BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023302
(284 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93Y38|GDT13_ARATH GDT1-like protein 3 OS=Arabidopsis thaliana GN=At5g36290 PE=2 SV=1
Length = 293
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/294 (75%), Positives = 252/294 (85%), Gaps = 11/294 (3%)
Query: 1 MGLVSNPVRFLFVALSIFSALSAISAQDVLFESDNEDPSR-SAKDLGRRGLILSQDLE-- 57
MGL+SNP R + VA +IF +S+IS QD + E++ S S K+LGRRG++ ++ +
Sbjct: 1 MGLISNPTRLILVA-TIFFLVSSISGQDSVVENNERQESEGSGKELGRRGMVGTERIGVD 59
Query: 58 ---NELGTIPLNID---SGLGVFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLS 111
+ +G + LN+D + VFDA +SFSMI+V+EIGDETFIIAALMAMRHPK+TVLS
Sbjct: 60 TVVDNIGALGLNLDLDATAPSVFDALFSSFSMILVTEIGDETFIIAALMAMRHPKATVLS 119
Query: 112 GALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWMS-DPKSGQKK 170
GALSALFVMT+LSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAW S D KS QKK
Sbjct: 120 GALSALFVMTILSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSTDSKSNQKK 179
Query: 171 EMEEVEEKLESGQGKTTFRRFFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAV 230
EMEEVEEKLESGQGKT FRR FSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNA+
Sbjct: 180 EMEEVEEKLESGQGKTPFRRLFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAI 239
Query: 231 GVAVGATIGHTICTSLAVVGGSMLASKISQRTVATIGGLLFLCFSLSSYFYPPL 284
GVA+GA+IGHT+CTSLAVVGGSMLAS+ISQRTVAT+GGLLFL FS+SSYFYPPL
Sbjct: 240 GVAIGASIGHTVCTSLAVVGGSMLASRISQRTVATVGGLLFLGFSVSSYFYPPL 293
>sp|Q6ZIB9|GDT14_ORYSJ GDT1-like protein 4 OS=Oryza sativa subsp. japonica GN=Os08g0528500
PE=2 SV=1
Length = 282
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/257 (80%), Positives = 220/257 (85%), Gaps = 8/257 (3%)
Query: 34 DNEDPSRSAKDLG------RRGLILSQDLENELGTIPLNIDSGLGVFDAFIASFSMIIVS 87
D EDP R D G R + L ++ G + +GLG+FDAF AS SMI+VS
Sbjct: 28 DQEDP-RGGGDNGTARLDRRTKMFLHAARASDGGATGME-KAGLGLFDAFFASLSMILVS 85
Query: 88 EIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVL 147
EIGDETFIIAALMAMRHPKSTVLSGALSAL VMT+LSTGLGRIVPNLISRKHTNSAATVL
Sbjct: 86 EIGDETFIIAALMAMRHPKSTVLSGALSALVVMTILSTGLGRIVPNLISRKHTNSAATVL 145
Query: 148 YAFFGLRLLYIAWMSDPKSGQKKEMEEVEEKLESGQGKTTFRRFFSRFCTPIFLESFILT 207
YAFFGLRLLYIAW SD K+ QKKE+EEVEEKLE+GQGK+TFRR FSRFCTPIFLESF+LT
Sbjct: 146 YAFFGLRLLYIAWRSDSKASQKKEIEEVEEKLEAGQGKSTFRRIFSRFCTPIFLESFVLT 205
Query: 208 FLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKISQRTVATIG 267
FLAEWGDRSQIATIALATHKNAVGVAVGAT+GHTICTS AVVGGSMLASKISQ TVATIG
Sbjct: 206 FLAEWGDRSQIATIALATHKNAVGVAVGATLGHTICTSFAVVGGSMLASKISQGTVATIG 265
Query: 268 GLLFLCFSLSSYFYPPL 284
GLLFL FSLSSYFYPPL
Sbjct: 266 GLLFLGFSLSSYFYPPL 282
>sp|A2YXC7|GDT14_ORYSI GDT1-like protein 4 OS=Oryza sativa subsp. indica GN=OsI_29993 PE=3
SV=1
Length = 281
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/257 (80%), Positives = 220/257 (85%), Gaps = 8/257 (3%)
