Query 023311
Match_columns 284
No_of_seqs 202 out of 640
Neff 5.6
Searched_HMMs 46136
Date Fri Mar 29 03:04:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023311.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023311hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1507 Nucleosome assembly pr 100.0 2.9E-67 6.3E-72 491.8 11.8 207 1-211 114-343 (358)
2 PTZ00007 (NAP-L) nucleosome as 100.0 2.2E-62 4.7E-67 464.1 17.8 200 1-213 78-285 (337)
3 PF00956 NAP: Nucleosome assem 100.0 3.1E-53 6.7E-58 386.4 10.8 201 1-207 39-244 (244)
4 PTZ00008 (NAP-S) nucleosome as 100.0 8.7E-49 1.9E-53 345.0 10.7 153 28-211 29-184 (185)
5 KOG1508 DNA replication factor 99.9 2.9E-23 6.3E-28 191.7 3.8 155 26-210 71-226 (260)
6 PF04931 DNA_pol_phi: DNA poly 89.3 0.23 5E-06 52.8 2.4 12 191-202 608-619 (784)
7 PF03066 Nucleoplasmin: Nucleo 88.3 0.14 3.1E-06 44.0 0.0 23 81-103 17-41 (149)
8 PF03066 Nucleoplasmin: Nucleo 78.1 0.69 1.5E-05 39.8 0.0 6 98-103 17-22 (149)
9 PF04147 Nop14: Nop14-like fam 76.1 2.8 6E-05 45.3 3.9 12 35-46 89-100 (840)
10 KOG1189 Global transcriptional 75.8 4.1 8.8E-05 43.6 4.8 52 33-86 753-809 (960)
11 KOG1832 HIV-1 Vpr-binding prot 74.9 1.6 3.5E-05 47.4 1.7 9 60-68 1219-1227(1516)
12 PHA02608 67 prohead core prote 70.6 2.7 5.9E-05 32.5 1.6 6 186-191 38-43 (80)
13 KOG0943 Predicted ubiquitin-pr 54.8 9.5 0.00021 43.2 2.7 8 38-45 1481-1488(3015)
14 KOG1832 HIV-1 Vpr-binding prot 54.1 8.1 0.00017 42.4 2.0 7 90-96 1246-1252(1516)
15 PTZ00415 transmission-blocking 52.5 7.6 0.00017 45.1 1.6 8 122-129 84-91 (2849)
16 PTZ00415 transmission-blocking 52.4 8.7 0.00019 44.7 2.0 6 195-200 131-136 (2849)
17 PF04871 Uso1_p115_C: Uso1 / p 48.5 14 0.00031 31.2 2.3 7 204-210 110-116 (136)
18 KOG2076 RNA polymerase III tra 46.4 17 0.00037 39.4 3.0 11 260-270 121-131 (895)
19 KOG2038 CAATT-binding transcri 46.1 13 0.00028 40.0 2.1 10 84-93 692-701 (988)
20 PF05764 YL1: YL1 nuclear prot 37.0 31 0.00067 31.7 2.9 8 213-220 41-48 (240)
21 PF08770 SoxZ: Sulphur oxidati 36.6 8.4 0.00018 30.9 -0.8 50 41-91 18-71 (100)
22 PF10417 1-cysPrx_C: C-termina 35.5 9.7 0.00021 25.5 -0.5 15 112-126 9-23 (40)
23 PF03344 Daxx: Daxx Family; I 32.1 15 0.00033 39.2 0.0 10 77-86 263-272 (713)
24 PF06784 UPF0240: Uncharacteri 27.8 38 0.00082 30.0 1.8 33 40-72 41-73 (179)
25 PF03344 Daxx: Daxx Family; I 27.1 21 0.00045 38.2 0.0 9 151-159 346-354 (713)
26 KOG1991 Nuclear transport rece 25.5 31 0.00067 38.0 0.9 9 150-158 816-825 (1010)
27 KOG2038 CAATT-binding transcri 25.4 43 0.00093 36.3 1.9 7 152-158 804-811 (988)
28 KOG3540 Beta amyloid precursor 23.8 63 0.0014 33.2 2.7 13 194-206 172-184 (615)
No 1
>KOG1507 consensus Nucleosome assembly protein NAP-1 [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.9e-67 Score=491.76 Aligned_cols=207 Identities=57% Similarity=0.981 Sum_probs=181.7
Q ss_pred ChhhhhhhhcccccCCccccccchh------------hhhccccCCCCchHHHHHhcChhhhhhhchhhHHhhccccceE
Q 023311 1 MYTKRYEIVNGVVEGAPNEVAMDQE------------EDKATEEKGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDIK 68 (284)
Q Consensus 1 ly~kR~~Iv~G~~e~~~~e~~~~~~------------~~~~~~~k~IP~FWl~vl~Nh~~ls~~I~e~De~iLkyL~DI~ 68 (284)
||+||++||+|.++|++++.++.+. ....+.++|||+||||||+|+++|+.||+++|++||+||+||+
T Consensus 114 lfdkR~eIi~g~~EP~eee~e~~~~~~de~~~~e~~~~~~~~d~KGIP~FWLtvlkNvd~lse~I~~~DEpiLk~L~DI~ 193 (358)
T KOG1507|consen 114 LFDKRREIINGEVEPTEEEIEWPEEIEDEGNLAEDTEEAEKEDPKGIPDFWLTVLKNVDLLSEMITERDEPILKYLKDIR 193 (358)
T ss_pred HHHHHHHHHhCCccCcccccccccccccccccccchhhhccccccCCchHHHHHHhhhhhhhhhcccccHHHHHHHhhhh
Confidence 7999999999999998777654211 1222467999999999999999999999999999999999999
