Your job contains 1 sequence.
>023313
MLERHLLERPAKIGVGANRAATAASFIEKYGYVDPRDCASSQKNCINPKVGSHLKSGKIG
AVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLI
SEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSA
NAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKDYDR
DPEILMHLEAYKVLVLCSKLQIIPCRGCTEDSFKLLLKELVDVK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023313
(284 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2085765 - symbol:LpxK "AT3G20480" species:3702... 792 8.7e-79 1
UNIPROTKB|Q9KQX0 - symbol:lpxK "Tetraacyldisaccharide 4'-... 159 5.9e-12 2
TIGR_CMR|VC_1877 - symbol:VC_1877 "tetraacyldisaccharide ... 159 5.9e-12 2
TIGR_CMR|CPS_2126 - symbol:CPS_2126 "tetraacyldisaccharid... 164 5.9e-10 1
TIGR_CMR|CBU_0857 - symbol:CBU_0857 "tetraacyldisaccharid... 125 3.4e-09 2
TIGR_CMR|SO_2801 - symbol:SO_2801 "tetraacyldisaccharide ... 149 8.4e-09 2
TIGR_CMR|GSU_2258 - symbol:GSU_2258 "tetraacyldisaccharid... 141 3.4e-07 1
UNIPROTKB|P27300 - symbol:lpxK species:83333 "Escherichia... 131 2.1e-06 2
TIGR_CMR|SPO_3445 - symbol:SPO_3445 "tetraacyldisaccharid... 129 7.6e-06 1
>TAIR|locus:2085765 [details] [associations]
symbol:LpxK "AT3G20480" species:3702 "Arabidopsis
thaliana" [GO:0009029 "tetraacyldisaccharide 4'-kinase activity"
evidence=ISS;IMP] [GO:0009245 "lipid A biosynthetic process"
evidence=ISS] [GO:0016020 "membrane" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:2001289 "lipid X metabolic
process" evidence=IMP] [GO:0019243 "methylglyoxal catabolic process
to D-lactate" evidence=RCA] HAMAP:MF_00409 InterPro:IPR003758
Pfam:PF02606 GO:GO:0005739 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009245 EMBL:AP000410
UniPathway:UPA00359 EMBL:AY085541 IPI:IPI00530617
RefSeq:NP_566663.1 UniGene:At.38229 ProteinModelPortal:Q8LEA0
SMR:Q8LEA0 STRING:Q8LEA0 PaxDb:Q8LEA0 EnsemblPlants:AT3G20480.1
GeneID:821594 KEGG:ath:AT3G20480 TAIR:At3g20480 eggNOG:COG1663
HOGENOM:HOG000030676 InParanoid:Q8LEA0 OMA:GFQHRKL PhylomeDB:Q8LEA0
ProtClustDB:CLSN2688599 Genevestigator:Q8LEA0 GO:GO:0009029
TIGRFAMs:TIGR00682 Uniprot:Q8LEA0
Length = 395
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 163/284 (57%), Positives = 203/284 (71%)
Query: 1 MLERHLLERPAKIGVGANRAATAASFIEKYGYVDPRDCASSQKNCINPKVGSHLKSGKIG 60
MLERHL P KIGVGANRAATAA F++KYG VD S ++ + S KIG
Sbjct: 109 MLERHLRGGPVKIGVGANRAATAALFLDKYGCVDSSSLRSFFD--LHERAQVWTISEKIG 166
Query: 61 AVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLI 120
+ILDDGMQHWSL RDLEIVM+NGL PWGN L+P GPLREPL+AL+RAD+AVVHH DLI
Sbjct: 167 CIILDDGMQHWSLSRDLEIVMLNGLNPWGNGHLMPHGPLREPLLALERADVAVVHHVDLI 226
Query: 121 SEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSA 180
++Q+L+DIE ++ KKS+ IF+++MVP YLF+V N S + L A+ A+VLCVSAIGSA
