Query 023308
Match_columns 284
No_of_seqs 198 out of 1657
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 03:02:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023308.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023308hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00184 aquaporin NIP1; Provi 100.0 3.8E-55 8.3E-60 396.7 22.7 239 46-284 49-294 (296)
2 KOG0223 Aquaporin (major intri 100.0 6.7E-52 1.5E-56 363.2 19.8 220 45-265 5-228 (238)
3 PLN00182 putative aquaporin NI 100.0 8.8E-51 1.9E-55 366.1 23.2 258 7-271 4-262 (283)
4 PLN00026 aquaporin NIP; Provi 100.0 7.8E-49 1.7E-53 354.9 20.9 230 47-277 67-296 (298)
5 PTZ00016 aquaglyceroporin; Pro 100.0 6.9E-47 1.5E-51 343.6 22.5 219 48-266 47-293 (294)
6 COG0580 GlpF Glycerol uptake f 100.0 1.4E-46 3.1E-51 328.7 19.0 215 49-263 3-240 (241)
7 PRK05420 aquaporin Z; Provisio 100.0 9.3E-46 2E-50 326.2 21.5 213 51-264 2-229 (231)
8 PLN00183 putative aquaporin NI 100.0 6.8E-46 1.5E-50 333.2 19.8 219 48-267 42-260 (274)
9 PLN00027 aquaporin TIP; Provis 100.0 8.1E-46 1.8E-50 330.5 20.2 219 48-266 17-242 (252)
10 KOG0224 Aquaporin (major intri 100.0 6.2E-47 1.3E-51 334.4 12.7 225 44-269 25-281 (316)
11 PLN00167 aquaporin TIP5; Provi 100.0 2.8E-45 6E-50 327.0 23.4 222 46-267 17-244 (256)
12 PLN00166 aquaporin TIP2; Provi 100.0 2.6E-45 5.7E-50 326.4 20.6 216 48-263 15-237 (250)
13 PF00230 MIP: Major intrinsic 100.0 8E-46 1.7E-50 326.5 15.1 213 46-258 3-227 (227)
14 cd00333 MIP Major intrinsic pr 100.0 4.4E-42 9.5E-47 303.0 17.6 210 52-261 1-228 (228)
15 TIGR00861 MIP MIP family chann 100.0 9.6E-40 2.1E-44 285.9 16.1 203 56-258 1-216 (216)
16 PLN00184 aquaporin NIP1; Provi 99.6 9.6E-16 2.1E-20 139.5 6.6 99 166-264 52-156 (296)
17 PLN00026 aquaporin NIP; Provi 99.6 1.1E-15 2.4E-20 138.9 6.6 100 165-264 68-173 (298)
18 PLN00183 putative aquaporin NI 99.6 5.4E-15 1.2E-19 133.3 9.6 111 50-166 160-270 (274)
19 PLN00182 putative aquaporin NI 99.6 6.5E-15 1.4E-19 133.3 9.7 98 49-152 157-254 (283)
20 cd00333 MIP Major intrinsic pr 99.6 1.2E-14 2.6E-19 128.3 9.8 99 48-149 127-227 (228)
21 PLN00166 aquaporin TIP2; Provi 99.5 1.7E-14 3.8E-19 128.7 5.9 98 166-263 16-124 (250)
22 PLN00167 aquaporin TIP5; Provi 99.5 3.5E-14 7.6E-19 127.1 7.0 99 166-264 20-129 (256)
23 TIGR00861 MIP MIP family chann 99.5 1.4E-13 3.1E-18 120.4 9.3 96 48-146 119-215 (216)
24 PLN00027 aquaporin TIP; Provis 99.5 1.1E-13 2.5E-18 123.7 6.8 98 166-263 18-126 (252)
25 PTZ00016 aquaglyceroporin; Pro 99.4 1E-13 2.2E-18 126.5 6.3 99 166-264 48-152 (294)
26 PRK05420 aquaporin Z; Provisio 99.4 1.4E-13 3E-18 121.6 6.7 97 168-264 2-105 (231)
27 KOG0223 Aquaporin (major intri 99.4 5.5E-13 1.2E-17 117.5 7.2 100 48-154 129-228 (238)
28 KOG0224 Aquaporin (major intri 99.3 6.4E-13 1.4E-17 118.6 4.7 99 166-264 30-135 (316)
29 COG0580 GlpF Glycerol uptake f 99.3 1.4E-12 3E-17 114.8 5.8 102 168-269 5-115 (241)
30 PF00230 MIP: Major intrinsic 99.1 4.7E-10 1E-14 98.8 8.8 96 48-147 132-227 (227)
31 PRK10805 formate transporter; 95.2 0.23 4.9E-06 45.4 10.6 96 88-187 72-181 (285)
32 COG2116 FocA Formate/nitrite f 94.1 0.54 1.2E-05 42.4 10.0 179 83-267 63-262 (265)
33 PRK11562 nitrite transporter N 91.8 2.2 4.7E-05 38.7 10.6 170 88-266 62-253 (268)
34 PRK09713 focB putative formate 89.5 5.3 0.00012 36.4 11.1 98 88-188 71-181 (282)
35 TIGR00790 fnt formate/nitrite 85.0 8.9 0.00019 34.0 9.7 77 111-187 68-157 (239)
36 PF01226 Form_Nir_trans: Forma 79.3 13 0.00029 33.2 8.6 100 87-188 60-171 (250)
37 PF04632 FUSC: Fusaric acid re 74.3 55 0.0012 33.0 12.5 135 99-265 356-493 (650)
38 PRK10631 p-hydroxybenzoic acid 46.1 2.7E+02 0.0059 28.7 11.4 124 108-264 381-504 (652)
39 PF01384 PHO4: Phosphate trans 44.2 2.4E+02 0.0051 26.2 10.0 56 198-264 92-147 (326)
40 PF03033 Glyco_transf_28: Glyc 34.5 11 0.00024 29.5 -0.5 21 103-123 5-25 (139)
41 PRK12446 undecaprenyldiphospho 33.9 9.1 0.0002 35.8 -1.2 22 101-122 6-27 (352)
42 COG0306 PitA Phosphate/sulphat 33.1 1.8E+02 0.0039 27.2 7.2 23 243-265 139-161 (326)
43 COG1289 Predicted membrane pro 30.5 1.8E+02 0.0038 29.8 7.4 27 125-151 399-425 (674)
44 PRK14206 camphor resistance pr 29.2 2.9E+02 0.0062 21.9 6.9 108 137-258 7-118 (127)
45 KOG1330 Sugar transporter/spin 26.0 57 0.0012 32.1 2.7 28 239-266 187-214 (493)
46 PRK14195 camphor resistance pr 25.1 3.2E+02 0.007 21.5 6.5 107 137-259 8-118 (125)
47 PRK14225 camphor resistance pr 23.3 3.8E+02 0.0083 21.5 6.7 111 136-260 16-130 (137)
48 COG3448 CBS-domain-containing 22.8 3.7E+02 0.0081 25.1 7.1 64 125-188 24-102 (382)
49 KOG4647 Uncharacterized membra 20.7 1.7E+02 0.0037 25.9 4.3 34 32-67 78-111 (263)
50 PRK14217 camphor resistance pr 20.1 4.2E+02 0.0092 21.2 6.4 108 138-261 11-122 (134)
51 PF13940 Ldr_toxin: Toxin Ldr, 20.1 1.3E+02 0.0028 18.3 2.4 20 243-262 13-32 (35)
No 1
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=3.8e-55 Score=396.70 Aligned_cols=239 Identities=73% Similarity=1.220 Sum_probs=210.7
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCccCchHHHHHHHHHHHHHHHHHccCCCccCChHhhHHHHHhcCCC
Q 023308 46 FSVPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFP 125 (284)
Q Consensus 46 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPAVTla~~l~g~~~ 125 (284)
.+.+++|++++||+|||+|+|++|+++..+...+....++.++++||+++++.+++++++||||+|||||+++++.|+++
T Consensus 49 ~~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~ 128 (296)
T PLN00184 49 VSVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFP 128 (296)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCC
Confidence 34678999999999999999999998765433322235677899999999999999999999999999999999999999
Q ss_pred CCcccchhhhhhhHHHHHHHHHHHHhhcccc-------cccccCCCCcchhhHHHHHHHHHHHHHHHhhhccccccccch
Q 023308 126 WKQVPPYILCQVLGSTLAAGTLRLLFQEKQD-------QFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGEL 198 (284)
Q Consensus 126 ~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~-------~~~~~~p~~s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~~~~~ 198 (284)
|.++++||++|++||++|+++++.+++.... ...++.|..+..++|+.|+++||+|+++++++..+++..+.+
T Consensus 129 ~~~~~~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~~~~~~ 208 (296)
T PLN00184 129 LKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNRAIGEL 208 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccCcCCCcc
Confidence 9999999999999999999999998853211 122345556888999999999999999999886666555568
Q ss_pred hhHHHHHHHHHHHHHhcCCccCccchhhhHHHHHhhhCCCceeeeeecchHHHHHHHHHHHHHhcCCCcccccccccccc
Q 023308 199 AGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKPLREITKSASFL 278 (284)
Q Consensus 199 ~~l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~~~~~~~~~~~~~~ 278 (284)
.++.||+++.+.+++.+++||++|||||+|||+++.+.|+++||||++|++|+++|+++|+++..++++.++.+++.+|+
T Consensus 209 ~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~~~~~~WVy~vgPilGa~laal~y~~l~~~~~~~~~~~~~~~~~ 288 (296)
T PLN00184 209 AGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYGCYKGIWIYIVAPTLGAIAGAWVYNTVRYTDKPLREITKSGSFL 288 (296)
T ss_pred hHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhhcccccchHHhHHHHHHHHHHHHHHHHhcCCCcchhhccchHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCC
Q 023308 279 KGAGRS 284 (284)
Q Consensus 279 ~~~~~~ 284 (284)
|+.+++
T Consensus 289 ~~~~~~ 294 (296)
T PLN00184 289 KTVRIG 294 (296)
T ss_pred hhhccC
Confidence 988763
No 2
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.7e-52 Score=363.18 Aligned_cols=220 Identities=47% Similarity=0.742 Sum_probs=199.4
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCccCchHHHHHHHHHHHHHHHHHccCCCccCChHhhHHHHHhcCC
Q 023308 45 YFSVPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRF 124 (284)
Q Consensus 45 ~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPAVTla~~l~g~~ 124 (284)
..+.+.+|++++||+||++++|++|++...+...+...+.+.+++.+|+++++.++++|++||||+|||||+++++.|++
T Consensus 5 ~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~~i 84 (238)
T KOG0223|consen 5 LLSVSFLRALIAEFLATFLFVFAGCGSVVVNPKYGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGGKI 84 (238)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhCCC
Confidence 34568999999999999999999999987666434445688899999999999999999999999999999999999999
Q ss_pred CCCcccchhhhhhhHHHHHHHHHHHHhhcc----cccccccCCCCcchhhHHHHHHHHHHHHHHHhhhccccccccchhh
Q 023308 125 PWKQVPPYILCQVLGSTLAAGTLRLLFQEK----QDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAG 200 (284)
Q Consensus 125 ~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~----~~~~~~~~p~~s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~~~~~~~ 200 (284)
++.++..|+++|++|+++|+++++.+.+.+ ........+..+..|+++.|++.||.|+++++.+.+|+|+. .+.+
T Consensus 85 sl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~-~~a~ 163 (238)
T KOG0223|consen 85 SLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS-ELAP 163 (238)
T ss_pred cHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc-ccHH
Confidence 999999999999999999999999999864 11122245566899999999999999999999977888776 8999
Q ss_pred HHHHHHHHHHHHHhcCCccCccchhhhHHHHHhhhCCCceeeeeecchHHHHHHHHHHHHHhcCC
Q 023308 201 LAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTD 265 (284)
Q Consensus 201 l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~ 265 (284)
+.||+++.+.+++.+++||++|||||+|||++..+.|+++|+||++|++|+++|+++|++++.++
T Consensus 164 l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 164 LAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYGSWDDHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred HHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhcCCCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 99999999999999999999999999999999999999999999999999999999999998776
No 3
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=8.8e-51 Score=366.11 Aligned_cols=258 Identities=55% Similarity=0.925 Sum_probs=208.1
Q ss_pred CCCCCcccceecccccc-ccCCCCCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCccCch
Q 023308 7 TGSNGVCVTFKDCEDAI-QNCPSSAAPPPPPSCGTKDSVYFSVPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLP 85 (284)
Q Consensus 7 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~ 85 (284)
.+|+.+.|++..+|... .|++.++..+ ...+.. ..+++|++++||+|||+|+|+++++.......+.....+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~p~---~~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~~~~~~~ 76 (283)
T PLN00182 4 HSDEIEEEQISRIEKGNGKDSQGGIETA----ICTSPS---IVCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFP 76 (283)
T ss_pred CCCCCCcccccccccCCCCCcccccccc----hhcCCc---hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcchH
Confidence 34455555666666644 3443333221 111111 246889999999999999999999766433222223456
Q ss_pred HHHHHHHHHHHHHHHHHccCCCccCChHhhHHHHHhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhcccccccccCCCC
Q 023308 86 GISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAG 165 (284)
Q Consensus 86 ~~al~~g~~~~~~i~~~~~iSGah~NPAVTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~p~~ 165 (284)
.++++||+++++.+++++++||||+|||||+++++.|+++|.+++.|+++|++|+++|+++++.+++.......++.|..