Q ss_pred EEEeCCC-CceEEEEEeCCCCCccCceEEEEEEec---CCCCc------ceecceeeeeeecCCCCcchhhhhccCC-CC
Q 023311 69 WFRIDDP-KGFKLEFYFDPNPYFKNSVLTKTYHMI---DEDEP------ILEKAIGTEIEWYPGKCLTQKLLKKKPK-KG 137 (284)
Q Consensus 69 ve~~ed~-~gfkL~F~F~~NpYF~N~vLtK~y~~~---~~~~p------~~~~~~gt~I~Wk~GknlT~k~~kKk~k-k~ 137 (284)
+.+..++ .||+|+|||.+||||+|+||||+|+|+ +..+| .+.+|+||.|+|++|||||+++++|||| |+
T Consensus 194 ~~~~~~~~~~fklEFhFd~N~YFtN~vLTKTY~l~~~~D~~~P~~~~G~~i~~~~Gc~IdW~~gknlT~kti~kKq~~k~ 273 (358)
T KOG1507|consen 194 LKYSEDGQVGFKLEFHFDPNPYFTNEVLTKTYFLKSEPDEDDPFAFDGPEIEKCEGCEIDWKPGKNLTVKTIKKKQRNKG 273 (358)
T ss_pred eeeccCCccceEEEEEcCCCccccccceeeeeeeeccCCCcCCcccCCceEEeeecCeeeccCCCccchhhhhhhccccC
Confidence 9999887 599999999999999999999999998 55555 6889999999999999999998888765 78
Q ss_pred CCCCcccccccccccccccccccCCCCCCCCCChhHHHHHHHhhhhcccchhhhccccccchhhhhcccccccc
Q 023311 138 SKNAKPITKTEECESFFNFFNPPQVPEDDEDIDEDTAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQEE 211 (284)
Q Consensus 138 ~k~~r~i~k~~~~~SFFnfF~~~~~p~~~~~~dee~~eel~~~l~~D~eIg~~I~d~IiP~Av~yftgea~~~d 211 (284)
++++|+|++++++.||||||+||.+| +.++.|++.+ +.+|+.||+||++||+.|||+||.||||+|++++
T Consensus 274 ~~~~r~vtk~vp~eSFFNFFsPP~ip-d~~d~Ded~~---~~~L~~DyeIG~~lr~~IIPrAV~~fTGea~e~~ 343 (358)
T KOG1507|consen 274 TGQVRTVTKTVPNESFFNFFSPPEIP-DEEDLDEDDL---EELLELDYEIGETLRDKIIPRAVLWFTGEALEDE 343 (358)
T ss_pred CCceeeeeecccchhhhhccCCCCCC-cccccCchHH---HHHHHhhHHHHHHHHhhhhhheeeeecccccccc
Confidence 88999999999999999999999999 4444444332 7899999999999999999999999999995553
No 2
>PTZ00007 (NAP-L) nucleosome assembly protein -L; Provisional
Probab=100.00 E-value=2.2e-62 Score=464.06 Aligned_cols=200 Identities=47% Similarity=0.796 Sum_probs=176.9
Q ss_pred ChhhhhhhhcccccCCccccccchhhhhccccCCCCchHHHHHhcChhhhhhhchhhHHhhccccceEEEEeCCC--Cce
Q 023311 1 MYTKRYEIVNGVVEGAPNEVAMDQEEDKATEEKGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRIDDP--KGF 78 (284)
Q Consensus 1 ly~kR~~Iv~G~~e~~~~e~~~~~~~~~~~~~k~IP~FWl~vl~Nh~~ls~~I~e~De~iLkyL~DI~ve~~ed~--~gf 78 (284)
||++|++||+|..+.. ...+|||+||++||+||+.|+.+|+++|++||+||+||+|+++... +||
T Consensus 78 ly~kR~eII~G~~~~e-------------~~~~gIP~FWl~vL~Nh~~ls~~I~e~De~iL~~L~dI~ve~~~~~~~~gf 144 (337)
T PTZ00007 78 IYDKRKEALVQNGGAE-------------IGTPGLPQFWLTAMKNNNTLGSAIEEHDEPILSYLSDISCEYTEPNKQEGF 144 (337)
T ss_pred HHHHHHHHHcCCcccc-------------cccCCcccHHHHHHHcCccHhhhCCHHHHHHHHhhCceEEEEccCCCCCce
Confidence 6999999999964321 2357999999999999999999999999999999999999987643 699
Q ss_pred EEEEEeCCCCCccCceEEEEEEecC---CCCcceecceeeeeeecCCCCcchhhhhccCC-CCCCCCccccccccccccc
Q 023311 79 KLEFYFDPNPYFKNSVLTKTYHMID---EDEPILEKAIGTEIEWYPGKCLTQKLLKKKPK-KGSKNAKPITKTEECESFF 154 (284)
Q Consensus 79 kL~F~F~~NpYF~N~vLtK~y~~~~---~~~p~~~~~~gt~I~Wk~GknlT~k~~kKk~k-k~~k~~r~i~k~~~~~SFF 154 (284)
+|+|+|.+||||+|++|||+|+|.. .+.|++..++||+|+||+|||||+++++|||| |+++.+|+|++++++.|||
T Consensus 145 ~I~F~F~~NpyF~N~vLtK~y~~~~~d~~~~p~~~~~~~t~I~WK~GkdlT~k~v~kKqr~K~~~~~r~v~~~~~~~SFF 224 (337)
T PTZ00007 145 ILVFTFAPNPFFSNTVLTKTYHMKVLDGDDEPLLSNTVATEIDWKQGKDVTKKVVTKKQRHKKTKETRTVTETVDRESFF 224 (337)
T ss_pred EEEEEeCCCCCCCCCeEEEEEEeecCCCCCCceeecceeeeceeeCCCCchhhhcccccccccCCCceeeccCCCCCChH
Confidence 9999999999999999999999964 23577788999999999999999999988877 5677889999999999999
Q ss_pred ccccccCCCCCCC--CCChhHHHHHHHhhhhcccchhhhccccccchhhhhcccccccccc
Q 023311 155 NFFNPPQVPEDDE--DIDEDTAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQEEEI 213 (284)
Q Consensus 155 nfF~~~~~p~~~~--~~dee~~eel~~~l~~D~eIg~~I~d~IiP~Av~yftgea~~~dd~ 213 (284)
|||+|+.+|..+. .+++++.++++++|+.||+||.+|+++|||+||.||||+|+++++.
