BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023312
(284 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6P7K5|EMC10_XENTR ER membrane protein complex subunit 10 OS=Xenopus tropicalis
GN=emc10 PE=2 SV=1
Length = 263
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 32/210 (15%)
Query: 62 TTTRRKVSD-QDSDSK-IQFSLEHAFGDSDFVPAGTFSAR--LKTSSHGGQTLTKLRFSR 117
+ R K D +DS+S LEH+F D + F R L S Q+++ L+
Sbjct: 37 SVCRLKTGDGRDSESCGTNLELEHSFELDDSIH---FKKRGSLIWSGTAEQSISILQ--- 90
Query: 118 NAFTGEDKEKFEKLLQDDDFYRIRLPSNT-VSPPGRDYIISSVKAEGV------------ 164
T +++ K + + YRIR+P ++ +Y+ S V+A +
Sbjct: 91 KQLTEDERNKLRDIANLNGLYRIRVPRKLGITEEANEYVTSFVRACSMVESHLSDQISVH 150
Query: 165 -----NILAVNYGAF-GACSYPRQLKLPHKWSFNSHTVLKN--SEQAPRAPIFAEEVLGE 216
N++ ++ F G+C+ + + FN+ ++ + P F E + E
Sbjct: 151 TDISGNVVGISIVTFPGSCNGAEVEDVDLEM-FNTTVYIQQPIAAAVPETAAFIERLEME 209
Query: 217 NGEGEIIPPPERSFWAKYWMYLIPLGLIVI 246
+ P ++SF+AKYWMY+IP+ L ++
Sbjct: 210 QAQKAKNPQEQKSFFAKYWMYIIPVVLFLM 239
>sp|A5D8P8|EMC10_XENLA ER membrane protein complex subunit 10 OS=Xenopus laevis GN=emc10
PE=2 SV=1
Length = 267
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 34/211 (16%)
Query: 62 TTTRRKVSD--QDSDSKIQFSLEHAF--GDS-DFVPAGTFSARLKTSSHGGQTLTKLRFS 116
+ R K D + LEH+F DS DF G+ L S Q+++ L+
Sbjct: 41 SVCRLKTGDGRESESCGTNLELEHSFELDDSIDFKKRGS----LFWSGTAEQSISILQ-- 94
Query: 117 RNAFTGEDKEKFEKLLQDDDFYRIRLPSNT-VSPPGRDYIISSVKAEGV----------- 164
T +++ K + + YRIR+P +S +Y+ S V+A +
Sbjct: 95 -KQLTEDERNKLRDIANLNGLYRIRIPRKLGISEEVNEYVTSFVRACSMVESHLSDEITV 153
Query: 165 ------NILAVNYGAF-GACSYPRQLKLPHKWSFNSHTVLKN--SEQAPRAPIFAEEVLG 215
N++ V+ F G+C+ + + FN+ ++ + P F E +
Sbjct: 154 HTDISGNVIGVSIVTFPGSCNGAEVEDVDLEM-FNTTVHIQQPIAAAVPETAAFIERLEM 212
Query: 216 ENGEGEIIPPPERSFWAKYWMYLIPLGLIVI 246
E + P ++SF+AKYWMY+IP+ L ++
Sbjct: 213 EQAQKAKNPQEQKSFFAKYWMYIIPVVLFLM 243
>sp|A1A4M2|EMC10_BOVIN ER membrane protein complex subunit 10 OS=Bos taurus GN=EMC10 PE=2
SV=1
Length = 262
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 77/192 (40%), Gaps = 27/192 (14%)
Query: 77 IQFSLEHAFGDSDFVPAGTFSARLKTSSHGGQTLTKLRFSRNAFTGEDKEKFEKLLQDDD 136
+ LEH+F D + R + S Q L S+ E++ + + +
Sbjct: 52 VGLLLEHSFEIDD-----SAHFRKRGSLLWNQQDGTLSLSQRQLNEEERGRLRDVAALNG 106
Query: 137 FYRIRLPSNTVSPPGRD---YIISSVKAEGV-----------------NILAVNYGAFGA 176
YR+R+P +P G + Y+ S V A + N++ V+ +