Query: 34 DNEDPSRSAKDLG------RRGLILSQDLENELGTIPLNIDSGLGVFDAFIASFSMIIVS 87
D EDP R D G R + L ++ G + +GLG+FDAF AS SMI+VS
Sbjct: 27 DQEDP-RGGGDNGTARLDRRTKMFLHAARASDGGATGME-KAGLGLFDAFFASLSMILVS 84
Query: 88 EIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVL 147
EIGDETFIIAALMAMRHPKSTVLSGALSAL VMT+LSTGLGRIVPNLISRKHTNSAATVL
Sbjct: 85 EIGDETFIIAALMAMRHPKSTVLSGALSALVVMTILSTGLGRIVPNLISRKHTNSAATVL 144
Query: 148 YAFFGLRLLYIAWMSDPKSGQKKEMEEVEEKLESGQGKTTFRRFFSRFCTPIFLESFILT 207
YAFFGLRLLYIAW SD K+ QKKE+EEVEEKLE+GQGK+TFRR FSRFCTPIFLESF+LT
Sbjct: 145 YAFFGLRLLYIAWRSDSKASQKKEIEEVEEKLEAGQGKSTFRRIFSRFCTPIFLESFVLT 204
Query: 208 FLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKISQRTVATIG 267
FLAEWGDRSQIATIALATHKNAVGVAVGAT+GHTICTS AVVGGSMLASKISQ TVATIG
Sbjct: 205 FLAEWGDRSQIATIALATHKNAVGVAVGATLGHTICTSFAVVGGSMLASKISQGTVATIG 264
Query: 268 GLLFLCFSLSSYFYPPL 284
GLLFL FSLSSYFYPPL
Sbjct: 265 GLLFLGFSLSSYFYPPL 281
>sp|Q2R4J1|GDT13_ORYSJ GDT1-like protein 3 OS=Oryza sativa subsp. japonica GN=Os11g0472500
PE=2 SV=1
Length = 279
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/283 (73%), Positives = 228/283 (80%), Gaps = 11/283 (3%)
Query: 6 NPVRFLFVALSIFSALSAISAQDVLFESDNEDPSRSAKDLGRRGLILSQDLENEL---GT 62
NP + + L FSA A++ D E S LGRR L+ E G
Sbjct: 4 NPRLLILLVLLAFSATVAVA-------EDGESTGGSKVSLGRRAGGFLHGLKKEAVVEGD 56
Query: 63 IPLNIDS-GLGVFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMT 121
+ +D G G+FDA AS SMI+VSEIGDETFIIAALMAMRHPKS VLSGALSAL+VMT
Sbjct: 57 HGVALDEVGPGLFDALFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALYVMT 116
Query: 122 VLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWMSDPKSGQKKEMEEVEEKLES 181
VLSTGLGRIVPNLISRKHTNSAATVLY FFGLRLLYIAW SDPK QKKEMEEVEEKLES
Sbjct: 117 VLSTGLGRIVPNLISRKHTNSAATVLYLFFGLRLLYIAWKSDPKGSQKKEMEEVEEKLES 176
Query: 182 GQGKTTFRRFFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHT 241
GQGK+T RRFF RFCTPIFLE+FILTFLAEWGDRSQIATIALATHKNA+GVAVGA++GHT
Sbjct: 177 GQGKSTLRRFFGRFCTPIFLEAFILTFLAEWGDRSQIATIALATHKNAIGVAVGASLGHT 236
Query: 242 ICTSLAVVGGSMLASKISQRTVATIGGLLFLCFSLSSYFYPPL 284
+CTSLAV+GGSMLASKISQRTVATIGG+LFL FS+SSYFYPPL
Sbjct: 237 VCTSLAVIGGSMLASKISQRTVATIGGVLFLGFSVSSYFYPPL 279
>sp|A2ZE50|GDT13_ORYSI GDT1-like protein 3 OS=Oryza sativa subsp. indica GN=OsI_36063 PE=3
SV=1
Length = 279
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/283 (73%), Positives = 228/283 (80%), Gaps = 11/283 (3%)
Query: 6 NPVRFLFVALSIFSALSAISAQDVLFESDNEDPSRSAKDLGRRGLILSQDLENEL---GT 62
NP + + L FSA A++ D E S LGRR L+ E G
Sbjct: 4 NPRLLILLVLLAFSATVAVA-------EDGESTGGSKVSLGRRAGGFLHGLKKEAVVEGD 56
Query: 63 IPLNIDS-GLGVFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMT 121
+ +D G G+FDA AS SMI+VSEIGDETFIIAALMAMRHPKS VLSGALSAL+VMT
Sbjct: 57 HGVALDEVGPGLFDALFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALYVMT 116
Query: 122 VLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWMSDPKSGQKKEMEEVEEKLES 181
