERLSAFMEGLLESHGNSLLRYKGVLCVEGESRRLVF 278
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
QGV W P E R + +VFIG L E A+R GF+
Sbjct: 279 QGVLRLYGFDWDSEWQPHEARESVMVFIGDQLPEEAIRAGFEAA 322
>gi|228997135|ref|ZP_04156762.1| Cobalamin synthesis protein [Bacillus mycoides Rock3-17]
gi|229004793|ref|ZP_04162525.1| Cobalamin synthesis protein [Bacillus mycoides Rock1-4]
gi|228756456|gb|EEM05769.1| Cobalamin synthesis protein [Bacillus mycoides Rock1-4]
gi|228762619|gb|EEM11539.1| Cobalamin synthesis protein [Bacillus mycoides Rock3-17]
Length = 344
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 158/285 (55%), Gaps = 30/285 (10%)
Query: 2 VNNGCLCCTVRGDLV---KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCTVR DL+ K LL + + + FD +VIETTGLA P P+I+TF D ++
Sbjct: 86 MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS 145
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
K++GV+T+VDS H +H + EA EQ+A+AD +++NK+DLV E E L
Sbjct: 146 AYKINGVVTVVDSYHIHKHFEKGL------EAKEQIAFADMVLVNKLDLVGEEEEKELLT 199
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
++ IN A + VD+ +L + + R E++
Sbjct: 200 ELQGINPTAKLIPTINCEVDIPVLLEIQTFK-TRDTLEIY-------------------- 238
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H H H V S + E LDL ++++W+ +++E GE LYR KGILS+ G + + VF
Sbjct: 239 PHKEHHHLEGVKSFVLREERPLDLQKLNEWMSAVVQELGEYLYRYKGILSIDGVDCRIVF 298
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGVH+ + W E+R++++VFIG+++++ ++ FK C+
Sbjct: 299 QGVHTLFAASYDREWQEGEERVSEVVFIGKDINKEWFQEHFKECV 343
>gi|116691107|ref|YP_836730.1| cobalamin synthesis protein, P47K [Burkholderia cenocepacia HI2424]
gi|116649196|gb|ABK09837.1| cobalamin synthesis protein, P47K [Burkholderia cenocepacia HI2424]
Length = 393
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 168/312 (53%), Gaps = 39/312 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L L AKK++G+ FD IVIETTGLA P PV +TF D ++
Sbjct: 92 MSNGCICCTIRGDLARALGDLAAKKREGKLDFDRIVIETTGLANPGPVAQTFFIDSEIAD 151
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + L
Sbjct: 152 DFLLDAVITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKSDLVDDQTVAGLK 204
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEVHVD-------------- 160
R+ H+N A +K+ +G D+ + + G++L ID + +
Sbjct: 205 HRLMHMNPKAAIKVVNFGEADIKEIFDLRGFNLNAKLEIDPDFLAEDDHAHDHHDHDHDH 264
Query: 161 --------NSHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERL 212
+ CA H H H +HH+ HD + S ++ D ++++D+L +
Sbjct: 265 DHANCDHDHGQCAHDHDHGHHHH---NHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGI 321
Query: 213 IEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDE 272
++ GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L +
Sbjct: 322 LQIYGERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPVEKKTNKMVFIGVDLPQ 381
Query: 273 TALRKGFKGCLA 284
+ G CLA
Sbjct: 382 DLITDGLDACLA 393
>gi|398982937|ref|ZP_10689766.1| putative GTPase, G3E family [Pseudomonas sp. GM24]
gi|399011770|ref|ZP_10714100.1| putative GTPase, G3E family [Pseudomonas sp. GM16]
gi|398117354|gb|EJM07106.1| putative GTPase, G3E family [Pseudomonas sp. GM16]
gi|398157846|gb|EJM46217.1| putative GTPase, G3E family [Pseudomonas sp. GM24]
Length = 323
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 153/279 (54%), Gaps = 27/279 (9%)
Query: 4 NGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 NGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRERY 122
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV E +L+ER+
Sbjct: 123 LLDGIITLVDAAHADVHLTQTI-------AQAQIGFADRLLVSKTDLVDEATFNALSERL 175
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN APV++ ++G++D+ +L V G++L + + G
Sbjct: 176 TRINRRAPVRVVEHGNIDLAELLDVRGFNL-----------------NADLGGGLSLRPV 218
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
+SS+ + ++ LD+D++ +++ L+EE G+ L R KG+L+++G +++ VFQG
Sbjct: 219 SKAPSIDRISSLVLRTDQPLDIDQLSEFMNELLEEHGKQLLRYKGVLNIAGEDRRLVFQG 278
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
V W E R + +VFI L E +R GF
Sbjct: 279 VLKLYGFDWDTEWAEGEARESVIVFIADELPEEKIRAGF 317
>gi|423097426|ref|ZP_17085222.1| GTP-binding protein, YjiA family [Pseudomonas fluorescens Q2-87]
gi|397885707|gb|EJL02190.1| GTP-binding protein, YjiA family [Pseudomonas fluorescens Q2-87]
Length = 322
Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 156/285 (54%), Gaps = 27/285 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LANGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEDLRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG++TLVD+ HA HL + A QV +ADR++L+K DLV ++ +L E
Sbjct: 121 RYILDGILTLVDAAHADVHLTQAI-------AQAQVGFADRLLLSKTDLVDAAQVQALGE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L + G++L N+ G
Sbjct: 174 RLTRINRRAPIRVVEHGKIDLAELLDIRGFNL----------NADLGAGFSLRPVGKATP 223
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + ++ LD++++ +++ +L+EE G+ L R KG+L+++G ++ VF
Sbjct: 224 GDR-------ISSLVLRTDKPLDIEKLSEFMNQLLEEHGKQLLRYKGVLNIAGEPRRLVF 276
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGV W P E R + +VFI L E +R GF+ L
Sbjct: 277 QGVLKLYGFDWDTDWAPGEARESVIVFIADELPEEKIRAGFEAIL 321
>gi|337278588|ref|YP_004618059.1| hypothetical protein Rta_09550 [Ramlibacter tataouinensis TTB310]
gi|334729664|gb|AEG92040.1| Conserved hypothetical protein [Ramlibacter tataouinensis TTB310]
Length = 346
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 169/295 (57%), Gaps = 21/295 (7%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQG--QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DL L L AK+++G F+ +VIETTGLA P PV +TF D+ +++
Sbjct: 61 MSNGCICCTIREDLRSTLQLLAAKRRKGLLDFERVVIETTGLADPGPVAQTFFMDDEIAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD ++TLVD+KHA + L+E + EA QV +AD+I ++K DLV E +L
Sbjct: 121 TYLLDSILTLVDAKHAPRQLDERQ------EARRQVGFADQIFVSKTDLVAGDEAQALMH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHC---------ATHHH 169
R++H+N AP K +G V + V + G++L ++++ +D H H
Sbjct: 175 RLRHMNPRAPQKAVHFGEVAVSEVFDLRGFNL---NAKLDIDPDFLKEDGHDHQHQGHDH 231
Query: 170 ESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSV 229
+ HG H H H+H HD V S S+ D +++D+L ++ G + R KG+L++
Sbjct: 232 DHEHGEHCDHPHHHHHDDDVKSFVFRSDRPFDPAKLEDFLGAVVNIYGPRMLRYKGVLNM 291
Query: 230 SGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
G++++ +FQGVH + G AW E R +K+VFIG +L +G + CL+
Sbjct: 292 KGTDRKVIFQGVHQLMGSDLGPAWAEGEARTSKMVFIGIDLPRDIFMQGLQQCLS 346
>gi|47086079|ref|NP_998418.1| COBW domain containing [Danio rerio]
gi|41107660|gb|AAH65429.1| COBW domain containing [Danio rerio]
Length = 366
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 163/291 (56%), Gaps = 33/291 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + +K + L +KK G+FD+I++ETTGLA P V F D + V
Sbjct: 85 LRNGCLCCSVKDNGLKAIENLMEKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDVY 143
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG++T++D+K+ +QHL E KP ++NEA Q+A AD I+NK DLV ETEL L + ++
Sbjct: 144 LDGIVTVIDAKYGLQHLTEEKPEGLINEAARQIALADLTIINKTDLVHETELLKLRDTVR 203
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDL---ERIDSEVHVDNSHCATHHHESAHGHHEG 178
IN + + + VD+ VL + +D ER+ ++ + +
Sbjct: 204 SINGLVKILETQKSRVDLSEVLDLHSFDTKDGERLTKKLQLVKT---------------- 247
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK--------GEDLYRMKGILSVS 230
H+ D ++ ++T G++ D ++ +++ L+ EK + R+KGILS+
Sbjct: 248 -SQPHL-DKSMLTITFEVPGSVSEDLLNIFIQELLWEKTFKNKAGLPMTVIRLKGILSLQ 305
Query: 231 GSEQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
+++ + QGVH L+ P + W E R+N+LVFIGRNLD L+K F
Sbjct: 306 QKQKKVMLQGVHELYELEETP-EFWADQEPRLNRLVFIGRNLDGEILKKEF 355
>gi|398922219|ref|ZP_10660174.1| putative GTPase, G3E family [Pseudomonas sp. GM49]
gi|398163257|gb|EJM51424.1| putative GTPase, G3E family [Pseudomonas sp. GM49]
Length = 323
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 157/281 (55%), Gaps = 27/281 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + QG FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDQGDIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV E +L+E
Sbjct: 121 RYILDGIITLVDAAHADLHLTQTI-------AQAQIGFADRLLVSKRDLVDEPIFTALSE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ +G +D+ +L V G++L ++++ S S
Sbjct: 174 RLTRINRRAPIRVVDHGKIDLAELLDVRGFNL---NADLGGGVSLRPVSQAPSI------ 224
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + + LD+D++ +++ L+EE G+ L R KG+L++ G ++ VF
Sbjct: 225 --------DRISSLVLRTGKPLDIDKLSEFMNELLEEHGKQLLRYKGVLNILGEPRRMVF 276
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV WG DE R + +VFI +L E +R+GF
Sbjct: 277 QGVLKLYGFDWDTEWGNDESRESVIVFIADDLPEEKIREGF 317
>gi|171060504|ref|YP_001792853.1| cobalamin synthesis protein P47K [Leptothrix cholodnii SP-6]
gi|170777949|gb|ACB36088.1| cobalamin synthesis protein P47K [Leptothrix cholodnii SP-6]
Length = 343
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 167/287 (58%), Gaps = 10/287 (3%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CC++R DL L LA ++++G+ FD +VIETTGLA P PV +TF D+ V++
Sbjct: 63 LSNGCICCSIREDLRSTLSDLATRRRKGELDFDRVVIETTGLADPGPVAQTFFMDDEVAE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD V+TLVD+KHA + L++ + EA Q+ +AD++ ++K DLV +L +L
Sbjct: 123 SYLLDSVLTLVDAKHAQKQLDDRQ------EARRQIGFADQLFISKADLVDAADLEALAH 176
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE-RIDSEVHVDNSHCATHHHESAHGHHE 177
R+KH+N AP + +G V + V + G++L +++ + ++ H H H
Sbjct: 177 RLKHMNPRAPQRPVNFGEVSIAEVFDLRGFNLNAKLEIDPEFLSADEHAHDHHDHDHEHC 236
Query: 178 GHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYV 237
H H+H HD V S + +++D+L +++ G + R KG+L + G++++ +
Sbjct: 237 DHPHHHHHDDDVKSFVFRASRPFSPAKLEDFLGSVVQIYGPRMLRYKGVLHMQGTDRKVI 296
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
FQGVH + G W E+R +K+VFIG +L ++G + CLA
Sbjct: 297 FQGVHQLMGSDLGPKWEAAEERGSKMVFIGIDLPREVFQQGLEQCLA 343
>gi|398931170|ref|ZP_10665029.1| putative GTPase, G3E family [Pseudomonas sp. GM48]
gi|398164313|gb|EJM52455.1| putative GTPase, G3E family [Pseudomonas sp. GM48]
Length = 323
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 153/281 (54%), Gaps = 27/281 (9%)
Query: 2 VNNGCLCCTVRGDLVK---MLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K +LL+ + FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDRGDIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV E +L+E
Sbjct: 121 RYILDGIITLVDAAHAELHLTQTI-------AQAQIGFADRLLVSKRDLVDEPTFTALSE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ +G +D+ +L V G++L + + G
Sbjct: 174 RLTRINRRAPIRVVDHGRIDLAELLDVRGFNL-----------------NADLGGGVSLR 216
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + ++ LD+D++ +++ L+EE G+ L R KG+L++ G ++ VF
Sbjct: 217 PVSQAPSIDRISSLVLRTDKALDIDKLSEFMNELLEEHGKQLLRYKGVLNILGEPRRMVF 276
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W DE R + +VFI +L E +R+GF
Sbjct: 277 QGVLKLYGFDWDTEWADDETRESVIVFIADDLPEEKIREGF 317
>gi|148549703|ref|YP_001269805.1| cobalamin synthesis protein, P47K [Pseudomonas putida F1]
gi|395445376|ref|YP_006385629.1| cobalamin synthesis protein, P47K [Pseudomonas putida ND6]
gi|397693581|ref|YP_006531461.1| cobalamin synthesis protein, P47K [Pseudomonas putida DOT-T1E]
gi|148513761|gb|ABQ80621.1| cobalamin synthesis protein, P47K [Pseudomonas putida F1]
gi|388559373|gb|AFK68514.1| cobalamin synthesis protein, P47K [Pseudomonas putida ND6]
gi|397330311|gb|AFO46670.1| cobalamin synthesis protein, P47K [Pseudomonas putida DOT-T1E]
Length = 325
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/286 (34%), Positives = 157/286 (54%), Gaps = 25/286 (8%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC++ GDL + L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LANGCVCCSIHGDLTRALYLLLERLDAGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A QV +ADR++L+K DLV T + +L E
Sbjct: 121 RYILDGIITLVDAAHAELHLTQTI-------AQAQVGFADRLLLSKTDLVEPTAVEALRE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN+ A +++ ++G +D+ +L V G++L + ++ V+ + A
Sbjct: 174 RLARINSRAAIRVVEHGCIDLAELLDVRGFNL---NPDLGVNLKPMLQPVLKPATPDR-- 228
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+S++ + +E LD+D + ++ L+E G+ L R KG+L+++G E++ VF
Sbjct: 229 ----------ISTMVLRTETPLDIDRLSSFMNELLETHGKQLLRYKGVLNIAGEERKLVF 278
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QGV W E R + +VFI L E +R GF+ A
Sbjct: 279 QGVLKLYGFDWDAEWAAGEARESVMVFIADELPEATIRAGFEAMAA 324
>gi|398837905|ref|ZP_10595189.1| putative GTPase, G3E family [Pseudomonas sp. GM102]
gi|398117463|gb|EJM07214.1| putative GTPase, G3E family [Pseudomonas sp. GM102]
Length = 323
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 155/281 (55%), Gaps = 27/281 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV E +L+E
Sbjct: 121 RYILDGIITLVDAAHADLHLTQTI-------AQAQIGFADRLLVSKRDLVDEPTFTALSE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ +G +D+ +L V G++L +D ++
Sbjct: 174 RLTRINRRAPIRVVDHGKIDLAELLDVRGFNLN-----ADLDGGMSLRPVSKAPSIDR-- 226
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + ++ LD+D++ +++ L+EE G+ L R KG+L++ G ++ VF
Sbjct: 227 ----------ISSLVLRTDKPLDIDKLSEFMNELLEEHGKQLLRYKGVLNILGEPRRMVF 276
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W DE R + +VFI +L E +R+GF
Sbjct: 277 QGVLKLYGFDWDTEWADDETRESVIVFIADDLPEEKIREGF 317
>gi|222112163|ref|YP_002554427.1| cobalamin synthesis protein p47k [Acidovorax ebreus TPSY]
gi|221731607|gb|ACM34427.1| cobalamin synthesis protein P47K [Acidovorax ebreus TPSY]
Length = 372
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 172/320 (53%), Gaps = 47/320 (14%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQG--QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+R DL + L L AK+++G FD +VIETTGLA P PV +TF D+ +++
Sbjct: 61 MSNGCICCTIREDLRETLQLLAAKRRKGLVAFDRVVIETTGLADPGPVAQTFFMDDEIAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+D +ITLVD+KHA Q L++ + EA QV +AD+I L+K DLV+E E L
Sbjct: 121 TYLIDSIITLVDAKHAQQQLDDRQ------EARRQVGFADQIFLSKTDLVSEEEKNDLIH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATH----------- 167
R+KH+N AP++ +G V + VL + G++L ++++ +D
Sbjct: 175 RLKHMNPRAPIRAVHFGDVPLAEVLDLRGFNL---NAKLDIDPDFLKEEDAHDHSHCDHD 231
Query: 168 ------------------------HHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLD 203
HE H H H H+H HD V S ++ D
Sbjct: 232 HGHCEHEHDHGHGHAHGEHGGHDHGHEHKHDEHCKHPHHHHHDDDVKSFVYRADRAFDPA 291
Query: 204 EVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKL 263
+++D+L ++ G + R KG+L++ G++++ +FQGVH + G W E R +K+
Sbjct: 292 KLEDFLGAIVNIYGPRMLRYKGVLNMKGTDRKVIFQGVHQLMGSDLGPQWAEGEARQSKM 351
Query: 264 VFIGRNLDETALRKGFKGCL 283
VFIG +L + L++G + CL
Sbjct: 352 VFIGIDLPQDILQQGLEQCL 371
>gi|170734439|ref|YP_001766386.1| cobalamin synthesis protein P47K [Burkholderia cenocepacia MC0-3]
gi|169817681|gb|ACA92264.1| cobalamin synthesis protein P47K [Burkholderia cenocepacia MC0-3]
Length = 395
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 168/314 (53%), Gaps = 41/314 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L L AKK++G+ FD IVIETTGLA P PV +TF D ++
Sbjct: 92 MSNGCICCTIRGDLARALGDLAAKKREGKLDFDRIVIETTGLANPGPVAQTFFIDSEIAD 151
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + L
Sbjct: 152 DFLLDAVITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKSDLVDDQTVAGLK 204
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEVHVD-------------- 160
R+ H+N A +K+ +G D+ + + G++L ID + +
Sbjct: 205 HRLMHMNPKAAIKVVNFGEADIKEIFDLRGFNLNAKLEIDPDFLAEDDHAHDHHDHDHDH 264
Query: 161 ----------NSHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLE 210
+ CA H H H +HH+ HD + S ++ D ++++D+L
Sbjct: 265 DHDHANCDHDHGQCAHDHDHGHHHH---NHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLG 321
Query: 211 RLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNL 270
+++ GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L
Sbjct: 322 GILQIYGERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPVEKKTNKMVFIGVDL 381
Query: 271 DETALRKGFKGCLA 284
+ + G CLA
Sbjct: 382 PQDLITDGLDACLA 395
>gi|73539869|ref|YP_294389.1| cobalamin synthesis protein/P47K:cobalamin synthesis CobW,
C-terminal, partial [Ralstonia eutropha JMP134]
gi|72117282|gb|AAZ59545.1| Cobalamin synthesis protein/P47K:Cobalamin synthesis CobW,
C-terminal [Ralstonia eutropha JMP134]
Length = 357
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/306 (36%), Positives = 164/306 (53%), Gaps = 33/306 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDLV+ L L ++ +FD +VIETTG+A P PV +TF D+ ++
Sbjct: 62 MSNGCICCTIRGDLVQALSTLMTRRDAGEIEFDRVVIETTGVANPGPVAQTFFMDDEIAS 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD VITLVD+KHA L++ + EA QV +AD I + K DLV+E E+ L
Sbjct: 122 RYLLDAVITLVDAKHAHLQLDKQE------EAQRQVGFADAIFITKSDLVSEAEVAELRH 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEV-----------------H 158
R+ H+N AP++ A +G +D + + G++L ID E H
Sbjct: 176 RLLHMNPRAPIRQANFGETPIDTIFDLRGFNLNAKLEIDPEFLSADDHDHGHGHDHEHEH 235
Query: 159 VDNSHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGE 218
HC T E H H HHH+H H ++S S+ +++++L ++ GE
Sbjct: 236 EHGEHCGT---ECGHDHSHDHHHHHHHTDRIASFVFRSDKPFHYGKLEEFLSGILAVYGE 292
Query: 219 DLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKG 278
L R KG+L + G +++ VFQGVH + G W +E K+VFIG +L A+ KG
Sbjct: 293 KLLRYKGVLYMEGVDRKVVFQGVHQLMGSDVGAKW-EEETPGTKMVFIGVDLPRDAILKG 351
Query: 279 FKGCLA 284
CLA
Sbjct: 352 LGNCLA 357
>gi|166240442|ref|XP_640518.2| COBW domain-containing protein [Dictyostelium discoideum AX4]
gi|165988600|gb|EAL66556.2| COBW domain-containing protein [Dictyostelium discoideum AX4]
Length = 396
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 170/321 (52%), Gaps = 42/321 (13%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CCTV+ D ++ + L K+ +FD+I+IE+TG+ P + + DE + + D
Sbjct: 76 NGCICCTVKDDFLQSIEDLLKRSD-KFDYILIESTGMGDPGQISASLWVDEELESPIYFD 134
Query: 64 GVITLVDSKHAMQHLNEVK------------------------PRFVVNEAVEQVAYADR 99
+ITLVDSKH +H+ + K ++ E Q+A+AD
Sbjct: 135 SIITLVDSKHIEKHIEKSKLNSNANNNNNKKVDDEDIEIHGTDIKYYSTEVERQIAFADI 194
Query: 100 IILNKIDLVTET----ELGSLTERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDL----- 150
I+LNKIDL+ ++ E+ ++TERIK IN +A + + V +D VL V Y+
Sbjct: 195 ILLNKIDLLDQSNLNNEIKTITERIKSINPIAKIITTERSVVPLDKVLDVKAYNPNIELL 254
Query: 151 -ERIDS-----EVHVDNSHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDE 204
E +D + + H ++ ES+ + H +++V I +G +DL E
Sbjct: 255 KEYLDQFQKGQNSNNQHQHQHNNNEESSSCKECSLTNTSNHSKFINTVCITEDGDIDLTE 314
Query: 205 VDDWLERLI-EEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCP-GKAWGPDEKRINK 262
+ W+ L+ EEK + ++R KG++SV G +++Y+ QGV++T + P G W DEKR NK
Sbjct: 315 FNRWIGNLLWEEKKDCIFRCKGLISVKGQDEKYILQGVYATFEVLPSGLLWSKDEKRHNK 374
Query: 263 LVFIGRNLDETALRKGFKGCL 283
+V IG +L++ L + FK L
Sbjct: 375 IVLIGESLNQNELEQSFKNKL 395
>gi|426411596|ref|YP_007031695.1| cobalamin synthesis protein/P47K [Pseudomonas sp. UW4]
gi|426269813|gb|AFY21890.1| cobalamin synthesis protein/P47K [Pseudomonas sp. UW4]
Length = 323
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 152/281 (54%), Gaps = 27/281 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + QG FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDQGDIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV E +L+
Sbjct: 121 RYILDGIITLVDAAHADSHLTQTI-------AQAQIGFADRLLVSKRDLVDEPTFTALSN 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ +G +D+ +L V G++L + + G
Sbjct: 174 RLTRINRRAPIRVVDHGKIDLAELLDVRGFNL-----------------NADLGGGVSLR 216
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + +E LD+D++ +++ L+E G+ L R KG+LS+ G ++ VF
Sbjct: 217 PVSQAPSIDRISSLVLRTEKPLDIDKLSEFMNELLEAHGKQLLRYKGVLSILGEPRRMVF 276
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W DE R + +VFI +L E +R+GF
Sbjct: 277 QGVLKLYGFDWDTEWAEDEVRESVIVFIADDLPEEKIREGF 317
>gi|115353186|ref|YP_775025.1| cobalamin synthesis protein, P47K [Burkholderia ambifaria AMMD]
gi|115283174|gb|ABI88691.1| cobalamin synthesis protein, P47K [Burkholderia ambifaria AMMD]
Length = 388
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 166/310 (53%), Gaps = 37/310 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA KK++G+ FD IVIETTGLA P PV +TF D ++
Sbjct: 89 MSNGCICCTIRGDLARALGDLAAKKREGKLDFDRIVIETTGLANPGPVAQTFFIDSEIAD 148
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + L
Sbjct: 149 DFLLDAVITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKSDLVDDQTVAGLK 201
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
R+ H+N A +K+ +G D+ + + G++L ++++ +D A H AH H
Sbjct: 202 HRLMHMNPKATIKIVNFGEADIKEIFDLRGFNL---NAKLEIDPDFLAEDDHAHAHHEHG 258
Query: 178 GHHHNHMHDSA-----------------------VSSVTIVSEGTLDLDEVDDWLERLIE 214
H + D + S ++ D ++++D+L +++
Sbjct: 259 HDHDHADCDHDHGQCAHDHDHGHHHHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQ 318
Query: 215 EKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETA 274
GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L +
Sbjct: 319 IYGERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPVEKKTNKMVFIGVDLPQDL 378
Query: 275 LRKGFKGCLA 284
+ G CLA
Sbjct: 379 ITDGLDACLA 388
>gi|348573079|ref|XP_003472319.1| PREDICTED: COBW domain-containing protein 2-like [Cavia porcellus]
Length = 395
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 160/288 (55%), Gaps = 27/288 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LGNGCLCCSVKDSGLRAIENLMQKK-GKFDYILLETTGLADPGAVASIFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DL++E EL L I+
Sbjct: 162 LDGIITVVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLISEEELNKLRAIIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + VD+ +L DL DS + H +A H
Sbjct: 222 SINGLGKILETQRSRVDLTNIL-----DLHAFDSLSGISFQE-KLQHVPTAQPH------ 269
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
D ++ ++T G + + ++ +++ L+ EK ++ R+KG++S++
Sbjct: 270 ---LDRSIVTITFEVPGNVKEESLNVFIQNLLWEKNVRNKDGHCMEVIRLKGLVSITDKP 326
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LVFIGRNLD+ L++ F
Sbjct: 327 QQVIVQGVHELYDLEETP-VSWTDDTERTNRLVFIGRNLDKDILKQLF 373
>gi|398943216|ref|ZP_10670733.1| putative GTPase, G3E family [Pseudomonas sp. GM41(2012)]
gi|398159507|gb|EJM47805.1| putative GTPase, G3E family [Pseudomonas sp. GM41(2012)]
Length = 323
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 155/281 (55%), Gaps = 27/281 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV E +L+E
Sbjct: 121 RYILDGIITLVDAAHADTHLTQTI-------AQAQIGFADRLLVSKRDLVDEATFTALSE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L V G++L + + G
Sbjct: 174 RLTRINRRAPIRVVEHGKIDLAELLDVRGFNL-----------------NADLGGGVSLR 216
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + ++ LD+D++ +++ L+E+ G+ L R KG+L++ G ++ VF
Sbjct: 217 PVSKAPSIDRISSLVLRTDKPLDIDKLSEFMNELLEDHGKQLLRYKGVLNILGEPRRMVF 276
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W DE R + +VFI +L E +R+GF
Sbjct: 277 QGVLKLYGFDWDTEWADDETRESVIVFIADDLPEEKIREGF 317
>gi|421522959|ref|ZP_15969599.1| cobalamin synthesis protein, P47K [Pseudomonas putida LS46]
gi|402753452|gb|EJX13946.1| cobalamin synthesis protein, P47K [Pseudomonas putida LS46]
Length = 325
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 156/283 (55%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC++ GDL + L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LANGCVCCSIHGDLTRALYLLLERLDAGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A QV +ADR++L+K DLV T + +L E
Sbjct: 121 RYILDGIITLVDAAHAELHLTQTI-------AQAQVGFADRLLLSKTDLVEPTAVEALRE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN+ A +++ ++G +D+ +L V G++L + ++ V+ + A
Sbjct: 174 RLARINSRAAIRVVEHGCIDLAELLDVRGFNL---NPDLGVNLKPMLQPVLKPATPDR-- 228
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+S++ + +E LD+D + ++ L+E G+ L R KG+L+++G E++ VF
Sbjct: 229 ----------ISTMVLRTETPLDIDRLSSFMNELLETHGKQLLRYKGVLNIAGEERKLVF 278
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV W E R + +VFI L E +R GF+
Sbjct: 279 QGVLKLYGFDWDAEWAAGEARESVMVFIADELPEATIRAGFEA 321
>gi|227114427|ref|ZP_03828083.1| putative GTP-binding protein YjiA [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 285
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 155/287 (54%), Gaps = 31/287 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT +L LL L FDH++IE TG+A P PV +TF + +++ +
Sbjct: 26 LSNGCICCTQSNELADALLDLVDGVDNGTLDFDHVIIECTGMADPGPVAQTFFSHDVICE 85
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA Q L++ F + ++ Q+ YADRI+L K D+ E E +L
Sbjct: 86 RFVLDGIITLVDAVHAQQQLDQ----FTIAQS--QIGYADRILLTKTDVAAEDE--TLLP 137
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDL-ERIDSEVHVDNSHCATHHHESAHGHHE 177
R++ INA AP+ +G +D+ + + G+ L +++D + V T ++
Sbjct: 138 RLQRINARAPIYPVVHGDIDLSVLFNIDGFVLSDKLDVKTPVFRFVAPTQNN-------- 189
Query: 178 GHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYV 237
V S+ + E ++L V D +E L+ + ++L R KGIL+++G +++ +
Sbjct: 190 -----------VQSIVVYLEKAVELQSVSDVMENLLLQFSDNLLRYKGILAINGDDRRLL 238
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
FQGV + W PDE+R + LVFIG +L E +R F A
Sbjct: 239 FQGVQRLYSADWDREWQPDEERKSVLVFIGVDLPEQEIRDAFARLTA 285
>gi|107024020|ref|YP_622347.1| cobalamin synthesis protein, P47K [Burkholderia cenocepacia AU
1054]
gi|105894209|gb|ABF77374.1| cobalamin synthesis protein, P47K [Burkholderia cenocepacia AU
1054]
Length = 393
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 165/312 (52%), Gaps = 39/312 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L L AKK++G+ FD IVIETTGLA P PV +TF D ++
Sbjct: 92 MSNGCICCTIRGDLARALGDLAAKKREGKLDFDRIVIETTGLANPGPVAQTFFIDSEIAD 151
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD ITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + L
Sbjct: 152 DFLLDAAITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKSDLVDDQTVAGLK 204
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEVHVD-------------- 160
R+ H+N A +K+ +G D+ + + G++L ID + +
Sbjct: 205 HRLMHMNPKAAIKVVNFGEADIKEIFDLRGFNLNAKLEIDPDFLAEDDHAHDHHDHDHDH 264
Query: 161 --------NSHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERL 212
+ CA H H H+ H H+ + S ++ D ++++D+L +
Sbjct: 265 DHANCDHDHGQCAHDHDHGHHHHNHHHAHHDDK---IKSFVYRNDRPFDPNKLEDFLGGI 321
Query: 213 IEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDE 272
++ GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L +
Sbjct: 322 LQIYGERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPVEKKTNKMVFIGVDLPQ 381
Query: 273 TALRKGFKGCLA 284
+ G CLA
Sbjct: 382 DLITDGLDACLA 393
>gi|398907695|ref|ZP_10654014.1| putative GTPase, G3E family [Pseudomonas sp. GM50]
gi|398171130|gb|EJM59042.1| putative GTPase, G3E family [Pseudomonas sp. GM50]
Length = 323
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 153/281 (54%), Gaps = 27/281 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV E +L+E
Sbjct: 121 RYILDGIITLVDAAHADLHLTQTI-------AQAQIGFADRLLVSKRDLVDEPTFTALSE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ +G +D+ +L V G++L + + G
Sbjct: 174 RLTRINRRAPIRVVDHGKIDLAELLDVRGFNL-----------------NADLGGGVSLR 216
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + ++ LD+D++ +++ L+EE G+ L R KG+L++ G ++ VF
Sbjct: 217 PVSKAPSIDRISSLVLRTDKPLDIDKLSEFMNELLEEHGKQLLRYKGVLNILGEPRRMVF 276
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W DE R + +VFI L E +R+GF
Sbjct: 277 QGVLKLYGFDWDTEWADDEARESVIVFIADELPEEKIREGF 317
>gi|300692944|ref|YP_003753939.1| cobalamin synthesis protein CobW [Ralstonia solanacearum PSI07]
gi|299080004|emb|CBJ52679.1| putative Cobalamin synthesis protein cobW homolog; putative GTPase
[Ralstonia solanacearum PSI07]
gi|344168531|emb|CCA80821.1| putative Cobalamin synthesis protein cobW homolog; putative GTPase
[blood disease bacterium R229]
Length = 356
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 163/305 (53%), Gaps = 32/305 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKK---QGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDLV L L ++ + QFD +VIETTG+A P PV +TF D+ ++
Sbjct: 62 MSNGCICCTIRGDLVAALSDLLTRRDKGELQFDRVVIETTGVANPGPVAQTFFMDDEIAG 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD VITLVD+KH Q L++ + EA QV +AD I + K DLV+ ++ +L
Sbjct: 122 RYLLDAVITLVDAKHGNQQLDKQE------EAQRQVGFADAIFITKGDLVSTDDVDALRH 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVD------------------ 160
R+ H+N AP++ A +G +D + + G++L ++++ +D
Sbjct: 176 RLLHMNPRAPIRTANFGDAPIDTIFDLRGFNL---NAKLEIDPDFLREDDHDHDHDHDHA 232
Query: 161 -NSHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGED 219
+ C H H HH + H ++S SE + +++++L ++ GE
Sbjct: 233 CSPDCDHGHDHDHGHGHHHHHGHAHHTDRIASFVFRSERPFNYGKLEEFLSGVLNVYGEK 292
Query: 220 LYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
L R KG+L + G +++ VFQGVH + G W E N++VFIG +L + KG
Sbjct: 293 LLRYKGVLYMEGVDRKVVFQGVHQLMGSDVGGKWD-GETPGNRMVFIGVDLPRDTILKGL 351
Query: 280 KGCLA 284
+ CLA
Sbjct: 352 ENCLA 356
>gi|167835017|ref|ZP_02461900.1| cobalamin synthesis protein, P47K [Burkholderia thailandensis
MSMB43]
gi|424901751|ref|ZP_18325267.1| cobalamin synthesis protein, P47K [Burkholderia thailandensis
MSMB43]
gi|390932126|gb|EIP89526.1| cobalamin synthesis protein, P47K [Burkholderia thailandensis
MSMB43]
Length = 357
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 164/308 (53%), Gaps = 35/308 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL ++L +LA K+ FD +VIETTGLA P PV +TF D ++
Sbjct: 60 MSNGCICCTIRGDLARVLAELAANKRDGKFDFDRVVIETTGLANPGPVAQTFFIDSEIAD 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + L
Sbjct: 120 EFLLDAVITLVDAKHADTQLDE-------HEVVQRQVGFADRLFITKADLVDDETVSELK 172
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
R+ H+N A +K+ +G D+ + + G++L ++++ +D A HE AH H
Sbjct: 173 HRLLHMNPRAAIKVVNFGDADIKEIFDLRGFNL---NAKLEIDPDFLAEDEHEHAHHHDH 229
Query: 178 GHHHNHMHDSA---------------------VSSVTIVSEGTLDLDEVDDWLERLIEEK 216
H H H + S ++ D ++++D+L +++
Sbjct: 230 DHDHAHCDHDHGHCEHDHEHGHHHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQIY 289
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L +
Sbjct: 290 GERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPVEKKTNKMVFIGVDLPRDLIT 349
Query: 277 KGFKGCLA 284
G CLA
Sbjct: 350 DGLDACLA 357
>gi|431804424|ref|YP_007231327.1| cobalamin synthesis protein P47K [Pseudomonas putida HB3267]
gi|430795189|gb|AGA75384.1| cobalamin synthesis protein P47K [Pseudomonas putida HB3267]
Length = 325
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 153/286 (53%), Gaps = 25/286 (8%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC++ GDL + L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LANGCVCCSIHGDLTRALYLLLERLDAGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A QV +ADR++L+K DLV + +L E
Sbjct: 121 RYILDGIITLVDAAHAELHLTQTI-------AQAQVGFADRLLLSKTDLVEPAAVEALRE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN A +++ ++G +D+ +L V G++L N + + +
Sbjct: 174 RLARINGRAAIRVVEHGRIDLAELLDVRGFNL----------NPDLGANLKPALRPLLKP 223
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+ +S++ + +E LD+D + D++ L+E G+ L R KG+L+++G ++ VF
Sbjct: 224 ATPDR-----ISTLVLRTESALDIDRLSDFMNELLETHGKQLLRYKGVLNIAGEARKLVF 278
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QGV W E R + +VFI L E +R GF+ A
Sbjct: 279 QGVLKLYGFDWDAEWAEGETRESVMVFIADELPEATIRAGFEALAA 324
>gi|94309072|ref|YP_582282.1| cobalamin synthesis protein [Cupriavidus metallidurans CH34]
gi|93352924|gb|ABF07013.1| cobalamin synthesis protein, P47K (putative GTPase) [Cupriavidus
metallidurans CH34]
Length = 363
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/309 (37%), Positives = 169/309 (54%), Gaps = 33/309 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKK-QGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDLV+ L L ++ +G+ FD +VIETTG+A P PV +TF DE ++
Sbjct: 62 MSNGCICCTIRGDLVQALSDLVTQRDEGKIAFDRVVIETTGVANPGPVAQTFFMDEEIAS 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD VITLVD+KHA L++ + EA QV +AD I + K DLV+E E+ L
Sbjct: 122 RYLLDAVITLVDAKHANLQLDKQE------EAQRQVGFADAIFITKADLVSEAEVADLRH 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEV-----------HVDNSHC 164
R+ H+N AP+ A +G +D + + G++L ID + H HC
Sbjct: 176 RLLHMNPRAPINAAHFGEAPIDLIFDLRGFNLNEKLEIDPDFLRADEHDHEHDHEHGEHC 235
Query: 165 AT---------HHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEE 215
T H H+ HGH HHH+H H ++S S+ +++++L ++
Sbjct: 236 GTDCGHDHGHEHGHDHGHGHAHDHHHHHHHTDRIASFVFRSDKPFHYGKLEEFLSGILSV 295
Query: 216 KGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETAL 275
GE L R KG+L + G +++ VFQGVH + G W DE+ K+VFIG +L A+
Sbjct: 296 YGEKLLRYKGVLYMEGVDRKVVFQGVHQLMGSDIGAKW-EDEQPGTKMVFIGVDLPRDAI 354
Query: 276 RKGFKGCLA 284
KG CLA
Sbjct: 355 LKGLAACLA 363
>gi|339905982|ref|YP_002913140.2| Cobalamin synthesis protein P47K [Burkholderia glumae BGR1]
gi|339305136|gb|ACR30436.2| Cobalamin synthesis protein P47K [Burkholderia glumae BGR1]
Length = 387
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 162/310 (52%), Gaps = 34/310 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA +K+ FD +VIETTGLA P PV +TF D ++
Sbjct: 85 MSNGCICCTIRGDLARALGDLAARKRDGKLDFDRVVIETTGLANPGPVAQTFFIDSEIAD 144
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD +ITLVD+KHA L+E +E V+ QV +ADR+ + K DLV E + +L
Sbjct: 145 EFLLDAIITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKADLVDEAAIAALK 197
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEVHVDNS------------ 162
R+ H+N A V+ +G D+ + + G++L ID + V++
Sbjct: 198 HRLLHMNPKAAVRQVNFGDADIKEIFDLRGFNLNAKLEIDPDFLVEDDHAHHDHDHDHGH 257
Query: 163 -----HCATHHHESAHGHHEGHHHNHMHDSA---VSSVTIVSEGTLDLDEVDDWLERLIE 214
+C H H H H H+H H + S ++ D +++D+L +++
Sbjct: 258 GHDHANCDHDHGHCDHDHGHDHGHHHHHAHHDDKIKSFVYRNDRPFDPTKLEDFLGGILQ 317
Query: 215 EKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETA 274
GE L R KG+L + ++ VFQGVH + W P EK+ NK+VFIG +L +
Sbjct: 318 IYGERLLRYKGVLYMKAVDRNVVFQGVHQMMGSDLASKWLPAEKKTNKMVFIGIDLPQDL 377
Query: 275 LRKGFKGCLA 284
+ G CLA
Sbjct: 378 ITDGLDACLA 387
>gi|26991323|ref|NP_746748.1| CobW/P47K family protein [Pseudomonas putida KT2440]
gi|24986383|gb|AAN70212.1|AE016660_9 CobW/P47K family protein [Pseudomonas putida KT2440]
Length = 323
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 156/286 (54%), Gaps = 25/286 (8%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC++ GDL + L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 59 LANGCVCCSIHGDLTRALYLLLERLDAGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 118
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A QV +ADR++L+K DLV + +L E
Sbjct: 119 RYILDGIITLVDAAHAELHLTQTI-------AQAQVGFADRLLLSKTDLVEPAAVEALRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN+ A +++ ++G +D+ +L V G++L + ++ V+ + A
Sbjct: 172 RLARINSRAAIRVVEHGCIDLAELLDVRGFNL---NPDLGVNLKPMLRPVLKPATPDR-- 226
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+S++ + +E LD+D + ++ L+E G+ L R KG+L+++G E++ VF
Sbjct: 227 ----------ISTMVLRTEAPLDIDRLSSFMNELLETHGKQLLRYKGVLNIAGEERKLVF 276
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QGV W E R + +VFI L E +R GF+ A
Sbjct: 277 QGVLKLYGFDWDAEWAAGEARESVMVFIADELPEATIRAGFEAMAA 322
>gi|229592711|ref|YP_002874830.1| putative cobalamin synthesis-like protein [Pseudomonas fluorescens
SBW25]
gi|229364577|emb|CAY52463.1| putative cobalamin synthesis-related protein [Pseudomonas
fluorescens SBW25]
Length = 319
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 155/281 (55%), Gaps = 31/281 (11%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+E
Sbjct: 121 RYILDGIITLVDAAHAEHHLTQTI-------AQAQIGFADRLLVSKRDLVDDATFDALSE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ +G +D+ +L V G++L N+ + +A
Sbjct: 174 RLTRINRRAPIRVVDHGIIDLAELLDVRGFNL----------NAGMSLRPVSAAPSVDR- 222
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + +E LD+D + +++ L+E+ G+ L R KG+L+++G +++ VF
Sbjct: 223 ----------ISSLVLRTEEPLDIDRLSEFMNELLEDHGKQLLRYKGVLNIAGEDRRMVF 272
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W E R + +VFI L E +R+GF
Sbjct: 273 QGVLKLYGFDWDTEWAEGEARESVIVFIADELPEDKIREGF 313
>gi|395795225|ref|ZP_10474534.1| GTP-binding protein, YjiA family [Pseudomonas sp. Ag1]
gi|421142047|ref|ZP_15602023.1| putative repair protein [Pseudomonas fluorescens BBc6R8]
gi|395340588|gb|EJF72420.1| GTP-binding protein, YjiA family [Pseudomonas sp. Ag1]
gi|404506441|gb|EKA20435.1| putative repair protein [Pseudomonas fluorescens BBc6R8]
Length = 319
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 156/281 (55%), Gaps = 31/281 (11%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+E
Sbjct: 121 RYILDGIITLVDAAHAEHHLTQTI-------AQAQIGFADRLLVSKRDLVDDATFDALSE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L V G++L N+ + A
Sbjct: 174 RLTRINRRAPIRVVEHGKIDLAELLDVRGFNL----------NAGMSLRPVSQAPSIDR- 222
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + ++ LD+D++ +++ L+E+ G+ L R KG+L+++G +++ VF
Sbjct: 223 ----------ISSLVLRTDQPLDIDKLSEFMNELLEDHGKQLLRYKGVLNIAGEDRRMVF 272
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W E R + +VFI L E +R+GF
Sbjct: 273 QGVLKLYGFDWDTEWAEGEARESVIVFIADELPEEKIREGF 313
>gi|402698385|ref|ZP_10846364.1| cobalamin synthesis protein/P47K [Pseudomonas fragi A22]
Length = 320
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 154/281 (54%), Gaps = 27/281 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIYTDLTKALYLLLERLDSGEITFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL++ A Q+ +ADR++++K DLV + +L +
Sbjct: 121 RYLLDGIITLVDAAHAEVHLSQTI-------AQAQIGFADRLLVSKRDLVDDATFDALCQ 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L V G++L + + G +
Sbjct: 174 RLTRINRRAPIRVVEHGKIDLAELLDVRGFNL-----------------NADPGGGLNLR 216
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + +E LD+D + ++ L+EE G+ L R KG+L+++G +++ VF
Sbjct: 217 PVQPAASVDRISSMVLRTEKPLDIDSLSTFMNELLEEHGKQLLRYKGVLNIAGEDRRLVF 276
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W E R + +VFI L E +R+GF
Sbjct: 277 QGVLKLYGFDWDTEWAEGELRESVMVFIADELPEATIREGF 317
>gi|386013837|ref|YP_005932114.1| Cobalamin synthesis protein, P47K [Pseudomonas putida BIRD-1]
gi|313500543|gb|ADR61909.1| Cobalamin synthesis protein, P47K [Pseudomonas putida BIRD-1]
Length = 325
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 156/284 (54%), Gaps = 25/284 (8%)
Query: 4 NGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
NGC+CC++ GDL + L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 NGCVCCSIHGDLTRALYLLLERLDAGEIAFDRLVIECTGLADPAPVAQTFFIDEELRERY 122
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
LDG+ITLVD+ HA HL + A QV +ADR++L+K DLV + +L ER+
Sbjct: 123 ILDGIITLVDAAHAELHLTQTI-------AQAQVGFADRLLLSKTDLVEPAAVEALRERL 175
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN+ A +++ ++G +D+ +L V G++L + ++ V+ + A
Sbjct: 176 VRINSRAAIRVVEHGCIDLAELLDVRGFNL---NPDLGVNLKPMLRPVLKPATPDR---- 228
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
+S++ + +E LD+D + +++ L+E G+ L R KG+L+++G E++ VFQG
Sbjct: 229 --------ISTMVLRTEAPLDIDRLSNFMNELLETHGKQLLRYKGVLNIAGEERKLVFQG 280
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
V W E R + +VFI L E +R GF+ A
Sbjct: 281 VLKLYGFDWDAEWAAGEARESVMVFIADELPEATIRAGFEAMAA 324
>gi|408479099|ref|ZP_11185318.1| putative cobalamin synthesis-like protein [Pseudomonas sp. R81]
Length = 319
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 155/281 (55%), Gaps = 31/281 (11%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+E
Sbjct: 121 RYILDGIITLVDAAHAEHHLTQTI-------AQAQIGFADRLLVSKRDLVDDATFDALSE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ +G++D+ +L V G++L N+ +A
Sbjct: 174 RLTRINRRAPIRVVDHGNIDLAELLDVRGFNL----------NAGMTLRPVSAAPSIDR- 222
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + ++ LD+D + +++ L+E+ G+ L R KG+L+++G +++ VF
Sbjct: 223 ----------ISSLVLRTDQPLDIDRLSEFMNELLEDHGKQLLRYKGVLNIAGEDRRMVF 272
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W E R + +VFI L E +R+GF
Sbjct: 273 QGVLKLYGFDWDTEWAEGEARESVIVFIADELPEDKIREGF 313
>gi|398859588|ref|ZP_10615261.1| putative GTPase, G3E family [Pseudomonas sp. GM79]
gi|398236549|gb|EJN22327.1| putative GTPase, G3E family [Pseudomonas sp. GM79]
Length = 323
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 153/281 (54%), Gaps = 27/281 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV E +L+E
Sbjct: 121 RYILDGIITLVDAAHADLHLTQTI-------AQAQIGFADRLLVSKRDLVDEPTFTALSE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ +G +D+ +L V G++L + + G
Sbjct: 174 RLTRINRRAPIRVVDHGKIDLAELLDVRGFNL-----------------NADLGGGMSLR 216
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + ++ LD+D++ +++ L+E+ G+ L R KG+L++ G ++ VF
Sbjct: 217 PVSKAPSIDRISSLVLRTDKPLDIDKLSEFMNELLEDHGKQLLRYKGVLNILGEPRRMVF 276
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W DE R + +VFI L E +R+GF
Sbjct: 277 QGVLKLYGFDWDTEWADDEARESVIVFIADELPEEKIREGF 317
>gi|395647141|ref|ZP_10434991.1| putative cobalamin synthesis-like protein [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 319
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 154/281 (54%), Gaps = 31/281 (11%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L++
Sbjct: 121 RYILDGIITLVDAAHAEHHLTQTI-------AQAQIGFADRLLVSKRDLVDDASFEALSQ 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ +G++D+ +L V G++L S V +
Sbjct: 174 RLTRINRRAPIRVVDHGAIDLAELLDVRGFNLNASMSLRPVSATPSVDR----------- 222
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + +E LD+D + +++ L+E+ G+ L R KG+L+++G +++ VF
Sbjct: 223 ----------ISSLVLRTEQPLDIDRLSEFMNELLEDHGKQLLRYKGVLNIAGEDRRMVF 272
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W E R + +VFI L E +R+GF
Sbjct: 273 QGVLKLYGFDWDTEWAEGEVRESVIVFIADELPEDKIREGF 313
>gi|50120128|ref|YP_049295.1| GTP-binding protein YjiA [Pectobacterium atrosepticum SCRI1043]
gi|49610654|emb|CAG74099.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 328
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 156/287 (54%), Gaps = 31/287 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT +L LL L FDH++IE TG+A P PV +TF + E++ +
Sbjct: 69 LSNGCICCTKSNELADALLDLVDGVDNGTLDFDHVIIECTGMADPGPVAQTFFSHEVICE 128
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA Q LN+ F + ++ Q+ YADRI+L K D+ +E E +L
Sbjct: 129 RFVLDGIITLVDAAHAQQQLNQ----FTIAQS--QIGYADRILLTKTDVASEDE--TLLP 180
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDL-ERIDSEVHVDNSHCATHHHESAHGHHE 177
R++ INA AP+ +G++D+ + + G+ L +++D + V T ++
Sbjct: 181 RLQRINARAPIYPVVHGNIDLSVLFNIDGFVLSDKLDVKTPVFRFVAPTQNN-------- 232
Query: 178 GHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYV 237
V S+ + + ++L V D +E L+ + ++L R KGIL+++G +++ +
Sbjct: 233 -----------VQSIVVYLDDAVELQAVSDVMENLLLQFSDNLLRYKGILAINGDDRRLL 281
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
FQGV + W DE+R + LVFIG +L E +R F A
Sbjct: 282 FQGVQRLYSADWDREWHADEERKSVLVFIGVDLPEQEIRDAFARLTA 328
>gi|335774956|gb|AEH58412.1| COBW domain-containing protein 1-like protein, partial [Equus
caballus]
Length = 328
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 159/288 (55%), Gaps = 27/288 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 36 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGVDIY 94
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD II+NK DLV+E +L L I+
Sbjct: 95 LDGIITVVDSKYGLKHLAEEKPDGLINEASRQVALADIIIINKTDLVSEEDLNKLRTTIR 154
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + VD+ VL DL DS V + H +A H
Sbjct: 155 LINGLGKILETQRSRVDLSNVL-----DLHAFDSLSGV-SLQKKLQHLPTAQPH------ 202
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
D +V +VT G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 203 ---LDQSVVTVTFEVPGNAKEESLNVFIQNLLWEKNVRNKDDACMEVIRLKGLVSIKDRP 259
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV IGRNLDE L++ F
Sbjct: 260 QQVIVQGVHELYDLEETP-VSWRDDTERTNRLVLIGRNLDEDILKQLF 306
>gi|387895732|ref|YP_006326029.1| GTP-binding protein, YjiA family [Pseudomonas fluorescens A506]
gi|387164157|gb|AFJ59356.1| GTP-binding protein, YjiA family [Pseudomonas fluorescens A506]
Length = 318
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 156/282 (55%), Gaps = 31/282 (10%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L++
Sbjct: 121 RYILDGIITLVDAAHAEHHLTQTI-------AQAQIGFADRLLVSKRDLVDDASFDALSQ 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ +G +D+ +L V G++L N+ + +A
Sbjct: 174 RLTRINRRAPIRVVDHGKIDLAELLDVRGFNL----------NAGMSLRPVSAAPSVDR- 222
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + ++ LD+D + +++ L+E+ G+ L R KG+L+++G +++ VF
Sbjct: 223 ----------ISSLVLRTDQPLDIDRLSEFMNELLEDHGKQLLRYKGVLNIAGEDRRMVF 272
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W E R + +VFI L E +R+GF+
Sbjct: 273 QGVLKLYGFDWDTEWAEGEARESVIVFIADELPEDKIRQGFE 314
>gi|388466314|ref|ZP_10140524.1| GTP-binding protein, YjiA family [Pseudomonas synxantha BG33R]
gi|388009894|gb|EIK71081.1| GTP-binding protein, YjiA family [Pseudomonas synxantha BG33R]
Length = 319
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 155/282 (54%), Gaps = 31/282 (10%)
Query: 2 VNNGCLCCTVRGDLVK---MLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K +LL+ + FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDSSEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L++
Sbjct: 121 RYILDGIITLVDAAHAEHHLTQTI-------AQAQIGFADRLLVSKRDLVDDATFDALSQ 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ +G +D+ +L V G++L N+ + +A
Sbjct: 174 RLTRINRRAPIRVVDHGKIDLAELLDVRGFNL----------NAGMSLRPVSAAPSVDR- 222
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + ++ LD+D + +++ L+E+ G+ L R KG+L+++G +++ VF
Sbjct: 223 ----------ISSLVLRTDQPLDIDRLSEFMNELLEDHGKQLLRYKGVLNIAGEDRRMVF 272
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W E R + +VFI L E +R+GF+
Sbjct: 273 QGVLKLYGFDWDTEWAEGEARESVIVFIADELPEDKIREGFQ 314
>gi|207741925|ref|YP_002258317.1| cobalamin synthesis protein [Ralstonia solanacearum IPO1609]
gi|206593311|emb|CAQ60238.1| probable cobalamin synthesis protein [Ralstonia solanacearum
IPO1609]
Length = 528
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 162/307 (52%), Gaps = 34/307 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKK---QGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL+ L L ++ + QFD +VIETTG A P PV +TF D+ ++
Sbjct: 232 MSNGCICCTIRGDLLTALSDLVSRRDKGELQFDRVVIETTGAANPGPVAQTFFMDDEIAG 291
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD V+TLVD+KH Q L++ + EA QV +AD I + K DLV+ ++ +L
Sbjct: 292 RYLLDAVVTLVDAKHGNQQLDKQE------EAQRQVGFADAIFITKGDLVSSADVDALRH 345
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVD------------------ 160
R+ H+N AP++ A +G +D + + G++L ++++ +D
Sbjct: 346 RLLHMNPRAPIRTASFGDTPIDTIFDLRGFNL---NAKLEIDPDFLREDDHDHGHDHDHD 402
Query: 161 ---NSHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG 217
+ C H H HH + H ++S SE + +++++L ++ G
Sbjct: 403 HACSPGCDHDHDHDHGHGHHHHHGHAHHTDRIASFVFRSERPFNYTKLEEFLSGVLNVYG 462
Query: 218 EDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRK 277
E L R KG+L + G +++ VFQGVH + G W E N++VFIG +L + K
Sbjct: 463 EKLLRYKGVLYMEGVDRKVVFQGVHQLMGSDVGGKWD-SETPGNRMVFIGVDLPRDTILK 521
Query: 278 GFKGCLA 284
G + CLA
Sbjct: 522 GLENCLA 528
>gi|149736825|ref|XP_001490077.1| PREDICTED: COBW domain-containing protein 2 isoform 1 [Equus
caballus]
Length = 395
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 159/288 (55%), Gaps = 27/288 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGVDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD II+NK DLV+E +L L I+
Sbjct: 162 LDGIITVVDSKYGLKHLAEEKPDGLINEASRQVALADIIIINKTDLVSEEDLNKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + VD+ VL DL DS V + H +A H
Sbjct: 222 LINGLGKILETQRSRVDLSNVL-----DLHAFDSLSGV-SLQKKLQHLPTAQPH------ 269
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
D +V +VT G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 270 ---LDQSVVTVTFEVPGNAKEESLNVFIQNLLWEKNVRNKDDACMEVIRLKGLVSIKDRP 326
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV IGRNLDE L++ F
Sbjct: 327 QQVIVQGVHELYDLEETP-VSWRDDTERTNRLVLIGRNLDEDILKQLF 373
>gi|312963152|ref|ZP_07777637.1| cobalamin synthesis protein/P47K [Pseudomonas fluorescens WH6]
gi|311282663|gb|EFQ61259.1| cobalamin synthesis protein/P47K [Pseudomonas fluorescens WH6]
Length = 319
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 155/281 (55%), Gaps = 31/281 (11%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L++
Sbjct: 121 RYILDGIITLVDAAHAEHHLTQTI-------AQAQIGFADRLLVSKRDLVDDATFEALSD 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L V G++L N+ + A
Sbjct: 174 RLTRINRRAPIRVVEHGKIDLAELLDVRGFNL----------NAGMSLRPVSQAPSIDR- 222
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + +E LD+D + +++ L+E+ G+ L R KG+L+++G +++ VF
Sbjct: 223 ----------ISSLVLRTEQPLDIDRLSEFMNELLEDHGKQLLRYKGVLNIAGEDRRMVF 272
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W E R + +VFI L E +R+GF
Sbjct: 273 QGVLKLYGFDWDTEWAEGETRESVIVFIADELPEDKIREGF 313
>gi|350579285|ref|XP_001924427.4| PREDICTED: COBW domain-containing protein 2 isoform 1 [Sus scrofa]
Length = 396
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 158/288 (54%), Gaps = 27/288 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 104 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAALGVDIY 162
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD II+NK DLV+E +L L I+
Sbjct: 163 LDGIITVVDSKYGLKHLAEEKPDGLINEASRQVALADIIIINKTDLVSEEDLNKLRTTIR 222
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + VD+ VL DL DS + + H + H
Sbjct: 223 SINGLGKILETQRSRVDLSNVL-----DLHAFDSLSGI-SLQKKLQHMSTTQPH------ 270
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
D ++ +VT G + ++ +++ LI EK ++ R+KG++S+
Sbjct: 271 ---ADQSIVTVTFEVPGNAKEESLNVYIQNLIWEKNVSNRDGNCMEVIRLKGLISIRDKP 327
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+L+ IGRNLD+ L++ F
Sbjct: 328 QQVIVQGVHELYDLEETP-VSWKDDTERTNRLILIGRNLDKDILKQLF 374
>gi|170719986|ref|YP_001747674.1| cobalamin synthesis protein P47K [Pseudomonas putida W619]
gi|169757989|gb|ACA71305.1| cobalamin synthesis protein P47K [Pseudomonas putida W619]
Length = 325
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 152/284 (53%), Gaps = 25/284 (8%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
NGC+CC++ GDL + L L ++ FD +VIE TGLA PAPV +TF +E +
Sbjct: 63 NGCVCCSIHGDLTRALFLLLERLDAGEIAFDRLVIECTGLADPAPVAQTFFVEEELRDRY 122
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
LDG+ITLVD+ HA HL + A QV +ADR++L+K DLV T + +L ER+
Sbjct: 123 ILDGIITLVDAAHAELHLAQTI-------AQAQVGFADRLLLSKTDLVEPTAVDALRERL 175
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN A +++ ++G +D+ +L V G++L N + + ++
Sbjct: 176 ARINGRAALRVVEHGRIDLAELLDVRGFNL----------NPDLGANLKPTLRPVYKPAT 225
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
+ +S++ + +E LD+D + D++ L+E G+ L R KG+L+++G +++ VFQG
Sbjct: 226 PDR-----ISTLVLRTEVPLDIDRLSDFMNDLLETHGKQLLRYKGVLNIAGEDRRLVFQG 280
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
V W E R + +VFI L E +R GF+ A
Sbjct: 281 VLKLYGFDWDAEWAEGETRESVMVFIADELPEAKIRAGFEALAA 324
>gi|409427597|ref|ZP_11262095.1| cobalamin synthesis protein/P47K [Pseudomonas sp. HYS]
Length = 322
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 154/283 (54%), Gaps = 27/283 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC++ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LANGCVCCSIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV +L+E
Sbjct: 121 RYLLDGIITLVDAAHAELHLTQTI-------AQAQIGFADRLLVSKTDLVDGASFQALSE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L V G++L + + G
Sbjct: 174 RLGRINRRAPIRVVEHGKIDLAELLDVRGFNL-----------------NADLGGGLSLR 216
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + ++ LD+D + D++ +L+EE G+ L R KG+L+++ E++ VF
Sbjct: 217 PVVQTATPDRISSLVLRTDTPLDIDRLSDFMNQLLEEHGKQLLRYKGVLNIAAEERRLVF 276
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV W E R + +VFI +L E +R+GF+
Sbjct: 277 QGVLKLYGFDWDTEWAEGEVRESVMVFIADDLPEAKIREGFEA 319
>gi|429332611|ref|ZP_19213326.1| cobalamin synthesis protein/P47K [Pseudomonas putida CSV86]
gi|428762706|gb|EKX84906.1| cobalamin synthesis protein/P47K [Pseudomonas putida CSV86]
Length = 322
Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 148/281 (52%), Gaps = 27/281 (9%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
NGC+CC++ DL K L L ++ FD +VIE TGLA PAPV +TF DE +
Sbjct: 63 NGCVCCSIHTDLTKALFLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRDRY 122
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
LDG+ITLVD+ HA HL + A QV +ADR++L+K DLV + + +LT R+
Sbjct: 123 ILDGIITLVDAAHADLHLTQAI-------AQAQVGFADRLLLSKTDLVDDATVEALTARL 175
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN APV++ +G +D+ +L V G++L + + G
Sbjct: 176 GRINRRAPVRVVDHGQIDLAELLDVRGFNL-----------------NADLGGGMSLRPV 218
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
+SS+ + +E LD+D + +++ L+EE G+ L R KG+L+++G +++ VFQG
Sbjct: 219 LATTTPDRISSLVLRTETPLDIDRLSEFMNELLEEHGKQLLRYKGVLNIAGEDRRLVFQG 278
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
V W E R + +VFI L E +R GF+
Sbjct: 279 VLKLYGFDWDTEWAEGETRESVMVFIADQLPEEKIRAGFEA 319
>gi|403057562|ref|YP_006645779.1| GTP-binding protein YjiA [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402804888|gb|AFR02526.1| putative GTP-binding protein YjiA [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 316
Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 154/282 (54%), Gaps = 31/282 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT +L LL L FDH++IE TG+A P PV +TF + +++ +
Sbjct: 57 LSNGCICCTQSNELADALLDLVDGVDNGTLDFDHVIIECTGMADPGPVAQTFFSHDVICE 116
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA Q L++ F + ++ Q+ YADRI+L K D+ E E +L
Sbjct: 117 RFVLDGIITLVDAVHAQQQLDQ----FTIAQS--QIGYADRILLTKTDVAAEDE--TLLP 168
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDL-ERIDSEVHVDNSHCATHHHESAHGHHE 177
R++ INA AP+ +G +D+ + + G+ L +++D + V T ++
Sbjct: 169 RLQRINARAPIYSVVHGDIDLSVLFNIDGFVLSDKLDVKTPVFRFVAPTQNN-------- 220
Query: 178 GHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYV 237
V S+ + + ++L V D +E L+ + ++L R KGIL+++G +++ +
Sbjct: 221 -----------VQSIVVYLDKAVELQSVSDVMENLLLQFSDNLLRYKGILAINGDDRRLL 269
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
FQGV + W PDE+R + LVFIG +L E +R F
Sbjct: 270 FQGVQRLYSADWDREWQPDEERKSVLVFIGVDLPEQEIRDAF 311
>gi|83748658|ref|ZP_00945676.1| Low-affinity zinc transport protein [Ralstonia solanacearum UW551]
gi|83724702|gb|EAP71862.1| Low-affinity zinc transport protein [Ralstonia solanacearum UW551]
Length = 358
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 162/307 (52%), Gaps = 34/307 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKK---QGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL+ L L ++ + QFD +VIETTG A P PV +TF D+ ++
