Your job contains 1 sequence.
>023316
MAKIIHEATENMTQLCRRVVHVNIRRSLFDRVSIFRRFFRFIWERILVCSIGKQPAVRYQ
KLTRRSSSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKY
VGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFD
LTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKA
TLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023316
(284 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2160125 - symbol:SGP1 species:3702 "Arabidopsi... 876 1.1e-87 1
TAIR|locus:2093019 - symbol:SGP2 species:3702 "Arabidopsi... 732 1.2e-75 2
ASPGD|ASPL0000066888 - symbol:spgA species:162425 "Emeric... 512 4.1e-49 1
POMBASE|SPAC1565.06c - symbol:spg1 "GTPase Spg1" species:... 500 7.7e-48 1
DICTYBASE|DDB_G0291269 - symbol:spg1 "small GTPase" speci... 496 2.0e-47 1
SGD|S000004529 - symbol:TEM1 "GTP-binding protein of the ... 374 1.7e-34 1
FB|FBgn0086913 - symbol:Rab26 "Rab26" species:7227 "Droso... 200 1.6e-15 1
SGD|S000001889 - symbol:SEC4 "Rab family GTPase essential... 192 3.3e-15 1
FB|FBgn0015793 - symbol:Rab19 "Rab19" species:7227 "Droso... 186 1.4e-14 1
DICTYBASE|DDB_G0291738 - symbol:rabG1 "Rab GTPase" specie... 185 1.8e-14 1
ASPGD|ASPL0000015781 - symbol:srgH species:162425 "Emeric... 183 3.0e-14 1
DICTYBASE|DDB_G0290783 - symbol:rabG2 "Rab GTPase" specie... 182 3.8e-14 1
FB|FBgn0052670 - symbol:Rab9Fb "Rab at 9Fb" species:7227 ... 181 4.9e-14 1
UNIPROTKB|F1MHP4 - symbol:RAB22A "Uncharacterized protein... 180 6.2e-14 1
UNIPROTKB|Q0IIG7 - symbol:RAB5A "Ras-related protein Rab-... 180 6.2e-14 1
UNIPROTKB|F1PGI1 - symbol:RAB21 "Ras-related protein Rab-... 180 6.2e-14 1
UNIPROTKB|P55745 - symbol:RAB21 "Ras-related protein Rab-... 180 6.2e-14 1
UNIPROTKB|Q9UL25 - symbol:RAB21 "Ras-related protein Rab-... 180 6.2e-14 1
UNIPROTKB|A5GHL0 - symbol:RAB22A "Uncharacterized protein... 180 6.2e-14 1
UNIPROTKB|F1SH25 - symbol:RAB21 "Uncharacterized protein"... 180 6.2e-14 1
MGI|MGI:105072 - symbol:Rab22a "RAB22A, member RAS oncoge... 180 6.2e-14 1
UNIPROTKB|Q17R06 - symbol:RAB21 "Ras-related protein Rab-... 179 7.9e-14 1
UNIPROTKB|Q9UL26 - symbol:RAB22A "Ras-related protein Rab... 179 7.9e-14 1
UNIPROTKB|Q06AU6 - symbol:RAB5A "Ras-related protein Rab-... 179 7.9e-14 1
MGI|MGI:894308 - symbol:Rab21 "RAB21, member RAS oncogene... 179 7.9e-14 1
RGD|1303150 - symbol:Rab21 "RAB21, member RAS oncogene fa... 179 7.9e-14 1
UNIPROTKB|O88565 - symbol:Rab5a "Protein Rab5a" species:1... 179 7.9e-14 1
WB|WBGene00004279 - symbol:rab-21 species:6239 "Caenorhab... 179 7.9e-14 1
UNIPROTKB|F1NC27 - symbol:RAB21 "Uncharacterized protein"... 178 1.0e-13 1
UNIPROTKB|D4A0G7 - symbol:LOC100364984 "RCG35079, isoform... 178 1.0e-13 1
UNIPROTKB|Q5ZLB8 - symbol:RAB22A "Uncharacterized protein... 177 1.3e-13 1
TAIR|locus:2042321 - symbol:RAB6A species:3702 "Arabidops... 177 1.3e-13 1
ZFIN|ZDB-GENE-031118-30 - symbol:rab5c "RAB5C, member RAS... 177 1.3e-13 1
UNIPROTKB|P18066 - symbol:RAB5A "Ras-related protein Rab-... 176 1.6e-13 1
UNIPROTKB|P20339 - symbol:RAB5A "Ras-related protein Rab-... 176 1.6e-13 1
UNIPROTKB|P61271 - symbol:RAB5A "Ras-related protein Rab-... 176 1.6e-13 1
MGI|MGI:1929945 - symbol:Rab37 "RAB37, member of RAS onco... 176 1.6e-13 1
MGI|MGI:105926 - symbol:Rab5a "RAB5A, member RAS oncogene... 176 1.6e-13 1
RGD|2319287 - symbol:LOC100361891 "RAB5A, member RAS onco... 176 1.6e-13 1
UNIPROTKB|Q5ZIP7 - symbol:RAB5A "Uncharacterized protein"... 175 2.1e-13 1
UNIPROTKB|F1MBF6 - symbol:RAB6A "Uncharacterized protein"... 175 2.1e-13 1
UNIPROTKB|J9NYJ8 - symbol:RAB6A "Uncharacterized protein"... 175 2.1e-13 1
UNIPROTKB|F1SUT0 - symbol:RAB6A "Uncharacterized protein"... 175 2.1e-13 1
TAIR|locus:2171790 - symbol:RABA4a "RAB GTPase homolog A4... 175 2.1e-13 1
ZFIN|ZDB-GENE-060929-1062 - symbol:zgc:154045 "zgc:154045... 175 2.1e-13 1
UNIPROTKB|F1MPP1 - symbol:LOC781001 "Uncharacterized prot... 174 2.7e-13 1
UNIPROTKB|E2RHA1 - symbol:RAB37 "Uncharacterized protein"... 174 2.7e-13 1
WB|WBGene00004268 - symbol:rab-5 species:6239 "Caenorhabd... 174 2.7e-13 1
UNIPROTKB|P91857 - symbol:rab-5 "Protein RAB-5" species:6... 174 2.7e-13 1
ZFIN|ZDB-GENE-041114-161 - symbol:rab22a "RAB22A, member ... 174 2.7e-13 1
DICTYBASE|DDB_G0277101 - symbol:rab11C "Rab GTPase" speci... 173 3.4e-13 1
UNIPROTKB|Q1KME6 - symbol:RAB6A "Ras-related protein Rab-... 173 3.4e-13 1
UNIPROTKB|P51154 - symbol:RAB22A "Ras-related protein Rab... 173 3.4e-13 1
RGD|1307095 - symbol:Rab5c "RAB5C, member RAS oncogene fa... 173 3.4e-13 1
ZFIN|ZDB-GENE-030131-139 - symbol:rab5aa "RAB5A, member R... 173 3.4e-13 1
FB|FBgn0031090 - symbol:Rab35 "Rab35" species:7227 "Droso... 172 4.4e-13 1
UNIPROTKB|E1C6J7 - symbol:RAB17 "Uncharacterized protein"... 172 4.4e-13 1
UNIPROTKB|Q58DS9 - symbol:RAB5C "Ras-related protein Rab-... 172 4.4e-13 1
UNIPROTKB|P51148 - symbol:RAB5C "Ras-related protein Rab-... 172 4.4e-13 1
UNIPROTKB|F2Z560 - symbol:RAB5C "Uncharacterized protein"... 172 4.4e-13 1
UNIPROTKB|Q5R7L7 - symbol:RAB5C "Ras-related protein Rab-... 172 4.4e-13 1
TAIR|locus:2831859 - symbol:RABC2A "RAB GTPase homolog C2... 172 4.4e-13 1
ZFIN|ZDB-GENE-040122-3 - symbol:rab5ab "RAB5A, member RAS... 172 4.4e-13 1
ZFIN|ZDB-GENE-040718-428 - symbol:rab3db "RAB3D, member R... 172 4.4e-13 1
GENEDB_PFALCIPARUM|PF08_0110 - symbol:rab18 "PfRab18, GTP... 171 5.7e-13 1
UNIPROTKB|F1NST3 - symbol:RAB5C "Ras-related protein Rab-... 171 5.7e-13 1
UNIPROTKB|Q7K6B0 - symbol:rab18 "PfRab18, GTPase" species... 171 5.7e-13 1
TAIR|locus:2024276 - symbol:RAB11c "RAB GTPase 11C" speci... 171 5.7e-13 1
TAIR|locus:2153202 - symbol:RHA1 "RAB homolog 1" species:... 171 5.7e-13 1
WB|WBGene00004285 - symbol:rab-37 species:6239 "Caenorhab... 171 5.7e-13 1
UNIPROTKB|Q3MHP2 - symbol:RAB11B "Ras-related protein Rab... 170 7.5e-13 1
UNIPROTKB|J9JHN1 - symbol:RAB11B "Uncharacterized protein... 170 7.5e-13 1
UNIPROTKB|P51147 - symbol:RAB5C "Ras-related protein Rab-... 170 7.5e-13 1
UNIPROTKB|P20340 - symbol:RAB6A "Ras-related protein Rab-... 170 7.5e-13 1
UNIPROTKB|Q15907 - symbol:RAB11B "Ras-related protein Rab... 170 7.5e-13 1
UNIPROTKB|F2Z5J9 - symbol:RAB11B "Uncharacterized protein... 170 7.5e-13 1
UNIPROTKB|Q5RAV6 - symbol:RAB6A "Ras-related protein Rab-... 170 7.5e-13 1
MGI|MGI:99425 - symbol:Rab11b "RAB11B, member RAS oncogen... 170 7.5e-13 1
MGI|MGI:105306 - symbol:Rab5c "RAB5C, member RAS oncogene... 170 7.5e-13 1
MGI|MGI:894313 - symbol:Rab6a "RAB6A, member RAS oncogene... 170 7.5e-13 1
RGD|619737 - symbol:Rab6a "RAB6A, member RAS oncogene fam... 170 7.5e-13 1
RGD|68369 - symbol:Rab11b "RAB11B, member RAS oncogene fa... 170 7.5e-13 1
TAIR|locus:2015576 - symbol:RABA1b "RAB GTPase homolog A1... 170 7.5e-13 1
TAIR|locus:2123010 - symbol:ARA7 species:3702 "Arabidopsi... 170 7.5e-13 1
ZFIN|ZDB-GENE-040718-293 - symbol:rab11bb "RAB11B, member... 170 7.5e-13 1
UNIPROTKB|Q5F3R8 - symbol:RAB11B "Uncharacterized protein... 169 9.8e-13 1
UNIPROTKB|Q98932 - symbol:RAB5C "Ras-related protein Rab-... 169 9.8e-13 1
UNIPROTKB|A8MTC6 - symbol:RAB37 "RAB37, member RAS oncoge... 169 9.8e-13 1
UNIPROTKB|Q96AX2 - symbol:RAB37 "Ras-related protein Rab-... 169 9.8e-13 1
UNIPROTKB|F2Z570 - symbol:RAB37 "Uncharacterized protein"... 169 9.8e-13 1
UNIPROTKB|E1C0Q9 - symbol:RAB26 "Uncharacterized protein"... 177 1.3e-12 1
DICTYBASE|DDB_G0276007 - symbol:DDB_G0276007 "Rab GTPase"... 168 1.3e-12 1
UNIPROTKB|A8MSP2 - symbol:RAB37 "cDNA FLJ45130 fis, clone... 168 1.3e-12 1