VLSTGLGRIVPNLISRKHTNSAATVLY FFGLRLLYIAW SDPK QKKEMEEVEEKLES
Sbjct: 117 VLSTGLGRIVPNLISRKHTNSAATVLYLFFGLRLLYIAWKSDPKGSQKKEMEEVEEKLES 176
Query: 182 GQGKTTFRRFFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHT 241
GQGK+T RRFF RFCTPIFLE+FILTFLAEWGDRSQIATIALATHKNA+GVAVGA++GHT
Sbjct: 177 GQGKSTLRRFFGRFCTPIFLEAFILTFLAEWGDRSQIATIALATHKNAIGVAVGASLGHT 236
Query: 242 ICTSLAVVGGSMLASKISQRTVATIGGLLFLCFSLSSYFYPPL 284
+CTSLAV+GGSMLASKISQRTVATIGG+LFL FS+SSYFYPPL
Sbjct: 237 VCTSLAVIGGSMLASKISQRTVATIGGVLFLGFSVSSYFYPPL 279
>sp|Q9HC07|TM165_HUMAN Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1
Length = 324
Score = 194 bits (494), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 108/235 (45%), Positives = 149/235 (63%), Gaps = 21/235 (8%)
Query: 68 DSGLGVFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGL 127
+ LG AF+A+ S+IIVSE+GD+TF IAA+MAMR+ + TVL+GA+ AL +MT LS
Sbjct: 88 QTNLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLF 147
Query: 128 GRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWMSDPKSGQKKEMEEVEEKL-------- 179
G +I R +T +TVL+A FG+R+L P GQ+ E+EEV+ +L
Sbjct: 148 GYAT-TVIPRVYTYYVSTVLFAIFGIRMLREGLKMSPDEGQE-ELEEVQAELKKKDEEFQ 205
Query: 180 -----------ESGQGKTTFRRFFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKN 228
E+G T ++ + F +PIF+++ LTFLAEWGDRSQ+ TI LA ++
Sbjct: 206 RTKLLNGPGDVETGTSITVPQKKWLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAARED 265
Query: 229 AVGVAVGATIGHTICTSLAVVGGSMLASKISQRTVATIGGLLFLCFSLSSYFYPP 283
GVAVG T+GH +CT LAV+GG M+A KIS RTV IGG++FL F+ S+ F P
Sbjct: 266 PYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFISP 320
>sp|P52875|TM165_MOUSE Transmembrane protein 165 OS=Mus musculus GN=Tmem165 PE=2 SV=2
Length = 323
Score = 178 bits (452), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 147/234 (62%), Gaps = 20/234 (8%)
Query: 68 DSGLGVFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGL 127
+ LG AF+A+ S+IIVSE+GD+TF IAA+MAMR+ + TVL+GA+ AL +MT LS
Sbjct: 88 QTNLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLF 147
Query: 128 GRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWMSDPKSGQKKEMEEVEEKL-------- 179
G +I R +T +T L+A FG+R+L P GQ+ E+EEV+ +L
Sbjct: 148 GYAT-TVIPRVYTYYVSTALFAIFGIRMLREGLKMSPDEGQE-ELEEVQAELKKKDEEFQ 205
Query: 180 ----------ESGQGKTTFRRFFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNA 229
E+G ++ + F +PIF+++ LTFLAEWGDRSQ+ TI LA ++
Sbjct: 206 RTKLLNGPDVETGTSTAIPQKKWLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDP 265
Query: 230 VGVAVGATIGHTICTSLAVVGGSMLASKISQRTVATIGGLLFLCFSLSSYFYPP 283
GVAVG T+GH +CT LAV+GG M+A KIS RTV IGG++FL F+ S+ F P
Sbjct: 266 YGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFISP 319
>sp|Q4V899|TM165_RAT Transmembrane protein 165 OS=Rattus norvegicus GN=Tmem165 PE=2 SV=1
Length = 323
Score = 178 bits (451), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 147/234 (62%), Gaps = 20/234 (8%)
