BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023309
(284 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SLK2|ALIS3_ARATH ALA-interacting subunit 3 OS=Arabidopsis thaliana GN=ALIS3 PE=1
SV=1
Length = 349
Score = 434 bits (1116), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/276 (73%), Positives = 229/276 (82%), Gaps = 1/276 (0%)
Query: 9 VVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNH 68
VVEIVDRY+T+CIP RT+KVA+IQ + K C R + VTK MK+P+YVYYQL+NFYQNH
Sbjct: 75 VVEIVDRYDTECIPAPARTNKVAYIQGDGDKVCNRDLKVTKRMKQPIYVYYQLENFYQNH 134
Query: 69 RRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQL 128
RRYVKSR+D QL+ ++ S C+PED G+PIVPCGLIAWSLFNDTY SRN L
Sbjct: 135 RRYVKSRSDSQLRSTKYENQISACKPEDDV-GGQPIVPCGLIAWSLFNDTYALSRNNVSL 193
Query: 129 TVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPT 188
VNK GIAWKSD++HKFG +VFP NFQ G + GGA L+ IPLS+QEDLIVWMRTAALPT
Sbjct: 194 AVNKKGIAWKSDKEHKFGNKVFPKNFQKGNITGGATLDPRIPLSEQEDLIVWMRTAALPT 253
Query: 189 FRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVG 248
FRKLYGKIE DLE D I V L NNYNTYSF+GKKKLVLSTTSWLGGKNDFLGIAYLTVG
Sbjct: 254 FRKLYGKIESDLEMGDTIHVKLNNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVG 313
Query: 249 GLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGGH 284
G+CF LAL+FTI+YLVKPRRLGDPSYLSWNRNPGG
Sbjct: 314 GICFILALAFTIMYLVKPRRLGDPSYLSWNRNPGGR 349
>sp|Q9LTW0|ALIS1_ARATH ALA-interacting subunit 1 OS=Arabidopsis thaliana GN=ALIS1 PE=1
SV=1
Length = 350
Score = 428 bits (1100), Expect = e-119, Method: Compositional matrix adjust.
Identities = 200/276 (72%), Positives = 232/276 (84%), Gaps = 1/276 (0%)
Query: 9 VVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNH 68
VVEIVDRY++ CIP+++R +KVA+IQ +K+CTR + V K MK+P+YVYYQL+NFYQNH
Sbjct: 76 VVEIVDRYDSACIPLSDRANKVAYIQGTGNKSCTRTLIVPKRMKQPIYVYYQLENFYQNH 135
Query: 69 RRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQL 128
RRYVKSR+D QL+ ++ C+PED G+PIVPCGLIAWSLFNDTY SRN + L
Sbjct: 136 RRYVKSRSDSQLRSVKDENQIDACKPEDDF-GGQPIVPCGLIAWSLFNDTYVLSRNNQGL 194
Query: 129 TVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPT 188
TVNK GIAWKSD++HKFGK VFP NFQ G L GGA L+ + PLS QEDLIVWMRTAALPT
Sbjct: 195 TVNKKGIAWKSDKEHKFGKNVFPKNFQKGNLTGGASLDPNKPLSDQEDLIVWMRTAALPT 254
Query: 189 FRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVG 248
FRKLYGKIE DLE+ + I V L+NNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVG
Sbjct: 255 FRKLYGKIESDLEKGENIQVTLQNNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVG 314
Query: 249 GLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGGH 284
G+CF LAL+FT++YLVKPRRLGDP+YLSWNR PGG
Sbjct: 315 GICFVLALAFTVMYLVKPRRLGDPTYLSWNRIPGGR 350
>sp|Q8L8W0|ALIS5_ARATH ALA-interacting subunit 5 OS=Arabidopsis thaliana GN=ALIS5 PE=1
SV=1
Length = 350
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 227/275 (82%), Gaps = 1/275 (0%)
Query: 9 VVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNH 68
VVEIVDRY+TDCIP ++R + VA+IQ K C R ITVTK MK PVYVYYQL+NFYQNH
Sbjct: 75 VVEIVDRYDTDCIPTSSRNNMVAYIQGEGDKICKRTITVTKAMKHPVYVYYQLENFYQNH 134
Query: 69 RRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQL 128
