BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023301
(284 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VEH6|CBWD1_MOUSE COBW domain-containing protein 1 OS=Mus musculus GN=Cbwd1 PE=2 SV=1
Length = 393
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 158/293 (53%), Gaps = 28/293 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 101 LRNGCLCCSVKDSGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 159
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP +VNEA QVA AD I++NK DLV+E EL +L I+
Sbjct: 160 LDGIITVVDSKYGLKHLTEEKPDGLVNEATRQVALADMILINKTDLVSEEELNNLRTTIR 219
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + V + V + +L + YD L I + + + A H
Sbjct: 220 SINGLGKVLETQRSRVHLSNILDLHAYDILSGISLQKKLQHVSTAPH------------- 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
D ++ +VT G+ + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 ----LDQSIVTVTFEVPGSAKEECLNVFIQNLLWEKNVKNKDGHCMEVIRLKGLVSIKDK 322
Query: 233 EQQYVFQGVHSTLDGCPGKA-WGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QQ + QG+H D W D +R +LVFIGRNLD+ L++ F +A
Sbjct: 323 PQQMIVQGIHELYDLEESLVNWKDDAERACQLVFIGRNLDKDVLQQLFLTAVA 375
>sp|Q99MB4|CBWD1_RAT COBW domain-containing protein 1 OS=Rattus norvegicus GN=Cbwd1 PE=2
SV=2
Length = 394
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 159/293 (54%), Gaps = 28/293 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + +K + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 102 LRNGCLCCSVKDNGLKAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 160
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP +VNEA QVA AD I++NK DLV+E EL L I+
Sbjct: 161 LDGIITVVDSKYGLKHLTEEKPDGLVNEATRQVALADMILINKTDLVSEEELNKLRTTIR 220
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + V + + +L + YD L I + + + A H
Sbjct: 221 SINGLGKVLETQRSRTHLSNILDLHAYDTLSGISLQKKLQHVSTAPH------------- 267
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
D ++ +VT G+ + + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 268 ----LDQSIVTVTFDVPGSAEEESLNVFIQNLLWEKNVKNKDGRCMEVIRLKGLVSIKDK 323
Query: 233 EQQYVFQGVHSTLDGCPGKA-WGPDEKRINKLVFIGRNLDETALRKGFKGCLA 284
QQ + QG+H + + W D +R +LVFIG+NLD+ L++ F +A
Sbjct: 324 PQQMIVQGIHELYELEESRVNWKDDAERACQLVFIGKNLDKDILQQLFITAVA 376
>sp|Q8IUF1|CBWD2_HUMAN COBW domain-containing protein 2 OS=Homo sapiens GN=CBWD2 PE=1 SV=1
Length = 395
Score = 157 bits (397), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 158/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLAEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRATIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV +GRNLD+ L++ F
Sbjct: 326 SQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLLGRNLDKDILKQLF 373
>sp|Q9BRT8|CBWD1_HUMAN COBW domain-containing protein 1 OS=Homo sapiens GN=CBWD1 PE=1 SV=1
Length = 395