T Consensus 225 nfF~p~~~p~~~~~e~~~e~~~ee~~~~l~~DyeiG~~ikd~IIP~AV~yftGea~d~~~~ 285 (337)
T PTZ00007 225 NFFTSHEVPSDEELEKMSKHEIAELEMIVETDYEIGITIRDKLIPYAVYWFLGEAIDEDSD 285 (337)
T ss_pred HhcCCCCCCcccccccccchhHHHHHHHHHHhHHHHHHHHHhcccccHHhhCCCccccccc
Confidence 9999999987553 3455667789999999999999999999999999999999987653
No 3
>PF00956 NAP: Nucleosome assembly protein (NAP); InterPro: IPR002164 It is thought that NAPs act as histone chaperones, shuttling both core and linker histones from their site of synthesis in the cytoplasm to the nucleus. The proteins may be involved in regulating gene expression and therefore cellular differentiation [, ]. The centrosomal protein c-Nap1, also known as Cep250, has been implicated in the cell-cycle-regulated cohesion of microtubule-organizing centres. This 281 kDa protein consists mainly of domains predicted to form coiled coil structures. The C-terminal region defines a novel histone-binding domain that is responsible for targeting CNAP1, and possibly condensin, to mitotic chromosomes []. During interphase, C-Nap1 localizes to the proximal ends of both parental centrioles, but it dissociates from these structures at the onset of mitosis. Re-association with centrioles then occurs in late telophase or at the very beginning of G1 phase, when daughter cells are still connected by post-mitotic bridges. Electron microscopic studies performed on isolated centrosomes suggest that a proteinaceous linker connects parental centrioles and C-Nap1 may be part of a linker structure that assures the cohesion of duplicated centrosomes during interphase, but that is dismantled upon centrosome separation at the onset of mitosis []. ; GO: 0006334 nucleosome assembly, 0005634 nucleus; PDB: 2E50_Q 2Z2R_A 2AYU_A 3Q66_A 3C9B_A 3Q68_B 3Q33_B 2ZD7_B 3DM7_A 3C9D_A ....
Probab=100.00 E-value=3.1e-53 Score=386.38 Aligned_cols=201 Identities=48% Similarity=0.873 Sum_probs=157.8
Q ss_pred ChhhhhhhhcccccCCccccccchhhhhccccCCCCchHHHHHhcChhhhhhhchhhHHhhccccceEEEEeCC-CCceE
Q 023311 1 MYTKRYEIVNGVVEGAPNEVAMDQEEDKATEEKGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRIDD-PKGFK 79 (284)
Q Consensus 1 ly~kR~~Iv~G~~e~~~~e~~~~~~~~~~~~~k~IP~FWl~vl~Nh~~ls~~I~e~De~iLkyL~DI~ve~~ed-~~gfk 79 (284)
||++|++||+|.++++. ........ . .++|||+||++||+||++|+.+|++.|.+||+||+||+|++... +.+|+
T Consensus 39 l~~kR~~ii~g~~~~~~--~~~~~~~~-~-~~~gIP~FW~~vl~n~~~~~~~i~~~D~~iL~~L~dI~v~~~~~~~~~f~ 114 (244)
T PF00956_consen 39 LYEKRREIINGKREPTE--IEWEERQE-E-KPKGIPGFWLTVLKNHPLLAELISEEDEEILSYLTDIRVEYFEDNPRGFK 114 (244)
T ss_dssp HHHHHHHHHTTSS---H--HHH------S-SSTTSTTHHHHHHHTSHHHHTTSSHHHHHHHTTEEEEEEEECCSSTTEEE
T ss_pred HHHHHHHHhcccccccc--ccccchhh-c-cccCCCCccccccccCchhhcccccccHHHHHhhhheEEEecccCCcceE
Confidence 69999999999998874 21111111 1 28899999999999999999999999999999999999999877 67999
Q ss_pred EEEEeCCCCCccCceEEEEEEecCCCC---cceecceeeeeeecCCCCcchhhhhccCC-CCCCCCcccccccccccccc
Q 023311 80 LEFYFDPNPYFKNSVLTKTYHMIDEDE---PILEKAIGTEIEWYPGKCLTQKLLKKKPK-KGSKNAKPITKTEECESFFN 155 (284)
Q Consensus 80 L~F~F~~NpYF~N~vLtK~y~~~~~~~---p~~~~~~gt~I~Wk~GknlT~k~~kKk~k-k~~k~~r~i~k~~~~~SFFn 155 (284)
|+|+|.+||||+|++|+|+|+|...+. |...++++|+|+||+||+||++++++|++ ++++.+|++++.+..+|||+
T Consensus 115 l~F~F~~NpyF~n~~L~K~~~~~~~~~~~~~~~~~~~~t~I~Wk~gkd~t~~~~~~k~~~k~~~~~~~~~~~~~~~SFF~ 194 (244)
T PF00956_consen 115 LTFHFKPNPYFSNTVLTKEYYLKKEGDEEDPDELKSESTPIDWKPGKDLTKKEVKKKQKNKGTKQVRTITKEVPTESFFN 194 (244)
T ss_dssp EEEEECSTSSBSESEEEEEEEEESSSSTTTT-EEEEEE---EBSTTTCTTCCCCECECCSCCCH-ECCCCCCCC--SGGG
T ss_pred EEEEECCCCcccCCEEEEEEEEeccCCCCCCCcceeeeecccccCCCCccchhhhhcccccccccccceeecccCcchhh
Confidence 999999999999999999999987654 21158999999999999999998887655 56667788889999999999
Q ss_pred cccccCCCCCCCCCChhHHHHHHHhhhhcccchhhhccccccchhhhhcccc
Q 023311 156 FFNPPQVPEDDEDIDEDTAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEA 207 (284)
Q Consensus 156 fF~~~~~p~~~~~~dee~~eel~~~l~~D~eIg~~I~d~IiP~Av~yftgea 207 (284)
||+++.+|+++++.++ .++.++.+..||+||.+|+++|||+||.||||+|
T Consensus 195 ~F~~~~~~~~~~~e~~--~~~~~~~~~~d~ei~~~i~d~i~P~av~yy~gea 244 (244)
T PF00956_consen 195 FFSPPKLPDEEDDEEE--DEDEEEEIEDDFEIGEIIKDDIIPNAVKYYTGEA 244 (244)
T ss_dssp GSS-B-S--TTTSSST--CHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHTCT
T ss_pred hcccCCCCcccccccc--hhhHHHHhhccHHHHHHHHhheechHHHHhCCCC
Confidence 9999988865443322 2445678999999999999999999999999987
No 4
>PTZ00008 (NAP-S) nucleosome assembly protein-S; Provisional
Probab=100.00 E-value=8.7e-49 Score=345.02 Aligned_cols=153 Identities=21% Similarity=0.372 Sum_probs=129.7
Q ss_pred hccccCCCCchHHHHHhcChhhhhhhchhhHHhhccccceEEEE-eCCCCceEEEEEeCC--CCCccCceEEEEEEecCC
Q 023311 28 KATEEKGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFR-IDDPKGFKLEFYFDP--NPYFKNSVLTKTYHMIDE 104 (284)
Q Consensus 28 ~~~~~k~IP~FWl~vl~Nh~~ls~~I~e~De~iLkyL~DI~ve~-~ed~~gfkL~F~F~~--NpYF~N~vLtK~y~~~~~ 104 (284)
|.+.++|||+||++||+||++|+ +|+++|++||+||+||+|+. ..++.||+|+|+|.+ ||||+|++|||+|++...