RRYVKSRND QL+ + + C PED G+PIVPCGL+AWSLFNDTY+FSRN +QL
Sbjct: 135 RRYVKSRNDAQLRSPKEEHDVKTCAPEDNV-GGEPIVPCGLVAWSLFNDTYSFSRNSQQL 193
Query: 129 TVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPT 188
VNK GI+WKSDR++KFGK VFP NFQ G IGG LN S PLS+QEDLIVWMRTAALPT
Sbjct: 194 LVNKKGISWKSDRENKFGKNVFPKNFQKGAPIGGGTLNISKPLSEQEDLIVWMRTAALPT 253
Query: 189 FRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVG 248
FRKLYGKIE DL D I V+L+NNYNTYSF+G+KKLVLSTTSWLGG+NDFLGIAYLTVG
Sbjct: 254 FRKLYGKIETDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTTSWLGGRNDFLGIAYLTVG 313
Query: 249 GLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGG 283
+C FLA++F ++YLVKPR+LGDPSYLSWNR+ GG
Sbjct: 314 SICLFLAVTFAVLYLVKPRQLGDPSYLSWNRSAGG 348
>sp|Q9SA35|ALIS4_ARATH Putative ALA-interacting subunit 4 OS=Arabidopsis thaliana GN=ALIS4
PE=2 SV=2
Length = 336
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 195/275 (70%), Positives = 229/275 (83%), Gaps = 1/275 (0%)
Query: 9 VVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNH 68
V+EIVDRY+TDCIP+++R +KV +IQ K C R ITVTK MK PVYVYYQL+N+YQNH
Sbjct: 61 VIEIVDRYDTDCIPLSSRDNKVRYIQGLEDKRCNRTITVTKTMKNPVYVYYQLENYYQNH 120
Query: 69 RRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQL 128
RRYVKSR D QL+ ET C PEDT G+PIVPCGL+AWSLFNDTY F+RN ++L
Sbjct: 121 RRYVKSRQDGQLRSPKDEHETKSCAPEDTL-GGQPIVPCGLVAWSLFNDTYDFTRNNQKL 179
Query: 129 TVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPT 188
VNK I+WKSDR+ KFGK VFP NFQ G+LIGG L++ IPLS+QEDLIVWMRTAALPT
Sbjct: 180 PVNKKDISWKSDRESKFGKNVFPKNFQKGSLIGGKSLDQDIPLSEQEDLIVWMRTAALPT 239
Query: 189 FRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVG 248
FRKLYGKI+ DL+ D I V+L+NNYNTYSF+GKKKLVLSTTSWLGG+NDFLGIAYLTVG
Sbjct: 240 FRKLYGKIDTDLQAGDTIKVLLQNNYNTYSFNGKKKLVLSTTSWLGGRNDFLGIAYLTVG 299
Query: 249 GLCFFLALSFTIVYLVKPRRLGDPSYLSWNRNPGG 283
+C FLA+SF+++YL KPR+LGDPSYLSWNR+ GG
Sbjct: 300 SICLFLAVSFSVLYLAKPRQLGDPSYLSWNRSAGG 334
>sp|Q67YS6|ALIS2_ARATH Putative ALA-interacting subunit 2 OS=Arabidopsis thaliana GN=ALIS2
PE=2 SV=1
Length = 343
Score = 343 bits (881), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 165/272 (60%), Positives = 212/272 (77%), Gaps = 5/272 (1%)
Query: 9 VVEIVDRYETDCIPVANRTDKVAFI-QSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQN 67
+EI+DRY+ +CIP RT+K+ +I S+ K CTR + V K+MK P+++YYQLDN+YQN
Sbjct: 71 AIEIIDRYDVECIPEEYRTNKLLYITDSSIPKNCTRYLKVQKYMKAPIFIYYQLDNYYQN 130
Query: 68 HRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQ 127
HRRYVKSR+D+QL + S TS CEPE+++ +G PIVPCGLIAWS+FNDT+TFSR + +
Sbjct: 131 HRRYVKSRSDQQLLHGLEYSHTSSCEPEESS-NGLPIVPCGLIAWSMFNDTFTFSRERTK 189
Query: 128 LTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALP 187
L V++N IAWKSDR+HKFGK V+P NFQNGTLIGGA L+ IPLS QED IVWMR AAL
Sbjct: 190 LNVSRNNIAWKSDREHKFGKNVYPINFQNGTLIGGAKLDPKIPLSDQEDFIVWMRAAALL 249
Query: 188 TFRKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTV 247
+FRKLYG+IE DLE +++V L NNYNTYSFSG+KKL+LST++WLGG+NDFLGI YL V
Sbjct: 250 SFRKLYGRIEEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGRNDFLGITYLVV 309