T Consensus 77 ~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~~~~~~~~~Yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~p~~ 156 (283)
T PLN00182 77 GICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWYQVPLYIGAQLTGSLLASLTLRLMFNVTPEAFFGTTPTD 156 (283)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccceeeCCCCc
Confidence 67889999999999999999999999999999999999999999999999999999999999998864434445567777
Q ss_pred cchhhHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHhcCCccCccchhhhHHHHHhhhCCCceeeeee
Q 023308 166 SNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIV 245 (284)
Q Consensus 166 s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~~~~~~~l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v 245 (284)
+..++++.|+++||+|+++++++..+++..+...++.+|+++.+.+++.+++||+++||||+|||+++.+.|.++|+||+
T Consensus 157 s~~~a~~~E~l~TfiLv~~i~~~~~~~~~~~~~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~~~~~~wvY~v 236 (283)
T PLN00182 157 SSGQALVAEIIISFLLMFVISGVATDSRAVGELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMGRYKGIWVYIV 236 (283)
T ss_pred chHHHHHHHHHHHHHHHHHHHhheeccccCCcchhHHHHHHHHHHHHHccccCccccChHHHHHHHHHhccccceeHHHH
Confidence 88899999999999999999987656554455789999999999999999999999999999999999889999999999
Q ss_pred cchHHHHHHHHHHHHHhcCCCccccc
Q 023308 246 APPLGATAGAWVYNMVRYTDKPLREI 271 (284)
Q Consensus 246 ~p~~Ga~la~~l~~~~~~~~~~~~~~ 271 (284)
+|++|+++|+++|+++..++.+..+.
T Consensus 237 ap~lGA~lgally~~l~~~~~~~~~~ 262 (283)
T PLN00182 237 GPFVGIIAGGFVYNLIRFTDKPLREL 262 (283)
T ss_pred HHHHHHHHHHHHHHHHhccCCccccc
Confidence 99999999999999998654443333
No 4
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=7.8e-49 Score=354.85 Aligned_cols=230 Identities=49% Similarity=0.778 Sum_probs=196.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCccCchHHHHHHHHHHHHHHHHHccCCCccCChHhhHHHHHhcCCCC
Q 023308 47 SVPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPW 126 (284)
Q Consensus 47 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPAVTla~~l~g~~~~ 126 (284)
..+++|++++||+|||+|+|+++++...+...+....+..+++++|+++++.+++++++||||+|||||+++++.|+++|
T Consensus 67 ~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~~~~ 146 (298)
T PLN00026 67 DVSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPW 146 (298)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCCCcH
Confidence 45688999999999999999999865543322222346667899999999999999999999999999999999999999
Q ss_pred CcccchhhhhhhHHHHHHHHHHHHhhcccccccccCCCCcchhhHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHH
Q 023308 127 KQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGST 206 (284)
Q Consensus 127 ~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~p~~s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~~~~~~~l~ig~~ 206 (284)
.++++||++|++|+++|+++++.++++... ...+.|..+..++++.|+++||+|+++++++..|++..+...++.||++
T Consensus 147 ~~~~~YiiaQilGAi~aa~~~~~~~~~~~~-~g~t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~~~~~~~l~iGl~ 225 (298)
T PLN00026 147 KHVPAYIAAQVSASICASFALKGVFHPFMS-GGVTVPSVSTGQAFALEFIITFNLLFVVTAVATDTRAVGELAGIAVGAT 225 (298)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccc-CceeeecccHHHHHHHHHHHHHHHHHhheeeecCCCCcCCccchHHHHH
Confidence 999999999999999999999998864221 1125566788899999999999999999987666655555788999999
Q ss_pred HHHHHHHhcCCccCccchhhhHHHHHhhhCCCceeeeeecchHHHHHHHHHHHHHhcCCCccccccccccc
Q 023308 207 VLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKPLREITKSASF 277 (284)
Q Consensus 207 v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~~~~~~~~~~~~~ 277 (284)
+.+.+++.+++||++|||||+|||+++.++|.++|+||++|++|+++++++|+++..++++.+..++..+|
T Consensus 226 V~~~~l~~g~~TGa~mNPARtlgPal~~~~~~~~wVy~vaPilGAilga~ly~~~~~~~~~~~~~~~~~~~ 296 (298)
T PLN00026 226 VMLNILVAGPSTGGSMNPVRTLGPAVAAGNYRAIWIYLVAPTLGALAGAGTYTAVKLREEDGDPPRPVRSF 296 (298)
T ss_pred HHHHHHHhcccCccccChHHHHHHHHhcCCchheeHHHHHHHHHHHHHHHHHHHHhCccccccChhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999997666655555544443
No 5
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=6.9e-47 Score=343.58 Aligned_cols=219 Identities=32% Similarity=0.497 Sum_probs=184.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCccCchHHHHHHHHHHHHHHHHHccCCCccCChHhhHHHHHhcCCCCC
Q 023308 48 VPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWK 127 (284)
Q Consensus 48 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPAVTla~~l~g~~~~~ 127 (284)
++++|++++||+||++|+|+++++.......+...+.+.++++||+++.+.+++++++||||+|||||+++++.|+++|.
T Consensus 47 ~~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~~~ 126 (294)
T PTZ00016 47 RPNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWK 126 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCCHH
Confidence 67889999999999999999998765432222123456789999999999999999999999999999999999999999
Q ss_pred cccchhhhhhhHHHHHHHHHHHHhhcccc-----------------cccccCCCCcchhhHHHHHHHHHHHHHHHhhhcc
Q 023308 128 QVPPYILCQVLGSTLAAGTLRLLFQEKQD-----------------QFAGTLPAGSNIQAFVMEFIITFYLMFVISGVAT 190 (284)
Q Consensus 128 ~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~-----------------~~~~~~p~~s~~~~~~~E~~~Tf~l~~~i~~~~~ 190 (284)
+++.|+++|++|+++|+++++.++++... ....+.|..+..++++.|+++||+|+++++.+.+
T Consensus 127 ~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~ila~~d 206 (294)
T PTZ00016 127 KLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVILAITD 206 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999998864211 0122455557789999999999999999998754
Q ss_pred ccccc-cchhhHHHHHHHHHHHHHhcCCccCccchhhhHHHHHhh------hCCC----ceeeeeecchHHHHHHHHHHH
Q 023308 191 DNRAI-GELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVS------SQYK----GLWIYIVAPPLGATAGAWVYN 259 (284)
Q Consensus 191 ~~~~~-~~~~~l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~------~~~~----~~wvy~v~p~~Ga~la~~l~~ 259 (284)
+++.. ....|+.+|+++.+++++.++.||++|||||+|||+++. ..|. ++||||++|++|+++|+++|+
T Consensus 207 ~~~~~~~~~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa~~aally~ 286 (294)
T PTZ00016 207 PNNCPAFNYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGAVLGMFLYD 286 (294)
T ss_pred CccCCCcCcccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHHHHHHHHHH
Confidence 43322 346799999999999999999999999999999999996 2354 689999999999999999999
Q ss_pred HHhcCCC
Q 023308 260 MVRYTDK 266 (284)
Q Consensus 260 ~~~~~~~ 266 (284)
++..++.
T Consensus 287 ~ll~~~~ 293 (294)
T PTZ00016 287 KFIPPLI 293 (294)
T ss_pred HHhCCCC
Confidence 9986553
No 6
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-46 Score=328.68 Aligned_cols=215 Identities=42% Similarity=0.663 Sum_probs=186.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhcc---cCCCccCchHHHHHHHHHHHHHHHHHccCCCccCChHhhHHHHHhcCCC
Q 023308 49 PFMQKLMAEILGTYFMIFAGCASVVVNL---NNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFP 125 (284)
Q Consensus 49 ~~~~~~~~EfigT~~lv~~~~~~~~~~~---~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPAVTla~~l~g~~~ 125 (284)
++.+++++||+||++|+++++++.+... .++...++..++++||+++.+.+++++++||||+|||||+++++.|+++
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp 82 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFP 82 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCC
Confidence 5778899999999999999999876543 2234566778999999999999999999999999999999999999999
Q ss_pred CCcccchhhhhhhHHHHHHHHHHHHhhcccccc----------cccCCCC-cchhhHHHHHHHHHHHHHHHhhhcccccc
Q 023308 126 WKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQF----------AGTLPAG-SNIQAFVMEFIITFYLMFVISGVATDNRA 194 (284)
Q Consensus 126 ~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~----------~~~~p~~-s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~ 194 (284)
|++++.||++|++||++|+.+++.+++...... ..+.|.. +..++|+.|+++||+|++.++++.++++.
T Consensus 83 ~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~~~~ 162 (241)
T COG0580 83 WRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDGNA 162 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhccCcc
Confidence 999999999999999999999999886432221 2255653 67889999999999999999998766655
Q ss_pred ccchhhHHHHHHHHHHHHHhcCCccCccchhhhHHHHHhhh---------CCCceeeeeecchHHHHHHHHHHHHHhc
Q 023308 195 IGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS---------QYKGLWIYIVAPPLGATAGAWVYNMVRY 263 (284)
Q Consensus 195 ~~~~~~l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~---------~~~~~wvy~v~p~~Ga~la~~l~~~~~~ 263 (284)
+..+.|+.+|+.+...+++.++.||.++|||||+||++... ++.+.|+||++|++|+++++++|+.++.
T Consensus 163 ~~~~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~~~~ 240 (241)
T COG0580 163 NAGFAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKLLLG 240 (241)
T ss_pred cccchHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHHHcc
Confidence 33599999999999999999999999999999999999652 2358999999999999999999998763
No 7
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=9.3e-46 Score=326.20 Aligned_cols=213 Identities=37% Similarity=0.674 Sum_probs=180.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhcc-cCCCccCchHHHHHHHHHHHHHHHHHccCCCccCChHhhHHHHHhcCCCCCcc
Q 023308 51 MQKLMAEILGTYFMIFAGCASVVVNL-NNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQV 129 (284)
Q Consensus 51 ~~~~~~EfigT~~lv~~~~~~~~~~~-~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPAVTla~~l~g~~~~~~~ 129 (284)
+|++++||+||++|+++++++..... .++...+...+++++|+++.+.+++++++||+|+|||||+++++.|+++|.+.
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~ 81 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKEL 81 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHHh
Confidence 68999999999999999999765422 12222345667999999999999999999999999999999999999999999
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhcccc-c-----c--c---ccCCC-CcchhhHHHHHHHHHHHHHHHhhhccccccccc
Q 023308 130 PPYILCQVLGSTLAAGTLRLLFQEKQD-Q-----F--A---GTLPA-GSNIQAFVMEFIITFYLMFVISGVATDNRAIGE 197 (284)
Q Consensus 130 ~~yi~aQ~lGa~~g~~~~~~~~~~~~~-~-----~--~---~~~p~-~s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~~~~ 197 (284)
+.|+++|++|+++|+++++.+++.+.. . . . .+.|. .+..++++.|+++|++|+++++.+. |+++...
T Consensus 82 ~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~~-~~~~~~~ 160 (231)
T PRK05420 82 VPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGAT-DKRAPAG 160 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHh-CCCCCCc
Confidence 999999999999999999988754321 0 0 0 11233 2677999999999999999999874 4444455
Q ss_pred hhhHHHHHHHHHHHHHhcCCccCccchhhhHHHHHhhhCC--CceeeeeecchHHHHHHHHHHHHHhcC
Q 023308 198 LAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQY--KGLWIYIVAPPLGATAGAWVYNMVRYT 264 (284)
Q Consensus 198 ~~~l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~--~~~wvy~v~p~~Ga~la~~l~~~~~~~ 264 (284)
..|+.+|+++...+++.+++||++|||||+|||+++.++| +++|+||++|++|+++++++|++++..
T Consensus 161 ~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~ 229 (231)
T PRK05420 161 FAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLLEK 229 (231)
T ss_pred chHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCCCccceEEeehHHHHHHHHHHHHHHHHhcc
Confidence 7899999999999999999999999999999999998766 589999999999999999999998743
No 8
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=6.8e-46 Score=333.24 Aligned_cols=219 Identities=42% Similarity=0.733 Sum_probs=189.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCccCchHHHHHHHHHHHHHHHHHccCCCccCChHhhHHHHHhcCCCCC
Q 023308 48 VPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWK 127 (284)
Q Consensus 48 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPAVTla~~l~g~~~~~ 127 (284)
.+.+|.+++||+|||+++|+++++...........++..+++.+|+++.+.+++++++||||+|||||+++++.|+++|.