Sbjct: 62 MSNGCICCTIRGDLLTALSDLVSRRDKGELQFDRVVIETTGAANPGPVAQTFFMDDEIAG 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD V+TLVD+KH Q L++ + EA QV +AD I + K DLV+ ++ +L
Sbjct: 122 RYLLDAVVTLVDAKHGNQQLDKQE------EAQRQVGFADAIFITKGDLVSSADVDALRH 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVD------------------ 160
R+ H+N AP++ A +G +D + + G++L ++++ +D
Sbjct: 176 RLLHMNPRAPIRTASFGDTPIDTIFDLRGFNL---NAKLEIDPDFLREDDHDHGHDHDHD 232
Query: 161 ---NSHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG 217
+ C H H HH + H ++S SE + +++++L ++ G
Sbjct: 233 HACSPGCDHDHDHDHGHGHHHHHGHAHHTDRIASFVFRSERPFNYTKLEEFLSGVLNVYG 292
Query: 218 EDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRK 277
E L R KG+L + G +++ VFQGVH + G W E N++VFIG +L + K
Sbjct: 293 EKLLRYKGVLYMEGVDRKVVFQGVHQLMGSDVGGKWD-SETPGNRMVFIGVDLPRDTILK 351
Query: 278 GFKGCLA 284
G + CLA
Sbjct: 352 GLENCLA 358
>gi|241664956|ref|YP_002983316.1| cobalamin synthesis protein P47K [Ralstonia pickettii 12D]
gi|240866983|gb|ACS64644.1| cobalamin synthesis protein P47K [Ralstonia pickettii 12D]
Length = 359
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 168/308 (54%), Gaps = 35/308 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKK---QGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDLVK L L ++ Q QFD +VIETTG+A P PV +TF D+ ++
Sbjct: 62 MSNGCICCTIRGDLVKGLSDLLTRRDNGQIQFDRVVIETTGVANPGPVAQTFFMDDEIAS 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD VITLVD+KH L++ + EA QV +AD I + K DLV+ ++ +L
Sbjct: 122 RYLLDAVITLVDAKHGNMQLDKQE------EAQRQVGFADAIFITKSDLVSADDVDALRH 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVD------------------ 160
R+ H+N AP++ A +G +D + + G++L ++++ +D
Sbjct: 176 RLLHMNPRAPIRTANFGDAPIDTIFDLRGFNL---NAKLEIDPDFLREDGHDHNHDHDHD 232
Query: 161 ---NSHCATHHHESAHGHHEGHHHNHMHDS-AVSSVTIVSEGTLDLDEVDDWLERLIEEK 216
++ C H HGH HHH H H + ++S SE + +++++L ++
Sbjct: 233 HACSADCDHDHDHEHHGHGHHHHHGHAHHTDRIASFVFRSERPFNYTKLEEFLSGVLNIY 292
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
GE L R KG+L + G +++ VFQGVH + G W E N++VFIG +L +
Sbjct: 293 GEKLLRYKGVLYMEGVDRKVVFQGVHQLMGSDVGGKWD-GETPSNRMVFIGVDLPRETIL 351
Query: 277 KGFKGCLA 284
KG + CLA
Sbjct: 352 KGLENCLA 359
>gi|395499106|ref|ZP_10430685.1| putative cobalamin synthesis-like protein [Pseudomonas sp. PAMC
25886]
Length = 319
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 155/281 (55%), Gaps = 31/281 (11%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV +L+E
Sbjct: 121 RYILDGIITLVDAAHAEHHLTQTI-------AQAQIGFADRLLVSKRDLVDNATFDALSE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L V G++L N+ + A
Sbjct: 174 RLTRINRRAPIRVVEHGKIDLAELLDVRGFNL----------NAGMSLRPVSQAPSIDR- 222
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + ++ LD+D++ +++ L+E+ G+ L R KG+L+++G +++ VF
Sbjct: 223 ----------ISSLVLRTDQPLDIDKLSEFMNELLEDHGKQLLRYKGVLNIAGEDRRMVF 272
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W E R + +VFI L E +R+GF
Sbjct: 273 QGVLKLYGFDWDTEWAEGELRESVIVFIADELPEEKIREGF 313
>gi|134095845|ref|YP_001100920.1| CobW protein involved in cobalamin synthesis [Herminiimonas
arsenicoxydans]
gi|133739748|emb|CAL62799.1| Putative cobalamin synthesis CobW [Herminiimonas arsenicoxydans]
Length = 382
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 160/311 (51%), Gaps = 39/311 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG------QFDHIVIETTGLAKPAPVIETFCTDEL 55
++NGC+CC + DL++ L +L ++ G +FD I+IETTGLA P P+ + F TD
Sbjct: 70 MSNGCICCASKDDLMESLYKLYMRRAGLIEPKIEFDRILIETTGLADPTPLAQAFYTDMS 129
Query: 56 VSQYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGS 115
+S +LD +IT+VD KH + E EA Q+A AD+II NK DLV++ E +
Sbjct: 130 LSLTYRLDAIITMVDIKHVVMQTGETM------EAQRQLAMADKIIFNKRDLVSDAEYAN 183
Query: 116 LTERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEV------HVD--------- 160
+ +N M+P + YG +D ++ + +D ++ + HV+
Sbjct: 184 AIAVVNALNPMSPKETTSYGKLDASRLIDLNLFDPNVKETAIADWIGLHVEAPQVEHHHD 243
Query: 161 -------NSHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLI 213
+ H H+ AHGH +H H +SSV++ + LD +V +L+RLI
Sbjct: 244 HHHADGKDCHVCNAGHDHAHGHV-----SHKHLDGISSVSMRQQYPLDYQKVMQFLDRLI 298
Query: 214 EEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDET 273
+ G +LYR+KG++ G Q + QGV + P+ K +LV IG+++D+
Sbjct: 299 TQHGNNLYRVKGLMQFRGISQPVILQGVQTVFSPLTYAEKWPEGKMETRLVIIGKHIDKH 358
Query: 274 ALRKGFKGCLA 284
+++ F C+A
Sbjct: 359 QMQEEFAQCVA 369
>gi|430805702|ref|ZP_19432817.1| cobalamin synthesis protein [Cupriavidus sp. HMR-1]
gi|429502038|gb|ELA00360.1| cobalamin synthesis protein [Cupriavidus sp. HMR-1]
Length = 363
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 168/309 (54%), Gaps = 33/309 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKK-QGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDLV+ L L ++ +G+ FD +VIETTG+A P PV +TF DE ++
Sbjct: 62 MSNGCICCTIRGDLVQALSDLVTQRDEGKIAFDRVVIETTGVANPGPVAQTFFMDEEIAS 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD VITLVD+KHA L++ + EA QV +AD I + K DLV E E+ L
Sbjct: 122 RYLLDAVITLVDAKHANLQLDKQE------EAQRQVGFADAIFITKADLVGEAEVADLRH 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDL-ERIDSEVHVDNSHCATHHHESAHGHHE 177
R+ H+N AP+ A +G +D + + G++L E+++ + + H H+ HG H
Sbjct: 176 RLLHMNPRAPINAAHFGEAPIDLIFDLRGFNLNEKLEIDPDFLRADEHEHDHDHEHGEHC 235
Query: 178 G----------------------HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEE 215
G HHH+H H ++S S+ +++++L ++
Sbjct: 236 GADCGHDHGHEHGHDHGHGHAHDHHHHHHHTDRIASFVFRSDKPFHYGKLEEFLSGILSV 295
Query: 216 KGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETAL 275
GE L R KG+L + G +++ VFQGVH + G W DE+ K+VFIG +L A+
Sbjct: 296 YGEKLLRYKGVLYMEGVDRKVVFQGVHQLMGSDIGAKW-EDEQPCTKMVFIGVDLPRDAI 354
Query: 276 RKGFKGCLA 284
KG CLA
Sbjct: 355 LKGLTACLA 363
>gi|196230857|ref|ZP_03129718.1| cobalamin synthesis protein P47K [Chthoniobacter flavus Ellin428]
gi|196225198|gb|EDY19707.1| cobalamin synthesis protein P47K [Chthoniobacter flavus Ellin428]
Length = 315
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 158/287 (55%), Gaps = 35/287 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
++NGCLCCTVR DLVK + L KK G FD+++IETTG+A P PV +TF + Q+V+
Sbjct: 60 LSNGCLCCTVRKDLVKGVQNLVKK--GGFDYLLIETTGIADPGPVAQTFLNIPALQQFVR 117
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
+D +IT+VDS+ + + E + A EQVA AD ++LNK DLV+ L L +++
Sbjct: 118 MDSIITVVDSEQIEKQMKETET------AREQVAMADFLLLNKTDLVSAEHLAKLEAKVR 171
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVD----NSHCATHHHESAHGHHE 177
+N A + ++ +L + + ++D ++ VD N A HHH+
Sbjct: 172 ELNPHATIFHTNQSQANLKEILDMNAF---KLDHKLSVDPEFLNELNARHHHD------- 221
Query: 178 GHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYV 237
+ S + + ++++ + ++++L E E +YR KG +S++G+ ++ +
Sbjct: 222 -----------IQSFSFEFDKPFNVEKFEFFVQKLSE--NEKVYRSKGFISIAGNPRRAI 268
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
F GV++ + W DE R ++LVFIG+ LD+ +R + CLA
Sbjct: 269 FHGVNNRFTIMWDRLWEKDETRASQLVFIGKQLDDKKIRAELEKCLA 315
>gi|423693668|ref|ZP_17668188.1| GTP-binding protein, YjiA family [Pseudomonas fluorescens SS101]
gi|387999351|gb|EIK60680.1| GTP-binding protein, YjiA family [Pseudomonas fluorescens SS101]
Length = 318
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 156/282 (55%), Gaps = 31/282 (10%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L++
Sbjct: 121 RYILDGIITLVDAAHAEHHLTQTI-------AQAQIGFADRLLVSKRDLVDDAAFEALSQ 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ +G +D+ +L V G++L N+ + +A
Sbjct: 174 RLTRINRRAPIRVVDHGKIDLAELLDVRGFNL----------NAGMSLRPVNAAPSVDR- 222
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + ++ LD+D + +++ L+E+ G+ L R KG+L+++G +++ VF
Sbjct: 223 ----------ISSLVLRTDQPLDIDRLSEFMNELLEDHGKQLLRYKGVLNIAGEDRRMVF 272
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W E R + +VFI L E +R+GF+
Sbjct: 273 QGVLKLYGFDWDTEWAEGEVRESVIVFIADELPEDKIRQGFE 314
>gi|167035624|ref|YP_001670855.1| cobalamin synthesis protein P47K [Pseudomonas putida GB-1]
gi|166862112|gb|ABZ00520.1| cobalamin synthesis protein P47K [Pseudomonas putida GB-1]
Length = 325
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 153/286 (53%), Gaps = 25/286 (8%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC++ GDL + L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LANGCVCCSIHGDLTRALYLLLERLDAGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A QV +ADR++L+K DLV + +L E
Sbjct: 121 RYILDGIITLVDAAHAELHLTQTI-------AQAQVGFADRLLLSKTDLVEPAAVDALRE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN A +++ ++G +D+ +L V G++L N + + +
Sbjct: 174 RLARINGRAAIRVVEHGCIDLAELLDVRGFNL----------NPDLGANLKLTLRPVLKP 223
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+ +S++ + ++ LD+D + ++ L+E G L R KG+L+++G E++ VF
Sbjct: 224 ATPDR-----ISTMVLRTDTALDIDRLSGFMNELLETHGTQLLRYKGVLNIAGEERKLVF 278
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QGV WG E R + +VFI L E +R GF+ A
Sbjct: 279 QGVLKLYGFDWDAEWGAGETRESVMVFIADELPEATIRAGFEALAA 324
>gi|187930766|ref|YP_001901253.1| cobalamin synthesis protein P47K [Ralstonia pickettii 12J]
gi|187727656|gb|ACD28821.1| cobalamin synthesis protein P47K [Ralstonia pickettii 12J]
Length = 362
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 161/311 (51%), Gaps = 38/311 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKK---QGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDLVK L L ++ Q QFD +VIETTG+A P PV +TF D+ ++
Sbjct: 62 MSNGCICCTIRGDLVKGLSDLLTRRDNDQIQFDRVVIETTGVANPGPVAQTFFMDDEIAS 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD VITLVD+KH L++ + EA QV +AD I + K DLV+ ++ +L
Sbjct: 122 RYLLDAVITLVDAKHGNMQLDKQE------EAQRQVGFADAIFITKSDLVSAADVDALRH 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSH--------------- 163
R+ H+N AP++ A +G +D + + G++L ++++ +D
Sbjct: 176 RLLHMNPRAPIRTANFGETPIDTIFDLRGFNL---NAKLEIDPDFLREDDHDHNHDHDHD 232
Query: 164 --CATHHHESAHGHHEGHHHNHMHDSA--------VSSVTIVSEGTLDLDEVDDWLERLI 213
C+ H+ H H ++S SE + +++++L ++
Sbjct: 233 HACSADCDRDHDHEHDHGHAPGHHHHHGHAHHTDRIASFVFRSERPFNYTKLEEFLSGVL 292
Query: 214 EEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDET 273
GE L R KG+L + G +++ VFQGVH + G W E N++VFIG +L
Sbjct: 293 NIYGEKLLRYKGVLYMEGVDRKVVFQGVHQLMGSDVGGKWD-GETPSNRMVFIGVDLPRE 351
Query: 274 ALRKGFKGCLA 284
+ KG + CLA
Sbjct: 352 TILKGLENCLA 362
>gi|426220366|ref|XP_004004387.1| PREDICTED: COBW domain-containing protein 2 isoform 1 [Ovis aries]
Length = 398
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 158/288 (54%), Gaps = 27/288 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L KKK G+FD+I++ETTGLA P V F D + +
Sbjct: 106 LRNGCLCCSVKDNGLRAIENLMKKK-GKFDYILLETTGLADPGAVASMFWVDAELGVDIY 164
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD IILNK DLV+E +L L I+
Sbjct: 165 LDGIITVVDSKYGLKHLAEEKPDGLINEASRQVALADIIILNKTDLVSEEDLNKLRTTIR 224
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + VD+ VL DL DS + + H + H
Sbjct: 225 SINGLGKILETQRSRVDLAKVL-----DLHAFDSLSGI-SLQKKLQHVPTTQPH------ 272
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
D ++ +VT G + + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 273 ---LDQSIITVTFEVPGNAEEESLNVYIQNLLWEKNVRNRDDDCMEVIRLKGLVSIKDKP 329
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P W D +R N+LV IGRNLD+ L++ F
Sbjct: 330 QQVIVQGVHELYDLEETPVN-WEDDSERTNRLVLIGRNLDKDILKQLF 376
>gi|410092167|ref|ZP_11288702.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
viridiflava UASWS0038]
gi|409760491|gb|EKN45634.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
viridiflava UASWS0038]
Length = 325
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 157/286 (54%), Gaps = 26/286 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+
Sbjct: 123 RYILDGIITLVDAAHADTHLTQTI-------AQAQIGFADRLLVSKRDLVDDAAFDALSA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L V G++L + D + G+
Sbjct: 176 RLTRINRRAPIRIVEHGKIDLAELLDVRGFNL-------NADLGGGMVLRPLAPVGNSGD 228
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
++S+ + S+ LDLD + +++ L+E+ G+ L R KG+L+++G +++ VF
Sbjct: 229 R---------ITSLVLRSDKPLDLDRLSEFMNALLEDHGKQLLRYKGVLNIAGEDRRMVF 279
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QGV W E R + +VFI L E +R GF+ ++
Sbjct: 280 QGVLKLYGFDWDTEWAEGEPRESVIVFIADELPEEKIRAGFEAMVS 325
>gi|440739617|ref|ZP_20919126.1| putative cobalamin synthesis-like protein [Pseudomonas fluorescens
BRIP34879]
gi|440379200|gb|ELQ15800.1| putative cobalamin synthesis-like protein [Pseudomonas fluorescens
BRIP34879]
Length = 319
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 153/281 (54%), Gaps = 31/281 (11%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEDLRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+E
Sbjct: 121 RYILDGIITLVDAAHAEHHLTQTI-------AQAQIGFADRLLVSKRDLVDDATFDALSE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ +G +D+ +L V G++L N+ + A
Sbjct: 174 RLTRINRRAPIRVVDHGKIDLAELLDVRGFNL----------NAGMSLRPVSKAPSIDR- 222
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + ++ LD+D + +++ L+E+ G+ L R KG+L+++G +++ VF
Sbjct: 223 ----------ISSLVLRTDQPLDIDRLSEFMNELLEDHGKQLLRYKGVLNIAGEDRRMVF 272
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W E R + +VFI L E +R GF
Sbjct: 273 QGVLKLYGFDWDTEWAEGEVRESVIVFIADELPEQKIRDGF 313
>gi|399000944|ref|ZP_10703664.1| putative GTPase, G3E family [Pseudomonas sp. GM18]
gi|398128699|gb|EJM18081.1| putative GTPase, G3E family [Pseudomonas sp. GM18]
Length = 355
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 152/281 (54%), Gaps = 27/281 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 93 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 152
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV E +L+E
Sbjct: 153 RYILDGIITLVDAAHADLHLTQ-------TIAQAQIGFADRLLVSKRDLVDEPTFTALSE 205
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ +G +D+ +L V G++L + + G
Sbjct: 206 RLTRINRRAPIRVVDHGKIDLAELLDVRGFNL-----------------NADLGGGVSLR 248
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + + LD+D++ +++ L+EE G+ L R KG+L++ G ++ VF
Sbjct: 249 PVSKAPSIDRISSLVLRTGKPLDIDKLSEFMNELLEEHGKQLLRYKGVLNILGEPRRMVF 308
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W D+ R + +VFI L E +R+GF
Sbjct: 309 QGVLKLYGFDWDTEWADDDTRESVIVFIADELPEEKIREGF 349
>gi|339489352|ref|YP_004703880.1| cobalamin synthesis protein P47K [Pseudomonas putida S16]
gi|338840195|gb|AEJ15000.1| cobalamin synthesis protein P47K [Pseudomonas putida S16]
Length = 328
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 153/286 (53%), Gaps = 25/286 (8%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC++ GDL + L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 64 LANGCVCCSIHGDLTRALYLLLERLDAGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 123
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A QV +ADR++L+K +LV + +L E
Sbjct: 124 CYILDGIITLVDAAHAELHLTQTI-------AQAQVGFADRLLLSKTELVEPAAVEALRE 176
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN A +++ ++G +D+ +L V G++L N + + +
Sbjct: 177 RLARINGRAAIRVVEHGRIDLAELLDVRGFNL----------NPDLGANLKPALRPLLKP 226
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+ +S++ + +E LD+D + D++ L+E G+ L R KG+L+++G ++ VF
Sbjct: 227 ATPDR-----ISTLVLRTESALDIDRLSDFMNELLETHGKQLLRYKGVLNIAGEARKLVF 281
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QGV W E R + +VFI L E +R GF+ A
Sbjct: 282 QGVLKLYGFDWDAEWAEGETRESVMVFIADELPEATIRAGFEALAA 327
>gi|339324342|ref|YP_004684035.1| GTPase G3E family [Cupriavidus necator N-1]
gi|338164499|gb|AEI75554.1| GTPase G3E family [Cupriavidus necator N-1]
Length = 361
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 164/307 (53%), Gaps = 31/307 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDLV+ L L ++ FD +VIETTG+A P PV +TF DE ++
Sbjct: 62 MSNGCICCTIRGDLVQALSTLLTRRDAGEIGFDRVVIETTGVANPGPVAQTFFMDEEIAS 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD VITLVD+KHA L++ + EA QV +AD I + K DLVTE ++ L
Sbjct: 122 RYLLDAVITLVDAKHAHLQLDKQE------EAQRQVGFADAIFITKSDLVTEADVAELRH 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEVHV---------------- 159
R+ H+N AP++L +G +D + + G++L ID E
Sbjct: 176 RLLHMNPRAPIRLVNFGEAPIDTIFDLRGFNLNAKLEIDPEFLRADDHDHDHDHEHGEHC 235
Query: 160 --DNSHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG 217
D H H H HGH HHH+H H ++S S+ +++++L ++ G
Sbjct: 236 GDDCGHDHGHDHAHGHGHAHDHHHHHHHTDRIASFVFRSDKPFHYGKLEEFLSGILAVYG 295
Query: 218 EDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRK 277
E L R KG+L + G +++ VFQGVH + G W +E ++VFIG +L A+ K
Sbjct: 296 EKLLRYKGVLYMDGVDRKVVFQGVHQLMGSDIGAKW-EEETPGTRMVFIGVDLPRDAILK 354
Query: 278 GFKGCLA 284
G + CLA
Sbjct: 355 GLENCLA 361
>gi|309780238|ref|ZP_07674989.1| CobW/P47K family protein [Ralstonia sp. 5_7_47FAA]
gi|404394838|ref|ZP_10986641.1| hypothetical protein HMPREF0989_03052 [Ralstonia sp. 5_2_56FAA]
gi|308920941|gb|EFP66587.1| CobW/P47K family protein [Ralstonia sp. 5_7_47FAA]
gi|348613902|gb|EGY63471.1| hypothetical protein HMPREF0989_03052 [Ralstonia sp. 5_2_56FAA]
Length = 362
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 161/311 (51%), Gaps = 38/311 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKK---QGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDLVK L L ++ Q QFD +VIETTG+A P PV +TF D+ ++
Sbjct: 62 MSNGCICCTIRGDLVKGLSDLLTRRDNDQIQFDRVVIETTGVANPGPVAQTFFMDDEIAS 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD VITLVD+KH L++ + EA QV +AD I + K DLV+ ++ +L
Sbjct: 122 RYLLDAVITLVDAKHGNMQLDKQE------EAQRQVGFADAIFITKSDLVSAADVDALRH 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSH--------------- 163
R+ H+N AP++ A +G +D + + G++L ++++ +D
Sbjct: 176 RLLHMNPRAPIRTANFGETPIDTIFDLRGFNL---NAKLEIDPDFLREDDHDHNHDHDHD 232
Query: 164 --CATHHHESAHGHHEGHHHNHMHDSA--------VSSVTIVSEGTLDLDEVDDWLERLI 213
C+ H+ H H ++S SE + +++++L ++
Sbjct: 233 HACSADCDRDHDHEHDHGHAPGHHHHHGHAHHTDRIASFVFRSERPFNYTKLEEFLSGVL 292
Query: 214 EEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDET 273
GE L R KG+L + G +++ VFQGVH + G W E N++VFIG +L
Sbjct: 293 NIYGEKLLRYKGVLYMEGVDRKVVFQGVHQLMGSDVGGKWD-GETPSNRMVFIGVDLPRE 351
Query: 274 ALRKGFKGCLA 284
+ KG + CLA
Sbjct: 352 TILKGLENCLA 362
>gi|325272871|ref|ZP_08139205.1| cobalamin synthesis protein P47K [Pseudomonas sp. TJI-51]
gi|324101997|gb|EGB99509.1| cobalamin synthesis protein P47K [Pseudomonas sp. TJI-51]
Length = 325
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 153/283 (54%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC++ GDL + L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LANGCVCCSIHGDLTRALYLLLERLDAGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+KHA HL + A QV +ADR++L+K DLV + +L E
Sbjct: 121 RYILDGIITLVDAKHAELHLTQTI-------AQAQVGFADRLLLSKTDLVEPAAVQALRE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN A +++ ++G +D+ +L V G++L N + S +
Sbjct: 174 RLARINGRAAIRVVEHGCIDLAELLDVRGFNL----------NPDLGANLKPSLRPVLKP 223
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+ + ++ + +E LD+D + ++ L+E G+ L R KG+L+++G +++ VF
Sbjct: 224 ATPDR-----IGTLVLRTEAALDIDRLSGFMNELLETHGKQLLRYKGVLNIAGEDRKLVF 278
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV W E R + +VFI +L E +R GF+
Sbjct: 279 QGVLKLYGFDWDAEWVEGETRESVMVFIADDLPEATIRAGFEA 321
>gi|398878038|ref|ZP_10633171.1| putative GTPase, G3E family [Pseudomonas sp. GM67]
gi|398883962|ref|ZP_10638909.1| putative GTPase, G3E family [Pseudomonas sp. GM60]
gi|398195788|gb|EJM82817.1| putative GTPase, G3E family [Pseudomonas sp. GM60]
gi|398201126|gb|EJM88014.1| putative GTPase, G3E family [Pseudomonas sp. GM67]
Length = 323
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 152/281 (54%), Gaps = 27/281 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV E +L+E
Sbjct: 121 RYILDGIITLVDAAHADVHLTQTI-------AQAQIGFADRLLVSKRDLVDEPTFTALSE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ +G +D+ +L V G++L + + G
Sbjct: 174 RLTRINRRAPIRVVDHGQIDLAELLDVRGFNL-----------------NADLGGGVSLR 216
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + ++ LD+D++ +++ L+EE G+ L R KG+L++ G ++ VF
Sbjct: 217 PVSKAPSIDRISSLVLRTDKPLDIDKLSEFMNELLEEHGKQLLRYKGVLNILGEPRRMVF 276
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W E R + +VFI L E +R+GF
Sbjct: 277 QGVLKLYGFDWDTEWAEGEARESVIVFIADELPEEKIREGF 317
>gi|432100313|gb|ELK29077.1| COBW domain-containing protein 3 [Myotis davidii]
Length = 395
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 160/288 (55%), Gaps = 27/288 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D+ + +
Sbjct: 103 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWIDDELGVDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV+E +L L I+
Sbjct: 162 LDGIITVVDSKYGLKHLTEEKPDGLINEASRQVALADIILINKTDLVSEEDLNKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + VD+ VL DL DS + + H + H
Sbjct: 222 SINGLGKILETQRSRVDLSNVL-----DLHAFDSLSGI-SLQKKLQHLPTIQPH------ 269
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
D ++ +VT G + ++++++ L+ EK ++ R+KG++S+
Sbjct: 270 ---LDQSIITVTFEVPGNAKEESLNEFIQNLLWEKNVRNKDDECMEVIRLKGLVSIKDKP 326
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGV+ L+ P W D +R N+LVFIGRNLD+ L++ F
Sbjct: 327 QQVIVQGVYELYDLEETP-VCWRDDTERTNRLVFIGRNLDKDILKQLF 373
>gi|300705549|ref|YP_003747152.1| cobalamin synthesis protein CobW-like protein [Ralstonia
solanacearum CFBP2957]
gi|299073213|emb|CBJ44571.1| putative Cobalamin synthesis protein cobW homolog; putative GTPase
[Ralstonia solanacearum CFBP2957]
Length = 359
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 164/305 (53%), Gaps = 29/305 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKK---QGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL+ L L ++ + QFD +VIETTG+A P PV +TF D+ ++
Sbjct: 62 MSNGCICCTIRGDLLTALSDLVSRRDKGELQFDRVVIETTGVANPGPVAQTFFMDDEIAS 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD V+TLVD+KH Q L++ + EA QV +AD I + K DLV+ ++ +L
Sbjct: 122 RYLLDAVVTLVDAKHGNQQLDKQE------EAQRQVGFADAIFITKGDLVSAADVDALRH 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEVHVDNSHCATHHHESAHGH 175
R+ H+N AP++ A +G +D + + G++L ID + ++ H H H+ H
Sbjct: 176 RLLHMNPRAPIRTASFGDTPIDTIFDLRGFNLNAKLEIDPDFLREDDHDHGHDHDHDHAC 235
Query: 176 HEG----------------HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGED 219
G HH + H ++S SE + +++++L ++ GE
Sbjct: 236 SPGCDHDHDHDHGHGHGHHHHGHAHHTDRIASFVFRSERPFNYTKLEEFLSGVLNVYGEK 295
Query: 220 LYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
L R KG+L + G +++ VFQGVH + G W E N++VFIG +L + KG
Sbjct: 296 LLRYKGVLYMEGVDRKVVFQGVHQLMGSDVGGKWD-SETPGNRMVFIGVDLPRDIILKGL 354
Query: 280 KGCLA 284
+ CLA
Sbjct: 355 ENCLA 359
>gi|398993900|ref|ZP_10696833.1| putative GTPase, G3E family [Pseudomonas sp. GM21]
gi|398133558|gb|EJM22752.1| putative GTPase, G3E family [Pseudomonas sp. GM21]
Length = 323
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 151/281 (53%), Gaps = 27/281 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L ++ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDSGDIAFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV E +L+E
Sbjct: 121 RYILDGIITLVDAAHAETHLTQTI-------AQAQIGFADRLLVSKRDLVDEATFTALSE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ +G +D+ +L V G++L + + G
Sbjct: 174 RLTRINRRAPIRVVDHGKIDLAELLDVRGFNL-----------------NADLGGGVSLR 216
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + ++ LD+D++ +++ L+E+ G+ L R KG+L++ G ++ VF
Sbjct: 217 PVSKAPSIDRISSLVLRTDKPLDIDKLSEFMNELLEDHGKQLLRYKGVLNILGEPRRMVF 276
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W E R + +VFI +L E +R+GF
Sbjct: 277 QGVLKLYGFDWDTEWAEGEARESVIVFIADDLPEDKIREGF 317
>gi|449514474|ref|XP_004177218.1| PREDICTED: COBW domain-containing protein 1 isoform 2 [Taeniopygia
guttata]
Length = 349
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 149/287 (51%), Gaps = 44/287 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + VK + L +++ G+FD+I++ETTGLA P V F D + +
Sbjct: 87 LRNGCLCCSVKDNGVKAIENLMQRR-GKFDYILLETTGLADPGAVASMFWVDSELGSDIY 145
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG++++VD+KH +QHL E KP ++NEA QVA AD II+NK DLV+E EL + ++
Sbjct: 146 LDGIVSVVDAKHGLQHLTEEKPEGLINEASRQVALADLIIINKTDLVSEEELNKVRTSVR 205
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + S+ H ++ H
Sbjct: 206 SINGFVKILETQRSSLQKKL-------------------------EHVKTTQAH------ 234
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
D A+ +VT G + + ++ +++ L+ EK D+ R+KG++S+ G
Sbjct: 235 ---LDKAIITVTFDIPGNIKEENLNLFIQNLLWEKNVKDKTGCTMDVIRLKGLVSIQGKS 291
Query: 234 QQYVFQGVHSTLD-GCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
Q + QGVH D AW DEKR N+LV IGRNLD+ +++ F
Sbjct: 292 HQVIVQGVHELYDLEETSVAWKEDEKRTNRLVLIGRNLDKEIIKEVF 338
>gi|431898661|gb|ELK07041.1| COBW domain-containing protein 2 [Pteropus alecto]
Length = 394
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 158/288 (54%), Gaps = 27/288 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGVDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD II+NK DLV+E +L L I+
Sbjct: 162 LDGIITVVDSKYGLKHLAEEKPDGLINEASRQVALADIIIINKTDLVSEEDLNKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + VD+ VL DL DS + + H + H
Sbjct: 222 SINGLGKILETQRSRVDLSNVL-----DLHAFDSLSGI-SLQKKLQHLPTTQPH------ 269
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
D ++ +VT G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 270 ---LDQSIITVTFEVPGNAKEESLNVFIQNLLWEKNVRNKDDDCMEVIRLKGLVSIKDKR 326
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 327 QQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLIGRNLDKDILKQLF 373
>gi|388546399|ref|ZP_10149675.1| cobalamin synthesis protein/P47K [Pseudomonas sp. M47T1]
gi|388275636|gb|EIK95222.1| cobalamin synthesis protein/P47K [Pseudomonas sp. M47T1]
Length = 317
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 150/281 (53%), Gaps = 31/281 (11%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
NGC+CCT+ DL K L L ++ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 NGCVCCTIHTDLTKALYLLMERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRERY 122
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
LDG+ITLVD+ +A HL + A QV +ADR++++K DLV+ +L+ER+
Sbjct: 123 ILDGIITLVDAANAEVHLAQTI-------AQAQVGFADRLLVSKTDLVSPHAFEALSERL 175
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN AP+++ ++G +D+ +L V G++L N +A
Sbjct: 176 TRINRRAPIRVVRHGEIDLAELLDVRGFNL----------NGSLNVRPVVAADSLDR--- 222
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
+SS+ + +E LD+D++ ++ +L+E+ G L R KG+L+++G +++ VFQG
Sbjct: 223 --------ISSMVLRTEQPLDIDKLSAFMNQLLEDHGRQLLRYKGVLNIAGEDRRLVFQG 274
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
V W E R + +VFI +L E +R GF
Sbjct: 275 VLKLYGFDWDTEWSEGEVRESVMVFIADDLPEATIRAGFNA 315
>gi|345785276|ref|XP_541292.3| PREDICTED: uncharacterized protein LOC484176 [Canis lupus
familiaris]
Length = 395
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 158/288 (54%), Gaps = 27/288 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGVDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD II+NK DLV+E +L L I+
Sbjct: 162 LDGIITVVDSKYGLKHLEEEKPDGLINEASRQVALADIIIINKTDLVSEEDLSKLRAAIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + VD+ VL DL DS + + H + H
Sbjct: 222 SINGLGKILETQRSRVDLSNVL-----DLHAFDSLSGI-SLQKKLQHVPTTQPH------ 269
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
D ++ +VT G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 270 ---LDQSIITVTFEVPGNAKEESLNVFIQNLLWEKNIRNKDDDCMEVIRLKGLVSIKDKA 326
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
+Q + QGVH L+ P +W D +R N+LV IGRNLD+ LR+ F
Sbjct: 327 KQVIVQGVHELYDLEETP-LSWKDDTERTNRLVLIGRNLDKEILRQLF 373
>gi|358413473|ref|XP_003582577.1| PREDICTED: COBW domain-containing protein 2 isoform 1 [Bos taurus]
Length = 398
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 158/288 (54%), Gaps = 27/288 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L KKK G+FD+I++ETTGLA P V F D + +
Sbjct: 106 LRNGCLCCSVKDNGLRAIENLMKKK-GKFDYILLETTGLADPGAVASMFWVDAELGVDIY 164
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD II+NK DLV+E +L L ++
Sbjct: 165 LDGIITVVDSKYGLKHLAEEKPDGLINEASRQVALADIIIINKTDLVSEEDLNKLRTTVR 224
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + VD+ VL DL DS + + H + H
Sbjct: 225 SINGLGKILETQRSRVDLAKVL-----DLHAFDSLSGI-SLQKKLQHVPTTQPH------ 272
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
D ++ +VT G + + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 273 ---LDQSIITVTFEVPGNAEEESLNVYIQNLLWEKNVRNRDDACMEVIRLKGLVSIKDKP 329
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P W D +R N+LV IGRNLD+ L++ F
Sbjct: 330 QQVIVQGVHELYDLEETPVN-WEDDSERTNRLVLIGRNLDKDILKQLF 376
>gi|253687485|ref|YP_003016675.1| cobalamin synthesis protein P47K [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754063|gb|ACT12139.1| cobalamin synthesis protein P47K [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 328
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 152/287 (52%), Gaps = 31/287 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT +L LL L FDH++IE TG+A P PV +TF + E++ +
Sbjct: 69 LSNGCICCTQSNELADALLDLIDGVDNGTLDFDHVIIECTGMADPGPVAQTFFSHEVICE 128
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA Q L++ F + ++ Q+ YADRI+L K D+ E E +L
Sbjct: 129 RFVLDGIITLVDAVHAQQQLDQ----FTIAQS--QIGYADRILLTKTDVANEDE--TLLP 180
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDL-ERIDSEVHVDNSHCATHHHESAHGHHE 177
R++ INA AP+ +G +D+ + + G+ L + +D + V ++
Sbjct: 181 RLQRINARAPIYPVVHGDIDLSVLFNIDGFVLSDELDVKTPVFRFIAPAQNN-------- 232
Query: 178 GHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYV 237
V S+ + ++L V D +E L+ + ++L R KGIL+++G +++ +
Sbjct: 233 -----------VQSIVVYLNKAVELQAVSDVMENLLLQFSDNLLRYKGILAINGDDRRLL 281
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
FQGV + W PDE+R + LVFIG +L E +R F A
Sbjct: 282 FQGVQRLYSADWDREWQPDEERKSVLVFIGVDLPEQEIRDAFARLTA 328
>gi|440902528|gb|ELR53311.1| COBW domain-containing protein 2 [Bos grunniens mutus]
Length = 398
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 158/288 (54%), Gaps = 27/288 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L KKK G+FD+I++ETTGLA P V F D + +
Sbjct: 106 LRNGCLCCSVKDNGLRAIENLMKKK-GKFDYILLETTGLADPGAVASMFWVDAELGVDIY 164
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD II+NK DLV+E +L L I+
Sbjct: 165 LDGIITVVDSKYGLKHLAEEKPDGLINEASRQVALADIIIINKTDLVSEEDLNKLRTTIR 224
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + VD+ VL DL DS + + H + H
Sbjct: 225 SINGLGKILETQRSRVDLAKVL-----DLHAFDSLSGI-SLQKKLQHVPTTQPH------ 272
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
D ++ +VT G + + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 273 ---LDQSIITVTFEVPGNAEEESLNVYIQDLLWEKNVRNRDDACMEVIRLKGLVSIKDKP 329
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P W D +R N+LV IGRNLD+ L++ F
Sbjct: 330 QQVIVQGVHELYDLEETPVN-WEDDSERTNRLVLIGRNLDKDILKQLF 376
>gi|424073870|ref|ZP_17811283.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|407995368|gb|EKG35900.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
Length = 325
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 153/282 (54%), Gaps = 26/282 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+
Sbjct: 123 RYILDGIITLVDAAHADTHLAQTI-------AQAQIGFADRLLVSKRDLVDDAAFEALSA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN APV++ ++G +D+ +L V G++L + D + G+
Sbjct: 176 RLTRINRRAPVRIVEHGKIDLAELLDVRGFNL-------NADLGGGMILRPLAPVGNSAD 228
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + SE L+LD + +++ L+E+ G+ L R KG+L++ ++ VF
Sbjct: 229 R---------ISSLVLRSEKPLNLDRLSEFMNELLEDHGKQLLRYKGVLNIEDEPRKMVF 279
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W EKR + +VFI L E +R GF+
Sbjct: 280 QGVLKLYGFDWDTEWAEGEKRESVIVFIADELPEEKMRAGFE 321
>gi|289675893|ref|ZP_06496783.1| cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K
[Pseudomonas syringae pv. syringae FF5]
Length = 325
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 153/282 (54%), Gaps = 26/282 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+
Sbjct: 123 RYILDGIITLVDAAHADTHLAQTI-------AQAQIGFADRLLVSKRDLVDDAAFEALSA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L V G++L + D + G+
Sbjct: 176 RLTRINRRAPIRIVEHGRIDLAELLDVRGFNL-------NADLGGGMILRPLAPAGNSAD 228
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + SE L+LD + +++ L+E+ G+ L R KG+L++ ++ VF
Sbjct: 229 R---------ISSLVLRSEKPLNLDRLSEFMNELLEDHGKQLLRYKGVLNIEDEPRKMVF 279
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W EKR + +VFI L E +R GF+
Sbjct: 280 QGVLKLYGFDWDTEWAEGEKRESVIVFIADELPEEKIRAGFE 321
>gi|422616003|ref|ZP_16684710.1| cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K
[Pseudomonas syringae pv. japonica str. M301072]
gi|440722283|ref|ZP_20902666.1| cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K
[Pseudomonas syringae BRIP34876]
gi|440725996|ref|ZP_20906255.1| cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K
[Pseudomonas syringae BRIP34881]
gi|443642273|ref|ZP_21126123.1| Putative GTP-binding protein [Pseudomonas syringae pv. syringae
B64]
gi|330895498|gb|EGH27809.1| cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K
[Pseudomonas syringae pv. japonica str. M301072]
gi|440361812|gb|ELP99029.1| cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K
[Pseudomonas syringae BRIP34876]
gi|440367541|gb|ELQ04600.1| cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K
[Pseudomonas syringae BRIP34881]
gi|443282290|gb|ELS41295.1| Putative GTP-binding protein [Pseudomonas syringae pv. syringae
B64]
Length = 325
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 153/282 (54%), Gaps = 26/282 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+
Sbjct: 123 RYILDGIITLVDAAHADTHLAQTI-------AQAQIGFADRLLVSKRDLVDDAAFEALSA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L V G++L + D + G+
Sbjct: 176 RLTRINRRAPIRIVEHGRIDLAELLDVRGFNL-------NADLGGGMILRPLAPAGNSAD 228
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + SE L+LD + +++ L+E+ G+ L R KG+L++ ++ VF
Sbjct: 229 R---------ISSLVLRSEKPLNLDRLSEFMNELLEDHGKQLLRYKGVLNIEDEPRKMVF 279
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W EKR + +VFI L E +R GF+
Sbjct: 280 QGVLKLYGFDWDTEWAEGEKRESVIVFIADELPEEKIRAGFE 321
>gi|325104547|ref|YP_004274201.1| cobalamin synthesis protein P47K [Pedobacter saltans DSM 12145]
gi|324973395|gb|ADY52379.1| cobalamin synthesis protein P47K [Pedobacter saltans DSM 12145]
Length = 341
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 147/282 (52%), Gaps = 17/282 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
++NGC+CC+V G+L +L +L +FDH++IETTG+A P+ V F TD + K
Sbjct: 75 LSNGCICCSVNGELSDLLNKLVTGPY-EFDHLIIETTGIADPSAVAAVFMTDYNIQSVFK 133
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDGVI LVD + + L V EA +Q+A+AD II NK D + ++ + ++
Sbjct: 134 LDGVICLVDCVNVLDVLG------VEEEASQQIAFADYIIYNKKDEADKDKIEEIKQKTT 187
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+N A + A YG V+ +L + YD + ++ V NS E E HHH
Sbjct: 188 ALNPFADFEFANYGKVETKKLLSLNAYDKATVRFKLGVPNSK----GKEVVKIASESHHH 243
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
+ + S + V E + DL ++ + ++ +G YR+KGI+++ G +Q + Q V
Sbjct: 244 D------IVSQSFVFEQSFDLMKLRHYFTVMLMIQGAYFYRIKGIINIEGINRQLILQSV 297
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
+ G AW D KR +LVFIG+NL L KG + C
Sbjct: 298 KGSPVFTDGDAWENDTKRETRLVFIGKNLRRDILEKGLRQCF 339
>gi|299068380|emb|CBJ39604.1| putative Cobalamin synthesis protein cobW homolog; putative GTPase
[Ralstonia solanacearum CMR15]
Length = 360
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 163/309 (52%), Gaps = 36/309 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKK---QGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDLV L L ++ + QFD +VIETTG+A P PV +TF D+ ++
Sbjct: 62 MSNGCICCTIRGDLVAALSDLLTRRDKGELQFDRVVIETTGVANPGPVAQTFFMDDEIAA 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD VITLVD+KH Q L++ + EA QV +AD I + K DLV++ ++ +L
Sbjct: 122 RYLLDAVITLVDAKHGNQQLDKQE------EAQRQVGFADAIFITKGDLVSDDDVEALRH 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVD------------------ 160
R+ H+N AP++ A +G +D + + G++L ++++ +D
Sbjct: 176 RLLHMNPRAPIRTANFGEAPIDTIFDLRGFNL---NAKLEIDPDFLREDDHDHDHGHEHD 232
Query: 161 ---NSHCATHHHESAHGHHEGHHHNHMHDSA--VSSVTIVSEGTLDLDEVDDWLERLIEE 215
+ C H H H H+ ++S SE + +++++L ++
Sbjct: 233 HACSPDCDHDHDHGHDHGHGHHQHHGHAHHTDRIASFVFRSERPFNYTKLEEFLSGVLNV 292
Query: 216 KGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETAL 275
GE L R KG+L + G +++ VFQGVH + G W E N++VFIG +L +
Sbjct: 293 YGEKLLRYKGVLYMEGVDRKVVFQGVHQLMGSDVGGKWD-GETPGNRMVFIGVDLPRDTI 351
Query: 276 RKGFKGCLA 284
KG + CLA
Sbjct: 352 LKGLENCLA 360
>gi|447918414|ref|YP_007398982.1| putative cobalamin synthesis-like protein [Pseudomonas poae
RE*1-1-14]
gi|445202277|gb|AGE27486.1| putative cobalamin synthesis-like protein [Pseudomonas poae
RE*1-1-14]
Length = 319
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 153/281 (54%), Gaps = 31/281 (11%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEDLRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+E
Sbjct: 121 RYILDGIITLVDAAHAEHHLTQTI-------AQAQIGFADRLLVSKRDLVDDATFDALSE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ +G +D+ +L V G++L N+ + A
Sbjct: 174 RLTRINRRAPIRVVDHGKIDLAELLDVRGFNL----------NAGMSLRPVSKAPSIDR- 222
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + ++ LD+D + +++ L+E+ G+ L R KG+L+++G +++ VF
Sbjct: 223 ----------ISSLVLRTDQPLDIDRLSEFMNELLEDHGKQLLRYKGVLNIAGEDRRMVF 272
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W E R + +VFI L E +R GF
Sbjct: 273 QGVLKLYGFDWDTEWVEGEVRESVIVFIADELPEQKIRDGF 313
>gi|302187991|ref|ZP_07264664.1| cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K
[Pseudomonas syringae pv. syringae 642]
Length = 325
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 153/282 (54%), Gaps = 26/282 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+
Sbjct: 123 RYILDGIITLVDAAHADTHLAQTI-------AQAQIGFADRLLVSKRDLVDDAAFEALSA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L V G++L + D + G+
Sbjct: 176 RLTRINRRAPIRIVEHGRIDLAELLDVRGFNL-------NADLGSGMILRPLAPVGNSAD 228
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + SE L+LD + +++ L+E+ G+ L R KG+L++ ++ VF
Sbjct: 229 R---------ISSLVLRSEKPLNLDRLSEFMNELLEDHGKQLLRYKGVLNIEDEPRKMVF 279
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W EKR + +VFI L E +R GF+
Sbjct: 280 QGVLKLYGFDWDTEWAEGEKRESVIVFIADELPEEKIRAGFE 321
>gi|359068142|ref|XP_003586435.1| PREDICTED: COBW domain-containing protein 2 isoform 2 [Bos taurus]
Length = 398
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 158/288 (54%), Gaps = 27/288 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L KKK G+FD+I++ETTGLA P V F D + +
Sbjct: 106 LRNGCLCCSVKDNGLRAIENLMKKK-GKFDYILLETTGLADPGAVASMFWVDAELGVDIY 164
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD II+NK DLV+E +L L ++
Sbjct: 165 LDGIITVVDSKYGLKHLAEEKPDGLINEASRQVALADIIIINKTDLVSEEDLNKLRTTVR 224
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + VD+ VL DL DS + + H + H
Sbjct: 225 SINGLGKILETQRSRVDLAKVL-----DLHAFDSLSGI-SLQKKLQHVPTTQPH------ 272
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
D ++ +VT G + + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 273 ---LDQSIITVTFEVPGNAEEESLNVYIQNLLWEKNVRNRDDACMEVIRLKGLVSIKDKP 329
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P W D +R N+LV IGRNLD+ L++ F
Sbjct: 330 QQVIVQGVHELYDLEETPVN-WEDDSERTNRLVLIGRNLDKDILKQLF 376
>gi|152984575|ref|YP_001350576.1| hypothetical protein PSPA7_5244 [Pseudomonas aeruginosa PA7]
gi|150959733|gb|ABR81758.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 334
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 154/282 (54%), Gaps = 24/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CC++ DL K L L +++ FD +VIE TGLA PAPV +TF DE + Q
Sbjct: 68 LSNGCVCCSINTDLEKALFLLLERRDNGEIDFDRLVIECTGLADPAPVAQTFFADEELCQ 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ +A +HL E A QV +ADRI+++K DLV +L +
Sbjct: 128 RYVLDGIITLVDAANAERHLQETI-------AQAQVGFADRILVSKTDLVDAATFEALGQ 180
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ IN A V + ++G +D+ +L V G++L + D A +
Sbjct: 181 RLQRINRRALVHVVEHGRIDLANLLDVRGFNL-------NADLGPGIGLRPLRAVAAKDS 233
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+ ++ + S+ LDL+ + ++++ L++ G L R KG+L+++G ++ VF
Sbjct: 234 RDR-------IGTLVLRSDTPLDLERLSEFMDDLLQWHGNSLLRYKGVLNIAGEPRRLVF 286
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W DE R + +VFIG NL E ++R+GF+
Sbjct: 287 QGVLRLYGFDWDSEWRDDEARESVIVFIGDNLPEDSIRQGFE 328
>gi|419953929|ref|ZP_14470071.1| Cobalamin synthesis protein [Pseudomonas stutzeri TS44]
gi|387969304|gb|EIK53587.1| Cobalamin synthesis protein [Pseudomonas stutzeri TS44]
Length = 323
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 155/287 (54%), Gaps = 29/287 (10%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCT-DELVS 57
+ NGC+CC++ +L K L L L K G+ F+ +VIE TGLA PAPV +TF DEL
Sbjct: 62 LANGCVCCSIHVELEKALYLLLDKLDSGELAFERLVIECTGLADPAPVAQTFFAGDELCE 121
Query: 58 QYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLT 117
+YV LDG+ITLVD+ +A +HL E + A QV +ADRI+L+K DLV ++ +LT
Sbjct: 122 RYV-LDGIITLVDAANAERHLQE-------SIAQAQVGFADRILLSKTDLVASEQVEALT 173
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
+R++ IN AP+ + ++G +++ +L + G++L + T +
Sbjct: 174 QRLQRINRRAPIHIVEHGRIELAELLDIRGFNLNADVAPAPALRPLLPTASKDR------ 227
Query: 178 GHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYV 237
++++ + SE LD+ + ++E L+E G L R KG+L V+G ++ V
Sbjct: 228 -----------IATLVLHSERPLDMQRLSAFMEDLLERHGNSLLRYKGVLEVAGEPRRLV 276
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
FQGV W E R + LVFIG NL E +R GF A
Sbjct: 277 FQGVLRLYGFDWDAEWAAGEARRSVLVFIGDNLPEEDIRNGFAAVQA 323
>gi|162148149|ref|YP_001602610.1| cobalamin synthesis protein [Gluconacetobacter diazotrophicus PAl
5]
gi|161786726|emb|CAP56309.1| Cobalamin synthesis protein [Gluconacetobacter diazotrophicus PAl
5]
Length = 340
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/308 (36%), Positives = 157/308 (50%), Gaps = 51/308 (16%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K++ G+FD I++ETTGLA PAPV +TF DE V +
Sbjct: 58 MNNGCICCTVRGDLIRILGSLMKRR-GKFDGIIVETTGLADPAPVAQTFFVDEDVRGKTR 116
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD V+T+VD+ + +Q L+E EAV Q+A+AD IILNK DLV E + + R
Sbjct: 117 LDAVVTVVDAMNVLQTLDESP------EAVNQIAFADVIILNKTDLVDEAAIAARRARRS 170
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+ VL GG+DL R A H + G H H
Sbjct: 171 TRWRACT---GPSAATSRPIVLDQGGFDLAR------------ALEHAHALRGVHPAHS- 214
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEV-----------------DDWLER--------LIEEK 216
H+ V+S++ V E LD + + W+ R L++ +
Sbjct: 215 ---HEENVTSMSYVVEEPLDAAKFQAWIGALLRTGGRQWWRNRWMRRSWRAWIGALLQAQ 271
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
G D+ R KGIL+ +G +++ FQ VH DG W + R +LVF GRNL+ LR
Sbjct: 272 GADILRAKGILNYAGENRRFAFQAVHMMADGGFIGPWKEGDARDARLVFAGRNLNRPRLR 331
Query: 277 KGFKGCLA 284
+GF+ C A
Sbjct: 332 RGFESCRA 339
>gi|452878275|ref|ZP_21955497.1| hypothetical protein G039_15853 [Pseudomonas aeruginosa VRFPA01]
gi|452185037|gb|EME12055.1| hypothetical protein G039_15853 [Pseudomonas aeruginosa VRFPA01]
Length = 334
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 156/282 (55%), Gaps = 24/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CC++ DL K L L L ++ G+ FD +VIE TGLA PAPV +TF DE + Q
Sbjct: 68 LSNGCVCCSINTDLEKALFLLLERRDNGEIDFDRLVIECTGLADPAPVAQTFFADEELCQ 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ +A +HL E A QV +ADRI+++K DLV +L +
Sbjct: 128 RYVLDGIITLVDAANAERHLQETI-------AQAQVGFADRILVSKTDLVDAATFEALGQ 180
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ IN A V + ++G +D+ +L V G++L + D A +
Sbjct: 181 RLQRINRRALVHVVEHGRIDLANLLDVRGFNL-------NADLGPGIGLRPLRAVAAKDS 233
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+ ++ + S+ LDL+ + ++++ L++ G L R KG+L+++G ++ VF
Sbjct: 234 RDR-------IGTLVLRSDTPLDLERLSEFMDDLLQWHGNSLLRYKGVLNIAGEPRRLVF 286
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W DE R + +VFIG NL E ++R+GF+
Sbjct: 287 QGVLRLYGFDWDSEWRDDEARESVIVFIGDNLPEDSIRQGFE 328
>gi|226946135|ref|YP_002801208.1| Cobalamin synthesis protein [Azotobacter vinelandii DJ]
gi|226721062|gb|ACO80233.1| Cobalamin synthesis protein [Azotobacter vinelandii DJ]
Length = 323
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 157/284 (55%), Gaps = 33/284 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCT-DELVS 57
+ NGC+CC++ +L K L L ++ FD +VIE TGLA PAPV +TF DEL
Sbjct: 62 LANGCVCCSIHVELEKALFLLLERLDAGELDFDRLVIECTGLADPAPVAQTFFADDELCD 121
Query: 58 QYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLT 117
+YV LDG+ITL+D+ +A +HL E A QV +ADRI+L+K DLV + +L+
Sbjct: 122 RYV-LDGIITLLDAANAGRHLQEAI-------AQAQVGFADRILLSKTDLVAAEAVEALS 173
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
+R++ IN AP+++ ++G +++ +L V G++L + G
Sbjct: 174 QRLQRINRHAPIRIVEHGRIELGELLDVRGFNL-------------------NAEFGQAL 214
Query: 178 GHHH--NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQ 235
G ++++ + SE LDL+++ ++E L+ G+ L R KG+L+++G ++
Sbjct: 215 GLRPLVPAADKDRIATLVLRSEQALDLEKLGLFMEGLLARYGDSLLRYKGVLNLAGESRR 274
Query: 236 YVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
VFQGV + WG DE R + LVFIG +L E +R GF
Sbjct: 275 MVFQGVLRLYGFDWAEEWGADETRESVLVFIGDDLPEEDIRAGF 318
>gi|386334969|ref|YP_006031140.1| cobalamin biosynthesis protein [Ralstonia solanacearum Po82]
gi|334197419|gb|AEG70604.1| cobalamin biosynthesis protein [Ralstonia solanacearum Po82]
Length = 362
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 164/308 (53%), Gaps = 32/308 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKK---QGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL+ L L ++ + QFD +VIETTG+A P PV +TF D+ ++
Sbjct: 62 MSNGCICCTIRGDLLTALSDLVSRRDKGELQFDRVVIETTGVANPGPVAQTFFMDDEIAG 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD V+TLVD+KH Q L++ + EA QV +AD I + K DLV+ ++ +L
Sbjct: 122 RYLLDAVVTLVDAKHGNQQLDKQE------EAQRQVGFADAIFITKGDLVSTADVDALRH 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEVHVDNSHCATHHHESAHGH 175
R+ H+N AP++ A +G +D + + G++L ID + ++ H H H+ H
Sbjct: 176 RLLHMNPRAPIRTASFGDTPIDTIFDLRGFNLNAKLEIDPDFLREDGHDHDHDHDHDHAC 235
Query: 176 HEG-------------------HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK 216
G HH + H ++S SE + +++++L ++
Sbjct: 236 APGCDHDHDHDHGHGHGHGHHHHHGHAHHTDRIASFVFRSERPFNYTKLEEFLSGVLNVY 295
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
GE L R KG+L + G +++ VFQGVH + G W E N++VFIG +L +
Sbjct: 296 GEKLLRYKGVLYMEGVDRKVVFQGVHQLMGSDVGGKWD-SETPGNRMVFIGVDLPRDTIL 354
Query: 277 KGFKGCLA 284
KG + CLA
Sbjct: 355 KGLENCLA 362
>gi|422640537|ref|ZP_16703963.1| cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K
[Pseudomonas syringae Cit 7]
gi|440742498|ref|ZP_20921823.1| cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K
[Pseudomonas syringae BRIP39023]
gi|330952927|gb|EGH53187.1| cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K
[Pseudomonas syringae Cit 7]
gi|440377335|gb|ELQ13984.1| cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K
[Pseudomonas syringae BRIP39023]
Length = 325
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 153/282 (54%), Gaps = 26/282 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 LSNGCVCCTIHTDLTKALYLLLERLDSGEIVFDRLVIECTGLADPAPVAQTFFIDEELRE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+
Sbjct: 123 RYILDGIITLVDAAHADTHLAQTI-------AQAQIGFADRLLVSKRDLVDDAAFDALSA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L V G++L + D + G+
Sbjct: 176 RLTRINRRAPIRIVEHGRIDLAELLDVRGFNL-------NADLGGGMILRPLAPTGNSAD 228
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + SE L+LD + +++ L+E+ G+ L R KG+L++ ++ VF
Sbjct: 229 R---------ISSLVLRSEKPLNLDRLSEFMNELLEDHGKQLLRYKGVLNIEYEPRKMVF 279
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W EKR + +VFI L E +R GF+
Sbjct: 280 QGVLKLYGFDWDTEWAEGEKRESVIVFIADELPEEKIRAGFE 321
>gi|410355671|gb|JAA44439.1| COBW domain containing 2 [Pan troglodytes]
Length = 395
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 158/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+VR + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVRDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 326 SQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLIGRNLDKDILKQLF 373
>gi|22122605|ref|NP_666209.1| COBW domain-containing protein 1 [Mus musculus]
gi|81902054|sp|Q8VEH6.1|CBWD1_MOUSE RecName: Full=COBW domain-containing protein 1; AltName:
Full=Cobalamin synthase W domain-containing protein 1
gi|17391112|gb|AAH18472.1| COBW domain containing 1 [Mus musculus]
gi|74205575|dbj|BAE21084.1| unnamed protein product [Mus musculus]
Length = 393
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 158/293 (53%), Gaps = 28/293 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 101 LRNGCLCCSVKDSGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 159
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP +VNEA QVA AD I++NK DLV+E EL +L I+
Sbjct: 160 LDGIITVVDSKYGLKHLTEEKPDGLVNEATRQVALADMILINKTDLVSEEELNNLRTTIR 219
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + V + V + +L + YD L I + + + A H
Sbjct: 220 SINGLGKVLETQRSRVHLSNILDLHAYDILSGISLQKKLQHVSTAPH------------- 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
D ++ +VT G+ + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 ----LDQSIVTVTFEVPGSAKEECLNVFIQNLLWEKNVKNKDGHCMEVIRLKGLVSIKDK 322
Query: 233 EQQYVFQGVHSTLDGCPGKA-WGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QQ + QG+H D W D +R +LVFIGRNLD+ L++ F +A
Sbjct: 323 PQQMIVQGIHELYDLEESLVNWKDDAERACQLVFIGRNLDKDVLQQLFLTAVA 375
>gi|302820938|ref|XP_002992134.1| hypothetical protein SELMODRAFT_45737 [Selaginella moellendorffii]
gi|300140060|gb|EFJ06789.1| hypothetical protein SELMODRAFT_45737 [Selaginella moellendorffii]
Length = 308
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 147/264 (55%), Gaps = 22/264 (8%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CC V+ V+ L QL +++ + +H+++ETTGLA P PV T D+ + V+LD
Sbjct: 66 NGCVCCNVKHSFVQALEQLTQRRD-RCEHVLLETTGLANPGPVASTLWIDDQLESSVRLD 124
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIKHI 123
++T+VD+++ L++ + EA Q+A+AD IILNK+DLV E L + +R+ I
Sbjct: 125 AIVTVVDARNLQHQLDDRED----AEAFLQLAHADVIILNKVDLVDECTLTDVKQRVAGI 180
Query: 124 NAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHHNH 183
N++A V A VD+D VL Y AT + E H +
Sbjct: 181 NSIATVLEAVRCEVDLDVVLNRRAY----------------ATRDSINLR-ELERKHDAN 223
Query: 184 MHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHS 243
+H V++ +I + + L +VDDWL ++ EK ++YRMK IL V G+++ ++ Q V
Sbjct: 224 LHGQTVTTTSIEDDRPVILKKVDDWLGDILWEKKMEIYRMKAILHVHGAQEMHLLQAVRE 283
Query: 244 TLDGCPGKAWGPDEKRINKLVFIG 267
+ PG+ W P EKR +K+V IG
Sbjct: 284 LYEILPGRLWRPAEKRQSKIVIIG 307
>gi|13569717|gb|AAK31208.1|AF353305_1 dopamine responsive protein [Rattus norvegicus]
Length = 394
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 159/293 (54%), Gaps = 28/293 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + +K + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 102 LRNGCLCCSVKDNGLKAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 160
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP +VNEA QVA AD I++NK DLV+E EL L I+
Sbjct: 161 LDGIITVVDSKYGLKHLTEEKPDGLVNEATRQVALADMILINKTDLVSEEELNKLRTTIR 220
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + V + + +L + YD L I + + + A H
Sbjct: 221 SINGLGKVLETQRSRTHLSNILDLHAYDTLSGISLQKKLQHVSTAPH------------- 267
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
D ++ +VT G+ + + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 268 ----LDQSIVTVTFDVPGSAEEESLNVFIQNLLWEKNVKNKDGRCMEVIRLKGLVSIKDK 323
Query: 233 EQQYVFQGVHSTLDGCPGKA-WGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QQ + QG+H + + W D +R +LVFIG+NLD+ L++ F +A
Sbjct: 324 PQQMIVQGIHELYELEESRVNWKDDAERACQLVFIGKNLDKDILQQLFITAVA 376
>gi|424069441|ref|ZP_17806887.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|407994697|gb|EKG35260.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
Length = 325
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 152/281 (54%), Gaps = 26/281 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+
Sbjct: 123 RYILDGIITLVDAAHADTHLAQTI-------AQAQIGFADRLLVSKRDLVDDAAFDALSA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L V G++L + D + G+
Sbjct: 176 RLTRINRRAPIRIVEHGKIDLAELLDVRGFNL-------NADLGGGMILRPLAPIGNSAD 228
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + SE L+LD + +++ L+E+ G+ L R KG+L++ ++ VF
Sbjct: 229 R---------ISSLVLRSEKPLNLDRLSEFMNELLEDHGKQLLRYKGVLNIEDEPRKMVF 279
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W EKR + +VFI L E +R GF
Sbjct: 280 QGVLKLYGFDWDTEWAEGEKRESVIVFIADELPEEKIRAGF 320
>gi|148747412|ref|NP_598219.2| COBW domain-containing protein 1 [Rattus norvegicus]
gi|110278902|sp|Q99MB4.2|CBWD1_RAT RecName: Full=COBW domain-containing protein 1; AltName:
Full=Cobalamin synthase W domain-containing protein 1
gi|55778277|gb|AAH86376.1| COBW domain containing 1 [Rattus norvegicus]
Length = 394
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 159/293 (54%), Gaps = 28/293 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + +K + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 102 LRNGCLCCSVKDNGLKAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 160
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP +VNEA QVA AD I++NK DLV+E EL L I+
Sbjct: 161 LDGIITVVDSKYGLKHLTEEKPDGLVNEATRQVALADMILINKTDLVSEEELNKLRTTIR 220
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + V + + +L + YD L I + + + A H
Sbjct: 221 SINGLGKVLETQRSRTHLSNILDLHAYDTLSGISLQKKLQHVSTAPH------------- 267
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
D ++ +VT G+ + + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 268 ----LDQSIVTVTFDVPGSAEEESLNVFIQNLLWEKNVKNKDGRCMEVIRLKGLVSIKDK 323
Query: 233 EQQYVFQGVHSTLDGCPGKA-WGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QQ + QG+H + + W D +R +LVFIG+NLD+ L++ F +A
Sbjct: 324 PQQMIVQGIHELYELEESRVNWKDDAERACQLVFIGKNLDKDILQQLFITAVA 376
>gi|227329690|ref|ZP_03833714.1| putative GTP-binding protein YjiA [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 328
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 154/287 (53%), Gaps = 31/287 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT +L LL L FDH++IE TG+A P PV +TF + E++ +
