BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023313
(284 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LEA0|LPXK_ARATH Probable tetraacyldisaccharide 4'-kinase, mitochondrial
OS=Arabidopsis thaliana GN=LPXK PE=2 SV=1
Length = 395
Score = 323 bits (828), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 165/284 (58%), Positives = 208/284 (73%), Gaps = 2/284 (0%)
Query: 1 MLERHLLERPAKIGVGANRAATAASFIEKYGYVDPRDCASSQKNCINPKVGSHLKSGKIG 60
MLERHL P KIGVGANRAATAA F++KYG VD S ++ + S KIG
Sbjct: 109 MLERHLRGGPVKIGVGANRAATAALFLDKYGCVDSSSLRSFFD--LHERAQVWTISEKIG 166
Query: 61 AVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLI 120
+ILDDGMQHWSL RDLEIVM+NGL PWGN L+P GPLREPL+AL+RAD+AVVHH DLI
Sbjct: 167 CIILDDGMQHWSLSRDLEIVMLNGLNPWGNGHLMPHGPLREPLLALERADVAVVHHVDLI 226
Query: 121 SEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSA 180
++Q+L+DIE ++ KKS+ IF+++MVP YLF+V N S + L A+ A+VLCVSAIGSA
Sbjct: 227 TKQSLRDIENMIQGFKKSIPIFYSKMVPKYLFDVKNARSHVALEALRCASVLCVSAIGSA 286
Query: 181 NAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKDYDR 240
+AFV+S++ G V+RLDF+DHH F+A D+E + ++ + LE K N KPI+VVTEKDYDR
Sbjct: 287 DAFVKSIEMTGAHYVDRLDFSDHHLFEAEDVETMSRRAKGLEHKSNCKPIIVVTEKDYDR 346
Query: 241 DPEILMHLEAYKVLVLCSKLQIIPCRGCTEDSFKLLLKELVDVK 284
DPEIL L++Y VLVLCS+LQI P DSF L + + K
Sbjct: 347 DPEILKCLDSYTVLVLCSELQITPILETDVDSFNYTLMKALAAK 390
>sp|B8CZC3|LPXK_HALOH Tetraacyldisaccharide 4'-kinase OS=Halothermothrix orenii (strain H
168 / OCM 544 / DSM 9562) GN=lpxK PE=3 SV=1
Length = 384
Score = 114 bits (286), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 102/191 (53%), Gaps = 16/191 (8%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 121
+ILDDG QHW L+RD++IVM++GL P+G +L+P G LREPL LKRAD V+ A IS
Sbjct: 165 IILDDGFQHWQLKRDVDIVMIDGLKPFGQGRLIPRGFLREPLSGLKRADFFVISRAHHIS 224
Query: 122 EQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGN--------INSKIPLTAVCNANVLC 173
+ L++I+ + ++ ++ YL E+ I+ K PL + A V+
Sbjct: 225 REKLQEIKDTLCQYNQNAVVYEATTSSVYLKELSVASLEMKSIIHKKRPLDELKGAKVIA 284
Query: 174 VSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVV 233
V +G+ +F + L+ G + L FNDHH ++ D + I + IV+
Sbjct: 285 VCGLGNPRSFYRDLEISGAEVIETLSFNDHHQYRPDDFDKIINLARQ-----KAIDIVIT 339
Query: 234 TEKD---YDRD 241
TEKD + RD
Sbjct: 340 TEKDAVKFSRD 350
>sp|Q2IL55|LPXK_ANADE Tetraacyldisaccharide 4'-kinase OS=Anaeromyxobacter dehalogenans
(strain 2CP-C) GN=lpxK PE=3 SV=1
Length = 378
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 8/185 (4%)
Query: 61 AVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLI 120
A++LDDG QH +L RDL++V+++ P+GN LLP GP REP AL+RA + + HAD
Sbjct: 154 ALVLDDGFQHRALARDLDVVVLDASNPFGNGHLLPRGPNREPPSALRRAGLVWLSHADRA 213
Query: 121 SEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSA 180
+ + L+ + RD + +R P+ L + G + L A+ V +S +
Sbjct: 214 APERLEALRALARDATGRAPV-ESRHAPTALLD-GALREAGALEALRGRRVAALSGLARP 271
Query: 181 NAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKDYDR 240
F+++L+ LG F DHH F A +++ + + E + VV TEKD R
Sbjct: 272 AGFLRTLEALGAEVALARAFPDHHRFTAGELDAVLR-----EAAASGCAWVVTTEKDAVR 326
Query: 241 -DPEI 244
DP +
Sbjct: 327 LDPAL 331
>sp|B2KC48|LPXK_ELUMP Tetraacyldisaccharide 4'-kinase OS=Elusimicrobium minutum (strain
Pei191) GN=lpxK PE=3 SV=1
Length = 374
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 10/209 (4%)
Query: 54 LKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAV 113
LK K ++LDDG QH+ L+RD IV+++ P+G +LLP G LRE L LKRA++ +
Sbjct: 146 LKRFKSQVLLLDDGFQHFRLKRDANIVLIDARNPFGGGQLLPYGTLREGLSGLKRANLVL 205
Query: 114 VHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLC 173
+ H++ ++ +DI+ ++R + + I P + F++ N + K+PL +
Sbjct: 206 LTHSNQADQRKKEDIKDQIRLQNEDIEILEAVHQPEHYFDICN-SVKVPLNHL-KGEAGV 263
Query: 174 VSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVV 233
SAIG F +L+ LG V + DH + D+ K +L G+ NP +V
Sbjct: 264 FSAIGEPGGFEDTLKDLGLKLVKVWRYPDHRRYTEEDL----KTFVDLAGE-NP---LVT 315
Query: 234 TEKDYDRDPEILMHLEAYKVLVLCSKLQI 262
T KD+ + PE + V VL ++I
Sbjct: 316 TFKDFVKFPENWRDILKKNVYVLSVSMKI 344
>sp|B8JE66|LPXK_ANAD2 Tetraacyldisaccharide 4'-kinase OS=Anaeromyxobacter dehalogenans
(strain 2CP-1 / ATCC BAA-258) GN=lpxK PE=3 SV=1
Length = 379
Score = 94.4 bits (233), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 94/183 (51%), Gaps = 8/183 (4%)
Query: 61 AVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLI 120
A++LDDG QH +L RDL++V+++ P+GN LLP GP REP AL+RA + + HAD
Sbjct: 154 ALVLDDGFQHRALARDLDVVVLDASNPFGNGHLLPRGPNREPRTALRRAGLVWLSHADRA 213
Query: 121 SEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSA 180
+ + L+ + RD + +R + L + G + L A+ V +S +