Query: 68 DSGLGVFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGL 127
+ LG AF+A+ S+IIVSE+GD+TF IAA+MAMR+ + TVL+GA+ AL +MT LS
Sbjct: 88 QANLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLF 147
Query: 128 GRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWMSDPKSGQKKEMEEVEEKL-------- 179
G +I R +T +T L+A FG+R+L P GQ+ E+EEV+ +L
Sbjct: 148 GYAT-TVIPRVYTYYVSTALFAIFGIRMLREGLKMSPDEGQE-ELEEVQAELKKKDEEFQ 205
Query: 180 ----------ESGQGKTTFRRFFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNA 229
E+G ++ + F +PIF+++ LTFLAEWGDRSQ+ TI LA ++
Sbjct: 206 RTKLLNGPDVETGTSTAIPQKKWLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDP 265
Query: 230 VGVAVGATIGHTICTSLAVVGGSMLASKISQRTVATIGGLLFLCFSLSSYFYPP 283
GVAVG T+GH +CT LAV+GG M+A KIS RTV IGG++FL F+ S+ F P
Sbjct: 266 YGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFISP 319
>sp|Q9C6M1|GDT14_ARATH GDT1-like protein 4 OS=Arabidopsis thaliana GN=At1g25520 PE=2 SV=1
Length = 230
Score = 174 bits (441), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 96/224 (42%), Positives = 134/224 (59%), Gaps = 20/224 (8%)
Query: 73 VFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVP 132
V F S +M VSEIGD+TF AA++AMR+P+ VL+G LSAL VMT+LS LG P
Sbjct: 4 VLQGFTKSLAMTFVSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGWAAP 63
Query: 133 NLISRKHTNSAATVLYAFFGLRLLYIAWM-----------------SDPKSGQKKEMEEV 175
NLISRK T+ T+L+ FGL L+ + +D K+ K +
Sbjct: 64 NLISRKWTHHITTLLFFGFGLWSLWDGFKEGGGGSEELAEVEAELDADLKANGKSPKDSS 123
Query: 176 EEKLESGQGKTTFRRFFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVG 235
+ + E+ K R F ++F +PIFL++F + F EWGD+SQ+ATI LA +N GV +G
Sbjct: 124 KREDEN---KKQNRAFLTQFFSPIFLKAFSINFFGEWGDKSQLATIGLAADENPFGVVLG 180
Query: 236 ATIGHTICTSLAVVGGSMLASKISQRTVATIGGLLFLCFSLSSY 279
+ +CT+ AV+GG LAS+IS+R VA GG+LF+ F + SY
Sbjct: 181 GVVAQFLCTTAAVIGGKSLASQISERIVALSGGMLFIIFGIQSY 224
>sp|Q9SX28|GDT15_ARATH GDT1-like protein 5 OS=Arabidopsis thaliana GN=At1g68650 PE=2 SV=1
Length = 228
Score = 174 bits (441), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 96/223 (43%), Positives = 132/223 (59%), Gaps = 14/223 (6%)
Query: 73 VFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVP 132
+ F S +M +SEIGD+TF AA++AMR+P+ VL+G LSAL VMT+LS LG P
Sbjct: 4 LLQGFTKSLAMTFLSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGWAAP 63
Query: 133 NLISRKHTNSAATVLYAFFGLRLLYIAWMSDPKSG-------------QKKEMEEVEEKL 179
NLISRK T+ T L+ FGL L+ + S +K + K+
Sbjct: 64 NLISRKWTHHITTFLFFGFGLWSLWDGFKEGGGSEELAEVEAELDSDLKKTNDQSKNSKI 123
Query: 180 ESGQGKTTFRRFFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIG 239
E Q K R F + F +PIFL++F + F EWGD+SQ+ATI LA +N +GV +G +
Sbjct: 124 EDEQKKQK-RPFLTAFFSPIFLKAFSINFFGEWGDKSQLATIGLAADENPLGVVLGGIVA 182
Query: 240 HTICTSLAVVGGSMLASKISQRTVATIGGLLFLCFSLSSYFYP 282
T+CT+ AV+GG LAS+IS+R VA GG+LF+ F + S P