Score = 157 bits (397), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 157/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ ++ + L +KK G+FD+I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDSGLRAIENLMQKK-GKFDYILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV +GRNLD+ L++ F
Sbjct: 326 SQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLLGRNLDKDILKQLF 373
>sp|Q5RIA9|CBWD5_HUMAN COBW domain-containing protein 5 OS=Homo sapiens GN=CBWD5 PE=2 SV=1
Length = 395
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 157/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDDILLETTGLADPGAVTSMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 326 SQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLIGRNLDKDILKQLF 373
>sp|Q5JTY5|CBWD3_HUMAN COBW domain-containing protein 3 OS=Homo sapiens GN=CBWD3 PE=2 SV=1
Length = 395
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 157/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDDILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L I+
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 326 SQQVIVQGVHELYDLEETP-VSWKDDTERTNRLVLIGRNLDKDILKQLF 373
>sp|Q4V339|CBWD6_HUMAN COBW domain-containing protein 6 OS=Homo sapiens GN=CBWD6 PE=2 SV=1
Length = 395
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 157/289 (54%), Gaps = 29/289 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+V+ + ++ + L +KK G+FD I++ETTGLA P V F D + +
Sbjct: 103 LRNGCLCCSVKDNGLRAIENLMQKK-GKFDDILLETTGLADPGAVASMFWVDAELGSDIY 161
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIK 121
LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV E ++ L ++
Sbjct: 162 LDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTLR 221
Query: 122 HINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHHHESAHGHHEGHH 180
IN + + + VD+ VL + +D L I + + H
Sbjct: 222 SINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL---------------QHVPGT 266
Query: 181 HNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDLYRMKGILSVSGS 232
H+ D ++ ++T G + ++ +++ L+ EK ++ R+KG++S+
Sbjct: 267 QPHL-DQSIVTITFDVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDK 325
Query: 233 EQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++ F
Sbjct: 326 SQQVIVQGVHELCDLEETP-VSWKDDTERTNRLVLIGRNLDKDILKQLF 373
>sp|P24203|YJIA_ECOLI Uncharacterized GTP-binding protein YjiA OS=Escherichia coli
(strain K12) GN=yjiA PE=1 SV=3
Length = 318
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAK---KKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQ 58
+ NGC+CC+ +L LL L K QFD +VIE TG+A P P+I+TF + E++ Q
Sbjct: 60 LTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQ 119
Query: 59 YVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTE 118
LDGVI LVD+ HA + +N+ F + A QV YADRI+L K D+ E E L E