T Consensus 42 ~~~~~~~laEfigTfllvf~~~g~~~~~~~~~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g~i~~~ 121 (274)
T PLN00183 42 LNPARMVLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFGHFPWS 121 (274)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhcCCCHH
Confidence 56789999999999999999998765433222223455678899999999999999999999999999999999999999
Q ss_pred cccchhhhhhhHHHHHHHHHHHHhhcccccccccCCCCcchhhHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHH
Q 023308 128 QVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTV 207 (284)
Q Consensus 128 ~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~p~~s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~~~~~~~l~ig~~v 207 (284)
++++||++|++|+++|+.+++.+++... ....+.|..+..++++.|+++|++|+++++++..+++..+...++.+|+.+
T Consensus 122 ~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~-~~~~~~p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~~~~~~~l~iGl~v 200 (274)
T PLN00183 122 KVPLYITAQTVGSVLATYVGVSVYGVKA-DLMTTKPAQGCSSAFWVEFIATFIVMFLAASLTSQPQSLGHLSGFVIGIAI 200 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccccCCCcccHHHHHHHHHHHHHHHHHhhheeeccccCCCCceehHHHHHH
Confidence 9999999999999999999988886432 233455666678999999999999999999875554444456789999999
Q ss_pred HHHHHHhcCCccCccchhhhHHHHHhhhCCCceeeeeecchHHHHHHHHHHHHHhcCCCc
Q 023308 208 LLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKP 267 (284)
Q Consensus 208 ~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~~~ 267 (284)
++.+++.+++||+++||||+|+|+++...|+++|+||++|++|+++++++|++++.+..+
T Consensus 201 ~~~v~~~g~~TG~~~NPArtlgpai~~~~~~~~wvy~vapilGailaa~l~~~l~~~~~~ 260 (274)
T PLN00183 201 GLAVLITGPVSGGSMNPARSLGPAIVSWDFKDIWIYITAPTIGAVAGALMFHLLRLRTQP 260 (274)
T ss_pred HHHHHhccCCCCCEeCHHHHHHHHHhCCChhheehHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 999999999999999999999999999899999999999999999999999999866544
No 9
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=8.1e-46 Score=330.50 Aligned_cols=219 Identities=28% Similarity=0.411 Sum_probs=188.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhc---ccCC--CccCchHHHHHHHHHHHHHHHHHccCCCccCChHhhHHHHHhc
Q 023308 48 VPFMQKLMAEILGTYFMIFAGCASVVVN---LNNE--KIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCK 122 (284)
Q Consensus 48 ~~~~~~~~~EfigT~~lv~~~~~~~~~~---~~~~--~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPAVTla~~l~g 122 (284)
++.+|++++||+||++|+++++++.+.. ...+ .....+.+++++|+++.+.+++++++||+|+|||||+++++.|
T Consensus 17 ~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g 96 (252)
T PLN00027 17 PDALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGG 96 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhC
Confidence 4688999999999999999999886431 1111 1224556899999999999999999999999999999999999
Q ss_pred CCCCCcccchhhhhhhHHHHHHHHHHHHhhcccccccccCCCCcchhhHHHHHHHHHHHHHHHhhhccccccc--cchhh
Q 023308 123 RFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAI--GELAG 200 (284)
Q Consensus 123 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~p~~s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~~--~~~~~ 200 (284)
+++|.+.+.|+++|++|+++|+++++.+.++.......+.|..+..++++.|+++||+|+++++.+..|+++. +.+.+
T Consensus 97 ~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~~~p 176 (252)
T PLN00027 97 NITLLRGILYWIAQLLGSVVACLLLKFSTGGLETSAFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPKKGDLGIIAP 176 (252)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCccHHHHHHHHHHHHHHHHHHHHHhccccccCCccchHH
Confidence 9999999999999999999999999887754333334455666888999999999999999999876555432 34789
Q ss_pred HHHHHHHHHHHHHhcCCccCccchhhhHHHHHhhhCCCceeeeeecchHHHHHHHHHHHHHhcCCC
Q 023308 201 LAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDK 266 (284)
Q Consensus 201 l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~~ 266 (284)
+.+|+++..++++.+++||++|||||+|||+++.++|+++|+||++|++|+++++++|++++.+++
T Consensus 177 ~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~~ 242 (252)
T PLN00027 177 IAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWAGPLIGGGIAGLVYELIFIGST 242 (252)
T ss_pred HHHHHHHHHHHHhcccccccccCcchhHHHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999999999999999999999999999999999999999999985433
No 10
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.2e-47 Score=334.40 Aligned_cols=225 Identities=34% Similarity=0.576 Sum_probs=193.6
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHhhhhhhhcccC-CCccCchHHHHHHHHHHHHHHHHHccCCCccCChHhhHHHHHhc
Q 023308 44 VYFSVPFMQKLMAEILGTYFMIFAGCASVVVNLNN-EKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCK 122 (284)
Q Consensus 44 ~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~-~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPAVTla~~l~g 122 (284)
...++.++|++++||+||++|++++++++++...+ +...++..+.++||+++.+.+++.+++||||+|||||+++++.|
T Consensus 25 ~~i~~~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g 104 (316)
T KOG0224|consen 25 LHIRNELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILG 104 (316)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhc
Confidence 33446899999999999999999999988764433 44556777899999999999999999999999999999999999
Q ss_pred CCCCCcccchhhhhhhHHHHHHHHHHHHhhcccccc----------------cccCCC--CcchhhHHHHHHHHHHHHHH
Q 023308 123 RFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQF----------------AGTLPA--GSNIQAFVMEFIITFYLMFV 184 (284)
Q Consensus 123 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~----------------~~~~p~--~s~~~~~~~E~~~Tf~l~~~ 184 (284)
+++|++.++|+++|++||++|++.+|.++.+....+ +.|.|. .+.+++|+.|+++|.+|+.+
T Consensus 105 ~~p~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~~ 184 (316)
T KOG0224|consen 105 RLPWKKFPVYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLVLC 184 (316)
T ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999886432222 225555 38899999999999999999
Q ss_pred Hhhhcccccc--ccchhhHHHHHHHHHHHHHhcCCccCccchhhhHHHHHhhh-----------CCCceeeeeecchHHH
Q 023308 185 ISGVATDNRA--IGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-----------QYKGLWIYIVAPPLGA 251 (284)
Q Consensus 185 i~~~~~~~~~--~~~~~~l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-----------~~~~~wvy~v~p~~Ga 251 (284)
++++ +|+|+ ...+.|+.+|+.+.+..+..+..+|..+|||||||||++.. .-.+.|+.|++|++|+
T Consensus 185 l~aI-~D~rN~~p~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl~Ga 263 (316)
T KOG0224|consen 185 LFAI-TDKRNPIPTGLHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPLIGA 263 (316)
T ss_pred eeEE-ecCCCCCCcchhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHHHHHhcchhhcccCCceeeeeehhhhhhh
Confidence 9987 56665 23578999999999999999999999999999999999951 1257899999999999
Q ss_pred HHHHHHHHHHhcCCCccc
Q 023308 252 TAGAWVYNMVRYTDKPLR 269 (284)
Q Consensus 252 ~la~~l~~~~~~~~~~~~ 269 (284)
++++++|.++...|.|++
T Consensus 264 i~G~~iY~~~Ig~h~~~~ 281 (316)
T KOG0224|consen 264 ILGGWIYDFFIGFHIPRE 281 (316)
T ss_pred hhhhhhheeeeeccCCCC
Confidence 999999999988776633
No 11
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=2.8e-45 Score=327.04 Aligned_cols=222 Identities=27% Similarity=0.418 Sum_probs=185.9
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhhhhhhhccc--CC---CccCchHHHHHHHHHHHHHHHHHccCCCccCChHhhHHHHH
Q 023308 46 FSVPFMQKLMAEILGTYFMIFAGCASVVVNLN--NE---KIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHAT 120 (284)
Q Consensus 46 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~--~~---~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPAVTla~~l 120 (284)
..++++|++++||+|||+|+++++++...... .+ ...+++.++++||+++.+.+++++++||+|+|||||++.++
T Consensus 17 ~~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~ 96 (256)
T PLN00167 17 VTRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAV 96 (256)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHH
Confidence 34578999999999999999999998663321 11 12346678999999999999999999999999999999999
Q ss_pred hcCCCCCcccchhhhhhhHHHHHHHHHHHHhhcccccccccCCCCcchhhHHHHHHHHHHHHHHHhhhcccccc-ccchh
Q 023308 121 CKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRA-IGELA 199 (284)
Q Consensus 121 ~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~p~~s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~-~~~~~ 199 (284)
.|+++|.+++.|+++|++|+++|+++++.++++.........+..+..++++.|+++|++|+++++.+..+++. .+...
T Consensus 97 ~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~~~~~~~~~~~~~~ 176 (256)
T PLN00167 97 GGHISVPTAMFYWISQMLASVMACLFLKVTTVGQHVPTYKIAEEMTGFGASVLEGVLTFGLVYTVYAAGDPRRGLLGAIG 176 (256)
T ss_pred hCCCcHhhhhHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCcc
Confidence 99999999999999999999999999988875422111111223366789999999999999999987543332 23468
Q ss_pred hHHHHHHHHHHHHHhcCCccCccchhhhHHHHHhhhCCCceeeeeecchHHHHHHHHHHHHHhcCCCc
Q 023308 200 GLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKP 267 (284)
Q Consensus 200 ~l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~~~ 267 (284)
|+.+|+++.+..+..+++||++|||||+|||+++.+.|+++|+||++|++|+++++++|++++.+...
T Consensus 177 pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~~~~~~wvywvgP~~Ga~l~a~~y~~l~~~~~~ 244 (256)
T PLN00167 177 PLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAGSFKNQAVYWVGPLLGGAVAGLLYDNVVFPTQD 244 (256)
T ss_pred hHHHHHHHHHHHHhccCCCCcccCcccchHHHHhccCccCcEEEeHHHHHHHHHHHHHHHHHhCCCcC
Confidence 99999999999999999999999999999999999899999999999999999999999999854433
No 12
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=2.6e-45 Score=326.36 Aligned_cols=216 Identities=31% Similarity=0.502 Sum_probs=184.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhc-c-cCC---CccCchHHHHHHHHHHHHHHHHHccCCCccCChHhhHHHHHhc
Q 023308 48 VPFMQKLMAEILGTYFMIFAGCASVVVN-L-NNE---KIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCK 122 (284)
Q Consensus 48 ~~~~~~~~~EfigT~~lv~~~~~~~~~~-~-~~~---~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPAVTla~~l~g 122 (284)
.+.+|++++||+|||+|+++++++.... . ..+ .....+.+++++|+.+.+.+++++++||+|+|||||+++++.|
T Consensus 15 ~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~g 94 (250)
T PLN00166 15 VASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGG 94 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhC
Confidence 4678999999999999999999976531 1 111 1123556889999999999999999999999999999999999
Q ss_pred CCCCCcccchhhhhhhHHHHHHHHHHHHhhcccccccccCCCCcchhhHHHHHHHHHHHHHHHhhhccccccc--cchhh
Q 023308 123 RFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAI--GELAG 200 (284)
Q Consensus 123 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~p~~s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~~--~~~~~ 200 (284)
+++|.+.++|+++|++|+++|+.+++.+++++.....+..+..+..++++.|+++||+|+++++.+..++++. +.+.|
T Consensus 95 ~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~~~~~~~~p 174 (250)
T PLN00166 95 NITIITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAP 174 (250)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCCCcHHHHHHHHHHHHHHHHHHHHHhcccccccccccchh
Confidence 9999999999999999999999999988754322222233445778999999999999999999876555432 34789
Q ss_pred HHHHHHHHHHHHHhcCCccCccchhhhHHHHHhhhCCCceeeeeecchHHHHHHHHHHHHHhc
Q 023308 201 LAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRY 263 (284)
Q Consensus 201 l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~ 263 (284)
+.+|+++++.++..+++||++|||||+|||+++.++|+++|+||++|++|+++|+++|+.++.
T Consensus 175 ~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~~~~~~wvywvgPi~Ga~~aa~~y~~l~~ 237 (250)
T PLN00166 175 IAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIYGDVFI 237 (250)
T ss_pred HHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999998854
No 13
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=8e-46 Score=326.49 Aligned_cols=213 Identities=43% Similarity=0.688 Sum_probs=181.9
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhhhhhhh-cccCCC-----ccCchHHHHHHHHHHHHHHHHHccCCCccCChHhhHHHH
Q 023308 46 FSVPFMQKLMAEILGTYFMIFAGCASVVV-NLNNEK-----IVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHA 119 (284)
Q Consensus 46 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~-~~~~~~-----~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPAVTla~~ 119 (284)
++.+++|++++||+||++++|+++++... ...... ..+...+++++|+++.+.+++++++||||+|||||++.+
T Consensus 3 ~~~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla~~ 82 (227)
T PF00230_consen 3 KSPSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLAFA 82 (227)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhhee
Confidence 44689999999999999999999986542 222211 124566888999999999999999999999999999999
Q ss_pred HhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhcc--cccccc--cCCCCcchhhHHHHHHHHHHHHHHHhhhccccccc
Q 023308 120 TCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEK--QDQFAG--TLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAI 195 (284)
Q Consensus 120 l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~--~~~~~~--~~p~~s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~~ 195 (284)
+.|++++.+.+.|+++|++|+++|+.+++.++++. ...... +.+..+..++++.|+++|++|+++++.+.++++..