UNIPROTKB|B7Z3L0 - symbol:RAB37 "cDNA FLJ61124, highly si... 168 1.3e-12 1
TAIR|locus:2169053 - symbol:RABA5a "RAB GTPase homolog A5... 168 1.3e-12 1
TAIR|locus:2168469 - symbol:RABA2D "RAB GTPase homolog A2... 168 1.3e-12 1
UNIPROTKB|A6QR46 - symbol:RAB6B "Ras-related protein Rab-... 167 1.7e-12 1
UNIPROTKB|Q9NRW1 - symbol:RAB6B "Ras-related protein Rab-... 167 1.7e-12 1
MGI|MGI:107283 - symbol:Rab6b "RAB6B, member RAS oncogene... 167 1.7e-12 1
ZFIN|ZDB-GENE-040426-2849 - symbol:rab6a "RAB6A, member R... 167 1.7e-12 1
WARNING: Descriptions of 907 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2160125 [details] [associations]
symbol:SGP1 species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR013684 Pfam:PF08477 PRINTS:PR00449 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP002688 GO:GO:0007264 GO:GO:0005622
eggNOG:COG1100 EMBL:AB005232 KO:K07976 HOGENOM:HOG000216335
InterPro:IPR017231 PIRSF:PIRSF037527 EMBL:AJ238846 IPI:IPI00529549
RefSeq:NP_200295.1 UniGene:At.487 ProteinModelPortal:Q9SUJ6
SMR:Q9SUJ6 EnsemblPlants:AT5G54840.1 GeneID:835574
KEGG:ath:AT5G54840 TAIR:At5g54840 InParanoid:Q9SUJ6 OMA:GWYSQAR
PhylomeDB:Q9SUJ6 ProtClustDB:CLSN2916467 Genevestigator:Q9SUJ6
Uniprot:Q9SUJ6
Length = 288
Score = 876 (313.4 bits), Expect = 1.1e-87, P = 1.1e-87
Identities = 175/288 (60%), Positives = 211/288 (73%)
Query: 1 MAKIIHEATENMTQLCRRVVHVNIRRSLXXXXXXXXXXXXXXXXXXLVCSIGKQPAVRYQ 60
MA+ +HE +T CR++VHVN + + + CS + + Y+
Sbjct: 1 MAEKVHEIAGKITPFCRKIVHVNRKWRIIERVSIFGDFFRFLWRKIVSCSSIIEKPILYR 60
Query: 61 KLTRRSSSESSPAPDTMEAGLVELS---RTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV 117
++ + SS + D + E + R F S +DSDLVSLKISLLGDCQ GKT+FV
Sbjct: 61 RIVHKISSTAGDIFDGDDDTTTEPTVSGRRFGSS--SDSDLVSLKISLLGDCQTGKTTFV 118
Query: 118 VKYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS-RSFDHVPIACKDAVAIL 176
VKYVG+E + L+M GLNL++KT VQG I+FSIWDVGGD RS DH+PIACKDAVAIL
Sbjct: 119 VKYVGDENQSFLEMTGLNLMDKTFYVQGVTISFSIWDVGGDEKRSKDHIPIACKDAVAIL 178
Query: 177 FMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAK 236
FMFDLTSR TLNS+ GWYS+ARKWN+TAIPILIGTKFDDFVRLPP+LQWTI TQARAYAK
Sbjct: 179 FMFDLTSRSTLNSVFGWYSQARKWNKTAIPILIGTKFDDFVRLPPNLQWTIVTQARAYAK 238
Query: 237 AMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 284
M A+LFFSSATHNINVNKIFKFI+A+LFNLPW + RNLT+GEPIID+
Sbjct: 239 VMNASLFFSSATHNINVNKIFKFILARLFNLPWKIDRNLTLGEPIIDY 286
>TAIR|locus:2093019 [details] [associations]
symbol:SGP2 species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0090404 "pollen tube tip"
evidence=IDA] [GO:0015824 "proline transport" evidence=RCA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA]
InterPro:IPR001806 InterPro:IPR013684 Pfam:PF08477 PRINTS:PR00449
GO:GO:0005525 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0007264
GO:GO:0005622 EMBL:AB025634 GO:GO:0090404 KO:K07976
HOGENOM:HOG000216335 OMA:DSQIGKT InterPro:IPR017231
PIRSF:PIRSF037527 EMBL:AJ505743 IPI:IPI00519671 RefSeq:NP_850622.1
UniGene:At.5851 ProteinModelPortal:Q9LSZ4 SMR:Q9LSZ4 PRIDE:Q9LSZ4
EnsemblPlants:AT3G21700.3 GeneID:821724 KEGG:ath:AT3G21700
TAIR:At3g21700 InParanoid:Q9LSZ4 PhylomeDB:Q9LSZ4
ProtClustDB:CLSN2688647 Genevestigator:Q9LSZ4 Uniprot:Q9LSZ4
Length = 292
Score = 732 (262.7 bits), Expect = 1.2e-75, Sum P(2) = 1.2e-75
Identities = 138/194 (71%), Positives = 169/194 (87%)
Query: 94 TDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE---RSLQMAGLNLINKTLMVQGARIAF 150
+DSDLVSLKISLLGD +IGKTSF+ KYVG E+E R L+ G+N +KTL + GARI++
Sbjct: 100 SDSDLVSLKISLLGDPEIGKTSFLAKYVGEEKEVEMRELEK-GINCTDKTLYMGGARISY 158
Query: 151 SIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIG 210
SIW++ G RS D +P+ACKD+VAILFMFDLTSRCTLNS++ WY +ARK NQTAIP+++G
Sbjct: 159 SIWELEGAERSRDQIPVACKDSVAILFMFDLTSRCTLNSVISWYQQARKSNQTAIPVMVG 218
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWT 270
TKFD+F++LP DLQWTIA+QAR YAKA+ ATLFFSSA++NINVNKIFKF+ AKLF+LPWT
Sbjct: 219 TKFDEFIQLPIDLQWTIASQARTYAKALNATLFFSSASYNINVNKIFKFVTAKLFDLPWT 278
Query: 271 VKRNLTIGEPIIDF 284
V+RNLTIGEPIIDF
Sbjct: 279 VERNLTIGEPIIDF 292
Score = 49 (22.3 bits), Expect = 1.2e-75, Sum P(2) = 1.2e-75
Identities = 18/71 (25%), Positives = 29/71 (40%)
Query: 12 MTQLCRRVVHVN-IRRSLXXXXXXXXXXXXXXXXXXLVCSIGKQPAVRYQKLTRR--SSS 68
M Q C ++V +N +R + + C+ GK RY L+R S +
Sbjct: 1 MAQSCLKIVRINNLRNRVNRRILILRRFTRLLWSRIVACTPGKSR--RYLLLSRALPSPT 58
Query: 69 ESSPAPDTMEA 79
S P+P + A
Sbjct: 59 VSRPSPSPIPA 69
>ASPGD|ASPL0000066888 [details] [associations]
symbol:spgA species:162425 "Emericella nidulans"
[GO:0044732 "mitotic spindle pole body" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0031028 "septation initiation
signaling cascade" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 EMBL:BN001304 HOGENOM:HOG000216335 InterPro:IPR017231
PIRSF:PIRSF037527 ProteinModelPortal:C8VD16
EnsemblFungi:CADANIAT00000248 OMA:SDSRAHY Uniprot:C8VD16
Length = 314
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 102/217 (47%), Positives = 140/217 (64%)
Query: 67 SSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQ 125
+ + P P T LS T T + V +K+ ++GD QIGKTS +VKYV G+
Sbjct: 93 TQDPQPQPPTSSRPSSGLSGTQKQPAQTTKNSVVIKVGMVGDAQIGKTSLMVKYVEGSWD 152
Query: 126 ERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRC 185
E +Q G+N + KT+ ++ I FSIWD+GG + +P+ C DAVAILFMFDLT +
Sbjct: 153 EDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKS 212
Query: 186 TLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFS 245
TLNSI WY + R +N+TAIP L+GTK+D FV P + Q I+ QA+ +AKAMKA+L FS
Sbjct: 213 TLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFVNFPREDQEEISIQAKRFAKAMKASLIFS 272
Query: 246 SATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPII 282
S +H+INV KIFK ++AK F+L T+ IGEP++
Sbjct: 273 STSHSINVQKIFKIVLAKAFDLKCTIPEIENIGEPLL 309
>POMBASE|SPAC1565.06c [details] [associations]
symbol:spg1 "GTPase Spg1" species:4896
"Schizosaccharomyces pombe" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IC] [GO:0005816 "spindle pole
body" evidence=IDA] [GO:0031028 "septation initiation signaling
cascade" evidence=IGI] [GO:0033205 "cell cycle cytokinesis"
evidence=IMP] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
InterPro:IPR001806 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
PomBase:SPAC1565.06c GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CU329670
GO:GO:0034613 GO:GO:0007067 GenomeReviews:CU329670_GR GO:GO:0044732
GO:GO:0003924 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0071937
GO:GO:0031028 KO:K07976 EMBL:Y12314 EMBL:AJ001587 PIR:T45541
RefSeq:NP_593285.1 ProteinModelPortal:P87027 IntAct:P87027
STRING:P87027 EnsemblFungi:SPAC1565.06c.1 GeneID:2542761
KEGG:spo:SPAC1565.06c HOGENOM:HOG000216335 OMA:DSQIGKT
OrthoDB:EOG4C5GTN NextBio:20803806 InterPro:IPR017231
PIRSF:PIRSF037527 Uniprot:P87027
Length = 198
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 95/193 (49%), Positives = 134/193 (69%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFS 151
D + V++K+ ++GD IGKTS +V YV G+ E S Q G+N + KT+ ++ I FS
Sbjct: 3 DARKNNVTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFS 62
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGT 211
IWD+GG + +P+ C DAVAILFMFDL+ + TLNSI WY +AR +N+TA+PILIGT
Sbjct: 63 IWDLGGQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAVPILIGT 122
Query: 212 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTV 271
K+D F+ P + Q I QAR YAKAMKA+L F S +H+INV KIFK ++AK+F+L T+