Sbjct: 120 RYLLDGVIALVDAVHADEQMNQ----FTI--AQSQVGYADRILLTKTDVAGEAE--KLHE 171
Query: 119 RIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEG 178
R+ INA APV +G +D+ + G+ LE E+
Sbjct: 172 RLARINARAPVYTVTHGDIDLGLLFNTNGFMLE------------------ENVVSTKPR 213
Query: 179 HHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRMKGILSVSGSEQQYVF 238
H + +SS+ + + +D+ EV +E L+ E + L R KG+L + G + +F
Sbjct: 214 FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLF 273
Query: 239 QGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
QGV + WG DEK + +VFIG L E +R F G
Sbjct: 274 QGVQRLYSADWDRPWG-DEKPHSTMVFIGIQLPEEEIRAAFAG 315
>sp|O74310|YOG5_SCHPO COBW domain-containing protein C15D4.05 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC15D4.05 PE=3 SV=1
Length = 411
Score = 114 bits (286), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 149/288 (51%), Gaps = 29/288 (10%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
++NGC+CCTV+ + +K L ++ ++K G+FD+IVIETTG+A P P+ +TF D+ + VK
Sbjct: 123 LSNGCMCCTVKDNGIKALEKIMRQK-GRFDNIVIETTGIANPGPLAQTFWLDDALKSDVK 181
Query: 62 LDGVITLVDSKHAMQHL-NEVKPRFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERI 120
LDG++T++D K+ L +E F+ Q+++AD +ILNK DL++ L + + I
Sbjct: 182 LDGIVTVIDCKNIDNILKDESDIGFI------QISHADCLILNKTDLISSEALSVVRQTI 235
Query: 121 KHINAMAPVKLAKYGSV-DMDFVLGVGGY------DLERIDSEVHVDNSHCATHHH-ESA 172
IN +A + YG + D+ +L + Y +LE + N +C+T +
Sbjct: 236 LKINCLAKIIETTYGRLDDISEILDLDAYGNENTSNLEWSIQRSNDSNINCSTCLDVDCQ 295
Query: 173 HGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIE---EKGED----LYRMKG 225
H H H + ++S+ + W+ + E+GED +YR KG
Sbjct: 296 HLHSLDTHSLDISTHTFKLPPLMSKEV--FQQFLQWVRHTLWSCLEEGEDEEFMIYRSKG 353
Query: 226 ILSVSGSEQQYVFQGVHSTLDGCP--GKAWGPDEKRIN-KLVFIGRNL 270
I + Y+FQGV + P K EK I+ +++ IGRNL
Sbjct: 354 IFNKDDG-SWYIFQGVREVFEIMPLSEKPRAFLEKDIHPEIILIGRNL 400
>sp|A6NM15|CBWD7_HUMAN Putative COBW domain-containing protein 7 OS=Homo sapiens GN=CBWD7
PE=5 SV=3
Length = 247
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 28/241 (11%)
Query: 50 FCTDELVSQYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVT 109
F D + + LDG+IT+VDSK+ ++HL E KP ++NEA QVA AD I++NK DLV
Sbjct: 2 FWVDAELGSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVP 61
Query: 110 ETELGSLTERIKHINAMAPVKLAKYGSVDMDFVLGVGGYD-LERIDSEVHVDNSHCATHH 168
E ++ L I+ IN + + + VD+ VL + +D L I + +
Sbjct: 62 EEDVKKLRTTIRSINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKL--------- 112
Query: 169 HESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKG--------EDL 220
H H+ D ++ ++T G + ++ +++ L+ EK ++
Sbjct: 113 ------QHVPGTQPHL-DQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEV 165
Query: 221 YRMKGILSVSGSEQQYVFQGVHST--LDGCPGKAWGPDEKRINKLVFIGRNLDETALRKG 278
R+KG++S+ QQ + QGVH L+ P +W D +R N+LV IGRNLD+ L++
Sbjct: 166 IRLKGLVSIKDKSQQVIVQGVHELYDLEETPV-SWKDDTERTNRLVLIGRNLDKDILKQL 224