Query: 248 GGLCFFLALSFTIVYLVKPRRLGDPSYLSWNR 279
G +++ F +++L PR GD SWN+
Sbjct: 310 GSSSIVISIIFMLLHLKNPRPYGDN---SWNK 338
>sp|Q5F362|CC50A_CHICK Cell cycle control protein 50A OS=Gallus gallus GN=TMEM30A PE=2
SV=1
Length = 372
Score = 179 bits (454), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/245 (44%), Positives = 143/245 (58%), Gaps = 23/245 (9%)
Query: 40 TCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLK--KRSKTSETSQCEPEDT 97
TCT T+ + V++YY L NFYQNHRRYVKSR+D QL S + + +CEP T
Sbjct: 115 TCTINFTLEHSFESNVFMYYGLSNFYQNHRRYVKSRDDSQLNGDNSSLLNPSKECEPYRT 174
Query: 98 TPDGKPIVPCGLIAWSLFNDT---YTFSRNKR-QLTVNKNGIAWKSDRDHKF----GKEV 149
D KPI PCG IA S+FNDT Y + R +T+ K GIAW +D++ KF G
Sbjct: 175 NED-KPIAPCGAIANSMFNDTLELYHIENDTRTAITLIKKGIAWWTDKNVKFRNPKGDGN 233
Query: 150 FPSNFQNGT----LIGGAHLNESIPLSK---QEDLIVWMRTAALPTFRKLYGKIEVDLEE 202
+ FQ T ++ +S P + ED IVWMRTAALPTFRKLY IE
Sbjct: 234 LTALFQGTTKPVNWPKPVYMLDSEPDNNGFINEDFIVWMRTAALPTFRKLYRLIERKSNL 293
Query: 203 NDII-----DVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALS 257
+ + + NY +SF G+K+++LST SW+GGKN FLGIAY+TVG +CFFL +
Sbjct: 294 QPTLQAGKYSLNITYNYPVHSFDGRKRMILSTISWMGGKNPFLGIAYITVGSICFFLGVV 353
Query: 258 FTIVY 262
I++
Sbjct: 354 LLIIH 358
>sp|Q96WW4|IVN1_SCHPO Invasion protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=ivn1 PE=3 SV=1
Length = 371
Score = 171 bits (434), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 146/270 (54%), Gaps = 22/270 (8%)
Query: 30 VAFIQSNASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSET 89
V + ++ CT + + + M PV+ +Y+L NFYQNHRRY S + QL ++T
Sbjct: 100 VTAMWKSSGDVCTLRFQIPEEMTSPVFAFYRLKNFYQNHRRYTVSADMFQLLGEARTVAQ 159
Query: 90 SQ----CEPEDTTPDGKPIVPCGLIAWSLFNDTYTF--------SRNKRQL-TVNKNGIA 136
+ C+P + +GKP PCG+IA SLFND+Y+ S N L + NG A
Sbjct: 160 LKSYGFCKPLEANEEGKPYYPCGIIANSLFNDSYSSLLRYESFDSSNSLGLYNMTTNGTA 219
Query: 137 WKSDRD------HKFGKEVFPSNFQNGTLIGGAHLNESIP-LSKQEDLIVWMRTAALPTF 189
W DR+ + + V P N+ + + +++IP +S + +WMR AALPTF
Sbjct: 220 WPEDRERYKKTKYNASQIVPPPNW--AKMFPNGYTDDNIPDVSTWDAFQIWMRAAALPTF 277
Query: 190 RKLYGKIEVDLEENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGG 249
KL + + I ++ + N+ + G K ++ STTS +GGKN FLGI Y +GG
Sbjct: 278 SKLALRNVTTALQPGIYEMNITYNFPVTEYKGTKTIMFSTTSVIGGKNYFLGILYFVIGG 337
Query: 250 LCFFLALSFTIVYLVKPRRLGDPSYLSWNR 279
LC + +I L+KPRR+GDP YLSWNR
Sbjct: 338 LCAASGVILSIACLIKPRRVGDPRYLSWNR 367
>sp|Q1MTQ5|MUG89_SCHPO Meiotically up-regulated gene 89 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug89 PE=1 SV=1
Length = 396
Score = 167 bits (423), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/249 (39%), Positives = 140/249 (56%), Gaps = 11/249 (4%)
Query: 41 CTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQ---CEPEDT 97
C + TV +K P+++YY+L NF+QNHRRY KS +++QL+ + T++ + C P +
Sbjct: 134 CIIRFTVPSVLKAPIFIYYRLTNFFQNHRRYAKSVDEKQLQGVALTADEVKGGNCFPLEV 193
Query: 98 TPDGKPIVPCGLIAWSLFNDTYTFSR---NKRQLTVNKNGIAWKSDRDHKFGKEVFPSNF 154
D KP PCGLIA SLFNDT++ R + T + IAW SD+ P +
Sbjct: 194 NEDDKPYYPCGLIANSLFNDTFSSLRLLDDNSVYTFSTKNIAWASDKRRFLKTNYSPDDV 253
Query: 155 Q---NGTL-IGGAHLNESIP-LSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVI 209