T Consensus 83 l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~~~ 162 (227)
T PF00230_consen 83 LTGRISWKKAIVYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDKRKF 162 (227)
T ss_dssp HTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTSSS
T ss_pred eeeeecccceeeEEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhccccccc
Confidence 99999999999999999999999999999999763 122222 33455888999999999999999999987666543
Q ss_pred --cchhhHHHHHHHHHHHHHhcCCccCccchhhhHHHHHhhhCCCceeeeeecchHHHHHHHHHH
Q 023308 196 --GELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVY 258 (284)
Q Consensus 196 --~~~~~l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~la~~l~ 258 (284)
+.+.|+.+|+++.+..+..++.||++|||||+||++++...|+++|+||++|++|+++|+++|
T Consensus 163 ~~~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 163 PLGPLAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSGIWDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp TSSGGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTHHTTTTHHHHHHHHHHHHHHHHH
T ss_pred ccccccceeEEEEEeecccccccccccccCchhhcCceeecccCCeEEEEEehHHHHHHHHHhhC
Confidence 346899999999999999999999999999999999999999999999999999999999987
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=4.4e-42 Score=303.02 Aligned_cols=210 Identities=47% Similarity=0.758 Sum_probs=178.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccCC-CccCchHHHHHHHHHHHHHHHHHccCCCccCChHhhHHHHHhcCCCCCccc
Q 023308 52 QKLMAEILGTYFMIFAGCASVVVNLNNE-KIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVP 130 (284)
Q Consensus 52 ~~~~~EfigT~~lv~~~~~~~~~~~~~~-~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPAVTla~~l~g~~~~~~~~ 130 (284)
|++++||+||+++++.++++.......+ ...+...++++||+.+.+.+++++++||+|+|||+|+++++.|+++|.+.+
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~~~ 80 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIRVI 80 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccccCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHHHH
Confidence 5689999999999999999876543222 223455679999999999999999999999999999999999999999999
Q ss_pred chhhhhhhHHHHHHHHHHHHhhcccccc----------cccCC--CCcchhhHHHHHHHHHHHHHHHhhhcccccc--cc
Q 023308 131 PYILCQVLGSTLAAGTLRLLFQEKQDQF----------AGTLP--AGSNIQAFVMEFIITFYLMFVISGVATDNRA--IG 196 (284)
Q Consensus 131 ~yi~aQ~lGa~~g~~~~~~~~~~~~~~~----------~~~~p--~~s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~--~~ 196 (284)
+|+++|++|+++|+.+++.++++..... ..+.| ..+..++++.|+++|++|+++++.+..+++. ..
T Consensus 81 ~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~~~~ 160 (228)
T cd00333 81 PYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNGPPPG 160 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHccccccCCCC
Confidence 9999999999999999999886532211 11233 3377899999999999999999987654432 34
Q ss_pred chhhHHHHHHHHHHHHHhcCCccCccchhhhHHHHHhhhC---CCceeeeeecchHHHHHHHHHHHHH
Q 023308 197 ELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQ---YKGLWIYIVAPPLGATAGAWVYNMV 261 (284)
Q Consensus 197 ~~~~l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~---~~~~wvy~v~p~~Ga~la~~l~~~~ 261 (284)
...++.+|+++.+.+++.+++||+++||||+++++++.+. |+++|+||++|++|+++|+++|+++
T Consensus 161 ~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~~ 228 (228)
T cd00333 161 GLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228 (228)
T ss_pred CcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHhC
Confidence 4688999999999999999999999999999999999975 9999999999999999999999864
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=9.6e-40 Score=285.88 Aligned_cols=203 Identities=41% Similarity=0.630 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHHhhhhhhhcccC----CCc-cCchHHHHHHHHHHHHHHHHHccCCCccCChHhhHHHHHhcCCCCCccc
Q 023308 56 AEILGTYFMIFAGCASVVVNLNN----EKI-VSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVP 130 (284)
Q Consensus 56 ~EfigT~~lv~~~~~~~~~~~~~----~~~-~~~~~~al~~g~~~~~~i~~~~~iSGah~NPAVTla~~l~g~~~~~~~~ 130 (284)
+||+||++|+++++++....... +.. .....++++||+.+.+.+++++++||+|+|||||+++++.|+++|.+++
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 59999999999999986642111 111 1355689999999999999999999999999999999999999999999
Q ss_pred chhhhhhhHHHHHHHHHHHHhhcccc---ccccc-CCCCcchhhHHHHHHHHHHHHHHHhhhcccccc--ccchhhHHHH
Q 023308 131 PYILCQVLGSTLAAGTLRLLFQEKQD---QFAGT-LPAGSNIQAFVMEFIITFYLMFVISGVATDNRA--IGELAGLAVG 204 (284)
Q Consensus 131 ~yi~aQ~lGa~~g~~~~~~~~~~~~~---~~~~~-~p~~s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~--~~~~~~l~ig 204 (284)
.|+++|++|+++|+.+++.++++... ..... .+..+..++++.|+++|++|+++++....++++ .....++.+|
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~iG 160 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDPRNRVPRGGFAPLAIG 160 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecCCCCCCCCccHHHHHH
Confidence 99999999999999999988865321 11111 123477899999999999999999987543222 2236899999
Q ss_pred HHHHHHHHHhcCCccCccchhhhHHHHHhhh--CCCceeeeeecchHHHHHHHHHH
Q 023308 205 STVLLNVMFAGPITGASMNPARSLGPAIVSS--QYKGLWIYIVAPPLGATAGAWVY 258 (284)
Q Consensus 205 ~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~--~~~~~wvy~v~p~~Ga~la~~l~ 258 (284)
+.+...+++.+++||+++||||+|+++++.+ +|.++|+||++|++|+++++++|
T Consensus 161 ~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~~~~~vy~vap~~Ga~~a~~~y 216 (216)
T TIGR00861 161 LLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGWGNHWVYWVGPIIGAILGALVY 216 (216)
T ss_pred HHHHHHHHhCCCCcccccCchhhhhHHHHhccccccceeHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999987 89999999999999999999875
No 16
>PLN00184 aquaporin NIP1; Provisional
Probab=99.60 E-value=9.6e-16 Score=139.49 Aligned_cols=99 Identities=22% Similarity=0.335 Sum_probs=84.0
Q ss_pred cchhhHHHHHHHHHHHHHHHhhhcccc--cc-ccch--hhHHHHHHHHHHHHHhcCCccCccchhhhHHHHHhhh-CCCc
Q 023308 166 SNIQAFVMEFIITFYLMFVISGVATDN--RA-IGEL--AGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-QYKG 239 (284)
Q Consensus 166 s~~~~~~~E~~~Tf~l~~~i~~~~~~~--~~-~~~~--~~l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~~~ 239 (284)
+..+.+++|+++||+|++++++..... +. .... .++.+|+++++.+++.+++||+|+|||++|++++.++ .|.+
T Consensus 52 ~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~~~~ 131 (296)
T PLN00184 52 PFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPLKQ 131 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCCHHH
Confidence 467899999999999999998764221 11 1122 4677799999999999999999999999999999887 7999
Q ss_pred eeeeeecchHHHHHHHHHHHHHhcC
Q 023308 240 LWIYIVAPPLGATAGAWVYNMVRYT 264 (284)
Q Consensus 240 ~wvy~v~p~~Ga~la~~l~~~~~~~ 264 (284)
.|+||++|++|+++|+++++.++..
T Consensus 132 ~~~YiiaQllGA~lga~~~~~l~~~ 156 (296)
T PLN00184 132 VPAYVISQVIGSTLAAATLRLLFGL 156 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999998854
No 17
>PLN00026 aquaporin NIP; Provisional
Probab=99.60 E-value=1.1e-15 Score=138.94 Aligned_cols=100 Identities=22% Similarity=0.275 Sum_probs=84.6
Q ss_pred CcchhhHHHHHHHHHHHHHHHhhhcccc-ccc--cc--hhhHHHHHHHHHHHHHhcCCccCccchhhhHHHHHhhh-CCC
Q 023308 165 GSNIQAFVMEFIITFYLMFVISGVATDN-RAI--GE--LAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-QYK 238 (284)
Q Consensus 165 ~s~~~~~~~E~~~Tf~l~~~i~~~~~~~-~~~--~~--~~~l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~~ 238 (284)
.+.++.++.|+++||+|++++++....+ +.. .. ..++.+|+++++.+++.+++||+|+||||++++++.++ .|.
T Consensus 68 ~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~~~~~ 147 (298)
T PLN00026 68 VSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWK 147 (298)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCCCcHH
Confidence 3667999999999999999998643222 111 11 24589999999999999999999999999999999876 789
Q ss_pred ceeeeeecchHHHHHHHHHHHHHhcC
Q 023308 239 GLWIYIVAPPLGATAGAWVYNMVRYT 264 (284)
Q Consensus 239 ~~wvy~v~p~~Ga~la~~l~~~~~~~ 264 (284)
+.|+||++|++|+++|+++++.++.+
T Consensus 148 ~~~~YiiaQilGAi~aa~~~~~~~~~ 173 (298)
T PLN00026 148 HVPAYIAAQVSASICASFALKGVFHP 173 (298)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999998854
No 18
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.58 E-value=5.4e-15 Score=133.33 Aligned_cols=111 Identities=20% Similarity=0.281 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhcccCCCccCchHHHHHHHHHHHHHHHHHccCCCccCChHhhHHHHHhcCCCCCcc
Q 023308 50 FMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQV 129 (284)
Q Consensus 50 ~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPAVTla~~l~g~~~~~~~ 129 (284)
.++.++.|+++|++|++.+++......... . ..++.+|+.+.+.+++.+++||+|+|||+|++.++.+ .+|.+.
T Consensus 160 ~~~~~~~E~v~T~iLv~~i~~~~~~~~~~~----~-~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~-~~~~~~ 233 (274)
T PLN00183 160 CSSAFWVEFIATFIVMFLAASLTSQPQSLG----H-LSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVS-WDFKDI 233 (274)
T ss_pred HHHHHHHHHHHHHHHHHhhheeeccccCCC----C-ceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhC-CChhhe
Confidence 578899999999999998877643221111 1 1367789999999999999999999999999999987 589999
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhcccccccccCCCCc
Q 023308 130 PPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGS 166 (284)
Q Consensus 130 ~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~p~~s 166 (284)
|+||++|++|+++|+++++.++...........|+.|
T Consensus 234 wvy~vapilGailaa~l~~~l~~~~~~~~~~~~~~~~ 270 (274)
T PLN00183 234 WIYITAPTIGAVAGALMFHLLRLRTQPCSPNSSPNTS 270 (274)
T ss_pred ehHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCchh
Confidence 9999999999999999999988655544445556554
No 19
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.58 E-value=6.5e-15 Score=133.27 Aligned_cols=98 Identities=22% Similarity=0.288 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCccCchHHHHHHHHHHHHHHHHHccCCCccCChHhhHHHHHhcCCCCCc
Q 023308 49 PFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQ 128 (284)
Q Consensus 49 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPAVTla~~l~g~~~~~~ 128 (284)
+.++.++.||++|++|++++++....++.. .. ..++++|+.+++.+++.+++||+|+|||+|+++++.++ .|.+
T Consensus 157 s~~~a~~~E~l~TfiLv~~i~~~~~~~~~~---~~--~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~-~~~~ 230 (283)
T PLN00182 157 SSGQALVAEIIISFLLMFVISGVATDSRAV---GE--LAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMG-RYKG 230 (283)
T ss_pred chHHHHHHHHHHHHHHHHHHHhheeccccC---Cc--chhHHHHHHHHHHHHHccccCccccChHHHHHHHHHhc-cccc
Confidence 467899999999999999888754322111 11 15788999999999999999999999999999999865 5889
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhh
Q 023308 129 VPPYILCQVLGSTLAAGTLRLLFQ 152 (284)
Q Consensus 129 ~~~yi~aQ~lGa~~g~~~~~~~~~ 152 (284)
.|+||++|++|+++|+++++.+..