Sbjct: 227 TKQSLRDIENMIQGFKKSIPIFYSKMVPKYLFDVKNARSHVALEALRCASVLCVSAIGSA 286
Query: 181 NAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIXXXXXXXXGKFNPKPIVVVTEKDYDR 240
+AFV+S++ G V+RLDF+DHH F+A D+E + K N KPI+VVTEKDYDR
Sbjct: 287 DAFVKSIEMTGAHYVDRLDFSDHHLFEAEDVETMSRRAKGLEHKSNCKPIIVVTEKDYDR 346
Query: 241 DPEILMHLEAYKVLVLCSKLQIIPCRGCTEDSFKLLLKELVDVK 284
DPEIL L++Y VLVLCS+LQI P DSF L + + K
Sbjct: 347 DPEILKCLDSYTVLVLCSELQITPILETDVDSFNYTLMKALAAK 390
>UNIPROTKB|Q9KQX0 [details] [associations]
symbol:lpxK "Tetraacyldisaccharide 4'-kinase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0009029 "tetraacyldisaccharide 4'-kinase activity"
evidence=ISS] [GO:0009245 "lipid A biosynthetic process"
evidence=ISS] HAMAP:MF_00409 InterPro:IPR003758 Pfam:PF02606
GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0009245
UniPathway:UPA00359 eggNOG:COG1663 GO:GO:0009029 TIGRFAMs:TIGR00682
KO:K00912 ProtClustDB:PRK00652 OMA:PDHYDFA PIR:C82146
RefSeq:NP_231511.1 DNASU:2613631 GeneID:2613631 KEGG:vch:VC1877
PATRIC:20082796 Uniprot:Q9KQX0
Length = 336
Score = 159 (61.0 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 27/62 (43%), Positives = 46/62 (74%)
Query: 54 LKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAV 113
L+ G + ++ DDG+QH++L+RD+EI +V+G+ +GN++L+PLGPLREP+ L D +
Sbjct: 140 LEHG-VNVIVTDDGLQHYALQRDIEIAVVDGVRRFGNQELIPLGPLREPVSRLDEVDFII 198
Query: 114 VH 115
+
Sbjct: 199 TN 200
Score = 59 (25.8 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 165 AVCNANVLCVSA-IGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMI 214
AV LC A IG + F +L++L V+ F DH +F A + +
Sbjct: 228 AVSKLTRLCAMAGIGHPSRFFNTLRELNADLVHCQGFADHQAFDAAQLNQL 278
>TIGR_CMR|VC_1877 [details] [associations]
symbol:VC_1877 "tetraacyldisaccharide 4`-kinase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0009029
"tetraacyldisaccharide 4'-kinase activity" evidence=ISS]
[GO:0009245 "lipid A biosynthetic process" evidence=ISS]
HAMAP:MF_00409 InterPro:IPR003758 Pfam:PF02606 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0009245
UniPathway:UPA00359 eggNOG:COG1663 GO:GO:0009029 TIGRFAMs:TIGR00682
KO:K00912 ProtClustDB:PRK00652 OMA:PDHYDFA PIR:C82146
RefSeq:NP_231511.1 DNASU:2613631 GeneID:2613631 KEGG:vch:VC1877
PATRIC:20082796 Uniprot:Q9KQX0
Length = 336
Score = 159 (61.0 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 27/62 (43%), Positives = 46/62 (74%)
Query: 54 LKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAV 113
L+ G + ++ DDG+QH++L+RD+EI +V+G+ +GN++L+PLGPLREP+ L D +
Sbjct: 140 LEHG-VNVIVTDDGLQHYALQRDIEIAVVDGVRRFGNQELIPLGPLREPVSRLDEVDFII 198
Query: 114 VH 115
+
Sbjct: 199 TN 200
Score = 59 (25.8 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 165 AVCNANVLCVSA-IGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMI 214