Sbjct: 183 QTLCTTAAVLGGKSLASQISERIVALSGGMLFIIFGIQSLLTP 225
>sp|B9G125|GDT15_ORYSJ GDT1-like protein 5 OS=Oryza sativa subsp. japonica GN=Os08g0433100
PE=2 SV=1
Length = 232
Score = 169 bits (429), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/221 (41%), Positives = 133/221 (60%), Gaps = 13/221 (5%)
Query: 76 AFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLI 135
F S +M ++SEIGD+TF AA++AMR+P+ VL+G L++L VMT LS LG + PNLI
Sbjct: 8 GFTKSLAMTVLSEIGDKTFFAAAILAMRYPRKLVLAGCLTSLTVMTALSVSLGWVAPNLI 67
Query: 136 SRKHTNSAATVLYAFFGLRLLYIAWMSDPKSGQ------------KKEMEEVEEKLESGQ 183
SRK T+ T+L+ FG+ L+ + D S + K E + K ++
Sbjct: 68 SRKWTHHVTTLLFFVFGILSLWEGFKEDGDSEELAEVEAELDANFKSNKAESKSKSKAND 127
Query: 184 GKTTFRR-FFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTI 242
K +R F +F +PIF+++F +TF EWGD+SQIATI LA +N GV +G + +
Sbjct: 128 DKKKQQRPFVLQFFSPIFIKAFSITFFGEWGDKSQIATIGLAADENPFGVVLGGVLAQAL 187
Query: 243 CTSLAVVGGSMLASKISQRTVATIGGLLFLCFSLSSYFYPP 283
CT+ AV+GG LAS+IS++ V G+LFL F + SY P
Sbjct: 188 CTTAAVMGGKSLASQISEKMVGLSSGVLFLLFGIMSYLSGP 228
>sp|P52876|Y615_SYNY3 GDT1-like protein sll0615 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=sll0615 PE=3 SV=1
Length = 206
Score = 166 bits (421), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 132/205 (64%), Gaps = 6/205 (2%)
Query: 76 AFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLI 135
AF A +I VSE+GD+TF IA ++AMR+P+ VL G + L MT+LS +G+I L
Sbjct: 4 AFTAGLLLITVSELGDKTFFIAMILAMRYPRRWVLVGVVGGLAAMTILSVLMGQIFTFLP 63
Query: 136 SRKHTNSAATVLYAFFGLRLLYIAWMSDPKSGQKKEMEEVEEKLESGQGKTTFRRFFSRF 195
+R + N A L+ FG +LL+ A + +EME+ E+ + SG+ K + R
Sbjct: 64 TR-YINYAEVALFLIFGTKLLWDA-RRIKATANLEEMEDAEKAIASGEKKL---KIVPR- 117
Query: 196 CTPIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLA 255
I +ESF LTF+AEWGDR+QIATIALA NA GV+ GA +GHTIC +AV+GG +A
Sbjct: 118 GWGIVVESFALTFVAEWGDRTQIATIALAASNNAWGVSAGAILGHTICAVIAVMGGKFVA 177
Query: 256 SKISQRTVATIGGLLFLCFSLSSYF 280
+IS++TV IGGLLF F++ S++
Sbjct: 178 GRISEKTVTLIGGLLFYLFAVVSWW 202
>sp|Q10320|YD68_SCHPO GDT1-like protein C17G8.08c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC17G8.08c PE=3 SV=1
Length = 287
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/236 (39%), Positives = 132/236 (55%), Gaps = 31/236 (13%)
Query: 76 AFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLI 135
+ I S SMI EIGD+TFI+AAL+A + + TV +G+ SALF+MT+L LG P L
Sbjct: 49 SLIFSISMIFGCEIGDKTFIVAALLAFENSRLTVFAGSYSALFIMTLLGVLLGHAAPLLF 108
Query: 136 SRKHTNSAATVLYAFFGLRLLYIAW-MSDPKSGQKKEMEEV----------EEKLESG-- 182
RK T+ VL+ FG+++L A + D K E + V ++ LE G
Sbjct: 109 PRKLTDILGGVLFVIFGIKMLMEAKEVMDSKESMSDEFQNVRNEIAANGPIDQLLEEGAA 168
Query: 183 -----------------QGKTTFRRFFSRFCTPIFLESFILTFLAEWGDRSQIATIALAT 225
Q K+ R + +P+F+++F LTF++EWGDRSQIATIA+A
Sbjct: 169 PSHYTGHRSRSGHTLMSQLKSKGRNVMATLFSPLFIKAFALTFVSEWGDRSQIATIAMAA 228
Query: 226 HKNAVGVAVGATIGHTICTSLAVVGGSMLASKISQRTVATIGGLLFLCFSLSSYFY 281