T Consensus 231 ~wvY~vap~lGA~lgally~~l~~ 254 (283)
T PLN00182 231 IWVYIVGPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999888763
No 20
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.56 E-value=1.2e-14 Score=128.31 Aligned_cols=99 Identities=19% Similarity=0.267 Sum_probs=83.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCccCchHHHHHHHHHHHHHHHHHccCCCccCChHhhHHHHHhcCC--C
Q 023308 48 VPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRF--P 125 (284)
Q Consensus 48 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPAVTla~~l~g~~--~ 125 (284)
.+.++.++.|+++|++|++.++......+. . ......++.+|+.+...+++.+++||+|+|||+|++..+.++. +
T Consensus 127 ~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~-~--~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~ 203 (228)
T cd00333 127 VSNGNAFFVEFIGTFILVLVVFATTDDPNG-P--PPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARH 203 (228)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHcccccc-C--CCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccc
Confidence 468899999999999999988876432211 0 1222367889999999999999999999999999999999988 7
Q ss_pred CCcccchhhhhhhHHHHHHHHHHH
Q 023308 126 WKQVPPYILCQVLGSTLAAGTLRL 149 (284)
Q Consensus 126 ~~~~~~yi~aQ~lGa~~g~~~~~~ 149 (284)
|.+.|+||++|++|+++|+++.+.
T Consensus 204 ~~~~~vy~vap~lGai~aa~l~~~ 227 (228)
T cd00333 204 WHYFWVYWVGPLIGAIAGALVYDY 227 (228)
T ss_pred cceeehhhhHHHHHHHHHHHHHHh
Confidence 999999999999999999987653
No 21
>PLN00166 aquaporin TIP2; Provisional
Probab=99.51 E-value=1.7e-14 Score=128.66 Aligned_cols=98 Identities=28% Similarity=0.403 Sum_probs=83.0
Q ss_pred cchhhHHHHHHHHHHHHHHHhhhccc--cc---c---c-cc-hhhHHHHHHHHHHHHHhcCCccCccchhhhHHHHHhhh
Q 023308 166 SNIQAFVMEFIITFYLMFVISGVATD--NR---A---I-GE-LAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS 235 (284)
Q Consensus 166 s~~~~~~~E~~~Tf~l~~~i~~~~~~--~~---~---~-~~-~~~l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~ 235 (284)
+..++++.|+++||+|++++++...+ +. + . .. ..++.+|+.+++.+++.+++||+++||||++++++.++
T Consensus 16 ~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~g~ 95 (250)
T PLN00166 16 ASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGN 95 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCC
Confidence 55689999999999999999986432 11 1 1 11 35788999999999999999999999999999999754
Q ss_pred -CCCceeeeeecchHHHHHHHHHHHHHhc
Q 023308 236 -QYKGLWIYIVAPPLGATAGAWVYNMVRY 263 (284)
Q Consensus 236 -~~~~~wvy~v~p~~Ga~la~~l~~~~~~ 263 (284)
.|...|+||++|++|+++|+.+++.++.
T Consensus 96 ~~~~~~~~y~~aq~lGa~~~a~~~~~~~~ 124 (250)
T PLN00166 96 ITIITGFFYWIAQCLGSIVACLLLVFVTN 124 (250)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 5888999999999999999999998864
No 22
>PLN00167 aquaporin TIP5; Provisional
Probab=99.50 E-value=3.5e-14 Score=127.09 Aligned_cols=99 Identities=21% Similarity=0.358 Sum_probs=84.7
Q ss_pred cchhhHHHHHHHHHHHHHHHhhhccccc----c------ccchhhHHHHHHHHHHHHHhcCCccCccchhhhHHHHHhhh
Q 023308 166 SNIQAFVMEFIITFYLMFVISGVATDNR----A------IGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS 235 (284)
Q Consensus 166 s~~~~~~~E~~~Tf~l~~~i~~~~~~~~----~------~~~~~~l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~ 235 (284)
+.++.++.|+++||+|++++++...+++ + .....++.+|+.+.+.+++.+++||+++|||+++++.+.++
T Consensus 20 ~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~g~ 99 (256)
T PLN00167 20 NALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVGGH 99 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHhCC
Confidence 5668999999999999999988654221 0 01247899999999999999999999999999999999865
Q ss_pred -CCCceeeeeecchHHHHHHHHHHHHHhcC
Q 023308 236 -QYKGLWIYIVAPPLGATAGAWVYNMVRYT 264 (284)
Q Consensus 236 -~~~~~wvy~v~p~~Ga~la~~l~~~~~~~ 264 (284)
.|...|+||++|++|+++|+++++.++..
T Consensus 100 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 129 (256)
T PLN00167 100 ISVPTAMFYWISQMLASVMACLFLKVTTVG 129 (256)
T ss_pred CcHhhhhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 68999999999999999999999887643
No 23
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.48 E-value=1.4e-13 Score=120.45 Aligned_cols=96 Identities=22% Similarity=0.296 Sum_probs=79.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCccCchHHHHHHHHHHHHHHHHHccCCCccCChHhhHHHHHhc-CCCC
Q 023308 48 VPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCK-RFPW 126 (284)
Q Consensus 48 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPAVTla~~l~g-~~~~ 126 (284)
.+.++.++.|+++|++|++..+.....+ +... .....++.+|+.+...+++.+++||+|+|||+|++..+.+ ..+|
T Consensus 119 ~~~~~~~~~E~i~T~~lv~~~~~~~~~~-~~~~--~~~~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~ 195 (216)
T TIGR00861 119 VSSGQAFFVEFIGTAILVLVIFATTDPR-NRVP--RGGFAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGW 195 (216)
T ss_pred ccHHHHHHHHHHHHHHHHHHHheeecCC-CCCC--CCccHHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhccccc
Confidence 3678999999999999999888754321 1111 1113688899999999999999999999999999999976 5789
Q ss_pred CcccchhhhhhhHHHHHHHH
Q 023308 127 KQVPPYILCQVLGSTLAAGT 146 (284)
Q Consensus 127 ~~~~~yi~aQ~lGa~~g~~~ 146 (284)
.+.|+|+++|++|+++|+.+
T Consensus 196 ~~~~vy~vap~~Ga~~a~~~ 215 (216)
T TIGR00861 196 GNHWVYWVGPIIGAILGALV 215 (216)
T ss_pred cceeHHHHHHHHHHHHHHHh
Confidence 99999999999999999865
No 24
>PLN00027 aquaporin TIP; Provisional
Probab=99.45 E-value=1.1e-13 Score=123.71 Aligned_cols=98 Identities=24% Similarity=0.346 Sum_probs=81.9
Q ss_pred cchhhHHHHHHHHHHHHHHHhhhcc------cccc--ccc--hhhHHHHHHHHHHHHHhcCCccCccchhhhHHHHHhhh
Q 023308 166 SNIQAFVMEFIITFYLMFVISGVAT------DNRA--IGE--LAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS 235 (284)
Q Consensus 166 s~~~~~~~E~~~Tf~l~~~i~~~~~------~~~~--~~~--~~~l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~ 235 (284)
...+.++.|+++||+|++++++... ++++ ... ..++.+|+.+.+.+++.+++||+++|||+++++.+.++
T Consensus 18 ~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g~ 97 (252)
T PLN00027 18 DALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGGN 97 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhCC
Confidence 4568899999999999999987531 1111 111 46899999999999999999999999999999998665
Q ss_pred -CCCceeeeeecchHHHHHHHHHHHHHhc
Q 023308 236 -QYKGLWIYIVAPPLGATAGAWVYNMVRY 263 (284)
Q Consensus 236 -~~~~~wvy~v~p~~Ga~la~~l~~~~~~ 263 (284)
.|...|+||++|++|+++|+++++++..
T Consensus 98 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~ 126 (252)
T PLN00027 98 ITLLRGILYWIAQLLGSVVACLLLKFSTG 126 (252)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5888999999999999999999987753
No 25
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.45 E-value=1e-13 Score=126.50 Aligned_cols=99 Identities=31% Similarity=0.440 Sum_probs=84.0
Q ss_pred cchhhHHHHHHHHHHHHHHHhhhcccccc---c--cchhhHHHHHHHHHHHHHhcCCccCccchhhhHHHHHhhh-CCCc
Q 023308 166 SNIQAFVMEFIITFYLMFVISGVATDNRA---I--GELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-QYKG 239 (284)
Q Consensus 166 s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~---~--~~~~~l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~~~ 239 (284)
+..+.+++|+++||++++++++...+... . ....++.+|+.+.+.+++.+++||+|+|||+++++++.++ .|..
T Consensus 48 ~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~~~~ 127 (294)
T PTZ00016 48 PNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWKK 127 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCCHHH
Confidence 44578999999999999998886433211 1 1235788999999999999999999999999999999887 7999
Q ss_pred eeeeeecchHHHHHHHHHHHHHhcC
Q 023308 240 LWIYIVAPPLGATAGAWVYNMVRYT 264 (284)
Q Consensus 240 ~wvy~v~p~~Ga~la~~l~~~~~~~ 264 (284)
.|+||++|++|+++|+++.+.++++
T Consensus 128 ~~~YiiaQ~lGa~~ga~ll~~~~~~ 152 (294)
T PTZ00016 128 LPGYFVAQLLGAFVGAACVYGLYYG 152 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 9999999999999999998888754
No 26
>PRK05420 aquaporin Z; Provisional
Probab=99.44 E-value=1.4e-13 Score=121.61 Aligned_cols=97 Identities=33% Similarity=0.350 Sum_probs=80.7
Q ss_pred hhhHHHHHHHHHHHHHHHhhhccc----cccc-cc-hhhHHHHHHHHHHHHHhcCCccCccchhhhHHHHHhhh-CCCce
Q 023308 168 IQAFVMEFIITFYLMFVISGVATD----NRAI-GE-LAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-QYKGL 240 (284)
Q Consensus 168 ~~~~~~E~~~Tf~l~~~i~~~~~~----~~~~-~~-~~~l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~~~~ 240 (284)
.|.++.|+++|++|+++.+..... ++.. +. ..++.+|+.+.+.+++.+++||+|+|||+++++.+.++ +|.+.
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~ 81 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKEL 81 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHHh
Confidence 478999999999999988774321 1111 12 24799999999999999999999999999999999875 79999
Q ss_pred eeeeecchHHHHHHHHHHHHHhcC
Q 023308 241 WIYIVAPPLGATAGAWVYNMVRYT 264 (284)
Q Consensus 241 wvy~v~p~~Ga~la~~l~~~~~~~ 264 (284)
|+||++|++|+++|+.+.+.+++.
T Consensus 82 ~~Y~~aQ~lGa~~ga~l~~~~~~~ 105 (231)
T PRK05420 82 VPYIIAQVVGGIAAAAVLYLIASG 105 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999887777643
No 27
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.40 E-value=5.5e-13 Score=117.54 Aligned_cols=100 Identities=25% Similarity=0.343 Sum_probs=84.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCccCchHHHHHHHHHHHHHHHHHccCCCccCChHhhHHHHHhcCCCCC
Q 023308 48 VPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWK 127 (284)
Q Consensus 48 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPAVTla~~l~g~~~~~ 127 (284)
.+.++.++.|++.||.|++..++.....+.+ ...++.+|+.+.+.+++.+++||+++|||++++.++..+. |.
T Consensus 129 ~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~------~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~~-w~ 201 (238)
T KOG0223|consen 129 LSTGQGLVIEIILTFILVFTVFATATDPRRS------ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYGS-WD 201 (238)
T ss_pred CCcchhHHHHHHHHHHHhheeEEEeecCCCc------ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhcC-CC
Confidence 3567899999999999999877633222222 2357888999999999999999999999999999998874 99
Q ss_pred cccchhhhhhhHHHHHHHHHHHHhhcc
Q 023308 128 QVPPYILCQVLGSTLAAGTLRLLFQEK 154 (284)
Q Consensus 128 ~~~~yi~aQ~lGa~~g~~~~~~~~~~~ 154 (284)
.+|+||++|++|+++++++.+.++..+
T Consensus 202 ~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 202 DHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred cEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 999999999999999999999888644
No 28
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.35 E-value=6.4e-13 Score=118.60 Aligned_cols=99 Identities=30% Similarity=0.431 Sum_probs=83.4
Q ss_pred cchhhHHHHHHHHHHHHHHHhhhccccc----cccc--hhhHHHHHHHHHHHHHhcCCccCccchhhhHHHHHhhh-CCC
Q 023308 166 SNIQAFVMEFIITFYLMFVISGVATDNR----AIGE--LAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-QYK 238 (284)
Q Consensus 166 s~~~~~~~E~~~Tf~l~~~i~~~~~~~~----~~~~--~~~l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~~ 238 (284)
...|.+++||++|++|++..+++..+.. ..+. ...+.+|+.+++.+++++.+||+|+|||++|+..++++ .|.