N L + ++P LS E+L VWMRTA LPTF KL + + D ++
Sbjct: 254 APPPNWVLRYPDGYTESNMPDLSTMENLQVWMRTAGLPTFSKLAMRNDNDDIFPGTYEIK 313
Query: 210 LENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYLVKPRRL 269
+ + SF G K LVL+T S LGGKN FLGIAY+ V +C L FT+ + ++PR+L
Sbjct: 314 IGLFFPVKSFDGTKSLVLTTRSVLGGKNPFLGIAYIVVSAVCVVLGTVFTLRHFIRPRKL 373
Query: 270 GDPSYLSWN 278
D YL+W+
Sbjct: 374 ADHRYLNWD 382
>sp|Q8VEK0|CC50A_MOUSE Cell cycle control protein 50A OS=Mus musculus GN=Tmem30a PE=1 SV=1
Length = 364
Score = 165 bits (418), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 136/250 (54%), Gaps = 27/250 (10%)
Query: 38 SKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLK--KRSKTSETSQCEPE 95
S CT T+ + + V++YY L NFYQNHRRYVKSR+D QL + + + +CEP
Sbjct: 101 SCACTINFTLKQSFEGNVFMYYGLSNFYQNHRRYVKSRDDSQLNGDPSALLNPSKECEPY 160
Query: 96 DTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQ-------LTVNKNGIAWKSDRDHKF--- 145
D +PI PCG IA S+FNDT + + + K GIAW +D++ KF
Sbjct: 161 RRNED-RPIAPCGAIANSMFNDTLELYLVANESDPKPIPIPLKKKGIAWWTDKNVKFRNP 219
Query: 146 -GKEVFPSNFQNGTLIGGAHL--------NESIPLSKQEDLIVWMRTAALPTFRKLYGKI 196
GKE F++ H +ES ED IVWMRTAALPTFRKLY I
Sbjct: 220 PGKESLEEKFKDTIKPVNWHKAVYELDPEDESNNGFINEDFIVWMRTAALPTFRKLYRLI 279
Query: 197 EV--DLEENDIIDVILEN---NYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLC 251
E DL N NY +SF G+K+++LST SW+GGKN FLGIAY+T+G +
Sbjct: 280 ERRDDLHPTLPAGQYFLNITYNYPVHSFDGRKRMILSTISWMGGKNPFLGIAYITIGSIS 339
Query: 252 FFLALSFTIV 261
F L + ++
Sbjct: 340 FLLGVVLLVI 349
>sp|Q5R6C0|CC50A_PONAB Cell cycle control protein 50A OS=Pongo abelii GN=TMEM30A PE=2 SV=1
Length = 361
Score = 165 bits (417), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 99/244 (40%), Positives = 135/244 (55%), Gaps = 24/244 (9%)
Query: 41 CTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKT--SETSQCEPEDTT 98
CT T+ K + V++YY L NFYQNHRRYVKSR+D QL S + + +CEP
Sbjct: 104 CTINFTLEKSFEGNVFMYYGLSNFYQNHRRYVKSRDDSQLNGDSSALLNPSKECEPYRRN 163
Query: 99 PDGKPIVPCGLIAWSLFNDTYTF-----SRNKRQLTVNKNGIAWKSDRDHKFG------- 146
D KPI PCG IA S+FNDT + + K GIAW +D++ KF
Sbjct: 164 ED-KPIAPCGAIANSMFNDTLELFLIGNDSYPIPIALKKKGIAWWTDKNVKFRNPPGGDN 222
Query: 147 -KEVFPSNFQNGTLIGGAHLNESIPLSK---QEDLIVWMRTAALPTFRKLYGKIEVDLEE 202
KE F + + ++ +S P + ED IVWMRTAALPTFRKLY IE +
Sbjct: 223 LKERFKGTTKPVNWLKPVYMLDSDPDNNGFINEDFIVWMRTAALPTFRKLYRLIERKSDL 282
Query: 203 NDII-----DVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALS 257
+ + + + NY + F G+K+++LST SW+GGKN FLGIAY+ VG + F L +
Sbjct: 283 HPTLPAGRYSLNVTYNYPVHYFDGRKRMILSTISWMGGKNPFLGIAYIAVGSISFLLGVV 342
Query: 258 FTIV 261
++
Sbjct: 343 LLVI 346
>sp|Q9NV96|CC50A_HUMAN Cell cycle control protein 50A OS=Homo sapiens GN=TMEM30A PE=1 SV=1
Length = 361
Score = 164 bits (415), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 99/244 (40%), Positives = 136/244 (55%), Gaps = 24/244 (9%)
Query: 41 CTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKT--SETSQCEPEDTT 98
CT T+ K + V++YY L NFYQNHRRYVKSR+D QL S + + +CEP
Sbjct: 104 CTINFTLEKSFEGNVFMYYGLSNFYQNHRRYVKSRDDSQLNGDSSALLNPSKECEPYRRN 163
