Query 023311
Match_columns 284
No_of_seqs 202 out of 640
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 04:41:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023311.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023311hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ayu_A Nucleosome assembly pro 100.0 1.4E-70 4.8E-75 532.1 9.0 210 1-212 131-369 (417)
2 3fs3_A Nucleosome assembly pro 100.0 1.6E-58 5.5E-63 438.8 11.4 199 1-212 90-298 (359)
3 2zd7_A VPS75, vacuolar protein 100.0 7.5E-54 2.6E-58 394.3 4.4 164 29-210 48-223 (264)
4 2e50_A Protein SET; histone ch 100.0 6.6E-49 2.3E-53 354.0 9.6 151 27-204 70-221 (225)
5 3kyp_A Pfnaps, nucleosome asse 100.0 1.7E-47 5.8E-52 337.6 5.7 150 27-207 40-192 (193)
6 2ayu_A Nucleosome assembly pro 82.3 0.61 2.1E-05 45.1 2.6 9 276-284 409-417 (417)
7 2zd7_A VPS75, vacuolar protein 66.6 1.4 4.9E-05 39.8 0.5 12 1-12 43-54 (264)
8 4fp9_B Mterf domain-containing 62.9 1.5 5.3E-05 40.9 0.0 10 150-159 241-250 (335)
9 4fp9_B Mterf domain-containing 49.6 3.5 0.00012 38.5 0.0 7 41-47 97-103 (335)
10 2eln_A Zinc finger protein 406 37.9 13 0.00045 23.1 1.4 13 271-283 2-14 (38)
11 1fv5_A First zinc finger of U- 27.0 25 0.00085 21.6 1.3 12 272-283 2-13 (36)
12 1x3c_A Zinc finger protein 292 20.8 72 0.0024 23.4 2.9 13 271-283 20-32 (73)
No 1
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A {Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A
Probab=100.00 E-value=1.4e-70 Score=532.08 Aligned_cols=210 Identities=40% Similarity=0.754 Sum_probs=174.0
Q ss_pred ChhhhhhhhcccccCCccccccchh--------------------hhhccccCCCCchHHHHHhcChhhhhhhchhhHHh
Q 023311 1 MYTKRYEIVNGVVEGAPNEVAMDQE--------------------EDKATEEKGVPDFWLTAMKNNDVLSEEITERDEGA 60 (284)
Q Consensus 1 ly~kR~~Iv~G~~e~~~~e~~~~~~--------------------~~~~~~~k~IP~FWl~vl~Nh~~ls~~I~e~De~i 60 (284)
||+||++||+|.++|+.+|..+... ......++|||+||++||+||++|+.||+++|++|
T Consensus 131 Ly~KR~eII~G~~ept~eE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kgIP~FWltalkN~~~lse~I~e~De~i 210 (417)
T 2ayu_A 131 IWEQRSRIISGQEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQVKGIPSFWLTALENLPIVCDTITDRDAEV 210 (417)
T ss_dssp HHHHHHHHHHTSSCCCHHHHHHHHHHHHHTTCGGGCCSSCC---------CCSSCTTHHHHHHHTSTTGGGTCCHHHHTG
T ss_pred HHHHHHHHHcCCCCCchhhhcccccccchhhhhhhhhhhhhhcccccccccccCCccHHHHHHHcChHHHHhhhhhhHHH