Query: 279 F 279
F
Sbjct: 225 F 225
>sp|P53729|YN8H_YEAST Uncharacterized protein YNR029C OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YNR029C PE=1 SV=1
Length = 429
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 152/304 (50%), Gaps = 29/304 (9%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGCLCC+++ VK + + ++ G+ D+I++ET+G+A PAP+ + F DE ++ V
Sbjct: 132 LGNGCLCCSLKNIGVKAIEDMVERSPGKIDYILLETSGIADPAPIAKMFWQDEGLNSSVY 191
Query: 62 LDGVITLVDSKHAMQHLNEV---------KPRFVVNEAVE--QVAYADRIILNKIDLVTE 110
+DG+IT++D +H ++ L+++ K N + Q+A ADRII+NK D +
Sbjct: 192 IDGIITVLDCEHILKCLDDISIDAHWHGDKVGLEGNLTIAHFQLAMADRIIMNKYDTIEH 251
Query: 111 TE--LGSLTERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCATHH 168
+ + L ER++ IN++AP+ KY + +L + YD RI S++ S T H
Sbjct: 252 SPEMVKQLKERVREINSIAPMFFTKYSDTPIQNLLDIHAYDSVRI-SDILDSGSGNGTIH 310
Query: 169 HESAHG--------HHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDL 220
+ +E ++N + + + G + + + E +
Sbjct: 311 DDRMGTIMLTFRPLKNEEEYNNKFIKQFLQPLLWKNFGAMTVLGGRRRDDGRDWE----V 366
Query: 221 YRMKGILSVSGSEQ-QYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGF 279
R KG++ + G V QGV T D PGK G +++ K+V IG+ L++ ++ +
Sbjct: 367 QRTKGLILIEGENPIARVIQGVRDTYDVFPGKYDGSNKE--CKIVLIGKYLEKESIEELL 424
Query: 280 KGCL 283
+ L
Sbjct: 425 RKTL 428
>sp|P29937|COBW_PSEDE Protein CobW OS=Pseudomonas denitrificans GN=cobW PE=3 SV=3
Length = 354
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 139/300 (46%), Gaps = 44/300 (14%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ NGC+CCTV D + + +L ++ + + DHI+IET+GLA P P+I F ++ S+
Sbjct: 73 LTNGCICCTVADDFIPTMTKLLER-ENRPDHIIIETSGLALPQPLIAAFNWPDIRSEVTV 131
Query: 62 L--------------------DGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRII 101
D V L + H + ++ F +Q+ AD I+
Sbjct: 132 DGVVTVVDSAAVAAGRFADDHDKVDALRVEDDNLDHESPIEELFE-----DQLTAADLIV 186
Query: 102 LNKIDLVTETELGSLTERIKHINAMAPVKL-AKYGSVDMDFVLGVGGYDLERIDSEVHVD 160
LNK DL+ + L ++ + + + P + AK G V +LG+G + +E +
Sbjct: 187 LNKTDLIDASGLKAVRDEVSSRTSRKPTMIEAKNGEVAAAILLGLG------VGTESDIA 240
Query: 161 NSHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDL 220
N HHE H E H H+ DS V + +++ +D L+ +I E D+
Sbjct: 241 NRKS---HHEMEHEAGEEHDHDEF-DSFVVELGSIADPAAFIDR----LKGVIAE--HDV 290
Query: 221 YRMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIG-RNLDETALRKGF 279
R+KG V G + + Q V + +D +AWG EKR +LV IG ++DE A+R
Sbjct: 291 LRLKGFADVPGKPMRLLIQAVGARIDQYYDRAWGAGEKRGTRLVVIGLHDMDEAAVRAAI 350
>sp|P94400|YCIC_BACSU Putative metal chaperone YciC OS=Bacillus subtilis (strain 168)
GN=yciC PE=2 SV=1
Length = 397
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 148/325 (45%), Gaps = 59/325 (18%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFC--TDEL---V 56