AV LC A IG + F +L++L V+ F DH +F A + +
Sbjct: 228 AVSKLTRLCAMAGIGHPSRFFNTLRELNADLVHCQGFADHQAFDAAQLNQL 278
>TIGR_CMR|CPS_2126 [details] [associations]
symbol:CPS_2126 "tetraacyldisaccharide 4'-kinase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0009029
"tetraacyldisaccharide 4'-kinase activity" evidence=ISS]
[GO:0009245 "lipid A biosynthetic process" evidence=ISS]
HAMAP:MF_00409 InterPro:IPR003758 Pfam:PF02606 GO:GO:0005524
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0009245
UniPathway:UPA00359 eggNOG:COG1663 GO:GO:0009029 TIGRFAMs:TIGR00682
KO:K00912 RefSeq:YP_268852.1 STRING:Q483B5 GeneID:3519196
KEGG:cps:CPS_2126 PATRIC:21467367 HOGENOM:HOG000004953 OMA:PDHYDFA
BioCyc:CPSY167879:GI48-2196-MONOMER Uniprot:Q483B5
Length = 343
Score = 164 (62.8 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 57/179 (31%), Positives = 91/179 (50%)
Query: 42 QKNCINP-KVGS-HLKSGKI----GA--VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKL 93
Q+ C P VGS + S K+ G +I DDG+QH+ L RDLE+V+V+G +GN L
Sbjct: 120 QQRCQVPIAVGSDRIASAKLLIAQGCDIIISDDGLQHYRLARDLELVVVDGKRLFGNGLL 179
Query: 94 LPLGPLREPLMALKRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFE 153
LP GPLRE L L ++D+ V+++ +N +D + +K+ + + L
Sbjct: 180 LPAGPLREGLWRLPKSDL-VIYNG-----KNDQDYQ------EKNYPCMHMTLAATELCN 227
Query: 154 VGNINSKIPLTAVCNAN--VLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARD 210
+ +I LT N V ++ IG+ F +L++ +N+ F DHH+F D
Sbjct: 228 LLT-GERIYLTDFIRLNDSVNAIAGIGAPQRFFDTLKEHQFKVINQQSFVDHHAFVLAD 285
>TIGR_CMR|CBU_0857 [details] [associations]
symbol:CBU_0857 "tetraacyldisaccharide 4'-kinase"
species:227377 "Coxiella burnetii RSA 493" [GO:0009029
"tetraacyldisaccharide 4'-kinase activity" evidence=ISS]
[GO:0009245 "lipid A biosynthetic process" evidence=ISS]
HAMAP:MF_00409 InterPro:IPR003758 Pfam:PF02606 GO:GO:0005524
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0009245
UniPathway:UPA00359 eggNOG:COG1663 GO:GO:0009029 TIGRFAMs:TIGR00682
KO:K00912 ProtClustDB:PRK00652 HOGENOM:HOG000004953 OMA:PDHYDFA
RefSeq:NP_819876.1 GeneID:1208750 KEGG:cbu:CBU_0857 PATRIC:17930413
BioCyc:CBUR227377:GJ7S-852-MONOMER Uniprot:Q83D83
Length = 325
Score = 125 (49.1 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 28/60 (46%), Positives = 37/60 (61%)
Query: 54 LKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAV 113
L++ + VI DDG+QH+SL RDLEI +++ GN + LP GPLREP L D V
Sbjct: 138 LRNFQCDVVIGDDGLQHYSLGRDLEIALLDD-RHLGNGRCLPAGPLREPKSRLNTVDFVV 196
Score = 73 (30.8 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 22/90 (24%), Positives = 42/90 (46%)
Query: 148 PSYLFEVGNINSKIPLTAVCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQ 207
P+ ++++ N KI + V V+ IG+ F + L+ LG +V F DH+ ++
Sbjct: 202 PNEIYQLKNPAKKIDFNELKELTVHAVAGIGNPGYFFKQLETLG-ANVIAHPFRDHYFYR 260