Confidence 6999999999999999665432110 11223469999999999999999999999999999
Q ss_pred hccccceEEEEeCC-CCceEEEEEe--CCCCCccCceEEEEEEecCC----CCcceecceeeeeeecC-CCCcchhhhhc
Q 023311 61 LKFLKDIKWFRIDD-PKGFKLEFYF--DPNPYFKNSVLTKTYHMIDE----DEPILEKAIGTEIEWYP-GKCLTQKLLKK 132 (284)
Q Consensus 61 LkyL~DI~ve~~ed-~~gfkL~F~F--~~NpYF~N~vLtK~y~~~~~----~~p~~~~~~gt~I~Wk~-GknlT~k~~kK 132 (284)
|+||+||+|+++.+ +.||+|+||| .+||||+|++|||+|+|... |.+++.+++||+|+||+ |||||+++++|
T Consensus 211 Lk~L~DI~Ve~~~d~~~gF~L~F~F~~~~NpYF~N~vLtKtY~~~~e~~~~g~~~~~~~egt~I~WK~~GknlT~k~~kk 290 (417)
T 2ayu_A 211 LEYLQDIGLEYLTDGRPGFKLLFRFDSSANPFFTNDILCKTYFYQKELGYSGDFIYDHAEGCEISWKDNAHNVTVDLEMR 290 (417)
T ss_dssp GGGEEEEECCBCCSSSCEEEEEEEECTTTCSSBCCSEEEEEEEEESSCCSSSSCEEEEEEECCCCBSCTTTCTTEEEEEC
T ss_pred HhhccceEEEEccCCCcceEEEEEeCCCCCccccCCeEEEEEEEeccCCCCCCcccccccCcceeeecCCCCcchhhhhh
Confidence 99999999999875 5699999999 99999999999999999854 33455679999999999 99999999988
Q ss_pred cCC-CCCCCCcccccccccccccccccccCCCCCCCCCChhHHHHHHHhhhhcccchhhhccccccchhhhhcccccccc
Q 023311 133 KPK-KGSKNAKPITKTEECESFFNFFNPPQVPEDDEDIDEDTAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQEE 211 (284)
Q Consensus 133 k~k-k~~k~~r~i~k~~~~~SFFnfF~~~~~p~~~~~~dee~~eel~~~l~~D~eIg~~I~d~IiP~Av~yftgea~~~d 211 (284)
|+| |+++++|+|++++++.||||||+++.+|.+++ +++..++++++|+.||+||++|+++|||+||.||||+|++.+
T Consensus 291 Kqr~K~~~~~R~v~k~v~~~SFFnfFspp~~p~~de--de~~~ee~e~~l~~DfeIG~~Ikd~IiP~AV~yftGea~~~e 368 (417)
T 2ayu_A 291 KQRNKTTKQVRTIEKITPIESFFNFFDPPKIQNEDQ--DEELEEDLEERLALDYSIGEQLKDKLIPRAVDWFTGAALEFE 368 (417)
T ss_dssp CC---------CCEEEEECCCGGGGGSCSCSCCCTT--SSSTTHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHSHHHHHH
T ss_pred cccccCCCcccccccCCCCCCceeecCCCCCCCccc--cccchHHHHHHHHHHHHHHHHHHhhccccHHHHhcccccccc
Confidence 876 67788899999999999999999999988653 222345688999999999999999999999999999999886
Q ss_pred c
Q 023311 212 E 212 (284)
Q Consensus 212 d 212 (284)
+
T Consensus 369 ~ 369 (417)
T 2ayu_A 369 F 369 (417)
T ss_dssp H
T ss_pred c
Confidence 5
No 2
>3fs3_A Nucleosome assembly protein 1, putative; protein localization, histone recognition, structural analysis, CHA; 2.30A {Plasmodium falciparum} PDB: 3hfd_A 3gyw_A 3gyv_A
Probab=100.00 E-value=1.6e-58 Score=438.83 Aligned_cols=199 Identities=39% Similarity=0.697 Sum_probs=143.8
Q ss_pred ChhhhhhhhcccccCCccccccchhhhhccccCCCCchHHHHHhcChhhhhhhchhhHHhhccccceEEEEeC----CCC