++NGC+CCT+R DL+ + +LAK G+FD+IVIE+TG+++P PV +TF +E+ +
Sbjct: 66 MSNGCICCTLREDLLIEVEKLAK--DGRFDYIVIESTGISEPIPVAQTFSYIDEEMGIDL 123
Query: 57 SQYVKLDGVITLVDSKHAM-------------QHLNEVKPRFVVNEAVEQVAYADRIILN 103
+++ +LD ++T+VD+ + L E R + + ++Q+ + D +ILN
Sbjct: 124 TKFCQLDTMVTVVDANRFWHDYQSGESLLDRKEALGEKDEREIADLLIDQIEFCDVLILN 183
Query: 104 KIDLVTETELGSLTERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSH 163
K DLV+E EL L ++ + A + G+V +L G ++ E + S
Sbjct: 184 KCDLVSEQELEQLENVLRKLQPRARFIRSVKGNVKPQEILHTGLFNFE--------EASG 235
Query: 164 CATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGEDLYRM 223
A E GH E H + +SS WL+++ +++ R
Sbjct: 236 SAGWIQELTAGHAE--HTPETEEYGISSFVYKRRLPFHSTRFYRWLDQM----PKNVVRA 289
Query: 224 KGI----------LSVSGSEQQYVFQGVHSTLDGCPG--------------KAWGPD-EK 258
KGI L +S + + V + P + W P+
Sbjct: 290 KGIVWCASHNNLALLMSQAGPSVTIEPVSYWVAALPKLEQEQVKQQEPEILEEWDPEFGD 349
Query: 259 RINKLVFIGRNLDETALRKGFKGCL 283
R+ +LVFIG +LDE + K CL
Sbjct: 350 RLTQLVFIGTDLDEETITKELDQCL 374
>sp|Q9HZQ2|COBW_PSEAE Protein CobW OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 /
1C / PRS 101 / LMG 12228) GN=cobW PE=3 SV=1
Length = 375
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 133/303 (43%), Gaps = 48/303 (15%)
Query: 4 NGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLD 63
NGCLCCTV+ + ++ +L ++ G D I+IET+GLA P P+++ F E + +D
Sbjct: 99 NGCLCCTVQEEFFPVMRELVARR-GDLDQILIETSGLALPKPLVQAFQWPE-IRNACTVD 156
Query: 64 GVITLVDSKHAMQHLNEVKPRFV---------------VNEAVE-QVAYADRIILNKIDL 107
VIT+VDS P V ++E E Q+A AD +ILNK D
Sbjct: 157 AVITVVDSPAVAAGTFAAHPEQVDQQRRQDPNLDHESPLHELFEDQLASADLVILNKADQ 216
Query: 108 VTETELGSLTERIK-HINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHCAT 166
+ L + I + A + A G + + +LG+ ++E+H+D
Sbjct: 217 LDAEALARVRAEIAGELPAAVKIVEASRGELPLPVLLGLNA------EAELHIDGRPTHH 270
Query: 167 HHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLERLIEEKGE-----DLY 221
H H+ H+ DL EV++ L+E GE D+
Sbjct: 271 DHEGHEDHDHDEFDSFHV----------------DLPEVEE--AALLEALGELVERHDIL 312
Query: 222 RMKGILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRINKLVFIGRNLDETALRKGFKG 281
R+KG ++ G + + QGV D + W DE R +LV IG+ LD+ A+ +
Sbjct: 313 RIKGFAAIPGKPMRLLVQGVGKRFDRHFDRKWLADEARSTRLVVIGQELDQAAIANQLRT 372
Query: 282 CLA 284
LA
Sbjct: 373 ALA 375
>sp|Q869Q0|Y4527_DICDI COBW domain-containing protein DDB_G0274527 OS=Dictyostelium
discoideum GN=DDB_G0274527 PE=3 SV=1
Length = 475
Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 98/169 (57%), Gaps = 20/169 (11%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTD-----ELV 56
++NGC+CCT+R DL+ + +LAK+K+ FD+++IE++G+++P P+ ETF + E +
Sbjct: 112 MSNGCICCTMREDLLVEVTKLAKEKR--FDYLIIESSGISEPLPIAETFTFEIDGSIENL 169
Query: 57 SQYVKLDGVITLVDSKHAMQHL-------------NEVKPRFVVNEAVEQVAYADRIILN 103
Y KLD ++T+VD ++ + R +V+ ++QV +++ I+LN