Sbjct: 214 APERLEALRALARDATGRAPV-ESRHAATALLD-GALREAGSLEALRGRRVAALSGLARP 271
Query: 181 NAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKDYDR 240
F+++L+ LG F DHH F A ++E + + +G VV TEKD R
Sbjct: 272 AGFLRTLEALGAEVALARAFPDHHRFTAGELEAVLR-----DGDAAGCAWVVTTEKDAVR 326
Query: 241 -DP 242
DP
Sbjct: 327 LDP 329
>sp|B4UHQ4|LPXK_ANASK Tetraacyldisaccharide 4'-kinase OS=Anaeromyxobacter sp. (strain K)
GN=lpxK PE=3 SV=1
Length = 378
Score = 94.4 bits (233), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 61 AVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLI 120
A++LDDG QH +L RDL++V+++ P+GN LLP GP REP AL+RA + + HAD
Sbjct: 154 ALVLDDGFQHRALARDLDVVVLDASNPFGNGHLLPRGPNREPRTALRRAGLVWLSHADRA 213
Query: 121 SEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSA 180
+ + L+ + RD + +R P+ L + G + L A+ V +S +
Sbjct: 214 APERLEALRRLARDATGRAPV-ESRHAPTALLD-GALREAGSLEALRGRRVAALSGLARP 271
Query: 181 NAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKD 237
F+++L+ LG F DHH F ++E + + + + VV TEKD
Sbjct: 272 AGFLRTLEALGAEVALARAFPDHHRFTGGELEAVLRDADAAGCAW-----VVTTEKD 323
>sp|A0KLY1|LPXK_AERHH Tetraacyldisaccharide 4'-kinase OS=Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240) GN=lpxK PE=3
SV=1
Length = 333
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 93/183 (50%), Gaps = 32/183 (17%)
Query: 55 KSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVV 114
+SG++ +I DDG+QH++L RD+E+V+V+G +GN LLP+GPLREP+ LKR D +
Sbjct: 136 QSGEVDIIITDDGLQHYALARDIELVVVDGARRFGNACLLPMGPLREPVTRLKRVDAIIC 195
Query: 115 HHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCV 174
+ + E MR + VP + + PL A + V +
Sbjct: 196 NGGEPGRG------EYPMRLVAD---------VPR------RVRDEAPLAAPLSGPVDAL 234
Query: 175 SAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVT 234
+ IG F +L+ LG R+ + DHH F RD EL G+F KP+ ++T
Sbjct: 235 AGIGHPPRFFATLEGLGYQLDQRVAYGDHHPFD-RD---------ELVGRFAGKPL-LMT 283
Query: 235 EKD 237
EKD
Sbjct: 284 EKD 286
>sp|Q2LVL1|LPXK_SYNAS Tetraacyldisaccharide 4'-kinase OS=Syntrophus aciditrophicus
(strain SB) GN=lpxK PE=3 SV=1
Length = 374
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 97/191 (50%), Gaps = 20/191 (10%)
Query: 58 KIGA--VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLRE-PLMALKRADIAV- 113
++GA +ILDDG QH L RD+ IV+++ PWGN LLP GPLRE P AL+RADI +
Sbjct: 153 RMGADVLILDDGFQHRRLFRDINIVLLDSDRPWGNGFLLPRGPLREPPTRALRRADIVIR 212
Query: 114 ---VHHADLISEQNLKDIELEMRD----IKKSLSIFFTRMVPSYLFEVGNINSKIPLTAV 166
+H+ + ++E D + +S IF P L + + K+ L +
Sbjct: 213 TGGMHNR---TSGEAAGTQVETGDSGAVLLRSSPIFRGIHQPCALISL-DGGRKMDLQYL 268
Query: 167 CNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFN 226
+ + IG F ++L+ LG V L + DHH + + D+ I++ +E +
Sbjct: 269 AGERICAFAGIGVPEQFRKTLESLGAEIVEFLAYPDHHRYDSSDLAFIERTAKEARAE-- 326
Query: 227 PKPIVVVTEKD 237
++V TEKD
Sbjct: 327 ---MIVTTEKD 334
>sp|Q7UNW7|LPXK_RHOBA Tetraacyldisaccharide 4'-kinase OS=Rhodopirellula baltica (strain
SH1) GN=lpxK PE=3 SV=1
Length = 365
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 4/177 (2%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 121
+++DDG QH L+RDL+IV+++ P+G +LP G LREPL ++ RAD ++ D +
Sbjct: 140 LVMDDGFQHRRLQRDLDIVVIDATCPFGYGHVLPRGTLREPLDSVTRADWVLITRVDQVD 199
Query: 122 EQNLKDIELEMRDIKKSLSIFFTRMVPSYL-FEVGNINSKIPLTAVCNANVLCVSAIGSA 180
+ + I + + T PS + VG+ + + + + V VSAIG+
Sbjct: 200 PEEVLAIRSTIAQHAPDCPVLETEHRPSTIQSSVGDWEA---IEVLIDQPVALVSAIGNP 256
Query: 181 NAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKD 237
+AF Q++ G V+ L DH S++ E ++ + +L+G P ++ T KD
Sbjct: 257 DAFEQTVLDCGAIVVDHLRLPDHDSYERATREKLRSWVTKLKGGPQPPQRLLCTHKD 313
>sp|Q8A6K1|LPXK_BACTN Tetraacyldisaccharide 4'-kinase OS=Bacteroides thetaiotaomicron
(strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 /
VPI-5482) GN=lpxK PE=3 SV=1
Length = 380
Score = 84.3 bits (207), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 24/201 (11%)
Query: 54 LKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAV 113
+K I V+LDD QH ++ L I++ + + + LLP G LRE + RA I +
Sbjct: 132 IKEPSIEVVLLDDAFQHRYVKPGLSILLTDYHRLFCDDTLLPAGRLRESVNGKNRAQIVI 191
Query: 114 VHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNI-------NSKI----- 161
V Q++K I+ + I K L+++ + + F GN+ NS+I
Sbjct: 192 VTKC----PQDIKPIDYNI--ITKRLNLYPYQQLYFSSFRYGNLQPVFPSANSEIDSTVN 245
Query: 162 --PLTAVCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLE 219
PL+A+ N ++L V+ I S ++ L K+ ++ L F+DHH F RDI+ IK++
Sbjct: 246 ELPLSALTNTDILLVTGIASPAPILEEL-KMYTDQIDSLSFDDHHHFSHRDIQQIKERFG 304
Query: 220 ELEGKFNPKPIVVVTEKDYDR 240
+L+G+ ++V TEKD R
Sbjct: 305 KLKGEHK---LIVTTEKDATR 322
>sp|A0Q8A0|LPXK_FRATN Tetraacyldisaccharide 4'-kinase OS=Francisella tularensis subsp.