Q 023311 1 MYTKRYEIVNGVVEGAPNEVAMDQEEDKATEEKGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRID----DPK 76 (284)
Q Consensus 1 ly~kR~~Iv~G~~e~~~~e~~~~~~~~~~~~~k~IP~FWl~vl~Nh~~ls~~I~e~De~iLkyL~DI~ve~~e----d~~ 76 (284)
||+||++||+|.++.. ...++||+||++||+||++|+.+|+++|++||+||++|+|+++. .++
T Consensus 90 LyeKR~eII~G~~e~e-------------~~~kgIP~FWltvl~Nhp~ls~~I~e~De~iL~yL~DI~Ve~l~~~~~~~~ 156 (359)
T 3fs3_A 90 IYDKRREALVGNGEAK-------------IGTPNLPEFWLRALRNNNTVSHVIEDHDEEILVYLNDIRCDYIKKNKEKKE 156 (359)
T ss_dssp HHHHHHHHHHC---CC-------------SSSTTSTTHHHHHHHTSHHHHTTCCHHHHHHHTTEEEEEEEECC-------
T ss_pred HHHHHHHHHcCccccc-------------cccCCCCcHHHHHHHhchHHHHhccHhHHHHHhhcceeEEEEeccCCCCCC
Confidence 6999999999975431 23579999999999999999999999999999999999999863 467
Q ss_pred ceEEEEEeCCCCCccCceEEEEEEecCC---CCcceecceeeeeeecCCCCcchhhhhccCC-CCCCCCccccccccccc
Q 023311 77 GFKLEFYFDPNPYFKNSVLTKTYHMIDE---DEPILEKAIGTEIEWYPGKCLTQKLLKKKPK-KGSKNAKPITKTEECES 152 (284)
Q Consensus 77 gfkL~F~F~~NpYF~N~vLtK~y~~~~~---~~p~~~~~~gt~I~Wk~GknlT~k~~kKk~k-k~~k~~r~i~k~~~~~S 152 (284)
||+|+|+|.+||||+|++|||+|+|... ++|++..++||+|+||+|||||+++++||+| |+++.+|++++++++.|
T Consensus 157 gfkI~F~F~eNpYF~N~vLtKey~l~~~~~~~dp~~~~se~t~I~WK~GKdlT~k~~~kKqr~K~t~~~R~v~k~~~~eS 236 (359)
T 3fs3_A 157 GFILSFYFATNPFFSNSVLTKTYHMKCVDCDNEPVLLHTEATVIDWYDNKNILKKNVVKKQHNKNSREVKTVQQTVNRDS 236 (359)
T ss_dssp CEEEEEEECSCSSBCCSEEEEEEEEC--------CEEEEEECCCCBCTTCCTTCC----------------------CCC
T ss_pred ceEEEEEeCCCCcccCCEEEEEEEEeccCCCCCcccccceeeeeeEeCCCccchhhhhhhccccCCCCceeeeccCCCCC
Confidence 9999999999999999999999999853 4577778999999999999999999887766 56778899999999999
Q ss_pred ccccccccCCCCCCC--CCChhHHHHHHHhhhhcccchhhhccccccchhhhhccccccccc
Q 023311 153 FFNFFNPPQVPEDDE--DIDEDTAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQEEE 212 (284)
Q Consensus 153 FFnfF~~~~~p~~~~--~~dee~~eel~~~l~~D~eIg~~I~d~IiP~Av~yftgea~~~dd 212 (284)
|||||++|.+|++++ +++++++++++++|+.||+||++||++|||+||.||||+|+++++
T Consensus 237 FFnfFspp~~p~~de~~~~de~~~~~~e~~l~~DfeIGe~Ikd~IiP~av~yftGea~e~e~ 298 (359)
T 3fs3_A 237 FFHFFTSHKVPNSNVIKQLSKHEVAQLEMIIEGDYEVALTIKERIIPYAVDYYLGIIIESES 298 (359)
T ss_dssp GGGGSCCBCC------------CHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCC-----
T ss_pred ceeeCCCCCCCCcccccccchhhhHHHHHHHHHhHHHHHHHHhceecChHHhhCCccccccc