Sbjct: 123 KYDHFMTFPREDQEEITKQARRYAKAMKASLVFCSTSHSINVQKIFKIVLAKVFDLKCTI 182
Query: 272 KRNLTIGEPIIDF 284
+G+PI+++
Sbjct: 183 PEIKNVGDPILEY 195
>DICTYBASE|DDB_G0291269 [details] [associations]
symbol:spg1 "small GTPase" species:44689
"Dictyostelium discoideum" [GO:0005813 "centrosome" evidence=IDA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007096
"regulation of exit from mitosis" evidence=ISS] [GO:0006184 "GTP
catabolic process" evidence=ISS] [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
dictyBase:DDB_G0291269 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005813 GO:GO:0007264 EMBL:AAFI02000177
GenomeReviews:CM000155_GR GO:GO:0003924 GO:GO:0007096
eggNOG:COG1100 KO:K07976 OMA:DSQIGKT InterPro:IPR017231
PIRSF:PIRSF037527 RefSeq:XP_635107.1 ProteinModelPortal:Q54EY3
EnsemblProtists:DDB0230030 GeneID:8628054 KEGG:ddi:DDB_G0291269
InParanoid:Q54EY3 ProtClustDB:CLSZ2429534 Uniprot:Q54EY3
Length = 203
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 95/198 (47%), Positives = 135/198 (68%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGA 146
F+ DT + V +K+ ++GD QIGKTS +VKYV G E +Q G+N + KT+ ++G
Sbjct: 6 FTGSSDTKKNNVVVKVGMVGDSQIGKTSLMVKYVEGTFDEDYIQTLGVNFMEKTISIRGT 65
Query: 147 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP 206
I FSIWD+GG + +P+ C DAVAILFMFDL+ + TLNS+ WY +AR +N+TAIP
Sbjct: 66 EITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIP 125
Query: 207 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 266
LIGTKFD F P + Q I QAR +A AMK+ L F S +H+INV KIFK +++K F+
Sbjct: 126 FLIGTKFDVFATKPIEEQEEITKQARKFASAMKSPLIFCSTSHSINVQKIFKIVISKAFD 185
Query: 267 LPWTVKRNLTIGEPIIDF 284
L T+ + + +GEP++++
Sbjct: 186 LNCTIPKVVGVGEPLLEY 203
>SGD|S000004529 [details] [associations]
symbol:TEM1 "GTP-binding protein of the Ras family involved
in M-phase termination" species:4932 "Saccharomyces cerevisiae"
[GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007096 "regulation of exit from mitosis" evidence=TAS]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR001806
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SGD:S000004529
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0005816
GO:GO:0051301 GO:GO:0007067 GO:GO:0003924 EMBL:BK006946
PROSITE:PS51419 GO:GO:0007096 eggNOG:COG1100 EMBL:Z38114
HOGENOM:HOG000216335 OMA:DSQIGKT OrthoDB:EOG4C5GTN
InterPro:IPR017231 PIRSF:PIRSF037527 EMBL:D38172 EMBL:AY557980
PIR:S48334 RefSeq:NP_013647.1 ProteinModelPortal:P38987 SMR:P38987
DIP:DIP-1691N IntAct:P38987 MINT:MINT-383751 STRING:P38987
PaxDb:P38987 PeptideAtlas:P38987 EnsemblFungi:YML064C GeneID:854938
KEGG:sce:YML064C CYGD:YML064c KO:K06682 NextBio:977983
Genevestigator:P38987 GermOnline:YML064C Uniprot:P38987
Length = 245
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 76/185 (41%), Positives = 114/185 (61%)
Query: 99 VSLKISLLGDCQIGKTSFVVKYVGNEQERSL-QMAGLNLINKTLMVQGARIAFSIWDVGG 157
V +++ L+GD Q+GKTS +VKYV N ++ Q G+N + + + ++ I FSI D+GG
Sbjct: 19 VEVQVGLVGDAQVGKTSLMVKYVQNIYDKEYTQTLGVNFLKRKVSIRSTDIIFSIMDLGG 78
Query: 158 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 217
+ +PIA + I+F+FDLT TL+SI WY +A N +AIPIL+GTK+D +
Sbjct: 79 QREFINMLPIATVGSSVIIFLFDLTRPETLSSIKEWYRQAYGLNDSAIPILVGTKYDLLI 138
Query: 218 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 277
L P+ Q I+ + YA+ M A L F S +IN+ KIFK +AK+FNL T+ I
Sbjct: 139 DLDPEYQEQISRTSMKYAQVMNAPLIFCSTAKSINIQKIFKIALAKIFNLTLTIPEINEI 198
Query: 278 GEPII 282
G+P++
Sbjct: 199 GDPLL 203
>FB|FBgn0086913 [details] [associations]
symbol:Rab26 "Rab26" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=ISS] [GO:0031226 "intrinsic to plasma membrane"
evidence=ISS] [GO:0017157 "regulation of exocytosis" evidence=ISS]
[GO:0031982 "vesicle" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
EMBL:AE014296 GO:GO:0015031 GO:GO:0031226 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0017157 GeneTree:ENSGT00700000104031 CTD:25837
EMBL:AY061826 RefSeq:NP_649303.2 UniGene:Dm.1033 HSSP:Q9ULW5
ProteinModelPortal:Q9VP48 SMR:Q9VP48 IntAct:Q9VP48 MINT:MINT-315772
PaxDb:Q9VP48 PRIDE:Q9VP48 EnsemblMetazoa:FBtr0112677 GeneID:40359
KEGG:dme:Dmel_CG34410 UCSC:CG34410-RB FlyBase:FBgn0086913
InParanoid:Q9VP48 OMA:THHDDAS OrthoDB:EOG4FFBHX GenomeRNAi:40359
NextBio:818369 Bgee:Q9VP48 Uniprot:Q9VP48
Length = 388
Score = 200 (75.5 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 50/122 (40%), Positives = 70/122 (57%)
Query: 97 DLVSLKISLLGDCQIGKTSFVVKY-VGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWD 154
D V+ K LLGD +GKTSF+VKY G + S G+ L NK ++V G R+ IWD
Sbjct: 187 DTVNHKTILLGDSGVGKTSFLVKYNTGEFRLGSFSATVGIALTNKVVVVDGTRVKLQIWD 246
Query: 155 VGGDSRSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTK 212
G R F V A +DA A+L ++D+T++ T ++I W E R++ Q + I LIG K
Sbjct: 247 TAGQER-FRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNK 305
Query: 213 FD 214
D
Sbjct: 306 AD 307
>SGD|S000001889 [details] [associations]
symbol:SEC4 "Rab family GTPase essential for exocytic
secretion and autophagy" species:4932 "Saccharomyces cerevisiae"
[GO:0007107 "membrane addition at site of cytokinesis"
evidence=IEP;IGI;IMP] [GO:0006914 "autophagy" evidence=IGI;IMP]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA;TAS] [GO:0007121 "bipolar cellular bud
site selection" evidence=TAS] [GO:0030478 "actin cap" evidence=TAS]
[GO:0030133 "transport vesicle" evidence=TAS] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006906 "vesicle fusion"
evidence=IMP] [GO:0006893 "Golgi to plasma membrane transport"
evidence=IMP] [GO:0005741 "mitochondrial outer membrane"
evidence=IDA] [GO:0006887 "exocytosis" evidence=IEA;IDA]
[GO:0031321 "ascospore-type prospore assembly" evidence=IMP]
[GO:0000131 "incipient cellular bud site" evidence=IDA] [GO:0000910
"cytokinesis" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0006810
"transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA;IDA] [GO:0030658 "transport vesicle membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 SGD:S000001889
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0005741 GO:GO:0015031 GO:GO:0003924 GO:GO:0006914 EMBL:D50617
EMBL:BK006940 GO:GO:0006887 PROSITE:PS51419 GO:GO:0030133
GO:GO:0030658 eggNOG:COG1100 GO:GO:0006893 GO:GO:0030478
GO:GO:0000131 GO:GO:0006906 GO:GO:0007121 GO:GO:0031321 PDB:3CPH
PDBsum:3CPH GO:GO:0007107 KO:K07976 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104031 OMA:AMGIVLI PDB:2EQB PDB:2OCY
PDBsum:2EQB PDBsum:2OCY EMBL:M16507 EMBL:AY692843 PIR:A25959
RefSeq:NP_116650.1 PDB:1G16 PDB:1G17 PDBsum:1G16 PDBsum:1G17
ProteinModelPortal:P07560 SMR:P07560 DIP:DIP-2492N IntAct:P07560
MINT:MINT-689902 STRING:P07560 PaxDb:P07560 PeptideAtlas:P07560
PRIDE:P07560 EnsemblFungi:YFL005W GeneID:850543 KEGG:sce:YFL005W
CYGD:YFL005w OrthoDB:EOG4X3M9K EvolutionaryTrace:P07560
NextBio:966307 Genevestigator:P07560 GermOnline:YFL005W
Uniprot:P07560
Length = 215
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 57/189 (30%), Positives = 96/189 (50%)
Query: 79 AGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLI 137
+GL +S + +G DS +KI L+GD +GK+ +V++V ++ S + G++
Sbjct: 2 SGLRTVSASSGNGKSYDS---IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFK 58
Query: 138 NKTLMVQGARIAFSIWDVGGDSRSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSE 196
KT+ + G ++ +WD G R F + A + A+ I+ ++D+T T +I W+
Sbjct: 59 IKTVDINGKKVKLQLWDTAGQER-FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKT 117