Query: 99 PDGKPIVPCGLIAWSLFNDTYTF-----SRNKRQLTVNKNGIAWKSDRDHKF----GKEV 149
D KPI PCG IA S+FNDT + + K GIAW +D++ KF G +
Sbjct: 164 ED-KPIAPCGAIANSMFNDTLELFLIGNDSYPIPIALKKKGIAWWTDKNVKFRNPPGGDN 222
Query: 150 FPSNFQNGT----LIGGAHLNESIPLSK---QEDLIVWMRTAALPTFRKLYGKIEVDLEE 202
F+ T + ++ +S P + ED IVWMRTAALPTFRKLY IE +
Sbjct: 223 LEERFKGTTKPVNWLKPVYMLDSDPDNNGFINEDFIVWMRTAALPTFRKLYRLIERKSDL 282
Query: 203 NDII-----DVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALS 257
+ + + + NY + F G+K+++LST SW+GGKN FLGIAY+ VG + F L +
Sbjct: 283 HPTLPAGRYSLNVTYNYPVHYFDGRKRMILSTISWMGGKNPFLGIAYIAVGSISFLLGVV 342
Query: 258 FTIV 261
++
Sbjct: 343 LLVI 346
>sp|Q6AY41|CC50A_RAT Cell cycle control protein 50A OS=Rattus norvegicus GN=Tmem30a PE=2
SV=1
Length = 328
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 129/236 (54%), Gaps = 33/236 (13%)
Query: 55 VYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKT--SETSQCEPEDTTPDGKPIVPCGLIAW 112
V++YY L NFYQNHRRYVKSR+D QL + + +CEP D KPI PCG IA
Sbjct: 82 VFMYYGLSNFYQNHRRYVKSRDDSQLNGDPSALLNPSKECEPYRRNED-KPIAPCGAIAN 140
Query: 113 SLFNDTYTF-------SRNKRQLTVNKNGIAWKSDRDHKF----GKEVFPSNFQNGTLIG 161
S+FNDT + + K GIAW +D++ KF GK+ F++ T
Sbjct: 141 SMFNDTLELFLVANESDPKPVPILLKKKGIAWWTDKNVKFRNPPGKDSLQEKFKDTTKPV 200
Query: 162 GAHL--------NESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVI---- 209
H +ES ED IVWMRTAALPTFRKLY IE +D+ +
Sbjct: 201 NWHKPVYELDPDDESNNGFINEDFIVWMRTAALPTFRKLYRLIE---RTDDLHPTLPAGQ 257
Query: 210 ----LENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIV 261
+ NY + F G+K+++LST SW+GGKN FLGIAY+T+G + F L + ++
Sbjct: 258 YYLNITYNYPVHFFDGRKRMILSTISWMGGKNPFLGIAYITIGSISFLLGVVLLVI 313
>sp|Q8BHG3|CC50B_MOUSE Cell cycle control protein 50B OS=Mus musculus GN=Tmem30b PE=2 SV=1
Length = 353
Score = 158 bits (399), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 127/252 (50%), Gaps = 32/252 (12%)
Query: 40 TCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKT--SETSQCEPEDT 97
C+ T+ + PVY+YY+L NFYQN+RRY SR+D QL + ++C P
Sbjct: 93 ACSWSFTLPELFPGPVYLYYELSNFYQNNRRYGVSRDDAQLSGLASALRHPANECAPYQF 152
Query: 98 TPDGKPIVPCGLIAWSLFNDTYTFSRNKR------QLTVNKNGIAWKSDRDHKFGKEVFP 151
DG PI PCG IA SLFND+++ ++ ++ +++ IAW +D KF
Sbjct: 153 RSDGLPIAPCGAIANSLFNDSFSLWHQRQPSDPFVEVPLDRTAIAWWTDYHVKFRNP--- 209
Query: 152 SNFQNGTLIGGAHLNESIP--------LSK--------QEDLIVWMRTAALPTFRKLYGK 195
NG+L P LS +D +VWMRTAALPTFRKLY +
Sbjct: 210 -PLVNGSLALAFRGTAPPPNWHRPVYELSPDPNNTGFINQDFVVWMRTAALPTFRKLYAR 268
Query: 196 IEVDLEENDI----IDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLC 251
I + V + NY +F G K ++LS SW+GGKN FLGIAYL VG LC
Sbjct: 269 IRQGNYSAGLPRGTYRVNITYNYPVRAFGGHKLIILSNISWMGGKNPFLGIAYLVVGSLC 328
Query: 252 FFLALSFTIVYL 263
+ +VY+
Sbjct: 329 IVMGFVMLVVYI 340
>sp|Q3MIR4|CC50B_HUMAN Cell cycle control protein 50B OS=Homo sapiens GN=TMEM30B PE=2 SV=1
Length = 351
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 128/252 (50%), Gaps = 32/252 (12%)
Query: 40 TCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKT--SETSQCEPEDT 97
+C ++ + + PVY+YY+L NFYQN+RRY SR+D QL ++C P
Sbjct: 93 SCAWYFSLPELFQGPVYLYYELTNFYQNNRRYGVSRDDAQLSGLPSALRHPVNECAPYQR 152