novicida (strain U112) GN=lpxK PE=3 SV=1
Length = 322
Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 82/155 (52%), Gaps = 14/155 (9%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 121
+I DDG+QH+ L RD EIV+V+ + +GN+ LP GPLREP+ LK D +V I
Sbjct: 145 IISDDGLQHYKLARDKEIVVVDAIRMFGNKLCLPAGPLREPIERLKEVDQIIV-----IG 199
Query: 122 EQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNI--NSKIPLTAVCNANVLCVSAIGS 179
+ KD EL +K ++ + ++V + E NI K+ T + NV+ ++ IG+
Sbjct: 200 NCSDKDKEL----LKNYKNVTYAKVVAT---EFVNILTAKKVAKTEFNHQNVIAIAGIGN 252
Query: 180 ANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMI 214
F ++L++ + F DHH F D E I
Sbjct: 253 PTKFFKTLEESAINITAKKVFKDHHKFTQSDFEGI 287
>sp|Q47909|LPXK_FRANO Tetraacyldisaccharide 4'-kinase OS=Francisella novicida GN=lpxK
PE=3 SV=1
Length = 322
Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 82/155 (52%), Gaps = 14/155 (9%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 121
+I DDG+QH+ L RD EIV+V+ + +GN+ LP GPLREP+ LK D +V I
Sbjct: 145 IISDDGLQHYKLARDKEIVVVDAIRMFGNKLCLPAGPLREPIERLKEVDQIIV-----IG 199
Query: 122 EQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNI--NSKIPLTAVCNANVLCVSAIGS 179
+ KD EL +K ++ + ++V + E NI K+ T + NV+ ++ IG+
Sbjct: 200 NCSDKDKEL----LKNYKNVTYAKVVAT---EFVNILTAKKVAKTEFNHQNVIAIAGIGN 252
Query: 180 ANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMI 214
F ++L++ + F DHH F D E I
Sbjct: 253 PTKFFKTLEESAINITAKKVFKDHHKFTQSDFEGI 287
>sp|Q1GZI1|LPXK_METFK Tetraacyldisaccharide 4'-kinase OS=Methylobacillus flagellatus
(strain KT / ATCC 51484 / DSM 6875) GN=lpxK PE=3 SV=1
Length = 335
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 31/176 (17%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 121
+I DDG+QH++L RD+EIV+++G +GN +LLP GPLREP L+ D V +
Sbjct: 150 IISDDGLQHYALERDMEIVIIDGERIFGNGQLLPAGPLREPSSRLEDVDAVVFNGG---- 205
Query: 122 EQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSAN 181
+ + +++P L +V ++ L + +V V+ IG+
Sbjct: 206 --------------PPAAGGYLMQLIPEDLRKVSAPQERMALNELIGQHVHAVAGIGNPQ 251
Query: 182 AFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKD 237
F L++LG V F DHH++ D E K IV++TEKD
Sbjct: 252 RFFGQLEQLG-LVVEAHPFPDHHAYTEDDFEFAKDD------------IVLMTEKD 294
>sp|A7HDI5|LPXK_ANADF Tetraacyldisaccharide 4'-kinase OS=Anaeromyxobacter sp. (strain
Fw109-5) GN=lpxK PE=3 SV=1
Length = 371
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 2/152 (1%)
Query: 61 AVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLI 120
A++LDDG QH +L RDL++V+++ P+GN LLP GP REP AL+RA + + D
Sbjct: 154 ALVLDDGFQHRALARDLDVVVLDAANPFGNGHLLPRGPNREPRAALRRAGLVWLSRVDQA 213
Query: 121 SEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSA 180
E L+ + + + +R P + + G + + A+ A VL +S +
Sbjct: 214 DEVALEALRALALEATGRAPV-ESRHAPVDVVD-GTLARSLGREALRGARVLALSGLARP 271
Query: 181 NAFVQSLQKLGPCSVNRLDFNDHHSFQARDIE 212
AF ++L LG V F DHH F R+++
Sbjct: 272 GAFRRTLADLGAEVVGERAFPDHHRFTDRELD 303
>sp|A4SL68|LPXK_AERS4 Tetraacyldisaccharide 4'-kinase OS=Aeromonas salmonicida (strain
A449) GN=lpxK PE=3 SV=1
Length = 331
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 40/187 (21%)
Query: 55 KSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVV 114
+SG++ +I DDG+QH+ L RD+E+V+V+G+ +GN LLP+GPLREP+ LKR D +
Sbjct: 136 QSGEVDIIITDDGLQHYGLARDIELVVVDGVRRFGNACLLPMGPLREPVTRLKRVDAIIC 195
Query: 115 HHADLISEQN----LKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNAN 170
+ + + + D+ +RD + + PL +A
Sbjct: 196 NGGEPAKGEYAMRLVADVPRRVRD---------------------DAQATEPLPRAVDA- 233
Query: 171 VLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPI 230
++ IG F +L LG ++ + DHH+F RD EL +F +P+
Sbjct: 234 ---LAGIGHPPRFFATLAGLGYELHQQVGYGDHHAFD-RD---------ELVARFGQRPL 280
Query: 231 VVVTEKD 237
++TEKD
Sbjct: 281 -LMTEKD 286
>sp|Q0BKJ4|LPXK_FRATO Tetraacyldisaccharide 4'-kinase OS=Francisella tularensis subsp.
holarctica (strain OSU18) GN=lpxK PE=3 SV=1
Length = 322
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 81/155 (52%), Gaps = 14/155 (9%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 121
++ DDG+QH+ L RD EIV+V+ + +GN+ LP GPLREP+ LK D +V I
Sbjct: 145 IMSDDGLQHYKLARDKEIVVVDAIRMFGNKLCLPAGPLREPIERLKEVDQIIV-----IG 199
Query: 122 EQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNI--NSKIPLTAVCNANVLCVSAIGS 179
+ KD EL +K ++ + ++V + E NI K+ T + N + ++ IG+
Sbjct: 200 NCSDKDKEL----LKNYKNVTYAKVVAT---EFVNILTAKKVAKTEFNHQNAIAIAGIGN 252
Query: 180 ANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMI 214
F ++L++ + F DHH F D E I
Sbjct: 253 PTKFFKTLEESAINITAKKVFKDHHKFTQSDFEGI 287
>sp|Q2A1V0|LPXK_FRATH Tetraacyldisaccharide 4'-kinase OS=Francisella tularensis subsp.
holarctica (strain LVS) GN=lpxK PE=3 SV=1
Length = 322
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 81/155 (52%), Gaps = 14/155 (9%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 121
++ DDG+QH+ L RD EIV+V+ + +GN+ LP GPLREP+ LK D +V I
Sbjct: 145 IMSDDGLQHYKLARDKEIVVVDAIRMFGNKLCLPAGPLREPIERLKEVDQIIV-----IG 199
Query: 122 EQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNI--NSKIPLTAVCNANVLCVSAIGS 179
+ KD EL +K ++ + ++V + E NI K+ T + N + ++ IG+
Sbjct: 200 NCSDKDKEL----LKNYKNVTYAKVVAT---EFVNILTAKKVAKTEFNHQNAIAIAGIGN 252
Query: 180 ANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMI 214
F ++L++ + F DHH F D E I
Sbjct: 253 PTKFFKTLEESAINITAKKVFKDHHKFTQSDFEGI 287
>sp|A7NE36|LPXK_FRATF Tetraacyldisaccharide 4'-kinase OS=Francisella tularensis subsp.
holarctica (strain FTNF002-00 / FTA) GN=lpxK PE=3 SV=2
Length = 322
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 81/155 (52%), Gaps = 14/155 (9%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 121
++ DDG+QH+ L RD EIV+V+ + +GN+ LP GPLREP+ LK D +V I
Sbjct: 145 IMSDDGLQHYKLARDKEIVVVDAIRMFGNKLCLPAGPLREPIERLKEVDQIIV-----IG 199
Query: 122 EQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNI--NSKIPLTAVCNANVLCVSAIGS 179
+ KD EL +K ++ + ++V + E NI K+ T + N + ++ IG+
Sbjct: 200 NCSDKDKEL----LKNYKNVTYAKVVAT---EFVNILTAKKVAKTEFNHQNAIAIAGIGN 252
Query: 180 ANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMI 214
F ++L++ + F DHH F D E I
Sbjct: 253 PTKFFKTLEESAINITAKKVFKDHHKFTQSDFEGI 287
>sp|A4IW67|LPXK_FRATW Tetraacyldisaccharide 4'-kinase OS=Francisella tularensis subsp.