T Consensus 29 R~~II~gIP~FW~~vl~n~~~~~-~I~~~D~~~L~~L~dI~ve~~~~~~~~f~i~F~F~~~~N~yF~n~~LtK~y~~~~~ 107 (185)
T PTZ00008 29 RQEIIEKIPGFWADTLRRHPALS-YLVPEDIDILEHLKKIDLEDNLDNNGSYKITLIFDEKAKEFMEPLVLVKHVIFKNN 107 (185)
T ss_pred HHHHHhcCccHHHHHHHcCcccc-ccCHHHHHHHHHhCceEEEEeecCCCCEEEEEEECCCCCCCcCCCEEEEEEEEecC
Confidence 33444579999999999999999 99999999999999999997 456679999999965 899999999999999765
Q ss_pred CCcceecceeeeeeecCCCCcchhhhhccCCCCCCCCcccccccccccccccccccCCCCCCCCCChhHHHHHHHhhhhc
Q 023311 105 DEPILEKAIGTEIEWYPGKCLTQKLLKKKPKKGSKNAKPITKTEECESFFNFFNPPQVPEDDEDIDEDTAEELQNQMEQD 184 (284)
Q Consensus 105 ~~p~~~~~~gt~I~Wk~GknlT~k~~kKk~kk~~k~~r~i~k~~~~~SFFnfF~~~~~p~~~~~~dee~~eel~~~l~~D 184 (284)
++. .+++|+|+||+|+|||+++++|+ + +++++.++.||||||+++..+ .+
T Consensus 108 ~~~---~~~~t~I~Wk~gkn~t~~~~kk~---~-----~~~~~~~~~SFF~fF~~~~~~-------------------~~ 157 (185)
T PTZ00008 108 QEK---VVEVTKIKWKEGKSPIAAAEKAR---S-----DLDDECIVWSIFEWFTEEEWQ-------------------DR 157 (185)
T ss_pred CCc---eeeeeecccCCCCCcceeeeecc---C-----ccccCCCCCChhhcCCCCccc-------------------Cc
Confidence 543 46789999999999999876522 1 345677899999999986333 35
Q ss_pred ccchhhhccccccchhhhhcccccccc
Q 023311 185 YDIGSTIRDKIIPHAVSWFTGEAIQEE 211 (284)
Q Consensus 185 ~eIg~~I~d~IiP~Av~yftgea~~~d 211 (284)
|+||++|+++|||+||.||||+++.++
T Consensus 158 ~eIg~~i~e~i~P~av~yy~ge~~~~~ 184 (185)
T PTZ00008 158 PDVGEIIRREIWHAPLLYYLDTVSIDD 184 (185)
T ss_pred HHHHHHHHHhhccchHHhhCCcccccc
Confidence 789999999999999999999988764
No 5
>KOG1508 consensus DNA replication factor/protein phosphatase inhibitor SET/SPR-2 [Replication, recombination and repair]
Probab=99.87 E-value=2.9e-23 Score=191.72 Aligned_cols=155 Identities=32% Similarity=0.583 Sum_probs=128.9
Q ss_pred hhhccccCCCCchHHHHHhcChhhhhhhchhhHHhhccccceEEEEeCCCC-ceEEEEEeCCCCCccCceEEEEEEecCC
Q 023311 26 EDKATEEKGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRIDDPK-GFKLEFYFDPNPYFKNSVLTKTYHMIDE 104 (284)
Q Consensus 26 ~~~~~~~k~IP~FWl~vl~Nh~~ls~~I~e~De~iLkyL~DI~ve~~ed~~-gfkL~F~F~~NpYF~N~vLtK~y~~~~~ 104 (284)
..+..+++.||+||.+++.|||.++.+|...|..+|.||..+.|+.+.+.. ||++.|+|.+|+||+|.+|+|+|++...
T Consensus 71 ~~r~~ii~~i~~fw~~~~~~hp~~~~~i~~~~~e~~~~l~~~~v~e~~~~~sg~~~~~~f~~ney~~~~~~~ke~~~~~~ 150 (260)
T KOG1508|consen 71 EKRRELIKEIPNFWVTAFLNHPTLSEWIPEEDEEALHYLHNLEVEELGDIKSGYRIKFSFEINEYFTNDLLVKEFQYKES 150 (260)
T ss_pred hhhhHHHhhcccceeEEEecCCcHhhhhhhhhhhhhccchHHHHHHhccccccCeeeeeeccchhcccchhceeeeeecc
Confidence 456778899999999999999999999999999999999999999887765 9999999999999999999999999988
Q ss_pred CCcceecceeeeeeecCCCCcchhhhhccCCCCCCCCcccccccccccccccccccCCCCCCCCCChhHHHHHHHhhhhc
Q 023311 105 DEPILEKAIGTEIEWYPGKCLTQKLLKKKPKKGSKNAKPITKTEECESFFNFFNPPQVPEDDEDIDEDTAEELQNQMEQD 184 (284)
Q Consensus 105 ~~p~~~~~~gt~I~Wk~GknlT~k~~kKk~kk~~k~~r~i~k~~~~~SFFnfF~~~~~p~~~~~~dee~~eel~~~l~~D 184 (284)
+.+ .+.+|+|.|+.|+.+..... . . ..++. ....+.|||.||+.+..+..+
T Consensus 151 ~~~---~s~~t~i~w~~~~~~~~~~~--~-~-~~~~k----~~~~~~s~f~wf~~~~~~~~d------------------ 201 (260)
T KOG1508|consen 151 GKP---SSESTPISWKEGKPLPNPVK--R-G-ELKNK----NGDGPKSFFEWFSDTSLKEFD------------------ 201 (260)
T ss_pred cCc---ccccccccccCCCCCccccc--c-c-ccccc----cCcccccHHHHHHhccCCCcc------------------
Confidence 765 47899999999998875433 1 1 11111 123578999999998776521
Q ss_pred ccchhhhccccccchhhhhccccccc
Q 023311 185 YDIGSTIRDKIIPHAVSWFTGEAIQE 210 (284)
Q Consensus 185 ~eIg~~I~d~IiP~Av~yftgea~~~ 210 (284)
+|+.+|++.+||++++||+-.....