Query: 98 TPDGKPIVPCGLIAWSLFNDTYTFSRNKR------QLTVNKNGIAWKSDRDHKFGKEVFP 151
+ G PI PCG IA SLFND+++ ++ ++ ++++GIAW +D KF
Sbjct: 153 SAAGLPIAPCGAIANSLFNDSFSLWHQRQPGGPYVEVPLDRSGIAWWTDYHVKFRNP--- 209
Query: 152 SNFQNGTLIGGAHLNESIP--------LSK--------QEDLIVWMRTAALPTFRKLYGK 195
NG+L P LS +D +VWMRTAALPTFRKLY +
Sbjct: 210 -PLVNGSLALAFQGTAPPPNWRRPVYELSPDPNNTGFINQDFVVWMRTAALPTFRKLYAR 268
Query: 196 IEVDLEENDI----IDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLC 251
I + V + NY +F G K L+ S+ SW+GGKN FLGIAYL VG LC
Sbjct: 269 IRQGNYSAGLPRGAYRVNITYNYPVRAFGGHKLLIFSSISWMGGKNPFLGIAYLVVGSLC 328
Query: 252 FFLALSFTIVYL 263
+VY+
Sbjct: 329 ILTGFVMLVVYI 340
>sp|P53740|YN8S_YEAST Uncharacterized protein YNR048W OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YNR048W PE=1 SV=1
Length = 393
Score = 154 bits (388), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 99/255 (38%), Positives = 136/255 (53%), Gaps = 18/255 (7%)
Query: 37 ASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSET--SQCEP 94
++TC Q V H+K+ YVYY+L NF QN+R YV+S + +QLK ++ C+P
Sbjct: 122 GNQTCRIQFEVPNHIKKSTYVYYRLTNFNQNYREYVQSLDLDQLKGKALIGNDLDPNCDP 181
Query: 95 EDTTPDGKPIVPCGLIAWSLFNDTY----TFSRNKRQLTVNKNGIAWKSDRDHKFGKE-- 148
T + K I PCGLIA S+FNDT+ T + + GIAW +D H++GK
Sbjct: 182 LRTV-ENKTIFPCGLIANSMFNDTFGTTLTGVNDTADYLLTTKGIAWDTD-SHRYGKTEY 239
Query: 149 -----VFPSNFQNGTLIGGAHLNESIP-LSKQEDLIVWMRTAALPTFRKLYGKIEVDLEE 202
V P N+ L + +++IP L E +WMRTAALP F KL K E +
Sbjct: 240 NASDIVPPPNW--AKLFPNGYTDDNIPDLQNWEQFKIWMRTAALPNFYKLAMKNETNGLG 297
Query: 203 NDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVY 262
I +E NY SF G K VL+T S +G N+ LGI YL V G+ A+ F I
Sbjct: 298 KGIYIADIELNYPVRSFYGTKSFVLTTNSIIGAGNEALGIVYLIVAGIATLFAILFLIKV 357
Query: 263 LVKPRRLGDPSYLSW 277
+ KPR + D SYL++
Sbjct: 358 IFKPRPMHDHSYLNF 372
>sp|P25656|CDC50_YEAST Cell division control protein 50 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC50 PE=1 SV=1
Length = 391
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 135/256 (52%), Gaps = 18/256 (7%)
Query: 36 NASKTCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQL--KKRSKTSETSQCE 93
N ++C Q + +K+ +++YY++ NFYQNHRRYV+S + +Q+ + K + C
Sbjct: 118 NGEQSCELQFEIPNDIKKSIFIYYKITNFYQNHRRYVQSFDTKQILGEPIKKDDLDTSCS 177
Query: 94 PEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKN----GIAWKSDRDHKFGKE- 148
P + D K I PCGLIA S+FNDT++ + T + N I+W DR H+F
Sbjct: 178 PIRSRED-KIIYPCGLIANSMFNDTFSQVLSGIDDTEDYNLTNKHISWSIDR-HRFKTTK 235
Query: 149 ------VFPSNFQNGTLIGGAHLNESIP-LSKQEDLIVWMRTAALPTFRKLYGKIEVDLE 201
V P N+ G + +E++P + E+ VWMRTAA P F KL K E
Sbjct: 236 YNASDIVPPPNWMKKYPDG--YTDENLPDIHTWEEFQVWMRTAAFPKFYKLTLKNESASL 293
Query: 202 ENDIIDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIV 261
+ +E NY F G K VL+T +GG+N LG+ YL V GLC + F +
Sbjct: 294 PKGKYQMNIELNYPISLFGGTKSFVLTTNGAIGGRNMSLGVLYLIVAGLCALFGIIFLVK 353
Query: 262 YLVKPRRLGDPSYLSW 277
+ +PR +GD +YL++
Sbjct: 354 LIFQPRAMGDHTYLNF 369
>sp|Q95JK4|CC50C_MACFA Cell cycle control protein 50C OS=Macaca fascicularis GN=TMEM30C
PE=2 SV=1
Length = 344