Sbjct: 69 LSNGCICCTQSNELADALLDLVDGVDNGTLDFDHVIIECTGMADPGPVAQTFFSHEIICE 128
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA Q L++ F + ++ Q+ YADRI+L K D+ +E E +L
Sbjct: 129 RFVLDGIITLVDAVHAQQQLDQ----FTIAQS--QIGYADRILLTKTDVASEDE--TLLP 180
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDL-ERIDSEVHVDNSHCATHHHESAHGHHE 177
R++ INA AP+ +G +D+ + + G+ L +++D + V ++
Sbjct: 181 RLQRINARAPIYPVVHGDIDLSVLFNIDGFVLSDKLDVKTPVFRFVAPAQNN-------- 232
Query: 178 GHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYV 237
V S+ + + ++L V D +E L+ + ++L R KGIL+++G +++ +
Sbjct: 233 -----------VQSIVVYLDKAVELQSVSDVMENLLLQFSDNLLRYKGILAINGDDRRLL 281
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
FQGV + W DE+R + LVFIG +L E +R F A
Sbjct: 282 FQGVQRLYSADWDREWHADEERKSVLVFIGVDLPEQEIRDAFARLTA 328
>gi|302790742|ref|XP_002977138.1| hypothetical protein SELMODRAFT_106303 [Selaginella moellendorffii]
gi|300155114|gb|EFJ21747.1| hypothetical protein SELMODRAFT_106303 [Selaginella moellendorffii]
Length = 349
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 147/264 (55%), Gaps = 22/264 (8%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CC V+ V+ L QL +++ + +H+++ETTGLA P PV T D+ + V+LD
Sbjct: 86 NGCVCCNVKHSFVQALEQLTQRRD-RCEHVLLETTGLANPGPVASTLWIDDQLESSVRLD 144
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIKHI 123
++T+VD+++ L++ + EA Q+A+AD IILNK+DLV E L + +R+ I
Sbjct: 145 AIVTVVDARNLQHQLDDRED----AEAFLQLAHADVIILNKVDLVDECTLTDVKQRVAGI 200
Query: 124 NAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHHNH 183
N++A V A VD+D VL Y AT + E H +
Sbjct: 201 NSIATVLEAVRCEVDLDVVLNRRAY----------------ATRDSINLR-ELERKHDAN 243
Query: 184 MHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHS 243
+H V++ +I + + L +VDDWL ++ EK ++YRMK IL V G+++ ++ Q V
Sbjct: 244 LHGQTVTTTSIEDDRPVILKKVDDWLGDILWEKKMEIYRMKAILHVHGAQEMHLLQAVRE 303
Query: 244 TLDGCPGKAWGPDEKRINKLVFIG 267
+ PG+ W P EKR +K+V IG
Sbjct: 304 LYEILPGRLWRPAEKRQSKIVIIG 327
>gi|347539331|ref|YP_004846756.1| CobW/P47K family protein [Pseudogulbenkiania sp. NH8B]
gi|345642509|dbj|BAK76342.1| CobW/P47K family protein [Pseudogulbenkiania sp. NH8B]
Length = 329
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 148/286 (51%), Gaps = 20/286 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGCLCCT+RGDL + L L ++++ F +VIETTGLA P P+ +TF +D+ +++
Sbjct: 61 MTNGCLCCTIRGDLSRHLHSLYQRRRDGELAFTRLVIETTGLADPTPIAQTFFSDDTLAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGV+ +VD+ H Q L+ V A +Q +ADR++++K DLV E L L
Sbjct: 121 AYALDGVLAVVDAVHGEQQLDG---HLV---ARKQAGFADRLLISKTDLVDEASLEHLGA 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN+ A G + GV G+ H+D + E
Sbjct: 175 RLAAINSQAGQHRLVQGRIAPALAFGVRGF---------HLDENLLRPATGERNLSFRPA 225
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+ D ++++ + +G LDL + ++ RL+E+ E L R KG+L+++G ++ VF
Sbjct: 226 ATRSFADD--IAALHLAHDGPLDLARISAFMNRLVEQHAEQLLRYKGVLAIAGEPRRLVF 283
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QGVH G+ W DE +V IG+ L A+R F CLA
Sbjct: 284 QGVHRITGFDYGREWQDDETPRCDIVLIGQQLPADAIRAEFAACLA 329
>gi|149062619|gb|EDM13042.1| COBW domain containing 1, isoform CRA_a [Rattus norvegicus]
Length = 394
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 159/293 (54%), Gaps = 28/293 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + +K + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 102 LRNGCLCCSVKDNGLKAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 160
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP +VNEA QVA AD I++NK DLV+E EL L I+
Sbjct: 161 LDGIITVVDSKYGLKHLTEEKPDGLVNEATRQVALADMILINKTDLVSEEELNKLRTTIR 220
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + V + + +L + YD L I + + + A H
Sbjct: 221 SINGLGKVLETQRSRTHLSNILDLHAYDTLSGISLQKKLQHVSTAPH------------- 267
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
D ++ +VT G+ + + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 268 ----LDQSIVTVTFDVPGSAEEESLNVFIQNLLWEKNVKNKDGRCMEVIRLKGLVSIKDK 323
Query: 233 EQQYVFQGVHSTLDGCPGKA-WGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QQ + QG+H + + W D +R +LVFIG+NLD+ L++ F +A
Sbjct: 324 PQQMIVQGIHELYELEESRVNWKDDAERACQLVFIGKNLDKDILQQLFITAVA 376
>gi|281351706|gb|EFB27290.1| hypothetical protein PANDA_008619 [Ailuropoda melanoleuca]
Length = 394
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 158/288 (54%), Gaps = 27/288 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGVDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG++T+VDSK+ ++HL E KP ++NEA QVA AD II+NK DLV+E +L L I+
Sbjct: 162 LDGIVTVVDSKYGLKHLEEEKPDGLINEASRQVALADIIIINKTDLVSEEDLSKLRTAIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + VD+ VL DL DS + + H + H
Sbjct: 222 SINGLGKILETQRSRVDLSNVL-----DLHAFDSLSGI-SLQKKLQHVPTTQPH------ 269
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
D ++ +VT G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 270 ---LDQSIITVTFEVRGNAKEESLNVFIQNLLWEKNVRNKDNDCMEVIRLKGLVSIKDKS 326
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
+Q + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 327 KQVIVQGVHELYDLEETP-LSWNDDTERTNRLVLIGRNLDKEILKQLF 373
>gi|66047498|ref|YP_237339.1| cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K
[Pseudomonas syringae pv. syringae B728a]
gi|63258205|gb|AAY39301.1| Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K
[Pseudomonas syringae pv. syringae B728a]
Length = 325
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 153/282 (54%), Gaps = 26/282 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 LSNGCVCCTIHTDLTKALYLLLERMDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+
Sbjct: 123 RYILDGIITLVDAAHADTHLAQTI-------AQAQIGFADRLLVSKRDLVDDAAFEALSA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L V G++L + D + G+
Sbjct: 176 RLTRINRRAPIRIVEHGKIDLAELLDVRGFNL-------NADLGGGMILRPLAPAGNSAD 228
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + S+ L+LD + +++ L+E+ G+ L R KG+L++ ++ VF
Sbjct: 229 R---------ISSLVLRSDKPLNLDRLSEFMNELLEDHGKQLLRYKGVLNIEDEPRKMVF 279
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W EKR + +VFI L E +R GF+
Sbjct: 280 QGVLKLYGFDWDTEWAEGEKRESVIVFIADELPEEKIRAGFE 321
>gi|395819164|ref|XP_003782969.1| PREDICTED: COBW domain-containing protein 3 isoform 1 [Otolemur
garnettii]
Length = 395
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 158/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LGNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASIFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA Q+A AD I++NK DLV E +L L I+
Sbjct: 162 LDGIITVVDSKYGLKHLMEEKPDGLINEASRQIALADIILINKTDLVLEEDLNKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGKILETQRSRVDLSDVLDLHAFDSLSGISLQKKLQLVPAIQPH------------ 269
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
D ++ ++T G + + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 270 ----LDQSIVTITFEVPGNVKEESLNVFIQNLLWEKNVRNKDDHCMEVIRLKGLVSIRDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LVFIGRNLD+ L++ F
Sbjct: 326 PQQVIVQGVHELYDLEEAP-VSWKDDTERTNRLVFIGRNLDKDILKQLF 373
>gi|261822467|ref|YP_003260573.1| GTP-binding protein YjiA [Pectobacterium wasabiae WPP163]
gi|261606480|gb|ACX88966.1| cobalamin synthesis protein P47K [Pectobacterium wasabiae WPP163]
gi|385872776|gb|AFI91296.1| Cobalamin synthesis protein P47K [Pectobacterium sp. SCC3193]
Length = 328
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 154/287 (53%), Gaps = 31/287 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT +L LL L FDH++IE TG+A P PV +TF + E++ +
Sbjct: 69 LSNGCICCTQSNELADALLDLIDGVDNGTLDFDHVIIECTGMADPGPVAQTFFSHEIICE 128
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA Q L++ F + ++ Q+ YADRI+L K D+ +E + +L
Sbjct: 129 RFVLDGIITLVDAVHAQQQLDQ----FTIAQS--QIGYADRILLTKTDVASEDD--TLLP 180
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDL-ERIDSEVHVDNSHCATHHHESAHGHHE 177
R++ INA AP+ +G +D+ + + G+ L +++D + V T ++
Sbjct: 181 RLQRINARAPIYPVVHGDIDLSALFNIDGFVLSDKLDVKTPVFRFVAPTQNN-------- 232
Query: 178 GHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYV 237
V S+ + + ++L V D +E L+ + ++L R KGIL+++G ++ +
Sbjct: 233 -----------VQSIVVYLDDAVELQAVSDVMENLLLQFSDNLLRYKGILAINGDNRRLL 281
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
FQGV + W DE+R + LVFIG +L E +R F A
Sbjct: 282 FQGVQRLYSADWDREWQTDEERKSVLVFIGVDLPEQEIRNAFARLTA 328
>gi|301769061|ref|XP_002919946.1| PREDICTED: COBW domain-containing protein 2-like [Ailuropoda
melanoleuca]
Length = 395
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 158/288 (54%), Gaps = 27/288 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGVDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG++T+VDSK+ ++HL E KP ++NEA QVA AD II+NK DLV+E +L L I+
Sbjct: 162 LDGIVTVVDSKYGLKHLEEEKPDGLINEASRQVALADIIIINKTDLVSEEDLSKLRTAIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + VD+ VL DL DS + + H + H
Sbjct: 222 SINGLGKILETQRSRVDLSNVL-----DLHAFDSLSGI-SLQKKLQHVPTTQPH------ 269
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
D ++ +VT G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 270 ---LDQSIITVTFEVRGNAKEESLNVFIQNLLWEKNVRNKDNDCMEVIRLKGLVSIKDKS 326
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
+Q + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 327 KQVIVQGVHELYDLEETP-LSWNDDTERTNRLVLIGRNLDKEILKQLF 373
>gi|417399971|gb|JAA46962.1| Putative cobalamin synthesis protein [Desmodus rotundus]
Length = 383
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 158/288 (54%), Gaps = 27/288 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDSGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWIDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD II+NK DLV+E +L L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEASRQVALADIIIINKTDLVSEEDLNKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + VD+ VL DL DS + + H + H
Sbjct: 222 SINGLGKILETQRSRVDLSNVL-----DLHAFDSLSGI-SLQKKLQHLPAVQPH------ 269
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK------GE--DLYRMKGILSVSGSE 233
D ++ +VT G + ++ +++ L+ EK G+ ++ R+KG++S+
Sbjct: 270 ---LDQSIITVTFEVPGNAKEENLNVFIQNLLWEKDVSNKDGDCMEVIRLKGLVSIKDKP 326
Query: 234 QQYVFQGVHSTLD--GCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGV+ D P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 327 QQVIVQGVYELYDVEETP-VSWKDDTERTNRLVLIGRNLDKDILKQLF 373
>gi|350422224|ref|XP_003493096.1| PREDICTED: uncharacterized GTP-binding protein YjiA-like [Bombus
impatiens]
Length = 343
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 156/285 (54%), Gaps = 18/285 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+V+G+L L QL +K+ FD ++IETTGLA PAP+++TF DEL+
Sbjct: 63 MTNGCICCSVQGELTTALHQLNQKRLNGTLSFDRLIIETTGLADPAPILQTFFIDELIRN 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
+LDGV+TL+D +H +Q L + + VV Q+ +ADR+IL K D +TE +L ++
Sbjct: 123 TFELDGVVTLIDGEHILQQLAQHR---VVR---SQIGFADRLILTKSDRLTEQQLHTVLS 176
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ IN A + +A G + L + + L E+ ++ + +++
Sbjct: 177 RLQLINNKAILFVAVNGEIAKAHWLDIHAFQLSE---ELTINKGFFIIANPNQQIANYQP 233
Query: 179 HHHNHM----HDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQ 234
H HD S + G +D+ +V ++ERLIE G D+ R KGIL++ +
Sbjct: 234 IMHTSSTISPHDDIYSY--LFEAGCVDIKKVGQFVERLIEIHGNDMLRYKGILAIKDNPA 291
Query: 235 QYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
+ + QGVH + GKAW DE++ ++LV I R L L + F
Sbjct: 292 KLIVQGVHKVVGFDYGKAWQDDEQQRSQLVIISRKLPFDRLMQEF 336
>gi|344297691|ref|XP_003420530.1| PREDICTED: COBW domain-containing protein 2 isoform 1 [Loxodonta
africana]
Length = 395
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 156/288 (54%), Gaps = 27/288 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LGNGCLCCSVKDSGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG++T+VDSK+ ++HL E K ++NEA QVA AD II+NK DLV E +L L I+
Sbjct: 162 LDGIVTVVDSKYGLKHLAEDKADGLINEATRQVALADLIIINKTDLVPEEDLSQLRMTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + VD+ VL DL DS + S H SA H
Sbjct: 222 SINGLGKILETQRSRVDLSNVL-----DLHAFDSLSGI--SLQKKLQHVSATQPH----- 269
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
D + +VT G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 270 ---LDQNIITVTFEVPGNAKEESLNVFIQNLLWEKNVRNKDGHCMEVVRLKGLVSIRDRA 326
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LVFIG+NLD+ LR+ F
Sbjct: 327 QQVIVQGVHELYDLEETP-VSWDDDTQRTNRLVFIGKNLDKDILRQLF 373
>gi|17544766|ref|NP_518168.1| hypothetical protein RSc0047 [Ralstonia solanacearum GMI1000]
gi|17427055|emb|CAD13575.1| putative cobalamin synthesis protein [Ralstonia solanacearum
GMI1000]
Length = 362
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 165/311 (53%), Gaps = 38/311 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKK---QGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDLV L L ++ + QFD +VIETTG+A P PV +TF D+ ++
Sbjct: 62 MSNGCICCTIRGDLVAALSDLLTRRDKGELQFDRVVIETTGVANPGPVAQTFFMDDEIAA 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD VITLVD+KH Q L+ + EA QV +AD I + K DLV++ ++ +L
Sbjct: 122 RYLLDAVITLVDAKHGNQQLDRQE------EAQRQVGFADAIFITKGDLVSDDDVEALRH 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVD------------------ 160
R+ H+N AP++ A +G +D + + G++L ++++ +D
Sbjct: 176 RLLHMNPRAPIRTANFGEAPIDTIFDLRGFNL---NAKLEIDPDFLREDDHDHDHGHEHN 232
Query: 161 ---NSHCATHHHESAHGHHEGHHHNHMHDSA----VSSVTIVSEGTLDLDEVDDWLERLI 213
+ C H HH HH+H + ++S SE + +++++L ++
Sbjct: 233 HACSPDCDHDHEHGHDHHHGHGHHHHHGHAHHTDRIASFVFRSERPFNYTKLEEFLSGVL 292
Query: 214 EEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDET 273
GE L R KG+L + G +++ VFQGVH + G W E N++VFIG +L
Sbjct: 293 NVYGEKLLRYKGVLYMEGVDRKVVFQGVHQLMGSDVGGKWD-GETPGNRMVFIGVDLPRD 351
Query: 274 ALRKGFKGCLA 284
+ KG + CLA
Sbjct: 352 TILKGLENCLA 362
>gi|344173196|emb|CCA88335.1| putative Cobalamin synthesis protein cobW homolog; putative GTPase
[Ralstonia syzygii R24]
Length = 358
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 163/304 (53%), Gaps = 28/304 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKK---QGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDLV L L ++ + QFD +VIETTG+A P PV +TF D+ ++
Sbjct: 62 MSNGCICCTIRGDLVAALSDLLTRRDKGELQFDRVVIETTGVANPGPVAQTFFMDDEIAG 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD VITLVD+KH Q L++ + EA QV +AD I + K DLV ++ +L
Sbjct: 122 RYLLDAVITLVDAKHGNQQLDKQE------EAQRQVGFADAIFITKGDLVCADDVDALRH 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEVHVDNSHCATHHHESA--- 172
R+ H+N AP++ A +G +D + + G++L ID + ++ H H H+ A
Sbjct: 176 RLLHMNPRAPIRTANFGDAPIDTIFDLRGFNLNAKLEIDPDFLREDGHDHDHDHDHACSP 235
Query: 173 ------------HGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDL 220
H HH + H ++S SE + +++++L ++ GE L
Sbjct: 236 DCDHDHGHGHDHGHGHHHHHGHAHHTDRIASFVFRSERPFNYGKLEEFLSGVLNVYGEKL 295
Query: 221 YRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
R KG+L + G +++ VFQGVH + G W E N++VFIG +L + KG +
Sbjct: 296 LRYKGVLYMEGVDRKVVFQGVHQLMGSDVGGKW-DGETPGNRMVFIGVDLPRDTILKGLE 354
Query: 281 GCLA 284
CLA
Sbjct: 355 NCLA 358
>gi|321477587|gb|EFX88545.1| hypothetical protein DAPPUDRAFT_304659 [Daphnia pulex]
Length = 379
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 156/299 (52%), Gaps = 36/299 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + VK + L KKK G+FD+I++ETTGLA P P+ F D + +
Sbjct: 97 LRNGCLCCSVKDNGVKAIENLMKKK-GKFDYILLETTGLADPGPIASLFWLDSELCSDIH 155
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDGVITLVD+KH ++ +NEVKP VNEA Q+A AD I+LNK DLV EL L I+
Sbjct: 156 LDGVITLVDAKHGLRQINEVKPDGSVNEATRQIALADVILLNKEDLVIAEELSELKNHIQ 215
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN+ A +G V+++ VL +G Y + AT+ S + H
Sbjct: 216 TINSEATFITTHHGRVNLNEVLDLGLY--------------YQATNLSPSKFSNSSESH- 260
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGE--------DLYRMKGILSVSGSE 233
D +V SVT+ L + VD +L+RL+ EK +++R+KGI+ S E
Sbjct: 261 ---LDLSVRSVTLELNERLTPEIVDTYLQRLLWEKDVVNSLGLTLEIFRIKGIVRYSQPE 317
Query: 234 QQ----YVFQGVHSTLDGCPGKAWGPDEKRIN-----KLVFIGRNLDETALRKGFKGCL 283
+ Q V+ T D P K + ++ + VFIGR+L+ L+ L
Sbjct: 318 SVQPSFVIIQAVYDTYDTMPVKPEATNTADLSSQPDVRFVFIGRHLELAVLKNALLQLL 376
>gi|196008405|ref|XP_002114068.1| hypothetical protein TRIADDRAFT_58162 [Trichoplax adhaerens]
gi|190583087|gb|EDV23158.1| hypothetical protein TRIADDRAFT_58162 [Trichoplax adhaerens]
Length = 334
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 151/287 (52%), Gaps = 44/287 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ VK + L +KK G+FD+I++ETTGLA P P+ F D + +
Sbjct: 79 LRNGCLCCSVKDSGVKAIENLMEKK-GKFDYILLETTGLADPGPIASIFWLDSELGSEIY 137
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG++TL+D K+ ++ L E +P+ ++NE V Q+A AD +I+NK DL+ E E
Sbjct: 138 LDGIVTLIDGKNCLRSLGEERPKGIINECVRQIALADLLIVNKTDLIEEDE--------- 188
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
+N+ A + K S LE + S D +T
Sbjct: 189 SMNSFANIIATKRSS------------GLEILSSRWS-DKDTTST------------SIS 223
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
NH+ + VS+ I EG +DL+ ++ WL+ L+ EK ++ R KG LS G +
Sbjct: 224 NHLEQN-VSTALIEFEGNIDLEPLETWLQDLLWEKNIKNKNNEVMEILRCKGQLSSRGCD 282
Query: 234 QQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
++ +FQ V+ D W +E+RINKLVFIGRN+D L +G +
Sbjct: 283 KRILFQAVYELYDKVETTEWLENERRINKLVFIGRNVDHAILAEGIQ 329
>gi|422671796|ref|ZP_16731161.1| cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K
[Pseudomonas syringae pv. aceris str. M302273]
gi|330969535|gb|EGH69601.1| cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K
[Pseudomonas syringae pv. aceris str. M302273]
Length = 325
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 153/282 (54%), Gaps = 26/282 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+
Sbjct: 123 RYILDGIITLVDAAHADTHLAQTI-------AQAQIGFADRLLVSKRDLVDDAAFEALSA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L V G++L + D + G+
Sbjct: 176 RLTRINRRAPIRIVEHGKIDLAELLDVRGFNL-------NADLGGGMILRPLAPAGNSAD 228
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + S+ L+LD + +++ L+E+ G+ L R KG+L++ ++ VF
Sbjct: 229 R---------ISSLVLRSDKPLNLDRLSEFMNELLEDHGKQLLRYKGVLNIEDEPRKMVF 279
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W EKR + +VFI L E +R GF+
Sbjct: 280 QGVLKLYGFDWDTEWAEGEKRESVIVFIADELPEEKIRAGFE 321
>gi|34596570|gb|AAQ76873.1| COBW domain containing protein [Gorilla gorilla]
Length = 395
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 158/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+VR + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVRDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDVSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVVRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 326 SQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLIGRNLDKDILKQLF 373
>gi|213966761|ref|ZP_03394912.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. tomato T1]
gi|301383269|ref|ZP_07231687.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. tomato Max13]
gi|302062491|ref|ZP_07254032.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. tomato K40]
gi|302133474|ref|ZP_07259464.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. tomato NCPPB 1108]
gi|213928611|gb|EEB62155.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. tomato T1]
Length = 325
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 152/285 (53%), Gaps = 26/285 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+
Sbjct: 123 RYILDGIITLVDAAHADTHLTQTI-------AQAQIGFADRLLVSKRDLVDDAAFDALSA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L V G++L + D T + G
Sbjct: 176 RLTRINRRAPIRIVEHGKIDLAELLDVRGFNL-------NADLGGSMTLRPLAPAGKSSD 228
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
++S+ + S+ L+LD + +++ L+E+ G+ L R KG+L++ ++ VF
Sbjct: 229 R---------ITSLVLRSDKPLNLDRLSEFMNELLEDHGKQLLRYKGVLNIEDESRKMVF 279
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGV W E R + +VFI L E +R GF +
Sbjct: 280 QGVLKLYGFDWDTEWAEGELRESVIVFIADELPEEKIRAGFAAVV 324
>gi|296189694|ref|XP_002742879.1| PREDICTED: COBW domain-containing protein 3-like isoform 1
[Callithrix jacchus]
Length = 395
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 157/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + +K + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLKAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I E T H S
Sbjct: 222 SINGLGQILETQKSRVDLSNVLDLHAFDSLSGISLETEAQRVP-GTEPHISP-------- 272
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
++ +VT G ++++ +++ L+ EK ++ R+KG++S+
Sbjct: 273 -------SIVTVTFEVPGNAKEEQLNVFIQNLLWEKTVKNKDNHCMEVIRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 326 PQQVIVQGVHELYDLEETP-VSWKGDTERTNRLVLIGRNLDKDILKQLF 373
>gi|390457853|ref|XP_003732014.1| PREDICTED: COBW domain-containing protein 3-like [Callithrix
jacchus]
Length = 359
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 157/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + +K + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 67 LRNGCLCCSVKDNGLKAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 126 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIR 185
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I E T H S
Sbjct: 186 SINGLGQILETQKSRVDLSNVLDLHAFDSLSGISLETEAQRVP-GTEPHISP-------- 236
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
++ +VT G ++++ +++ L+ EK ++ R+KG++S+
Sbjct: 237 -------SIVTVTFEVPGNAKEEQLNVFIQNLLWEKTVKNKDNHCMEVIRLKGLVSIKDK 289
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 290 PQQVIVQGVHELYDLEETP-VSWKGDTERTNRLVLIGRNLDKDILKQLF 337
>gi|422587574|ref|ZP_16662244.1| cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K
[Pseudomonas syringae pv. morsprunorum str. M302280]
gi|330873478|gb|EGH07627.1| cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K
[Pseudomonas syringae pv. morsprunorum str. M302280]
Length = 325
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 153/286 (53%), Gaps = 26/286 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 LSNGCVCCTIYTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+
Sbjct: 123 RYILDGIITLVDAAHADTHLAQTI-------AQAQIGFADRLLVSKRDLVDDAAFDALSA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L V G++L + D T + G
Sbjct: 176 RLTRINRRAPIRIVEHGKIDLAELLDVRGFNL-------NADLGGGMTLRPLAPAGKSSD 228
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
++S+ + S+ L+LD + +++ L+E+ G+ L R KG+L++ ++ VF
Sbjct: 229 R---------ITSLVLRSDKPLNLDRLSEFMNELLEDHGKQLLRYKGVLNIEDEPRKMVF 279
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QGV W E R + +VFI L E +R GF+ A
Sbjct: 280 QGVLKLYGFDWDTEWAEGEPRESVIVFIADELPEEKIRAGFEKVCA 325
>gi|332814166|ref|XP_003309243.1| PREDICTED: COBW domain-containing protein 2-like isoform 1 [Pan
troglodytes]
Length = 395
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 158/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+VR + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVRDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL + KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTQEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 326 SQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLIGRNLDKDILKQLF 373
>gi|410267860|gb|JAA21896.1| COBW domain containing 1 [Pan troglodytes]
Length = 359
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 158/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+VR + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 67 LRNGCLCCSVRDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL + KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 126 LDGIITIVDSKYGLKHLTQEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIR 185
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 186 SINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 230
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 231 QPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 289
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 290 SQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLIGRNLDKDILKQLF 337
>gi|115265651|dbj|BAF32912.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. phaseolicola]
Length = 332
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 154/282 (54%), Gaps = 26/282 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 70 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 129
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+
Sbjct: 130 RYILDGIITLVDAAHADTHLAQTI-------AQAQIGFADRLLVSKRDLVDDATFDALSA 182
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G++D+ +L V G++L + D + G+
Sbjct: 183 RLTRINRRAPIRIVEHGNIDLAELLDVRGFNL-------NADLGGGMILRPLAPVGN--- 232
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
++S+ + SE L+LD + +++ L+E+ G+ L R KG+L++ ++ VF
Sbjct: 233 ------SGDRITSLVLRSEKPLNLDRLSEFMNELLEDHGKQLLRYKGVLNIKDEPRKMVF 286
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W EKR + +VFI L E +R GF+
Sbjct: 287 QGVLKLYGFDWDTEWAEGEKRESVIVFIADELPEEKIRAGFE 328
>gi|257482144|ref|ZP_05636185.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|422682048|ref|ZP_16740315.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|331011389|gb|EGH91445.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
Length = 325
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 154/282 (54%), Gaps = 26/282 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+
Sbjct: 123 RYILDGIITLVDAAHADTHLAQTI-------AQAQIGFADRLLVSKRDLVDDATFDALSA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G++D+ +L V G++L + D + G+
Sbjct: 176 RLTRINRRAPIRIVEHGNIDLAELLDVRGFNL-------NADLGGGMILRPLAPVGN--- 225
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
++S+ + SE L+LD + +++ L+E+ G+ L R KG+L++ ++ VF
Sbjct: 226 ------SGDRITSLVLRSEKPLNLDRLSEFMNELLEDHGKQLLRYKGVLNIEDEPRKMVF 279
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W EKR + +VFI L E +R GF+
Sbjct: 280 QGVLKLYGFDWDTEWAEGEKRESVIVFIADELPEEKIRAGFE 321
>gi|410297202|gb|JAA27201.1| COBW domain containing 2 [Pan troglodytes]
gi|410297206|gb|JAA27203.1| COBW domain containing 2 [Pan troglodytes]
Length = 395
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 158/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+VR + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVRDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL + KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTQEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 326 SQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLIGRNLDKDILKQLF 373
>gi|28871768|ref|NP_794387.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. tomato str. DC3000]
gi|422660301|ref|ZP_16722715.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. lachrymans str. M302278]
gi|28855020|gb|AAO58082.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. tomato str. DC3000]
gi|331018908|gb|EGH98964.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. lachrymans str. M302278]
Length = 325
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 152/285 (53%), Gaps = 26/285 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+
Sbjct: 123 RYILDGIITLVDAAHADTHLTQTI-------AQAQIGFADRLLVSKRDLVDDAAFDALSA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L V G++L + D T + G
Sbjct: 176 RLTRINRRAPIRIVEHGKIDLAELLDVRGFNL-------NADLGGSMTLRPLAPAGKSSD 228
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
++S+ + S+ L+LD + +++ L+E+ G+ L R KG+L++ ++ VF
Sbjct: 229 R---------ITSLVLRSDKPLNLDRLSEFMNELLEDHGKQLLRYKGVLNIEDEPRKMVF 279
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGV W E R + +VFI L E +R GF +
Sbjct: 280 QGVLKLYGFDWDTEWAEGELRESVIVFIADELPEEKIRAGFAAVV 324
>gi|404401110|ref|ZP_10992694.1| cobalamin synthesis protein/P47K [Pseudomonas fuscovaginae UPB0736]
Length = 323
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 153/281 (54%), Gaps = 27/281 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 61 LSNGCVCCTIHTDLTKALYLLLERLDSGEISFDRLVIECTGLADPAPVAQTFFIDEELRE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV +L+E
Sbjct: 121 RYLLDGIITLVDAAHAEHHLTQTI-------AQAQIGFADRLLVSKRDLVDAATFDALSE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L V G++L N+ G
Sbjct: 174 RLTRINRRAPIRVVEHGHIDLAELLDVRGFNL----------NADLGGGVSLRPVSQGRG 223
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+SS+ + ++ LD+D + +++ L+E+ G+ L R KG+L+++G ++ VF
Sbjct: 224 IDR-------ISSLVLRTDQPLDIDRLSEFMNELLEDHGKQLLRYKGVLNIAGESRRLVF 276
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W R + +VFI +L E ++R+GF
Sbjct: 277 QGVLKLYGFDWDTEWEEGAVRESVIVFIADDLPEESIREGF 317
>gi|71734480|ref|YP_276445.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|71555033|gb|AAZ34244.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. phaseolicola 1448A]
Length = 325
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 154/282 (54%), Gaps = 26/282 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+
Sbjct: 123 RYILDGIITLVDAAHADTHLAQTI-------AQAQIGFADRLLVSKRDLVDDATFDALSA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G++D+ +L V G++L + D + G+
Sbjct: 176 RLTRINRRAPIRIVEHGNIDLAELLDVRGFNL-------NADLGGGMILRPLAPVGN--- 225
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
++S+ + SE L+LD + +++ L+E+ G+ L R KG+L++ ++ VF
Sbjct: 226 ------SGDRITSLVLRSEKPLNLDRLSEFMNELLEDHGKQLLRYKGVLNIKDEPRKMVF 279
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W EKR + +VFI L E +R GF+
Sbjct: 280 QGVLKLYGFDWDTEWAEGEKRESVIVFIADELPEEKIRAGFE 321
>gi|238920678|ref|YP_002934193.1| CobW/P47K family protein [Edwardsiella ictaluri 93-146]
gi|238870247|gb|ACR69958.1| CobW/P47K family protein [Edwardsiella ictaluri 93-146]
Length = 366
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 152/291 (52%), Gaps = 27/291 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQG--QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGCLCC+VRG+ L L A+++ G QF+HI+IE+TGLA PAP+++TF + +
Sbjct: 62 LSNGCLCCSVRGEFSAALSDLLAQRRAGRLQFEHIIIESTGLADPAPIVQTFFVEPALRD 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
++LD VI L D +H + L+E P A Q+ +ADRI+L K D V +T+ ++
Sbjct: 122 ALRLDAVIALADCQHLTRQLDE-HP-----VAAAQLGFADRILLTKADRVDDTQREAVIA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
RI+ IN+ A + L ++G L + + L D H T H +A
Sbjct: 176 RIRRINSRAGLYLVEHGICPAALWLDLHAFTLS--DDLSLSRGLHIVTAHAAAAPRFQP- 232
Query: 179 HHHNHMHDSAVSSVTIVSE---------GTLDLDEVDDWLERLIEEKGEDLYRMKGILSV 229
+AV+ T V + G LDL + ++ER +E G D+ R KGIL++
Sbjct: 233 ------FRTAVAPATAVDDAIQAHLLEGGELDLQRIGAFMERCVECHGNDMLRYKGILAI 286
Query: 230 SGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
+ + V QG+H + G W P E R ++LV IGR+L L+ GF
Sbjct: 287 AEQPCRLVVQGIHRVVGFDYGSPWSPGEPRRSQLVIIGRHLPIATLQVGFN 337
>gi|422300133|ref|ZP_16387667.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
avellanae BPIC 631]
gi|422653683|ref|ZP_16716444.1| cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K
[Pseudomonas syringae pv. actinidiae str. M302091]
gi|115265597|dbj|BAF32859.1| cobalamin synthesis protein [Pseudomonas syringae pv. actinidiae]
gi|330966727|gb|EGH66987.1| cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K
[Pseudomonas syringae pv. actinidiae str. M302091]
gi|407987768|gb|EKG30480.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
avellanae BPIC 631]
Length = 325
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 153/286 (53%), Gaps = 26/286 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+
Sbjct: 123 RYILDGIITLVDAAHADTHLAQTI-------AQAQIGFADRLLVSKRDLVDDAAFDALSA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G +D+ +L V G++L + D T + G
Sbjct: 176 RLTRINRRAPIRIVEHGKIDLAELLDVRGFNL-------NADLGGGMTLRPLAPAGKSSD 228
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
++S+ + S+ L+LD + +++ L+E+ G+ L R KG+L++ ++ VF
Sbjct: 229 R---------ITSLVLRSDKPLNLDRLSEFMNELLEDHGKQLLRYKGVLNIEDEPRKMVF 279
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QGV W E R + +VFI L E +R GF+ A
Sbjct: 280 QGVLKLYGFDWDTEWAEGEPRESVIVFIADELPEEKIRAGFEKVCA 325
>gi|421083084|ref|ZP_15543963.1| Putative GTP-binding protein YjiA [Pectobacterium wasabiae CFBP
3304]
gi|401702310|gb|EJS92554.1| Putative GTP-binding protein YjiA [Pectobacterium wasabiae CFBP
3304]
Length = 328
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 152/282 (53%), Gaps = 31/282 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT +L LL L FDH++IE TG+A P PV +TF + E++ +
Sbjct: 69 LSNGCICCTQSNELADALLDLIDGVDNGTLDFDHVIIECTGMADPGPVAQTFFSHEVICE 128
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA Q L++ F + ++ Q+ YADRI+L K D+ +E E +L
Sbjct: 129 RFVLDGIITLVDAVHAQQQLDQ----FTIAQS--QIGYADRILLTKTDVASEDE--TLLP 180
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDL-ERIDSEVHVDNSHCATHHHESAHGHHE 177
R++ INA AP+ +G +D+ + + G+ L +++D + V T ++
Sbjct: 181 RLQRINARAPIYPVVHGDIDLSVLFNIDGFVLSDKLDVKTPVFRFVAPTQNN-------- 232
Query: 178 GHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYV 237
V S+ + + ++L V D +E L+ + ++L R KGIL+++ ++ +
Sbjct: 233 -----------VQSIVVYLDKAVELQAVSDVMENLLLQFSDNLLRYKGILAINADNRRLL 281
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
FQGV + W DE+R + LVFIG +L E +R F
Sbjct: 282 FQGVQRLYSADWDREWQVDEERKSVLVFIGVDLPEQEIRNAF 323
>gi|421899564|ref|ZP_16329927.1| cobalamin synthesis protein [Ralstonia solanacearum MolK2]
gi|206590770|emb|CAQ56382.1| cobalamin synthesis protein [Ralstonia solanacearum MolK2]
Length = 366
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 163/315 (51%), Gaps = 42/315 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKK---QGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL+ L L ++ + QFD +VIETTG+A P PV +TF D+ ++
Sbjct: 62 MSNGCICCTIRGDLLTALSDLVSRRDKGELQFDRVVIETTGVANPGPVAQTFFMDDEIAG 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD V+TLVD+KH Q L++ + EA QV +AD I + K DLV+ ++ +L
Sbjct: 122 RYLLDAVVTLVDAKHGNQQLDKQE------EAQRQVGFADAIFITKGDLVSSADVDALRH 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSH--------------- 163
R+ H+N AP++ A +G +D + + G++L ++++ +D
Sbjct: 176 RLLHMNPRAPIRTASFGDTPIDTIFDLRGFNL---NAKLEIDPDFLREDGHDHDHDHDHD 232
Query: 164 ----CAT----------HHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWL 209
CA H H HH + H ++S SE + +++++L
Sbjct: 233 HDHACAPGCDHDHDHDHDHDHDHGHGHHHHHGHAHHTDRIASFVFRSERPFNYTKLEEFL 292
Query: 210 ERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRN 269
++ GE L R KG+L + G +++ VFQGVH + G W E N++VFIG +
Sbjct: 293 SGVLNVYGEKLLRYKGVLYMEGVDRKVVFQGVHQLMGSDVGGKWD-SETPGNRMVFIGVD 351
Query: 270 LDETALRKGFKGCLA 284
L + KG + CLA
Sbjct: 352 LPRDTILKGLENCLA 366
>gi|34596564|gb|AAQ76870.1| COBW domain containing protein 3 [Homo sapiens]
Length = 395
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 158/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 326 SQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLIGRNLDKDILKQLF 373
>gi|340382605|ref|XP_003389809.1| PREDICTED: COBW domain-containing protein 1-like [Amphimedon
queenslandica]
Length = 382
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 155/277 (55%), Gaps = 29/277 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+VR VK + L + K G+FD+I++ETTGLA P P+ F D+ + +
Sbjct: 99 LRNGCLCCSVRDAGVKAIENLMEYK-GKFDYILLETTGLADPGPIASIFWLDDGLGSSLI 157
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG++T+VD+K+ + L+EVK +NEA+ Q+ AD II+NK DL+ + E+ ++ +RI+
Sbjct: 158 LDGIVTVVDAKYIHKQLDEVKGDGSINEAIRQIGLADVIIINKCDLINDDEISTVIQRIR 217
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHES---AHGHHEG 178
IN+MA V++D +L + +C T +S + +
Sbjct: 218 SINSMANFIQTIRSKVNLDDILDI-----------------NCYTTSDKSIGKIELYSQS 260
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVS 230
+ D +V++VT G+++ +++++WL+ L+ EK ++ RMKG+L +
Sbjct: 261 TTDQYHIDKSVNTVTFEVIGSINENKLEEWLQELLWEKSIKNKNGKEMNIMRMKGLLCIE 320
Query: 231 GSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIG 267
S + + Q V+ + P W +E+++N+LVFIG
Sbjct: 321 SSPVKVILQCVNELYELIPTSGWEENEEQLNRLVFIG 357
>gi|416024621|ref|ZP_11568682.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422403284|ref|ZP_16480342.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. glycinea str. race 4]
gi|320330594|gb|EFW86573.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330873448|gb|EGH07597.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. glycinea str. race 4]
Length = 325
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 154/282 (54%), Gaps = 26/282 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+
Sbjct: 123 RYILDGIITLVDAAHADTHLAQTI-------AQAQIGFADRLLVSKRDLVDDATFDALSA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G++D+ +L V G++L + D + G+
Sbjct: 176 RLTRINRRAPIRIVEHGNIDLAELLDVRGFNL-------NADLGGGMILRPLALVGN--- 225
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
++S+ + SE L+LD + +++ L+E+ G+ L R KG+L++ ++ VF
Sbjct: 226 ------SGDRITSLVLRSEKPLNLDRLSEFMNELLEDHGKQLLRYKGVLNIEDEPRKMVF 279
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W EKR + +VFI L E +R GF+
Sbjct: 280 QGVLKLYGFDWDTEWAEGEKRESVIVFIADELPEEKIRAGFE 321
>gi|34596568|gb|AAQ76872.1| COBW domain containing protein [Gorilla gorilla]
Length = 395
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 158/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+VR + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVRDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDVSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV +GRNLD+ L++ F
Sbjct: 326 SQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLLGRNLDKDILKQLF 373
>gi|13177623|gb|AAF68990.2| dopamine-responsive protein [Homo sapiens]
Length = 395
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 158/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV +GRNLD+ L++ F
Sbjct: 326 SQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLLGRNLDKDILKQLF 373
>gi|410922862|ref|XP_003974901.1| PREDICTED: COBW domain-containing protein 2-like [Takifugu
rubripes]
Length = 370
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 159/290 (54%), Gaps = 32/290 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
++NGCLCC+V+ + +K + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 90 LSNGCLCCSVKDNGLKAIENLMEKK-GKFDYILLETTGLADPGAVASMFWVDAELGSEIY 148
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT++D+K+ +Q LNE K +VNEA Q+A AD I+NK DLV E EL + ++
Sbjct: 149 LDGIITVIDAKYGLQQLNEEKADGLVNEAARQIAVADLTIINKTDLVNEEELAQIRAAVR 208
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHH--ESAHGHHEGH 179
IN + + + VD+ VL + +D H D ++ A ++ H
Sbjct: 209 SINGLVKIIETQKSKVDLSEVLDLHSFD--------HKDGANLAEKLQLVKATKPH---- 256
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK------GEDL--YRMKGILSVSG 231
D ++ +VT G + D ++ +++ L+ EK G+ + R KGI++ G
Sbjct: 257 -----LDKSILTVTFEVAGEILEDTLNVFIQDLLWEKMFKNKEGQPMTVIRSKGIVAFPG 311
Query: 232 SEQQYVFQGVHS--TLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
Q + QGVH L+ P + WG D RIN+LVFIG+NLD+ L + F
Sbjct: 312 KAHQVMLQGVHELYELNEMP-QLWG-DNPRINRLVFIGKNLDKDILEERF 359
>gi|410978061|ref|XP_003995415.1| PREDICTED: COBW domain-containing protein 2 isoform 1 [Felis catus]
Length = 432
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 158/288 (54%), Gaps = 27/288 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 140 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGVDIY 198
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD II+NK DL++E +L L I+
Sbjct: 199 LDGIITVVDSKYGLKHLEEEKPDGLINEASRQVALADIIIINKTDLISEEDLKKLRTTIR 258
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + VD+ VL DL DS + + H + H
Sbjct: 259 SINGLGKILETQRSRVDLSNVL-----DLHAFDSLSGI-SLQKKLQHVPTTQPH------ 306
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
D +V +VT G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 307 ---LDQSVLTVTFEVPGNAKEESLNVFIQNLLWEKNVRNKDGDCMEVIRLKGLVSIKDKL 363
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
+Q + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 364 KQVIVQGVHELYDLEETP-LSWKDDTERTNRLVLIGRNLDKEILKQLF 410
>gi|403289072|ref|XP_003935692.1| PREDICTED: COBW domain-containing protein 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 395
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 156/288 (54%), Gaps = 27/288 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + +K + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLKAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRATIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G ++++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFEVPGNAKEEQLNVFIQNLLWEKTVRNKDNHCMEVIRLKGLVSIKDR 325
Query: 233 EQQYVFQGVHSTLD-GCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH D W + +R N+LV IGRNLD+ L++ F
Sbjct: 326 RQQVIVQGVHELYDLEVTPVCWKDETERTNRLVLIGRNLDKDILKQLF 373
>gi|398846439|ref|ZP_10603415.1| putative GTPase, G3E family [Pseudomonas sp. GM84]
gi|398252569|gb|EJN37750.1| putative GTPase, G3E family [Pseudomonas sp. GM84]
Length = 325
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 151/286 (52%), Gaps = 25/286 (8%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC++ GDL + L L L + G+ FD +VIE TGLA PAPV +TF +E +
Sbjct: 61 LANGCVCCSIHGDLTRALYLLLERLDAGEIAFDRLVIECTGLADPAPVAQTFFIEEELRD 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A QV +ADR++L+K DLV + +L
Sbjct: 121 RYILDGIITLVDAAHAEVHLTQAI-------AQAQVGFADRLLLSKTDLVEPAAVEALQA 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN A +++ ++G +D+ +L V G++L N + + +
Sbjct: 174 RLARINGRASIRVVEHGRIDLAELLDVRGFNL----------NPDLGANLKPTLRPLLKP 223
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+ +S++ + +E LD+D + D++ L+E G+ L R KG+L+++G ++ VF
Sbjct: 224 ATPDR-----ISTLVLRTETPLDIDRLSDFMNDLLETHGKQLLRYKGVLNIAGEARRLVF 278
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QGV W E R + +VFI L E +R GF+ A
Sbjct: 279 QGVLKLYGFDWDAEWAEGEARESVMVFIADELPEARIRAGFEALAA 324
>gi|168003776|ref|XP_001754588.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694209|gb|EDQ80558.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 369
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 151/273 (55%), Gaps = 29/273 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGC+CC+V+ V+ L QL ++++ +FDHI++ETTGLA P PV D+ + V
Sbjct: 117 LGNGCVCCSVKHSFVQALEQLLERRE-KFDHILLETTGLANPGPVAAVLWVDDQLESPVH 175
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVT--ETELGSLTER 119
LD ++T+VD+++ Q L + + VNEA Q+A+AD ++LNK+DLV+ E+ L R
Sbjct: 176 LDSIVTVVDARNLKQQLADTRETGAVNEAYLQIAFADVVLLNKVDLVSGGMVEVEDLEAR 235
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGY---DLERIDSEVHVDNSHCATHHHESAHGHH 176
I +IN + + + VD+ V Y L ++ + +D
Sbjct: 236 IHNINGLVKIVRSVRCQVDLKDVFERRAYKSQQLMNVERLLQLD---------------- 279
Query: 177 EGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGED--LYRMKGILSVSGSEQ 234
+HD V +V+ T +LD+V+DWL L+ E G+D +YRMKG+L++ GS+
Sbjct: 280 ----ERDVHDRMVGTVSFSLSETANLDKVNDWLGELLWEGGKDFEIYRMKGVLNIDGSDT 335
Query: 235 QYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIG 267
++ Q V + P ++W DEKR + +VFIG
Sbjct: 336 MHMLQAVRDLYEIVPTRSWRSDEKRTH-IVFIG 367
>gi|188590933|ref|YP_001795533.1| hypothetical protein RALTA_A0138 [Cupriavidus taiwanensis LMG
19424]
gi|170937827|emb|CAP62811.1| conserved hypothetical protein, similar to E. coli yjiA and
P.chlororaphis P47K [Cupriavidus taiwanensis LMG 19424]
Length = 365
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 164/311 (52%), Gaps = 35/311 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDLV+ L L ++ +FD +VIETTG+A P PV +TF DE ++
Sbjct: 62 MSNGCICCTIRGDLVQALSTLLTRRDAGEIEFDRVVIETTGVANPGPVAQTFFMDEEIAS 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD VITLVD+KHA L++ + EA QV +AD I + K DLV E ++ L
Sbjct: 122 RYLLDAVITLVDAKHAHLQLDKQE------EAQRQVGFADAIFITKSDLVGEGDVAELRH 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEVHV---------------- 159
R+ H+N AP++ +G +D + + G++L ID E
Sbjct: 176 RLLHMNPRAPIRQVNFGEAPIDAIFDLRGFNLNAKLEIDPEFLRAEEHDHAHDHEHDHEH 235
Query: 160 ------DNSHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLI 213
D H H H AHGH HHH+H H ++S S+ +++++L ++
Sbjct: 236 GDHCGNDCGHDHDHDHGHAHGHAHDHHHHHHHTDRIASFVFRSDKPFHYGKLEEFLSGIL 295
Query: 214 EEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDET 273
GE L R KG+L + G +++ VFQGVH + G W DE ++VFIG +L
Sbjct: 296 AVYGEKLLRYKGVLYMEGVDRKVVFQGVHQLMGSDIGAKW-EDETPGTRMVFIGVDLPRD 354
Query: 274 ALRKGFKGCLA 284
A+ KG + CLA
Sbjct: 355 AILKGLENCLA 365
>gi|410227932|gb|JAA11185.1| COBW domain containing 2 [Pan troglodytes]
Length = 395
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 158/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+VR + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVRDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL + KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTQEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV +GRNLD+ L++ F
Sbjct: 326 SQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLLGRNLDKDILKQLF 373
>gi|348680297|gb|EGZ20113.1| hypothetical protein PHYSODRAFT_246028 [Phytophthora sojae]
Length = 382
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 164/305 (53%), Gaps = 31/305 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
++NGC+CC+VR DLV L +L +++ +FD+I++ETTG+A P V F D+ + +
Sbjct: 82 LSNGCVCCSVRSDLVNTLEKLLERRD-RFDYILVETTGMADPGKVASIFWVDDELEGRIF 140
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETE-LGSLTERI 120
LDG++TLVD+ HL+ + EA Q+AYADRI+LNK DLV + + + +R+
Sbjct: 141 LDGIVTLVDAPRLDFHLDHPDTQ---REAAAQLAYADRILLNKGDLVQDKDRRREIEQRV 197
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDL---ERIDSEVHVDNSHCATHHHESAHGHHE 177
+N +A V + VD+D +L + + E+++ E+H H HE + H
Sbjct: 198 SQVNGVASVHWTERSRVDLDDILNIKSFTTSRAEQVEKELHSLLYAGEEHDHEKCNDEHH 257
Query: 178 GH--HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGED-----------LYRMK 224
H H M + V + +G LD D+++ WL L+ E+ +D L+R+K
Sbjct: 258 DHTTHTGGMQTTCVR----IRDGPLDHDKLERWLGELLWEQEDDEIKDAAAKHQKLFRVK 313
Query: 225 GILSVSGSEQQYVFQGVHSTLD-GCPGKAWGPD-----EKRINKLVFIGRNLDETALRKG 278
G+++VSG +++ Q VH + + W D E R+ ++VFIG +L + L G
Sbjct: 314 GVVAVSGEPNKFILQAVHELFEVYASEERWTEDELSVMEGRVTQVVFIGLHLRKNELEAG 373
Query: 279 FKGCL 283
+ C+
Sbjct: 374 LRSCV 378
>gi|302565296|ref|NP_001180882.1| COBW domain-containing protein 5 [Macaca mulatta]
gi|380812940|gb|AFE78344.1| COBW domain-containing protein 3 [Macaca mulatta]
gi|383408603|gb|AFH27515.1| COBW domain-containing protein 3 [Macaca mulatta]
Length = 395
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 158/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRMTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFEVPGNAKEEHLNIFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 326 PQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLIGRNLDKDILKQLF 373
>gi|33469141|ref|NP_742000.1| COBW domain-containing protein 2 [Homo sapiens]
gi|74714301|sp|Q8IUF1.1|CBWD2_HUMAN RecName: Full=COBW domain-containing protein 2; AltName:
Full=Cobalamin synthase W domain-containing protein 2
gi|24850426|gb|AAN64907.1| COBW domain-containing protein [Homo sapiens]
gi|34596560|gb|AAQ76868.1| COBW domain containing protein 2 [Homo sapiens]
gi|111306485|gb|AAI20993.1| COBW domain containing 2 [Homo sapiens]
gi|158261167|dbj|BAF82761.1| unnamed protein product [Homo sapiens]
Length = 395
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 158/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLAEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRATIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV +GRNLD+ L++ F
Sbjct: 326 SQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLLGRNLDKDILKQLF 373
>gi|58332214|ref|NP_001011255.1| COBW domain containing 2 [Xenopus (Silurana) tropicalis]
gi|55778678|gb|AAH86500.1| hypothetical LOC496702 [Xenopus (Silurana) tropicalis]
Length = 362
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 159/290 (54%), Gaps = 32/290 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + +K + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 87 LRNGCLCCSVKDNGLKAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 145
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG++++VD+K+A++HL E KP ++NEA QVA AD +I+NK DLV E EL ++ +
Sbjct: 146 LDGIVSVVDAKYALKHLQEEKPESLINEAARQVALADVLIINKTDLVAEEELDAVRSTVS 205
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + V++ +L + +D S G +
Sbjct: 206 SINGLVKILETQRARVNLMDILDLHAFD-------------------SLSGKGFQDKLVA 246
Query: 182 NHMH---DSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGE--------DLYRMKGILSVS 230
+ +H D ++ +VT G++ + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 247 SAVHPHLDKSIVTVTFEVLGSITEENLNLFVQNLLWEKNVINRIGHPIEVIRLKGLVSIK 306
Query: 231 GSEQQYVFQGVHSTLDGCPGK-AWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH D + W + RIN+LVFIGR+LD+ L++ F
Sbjct: 307 DKPQQVILQGVHELYDLEETQMTWQDNGDRINRLVFIGRHLDKETLKQLF 356
>gi|355753390|gb|EHH57436.1| Cobalamin synthase W domain-containing protein 3 [Macaca
fascicularis]
Length = 395
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 158/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRMTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFEVPGNAKEEHLNIFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 326 PQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLIGRNLDKDILKQLF 373
>gi|113866226|ref|YP_724715.1| G3E family GTPase [Ralstonia eutropha H16]
gi|113525002|emb|CAJ91347.1| Putative GTPase (G3E family) [Ralstonia eutropha H16]
Length = 366
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 165/312 (52%), Gaps = 36/312 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDLV+ L L ++ FD +VIETTG+A P PV +TF DE ++
Sbjct: 62 MSNGCICCTIRGDLVQALSTLLTRRDAGEIDFDRVVIETTGVANPGPVAQTFFMDEEIAS 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD VITLVD+KHA L++ + EA QV +AD I + K DLVTE ++ L
Sbjct: 122 RYLLDAVITLVDAKHAHLQLDKQE------EAQRQVGFADAIFITKSDLVTEADVAELRH 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE---RIDSEVHVDNSHCATHHHESAHGH 175
R+ H+N AP++L +G +D + + G++L ID E + H H HE HG
Sbjct: 176 RLLHMNPRAPIRLVNFGEAPIDTIFDLRGFNLNAKLEIDPEFLRADDHDHDHDHEHEHGE 235
Query: 176 HEG-----------------------HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERL 212
H G HHH+H H ++S S+ +++++L +
Sbjct: 236 HCGDDCGHDHGHDHAHGHGHAHDHHHHHHHHHHTDRIASFVFRSDKPFHYGKLEEFLSGI 295
Query: 213 IEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDE 272
+ GE L R KG+L + G +++ VF GVH + G W +E ++VFIG +L
Sbjct: 296 LAVYGEKLLRYKGVLYMDGVDRKVVFHGVHQLMGSDIGAKW-EEETPGTRMVFIGVDLPR 354
Query: 273 TALRKGFKGCLA 284
A+ KG + CLA
Sbjct: 355 DAILKGLENCLA 366
>gi|126722884|ref|NP_060961.3| COBW domain-containing protein 1 isoform 1 [Homo sapiens]
gi|74752288|sp|Q9BRT8.1|CBWD1_HUMAN RecName: Full=COBW domain-containing protein 1; AltName:
Full=Cobalamin synthase W domain-containing protein 1;
Short=COBP; AltName: Full=NPC-A-6 COBW domain-containing
protein 1; Short=NPC-A-6
gi|13543692|gb|AAH05996.1| COBW domain containing 1 [Homo sapiens]
gi|15488579|gb|AAH13432.1| COBW domain containing 1 [Homo sapiens]
gi|164691127|dbj|BAF98746.1| unnamed protein product [Homo sapiens]
gi|325463147|gb|ADZ15344.1| COBW domain containing 1 [synthetic construct]
Length = 395
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 157/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDSGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV +GRNLD+ L++ F
Sbjct: 326 SQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLLGRNLDKDILKQLF 373
>gi|254238653|ref|ZP_04931976.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126170584|gb|EAZ56095.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
Length = 319
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 155/282 (54%), Gaps = 24/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CC++ DL K L L L ++ G+ FD +VIE TGLA PAPV +TF DE + Q
Sbjct: 53 LSNGCVCCSINTDLEKALFLLLERRDNGEIDFDRLVIECTGLADPAPVAQTFFADEELCQ 112
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ +A +HL E A QV +ADRI+++K DLV +L +
Sbjct: 113 RYVLDGIITLVDAANAERHLQETI-------AQAQVGFADRILVSKTDLVDAATFEALGQ 165
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ IN A V + ++G +D+ +L V G++L + D A +
Sbjct: 166 RLQRINRRALVHVVEHGRIDLAHLLDVRGFNL-------NADLGPGIGLRPLRAVAAKDS 218
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+ ++ + S+ LDL+ + ++++ L++ G L R KG+L+++ ++ VF
Sbjct: 219 RDR-------IGTLVLRSDTPLDLERLSEFMDDLLQWHGNSLLRYKGVLNIADEPRRLVF 271
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W DE R + +VFIG NL E ++R+GF+
Sbjct: 272 QGVLRLYGFDWDSEWRDDEARESVIVFIGDNLPEDSIREGFE 313
>gi|223941776|ref|NP_001138827.1| COBW domain-containing protein 1 isoform 2 [Homo sapiens]
gi|31417620|gb|AAH09573.1| CBWD1 protein [Homo sapiens]
gi|158254728|dbj|BAF83337.1| unnamed protein product [Homo sapiens]
gi|312151174|gb|ADQ32099.1| COBW domain containing 1 [synthetic construct]
Length = 359
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 157/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 67 LRNGCLCCSVKDSGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 126 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIR 185
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 186 SINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 230
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 231 QPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 289
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV +GRNLD+ L++ F
Sbjct: 290 SQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLLGRNLDKDILKQLF 337
>gi|15599800|ref|NP_253294.1| hypothetical protein PA4604 [Pseudomonas aeruginosa PAO1]
gi|107099732|ref|ZP_01363650.1| hypothetical protein PaerPA_01000750 [Pseudomonas aeruginosa PACS2]
gi|218893701|ref|YP_002442570.1| putative cobalamin synthesis protein/P47K family protein
[Pseudomonas aeruginosa LESB58]
gi|254244502|ref|ZP_04937824.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|313107256|ref|ZP_07793452.1| putative cobalamin synthesis protein/P47K family protein
[Pseudomonas aeruginosa 39016]
gi|386060758|ref|YP_005977280.1| putative cobalamin synthesis protein/P47K family protein
[Pseudomonas aeruginosa M18]
gi|386063945|ref|YP_005979249.1| hypothetical protein NCGM2_0988 [Pseudomonas aeruginosa NCGM2.S1]
gi|392986269|ref|YP_006484856.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
aeruginosa DK2]
gi|416859433|ref|ZP_11913859.1| putative cobalamin synthesis protein/P47K family protein
[Pseudomonas aeruginosa 138244]
gi|418584077|ref|ZP_13148142.1| putative cobalamin synthesis protein/P47K family protein