Query: 197 ARKW-NQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNK 255
+ N A +L+G K D R+ A Q A AK + SSA ++ NVN+
Sbjct: 118 VNEHANDEAQLLLVGNKSDMETRV------VTADQGEALAKELGIPFIESSAKNDDNVNE 171
Query: 256 IFKFIMAKL 264
IF F +AKL
Sbjct: 172 IF-FTLAKL 179
>FB|FBgn0015793 [details] [associations]
symbol:Rab19 "Rab19" species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=ISS] [GO:0005097 "Rab GTPase
activator activity" evidence=ISS] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AE014296 GO:GO:0015031
eggNOG:COG1100 GO:GO:0005097 KO:K07976 HSSP:P07560
GeneTree:ENSGT00700000104044 OMA:LIGDCGT EMBL:AY071400 EMBL:D84348
RefSeq:NP_523970.1 UniGene:Dm.2555 SMR:O18339
EnsemblMetazoa:FBtr0076705 EnsemblMetazoa:FBtr0331832 GeneID:38930
KEGG:dme:Dmel_CG7062 UCSC:CG7062-RA CTD:38930 FlyBase:FBgn0015793
InParanoid:O18339 OrthoDB:EOG4PG4GW GenomeRNAi:38930 NextBio:811064
Uniprot:O18339
Length = 219
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 50/167 (29%), Positives = 82/167 (49%)
Query: 102 KISLLGDCQIGKTSFVVKY-VGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
KI L+GDC GKT V ++ GN ER G++ KT+ V+G +I IWD G R
Sbjct: 23 KIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQER 82
Query: 161 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQT-AIPILIGTKFDDFVRL 219
+ A +L ++D+T R + +++ W E R++ + + IL+G K D +
Sbjct: 83 FRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQR 142
Query: 220 PPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 264
D + +AR + + LF +SA N+NV F+ + +L
Sbjct: 143 EVDFE-----EARQMCQYIPEILFVMETSAKENMNVEDAFRCLANEL 184
>DICTYBASE|DDB_G0291738 [details] [associations]
symbol:rabG1 "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0291738 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GenomeReviews:CM000155_GR GO:GO:0015031 EMBL:AAFI02000182
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HSSP:Q15907
RefSeq:XP_629970.1 ProteinModelPortal:Q54E92 PRIDE:Q54E92
EnsemblProtists:DDB0229406 GeneID:8628300 KEGG:ddi:DDB_G0291738
OMA:FQETSVN ProtClustDB:CLSZ2429520 Uniprot:Q54E92
Length = 196
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 48/174 (27%), Positives = 84/174 (48%)
Query: 95 DSDLVSLKISLLGDCQIGKTSFVVKYV--GNEQERSLQMAGLNLINKTLMVQGARIAFSI 152
DSD+ KI L+GD +GKTS ++++ N QE S+ M ++ NK + + G I
Sbjct: 3 DSDV--FKILLIGDSAVGKTSLLLRFTDPNNFQETSVNMTSVDYKNKNITIDGRTFNLQI 60
Query: 153 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGT 211
WD G R + A +L +D+T + T N++ W E +++ + +L+G
Sbjct: 61 WDTAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNVGLWMQEIQRYGVLGVSRVLVGN 120
Query: 212 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 265
K D D + A+ A+ YA + +SAT +NV + F + +++
Sbjct: 121 KCD-----LEDRKLVNASIAQEYADILGIPFIETSATTGVNVEEAFMAMADEIY 169
>ASPGD|ASPL0000015781 [details] [associations]
symbol:srgH species:162425 "Emericella nidulans"
[GO:0005769 "early endosome" evidence=IDA] [GO:0006897
"endocytosis" evidence=IMP] [GO:0005525 "GTP binding" evidence=IDA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IMP] [GO:0006623 "protein targeting to vacuole"
evidence=IMP] [GO:0044088 "regulation of vacuole organization"
evidence=IMP] [GO:0005770 "late endosome" evidence=IDA] [GO:0006913
"nucleocytoplasmic transport" evidence=IEA] [GO:0006184 "GTP
catabolic process" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IEA] [GO:0031338 "regulation of vesicle fusion"
evidence=IEA] [GO:0070314 "G1 to G0 transition" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:BN001302 eggNOG:COG1100 EMBL:AACD01000062 KO:K07976
HOGENOM:HOG000233968 OMA:PTSRTCC OrthoDB:EOG4S1XHJ
RefSeq:XP_661446.1 ProteinModelPortal:Q5B6I8 SMR:Q5B6I8
EnsemblFungi:CADANIAT00004864 GeneID:2873265 KEGG:ani:AN3842.2
Uniprot:Q5B6I8
Length = 218
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 53/199 (26%), Positives = 93/199 (46%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMV-QGA 146
++G + K+ LLG+ +GK+S V+++V ++ + + G + +T+ + +
Sbjct: 6 AAGARPGARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDEST 65
Query: 147 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEA-RKWNQTAI 205
+ F IWD G R P+ ++A + ++D+T +L+ W E R+ N+ +
Sbjct: 66 TVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIV 125
Query: 206 PILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 265
L G K D V PD + A AYA+ F +SA + NV ++F I KL
Sbjct: 126 IALAGNKLD-LVTENPDKRAIPTADAEAYAREAGLLFFETSAKTSSNVRELFTAIAKKL- 183
Query: 266 NLPWTVKRNL-TIGEPIID 283
L RN+ T P +D
Sbjct: 184 PLDQAGPRNMRTAPRPGVD 202
>DICTYBASE|DDB_G0290783 [details] [associations]
symbol:rabG2 "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0290783 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GenomeReviews:CM000154_GR PROSITE:PS51419 eggNOG:COG1100
EMBL:AAFI02000171 KO:K07976 HSSP:P62820 ProtClustDB:CLSZ2429520
RefSeq:XP_635528.1 ProteinModelPortal:Q54FL2 GeneID:8627825
KEGG:ddi:DDB_G0290783 Uniprot:Q54FL2
Length = 197
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 46/172 (26%), Positives = 82/172 (47%)
Query: 96 SDLVSLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWD 154
SD KI L+GD +GKTS ++++ N QE S+ M ++ NK +++ G IWD
Sbjct: 2 SDPDVFKILLIGDSAVGKTSLLLRFADNSFQETSVNMTSVDYKNKNIVIDGRTFNLQIWD 61
Query: 155 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKF 213
G R + A +L +D+T + T N++ W E +++ + +L+G K
Sbjct: 62 TAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNVRLWMQEIQRYAVLGVSRVLVGNKC 121
Query: 214 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 265
D D + + AR YA ++ +SA +NV + F + +++
Sbjct: 122 D-----LEDRKLVNTSIAREYADSLGIPFMEASAATGVNVEEAFMAMANEIY 168
>FB|FBgn0052670 [details] [associations]
symbol:Rab9Fb "Rab at 9Fb" species:7227 "Drosophila
melanogaster" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AE014298
KO:K07976 HSSP:P07560 GeneTree:ENSGT00700000104049 EMBL:BT024998
RefSeq:NP_727472.1 UniGene:Dm.31082 SMR:Q8IR98
EnsemblMetazoa:FBtr0073401 GeneID:32029 KEGG:dme:Dmel_CG32670
UCSC:CG32670-RA CTD:32029 FlyBase:FBgn0052670 InParanoid:Q8IR98
OMA:KTCLLQR OrthoDB:EOG4RN8RG GenomeRNAi:32029 NextBio:776451
Uniprot:Q8IR98
Length = 214
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 45/167 (26%), Positives = 79/167 (47%)
Query: 102 KISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
KI +LGD +GK+ ++++ N E+ + G++ + + + G + IWD GD R
Sbjct: 9 KILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDER 68
Query: 161 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVRL 219
+P + A IL ++D+TS + +I GW E R+ + ++ + L+G K DD
Sbjct: 69 FKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDL--- 125
Query: 220 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 266
D + Q YA + SA NVN +F + ++N
Sbjct: 126 --DNRQVRMEQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYN 170
>UNIPROTKB|F1MHP4 [details] [associations]
symbol:RAB22A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0007032
"endosome organization" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015629
GO:GO:0015031 GO:GO:0003924 GO:GO:0006897 GO:GO:0007032
GO:GO:0005769 GeneTree:ENSGT00640000091139 OMA:TDTNPPS
EMBL:DAAA02036338 IPI:IPI00854462 UniGene:Bt.19047
Ensembl:ENSBTAT00000024031 Uniprot:F1MHP4
Length = 194
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 44/161 (27%), Positives = 80/161 (49%)
Query: 98 LVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 156
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 157 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 216