Confidence 999999999997664 345556778999999999999999999999999999999998875
No 3
>2zd7_A VPS75, vacuolar protein sorting-associated protein 75; histone chaperone, VPS75, NAP1, nucleus, phosphoprotein; 1.85A {Saccharomyces cerevisiae} PDB: 3q66_A* 3q68_A* 3c9d_A 3c9b_A 3q33_B* 3q35_B* 3dm7_A
Probab=100.00 E-value=7.5e-54 Score=394.28 Aligned_cols=164 Identities=18% Similarity=0.337 Sum_probs=134.5
Q ss_pred ccccCCCCchHHHHHhcChhhhhhhchhhHHhhccccceEEEEe------CCCCceEEEEEeCC-CCCccCceEEEEEEe
Q 023311 29 ATEEKGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRI------DDPKGFKLEFYFDP-NPYFKNSVLTKTYHM 101 (284)
Q Consensus 29 ~~~~k~IP~FWl~vl~Nh~~ls~~I~e~De~iLkyL~DI~ve~~------ed~~gfkL~F~F~~-NpYF~N~vLtK~y~~ 101 (284)
.++|+|||+||++||+||++|+.+|+++|++||+||++|+|+++ ..++||+|+|+|.+ ||||+|++|||+|+|
T Consensus 48 ~eII~~IP~FWltal~n~~~l~~~I~e~De~iL~~L~dI~v~~~~~~~~~~~~~gf~i~F~F~~~NpyF~N~vLtK~y~~ 127 (264)
T 2zd7_A 48 DAYIDEIAEFWKIVLSQHVSFANYIRASDFKYIDTIDKIKVEWLALESEMYDTRDFSITFHFHGIEGDFKEQQVTKVFQI 127 (264)
T ss_dssp HHHHTTCTTHHHHHHHHSTTGGGGSCGGGHHHHTTEEEEEEEEGGGTCTTSCTTCEEEEEEECCBTTTBCCEEEEEEEEE
T ss_pred HHHHhcchhHHHHHHHcChHHHhhcCHhhHHHHHhcCceEEEEecccccCCCCCceEEEEEeCCCCCCccCCeEEEEEEe
Confidence 33334799999999999999999999999999999999999996 46779999999999 999999999999999
Q ss_pred cCC--C-CcceecceeeeeeecCCC-CcchhhhhccC-CCCCCCCcccccccccccccccccccCCCCCCCCCChhHHHH
Q 023311 102 IDE--D-EPILEKAIGTEIEWYPGK-CLTQKLLKKKP-KKGSKNAKPITKTEECESFFNFFNPPQVPEDDEDIDEDTAEE 176 (284)
Q Consensus 102 ~~~--~-~p~~~~~~gt~I~Wk~Gk-nlT~k~~kKk~-kk~~k~~r~i~k~~~~~SFFnfF~~~~~p~~~~~~dee~~ee 176 (284)
... + .+.+.+|+||+|+||+|+ ++|+++++||+ +++++++|+ .+.||||||+++.+|...
T Consensus 128 ~~~~dg~~~~~~~s~~t~I~WK~g~~~~~~~~~~kk~~~~~~~~~r~-----~~~SFF~fF~~~~~~~~~---------- 192 (264)
T 2zd7_A 128 KKGKDDQEDGILTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQ-----GMKTIFGWFRWTGLKPGK---------- 192 (264)
T ss_dssp ECCSSSCCCCEEEECCCCCCCCGGGGGGCTTTCSCSSSHHHHHHHHH-----HHTSHHHHTTCCSSSTTS----------
T ss_pred cccCCCCCCCceeEeecccccCCCccccchhhhhhccccccccccCC-----CCCCcceecCCCCCCccc----------
Confidence 864 3 243458999999999975 66777665543 233333232 357999999999877532
Q ss_pred HHHhhhhcccchhhhccccccchhhhhccccccc
Q 023311 177 LQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQE 210 (284)
Q Consensus 177 l~~~l~~D~eIg~~I~d~IiP~Av~yftgea~~~ 210 (284)
.+..+|+||++|+++||||||+||||++.+.