T Consensus 30 ~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~~p~~ 109 (316)
T KOG0224|consen 30 ELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGRLPWK 109 (316)
T ss_pred HHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcCCChh
Confidence 4678899999999999999887643321 1122 34589999999999999999999999999999999987 799
Q ss_pred ceeeeeecchHHHHHHHHHHHHHhcC
Q 023308 239 GLWIYIVAPPLGATAGAWVYNMVRYT 264 (284)
Q Consensus 239 ~~wvy~v~p~~Ga~la~~l~~~~~~~ 264 (284)
++.+|.++|++|+++++.....+|++
T Consensus 110 k~p~Y~~aQ~iGAF~gaa~~y~~y~d 135 (316)
T KOG0224|consen 110 KFPVYVLAQFIGAFLGAATVYGLYYD 135 (316)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999887766654
No 29
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.33 E-value=1.4e-12 Score=114.82 Aligned_cols=102 Identities=31% Similarity=0.416 Sum_probs=84.7
Q ss_pred hhhHHHHHHHHHHHHHHHhhhccc----c---cccc-chhhHHHHHHHHHHHHHhcCCccCccchhhhHHHHHhhh-CCC
Q 023308 168 IQAFVMEFIITFYLMFVISGVATD----N---RAIG-ELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-QYK 238 (284)
Q Consensus 168 ~~~~~~E~~~Tf~l~~~i~~~~~~----~---~~~~-~~~~l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~~ 238 (284)
.+.+++||++|++|++...++... + ...+ ....+.+|+.+.+.+++.+++||+|+|||++++.++.++ +|+
T Consensus 5 ~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp~~ 84 (241)
T COG0580 5 TKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFPWR 84 (241)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCCHH
Confidence 456899999999999998775421 1 1112 236799999999999999999999999999999999887 789
Q ss_pred ceeeeeecchHHHHHHHHHHHHHhcCCCccc
Q 023308 239 GLWIYIVAPPLGATAGAWVYNMVRYTDKPLR 269 (284)
Q Consensus 239 ~~wvy~v~p~~Ga~la~~l~~~~~~~~~~~~ 269 (284)
....||++|++|+++++.+...+++++..+.
T Consensus 85 ~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~ 115 (241)
T COG0580 85 KVLPYIVAQVLGAFAGAALLYLLYYGKILET 115 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhHhh
Confidence 9999999999999999998888887654433
No 30
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.07 E-value=4.7e-10 Score=98.76 Aligned_cols=96 Identities=23% Similarity=0.320 Sum_probs=76.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCccCchHHHHHHHHHHHHHHHHHccCCCccCChHhhHHHHHhcCCCCC
Q 023308 48 VPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWK 127 (284)
Q Consensus 48 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPAVTla~~l~g~~~~~ 127 (284)
.+..+.++.|+++|++|++.........+... .+. ..++.+|+.+.+..+..+..+|+.+|||++++..+.... |.
T Consensus 132 ~s~~~~~~~E~~~t~il~~~i~~~~~~~~~~~--~~~-~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~-~~ 207 (227)
T PF00230_consen 132 ISLGQAFFSEFIGTFILVLVILAVADDKRKFP--LGP-LAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSGI-WD 207 (227)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTSTTSSST--SSG-GHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTH-HT
T ss_pred chhhhhhhhhhhhhhHHHhhhhhhcccccccc--ccc-ccceeEEEEEeecccccccccccccCchhhcCceeeccc-CC
Confidence 35788999999999999997765433222111 111 247778888888888899999999999999999998765 88
Q ss_pred cccchhhhhhhHHHHHHHHH
Q 023308 128 QVPPYILCQVLGSTLAAGTL 147 (284)
Q Consensus 128 ~~~~yi~aQ~lGa~~g~~~~ 147 (284)
..|+||+++++|+++|++++
T Consensus 208 ~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 208 YFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp TTTHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEehHHHHHHHHHhhC
Confidence 99999999999999999753
No 31
>PRK10805 formate transporter; Provisional
Probab=95.20 E-value=0.23 Score=45.44 Aligned_cols=96 Identities=14% Similarity=0.197 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHHccC-CCccCChHhhHHHHHhcCCCCCcccc----hhhhhhhHHHHHHHHHHHHhhc--ccccccc
Q 023308 88 SIVWGLVVMVLVYSLGHI-SGAHFNPSVTIAHATCKRFPWKQVPP----YILCQVLGSTLAAGTLRLLFQE--KQDQFAG 160 (284)
Q Consensus 88 al~~g~~~~~~i~~~~~i-SGah~NPAVTla~~l~g~~~~~~~~~----yi~aQ~lGa~~g~~~~~~~~~~--~~~~~~~ 160 (284)
++.+.+++.++++.-+.. +| |-..+++ .+.|+.++.+.+- =.++-++|+++-+.+++..-.. .......
T Consensus 72 ~~~F~vGlilIvl~g~eLFTg---n~l~~~~-~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s~~~~~~~~~~~~ 147 (285)
T PRK10805 72 GICFSLGLILCVVCGADLFTS---TVLIVVA-KASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGL 147 (285)
T ss_pred HHHHHHHHHHHHHhCcccchh---hHHHHHH-HHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCccHHHH
Confidence 455555555554443333 44 6555544 5678888888773 3445556665555544321100 0000000
Q ss_pred -------cCCCCcchhhHHHHHHHHHHHHHHHhh
Q 023308 161 -------TLPAGSNIQAFVMEFIITFYLMFVISG 187 (284)
Q Consensus 161 -------~~p~~s~~~~~~~E~~~Tf~l~~~i~~ 187 (284)
.--..+..+.|+--.+|.++..+.++.
T Consensus 148 ~~~~~a~~K~~~~~~~~f~~gI~CN~lVclaV~~ 181 (285)
T PRK10805 148 NVLQTADHKVHHTFIEAVCLGILANLMVCLAVWM 181 (285)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 001235667777777888888877774
No 32
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=94.09 E-value=0.54 Score=42.37 Aligned_cols=179 Identities=16% Similarity=0.162 Sum_probs=87.0
Q ss_pred CchHHHHHHHHHHHHHHHHHccCCCccCChHhhHHHHHhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhccc-----cc
Q 023308 83 SLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQ-----DQ 157 (284)
Q Consensus 83 ~~~~~al~~g~~~~~~i~~~~~iSGah~NPAVTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~-----~~ 157 (284)
..+.-++.+++++.+++++-+..--+ |--........++++|++.+--|+-=.+|=++|++++.+++.-.. +.
T Consensus 63 ~~lvg~~~F~~GLilVv~~g~ELfT~--n~m~~t~~~~~k~Is~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~~ 140 (265)
T COG2116 63 AKLVGGLVFSLGLILVVIAGSELFTS--NTMLLTVGVLSKKISWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTANG 140 (265)
T ss_pred HHHHHHHHHHHHHHHhhhhCcccccc--chhHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 34445666777776666665443211 322223334568899888877666666666666665555442111 00
Q ss_pred ccc-----cC---CCCcchhhHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHhcCCccCccchhhhHH
Q 023308 158 FAG-----TL---PAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLG 229 (284)
Q Consensus 158 ~~~-----~~---p~~s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~~~~~~~l~ig~~v~~~~~~~~~~tG~~lNPAr~lg 229 (284)
..+ .. -..+..+.|+--.++.++..+.++..-.-|...... +.+-+-+++ ++..++.=...|-..-.-
T Consensus 141 ~~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAvwm~~~~k~~~~K~--~~m~~pv~~--Fv~~GfeH~VANm~~i~~ 216 (265)
T COG2116 141 QWGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCLAVWMSYSAKDGAAKI--FAIILPVML--FVASGFEHSVANMFMIPW 216 (265)
T ss_pred hhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHhcccchhhHH--HHHHHHHHH--HHHcCCceeeehHHHHHH
Confidence 110 00 012456677777778888877777542212211112 222233333 233333323445322211
Q ss_pred HHHhhh--CCCc----eeee-eecchHH-HHHHHHHHHHHhcCCCc
Q 023308 230 PAIVSS--QYKG----LWIY-IVAPPLG-ATAGAWVYNMVRYTDKP 267 (284)
Q Consensus 230 ~~l~~~--~~~~----~wvy-~v~p~~G-a~la~~l~~~~~~~~~~ 267 (284)
.+...+ +|.+ .+++ .+|.++| +++-++.|++++.++.+
T Consensus 217 ~~~~~~~~~~~~fi~~Nlipv~lGNivGG~v~vgl~Y~~~~~~~~~ 262 (265)
T COG2116 217 AAVFSGALTWADFILKNLIPVTLGNIVGGAVFVGLMYWYLYRKQNR 262 (265)
T ss_pred HHHcCChhhhHHHHHHHHHHHHHhchhcchhhhhHHHHHhcccccc
Confidence 222221 3433 1222 2566665 56778888888755443
No 33
>PRK11562 nitrite transporter NirC; Provisional
Probab=91.76 E-value=2.2 Score=38.67 Aligned_cols=170 Identities=8% Similarity=0.054 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHccC-CCccCChHhhHHHHHhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhcc---ccc----cc
Q 023308 88 SIVWGLVVMVLVYSLGHI-SGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEK---QDQ----FA 159 (284)
Q Consensus 88 al~~g~~~~~~i~~~~~i-SGah~NPAVTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~---~~~----~~ 159 (284)
+..+++++.++++.-+.. +| |=.......+.|+.++++.+-.|.-=++|=++|++++.+++... ... ..
T Consensus 62 g~~F~~GLilVi~~G~eLFTg---n~~~~~~~~~~~~~s~~~~lr~w~iv~~GNliGa~~~A~l~~~~~~~~~~~~~~~~ 138 (268)
T PRK11562 62 GATFGIALTLVIIAGSELFTG---HTMFLTFGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSIV 138 (268)
T ss_pred HHHHHHHHHHHHHhCcccccc---chHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHH
Confidence 445555555554443332 22 43333345567888887776655555555555555444433210 000 00
Q ss_pred c----cCCCCcchhhHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHhcCCccCccchhhhHHHHHhhh
Q 023308 160 G----TLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS 235 (284)
Q Consensus 160 ~----~~p~~s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~~~~~~~l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~ 235 (284)
. .--..+..+.|+--.+|.++..+.++.... .+..+....+.+. +++.+. .++.=...|=- -+...++..
T Consensus 139 ~~ia~~K~~~~~~~~f~~gI~CNwLVclavw~~~~-~~~~gKi~~i~~p--I~~Fv~--~GFEH~IANm~-~~~l~~~~~ 212 (268)
T PRK11562 139 HSVALAKTTAPAMVLFFKGALCNWLVCLAIWMAIR-TEGAAKFIAIWWC--LLAFIA--SGYEHSVANMT-LFALSWFGH 212 (268)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHHHHH--HHHHHH--cCCcchhHhHH-HHHHHHHcc
Confidence 0 001125566777777888888777765422 2222223333322 222222 22211233411 122222211
Q ss_pred C--------CCceee-eeecchHHH-HHHHHHHHHHhcCCC
Q 023308 236 Q--------YKGLWI-YIVAPPLGA-TAGAWVYNMVRYTDK 266 (284)
Q Consensus 236 ~--------~~~~wv-y~v~p~~Ga-~la~~l~~~~~~~~~ 266 (284)
. +-+.++ =.+|.++|+ ++-++.|++++.++.
T Consensus 213 ~~~~~~~~~~~~nlipvtLGNivGG~v~vg~~y~~~~~~~~ 253 (268)
T PRK11562 213 HSEAYTLAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKAN 253 (268)
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 0 111223 347888887 577788887775443
No 34
>PRK09713 focB putative formate transporter; Provisional
Probab=89.53 E-value=5.3 Score=36.45 Aligned_cols=98 Identities=5% Similarity=0.009 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHHccCCCccCChHhhHHHHHhcCCCCCcccc----hhhhhhhHHHHHHHHHHHHhh--cccccccc-
Q 023308 88 SIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPP----YILCQVLGSTLAAGTLRLLFQ--EKQDQFAG- 160 (284)
Q Consensus 88 al~~g~~~~~~i~~~~~iSGah~NPAVTla~~l~g~~~~~~~~~----yi~aQ~lGa~~g~~~~~~~~~--~~~~~~~~- 160 (284)
++.+.+++.++++.-+..-=+ |=. ++.....|+.+|++.+- =+++-++|+++-+++++..-. .+......
T Consensus 71 g~~F~vGLilIv~~g~ELfTg--N~~-~~~~~~~~~i~~~~~l~~w~iv~~GNlvGal~~A~l~~~s~~~~~~~~~~~~~ 147 (282)
T PRK09713 71 GLCFTLGFILLAVCGTSLFTS--SVM-TVMAKSRGVISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMSENAMWGVA 147 (282)
T ss_pred HHHHHHHHHHHHHhCccccHH--HHH-HHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhHHHH
Confidence 455555555555543333112 222 22234578888877773 345566666665555432111 00000000
Q ss_pred ------cCCCCcchhhHHHHHHHHHHHHHHHhhh
Q 023308 161 ------TLPAGSNIQAFVMEFIITFYLMFVISGV 188 (284)
Q Consensus 161 ------~~p~~s~~~~~~~E~~~Tf~l~~~i~~~ 188 (284)
.--..+..+.|+--.+|.++..+.++..