Query: 208 ARDIEMIXXXXXXXXGKFNPKPIVVVTEKD 237
+ D F+ ++++TEKD
Sbjct: 261 SEDFN------------FDDDHLIILTEKD 278
>TIGR_CMR|SO_2801 [details] [associations]
symbol:SO_2801 "tetraacyldisaccharide 4-kinase"
species:211586 "Shewanella oneidensis MR-1" [GO:0009029
"tetraacyldisaccharide 4'-kinase activity" evidence=ISS]
[GO:0009245 "lipid A biosynthetic process" evidence=ISS]
HAMAP:MF_00409 InterPro:IPR003758 Pfam:PF02606 GO:GO:0005524
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0009245
UniPathway:UPA00359 eggNOG:COG1663 GO:GO:0009029 TIGRFAMs:TIGR00682
KO:K00912 ProtClustDB:PRK00652 HOGENOM:HOG000004953 OMA:PDHYDFA
RefSeq:NP_718379.1 GeneID:1170501 KEGG:son:SO_2801 PATRIC:23525239
Uniprot:Q8EDF1
Length = 335
Score = 149 (57.5 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 59 IGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHAD 118
+ +I DDG+QH++L RD+E+V+++G GNR LLP GPLRE L + D +V+
Sbjct: 142 VDVIICDDGLQHYALGRDIELVVIDGKRGLGNRNLLPAGPLREGEWRLNQVDFVIVNGGP 201
Query: 119 LISEQ 123
++ Q
Sbjct: 202 AVANQ 206
Score = 41 (19.5 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 9/41 (21%), Positives = 20/41 (48%)
Query: 171 VLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDI 211
++ ++ IG F ++L + G F+DH ++ R +
Sbjct: 233 LVAMAGIGHPARFFETLTQQGYQVALSHSFDDHQAYDKRQL 273
>TIGR_CMR|GSU_2258 [details] [associations]
symbol:GSU_2258 "tetraacyldisaccharide 4'-kinase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0009029
"tetraacyldisaccharide 4'-kinase activity" evidence=ISS]
[GO:0009245 "lipid A biosynthetic process" evidence=ISS]
HAMAP:MF_00409 InterPro:IPR003758 Pfam:PF02606 GO:GO:0005524
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0009245
UniPathway:UPA00359 eggNOG:COG1663 GO:GO:0009029 TIGRFAMs:TIGR00682
KO:K00912 RefSeq:NP_953307.1 GeneID:2685771 KEGG:gsu:GSU2258
PATRIC:22027371 HOGENOM:HOG000004954 OMA:KYYLSIG
ProtClustDB:CLSK828780 BioCyc:GSUL243231:GH27-2253-MONOMER
Uniprot:Q74AU2
Length = 353
Score = 141 (54.7 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 42/152 (27%), Positives = 70/152 (46%)
Query: 63 ILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLISE 122
ILDDG QH L RDL I++++ P GN + LP G LREP A++RAD+ V +
Sbjct: 160 ILDDGYQHLRLHRDLNILLMDCNRPLGNGRTLPAGLLREPQTAVRRADLVVYTRC---TG 216
Query: 123 QNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSANA 182
+ + + ++ ++P G + PL A+ + + I
Sbjct: 217 GKAPAVHGMIPSCRAGHALTGAALLPD-----GEVQ---PLAALRGLRGVACAGIAEPEG 268
Query: 183 FVQSLQKLGPCSVNRLDFNDHHSFQARDIEMI 214
F +L++ G V + F DH S+ R++ +
Sbjct: 269 FFDALRREGLDIVAAIPFADHASYGEREVSTL 300
>UNIPROTKB|P27300 [details] [associations]
symbol:lpxK species:83333 "Escherichia coli K-12"
[GO:0016020 "membrane" evidence=IDA] [GO:0009029