T Consensus 193 ---~~~~d~eig~~Ikd~I~P~al~yf~g~~~d~ 223 (264)
T 2zd7_A 193 ---EFPHGDSLASLFSEEIYPFCVKYYAEAQRDL 223 (264)
T ss_dssp ---SSTTHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred ---cccCchhHHHHHHhhhccCHHHHhccccccc
Confidence 1456899999999999999999999987764
No 4
>2e50_A Protein SET; histone chaperone, inhat, PP2AI, protein binding; HET: TRE; 2.30A {Homo sapiens} SCOP: d.305.1.1
Probab=100.00 E-value=6.6e-49 Score=353.96 Aligned_cols=151 Identities=32% Similarity=0.679 Sum_probs=107.8
Q ss_pred hhccccCCCCchHHHHHhcChhhhhhhchhhHHhhccccceEEEEeCCC-CceEEEEEeCCCCCccCceEEEEEEecCCC
Q 023311 27 DKATEEKGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRIDDP-KGFKLEFYFDPNPYFKNSVLTKTYHMIDED 105 (284)
Q Consensus 27 ~~~~~~k~IP~FWl~vl~Nh~~ls~~I~e~De~iLkyL~DI~ve~~ed~-~gfkL~F~F~~NpYF~N~vLtK~y~~~~~~ 105 (284)
.|.+.|++||+||++||+||++|+.+|+++|++||+||+||+|++++++ .||+|+|+|.+||||+|++|||+|+|...|
T Consensus 70 kR~eII~~IP~FW~tal~n~~~l~~~i~e~De~iL~~L~dI~v~~~~d~~~gf~i~F~F~~N~yF~N~vLtK~y~~~~~g 149 (225)
T 2e50_A 70 KRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEAMHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHMNESG 149 (225)
T ss_dssp HHHHHHTTSTTHHHHHHHTSHHHHTTCCHHHHHHGGGEEEEEEEECCSSCCCEEEEEEECSCSSBSCSEEEEEEC-----
T ss_pred HHHHHHhccccHHHHHHhcChhhhhhccHhHHHHHHhcCeeEEEEccCCCCceEEEEEeCCCCCccCCEEEEEEEecCCC
Confidence 3444456899999999999999999999999999999999999998765 499999999999999999999999999877
Q ss_pred CcceecceeeeeeecCCCCcchhhhhccCCCCCCCCcccccccccccccccccccCCCCCCCCCChhHHHHHHHhhhhcc
Q 023311 106 EPILEKAIGTEIEWYPGKCLTQKLLKKKPKKGSKNAKPITKTEECESFFNFFNPPQVPEDDEDIDEDTAEELQNQMEQDY 185 (284)
Q Consensus 106 ~p~~~~~~gt~I~Wk~GknlT~k~~kKk~kk~~k~~r~i~k~~~~~SFFnfF~~~~~p~~~~~~dee~~eel~~~l~~D~ 185 (284)
+| +++||+|+||+|||||+++++|+++++++ |+ .+++.||||||+++..|+ .+
T Consensus 150 ~~---~s~~t~I~Wk~gkd~t~~~~~kk~~~~~~--r~---~~~~~SFF~fF~~~~~~~-------------------~~ 202 (225)
T 2e50_A 150 DP---SSKSTEIKWKSGKDMTKRSSQTQNKASRK--RQ---HEEPESFFTWFTDHSDAG-------------------AD 202 (225)
T ss_dssp -----CEEECCCCBCSSCCC---------------------------CGGGGC-------------------------CH
T ss_pred Cc---ccCCCcceecCCCCccchhhhhcccccCc--cc---CCCCCCcceecCCCCCCc-------------------hh
Confidence 76 58999999999999999987766655433 32 245789999999986552 25
Q ss_pred cchhhhccccccchhhhhc
Q 023311 186 DIGSTIRDKIIPHAVSWFT 204 (284)
Q Consensus 186 eIg~~I~d~IiP~Av~yft 204 (284)
+||++|+++|||+||+|||
T Consensus 203 eige~ikd~i~P~av~yy~ 221 (225)
T 2e50_A 203 ELGEVIKDDIWPNPLQYYL 221 (225)
T ss_dssp HHHHHHHHTTTTCSHHHHC
T ss_pred HHHHHHHhCccccHHHHhc
Confidence 8999999999999999998
No 5
>3kyp_A Pfnaps, nucleosome assembly protein; histone recognition, chaperone; 2.80A {Plasmodium falciparum}
Probab=100.00 E-value=1.7e-47 Score=337.56 Aligned_cols=150 Identities=20% Similarity=0.394 Sum_probs=115.4
Q ss_pred hhccccCCCCchHHHHHhcChhhhhhhchhhHHhhccccceEEEEeCC-CCceEEEEEeCC--CCCccCceEEEEEEecC
Q 023311 27 DKATEEKGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRIDD-PKGFKLEFYFDP--NPYFKNSVLTKTYHMID 103 (284)
Q Consensus 27 ~~~~~~k~IP~FWl~vl~Nh~~ls~~I~e~De~iLkyL~DI~ve~~ed-~~gfkL~F~F~~--NpYF~N~vLtK~y~~~~ 103 (284)
.|.+.+++||+||++||+|||+|+.++ ++|++||+||+||+|++..+ +.||+|+|+|.+ ||||+|++|||+|++..