Sbjct: 107 LYRVRVPRRPGAPDGPEAGGYVSSFVPACSLVESHLSDQLTLHVDVAGNVVGVSVVTYPG 166
Query: 177 CSYPRQLKLPHKWSFNSHTVLKNSEQAP--RAPIFAEEVLGENGEGEIIPPPERSFWAKY 234
+++ FN+ L+ AP F E + E + P ++SF+AKY
Sbjct: 167 GCRGHEVEDVDLELFNTSVQLQPPVTAPGPETAAFIERLEMEQAQKAKNPQEQKSFFAKY 226
Query: 235 WMYLIPLGLIVI 246
WMY++P+ L ++
Sbjct: 227 WMYIVPVVLFLM 238
>sp|A7E2M3|EMC10_DANRE ER membrane protein complex subunit 10 OS=Danio rerio GN=emc10 PE=2
SV=1
Length = 257
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 33/215 (15%)
Query: 65 RRKVSDQDSD-SKIQFSLEHAFGDSDFVPAGTFSARLKTSSHGGQTLTKLRFSRNAFTGE 123
RR D+D S LEH+F + D VP F R GG+ + S+N + +
Sbjct: 31 RRSGDAVDTDFSGFSVPLEHSF-EVDDVP--RFRLRGALQFRGGRE-NSVYLSQNQLSEK 86
Query: 124 DKEKFEKLLQDDDFYRIRLPSNTVSPPGRD------YIISSVKAEGV------NILAVNY 171
D+ + + D YRIR+P ++ + Y+ + V+A + +++ ++
Sbjct: 87 DRNTLKDVAAVDGLYRIRVPRVSLQVDRQTERQYEGYLTAFVRACALVESHLSDVITLHT 146
Query: 172 GAFGACSYPRQLKLPHKWS------------FNSHTVLKNSEQAP---RAPIFAEEVLGE 216
G + +P FN+ + AP AP + E + E
Sbjct: 147 DVSGYVIGISIVTIPGSCRGIEVEDEVDLEVFNTTISVMAPVTAPVPETAP-YIERMEME 205
Query: 217 NGEGEIIPPPERSFWAKYWMYLIPLGLIVINAVTQ 251
+ P ++SF+AKYWMY++PL L ++ + Q
Sbjct: 206 MEKKGKNPQEQKSFFAKYWMYIVPLVLFLMMSGAQ 240
>sp|Q5UCC4|EMC10_HUMAN ER membrane protein complex subunit 10 OS=Homo sapiens GN=EMC10
PE=1 SV=1
Length = 262
Score = 39.7 bits (91), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 77/192 (40%), Gaps = 27/192 (14%)
Query: 77 IQFSLEHAFGDSDFVPAGTFSARLKTSSHGGQTLTKLRFSRNAFTGEDKEKFEKLLQDDD 136
+ LEH+F D + + R + S Q L S+ + E++ + + +
Sbjct: 52 VGLLLEHSFEIDD-----SANFRKRGSLLWNQQDGTLSLSQRQLSEEERGRLRDVAALNG 106
Query: 137 FYRIRLPSNTVSPPGRD---YIISSVKAEGV-----------------NILAVNYGAFGA 176
YR+R+P + G + Y+ S V A + N++ V+
Sbjct: 107 LYRVRIPRRPGALDGLEAGGYVSSFVPACSLVESHLSDQLTLHVDVAGNVVGVSVVTHPG 166
Query: 177 CSYPRQLKLPHKWSFNSHTVLK--NSEQAPRAPIFAEEVLGENGEGEIIPPPERSFWAKY 234
+++ FN+ L+ + P F E + E + P ++SF+AKY
Sbjct: 167 GCRGHEVEDVDLELFNTSVQLQPPTTAPGPETAAFIERLEMEQAQKAKNPQEQKSFFAKY 226
Query: 235 WMYLIPLGLIVI 246
WMY+IP+ L ++
Sbjct: 227 WMYIIPVVLFLM 238
>sp|Q3TAS6|EMC10_MOUSE ER membrane protein complex subunit 10 OS=Mus musculus GN=Emc10
PE=2 SV=2
Length = 258
Score = 38.5 bits (88), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 191 FNSHTVLK--NSEQAPRAPIFAEEVLGENGEGEIIPPPERSFWAKYWMYLIPLGLIVI 246
FN+ L+ ++ P F E + E + P ++SF+AKYWMY+IP+ L ++