N GV +GA +GH CT+LAV+ G +++KI V IGG+LF+ F L YFY
Sbjct: 229 SDNVYGVFMGANVGHACCTALAVISGKYISTKIKVHKVMFIGGILFIAFGL-VYFY 283
>sp|Q9T0H9|GDT12_ARATH GDT1-like protein 2, chloroplastic OS=Arabidopsis thaliana
GN=At4g13590 PE=1 SV=2
Length = 359
Score = 149 bits (375), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 133/219 (60%), Gaps = 23/219 (10%)
Query: 77 FIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLIS 136
F A+FS+I VSEIGD+TF IAAL+AM++ K+ VL G++ AL +MT+LS +G+I ++ +
Sbjct: 146 FTAAFSLIFVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVIGKIFQSVPA 205
Query: 137 RKHT-----NSAATVLYAFFGLRLLYIAWMSDP---KSGQKK-----EMEEVEEKLESGQ 183
+ T AA L FFGL+ + AW P K+G++ E E EE ++
Sbjct: 206 QFQTTLPIGEYAAIALLMFFGLKSIKDAWDLPPVEAKNGEETGIELGEYSEAEELVKEKA 265
Query: 184 GKTTFRRFFSRFCTP--IFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHT 241
K + P I +SF L F AEWGDRS +AT+AL ++ +GVA GA GH
Sbjct: 266 SK--------KLTNPLEILWKSFSLVFFAEWGDRSMLATVALGAAQSPLGVASGAIAGHL 317
Query: 242 ICTSLAVVGGSMLASKISQRTVATIGGLLFLCFSLSSYF 280
+ T LA++GG+ LA+ IS++ V +GG LFL F+ +++F
Sbjct: 318 VATVLAIMGGAFLANYISEKLVGYVGGALFLVFAAATFF 356
>sp|Q2R2Z4|GDT12_ORYSJ GDT1-like protein 2, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os11g0544500 PE=2 SV=1
Length = 347
Score = 148 bits (373), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 136/218 (62%), Gaps = 22/218 (10%)
Query: 77 FIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLIS 136
F A+F++I VSEIGD+TF IAAL+AM++ ++ VL G+++AL +MT++S +GRI ++ +
Sbjct: 135 FTAAFTLIFVSEIGDKTFFIAALLAMQYQRALVLLGSMAALSLMTIVSVIIGRIFQSVPA 194
Query: 137 RKHT-----NSAATVLYAFFGLRLLYIAW-MSDPKSG------QKKEMEEVEEKLESGQG 184
+ T AA L AFFG + + AW + D +G + E+ E EE ++
Sbjct: 195 QFQTTLPIGEYAAIALLAFFGFKSIKDAWQLPDNANGNLQGNSESGELAEAEELVKEKVA 254
Query: 185 KTTFRRFFSRFCTP--IFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTI 242
K + +P + +SF L F AEWGDRS +ATIAL ++ GVA GA GH +
Sbjct: 255 K--------KLTSPLEVLWKSFSLVFFAEWGDRSMLATIALGAAQSPFGVASGAIAGHLV 306
Query: 243 CTSLAVVGGSMLASKISQRTVATIGGLLFLCFSLSSYF 280
T LA+VGG+ LA+ +S++ V IGG+LFL F+++++F
Sbjct: 307 ATFLAIVGGAFLANYLSEKLVGLIGGVLFLLFAVATFF 344
>sp|P38301|GDT1_YEAST GCR1-dependent translation factor 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GDT1 PE=1 SV=1
Length = 280
Score = 137 bits (346), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 128/237 (54%), Gaps = 31/237 (13%)
Query: 76 AFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLI 135
+F+ S SMI +SEIGD+TF+IAALMAMRH + V S A ++L +MT+LS +G +
Sbjct: 41 SFLMSVSMIGLSEIGDKTFLIAALMAMRHKRVLVFSAAATSLAIMTILSGVVGHSAVAFL 100
Query: 136 SRKHTNSAATVLYAFFGLRLLYIAWMSDPKSGQK------------KEMEEVEEKLESGQ 183
S ++T A +L+ FG +L +G + K+M + + +E G
Sbjct: 101 SERYTAFFAGILFLVFGYKLTMEGLEMSKDAGVEEEMAEVEEEIAIKDMNQDMDDVEKG- 159
Query: 184 GKTTF-----------------RRFFSRFCTPIFLESFILTFLAEWGDRSQIATIALATH 226