[Pseudomonas aeruginosa MPAO1/P1]
gi|418592124|ref|ZP_13156001.1| putative cobalamin synthesis protein/P47K family protein
[Pseudomonas aeruginosa MPAO1/P2]
gi|419752151|ref|ZP_14278560.1| putative cobalamin synthesis protein/P47K family protein
[Pseudomonas aeruginosa PADK2_CF510]
gi|420142560|ref|ZP_14650153.1| hypothetical protein PACIG1_5671 [Pseudomonas aeruginosa CIG1]
gi|421156026|ref|ZP_15615484.1| hypothetical protein PABE171_4857 [Pseudomonas aeruginosa ATCC
14886]
gi|421162979|ref|ZP_15621767.1| hypothetical protein PABE173_5298 [Pseudomonas aeruginosa ATCC
25324]
gi|421170379|ref|ZP_15628337.1| hypothetical protein PABE177_5117 [Pseudomonas aeruginosa ATCC
700888]
gi|421182666|ref|ZP_15640139.1| hypothetical protein PAE2_4619 [Pseudomonas aeruginosa E2]
gi|421519160|ref|ZP_15965832.1| hypothetical protein A161_22903 [Pseudomonas aeruginosa PAO579]
gi|424944625|ref|ZP_18360388.1| putative cobalamin synthesis protein/P47K family protein
[Pseudomonas aeruginosa NCMG1179]
gi|451983162|ref|ZP_21931457.1| COG0523: Putative GTPases (G3E family) [Pseudomonas aeruginosa 18A]
gi|9950854|gb|AAG07992.1|AE004874_5 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|126197880|gb|EAZ61943.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218773929|emb|CAW29743.1| putative cobalamin synthesis protein/P47K family protein
[Pseudomonas aeruginosa LESB58]
gi|310879954|gb|EFQ38548.1| putative cobalamin synthesis protein/P47K family protein
[Pseudomonas aeruginosa 39016]
gi|334838426|gb|EGM17147.1| putative cobalamin synthesis protein/P47K family protein
[Pseudomonas aeruginosa 138244]
gi|346061071|dbj|GAA20954.1| putative cobalamin synthesis protein/P47K family protein
[Pseudomonas aeruginosa NCMG1179]
gi|347307064|gb|AEO77178.1| putative cobalamin synthesis protein/P47K family protein
[Pseudomonas aeruginosa M18]
gi|348032504|dbj|BAK87864.1| hypothetical protein NCGM2_0988 [Pseudomonas aeruginosa NCGM2.S1]
gi|375046206|gb|EHS38771.1| putative cobalamin synthesis protein/P47K family protein
[Pseudomonas aeruginosa MPAO1/P1]
gi|375049036|gb|EHS41546.1| putative cobalamin synthesis protein/P47K family protein
[Pseudomonas aeruginosa MPAO1/P2]
gi|384401728|gb|EIE48082.1| putative cobalamin synthesis protein/P47K family protein
[Pseudomonas aeruginosa PADK2_CF510]
gi|392321774|gb|AFM67154.1| putative cobalamin synthesis protein/P47K family protein
[Pseudomonas aeruginosa DK2]
gi|403244666|gb|EJY58529.1| hypothetical protein PACIG1_5671 [Pseudomonas aeruginosa CIG1]
gi|404346145|gb|EJZ72496.1| hypothetical protein A161_22903 [Pseudomonas aeruginosa PAO579]
gi|404519524|gb|EKA30263.1| hypothetical protein PABE171_4857 [Pseudomonas aeruginosa ATCC
14886]
gi|404523665|gb|EKA34071.1| hypothetical protein PABE177_5117 [Pseudomonas aeruginosa ATCC
700888]
gi|404532426|gb|EKA42313.1| hypothetical protein PABE173_5298 [Pseudomonas aeruginosa ATCC
25324]
gi|404541609|gb|EKA50962.1| hypothetical protein PAE2_4619 [Pseudomonas aeruginosa E2]
gi|451759296|emb|CCQ83980.1| COG0523: Putative GTPases (G3E family) [Pseudomonas aeruginosa 18A]
gi|453046057|gb|EME93774.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
aeruginosa PA21_ST175]
Length = 334
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 155/282 (54%), Gaps = 24/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CC++ DL K L L L ++ G+ FD +VIE TGLA PAPV +TF DE + Q
Sbjct: 68 LSNGCVCCSINTDLEKALFLLLERRDNGEIDFDRLVIECTGLADPAPVAQTFFADEELCQ 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ +A +HL E A QV +ADRI+++K DLV +L +
Sbjct: 128 RYVLDGIITLVDAANAERHLQETI-------AQAQVGFADRILVSKTDLVDAATFEALGQ 180
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ IN A V + ++G +D+ +L V G++L + D A +
Sbjct: 181 RLQRINRRALVHVVEHGRIDLAHLLDVRGFNL-------NADLGPGIGLRPLRAVAAKDS 233
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+ ++ + S+ LDL+ + ++++ L++ G L R KG+L+++ ++ VF
Sbjct: 234 RDR-------IGTLVLRSDTPLDLERLSEFMDDLLQWHGNSLLRYKGVLNIADEPRRLVF 286
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W DE R + +VFIG NL E ++R+GF+
Sbjct: 287 QGVLRLYGFDWDSEWRDDEARESVIVFIGDNLPEDSIREGFE 328
>gi|422597258|ref|ZP_16671533.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|330987550|gb|EGH85653.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. lachrymans str. M301315]
Length = 325
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 154/282 (54%), Gaps = 26/282 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+
Sbjct: 123 RYILDGIITLVDAAHADTHLAQTI-------AQAQIGFADRLLVSKRDLVDDATFDALSA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G++D+ +L V G++L + D + G+
Sbjct: 176 RLTRINRRAPIRIVEHGNIDLAELLDVRGFNL-------NADLGGGMILRPLAPVGN--- 225
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
++S+ + SE L+LD + +++ L+E+ G+ L R KG+L++ ++ VF
Sbjct: 226 ------SGDRITSLVLRSEKPLNLDRLSEFMNELLEDHGKQLLRYKGVLNIEDEPRKMVF 279
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W E+R + +VFI L E +R GF+
Sbjct: 280 QGVLKLYGFDWDTEWAEGEQRESVIVFIADELPEEKIRAGFE 321
>gi|289628321|ref|ZP_06461275.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. aesculi str. NCPPB 3681]
gi|289650119|ref|ZP_06481462.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. aesculi str. 2250]
gi|422584177|ref|ZP_16659290.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|298156633|gb|EFH97727.1| predicted nucleotide-binding protein [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330868997|gb|EGH03706.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. aesculi str. 0893_23]
Length = 325
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 154/282 (54%), Gaps = 26/282 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+
Sbjct: 123 RYILDGIITLVDAAHADTHLAQTI-------AQAQIGFADRLLVSKRDLVDDATFDALSA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G++D+ +L V G++L + D + G+
Sbjct: 176 RLTRINRRAPIRIVEHGNIDLAELLDVRGFNL-------NADLGGGMILRPLAPVGN--- 225
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
++S+ + SE L+LD + +++ L+E+ G+ L R KG+L++ ++ VF
Sbjct: 226 ------SGDRITSLVLRSEKPLNLDRLSEFMNELLEDHGKQLLRYKGVLNIEDEPRKMVF 279
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W E+R + +VFI L E +R GF+
Sbjct: 280 QGVLKLYGFDWDTEWAEGEQRESVIVFIADELPEEKIRAGFE 321
>gi|104780038|ref|YP_606536.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
entomophila L48]
gi|95109025|emb|CAK13721.1| putative cobalamin synthesis protein/P47K family protein
[Pseudomonas entomophila L48]
Length = 325
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 151/283 (53%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC++ GDL + L L L + G+ FD +VIE TGLA PAPV +TF +E +
Sbjct: 61 LANGCVCCSIHGDLTRALYLLLERLDAGEIAFDRLVIECTGLADPAPVAQTFFIEEELRD 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG++TLVD+ HA HL + A QV +ADR++L+K DLV + +L E
Sbjct: 121 RYLLDGIVTLVDAAHAELHLTQAI-------AQAQVGFADRLLLSKTDLVEPQAVDALRE 173
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN A +++ ++G +D+ +L V G++L N + +
Sbjct: 174 RLARINGRAAIRVVEHGRIDLAELLDVRGFNL----------NPDLGISLKPALRPVLKP 223
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+ +S++ + +E LD+D + D++ L+E G+ L R KG+L+++G +++ VF
Sbjct: 224 TTPDR-----ISTLVLRTETPLDIDRLSDFMNELLEAHGKQLLRYKGVLNIAGEDRRLVF 278
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV W E R + +VFI L E +R GF+
Sbjct: 279 QGVLKLYGFDWDAEWKDGEARESVMVFIADELPEEKIRAGFEA 321
>gi|355652311|ref|ZP_09056707.1| hypothetical protein HMPREF1030_05793 [Pseudomonas sp. 2_1_26]
gi|354824142|gb|EHF08396.1| hypothetical protein HMPREF1030_05793 [Pseudomonas sp. 2_1_26]
Length = 334
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 153/282 (54%), Gaps = 24/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CC++ DL K L L +++ FD +VIE TGLA PAPV +TF DE + Q
Sbjct: 68 LSNGCVCCSINTDLEKALFLLLERRDNGEIDFDRLVIECTGLADPAPVAQTFFADEELCQ 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ +A +HL E A QV +ADRI+++K DLV +L +
Sbjct: 128 RYVLDGIITLVDAANAERHLQETI-------AQAQVGFADRILVSKTDLVDAATFEALGQ 180
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ IN A V + ++G +D+ +L V G++L + D A +
Sbjct: 181 RLQRINRRALVHVVEHGRIDLAHLLDVRGFNL-------NADLGPGIGLRPLRAVAAKDS 233
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+ ++ + S+ LDL+ + ++++ L++ G L R KG+L+++ ++ VF
Sbjct: 234 RDR-------IGTLVLRSDTPLDLERLSEFMDDLLQWHGNSLLRYKGVLNIADEPRRLVF 286
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W DE R + +VFIG NL E ++R+GF+
Sbjct: 287 QGVLRLYGFDWDSEWRDDEARESVIVFIGDNLPEDSIREGFE 328
>gi|296391419|ref|ZP_06880894.1| putative cobalamin synthesis protein/P47K family protein
[Pseudomonas aeruginosa PAb1]
gi|416878484|ref|ZP_11920415.1| putative cobalamin synthesis protein/P47K family protein
[Pseudomonas aeruginosa 152504]
gi|334838303|gb|EGM17029.1| putative cobalamin synthesis protein/P47K family protein
[Pseudomonas aeruginosa 152504]
Length = 334
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 153/282 (54%), Gaps = 24/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CC++ DL K L L +++ FD +VIE TGLA PAPV +TF DE + Q
Sbjct: 68 LSNGCVCCSINTDLEKALFLLLERRDNGEIDFDRLVIECTGLADPAPVAQTFFADEELCQ 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ +A +HL E A QV +ADRI+++K DLV +L +
Sbjct: 128 RYVLDGIITLVDAANAERHLQETI-------AQAQVGFADRILVSKTDLVDAATFEALGQ 180
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ IN A V + ++G +D+ +L V G++L + D A +
Sbjct: 181 RLQRINRRALVHVVEHGRIDLAHLLDVRGFNL-------NADLGPGIGLRPLRAVAAKDS 233
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+ ++ + S+ LDL+ + ++++ L++ G L R KG+L+++ ++ VF
Sbjct: 234 RDR-------IGTLVLRSDTPLDLERLSEFMDDLLQWHGNSLLRYKGVLNIADEPRRLVF 286
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W DE R + +VFIG NL E ++R+GF+
Sbjct: 287 QGVLRLYGFDWDSEWRDDEARESVIVFIGDNLPEDSIREGFE 328
>gi|111309388|gb|AAI20992.1| COBW domain containing 2 [Homo sapiens]
Length = 395
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 158/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLAEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRATIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ +L + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDLSNILDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV +GRNLD+ L++ F
Sbjct: 326 SQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLLGRNLDKDILKQLF 373
>gi|34596562|gb|AAQ76869.1| COBW domain containing protein 1 [Homo sapiens]
gi|124375880|gb|AAI32760.1| COBW domain containing 1 [Homo sapiens]
gi|313883324|gb|ADR83148.1| COBW domain containing 1 [synthetic construct]
Length = 395
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 157/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDSGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV +GRNLD+ L++ F
Sbjct: 326 SQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLLGRNLDKDILKQLF 373
>gi|229577183|ref|NP_001153319.1| COBW domain-containing protein 3 [Pongo abelii]
gi|34596566|gb|AAQ76871.1| COBW domain containing protein [Pongo pygmaeus]
gi|55729145|emb|CAH91309.1| hypothetical protein [Pongo abelii]
Length = 395
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 158/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLRAMENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFEVPGNAKEEPLNIFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV IG+NLD+ L++ F
Sbjct: 326 SQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLIGKNLDKDILKQLF 373
>gi|291383328|ref|XP_002708278.1| PREDICTED: HCOBP-like [Oryctolagus cuniculus]
Length = 386
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 153/288 (53%), Gaps = 46/288 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L ++K G+FD+I++ETTGLA P V F D + +
Sbjct: 104 LGNGCLCCSVKDNGIRAIENLMQRK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 162
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ +HL E KP ++NEA QVA AD I++NK DLV E +L L I+
Sbjct: 163 LDGIITVVDSKYGFKHLTEEKPDGLINEATRQVALADIILMNKTDLVPEEDLNKLRTTIR 222
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + LE S + H T
Sbjct: 223 SINGLGKI--------------------LETQRSSLQKKLQHVPTTQP------------ 250
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
H+ D ++++VT G + + ++++++ L+ EK ++ R+KG++S+
Sbjct: 251 -HL-DQSITTVTFEVPGNVKEERLNEFIQSLLWEKNVTDKDRHCMEVIRLKGLVSIKEKP 308
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV IGRNLD+T L++ F
Sbjct: 309 QQVIVQGVHELYDLEETP-VSWADDTERTNRLVLIGRNLDKTILKQLF 355
>gi|57114075|ref|NP_001009106.1| COBW domain-containing protein 2 [Pan troglodytes]
gi|34596572|gb|AAQ76874.1| COBW domain containing protein [Pan troglodytes]
Length = 395
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 158/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV +GRNLD+ L++ F
Sbjct: 326 SQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLLGRNLDKDILKQLF 373
>gi|327263582|ref|XP_003216598.1| PREDICTED: COBW domain-containing protein 2-like [Anolis
carolinensis]
Length = 381
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 158/287 (55%), Gaps = 25/287 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + +K + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 100 LRNGCLCCSVKDNGLKAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 158
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG++++VD+K+ +QHL E KP ++NEA Q+A AD +I+NK DLV++ L L ++
Sbjct: 159 LDGIVSVVDAKYGLQHLREEKPSDLINEAARQIALADLVIINKTDLVSQEALTKLIRTVR 218
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN +A + + VD+ VL ++H +S + E H
Sbjct: 219 SINGLAKLLETQRSRVDISDVL------------DLHAFDSFSGKSLQQRL--QLEEAPH 264
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG-ED-------LYRMKGILSVSGSE 233
H+ S V+S V+ G+ ++++ +++ L+ EK ED + R+KG++S+
Sbjct: 265 PHLDKSIVTSTFEVA-GSSTEEDLNVFVQNLLWEKNVEDKRGNPMEVIRLKGLVSIKDKP 323
Query: 234 QQYVFQGVHSTLDGCPGKA-WGPDEKRINKLVFIGRNLDETALRKGF 279
Q + QGVH D W + +R N+LVFIGRNLD+ L+ F
Sbjct: 324 HQVIVQGVHELYDLEETTVKWTEENERTNRLVFIGRNLDKDILKDVF 370
>gi|74743388|sp|Q5RIA9.1|CBWD5_HUMAN RecName: Full=COBW domain-containing protein 5; AltName:
Full=Cobalamin synthase W domain-containing protein 5
Length = 395
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 157/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDDILLETTGLADPGAVTSMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 326 SQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLIGRNLDKDILKQLF 373
>gi|116052746|ref|YP_793063.1| hypothetical protein PA14_60920 [Pseudomonas aeruginosa UCBPP-PA14]
gi|421176859|ref|ZP_15634518.1| hypothetical protein PACI27_5069 [Pseudomonas aeruginosa CI27]
gi|115587967|gb|ABJ13982.1| putative cobalamin synthesis protein/P47K family protein
[Pseudomonas aeruginosa UCBPP-PA14]
gi|404530496|gb|EKA40496.1| hypothetical protein PACI27_5069 [Pseudomonas aeruginosa CI27]
Length = 334
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 155/282 (54%), Gaps = 24/282 (8%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CC++ DL K L L L ++ G+ FD +VIE TGLA PAPV +TF DE + Q
Sbjct: 68 LSNGCVCCSINTDLEKALFLLLERRDNGEIDFDRLVIECTGLADPAPVAQTFFADEELCQ 127
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ +A +HL E A QV +ADRI+++K DLV +L +
Sbjct: 128 RYVLDGIITLVDAANAERHLQETI-------AQAQVGFADRILVSKTDLVDAATFEALGQ 180
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ IN A V + ++G +D+ +L V G++L + D A +
Sbjct: 181 RLQRINRRALVHVVEHGRIDLAHLLDVRGFNL-------NADLGPGIGLRPLRAVAAKDS 233
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+ ++ + S+ LDL+ + ++++ L++ G L R KG+L+++ ++ VF
Sbjct: 234 SDR-------IGTLVLRSDTPLDLERLSEFMDDLLQWHGNSLLRYKGVLNIADEPRRLVF 286
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W DE R + +VFIG NL E ++R+GF+
Sbjct: 287 QGVLRLYGFDWDSEWRDDEARESVIVFIGDNLPEDSIREGFE 328
>gi|422605104|ref|ZP_16677119.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. mori str. 301020]
gi|330888761|gb|EGH21422.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. mori str. 301020]
Length = 325
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 153/282 (54%), Gaps = 26/282 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L
Sbjct: 123 RYILDGIITLVDAAHADTHLAQTI-------AQAQIGFADRLLVSKRDLVDDAAFDALCA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G++D+ +L V G++L + D + G+
Sbjct: 176 RLTRINRRAPIRIVEHGNIDLAELLDVRGFNL-------NADLGGGMILRPLAPVGN--- 225
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
++S+ + SE L+LD + +++ L+E+ G+ L R KG+L++ ++ VF
Sbjct: 226 ------SGDRITSLVLRSEKPLNLDRLSEFMNELLEDHGKQLLRYKGVLNIEDEPRKMVF 279
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W EKR + +VFI L E +R GF+
Sbjct: 280 QGVLKLYGFDWDTEWAEGEKRESVIVFIADELPEEKIRVGFE 321
>gi|254454075|ref|ZP_05067512.1| cobalamin synthesis protein/P47K [Octadecabacter arcticus 238]
gi|198268481|gb|EDY92751.1| cobalamin synthesis protein/P47K [Octadecabacter arcticus 238]
Length = 358
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 151/283 (53%), Gaps = 15/283 (5%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVS 57
++ +GCLCC++RGDL + LL LA +K+ FD +VIETTGLA PAP+++TF D ++
Sbjct: 67 LMQSGCLCCSIRGDLSRTLLDLAARKKEDLLTFDRVVIETTGLADPAPILQTFLLDTYLA 126
Query: 58 QYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLT 117
+ ++DGV+T+VD+ LN +F EAV QVA AD ++L+K DLV+E+ G+L
Sbjct: 127 KNFRIDGVVTVVDAATGPDTLNR---QF---EAVSQVAMADFLVLSKTDLVSESTSGALK 180
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE-RIDSEVHVDNSHCATHHHESAHG-- 174
R++ IN A + A G V + + G + D V ++ G
Sbjct: 181 TRLRSINPTADILRADRGGVPTTALWDLSGMRPQGSSDHAVAWLTPTAPVDPLDNLSGLG 240
Query: 175 -HHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSE 233
HD+ + S +I+ + + D D WL+RLI +G ++ R+KGI+ + G E
Sbjct: 241 SFAASTAPAPKHDARIGSASIILDDPIPADAFDLWLDRLIMLRGPNILRVKGIVHLIGIE 300
Query: 234 QQYVFQGVHSTLD-GCPGKAWGPDEKRINKLVFIGRNLDETAL 275
+VF GV D P W + R +++V I R++ L
Sbjct: 301 MPFVFHGVQHLFDPPVPLNDWH-GKNRQSRIVVIARDMTSAEL 342
>gi|148727351|ref|NP_958861.2| COBW domain-containing protein 3 [Homo sapiens]
gi|74742238|sp|Q5JTY5.1|CBWD3_HUMAN RecName: Full=COBW domain-containing protein 3; AltName:
Full=Cobalamin synthase W domain-containing protein 3
gi|225000108|gb|AAI72342.1| COBW domain containing 3 [synthetic construct]
Length = 395
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 157/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDDILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 326 SQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLIGRNLDKDILKQLF 373
>gi|148235439|ref|NP_001086922.1| COBW domain containing 2 [Xenopus laevis]
gi|50414748|gb|AAH77768.1| MGC80076 protein [Xenopus laevis]
Length = 360
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 162/292 (55%), Gaps = 27/292 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + +K + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 84 LRNGCLCCSVKDNGLKAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 142
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG++++VD+K+A+QH+ E KP +++EA QVA AD +I+NK DLV+E +L ++ +
Sbjct: 143 LDGIVSVVDAKYALQHIQEEKPEGLIDEAARQVALADVLIINKTDLVSEEKLDAVRSAVS 202
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + VD+ +L + +D + + GH H
Sbjct: 203 FINGFVKILETQRSRVDLMDILDLHAFD-------------SLSGRSLQDKLVTSTGHPH 249
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK--------GEDLYRMKGILSVSGSE 233
D ++ +VT G++ + ++ +++ L+ EK ++ R+KG++SV+
Sbjct: 250 ---LDKSIVTVTFEVPGSISEENLNLFIQNLLWEKNVINMTGNAMEVIRLKGLVSVTDKP 306
Query: 234 QQYVFQGVHSTLDGCPGK-AW-GPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QQ + QGVH D + +W ++ R+N++VFIGR+LD+ L + F+ +
Sbjct: 307 QQVILQGVHELYDLEETQISWQDSNDSRVNRMVFIGRHLDKKILVQLFRSAM 358
>gi|384260544|ref|YP_005415730.1| Cobalamin synthesis protein/P47K [Rhodospirillum photometricum DSM
122]
gi|378401644|emb|CCG06760.1| Cobalamin synthesis protein/P47K [Rhodospirillum photometricum DSM
122]
Length = 380
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 165/331 (49%), Gaps = 67/331 (20%)
Query: 1 MVNNGCLCCTVRGDLV----KMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELV 56
++N GCLCCTVRGD+V ++ L+ K + +F +VIETTGLA PAP++ T TD L+
Sbjct: 61 LLNAGCLCCTVRGDMVTALRELFLKRVKGEVPEFQRLVIETTGLADPAPILHTLMTDPLI 120
Query: 57 SQYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSL 116
S + +LDGVIT+VD+ A + L++ +P EAV+QVA ADR++L K DLV + +L
Sbjct: 121 SAHYRLDGVITVVDACLAARQLDQ-QP-----EAVKQVAVADRLVLTKTDLVDPQDQDAL 174
Query: 117 TERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHH 176
TER++ +N AP+ +A++G++D D +L G + L+ ++V A E A+
Sbjct: 175 TERLRALNPAAPILIAQHGALDYDLLLDCGLFSLDGKTADV-------ARWLREEAYEAE 227
Query: 177 EG---------------------------------------HHHNHMHDSAVSSVTIVSE 197
G H + HD + + + +
Sbjct: 228 RGDDPAHRHHHHGHHHHHDHNHDHDHHHDHPHDHHEHDEHHRHDRNRHDDHIGAFVLTYD 287
Query: 198 GTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV----HSTLDGCPGKAW 253
L D ++ LI KGE L R+KGIL + G ++ GV H L P AW
Sbjct: 288 KPLPWDAFVMAMDMLIASKGEGLLRVKGILDIQGQDKPIAVHGVQHIFHPPL-ALP--AW 344
Query: 254 GPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
E + ++LVFI R+L R G LA
Sbjct: 345 PEGEPKRSRLVFITRDLT----RDSVAGLLA 371
>gi|332249501|ref|XP_003273896.1| PREDICTED: COBW domain-containing protein 5-like isoform 3
[Nomascus leucogenys]
Length = 367
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 157/295 (53%), Gaps = 41/295 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 75 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWIDAELGSDIY 133
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 134 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIR 193
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHG------- 174
IN + + LE S VH+ N H +S G
Sbjct: 194 SINGLGQI--------------------LETQRSRVHLSNV-LDLHAFDSLSGISLQKKL 232
Query: 175 HHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGI 226
H H+ D ++ ++T G ++++ +++ L+ EK ++ R+KG+
Sbjct: 233 QHVPGTQPHL-DQSIVTITFEVPGNAKEEQLNIFIQNLLWEKNVRNKDSHCMEVIRLKGL 291
Query: 227 LSVSGSEQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
+S+ QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 292 VSIKDKSQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLIGRNLDKDILKQLF 345
>gi|421746164|ref|ZP_16183977.1| cobalamin synthesis protein [Cupriavidus necator HPC(L)]
gi|409775319|gb|EKN56824.1| cobalamin synthesis protein [Cupriavidus necator HPC(L)]
Length = 361
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 160/311 (51%), Gaps = 39/311 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDLV+ L L ++ F+ +VIETTG+A P PV +TF D+ ++
Sbjct: 62 MSNGCICCTIRGDLVQALSDLIGRRDAGEIDFERVVIETTGVANPGPVAQTFFMDDEIAS 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD V+TLVD+KH Q L++ + EA QV +AD I + K DLV+ EL L
Sbjct: 122 RYLLDAVVTLVDAKHGNQQLDKQE------EAQRQVGFADAIFITKADLVSADELADLRH 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVD------------------ 160
R+ +N AP+ A +G +D + + G++L ++++ +D
Sbjct: 176 RVLQMNPRAPIGTAHFGEAPIDSIFDLRGFNL---NAKLEIDPDFLRAEEHDHDHDHDHD 232
Query: 161 -------NSHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLI 213
+ C H H HHH+H D + S S+ +++++L ++
Sbjct: 233 HEHGEHCGADCGHDHEHHHGHGHNHHHHHHHTDR-IGSFVFRSDKPFHYGKLEEFLSGIL 291
Query: 214 EEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDET 273
GE L R KG+L + G +++ VFQGVH + G W DE K+VFIG +L +
Sbjct: 292 TVYGEKLLRYKGVLYMEGVDRKVVFQGVHQLMGSDIGGKW-EDETPGTKMVFIGVDLPKD 350
Query: 274 ALRKGFKGCLA 284
A+ KG CLA
Sbjct: 351 AILKGLANCLA 361
>gi|332249497|ref|XP_003273894.1| PREDICTED: COBW domain-containing protein 5-like isoform 1
[Nomascus leucogenys]
Length = 395
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 157/295 (53%), Gaps = 41/295 (13%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWIDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHG------- 174
IN + G LE S VH+ N H +S G
Sbjct: 222 SINGL--------------------GQILETQRSRVHLSNV-LDLHAFDSLSGISLQKKL 260
Query: 175 HHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGI 226
H H+ D ++ ++T G ++++ +++ L+ EK ++ R+KG+
Sbjct: 261 QHVPGTQPHL-DQSIVTITFEVPGNAKEEQLNIFIQNLLWEKNVRNKDSHCMEVIRLKGL 319
Query: 227 LSVSGSEQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
+S+ QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 320 VSIKDKSQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLIGRNLDKDILKQLF 373
>gi|409394366|ref|ZP_11245577.1| Cobalamin synthesis protein [Pseudomonas sp. Chol1]
gi|409121109|gb|EKM97262.1| Cobalamin synthesis protein [Pseudomonas sp. Chol1]
Length = 323
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 154/287 (53%), Gaps = 29/287 (10%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCT-DELVS 57
+ NGC+CC++ +L K L L L K G+ F+ +VIE TGLA PAPV +TF DEL
Sbjct: 62 LANGCVCCSIHVELEKALYLLLDKLDSGELAFERLVIECTGLADPAPVAQTFFAGDELCE 121
Query: 58 QYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLT 117
+YV LDG+ITLVD+ +A +HL E + A QV +ADRI+L+K DLV + +L+
Sbjct: 122 RYV-LDGIITLVDAANAERHLQE-------SIAQAQVGFADRILLSKTDLVEAPAVEALS 173
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
+R++ IN AP+ + ++G +++ +L + G++L + + A
Sbjct: 174 QRLQRINRRAPIHIVEHGRIELAELLDIRGFNL-----------------NADIAPAPAL 216
Query: 178 GHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYV 237
++++ + SE LD+ + ++E L+E G L R KG+L V+G ++ V
Sbjct: 217 RPLLPATSKDRIATLVLHSERPLDMQRLSAFMEDLLERHGNALLRYKGVLEVAGEPRRLV 276
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
FQGV W E R + LVFIG NL E +R GF A
Sbjct: 277 FQGVLRLYGFDWDAEWAEGEARRSVLVFIGDNLPEAEIRAGFTAVQA 323
>gi|47217513|emb|CAG10893.1| unnamed protein product [Tetraodon nigroviridis]
Length = 371
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 161/291 (55%), Gaps = 32/291 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + +K + L KK G+FD+I++ETTGLA P V F D + +
Sbjct: 93 LRNGCLCCSVKDNGLKAIENLMGKK-GKFDYILLETTGLADPGAVASMFWVDAELGSEIY 151
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG++T++D+K+ +Q L E K +VNEA QVA AD I+NK DLV E EL + ++
Sbjct: 152 LDGIVTVIDAKYGLQQLTEEKADGLVNEAARQVAVADLTIINKTDLVNEEELAEVRAAVR 211
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHH--ESAHGHHEGH 179
+N +A + + VD+ VL DL DS+ D ++ A ++ H
Sbjct: 212 AVNGLAKIIETQKSKVDLSEVL-----DLHSFDSK---DGANLAEKLQLVKATKPH---- 259
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK------GEDL--YRMKGILSVSG 231
D ++ +VT G + D +D +++ L+ EK G+ + R KGI++++G
Sbjct: 260 -----LDKSILTVTFEVAGDVSEDALDVFIQDLLWEKTFKNKAGQPMTVIRSKGIVALAG 314
Query: 232 SEQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
Q + QGVH L+ P + WG + RIN+LVFIG+NLD+ L + FK
Sbjct: 315 KAHQVMLQGVHELYELNETP-QLWG-ENPRINRLVFIGKNLDKEILEEHFK 363
>gi|37520103|ref|NP_923480.1| hypothetical protein glr0534 [Gloeobacter violaceus PCC 7421]
gi|35211095|dbj|BAC88475.1| glr0534 [Gloeobacter violaceus PCC 7421]
Length = 449
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 132/204 (64%), Gaps = 16/204 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL++++ L ++K +FDHI++ETTGLA P+PV +TF D+ + +K
Sbjct: 62 MNNGCICCTVRGDLIRIIGSLMRRKD-KFDHILVETTGLADPSPVAQTFFVDDEMRSQLK 120
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG++T+VD++H QH+++ ++ EQ+A+AD I+LNK DLVT EL +L +R++
Sbjct: 121 LDGIVTVVDARHIWQHIDQ------SDQCKEQIAFADVILLNKTDLVTPEELDTLEQRVR 174
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE---G 178
+NA+A V + +V+MD VL +GG+DLER + V + + G +E G
Sbjct: 175 SMNALARVHRTQNAAVEMDRVLEIGGFDLER---ALAVKPTFLEPEYPFEWGGIYELAAG 231
Query: 179 HHHNHMHDSAVSSVTI---VSEGT 199
+ + D SS+T+ +EGT
Sbjct: 232 TYTLALQDGPDSSMTLALFAAEGT 255
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 86/166 (51%), Gaps = 15/166 (9%)
Query: 127 APV--KLAKYGSVDMDFVLGVGG-YDL------ERIDSEVHVDNSHCATHHHESAHGHHE 177
APV LAK G+ D + + G Y L E D VH + AT
Sbjct: 289 APVALNLAKAGAKDFFLEIQMAGTYSLFTQHRPEEFDLTVHAADG--ATRTPRIGRTFEA 346
Query: 178 GHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYV 237
GH HD V+SV I +G +D ++ WL L+ E+G D++R KGIL + G ++YV
Sbjct: 347 GH----THDEEVTSVGIEVQGAVDPKKLSAWLSVLLREQGVDIFRTKGILHLQGDNRRYV 402
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
FQGVH D + WG DE R N+LVFIGRNLD L + FK CL
Sbjct: 403 FQGVHMLFDSSADRPWGSDEPRTNQLVFIGRNLDRNRLVREFKACL 448
>gi|429210228|ref|ZP_19201395.1| putative cobalamin synthesis protein/P47K family protein
[Pseudomonas sp. M1]
gi|428159002|gb|EKX05548.1| putative cobalamin synthesis protein/P47K family protein
[Pseudomonas sp. M1]
Length = 326
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 157/285 (55%), Gaps = 28/285 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL + L L L ++ G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 66 LSNGCVCCTINNDLERSLYLLLEQRDSGEIAFDRLVIECTGLADPAPVAQTFFVDETLRE 125
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ +A +HL E A QV + DRI+++K DLV+ + +L E
Sbjct: 126 RYLLDGIITLVDAANADRHLQEAI-------AQAQVGFGDRILVSKRDLVSAEQYQALAE 178
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ IN A + +G ++++ +L V G++L N+ +
Sbjct: 179 RLQRINRRAELYPVDHGRIELERLLDVRGFNL----------NADLGLRPLQPL------ 222
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
D + ++ + S+ L+++ + ++++ L++ G L R KG+L++ G E++ VF
Sbjct: 223 -RPVAASDDRIRTLVLRSDKPLNIERLSEFMDDLLQWHGNSLLRYKGVLNIQGEERRLVF 281
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
QGV WG +E R + +VFIG NL E +R+GF+ +
Sbjct: 282 QGVLRLYGFDWDTPWG-EEARESVIVFIGDNLPEEQIRQGFEAIV 325
>gi|146231952|ref|NP_001078926.1| COBW domain-containing protein 6 [Homo sapiens]
gi|74753577|sp|Q4V339.1|CBWD6_HUMAN RecName: Full=COBW domain-containing protein 6; AltName:
Full=Cobalamin synthase W domain-containing protein 6
Length = 395
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 157/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDDILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L ++
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTLR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFDVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 326 SQQVIVQGVHELCDLEETP-VSWKDDTERTNRLVLIGRNLDKDILKQLF 373
>gi|53724455|ref|YP_104730.1| cobalamin synthesis protein/P47K family protein [Burkholderia
mallei ATCC 23344]
gi|67639318|ref|ZP_00438188.1| cobalamin synthesis protein/P47K family protein [Burkholderia
mallei GB8 horse 4]
gi|76809797|ref|YP_331803.1| cobalamin synthesis protein/P47K family protein [Burkholderia
pseudomallei 1710b]
gi|121599088|ref|YP_994212.1| cobalamin synthesis protein/P47K family protein [Burkholderia
mallei SAVP1]
gi|124386498|ref|YP_001028135.1| cobalamin synthesis protein/P47K family protein [Burkholderia
mallei NCTC 10229]
gi|126439649|ref|YP_001057246.1| CobW/P47K family protein [Burkholderia pseudomallei 668]
gi|126450544|ref|YP_001082946.1| cobalamin synthesis protein/P47K family protein [Burkholderia
mallei NCTC 10247]
gi|126453239|ref|YP_001064488.1| CobW/P47K family protein [Burkholderia pseudomallei 1106a]
gi|167892317|ref|ZP_02479719.1| hypothetical protein Bpse7_01054 [Burkholderia pseudomallei 7894]
gi|226199809|ref|ZP_03795360.1| CobW/P47K family protein [Burkholderia pseudomallei Pakistan 9]
gi|237810383|ref|YP_002894834.1| cobalamin synthesis protein/P47K family protein [Burkholderia
pseudomallei MSHR346]
gi|242315294|ref|ZP_04814310.1| CobW/P47K family protein [Burkholderia pseudomallei 1106b]
gi|251767988|ref|ZP_02269091.2| CobW/P47K family protein [Burkholderia mallei PRL-20]
gi|254182210|ref|ZP_04888807.1| CobW/P47K family protein [Burkholderia pseudomallei 1655]
gi|254261962|ref|ZP_04953016.1| CobW/P47K family protein [Burkholderia pseudomallei 1710a]
gi|403516856|ref|YP_006650989.1| CobW/P47K family protein [Burkholderia pseudomallei BPC006]
gi|418558165|ref|ZP_13122731.1| cobalamin synthesis protein/P47K family protein [Burkholderia
pseudomallei 354e]
gi|52427878|gb|AAU48471.1| cobalamin synthesis protein/P47K family protein [Burkholderia
mallei ATCC 23344]
gi|76579250|gb|ABA48725.1| cobalamin synthesis protein/P47K family protein [Burkholderia
pseudomallei 1710b]
gi|121227898|gb|ABM50416.1| cobalamin synthesis protein/P47K family protein [Burkholderia
mallei SAVP1]
gi|124294518|gb|ABN03787.1| cobalamin synthesis protein/P47K family protein [Burkholderia
mallei NCTC 10229]
gi|126219142|gb|ABN82648.1| CobW/P47K family protein [Burkholderia pseudomallei 668]
gi|126226881|gb|ABN90421.1| CobW/P47K family protein [Burkholderia pseudomallei 1106a]
gi|126243414|gb|ABO06507.1| cobalamin synthesis protein/P47K family protein [Burkholderia
mallei NCTC 10247]
gi|184212748|gb|EDU09791.1| CobW/P47K family protein [Burkholderia pseudomallei 1655]
gi|225928160|gb|EEH24196.1| CobW/P47K family protein [Burkholderia pseudomallei Pakistan 9]
gi|237504669|gb|ACQ96987.1| cobalamin synthesis protein/P47K family protein [Burkholderia
pseudomallei MSHR346]
gi|238519854|gb|EEP83320.1| cobalamin synthesis protein/P47K family protein [Burkholderia
mallei GB8 horse 4]
gi|242138533|gb|EES24935.1| CobW/P47K family protein [Burkholderia pseudomallei 1106b]
gi|243061113|gb|EES43299.1| CobW/P47K family protein [Burkholderia mallei PRL-20]
gi|254220651|gb|EET10035.1| CobW/P47K family protein [Burkholderia pseudomallei 1710a]
gi|385363153|gb|EIF68933.1| cobalamin synthesis protein/P47K family protein [Burkholderia
pseudomallei 354e]
gi|403072500|gb|AFR14080.1| CobW/P47K family protein [Burkholderia pseudomallei BPC006]
Length = 358
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/309 (34%), Positives = 165/309 (53%), Gaps = 36/309 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA KK+ FD +VIETTGLA P PV +TF D ++
Sbjct: 60 MSNGCICCTIRGDLARALADLAAKKRDGTFDFDRVVIETTGLANPGPVAQTFFIDSEIAD 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + L
Sbjct: 120 EFLLDAVITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKADLVDDEAVSELK 172
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCA------------ 165
R+ H+N A +K+ +G D+ + + G++L ++++ +D A
Sbjct: 173 HRLLHMNPKAAIKVVNFGDADIKEIFDLRGFNL---NAKLEIDPDFLAEDDHAHAHHDDH 229
Query: 166 ----------THHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEE 215
H E HGH HH+ HD + S ++ D ++++D+L +++
Sbjct: 230 DHDHAHCDHDHGHCEHDHGHGHHDHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQI 289
Query: 216 KGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETAL 275
GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L +
Sbjct: 290 YGERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPAEKKTNKMVFIGVDLPRDLI 349
Query: 276 RKGFKGCLA 284
G CLA
Sbjct: 350 TDGLDACLA 358
>gi|53717848|ref|YP_106834.1| hypothetical protein BPSL0206 [Burkholderia pseudomallei K96243]
gi|52208262|emb|CAH34193.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
Length = 370
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/309 (34%), Positives = 165/309 (53%), Gaps = 36/309 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA KK+ FD +VIETTGLA P PV +TF D ++
Sbjct: 72 MSNGCICCTIRGDLARALADLAAKKRDGTFDFDRVVIETTGLANPGPVAQTFFIDSEIAD 131
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + L
Sbjct: 132 EFLLDAVITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKADLVDDEAVSELK 184
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCA------------ 165
R+ H+N A +K+ +G D+ + + G++L ++++ +D A
Sbjct: 185 HRLLHMNPKAAIKVVNFGDADIKEIFDLRGFNL---NAKLEIDPDFLAEDDHAHAHHDDH 241
Query: 166 ----------THHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEE 215
H E HGH HH+ HD + S ++ D ++++D+L +++
Sbjct: 242 DHDHAHCDHDHGHCEHDHGHGHHDHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQI 301
Query: 216 KGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETAL 275
GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L +
Sbjct: 302 YGERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPAEKKTNKMVFIGVDLPRDLI 361
Query: 276 RKGFKGCLA 284
G CLA
Sbjct: 362 TDGLDACLA 370
>gi|237801448|ref|ZP_04589909.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331024307|gb|EGI04364.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. oryzae str. 1_6]
Length = 325
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 152/282 (53%), Gaps = 26/282 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+
Sbjct: 123 RYILDGIITLVDAAHADTHLAQTI-------AQAQIGFADRLLVSKRDLVDDAAFDALSA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ +G +D+ +L V G++L + D + G+
Sbjct: 176 RLARINRRAPIRIVDHGKIDLAELLDVRGFNL-------NADLGGGMVLRPLAPVGNSGD 228
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
++S+ + S+ L+LD + +++ L+E+ G+ L R KG+L++ ++ VF
Sbjct: 229 R---------ITSLVLRSDKPLNLDRLSEFMNELLEDHGKQLLRYKGVLNIEDEPRKMVF 279
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W E+R + +VFI L E +R GF+
Sbjct: 280 QGVLKLYGFDWDTEWAEGEQRESVIVFIADELPEEKIRAGFE 321
>gi|345318560|ref|XP_001516687.2| PREDICTED: LOW QUALITY PROTEIN: COBW domain-containing protein
2-like [Ornithorhynchus anatinus]
Length = 398
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 155/293 (52%), Gaps = 27/293 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + +K + L +KK G+FD+I++ETTGLA P V F + + +
Sbjct: 106 LRNGCLCCSVKDNGLKAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVNAELGSDIY 164
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+I+LVDSK+ +++L E K +VNEA QVA AD +I+NK DLV+E EL +L ++
Sbjct: 165 LDGIISLVDSKYGLKYLTEEKADGLVNEAARQVALADLVIINKTDLVSEEELNTLKAAVR 224
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + V++ VL ++H +S H H
Sbjct: 225 SINGLVKILETQKSRVNLSNVL------------DLHAFDSLSGISFQNKLQLVQASHPH 272
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK--------GEDLYRMKGILSVSGSE 233
D ++ +VT G + ++ +++ L+ EK ++ R+KG++S
Sbjct: 273 ---LDMSIVTVTFEVPGNSSEENLNVFIQNLLWEKNVKNKDGCSMEIIRLKGLVSFKDKS 329
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
Q + QGV L+ P K W D +R N+LV IGRNLD+ L++ F +A
Sbjct: 330 HQVIIQGVRELYDLEDTPVK-WKEDAERTNRLVLIGRNLDKDILQQLFIATVA 381
>gi|157368825|ref|YP_001476814.1| putative GTP-binding protein YjiA [Serratia proteamaculans 568]
gi|157320589|gb|ABV39686.1| cobalamin synthesis protein P47K [Serratia proteamaculans 568]
Length = 320
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 156/283 (55%), Gaps = 27/283 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL---AKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CC+ +L LL L + Q +FD ++IE TG+A P P+ +TF + E++ +
Sbjct: 60 LSNGCICCSKSNELADALLDLLDGVAQGQLEFDRLIIECTGMADPGPITQTFFSHEILCE 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA Q LN+ F + +A QV YADRI+L K D+ + E +LT+
Sbjct: 120 RFLLDGIITLVDAAHADQQLNQ----FSIAQA--QVGYADRILLTKTDVAPDCE--ALTQ 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ +NA APV +G +D+ + + G+ L + ++++ A +
Sbjct: 172 RLQQMNARAPVYKVTHGDIDLGVLFDIEGFVL---NDKLNLTPPTPLFRRIPQAQNN--- 225
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+ S+ + E L+L +V + +E L+ E + L R KGILS+ ++ +F
Sbjct: 226 ----------IQSIVVYHEQPLELMQVSEVMEGLLLEYADSLLRYKGILSIKDEPRRLLF 275
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + + W PDE+R + LVFIG +L E +R+ F G
Sbjct: 276 QGVQRLYNADWDREWLPDEERRSTLVFIGVDLPEETIRERFAG 318
>gi|148709677|gb|EDL41623.1| COBW domain containing 1 [Mus musculus]
Length = 374
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 152/292 (52%), Gaps = 45/292 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 101 LRNGCLCCSVKDSGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 159
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP +VNEA QVA AD I++NK DLV+E EL +L I+
Sbjct: 160 LDGIITVVDSKYGLKHLTEEKPDGLVNEATRQVALADMILINKTDLVSEEELNNLRTTIR 219
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + V + V + +L + YD+
Sbjct: 220 SINGLGKVLETQRSRVHLSNILDLHAYDIL------------------------------ 249
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
S +S+VT G+ + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 250 -----SGISTVTFEVPGSAKEECLNVFIQNLLWEKNVKNKDGHCMEVIRLKGLVSIKDKP 304
Query: 234 QQYVFQGVHSTLDGCPGKA-WGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QQ + QG+H D W D +R +LVFIGRNLD+ L++ F +A
Sbjct: 305 QQMIVQGIHELYDLEESLVNWKDDAERACQLVFIGRNLDKDVLQQLFLTAVA 356
>gi|217425045|ref|ZP_03456541.1| CobW/P47K family protein [Burkholderia pseudomallei 576]
gi|386863339|ref|YP_006276288.1| cobalamin synthesis protein/P47K family protein [Burkholderia
pseudomallei 1026b]
gi|418539232|ref|ZP_13104828.1| cobalamin synthesis protein/P47K family protein [Burkholderia
pseudomallei 1026a]
gi|418545375|ref|ZP_13110632.1| cobalamin synthesis protein/P47K family protein [Burkholderia
pseudomallei 1258a]
gi|418548572|ref|ZP_13113683.1| cobalamin synthesis protein/P47K family protein [Burkholderia
pseudomallei 1258b]
gi|217392065|gb|EEC32091.1| CobW/P47K family protein [Burkholderia pseudomallei 576]
gi|385345856|gb|EIF52549.1| cobalamin synthesis protein/P47K family protein [Burkholderia
pseudomallei 1026a]
gi|385346311|gb|EIF52997.1| cobalamin synthesis protein/P47K family protein [Burkholderia
pseudomallei 1258a]
gi|385357883|gb|EIF63919.1| cobalamin synthesis protein/P47K family protein [Burkholderia
pseudomallei 1258b]
gi|385660467|gb|AFI67890.1| cobalamin synthesis protein/P47K family protein [Burkholderia
pseudomallei 1026b]
Length = 360
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 165/311 (53%), Gaps = 38/311 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA KK+ FD +VIETTGLA P PV +TF D ++
Sbjct: 60 MSNGCICCTIRGDLARALADLAAKKRDGTFDFDRVVIETTGLANPGPVAQTFFIDSEIAD 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + L
Sbjct: 120 EFLLDAVITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKADLVDDEAVSELK 172
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCA------------ 165
R+ H+N A +K+ +G D+ + + G++L ++++ +D A
Sbjct: 173 HRLLHMNPKAAIKVVNFGDADIKEIFDLRGFNL---NAKLEIDPDFLAEDDHAHAHHDDH 229
Query: 166 ------------THHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLI 213
H E HGH HH+ HD + S ++ D ++++D+L ++
Sbjct: 230 DHDHDHAHCDHDHGHCEHDHGHGHHDHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGIL 289
Query: 214 EEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDET 273
+ GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L
Sbjct: 290 QIYGERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPAEKKTNKMVFIGVDLPRD 349
Query: 274 ALRKGFKGCLA 284
+ G CLA
Sbjct: 350 LITDGLDACLA 360
>gi|365892253|ref|ZP_09430573.1| putative cobalamin synthesis protein/P47K family protein
[Bradyrhizobium sp. STM 3809]
gi|365331706|emb|CCE03104.1| putative cobalamin synthesis protein/P47K family protein
[Bradyrhizobium sp. STM 3809]
Length = 365
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 151/291 (51%), Gaps = 30/291 (10%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQ----GQFDHIVIETTGLAKPAPVIETFCTDELV 56
++ +GC+CCT+R DL + L L ++ F I+IETTGLA PAP+++ + LV
Sbjct: 68 VLASGCVCCTIRSDLEETLRALLVRRDRAEVPPFRRILIETTGLADPAPILQLLLNNPLV 127
Query: 57 SQYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSL 116
S +++LD V+T VD+ +A L+ +EAV+QVA ADR+++ K DLV + + +L
Sbjct: 128 SHFLRLDTVVTTVDAANAAHQLDRQ------DEAVKQVALADRLLVTKSDLVND--VAAL 179
Query: 117 TERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE--RIDSEVHVDNSHCATHHHESAHG 174
+R++ +N A ++ +G +D + G D E R+D + N E+AH
Sbjct: 180 EQRLRRLNPGARIERVSHGVIDPADLFGAALIDPEKKRVDVARWL-NEQAFAQCGETAHA 238
Query: 175 HHEGHHHNHMH---------------DSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGED 219
H G H+H H +S+V+S + + LD V WL L + +GED
Sbjct: 239 HGAGAEHDHAHHGPIGHDHGDHGHAHESSVTSFMLAFDEPLDWMTVSGWLAYLRQARGED 298
Query: 220 LYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNL 270
L R+KGIL++ G V GVH PD R +++VFI R +
Sbjct: 299 LLRVKGILNLHGEATPVVIHGVHHVFHPPVALPAWPDADRRSRIVFITRGI 349
>gi|348517328|ref|XP_003446186.1| PREDICTED: COBW domain-containing protein 2-like [Oreochromis
niloticus]
Length = 367
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 157/286 (54%), Gaps = 24/286 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + +K + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 87 LRNGCLCCSVKDNGLKAIENLMEKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 145
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG++T++D+K+ +Q L E K +VNEA Q+A AD I+NK DLVTE EL + + ++
Sbjct: 146 LDGIVTVIDAKYGLQQLAEEKADGLVNEAARQIAVADLTIINKTDLVTEEELKEVKDTVR 205
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + VD+ VL DL DS+ D ++ A E H
Sbjct: 206 SINGLVKIIETQRSRVDLSEVL-----DLHSFDSK---DGANLA----EKLQLVKPTRAH 253
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK------GEDL--YRMKGILSVSGSE 233
D ++ +VT G L D ++ +++ L+ EK G+ + R+KGI+S +
Sbjct: 254 ---LDKSILTVTFEIAGDLSEDALNAFIQDLLWEKIFCNKEGQPMSVIRLKGIVSFADKG 310
Query: 234 QQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
Q + QGVH + + + RIN+LVFIGRNLD+ L++ F
Sbjct: 311 HQVMLQGVHELYELNETQQLWEENPRINRLVFIGRNLDKDILQEKF 356
>gi|167900814|ref|ZP_02488019.1| hypothetical protein BpseN_00969 [Burkholderia pseudomallei NCTC
13177]
Length = 361
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 165/312 (52%), Gaps = 39/312 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA KK+ FD +VIETTGLA P PV +TF D ++
Sbjct: 60 MSNGCICCTIRGDLARALADLAAKKRDGTFDFDRVVIETTGLANPGPVAQTFFIDSEIAD 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + L
Sbjct: 120 EFLLDAVITLVDAKHANAQLDE-------HEVVQRQVGFADRLFITKADLVDDEAVSELK 172
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCA------------ 165
R+ H+N A +K+ +G D+ + + G++L ++++ +D A
Sbjct: 173 HRLLHMNPKAAIKVVNFGDADIKEIFDLRGFNL---NAKLEIDPDFLAEDDHAHAHHDDH 229
Query: 166 -------------THHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERL 212
H E HGH HH+ HD + S ++ D ++++D+L +
Sbjct: 230 DDHDHDHAHCDHDHGHCEHDHGHGHHDHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGI 289
Query: 213 IEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDE 272
++ GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L
Sbjct: 290 LQIYGERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPAEKKTNKMVFIGVDLPR 349
Query: 273 TALRKGFKGCLA 284
+ G CLA
Sbjct: 350 DLITDGLDACLA 361
>gi|422648082|ref|ZP_16711207.1| cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K
[Pseudomonas syringae pv. maculicola str. ES4326]
gi|330961621|gb|EGH61881.1| cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K
[Pseudomonas syringae pv. maculicola str. ES4326]
Length = 325
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 149/286 (52%), Gaps = 26/286 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKK---KQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L ++ + FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 LSNGCVCCTIHTDLTKALYLLLERLDCGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+
Sbjct: 123 RYILDGIITLVDAAHADTHLTQTI-------AQAQIGFADRLLVSKRDLVDDAAFDALSA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN A ++ +G +D+ +L V G++L + D T + G
Sbjct: 176 RLTRINRRAAIRTVDHGKIDLAELLDVRGFNL-------NADLGGGMTLRPLTPAGKSSD 228
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
++S+ + SE L+LD + +++ L+E+ G+ L R KG+L++ ++ VF
Sbjct: 229 R---------ITSLVLRSEKPLNLDRLSEFMNELLEDHGKQLLRYKGVLNIEDEPRKMVF 279
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QGV W E R + +VFI L E +R GF+ A
Sbjct: 280 QGVLKLYGFDWDIEWAEGEPRESVIVFIADELPEAKIRAGFEKVCA 325
>gi|83719451|ref|YP_440726.1| cobalamin synthesis protein/P47K family protein [Burkholderia
thailandensis E264]
gi|257140625|ref|ZP_05588887.1| cobalamin synthesis protein/P47K family protein [Burkholderia
thailandensis E264]
gi|83653276|gb|ABC37339.1| cobalamin synthesis protein/P47K family protein [Burkholderia
thailandensis E264]
Length = 357
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 164/308 (53%), Gaps = 35/308 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+RGDL + L LA KK+ FD +VIETTGLA P PV +TF D ++
Sbjct: 60 MSNGCICCTIRGDLARALADLAAKKRDGTFDFDRVVIETTGLANPGPVAQTFFIDSEIAD 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLT 117
LD VITLVD+KHA L+E +E V+ QV +ADR+ + K DLV + + L
Sbjct: 120 EFLLDAVITLVDAKHADAQLDE-------HEVVQRQVGFADRLFITKADLVDDEAVSELK 172
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
R+ H+N A +K+ +G D+ + + G++L ++++ +D A HE AH H
Sbjct: 173 HRLLHMNPKAAIKVVNFGDADIKEIFDLRGFNL---NAKLEIDPDFLAEDEHEHAHHHEH 229
Query: 178 GHHHNHMHDSA---------------------VSSVTIVSEGTLDLDEVDDWLERLIEEK 216
GH H H + S ++ D ++++D+L +++
Sbjct: 230 GHDHAHCDHDHGHCEHDHEHGHHHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQIY 289
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
GE + R KG+L + G +++ VFQGVH + W P EK+ NK+VFIG +L +
Sbjct: 290 GERMLRYKGVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPAEKKTNKMVFIGVDLPRDLIT 349
Query: 277 KGFKGCLA 284
G CLA
Sbjct: 350 DGLDACLA 357
>gi|410267862|gb|JAA21897.1| COBW domain containing 1 [Pan troglodytes]
Length = 364
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 160/294 (54%), Gaps = 34/294 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+VR + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 67 LRNGCLCCSVRDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 125
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEA-----VEQVAYADRIILNKIDLVTETELGSL 116
LDG+IT+VDSK+ ++HL + KP ++NEA ++QVA AD I++NK DLV E ++ L
Sbjct: 126 LDGIITIVDSKYGLKHLTQEKPDGLINEATRYSYLKQVALADIILINKTDLVPEEDVKKL 185
Query: 117 TERIKHINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGH 175
I+ IN + + + VD+ VL + +D L I + +
Sbjct: 186 RTTIRSINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------Q 230
Query: 176 HEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGIL 227
H H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++
Sbjct: 231 HVPGTQPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLV 289
Query: 228 SVSGSEQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
S+ QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 290 SIKDKSQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLIGRNLDKDILKQLF 342
>gi|384528014|ref|YP_005419246.1| putative GTP-binding protein YjiA [Rahnella aquatilis HX2]
gi|380756752|gb|AFE61142.1| putative GTP-binding protein YjiA [Rahnella aquatilis HX2]
Length = 323
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 137/281 (48%), Gaps = 29/281 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL---AKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT G+L LL L K + QFD ++IE TG+A P P+++ F E++ +
Sbjct: 60 LSNGCICCTRSGELESALLDLLDSVDKGEVQFDRLIIECTGMADPGPILQAFFAHEVICE 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVITLVD+ HAM L++ A Q+ YADRI+L K D+ E LTE
Sbjct: 120 RYVLDGVITLVDAVHAMSQLDQFP------LAQSQIGYADRILLTKTDV--SGECPELTE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ INA APV G +D + G+ LE E
Sbjct: 172 RLQRINARAPVYKTVQGDIDPALLFDTRGFMLE------------------EDVVAARPL 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + VSS+ + + + L + +E L+ ++L R KG+L ++ + +F
Sbjct: 214 FHRLAPQQNTVSSIVVELDYPVALTAISKVMEELLASFADNLMRYKGMLWIADHPCRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV + W PDE + LVFIG L ET +R F
Sbjct: 274 QGVQRLYSADWDREWLPDETPRSALVFIGMQLPETEIRAAF 314
>gi|410297204|gb|JAA27202.1| COBW domain containing 2 [Pan troglodytes]
Length = 400
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 160/294 (54%), Gaps = 34/294 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+VR + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVRDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEA-----VEQVAYADRIILNKIDLVTETELGSL 116
LDG+IT+VDSK+ ++HL + KP ++NEA ++QVA AD I++NK DLV E ++ L
Sbjct: 162 LDGIITIVDSKYGLKHLTQEKPDGLINEATRYSYLKQVALADIILINKTDLVPEEDVKKL 221
Query: 117 TERIKHINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGH 175
I+ IN + + + VD+ VL + +D L I + +
Sbjct: 222 RTTIRSINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------Q 266
Query: 176 HEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGIL 227
H H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++
Sbjct: 267 HVPGTQPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLV 325
Query: 228 SVSGSEQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
S+ QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 326 SIKDKSQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLIGRNLDKDILKQLF 378
>gi|387791754|ref|YP_006256819.1| putative GTPase, G3E family [Solitalea canadensis DSM 3403]
gi|379654587|gb|AFD07643.1| putative GTPase, G3E family [Solitalea canadensis DSM 3403]
Length = 323
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 147/283 (51%), Gaps = 25/283 (8%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
++NGC+CC++ G+ +L QL K FDH+V+E+TG+A P+ V F D+++ +++
Sbjct: 61 ISNGCICCSMSGEFNDVLAQLIKDVP-VFDHLVVESTGIADPSAVAAAFIGDQIIQSHLR 119
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD VI LVD+++ L E + EA +Q+A++D II+NK DL+TE +L + E +K
Sbjct: 120 LDAVICLVDAQNMETLLKERE------EARKQIAFSDVIIINKTDLITEEQLTRVVEIVK 173
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN A + A G D EV++ N T
Sbjct: 174 KINNYAKIITAVKGEQD-----------------EVNLLNMEAYTTKMVEQGFKFFPIGQ 216
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV 241
HD VS + V + LDL + WL L+ +G+ YR+KG+L+ +G +++++ Q V
Sbjct: 217 QVAHDEVVSQ-SFVFDHPLDLLKFRHWLNVLLVIQGQSFYRIKGVLNFAGLDERHIVQSV 275
Query: 242 HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
+ PG W R +K+VFIG+NL L KG K C +
Sbjct: 276 MNNATYTPGSDWEEGMVRTSKIVFIGKNLRRDLLEKGLKNCYS 318
>gi|350579287|ref|XP_003480575.1| PREDICTED: COBW domain-containing protein 2 [Sus scrofa]
Length = 377
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 149/288 (51%), Gaps = 46/288 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 104 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAALGVDIY 162
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD II+NK DLV+E +L L I+
Sbjct: 163 LDGIITVVDSKYGLKHLAEEKPDGLINEASRQVALADIIIINKTDLVSEEDLNKLRTTIR 222
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + S+ H + H
Sbjct: 223 SINGLGKILETQRSSLQKKL-------------------------QHMSTTQPH------ 251
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
D ++ +VT G + ++ +++ LI EK ++ R+KG++S+
Sbjct: 252 ---ADQSIVTVTFEVPGNAKEESLNVYIQNLIWEKNVSNRDGNCMEVIRLKGLISIRDKP 308
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+L+ IGRNLD+ L++ F
Sbjct: 309 QQVIVQGVHELYDLEETP-VSWKDDTERTNRLILIGRNLDKDILKQLF 355
>gi|322835563|ref|YP_004215589.1| cobalamin synthesis protein P47K [Rahnella sp. Y9602]
gi|321170764|gb|ADW76462.1| cobalamin synthesis protein P47K [Rahnella sp. Y9602]
Length = 323