T Consensus 40 kR~~iI~~IP~FW~t~l~n~~~ls~i~-~~De~~L~~L~di~v~~~~~~~~gf~i~F~F~~n~N~yF~N~vLtK~y~~~~ 118 (193)
T 3kyp_A 40 KRDEIIQKIPGFWANTLRKHPALSDIV-PEDIDILNHLVKLDLKDNMDNNGSYKITFIFGEKAKEFMEPLTLVKHVTFDN 118 (193)
T ss_dssp HHHHHHHTSTTTTHHHHTTSSSSTTSS-CHHHHTTCCCCEECCBCCSSSSCCCEEEEECSCCSSCSCSCEEEECCCCCC-
T ss_pred HHHHHhcCCccHHHHHHHcCchHHHHH-HhhHHHHcCcceEEEEEccCCCCceEEEEEEcCCCCccccCceEEEEEEEcC
Confidence 444555589999999999999999865 79999999999999998644 569999999998 89999999999999988
Q ss_pred CCCcceecceeeeeeecCCCCcchhhhhccCCCCCCCCcccccccccccccccccccCCCCCCCCCChhHHHHHHHhhhh
Q 023311 104 EDEPILEKAIGTEIEWYPGKCLTQKLLKKKPKKGSKNAKPITKTEECESFFNFFNPPQVPEDDEDIDEDTAEELQNQMEQ 183 (284)
Q Consensus 104 ~~~p~~~~~~gt~I~Wk~GknlT~k~~kKk~kk~~k~~r~i~k~~~~~SFFnfF~~~~~p~~~~~~dee~~eel~~~l~~ 183 (284)
+|.++ +++|+|+||+|||||+++.+|++ +++++.++.||||||+++.+|+
T Consensus 119 ~g~~~---~~~t~I~Wk~gk~~t~~~~~kr~--------~~~~~~~~~SFF~wF~~~~~~~------------------- 168 (193)
T 3kyp_A 119 NQEKV---VECTRIKWKEGKNPIAAVTHNRS--------DLDNEIPKWSIFEWFTTDELQD------------------- 168 (193)
T ss_dssp ---CC---CCCCCCCCCSSCCCCC----------------------CCCTTTTCCSSCCTT-------------------
T ss_pred CCCee---eccceeeeecCCCcchhhhhccc--------cccccCCcchHhhhcCCCCcCC-------------------
Confidence 77654 67899999999999977544322 2445568899999999987663
Q ss_pred cccchhhhccccccchhhhhcccc
Q 023311 184 DYDIGSTIRDKIIPHAVSWFTGEA 207 (284)
Q Consensus 184 D~eIg~~I~d~IiP~Av~yftgea 207 (284)
+++||++|+++||||||+||||+.
T Consensus 169 ~~eige~ikd~i~P~~l~yy~ge~ 192 (193)
T 3kyp_A 169 KPDVGELIRREIWHNPLSYYLGLE 192 (193)
T ss_dssp TTCTTHHHHTTTTTCHHHHHC---
T ss_pred chHHHHHHHhCeeeCHHHHhCCCC
Confidence 458999999999999999999974
No 6
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A {Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A
Probab=82.32 E-value=0.61 Score=45.07 Aligned_cols=9 Identities=67% Similarity=1.265 Sum_probs=0.0
Q ss_pred CCCcccccC
Q 023311 276 ERPPECKQQ 284 (284)
Q Consensus 276 ~~~~~c~~q 284 (284)
++|||||||
T Consensus 409 ~~~~eckq~ 417 (417)
T 2ayu_A 409 EQAPECKQS 417 (417)
T ss_dssp ---------
T ss_pred CCchhccCC
Confidence 489999998
No 7
>2zd7_A VPS75, vacuolar protein sorting-associated protein 75; histone chaperone, VPS75, NAP1, nucleus, phosphoprotein; 1.85A {Saccharomyces cerevisiae} PDB: 3q66_A* 3q68_A* 3c9d_A 3c9b_A 3q33_B* 3q35_B* 3dm7_A
Probab=66.59 E-value=1.4 Score=39.80 Aligned_cols=12 Identities=25% Similarity=0.592 Sum_probs=9.7
Q ss_pred Chhhhhhhhccc
Q 023311 1 MYTKRYEIVNGV 12 (284)
Q Consensus 1 ly~kR~~Iv~G~ 12 (284)
||+||++||+|.