Score = 127 bits (319), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 139/289 (48%), Gaps = 40/289 (13%)
Query: 4 LSLYQVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQIT--VTKHMKRPVYVYYQL 61
LS EI Y C A + SN K CT I ++ M VY+YY+L
Sbjct: 55 LSARSTQEIEINYTRICANCAKLRENA----SNFDKECTCSIPFYLSGKMMGNVYMYYKL 110
Query: 62 DNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTF 121
FYQN RYV+SR++ QL + C P + + PIVPCG IA S+FNDT
Sbjct: 111 YGFYQNLYRYVRSRSNRQLVGKD-VKAVEDCAPFKMSDNKTPIVPCGAIANSMFNDTIIL 169
Query: 122 SRN-----KRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIP-----L 171
S N + ++ + K+G+ W +D+ KF PS+ G + P L
Sbjct: 170 SHNINSSVQIKVPMLKSGLTWWTDKYVKFQN---PSSKNLADEFRGTTKPPNWPKPIYDL 226
Query: 172 SKQE---------DLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYN---TYSF 219
K++ D IVWMR AA PTF+KLYG++ + I+ + NY+ TY+F
Sbjct: 227 DKKDPRNNGFLNDDFIVWMRAAAFPTFKKLYGRLN---RTHHFIEGLPAGNYSFNITYNF 283
Query: 220 -----SGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYL 263
G+K +VLST +W GG + FLG+AY G + + + + +++
Sbjct: 284 PVTRFQGEKSVVLSTLTWCGGNSLFLGLAYTVTGAITWLASFTMMAIHI 332
>sp|Q2T9P5|CC50C_BOVIN Cell cycle control protein 50C OS=Bos taurus GN=TMEM30C PE=2 SV=1
Length = 343
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 140/291 (48%), Gaps = 33/291 (11%)
Query: 4 LSLYQVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQIT--VTKHMKRPVYVYYQL 61
LS + E+ Y C A ++ +N K C I+ + + M+ VY+YY+L
Sbjct: 55 LSAKSIKEVEINYTEKCATCAKLREEA----TNFDKECNCSISFYLPQKMEGNVYLYYKL 110
Query: 62 DNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDT--- 118
FYQN RY+ SR++ QL + + C P T+ +G PI PCG IA S+FNDT
Sbjct: 111 YGFYQNLYRYILSRSNIQLVG-ADVKDVRNCAPFRTSDNGLPIAPCGAIANSMFNDTIVL 169
Query: 119 -YTF-SRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGA----------HLN 166
Y F S ++ + + AW +D+ KF F + + G A L+
Sbjct: 170 WYNFNSSTHIRVPMVRTETAWWTDKYVKFQNPAFQN--LSSAFAGTAKPPNWPKPVYELD 227
Query: 167 ESIPLSK---QEDLIVWMRTAALPTFRKLYGKIE-----VDLEENDIIDVILENNYNTYS 218
E+ P + +D IVWMRTAA P F+KLY ++ + I+ N+
Sbjct: 228 ENDPGNNGFINDDFIVWMRTAAFPNFKKLYRRLHRIGNFTEGLPAGSYSFIINYNFPVSR 287
Query: 219 FSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYL-VKPRR 268
F G+K +VLST +W GG + FL +AYL G + + S ++L +K R+
Sbjct: 288 FQGQKAVVLSTLTWSGGSSLFLALAYLVTGAVTLLASFSMMALHLKLKERK 338
>sp|P42838|LEM3_YEAST Alkylphosphocholine resistance protein LEM3 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=LEM3 PE=1
SV=1
Length = 414
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 123/263 (46%), Gaps = 32/263 (12%)
Query: 40 TCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQ------CE 93
TC + T MK VY+ Y L+ F NHRRYV S +++Q++ + ET C+
Sbjct: 158 TCQIRFTTPSDMKNNVYLNYVLEKFAANHRRYVLSFSEDQIRGEDASYETVHDATGINCK 217
Query: 94 PEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNK-----NGIAWKSDRDHKFGK- 147
P DGK PCGLIA S+FNDT+ T N GI W+SD+ ++ K
Sbjct: 218 PLSKNADGKIYYPCGLIANSMFNDTFPLQLTNVGDTSNNYSLTNKGINWESDK-KRYKKT 276
Query: 148 -----EVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEE 202
++ P + G + + E+ WMR A KL + + +
Sbjct: 277 KYNYTQIAPPPYWEKMYPDGYNETNIPDIQDWEEFQNWMRPGAFDKITKL-----IRINK 331