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 137/281 (48%), Gaps = 29/281 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL---AKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT G+L LL L K + QFD ++IE TG+A P P+++ F E++ +
Sbjct: 60 LSNGCICCTRSGELESALLDLLDSVDKGEVQFDRLIIECTGMADPGPILQAFFAHEVICE 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVITLVD+ HAM L++ A Q+ YADRI+L K D+ E LTE
Sbjct: 120 RYVLDGVITLVDAVHAMSQLDQFP------LAQSQIGYADRILLTKTDV--SGECPELTE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ INA APV G +D + G+ LE E
Sbjct: 172 RLQRINARAPVYKTVQGDIDPALLFDTRGFMLE------------------EDVVAARPL 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + VSS+ + + + L + +E L+ ++L R KG+L ++ + +F
Sbjct: 214 FHRLAPQQNTVSSIVVELDYPVALTAISKVMEELLASFADNLMRYKGMLWIADHPCRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV + W PDE + LVFIG L ET +R F
Sbjct: 274 QGVQRLYSADWDREWLPDETPRSALVFIGMQLPETEIRAAF 314
>gi|426220368|ref|XP_004004388.1| PREDICTED: COBW domain-containing protein 2 isoform 2 [Ovis aries]
Length = 379
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 151/288 (52%), Gaps = 46/288 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L KKK G+FD+I++ETTGLA P V F D + +
Sbjct: 106 LRNGCLCCSVKDNGLRAIENLMKKK-GKFDYILLETTGLADPGAVASMFWVDAELGVDIY 164
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD IILNK DLV+E +L L I+
Sbjct: 165 LDGIITVVDSKYGLKHLAEEKPDGLINEASRQVALADIIILNKTDLVSEEDLNKLRTTIR 224
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + LE S + H T
Sbjct: 225 SINGLGKI--------------------LETQRSSLQKKLQHVPTTQP------------ 252
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
H+ D ++ +VT G + + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 253 -HL-DQSIITVTFEVPGNAEEESLNVYIQNLLWEKNVRNRDDDCMEVIRLKGLVSIKDKP 310
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P W D +R N+LV IGRNLD+ L++ F
Sbjct: 311 QQVIVQGVHELYDLEETPVN-WEDDSERTNRLVLIGRNLDKDILKQLF 357
>gi|354598699|ref|ZP_09016716.1| cobalamin synthesis protein P47K [Brenneria sp. EniD312]
gi|353676634|gb|EHD22667.1| cobalamin synthesis protein P47K [Brenneria sp. EniD312]
Length = 321
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 148/281 (52%), Gaps = 29/281 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT +L LL L FDH++IE TG+A P PV +TF + E++ Q
Sbjct: 61 LSNGCICCTQSNELEDALLDLLDGVDNGALDFDHLIIECTGMADPGPVAQTFFSHEVICQ 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA Q L++ F + +A Q+ YADRI+L K D+ E + +L +
Sbjct: 121 RFVLDGIITLVDAVHARQQLDQ----FTIAQA--QIGYADRILLTKTDIAGEDD--ALIQ 172
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ INA AP+ LA G +D+ + + G+ L N A + +
Sbjct: 173 RLQRINARAPLYLAVNGEIDLSLLFNIEGFML----------NDRLALN---APVFRFIA 219
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
N++ A+S T V G V D +E + ++L R KGIL++ ++ +F
Sbjct: 220 PAQNNVQSIAISFSTPVELGA-----VSDLMESFLVNYADNLLRYKGILAIKDDSRRLLF 274
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV + W DE R + LVFIGR+L E +R+GF
Sbjct: 275 QGVQRLYSADWDREWRADEARESVLVFIGRDLPEQEIREGF 315
>gi|333925400|ref|YP_004498979.1| cobalamin synthesis protein P47K [Serratia sp. AS12]
gi|333930353|ref|YP_004503931.1| cobalamin synthesis protein P47K [Serratia plymuthica AS9]
gi|386327224|ref|YP_006023394.1| cobalamin synthesis protein P47K [Serratia sp. AS13]
gi|333471960|gb|AEF43670.1| cobalamin synthesis protein P47K [Serratia plymuthica AS9]
gi|333489460|gb|AEF48622.1| cobalamin synthesis protein P47K [Serratia sp. AS12]
gi|333959557|gb|AEG26330.1| cobalamin synthesis protein P47K [Serratia sp. AS13]
Length = 320
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 151/283 (53%), Gaps = 27/283 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL---AKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CC+ +L LL L + Q +FD ++IE TG+A P P+ +TF + EL+ +
Sbjct: 60 LSNGCICCSKANELADALLDLLDGVDQGQLEFDRLIIECTGMADPGPITQTFFSHELICE 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA Q LN+ F + +A QV YADRI+L K D+ + E +LT+
Sbjct: 120 RFLLDGIITLVDAAHADQQLNQ----FSIAQA--QVGYADRILLTKTDVAPDCE--ALTQ 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ +NA APV +G +D+ + G+ G+ L N
Sbjct: 172 RLQLMNARAPVYTVTHGDIDLSLLFGIEGFTL----------NDRLNLTPPAPLFRRIPQ 221
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+N + S+ + + L+L ++ + +E L+ E + L R KGILS+ ++ +F
Sbjct: 222 PQNN------IRSIVVYHDQPLELMQISEVMEGLLLEYADSLLRYKGILSIKDEPRRLLF 275
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + + W P+E+R + LVFIG +L E +R F
Sbjct: 276 QGVQRLYNADWDREWLPEEERRSTLVFIGVDLPEEEIRGRFAA 318
>gi|331650484|ref|ZP_08351556.1| putative cobalamin synthesis protein [Escherichia coli M605]
gi|417660578|ref|ZP_12310159.1| putative metal chaperone [Escherichia coli AA86]
gi|330909796|gb|EGH38306.1| putative metal chaperone [Escherichia coli AA86]
gi|331040878|gb|EGI13036.1| putative cobalamin synthesis protein [Escherichia coli M605]
Length = 318
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 143/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ HINA APV +G +D+ + G+ LE E+
Sbjct: 172 RLAHINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|226372128|gb|ACO51689.1| COBW domain-containing protein 1 [Rana catesbeiana]
Length = 356
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 162/291 (55%), Gaps = 28/291 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + +K + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 83 LRNGCLCCSVKDNGLKAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 141
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG++++VD+K+A+QHL E KP ++NEA QVA AD I++NK D+V+ +L ++ ++
Sbjct: 142 LDGIVSVVDAKYALQHLTEEKPGDLINEAARQVALADVILINKTDIVSVEDLNAVHSVVR 201
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + VD+ +L + +D + + D T H
Sbjct: 202 SINGLVKILETQRSRVDLSEILDLHSFD--SLSGKSLQDKFISNT-------------SH 246
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
NH+ D ++ +VT G + + ++ +++ L+ EK ++ R+KG+LS++
Sbjct: 247 NHL-DKSIVTVTFEVVGNVIEENLNVFIQNLLWEKNIKNTNGFHMEVIRLKGLLSMNDKS 305
Query: 234 QQYVFQGVHSTLDGCPGKA-WGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
Q + QGVH D + W + R+N++VFIGR+LD+ L++ F L
Sbjct: 306 NQVIIQGVHELYDLEETQVNWQGE--RLNRMVFIGRHLDKDILKQKFLSAL 354
>gi|410227936|gb|JAA11187.1| COBW domain containing 2 [Pan troglodytes]
Length = 400
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 159/294 (54%), Gaps = 34/294 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+VR + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVRDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEA-----VEQVAYADRIILNKIDLVTETELGSL 116
LDG+IT+VDSK+ ++HL + KP ++NEA + QVA AD I++NK DLV E ++ L
Sbjct: 162 LDGIITIVDSKYGLKHLTQEKPDGLINEATKYSYLRQVALADIILINKTDLVPEEDVKKL 221
Query: 117 TERIKHINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGH 175
I+ IN + + + VD+ VL + +D L I + +
Sbjct: 222 RTTIRSINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------Q 266
Query: 176 HEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGIL 227
H H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++
Sbjct: 267 HVPGTQPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLV 325
Query: 228 SVSGSEQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
S+ QQ + QGVH L+ P +W D +R N+LV +GRNLD+ L++ F
Sbjct: 326 SIKDKSQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLLGRNLDKDILKQLF 378
>gi|270265146|ref|ZP_06193409.1| putative GTP-binding protein YjiA [Serratia odorifera 4Rx13]
gi|270041080|gb|EFA14181.1| putative GTP-binding protein YjiA [Serratia odorifera 4Rx13]
Length = 320
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 153/283 (54%), Gaps = 27/283 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL---AKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CC+ +L LL L Q FD ++IE TG+A P P+ +TF + EL+ +
Sbjct: 60 LSNGCICCSKANELADALLDLLDGVDSGQLAFDRLIIECTGMADPGPITQTFFSHELICE 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA Q LN+ F + +A QV YADRI+L K D+ + E +LT+
Sbjct: 120 RFLLDGIITLVDAAHADQQLNQ----FSIAQA--QVGYADRILLTKTDVAPDCE--ALTQ 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ +NA APV +G +D+ + G+ G+ L ++ + A ++
Sbjct: 172 RLQLMNARAPVYTVTHGDIDLSLLFGIEGFTLND-----RLNLTPPAPLFRRIPQPQND- 225
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+ S+ + + L+L ++ + +E L+ E + L R KGILS+ ++ +F
Sbjct: 226 ----------IRSIVVYHDQPLELMQISEVMEGLLLEYADSLLRYKGILSIRDEPRRLLF 275
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + + W P+E+R + LVFIG +L E +R+ G
Sbjct: 276 QGVQRLYNADWDREWLPEEERRSTLVFIGVDLPEEEIRQRIGG 318
>gi|359068146|ref|XP_003586436.1| PREDICTED: COBW domain-containing protein 2 isoform 3 [Bos taurus]
Length = 379
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 151/288 (52%), Gaps = 46/288 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L KKK G+FD+I++ETTGLA P V F D + +
Sbjct: 106 LRNGCLCCSVKDNGLRAIENLMKKK-GKFDYILLETTGLADPGAVASMFWVDAELGVDIY 164
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD II+NK DLV+E +L L ++
Sbjct: 165 LDGIITVVDSKYGLKHLAEEKPDGLINEASRQVALADIIIINKTDLVSEEDLNKLRTTVR 224
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + LE S + H T
Sbjct: 225 SINGLGKI--------------------LETQRSSLQKKLQHVPTTQP------------ 252
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
H+ D ++ +VT G + + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 253 -HL-DQSIITVTFEVPGNAEEESLNVYIQNLLWEKNVRNRDDACMEVIRLKGLVSIKDKP 310
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P W D +R N+LV IGRNLD+ L++ F
Sbjct: 311 QQVIVQGVHELYDLEETPVN-WEDDSERTNRLVLIGRNLDKDILKQLF 357
>gi|358413475|ref|XP_003582578.1| PREDICTED: COBW domain-containing protein 2 isoform 2 [Bos taurus]
Length = 379
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 151/288 (52%), Gaps = 46/288 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L KKK G+FD+I++ETTGLA P V F D + +
Sbjct: 106 LRNGCLCCSVKDNGLRAIENLMKKK-GKFDYILLETTGLADPGAVASMFWVDAELGVDIY 164
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD II+NK DLV+E +L L ++
Sbjct: 165 LDGIITVVDSKYGLKHLAEEKPDGLINEASRQVALADIIIINKTDLVSEEDLNKLRTTVR 224
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + LE S + H T
Sbjct: 225 SINGLGKI--------------------LETQRSSLQKKLQHVPTTQP------------ 252
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
H+ D ++ +VT G + + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 253 -HL-DQSIITVTFEVPGNAEEESLNVYIQNLLWEKNVRNRDDACMEVIRLKGLVSIKDKP 310
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P W D +R N+LV IGRNLD+ L++ F
Sbjct: 311 QQVIVQGVHELYDLEETPVN-WEDDSERTNRLVLIGRNLDKDILKQLF 357
>gi|432439285|ref|ZP_19681651.1| GTPase [Escherichia coli KTE189]
gi|432444410|ref|ZP_19686722.1| GTPase [Escherichia coli KTE191]
gi|432546264|ref|ZP_19783077.1| GTPase [Escherichia coli KTE236]
gi|432546670|ref|ZP_19783470.1| GTPase [Escherichia coli KTE237]
gi|432624859|ref|ZP_19860859.1| GTPase [Escherichia coli KTE76]
gi|433016739|ref|ZP_20205048.1| GTPase [Escherichia coli KTE104]
gi|433026321|ref|ZP_20214275.1| GTPase [Escherichia coli KTE106]
gi|430969997|gb|ELC87083.1| GTPase [Escherichia coli KTE189]
gi|430976885|gb|ELC93737.1| GTPase [Escherichia coli KTE191]
gi|431068433|gb|ELD76911.1| GTPase [Escherichia coli KTE236]
gi|431086482|gb|ELD92504.1| GTPase [Escherichia coli KTE237]
gi|431153272|gb|ELE54187.1| GTPase [Escherichia coli KTE76]
gi|431524807|gb|ELI01631.1| GTPase [Escherichia coli KTE104]
gi|431527748|gb|ELI04462.1| GTPase [Escherichia coli KTE106]
Length = 318
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + E +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELEYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|9797748|gb|AAF98566.1|AC013427_9 Contains similarity to cobW protein from Rhodobacter capsulatus
gi|7448322 [Arabidopsis thaliana]
Length = 354
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 141/266 (53%), Gaps = 35/266 (13%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CCTV+ LV+ L QL ++K + DHI++ETTGLA PAP+ D+ + VKLD
Sbjct: 106 NGCVCCTVKHSLVQALEQLVQRK-DRLDHILLETTGLANPAPLASILWLDDQLESEVKLD 164
Query: 64 GVITL----VDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTER 119
++TL VD+K+ LNE + EA Q+A+AD II+NK+DL+++ E L +
Sbjct: 165 CIVTLLEQVVDAKNLRFQLNERRDSSSFPEAFNQIAFADTIIMNKVDLISQEESDELEKE 224
Query: 120 IKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGH 179
I IN++A V + V + R++S + + S T
Sbjct: 225 IHSINSLANV------------IRSVRCQHVSRLESLLEANKSLTTT------------- 259
Query: 180 HHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGE--DLYRMKGILSVSGSEQQYV 237
+HDS V ++ I ++LD+V WLE ++ +K D+YR K +LS+ S+Q ++
Sbjct: 260 ---DLHDSGVRTLCISEPQPINLDKVRLWLEEILWDKKSEMDVYRCKAVLSIQNSDQMHI 316
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKL 263
Q V + P + W +E R NK+
Sbjct: 317 LQAVRDIYEIVPARKWSEEENRTNKI 342
>gi|421844569|ref|ZP_16277726.1| GTP-binding protein YjiA [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|411774048|gb|EKS57558.1| GTP-binding protein YjiA [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|455643546|gb|EMF22670.1| GTP-binding protein YjiA [Citrobacter freundii GTC 09479]
Length = 318
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 145/283 (51%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CCT +L LL L K FD +VIE TG+A P P+I+TF + E++ +
Sbjct: 60 LTNGCICCTRSSELEDALLDLLDNLDKGTINFDRLVIECTGMADPGPIIQTFFSHEVICE 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + ++ QV YADRI+L K D+ E+E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTIAQS--QVGYADRILLTKTDVAGESE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLSLLFDTNGFMLE------------------ENVVSAKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +++ +V +E L+ E E L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVNISDVSRVMENLLLESAEKLLRYKGMLWIEGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DE+ ++LVFIG NL E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEQPYSQLVFIGINLPEDEIRAAFAG 315
>gi|417631860|ref|ZP_12282086.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
STEC_MHI813]
gi|345368011|gb|EGX00018.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
STEC_MHI813]
Length = 318
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 143/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E+ L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAEI--LRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 315
>gi|421781447|ref|ZP_16217913.1| hypothetical protein B194_0496 [Serratia plymuthica A30]
gi|407756351|gb|EKF66468.1| hypothetical protein B194_0496 [Serratia plymuthica A30]
Length = 320
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 150/283 (53%), Gaps = 27/283 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL---AKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CC+ +L LL L Q +FD ++IE TG+A P P+ +TF + EL+ +
Sbjct: 60 LSNGCICCSKANELADALLDLLDGVDSGQLEFDRLIIECTGMADPGPITQTFFSHELICE 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA Q LN+ F + +A QV YADRI+L+K D+ + E +L +
Sbjct: 120 RFLLDGIITLVDAAHADQQLNQ----FSIAQA--QVGYADRILLSKTDVAPDCE--ALIQ 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ +NA APV +G +D+ + G+ G+ L N
Sbjct: 172 RLQLMNARAPVYTVTHGDIDLSLLFGIEGFTL----------NDRLNLTPPAPLFRRIPQ 221
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+N + S+ + + L+L ++ + +E L+ E + L R KGILS+ ++ +F
Sbjct: 222 PQNN------IRSIVVYHDQPLELMQISEVMEGLLLEYADSLLRYKGILSIKDEPRRLLF 275
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + + W P+E+R + LVFIG +L E +R F
Sbjct: 276 QGVQRLYNADWDREWLPEEERRSTLVFIGVDLPEEEIRGRFAA 318
>gi|163796167|ref|ZP_02190129.1| Putative GTPase [alpha proteobacterium BAL199]
gi|159178626|gb|EDP63166.1| Putative GTPase [alpha proteobacterium BAL199]
Length = 378
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/323 (33%), Positives = 158/323 (48%), Gaps = 54/323 (16%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQLAKKKQ----GQFDHIVIETTGLAKPAPVIETFCTDELV 56
++ +GCLCCTVRGDL+ L L K+K FD IVIETTGLA PAP++ T +D +
Sbjct: 67 LLASGCLCCTVRGDLLDTLKSLYKRKSKGEIAPFDRIVIETTGLADPAPILHTMMSDGFL 126
Query: 57 SQYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSL 116
LDGVI +VD+ +A L++ +F E+V+QVA ADRI+L+K DLV + +L
Sbjct: 127 VTRFTLDGVIAVVDAVNAPWQLDQ---QF---ESVKQVAVADRIVLSKTDLVEPAAIAAL 180
Query: 117 TERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHH 176
R++ IN APV A G+++ + G Y+ S+V E A+
Sbjct: 181 EARLQAINPAAPVLQAISGAIEPSALFDAGLYNPMTKSSDVQ-------RWLKEEAYRDT 233
Query: 177 EGHHHN---------------------------------HMHDSAVSSVTIVSEGTLDLD 203
EGH +N + HD + + + + +
Sbjct: 234 EGHVYNRPGEHDHGHDHSHGHDHRHGHDEHGHDHHRHDVNRHDDHIRAFCLTFDKPFAWN 293
Query: 204 EVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGK--AWGPDEKRIN 261
+ L+ L++ G +L RMKGIL+V E+ V V L P K AW PD+ R +
Sbjct: 294 AIAPALDMLVQSHGLNLLRMKGILNVQEVEKPVVVHAVQH-LFHPPAKLDAW-PDDDRRS 351
Query: 262 KLVFIGRNLDETALRKGFKGCLA 284
KLV I R+L++ A+ + LA
Sbjct: 352 KLVIIARDLEKDAVERILNSYLA 374
>gi|293408038|ref|ZP_06651878.1| conserved hypothetical protein [Escherichia coli B354]
gi|291472289|gb|EFF14771.1| conserved hypothetical protein [Escherichia coli B354]
Length = 318
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 143/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G++D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGNIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDKIRAAFAG 315
>gi|194434851|ref|ZP_03067099.1| CobW/P47K family protein [Shigella dysenteriae 1012]
gi|417675678|ref|ZP_12325097.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
dysenteriae 155-74]
gi|420350365|ref|ZP_14851722.1| hypothetical protein SB96558_5343 [Shigella boydii 965-58]
gi|194416914|gb|EDX33035.1| CobW/P47K family protein [Shigella dysenteriae 1012]
gi|332083762|gb|EGI88980.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
dysenteriae 155-74]
gi|391263048|gb|EIQ22059.1| hypothetical protein SB96558_5343 [Shigella boydii 965-58]
Length = 318
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 143/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P+P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPSPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 315
>gi|416901059|ref|ZP_11930191.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
STEC_7v]
gi|417118197|ref|ZP_11968773.1| CobW/P47K family protein [Escherichia coli 1.2741]
gi|422802037|ref|ZP_16850532.1| CobW/HypB/UreG [Escherichia coli M863]
gi|323965462|gb|EGB60917.1| CobW/HypB/UreG [Escherichia coli M863]
gi|327250270|gb|EGE61989.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
STEC_7v]
gi|386138621|gb|EIG79780.1| CobW/P47K family protein [Escherichia coli 1.2741]
Length = 318
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 143/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G++D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGNIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|306815455|ref|ZP_07449604.1| putative GTP-binding protein YjiA [Escherichia coli NC101]
gi|432384503|ref|ZP_19627416.1| GTPase [Escherichia coli KTE15]
gi|432385273|ref|ZP_19628176.1| GTPase [Escherichia coli KTE16]
gi|432516837|ref|ZP_19754046.1| GTPase [Escherichia coli KTE224]
gi|432614494|ref|ZP_19850640.1| GTPase [Escherichia coli KTE72]
gi|432644356|ref|ZP_19880163.1| GTPase [Escherichia coli KTE86]
gi|432653990|ref|ZP_19889712.1| GTPase [Escherichia coli KTE93]
gi|432701965|ref|ZP_19937103.1| GTPase [Escherichia coli KTE169]
gi|432748495|ref|ZP_19983146.1| GTPase [Escherichia coli KTE43]
gi|432902248|ref|ZP_20111996.1| GTPase [Escherichia coli KTE194]
gi|432941642|ref|ZP_20139140.1| GTPase [Escherichia coli KTE183]
gi|432970082|ref|ZP_20158965.1| GTPase [Escherichia coli KTE207]
gi|432983669|ref|ZP_20172412.1| GTPase [Escherichia coli KTE215]
gi|433036873|ref|ZP_20224501.1| GTPase [Escherichia coli KTE113]
gi|433085484|ref|ZP_20271909.1| GTPase [Escherichia coli KTE133]
gi|433099485|ref|ZP_20285607.1| GTPase [Escherichia coli KTE145]
gi|433147072|ref|ZP_20332183.1| GTPase [Escherichia coli KTE168]
gi|433191269|ref|ZP_20375336.1| GTPase [Escherichia coli KTE88]
gi|305851117|gb|EFM51572.1| putative GTP-binding protein YjiA [Escherichia coli NC101]
gi|430901726|gb|ELC23622.1| GTPase [Escherichia coli KTE15]
gi|430911395|gb|ELC32682.1| GTPase [Escherichia coli KTE16]
gi|431035889|gb|ELD47267.1| GTPase [Escherichia coli KTE224]
gi|431145116|gb|ELE46789.1| GTPase [Escherichia coli KTE72]
gi|431185360|gb|ELE85089.1| GTPase [Escherichia coli KTE86]
gi|431196038|gb|ELE94983.1| GTPase [Escherichia coli KTE93]
gi|431238998|gb|ELF33653.1| GTPase [Escherichia coli KTE169]
gi|431288114|gb|ELF78898.1| GTPase [Escherichia coli KTE43]
gi|431438377|gb|ELH19751.1| GTPase [Escherichia coli KTE194]
gi|431456243|gb|ELH36587.1| GTPase [Escherichia coli KTE183]
gi|431487904|gb|ELH67546.1| GTPase [Escherichia coli KTE207]
gi|431508076|gb|ELH86351.1| GTPase [Escherichia coli KTE215]
gi|431556981|gb|ELI30755.1| GTPase [Escherichia coli KTE113]
gi|431595891|gb|ELI65877.1| GTPase [Escherichia coli KTE133]
gi|431624302|gb|ELI92922.1| GTPase [Escherichia coli KTE145]
gi|431654558|gb|ELJ21607.1| GTPase [Escherichia coli KTE168]
gi|431699338|gb|ELJ64343.1| GTPase [Escherichia coli KTE88]
Length = 318
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAAHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|332667786|ref|YP_004450574.1| cobalamin synthesis protein P47K [Haliscomenobacter hydrossis DSM
1100]
gi|332336600|gb|AEE53701.1| cobalamin synthesis protein P47K [Haliscomenobacter hydrossis DSM
1100]
Length = 331
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 151/281 (53%), Gaps = 23/281 (8%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGC+CC++ G+L++ L QL + FDH++IETTG+A+P V +F +D + +LD
Sbjct: 72 NGCICCSLNGELIETLRQLLDSGK-VFDHLIIETTGMAEPDAVALSFVSDPGIQAEFQLD 130
Query: 64 GVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIKHI 123
G + LVD+ + L E + EAV+Q+ +AD I++NK + V E L +L ++ +
Sbjct: 131 GTVCLVDAVSGQETLLERE------EAVKQITFADCIVINKANDVQEHYLAALQSNLREM 184
Query: 124 NAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHHNH 183
N +A + A YG + + +L + Y+ ++ ++ +S G HHH+H
Sbjct: 185 NPLAQITTANYGRTEAN-LLHLQAYEAGELEQKI------------KSVVGDSPTHHHHH 231
Query: 184 MHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHS 243
S V++ + + DL W + L+ +G+++YR+KGIL V + VFQ V +
Sbjct: 232 ---SDVAAHSFTFDQPFDLLAFIHWSKVLLMIQGKNIYRIKGILDVGNENAKMVFQSVRT 288
Query: 244 TLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
W +E R++++V IG+NL AL K + CL+
Sbjct: 289 QSAFTRAGDWPENEPRLSRIVIIGKNLKREALEKALRSCLS 329
>gi|187733879|ref|YP_001883007.1| putative GTP-binding protein YjiA [Shigella boydii CDC 3083-94]
gi|187430871|gb|ACD10145.1| CobW/P47K family protein [Shigella boydii CDC 3083-94]
Length = 318
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDIAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|301089428|ref|XP_002895015.1| cobalamin synthesis protein, putative [Phytophthora infestans
T30-4]
gi|262103997|gb|EEY62049.1| cobalamin synthesis protein, putative [Phytophthora infestans
T30-4]
Length = 397
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 165/312 (52%), Gaps = 38/312 (12%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
++NGC+CC+VR DLV L +L ++ Q +FD+IV+ETTG+A P V F D+ + +
Sbjct: 90 LSNGCVCCSVRDDLVNTLEKLLER-QDRFDYIVVETTGMADPGKVASVFWVDDELEGRIF 148
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELG-SLTERI 120
LDG++TLVD+ HL + EA Q+AYADRI+LNK DLV + E ++ +++
Sbjct: 149 LDGIVTLVDAPRLNFHLKHPDTQ---REASAQLAYADRILLNKSDLVPDKEQRLAIEKKV 205
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLER---IDSEVHVDNSHCATHHHESAHGHHE 177
N MA V+ A+ V++ +L + + R ++ E+H T E H H +
Sbjct: 206 TQANGMASVRWAERSRVELGDILNIKSFTTSRAAQVEKELHT----LLTEGKEEDHDHED 261
Query: 178 GHHH---NHMHDSAVSSVTI-VSEGTLDLDEVDDWLERLIEEKG---------------- 217
+ N H + + + + +G L D+++ WL L+ E+G
Sbjct: 262 CNEESDVNATHTGGMQTTCVRIRDGLLGRDKLERWLGELLWEQGKAVGAEIQPGSEAATR 321
Query: 218 EDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKA-WGPD-----EKRINKLVFIGRNLD 271
++L+R+KG+++V+G +++V Q VH + + W D E + ++VFIG +L
Sbjct: 322 QELFRVKGVVAVAGEPKKFVLQAVHELFEVYASEEDWTEDELNCKESLVTQVVFIGLHLR 381
Query: 272 ETALRKGFKGCL 283
++ L G + C+
Sbjct: 382 KSELEAGLRSCV 393
>gi|110808130|ref|YP_691650.1| GTP-binding protein YjiA [Shigella flexneri 5 str. 8401]
gi|384545892|ref|YP_005729956.1| putative GTPase [Shigella flexneri 2002017]
gi|415860069|ref|ZP_11534143.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
flexneri 2a str. 2457T]
gi|417700130|ref|ZP_12349278.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
flexneri K-218]
gi|417720921|ref|ZP_12369776.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
flexneri K-304]
gi|417731400|ref|ZP_12380077.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
flexneri K-671]
gi|417741303|ref|ZP_12389864.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
flexneri 4343-70]
gi|417741411|ref|ZP_12389968.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
flexneri 2930-71]
gi|418260643|ref|ZP_12883114.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
flexneri 6603-63]
gi|420344879|ref|ZP_14846333.1| hypothetical protein SFK404_5558 [Shigella flexneri K-404]
gi|420378015|ref|ZP_14877543.1| hypothetical protein SF123566_7646 [Shigella flexneri 1235-66]
gi|424840496|ref|ZP_18265133.1| putative GTP-binding protein YjiA [Shigella flexneri 5a str. M90T]
gi|110617678|gb|ABF06345.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|281603679|gb|ADA76663.1| putative GTPase [Shigella flexneri 2002017]
gi|313646309|gb|EFS10771.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
flexneri 2a str. 2457T]
gi|332748845|gb|EGJ79269.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
flexneri 4343-70]
gi|332749095|gb|EGJ79518.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
flexneri K-671]
gi|332768716|gb|EGJ98895.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
flexneri 2930-71]
gi|333009388|gb|EGK28844.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
flexneri K-218]
gi|333022290|gb|EGK41528.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
flexneri K-304]
gi|383469548|gb|EID64569.1| putative GTP-binding protein YjiA [Shigella flexneri 5a str. M90T]
gi|391260532|gb|EIQ19590.1| hypothetical protein SFK404_5558 [Shigella flexneri K-404]
gi|391292246|gb|EIQ50583.1| hypothetical protein SF123566_7646 [Shigella flexneri 1235-66]
gi|397893296|gb|EJL09756.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
flexneri 6603-63]
Length = 318
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 LYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 315
>gi|432356251|ref|ZP_19599500.1| GTPase [Escherichia coli KTE4]
gi|430880269|gb|ELC03584.1| GTPase [Escherichia coli KTE4]
Length = 318
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 143/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F+G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFEG 315
>gi|149197618|ref|ZP_01874668.1| hypothetical protein LNTAR_20333 [Lentisphaera araneosa HTCC2155]
gi|149139188|gb|EDM27591.1| hypothetical protein LNTAR_20333 [Lentisphaera araneosa HTCC2155]
Length = 329
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 102/283 (36%), Positives = 155/283 (54%), Gaps = 19/283 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGCLCCTV+GDL K+LL L ++ +FD IVIETTGLA PAPV E D V++
Sbjct: 63 LNNGCLCCTVKGDLTKILLNLLSCEK-EFDQIVIETTGLADPAPVAELIYFDSHVNKRFY 121
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG++T+ D + V E ++Q+ YAD+++LNK+DLV +L R+K
Sbjct: 122 LDGIVTVFDCAN-------VDSVLETPEGLKQLIYADKVLLNKMDLVEGFDLA----RLK 170
Query: 122 HINAMAPVKLAKYGSV-DMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
+N +A + G V D+ +L GG+ R+D + +H H H H
Sbjct: 171 ILNPLADYEETVKGEVSDLAALLEQGGF---RVDLKALQGETHHNRDHSHDHDHSHNHDH 227
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
+ S ++S++I +G+L+ W+ + + + +YRMKGI+++SG + VFQ
Sbjct: 228 SHSHEHSDMASLSICKKGSLNNGAFRQWIGASLFDTSQVIYRMKGIVNLSGVKGSTVFQS 287
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
VH + + D K N++VFIG+ L+E LRKGF C
Sbjct: 288 VHRLFE---DEVAEKDYKDENRIVFIGKKLNEEKLRKGFFACF 327
>gi|30065583|ref|NP_839754.1| GTP-binding protein YjiA [Shigella flexneri 2a str. 2457T]
gi|56480593|ref|NP_710079.2| GTP-binding protein YjiA [Shigella flexneri 2a str. 301]
gi|30043847|gb|AAP19566.1| hypothetical protein S4640 [Shigella flexneri 2a str. 2457T]
gi|56384144|gb|AAN45786.2| conserved hypothetical protein [Shigella flexneri 2a str. 301]
Length = 284
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 26 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 85
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 86 LYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 137
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 138 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 179
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 180 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 239
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 240 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 281
>gi|432872358|ref|ZP_20092237.1| GTPase [Escherichia coli KTE147]
gi|431406672|gb|ELG89892.1| GTPase [Escherichia coli KTE147]
Length = 318
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLALLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 315
>gi|386632363|ref|YP_006152083.1| putative GTP-binding protein YjiA [Escherichia coli str. 'clone D
i2']
gi|386637283|ref|YP_006157002.1| putative GTP-binding protein YjiA [Escherichia coli str. 'clone D
i14']
gi|355423262|gb|AER87459.1| putative GTP-binding protein YjiA [Escherichia coli str. 'clone D
i2']
gi|355428182|gb|AER92378.1| putative GTP-binding protein YjiA [Escherichia coli str. 'clone D
i14']
Length = 346
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 88 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 147
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 148 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 199
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 200 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 241
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 242 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 301
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 302 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 343
>gi|386622136|ref|YP_006141716.1| Putative metal chaperone [Escherichia coli NA114]
gi|417088730|ref|ZP_11955277.1| putative GTP-binding protein YjiA [Escherichia coli cloneA_i1]
gi|419942691|ref|ZP_14459283.1| putative GTP-binding protein YjiA [Escherichia coli HM605]
gi|432510180|ref|ZP_19749041.1| GTPase [Escherichia coli KTE220]
gi|432556968|ref|ZP_19793666.1| GTPase [Escherichia coli KTE49]
gi|432581137|ref|ZP_19817557.1| GTPase [Escherichia coli KTE57]
gi|432595781|ref|ZP_19832075.1| GTPase [Escherichia coli KTE62]
gi|432649316|ref|ZP_19885086.1| GTPase [Escherichia coli KTE87]
gi|432781836|ref|ZP_20016023.1| GTPase [Escherichia coli KTE63]
gi|432998121|ref|ZP_20186673.1| GTPase [Escherichia coli KTE223]
gi|433123547|ref|ZP_20309147.1| GTPase [Escherichia coli KTE160]
gi|433142162|ref|ZP_20327380.1| GTPase [Escherichia coli KTE167]
gi|433147365|ref|ZP_20332454.1| GTPase [Escherichia coli KTE174]
gi|442607104|ref|ZP_21021897.1| predicted GTPase [Escherichia coli Nissle 1917]
gi|333972637|gb|AEG39442.1| Putative metal chaperone [Escherichia coli NA114]
gi|355348932|gb|EHF98148.1| putative GTP-binding protein YjiA [Escherichia coli cloneA_i1]
gi|388422759|gb|EIL82319.1| putative GTP-binding protein YjiA [Escherichia coli HM605]
gi|431032695|gb|ELD45402.1| GTPase [Escherichia coli KTE220]
gi|431095427|gb|ELE01044.1| GTPase [Escherichia coli KTE49]
gi|431123709|gb|ELE26445.1| GTPase [Escherichia coli KTE57]
gi|431134992|gb|ELE36926.1| GTPase [Escherichia coli KTE62]
gi|431194602|gb|ELE93817.1| GTPase [Escherichia coli KTE87]
gi|431332729|gb|ELG19950.1| GTPase [Escherichia coli KTE63]
gi|431516550|gb|ELH94155.1| GTPase [Escherichia coli KTE223]
gi|431651122|gb|ELJ18388.1| GTPase [Escherichia coli KTE160]
gi|431653256|gb|ELJ20367.1| GTPase [Escherichia coli KTE167]
gi|431679861|gb|ELJ45740.1| GTPase [Escherichia coli KTE174]
gi|441711853|emb|CCQ07874.1| predicted GTPase [Escherichia coli Nissle 1917]
Length = 318
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVISTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 315
>gi|26251233|ref|NP_757273.1| GTP-binding protein YjiA [Escherichia coli CFT073]
gi|237704088|ref|ZP_04534569.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|386707563|ref|YP_006171410.1| Putative GTPase [Escherichia coli P12b]
gi|26111666|gb|AAN83847.1|AE016772_25 Hypothetical protein yjiA [Escherichia coli CFT073]
gi|226902000|gb|EEH88259.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|383105731|gb|AFG43240.1| Putative GTPase [Escherichia coli P12b]
Length = 331
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 143/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 73 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 132
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + ++ QV YADRI+L K D+ E E L E
Sbjct: 133 RYLLDGVIALVDAVHADEQMNQ----FTIAQS--QVGYADRILLTKTDVAGEAE--KLRE 184
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 185 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 226
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 227 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 286
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 287 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 328
>gi|15804925|ref|NP_290967.1| GTP-binding protein YjiA [Escherichia coli O157:H7 str. EDL933]
gi|12519371|gb|AAG59534.1|AE005666_6 hypothetical protein Z5951 [Escherichia coli O157:H7 str. EDL933]
gi|13364789|dbj|BAB38734.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|209749158|gb|ACI72886.1| hypothetical protein ECs5311 [Escherichia coli]
gi|209749160|gb|ACI72887.1| hypothetical protein ECs5311 [Escherichia coli]
gi|209749162|gb|ACI72888.1| hypothetical protein ECs5311 [Escherichia coli]
gi|209749164|gb|ACI72889.1| hypothetical protein ECs5311 [Escherichia coli]
gi|209749166|gb|ACI72890.1| hypothetical protein ECs5311 [Escherichia coli]
Length = 284
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 26 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 85
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 86 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 137
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 138 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 179
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 180 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 239
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 240 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 281
>gi|415795182|ref|ZP_11496869.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
E128010]
gi|323163305|gb|EFZ49134.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
E128010]
Length = 318
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGESNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 315
>gi|38704262|ref|NP_313338.2| GTP-binding protein YjiA [Escherichia coli O157:H7 str. Sakai]
gi|157158071|ref|YP_001465870.1| GTP-binding protein YjiA [Escherichia coli E24377A]
gi|168749489|ref|ZP_02774511.1| CobW/P47K family protein [Escherichia coli O157:H7 str. EC4113]
gi|168754920|ref|ZP_02779927.1| CobW/P47K family protein [Escherichia coli O157:H7 str. EC4401]
gi|168760597|ref|ZP_02785604.1| CobW/P47K family protein [Escherichia coli O157:H7 str. EC4501]
gi|168766631|ref|ZP_02791638.1| CobW/P47K family protein [Escherichia coli O157:H7 str. EC4486]
gi|168773939|ref|ZP_02798946.1| CobW/P47K family protein [Escherichia coli O157:H7 str. EC4196]
gi|168781639|ref|ZP_02806646.1| CobW/P47K family protein [Escherichia coli O157:H7 str. EC4076]
gi|168784993|ref|ZP_02810000.1| CobW/P47K family protein [Escherichia coli O157:H7 str. EC869]
gi|168797922|ref|ZP_02822929.1| CobW/P47K family protein [Escherichia coli O157:H7 str. EC508]
gi|170021698|ref|YP_001726652.1| putative GTP-binding protein YjiA [Escherichia coli ATCC 8739]
gi|170680984|ref|YP_001746802.1| putative GTP-binding protein YjiA [Escherichia coli SMS-3-5]
gi|188495493|ref|ZP_03002763.1| CobW/P47K family protein [Escherichia coli 53638]
gi|191168956|ref|ZP_03030724.1| CobW/P47K family protein [Escherichia coli B7A]
gi|194426568|ref|ZP_03059122.1| CobW/P47K family protein [Escherichia coli B171]
gi|194437799|ref|ZP_03069894.1| CobW/P47K family protein [Escherichia coli 101-1]
gi|195937624|ref|ZP_03083006.1| putative GTP-binding protein YjiA [Escherichia coli O157:H7 str.
EC4024]
gi|208807708|ref|ZP_03250045.1| CobW/P47K family protein [Escherichia coli O157:H7 str. EC4206]
gi|208813685|ref|ZP_03255014.1| CobW/P47K family protein [Escherichia coli O157:H7 str. EC4045]
gi|208819141|ref|ZP_03259461.1| CobW/P47K family protein [Escherichia coli O157:H7 str. EC4042]
gi|209399880|ref|YP_002273873.1| GTP-binding protein YjiA [Escherichia coli O157:H7 str. EC4115]
gi|217325137|ref|ZP_03441221.1| CobW/P47K family protein [Escherichia coli O157:H7 str. TW14588]
gi|218550383|ref|YP_002384174.1| GTP-binding protein YjiA [Escherichia fergusonii ATCC 35469]
gi|227885165|ref|ZP_04002970.1| cobalamin synthesis protein [Escherichia coli 83972]
gi|251787593|ref|YP_003001897.1| P-loop guanosine triphosphatase [Escherichia coli BL21(DE3)]
gi|253775027|ref|YP_003037858.1| GTP-binding protein YjiA [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254164269|ref|YP_003047379.1| putative GTP-binding protein YjiA [Escherichia coli B str. REL606]
gi|254291020|ref|YP_003056770.1| GTPase [Escherichia coli BL21(DE3)]
gi|254796348|ref|YP_003081185.1| GTP-binding protein YjiA [Escherichia coli O157:H7 str. TW14359]
gi|260858514|ref|YP_003232405.1| GTP-binding protein YjiA [Escherichia coli O26:H11 str. 11368]
gi|261226709|ref|ZP_05940990.1| putative GTP-binding protein YjiA [Escherichia coli O157:H7 str.
FRIK2000]
gi|261256907|ref|ZP_05949440.1| putative GTP-binding protein YjiA [Escherichia coli O157:H7 str.
FRIK966]
gi|291285731|ref|YP_003502549.1| GTPase [Escherichia coli O55:H7 str. CB9615]
gi|297517670|ref|ZP_06936056.1| putative GTP-binding protein YjiA [Escherichia coli OP50]
gi|300916529|ref|ZP_07133261.1| CobW/P47K family protein [Escherichia coli MS 115-1]
gi|300932028|ref|ZP_07147323.1| CobW/P47K family protein [Escherichia coli MS 187-1]
gi|300939336|ref|ZP_07154004.1| CobW/P47K family protein [Escherichia coli MS 21-1]
gi|300946733|ref|ZP_07160982.1| CobW/P47K family protein [Escherichia coli MS 116-1]
gi|300959133|ref|ZP_07171219.1| CobW/P47K family protein [Escherichia coli MS 175-1]
gi|300980751|ref|ZP_07175166.1| CobW/P47K family protein [Escherichia coli MS 45-1]
gi|301022254|ref|ZP_07186152.1| CobW/P47K family protein [Escherichia coli MS 196-1]
gi|301048312|ref|ZP_07195343.1| CobW/P47K family protein [Escherichia coli MS 185-1]
gi|301330302|ref|ZP_07222954.1| CobW/P47K family protein [Escherichia coli MS 78-1]
gi|312966066|ref|ZP_07780292.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
2362-75]
gi|331640393|ref|ZP_08341541.1| putative cobalamin synthesis protein [Escherichia coli H736]
gi|331666167|ref|ZP_08367048.1| putative cobalamin synthesis protein [Escherichia coli TA271]
gi|366159605|ref|ZP_09459467.1| putative GTP-binding protein YjiA [Escherichia sp. TW09308]
gi|386279004|ref|ZP_10056694.1| hypothetical protein ESBG_03778 [Escherichia sp. 4_1_40B]
gi|386617229|ref|YP_006136896.1| nucleotide-binding domain protein [Escherichia coli UMNK88]
gi|386642091|ref|YP_006108889.1| putative cobalamin synthesis protein [Escherichia coli ABU 83972]
gi|387509795|ref|YP_006162051.1| putative GTP-binding protein YjiA [Escherichia coli O55:H7 str.
RM12579]
gi|387610231|ref|YP_006099089.1| putative nucleotide-binding protein [Escherichia coli 042]
gi|387615075|ref|YP_006118192.1| putative nucleotide-binding protein [Escherichia coli ETEC H10407]
gi|387832339|ref|YP_003352276.1| hypothetical protein ECSF_4286 [Escherichia coli SE15]
gi|387885550|ref|YP_006315852.1| putative GTP-binding protein YjiA [Escherichia coli Xuzhou21]
gi|404373268|ref|ZP_10978533.1| hypothetical protein ESCG_01130 [Escherichia sp. 1_1_43]
gi|415777729|ref|ZP_11488928.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
3431]
gi|415781243|ref|ZP_11490931.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
EPECa14]
gi|415813961|ref|ZP_11505624.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
LT-68]
gi|416285874|ref|ZP_11648023.1| Putative metal chaperone, involved in Zn homeostasis, GTPase of
COG0523 family [Shigella boydii ATCC 9905]
gi|416309130|ref|ZP_11655583.1| Putative metal chaperone, involved in Zn homeostasis, GTPase of
COG0523 family [Escherichia coli O157:H7 str. 1044]
gi|416319174|ref|ZP_11661726.1| Putative metal chaperone, involved in Zn homeostasis, GTPase of
COG0523 family [Escherichia coli O157:H7 str. EC1212]
gi|416326061|ref|ZP_11666385.1| Putative metal chaperone, involved in Zn homeostasis, GTPase of
COG0523 family [Escherichia coli O157:H7 str. 1125]
gi|416779609|ref|ZP_11876609.1| putative GTP-binding protein YjiA [Escherichia coli O157:H7 str.
G5101]
gi|416790801|ref|ZP_11881498.1| putative GTP-binding protein YjiA [Escherichia coli O157:H- str.
493-89]
gi|416802601|ref|ZP_11886386.1| putative GTP-binding protein YjiA [Escherichia coli O157:H- str. H
2687]
gi|416813474|ref|ZP_11891325.1| putative GTP-binding protein YjiA [Escherichia coli O55:H7 str.
3256-97]
gi|416823984|ref|ZP_11895926.1| putative GTP-binding protein YjiA [Escherichia coli O55:H7 str.
USDA 5905]
gi|416834287|ref|ZP_11900922.1| putative GTP-binding protein YjiA [Escherichia coli O157:H7 str.
LSU-61]
gi|417273687|ref|ZP_12061032.1| CobW/P47K family protein [Escherichia coli 2.4168]
gi|417293474|ref|ZP_12080753.1| CobW/P47K family protein [Escherichia coli B41]
gi|417295328|ref|ZP_12082581.1| CobW/P47K family protein [Escherichia coli 900105 (10e)]
gi|417616281|ref|ZP_12266721.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
G58-1]
gi|417642459|ref|ZP_12292578.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
TX1999]
gi|417705425|ref|ZP_12354500.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
flexneri VA-6]
gi|417710551|ref|ZP_12359561.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
flexneri K-272]
gi|417720474|ref|ZP_12369346.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
flexneri K-227]
gi|417753758|ref|ZP_12401855.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC2B]
gi|417830950|ref|ZP_12477484.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
flexneri J1713]
gi|419000022|ref|ZP_13547591.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC1A]
gi|419005275|ref|ZP_13552774.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC1B]
gi|419010911|ref|ZP_13558308.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC1C]
gi|419011489|ref|ZP_13558859.1| hypothetical protein ECDEC1D_0312 [Escherichia coli DEC1D]
gi|419016422|ref|ZP_13563750.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC1E]
gi|419022017|ref|ZP_13569266.1| hypothetical protein ECDEC2A_0126 [Escherichia coli DEC2A]
gi|419032264|ref|ZP_13579393.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC2C]
gi|419032726|ref|ZP_13579827.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC2D]
gi|419042873|ref|ZP_13589879.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC2E]
gi|419048602|ref|ZP_13595527.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC3A]
gi|419054228|ref|ZP_13601091.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC3B]
gi|419054587|ref|ZP_13601448.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC3C]
gi|419065662|ref|ZP_13612362.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC3D]
gi|419065977|ref|ZP_13612668.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC3E]
gi|419073140|ref|ZP_13618716.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC3F]
gi|419083698|ref|ZP_13629135.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC4A]
gi|419089705|ref|ZP_13635049.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC4B]
gi|419095601|ref|ZP_13640870.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC4C]
gi|419101512|ref|ZP_13646693.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC4D]
gi|419106986|ref|ZP_13652099.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC4E]
gi|419112432|ref|ZP_13657477.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC4F]
gi|419117971|ref|ZP_13662971.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC5A]
gi|419118271|ref|ZP_13663259.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC5B]
gi|419128848|ref|ZP_13673711.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC5C]
gi|419129507|ref|ZP_13674366.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC5D]
gi|419139906|ref|ZP_13684690.1| hypothetical protein ECDEC5E_5495 [Escherichia coli DEC5E]
gi|419145484|ref|ZP_13690203.1| hypothetical protein ECDEC6A_5203 [Escherichia coli DEC6A]
gi|419146129|ref|ZP_13690827.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC6B]
gi|419167908|ref|ZP_13712309.1| hypothetical protein ECDEC7A_0035 [Escherichia coli DEC7A]
gi|419178957|ref|ZP_13722584.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC7C]
gi|419184419|ref|ZP_13727945.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC7D]
gi|419194665|ref|ZP_13738097.1| hypothetical protein ECDEC7E_5012 [Escherichia coli DEC7E]
gi|419206868|ref|ZP_13749999.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC8C]
gi|419213300|ref|ZP_13756335.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC8D]
gi|419252561|ref|ZP_13795113.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC10A]
gi|419258503|ref|ZP_13800967.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC10B]
gi|419264731|ref|ZP_13807121.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC10C]
gi|419275864|ref|ZP_13818142.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC10D]
gi|419314782|ref|ZP_13856615.1| hypothetical protein ECDEC12A_0065 [Escherichia coli DEC12A]
gi|419320577|ref|ZP_13862323.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC12B]
gi|419332104|ref|ZP_13873687.1| hypothetical protein ECDEC12C_5379 [Escherichia coli DEC12C]
gi|419337833|ref|ZP_13879327.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC12D]
gi|419337952|ref|ZP_13879444.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC12E]
gi|419873345|ref|ZP_14395337.1| putative GTP-binding protein YjiA [Escherichia coli O111:H11 str.
CVM9534]
gi|419880324|ref|ZP_14401722.1| putative GTP-binding protein YjiA [Escherichia coli O111:H11 str.
CVM9545]
gi|419901501|ref|ZP_14420838.1| putative GTP-binding protein YjiA [Escherichia coli O26:H11 str.
CVM9942]
gi|419905334|ref|ZP_14424302.1| hypothetical protein ECO10026_29219 [Escherichia coli O26:H11 str.
CVM10026]
gi|419912877|ref|ZP_14431324.1| putative GTP-binding protein YjiA [Escherichia coli KD1]
gi|419938536|ref|ZP_14455366.1| putative GTP-binding protein YjiA [Escherichia coli 75]
gi|420099795|ref|ZP_14611008.1| putative GTP-binding protein YjiA [Escherichia coli O111:H11 str.
CVM9455]
gi|420106966|ref|ZP_14617343.1| putative GTP-binding protein YjiA [Escherichia coli O111:H11 str.
CVM9553]
gi|420116300|ref|ZP_14625732.1| putative GTP-binding protein YjiA [Escherichia coli O26:H11 str.
CVM10021]
gi|420120403|ref|ZP_14629613.1| putative GTP-binding protein YjiA [Escherichia coli O26:H11 str.
CVM10030]
gi|420126109|ref|ZP_14634867.1| putative GTP-binding protein YjiA [Escherichia coli O26:H11 str.
CVM10224]
gi|420131196|ref|ZP_14639654.1| putative GTP-binding protein YjiA [Escherichia coli O26:H11 str.
CVM9952]
gi|420267361|ref|ZP_14769772.1| hypothetical protein ECPA22_0140 [Escherichia coli PA22]
gi|420272918|ref|ZP_14775253.1| hypothetical protein ECPA40_0148 [Escherichia coli PA40]
gi|420283730|ref|ZP_14785955.1| hypothetical protein ECTW06591_5313 [Escherichia coli TW06591]
gi|420284189|ref|ZP_14786409.1| hypothetical protein ECTW10246_0325 [Escherichia coli TW10246]
gi|420289964|ref|ZP_14792133.1| hypothetical protein ECTW11039_0078 [Escherichia coli TW11039]
gi|420295688|ref|ZP_14797786.1| hypothetical protein ECTW09109_0142 [Escherichia coli TW09109]
gi|420301537|ref|ZP_14803572.1| hypothetical protein ECTW10119_0329 [Escherichia coli TW10119]
gi|420307578|ref|ZP_14809554.1| hypothetical protein ECEC1738_0142 [Escherichia coli EC1738]
gi|420312792|ref|ZP_14814707.1| hypothetical protein ECEC1734_0074 [Escherichia coli EC1734]
gi|420323441|ref|ZP_14825256.1| hypothetical protein SF285071_5151 [Shigella flexneri 2850-71]
gi|420328916|ref|ZP_14830634.1| hypothetical protein SFK1770_0218 [Shigella flexneri K-1770]
gi|420388799|ref|ZP_14888120.1| hypothetical protein ECEPECA12_5204 [Escherichia coli EPECa12]
gi|420389267|ref|ZP_14888541.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
EPEC C342-62]
gi|421775363|ref|ZP_16211973.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
AD30]
gi|421815462|ref|ZP_16251152.1| hypothetical protein EC80416_5244 [Escherichia coli 8.0416]
gi|421816162|ref|ZP_16251735.1| hypothetical protein EC100821_0075 [Escherichia coli 10.0821]
gi|421827453|ref|ZP_16262795.1| hypothetical protein ECFRIK920_5884 [Escherichia coli FRIK920]
gi|421828307|ref|ZP_16263639.1| hypothetical protein ECPA7_0447 [Escherichia coli PA7]
gi|422361481|ref|ZP_16442103.1| CobW/P47K family protein [Escherichia coli MS 110-3]
gi|422363986|ref|ZP_16444517.1| CobW/P47K family protein [Escherichia coli MS 153-1]
gi|422756284|ref|ZP_16810107.1| CobW/HypB/UreG [Escherichia coli H263]
gi|422773131|ref|ZP_16826817.1| CobW/HypB/UreG [Escherichia coli E482]
gi|422788192|ref|ZP_16840929.1| CobW/HypB/UreG [Escherichia coli H489]
gi|422794006|ref|ZP_16846698.1| CobW/HypB/UreG [Escherichia coli TA007]
gi|422804024|ref|ZP_16852456.1| CobW/HypB/UreG [Escherichia fergusonii B253]
gi|422815970|ref|ZP_16864185.1| hypothetical protein ESMG_00497 [Escherichia coli M919]
gi|422840066|ref|ZP_16888037.1| hypothetical protein ESPG_02723 [Escherichia coli H397]
gi|423700739|ref|ZP_17675198.1| hypothetical protein ESSG_00270 [Escherichia coli H730]
gi|423728705|ref|ZP_17702406.1| hypothetical protein ECPA31_5578 [Escherichia coli PA31]
gi|424080719|ref|ZP_17817645.1| hypothetical protein ECFDA505_5630 [Escherichia coli FDA505]
gi|424080954|ref|ZP_17817861.1| hypothetical protein ECFDA517_0033 [Escherichia coli FDA517]
gi|424087631|ref|ZP_17823933.1| hypothetical protein ECFRIK1996_0034 [Escherichia coli FRIK1996]
gi|424100248|ref|ZP_17835460.1| hypothetical protein ECFRIK1985_5923 [Escherichia coli FRIK1985]
gi|424106452|ref|ZP_17841145.1| hypothetical protein ECFRIK1990_5826 [Escherichia coli FRIK1990]
gi|424107077|ref|ZP_17841698.1| hypothetical protein EC93001_0035 [Escherichia coli 93-001]
gi|424113049|ref|ZP_17847248.1| hypothetical protein ECPA3_0034 [Escherichia coli PA3]
gi|424125179|ref|ZP_17858447.1| hypothetical protein ECPA5_5609 [Escherichia coli PA5]
gi|424125395|ref|ZP_17858637.1| hypothetical protein ECPA9_0074 [Escherichia coli PA9]
gi|424137679|ref|ZP_17870082.1| hypothetical protein ECPA10_5955 [Escherichia coli PA10]
gi|424144219|ref|ZP_17876039.1| hypothetical protein ECPA14_5785 [Escherichia coli PA14]
gi|424144471|ref|ZP_17876279.1| hypothetical protein ECPA15_0076 [Escherichia coli PA15]
gi|424172093|ref|ZP_17887366.1| hypothetical protein ECPA24_5521 [Escherichia coli PA24]
gi|424259968|ref|ZP_17892904.1| hypothetical protein ECPA25_5492 [Escherichia coli PA25]
gi|424260654|ref|ZP_17893240.1| hypothetical protein ECPA28_0076 [Escherichia coli PA28]
gi|424452938|ref|ZP_17904537.1| hypothetical protein ECPA32_5659 [Escherichia coli PA32]
gi|424459086|ref|ZP_17910148.1| hypothetical protein ECPA33_5637 [Escherichia coli PA33]
gi|424465665|ref|ZP_17915921.1| hypothetical protein ECPA39_5761 [Escherichia coli PA39]
gi|424471931|ref|ZP_17921693.1| hypothetical protein ECPA41_5802 [Escherichia coli PA41]
gi|424472357|ref|ZP_17922069.1| hypothetical protein ECPA42_0076 [Escherichia coli PA42]
gi|424478326|ref|ZP_17927615.1| hypothetical protein ECTW07945_0068 [Escherichia coli TW07945]
gi|424484350|ref|ZP_17933269.1| hypothetical protein ECTW09098_0018 [Escherichia coli TW09098]
gi|424497082|ref|ZP_17944520.1| hypothetical protein ECTW09195_5772 [Escherichia coli TW09195]
gi|424503649|ref|ZP_17950504.1| hypothetical protein ECEC4203_5731 [Escherichia coli EC4203]
gi|424509927|ref|ZP_17956259.1| hypothetical protein ECEC4196_5782 [Escherichia coli EC4196]
gi|424517357|ref|ZP_17961883.1| hypothetical protein ECTW14313_5611 [Escherichia coli TW14313]
gi|424529307|ref|ZP_17972993.1| hypothetical protein ECEC4421_5555 [Escherichia coli EC4421]
gi|424529668|ref|ZP_17973337.1| hypothetical protein ECEC4422_0073 [Escherichia coli EC4422]
gi|424535637|ref|ZP_17978945.1| hypothetical protein ECEC4013_0140 [Escherichia coli EC4013]
gi|424547722|ref|ZP_17990006.1| hypothetical protein ECEC4402_5716 [Escherichia coli EC4402]
gi|424553915|ref|ZP_17995707.1| hypothetical protein ECEC4439_5681 [Escherichia coli EC4439]
gi|424560100|ref|ZP_18001464.1| hypothetical protein ECEC4436_5632 [Escherichia coli EC4436]
gi|424560488|ref|ZP_18001814.1| hypothetical protein ECEC4437_0033 [Escherichia coli EC4437]
gi|424572563|ref|ZP_18013066.1| hypothetical protein ECEC4448_5693 [Escherichia coli EC4448]
gi|424578711|ref|ZP_18018712.1| hypothetical protein ECEC1845_5640 [Escherichia coli EC1845]
gi|424584524|ref|ZP_18024144.1| hypothetical protein ECEC1863_5396 [Escherichia coli EC1863]
gi|424748060|ref|ZP_18176209.1| putative GTP-binding protein YjiA [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424758556|ref|ZP_18186258.1| putative GTP-binding protein YjiA [Escherichia coli O111:H11 str.