"tetraacyldisaccharide 4'-kinase activity" evidence=IEA;IMP;IDA]
[GO:0009245 "lipid A biosynthetic process" evidence=IEA;IMP;IDA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0009244
"lipopolysaccharide core region biosynthetic process" evidence=IMP]
HAMAP:MF_00409 InterPro:IPR003758 Pfam:PF02606 GO:GO:0005524
GO:GO:0016020 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009245 GO:GO:0009244
UniPathway:UPA00359 eggNOG:COG1663 GO:GO:0009029 TIGRFAMs:TIGR00682
KO:K00912 ProtClustDB:PRK00652 HOGENOM:HOG000004953 EMBL:Z11796
PIR:B64831 RefSeq:NP_415435.1 RefSeq:YP_489187.1
ProteinModelPortal:P27300 SMR:P27300 DIP:DIP-10126N IntAct:P27300
PRIDE:P27300 EnsemblBacteria:EBESCT00000003674
EnsemblBacteria:EBESCT00000018286 GeneID:12931020 GeneID:945526
KEGG:ecj:Y75_p0887 KEGG:eco:b0915 PATRIC:32117043 EchoBASE:EB1381
EcoGene:EG11409 OMA:DEPVLIH
BioCyc:EcoCyc:TETRAACYLDISACC4KIN-MONOMER
BioCyc:ECOL316407:JW0898-MONOMER
BioCyc:MetaCyc:TETRAACYLDISACC4KIN-MONOMER Genevestigator:P27300
Uniprot:P27300
Length = 328
Score = 131 (51.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVH 115
++ DDG+QH+ L RD+EIV+++G+ +GN LP GP+RE LK D +V+
Sbjct: 144 IVTDDGLQHYRLARDVEIVVIDGVRRFGNGWWLPAGPMRERAGRLKSVDAVIVN 197
Score = 39 (18.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 10/45 (22%), Positives = 19/45 (42%)
Query: 170 NVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMI 214
+V+ ++ IG F +L+ G + DH S D+ +
Sbjct: 231 HVVAMAGIGHPPRFFATLKMCGVQPEKCVPLADHQSLNHADVSAL 275
>TIGR_CMR|SPO_3445 [details] [associations]
symbol:SPO_3445 "tetraacyldisaccharide 4'-kinase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0009029
"tetraacyldisaccharide 4'-kinase activity" evidence=ISS]
[GO:0009245 "lipid A biosynthetic process" evidence=ISS]
HAMAP:MF_00409 InterPro:IPR003758 Pfam:PF02606 GO:GO:0005524
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0009245
UniPathway:UPA00359 eggNOG:COG1663 GO:GO:0009029 TIGRFAMs:TIGR00682
KO:K00912 ProtClustDB:PRK00652 OMA:DEPVLIH HOGENOM:HOG000004954
RefSeq:YP_168641.1 GeneID:3194962 KEGG:sil:SPO3445 PATRIC:23380351
Uniprot:Q5LMW7
Length = 333
Score = 129 (50.5 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMA-LKRADIAVVHHADLI 120
+ILDDG Q+ S+ +DL IV+V+ +GN + +P GPLREP+ L RAD+ V+ D
Sbjct: 140 IILDDGFQNPSVAKDLSIVVVDAAQGFGNGRCIPAGPLREPVATGLARADL-VLALGDAQ 198
Query: 121 SEQNLKD 127
+++ +D
Sbjct: 199 AQEQFRD 205
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 284 276 0.00079 115 3 11 22 0.46 33
33 0.41 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 599 (64 KB)
Total size of DFA: 197 KB (2112 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.06u 0.10s 22.16t Elapsed: 00:00:01
Total cpu time: 22.06u 0.10s 22.16t Elapsed: 00:00:01
Start: Thu May 9 20:05:41 2013 End: Thu May 9 20:05:42 2013