T Consensus 202 -~i~ei~~~~~~~~~~~~~~~~~~~~ 226 (260)
T KOG1508|consen 202 -EILEIIKDELWPNPLQYYLEPDGEE 226 (260)
T ss_pred -chhhhhhcccccchhhhhccccccc
Confidence 6899999999999999999654433
No 6
>PF04931 DNA_pol_phi: DNA polymerase phi; InterPro: IPR007015 Proteins of this family are predominantly nucleolar. The majority are described as transcription factor transactivators. The family also includes the fifth essential DNA polymerase (Pol5p) of Schizosaccharomyces pombe (Fission yeast) and Saccharomyces cerevisiae (Baker's yeast) (2.7.7.7 from EC). Pol5p is localized exclusively to the nucleolus and binds near or at the enhancer region of rRNA-encoding DNA repeating units.; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006351 transcription, DNA-dependent
Probab=89.27 E-value=0.23 Score=52.84 Aligned_cols=12 Identities=0% Similarity=0.202 Sum_probs=4.6
Q ss_pred hccccccchhhh
Q 023311 191 IRDKIIPHAVSW 202 (284)
Q Consensus 191 I~d~IiP~Av~y 202 (284)
+...||+.-..+
T Consensus 608 ~~~~vf~~~~~~ 619 (784)
T PF04931_consen 608 VSEQVFEAFCPH 619 (784)
T ss_pred HHHHHHHHHHhh
Confidence 333344333333
No 7
>PF03066 Nucleoplasmin: Nucleoplasmin; InterPro: IPR004301 The nucleophosmin/nucleoplasmin family of chaperones includes nucleophosmin, nucleoplasmin and nucleoplasmin-like proteins. They function as nuclear chaperones which are needed for the proper assembly of nucleosomes and the attainment of proper higher order chromatin structures [].; GO: 0003676 nucleic acid binding; PDB: 2P1B_E 1XB9_I 1XE0_C 1NLQ_A 2VTX_E 1K5J_D 1EJY_N 1EE5_B 3T30_J.
Probab=88.29 E-value=0.14 Score=43.98 Aligned_cols=23 Identities=9% Similarity=0.121 Sum_probs=11.5
Q ss_pred EEEeCC--CCCccCceEEEEEEecC
Q 023311 81 EFYFDP--NPYFKNSVLTKTYHMID 103 (284)
Q Consensus 81 ~F~F~~--NpYF~N~vLtK~y~~~~ 103 (284)
.++|.+ |.--.....-++..|..
T Consensus 17 ~~~f~~~~~d~~~h~L~L~~v~Lga 41 (149)
T PF03066_consen 17 DYTFKVDDNDENEHQLSLRQVCLGA 41 (149)
T ss_dssp EEEE-TTSSSSSCEEEEEEEEEE-T
T ss_pred eEEEeCCCCCCcccEEEEEEeecCC
Confidence 466766 44444444456666653
No 8
>PF03066 Nucleoplasmin: Nucleoplasmin; InterPro: IPR004301 The nucleophosmin/nucleoplasmin family of chaperones includes nucleophosmin, nucleoplasmin and nucleoplasmin-like proteins. They function as nuclear chaperones which are needed for the proper assembly of nucleosomes and the attainment of proper higher order chromatin structures [].; GO: 0003676 nucleic acid binding; PDB: 2P1B_E 1XB9_I 1XE0_C 1NLQ_A 2VTX_E 1K5J_D 1EJY_N 1EE5_B 3T30_J.
Probab=78.09 E-value=0.69 Score=39.77 Aligned_cols=6 Identities=17% Similarity=0.229 Sum_probs=2.4
Q ss_pred EEEecC
Q 023311 98 TYHMID 103 (284)
Q Consensus 98 ~y~~~~ 103 (284)
.|++..
T Consensus 17 ~~~f~~ 22 (149)
T PF03066_consen 17 DYTFKV 22 (149)
T ss_dssp EEEE-T
T ss_pred eEEEeC
Confidence 455543
No 9
>PF04147 Nop14: Nop14-like family ; InterPro: IPR007276 Emg1 and Nop14 are novel proteins whose interaction is required for the maturation of the 18S rRNA and for 40S ribosome production [].
Probab=76.15 E-value=2.8 Score=45.32 Aligned_cols=12 Identities=8% Similarity=0.147 Sum_probs=5.2
Q ss_pred CCchHHHHHhcC
Q 023311 35 VPDFWLTAMKNN 46 (284)
Q Consensus 35 IP~FWl~vl~Nh 46 (284)
+-.|=..-+++|
T Consensus 89 l~Rf~~Er~~~~ 100 (840)
T PF04147_consen 89 LERFTRERQRQH 100 (840)
T ss_pred HHHHHHHHHHHh
Confidence 444444444443
No 10
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=75.79 E-value=4.1 Score=43.56 Aligned_cols=52 Identities=17% Similarity=0.245 Sum_probs=32.6
Q ss_pred CCCCchHHHHHhcChhhhhhhchhhHHhh-ccccceEEEEeC----CCCceEEEEEeCC
Q 023311 33 KGVPDFWLTAMKNNDVLSEEITERDEGAL-KFLKDIKWFRID----DPKGFKLEFYFDP 86 (284)
Q Consensus 33 k~IP~FWl~vl~Nh~~ls~~I~e~De~iL-kyL~DI~ve~~e----d~~gfkL~F~F~~ 86 (284)
.|+|. -.+||. -|.-+++++-...+.| -.|.+|.+..++ ..+.|-+.|.|+.