T Consensus 148 ~~~ia~~K~~~~~~~~F~~gI~CN~lVclaV~~~ 181 (282)
T PRK09713 148 VLHCAEGKMHHTFTESVSLGIMCNLMVCLALWMS 181 (282)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0012366778888888999888888753
No 35
>TIGR00790 fnt formate/nitrite transporter. symport. HCO2 - efflux may be driven by the membrane potential by a uniport mechanism or by H+ antiport.
Probab=85.03 E-value=8.9 Score=34.03 Aligned_cols=77 Identities=12% Similarity=0.185 Sum_probs=40.3
Q ss_pred ChHhhHHHHHhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhc-----ccc-cccc-------cCCCCcchhhHHHHHHH
Q 023308 111 NPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQE-----KQD-QFAG-------TLPAGSNIQAFVMEFII 177 (284)
Q Consensus 111 NPAVTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~-----~~~-~~~~-------~~p~~s~~~~~~~E~~~ 177 (284)
|-......++.|+.+|.+.+-.|.-=++|=++|+.++-.+... ... .... .--..+..+.|+--+++
T Consensus 68 n~~~~~~~~~~~~~~~~~~l~~w~~~~~gNlvG~~~~a~l~~~~~~~~~~~~~~~~~~~~~a~~K~~~~~~~~f~~gilc 147 (239)
T TIGR00790 68 NTLFVTMALLRGKISWGDLLINWVVSWLGNLVGALFVAYLFSYLGGILTANGPWGVGSLAIAEHKAHHTFVEAFFLGILC 147 (239)
T ss_pred chHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCccHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 4333334466788888777766555555555555544433311 011 0100 00122556667777777
Q ss_pred HHHHHHHHhh
Q 023308 178 TFYLMFVISG 187 (284)
Q Consensus 178 Tf~l~~~i~~ 187 (284)
.+++.+.++.
T Consensus 148 n~lV~lav~~ 157 (239)
T TIGR00790 148 NWLVCLAVWM 157 (239)
T ss_pred HHHHHHHHHH
Confidence 7777776654
No 36
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=79.35 E-value=13 Score=33.20 Aligned_cols=100 Identities=15% Similarity=0.161 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHHccCCCccCChHhhHHHHHhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhcccc-----cccc-
Q 023308 87 ISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQD-----QFAG- 160 (284)
Q Consensus 87 ~al~~g~~~~~~i~~~~~iSGah~NPAVTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~-----~~~~- 160 (284)
.++.+++++.++++.-+..- -=|-......++.|+.+|++.+--|.-=++|=++|++++-.+...... ....
T Consensus 60 ~g~~F~~Gl~lIv~~g~eLf--Tgn~~~~~~~~~~~~~~~~~~l~~w~~v~~gNliG~~~~a~l~~~~~~~~~~~~~~~~ 137 (250)
T PF01226_consen 60 GGLVFPIGLVLIVFLGGELF--TGNMMVMTLALLNKRISWKKLLRNWGIVYLGNLIGALLFAYLFAFSGGFMSSPAMGEY 137 (250)
T ss_dssp HHHHHTHHHHHHHHHT---T--TTTCHHHHHHHCTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTGGGTTTHHHHH
T ss_pred HHHHHHHHHHHHHHhcchhc--ccchHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccHHHHHH
Confidence 45555556655555544432 226565556677788888887655555555555555544443321110 0000
Q ss_pred ------cCCCCcchhhHHHHHHHHHHHHHHHhhh
Q 023308 161 ------TLPAGSNIQAFVMEFIITFYLMFVISGV 188 (284)
Q Consensus 161 ------~~p~~s~~~~~~~E~~~Tf~l~~~i~~~ 188 (284)
.--..+..+.|+--.++.++..+.++..
T Consensus 138 ~~~~a~~K~~~~~~~~f~~gI~cN~lVclav~~~ 171 (250)
T PF01226_consen 138 LISVAEHKVSHTFWELFFRGILCNWLVCLAVWLA 171 (250)
T ss_dssp HHHHHHCCSSS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112366777888888888888888764
No 37
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=74.32 E-value=55 Score=32.99 Aligned_cols=135 Identities=16% Similarity=0.193 Sum_probs=71.5
Q ss_pred HHHHccCCCccCC---hHhhHHHHHhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhcccccccccCCCCcchhhHHHHH
Q 023308 99 VYSLGHISGAHFN---PSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEF 175 (284)
Q Consensus 99 i~~~~~iSGah~N---PAVTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~p~~s~~~~~~~E~ 175 (284)
+++.-..++|+.- .+|+.+.+-....|......++.+.++|+.+|.++.+.+++.-. . +.++
T Consensus 356 ~Wi~t~W~~G~~~~~~~~v~~~lfa~~~~P~~~~~~~~~G~l~~~~~a~~~~~~vlP~~~--------------~-f~~L 420 (650)
T PF04632_consen 356 FWIATGWPSGATAVMMAAVVSSLFATLDNPAPALRLFLIGALLGAVLAFLYLFFVLPHLD--------------G-FPLL 420 (650)
T ss_pred HHHHcCCChhHHHHHHHHHHHHHHcCCcChHHHHHHHHHHHHHHHHHHHHHHHHhhhccC--------------c-HHHH
Confidence 3343344445443 33333334444557788888999999999999988887776321 1 1122
Q ss_pred HHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHhcCCccCccchhhhHHHHHhhhCCCceeeeeecchHHHHHHH
Q 023308 176 IITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGA 255 (284)
Q Consensus 176 ~~Tf~l~~~i~~~~~~~~~~~~~~~l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~la~ 255 (284)
+..+...+++.+....+ +.......++.+...... +.......|++.-+-. .++.++|.+++.
T Consensus 421 ~l~l~~~l~~~~~~~~~---p~~~~~g~~~~v~f~~~~-~~~n~~~~d~~~f~n~-------------~la~l~G~~~a~ 483 (650)
T PF04632_consen 421 ALVLAPFLFLGGLLMAR---PRTAYIGLGFAVFFLLLL-GPGNPYSYDFATFLNR-------------ALAILLGIVIAA 483 (650)
T ss_pred HHHHHHHHHHHHHHHcC---chHHHHHHHHHHHHHHHh-cCCCCCCCCHHHHHHH-------------HHHHHHHHHHHH
Confidence 22222111111111111 223445555555544333 2222344555443322 256788999999
Q ss_pred HHHHHHhcCC
Q 023308 256 WVYNMVRYTD 265 (284)
Q Consensus 256 ~l~~~~~~~~ 265 (284)
+.+.++.+..
T Consensus 484 l~~~li~p~~ 493 (650)
T PF04632_consen 484 LVFRLIRPFS 493 (650)
T ss_pred HHHHHHCCCC
Confidence 9999887654
No 38
>PRK10631 p-hydroxybenzoic acid efflux subunit AaeB; Provisional
Probab=46.14 E-value=2.7e+02 Score=28.65 Aligned_cols=124 Identities=13% Similarity=0.054 Sum_probs=68.3
Q ss_pred ccCChHhhHHHHHhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhcccccccccCCCCcchhhHHHHHHHHHHHHHHHhh
Q 023308 108 AHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISG 187 (284)
Q Consensus 108 ah~NPAVTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~p~~s~~~~~~~E~~~Tf~l~~~i~~ 187 (284)
+-+..||..+++..-..|..-..-+..++++|..+|.+....+++.-. + .-.+++=.++.+++ +.+
T Consensus 381 a~~~aAV~~~LfA~~~nP~~~~~~fl~Gtl~a~~~a~l~~f~vLP~i~----------~-~f~lL~laLap~~~---~~g 446 (652)
T PRK10631 381 AMVMIAVVTSLAMRLPNPRMVAIDFLYGTLAALPLGALYFMVIIPNTQ----------Q-SMLLLCISLGVLGF---FIG 446 (652)
T ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----------c-cHHHHHHHHHHHHH---HHH
Confidence 467777777777776667666777888889999998888777775311 1 01122222222221 222
Q ss_pred hccccccccchhhHHHHHHHHHHHHHhcCCccCccchhhhHHHHHhhhCCCceeeeeecchHHHHHHHHHHHHHhcC
Q 023308 188 VATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYT 264 (284)
Q Consensus 188 ~~~~~~~~~~~~~l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~ 264 (284)
.-..++ ....+|+.+..+.+..- ..-...||+.-+-.. ++.++|.++|.+.+.++.+.
T Consensus 447 ~~~~~~-----~~~~lg~~i~f~~~l~l-~n~~~~d~~~FlN~a-------------lA~v~Gi~~A~l~f~lirp~ 504 (652)
T PRK10631 447 IEVQKR-----RLGSLGALASTINILVL-DNPMTFHFSQFLDSA-------------LGQIVGCFLALIVILLVRDN 504 (652)
T ss_pred HHhccc-----HHHHHHHHHHHHHHhcc-CCCCCcCHHHHHHHH-------------HHHHHHHHHHHHHHHHhCCC
Confidence 111112 11245666655433322 122334544433222 57888999999999776544
No 39
>PF01384 PHO4: Phosphate transporter family; InterPro: IPR001204 The PHO-4 family of transporters includes the phosphate-repressible phosphate permease (PHO-4) from Neurospora crassa which is probably a sodium-phosphate symporter []. This family also includes the human leukemia virus receptor.; GO: 0005315 inorganic phosphate transmembrane transporter activity, 0006817 phosphate ion transport, 0016020 membrane
Probab=44.16 E-value=2.4e+02 Score=26.21 Aligned_cols=56 Identities=14% Similarity=0.252 Sum_probs=33.7
Q ss_pred hhhHHHHHHHHHHHHHhcCCccCccchhhhHHHHHhhhCCCceeeeeecchHHHHHHHHHHHHHhcC
Q 023308 198 LAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYT 264 (284)
Q Consensus 198 ~~~l~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~ 264 (284)
...-.+|..+++.....+ -...|....+..-+. ..++.|++|.+++.++|+++...
T Consensus 92 tThalvGal~G~~l~~~g---~~~v~w~~~~~~I~~--------~wv~sPlia~~~a~~l~~~~~~~ 147 (326)
T PF01384_consen 92 TTHALVGALIGAGLASGG---FSAVNWSKGLLKIVL--------SWVISPLIAFILAYILYRLIRRI 147 (326)
T ss_pred HHHHHHHHHHHHHHHHhh---hhhchHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 444566666665544332 134565522222222 14689999999999999988643
No 40
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=34.47 E-value=11 Score=29.52 Aligned_cols=21 Identities=24% Similarity=0.287 Sum_probs=17.7
Q ss_pred ccCCCccCChHhhHHHHHhcC
Q 023308 103 GHISGAHFNPSVTIAHATCKR 123 (284)
Q Consensus 103 ~~iSGah~NPAVTla~~l~g~ 123 (284)
..-|+||+||.+.++-.+..+
T Consensus 5 ~~Gt~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 5 TGGTRGHVYPFLALARALRRR 25 (139)
T ss_dssp EESSHHHHHHHHHHHHHHHHT
T ss_pred EcCChhHHHHHHHHHHHHhcc
Confidence 445789999999999999764
No 41
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=33.94 E-value=9.1 Score=35.83 Aligned_cols=22 Identities=23% Similarity=0.218 Sum_probs=18.8
Q ss_pred HHccCCCccCChHhhHHHHHhc
Q 023308 101 SLGHISGAHFNPSVTIAHATCK 122 (284)
Q Consensus 101 ~~~~iSGah~NPAVTla~~l~g 122 (284)
+.+.-+|||+.||+.++-.+..
T Consensus 6 ~~~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 6 FTGGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred EEcCCcHHHHHHHHHHHHHHHh
Confidence 4567799999999999988874
No 42
>COG0306 PitA Phosphate/sulphate permeases [Inorganic ion transport and metabolism]
Probab=33.07 E-value=1.8e+02 Score=27.21 Aligned_cols=23 Identities=22% Similarity=0.515 Sum_probs=19.6
Q ss_pred eeecchHHHHHHHHHHHHHhcCC
Q 023308 243 YIVAPPLGATAGAWVYNMVRYTD 265 (284)
Q Consensus 243 y~v~p~~Ga~la~~l~~~~~~~~ 265 (284)
+++.|++|..++.++|+.++...
T Consensus 139 wvlsPii~~~ia~~l~~~~~~~~ 161 (326)
T COG0306 139 WVLSPILGGVLAYLLYSLLRRLI 161 (326)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999999999999887543
No 43
>COG1289 Predicted membrane protein [Function unknown]
Probab=30.53 E-value=1.8e+02 Score=29.83 Aligned_cols=27 Identities=30% Similarity=0.303 Sum_probs=15.4
Q ss_pred CCCcccchhhhhhhHHHHHHHHHHHHh
Q 023308 125 PWKQVPPYILCQVLGSTLAAGTLRLLF 151 (284)
Q Consensus 125 ~~~~~~~yi~aQ~lGa~~g~~~~~~~~ 151 (284)
+..+..-++.+=++|.++|.++.+...