Sbjct: 170 KDYTKLDTMVTVVDCSTWLEQYQSGESLKDKDMQATDQDERSLVDLLLDQVEFSNVILLN 229
Query: 104 KIDLVTETELGSLTERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLER 152
K DLV+E + ++ IKHIN A + + V + +L G +D ++
Sbjct: 230 KCDLVSEERVKTIEGLIKHINPEARLLRSTNSVVPLKEILNTGLFDFKK 278
>sp|P31521|P47K_PSECL 47 kDa protein OS=Pseudomonas chlororaphis PE=3 SV=1
Length = 419
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 58/324 (17%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDEL----VS 57
++NGC+CCT+R DL++ + LA+ Q +FD+++IE+TG+++P PV ETF + +S
Sbjct: 72 MSNGCICCTLRADLLEQISDLAR--QQRFDYLLIESTGISEPMPVAETFAFLDTEGFSLS 129
Query: 58 QYVKLDGVITLVDSKHAMQHLNE-------------VKPRFVVNEAVEQVAYADRIILNK 104
+ +LD ++T+VD Q L E R + + +EQV YA+ I++NK
Sbjct: 130 ELARLDTLVTVVDGSQ-FQALLESTDTVARADTEAHTSTRHLADLLIEQVEYANVILVNK 188
Query: 105 IDLVTETELGSLTERIKHINAMAPVKLAKYGSVDMDFVLGVGGYDLERIDSEVHVDNSHC 164
DL+ E ++ + +N A + +G+V + +L +DL + +
Sbjct: 189 RDLIDEPGYQAVHAILAGLNPSARIMPMAHGNVALSSLLDTHLFDLPSLAASPGWMRKME 248
Query: 165 ATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEGTLDLDEVDDWLE------RLIEEKGE 218
AT S + V+S + ++L+ RL+ KG
Sbjct: 249 ATDTPASESDTY-----------GVTSWVYRERAPFHPQRLLEFLQKPWHNGRLLRSKGY 297
Query: 219 DLYRMK----GILSVSGSEQQYVFQGVHSTLDGCPGKAWGPDEKRI-------------- 260
+ G+L+ SG + Q+ + G + W DE R+
Sbjct: 298 FWLASRHLEIGLLAQSGKQFQWDYVG--RWWNFIEPSQWPRDEYRLQGIMAKWDSVVGDC 355
Query: 261 -NKLVFIGRNLDETALRKGFKGCL 283
+LVFIG+ LD L++ CL
Sbjct: 356 RQELVFIGQGLDTRVLQRELDHCL 379
>sp|P33030|YEIR_ECOLI Uncharacterized protein YeiR OS=Escherichia coli (strain K12)
GN=yeiR PE=3 SV=2
Length = 328
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 2 VNNGCLCCTVRGDLVKMLLQLAKKKQGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVK 61
+ GC+CC V G +++ L +QG+ D ++IE TGL P +++ T + ++
Sbjct: 59 IPGGCMCC-VNGLPMQVGLN-TLLRQGKPDRLLIEPTGLGHPKQILD-LLTAPVYEPWID 115
Query: 62 LDGVITLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVT 109
L + ++D + + + F +Q+A AD I+ NK D T
Sbjct: 116 LRATLCILDPRLLLDEKSASNENF-----RDQLAAADIIVANKSDRTT 158
>sp|Q87LH9|Y2633_VIBPA UPF0249 protein VP2633 OS=Vibrio parahaemolyticus serotype O3:K6
(strain RIMD 2210633) GN=VP2633 PE=3 SV=1
Length = 251
Score = 36.2 bits (82), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 33 IVIETTGLAKPAPVIETFCTDELVSQYVKLDGVITLVDSKHAMQHLNEVKPRFVVNEAVE 92
+ + +G+ F TDE Q V LDG+ MQHL +K + V E +
Sbjct: 144 VPLRGSGICHQPMTTSYFFTDEFYDQKVSLDGL---------MQHLLSLKENYDVVEVMC 194
Query: 93 QVAYADRIILNK--IDLVTETELGSLTERI 120
AYAD+ ++ K L E EL LT I
Sbjct: 195 HPAYADQPLIMKSGYALQRELELQVLTSPI 224
>sp|B3WEL1|ERA_LACCB GTPase Era OS=Lactobacillus casei (strain BL23) GN=era PE=3 SV=1
Length = 300
Score = 35.0 bits (79), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 23/106 (21%)
Query: 33 IVIETTGLAKPAPVIETFCTDELVSQYVKLDGVITLVDSK--------HAMQHLNEVK-P 83