G T + R S +P++++ F++ FL E GDRSQI+ IA+AT
Sbjct: 160 GDTAYDKQLKNASIGKKIVHRIRELASFMFSPVWVQIFLMVFLGELGDRSQISIIAMATD 219
Query: 227 KNAVGVAVGATIGHTICTSLAVVGGSMLASKISQRTVATIGGLLFLCFSLSSYFYPP 283
+ V GA IGH IC+ LAVVGG +LA++IS RT+ LLF F+L Y Y
Sbjct: 220 SDYWYVIAGAVIGHAICSGLAVVGGKLLATRISIRTITLASSLLFFIFAL-MYIYQA 275
>sp|Q9P7Q0|YLY5_SCHPO GDT1-like protein C186.05c OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPAC186.05c PE=3 SV=1
Length = 262
Score = 114 bits (285), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 128/249 (51%), Gaps = 36/249 (14%)
Query: 64 PLNIDSGLGVFD-------AFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSA 116
PLN+++ LG S SMII E+GD++FI+ AL+A ++ +++V G+ A
Sbjct: 7 PLNLETTLGSLQFSHGSVQNIGMSISMIIGCELGDKSFIVTALLAYQYGRASVFFGSYLA 66
Query: 117 LFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAW-MSDPKSGQKKEMEEV 175
LF MT + +GR P L + T+ L+ FG+++L + + + + + E ++V
Sbjct: 67 LFFMTSFAVLVGRAAPFLFPKSITHILGGTLFLIFGVKMLKESKEVRESQQSLENEFDKV 126
Query: 176 EEKL--ESGQGKT--------------------------TFRRFFSRFCTPIFLESFILT 207
E+ + E KT F+ FS+ + F+++F L
Sbjct: 127 EKIIVNEEDMKKTLELGLPASNRSSSTLKDKFFKVFSMSCFKNLFSKKFSRAFIKAFALI 186
Query: 208 FLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKISQRTVATIG 267
F++E GDRSQIATI ++ + + V +G IGH +CT +AV+ G +++KI V G
Sbjct: 187 FVSELGDRSQIATIVMSAKEKVLDVFIGVNIGHMLCTMVAVIVGRYISNKIEMYKVLFFG 246
Query: 268 GLLFLCFSL 276
G++F+ F +
Sbjct: 247 GIVFMIFGI 255
>sp|Q94AX5|GDT11_ARATH GDT1-like protein 1, chloroplastic OS=Arabidopsis thaliana
GN=At1g64150 PE=2 SV=2
Length = 370
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 132/249 (53%), Gaps = 27/249 (10%)
Query: 37 DPSRSAKDLGRRGLILSQDLENELGTIPLNIDSGLGVFDAFIASFSMIIVSEIGDETFII 96
DP+ +A + ++Q L G + +I SG F ++F +I SE+GD+TF I
Sbjct: 130 DPAFAASSIPN----VTQSLVTSFGDLG-DISSG------FASAFLLIFFSELGDKTFFI 178
Query: 97 AALMAMRHPKSTVLSGALSALFVMTVLSTGLGRI---VPNLISRKHTNS-------AATV 146
AAL+A R+ +TV G AL +MT++S LGR V ++ + + AA
Sbjct: 179 AALLAARNSAATVFVGTFGALGIMTIISVVLGRTFHYVDEVLPFRFGGTDLPIDDIAAVC 238
Query: 147 LYAFFGLRLLYIAWMSDPKSGQKKEMEEVEEKLESGQGKTTFRRFFSRFCTPIFLESFIL 206
L +FG+ L A + K+ ++++ E+ SG G + +F L
Sbjct: 239 LLVYFGVSTLLDAVSDEGKADEEQKEAELAVSELSGNGAGIVA------AANTIISTFAL 292
Query: 207 TFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKISQRTVATI 266
F+AEWGD+S +TIALA + +GV GA GH T LAV+GGS+L + +S++ +A +
Sbjct: 293 VFVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGAATLLAVLGGSLLGNFLSEKAIAYV 352
Query: 267 GGLLFLCFS 275
GG+LFL F+
Sbjct: 353 GGVLFLVFA 361
>sp|Q5NAY7|GDT11_ORYSJ GDT1-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os01g0221700 PE=3 SV=2
Length = 341
Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 123/235 (52%), Gaps = 31/235 (13%)
Query: 54 QDLENELGTIPLNIDSGLGVFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGA 113
QD+ +LG +I +G F ++F +I SE+GD TF IAAL+A R+ + + G