G R P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 217 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
+ D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 I----DVREVMERDAKDYADSIHAVFVETSAKNAININELF 159
>UNIPROTKB|Q0IIG7 [details] [associations]
symbol:RAB5A "Ras-related protein Rab-5A" species:9913 "Bos
taurus" [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006897 "endocytosis" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0042470 "melanosome"
evidence=IEA] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0007399 GO:GO:0030154
GO:GO:0031901 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0001726 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:BC122651
IPI:IPI00693824 RefSeq:NP_001069654.1 UniGene:Bt.24043
ProteinModelPortal:Q0IIG7 SMR:Q0IIG7 STRING:Q0IIG7 PRIDE:Q0IIG7
GeneID:539764 KEGG:bta:539764 CTD:5868 InParanoid:Q0IIG7 KO:K07887
OrthoDB:EOG4Z0B6M NextBio:20878203 Uniprot:Q0IIG7
Length = 215
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 55/198 (27%), Positives = 90/198 (45%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQG 145
T +G +T + + K+ LLG+ +GK+S V+++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 146 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 205
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 206 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
Query: 265 -FNLPWTVKRNLTIGEPI 281
N P N T G +
Sbjct: 182 PKNEPQNPGANSTRGRGV 199
>UNIPROTKB|F1PGI1 [details] [associations]
symbol:RAB21 "Ras-related protein Rab-21" species:9615
"Canis lupus familiaris" [GO:0019003 "GDP binding" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0005768
GO:GO:0003924 GO:GO:0019003 GeneTree:ENSGT00640000091439
EMBL:AAEX03007069 Ensembl:ENSCAFT00000000732 Uniprot:F1PGI1
Length = 238
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 44/160 (27%), Positives = 81/160 (50%)
Query: 100 SLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 158
S K+ LLG+ +GKTS V++Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 32 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 91
Query: 159 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 217
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 92 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 148
Query: 218 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 149 -LEKERHVSIQ-EAESYAESVGAKHYHTSAKQNKGIEELF 186
>UNIPROTKB|P55745 [details] [associations]
symbol:RAB21 "Ras-related protein Rab-21" species:9615
"Canis lupus familiaris" [GO:0006184 "GTP catabolic process"
evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS] [GO:0019003
"GDP binding" evidence=ISS] [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0031901
GO:GO:0000139 GO:GO:0005789 GO:GO:0015031 GO:GO:0003924
GO:GO:0030659 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OrthoDB:EOG4W0XF0
ProteinModelPortal:P55745 SMR:P55745 PRIDE:P55745 Uniprot:P55745
Length = 223
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 44/160 (27%), Positives = 81/160 (50%)
Query: 100 SLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 158
S K+ LLG+ +GKTS V++Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 17 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 76
Query: 159 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 217
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 77 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 133
Query: 218 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 134 -LEKERHVSIQ-EAESYAESVGAKHYHTSAKQNKGIEELF 171
>UNIPROTKB|Q9UL25 [details] [associations]
symbol:RAB21 "Ras-related protein Rab-21" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA]
[GO:0031901 "early endosome membrane" evidence=IEA] [GO:0032154
"cleavage furrow" evidence=IEA] [GO:0019003 "GDP binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IDA] [GO:0005768 "endosome" evidence=IDA]
[GO:0006184 "GTP catabolic process" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0031901 GO:GO:0000139
GO:GO:0005789 GO:GO:0015031 GO:GO:0005768 GO:GO:0003924
GO:GO:0030659 PROSITE:PS51419 GO:GO:0032154 eggNOG:COG1100
GO:GO:0019003 BRENDA:3.6.5.2 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:23011 KO:K07890 OrthoDB:EOG4W0XF0
EMBL:AF091035 EMBL:BC021901 EMBL:BC092475 EMBL:D42087
IPI:IPI00007755 RefSeq:NP_055814.1 UniGene:Hs.524590 PDB:1YZT
PDB:1YZU PDB:1Z08 PDB:1Z0I PDB:2OT3 PDBsum:1YZT PDBsum:1YZU
PDBsum:1Z08 PDBsum:1Z0I PDBsum:2OT3 ProteinModelPortal:Q9UL25
SMR:Q9UL25 DIP:DIP-29349N IntAct:Q9UL25 MINT:MINT-3081967
STRING:Q9UL25 PhosphoSite:Q9UL25 DMDM:13633613 PaxDb:Q9UL25
PeptideAtlas:Q9UL25 PRIDE:Q9UL25 DNASU:23011
Ensembl:ENST00000261263 GeneID:23011 KEGG:hsa:23011 UCSC:uc001swt.3
GeneCards:GC12P072100 HGNC:HGNC:18263 HPA:HPA016988 MIM:612398
neXtProt:NX_Q9UL25 PharmGKB:PA34111 InParanoid:Q9UL25 OMA:SHFFASA
PhylomeDB:Q9UL25 ChiTaRS:RAB21 EvolutionaryTrace:Q9UL25
GenomeRNAi:23011 NextBio:43928 ArrayExpress:Q9UL25 Bgee:Q9UL25
CleanEx:HS_RAB21 Genevestigator:Q9UL25 GermOnline:ENSG00000080371
Uniprot:Q9UL25
Length = 225
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 44/160 (27%), Positives = 81/160 (50%)
Query: 100 SLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 158
S K+ LLG+ +GKTS V++Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 19 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 78
Query: 159 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 217
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 79 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 135
Query: 218 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 136 -LEKERHVSIQ-EAESYAESVGAKHYHTSAKQNKGIEELF 173
>UNIPROTKB|A5GHL0 [details] [associations]
symbol:RAB22A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0007032
"endosome organization" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015629
GO:GO:0015031 GO:GO:0003924 GO:GO:0006897 GO:GO:0007032
GO:GO:0005769 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 CTD:57403
KO:K07891 OrthoDB:EOG4CRM14 OMA:TDTNPPS EMBL:CT009685
RefSeq:NP_001116646.1 UniGene:Ssc.10486 ProteinModelPortal:A5GHL0
SMR:A5GHL0 Ensembl:ENSSSCT00000008229 GeneID:100144535
KEGG:ssc:100144535 ArrayExpress:A5GHL0 Uniprot:A5GHL0
Length = 194
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 44/161 (27%), Positives = 80/161 (49%)
Query: 98 LVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 156
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 157 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 216
G R P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 217 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
+ D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 I----DVREVLERDAKDYADSIHAIFVETSAKNAININELF 159
>UNIPROTKB|F1SH25 [details] [associations]
symbol:RAB21 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019003 "GDP binding" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005768 GO:GO:0003924 GO:GO:0019003 KO:K07890 OMA:FQKVKSW
GeneTree:ENSGT00640000091439 EMBL:CU457452 RefSeq:XP_003481707.1
Ensembl:ENSSSCT00000000550 GeneID:100736618 KEGG:ssc:100736618
Uniprot:F1SH25
Length = 222
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 44/160 (27%), Positives = 81/160 (50%)
Query: 100 SLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 158
S K+ LLG+ +GKTS V++Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 16 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 75