T Consensus 753 ~GvP~-rssv~i-~pTs~cLV~LtE~P~~VvtL~eVEiv~~ERV~f~lKnfDmvfIfKd 809 (960)
T KOG1189|consen 753 NGVPF-RSSVFI-QPTSSCLVNLTEWPFFVVTLEEVEIVNLERVQFGLKNFDMVFIFKD 809 (960)
T ss_pred CCCCc-cceeee-ecchhhhhccccCCceEEeecceeeeeeeeeeeccccceEEEEecc
Confidence 45553 233333 2344666666666665 788888887765 3458889999953
No 11
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=74.86 E-value=1.6 Score=47.37 Aligned_cols=9 Identities=22% Similarity=0.331 Sum_probs=4.7
Q ss_pred hhccccceE
Q 023311 60 ALKFLKDIK 68 (284)
Q Consensus 60 iLkyL~DI~ 68 (284)
++.||+++-
T Consensus 1219 l~tylt~~~ 1227 (1516)
T KOG1832|consen 1219 LQTYLTDTV 1227 (1516)
T ss_pred HHHhcCcch
Confidence 345566553
No 12
>PHA02608 67 prohead core protein; Provisional
Probab=70.57 E-value=2.7 Score=32.50 Aligned_cols=6 Identities=17% Similarity=0.645 Sum_probs=2.8
Q ss_pred cchhhh
Q 023311 186 DIGSTI 191 (284)
Q Consensus 186 eIg~~I 191 (284)
+||..|
T Consensus 38 eIA~sv 43 (80)
T PHA02608 38 EIARSV 43 (80)
T ss_pred HHHHHH
Confidence 455443
No 13
>KOG0943 consensus Predicted ubiquitin-protein ligase/hyperplastic discs protein, HECT superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=54.75 E-value=9.5 Score=43.17 Aligned_cols=8 Identities=25% Similarity=0.966 Sum_probs=3.6
Q ss_pred hHHHHHhc
Q 023311 38 FWLTAMKN 45 (284)
Q Consensus 38 FWl~vl~N 45 (284)
.|+-+|.+
T Consensus 1481 mwl~~Ft~ 1488 (3015)
T KOG0943|consen 1481 MWLDCFTH 1488 (3015)
T ss_pred HHHHHHHH
Confidence 45544443
No 14
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=54.05 E-value=8.1 Score=42.35 Aligned_cols=7 Identities=29% Similarity=0.444 Sum_probs=3.5
Q ss_pred ccCceEE
Q 023311 90 FKNSVLT 96 (284)
Q Consensus 90 F~N~vLt 96 (284)
|.|-+||
T Consensus 1246 lndGvLW 1252 (1516)
T KOG1832|consen 1246 LNDGVLW 1252 (1516)
T ss_pred eeCceee
Confidence 4455554
No 15
>PTZ00415 transmission-blocking target antigen s230; Provisional
Probab=52.53 E-value=7.6 Score=45.11 Aligned_cols=8 Identities=38% Similarity=0.472 Sum_probs=4.0
Q ss_pred CCCcchhh
Q 023311 122 GKCLTQKL 129 (284)
Q Consensus 122 GknlT~k~ 129 (284)
|++-.+++
T Consensus 84 ~~~~~~~~ 91 (2849)
T PTZ00415 84 GKDTSVKI 91 (2849)
T ss_pred ccccccce
Confidence 55555443
No 16
>PTZ00415 transmission-blocking target antigen s230; Provisional
Probab=52.39 E-value=8.7 Score=44.67 Aligned_cols=6 Identities=33% Similarity=0.301 Sum_probs=2.4
Q ss_pred cccchh
Q 023311 195 IIPHAV 200 (284)
Q Consensus 195 IiP~Av 200 (284)
|||+.+
T Consensus 131 i~~~~~ 136 (2849)
T PTZ00415 131 IIKRRR 136 (2849)
T ss_pred EeehHH
Confidence 344333
No 17
>PF04871 Uso1_p115_C: Uso1 / p115 like vesicle tethering protein, C terminal region; InterPro: IPR006955 This domain identifies a group of proteins, which are described as: General vesicular transport factor, Transcytosis associate protein (TAP) and Vesicle docking protein. This myosin-shaped molecule consists of an N-terminal globular head region, a coiled-coil tail which mediates dimerisation, and a short C-terminal acidic region []. p115 tethers COP1 vesicles to the Golgi by binding the coiled coil proteins giantin (on the vesicles) and GM130 (on the Golgi), via its C-terminal acidic region. It is required for intercisternal transport in the Golgi stack. This domain is found in the acidic C-terminal region, which binds to the golgins giantin and GM130. p115 is thought to juxtapose two membranes by binding giantin with one acidic region, and GM130 with another [].; GO: 0008565 protein transporter activity, 0006886 intracellular protein transport, 0005737 cytoplasm, 0016020 membrane
Probab=48.46 E-value=14 Score=31.21 Aligned_cols=7 Identities=29% Similarity=0.710 Sum_probs=2.9
Q ss_pred ccccccc
Q 023311 204 TGEAIQE 210 (284)
Q Consensus 204 tgea~~~ 210 (284)
+|+.+.+
T Consensus 110 LG~eVSd 116 (136)
T PF04871_consen 110 LGEEVSD 116 (136)
T ss_pred cCCCccC
Confidence 3444433
No 18
>KOG2076 consensus RNA polymerase III transcription factor TFIIIC [Transcription]
Probab=46.39 E-value=17 Score=39.45 Aligned_cols=11 Identities=55% Similarity=1.008 Sum_probs=4.5
Q ss_pred CCccCCCCCCC
Q 023311 260 GSKKSGRQQAG 270 (284)
Q Consensus 260 ~~~~~~~~~~~ 270 (284)
+.||+|+.+.+
T Consensus 121 ~~~k~~~~~r~ 131 (895)
T KOG2076|consen 121 GTKKRGRRSRG 131 (895)
T ss_pred cCCccCCCCCc
Confidence 33444444433
No 19
>KOG2038 consensus CAATT-binding transcription factor/60S ribosomal subunit biogenesis protein [Translation, ribosomal structure and biogenesis; Transcription]
Probab=46.07 E-value=13 Score=40.04 Aligned_cols=10 Identities=40% Similarity=0.564 Sum_probs=7.0
Q ss_pred eCCCCCccCc
Q 023311 84 FDPNPYFKNS 93 (284)
Q Consensus 84 F~~NpYF~N~ 93 (284)
++.||-|.|.