CFSAN001630]
gi|425095338|ref|ZP_18498398.1| hypothetical protein EC34870_0074 [Escherichia coli 3.4870]
gi|425101423|ref|ZP_18504111.1| hypothetical protein EC52239_0074 [Escherichia coli 5.2239]
gi|425107280|ref|ZP_18509565.1| hypothetical protein EC60172_0075 [Escherichia coli 6.0172]
gi|425123088|ref|ZP_18524703.1| hypothetical protein EC80586_0077 [Escherichia coli 8.0586]
gi|425134973|ref|ZP_18535799.1| hypothetical protein EC82524_5609 [Escherichia coli 8.2524]
gi|425135458|ref|ZP_18536227.1| hypothetical protein EC100833_0143 [Escherichia coli 10.0833]
gi|425147247|ref|ZP_18547211.1| hypothetical protein EC100869_5503 [Escherichia coli 10.0869]
gi|425147682|ref|ZP_18547619.1| hypothetical protein EC880221_0140 [Escherichia coli 88.0221]
gi|425153293|ref|ZP_18552880.1| hypothetical protein ECPA34_0075 [Escherichia coli PA34]
gi|425159756|ref|ZP_18558966.1| hypothetical protein ECFDA506_0398 [Escherichia coli FDA506]
gi|425171317|ref|ZP_18569768.1| hypothetical protein ECFDA507_5725 [Escherichia coli FDA507]
gi|425171559|ref|ZP_18569996.1| hypothetical protein ECFDA504_0075 [Escherichia coli FDA504]
gi|425177359|ref|ZP_18575446.1| hypothetical protein ECFRIK1999_0061 [Escherichia coli FRIK1999]
gi|425183585|ref|ZP_18581245.1| hypothetical protein ECFRIK1997_0078 [Escherichia coli FRIK1997]
gi|425190320|ref|ZP_18587479.1| hypothetical protein ECNE1487_0196 [Escherichia coli NE1487]
gi|425196615|ref|ZP_18593307.1| hypothetical protein ECNE037_0077 [Escherichia coli NE037]
gi|425203313|ref|ZP_18599475.1| hypothetical protein ECFRIK2001_0322 [Escherichia coli FRIK2001]
gi|425209086|ref|ZP_18604858.1| hypothetical protein ECPA4_0077 [Escherichia coli PA4]
gi|425221184|ref|ZP_18616124.1| hypothetical protein ECPA23_5665 [Escherichia coli PA23]
gi|425221692|ref|ZP_18616587.1| hypothetical protein ECPA49_0076 [Escherichia coli PA49]
gi|425227944|ref|ZP_18622376.1| hypothetical protein ECPA45_0075 [Escherichia coli PA45]
gi|425234242|ref|ZP_18628236.1| hypothetical protein ECTT12B_0076 [Escherichia coli TT12B]
gi|425240219|ref|ZP_18633889.1| hypothetical protein ECMA6_0191 [Escherichia coli MA6]
gi|425246300|ref|ZP_18639539.1| hypothetical protein EC5905_0130 [Escherichia coli 5905]
gi|425258162|ref|ZP_18650623.1| hypothetical protein ECCB7326_5722 [Escherichia coli CB7326]
gi|425264405|ref|ZP_18656364.1| hypothetical protein ECEC96038_5609 [Escherichia coli EC96038]
gi|425264541|ref|ZP_18656497.1| hypothetical protein EC5412_0011 [Escherichia coli 5412]
gi|425291535|ref|ZP_18682331.1| hypothetical protein EC3006_4989 [Escherichia coli 3006]
gi|425297895|ref|ZP_18687971.1| hypothetical protein ECPA38_5492 [Escherichia coli PA38]
gi|425308699|ref|ZP_18698211.1| hypothetical protein ECEC1735_0033 [Escherichia coli EC1735]
gi|425320546|ref|ZP_18709295.1| hypothetical protein ECEC1736_5610 [Escherichia coli EC1736]
gi|425326733|ref|ZP_18715025.1| hypothetical protein ECEC1737_5661 [Escherichia coli EC1737]
gi|425332965|ref|ZP_18720745.1| hypothetical protein ECEC1846_5656 [Escherichia coli EC1846]
gi|425339138|ref|ZP_18726443.1| hypothetical protein ECEC1847_5679 [Escherichia coli EC1847]
gi|425339472|ref|ZP_18726753.1| hypothetical protein ECEC1848_0139 [Escherichia coli EC1848]
gi|425351307|ref|ZP_18737739.1| hypothetical protein ECEC1849_5596 [Escherichia coli EC1849]
gi|425351564|ref|ZP_18737985.1| hypothetical protein ECEC1850_0090 [Escherichia coli EC1850]
gi|425363539|ref|ZP_18749161.1| hypothetical protein ECEC1856_5651 [Escherichia coli EC1856]
gi|425369812|ref|ZP_18754845.1| hypothetical protein ECEC1862_5659 [Escherichia coli EC1862]
gi|425370095|ref|ZP_18755101.1| hypothetical protein ECEC1864_0074 [Escherichia coli EC1864]
gi|425382811|ref|ZP_18766767.1| hypothetical protein ECEC1865_5792 [Escherichia coli EC1865]
gi|425388952|ref|ZP_18772486.1| hypothetical protein ECEC1866_5550 [Escherichia coli EC1866]
gi|425389594|ref|ZP_18773089.1| hypothetical protein ECEC1868_0078 [Escherichia coli EC1868]
gi|425395715|ref|ZP_18778795.1| hypothetical protein ECEC1869_0075 [Escherichia coli EC1869]
gi|425407875|ref|ZP_18790067.1| hypothetical protein ECEC1870_5650 [Escherichia coli EC1870]
gi|425408251|ref|ZP_18790440.1| hypothetical protein ECNE098_0075 [Escherichia coli NE098]
gi|425420531|ref|ZP_18801778.1| hypothetical protein ECFRIK523_5648 [Escherichia coli FRIK523]
gi|425431828|ref|ZP_18812411.1| hypothetical protein EC01304_5797 [Escherichia coli 0.1304]
gi|428944294|ref|ZP_19016988.1| hypothetical protein EC881467_0071 [Escherichia coli 88.1467]
gi|428950474|ref|ZP_19022656.1| hypothetical protein EC881042_0074 [Escherichia coli 88.1042]
gi|428962356|ref|ZP_19033607.1| hypothetical protein EC890511_5646 [Escherichia coli 89.0511]
gi|428962686|ref|ZP_19033908.1| hypothetical protein EC900091_0142 [Escherichia coli 90.0091]
gi|428974677|ref|ZP_19044959.1| hypothetical protein EC900039_5506 [Escherichia coli 90.0039]
gi|428975246|ref|ZP_19045458.1| hypothetical protein EC902281_0075 [Escherichia coli 90.2281]
gi|428986878|ref|ZP_19056240.1| hypothetical protein EC930055_5543 [Escherichia coli 93.0055]
gi|428987275|ref|ZP_19056603.1| hypothetical protein EC930056_0075 [Escherichia coli 93.0056]
gi|428998909|ref|ZP_19067474.1| hypothetical protein EC940618_5496 [Escherichia coli 94.0618]
gi|428999180|ref|ZP_19067730.1| hypothetical protein EC950183_0062 [Escherichia coli 95.0183]
gi|429011410|ref|ZP_19078755.1| hypothetical protein EC951288_5425 [Escherichia coli 95.1288]
gi|429011777|ref|ZP_19079067.1| hypothetical protein EC950943_0073 [Escherichia coli 95.0943]
gi|429018061|ref|ZP_19084879.1| hypothetical protein EC960428_0076 [Escherichia coli 96.0428]
gi|429029727|ref|ZP_19095669.1| hypothetical protein EC960427_5665 [Escherichia coli 96.0427]
gi|429035897|ref|ZP_19101390.1| hypothetical protein EC960939_5725 [Escherichia coli 96.0939]
gi|429042084|ref|ZP_19107123.1| hypothetical protein EC960107_0074 [Escherichia coli 96.0107]
gi|429047918|ref|ZP_19112586.1| hypothetical protein EC970003_0075 [Escherichia coli 97.0003]
gi|429064257|ref|ZP_19128184.1| hypothetical protein EC970007_5057 [Escherichia coli 97.0007]
gi|429070515|ref|ZP_19133917.1| hypothetical protein EC990672_5721 [Escherichia coli 99.0672]
gi|429070981|ref|ZP_19134349.1| hypothetical protein EC990678_0139 [Escherichia coli 99.0678]
gi|429076214|ref|ZP_19139444.1| hypothetical protein EC990713_0074 [Escherichia coli 99.0713]
gi|429829647|ref|ZP_19360608.1| hypothetical protein EC960109_5743 [Escherichia coli 96.0109]
gi|429836136|ref|ZP_19366328.1| hypothetical protein EC970010_5715 [Escherichia coli 97.0010]
gi|432367945|ref|ZP_19611054.1| GTPase [Escherichia coli KTE10]
gi|432374885|ref|ZP_19617908.1| GTPase [Escherichia coli KTE11]
gi|432409945|ref|ZP_19652633.1| GTPase [Escherichia coli KTE39]
gi|432414906|ref|ZP_19657545.1| GTPase [Escherichia coli KTE44]
gi|432430104|ref|ZP_19672555.1| GTPase [Escherichia coli KTE187]
gi|432434489|ref|ZP_19676902.1| GTPase [Escherichia coli KTE188]
gi|432452695|ref|ZP_19694943.1| GTPase [Escherichia coli KTE193]
gi|432454719|ref|ZP_19696931.1| GTPase [Escherichia coli KTE201]
gi|432468869|ref|ZP_19710933.1| GTPase [Escherichia coli KTE205]
gi|432483586|ref|ZP_19725516.1| GTPase [Escherichia coli KTE212]
gi|432493770|ref|ZP_19735592.1| GTPase [Escherichia coli KTE214]
gi|432498240|ref|ZP_19740023.1| GTPase [Escherichia coli KTE216]
gi|432522082|ref|ZP_19759229.1| GTPase [Escherichia coli KTE230]
gi|432532160|ref|ZP_19769172.1| GTPase [Escherichia coli KTE234]
gi|432551982|ref|ZP_19788716.1| GTPase [Escherichia coli KTE47]
gi|432561876|ref|ZP_19798510.1| GTPase [Escherichia coli KTE51]
gi|432566814|ref|ZP_19803347.1| GTPase [Escherichia coli KTE53]
gi|432578659|ref|ZP_19815096.1| GTPase [Escherichia coli KTE56]
gi|432586279|ref|ZP_19822654.1| GTPase [Escherichia coli KTE58]
gi|432590944|ref|ZP_19827278.1| GTPase [Escherichia coli KTE60]
gi|432605807|ref|ZP_19842008.1| GTPase [Escherichia coli KTE67]
gi|432625501|ref|ZP_19861491.1| GTPase [Escherichia coli KTE77]
gi|432635271|ref|ZP_19871163.1| GTPase [Escherichia coli KTE81]
gi|432668759|ref|ZP_19904318.1| GTPase [Escherichia coli KTE119]
gi|432683834|ref|ZP_19919159.1| GTPase [Escherichia coli KTE156]
gi|432689740|ref|ZP_19924996.1| GTPase [Escherichia coli KTE161]
gi|432692625|ref|ZP_19927849.1| GTPase [Escherichia coli KTE162]
gi|432702499|ref|ZP_19937631.1| GTPase [Escherichia coli KTE171]
gi|432735408|ref|ZP_19970211.1| GTPase [Escherichia coli KTE42]
gi|432757462|ref|ZP_19992000.1| GTPase [Escherichia coli KTE22]
gi|432768753|ref|ZP_20003134.1| GTPase [Escherichia coli KTE50]
gi|432776832|ref|ZP_20011091.1| GTPase [Escherichia coli KTE59]
gi|432790534|ref|ZP_20024656.1| GTPase [Escherichia coli KTE65]
gi|432812103|ref|ZP_20045953.1| GTPase [Escherichia coli KTE101]
gi|432819301|ref|ZP_20053017.1| GTPase [Escherichia coli KTE118]
gi|432825428|ref|ZP_20059088.1| GTPase [Escherichia coli KTE123]
gi|432842205|ref|ZP_20075634.1| GTPase [Escherichia coli KTE141]
gi|432879172|ref|ZP_20096228.1| GTPase [Escherichia coli KTE154]
gi|432916737|ref|ZP_20121599.1| GTPase [Escherichia coli KTE173]
gi|432924044|ref|ZP_20126510.1| GTPase [Escherichia coli KTE175]
gi|432952085|ref|ZP_20145356.1| GTPase [Escherichia coli KTE197]
gi|432958577|ref|ZP_20149534.1| GTPase [Escherichia coli KTE202]
gi|432976646|ref|ZP_20165473.1| GTPase [Escherichia coli KTE209]
gi|432979326|ref|ZP_20168117.1| GTPase [Escherichia coli KTE211]
gi|432993694|ref|ZP_20182317.1| GTPase [Escherichia coli KTE218]
gi|433003491|ref|ZP_20191930.1| GTPase [Escherichia coli KTE227]
gi|433036339|ref|ZP_20224009.1| GTPase [Escherichia coli KTE112]
gi|433050856|ref|ZP_20238157.1| GTPase [Escherichia coli KTE120]
gi|433056267|ref|ZP_20243369.1| GTPase [Escherichia coli KTE124]
gi|433065836|ref|ZP_20252720.1| GTPase [Escherichia coli KTE125]
gi|433075795|ref|ZP_20262407.1| GTPase [Escherichia coli KTE129]
gi|433085590|ref|ZP_20272002.1| GTPase [Escherichia coli KTE137]
gi|433099298|ref|ZP_20285443.1| GTPase [Escherichia coli KTE139]
gi|433108763|ref|ZP_20294698.1| GTPase [Escherichia coli KTE148]
gi|433118362|ref|ZP_20304124.1| GTPase [Escherichia coli KTE153]
gi|433123107|ref|ZP_20308742.1| GTPase [Escherichia coli KTE157]
gi|433133130|ref|ZP_20318517.1| GTPase [Escherichia coli KTE166]
gi|433152084|ref|ZP_20337060.1| GTPase [Escherichia coli KTE176]
gi|433176257|ref|ZP_20360747.1| GTPase [Escherichia coli KTE232]
gi|433186299|ref|ZP_20370507.1| GTPase [Escherichia coli KTE85]
gi|433210592|ref|ZP_20394239.1| GTPase [Escherichia coli KTE97]
gi|433210862|ref|ZP_20394487.1| GTPase [Escherichia coli KTE99]
gi|433327957|ref|ZP_20404056.1| putative GTP-binding protein YjiA [Escherichia coli J96]
gi|442594238|ref|ZP_21012161.1| Putative metal chaperone, involved in Zn homeostasis, GTPase of
COG0523 family [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|442599711|ref|ZP_21017418.1| Putative metal chaperone, involved in Zn homeostasis, GTPase of
COG0523 family [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|444922138|ref|ZP_21241903.1| hypothetical protein EC09BKT78844_0015 [Escherichia coli
09BKT078844]
gi|444933766|ref|ZP_21252745.1| hypothetical protein EC990814_5126 [Escherichia coli 99.0814]
gi|444939197|ref|ZP_21257896.1| hypothetical protein EC990815_5102 [Escherichia coli 99.0815]
gi|444944829|ref|ZP_21263288.1| hypothetical protein EC990816_5209 [Escherichia coli 99.0816]
gi|444950307|ref|ZP_21268578.1| hypothetical protein EC990839_5121 [Escherichia coli 99.0839]
gi|444955867|ref|ZP_21273907.1| hypothetical protein EC990848_5134 [Escherichia coli 99.0848]
gi|444961325|ref|ZP_21279111.1| hypothetical protein EC991753_5136 [Escherichia coli 99.1753]
gi|444966549|ref|ZP_21284081.1| hypothetical protein EC991775_5020 [Escherichia coli 99.1775]
gi|444967083|ref|ZP_21284569.1| hypothetical protein EC991793_0065 [Escherichia coli 99.1793]
gi|444977873|ref|ZP_21294906.1| hypothetical protein EC991805_5046 [Escherichia coli 99.1805]
gi|444983255|ref|ZP_21300140.1| hypothetical protein ECATCC700728_5101 [Escherichia coli ATCC
700728]
gi|444983423|ref|ZP_21300299.1| hypothetical protein ECPA11_0073 [Escherichia coli PA11]
gi|444993353|ref|ZP_21309984.1| hypothetical protein ECPA19_4621 [Escherichia coli PA19]
gi|444993990|ref|ZP_21310612.1| hypothetical protein ECPA19_5261 [Escherichia coli PA19]
gi|444999161|ref|ZP_21315643.1| hypothetical protein ECPA13_4959 [Escherichia coli PA13]
gi|444999491|ref|ZP_21315966.1| hypothetical protein ECPA2_0073 [Escherichia coli PA2]
gi|445010178|ref|ZP_21326386.1| hypothetical protein ECPA47_5090 [Escherichia coli PA47]
gi|445015259|ref|ZP_21331342.1| hypothetical protein ECPA48_4973 [Escherichia coli PA48]
gi|445015895|ref|ZP_21331956.1| hypothetical protein ECPA8_0072 [Escherichia coli PA8]
gi|445026609|ref|ZP_21342398.1| hypothetical protein EC991781_0062 [Escherichia coli 99.1781]
gi|445032084|ref|ZP_21347722.1| hypothetical protein EC991762_0073 [Escherichia coli 99.1762]
gi|445037777|ref|ZP_21353260.1| hypothetical protein ECPA35_0127 [Escherichia coli PA35]
gi|445048237|ref|ZP_21363467.1| hypothetical protein EC34880_5189 [Escherichia coli 3.4880]
gi|445053807|ref|ZP_21368799.1| hypothetical protein EC950083_5083 [Escherichia coli 95.0083]
gi|445054224|ref|ZP_21369186.1| hypothetical protein EC990670_0075 [Escherichia coli 99.0670]
gi|452970201|ref|ZP_21968428.1| GTP-binding protein YjiA [Escherichia coli O157:H7 str. EC4009]
gi|157080101|gb|ABV19809.1| CobW/P47K family protein [Escherichia coli E24377A]
gi|169756626|gb|ACA79325.1| cobalamin synthesis protein P47K [Escherichia coli ATCC 8739]
gi|170518702|gb|ACB16880.1| CobW/P47K family protein [Escherichia coli SMS-3-5]
gi|187770302|gb|EDU34146.1| CobW/P47K family protein [Escherichia coli O157:H7 str. EC4196]
gi|188016164|gb|EDU54286.1| CobW/P47K family protein [Escherichia coli O157:H7 str. EC4113]
gi|188490692|gb|EDU65795.1| CobW/P47K family protein [Escherichia coli 53638]
gi|189000789|gb|EDU69775.1| CobW/P47K family protein [Escherichia coli O157:H7 str. EC4076]
gi|189357820|gb|EDU76239.1| CobW/P47K family protein [Escherichia coli O157:H7 str. EC4401]
gi|189364154|gb|EDU82573.1| CobW/P47K family protein [Escherichia coli O157:H7 str. EC4486]
gi|189368937|gb|EDU87353.1| CobW/P47K family protein [Escherichia coli O157:H7 str. EC4501]
gi|189374886|gb|EDU93302.1| CobW/P47K family protein [Escherichia coli O157:H7 str. EC869]
gi|189379478|gb|EDU97894.1| CobW/P47K family protein [Escherichia coli O157:H7 str. EC508]
gi|190901003|gb|EDV60784.1| CobW/P47K family protein [Escherichia coli B7A]
gi|194415307|gb|EDX31575.1| CobW/P47K family protein [Escherichia coli B171]
gi|194423295|gb|EDX39287.1| CobW/P47K family protein [Escherichia coli 101-1]
gi|208727509|gb|EDZ77110.1| CobW/P47K family protein [Escherichia coli O157:H7 str. EC4206]
gi|208734962|gb|EDZ83649.1| CobW/P47K family protein [Escherichia coli O157:H7 str. EC4045]
gi|208739264|gb|EDZ86946.1| CobW/P47K family protein [Escherichia coli O157:H7 str. EC4042]
gi|209161280|gb|ACI38713.1| CobW/P47K family protein [Escherichia coli O157:H7 str. EC4115]
gi|217321358|gb|EEC29782.1| CobW/P47K family protein [Escherichia coli O157:H7 str. TW14588]
gi|218357924|emb|CAQ90568.1| putative GTPase [Escherichia fergusonii ATCC 35469]
gi|227837994|gb|EEJ48460.1| cobalamin synthesis protein [Escherichia coli 83972]
gi|242379866|emb|CAQ34701.1| P-loop guanosine triphosphatase [Escherichia coli BL21(DE3)]
gi|253326071|gb|ACT30673.1| cobalamin synthesis protein P47K [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253976172|gb|ACT41843.1| predicted GTPase [Escherichia coli B str. REL606]
gi|253980329|gb|ACT45999.1| predicted GTPase [Escherichia coli BL21(DE3)]
gi|254595748|gb|ACT75109.1| predicted GTPase [Escherichia coli O157:H7 str. TW14359]
gi|257757163|dbj|BAI28665.1| predicted GTPase [Escherichia coli O26:H11 str. 11368]
gi|281181496|dbj|BAI57826.1| conserved hypothetical protein [Escherichia coli SE15]
gi|284924533|emb|CBG37672.1| putative nucleotide-binding protein [Escherichia coli 042]
gi|290765604|gb|ADD59565.1| Putative GTPase [Escherichia coli O55:H7 str. CB9615]
gi|299881304|gb|EFI89515.1| CobW/P47K family protein [Escherichia coli MS 196-1]
gi|300299820|gb|EFJ56205.1| CobW/P47K family protein [Escherichia coli MS 185-1]
gi|300314281|gb|EFJ64065.1| CobW/P47K family protein [Escherichia coli MS 175-1]
gi|300409166|gb|EFJ92704.1| CobW/P47K family protein [Escherichia coli MS 45-1]
gi|300416175|gb|EFJ99485.1| CobW/P47K family protein [Escherichia coli MS 115-1]
gi|300453589|gb|EFK17209.1| CobW/P47K family protein [Escherichia coli MS 116-1]
gi|300455740|gb|EFK19233.1| CobW/P47K family protein [Escherichia coli MS 21-1]
gi|300460173|gb|EFK23666.1| CobW/P47K family protein [Escherichia coli MS 187-1]
gi|300843724|gb|EFK71484.1| CobW/P47K family protein [Escherichia coli MS 78-1]
gi|307556583|gb|ADN49358.1| putative cobalamin synthesis protein [Escherichia coli ABU 83972]
gi|309704812|emb|CBJ04163.1| putative nucleotide-binding protein [Escherichia coli ETEC H10407]
gi|312289309|gb|EFR17203.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
2362-75]
gi|315284689|gb|EFU44134.1| CobW/P47K family protein [Escherichia coli MS 110-3]
gi|315293297|gb|EFU52649.1| CobW/P47K family protein [Escherichia coli MS 153-1]
gi|315616280|gb|EFU96899.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
3431]
gi|320179358|gb|EFW54316.1| Putative metal chaperone, involved in Zn homeostasis, GTPase of
COG0523 family [Shigella boydii ATCC 9905]
gi|320190530|gb|EFW65180.1| Putative metal chaperone, involved in Zn homeostasis, GTPase of
COG0523 family [Escherichia coli O157:H7 str. EC1212]
gi|320638732|gb|EFX08390.1| putative GTP-binding protein YjiA [Escherichia coli O157:H7 str.
G5101]
gi|320644444|gb|EFX13509.1| putative GTP-binding protein YjiA [Escherichia coli O157:H- str.
493-89]
gi|320649762|gb|EFX18286.1| putative GTP-binding protein YjiA [Escherichia coli O157:H- str. H
2687]
gi|320654812|gb|EFX22781.1| putative GTP-binding protein YjiA [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320660664|gb|EFX28125.1| putative GTP-binding protein YjiA [Escherichia coli O55:H7 str.
USDA 5905]
gi|320665591|gb|EFX32637.1| putative GTP-binding protein YjiA [Escherichia coli O157:H7 str.
LSU-61]
gi|323157620|gb|EFZ43726.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
EPECa14]
gi|323171363|gb|EFZ57010.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
LT-68]
gi|323939716|gb|EGB35919.1| CobW/HypB/UreG [Escherichia coli E482]
gi|323955308|gb|EGB51080.1| CobW/HypB/UreG [Escherichia coli H263]
gi|323960210|gb|EGB55853.1| CobW/HypB/UreG [Escherichia coli H489]
gi|323969442|gb|EGB64736.1| CobW/HypB/UreG [Escherichia coli TA007]
gi|324115284|gb|EGC09248.1| CobW/HypB/UreG [Escherichia fergusonii B253]
gi|326345333|gb|EGD69076.1| Putative metal chaperone, involved in Zn homeostasis, GTPase of
COG0523 family [Escherichia coli O157:H7 str. 1125]
gi|326346813|gb|EGD70547.1| Putative metal chaperone, involved in Zn homeostasis, GTPase of
COG0523 family [Escherichia coli O157:H7 str. 1044]
gi|331040139|gb|EGI12346.1| putative cobalamin synthesis protein [Escherichia coli H736]
gi|331066378|gb|EGI38255.1| putative cobalamin synthesis protein [Escherichia coli TA271]
gi|332346399|gb|AEE59733.1| nucleotide-binding domain protein [Escherichia coli UMNK88]
gi|333010426|gb|EGK29859.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
flexneri VA-6]
gi|333011309|gb|EGK30723.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
flexneri K-272]
gi|333012205|gb|EGK31587.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
flexneri K-227]
gi|335572403|gb|EGM58783.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
flexneri J1713]
gi|345384030|gb|EGX13899.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
G58-1]
gi|345388641|gb|EGX18451.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
TX1999]
gi|371608550|gb|EHN97106.1| hypothetical protein ESPG_02723 [Escherichia coli H397]
gi|374361789|gb|AEZ43496.1| putative GTP-binding protein YjiA [Escherichia coli O55:H7 str.
RM12579]
gi|377837346|gb|EHU02479.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC1C]
gi|377837476|gb|EHU02608.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC1A]
gi|377839526|gb|EHU04608.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC1B]
gi|377865023|gb|EHU29815.1| hypothetical protein ECDEC1D_0312 [Escherichia coli DEC1D]
gi|377867629|gb|EHU32383.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC1E]
gi|377869100|gb|EHU33817.1| hypothetical protein ECDEC2A_0126 [Escherichia coli DEC2A]
gi|377870326|gb|EHU35011.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC2C]
gi|377880688|gb|EHU45254.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC2B]
gi|377884227|gb|EHU48743.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC2E]
gi|377884657|gb|EHU49165.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC2D]
gi|377887623|gb|EHU52100.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC3A]
gi|377888618|gb|EHU53089.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC3B]
gi|377903881|gb|EHU68169.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC3D]
gi|377915214|gb|EHU79323.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC3C]
gi|377921681|gb|EHU85676.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC3E]
gi|377922132|gb|EHU86124.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC4A]
gi|377925629|gb|EHU89569.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC4B]
gi|377933715|gb|EHU97559.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC3F]
gi|377936068|gb|EHU99862.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC4D]
gi|377936448|gb|EHV00242.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC4C]
gi|377942467|gb|EHV06201.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC4E]
gi|377953058|gb|EHV16639.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC4F]
gi|377955000|gb|EHV18558.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC5A]
gi|377968066|gb|EHV31460.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC5C]
gi|377974502|gb|EHV37829.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC5B]
gi|377978704|gb|EHV41983.1| hypothetical protein ECDEC5E_5495 [Escherichia coli DEC5E]
gi|377983411|gb|EHV46655.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC5D]
gi|377987208|gb|EHV50395.1| hypothetical protein ECDEC6A_5203 [Escherichia coli DEC6A]
gi|378002565|gb|EHV65616.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC6B]
gi|378019190|gb|EHV82021.1| hypothetical protein ECDEC7A_0035 [Escherichia coli DEC7A]
gi|378028504|gb|EHV91121.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC7C]
gi|378031790|gb|EHV94373.1| hypothetical protein ECDEC7E_5012 [Escherichia coli DEC7E]
gi|378034046|gb|EHV96612.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC7D]
gi|378064410|gb|EHW26570.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC8C]
gi|378069915|gb|EHW31998.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC8D]
gi|378108665|gb|EHW70277.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC10A]
gi|378110334|gb|EHW71929.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC10D]
gi|378118525|gb|EHW80027.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC10B]
gi|378120345|gb|EHW81826.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC10C]
gi|378162866|gb|EHX23822.1| hypothetical protein ECDEC12C_5379 [Escherichia coli DEC12C]
gi|378176279|gb|EHX37085.1| hypothetical protein ECDEC12A_0065 [Escherichia coli DEC12A]
gi|378176647|gb|EHX37452.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC12B]
gi|378177391|gb|EHX38186.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC12D]
gi|378194224|gb|EHX54739.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC12E]
gi|385540369|gb|EIF87190.1| hypothetical protein ESMG_00497 [Escherichia coli M919]
gi|385713853|gb|EIG50780.1| hypothetical protein ESSG_00270 [Escherichia coli H730]
gi|386123884|gb|EIG72471.1| hypothetical protein ESBG_03778 [Escherichia sp. 4_1_40B]
gi|386233869|gb|EII65849.1| CobW/P47K family protein [Escherichia coli 2.4168]
gi|386251662|gb|EIJ01354.1| CobW/P47K family protein [Escherichia coli B41]
gi|386260947|gb|EIJ16415.1| CobW/P47K family protein [Escherichia coli 900105 (10e)]
gi|386799008|gb|AFJ32042.1| putative GTP-binding protein YjiA [Escherichia coli Xuzhou21]
gi|388353074|gb|EIL18156.1| putative GTP-binding protein YjiA [Escherichia coli O111:H11 str.
CVM9534]
gi|388369385|gb|EIL32989.1| putative GTP-binding protein YjiA [Escherichia coli O111:H11 str.
CVM9545]
gi|388375919|gb|EIL38898.1| putative GTP-binding protein YjiA [Escherichia coli O26:H11 str.
CVM9942]
gi|388381511|gb|EIL44078.1| hypothetical protein ECO10026_29219 [Escherichia coli O26:H11 str.
CVM10026]
gi|388390777|gb|EIL52253.1| putative GTP-binding protein YjiA [Escherichia coli KD1]
gi|388410201|gb|EIL70447.1| putative GTP-binding protein YjiA [Escherichia coli 75]
gi|390636087|gb|EIN15685.1| hypothetical protein ECFDA505_5630 [Escherichia coli FDA505]
gi|390651931|gb|EIN30197.1| hypothetical protein ECFRIK1996_0034 [Escherichia coli FRIK1996]
gi|390654322|gb|EIN32369.1| hypothetical protein ECFDA517_0033 [Escherichia coli FDA517]
gi|390654970|gb|EIN32963.1| hypothetical protein ECFRIK1985_5923 [Escherichia coli FRIK1985]
gi|390657136|gb|EIN34962.1| hypothetical protein ECFRIK1990_5826 [Escherichia coli FRIK1990]
gi|390671115|gb|EIN47597.1| hypothetical protein EC93001_0035 [Escherichia coli 93-001]
gi|390675926|gb|EIN52042.1| hypothetical protein ECPA5_5609 [Escherichia coli PA5]
gi|390690121|gb|EIN65016.1| hypothetical protein ECPA3_0034 [Escherichia coli PA3]
gi|390690539|gb|EIN65329.1| hypothetical protein ECPA10_5955 [Escherichia coli PA10]
gi|390694094|gb|EIN68706.1| hypothetical protein ECPA9_0074 [Escherichia coli PA9]
gi|390694997|gb|EIN69550.1| hypothetical protein ECPA14_5785 [Escherichia coli PA14]
gi|390712463|gb|EIN85418.1| hypothetical protein ECPA15_0076 [Escherichia coli PA15]
gi|390714969|gb|EIN87837.1| hypothetical protein ECPA24_5521 [Escherichia coli PA24]
gi|390717002|gb|EIN89794.1| hypothetical protein ECPA25_5492 [Escherichia coli PA25]
gi|390721750|gb|EIN94444.1| hypothetical protein ECPA22_0140 [Escherichia coli PA22]
gi|390735544|gb|EIO06931.1| hypothetical protein ECPA31_5578 [Escherichia coli PA31]
gi|390735771|gb|EIO07140.1| hypothetical protein ECPA32_5659 [Escherichia coli PA32]
gi|390738491|gb|EIO09703.1| hypothetical protein ECPA28_0076 [Escherichia coli PA28]
gi|390739773|gb|EIO10933.1| hypothetical protein ECPA33_5637 [Escherichia coli PA33]
gi|390754563|gb|EIO24140.1| hypothetical protein ECPA39_5761 [Escherichia coli PA39]
gi|390760221|gb|EIO29559.1| hypothetical protein ECPA41_5802 [Escherichia coli PA41]
gi|390763207|gb|EIO32456.1| hypothetical protein ECPA40_0148 [Escherichia coli PA40]
gi|390778397|gb|EIO46155.1| hypothetical protein ECTW06591_5313 [Escherichia coli TW06591]
gi|390781477|gb|EIO49155.1| hypothetical protein ECPA42_0076 [Escherichia coli PA42]
gi|390795977|gb|EIO63253.1| hypothetical protein ECTW10246_0325 [Escherichia coli TW10246]
gi|390802690|gb|EIO69719.1| hypothetical protein ECTW11039_0078 [Escherichia coli TW11039]
gi|390812486|gb|EIO79162.1| hypothetical protein ECTW09109_0142 [Escherichia coli TW09109]
gi|390812759|gb|EIO79434.1| hypothetical protein ECTW07945_0068 [Escherichia coli TW07945]
gi|390819335|gb|EIO85669.1| hypothetical protein ECTW09195_5772 [Escherichia coli TW09195]
gi|390820130|gb|EIO86436.1| hypothetical protein ECTW10119_0329 [Escherichia coli TW10119]
gi|390821157|gb|EIO87356.1| hypothetical protein ECEC4203_5731 [Escherichia coli EC4203]
gi|390825162|gb|EIO91105.1| hypothetical protein ECTW09098_0018 [Escherichia coli TW09098]
gi|390826576|gb|EIO92412.1| hypothetical protein ECEC4196_5782 [Escherichia coli EC4196]
gi|390839098|gb|EIP03256.1| hypothetical protein ECTW14313_5611 [Escherichia coli TW14313]
gi|390846648|gb|EIP10223.1| hypothetical protein ECEC4421_5555 [Escherichia coli EC4421]
gi|390865052|gb|EIP27107.1| hypothetical protein ECEC4402_5716 [Escherichia coli EC4402]
gi|390872722|gb|EIP34002.1| hypothetical protein ECEC4422_0073 [Escherichia coli EC4422]
gi|390874063|gb|EIP35222.1| hypothetical protein ECEC4439_5681 [Escherichia coli EC4439]
gi|390878026|gb|EIP38915.1| hypothetical protein ECEC4013_0140 [Escherichia coli EC4013]
gi|390879414|gb|EIP40178.1| hypothetical protein ECEC4436_5632 [Escherichia coli EC4436]
gi|390890191|gb|EIP49872.1| hypothetical protein ECEC4448_5693 [Escherichia coli EC4448]
gi|390904684|gb|EIP63680.1| hypothetical protein ECEC1738_0142 [Escherichia coli EC1738]
gi|390912576|gb|EIP71228.1| hypothetical protein ECEC4437_0033 [Escherichia coli EC4437]
gi|390912644|gb|EIP71290.1| hypothetical protein ECEC1734_0074 [Escherichia coli EC1734]
gi|390913607|gb|EIP72178.1| hypothetical protein ECEC1845_5640 [Escherichia coli EC1845]
gi|390914444|gb|EIP72984.1| hypothetical protein ECEC1863_5396 [Escherichia coli EC1863]
gi|391243686|gb|EIQ02978.1| hypothetical protein SF285071_5151 [Shigella flexneri 2850-71]
gi|391261754|gb|EIQ20799.1| hypothetical protein SFK1770_0218 [Shigella flexneri K-1770]
gi|391300058|gb|EIQ57987.1| hypothetical protein ECEPECA12_5204 [Escherichia coli EPECa12]
gi|391315500|gb|EIQ73024.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
EPEC C342-62]
gi|394393043|gb|EJE69742.1| putative GTP-binding protein YjiA [Escherichia coli O26:H11 str.
CVM10224]
gi|394404188|gb|EJE79639.1| putative GTP-binding protein YjiA [Escherichia coli O26:H11 str.
CVM10021]
gi|394414315|gb|EJE88263.1| putative GTP-binding protein YjiA [Escherichia coli O111:H11 str.
CVM9553]
gi|394422552|gb|EJE95911.1| putative GTP-binding protein YjiA [Escherichia coli O111:H11 str.
CVM9455]
gi|394429464|gb|EJF01897.1| putative GTP-binding protein YjiA [Escherichia coli O26:H11 str.
CVM10030]
gi|394432480|gb|EJF04571.1| putative GTP-binding protein YjiA [Escherichia coli O26:H11 str.
CVM9952]
gi|404293076|gb|EEH72472.2| hypothetical protein ESCG_01130 [Escherichia sp. 1_1_43]
gi|408061323|gb|EKG95844.1| hypothetical protein ECFRIK920_5884 [Escherichia coli FRIK920]
gi|408073433|gb|EKH07742.1| hypothetical protein ECPA7_0447 [Escherichia coli PA7]
gi|408079291|gb|EKH13414.1| hypothetical protein ECFDA507_5725 [Escherichia coli FDA507]
gi|408087537|gb|EKH20977.1| hypothetical protein ECPA34_0075 [Escherichia coli PA34]
gi|408092152|gb|EKH25345.1| hypothetical protein ECFDA506_0398 [Escherichia coli FDA506]
gi|408104053|gb|EKH36376.1| hypothetical protein ECFDA504_0075 [Escherichia coli FDA504]
gi|408111560|gb|EKH43305.1| hypothetical protein ECFRIK1999_0061 [Escherichia coli FRIK1999]
gi|408117714|gb|EKH48892.1| hypothetical protein ECFRIK1997_0078 [Escherichia coli FRIK1997]
gi|408122941|gb|EKH53743.1| hypothetical protein ECNE1487_0196 [Escherichia coli NE1487]
gi|408131261|gb|EKH61303.1| hypothetical protein ECNE037_0077 [Escherichia coli NE037]
gi|408133316|gb|EKH63227.1| hypothetical protein ECFRIK2001_0322 [Escherichia coli FRIK2001]
gi|408134061|gb|EKH63909.1| hypothetical protein ECPA23_5665 [Escherichia coli PA23]
gi|408142419|gb|EKH71791.1| hypothetical protein ECPA4_0077 [Escherichia coli PA4]
gi|408155047|gb|EKH83374.1| hypothetical protein ECPA49_0076 [Escherichia coli PA49]
gi|408159916|gb|EKH87961.1| hypothetical protein ECPA45_0075 [Escherichia coli PA45]
gi|408168181|gb|EKH95627.1| hypothetical protein ECTT12B_0076 [Escherichia coli TT12B]
gi|408169318|gb|EKH96600.1| hypothetical protein ECCB7326_5722 [Escherichia coli CB7326]
gi|408174341|gb|EKI01326.1| hypothetical protein ECMA6_0191 [Escherichia coli MA6]
gi|408175898|gb|EKI02790.1| hypothetical protein EC5905_0130 [Escherichia coli 5905]
gi|408176004|gb|EKI02894.1| hypothetical protein ECEC96038_5609 [Escherichia coli EC96038]
gi|408193851|gb|EKI19365.1| hypothetical protein EC5412_0011 [Escherichia coli 5412]
gi|408208024|gb|EKI32699.1| hypothetical protein EC3006_4989 [Escherichia coli 3006]
gi|408208271|gb|EKI32924.1| hypothetical protein ECPA38_5492 [Escherichia coli PA38]
gi|408233965|gb|EKI57014.1| hypothetical protein ECEC1736_5610 [Escherichia coli EC1736]
gi|408235936|gb|EKI58858.1| hypothetical protein ECEC1737_5661 [Escherichia coli EC1737]
gi|408241309|gb|EKI63957.1| hypothetical protein ECEC1735_0033 [Escherichia coli EC1735]
gi|408242016|gb|EKI64620.1| hypothetical protein ECEC1846_5656 [Escherichia coli EC1846]
gi|408250875|gb|EKI72650.1| hypothetical protein ECEC1847_5679 [Escherichia coli EC1847]
gi|408261772|gb|EKI82733.1| hypothetical protein ECEC1849_5596 [Escherichia coli EC1849]
gi|408271809|gb|EKI91930.1| hypothetical protein ECEC1848_0139 [Escherichia coli EC1848]
gi|408272947|gb|EKI93014.1| hypothetical protein ECEC1856_5651 [Escherichia coli EC1856]
gi|408281023|gb|EKJ00465.1| hypothetical protein ECEC1862_5659 [Escherichia coli EC1862]
gi|408286535|gb|EKJ05456.1| hypothetical protein ECEC1850_0090 [Escherichia coli EC1850]
gi|408292100|gb|EKJ10672.1| hypothetical protein ECEC1865_5792 [Escherichia coli EC1865]
gi|408302351|gb|EKJ19884.1| hypothetical protein ECEC1864_0074 [Escherichia coli EC1864]
gi|408303466|gb|EKJ20927.1| hypothetical protein ECEC1866_5550 [Escherichia coli EC1866]
gi|408319839|gb|EKJ35953.1| hypothetical protein ECEC1868_0078 [Escherichia coli EC1868]
gi|408320463|gb|EKJ36560.1| hypothetical protein ECEC1870_5650 [Escherichia coli EC1870]
gi|408332709|gb|EKJ47723.1| hypothetical protein ECEC1869_0075 [Escherichia coli EC1869]
gi|408333088|gb|EKJ48061.1| hypothetical protein ECFRIK523_5648 [Escherichia coli FRIK523]
gi|408338250|gb|EKJ52898.1| hypothetical protein ECNE098_0075 [Escherichia coli NE098]
gi|408340571|gb|EKJ55057.1| hypothetical protein EC01304_5797 [Escherichia coli 0.1304]
gi|408459795|gb|EKJ83576.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
AD30]
gi|408560536|gb|EKK36799.1| hypothetical protein EC52239_0074 [Escherichia coli 5.2239]
gi|408561215|gb|EKK37454.1| hypothetical protein EC34870_0074 [Escherichia coli 3.4870]
gi|408561694|gb|EKK37894.1| hypothetical protein EC60172_0075 [Escherichia coli 6.0172]
gi|408576678|gb|EKK52268.1| hypothetical protein EC82524_5609 [Escherichia coli 8.2524]
gi|408586373|gb|EKK61151.1| hypothetical protein EC80586_0077 [Escherichia coli 8.0586]
gi|408587398|gb|EKK62049.1| hypothetical protein EC100869_5503 [Escherichia coli 10.0869]
gi|408593693|gb|EKK68001.1| hypothetical protein EC100833_0143 [Escherichia coli 10.0833]
gi|408597857|gb|EKK71827.1| hypothetical protein EC80416_5244 [Escherichia coli 8.0416]
gi|408614447|gb|EKK87726.1| hypothetical protein EC880221_0140 [Escherichia coli 88.0221]
gi|408618156|gb|EKK91243.1| hypothetical protein EC100821_0075 [Escherichia coli 10.0821]
gi|421945079|gb|EKU02306.1| putative GTP-binding protein YjiA [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421948499|gb|EKU05514.1| putative GTP-binding protein YjiA [Escherichia coli O111:H11 str.