Query: 159 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 217
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 76 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 132
Query: 218 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 133 -LEKERHVSIQ-EAESYAESVGAKHYHTSAKQNKGIEELF 170
>MGI|MGI:105072 [details] [associations]
symbol:Rab22a "RAB22A, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=IDA] [GO:0005768 "endosome" evidence=IEA]
[GO:0005769 "early endosome" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006897
"endocytosis" evidence=ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0019003 "GDP binding"
evidence=ISO] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0042995 "cell projection" evidence=IEA] [GO:0045335 "phagocytic
vesicle" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105072 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015629 GO:GO:0015031 GO:GO:0003924
GO:GO:0006897 GO:GO:0016023 GO:GO:0010008 GO:GO:0001726
PROSITE:PS51419 GO:GO:0007032 GO:GO:0005769 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:57403
KO:K07891 OrthoDB:EOG4CRM14 OMA:TDTNPPS EMBL:AJ311124 EMBL:AK031667
EMBL:AK146594 EMBL:AK150617 EMBL:BC006596 EMBL:M79304
IPI:IPI00116729 PIR:JH0644 RefSeq:NP_077756.2 UniGene:Mm.275304
PDB:1YVD PDB:1Z0J PDBsum:1YVD PDBsum:1Z0J ProteinModelPortal:P35285
SMR:P35285 STRING:P35285 PhosphoSite:P35285 PaxDb:P35285
PRIDE:P35285 Ensembl:ENSMUST00000029024 GeneID:19334 KEGG:mmu:19334
InParanoid:P35285 ChiTaRS:RAB22A EvolutionaryTrace:P35285
NextBio:296319 Bgee:P35285 CleanEx:MM_RAB22A Genevestigator:P35285
GermOnline:ENSMUSG00000027519 Uniprot:P35285
Length = 194
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 46/162 (28%), Positives = 82/162 (50%)
Query: 98 LVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 156
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 157 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDD 215
G R P+ + + A + ++D+T T +++ W E R+ +I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCD- 121
Query: 216 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 122 ----LTDVREVMERDAKDYADSIHAIFVETSAKNAININELF 159
>UNIPROTKB|Q17R06 [details] [associations]
symbol:RAB21 "Ras-related protein Rab-21" species:9913 "Bos
taurus" [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0019003 "GDP binding"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0031901 "early endosome membrane" evidence=IEA] [GO:0030659
"cytoplasmic vesicle membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0031901
GO:GO:0000139 GO:GO:0005789 GO:GO:0015031 GO:GO:0003924
GO:GO:0030659 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:BC118088
IPI:IPI00697565 RefSeq:NP_001068785.1 UniGene:Bt.34284
ProteinModelPortal:Q17R06 SMR:Q17R06 PRIDE:Q17R06 GeneID:507488
KEGG:bta:507488 CTD:23011 InParanoid:Q17R06 KO:K07890
OrthoDB:EOG4W0XF0 NextBio:20868087 Uniprot:Q17R06
Length = 222
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 44/160 (27%), Positives = 81/160 (50%)
Query: 100 SLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 158
S K+ LLG+ +GKTS V++Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 16 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 75
Query: 159 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 217
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 76 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVD--- 132
Query: 218 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 133 -LEKERHVSIQ-EAESYAESVGAKHYHTSAKQNKGIEELF 170
>UNIPROTKB|Q9UL26 [details] [associations]
symbol:RAB22A "Ras-related protein Rab-22A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007032 "endosome organization" evidence=IEP] [GO:0006897
"endocytosis" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0019003 "GDP binding" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
EMBL:CH471077 GO:GO:0007264 GO:GO:0015629 GO:GO:0015031
GO:GO:0003924 GO:GO:0006897 GO:GO:0016023 GO:GO:0010008
GO:GO:0001726 PROSITE:PS51419 GO:GO:0007032 GO:GO:0005769
eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351 EMBL:AL035455
HOGENOM:HOG000233968 CTD:57403 KO:K07891 OrthoDB:EOG4CRM14
EMBL:AF125104 EMBL:AF091034 EMBL:AJ276210 EMBL:BT007046
EMBL:AK091180 EMBL:BC015710 EMBL:BC063457 IPI:IPI00007756
RefSeq:NP_065724.1 UniGene:Hs.529044 ProteinModelPortal:Q9UL26
SMR:Q9UL26 IntAct:Q9UL26 MINT:MINT-5003659 STRING:Q9UL26
PhosphoSite:Q9UL26 DMDM:13633614 PaxDb:Q9UL26 PRIDE:Q9UL26
DNASU:57403 Ensembl:ENST00000244040 GeneID:57403 KEGG:hsa:57403
UCSC:uc002xyz.3 GeneCards:GC20P056884 HGNC:HGNC:9764 MIM:612966
neXtProt:NX_Q9UL26 PharmGKB:PA34112 InParanoid:Q9UL26 OMA:TDTNPPS
PhylomeDB:Q9UL26 GenomeRNAi:57403 NextBio:63508 ArrayExpress:Q9UL26
Bgee:Q9UL26 CleanEx:HS_RAB22A Genevestigator:Q9UL26
GermOnline:ENSG00000124209 Uniprot:Q9UL26
Length = 194
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 44/161 (27%), Positives = 80/161 (49%)
Query: 98 LVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 156
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 157 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 216
G R P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 217 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
+ D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 I----DVREVMERDAKDYADSIHAIFVETSAKNAININELF 159
>UNIPROTKB|Q06AU6 [details] [associations]
symbol:RAB5A "Ras-related protein Rab-5A" species:9823 "Sus
scrofa" [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006897 "endocytosis" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0042470 "melanosome"
evidence=IEA] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0007399 GO:GO:0030154
GO:GO:0031901 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0001726 PROSITE:PS51419 GO:GO:0019003 HOVERGEN:HBG009351
CTD:5868 KO:K07887 EMBL:DQ917629 RefSeq:NP_001116652.1
UniGene:Ssc.53977 ProteinModelPortal:Q06AU6 SMR:Q06AU6
GeneID:100144499 KEGG:ssc:100144499 Uniprot:Q06AU6
Length = 215
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 55/198 (27%), Positives = 90/198 (45%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQG 145
T +G +T + + K+ LLG+ +GK+S V+++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 146 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 205
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 206 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
Query: 265 -FNLPWTVKRNLTIGEPI 281
N P N T G +
Sbjct: 182 PKNEPQNPGINCTRGRGV 199
>MGI|MGI:894308 [details] [associations]
symbol:Rab21 "RAB21, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005768 "endosome" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0019003 "GDP binding" evidence=ISO]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:894308 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0031901 GO:GO:0000139 GO:GO:0005789
GO:GO:0015031 GO:GO:0003924 GO:GO:0030659 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351 CTD:23011 KO:K07890
OrthoDB:EOG4W0XF0 OMA:SHFFASA EMBL:BC055042 EMBL:M79302
IPI:IPI00337980 PIR:A38879 RefSeq:NP_077774.1 UniGene:Mm.21936
ProteinModelPortal:P35282 SMR:P35282 IntAct:P35282 STRING:P35282
PhosphoSite:P35282 PaxDb:P35282 PRIDE:P35282
Ensembl:ENSMUST00000020343 GeneID:216344 KEGG:mmu:216344
InParanoid:P35282 NextBio:375111 Bgee:P35282 CleanEx:MM_RAB21
Genevestigator:P35282 GermOnline:ENSMUSG00000020132 Uniprot:P35282