T Consensus 43 ly~kR~eII~~I 54 (264)
T 2zd7_A 43 VYEKRDAYIDEI 54 (264)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHhcc
Confidence 588888888875
No 8
>4fp9_B Mterf domain-containing protein 2; modification enzyme, transferase; HET: SAM; 2.90A {Homo sapiens}
Probab=62.87 E-value=1.5 Score=40.88 Aligned_cols=10 Identities=0% Similarity=-0.064 Sum_probs=4.5
Q ss_pred cccccccccc
Q 023311 150 CESFFNFFNP 159 (284)
Q Consensus 150 ~~SFFnfF~~ 159 (284)
.+|.-+.+..
T Consensus 241 npsL~~il~~ 250 (335)
T 4fp9_B 241 NPLLKDILRV 250 (335)
T ss_dssp CCCHHHHTTS
T ss_pred CccHHHHHcC
Confidence 3444444443
No 9
>4fp9_B Mterf domain-containing protein 2; modification enzyme, transferase; HET: SAM; 2.90A {Homo sapiens}
Probab=49.59 E-value=3.5 Score=38.46 Aligned_cols=7 Identities=14% Similarity=0.340 Sum_probs=3.3
Q ss_pred HHHhcCh
Q 023311 41 TAMKNND 47 (284)
Q Consensus 41 ~vl~Nh~ 47 (284)
++|+.+|
T Consensus 97 kiL~k~P 103 (335)
T 4fp9_B 97 VVLKKSP 103 (335)
T ss_dssp HHHHHCG
T ss_pred HHHHhCh
Confidence 3444454
No 10
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.95 E-value=13 Score=23.05 Aligned_cols=13 Identities=8% Similarity=0.143 Sum_probs=9.8
Q ss_pred CCCCCCCCccccc
Q 023311 271 DAQQGERPPECKQ 283 (284)
Q Consensus 271 ~~~~~~~~~~c~~ 283 (284)
+...|++|+.|.+
T Consensus 2 ~~~~gekp~~C~~ 14 (38)
T 2eln_A 2 SSGSSGILLKCPT 14 (38)
T ss_dssp CCSSCCCCEECSS
T ss_pred CCCCCCCCCCCCC
Confidence 3456899999974
No 11
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=27.03 E-value=25 Score=21.60 Aligned_cols=12 Identities=8% Similarity=-0.047 Sum_probs=9.3
Q ss_pred CCCCCCCccccc
Q 023311 272 AQQGERPPECKQ 283 (284)
Q Consensus 272 ~~~~~~~~~c~~ 283 (284)
+..|++|+.|.+
T Consensus 2 ~~~gekp~~C~~ 13 (36)
T 1fv5_A 2 SLLKPARFMCLP 13 (36)
T ss_dssp CSSSCCCCEETT
T ss_pred CCCCccCeECCC
Confidence 345899999975
No 12
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=20.84 E-value=72 Score=23.38 Aligned_cols=13 Identities=23% Similarity=0.365 Sum_probs=10.2
Q ss_pred CCCCCCCCccccc
Q 023311 271 DAQQGERPPECKQ 283 (284)
Q Consensus 271 ~~~~~~~~~~c~~ 283 (284)
-+..|++|+.|.+
T Consensus 20 ~~~sGEKPYkC~~ 32 (73)
T 1x3c_A 20 TRYSPYRPYRCVH 32 (73)
T ss_dssp SSSCSSCSCBCCS
T ss_pred ccccCCCCeECCC
Confidence 3467999999974
Done!