tularensis (strain WY96-3418) GN=lpxK PE=3 SV=1
Length = 322
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 81/155 (52%), Gaps = 14/155 (9%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 121
++ DDG+QH+ L RD EIV+V+ + +GN+ LP GPLREP+ LK D +V I
Sbjct: 145 IMSDDGLQHYKLARDKEIVVVDAIRMFGNKLCLPAGPLREPIERLKEVDQIIV-----IG 199
Query: 122 EQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNI--NSKIPLTAVCNANVLCVSAIGS 179
+ KD EL +K ++ + ++V + E NI K+ T + N + ++ IG+
Sbjct: 200 NCSDKDKEL----LKNYKNVTYAKVVAT---EFVNILTAKKVAKTEFNHQNAIAIAGIGN 252
Query: 180 ANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMI 214
F ++L++ + F DHH F D E I
Sbjct: 253 PTKFFKTLEESAINITAKKVFKDHHKFTQSDFEGI 287
>sp|Q5NIG2|LPXK_FRATT Tetraacyldisaccharide 4'-kinase OS=Francisella tularensis subsp.
tularensis (strain SCHU S4 / Schu 4) GN=lpxK PE=3 SV=1
Length = 322
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 81/155 (52%), Gaps = 14/155 (9%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 121
++ DDG+QH+ L RD EIV+V+ + +GN+ LP GPLREP+ LK D +V I
Sbjct: 145 IMSDDGLQHYKLARDKEIVVVDAIRMFGNKLCLPAGPLREPIERLKEVDQIIV-----IG 199
Query: 122 EQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNI--NSKIPLTAVCNANVLCVSAIGS 179
+ KD EL +K ++ + ++V + E NI K+ T + N + ++ IG+
Sbjct: 200 NCSDKDKEL----LKNYKNVTYAKVVAT---EFVNILTAKKVAKTEFNHQNAIAIAGIGN 252
Query: 180 ANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMI 214
F ++L++ + F DHH F D E I
Sbjct: 253 PTKFFKTLEESAINITAKKVFKDHHKFTQSDFEGI 287
>sp|B2SF15|LPXK_FRATM Tetraacyldisaccharide 4'-kinase OS=Francisella tularensis subsp.
mediasiatica (strain FSC147) GN=lpxK PE=3 SV=1
Length = 322
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 81/155 (52%), Gaps = 14/155 (9%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 121
++ DDG+QH+ L RD EIV+V+ + +GN+ LP GPLREP+ LK D +V I
Sbjct: 145 IMSDDGLQHYKLARDKEIVVVDAIRMFGNKLCLPAGPLREPIERLKEVDQIIV-----IG 199
Query: 122 EQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNI--NSKIPLTAVCNANVLCVSAIGS 179
+ KD EL +K ++ + ++V + E NI K+ T + N + ++ IG+
Sbjct: 200 NCSDKDKEL----LKNYKNVTYAKVVAT---EFVNILTAKKVAKTEFNHQNAIAIAGIGN 252
Query: 180 ANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMI 214
F ++L++ + F DHH F D E I
Sbjct: 253 PTKFFKTLEESAINITAKKVFKDHHKFTQSDFEGI 287
>sp|Q14JW5|LPXK_FRAT1 Tetraacyldisaccharide 4'-kinase OS=Francisella tularensis subsp.
tularensis (strain FSC 198) GN=lpxK PE=3 SV=1
Length = 322
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 81/155 (52%), Gaps = 14/155 (9%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 121
++ DDG+QH+ L RD EIV+V+ + +GN+ LP GPLREP+ LK D +V I
Sbjct: 145 IMSDDGLQHYKLARDKEIVVVDAIRMFGNKLCLPAGPLREPIERLKEVDQIIV-----IG 199
Query: 122 EQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNI--NSKIPLTAVCNANVLCVSAIGS 179
+ KD EL +K ++ + ++V + E NI K+ T + N + ++ IG+
Sbjct: 200 NCSDKDKEL----LKNYKNVTYAKVVAT---EFVNILTAKKVAKTEFNHQNAIAIAGIGN 252
Query: 180 ANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMI 214
F ++L++ + F DHH F D E I
Sbjct: 253 PTKFFKTLEESAINITAKKVFKDHHKFTQSDFEGI 287
>sp|Q5QU37|LPXK_IDILO Tetraacyldisaccharide 4'-kinase OS=Idiomarina loihiensis (strain
ATCC BAA-735 / DSM 15497 / L2-TR) GN=lpxK PE=3 SV=1
Length = 329
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 33/180 (18%)
Query: 58 KIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHA 117
K+ +I DDG+QH++L+RD+E++M++ GN LLP GPLRE LK AD + ++
Sbjct: 142 KVDVIICDDGLQHYALKRDIELIMIDAERGTGNGWLLPAGPLREGPWRLKGADWVISNYG 201
Query: 118 DLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAI 177
+++ D+E P + V N N ++ L N V+ I
Sbjct: 202 RHAFARHVVDVE------------------PGNWYRVDN-NEQVALKTESKFN--AVAGI 240
Query: 178 GSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKD 237
G F SL + G N F DHH+F +D + NP +++TEKD
Sbjct: 241 GYPQRFFNSLIEQGIELENSQSFADHHAFSQQDFSNLAS---------NP---ILMTEKD 288
>sp|A1BDV6|LPXK_CHLPD Tetraacyldisaccharide 4'-kinase OS=Chlorobium phaeobacteroides
(strain DSM 266) GN=lpxK PE=3 SV=1
Length = 355
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 110/225 (48%), Gaps = 18/225 (8%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 121
+ILDD QH + R+L+IV++N P+ ++P G LREPL+ L RAD+ V+ S
Sbjct: 144 IILDDAFQHRQIARNLDIVVINEKEPYFRADMIPKGRLREPLINLARADLLVLSKITGGS 203
Query: 122 EQNLKDIELEM--RDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGS 179
++LE + + K+ + S +F N + P+ A A L + IGS
Sbjct: 204 TTAAISMDLEQTGKPVIKAGIAAGNLVCLSGMF---NTAKESPVHAGIKA--LAFAGIGS 258
Query: 180 ANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKDYD 239
+F+ +L+ G V+ F DH S+ A+ I ++ + +E K +V TEKDY
Sbjct: 259 PQSFIDTLEGQGIQIVSHRFFRDHESYTAKKIAALRLEADE------KKLTLVTTEKDYF 312
Query: 240 RDPEILMHLEAYKVL--VLCSKLQIIPCRGCTEDSFKLLLKELVD 282
R +L E ++L + C L+I P E K +L +++
Sbjct: 313 R---MLGQPELQEILHTLSCCYLKIRPEFTEGEKLLKTMLNAVIN 354
>sp|Q15UY6|LPXK_PSEA6 Tetraacyldisaccharide 4'-kinase OS=Pseudoalteromonas atlantica
(strain T6c / ATCC BAA-1087) GN=lpxK PE=3 SV=1
Length = 305
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 86/180 (47%), Gaps = 42/180 (23%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 121
+I DDG+QH++L+RD+EIV+++ GN LLP GPLRE L + D VV +
Sbjct: 127 IICDDGLQHYALQRDIEIVVMDAKRRTGNHFLLPSGPLRESTARLGQVDFVVV------N 180
Query: 122 EQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSAN 181