Length = 222
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 44/160 (27%), Positives = 81/160 (50%)
Query: 100 SLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 158
S K+ LLG+ +GKTS V++Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 17 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 76
Query: 159 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 217
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 77 ERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 133
Query: 218 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 134 -LEKERHVSIQ-EAESYAESVGAKHYHTSAKQNKGIEELF 171
>RGD|1303150 [details] [associations]
symbol:Rab21 "RAB21, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=ISO;ISS] [GO:0005525 "GTP
binding" evidence=ISO;ISS] [GO:0005768 "endosome" evidence=ISO]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO;ISS] [GO:0030659 "cytoplasmic vesicle
membrane" evidence=IEA] [GO:0031901 "early endosome membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:1303150 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0031901 GO:GO:0000139 GO:GO:0005789 GO:GO:0015031
GO:GO:0003924 GO:GO:0030659 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 HSSP:Q9UL25 HOGENOM:HOG000233968
CTD:23011 KO:K07890 OrthoDB:EOG4W0XF0 OMA:SHFFASA EMBL:BC079323
IPI:IPI00366221 RefSeq:NP_001004238.1 UniGene:Rn.162952
ProteinModelPortal:Q6AXT5 SMR:Q6AXT5 PhosphoSite:Q6AXT5
PRIDE:Q6AXT5 Ensembl:ENSRNOT00000005258 GeneID:299799
KEGG:rno:299799 UCSC:RGD:1303150 GeneTree:ENSGT00640000091439
InParanoid:Q6AXT5 NextBio:645786 Genevestigator:Q6AXT5
Uniprot:Q6AXT5
Length = 223
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 44/160 (27%), Positives = 81/160 (50%)
Query: 100 SLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 158
S K+ LLG+ +GKTS V++Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 17 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 76
Query: 159 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 217
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 77 ERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 133
Query: 218 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 134 -LEKERHVSIQ-EAESYAESVGAKHYHTSAKQNKGIEELF 171
>UNIPROTKB|O88565 [details] [associations]
symbol:Rab5a "Protein Rab5a" species:10116 "Rattus
norvegicus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:620936 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0015629 GO:GO:0015031
GO:GO:0003924 GO:GO:0045121 GO:GO:0030139 GO:GO:0001726
GO:GO:0005769 eggNOG:COG1100 GO:GO:0051489 GO:GO:0019003
GO:GO:0045921 GO:GO:2000286 HOVERGEN:HBG009351 HOGENOM:HOG000233968
HSSP:P20339 CTD:5868 KO:K07887 OrthoDB:EOG4Z0B6M OMA:EPQNTGA
EMBL:CH474184 EMBL:AF072935 EMBL:BC161848 IPI:IPI00210733
RefSeq:NP_073183.1 UniGene:Rn.44477 SMR:O88565 IntAct:O88565
MINT:MINT-4584734 STRING:O88565 Ensembl:ENSRNOT00000016813
GeneID:64633 KEGG:rno:64633 InParanoid:O88565 NextBio:613600
Genevestigator:O88565 Uniprot:O88565
Length = 215
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 50/180 (27%), Positives = 85/180 (47%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQG 145
T +G +T + + K+ LLG+ +GK+S V+++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 146 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 205
+ F IWD G R P+ + A A + ++D+T+ + + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFSRAKNWVKELQRQASPNI 126
Query: 206 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>WB|WBGene00004279 [details] [associations]
symbol:rab-21 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0009792 GO:GO:0007264
GO:GO:0015031 eggNOG:COG1100 EMBL:Z66499 HOGENOM:HOG000233968
HSSP:P20339 KO:K07890 GeneTree:ENSGT00640000091439 PIR:T24268
RefSeq:NP_495854.1 ProteinModelPortal:Q22045 SMR:Q22045
IntAct:Q22045 STRING:Q22045 PaxDb:Q22045 EnsemblMetazoa:T01B7.3.1
EnsemblMetazoa:T01B7.3.2 GeneID:187932 KEGG:cel:CELE_T01B7.3
UCSC:T01B7.3 CTD:187932 WormBase:T01B7.3 InParanoid:Q22045
OMA:GARYLET NextBio:937000 Uniprot:Q22045
Length = 207
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 49/174 (28%), Positives = 84/174 (48%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFS 151
+ D KI LLG+ +GK+S V+++V N+ + L + NKT+ V+ +
Sbjct: 5 NVDQKSFKFKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLH 64
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIG 210
IWD G + PI + + +L +FD+T R + + W E + TA +++G
Sbjct: 65 IWDTAGQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVG 124
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
K D L + Q T A AYA++ A +SA N+ ++ F+ + AK+
Sbjct: 125 NKID----LEEERQVT-RQDAEAYAESEGALYMETSAQDNVGISDAFESLTAKM 173
>UNIPROTKB|F1NC27 [details] [associations]
symbol:RAB21 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0019003 "GDP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0003924 GO:GO:0019003 OMA:FQKVKSW
GeneTree:ENSGT00640000091439 EMBL:AADN02009843 IPI:IPI00581530
Ensembl:ENSGALT00000016553 Uniprot:F1NC27
Length = 228
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 43/160 (26%), Positives = 80/160 (50%)
Query: 100 SLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 158
S K+ LLG+ +GKTS V++Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 23 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 82
Query: 159 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 217
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 83 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 139
Query: 218 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
L + ++ +A YA+++ A + +SA N + ++F
Sbjct: 140 -LEKERHVSVQ-EAETYAESVGAKHYHTSAKQNKGIEELF 177
>UNIPROTKB|D4A0G7 [details] [associations]
symbol:LOC100364984 "RCG35079, isoform CRA_b" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030141 "secretory granule" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:2319982 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0030141
GO:GO:0005793 EMBL:CH473948 GeneTree:ENSGT00700000104031 KO:K07914
IPI:IPI00368131 RefSeq:XP_002724622.1 Ensembl:ENSRNOT00000004311
GeneID:100364984 KEGG:rno:100364984 Uniprot:D4A0G7
Length = 223
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 45/136 (33%), Positives = 71/136 (52%)
Query: 83 ELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNE--QERSLQMAGLNLINKT 140
E S FS YD K+ LLGD +GKT F++++ + G++ NK
Sbjct: 17 ERSPPFSPNYDLTG-----KVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKV 71
Query: 141 LMVQGARIAFSIWDVGGDSRSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARK 199
+ V GAR+ IWD G R F V A +DA A+L ++D+T++ + ++I W +E +
Sbjct: 72 VTVDGARVKLQIWDTAGQER-FRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHE 130
Query: 200 WNQTAIPI-LIGTKFD 214
+ Q + I L+G K D
Sbjct: 131 YAQRDVVIMLLGNKAD 146
>UNIPROTKB|Q5ZLB8 [details] [associations]
symbol:RAB22A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005769 "early
endosome" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015629 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0007032 GO:GO:0005769 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 CTD:57403
KO:K07891 OrthoDB:EOG4CRM14 OMA:TDTNPPS EMBL:AADN02018996
EMBL:AJ719816 IPI:IPI00593951 RefSeq:NP_001026038.1
UniGene:Gga.7554 SMR:Q5ZLB8 Ensembl:ENSGALT00000012215
GeneID:419318 KEGG:gga:419318 InParanoid:Q5ZLB8 NextBio:20822399
Uniprot:Q5ZLB8
Length = 194