Sbjct: 181 FNTSVQLRPPSTAPGPETAAFIERLEMEQAQKAKNPQEQKSFFAKYWMYIIPVVLFLM 238
>sp|Q6AYH6|EMC10_RAT ER membrane protein complex subunit 10 OS=Rattus norvegicus
GN=Emc10 PE=1 SV=1
Length = 258
Score = 37.7 bits (86), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 191 FNSHTVLK--NSEQAPRAPIFAEEVLGENGEGEIIPPPERSFWAKYWMYLIPLGLIVI 246
FN+ L+ + P F E + E + P ++SF+AKYWMY+IP+ L ++
Sbjct: 181 FNTSVHLRPPGTAPGPETAAFIERLEMEQAQKAKNPQEQKSFFAKYWMYIIPVVLFLM 238
>sp|Q5RFD6|CBPM_PONAB Carboxypeptidase M OS=Pongo abelii GN=CPM PE=2 SV=1
Length = 443
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 174 FGACSYPRQLKLPHKWSFNSHTVLKNSEQAP---RAPIFAE------EVLGENGEGEIIP 224
C YPR+ KLP W+ N ++++ +Q + +F + +V+ E + + I
Sbjct: 282 LSCCKYPREEKLPSFWNNNKASLIEYIKQVHLGVKGQVFDQNGNPLPDVIVEVQDRKHIC 341
Query: 225 PPERSFWAKYWMYLIPLGLIVINAVT 250
P + + +Y++ L+P G +IN
Sbjct: 342 PYRTNKYGEYYLLLLP-GSYIINVTV 366
>sp|A1TI06|SYL_MYCVP Leucine--tRNA ligase OS=Mycobacterium vanbaalenii (strain DSM 7251
/ PYR-1) GN=leuS PE=3 SV=1
Length = 968
Score = 32.3 bits (72), Expect = 4.5, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 199 NSEQAPRAPIF-AEEVLGENGEGEIIPPPERSFWAKYWMYLIPLGLIVINAVTQAMNMPE 257
N A + P+F A+ VL G G I+ P + W + GL +I V + P
Sbjct: 406 NPANAKQVPVFIADYVLAGYGTGAIMAVPGGD--QRDWDFATEFGLPIIEVVRPVADRPG 463
Query: 258 EGVQGGGQTQQSA 270
E GG Q+A
Sbjct: 464 EDTGAGGDVSQAA 476
>sp|P14384|CBPM_HUMAN Carboxypeptidase M OS=Homo sapiens GN=CPM PE=1 SV=2
Length = 443
Score = 31.6 bits (70), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 174 FGACSYPRQLKLPHKWSFNSHTVLKNSEQAP---RAPIFAE------EVLGENGEGEIIP 224
C YPR+ KLP W+ N ++++ +Q + +F + V+ E + + I
Sbjct: 282 LSCCKYPREEKLPSFWNNNKASLIEYIKQVHLGVKGQVFDQNGNPLPNVIVEVQDRKHIC 341
Query: 225 PPERSFWAKYWMYLIPLGLIVINAVT 250
P + + +Y++ L+P G +IN
Sbjct: 342 PYRTNKYGEYYLLLLP-GSYIINVTV 366
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,012,402
Number of Sequences: 539616
Number of extensions: 5011106
Number of successful extensions: 11985
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 11975
Number of HSP's gapped (non-prelim): 16
length of query: 284
length of database: 191,569,459
effective HSP length: 116
effective length of query: 168
effective length of database: 128,974,003
effective search space: 21667632504
effective search space used: 21667632504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)