T Consensus 399 t~~r~~~ri~GTllg~~~g~~~l~~~~ 425 (674)
T COG1289 399 TRQRARQRILGTLLGLLLGLLVLLLLL 425 (674)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344555556666666666666555443
No 44
>PRK14206 camphor resistance protein CrcB; Provisional
Probab=29.18 E-value=2.9e+02 Score=21.87 Aligned_cols=108 Identities=13% Similarity=0.042 Sum_probs=54.4
Q ss_pred hhHHHHHHHHHHHHhhcccccccccCCCCcchhhHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHhcC
Q 023308 137 VLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGP 216 (284)
Q Consensus 137 ~lGa~~g~~~~~~~~~~~~~~~~~~~p~~s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~~~~~~~l~ig~~v~~~~~~~~~ 216 (284)
.+|+.+|+.+=|. ........ .+..-++..+..-.+++|++-++......+++. .....+...+.++ ..|.
T Consensus 7 ~~Gg~lGa~~Ry~-l~~~~~~~---~~~~fp~gTl~vNi~GsfllG~~~~~~~~~~~~-~~~~~~~~~l~tG----f~Gg 77 (127)
T PRK14206 7 ALGSALGGTLRFW-LSGLVAEA---TGGTFPWGTLVINVSGSFLIGFFATLTGPEGRV-FVGESWRLFVMVG----VCGG 77 (127)
T ss_pred HHhHHHHHHHHHH-HHHHHhhc---ccCCCchHHHHHHHHHHHHHHHHHHHHhhcccc-cCCHHHHHHHHHH----Hccc
Confidence 4788888874333 32111111 111223457889999999997665332111111 0111222222222 2344
Q ss_pred CccCccchhhhHHHHHh----hhCCCceeeeeecchHHHHHHHHHH
Q 023308 217 ITGASMNPARSLGPAIV----SSQYKGLWIYIVAPPLGATAGAWVY 258 (284)
Q Consensus 217 ~tG~~lNPAr~lg~~l~----~~~~~~~wvy~v~p~~Ga~la~~l~ 258 (284)
.|-. -++....+ .++|.....|++..++++++++++=
T Consensus 78 fTTF-----STf~~e~~~l~~~~~~~~a~~y~~~s~~~gl~a~~~G 118 (127)
T PRK14206 78 FTTF-----SSFSLQTLNLARDGDWLRAGGNVVLSVVFCLLAVWLG 118 (127)
T ss_pred cccH-----HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4311 12222222 2456566689999999999988763
No 45
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=26.03 E-value=57 Score=32.12 Aligned_cols=28 Identities=25% Similarity=0.466 Sum_probs=24.5
Q ss_pred ceeeeeecchHHHHHHHHHHHHHhcCCC
Q 023308 239 GLWIYIVAPPLGATAGAWVYNMVRYTDK 266 (284)
Q Consensus 239 ~~wvy~v~p~~Ga~la~~l~~~~~~~~~ 266 (284)
+.|.|++.+.+|.+++.++.-+...+++
T Consensus 187 Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 187 WRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred eEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 7899999999999999999888776654
No 46
>PRK14195 camphor resistance protein CrcB; Provisional
Probab=25.07 E-value=3.2e+02 Score=21.49 Aligned_cols=107 Identities=12% Similarity=0.027 Sum_probs=53.7
Q ss_pred hhHHHHHHHHHHHHhhcccccccccCCCCcchhhHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHhcC
Q 023308 137 VLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGP 216 (284)
Q Consensus 137 ~lGa~~g~~~~~~~~~~~~~~~~~~~p~~s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~~~~~~~l~ig~~v~~~~~~~~~ 216 (284)
.+|+.+|+.+=|.+. ...... .+..-++..++.-.+++|++-++.-... ++... ...+...+.+ -.+|.
T Consensus 8 ~~Gg~~Ga~~Ry~l~-~~~~~~---~~~~fP~gTl~vNi~GsfllG~~~~~~~-~~~~~--~~~~~~~l~t----Gf~Gg 76 (125)
T PRK14195 8 AAGGALGSVARYLVG-VGALRL---MGPAFPWGTLAVNVTGSFLIGVLAGLLA-HRWNA--SQEWRLFLIV----GVLGG 76 (125)
T ss_pred HHHHHHHHHHHHHHH-HHHHhc---cCCCCchHHHHHHHHHHHHHHHHHHHHH-hccCC--CHHHHHHHHh----HhccC
Confidence 478888887444332 111111 1112234578899999999876643321 11111 1112222222 22344
Q ss_pred CccCccchhhhHHHHHhh----hCCCceeeeeecchHHHHHHHHHHH
Q 023308 217 ITGASMNPARSLGPAIVS----SQYKGLWIYIVAPPLGATAGAWVYN 259 (284)
Q Consensus 217 ~tG~~lNPAr~lg~~l~~----~~~~~~wvy~v~p~~Ga~la~~l~~ 259 (284)
+|-. -++...... ++|.....|++..++++++++.+=.
T Consensus 77 fTTF-----STf~~e~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~ 118 (125)
T PRK14195 77 FTTF-----SAFSLDAALLIERGAYGAAAAYIAASVVLSVAALFAGL 118 (125)
T ss_pred cccH-----HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4411 122222222 3565667899999999998887644
No 47
>PRK14225 camphor resistance protein CrcB; Provisional
Probab=23.31 E-value=3.8e+02 Score=21.54 Aligned_cols=111 Identities=13% Similarity=-0.014 Sum_probs=55.0
Q ss_pred hhhHHHHHHHHHHHHhhcccccccccCCCCcchhhHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHhc
Q 023308 136 QVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAG 215 (284)
Q Consensus 136 Q~lGa~~g~~~~~~~~~~~~~~~~~~~p~~s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~~~~~~~l~ig~~v~~~~~~~~ 215 (284)
=.+|+.+|+.+=|. .........+ ...++..++.-.+++|++-+..-.....++. .....+...+.++ ..|
T Consensus 16 V~lGG~~Ga~~Ry~-l~~~~~~~~~---~~fP~gTl~VNi~GsfllG~l~~~~~~~~~~-~~~~~~~~~l~tG----flG 86 (137)
T PRK14225 16 VGCGAAIGALLRFL-SGWVIVAILG---ANPLWGTSFVNIVGSFIIMFFATLTGPEGRW-LVSPAWRQFVMGG----LCG 86 (137)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHhcC---CCCcHHHHHHHHHHHHHHHHHHHHHHhcccc-cCCHHHHHHHHHH----Hhc
Confidence 34788888874443 3211111111 1233567889999999987654322111111 0111122222222 223
Q ss_pred CCccCccchhhhHHHHHh----hhCCCceeeeeecchHHHHHHHHHHHH
Q 023308 216 PITGASMNPARSLGPAIV----SSQYKGLWIYIVAPPLGATAGAWVYNM 260 (284)
Q Consensus 216 ~~tG~~lNPAr~lg~~l~----~~~~~~~wvy~v~p~~Ga~la~~l~~~ 260 (284)
.+|-. -+++.... .++|.....|++..++++++++.+=..
T Consensus 87 gfTTF-----STfs~E~~~L~~~~~~~~a~~y~~~s~~~gl~a~~lG~~ 130 (137)
T PRK14225 87 GLTTF-----SSMSLDTFLLVLHGNAAFALAYLCGLVFLSLSAAMLGLI 130 (137)
T ss_pred hhccH-----HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33310 12222222 245666778999999999998876543
No 48
>COG3448 CBS-domain-containing membrane protein [Signal transduction mechanisms]
Probab=22.84 E-value=3.7e+02 Score=25.05 Aligned_cols=64 Identities=9% Similarity=0.019 Sum_probs=35.2
Q ss_pred CCCcccchhhhhhhHHHHHHHHHHHHhhcccccc-----cc----------cCCCCcchhhHHHHHHHHHHHHHHHhhh
Q 023308 125 PWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQF-----AG----------TLPAGSNIQAFVMEFIITFYLMFVISGV 188 (284)
Q Consensus 125 ~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~-----~~----------~~p~~s~~~~~~~E~~~Tf~l~~~i~~~ 188 (284)
.|++.+.-.+.-++|.++...+..+.+..+...- .| .+|-...|..+....+..++=+.+.+.+
T Consensus 24 ~~rerl~~~~gA~iGilltg~~c~~~~~~~~~lpllvAPmGASAVLLFavpaSPLAQPwsiiGGNlvaAlvgvtva~~v 102 (382)
T COG3448 24 RLRERLRAAIGALIGILLTGLACGYVLGVDPNLPLLVAPMGASAVLLFAVPASPLAQPWSIIGGNLVAALVGVTVAYFV 102 (382)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcchhccccCcceEEEEeccCCccccchhhhcchHHHHHHhhhhhhhh
Confidence 4455555566666777776666666555332211 11 2233355666666777766666655554
No 49
>KOG4647 consensus Uncharacterized membrane protein [Function unknown]
Probab=20.70 E-value=1.7e+02 Score=25.87 Aligned_cols=34 Identities=21% Similarity=0.489 Sum_probs=23.3
Q ss_pred CCCCCCCCCCCCcccchHHHHHHHHHHHHHHHHHHH
Q 023308 32 PPPPPSCGTKDSVYFSVPFMQKLMAEILGTYFMIFA 67 (284)
Q Consensus 32 ~~~~p~~~~~~~~~~~~~~~~~~~~EfigT~~lv~~ 67 (284)
+|..|..+-.|... .++||++++|.+--|++.++
T Consensus 78 ~~~~~R~~g~eyv~--~sf~~R~~AE~IDffilf~~ 111 (263)
T KOG4647|consen 78 QPAQPRVDGVEYVA--ASFLRRLLAELIDFFILFSF 111 (263)
T ss_pred CccccccCceeeeh--hHHHHHHHHHHHHHHHHHHH
Confidence 34445555444333 57999999999998887764
No 50
>PRK14217 camphor resistance protein CrcB; Provisional
Probab=20.12 E-value=4.2e+02 Score=21.20 Aligned_cols=108 Identities=13% Similarity=0.109 Sum_probs=54.4
Q ss_pred hHHHHHHHHHHHHhhcccccccccCCCCcchhhHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHhcCC
Q 023308 138 LGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPI 217 (284)
Q Consensus 138 lGa~~g~~~~~~~~~~~~~~~~~~~p~~s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~~~~~~~l~ig~~v~~~~~~~~~~ 217 (284)
+|+.+|+.+=| ......+... +..-++..++.-.+++|++-+..-... .+.... ..+...+..+ ..|.+
T Consensus 11 iGG~lGa~~Ry-~l~~~~~~~~---~~~fP~gTl~VNi~GsfllG~~~~~~~-~~~~~~--~~~~~~l~tG----flGgf 79 (134)
T PRK14217 11 IGGSLGAMSRY-LVTIMAQNAW---GIKFPYGTLLVNTLGSFLAGFFLIVLV-GRFSAE--ESFRLFLFTG----FLGAF 79 (134)
T ss_pred HHHHHHHHHHH-HHHHHHHhhc---CCCCcHHHHHHHHHHHHHHHHHHHHHH-hccCCC--HHHHHHHHHH----Hhchh
Confidence 78888887433 3322111111 112335678899999999876653321 111111 1122222222 22333
Q ss_pred ccCccchhhhHHHHHh----hhCCCceeeeeecchHHHHHHHHHHHHH
Q 023308 218 TGASMNPARSLGPAIV----SSQYKGLWIYIVAPPLGATAGAWVYNMV 261 (284)
Q Consensus 218 tG~~lNPAr~lg~~l~----~~~~~~~wvy~v~p~~Ga~la~~l~~~~ 261 (284)
|-. -+++.... .++|.....|++..++++++++++=..+
T Consensus 80 TTF-----STf~~E~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 122 (134)
T PRK14217 80 TTF-----SSFAAESLFMFEQGYWFKLITNILVNNVGSLSMVFIGTLV 122 (134)
T ss_pred ccH-----HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 310 12222222 2356566789999999999888765444
No 51
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=20.08 E-value=1.3e+02 Score=18.30 Aligned_cols=20 Identities=15% Similarity=0.313 Sum_probs=16.4
Q ss_pred eeecchHHHHHHHHHHHHHh
Q 023308 243 YIVAPPLGATAGAWVYNMVR 262 (284)
Q Consensus 243 y~v~p~~Ga~la~~l~~~~~ 262 (284)
=+.+|++.+++++++...+.
T Consensus 13 DLAAP~iagIi~s~iv~w~~ 32 (35)
T PF13940_consen 13 DLAAPIIAGIIASLIVGWLR 32 (35)
T ss_pred HhHhHHHHHHHHHHHHHHHH
Confidence 35789999999999888765
Done!