CFSAN001630]
gi|427200280|gb|EKV70714.1| hypothetical protein EC890511_5646 [Escherichia coli 89.0511]
gi|427216000|gb|EKV85158.1| hypothetical protein EC881042_0074 [Escherichia coli 88.1042]
gi|427219874|gb|EKV88827.1| hypothetical protein EC881467_0071 [Escherichia coli 88.1467]
gi|427222775|gb|EKV91539.1| hypothetical protein EC900039_5506 [Escherichia coli 90.0039]
gi|427235562|gb|EKW03177.1| hypothetical protein EC902281_0075 [Escherichia coli 90.2281]
gi|427236724|gb|EKW04285.1| hypothetical protein EC930055_5543 [Escherichia coli 93.0055]
gi|427238314|gb|EKW05832.1| hypothetical protein EC900091_0142 [Escherichia coli 90.0091]
gi|427241103|gb|EKW08548.1| hypothetical protein EC940618_5496 [Escherichia coli 94.0618]
gi|427252601|gb|EKW19085.1| hypothetical protein EC930056_0075 [Escherichia coli 93.0056]
gi|427256081|gb|EKW22299.1| hypothetical protein EC951288_5425 [Escherichia coli 95.1288]
gi|427271852|gb|EKW36636.1| hypothetical protein EC950943_0073 [Escherichia coli 95.0943]
gi|427272074|gb|EKW36827.1| hypothetical protein EC950183_0062 [Escherichia coli 95.0183]
gi|427273163|gb|EKW37853.1| hypothetical protein EC960427_5665 [Escherichia coli 96.0427]
gi|427279555|gb|EKW43967.1| hypothetical protein EC960939_5725 [Escherichia coli 96.0939]
gi|427287608|gb|EKW51363.1| hypothetical protein EC960428_0076 [Escherichia coli 96.0428]
gi|427305479|gb|EKW68073.1| hypothetical protein EC970003_0075 [Escherichia coli 97.0003]
gi|427309103|gb|EKW71430.1| hypothetical protein EC970007_5057 [Escherichia coli 97.0007]
gi|427312575|gb|EKW74727.1| hypothetical protein EC960107_0074 [Escherichia coli 96.0107]
gi|427314089|gb|EKW76154.1| hypothetical protein EC990672_5721 [Escherichia coli 99.0672]
gi|427335289|gb|EKW96319.1| hypothetical protein EC990713_0074 [Escherichia coli 99.0713]
gi|427335687|gb|EKW96716.1| hypothetical protein EC990678_0139 [Escherichia coli 99.0678]
gi|429249785|gb|EKY34473.1| hypothetical protein EC960109_5743 [Escherichia coli 96.0109]
gi|429249855|gb|EKY34542.1| hypothetical protein EC970010_5715 [Escherichia coli 97.0010]
gi|430890467|gb|ELC13104.1| GTPase [Escherichia coli KTE10]
gi|430892143|gb|ELC14635.1| GTPase [Escherichia coli KTE11]
gi|430939437|gb|ELC59653.1| GTPase [Escherichia coli KTE39]
gi|430945301|gb|ELC65375.1| GTPase [Escherichia coli KTE44]
gi|430957980|gb|ELC76583.1| GTPase [Escherichia coli KTE187]
gi|430968675|gb|ELC85899.1| GTPase [Escherichia coli KTE188]
gi|430975710|gb|ELC92599.1| GTPase [Escherichia coli KTE193]
gi|430986652|gb|ELD03218.1| GTPase [Escherichia coli KTE201]
gi|430988471|gb|ELD04964.1| GTPase [Escherichia coli KTE205]
gi|431020129|gb|ELD33514.1| GTPase [Escherichia coli KTE212]
gi|431029544|gb|ELD42575.1| GTPase [Escherichia coli KTE214]
gi|431033873|gb|ELD45823.1| GTPase [Escherichia coli KTE216]
gi|431056183|gb|ELD65705.1| GTPase [Escherichia coli KTE230]
gi|431065634|gb|ELD74397.1| GTPase [Escherichia coli KTE234]
gi|431087681|gb|ELD93602.1| GTPase [Escherichia coli KTE47]
gi|431101279|gb|ELE06200.1| GTPase [Escherichia coli KTE51]
gi|431103686|gb|ELE08325.1| GTPase [Escherichia coli KTE53]
gi|431109971|gb|ELE13909.1| GTPase [Escherichia coli KTE56]
gi|431124835|gb|ELE27283.1| GTPase [Escherichia coli KTE58]
gi|431134126|gb|ELE36090.1| GTPase [Escherichia coli KTE60]
gi|431142960|gb|ELE44706.1| GTPase [Escherichia coli KTE67]
gi|431166393|gb|ELE66709.1| GTPase [Escherichia coli KTE77]
gi|431175363|gb|ELE75383.1| GTPase [Escherichia coli KTE81]
gi|431215056|gb|ELF12795.1| GTPase [Escherichia coli KTE119]
gi|431226099|gb|ELF23278.1| GTPase [Escherichia coli KTE156]
gi|431232873|gb|ELF28476.1| GTPase [Escherichia coli KTE161]
gi|431238356|gb|ELF33278.1| GTPase [Escherichia coli KTE162]
gi|431247900|gb|ELF42109.1| GTPase [Escherichia coli KTE171]
gi|431288244|gb|ELF79019.1| GTPase [Escherichia coli KTE42]
gi|431298200|gb|ELF87835.1| GTPase [Escherichia coli KTE22]
gi|431320562|gb|ELG08201.1| GTPase [Escherichia coli KTE50]
gi|431332417|gb|ELG19646.1| GTPase [Escherichia coli KTE59]
gi|431334070|gb|ELG21245.1| GTPase [Escherichia coli KTE65]
gi|431358206|gb|ELG44864.1| GTPase [Escherichia coli KTE101]
gi|431371679|gb|ELG57386.1| GTPase [Escherichia coli KTE118]
gi|431376619|gb|ELG61941.1| GTPase [Escherichia coli KTE123]
gi|431398981|gb|ELG82400.1| GTPase [Escherichia coli KTE141]
gi|431415427|gb|ELG97971.1| GTPase [Escherichia coli KTE154]
gi|431449601|gb|ELH30173.1| GTPase [Escherichia coli KTE173]
gi|431450876|gb|ELH31357.1| GTPase [Escherichia coli KTE175]
gi|431474319|gb|ELH54138.1| GTPase [Escherichia coli KTE197]
gi|431483545|gb|ELH63235.1| GTPase [Escherichia coli KTE202]
gi|431483604|gb|ELH63293.1| GTPase [Escherichia coli KTE209]
gi|431499353|gb|ELH78532.1| GTPase [Escherichia coli KTE211]
gi|431512367|gb|ELH90494.1| GTPase [Escherichia coli KTE218]
gi|431518442|gb|ELH95896.1| GTPase [Escherichia coli KTE227]
gi|431543406|gb|ELI18388.1| GTPase [Escherichia coli KTE112]
gi|431559884|gb|ELI33418.1| GTPase [Escherichia coli KTE120]
gi|431575563|gb|ELI48294.1| GTPase [Escherichia coli KTE124]
gi|431576309|gb|ELI48999.1| GTPase [Escherichia coli KTE125]
gi|431578996|gb|ELI51581.1| GTPase [Escherichia coli KTE129]
gi|431609653|gb|ELI78968.1| GTPase [Escherichia coli KTE139]
gi|431611218|gb|ELI80497.1| GTPase [Escherichia coli KTE137]
gi|431620831|gb|ELI89655.1| GTPase [Escherichia coli KTE148]
gi|431627734|gb|ELI96124.1| GTPase [Escherichia coli KTE153]
gi|431636540|gb|ELJ04670.1| GTPase [Escherichia coli KTE157]
gi|431664235|gb|ELJ30975.1| GTPase [Escherichia coli KTE166]
gi|431679551|gb|ELJ45462.1| GTPase [Escherichia coli KTE176]
gi|431684465|gb|ELJ50072.1| GTPase [Escherichia coli KTE232]
gi|431698713|gb|ELJ63738.1| GTPase [Escherichia coli KTE85]
gi|431726463|gb|ELJ90272.1| GTPase [Escherichia coli KTE97]
gi|431736570|gb|ELJ99894.1| GTPase [Escherichia coli KTE99]
gi|432344650|gb|ELL39224.1| putative GTP-binding protein YjiA [Escherichia coli J96]
gi|441606063|emb|CCP97441.1| Putative metal chaperone, involved in Zn homeostasis, GTPase of
COG0523 family [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|441651527|emb|CCQ02908.1| Putative metal chaperone, involved in Zn homeostasis, GTPase of
COG0523 family [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|444534118|gb|ELV14392.1| hypothetical protein EC990814_5126 [Escherichia coli 99.0814]
gi|444544324|gb|ELV23385.1| hypothetical protein EC990815_5102 [Escherichia coli 99.0815]
gi|444552262|gb|ELV30100.1| hypothetical protein EC09BKT78844_0015 [Escherichia coli
09BKT078844]
gi|444553121|gb|ELV30773.1| hypothetical protein EC990816_5209 [Escherichia coli 99.0816]
gi|444553398|gb|ELV31015.1| hypothetical protein EC990839_5121 [Escherichia coli 99.0839]
gi|444557965|gb|ELV35279.1| hypothetical protein EC990848_5134 [Escherichia coli 99.0848]
gi|444567460|gb|ELV44221.1| hypothetical protein EC991753_5136 [Escherichia coli 99.1753]
gi|444570546|gb|ELV47070.1| hypothetical protein EC991775_5020 [Escherichia coli 99.1775]
gi|444585905|gb|ELV61441.1| hypothetical protein EC991805_5046 [Escherichia coli 99.1805]
gi|444587053|gb|ELV62523.1| hypothetical protein EC991793_0065 [Escherichia coli 99.1793]
gi|444587918|gb|ELV63319.1| hypothetical protein ECATCC700728_5101 [Escherichia coli ATCC
700728]
gi|444601219|gb|ELV76026.1| hypothetical protein ECPA11_0073 [Escherichia coli PA11]
gi|444601851|gb|ELV76612.1| hypothetical protein ECPA19_5261 [Escherichia coli PA19]
gi|444602000|gb|ELV76755.1| hypothetical protein ECPA13_4959 [Escherichia coli PA13]
gi|444603469|gb|ELV78172.1| hypothetical protein ECPA19_4621 [Escherichia coli PA19]
gi|444617220|gb|ELV91340.1| hypothetical protein ECPA47_5090 [Escherichia coli PA47]
gi|444618834|gb|ELV92899.1| hypothetical protein ECPA48_4973 [Escherichia coli PA48]
gi|444624992|gb|ELV98863.1| hypothetical protein ECPA2_0073 [Escherichia coli PA2]
gi|444639163|gb|ELW12482.1| hypothetical protein ECPA8_0072 [Escherichia coli PA8]
gi|444651119|gb|ELW23928.1| hypothetical protein EC991781_0062 [Escherichia coli 99.1781]
gi|444655146|gb|ELW27765.1| hypothetical protein EC991762_0073 [Escherichia coli 99.1762]
gi|444655838|gb|ELW28376.1| hypothetical protein EC34880_5189 [Escherichia coli 3.4880]
gi|444657540|gb|ELW30012.1| hypothetical protein EC950083_5083 [Escherichia coli 95.0083]
gi|444664321|gb|ELW36509.1| hypothetical protein ECPA35_0127 [Escherichia coli PA35]
gi|444674949|gb|ELW46430.1| hypothetical protein EC990670_0075 [Escherichia coli 99.0670]
Length = 318
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 315
>gi|420339252|ref|ZP_14840800.1| hypothetical protein SFK315_5084 [Shigella flexneri K-315]
gi|391256351|gb|EIQ15483.1| hypothetical protein SFK315_5084 [Shigella flexneri K-315]
Length = 318
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDHLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--QLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|424523460|ref|ZP_17967529.1| hypothetical protein ECTW14301_5508 [Escherichia coli TW14301]
gi|429036110|ref|ZP_19101591.1| hypothetical protein EC960932_0138 [Escherichia coli 96.0932]
gi|445021366|ref|ZP_21337300.1| hypothetical protein EC71982_0082 [Escherichia coli 7.1982]
gi|390841457|gb|EIP05375.1| hypothetical protein ECTW14301_5508 [Escherichia coli TW14301]
gi|427308101|gb|EKW70517.1| hypothetical protein EC960932_0138 [Escherichia coli 96.0932]
gi|444648957|gb|ELW21863.1| hypothetical protein EC71982_0082 [Escherichia coli 7.1982]
Length = 318
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLCE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 315
>gi|91214003|ref|YP_543989.1| GTP-binding protein YjiA [Escherichia coli UTI89]
gi|91075577|gb|ABE10458.1| hypothetical protein YjiA [Escherichia coli UTI89]
Length = 331
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 143/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 73 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 132
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + ++ QV YADRI+L K D+ E E L E
Sbjct: 133 RYLLDGVIALVDAVHADEQMNQ----FTIAQS--QVGYADRILLTKTDVAGEAE--KLRE 184
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 185 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 226
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 227 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 286
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 287 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 328
>gi|425308164|ref|ZP_18697810.1| hypothetical protein ECN1_4542 [Escherichia coli N1]
gi|408223611|gb|EKI47374.1| hypothetical protein ECN1_4542 [Escherichia coli N1]
Length = 318
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|407780622|ref|ZP_11127843.1| cobalamin synthesis protein [Oceanibaculum indicum P24]
gi|407208849|gb|EKE78756.1| cobalamin synthesis protein [Oceanibaculum indicum P24]
Length = 371
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/304 (35%), Positives = 159/304 (52%), Gaps = 32/304 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL----AKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVS 57
+N+GCLCCTVRGDLV L L AK++ F +VIETTGLA PAP++ T TD +++
Sbjct: 60 LNSGCLCCTVRGDLVTTLRDLHIKRAKQEISSFKRLVIETTGLADPAPILHTLMTDPMLA 119
Query: 58 QYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTET----EL 113
Y +LDGVIT+VD+ + L+ EAV+Q A ADR++L K DLV + +L
Sbjct: 120 SYYRLDGVITVVDAVNGEATLDNHM------EAVKQAAVADRLVLTKTDLVKDPASARDL 173
Query: 114 GSLTERIKHINAMAPVKLAKYGSVDMDFVLGVGGYD--------LERIDSEVHVDNSHCA 165
+L R+ +N AP A G ++ + + G YD L + E + D SH
Sbjct: 174 EALERRLAQLNPAAPRLRAVQGEIEPEVLFNAGLYDPTLKTPDVLRWLKEEAYAD-SHAH 232
Query: 166 THHHESAHGHHEGHHHN------HMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGED 219
H H HH + + HD V + IV + +D ++E LI +GE+
Sbjct: 233 HDHDHDHGHDHHHHHGHDHHHDVNRHDDHVRAFCIVLDRPIDAMAFSLFIEMLIATRGEN 292
Query: 220 LYRMKGILSVSG-SEQQYVFQGVHSTLDGCPG-KAWGPDEKRINKLVFIGRNLDETALRK 277
L R+KGIL+++ +Q V GV +AW P E R ++LVFI R++ E +R+
Sbjct: 293 LLRVKGILNIADRPDQPAVIHGVQHVFHPVAWLEAW-PSEDRRSRLVFITRDVPEDDIRQ 351
Query: 278 GFKG 281
+
Sbjct: 352 LIRA 355
>gi|188532649|ref|YP_001906446.1| GTP-binding protein YjiA [Erwinia tasmaniensis Et1/99]
gi|188027691|emb|CAO95543.1| Putative cobalamin synthesis protein [Erwinia tasmaniensis Et1/99]
Length = 320
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 144/282 (51%), Gaps = 29/282 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL---AKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CCT G+L LL++ + + FD +VIE TG+A P P+I+TF + +++ Q
Sbjct: 60 LANGCICCTRSGELETALLEMLDGIDRGELAFDRLVIECTGMADPGPIIQTFFSHDMLCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVITLVD+ HA Q ++ RF + ++ QV YADRI+L+K D+ +L +
Sbjct: 120 RYLLDGVITLVDAVHAGQQMD----RFPIAQS--QVGYADRILLSKTDIAGAVP--ALMQ 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ INA APV G +D+ + +GG+ LE + AT
Sbjct: 172 RLQRINARAPVYPVVKGDIDLSLLFNIGGFMLE---------DRVVATMPR--------- 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H+ + V+S+ + L LD V +E L+ + L R KG+L + + +F
Sbjct: 214 LHYIPEQQTEVTSLVLELGYPLALDAVSKVMEELLAGFADRLLRYKGMLWIKEMPCRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV + W PDE+ LVFIG L E +R F
Sbjct: 274 QGVQRLYSADWDREWQPDEQPGCTLVFIGMRLPEEQIRAAFS 315
>gi|193070139|ref|ZP_03051085.1| CobW/P47K family protein [Escherichia coli E110019]
gi|218561529|ref|YP_002394442.1| GTP-binding protein YjiA [Escherichia coli S88]
gi|312970041|ref|ZP_07784223.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
1827-70]
gi|417616135|ref|ZP_12266577.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
STEC_EH250]
gi|432365745|ref|ZP_19608887.1| GTPase [Escherichia coli KTE5]
gi|192956592|gb|EDV87049.1| CobW/P47K family protein [Escherichia coli E110019]
gi|218368298|emb|CAR06117.1| putative GTPase [Escherichia coli S88]
gi|310337539|gb|EFQ02650.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
1827-70]
gi|345355994|gb|EGW88202.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
STEC_EH250]
gi|430881663|gb|ELC04877.1| GTPase [Escherichia coli KTE5]
Length = 318
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEVE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDKIRAAFAG 315
>gi|215489663|ref|YP_002332094.1| GTP-binding protein YjiA [Escherichia coli O127:H6 str. E2348/69]
gi|293417813|ref|ZP_06660435.1| GTP-binding protein YjiA [Escherichia coli B185]
gi|331666007|ref|ZP_08366901.1| putative cobalamin synthesis protein [Escherichia coli TA143]
gi|331681331|ref|ZP_08381968.1| putative cobalamin synthesis protein [Escherichia coli H299]
gi|386602400|ref|YP_006103906.1| CobW/P47K family protein [Escherichia coli IHE3034]
gi|386607035|ref|YP_006113335.1| putative GTP-binding protein YjiA [Escherichia coli UM146]
gi|415832227|ref|ZP_11517724.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
OK1357]
gi|415837882|ref|ZP_11519865.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
RN587/1]
gi|417142694|ref|ZP_11985075.1| CobW/P47K family protein [Escherichia coli 97.0259]
gi|417280673|ref|ZP_12067973.1| CobW/P47K family protein [Escherichia coli 3003]
gi|417584741|ref|ZP_12235525.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
STEC_C165-02]
gi|419373075|ref|ZP_13914170.1| hypothetical protein ECDEC14A_4879 [Escherichia coli DEC14A]
gi|422331118|ref|ZP_16412134.1| hypothetical protein HMPREF0986_00628 [Escherichia coli 4_1_47FAA]
gi|422750664|ref|ZP_16804574.1| CobW/HypB/UreG [Escherichia coli H252]
gi|422768189|ref|ZP_16821914.1| CobW/HypB/UreG [Escherichia coli E1520]
gi|422971665|ref|ZP_16974940.1| hypothetical protein ESRG_01574 [Escherichia coli TA124]
gi|424817670|ref|ZP_18242821.1| putative GTP-binding protein YjiA [Escherichia fergusonii ECD227]
gi|425280802|ref|ZP_18672007.1| hypothetical protein ECARS42123_4901 [Escherichia coli ARS4.2123]
gi|425298110|ref|ZP_18688168.1| hypothetical protein EC07798_0037 [Escherichia coli 07798]
gi|425425410|ref|ZP_18806545.1| hypothetical protein EC01288_4761 [Escherichia coli 0.1288]
gi|432395784|ref|ZP_19638578.1| GTPase [Escherichia coli KTE25]
gi|432409466|ref|ZP_19652162.1| GTPase [Escherichia coli KTE28]
gi|432419996|ref|ZP_19662558.1| GTPase [Escherichia coli KTE178]
gi|432520601|ref|ZP_19757773.1| GTPase [Escherichia coli KTE228]
gi|432571783|ref|ZP_19808278.1| GTPase [Escherichia coli KTE55]
gi|432708781|ref|ZP_19943852.1| GTPase [Escherichia coli KTE6]
gi|432721541|ref|ZP_19956471.1| GTPase [Escherichia coli KTE17]
gi|432725944|ref|ZP_19960841.1| GTPase [Escherichia coli KTE18]
gi|432739720|ref|ZP_19974443.1| GTPase [Escherichia coli KTE23]
gi|432773091|ref|ZP_20007395.1| GTPase [Escherichia coli KTE54]
gi|432791088|ref|ZP_20025205.1| GTPase [Escherichia coli KTE78]
gi|432797077|ref|ZP_20031107.1| GTPase [Escherichia coli KTE79]
gi|432818158|ref|ZP_20051885.1| GTPase [Escherichia coli KTE115]
gi|432858120|ref|ZP_20084735.1| GTPase [Escherichia coli KTE146]
gi|432909453|ref|ZP_20116785.1| GTPase [Escherichia coli KTE190]
gi|432988886|ref|ZP_20177559.1| GTPase [Escherichia coli KTE217]
gi|433010695|ref|ZP_20199100.1| GTPase [Escherichia coli KTE229]
gi|433021625|ref|ZP_20209688.1| GTPase [Escherichia coli KTE105]
gi|433113670|ref|ZP_20299504.1| GTPase [Escherichia coli KTE150]
gi|433161570|ref|ZP_20346369.1| GTPase [Escherichia coli KTE177]
gi|433166492|ref|ZP_20351197.1| GTPase [Escherichia coli KTE179]
gi|433171469|ref|ZP_20356072.1| GTPase [Escherichia coli KTE180]
gi|450184822|ref|ZP_21888732.1| putative GTP-binding protein YjiA [Escherichia coli SEPT362]
gi|215267735|emb|CAS12196.1| predicted GTPase [Escherichia coli O127:H6 str. E2348/69]
gi|291430531|gb|EFF03529.1| GTP-binding protein YjiA [Escherichia coli B185]
gi|294492034|gb|ADE90790.1| CobW/P47K family protein [Escherichia coli IHE3034]
gi|307629519|gb|ADN73823.1| putative GTP-binding protein YjiA [Escherichia coli UM146]
gi|323181881|gb|EFZ67293.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
OK1357]
gi|323189803|gb|EFZ75081.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
RN587/1]
gi|323935286|gb|EGB31639.1| CobW/HypB/UreG [Escherichia coli E1520]
gi|323950564|gb|EGB46442.1| CobW/HypB/UreG [Escherichia coli H252]
gi|325498690|gb|EGC96549.1| putative GTP-binding protein YjiA [Escherichia fergusonii ECD227]
gi|331057058|gb|EGI29052.1| putative cobalamin synthesis protein [Escherichia coli TA143]
gi|331081552|gb|EGI52713.1| putative cobalamin synthesis protein [Escherichia coli H299]
gi|345342924|gb|EGW75316.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
STEC_C165-02]
gi|371598476|gb|EHN87276.1| hypothetical protein ESRG_01574 [Escherichia coli TA124]
gi|373247928|gb|EHP67364.1| hypothetical protein HMPREF0986_00628 [Escherichia coli 4_1_47FAA]
gi|378210721|gb|EHX71072.1| hypothetical protein ECDEC14A_4879 [Escherichia coli DEC14A]
gi|386154719|gb|EIH11077.1| CobW/P47K family protein [Escherichia coli 97.0259]
gi|386245002|gb|EII86732.1| CobW/P47K family protein [Escherichia coli 3003]
gi|408196210|gb|EKI21498.1| hypothetical protein ECARS42123_4901 [Escherichia coli ARS4.2123]
gi|408222263|gb|EKI46156.1| hypothetical protein EC07798_0037 [Escherichia coli 07798]
gi|408339725|gb|EKJ54264.1| hypothetical protein EC01288_4761 [Escherichia coli 0.1288]
gi|430919292|gb|ELC40233.1| GTPase [Escherichia coli KTE25]
gi|430924777|gb|ELC45453.1| GTPase [Escherichia coli KTE28]
gi|430948773|gb|ELC68360.1| GTPase [Escherichia coli KTE178]
gi|431046357|gb|ELD56471.1| GTPase [Escherichia coli KTE228]
gi|431112392|gb|ELE16082.1| GTPase [Escherichia coli KTE55]
gi|431253420|gb|ELF46899.1| GTPase [Escherichia coli KTE6]
gi|431269258|gb|ELF60616.1| GTPase [Escherichia coli KTE17]
gi|431277648|gb|ELF68653.1| GTPase [Escherichia coli KTE18]
gi|431287092|gb|ELF77910.1| GTPase [Escherichia coli KTE23]
gi|431322026|gb|ELG09618.1| GTPase [Escherichia coli KTE54]
gi|431343628|gb|ELG30586.1| GTPase [Escherichia coli KTE78]
gi|431347062|gb|ELG33956.1| GTPase [Escherichia coli KTE79]
gi|431359147|gb|ELG45792.1| GTPase [Escherichia coli KTE115]
gi|431409055|gb|ELG92231.1| GTPase [Escherichia coli KTE146]
gi|431449207|gb|ELH29782.1| GTPase [Escherichia coli KTE190]
gi|431499786|gb|ELH78803.1| GTPase [Escherichia coli KTE217]
gi|431518907|gb|ELH96359.1| GTPase [Escherichia coli KTE229]
gi|431525278|gb|ELI02076.1| GTPase [Escherichia coli KTE105]
gi|431622587|gb|ELI91275.1| GTPase [Escherichia coli KTE150]
gi|431670808|gb|ELJ37105.1| GTPase [Escherichia coli KTE177]
gi|431681018|gb|ELJ46825.1| GTPase [Escherichia coli KTE179]
gi|431681713|gb|ELJ47489.1| GTPase [Escherichia coli KTE180]
gi|449325552|gb|EMD15455.1| putative GTP-binding protein YjiA [Escherichia coli SEPT362]
Length = 318
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|117626664|ref|YP_859987.1| GTP-binding protein YjiA [Escherichia coli APEC O1]
gi|115515788|gb|ABJ03863.1| putative GTPase [Escherichia coli APEC O1]
Length = 346
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 88 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 147
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 148 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 199
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 200 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 241
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 242 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 301
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 302 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 343
>gi|74314777|ref|YP_313196.1| GTP-binding protein YjiA [Shigella sonnei Ss046]
gi|82546695|ref|YP_410642.1| GTP-binding protein YjiA [Shigella boydii Sb227]
gi|427807609|ref|ZP_18974676.1| hypothetical protein BN16_04101 [Escherichia coli chi7122]
gi|427812189|ref|ZP_18979254.1| hypothetical protein BN17_43591 [Escherichia coli]
gi|73858254|gb|AAZ90961.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81248106|gb|ABB68814.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|412965791|emb|CCK49724.1| hypothetical protein BN16_04101 [Escherichia coli chi7122]
gi|412972368|emb|CCJ47041.1| hypothetical protein BN17_43591 [Escherichia coli]
Length = 284
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 26 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 85
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 86 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 137
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 138 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 179
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 180 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 239
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 240 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 281
>gi|422832405|ref|ZP_16880474.1| hypothetical protein ESOG_00075 [Escherichia coli E101]
gi|371614554|gb|EHO03037.1| hypothetical protein ESOG_00075 [Escherichia coli E101]
Length = 318
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFILE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 315
>gi|332281119|ref|ZP_08393532.1| conserved hypothetical protein [Shigella sp. D9]
gi|332103471|gb|EGJ06817.1| conserved hypothetical protein [Shigella sp. D9]
Length = 331
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 143/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 73 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 132
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + ++ QV YADRI+L K D+ E E L E
Sbjct: 133 RYLLDGVIALVDAVHADEQMNQ----FTIAQS--QVGYADRILLTKTDVAGEAE--KLRE 184
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 185 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 226
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 227 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 286
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 287 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 328
>gi|417599966|ref|ZP_12250578.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
3030-1]
gi|345345687|gb|EGW78024.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
3030-1]
Length = 318
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRSAFAG 315
>gi|38112618|gb|AAR11353.1| YjiA [Escherichia coli]
Length = 284
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 26 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 85
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 86 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 137
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 138 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 179
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 180 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 239
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 240 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 281
>gi|432389841|ref|ZP_19632709.1| GTPase [Escherichia coli KTE21]
gi|432678350|ref|ZP_19913757.1| GTPase [Escherichia coli KTE143]
gi|430924141|gb|ELC44869.1| GTPase [Escherichia coli KTE21]
gi|431225733|gb|ELF22923.1| GTPase [Escherichia coli KTE143]
Length = 318
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFITDKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 315
>gi|383181656|ref|YP_005459661.1| putative GTP-binding protein YjiA [Shigella sonnei 53G]
gi|414579198|ref|ZP_11436354.1| hypothetical protein SS323385_5089 [Shigella sonnei 3233-85]
gi|415849615|ref|ZP_11526735.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella sonnei
53G]
gi|418261333|ref|ZP_12883327.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella sonnei
str. Moseley]
gi|420356419|ref|ZP_14857446.1| hypothetical protein SS322685_0195 [Shigella sonnei 3226-85]
gi|420366373|ref|ZP_14867223.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella sonnei
4822-66]
gi|323166143|gb|EFZ51921.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella sonnei
53G]
gi|391279150|gb|EIQ37839.1| hypothetical protein SS323385_5089 [Shigella sonnei 3233-85]
gi|391290527|gb|EIQ48986.1| hypothetical protein SS322685_0195 [Shigella sonnei 3226-85]
gi|391290969|gb|EIQ49392.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella sonnei
4822-66]
gi|397903562|gb|EJL19857.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella sonnei
str. Moseley]
Length = 318
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|157163788|ref|YP_001461106.1| GTP-binding protein YjiA [Escherichia coli HS]
gi|260871066|ref|YP_003237468.1| putative GTPase [Escherichia coli O111:H- str. 11128]
gi|300823793|ref|ZP_07103918.1| CobW/P47K family protein [Escherichia coli MS 119-7]
gi|300905324|ref|ZP_07123095.1| CobW/P47K family protein [Escherichia coli MS 84-1]
gi|301303438|ref|ZP_07209561.1| CobW/P47K family protein [Escherichia coli MS 124-1]
gi|309795616|ref|ZP_07690032.1| CobW/P47K family protein [Escherichia coli MS 145-7]
gi|415823742|ref|ZP_11512117.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
OK1180]
gi|415863381|ref|ZP_11536672.1| CobW/P47K family protein [Escherichia coli MS 85-1]
gi|416276129|ref|ZP_11644045.1| putative metal chaperone, involved in Zn homeostasis, GTPase of
COG0523 family [Shigella dysenteriae CDC 74-1112]
gi|416304254|ref|ZP_11653857.1| Putative metal chaperone, involved in Zn homeostasis, GTPase of
COG0523 family [Shigella flexneri CDC 796-83]
gi|416343161|ref|ZP_11677165.1| Putative metal chaperone, involved in Zn homeostasis, GTPase of
COG0523 family [Escherichia coli EC4100B]
gi|417124132|ref|ZP_11972903.1| CobW/P47K family protein [Escherichia coli 97.0246]
gi|417157300|ref|ZP_11994924.1| CobW/P47K family protein [Escherichia coli 96.0497]
gi|417191595|ref|ZP_12013885.1| CobW/P47K family protein [Escherichia coli 4.0522]
gi|417216591|ref|ZP_12023263.1| CobW/P47K family protein [Escherichia coli JB1-95]
gi|417224380|ref|ZP_12027671.1| CobW/P47K family protein [Escherichia coli 96.154]
gi|417269668|ref|ZP_12057028.1| CobW/P47K family protein [Escherichia coli 3.3884]
gi|417584007|ref|ZP_12234801.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
STEC_B2F1]
gi|417589551|ref|ZP_12240272.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
2534-86]
gi|417605311|ref|ZP_12255867.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
STEC_94C]
gi|417605859|ref|ZP_12256393.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
STEC_DG131-3]
gi|417684264|ref|ZP_12333605.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella boydii
3594-74]
gi|419178011|ref|ZP_13721807.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC7B]
gi|419200204|ref|ZP_13743483.1| hypothetical protein ECDEC8A_5292 [Escherichia coli DEC8A]
gi|419206520|ref|ZP_13749662.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC8B]
gi|419224523|ref|ZP_13767425.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC8E]
gi|419230201|ref|ZP_13773022.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC9A]
gi|419235688|ref|ZP_13778444.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC9B]
gi|419240939|ref|ZP_13783635.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC9C]
gi|419246657|ref|ZP_13789280.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC9D]
gi|419252426|ref|ZP_13794980.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC9E]
gi|419281175|ref|ZP_13823408.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC10E]
gi|419281551|ref|ZP_13823776.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC10F]
gi|419378632|ref|ZP_13919637.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC14B]
gi|419383992|ref|ZP_13924921.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC14C]
gi|419389233|ref|ZP_13930084.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC14D]
gi|419863195|ref|ZP_14385745.1| putative GTP-binding protein YjiA [Escherichia coli O103:H25 str.
CVM9340]
gi|419891191|ref|ZP_14411321.1| putative GTP-binding protein YjiA [Escherichia coli O111:H8 str.
CVM9570]
gi|419898017|ref|ZP_14417588.1| putative GTP-binding protein YjiA [Escherichia coli O111:H8 str.
CVM9574]
gi|419922020|ref|ZP_14440052.1| putative GTP-binding protein YjiA [Escherichia coli 541-15]
gi|420087057|ref|ZP_14599028.1| putative GTP-binding protein YjiA [Escherichia coli O111:H8 str.
CVM9602]
gi|420097026|ref|ZP_14608339.1| putative GTP-binding protein YjiA [Escherichia coli O111:H8 str.
CVM9634]
gi|420328686|ref|ZP_14830414.1| hypothetical protein SFCCH060_5057 [Shigella flexneri CCH060]
gi|420356102|ref|ZP_14857145.1| hypothetical protein SB444474_5219 [Shigella boydii 4444-74]
gi|420378327|ref|ZP_14877832.1| hypothetical protein SD22575_0103 [Shigella dysenteriae 225-75]
gi|421680659|ref|ZP_16120502.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
flexneri 1485-80]
gi|423709667|ref|ZP_17684021.1| hypothetical protein ESTG_04103 [Escherichia coli B799]
gi|424774547|ref|ZP_18201557.1| GTP-binding protein YjiA [Escherichia coli O111:H8 str.
CFSAN001632]
gi|432379560|ref|ZP_19622536.1| GTPase [Escherichia coli KTE12]
gi|432752773|ref|ZP_19987345.1| GTPase [Escherichia coli KTE29]
gi|443615899|ref|YP_007379755.1| GTP-binding protein YjiA [Escherichia coli APEC O78]
gi|157069468|gb|ABV08723.1| CobW/P47K family protein [Escherichia coli HS]
gi|257767422|dbj|BAI38917.1| predicted GTPase [Escherichia coli O111:H- str. 11128]
gi|300402812|gb|EFJ86350.1| CobW/P47K family protein [Escherichia coli MS 84-1]
gi|300523705|gb|EFK44774.1| CobW/P47K family protein [Escherichia coli MS 119-7]
gi|300841165|gb|EFK68925.1| CobW/P47K family protein [Escherichia coli MS 124-1]
gi|308120740|gb|EFO58002.1| CobW/P47K family protein [Escherichia coli MS 145-7]
gi|315255804|gb|EFU35772.1| CobW/P47K family protein [Escherichia coli MS 85-1]
gi|320173105|gb|EFW48323.1| putative metal chaperone, involved in Zn homeostasis, GTPase of
COG0523 family [Shigella dysenteriae CDC 74-1112]
gi|320183430|gb|EFW58280.1| Putative metal chaperone, involved in Zn homeostasis, GTPase of
COG0523 family [Shigella flexneri CDC 796-83]
gi|320200542|gb|EFW75128.1| Putative metal chaperone, involved in Zn homeostasis, GTPase of
COG0523 family [Escherichia coli EC4100B]
gi|323176243|gb|EFZ61835.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
OK1180]
gi|332090522|gb|EGI95620.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella boydii
3594-74]
gi|345332238|gb|EGW64696.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
STEC_B2F1]
gi|345345591|gb|EGW77929.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
STEC_94C]
gi|345345909|gb|EGW78245.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
2534-86]
gi|345366713|gb|EGW98802.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
STEC_DG131-3]
gi|378025453|gb|EHV88094.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC7B]
gi|378040418|gb|EHW02883.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC8B]
gi|378040717|gb|EHW03181.1| hypothetical protein ECDEC8A_5292 [Escherichia coli DEC8A]
gi|378059157|gb|EHW21362.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC8E]
gi|378065572|gb|EHW27716.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC9A]
gi|378071158|gb|EHW33229.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC9B]
gi|378077089|gb|EHW39086.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC9C]
gi|378084957|gb|EHW46851.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC9D]
gi|378086594|gb|EHW48468.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC9E]
gi|378122707|gb|EHW84135.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC10E]
gi|378141151|gb|EHX02368.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC10F]
gi|378212042|gb|EHX72368.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC14B]
gi|378222309|gb|EHX82548.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC14C]
gi|378224274|gb|EHX84477.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC14D]
gi|385705778|gb|EIG42842.1| hypothetical protein ESTG_04103 [Escherichia coli B799]
gi|386146412|gb|EIG92859.1| CobW/P47K family protein [Escherichia coli 97.0246]
gi|386166050|gb|EIH32570.1| CobW/P47K family protein [Escherichia coli 96.0497]
gi|386191485|gb|EIH80229.1| CobW/P47K family protein [Escherichia coli 4.0522]
gi|386193453|gb|EIH87737.1| CobW/P47K family protein [Escherichia coli JB1-95]
gi|386199428|gb|EIH98419.1| CobW/P47K family protein [Escherichia coli 96.154]
gi|386228473|gb|EII55829.1| CobW/P47K family protein [Escherichia coli 3.3884]
gi|388343204|gb|EIL09170.1| putative GTP-binding protein YjiA [Escherichia coli O103:H25 str.
CVM9340]
gi|388350934|gb|EIL16237.1| putative GTP-binding protein YjiA [Escherichia coli O111:H8 str.
CVM9570]
gi|388354501|gb|EIL19416.1| putative GTP-binding protein YjiA [Escherichia coli O111:H8 str.
CVM9574]
gi|388396925|gb|EIL57973.1| putative GTP-binding protein YjiA [Escherichia coli 541-15]
gi|391243035|gb|EIQ02332.1| hypothetical protein SFCCH060_5057 [Shigella flexneri CCH060]
gi|391269284|gb|EIQ28195.1| hypothetical protein SB444474_5219 [Shigella boydii 4444-74]
gi|391307916|gb|EIQ65643.1| hypothetical protein SD22575_0103 [Shigella dysenteriae 225-75]
gi|394386189|gb|EJE63700.1| putative GTP-binding protein YjiA [Escherichia coli O111:H8 str.
CVM9634]
gi|394393307|gb|EJE69992.1| putative GTP-binding protein YjiA [Escherichia coli O111:H8 str.
CVM9602]
gi|404342161|gb|EJZ68550.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
flexneri 1485-80]
gi|421933403|gb|EKT91190.1| GTP-binding protein YjiA [Escherichia coli O111:H8 str.
CFSAN001632]
gi|430894765|gb|ELC17050.1| GTPase [Escherichia coli KTE12]
gi|431291720|gb|ELF82219.1| GTPase [Escherichia coli KTE29]
gi|443420407|gb|AGC85311.1| GTP-binding protein YjiA [Escherichia coli APEC O78]
Length = 318
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|422783286|ref|ZP_16836070.1| CobW/HypB/UreG [Escherichia coli TW10509]
gi|323975888|gb|EGB70984.1| CobW/HypB/UreG [Escherichia coli TW10509]
Length = 318
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFITDKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 315
>gi|288958783|ref|YP_003449124.1| cobalamin synthesis protein [Azospirillum sp. B510]
gi|288911091|dbj|BAI72580.1| cobalamin synthesis protein [Azospirillum sp. B510]
Length = 396
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 155/322 (48%), Gaps = 49/322 (15%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQL-AKKKQGQ---FDHIVIETTGLAKPAPVIETFCTDELV 56
++++GCLCCT+RGDLV L L K+ +G+ FD +V+ETTGLA PAP+I T +D L+
Sbjct: 71 LMDSGCLCCTIRGDLVDTLRDLFLKRVKGEIPDFDRVVVETTGLADPAPIIHTLMSDPLL 130
Query: 57 SQYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSL 116
+ +LDGVI VD+ H L+ +P E+V+Q A ADRI+L K D+ T +L
Sbjct: 131 AARFRLDGVIATVDAAHGSLQLDR-QP-----ESVKQAAVADRIVLTKTDVATPAATAAL 184
Query: 117 TERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLE-------RIDSEVHVDNSHCATHHH 169
+R+ IN AP+ A +G VD + G Y+ E R E + H
Sbjct: 185 MQRLATINPAAPILPAAHGEVDPAGLFDAGLYNPETKSPDVVRWLREEAYRDEQAKAHER 244
Query: 170 ESAH------------------------------GHHEGHHHNHMHDSAVSSVTIVSEGT 199
H GH HH + HD + + +V +
Sbjct: 245 HDHHGHDHHDHGHHDHDHGHDHHHEHGDHCGPDCGHDHLHHDANRHDDHIRAFCMVMDRP 304
Query: 200 LDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGV-HSTLDGCPGKAWGPDEK 258
+ + D++E LI + GE+L R+KG+L+V SE V GV H + W D+
Sbjct: 305 VPWNGFVDFMEALIAQAGENLLRVKGLLNVQESELPVVVHGVQHMFHPPVRLEDWPSDDH 364
Query: 259 RINKLVFIGRNLDETALRKGFK 280
R KLVFI R++ + + F
Sbjct: 365 R-TKLVFITRDVGQPVIEPLFN 385
>gi|432944454|ref|ZP_20140918.1| GTPase [Escherichia coli KTE196]
gi|433045907|ref|ZP_20233367.1| GTPase [Escherichia coli KTE117]
gi|431465117|gb|ELH45229.1| GTPase [Escherichia coli KTE196]
gi|431549346|gb|ELI23428.1| GTPase [Escherichia coli KTE117]
Length = 318
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEVE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|395819166|ref|XP_003782970.1| PREDICTED: COBW domain-containing protein 3 isoform 2 [Otolemur
garnettii]
Length = 376
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 150/288 (52%), Gaps = 46/288 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LGNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASIFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA Q+A AD I++NK DLV E +L L I+
Sbjct: 162 LDGIITVVDSKYGLKHLMEEKPDGLINEASRQIALADIILINKTDLVLEEDLNKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + S+ L V H
Sbjct: 222 SINGLGKILETQRSSLQKKLQL-------------VPAIQPHL----------------- 251
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
D ++ ++T G + + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 252 ----DQSIVTITFEVPGNVKEESLNVFIQNLLWEKNVRNKDDHCMEVIRLKGLVSIRDKP 307
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LVFIGRNLD+ L++ F
Sbjct: 308 QQVIVQGVHELYDLEEAP-VSWKDDTERTNRLVFIGRNLDKDILKQLF 354
>gi|419343593|ref|ZP_13884980.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC13A]
gi|419352656|ref|ZP_13893976.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC13B]
gi|419358188|ref|ZP_13899423.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC13C]
gi|419358266|ref|ZP_13899499.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC13D]
gi|419368189|ref|ZP_13909326.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC13E]
gi|378191628|gb|EHX52203.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC13A]
gi|378193820|gb|EHX54345.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC13C]
gi|378194627|gb|EHX55139.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC13B]
gi|378207174|gb|EHX67572.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC13E]
gi|378208873|gb|EHX69249.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC13D]
Length = 318
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|82779605|ref|YP_405954.1| GTP-binding protein YjiA [Shigella dysenteriae Sd197]
gi|81243753|gb|ABB64463.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
Length = 284
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 26 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 85
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 86 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 137
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 138 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 179
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 180 FHFIADKQNDISSIVVDLDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 239
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 240 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 281
>gi|309787435|ref|ZP_07682047.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
dysenteriae 1617]
gi|308925013|gb|EFP70508.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella
dysenteriae 1617]
Length = 318
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVDLDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|218708019|ref|YP_002415538.1| putative GTP-binding protein YjiA [Escherichia coli UMN026]
gi|293403010|ref|ZP_06647107.1| GTP-binding protein YjiA [Escherichia coli FVEC1412]
gi|298378537|ref|ZP_06988421.1| GTP-binding protein YjiA [Escherichia coli FVEC1302]
gi|300899296|ref|ZP_07117562.1| CobW/P47K family protein [Escherichia coli MS 198-1]
gi|301646868|ref|ZP_07246714.1| CobW/P47K family protein [Escherichia coli MS 146-1]
gi|417263563|ref|ZP_12050972.1| CobW/P47K family protein [Escherichia coli 2.3916]
gi|417278927|ref|ZP_12066240.1| CobW/P47K family protein [Escherichia coli 3.2303]
gi|417632408|ref|ZP_12282632.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
STEC_S1191]
gi|418306068|ref|ZP_12917862.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
UMNF18]
gi|419156936|ref|ZP_13701480.1| hypothetical protein ECDEC6C_5176 [Escherichia coli DEC6C]
gi|419162271|ref|ZP_13706755.1| hypothetical protein ECDEC6D_5152 [Escherichia coli DEC6D]
gi|419167180|ref|ZP_13711622.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC6E]
gi|419812556|ref|ZP_14337421.1| putative GTP-binding protein YjiA [Escherichia coli O32:H37 str.
P4]
gi|419935466|ref|ZP_14452547.1| putative GTP-binding protein YjiA [Escherichia coli 576-1]
gi|425117977|ref|ZP_18519740.1| hypothetical protein EC80566_4636 [Escherichia coli 8.0566]
gi|425122690|ref|ZP_18524351.1| hypothetical protein EC80569_4598 [Escherichia coli 8.0569]
gi|425275708|ref|ZP_18667073.1| hypothetical protein ECTW15901_4908 [Escherichia coli TW15901]
gi|425286219|ref|ZP_18677220.1| hypothetical protein ECTW00353_4815 [Escherichia coli TW00353]
gi|432351571|ref|ZP_19594886.1| GTPase [Escherichia coli KTE2]
gi|432400015|ref|ZP_19642777.1| GTPase [Escherichia coli KTE26]
gi|432429044|ref|ZP_19671515.1| GTPase [Escherichia coli KTE181]
gi|432463789|ref|ZP_19705912.1| GTPase [Escherichia coli KTE204]
gi|432478740|ref|ZP_19720720.1| GTPase [Escherichia coli KTE208]
gi|432540759|ref|ZP_19777642.1| GTPase [Escherichia coli KTE235]
gi|432634380|ref|ZP_19870290.1| GTPase [Escherichia coli KTE80]
gi|432643973|ref|ZP_19879789.1| GTPase [Escherichia coli KTE83]
gi|432659210|ref|ZP_19894877.1| GTPase [Escherichia coli KTE111]
gi|432664093|ref|ZP_19899698.1| GTPase [Escherichia coli KTE116]
gi|433055996|ref|ZP_20243130.1| GTPase [Escherichia coli KTE122]
gi|433070791|ref|ZP_20257533.1| GTPase [Escherichia coli KTE128]
gi|433181252|ref|ZP_20365607.1| GTPase [Escherichia coli KTE82]
gi|218435116|emb|CAR16072.1| putative GTPase [Escherichia coli UMN026]
gi|291429925|gb|EFF02939.1| GTP-binding protein YjiA [Escherichia coli FVEC1412]
gi|298280871|gb|EFI22372.1| GTP-binding protein YjiA [Escherichia coli FVEC1302]
gi|300357075|gb|EFJ72945.1| CobW/P47K family protein [Escherichia coli MS 198-1]
gi|301074921|gb|EFK89727.1| CobW/P47K family protein [Escherichia coli MS 146-1]
gi|339418166|gb|AEJ59838.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
UMNF18]
gi|345391926|gb|EGX21712.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
STEC_S1191]
gi|377989389|gb|EHV52556.1| hypothetical protein ECDEC6C_5176 [Escherichia coli DEC6C]
gi|378002418|gb|EHV65470.1| hypothetical protein ECDEC6D_5152 [Escherichia coli DEC6D]
gi|378005480|gb|EHV68484.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC6E]
gi|385154596|gb|EIF16607.1| putative GTP-binding protein YjiA [Escherichia coli O32:H37 str.
P4]
gi|386222926|gb|EII45340.1| CobW/P47K family protein [Escherichia coli 2.3916]
gi|386238344|gb|EII75281.1| CobW/P47K family protein [Escherichia coli 3.2303]
gi|388404528|gb|EIL64987.1| putative GTP-binding protein YjiA [Escherichia coli 576-1]
gi|408188374|gb|EKI14179.1| hypothetical protein ECTW15901_4908 [Escherichia coli TW15901]
gi|408196092|gb|EKI21387.1| hypothetical protein ECTW00353_4815 [Escherichia coli TW00353]
gi|408561847|gb|EKK38037.1| hypothetical protein EC80566_4636 [Escherichia coli 8.0566]
gi|408562678|gb|EKK38831.1| hypothetical protein EC80569_4598 [Escherichia coli 8.0569]
gi|430881560|gb|ELC04778.1| GTPase [Escherichia coli KTE2]
gi|430930714|gb|ELC51210.1| GTPase [Escherichia coli KTE26]
gi|430949231|gb|ELC68681.1| GTPase [Escherichia coli KTE181]
gi|430984061|gb|ELD00710.1| GTPase [Escherichia coli KTE204]
gi|431000675|gb|ELD16735.1| GTPase [Escherichia coli KTE208]
gi|431065453|gb|ELD74217.1| GTPase [Escherichia coli KTE235]
gi|431165630|gb|ELE65963.1| GTPase [Escherichia coli KTE80]
gi|431176455|gb|ELE76420.1| GTPase [Escherichia coli KTE83]
gi|431204472|gb|ELF03034.1| GTPase [Escherichia coli KTE111]
gi|431205835|gb|ELF04276.1| GTPase [Escherichia coli KTE116]
gi|431563323|gb|ELI36540.1| GTPase [Escherichia coli KTE122]
gi|431576868|gb|ELI49530.1| GTPase [Escherichia coli KTE128]
gi|431696135|gb|ELJ61323.1| GTPase [Escherichia coli KTE82]
Length = 318
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEANRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|432856748|ref|ZP_20083999.1| GTPase [Escherichia coli KTE144]
gi|431395256|gb|ELG78768.1| GTPase [Escherichia coli KTE144]
Length = 318
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 315
>gi|432892416|ref|ZP_20104682.1| GTPase [Escherichia coli KTE165]
gi|431427239|gb|ELH09281.1| GTPase [Escherichia coli KTE165]
Length = 318
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENIVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|218703044|ref|YP_002410673.1| putative GTP-binding protein YjiA [Escherichia coli IAI39]
gi|331660980|ref|ZP_08361912.1| putative cobalamin synthesis protein [Escherichia coli TA206]
gi|386627309|ref|YP_006147037.1| putative GTPase [Escherichia coli O7:K1 str. CE10]
gi|416336501|ref|ZP_11673029.1| Putative metal chaperone, involved in Zn homeostasis, GTPase of
COG0523 family [Escherichia coli WV_060327]
gi|422369936|ref|ZP_16450332.1| CobW/P47K family protein [Escherichia coli MS 16-3]
gi|432896519|ref|ZP_20107712.1| GTPase [Escherichia coli KTE192]
gi|433026965|ref|ZP_20214846.1| GTPase [Escherichia coli KTE109]
gi|218373030|emb|CAR20919.1| putative GTPase [Escherichia coli IAI39]
gi|315298307|gb|EFU57562.1| CobW/P47K family protein [Escherichia coli MS 16-3]
gi|320195304|gb|EFW69932.1| Putative metal chaperone, involved in Zn homeostasis, GTPase of
COG0523 family [Escherichia coli WV_060327]
gi|331052022|gb|EGI24061.1| putative cobalamin synthesis protein [Escherichia coli TA206]
gi|349741045|gb|AEQ15751.1| putative GTPase [Escherichia coli O7:K1 str. CE10]
gi|431431396|gb|ELH13172.1| GTPase [Escherichia coli KTE192]
gi|431547147|gb|ELI21528.1| GTPase [Escherichia coli KTE109]
Length = 318
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|170768480|ref|ZP_02902933.1| CobW/P47K family protein [Escherichia albertii TW07627]
gi|170122584|gb|EDS91515.1| CobW/P47K family protein [Escherichia albertii TW07627]
Length = 318
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA AP+ +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPIYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSAKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|416931504|ref|ZP_11933572.1| cobalamin biosynthesis protein, partial [Burkholderia sp. TJI49]
gi|325525685|gb|EGD03445.1| cobalamin biosynthesis protein [Burkholderia sp. TJI49]
Length = 290
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 156/300 (52%), Gaps = 37/300 (12%)
Query: 12 RGDLVKMLLQLA-KKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQYVKLDGVITL 68
RGDL + L LA KK++G+ FD IVIETTGLA P PV +TF D ++ LD VITL
Sbjct: 1 RGDLARALGDLAAKKREGKLDFDRIVIETTGLANPGPVAQTFFIDSEIADDFLLDAVITL 60
Query: 69 VDSKHAMQHLNEVKPRFVVNEAVE-QVAYADRIILNKIDLVTETELGSLTERIKHINAMA 127
VD+KHA L+E +E V+ QV +ADR+ + K DLV + + L R+ H+N A
Sbjct: 61 VDAKHANAQLDE-------HEVVQRQVGFADRLFITKSDLVDDQTVAGLKHRLMHMNPKA 113
Query: 128 PVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHHNHMHDS 187
+KL +G D+ + + G++L ++++ +D A H H H+ H + D
Sbjct: 114 TIKLVNFGEADIKEIFDLRGFNL---NAKLEIDPDFLAEDDHAHHHHDHDHDHDHADCDH 170
Query: 188 A-----------------------VSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMK 224
+ S ++ D ++++D+L +++ GE + R K
Sbjct: 171 DHGQCAHDHGHGHHNHHHAHHDDKIKSFVYRNDRPFDPNKLEDFLGGILQIYGERMLRYK 230
Query: 225 GILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
G+L + G +++ VFQGVH + W P EK+ NK+VFIG +L + + G CLA
Sbjct: 231 GVLYMKGVDRKVVFQGVHQMMGSDLAAKWLPAEKKTNKMVFIGVDLPQDLITDGLDACLA 290
>gi|429058735|ref|ZP_19122944.1| hypothetical protein EC971742_5173 [Escherichia coli 97.1742]
gi|427306352|gb|EKW68883.1| hypothetical protein EC971742_5173 [Escherichia coli 97.1742]
Length = 318
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSIKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 315
>gi|331671464|ref|ZP_08372262.1| putative cobalamin synthesis protein [Escherichia coli TA280]
gi|331071309|gb|EGI42666.1| putative cobalamin synthesis protein [Escherichia coli TA280]
Length = 318
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLVLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|331680451|ref|ZP_08381110.1| putative cobalamin synthesis protein [Escherichia coli H591]
gi|331071914|gb|EGI43250.1| putative cobalamin synthesis protein [Escherichia coli H591]
Length = 318
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTFTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|417287870|ref|ZP_12075156.1| CobW/P47K family protein [Escherichia coli TW07793]
gi|386248655|gb|EII94827.1| CobW/P47K family protein [Escherichia coli TW07793]
Length = 318
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLTRINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENIVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIAGKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|417692881|ref|ZP_12342072.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella boydii
5216-82]
gi|332083329|gb|EGI88560.1| cobW/HypB/UreG, nucleotide-binding domain protein [Shigella boydii
5216-82]
Length = 318
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVRTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 315
>gi|332249499|ref|XP_003273895.1| PREDICTED: COBW domain-containing protein 5-like isoform 2
[Nomascus leucogenys]
Length = 376
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 149/288 (51%), Gaps = 46/288 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWIDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + S+ H
Sbjct: 222 SINGLGQILETQRSSLQKKL---------------------------------QHVPGTQ 248
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
H+ D ++ ++T G ++++ +++ L+ EK ++ R+KG++S+
Sbjct: 249 PHL-DQSIVTITFEVPGNAKEEQLNIFIQNLLWEKNVRNKDSHCMEVIRLKGLVSIKDKS 307
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 308 QQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLIGRNLDKDILKQLF 354
>gi|255291940|dbj|BAH90428.1| cobalamin (vitamin B12) biosynthesis protein P47K [uncultured
bacterium]
Length = 328
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 147/275 (53%), Gaps = 32/275 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CC++R DL L +LA +K+ F+ +VIETTGLA P PV +TF D+ +++
Sbjct: 61 MSNGCICCSIREDLRSTLSELAARKRSGELDFERVVIETTGLADPGPVAQTFFMDDEIAE 120
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LD ++TLVD+KHA Q LN+ EA QV +AD+I ++K DLV+ EL +L
Sbjct: 121 SYLLDAIVTLVDAKHAAQQLNDRV------EAQRQVGFADQIFISKSDLVSAEELDALQH 174
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHE-------- 170
R+KH+N AP ++ +G V + V + G++L +S++ +D
Sbjct: 175 RLKHMNPRAPQQVVHFGEVPIKQVFDLRGFNL---NSKLDIDPDFLKEEDGHDHDHDHHH 231
Query: 171 ------------SAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGE 218
+H H H H+H HD V S S+ D ++D+L ++ G
Sbjct: 232 DHDHEHGEHCDHPSHQHAHAHGHHHHHDDDVKSFVFRSDRVFDPARLEDFLGAIVNIYGP 291
Query: 219 DLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAW 253
+ R KG+L + G+E++ +FQGVH + G W
Sbjct: 292 RMLRYKGVLWMKGTERKVIFQGVHQLMGSDLGPEW 326
>gi|188026300|ref|ZP_02961613.2| hypothetical protein PROSTU_03655 [Providencia stuartii ATCC 25827]
gi|188022408|gb|EDU60448.1| CobW/P47K family protein [Providencia stuartii ATCC 25827]
Length = 328
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 149/281 (53%), Gaps = 29/281 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CC+ +L LL L FD +VIE TG+A P P+ +TF + E++ +
Sbjct: 64 LSNGCICCSRSNELENALLDLLDGLDSGKLDFDRLVIECTGMADPGPITQTFFSHEVLCE 123
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA + L++ F + +A Q+ YADRI+L K D+ E E SL E
Sbjct: 124 RYLLDGIITLVDAVHANKQLDD----FAIAQA--QIGYADRILLTKTDVQPEHE--SLIE 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ INA AP+ +G +D+D + + G+ L DS++ V+
Sbjct: 176 RLQRINARAPIYPVTHGEIDLDLLFNIQGFLL---DSQLKVNQPTF----------RFTP 222
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HN V+S+ + + ++L V D +E L+ ++L R KGILS+ ++ +F
Sbjct: 223 KQHNE-----VNSIVVEFDYPVELMAVSDVMESLLLGFADNLLRYKGILSIKNEPKRLLF 277
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W +E R + LVFIG NL E +R+ F
Sbjct: 278 QGVQRLYSADWDSDWAENEPRHSVLVFIGINLPENEIRQKF 318
>gi|110644787|ref|YP_672517.1| GTP-binding protein YjiA [Escherichia coli 536]
gi|191170805|ref|ZP_03032357.1| CobW/P47K family protein [Escherichia coli F11]
gi|218692735|ref|YP_002400947.1| putative GTP-binding protein YjiA [Escherichia coli ED1a]
gi|222159087|ref|YP_002559226.1| GTP-binding protein yjiA [Escherichia coli LF82]
gi|300992651|ref|ZP_07179965.1| CobW/P47K family protein [Escherichia coli MS 200-1]
gi|387619717|ref|YP_006122739.1| putative GTP-binding protein YjiA [Escherichia coli O83:H1 str. NRG
857C]
gi|419703216|ref|ZP_14230794.1| putative GTP-binding protein YjiA [Escherichia coli SCI-07]
gi|422374630|ref|ZP_16454905.1| CobW/P47K family protein [Escherichia coli MS 60-1]
gi|422383720|ref|ZP_16463865.1| CobW/P47K family protein [Escherichia coli MS 57-2]
gi|432469223|ref|ZP_19711281.1| GTPase [Escherichia coli KTE206]
gi|432716324|ref|ZP_19951341.1| GTPase [Escherichia coli KTE8]
gi|432730667|ref|ZP_19965529.1| GTPase [Escherichia coli KTE45]
gi|432762217|ref|ZP_19996683.1| GTPase [Escherichia coli KTE46]
gi|433080703|ref|ZP_20267202.1| GTPase [Escherichia coli KTE131]
gi|110346379|gb|ABG72616.1| putative cobalamin synthesis protein [Escherichia coli 536]
gi|190909029|gb|EDV68616.1| CobW/P47K family protein [Escherichia coli F11]
gi|218430299|emb|CAR11169.1| putative GTPase [Escherichia coli ED1a]
gi|222036092|emb|CAP78837.1| Uncharacterized GTP-binding protein yjiA [Escherichia coli LF82]
gi|300305272|gb|EFJ59792.1| CobW/P47K family protein [Escherichia coli MS 200-1]
gi|312948978|gb|ADR29805.1| putative GTP-binding protein YjiA [Escherichia coli O83:H1 str. NRG
857C]
gi|324005098|gb|EGB74317.1| CobW/P47K family protein [Escherichia coli MS 57-2]
gi|324014072|gb|EGB83291.1| CobW/P47K family protein [Escherichia coli MS 60-1]
gi|380345655|gb|EIA33965.1| putative GTP-binding protein YjiA [Escherichia coli SCI-07]
gi|431001755|gb|ELD17329.1| GTPase [Escherichia coli KTE206]
gi|431249222|gb|ELF43388.1| GTPase [Escherichia coli KTE8]
gi|431279182|gb|ELF70151.1| GTPase [Escherichia coli KTE45]
gi|431303664|gb|ELF92208.1| GTPase [Escherichia coli KTE46]
gi|431590805|gb|ELI61811.1| GTPase [Escherichia coli KTE131]
Length = 318
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 143/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGYIQFDRLVIECTGMADPGPIIQTFFSHEVLCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + ++ QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTIAQS--QVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 315
>gi|332186596|ref|ZP_08388339.1| cobalamin synthesis cobW C-terminal domain protein [Sphingomonas
sp. S17]
gi|332013248|gb|EGI55310.1| cobalamin synthesis cobW C-terminal domain protein [Sphingomonas
sp. S17]
Length = 365
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 139/276 (50%), Gaps = 14/276 (5%)
Query: 5 GCLCCTVRGDLVKML----LQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
GCLCCT+RGDL + L + A+ + FD +VIETTGLA PAP++ T TD +++
Sbjct: 72 GCLCCTIRGDLARTLRDAPWRFARDGECWFDRVVIETTGLADPAPILHTLMTDPQLARLY 131
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
+LD VI VD+ M L + +P EAV+Q A ADR++L K DL E ++ R+
Sbjct: 132 RLDAVIATVDAAAGMATL-DAQP-----EAVKQAAVADRLLLTKTDLAEEATQAAIRTRL 185
Query: 121 KHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
+N AP+ G VD + VG +D +V N A + + H HH H
Sbjct: 186 AALNPGAPIVPVSNGVVDPALLFDVGLWDPASKSDDV---NRWLADEAYHAGHHHHHHHD 242
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQG 240
N HD + + + + LD D WL L KG DL R+KGI++++G + V G
Sbjct: 243 VNR-HDKDIQATCLTFDTPLDPVAFDRWLGLLTMFKGADLLRVKGIINIAGHDAPVVVHG 301
Query: 241 VHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
V P + R +++FI R +D LR
Sbjct: 302 VQHVFHPPIELERWPSQDRRTRMIFITRGIDPEELR 337
>gi|433196514|ref|ZP_20380455.1| GTPase [Escherichia coli KTE94]
gi|431727079|gb|ELJ90842.1| GTPase [Escherichia coli KTE94]
Length = 318
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 143/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGYIQFDRLVIECTGMADPGPIIQTFFSHEVLCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + ++ QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTIAQS--QVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|340001837|ref|YP_004732721.1| hypothetical protein SBG_3941 [Salmonella bongori NCTC 12419]
gi|339515199|emb|CCC32983.1| conserved hypothetical protein [Salmonella bongori NCTC 12419]
Length = 318
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 143/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CCT +L LL L K FD +VIE TG+A P P+I+TF + +++ Q
Sbjct: 60 LTNGCICCTRSNELEDALLDLLDNLDKGNISFDRLVIECTGMADPGPIIQTFFSHDVICQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + ++ QV YADRI+L K D+ E+E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTIAQS--QVGYADRILLTKTDVAGESE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLALLFDTNGFMLE------------------ENVVSAKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + LVFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTLVFIGIQLPEDEIRAAFAG 315
>gi|386742443|ref|YP_006215622.1| putative GTP-binding protein YjiA [Providencia stuartii MRSN 2154]
gi|384479136|gb|AFH92931.1| putative GTP-binding protein YjiA [Providencia stuartii MRSN 2154]
Length = 324
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 149/281 (53%), Gaps = 29/281 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CC+ +L LL L FD +VIE TG+A P P+ +TF + E++ +
Sbjct: 60 LSNGCICCSRSNELENALLDLLDGLDSGKLDFDRLVIECTGMADPGPITQTFFSHEVLCE 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA + L++ F + +A Q+ YADRI+L K D+ E E SL E
Sbjct: 120 RYLLDGIITLVDAVHANKQLDD----FAIAQA--QIGYADRILLTKTDVQPEHE--SLIE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ INA AP+ +G +D+D + + G+ L DS++ V+
Sbjct: 172 RLQRINARAPIYPVTHGEIDLDLLFNIQGFLL---DSQLKVNQPTF----------RFTP 218
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
HN V+S+ + + ++L V D +E L+ ++L R KGILS+ ++ +F
Sbjct: 219 KQHNE-----VNSIVVEFDYPVELMAVSDVMESLLLGFADNLLRYKGILSIKNEPKRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV W +E R + LVFIG NL E +R+ F
Sbjct: 274 QGVQRLYSADWDSDWAENEPRHSVLVFIGINLPENEIRQKF 314
>gi|42021|emb|CAA38118.1| unnamed protein product [Escherichia coli]
Length = 280
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 22 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQ 81
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 82 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLHE 133
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 134 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 175
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 176 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 235
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 236 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 277
>gi|537194|gb|AAA97249.1| yjiA [Escherichia coli str. K-12 substr. MG1655]
Length = 284
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 26 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQ 85
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 86 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLHE 137
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 138 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 179
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 180 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 239
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 240 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 281
>gi|90111738|ref|NP_418772.4| predicted GTPase [Escherichia coli str. K-12 substr. MG1655]
gi|218698190|ref|YP_002405857.1| GTP-binding protein YjiA [Escherichia coli 55989]
gi|238903440|ref|YP_002929236.1| putative GTP-binding protein YjiA [Escherichia coli BW2952]
gi|331650833|ref|ZP_08351861.1| putative cobalamin synthesis protein [Escherichia coli M718]
gi|386597147|ref|YP_006093547.1| cobalamin synthesis protein P47K [Escherichia coli DH1]
gi|387623982|ref|YP_006131610.1| putative GTP-binding protein YjiA [Escherichia coli DH1]
gi|388480288|ref|YP_492483.1| GTPase [Escherichia coli str. K-12 substr. W3110]
gi|407467412|ref|YP_006786146.1| GTP-binding protein YjiA [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407483871|ref|YP_006781020.1| putative GTP-binding protein YjiA [Escherichia coli O104:H4 str.
2011C-3493]
gi|410484411|ref|YP_006771957.1| GTP-binding protein YjiA [Escherichia coli O104:H4 str.
2009EL-2050]
gi|417808160|ref|ZP_12455073.1| putative GTP-binding protein YjiA [Escherichia coli O104:H4 str.
LB226692]
gi|417835809|ref|ZP_12482239.1| putative GTP-binding protein YjiA [Escherichia coli O104:H4 str.
01-09591]
gi|417864523|ref|ZP_12509569.1| hypothetical protein C22711_1456 [Escherichia coli O104:H4 str.
C227-11]
gi|417945375|ref|ZP_12588609.1| putative GTP-binding protein YjiA [Escherichia coli XH140A]
gi|417977376|ref|ZP_12618161.1| putative GTP-binding protein YjiA [Escherichia coli XH001]
gi|418959396|ref|ZP_13511294.1| putative cobalamin synthesis protein [Escherichia coli J53]
gi|422990662|ref|ZP_16981433.1| hypothetical protein EUAG_00255 [Escherichia coli O104:H4 str.
C227-11]
gi|422992602|ref|ZP_16983366.1| hypothetical protein EUBG_00253 [Escherichia coli O104:H4 str.
C236-11]
gi|422997811|ref|ZP_16988567.1| hypothetical protein EUEG_00239 [Escherichia coli O104:H4 str.
09-7901]
gi|423006294|ref|ZP_16997038.1| hypothetical protein EUDG_04714 [Escherichia coli O104:H4 str.
04-8351]
gi|423007917|ref|ZP_16998655.1| hypothetical protein EUFG_00254 [Escherichia coli O104:H4 str.
11-3677]
gi|423022103|ref|ZP_17012806.1| hypothetical protein EUHG_00256 [Escherichia coli O104:H4 str.
11-4404]
gi|423027258|ref|ZP_17017951.1| hypothetical protein EUIG_00262 [Escherichia coli O104:H4 str.
11-4522]
gi|423033095|ref|ZP_17023779.1| hypothetical protein EUJG_02154 [Escherichia coli O104:H4 str.
11-4623]
gi|423035961|ref|ZP_17026635.1| hypothetical protein EUKG_00238 [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423041081|ref|ZP_17031748.1| hypothetical protein EULG_00256 [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423047767|ref|ZP_17038424.1| hypothetical protein EUMG_00255 [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423056305|ref|ZP_17045110.1| hypothetical protein EUNG_04708 [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423058316|ref|ZP_17047112.1| hypothetical protein EUOG_00256 [Escherichia coli O104:H4 str.
11-4632 C5]
gi|429722158|ref|ZP_19257059.1| GTPase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429774237|ref|ZP_19306242.1| GTPase [Escherichia coli O104:H4 str. 11-02030]
gi|429779498|ref|ZP_19311454.1| GTPase [Escherichia coli O104:H4 str. 11-02033-1]
gi|429783553|ref|ZP_19315467.1| GTPase [Escherichia coli O104:H4 str. 11-02092]
gi|429788891|ref|ZP_19320767.1| GTPase [Escherichia coli O104:H4 str. 11-02093]
gi|429795121|ref|ZP_19326948.1| GTPase [Escherichia coli O104:H4 str. 11-02281]
gi|429801047|ref|ZP_19332826.1| GTPase [Escherichia coli O104:H4 str. 11-02318]
gi|429804679|ref|ZP_19336427.1| GTPase [Escherichia coli O104:H4 str. 11-02913]
gi|429809489|ref|ZP_19341193.1| GTPase [Escherichia coli O104:H4 str. 11-03439]
gi|429815250|ref|ZP_19346910.1| GTPase [Escherichia coli O104:H4 str. 11-04080]
gi|429820461|ref|ZP_19352076.1| GTPase [Escherichia coli O104:H4 str. 11-03943]
gi|429906510|ref|ZP_19372480.1| GTPase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429910707|ref|ZP_19376664.1| GTPase [Escherichia coli O104:H4 str. Ec11-9941]
gi|429916547|ref|ZP_19382488.1| GTPase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429921585|ref|ZP_19387507.1| GTPase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429927402|ref|ZP_19393309.1| GTPase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429931335|ref|ZP_19397231.1| GTPase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429937878|ref|ZP_19403759.1| GTPase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429938593|ref|ZP_19404467.1| GTPase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429946234|ref|ZP_19412090.1| GTPase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429948880|ref|ZP_19414728.1| GTPase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429957147|ref|ZP_19422976.1| GTPase [Escherichia coli O104:H4 str. Ec12-0466]
gi|432492192|ref|ZP_19734043.1| GTPase [Escherichia coli KTE213]
gi|432837453|ref|ZP_20070951.1| GTPase [Escherichia coli KTE140]
gi|433206122|ref|ZP_20389846.1| GTPase [Escherichia coli KTE95]
gi|13432256|sp|P24203.3|YJIA_ECOLI RecName: Full=Uncharacterized GTP-binding protein YjiA
gi|33357464|pdb|1NIJ|A Chain A, Yjia Protein
gi|453056238|pdb|4IXM|A Chain A, Crystal Structure Of Zn(ii)-bound Yjia Gtpase From E. Coli
gi|453056239|pdb|4IXM|B Chain B, Crystal Structure Of Zn(ii)-bound Yjia Gtpase From E. Coli
gi|85677092|dbj|BAE78342.1| predicted GTPase [Escherichia coli str. K12 substr. W3110]
gi|87082430|gb|AAC77308.2| putative GTPase [Escherichia coli str. K-12 substr. MG1655]
gi|218354922|emb|CAV02133.1| putative GTPase [Escherichia coli 55989]
gi|238862449|gb|ACR64447.1| predicted GTPase [Escherichia coli BW2952]
gi|260450836|gb|ACX41258.1| cobalamin synthesis protein P47K [Escherichia coli DH1]
gi|315138906|dbj|BAJ46065.1| putative GTP-binding protein YjiA [Escherichia coli DH1]
gi|331051287|gb|EGI23336.1| putative cobalamin synthesis protein [Escherichia coli M718]
gi|340731515|gb|EGR60663.1| putative GTP-binding protein YjiA [Escherichia coli O104:H4 str.
01-09591]
gi|340737270|gb|EGR71538.1| putative GTP-binding protein YjiA [Escherichia coli O104:H4 str.
LB226692]
gi|341917812|gb|EGT67427.1| hypothetical protein C22711_1456 [Escherichia coli O104:H4 str.
C227-11]
gi|342362956|gb|EGU27069.1| putative GTP-binding protein YjiA [Escherichia coli XH140A]
gi|344192986|gb|EGV47071.1| putative GTP-binding protein YjiA [Escherichia coli XH001]
gi|354859160|gb|EHF19608.1| hypothetical protein EUDG_04714 [Escherichia coli O104:H4 str.
04-8351]
gi|354859648|gb|EHF20095.1| hypothetical protein EUAG_00255 [Escherichia coli O104:H4 str.
C227-11]
gi|354866345|gb|EHF26768.1| hypothetical protein EUBG_00253 [Escherichia coli O104:H4 str.
C236-11]
gi|354876679|gb|EHF37039.1| hypothetical protein EUEG_00239 [Escherichia coli O104:H4 str.
09-7901]
gi|354881688|gb|EHF42016.1| hypothetical protein EUHG_00256 [Escherichia coli O104:H4 str.
11-4404]
gi|354884786|gb|EHF45097.1| hypothetical protein EUFG_00254 [Escherichia coli O104:H4 str.
11-3677]
gi|354886233|gb|EHF46520.1| hypothetical protein EUIG_00262 [Escherichia coli O104:H4 str.
11-4522]
gi|354889749|gb|EHF49996.1| hypothetical protein EUJG_02154 [Escherichia coli O104:H4 str.
11-4623]
gi|354901949|gb|EHF62071.1| hypothetical protein EUKG_00238 [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354905275|gb|EHF65358.1| hypothetical protein EULG_00256 [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354907782|gb|EHF67838.1| hypothetical protein EUMG_00255 [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354910532|gb|EHF70555.1| hypothetical protein EUNG_04708 [Escherichia coli O104:H4 str.
11-4632 C4]
gi|354918254|gb|EHF78210.1| hypothetical protein EUOG_00256 [Escherichia coli O104:H4 str.
11-4632 C5]
gi|384377617|gb|EIE35510.1| putative cobalamin synthesis protein [Escherichia coli J53]
gi|406779573|gb|AFS58997.1| putative GTP-binding protein YjiA [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407056168|gb|AFS76219.1| putative GTP-binding protein YjiA [Escherichia coli O104:H4 str.
2011C-3493]
gi|407063447|gb|AFS84494.1| putative GTP-binding protein YjiA [Escherichia coli O104:H4 str.