QN + E + + PS L + N + L+ + +A V+ + IG
Sbjct: 181 GQNTQSGE------------WLMSLAPSELVNLNNPTLHLALSEL-DAPVIAAAGIGHPE 227
Query: 182 AFVQSLQ----KLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKD 237
F + L+ KL C L F DHH+FQA D+ PK V++TEKD
Sbjct: 228 RFYKLLERHKVKLKSC----LSFVDHHAFQASDL---------------PKERVLMTEKD 268
>sp|Q5E0F1|LPXK_VIBF1 Tetraacyldisaccharide 4'-kinase OS=Vibrio fischeri (strain ATCC
700601 / ES114) GN=lpxK PE=3 SV=1
Length = 328
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 93/184 (50%), Gaps = 31/184 (16%)
Query: 54 LKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAV 113
L+ + +I DDG+QH++L+RD+E ++++G +GN+ +PLGPLRE + L D +
Sbjct: 138 LEQQGVDFIITDDGLQHYALQRDIEFIVIDGKRRFGNQHYIPLGPLREGVERLSSVDFLI 197
Query: 114 VHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLC 173
+ + S++N E+ M R+ PS E N+ + + +N++
Sbjct: 198 CNGGE--SQEN----EVSM------------RLQPS---EAINLVTGERRSVSSLSNLVA 236
Query: 174 VSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVV 233
+ IG F ++L +L V+ F DH +F+ +IE + + E+L ++
Sbjct: 237 FAGIGHPPRFFETLNQLKANVVHTQGFEDHKAFEPTEIEQLMQYGEQL----------IM 286
Query: 234 TEKD 237
TEKD
Sbjct: 287 TEKD 290
>sp|Q6MMX4|LPXK_BDEBA Tetraacyldisaccharide 4'-kinase OS=Bdellovibrio bacteriovorus
(strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
GN=lpxK PE=3 SV=1
Length = 339
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 9/180 (5%)
Query: 58 KIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHA 117
K +I+DDG QH L RDL IV+++ N ++LP G RE ++RAD+ ++
Sbjct: 130 KYDLLIVDDGFQHRRLHRDLNIVILDATESLSNYEVLPEGRARESWAGIERADVLILSKC 189
Query: 118 DLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAI 177
+L E LK +E + K+ L F + + G + + L + VSAI
Sbjct: 190 NLAPEDELKALEARLPKNKEVL-YFGYEIQQCQNVKTGQVLHRDELKG---KKLFLVSAI 245
Query: 178 GSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKD 237
+ F + ++++G S L F DHH + A D++ I+ ++ + + +V T KD
Sbjct: 246 ARPDVFEKMMREIGEVSNQSLHFRDHHQYTADDVKNIENAFKKSQADY-----LVTTGKD 300
>sp|Q21J10|LPXK_SACD2 Tetraacyldisaccharide 4'-kinase OS=Saccharophagus degradans (strain
2-40 / ATCC 43961 / DSM 17024) GN=lpxK PE=3 SV=1
Length = 361
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 54 LKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAV 113
LKS + ++ DDGMQH+ L RDLE+ +V+G +GN +LLP+GPLRE L+ + +
Sbjct: 140 LKSHAVDVILSDDGMQHYKLGRDLELALVDGERVFGNGQLLPVGPLREHPKRLQSVNWLL 199
Query: 114 VH-------HADLISEQNLKDIELEMR--DIKKSLSIFFTRMVPSYLFEVGNINSKIPLT 164
V+ +A L + + + EL + + K+ + F ++ L + + +
Sbjct: 200 VNGGSAEHVNARLQALEAINAAELSSKPNKLNKTPAPVFAQLEAVKLVNLATGKTLLLQN 259
Query: 165 AVCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGK 224
+ V+ IG+ F ++LQ G + + DHH F + D K
Sbjct: 260 ITELGAFVAVAGIGNPARFFKTLQSTGITGFDTFSYPDHHKFTSADFRQFDNK------- 312
Query: 225 FNPKPIVVVTEKD 237
+V+TEKD
Sbjct: 313 -----AIVMTEKD 320
>sp|Q8DAV1|LPXK_VIBVU Tetraacyldisaccharide 4'-kinase OS=Vibrio vulnificus (strain CMCP6)
GN=lpxK PE=3 SV=1
Length = 335
Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 31/176 (17%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 121
++ DDG+QH++L+RD+E+V+V+G +GN++L+PLGPLREP L+ D + + D +
Sbjct: 146 IVTDDGLQHYALQRDIEVVVVDGQRRFGNQQLIPLGPLREPTSRLQNVDFIITNGGD--A 203
Query: 122 EQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSAN 181
Q E+ M ++P N+ + +T A+++ + IG
Sbjct: 204 HQG----EIAM------------SLMPDMAV---NLMTGEKVTVNELASLVAFAGIGHPP 244
Query: 182 AFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKD 237
F ++L++LG V F DH F D E I K + + V++TEKD
Sbjct: 245 RFFKTLEQLGADVVVSQGFADHQDF---DPEAIAKLAHQGKN-------VIMTEKD 290
>sp|Q3B2C2|LPXK_PELLD Tetraacyldisaccharide 4'-kinase OS=Pelodictyon luteolum (strain DSM
273) GN=lpxK PE=3 SV=1
Length = 355
Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 103/227 (45%), Gaps = 24/227 (10%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 121
+ILDD QH L RDL+IV++N P+ K+LP G LREP + RAD+AV+ + +
Sbjct: 144 IILDDAFQHRQLARDLDIVVINSREPFAAAKMLPEGRLREPKSGIGRADVAVL--SKITD 201
Query: 122 EQNLKDIELEMRDIKKSLSIFF-TRMVPSYLFEVG-NINSKIPLTAVCNANVLCVSAIGS 179
E IE E+ S+++ TR+V L G S P L + I S
Sbjct: 202 ESKADAIEAEL---TGSVALVARTRVVIGELSPFGPKGRSTAPHPDPAGLKALAFAGIAS 258
Query: 180 ANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKDYD 239
+FV+SL K G V + F DH + + L +E +V TEKD
Sbjct: 259 PASFVESLMKKGVHVVEQRFFRDHEPYTLNNF------LPLVEEARRKGLTLVTTEKDRY 312
Query: 240 R---DPEILMHLEAYKVLVLCSKLQIIPCRGCTEDSFKL--LLKELV 281
R +P +L E V C L I G T + KL +LK +V
Sbjct: 313 RLEGEPGLLEKTEG----VGCCCLNI--ATGFTRGAEKLQEMLKAVV 353
>sp|Q7MJ08|LPXK_VIBVY Tetraacyldisaccharide 4'-kinase OS=Vibrio vulnificus (strain YJ016)
GN=lpxK PE=3 SV=1
Length = 335
Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 31/176 (17%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 121
++ DDG+QH++L+RD+E+V+V+G +GN++L+PLGPLREP L+ D + + D +
Sbjct: 146 IVTDDGLQHYALQRDIEVVVVDGQRRFGNQQLIPLGPLREPTSRLQNVDFIITNGGD--A 203
Query: 122 EQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSAN 181
Q + L M D+ +L K+ + + A+++ + IG
Sbjct: 204 HQGEIAMSL-MPDMAVNLM----------------TGEKVAVNEL--ASLVAFAGIGHPP 244
Query: 182 AFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKD 237
F ++L++LG V F DH F D E I K + + V++TEKD
Sbjct: 245 RFFKTLEQLGADVVVSQGFADHQDF---DPEAIAKLAHQGKN-------VIMTEKD 290
>sp|A1WWF8|LPXK_HALHL Tetraacyldisaccharide 4'-kinase OS=Halorhodospira halophila (strain