+ ++T G+ KP ++T+ +S ++D ++ +V++ + M+ L EVK P
Sbjct: 57 VFVDTPGIHKPKNELDTYMDKAALSTLNQVDAILFMVEADEEKGPGDGYIMRQLAEVKKP 116
Query: 84 RFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIKHINAMAPV 129
+ +I+NKIDLV +L L E +H A A V
Sbjct: 117 VY--------------LIINKIDLVKPDDLLPLIESYQHDYAFAQV 148
>sp|Q038T2|ERA_LACC3 GTPase Era OS=Lactobacillus casei (strain ATCC 334) GN=era PE=3
SV=1
Length = 300
Score = 35.0 bits (79), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 23/106 (21%)
Query: 33 IVIETTGLAKPAPVIETFCTDELVSQYVKLDGVITLVDSK--------HAMQHLNEVK-P 83
+ ++T G+ KP ++T+ +S ++D ++ +V++ + M+ L EVK P
Sbjct: 57 VFVDTPGIHKPKNELDTYMDKAALSTLNQVDAILFMVEADEEKGPGDGYIMRQLAEVKKP 116
Query: 84 RFVVNEAVEQVAYADRIILNKIDLVTETELGSLTERIKHINAMAPV 129
+ +I+NKIDLV +L L E +H A A V
Sbjct: 117 VY--------------LIINKIDLVKPDDLLPLIESYQHDYAFAQV 148
>sp|B7IH25|ERA_THEAB GTPase Era OS=Thermosipho africanus (strain TCF52B) GN=era PE=3
SV=1
Length = 299
Score = 34.7 bits (78), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 30 FDHIVIETTGLAKPAPVIETFCTDELVSQYVKLDGVITLVDSKHAMQHLNEVKPRFVVNE 89
F I ++T G+ KP + + VS +D ++T+VD+K + KP V +
Sbjct: 51 FQIIFVDTPGIHKPLYRLGEYMVKAAVSALKGVDLILTVVDAKEGVG-----KPERFVFD 105
Query: 90 AVEQVAYADRIILNKIDLVTETELGSLTERIKH 122
V Q ++NKIDLV ++ + IK+
Sbjct: 106 YVNQSKTKTIGVINKIDLVDAKKVEQIYNEIKN 138
>sp|Q1IXB4|ERA_DEIGD GTPase Era OS=Deinococcus geothermalis (strain DSM 11300) GN=era
PE=3 SV=1
Length = 309
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
Query: 33 IVIETTGLAKPAPVIETFCTDELVSQYVKLDGVITLVDSKHAMQHLNEV---------KP 83
+ ++T GL KP + + E+ S +D ++ +VD +H +E+ KP
Sbjct: 68 VFVDTPGLHKPKDALGKYMNQEVQSALADVDAILWVVDLRHPPTEEDELVARQVRDLPKP 127
Query: 84 RFVVNEAVEQVAYAD 98
F++ V+ Y D
Sbjct: 128 LFLIGNKVDAAKYPD 142
>sp|A5UJM9|IF2P_METS3 Probable translation initiation factor IF-2 OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=infB PE=3
SV=1
Length = 596
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 92/208 (44%), Gaps = 38/208 (18%)
Query: 31 DHIVIETTGLAKPAPVIETFCTDELVSQYVKLDGVITLVDSKHAMQHLNEV---KPRFVV 87
D +V + + +P P+ E + + ++ KLD V+ K A HL++V P V+
Sbjct: 272 DVLVTKIRSILRPLPLEEMRDSKK---KFRKLDEVVAAAGIKVAAPHLDDVVSGSPLRVL 328
Query: 88 NEAVEQVAYADRIILNKIDLVT-ETE----------LGSLTERIKHINAM-APVKLAKYG 135
+E + ++ ILN+ID +T +TE +GSL +K + M P++ A G
Sbjct: 329 SEDTD----VEQEILNEIDNITIDTEDEGILVKADTIGSLEAVVKLLREMDIPIRAADIG 384
Query: 136 SVDMDFVLGVGGYDLERIDSEVHVDNSHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIV 195
V+ + I+S + D + H + + H N D S V +
Sbjct: 385 DVNRRDI----------INSSIAYDENEL----HGAIIAFNVDVHPNSEEDLNNSEVKLF 430
Query: 196 SEGTLD--LDEVDDWLERLIEEKGEDLY 221
S + L+E ++W+++ E+K + Y
Sbjct: 431 SGDVIYQILEEYEEWVKQKQEDKKKSFY 458
>sp|Q5HAY9|ERA_EHRRW GTPase Era OS=Ehrlichia ruminantium (strain Welgevonden) GN=era