T Consensus 692 r~R~P~f~nA 701 (988)
T KOG2038|consen 692 RKRNPLFCNA 701 (988)
T ss_pred ccCCccccCC
Confidence 3568888775
No 20
>PF05764 YL1: YL1 nuclear protein; InterPro: IPR008895 The proteins in this family are designated YL1 []. They have been shown to be DNA-binding and may be transcription factors [].; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=36.98 E-value=31 Score=31.74 Aligned_cols=8 Identities=25% Similarity=0.086 Sum_probs=3.4
Q ss_pred ccCCCCCC
Q 023311 213 IELDDDED 220 (284)
Q Consensus 213 ~~d~~~~~ 220 (284)
++++..++
T Consensus 41 D~ef~~~~ 48 (240)
T PF05764_consen 41 DEEFESEE 48 (240)
T ss_pred CccccCCC
Confidence 34444333
No 21
>PF08770 SoxZ: Sulphur oxidation protein SoxZ; InterPro: IPR014880 SoxZ forms an anti parallel beta structure and forms a complex with SoxY. Sulphur oxidation occurs at the thiol of a conserved cysteine residue of the SoxY subunit []. ; PDB: 1V8H_B 2OX5_E 2OXG_E 2OXH_C.
Probab=36.64 E-value=8.4 Score=30.87 Aligned_cols=50 Identities=12% Similarity=0.242 Sum_probs=23.4
Q ss_pred HHHhcChhhhhhhchhhHH--hhccccceEEEEeCCCCceEEEEEe--CCCCCcc
Q 023311 41 TAMKNNDVLSEEITERDEG--ALKFLKDIKWFRIDDPKGFKLEFYF--DPNPYFK 91 (284)
Q Consensus 41 ~vl~Nh~~ls~~I~e~De~--iLkyL~DI~ve~~ed~~gfkL~F~F--~~NpYF~ 91 (284)
++|..||+-+-+-....-. .-.|++.|.|.+- +..-|++.+.+ .+||||+
T Consensus 18 k~li~HPMetGl~~d~tg~~iPa~~I~~v~v~~n-g~~v~~~~~~~siS~NP~l~ 71 (100)
T PF08770_consen 18 KALISHPMETGLRKDQTGKYIPAHFIEEVEVTYN-GKPVFRADWGPSISENPYLR 71 (100)
T ss_dssp EEEE----B-S-BB-TTS-BB--B-EEEEEEEET-TEEEEEEEE-TTB-SS-EEE
T ss_pred EEEEECCCccccccCCCCCCCChHheEEEEEEEC-CEEEEEEEeCCcccCCCcEE
Confidence 3566788766554333222 2389999999863 33366666666 4899985
No 22
>PF10417 1-cysPrx_C: C-terminal domain of 1-Cys peroxiredoxin; InterPro: IPR019479 This entry represents the C-terminal domain of 1-Cys peroxiredoxin, a member of the peroxiredoxin superfamily which protect cells against membrane oxidation through glutathione (GSH)-dependent reduction of phospholipid hydroperoxides to corresponding alcohols []. The C-terminal domain is crucial for providing the extra cysteine necessary for dimerisation of the whole molecule. Loss of the enzyme's peroxidase activity is associated with oxidation of the catalytic cysteine found upstream of this domain. Glutathionylation, presumably through its disruption of protein structure, facilitates access for GSH, resulting in spontaneous reduction of the mixed disulphide to the sulphydryl and consequent activation of the enzyme []. The domain is associated with IPR000866 from INTERPRO, which carries the catalytic cysteine. ; GO: 0051920 peroxiredoxin activity, 0055114 oxidation-reduction process; PDB: 1ZOF_E 2H01_A 3EMP_D 1YF1_G 1YF0_D 1N8J_C 1YEP_D 1YEX_D 2V41_H 2V32_C ....
Probab=35.52 E-value=9.7 Score=25.52 Aligned_cols=15 Identities=27% Similarity=0.689 Sum_probs=12.1
Q ss_pred ceeeeeeecCCCCcc
Q 023311 112 AIGTEIEWYPGKCLT 126 (284)
Q Consensus 112 ~~gt~I~Wk~GknlT 126 (284)
...||.+|++|.++-
T Consensus 9 ~v~tPanW~pGd~~i 23 (40)
T PF10417_consen 9 GVATPANWKPGDDVI 23 (40)
T ss_dssp SSBBCTTTCTTSGEB
T ss_pred CcccCcCCCCCCCeE
Confidence 357999999998764
No 23
>PF03344 Daxx: Daxx Family; InterPro: IPR005012 Daxx is a ubiquitously expressed protein that functions, in part, as a transcriptional co-repressor through its interaction with a growing number of nuclear, DNA-associated proteins. Human Daxx contains four structural domains commonly found in transcriptional regulatory proteins: two predicted paired amphipathic helices, an acid-rich domain and a Ser/Pro/Thr (SPT)-rich domain. The post-translational modification status of the SPT-domain of hDaxx regulates its association with transcription factors such as Pax3 and ETS-1, effectively bringing hDaxx to sites of active transcription. Through its presence at the site of active transcription, hDaxx could then be able to associate with acetylated histones present in the nucleosomes and Dek that is associated with chromatin. Through its association with the SPT-domain of hDaxx, histone deacetylases may also be brought to the site of active transcription. As a consequence, nucleosomes in the vicinity of the site of active transcription will have the histone tails deacetylated, allowing the deactylated tail to bind to DNA, thereby leading to an inactive chromatin structure and transcriptional repression []. The Daxx protein (also known as the Fas-binding protein) is thought to play a role in apoptosis as a component of nuclear promyelocytic leukemia protein (PML) oncogenic domains (PODS). Daxx associates with PODs through a direct interaction with PML, a critical component of PODs. The interaction is a dynamic, cell cycle regulated event and is dependent on the post-translational modification of PML by the small ubiquitin-related modifier SUMO-1. ; PDB: 2KZS_A 2KZU_A.