DSM 244 / SL1) GN=lpxK PE=3 SV=1
Length = 327
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 35/176 (19%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 121
V+ DDG+QH+ +RRD EIV+++ GNR+LLP GPLREP+ L DI V + D +
Sbjct: 143 VVSDDGLQHYRMRRDAEIVVLDAHRRLGNRRLLPAGPLREPIGRLAGVDIVAV-NGDAVP 201
Query: 122 EQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSAN 181
E + +F + P V P V+ IG
Sbjct: 202 EGD---------------CVF--HLQPGAPRAVDGSQRPWP-----GGEAHAVAGIGHPE 239
Query: 182 AFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKD 237
F SLQ++G R F DHH++ ++D+ ++ +++TEKD
Sbjct: 240 RFFASLQEVGIGVAERHVFPDHHAYSSQDLSFADER------------PIIMTEKD 283
>sp|A5F728|LPXK_VIBC3 Tetraacyldisaccharide 4'-kinase OS=Vibrio cholerae serotype O1
(strain ATCC 39541 / Ogawa 395 / O395) GN=lpxK PE=3 SV=2
Length = 335
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 90/179 (50%), Gaps = 31/179 (17%)
Query: 59 IGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHAD 118
+ ++ DDG+QH++L+RD+EI +V+G+ +GN++L+PLGPLREP+ L D + +
Sbjct: 143 VNVIVTDDGLQHYALQRDIEIAVVDGVRRFGNQELIPLGPLREPVSRLDEVDFIITNGG- 201
Query: 119 LISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIG 178
+++ N + L+ D + + G + LT +C ++ IG
Sbjct: 202 -VAKANEIAMRLQPTD--------------AVNLKTGERCAVSKLTRLC-----AMAGIG 241
Query: 179 SANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKD 237
+ F +L++L V+ F DH +F A + + ++ + L ++TEKD
Sbjct: 242 HPSRFFNTLRELNADLVHCQGFADHQAFDAAQLNQLAQQGDHL----------IMTEKD 290
>sp|A0LF44|LPXK_SYNFM Tetraacyldisaccharide 4'-kinase OS=Syntrophobacter fumaroxidans
(strain DSM 10017 / MPOB) GN=lpxK PE=3 SV=1
Length = 381
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 8/192 (4%)
Query: 54 LKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAV 113
++S + VILDDG QH +L RDL++V+++ P+GN LPLGPLREP L RA V
Sbjct: 162 IESSRADLVILDDGFQHHALERDLDLVLLDASNPFGNGFTLPLGPLREPKAHLARAHAIV 221
Query: 114 VHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLC 173
+ A + +++ ++ +F + + F G + +PL ++ +
Sbjct: 222 LTRA--VEPESVARTRAQLDKAFPDKPVFAAQHILRG-FHAGLGGAVVPLRSMVARPAVA 278
Query: 174 VSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVV 233
+ I +F L+ L F DHH ARD + + +++
Sbjct: 279 FAGIADPKSFFSLLEALEIDLRMAFAFPDHHRPTARDTAALFDAVRACSAD-----LLIT 333
Query: 234 TEKDYDRDPEIL 245
T+KD R P L
Sbjct: 334 TQKDAVRLPGFL 345
>sp|Q0AS12|LPXK_MARMM Tetraacyldisaccharide 4'-kinase OS=Maricaulis maris (strain MCS10)
GN=lpxK PE=3 SV=1
Length = 341
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 26/200 (13%)
Query: 56 SGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPL-MALKRADIAVV 114
+G + V++DDG Q+ L +D IV+V+GL WG ++P GPLREP+ L RAD +V
Sbjct: 137 AGGVDLVLMDDGHQNPDLAKDCSIVVVDGLTGWGPGTIVPAGPLREPVATGLARADAVIV 196
Query: 115 HHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCV 174
D +E + + L S+ +F + PL ++
Sbjct: 197 MMPDAATEPDWTGLGLS----DLSIPVFHAWLE--------------PLAPPPAGKLVAF 238
Query: 175 SAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVT 234
+ IG F +L+ G + DHH+F A D+ + + + + T
Sbjct: 239 AGIGRPEKFFDALRAAGGDIGEVAVYGDHHAFNAGDLRHLDALAAAHDAQL------ITT 292
Query: 235 EKDYDRDP-EILMHLEAYKV 253
EKD+ R P +I + A+ V
Sbjct: 293 EKDWVRLPVDIQARVTAWPV 312
>sp|B5ETK5|LPXK_VIBFM Tetraacyldisaccharide 4'-kinase OS=Vibrio fischeri (strain MJ11)
GN=lpxK PE=3 SV=1
Length = 328
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 31/184 (16%)
Query: 54 LKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAV 113
L+ + +I DDG+QH++L+RD+E ++++G +GN+ +PLGPLRE + L D +
Sbjct: 138 LEQQGVDFIITDDGLQHYALQRDIEFIVIDGKRRFGNQHYIPLGPLREGVERLSSVDFLI 197
Query: 114 VHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLC 173
+ + ++N E+ M R+ PS E N+ + + +N++
Sbjct: 198 CNGGE--PQEN----EVSM------------RLQPS---EAINLVTGERRSVSSLSNLVA 236
Query: 174 VSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVV 233
+ IG F ++L +L V+ F DH +F+ +IE + + E+L ++
Sbjct: 237 FAGIGHPPRFFETLNQLKANVVHTQGFEDHKAFEPTEIEQLMQYGEQL----------IM 286
Query: 234 TEKD 237
TEKD
Sbjct: 287 TEKD 290
>sp|Q9KQX0|LPXK_VIBCH Tetraacyldisaccharide 4'-kinase OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=lpxK PE=3
SV=1
Length = 336
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 89/179 (49%), Gaps = 31/179 (17%)
Query: 59 IGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHAD 118
+ ++ DDG+QH++L+RD+EI +V+G+ +GN++L+PLGPLREP+ L D + +
Sbjct: 144 VNVIVTDDGLQHYALQRDIEIAVVDGVRRFGNQELIPLGPLREPVSRLDEVDFIITNGG- 202
Query: 119 LISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIG 178
+++ N + L+ D + + G + LT +C ++ IG
Sbjct: 203 -VAKANEIAMRLQPTD--------------AVNLKTGERCAVSKLTRLC-----AMAGIG 242
Query: 179 SANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKD 237
+ F +L++L V+ F DH +F A + + ++ L ++TEKD
Sbjct: 243 HPSRFFNTLRELNADLVHCQGFADHQAFDAAQLNQLAQQGAHL----------IMTEKD 291
>sp|Q31H20|LPXK_THICR Tetraacyldisaccharide 4'-kinase OS=Thiomicrospira crunogena (strain
XCL-2) GN=lpxK PE=3 SV=1
Length = 335
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 26/176 (14%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 121
+I DDG+QH+ + RD+EIVM++ GN LP GPLRE L D V + D
Sbjct: 146 IISDDGLQHYKMARDIEIVMMDSERLLGNEYCLPAGPLRESKRRLGLVDFVVWNGGD--- 202
Query: 122 EQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSAN 181
D+ E I K +VP + V N +P+++ + ++ IG+