PE=3 SV=1
Length = 296
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 33 IVIETTGLAKPAPVIETFCTDELVSQYVKLDGVITLVDSKHAM-QHLNEVKPRFVVNEAV 91
I I+T G+ P +E F ++ VI LVD K+ + QHL ++ R +
Sbjct: 59 IFIDTPGIFSPKTKLEKFLVKHAWMSLKGIENVIVLVDVKNYLNQHLKKIIDR------I 112
Query: 92 EQVAYADRIILNKIDLVTETELGSLTE 118
+ ++LNKID+V ++ + + E
Sbjct: 113 KHSNLNAILVLNKIDIVHQSIVSEVIE 139
>sp|Q5FFN4|ERA_EHRRG GTPase Era OS=Ehrlichia ruminantium (strain Gardel) GN=era PE=3
SV=1
Length = 296
Score = 32.3 bits (72), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 33 IVIETTGLAKPAPVIETFCTDELVSQYVKLDGVITLVDSKHAM-QHLNEVKPRFVVNEAV 91
I I+T G+ P +E F ++ VI LVD K+ + QHL ++ R +
Sbjct: 59 IFIDTPGIFSPKTKLEKFLVKHAWMSLKGIENVIVLVDVKNYLNQHLKKIIDR------I 112
Query: 92 EQVAYADRIILNKIDLVTETELGSLTE 118
+ ++LNKID+V ++ + + E
Sbjct: 113 KHSNLNAILVLNKIDIVHQSIVSEVIE 139
>sp|A6LL68|ERA_THEM4 GTPase Era OS=Thermosipho melanesiensis (strain BI429 / DSM 12029)
GN=era PE=3 SV=1
Length = 299
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 30 FDHIVIETTGLAKPAPVIETFCTDELVSQYVKLDGVITLVDSKHAMQHLNEVKPRFVVNE 89
F I ++T G+ KP + + VS +D ++T++D+K + KP V +
Sbjct: 51 FQVIFVDTPGIHKPLYRLGEYMVKAAVSALKGVDLILTVIDAKEGIG-----KPEAFVFD 105
Query: 90 AVEQVAYADRIILNKIDLVTETELGSL 116
V Q ++NKIDLV ++ +L
Sbjct: 106 YVNQSNTKTIGVINKIDLVGTEKVETL 132
>sp|A4YWC7|ERA_BRASO GTPase Era OS=Bradyrhizobium sp. (strain ORS278) GN=era PE=3 SV=1
Length = 307
Score = 31.2 bits (69), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 79/193 (40%), Gaps = 30/193 (15%)
Query: 27 QGQFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLDGVITLVDSKHAMQHLNEVKPRFV 86
+GQ I+++T G+ P ++ S D V L+D+K + + + +
Sbjct: 59 EGQSQIILVDTPGIFSPKRRLDRAMVTTAWSGAHDADLVCVLLDAKKGLDD----EAQAI 114
Query: 87 VNEAVEQVAYADRIILNKIDLVTETELGSLTERIKHINAMAPVKLAKYGSVDMDFVLGVG 146
+++A VA+ +++NK+DLV +L +L A A KLA + + + G G
Sbjct: 115 IDKAA-SVAHEKILVVNKVDLVPREKLLALV-------AAANEKLAFARTFMISALSGDG 166
Query: 147 GYDLERIDSEV--------HVDNSHCATHHHESAHGHHEGHHHNHMHDSAVSSVTIVSEG 198
DL R +E+ D A H +A E ++H+H T+
Sbjct: 167 VDDLRRALAEMVPPGPFHYPEDQMSDAPMRHLAAEITRE-KIYSHLHQELPYQSTV---- 221
Query: 199 TLDLDEVDDWLER 211
E D W ER
Sbjct: 222 -----ETDSWTER 229
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,743,485
Number of Sequences: 539616
Number of extensions: 4550892
Number of successful extensions: 24875
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 138
Number of HSP's that attempted gapping in prelim test: 20306
Number of HSP's gapped (non-prelim): 2571
length of query: 284
length of database: 191,569,459
effective HSP length: 116
effective length of query: 168
effective length of database: 128,974,003
effective search space: 21667632504
effective search space used: 21667632504
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)