Sbjct: 115 QDVVGDLG----DISTG------FASAFLLIFFSELGDRTFFIAALLAARNSGAIIFLGT 164
Query: 114 LSALFVMTVLSTGLGR-------IVPNLISRKH---TNSAATVLYAFFGLRLLYIAWMSD 163
AL VMT++S LGR I+P + A L ++G+ L A D
Sbjct: 165 FGALAVMTIISVVLGRAFHYVDGIIPFSFGGTDFPVDDFLAACLLVYYGITTLLDAASGD 224
Query: 164 PKSGQKKEMEE---VEEKLESGQGKTTFRRFFSRFCTPIFLESFILTFLAEWGDRSQIAT 220
+ +++ E V + L +G G + +F+L F+AEWGD+S +T
Sbjct: 225 EEKMNEEQEEAELAVSKFLGNGAGIIS--------AASTIASTFVLVFIAEWGDKSFFST 276
Query: 221 IALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKISQRTVATIGGLLFLCFS 275
IALA + +GV G+ GH + T +AV+GGS+L + +S++ VA IGG LFL F+
Sbjct: 277 IALAAASSPLGVIAGSLAGHAVATLIAVLGGSLLGTFLSEKIVAYIGGSLFLAFA 331
>sp|B8AAM2|GDT11_ORYSI GDT1-like protein 1, chloroplastic OS=Oryza sativa subsp. indica
GN=OsI_00941 PE=3 SV=2
Length = 341
Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 123/235 (52%), Gaps = 31/235 (13%)
Query: 54 QDLENELGTIPLNIDSGLGVFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGA 113
QD+ +LG +I +G F ++F +I SE+GD TF IAAL+A R+ + + G
Sbjct: 115 QDVVGDLG----DISTG------FASAFLLIFFSELGDRTFFIAALLAARNSGAIIFLGT 164
Query: 114 LSALFVMTVLSTGLGR-------IVPNLISRKH---TNSAATVLYAFFGLRLLYIAWMSD 163
AL VMT++S LGR I+P + A L ++G+ L A D
Sbjct: 165 FGALAVMTIISVVLGRAFHYVDGIIPFSFGGTDFPVDDFLAACLLVYYGVTTLLDAASGD 224
Query: 164 PKSGQKKEMEE---VEEKLESGQGKTTFRRFFSRFCTPIFLESFILTFLAEWGDRSQIAT 220
+ +++ E V + L +G G + +F+L F+AEWGD+S +T
Sbjct: 225 EEKMNEEQEEAELAVSKFLGNGAGIIS--------AASTIASTFVLVFIAEWGDKSFFST 276
Query: 221 IALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKISQRTVATIGGLLFLCFS 275
IALA + +GV G+ GH + T +AV+GGS+L + +S++ VA IGG LFL F+
Sbjct: 277 IALAAASSPLGVIAGSLAGHAVATLIAVLGGSLLGTFLSEKIVAYIGGSLFLAFA 331
>sp|Q82MJ7|IDI_STRAW Isopentenyl-diphosphate Delta-isomerase OS=Streptomyces avermitilis
(strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804
/ NRRL 8165 / MA-4680) GN=idi PE=3 SV=1
Length = 197
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 45/103 (43%), Gaps = 21/103 (20%)
Query: 40 RSAKDLGRRGLILSQDLENELGTIPLN---IDSGL------GVFDAFIASFSMIIVSEIG 90
R+ ++LG +S L E GT+ N DSGL +F + S EIG
Sbjct: 99 RTHEELG-----VSPSLLAEAGTVRYNHPDPDSGLVEQEFNHLFVGLVQSPLRPDAEEIG 153
Query: 91 DETFIIAALMAMRHPKS-------TVLSGALSALFVMTVLSTG 126
D F+ AA +A RH K TVL A A+ +T S G
Sbjct: 154 DTAFVTAAELAERHAKDPFSSWFMTVLDAARPAVRELTGPSAG 196
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,525,035
Number of Sequences: 539616
Number of extensions: 3421150
Number of successful extensions: 10702
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 10631
Number of HSP's gapped (non-prelim): 36
length of query: 284
length of database: 191,569,459
effective HSP length: 116
effective length of query: 168
effective length of database: 128,974,003
effective search space: 21667632504
effective search space used: 21667632504
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)