Sbjct: 203 ---ASDLASETSTIMK--------LVPQHFRSVANPKMILPISSFKHEKTNAMAGIGNPQ 251
Query: 182 AFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKD 237
F +L +LG + F DH +FQ+ D + + + KP+ ++TEKD
Sbjct: 252 RFFNTLSELG-IDADVTPFADHKAFQSSDFDTFE----------STKPL-LMTEKD 295
>sp|Q6LPK7|LPXK_PHOPR Tetraacyldisaccharide 4'-kinase OS=Photobacterium profundum GN=lpxK
PE=3 SV=1
Length = 344
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 35/181 (19%)
Query: 59 IGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHAD 118
+ +I DDG+QH++L RD+E V+++G +GN++LLPLGPLRE L D + +
Sbjct: 152 VDVIITDDGLQHYALARDIEFVVIDGQRRFGNQQLLPLGPLRETCDRLADVDFLICNGGK 211
Query: 119 LISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCN--ANVLCVSA 176
+++N + L+ PS L IN K N N++ ++
Sbjct: 212 --AQKNEAPMHLQ----------------PSAL-----INVKTGERCSINELENIVAMAG 248
Query: 177 IGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEK 236
IG F ++L++LG V+ F DH +F +++ + ++ + L V+TEK
Sbjct: 249 IGHPPRFFKTLEELGVTPVHCQPFTDHQAFSETELKHLAQQGQHL----------VMTEK 298
Query: 237 D 237
D
Sbjct: 299 D 299
>sp|Q60B49|LPXK_METCA Tetraacyldisaccharide 4'-kinase OS=Methylococcus capsulatus (strain
ATCC 33009 / NCIMB 11132 / Bath) GN=lpxK PE=3 SV=1
Length = 336
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 31/176 (17%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 121
V+ DDG+QH++L RD+EI +V+G+ +GN +LLP GPLREP+ L D V + +
Sbjct: 149 VVSDDGLQHYALPRDVEIAVVDGVRRYGNGRLLPAGPLREPVERLASVDFVVCNGGEPGP 208
Query: 122 EQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSAN 181
+++ + LE R + + PL A ++ ++ IG
Sbjct: 209 GESV--MTLEGRTAVRLAD-----------------GERRPLAAFAGQRIVAMAGIGHPA 249
Query: 182 AFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKD 237
F L LG + + + DHH++ D + + V++TEKD
Sbjct: 250 RFFSHLAALG-LNFEPVAWPDHHAYSPDDFRSVPEDTP-----------VLITEKD 293
>sp|B0TWX8|LPXK_FRAP2 Tetraacyldisaccharide 4'-kinase OS=Francisella philomiragia subsp.
philomiragia (strain ATCC 25017) GN=lpxK PE=3 SV=1
Length = 322
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 26/179 (14%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRAD-IAVVHHADLI 120
+I DDG+QH+ L R E+V+V+ +GN LP GPLREP+ LK D I + + D
Sbjct: 145 IISDDGLQHYKLARTKEVVVVDASRMFGNGLCLPAGPLREPVERLKSVDQIIAIGNLD-- 202
Query: 121 SEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSK--IPLTAVCNANVLCVSAIG 178
QN ++ +I ++ I T+ V N+ +K I + + ++ V+ IG
Sbjct: 203 -NQNYSELLNYNSNIVRA-KIKATKFV--------NLVTKQSILIDSFYGKSIDAVAGIG 252
Query: 179 SANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKD 237
+ + F SL +LG + F DHH + +D E F+P+ IV++T KD
Sbjct: 253 NPDKFFSSLDELGVNIYHEHIFRDHHKYTPKDFE-----------HFDPEQIVIMTYKD 300
>sp|Q2SIN4|LPXK_HAHCH Tetraacyldisaccharide 4'-kinase OS=Hahella chejuensis (strain KCTC
2396) GN=lpxK PE=3 SV=1
Length = 338
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 33/177 (18%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 121
VI DDG+QH +L RD+E+V+V+ WGN LP GPLREP+ L+ D+ V ++ +
Sbjct: 151 VISDDGLQHLALPRDMEVVVVDAQRGWGNGLCLPAGPLREPVRRLQSVDLVV---SNGLH 207
Query: 122 EQNLKDIELEMRDIK-KSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSA 180
Q D +++R + K +S G+ + A A+ V+AIG+
Sbjct: 208 AQVNADYTMQLRPGRWKKVS--------------GDEERGVNYFAGYTAH--AVAAIGNP 251
Query: 181 NAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKD 237
F +L L S+ F DH+S+ +DIE FN V++TEKD
Sbjct: 252 GRFFATLADLDVASIQHA-FPDHYSYAQKDIE------------FNDDLPVLMTEKD 295
>sp|B3QLP5|LPXK_CHLP8 Tetraacyldisaccharide 4'-kinase OS=Chlorobaculum parvum (strain
NCIB 8327) GN=lpxK PE=3 SV=1
Length = 361
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 13/181 (7%)
Query: 60 GAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADL 119
G ++LDD QH + RDL+IV+VN P +LP G LREPL L RAD+ ++ + +
Sbjct: 142 GVIVLDDAFQHRKIARDLDIVVVNAGTPQELDAMLPAGRLREPLPGLSRADLIIL--SKI 199
Query: 120 ISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGS 179
+ + ++R+ K + +++ P L +V + AV L + IG+
Sbjct: 200 TDDAKAAPLLQKLRETGK--PVLRSKIKPGKLVKVDGSENGATEPAV---KALAFAGIGA 254
Query: 180 ANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKDYD 239
F+ SL+K G F DH + I I ++ + E F P V TEKD+
Sbjct: 255 PEGFLHSLEKAGITVKATKFFRDHEPYTEAAIRSIIEESKRQE--FVP----VTTEKDWF 308
Query: 240 R 240
R
Sbjct: 309 R 309
>sp|Q7NSS4|LPXK_CHRVO Tetraacyldisaccharide 4'-kinase OS=Chromobacterium violaceum
(strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 /
NCIMB 9131 / NCTC 9757) GN=lpxK PE=3 SV=1
Length = 339
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 121
++ DDG+QH+ L RDLEIV+++G G+ +LLP GPLREP L D VV
Sbjct: 145 ILSDDGLQHYRLARDLEIVVLDGSRGLGSGRLLPNGPLREPPSRLAAVDAVVV------- 197
Query: 122 EQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSAN 181
N + +L + D L F + P + + + V ++ IG
Sbjct: 198 --NGEGAQLPLPD---GLPRFAMTLRPGACHALDDASRARDAAGFAGRKVAALAGIGHPE 252
Query: 182 AFVQSLQKLGPCSVNRLDFNDHHSFQARDI 211
F +L G RL F DHH+F DI
Sbjct: 253 RFFDTLAGQGIAVEQRLSFPDHHAFVPGDI 282
>sp|A1K5I2|LPXK_AZOSB Tetraacyldisaccharide 4'-kinase OS=Azoarcus sp. (strain BH72)
GN=lpxK PE=3 SV=1
Length = 341
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 74/152 (48%), Gaps = 14/152 (9%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 121
++ DDGMQH+ L RDLE+ +V+ GNR LLP GPLREP+ L R D+ V+ H D
Sbjct: 152 IVSDDGMQHYRLARDLELAVVDPAT-LGNRWLLPAGPLREPVGRLDRVDL-VIRHGD--- 206
Query: 122 EQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSAN 181