Probab=32.12 E-value=15 Score=39.18 Aligned_cols=10 Identities=10% Similarity=0.026 Sum_probs=0.0
Q ss_pred ceEEEEEeCC
Q 023311 77 GFKLEFYFDP 86 (284)
Q Consensus 77 gfkL~F~F~~ 86 (284)
.+.-.|+|..
T Consensus 263 ~~~~~i~~~~ 272 (713)
T PF03344_consen 263 VIEQPIHFRG 272 (713)
T ss_dssp ----------
T ss_pred cccccccccc
Confidence 4444555544
No 24
>PF06784 UPF0240: Uncharacterised protein family (UPF0240); InterPro: IPR009622 This is a group of proteins of unknown function.
Probab=27.81 E-value=38 Score=30.00 Aligned_cols=33 Identities=24% Similarity=0.340 Sum_probs=30.0
Q ss_pred HHHHhcChhhhhhhchhhHHhhccccceEEEEe
Q 023311 40 LTAMKNNDVLSEEITERDEGALKFLKDIKWFRI 72 (284)
Q Consensus 40 l~vl~Nh~~ls~~I~e~De~iLkyL~DI~ve~~ 72 (284)
-.++..||.+...|...|..+|+.|++|.|+..
T Consensus 41 ~~~~~~~pe~~eei~~Kd~~L~s~LK~VyV~S~ 73 (179)
T PF06784_consen 41 EEVLEDDPEIKEEISRKDDKLLSRLKDVYVTSK 73 (179)
T ss_pred HHHhhhChHHHHHHHhhhHHHHHhhceeEeecC
Confidence 567899999999999999999999999999865
No 25
>PF03344 Daxx: Daxx Family; InterPro: IPR005012 Daxx is a ubiquitously expressed protein that functions, in part, as a transcriptional co-repressor through its interaction with a growing number of nuclear, DNA-associated proteins. Human Daxx contains four structural domains commonly found in transcriptional regulatory proteins: two predicted paired amphipathic helices, an acid-rich domain and a Ser/Pro/Thr (SPT)-rich domain. The post-translational modification status of the SPT-domain of hDaxx regulates its association with transcription factors such as Pax3 and ETS-1, effectively bringing hDaxx to sites of active transcription. Through its presence at the site of active transcription, hDaxx could then be able to associate with acetylated histones present in the nucleosomes and Dek that is associated with chromatin. Through its association with the SPT-domain of hDaxx, histone deacetylases may also be brought to the site of active transcription. As a consequence, nucleosomes in the vicinity of the site of active transcription will have the histone tails deacetylated, allowing the deactylated tail to bind to DNA, thereby leading to an inactive chromatin structure and transcriptional repression []. The Daxx protein (also known as the Fas-binding protein) is thought to play a role in apoptosis as a component of nuclear promyelocytic leukemia protein (PML) oncogenic domains (PODS). Daxx associates with PODs through a direct interaction with PML, a critical component of PODs. The interaction is a dynamic, cell cycle regulated event and is dependent on the post-translational modification of PML by the small ubiquitin-related modifier SUMO-1. ; PDB: 2KZS_A 2KZU_A.
Probab=27.10 E-value=21 Score=38.16 Aligned_cols=9 Identities=11% Similarity=-0.001 Sum_probs=0.0
Q ss_pred ccccccccc
Q 023311 151 ESFFNFFNP 159 (284)
Q Consensus 151 ~SFFnfF~~ 159 (284)
..|=.+|..
T Consensus 346 ~~~~~~lt~ 354 (713)
T PF03344_consen 346 YNFGCHLTD 354 (713)
T ss_dssp ---------
T ss_pred ccccccccc
Confidence 344455544
No 26
>KOG1991 consensus Nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=25.54 E-value=31 Score=38.02 Aligned_cols=9 Identities=33% Similarity=0.966 Sum_probs=4.6
Q ss_pred cccccc-ccc
Q 023311 150 CESFFN-FFN 158 (284)
Q Consensus 150 ~~SFFn-fF~ 158 (284)
..+||. ||.
T Consensus 816 ~~~ff~~wf~ 825 (1010)
T KOG1991|consen 816 LNNFFTLWFQ 825 (1010)
T ss_pred cccHHHHHHH
Confidence 345554 664
No 27
>KOG2038 consensus CAATT-binding transcription factor/60S ribosomal subunit biogenesis protein [Translation, ribosomal structure and biogenesis; Transcription]
Probab=25.38 E-value=43 Score=36.33 Aligned_cols=7 Identities=29% Similarity=1.151 Sum_probs=3.7
Q ss_pred cccc-ccc
Q 023311 152 SFFN-FFN 158 (284)
Q Consensus 152 SFFn-fF~ 158 (284)
-||. ||+
T Consensus 804 ~fFhry~~ 811 (988)
T KOG2038|consen 804 LFFHRYYS 811 (988)
T ss_pred HHHHHHhh
Confidence 4665 554
No 28
>KOG3540 consensus Beta amyloid precursor protein [General function prediction only]
Probab=23.82 E-value=63 Score=33.21 Aligned_cols=13 Identities=23% Similarity=0.611 Sum_probs=11.1
Q ss_pred ccccchhhhhccc
Q 023311 194 KIIPHAVSWFTGE 206 (284)
Q Consensus 194 ~IiP~Av~yftge 206 (284)
-|.|-++.-|+|.
T Consensus 172 mLlPCg~D~F~Gv 184 (615)
T KOG3540|consen 172 MLLPCGLDMFRGV 184 (615)
T ss_pred ceeccccccccCc
Confidence 4789999999994
Done!