2009EL-2071]
gi|429352628|gb|EKY89340.1| GTPase [Escherichia coli O104:H4 str. 11-02030]
gi|429353344|gb|EKY90052.1| GTPase [Escherichia coli O104:H4 str. 11-02033-1]
gi|429353842|gb|EKY90547.1| GTPase [Escherichia coli O104:H4 str. 11-02092]
gi|429367332|gb|EKZ03926.1| GTPase [Escherichia coli O104:H4 str. 11-02093]
gi|429368484|gb|EKZ05070.1| GTPase [Escherichia coli O104:H4 str. 11-02281]
gi|429370710|gb|EKZ07273.1| GTPase [Escherichia coli O104:H4 str. 11-02318]
gi|429383084|gb|EKZ19545.1| GTPase [Escherichia coli O104:H4 str. 11-02913]
gi|429386649|gb|EKZ23096.1| GTPase [Escherichia coli O104:H4 str. 11-03439]
gi|429386846|gb|EKZ23291.1| GTPase [Escherichia coli O104:H4 str. 11-03943]
gi|429398106|gb|EKZ34449.1| GTPase [Escherichia coli O104:H4 str. 11-04080]
gi|429400154|gb|EKZ36471.1| GTPase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429400841|gb|EKZ37154.1| GTPase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429411247|gb|EKZ47457.1| GTPase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429412819|gb|EKZ49009.1| GTPase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429419871|gb|EKZ56005.1| GTPase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429423733|gb|EKZ59840.1| GTPase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429429890|gb|EKZ65957.1| GTPase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429435832|gb|EKZ71849.1| GTPase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429443014|gb|EKZ78967.1| GTPase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429445438|gb|EKZ81379.1| GTPase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429451905|gb|EKZ87792.1| GTPase [Escherichia coli O104:H4 str. Ec12-0466]
gi|429457100|gb|EKZ92942.1| GTPase [Escherichia coli O104:H4 str. Ec11-9941]
gi|431015207|gb|ELD28764.1| GTPase [Escherichia coli KTE213]
gi|431393266|gb|ELG76831.1| GTPase [Escherichia coli KTE140]
gi|431713728|gb|ELJ77938.1| GTPase [Escherichia coli KTE95]
Length = 318
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLHE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 315
>gi|297600051|ref|NP_001048412.2| Os02g0800000 [Oryza sativa Japonica Group]
gi|255671318|dbj|BAF10326.2| Os02g0800000, partial [Oryza sativa Japonica Group]
Length = 176
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/183 (46%), Positives = 110/183 (60%), Gaps = 36/183 (19%)
Query: 126 MAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHHNHMH 185
MA +K A+YG VD+D+VLG+GG+DLERI+S V E +H HH GH H H H
Sbjct: 2 MAHLKRAEYGKVDLDYVLGIGGFDLERIESAVT-----------EVSHDHHTGHEHKHDH 50
Query: 186 D-------------------------SAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDL 220
+ VSSV+IV EG +DL++ D WL L+ E+ +D+
Sbjct: 51 EHHHHDHHHHDHEHKHDHHAHDHTHDPGVSSVSIVCEGEMDLEKADMWLGNLLLERSDDI 110
Query: 221 YRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
YRMKG+LSVSG Q++VFQGVH G P + W P+E RINK+VFIG+NL+ L KGFK
Sbjct: 111 YRMKGLLSVSGMPQRFVFQGVHDIFQGSPERMWEPNEPRINKIVFIGKNLNGEELEKGFK 170
Query: 281 GCL 283
CL
Sbjct: 171 DCL 173
>gi|182413542|ref|YP_001818608.1| cobalamin synthesis protein P47K [Opitutus terrae PB90-1]
gi|177840756|gb|ACB75008.1| cobalamin synthesis protein P47K [Opitutus terrae PB90-1]
Length = 493
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 107/151 (70%), Gaps = 7/151 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGCLCCTVRGDL+++L +L K+K Q D I+IETTG+A PAPV +TF TD+ + Q +
Sbjct: 59 MNNGCLCCTVRGDLIRILGRLMKRKD-QLDGILIETTGMANPAPVAQTFFTDDEMRQAFR 117
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LD ++T+VD+KH +QHL+ +EA +QVA+AD I+LNK DLV EL +L +RI
Sbjct: 118 LDAIVTVVDAKHVVQHLD------TEDEAKKQVAFADVILLNKTDLVMPAELDALEKRIH 171
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER 152
INA+A + + + + VL VGG++LER
Sbjct: 172 RINAVAKIHRTQNCDLPLTRVLNVGGFNLER 202
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+H H H+ AV+SV I ++G LD ++DW+ L+ KG D+YRMKG+L+V G+ ++ VF
Sbjct: 389 YHAQHSHNDAVASVGITADGELDGKRLNDWISTLLRVKGGDIYRMKGVLAVKGANKRLVF 448
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QGVH D + W D R NKL+FIG+NLD AL + FK CLA
Sbjct: 449 QGVHMLFDAKFDREWDGD-ARQNKLIFIGKNLDRAALTEAFKSCLA 493
>gi|298290222|ref|YP_003692161.1| cobalamin synthesis protein P47K [Starkeya novella DSM 506]
gi|296926733|gb|ADH87542.1| cobalamin synthesis protein P47K [Starkeya novella DSM 506]
Length = 335
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 142/284 (50%), Gaps = 18/284 (6%)
Query: 1 MVNNGCLCCTVRGDLVKMLLQL-AKKKQGQ---FDHIVIETTGLAKPAPVIETFCTDELV 56
++ +GC+CCTVRGDLV L L AK +G+ F I IETTGLA PA ++ TF T+ L+
Sbjct: 58 VLQSGCICCTVRGDLVDTLDDLCAKVARGELPPFSRIAIETTGLADPASLVRTFLTERLL 117
Query: 57 SQYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSL 116
+ L V+T VD+ + L+E + EA Q A AD I+L K DL + + SL
Sbjct: 118 ADRFTLRAVVTTVDAVNGAVQLDEFE------EARHQAALADVIVLTKSDLASPEAVASL 171
Query: 117 TERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHH 176
T R+K N A + +G++ D + + R D EV + A
Sbjct: 172 TARLKEANPSAAIVPVVHGAIAPDTLFALVPAHPSRADDEV-------LAWLNSEAFEET 224
Query: 177 EGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQY 236
+GH H+H HDS++ + + + + + WL ++ +G DL RMKGI+++ G
Sbjct: 225 DGHAHSH-HDSSIKPFAVTLDRPVTREALRSWLRSILSLRGADLLRMKGIVALKGEAAPI 283
Query: 237 VFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
V V + L A P + ++VFI R++ ALR +
Sbjct: 284 VVHAVQNALYPPVQLAAWPSDDHTTRIVFITRDIAPEALRNSLE 327
>gi|296189698|ref|XP_002742881.1| PREDICTED: COBW domain-containing protein 3-like isoform 3
[Callithrix jacchus]
Length = 376
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 154/289 (53%), Gaps = 48/289 (16%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + +K + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLKAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERID-SEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + S++ + +R+ +E H+ S
Sbjct: 222 SINGLGQILETQKSSLETEA---------QRVPGTEPHISPS------------------ 254
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
+ +VT G ++++ +++ L+ EK ++ R+KG++S+
Sbjct: 255 --------IVTVTFEVPGNAKEEQLNVFIQNLLWEKTVKNKDNHCMEVIRLKGLVSIKDK 306
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 307 PQQVIVQGVHELYDLEETP-VSWKGDTERTNRLVLIGRNLDKDILKQLF 354
>gi|417626656|ref|ZP_12276937.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
STEC_H.1.8]
gi|345369163|gb|EGX01151.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
STEC_H.1.8]
Length = 318
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P+P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPSPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DE + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DETPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|384485764|gb|EIE77944.1| hypothetical protein RO3G_02648 [Rhizopus delemar RA 99-880]
Length = 271
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 155/277 (55%), Gaps = 32/277 (11%)
Query: 25 KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLDGVITLVDSKHAMQHLNEVKPR 84
+K+G+FD+I++ET+GLA P P+ F D+ + + LDG++TLVD+KH +LNE K
Sbjct: 2 EKRGKFDYILLETSGLADPGPIASMFWLDDGLGSEIYLDGIVTLVDAKHIKDYLNEEKKD 61
Query: 85 FVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIKHINAMAPVKLAKYGSVDMDFVLG 144
++NEA++QVA ADRI++NK DL+T+ EL L + IN++A + + + + +D+VL
Sbjct: 62 MMMNEALKQVAIADRIVINKKDLITDAELEQLQSDLGSINSVADMIVTERSKIPLDYVLD 121
Query: 145 VGGYDLERIDSEVHVDNS---HCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLD 201
+ YD+ +D+ +H H TH HE +H V +V I + L+
Sbjct: 122 IKAYDVNNVDALIHQTKKIEDHINTHAHEISH--------------EVQTVCIQFDQQLE 167
Query: 202 -LDEVDDWLERLIEEKGED--------LYRMKGIL------SVSGSEQQYVFQGVHSTLD 246
+++++ W++ L+ EK + R+KGI+ ++S ++++ V QGV D
Sbjct: 168 TIEQLEYWIQDLLWEKQIQGVEADPVTVLRLKGIIYPPKDKNLSNAKKRLVIQGVQDLYD 227
Query: 247 GCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
G + + ++K+V IG++L + L F+ L
Sbjct: 228 IQEGYSEEDESNVLSKIVLIGKDLQKDKLSASFRDIL 264
>gi|344297695|ref|XP_003420532.1| PREDICTED: COBW domain-containing protein 2 isoform 3 [Loxodonta
africana]
Length = 376
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 46/288 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LGNGCLCCSVKDSGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG++T+VDSK+ ++HL E K ++NEA QVA AD II+NK DLV E +L L I+
Sbjct: 162 LDGIVTVVDSKYGLKHLAEDKADGLINEATRQVALADLIIINKTDLVPEEDLSQLRMTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + S+ H SA H
Sbjct: 222 SINGLGKILETQRSSLQKKL--------------------------QHVSATQPH----- 250
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
D + +VT G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 251 ---LDQNIITVTFEVPGNAKEESLNVFIQNLLWEKNVRNKDGHCMEVVRLKGLVSIRDRA 307
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LVFIG+NLD+ LR+ F
Sbjct: 308 QQVIVQGVHELYDLEETP-VSWDDDTQRTNRLVFIGKNLDKDILRQLF 354
>gi|395229292|ref|ZP_10407608.1| p47k family protein [Citrobacter sp. A1]
gi|424729391|ref|ZP_18157993.1| p47k family protein [Citrobacter sp. L17]
gi|394717345|gb|EJF23043.1| p47k family protein [Citrobacter sp. A1]
gi|422896115|gb|EKU35901.1| p47k family protein [Citrobacter sp. L17]
Length = 318
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 145/283 (51%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CCT +L LL L K FD +VIE TG+A P P+I+TF + E++ +
Sbjct: 60 LTNGCICCTRSSELEDALLDLLDNLDKGTINFDRLVIECTGMADPGPIIQTFFSHEVICE 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + ++ QV YADRI+L K D+ E+E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTIAQS--QVGYADRILLTKTDVAGESE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA AP+ +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPIYTVTHGDIDLAQLFDTNGFMLE------------------ENVVSAKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +++ +V +E L+ E E L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVNISDVSRVMENLLLESAEKLLRYKGMLWIEGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DE+ ++LVFIG NL E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEQPYSQLVFIGINLPEDEIRAAFAG 315
>gi|410978063|ref|XP_003995416.1| PREDICTED: COBW domain-containing protein 2 isoform 2 [Felis catus]
Length = 376
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 151/288 (52%), Gaps = 46/288 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGVDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD II+NK DL++E +L L I+
Sbjct: 162 LDGIITVVDSKYGLKHLEEEKPDGLINEASRQVALADIIIINKTDLISEEDLKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + LE S + H T
Sbjct: 222 SINGLGKI--------------------LETQRSSLQKKLQHVPTTQP------------ 249
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
H+ D +V +VT G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 250 -HL-DQSVLTVTFEVPGNAKEESLNVFIQNLLWEKNVRNKDGDCMEVIRLKGLVSIKDKL 307
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
+Q + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 308 KQVIVQGVHELYDLEETP-LSWKDDTERTNRLVLIGRNLDKEILKQLF 354
>gi|433132951|ref|ZP_20318359.1| GTPase [Escherichia coli KTE163]
gi|431640052|gb|ELJ07816.1| GTPase [Escherichia coli KTE163]
Length = 318
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ +A + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVYADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 315
>gi|417231028|ref|ZP_12032444.1| CobW/P47K family protein [Escherichia coli 5.0959]
gi|386205609|gb|EII10119.1| CobW/P47K family protein [Escherichia coli 5.0959]
Length = 318
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 141/283 (49%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMAAPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DE + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DETPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|290476599|ref|YP_003469504.1| cobalamin synthesis protein [Xenorhabdus bovienii SS-2004]
gi|289175937|emb|CBJ82740.1| cobalamin synthesis protein [Xenorhabdus bovienii SS-2004]
Length = 317
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 150/281 (53%), Gaps = 29/281 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CC+ +L LL L K Q FD ++IE TG+A P P+ +TF + E++ Q
Sbjct: 60 LSNGCICCSRSSELEDALLDLLDGIDKGQIDFDRLIIECTGMADPGPITQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA Q LN RF + ++ QV YADRI+L K D+ E + +L E
Sbjct: 120 RFLLDGIITLVDAMHADQQLN----RFSIAQS--QVGYADRILLTKTDVAPEHD--ALFE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ INA AP+ +G D+ + + G+ L + ++ V NS
Sbjct: 172 RLQRINAKAPIHKVVHGEADLSLLFDIEGFML---NDKLTVSNS---------------V 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+ + S+ I + L EV D +E L+ ++L R KGIL++ ++ +F
Sbjct: 214 FRFIPKQQNTIQSIVINLTHPVGLAEVSDLMEELLLSFADNLLRYKGILAIKEEPRRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV +AW +E+R++ LVFIG +L E +R+ F
Sbjct: 274 QGVQRLYSADWDRAWHDNEERLSVLVFIGMDLPEQKIREKF 314
>gi|417252426|ref|ZP_12044185.1| CobW/P47K family protein [Escherichia coli 4.0967]
gi|419292602|ref|ZP_13834680.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC11A]
gi|419297922|ref|ZP_13839950.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC11B]
gi|378123373|gb|EHW84791.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC11A]
gi|378137151|gb|EHW98434.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC11B]
gi|386216357|gb|EII32846.1| CobW/P47K family protein [Escherichia coli 4.0967]
Length = 318
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 141/283 (49%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNVQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DE + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DETPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|422776582|ref|ZP_16830236.1| CobW/HypB/UreG [Escherichia coli H120]
gi|323945861|gb|EGB41906.1| CobW/HypB/UreG [Escherichia coli H120]
Length = 318
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 141/283 (49%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DE + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DETPHSTMVFIGIQLPEEEIRAAFAG 315
>gi|300815964|ref|ZP_07096187.1| CobW/P47K family protein [Escherichia coli MS 107-1]
gi|415873026|ref|ZP_11540304.1| cobalamin synthesis protein/P47K family protein [Escherichia coli
MS 79-10]
gi|432808580|ref|ZP_20042490.1| GTPase [Escherichia coli KTE91]
gi|432932207|ref|ZP_20132109.1| GTPase [Escherichia coli KTE184]
gi|433191736|ref|ZP_20375769.1| GTPase [Escherichia coli KTE90]
gi|300531171|gb|EFK52233.1| CobW/P47K family protein [Escherichia coli MS 107-1]
gi|342931063|gb|EGU99785.1| cobalamin synthesis protein/P47K family protein [Escherichia coli
MS 79-10]
gi|431351803|gb|ELG38589.1| GTPase [Escherichia coli KTE91]
gi|431457217|gb|ELH37556.1| GTPase [Escherichia coli KTE184]
gi|431723558|gb|ELJ87503.1| GTPase [Escherichia coli KTE90]
Length = 318
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 141/283 (49%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DE + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DETPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|432600454|ref|ZP_19836710.1| GTPase [Escherichia coli KTE66]
gi|431144493|gb|ELE46187.1| GTPase [Escherichia coli KTE66]
Length = 318
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 141/283 (49%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DE + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DETPHSTMVFIGIQLPEEEIRAAFAG 315
>gi|193063724|ref|ZP_03044812.1| CobW/P47K family protein [Escherichia coli E22]
gi|209921808|ref|YP_002295892.1| putative GTP-binding protein YjiA [Escherichia coli SE11]
gi|260847159|ref|YP_003224937.1| GTPase [Escherichia coli O103:H2 str. 12009]
gi|293476605|ref|ZP_06665013.1| GTP-binding protein YjiA [Escherichia coli B088]
gi|301021381|ref|ZP_07185407.1| CobW/P47K family protein [Escherichia coli MS 69-1]
gi|307313723|ref|ZP_07593342.1| cobalamin synthesis protein P47K [Escherichia coli W]
gi|378714713|ref|YP_005279606.1| cobalamin synthesis protein P47K [Escherichia coli KO11FL]
gi|386611728|ref|YP_006127214.1| GTPase [Escherichia coli W]
gi|386703140|ref|YP_006166977.1| putative GTP-binding protein YjiA [Escherichia coli KO11FL]
gi|386712281|ref|YP_006176002.1| putative GTP-binding protein YjiA [Escherichia coli W]
gi|417151497|ref|ZP_11991024.1| CobW/P47K family protein [Escherichia coli 1.2264]
gi|417159899|ref|ZP_11996818.1| CobW/P47K family protein [Escherichia coli 99.0741]
gi|417176900|ref|ZP_12006696.1| CobW/P47K family protein [Escherichia coli 3.2608]
gi|417181923|ref|ZP_12008759.1| CobW/P47K family protein [Escherichia coli 93.0624]
gi|417244488|ref|ZP_12038431.1| CobW/P47K family protein [Escherichia coli 9.0111]
gi|417670068|ref|ZP_12319597.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
STEC_O31]
gi|418039781|ref|ZP_12678035.1| cobalamin synthesis protein P47K [Escherichia coli W26]
gi|419303409|ref|ZP_13845394.1| hypothetical protein ECDEC11C_5385 [Escherichia coli DEC11C]
gi|419309460|ref|ZP_13851342.1| hypothetical protein ECDEC11D_5117 [Escherichia coli DEC11D]
gi|419314422|ref|ZP_13856273.1| hypothetical protein ECDEC11E_5022 [Escherichia coli DEC11E]
gi|419803354|ref|ZP_14328526.1| cobalamin synthesis protein P47K [Escherichia coli AI27]
gi|419872715|ref|ZP_14394741.1| putative GTP-binding protein YjiA [Escherichia coli O103:H2 str.
CVM9450]
gi|419919187|ref|ZP_14437349.1| putative GTP-binding protein YjiA [Escherichia coli KD2]
gi|419929594|ref|ZP_14447266.1| putative GTP-binding protein YjiA [Escherichia coli 541-1]
gi|419951263|ref|ZP_14467458.1| putative GTP-binding protein YjiA [Escherichia coli CUMT8]
gi|422355146|ref|ZP_16435867.1| CobW/P47K family protein [Escherichia coli MS 117-3]
gi|422761622|ref|ZP_16815380.1| CobW/HypB/UreG [Escherichia coli E1167]
gi|432529238|ref|ZP_19766300.1| GTPase [Escherichia coli KTE233]
gi|432677505|ref|ZP_19912939.1| GTPase [Escherichia coli KTE142]
gi|432716947|ref|ZP_19951954.1| GTPase [Escherichia coli KTE9]
gi|432763227|ref|ZP_19997684.1| GTPase [Escherichia coli KTE48]
gi|432829921|ref|ZP_20063532.1| GTPase [Escherichia coli KTE135]
gi|432833046|ref|ZP_20066596.1| GTPase [Escherichia coli KTE136]
gi|432966081|ref|ZP_20155001.1| GTPase [Escherichia coli KTE203]
gi|433094711|ref|ZP_20280949.1| GTPase [Escherichia coli KTE138]
gi|192930711|gb|EDV83317.1| CobW/P47K family protein [Escherichia coli E22]
gi|209915067|dbj|BAG80141.1| conserved hypothetical protein [Escherichia coli SE11]
gi|257762306|dbj|BAI33803.1| predicted GTPase [Escherichia coli O103:H2 str. 12009]
gi|291321058|gb|EFE60500.1| GTP-binding protein YjiA [Escherichia coli B088]
gi|300398122|gb|EFJ81660.1| CobW/P47K family protein [Escherichia coli MS 69-1]
gi|306906546|gb|EFN37059.1| cobalamin synthesis protein P47K [Escherichia coli W]
gi|315063645|gb|ADT77972.1| predicted GTPase [Escherichia coli W]
gi|323380274|gb|ADX52542.1| cobalamin synthesis protein P47K [Escherichia coli KO11FL]
gi|324016882|gb|EGB86101.1| CobW/P47K family protein [Escherichia coli MS 117-3]
gi|324118547|gb|EGC12440.1| CobW/HypB/UreG [Escherichia coli E1167]
gi|378142898|gb|EHX04098.1| hypothetical protein ECDEC11D_5117 [Escherichia coli DEC11D]
gi|378144767|gb|EHX05938.1| hypothetical protein ECDEC11C_5385 [Escherichia coli DEC11C]
gi|378153611|gb|EHX14695.1| hypothetical protein ECDEC11E_5022 [Escherichia coli DEC11E]
gi|383394667|gb|AFH19625.1| putative GTP-binding protein YjiA [Escherichia coli KO11FL]
gi|383407973|gb|AFH14216.1| putative GTP-binding protein YjiA [Escherichia coli W]
gi|383477318|gb|EID69243.1| cobalamin synthesis protein P47K [Escherichia coli W26]
gi|384473772|gb|EIE57811.1| cobalamin synthesis protein P47K [Escherichia coli AI27]
gi|386159688|gb|EIH21502.1| CobW/P47K family protein [Escherichia coli 1.2264]
gi|386174390|gb|EIH46383.1| CobW/P47K family protein [Escherichia coli 99.0741]
gi|386179592|gb|EIH57071.1| CobW/P47K family protein [Escherichia coli 3.2608]
gi|386184912|gb|EIH67648.1| CobW/P47K family protein [Escherichia coli 93.0624]
gi|386210703|gb|EII21174.1| CobW/P47K family protein [Escherichia coli 9.0111]
gi|388333918|gb|EIL00529.1| putative GTP-binding protein YjiA [Escherichia coli O103:H2 str.
CVM9450]
gi|388388392|gb|EIL49969.1| putative GTP-binding protein YjiA [Escherichia coli KD2]
gi|388403125|gb|EIL63665.1| putative GTP-binding protein YjiA [Escherichia coli 541-1]
gi|388415022|gb|EIL74962.1| putative GTP-binding protein YjiA [Escherichia coli CUMT8]
gi|397782523|gb|EJK93391.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
STEC_O31]
gi|431058520|gb|ELD67915.1| GTPase [Escherichia coli KTE233]
gi|431208611|gb|ELF06821.1| GTPase [Escherichia coli KTE142]
gi|431268254|gb|ELF59731.1| GTPase [Escherichia coli KTE9]
gi|431314302|gb|ELG02254.1| GTPase [Escherichia coli KTE48]
gi|431381090|gb|ELG65725.1| GTPase [Escherichia coli KTE135]
gi|431390245|gb|ELG73954.1| GTPase [Escherichia coli KTE136]
gi|431475442|gb|ELH55246.1| GTPase [Escherichia coli KTE203]
gi|431605033|gb|ELI74432.1| GTPase [Escherichia coli KTE138]
Length = 318
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 141/283 (49%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DE + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DETPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|432800262|ref|ZP_20034255.1| GTPase [Escherichia coli KTE84]
gi|431352199|gb|ELG38978.1| GTPase [Escherichia coli KTE84]
Length = 318
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ +A + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVYADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|432614750|ref|ZP_19850888.1| GTPase [Escherichia coli KTE75]
gi|431158942|gb|ELE59533.1| GTPase [Escherichia coli KTE75]
Length = 318
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + ++ QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTIAQS--QVGYADRILLTKTDVAGEVE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPSRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DE + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DETPHSTMVFIGIQLPEDKIRAAFAG 315
>gi|218556876|ref|YP_002389790.1| putative GTP-binding protein YjiA [Escherichia coli IAI1]
gi|417132965|ref|ZP_11977750.1| CobW/P47K family protein [Escherichia coli 5.0588]
gi|419394661|ref|ZP_13935451.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC15A]
gi|419399838|ref|ZP_13940592.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC15B]
gi|419405082|ref|ZP_13945793.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC15C]
gi|419410242|ref|ZP_13950921.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC15D]
gi|419410552|ref|ZP_13951229.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC15E]
gi|432479272|ref|ZP_19721238.1| GTPase [Escherichia coli KTE210]
gi|218363645|emb|CAR01303.1| putative GTPase [Escherichia coli IAI1]
gi|378231945|gb|EHX92049.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC15A]
gi|378238988|gb|EHX98982.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC15B]
gi|378241837|gb|EHY01803.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC15C]
gi|378249707|gb|EHY09616.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC15D]
gi|378261562|gb|EHY21353.1| cobW/HypB/UreG, nucleotide-binding domain protein [Escherichia coli
DEC15E]
gi|386150819|gb|EIH02108.1| CobW/P47K family protein [Escherichia coli 5.0588]
gi|431011410|gb|ELD25485.1| GTPase [Escherichia coli KTE210]
Length = 318
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 141/283 (49%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DE + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DETPHSTMVFIGIQLPEDEIRSAFAG 315
>gi|417310955|ref|ZP_12097755.1| putative GTP-binding protein yjiA [Escherichia coli PCN033]
gi|338767379|gb|EGP22199.1| putative GTP-binding protein yjiA [Escherichia coli PCN033]
Length = 318
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 141/281 (50%), Gaps = 30/281 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QGV + WG DEK + +VFIG L E +R F
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEDEIRAAF 313
>gi|300926424|ref|ZP_07142220.1| CobW/P47K family protein [Escherichia coli MS 182-1]
gi|450230601|ref|ZP_21898081.1| GTP-binding protein YjiA [Escherichia coli O08]
gi|300417531|gb|EFK00842.1| CobW/P47K family protein [Escherichia coli MS 182-1]
gi|449312324|gb|EMD02589.1| GTP-binding protein YjiA [Escherichia coli O08]
Length = 318
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 141/283 (49%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAIHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DE + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DETPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|283788357|ref|YP_003368222.1| nucleotide-binding protein [Citrobacter rodentium ICC168]
gi|282951811|emb|CBG91521.1| putative nucleotide-binding protein [Citrobacter rodentium ICC168]
Length = 318
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 145/283 (51%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKK-QGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CCT +L LL L QG FD +VIE TG+A P P+++TF + E++ Q
Sbjct: 60 LTNGCICCTRSNELEDALLDLLDNLDQGNISFDRLVIECTGMADPGPIVQTFFSHEVICQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + ++ QV YADRI+L K D+ E+E +L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTIAQS--QVGYADRILLTKTDVAGESE--ALRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLSLLFDTNGFMLE------------------ENVVSAKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ +V +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDIGDVSRVMENLLLESADKLLRYKGMLWIEGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DE ++LVFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DETPHSQLVFIGIQLPEEKIRAAFAG 315
>gi|432883471|ref|ZP_20098839.1| GTPase [Escherichia coli KTE158]
gi|431421066|gb|ELH03282.1| GTPase [Escherichia coli KTE158]
Length = 318
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 141/283 (49%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKDNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLHE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 315
>gi|422828451|ref|ZP_16876622.1| hypothetical protein ESNG_01127 [Escherichia coli B093]
gi|371613437|gb|EHO01935.1| hypothetical protein ESNG_01127 [Escherichia coli B093]
Length = 318
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 141/283 (49%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA AP+ +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPIYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DE + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DETPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|237729247|ref|ZP_04559728.1| CobW/P47K family protein [Citrobacter sp. 30_2]
gi|226908976|gb|EEH94894.1| CobW/P47K family protein [Citrobacter sp. 30_2]
Length = 318
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 144/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CCT +L LL L K FD +VIE TG+A P P+I+TF + E++ +
Sbjct: 60 LTNGCICCTRSSELEDALLDLLDNLDKGAINFDRLVIECTGMADPGPIIQTFFSHEVICE 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + ++ QV YADRI+L K D+ E+E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTIAQS--QVGYADRILLTKTDVAGESE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA AP+ +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPIYTVTHGDIDLSLLFDTNGFMLE------------------ENVVSAKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +++ +V +E L+ E E L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVNISDVSRVMENLLLESAEKLLRYKGMLWIEGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DE+ + LVFIG NL E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEQPHSLLVFIGINLPEDEIRAAFAG 315
>gi|403289074|ref|XP_003935693.1| PREDICTED: COBW domain-containing protein 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 376
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 146/287 (50%), Gaps = 44/287 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + +K + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLKAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRATIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + S+ H
Sbjct: 222 SINGLGQILETQRSSLQKKL---------------------------------QHVPGTQ 248
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
H+ D ++ ++T G ++++ +++ L+ EK ++ R+KG++S+
Sbjct: 249 PHL-DQSIVTITFEVPGNAKEEQLNVFIQNLLWEKTVRNKDNHCMEVIRLKGLVSIKDRR 307
Query: 234 QQYVFQGVHSTLD-GCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH D W + +R N+LV IGRNLD+ L++ F
Sbjct: 308 QQVIVQGVHELYDLEVTPVCWKDETERTNRLVLIGRNLDKDILKQLF 354
>gi|410227934|gb|JAA11186.1| COBW domain containing 1 [Pan troglodytes]
Length = 376
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 148/288 (51%), Gaps = 46/288 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+VR + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVRDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL + KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTQEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + S+ H
Sbjct: 222 SINGLGQILETQRSSLQKKL---------------------------------QHVPGTQ 248
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 249 PHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKS 307
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV +GRNLD+ L++ F
Sbjct: 308 QQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLLGRNLDKDILKQLF 354
>gi|398836758|ref|ZP_10594086.1| putative GTPase, G3E family [Herbaspirillum sp. YR522]
gi|398210824|gb|EJM97458.1| putative GTPase, G3E family [Herbaspirillum sp. YR522]
Length = 404
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 162/307 (52%), Gaps = 40/307 (13%)
Query: 2 VNNGCLCCTVRGDLVKML----LQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVS 57
+++GCLCCT+RGDL K L + A+ + +FD +VIETTGLA P P++ T TD ++
Sbjct: 93 MSSGCLCCTIRGDLKKTLKDITWRFAEGGRRKFDRVVIETTGLASPVPILHTLMTDSFIA 152
Query: 58 QYVKLDGVITLVDSKHAMQHL-NEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSL 116
+ +LDGVIT VD+ + M L N + EAV+Q A ADR++L K DL E L L
Sbjct: 153 ERYRLDGVITTVDAVNGMATLDNHI-------EAVQQAAVADRLLLTKSDLADEATLAGL 205
Query: 117 TERIKHINAMAPVKLAKYGSVDMDFVLGVGGY-------DLER-IDSEVHVDNSHCATHH 168
R++ +N AP L ++G +D +L G + D+ R ++ E D++
Sbjct: 206 QARLRTLNPGAPQYLPRHGDIDAARLLDAGLFRPGEKTPDVARWLNDEAFADDAQA---- 261
Query: 169 HES--------AHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDL 220
H+S HGHH H + HD + + + ++ D+WL L+ KG ++
Sbjct: 262 HQSHDHGHHGHDHGHHHHDHDVNRHDDHIRAFCFTFDAPIEPALFDEWLSLLVGFKGPNI 321
Query: 221 YRMKGILSVSGSEQQYVFQGV----HSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
R+KGIL+++G + V GV H T+ AW P R +++VFI R+++ +
Sbjct: 322 LRIKGILNLAGQDLPTVIHGVQHIFHPTVT---LPAW-PSADRRSRIVFITRDIERATIE 377
Query: 277 KGFKGCL 283
+ F +
Sbjct: 378 RSFDAFM 384
>gi|109111713|ref|XP_001092548.1| PREDICTED: COBW domain-containing protein 3-like isoform 3 [Macaca
mulatta]
Length = 376
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 148/288 (51%), Gaps = 46/288 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRMTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + S+ H
Sbjct: 222 SINGLGQILETQRSSLQKKL---------------------------------QHVPGTQ 248
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 249 PHL-DQSIVTITFEVPGNAKEEHLNIFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKP 307
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 308 QQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLIGRNLDKDILKQLF 354
>gi|223941779|ref|NP_001138828.1| COBW domain-containing protein 1 isoform 3 [Homo sapiens]
Length = 376
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 147/288 (51%), Gaps = 46/288 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDSGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + S+ H
Sbjct: 222 SINGLGQILETQRSSLQKKL---------------------------------QHVPGTQ 248
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 249 PHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKS 307
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV +GRNLD+ L++ F
Sbjct: 308 QQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLLGRNLDKDILKQLF 354
>gi|13182779|gb|AAK14935.1|AF212253_1 HCOBP [Homo sapiens]
Length = 376
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 150/288 (52%), Gaps = 46/288 (15%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDSGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHH 181
IN + + + +RI + + H
Sbjct: 222 SINGLGQI------------------LETQRISLQKKL---------------QHVPGTQ 248
Query: 182 NHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGSE 233
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 249 PHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKS 307
Query: 234 QQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV +GRNLD+ L++ F
Sbjct: 308 QQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLLGRNLDKDILKQLF 354
>gi|365104083|ref|ZP_09333744.1| hypothetical protein HMPREF9428_02825 [Citrobacter freundii
4_7_47CFAA]
gi|363644696|gb|EHL83977.1| hypothetical protein HMPREF9428_02825 [Citrobacter freundii
4_7_47CFAA]
Length = 318
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 144/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CCT +L LL L K FD +VIE TG+A P P+I+TF + E++ +
Sbjct: 60 LTNGCICCTRSSELEDALLDLLDNLDKGAINFDRLVIECTGMADPGPIIQTFFSHEVICE 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E+E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGESE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA AP+ +G +D+ + G+ LE E+
Sbjct: 172 RLSRINARAPIYTVTHGDIDLAQLFDTNGFMLE------------------ENVVSAKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +++ +V +E L+ E E L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVNISDVSRVMENLLLESAEKLLRYKGMLWIEGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DE+ ++LVFIG NL E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEQPHSQLVFIGINLPEDEIRAAFAG 315
>gi|345871088|ref|ZP_08823036.1| cobalamin synthesis protein P47K [Thiorhodococcus drewsii AZ1]
gi|343920922|gb|EGV31649.1| cobalamin synthesis protein P47K [Thiorhodococcus drewsii AZ1]
Length = 371
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 154/285 (54%), Gaps = 27/285 (9%)
Query: 2 VNNGCLCCTVRGDLVKML----LQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVS 57
+++GCLCCT+RGDLV L + ++ + QFD +VIETTGLA PAP+++T T +++
Sbjct: 63 MSSGCLCCTIRGDLVSTLKDAHWRFSRGGESQFDRVVIETTGLADPAPIVQTLMTVGVIT 122
Query: 58 QYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLT 117
+ + DGV+T VD +A + L + +P EA++Q A AD ++L K DL + +L
Sbjct: 123 RRYRFDGVVTTVDLTNAERTL-DTQP-----EALKQAAMADCLLLTKADLAEPAAVTALE 176
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYD--------LERIDSEVHVDNSHCATHHH 169
+R+ IN A G+V D + G+G +D ++ E +D H
Sbjct: 177 QRLLAINPSARRLRVHNGAVAPDSLFGLGLFDPATKIPDVARWLNEEAFLDAQDAHGHDA 236
Query: 170 ESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSV 229
HGHH H N HD + + +V + LD +D WL++ + G D+ R+KGIL+V
Sbjct: 237 HLGHGHHHDHDLNR-HDERIGAFCLVLDQPLDSGLIDAWLDQQLSLCGRDMLRIKGILNV 295
Query: 230 SGSEQQYVFQGV----HSTLDGCPGKAWGPDEKRINKLVFIGRNL 270
G V QGV H T++ AW D++R +KLVFI R +
Sbjct: 296 QGRSGPLVIQGVQHVRHPTME---LPAWPSDDRR-SKLVFITRGI 336
>gi|157147642|ref|YP_001454961.1| putative GTP-binding protein YjiA [Citrobacter koseri ATCC BAA-895]
gi|157084847|gb|ABV14525.1| hypothetical protein CKO_03445 [Citrobacter koseri ATCC BAA-895]
Length = 322
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 146/283 (51%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKK-QGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CCT +L LL L QG FD +VIE TG+A P P+I+TF + +++ Q
Sbjct: 64 LTNGCICCTRSSELEDALLDLLDNLDQGNIHFDRLVIECTGMADPGPIIQTFFSHDVICQ 123
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI+LVD+ HA + +N+ F + ++ QV YADRI+L K D+ +E L E
Sbjct: 124 RYLLDGVISLVDAVHADEQMNQ----FTIAQS--QVGYADRILLTKTDVAGVSE--KLRE 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE +N AT H
Sbjct: 176 RLARINARAPVYTVTHGDIDLSLLFDTNGFMLE--------ENVVSATPRF-----HFIA 222
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
N +SS+ + + +D+ +V +E L+ E E L R KG+L + G + +F
Sbjct: 223 DKQND-----ISSIVVELDYPVDISDVSRVMENLLLESAEKLLRYKGMLWIEGEPNRLLF 277
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DE+ + LVFIG L E +R F G
Sbjct: 278 QGVQRLYSADWDRPWG-DEQPHSTLVFIGIQLPEDEIRAAFAG 319
>gi|420378070|ref|ZP_14877588.1| hypothetical protein SF123566_7691 [Shigella flexneri 1235-66]
gi|391291880|gb|EIQ50241.1| hypothetical protein SF123566_7691 [Shigella flexneri 1235-66]
Length = 318
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 144/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CCT +L LL L K FD +VIE TG+A P P+I+TF + E++ +
Sbjct: 60 LTNGCICCTRSSELEDALLDLLDNLDKGAINFDRLVIECTGMADPGPIIQTFFSHEVICE 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + ++ QV YADRI+L K D+ E+E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTIAQS--QVGYADRILLTKTDVAGESE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA AP+ +G +D+ + G+ LE E+
Sbjct: 172 RMARINARAPMYTVTHGDIDLSLLFDTNGFMLE------------------ENVVSAKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +++ +V +E L+ E E L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVNISDVSRVMENLLLESAEKLLRYKGMLWIEGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DE+ + LVFIG NL E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEQPHSLLVFIGINLPEDEIRAAFAG 315
>gi|384252504|gb|EIE25980.1| cobW-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 405
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 163/290 (56%), Gaps = 21/290 (7%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETT-GLAKPAPVIETFCTDELVSQYVKL 62
NGCLCC+V+ D ++ L L ++++ FDHI+IETT GLA P PV + TD + + L
Sbjct: 119 NGCLCCSVKDDFLRALEALMEQRR-NFDHILIETTAGLADPGPVAASLWTDVELHSSICL 177
Query: 63 DGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE-RIK 121
D +IT+VD+ + + L + P +NEA Q+AYAD I+LNK+D+V E S TE RIK
Sbjct: 178 DAIITVVDALNLQKQLLDRLPTEGINEAERQIAYADVILLNKVDMVETPEDLSATEARIK 237
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVD-NSHCATHHHESAHGHHEGHH 180
IN+ A + ++ VD+ VL G Y + + SE D +S+ A++ E H H E
Sbjct: 238 VINSEAVLLHTQHSRVDIKAVLDRGMY-RDSLWSERWSDPDSNEASNVREIDHSHTER-- 294
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGE------DLYRMKGILSVSGSEQ 234
+ ++++T+ ++ LDL+ W+E L+ + G+ ++ RMKGI+ V+ S++
Sbjct: 295 ------AGITTLTLRTDLRLDLERFKRWMEDLLWDDGDGGAPRSEILRMKGIVHVTKSDE 348
Query: 235 QYVFQGVHSTLDGCPGKAWGPDEKRI--NKLVFIGRNLDETALRKGFKGC 282
++ Q V D P + +++V IGR D +AL GF+ C
Sbjct: 349 PHLVQAVRELYDITEAPHRSPAGAGLSQSRVVLIGRIKDPSALHAGFEHC 398
>gi|374371611|ref|ZP_09629561.1| cobalamin synthesis protein, partial [Cupriavidus basilensis OR16]
gi|373096862|gb|EHP38033.1| cobalamin synthesis protein, partial [Cupriavidus basilensis OR16]
Length = 261
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 134/265 (50%), Gaps = 18/265 (6%)
Query: 30 FDHIVIETTGLAKPAPVIETFCTDELVSQYVKLDGVITLVDSKHAMQHLNEVKPRFVVNE 89
FD +VIETTG+A P PV +TF D+ ++Q LD VITLVD+KHA Q L++ + E
Sbjct: 5 FDRVVIETTGVANPGPVAQTFFMDDEIAQRYLLDAVITLVDAKHANQQLDKQE------E 58
Query: 90 AVEQVAYADRIILNKIDLVTETELGSLTERIKHINAMAPVKLAKYGSVDMDFVLGVGGYD 149
A QV +AD I + K DLV E E+ L R+ H+N APV+ A +G +D + + G++
Sbjct: 59 AQRQVGFADAIFMTKADLVPEGEIADLRHRLLHMNPRAPVRTAHFGEAPIDTIFDLRGFN 118
Query: 150 LERIDSEVHVDNSHCATHHHESAHGHHEGHHHNHMHDSA----------VSSVTIVSEGT 199
L C S + H H + S SE
Sbjct: 119 LNEKTGN-RPGFPACRGRRARSRPRARPWRPYGHGHQHDHHHHHNHTDRIGSFVFRSEKP 177
Query: 200 LDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKR 259
+ +++++L ++ GE L R KG+L + +++ VFQGVH + G WG DE
Sbjct: 178 FNYAKLEEFLSGILSVYGEKLLRYKGVLYMDAVDRKVVFQGVHQLMGSDIGTKWG-DETP 236
Query: 260 INKLVFIGRNLDETALRKGFKGCLA 284
K+VFIG +L + A+ KG CLA
Sbjct: 237 GTKMVFIGVDLPKDAILKGLATCLA 261
>gi|453064914|gb|EMF05878.1| GTP-binding protein YjiA [Serratia marcescens VGH107]
Length = 320
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 152/283 (53%), Gaps = 27/283 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL---AKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CC+ +L LL L Q FD ++IE TG+A P P+ +TF + E++ +
Sbjct: 60 LSNGCICCSKSNELADALLDLLDGVDSGQLAFDRLIIECTGMADPGPITQTFFSHEILCE 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA Q L++ F + +A QV YADRI+L K D+ + E +L +
Sbjct: 120 RFLLDGIITLVDAAHAEQQLSQ----FSIAQA--QVGYADRILLTKTDVAPDCE--ALIQ 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ +NA APV +G +D+ + + G+ L + ++++ + H
Sbjct: 172 RLQRMNARAPVYQVTHGDIDLSVLFDIEGFTL---NDKLNLTPATPLFHRIPQPQ----- 223
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
S + S+ + E L L ++ + +E L+ E ++L R KGILS+ ++ +F
Sbjct: 224 --------SDIRSIVVTLERPLPLMQISEVMEGLLLEYADNLLRYKGILSIEDEPRRLLF 275
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + + W P+E+R + LVFIG +L E +R G
Sbjct: 276 QGVQRLYNADWDREWLPEEERKSTLVFIGVDLPEEEIRGRIGG 318
>gi|377576607|ref|ZP_09805591.1| putative GTP-binding protein YjiA [Escherichia hermannii NBRC
105704]
gi|377542639|dbj|GAB50756.1| putative GTP-binding protein YjiA [Escherichia hermannii NBRC
105704]
Length = 339
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 140/278 (50%), Gaps = 11/278 (3%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL-AKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CC+VRG+ L +L A++++G+ FD +++ETTGLA PAP+I+TF +E + +
Sbjct: 62 LSNGCVCCSVRGEFTAALSELLAQRERGELTFDRLIVETTGLADPAPIIQTFFVEEALRE 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
++LD VITL D H + L+E P A Q+ +ADRI+L K D E +
Sbjct: 122 ALRLDAVITLADCHHISRQLDE-HP-----VAASQLGFADRILLTKADTCDEQQHSEALA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
RI IN A + + G D L + + L D H + A
Sbjct: 176 RIHQINNKAEIYQIENGVCPADLWLDINAFALS--DGNGLTQGFHAIRATDQPAPPRFTP 233
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
+ + G +DL + ++E+ +E G D+ R KG+L+++G+ Q+ +
Sbjct: 234 FKEIKRSWNDAIQAHVFEAGWMDLHKAGAFMEQCVERYGNDMLRYKGVLAIAGNPQRLIV 293
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
QGVH + G AW E ++LV IGR L LR
Sbjct: 294 QGVHKVVGFDYGSAWSEAETPRSRLVIIGRYLPVEELR 331
>gi|257095786|ref|YP_003169427.1| cobalamin synthesis protein P47K [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257048310|gb|ACV37498.1| cobalamin synthesis protein P47K [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 446
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 107/151 (70%), Gaps = 7/151 (4%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K++ +FDHI++ETTG+A P PV +TF D+ + +
Sbjct: 60 MNNGCICCTVRGDLIRILGSLMKRRD-KFDHILVETTGMADPGPVAQTFFVDDDLRELFS 118
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG++TLVD+KH HL++ +E EQ+A+AD ++LNK DLV+ EL +L R+
Sbjct: 119 LDGIVTLVDAKHVHLHLDD------SSECKEQIAFADVLVLNKTDLVSGHELEALERRVT 172
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER 152
++N+MA V A+ SV + +L +GG+DL+R
Sbjct: 173 NMNSMAKVLRAQNASVPIAAILDIGGFDLDR 203
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 183 HMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVFQGVH 242
H HD V+SV I EG +D D + W+ +L+ +KG D++RMKGIL++ GS ++VFQGVH
Sbjct: 346 HSHDDQVTSVGIHLEGEIDGDRLSQWVSQLLRDKGTDIFRMKGILNIKGSPSRFVFQGVH 405
Query: 243 STLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
DG + WG E R + LVFIGR LD L +GF CLA
Sbjct: 406 MLFDGREDRPWGI-EPRASDLVFIGRKLDRDELTRGFARCLA 446
>gi|56476739|ref|YP_158328.1| GTPase [Aromatoleum aromaticum EbN1]
gi|56312782|emb|CAI07427.1| hypothetical protein, putative GTPase [Aromatoleum aromaticum EbN1]
Length = 356
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 22/288 (7%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQ---FDHIVIETTGLAKPAPVIETFCTDELVSQYV 60
NGCLCCTVRGD + L L++ + + FD ++IETTG+A P P+++TF + +
Sbjct: 65 NGCLCCTVRGDFARALNTLSESSEAEGFVFDRVLIETTGIADPGPIVQTFLAETTILTRF 124
Query: 61 KLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
LDGV+TLVDS HA+ L+ + R QVAYADR++L K DL TE+++ ++ R+
Sbjct: 125 HLDGVVTLVDSVHALAQLDMTENR-------AQVAYADRLLLTKFDLATESQIEAIGRRV 177
Query: 121 KHINAMA---PVKLAKYGSVD-MDFVLGVGGYDLERIDSE--VHVDNSHCATHHHESAHG 174
+N A V L VD ++ + GY + + + + AT
Sbjct: 178 AEMNPRAELLSVDLHNAPIVDVLNHLFDTHGYTFDYVPRKELTQIKRRRPATDKRFCLAA 237
Query: 175 HHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQ 234
H S + S S LDL+ ++ + + G L+R KGI+ +
Sbjct: 238 ------PTSRHTSDIVSYIFESSVPLDLERLNVFFDMAQRRYGPRLWRYKGIVWAAHQRP 291
Query: 235 QYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGC 282
+ V QGV S L G W E R L+FIG+ +D + + + C
Sbjct: 292 RLVVQGVQSLLQITGGTIWRTFEPRQTLLIFIGQAIDPAWIEEMLRRC 339
>gi|451965359|ref|ZP_21918618.1| putative GTP-binding protein [Edwardsiella tarda NBRC 105688]
gi|451315805|dbj|GAC63980.1| putative GTP-binding protein [Edwardsiella tarda NBRC 105688]
Length = 347
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 144/286 (50%), Gaps = 19/286 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CC+VRG+ L L +++Q FDH++IE+TGLA PAP+++TF + +
Sbjct: 62 LSNGCVCCSVRGEFSAALRDLLQRRQQGALTFDHLIIESTGLADPAPIVQTFFVEPTLRD 121
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
++LD VI L D++H L++ A Q+ ADRI+L K D V +L
Sbjct: 122 ALRLDAVIALADAQHLATQLDQHP------VAAAQLGCADRILLTKCDTVDTAHCETLLA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
RI+ IN+ A + ++G+ L + + L D H T H ++
Sbjct: 176 RIRRINSRAEIYQVEHGACPPALWLDLHAFTLS--DELSLSQGWHTLTPHGDAPP---RL 230
Query: 179 HHHNHMHDSAVS-----SVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSE 233
+ SA++ ++ G +DL + +ER +E+ G D+ R KGIL+++
Sbjct: 231 RPFRPLPSSAITVDDAIQAHLLEGGVMDLQRIGQTMERWVEQYGHDMLRYKGILAINEHP 290
Query: 234 QQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
Q+ V QG+H + G W +E ++LV IGR L T LR F
Sbjct: 291 QRLVVQGIHRVVGFDYGSPWRTEEIPCSRLVIIGRQLPITQLRVDF 336
>gi|416018650|ref|ZP_11565578.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. glycinea str. B076]
gi|320322622|gb|EFW78715.1| cobalamin synthesis protein/P47K family protein [Pseudomonas
syringae pv. glycinea str. B076]
Length = 325
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 154/282 (54%), Gaps = 26/282 (9%)
Query: 2 VNNGCLCCTVRGDLVKML-LQLAKKKQGQ--FDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CCT+ DL K L L L + G+ FD +VIE TGLA PAPV +TF DE + +
Sbjct: 63 LSNGCVCCTIHTDLTKALYLLLERLDSGEIAFDRLVIECTGLADPAPVAQTFFIDEELRE 122
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA HL + A Q+ +ADR++++K DLV + +L+
Sbjct: 123 RYILDGIITLVDAAHADAHLAQTI-------AQAQIGFADRLLVSKRDLVDDATFDALSA 175
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ IN AP+++ ++G++D+ +L V G++L + D + G+
Sbjct: 176 RLTRINRRAPIRIVEHGNIDLAELLDVRGFNL-------NADLGGGMILRPLALVGN--- 225
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
++S+ + SE L+LD + +++ L+E+ G+ L R KG+L++ ++ VF
Sbjct: 226 ------SGDRITSLVLRSEKPLNLDRLSEFMNELLEDHGKQLLRYKGVLNIEDEPRKMVF 279
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFK 280
QGV W EKR + +VFI L E +R GF+
Sbjct: 280 QGVLKLYGFDWDTEWAEGEKRESVIVFIADELPEEKIRAGFE 321
>gi|294637350|ref|ZP_06715645.1| CobW/P47K family protein [Edwardsiella tarda ATCC 23685]
gi|291089473|gb|EFE22034.1| CobW/P47K family protein [Edwardsiella tarda ATCC 23685]
Length = 361
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 144/286 (50%), Gaps = 19/286 (6%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CC+VRG+ L L +++Q FDH++IE+TGLA PAP+++TF + +
Sbjct: 76 LSNGCVCCSVRGEFSAALRDLLQRRQQGALTFDHLIIESTGLADPAPIVQTFFVEPTLRD 135
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
++LD VI L D++H L++ A Q+ ADRI+L K D V +L
Sbjct: 136 ALRLDAVIALADAQHLATQLDQHP------VAAAQLGCADRILLTKCDTVDTAHCETLLA 189
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
RI+ IN+ A + ++G+ L + + L D H T H ++
Sbjct: 190 RIRRINSRAEIYQVEHGACPPALWLDLHAFTLS--DELSLSQGWHTLTPHGDAPP---RL 244
Query: 179 HHHNHMHDSAVS-----SVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSE 233
+ SA++ ++ G +DL + +ER +E+ G D+ R KGIL+++
Sbjct: 245 RPFRPLPSSAITVDDAIQAHLLEGGVMDLQRIGQTMERWVEQYGHDMLRYKGILAINEHP 304
Query: 234 QQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
Q+ V QG+H + G W +E ++LV IGR L T LR F
Sbjct: 305 QRLVVQGIHRVVGFDYGSPWRTEEIPCSRLVIIGRQLPITQLRVDF 350
>gi|83592946|ref|YP_426698.1| cobalamin synthesis protein/P47K [Rhodospirillum rubrum ATCC 11170]
gi|386349677|ref|YP_006047925.1| cobalamin synthesis protein/P47K [Rhodospirillum rubrum F11]
gi|83575860|gb|ABC22411.1| Cobalamin synthesis protein/P47K [Rhodospirillum rubrum ATCC 11170]
gi|346718113|gb|AEO48128.1| cobalamin synthesis protein/P47K [Rhodospirillum rubrum F11]
Length = 366
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 151/308 (49%), Gaps = 33/308 (10%)
Query: 1 MVNNGCLCCTVRGDLVKML----LQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELV 56
++N GCLCCTVRGD+V L L+ + +F + IETTGLA PAP+I T TD L+
Sbjct: 59 LLNAGCLCCTVRGDMVTALHDLFLKRVRGDVPEFQRLAIETTGLADPAPIIHTLMTDPLI 118
Query: 57 SQYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSL 116
+LDGV+T++D+ + + L+E EAV+Q A ADR++L+K DLV ++ +L
Sbjct: 119 GGRFRLDGVVTVIDAVNGEKELDEHI------EAVKQAAVADRLVLSKTDLVEDS--AAL 170
Query: 117 TERIKHINAMAPVKLAKYGSVDMDFVLGVGGYD--------LERIDSEVHVDNSHCATHH 168
R+K +N A V A G + D +L G + + + E + D H
Sbjct: 171 KARLKALNPAAIVLEAIEGDIHPDALLDCGLFSSSGKAPDVAQWLRDEAYRDRDEQHHGH 230
Query: 169 HESAHGHHEGHHHN------------HMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEK 216
H H H + HD+ +SS + + LD + LE LI K
Sbjct: 231 GHHHDHDHHDHDHGHDHHHDHHPHDVNRHDARISSFCLTFDEPLDWELFVSALEMLISSK 290
Query: 217 GEDLYRMKGILSVSGSEQQYVFQGVHSTL-DGCPGKAWGPDEKRINKLVFIGRNLDETAL 275
GEDL R+KGIL V G ++ GV P AW E + +KLVFI R+LD +
Sbjct: 291 GEDLLRIKGILDVIGQDRPIAVHGVQHVFHPPVPLPAWPAGEPKTSKLVFITRDLDRATV 350
Query: 276 RKGFKGCL 283
+ L
Sbjct: 351 EGLLRAAL 358
>gi|422957717|ref|ZP_16969931.1| hypothetical protein ESQG_01426 [Escherichia coli H494]
gi|371597628|gb|EHN86448.1| hypothetical protein ESQG_01426 [Escherichia coli H494]
Length = 318
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 141/283 (49%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQG---QFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDKLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAIHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DE + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DETPHSTMVFIGIQLPEDEIRAAFAG 315
>gi|161504921|ref|YP_001572033.1| putative GTP-binding protein YjiA [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|160866268|gb|ABX22891.1| hypothetical protein SARI_03050 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 318
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 144/284 (50%), Gaps = 32/284 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQ----FDHIVIETTGLAKPAPVIETFCTDELVS 57
+ NGC+CCT R + ++ L + + FD +VIE TG+A P P+I+TF + +++
Sbjct: 60 LTNGCICCT-RSNELEDALLDLLDSRDRGDIDFDRLVIECTGMADPGPIIQTFFSHDMLC 118
Query: 58 QYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLT 117
+ LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ ++E L
Sbjct: 119 ERYLLDGVIALVDAVHANEQMNQ----FTI--AQSQVGYADRILLTKTDVAGDSE--KLR 170
Query: 118 ERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHE 177
ER+ INA APV +G +D++ + G+ LE E+
Sbjct: 171 ERLARINARAPVYTVVHGDIDLNKLFNTSGFMLE------------------ENVLASQP 212
Query: 178 GHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYV 237
H + VSS+ + + +D+ +V +E L+ E + L R KG+L + G + +
Sbjct: 213 RFHFIADKQNDVSSIVVELDYPVDISDVSRVMENLLLESADKLLRYKGMLWIDGEPNRLL 272
Query: 238 FQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
FQGV + WG DE+ + LVFIG L E +R F G
Sbjct: 273 FQGVQRLYSADWDRPWG-DEQPRSTLVFIGIQLPEAEIRSAFAG 315
>gi|283835004|ref|ZP_06354745.1| cobalamin synthesis protein/P47K family protein [Citrobacter
youngae ATCC 29220]
gi|291069292|gb|EFE07401.1| cobalamin synthesis protein/P47K family protein [Citrobacter
youngae ATCC 29220]
Length = 318
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 144/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CCT +L LL L K FD +VIE TG+A P P+I+TF + +++ +
Sbjct: 60 LTNGCICCTRSSELEDALLDLLDNLDKGTIHFDRLVIECTGMADPGPIIQTFFSHDVICE 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + ++ QV YADRI+L K D+ E+E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTIAQS--QVGYADRILLTKTDVAGESE--KLRE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA AP+ +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPIYTVTHGDIDLSLLFDTNGFMLE------------------ENVVNAKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +++ +V +E L+ E E L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVNISDVSRVMENLLLESAEKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DE+ + LVFIG NL E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEQPHSLLVFIGINLPEDEIRAAFAG 315
>gi|448240291|ref|YP_007404344.1| putative GTPase [Serratia marcescens WW4]
gi|445210655|gb|AGE16325.1| putative GTPase [Serratia marcescens WW4]
Length = 317
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 149/278 (53%), Gaps = 27/278 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQL---AKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
++NGC+CC+ +L LL L Q FD ++IE TG+A P P+ +TF + E++ +
Sbjct: 60 LSNGCICCSKSNELADALLDLLDGVDSGQLTFDRLIIECTGMADPGPITQTFFSHEILCE 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDG+ITLVD+ HA Q L++ F + +A QV YADRI+L K D+ + E +L +
Sbjct: 120 RFLLDGIITLVDAAHAEQQLSQ----FSIAQA--QVGYADRILLTKTDVAPDCE--ALIQ 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R++ +NA AP+ +G +D+ + + G+ L ++ + A H
Sbjct: 172 RLQRMNARAPLYQVTHGDIDLSVLFDIEGFTLND-----KLNLTPPAPLFHRIPQPQ--- 223
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
S + S+ + E L L ++ + +E L+ E ++L R KGILS+ ++ +F
Sbjct: 224 --------SDIRSIVVTLERPLPLMQISEVMEGLLLEYADNLLRYKGILSIEDEPRRLLF 275
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALR 276
QGV + + W P+E+R + LVFIG +L E +R
Sbjct: 276 QGVQRLYNADWDREWLPEEERKSTLVFIGVDLPEEEIR 313
>gi|347755787|ref|YP_004863351.1| putative GTPase [Candidatus Chloracidobacterium thermophilum B]
gi|347588305|gb|AEP12835.1| Putative GTPases (G3E family) [Candidatus Chloracidobacterium
thermophilum B]
Length = 455
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 104/151 (68%), Gaps = 8/151 (5%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+NNGC+CCTVRGDL+++L L K++ +FD+I++ETTGLA P PV +TF DE + + +
Sbjct: 69 MNNGCICCTVRGDLIRILGSLMKRRH-KFDYILVETTGLADPGPVAQTFFVDEEIQRQTR 127
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG++TLVD+KH +H F NE EQ+A+AD I++NK DLV L L +RI+
Sbjct: 128 LDGIVTLVDAKHVWEH-------FDTNEVQEQIAFADVILINKTDLVDAATLERLEQRIR 180
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYDLER 152
+NA A ++ ++ + ++ +L +G +DL+R
Sbjct: 181 AMNATANIRRTQHANAPVEALLDIGAFDLDR 211
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 169 HESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILS 228
E A H + +H HD+ V+SV I G LD ++ W+ L++ +G D++RMKGILS
Sbjct: 339 REVAPLHSRAYKPDHEHDAEVTSVGIKLPGDLDPKRLNAWIGELLQTQGPDIFRMKGILS 398
Query: 229 VSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKGCL 283
++G +++VFQGVH DG P + WG E R N LVFIGR+LD AL GF+ CL
Sbjct: 399 LAGDPRRFVFQGVHMVFDGRPDRPWG-AEPRHNALVFIGRHLDRAALEAGFRSCL 452
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,430,450,256
Number of Sequences: 23463169
Number of extensions: 182484240
Number of successful extensions: 949718
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4813
Number of HSP's successfully gapped in prelim test: 2589
Number of HSP's that attempted gapping in prelim test: 882379
Number of HSP's gapped (non-prelim): 30881
length of query: 284
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 143
effective length of database: 9,050,888,538
effective search space: 1294277060934
effective search space used: 1294277060934
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)