+ EL R +++ + R+V V + + +A V V+ IG
Sbjct: 207 -----EGELPPRLGARAVPM---RLVGDGFRGVADPARRCEASAFRGRRVHAVAGIGRPQ 258
Query: 182 AFVQSLQKLGPCSVNRLDFNDHHSFQARDIEM 213
F L +G V F DHH F A D++
Sbjct: 259 RFFDQLAAMG-LDVVPHPFPDHHRFVAADLDF 289
>sp|A6L0S5|LPXK_BACV8 Tetraacyldisaccharide 4'-kinase OS=Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154) GN=lpxK PE=3 SV=1
Length = 366
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 33 VDPRDCASSQKNCINPKVGSHLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRK 92
VD C ++ C SH+ G +ILDD QH ++ + I++V+
Sbjct: 118 VDRDRCHGIEQLC-----NSHIAPG-TEVIILDDAFQHRYVKPGINILLVDYHRLICEDT 171
Query: 93 LLPLGPLREPLMALKRADIAVVHHADL-ISEQNLKDIELEMRDIKKSLSIFFTRMVPSYL 151
LLP G +REP RA I +V I+ +L+ + +M ++ ++FT + L
Sbjct: 172 LLPAGRMREPENGKSRAHIVIVTKCPKDITPMDLRVLSKQM-ELYPYQQLYFTTLTYGKL 230
Query: 152 FEVGNINSKIPLTAV-CNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARD 210
+ + + L + + ++L V+ I S +Q L + L F+DHH F ARD
Sbjct: 231 HPLFTAGNAVSLKEIEKDKHILLVTGIASPAKLIQDLSPYNE-HIESLAFSDHHDFTARD 289
Query: 211 IEMIKKKLEEL-EGKFNPKPIVVVTEKD 237
+E+IKK+ +L EG K +++ TEKD
Sbjct: 290 MELIKKRFMKLPEG----KRMIITTEKD 313
>sp|Q1QBV9|LPXK_PSYCK Tetraacyldisaccharide 4'-kinase OS=Psychrobacter cryohalolentis
(strain K5) GN=lpxK PE=3 SV=1
Length = 372
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 34/224 (15%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 121
+I DDG+QH++L+RD+E V+V+ +GN++LLP G LREP+ LK A++ H D S
Sbjct: 149 IIADDGLQHYALQRDIEWVVVDAARGFGNKQLLPTGFLREPISRLKDANVIYHHKPDASS 208
Query: 122 EQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVC------NANVLCVS 175
N D + + L++ + P L + + N++I AV + V VS
Sbjct: 209 IYNKSD---HNTLLTEHLTM---HLQPDDLELLWSSNNQIDNLAVVAMAPEKGSQVHAVS 262
Query: 176 AIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTE 235
IG F +L LG V + DH+ F L+EL ++ PI +VT
Sbjct: 263 GIGYPQRFFDTLNALG-FEVIPHPYPDHYDF----------SLDELL-QYADHPI-IVTS 309
Query: 236 KDYDRDPEILMHL-------EAYKVLVLCSKLQIIPCRGCTEDS 272
KD + ++M + YK LV S+L ++P DS
Sbjct: 310 KDAVKIRALIMQAIINQALSDEYKELV--SRLWVLPVTAVLSDS 351
>sp|Q3SPI3|LPXK_NITWN Tetraacyldisaccharide 4'-kinase OS=Nitrobacter winogradskyi (strain
Nb-255 / ATCC 25391) GN=lpxK PE=3 SV=1
Length = 337
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 23/180 (12%)
Query: 62 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMA-LKRADIAVVHHADLI 120
+++DDG Q+ +L RD+ +++++G GNR++ P GPLR PL L R D V+
Sbjct: 136 ILMDDGFQNPTLARDISLIVIDGDRGLGNRRIFPAGPLRAPLPPQLARTDALVIVGPGSA 195
Query: 121 SEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSA 180
++ IE + + R+VP + + A+ VL + IG
Sbjct: 196 ADDIAASIE------ARGGPVLRARVVP----------DEASVAALRGRRVLAFAGIGDP 239
Query: 181 NAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKDYDR 240
+ F + L+ G F DHH F RD+ ++ E+ +G +V TEKD R
Sbjct: 240 SRFFRGLRACGVDVAAERAFADHHPFSQRDVAALQSAAEK-DGL-----TLVTTEKDLAR 293
>sp|Q492T0|LPXK_BLOPB Tetraacyldisaccharide 4'-kinase OS=Blochmannia pennsylvanicus
(strain BPEN) GN=lpxK PE=3 SV=1
Length = 337
Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 41/201 (20%)
Query: 45 CINPK----VGSHLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLR 100
++PK V + L+ ++ +I DDG+QH++L RD+E V+VN ++ +GN LP GP+R
Sbjct: 122 AVSPKRADAVAALLRKQELDIIISDDGLQHYALFRDIEWVIVNSVLRFGNGCWLPAGPMR 181
Query: 101 EPLMALKRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNIN-- 158
E + L A++ + SE ++ E+ M+ LF + +N
Sbjct: 182 ERINRLHTVQ-AIIANG---SEVGIQSGEVLMQ-----------------LFPIAVVNIL 220
Query: 159 --SKIPLTAVCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKK 216
+ PL + NV+ ++ IG F +L+ G + + F+DHH + + + + K
Sbjct: 221 TGERKPLYFL--NNVVAIAGIGYPTQFFDTLRSYGIIPIRSISFSDHHVYSEKMLTSLTK 278
Query: 217 KLEELEGKFNPKPIVVVTEKD 237
K E I+++TEKD
Sbjct: 279 KDE----------ILLMTEKD 289
>sp|Q5ZUI0|LPXK_LEGPH Tetraacyldisaccharide 4'-kinase OS=Legionella pneumophila subsp.
pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM
7513) GN=lpxK PE=3 SV=1
Length = 323
Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 94/228 (41%), Gaps = 48/228 (21%)
Query: 47 NPKVGSHLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMAL 106
N V L + +I DDG+QH+ + R +EIV+++G+ GN LP GPLREP L
Sbjct: 129 NEAVRYLLDKHSVEIIISDDGLQHYKMGRSIEIVVIDGMRKLGNGFCLPAGPLREPDSRL 188
Query: 107 KRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAV 166
K+ D +V+ Q + M I K++ T+ EV N +
Sbjct: 189 KQVDFVIVN-------QGAAEGTYSMELIPKNIVRLSTQE------EVSN--------DL 227
Query: 167 CNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFN 226
+ V V+ IG+ F +L +LG N + DHH F+ D+ I
Sbjct: 228 FTSEVAAVAGIGNPQRFYSTLSQLG-IKFNPYSYPDHHQFKPHDLNDIDLP--------- 277
Query: 227 PKPIVVVTEKDYDRDPEILMHLEAYKVLVLCS-KLQIIPCRGCTEDSF 273
V++TEKD A K S KL +P DSF
Sbjct: 278 ----VIMTEKD------------AVKCYSFSSDKLYYLPVEAKLNDSF 309
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,847,370
Number of Sequences: 539616
Number of extensions: 4247753
Number of successful extensions: 12203
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 11595
Number of HSP's gapped (non-prelim): 473
length of query: 284
length of database: 191,569,459
effective HSP length: 116
effective length of query: 168
effective length of database: 128,974,003
effective search space: 21667632504
effective search space used: 21667632504
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)