Query: 203 NDII-------DVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLA 255
ND + D+ L ++ F+GKK + L+ S LGG+N FLGI YL G +C +A
Sbjct: 332 NDTLPAGEYQLDIGL--HWPVLEFNGKKGIYLTHGSHLGGRNPFLGIVYLIGGCICAAMA 389
Query: 256 LSFTIVYLVKPRRLGDPSYLSWN 278
L +L R++ D S LSWN
Sbjct: 390 LILLTFWLFGGRKIADASSLSWN 412
>sp|Q9D4D7|CC50C_MOUSE Cell cycle control protein 50C OS=Mus musculus GN=Tmem30c PE=2 SV=2
Length = 342
Score = 115 bits (288), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 131/249 (52%), Gaps = 24/249 (9%)
Query: 41 CTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPD 100
C+ + + M+ VY+YY+L FYQN +Y+ SR++ QL + +T+ C+P + +
Sbjct: 90 CSLPFYLPEKMEGDVYMYYKLYGFYQNLYQYILSRSNSQLVGKD-IWDTTNCDPFQVSHN 148
Query: 101 GKPIVPCGLIAWSLFNDTYTFSRN-----KRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQ 155
PI+PCG IA S+FNDT T S N + ++ + K+G+ W +D+ KF + SNF
Sbjct: 149 DTPIIPCGAIANSIFNDTITLSYNLNSSTQIEVPMLKSGLTWWTDKYVKF-RNPRSSNFT 207
Query: 156 NGTLIGGAHLNESIPLSK------------QEDLIVWMRTAALPTFRKLYGKIE-VDLEE 202
+ L+ + P+ + ED IVWMRTAA PTF+KLY +++ V
Sbjct: 208 STFAGSSKPLHWAKPIYELDLDDPGNNGFLNEDFIVWMRTAAFPTFKKLYRRLKRVHAFA 267
Query: 203 NDI----IDVILENNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSF 258
+ + + N+ F G+K +VLST +W+GG FLG+ Y G L + +
Sbjct: 268 EGLPAGNYSLSISYNFPVTMFQGEKSIVLSTLTWIGGGGLFLGLTYTVTGALTLLASFAI 327
Query: 259 TIVYLVKPR 267
++L+ R
Sbjct: 328 LTIHLMLKR 336
>sp|A0ZT23|CC50C_PANTR Cell cycle control protein 50C OS=Pan troglodytes GN=TMEM30C PE=2
SV=2
Length = 157
Score = 38.9 bits (89), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 33 IQSNASK-----TCTRQITVTKHMKRPVYVYYQLDNFYQNHRRYVKSRNDEQL 80
+Q NAS TC+ ++ M VY+YY+L FYQN Y++SR++ QL
Sbjct: 77 LQENASNFDKECTCSIPFYLSGKMMGNVYMYYKLYGFYQNLYLYIRSRSNRQL 129
>sp|O77469|FBLN1_CAEEL Fibulin-1 OS=Caenorhabditis elegans GN=fbl-1 PE=1 SV=3
Length = 728
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 7 YQVVEIVDRYETDCIPVANRTDKVAFIQSNASKTCTRQITVTK---HMKRPVYVYYQLDN 63
Y +++ +T+C+ R F + KT I V++ HM P V Y LD
Sbjct: 608 YSCIKVCSTEDTECLGNHTREVLYQFRAVPSLKTIISPIEVSRIVTHMGVPFSVDYNLDY 667
Query: 64 FYQNHRRYVKSRN 76
Q H R V+ RN
Sbjct: 668 VGQRHFRIVQERN 680
>sp|Q26565|PPIA_SCHMA Peptidyl-prolyl cis-trans isomerase OS=Schistosoma mansoni PE=1
SV=1
Length = 161
Score = 31.6 bits (70), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 108 GLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKF--GKEVFPSNFQNGTLIGGAHL 165
G I + LFND +RN R+L +KN +K H+ G +F NG GG +
Sbjct: 17 GRIIFELFNDVPDTTRNFRELCTHKNNFGYKGSVFHRIIPGFMCQGGDFTNGDGTGGKSI 76
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114,960,127
Number of Sequences: 539616
Number of extensions: 4993315
Number of successful extensions: 10684
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 10608
Number of HSP's gapped (non-prelim): 29
length of query: 284
length of database: 191,569,459
effective HSP length: 116
effective length of query: 168
effective length of database: 128,974,003
effective search space: 21667632504
effective search space used: 21667632504
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)