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 46/162 (28%), Positives = 81/162 (50%)
Query: 98 LVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 156
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 157 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDD 215
G R P+ + + A + ++D+T T +++ W E R+ I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCD- 121
Query: 216 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 122 ----LNDVREVMEKDAKDYADSIHAIFVETSAKNAININELF 159
>TAIR|locus:2042321 [details] [associations]
symbol:RAB6A species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS;IDA] [GO:0005794 "Golgi
apparatus" evidence=ISM;IDA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005774 "vacuolar membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0032940 "secretion by cell" evidence=IGI] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0005774 GO:GO:0007264
GO:GO:0000139 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0032940
GO:GO:0016192 GO:GO:0015031 GO:GO:0005768 EMBL:AC003672
GO:GO:0005802 PROSITE:PS51419 eggNOG:COG1100 HOGENOM:HOG000233968
KO:K07893 OMA:TTKWIED HSSP:P20340 EMBL:BT025780 EMBL:AK226988
EMBL:AY087904 IPI:IPI00530291 PIR:T01588 RefSeq:NP_181989.1
UniGene:At.24965 ProteinModelPortal:O80501 SMR:O80501 STRING:O80501
PaxDb:O80501 PRIDE:O80501 EnsemblPlants:AT2G44610.1 GeneID:819069
KEGG:ath:AT2G44610 TAIR:At2g44610 InParanoid:O80501
PhylomeDB:O80501 ProtClustDB:CLSN2683217 Genevestigator:O80501
Uniprot:O80501
Length = 208
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 44/171 (25%), Positives = 83/171 (48%)
Query: 96 SDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWD 154
S L K+ LGD +GKTS + +++ ++ + + Q G++ ++KT+ ++ + +WD
Sbjct: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
Query: 155 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKF 213
G R +P +D+ + ++D+ SR + + W E R + I +L+G K
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLVGNKT 124
Query: 214 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
D L Q +I +A A A+ + +SA N+ +F+ I A L
Sbjct: 125 D----LVDKRQVSIE-EAEAKARELNVMFIETSAKAGFNIKALFRKIAAAL 170
>ZFIN|ZDB-GENE-031118-30 [details] [associations]
symbol:rab5c "RAB5C, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IMP] [GO:0016337
"cell-cell adhesion" evidence=IMP] [GO:0030100 "regulation of
endocytosis" evidence=IMP] [GO:0001525 "angiogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005768 "endosome" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-031118-30
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005768 GO:GO:0001525 GO:GO:0030100 GO:GO:0016337
GO:GO:0001702 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 HSSP:P35278 GeneTree:ENSGT00640000091139
CTD:5878 KO:K07889 OMA:QCCGGGN EMBL:BX005093 EMBL:BC045466
EMBL:BC065634 IPI:IPI00499049 RefSeq:NP_958909.1 UniGene:Dr.5030
SMR:Q7ZVP2 IntAct:Q7ZVP2 STRING:Q7ZVP2 Ensembl:ENSDART00000034536
GeneID:386807 KEGG:dre:386807 InParanoid:Q7ZVP2 OrthoDB:EOG42FSJK
NextBio:20814025 Uniprot:Q7ZVP2
Length = 221
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 50/169 (29%), Positives = 77/169 (45%)
Query: 98 LVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVG 156
+ K+ LLG+ +GK+S V+++V G E G + +TL + + F IWD
Sbjct: 20 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKFEIWDTA 79
Query: 157 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDD 215
G R P+ + A A + ++D+T+ T W E ++ I I L G K D
Sbjct: 80 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADL 139
Query: 216 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
+ D Q +A+AYA +SA +NVN+IF I KL
Sbjct: 140 ANKRAVDFQ-----EAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 183
>UNIPROTKB|P18066 [details] [associations]
symbol:RAB5A "Ras-related protein Rab-5A" species:9615
"Canis lupus familiaris" [GO:0006184 "GTP catabolic process"
evidence=ISS] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006897 "endocytosis" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0042470 "melanosome"
evidence=IEA] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:2000286 "receptor internalization involved in
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0051489
"regulation of filopodium assembly" evidence=IEA] [GO:0045921
"positive regulation of exocytosis" evidence=IEA] [GO:0045121
"membrane raft" evidence=IEA] [GO:0030139 "endocytic vesicle"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0007399 GO:GO:0030154
GO:GO:0031901 GO:GO:0005811 GO:GO:0015629 GO:GO:0015031
GO:GO:0003924 GO:GO:0006897 GO:GO:0045121 GO:GO:0030139
GO:GO:0001726 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0051489
GO:GO:0019003 GO:GO:0045921 GO:GO:2000286 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 CTD:5868
KO:K07887 OrthoDB:EOG4Z0B6M EMBL:M35520 PIR:A30413
RefSeq:NP_001003317.1 UniGene:Cfa.40292 ProteinModelPortal:P18066
IntAct:P18066 STRING:P18066 PRIDE:P18066 Ensembl:ENSCAFT00000009363
GeneID:404008 KEGG:cfa:404008 InParanoid:P18066 OMA:EPQNTGA
NextBio:20817495 Uniprot:P18066
Length = 215
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 50/180 (27%), Positives = 84/180 (46%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQG 145
T +G +T + + K+ LLG+ +GK+S V+++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 146 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 205
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 206 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>UNIPROTKB|P20339 [details] [associations]
symbol:RAB5A "Ras-related protein Rab-5A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030139
"endocytic vesicle" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0001726 "ruffle" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0031901 "early endosome
membrane" evidence=IEA] [GO:0042470 "melanosome" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006897
"endocytosis" evidence=IDA] [GO:0005525 "GTP binding" evidence=IDA]
[GO:0019003 "GDP binding" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IDA] [GO:0005769 "early endosome" evidence=IDA]
[GO:0045921 "positive regulation of exocytosis" evidence=IMP]
[GO:0051489 "regulation of filopodium assembly" evidence=IDA]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0010008 "endosome
membrane" evidence=TAS] [GO:2000286 "receptor internalization
involved in canonical Wnt receptor signaling pathway" evidence=IMP]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_604 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0042470
GO:GO:0007264 GO:GO:0007399 GO:GO:0030154 GO:GO:0031901
EMBL:CH471055 GO:GO:0015629
Pathway_Interaction_DB:p38alphabetadownstreampathway GO:GO:0015031
GO:GO:0007596 GO:GO:0003924 GO:GO:0045121 GO:GO:0010008
GO:GO:0030139 GO:GO:0001726 PROSITE:PS51419 GO:GO:0005769
eggNOG:COG1100 GO:GO:0051489 GO:GO:0019003 GO:GO:0045921
GO:GO:2000286 HOVERGEN:HBG009351 PDB:3MJH PDBsum:3MJH
HOGENOM:HOG000233968 CTD:5868 KO:K07887 OrthoDB:EOG4Z0B6M
OMA:EPQNTGA EMBL:M28215 EMBL:AF464088 EMBL:AF498936 EMBL:AK312618
EMBL:CR536492 EMBL:BC001267 EMBL:BC018288 IPI:IPI00023510
PIR:F34323 RefSeq:NP_004153.2 UniGene:Hs.475663 PDB:1N6H PDB:1N6I
PDB:1N6K PDB:1N6L PDB:1N6N PDB:1N6O PDB:1N6P PDB:1N6R PDB:1R2Q
PDB:1TU3 PDB:1TU4 PDBsum:1N6H PDBsum:1N6I PDBsum:1N6K PDBsum:1N6L
PDBsum:1N6N PDBsum:1N6O PDBsum:1N6P PDBsum:1N6R PDBsum:1R2Q
PDBsum:1TU3 PDBsum:1TU4 ProteinModelPortal:P20339 SMR:P20339
DIP:DIP-380N IntAct:P20339 MINT:MINT-209361 STRING:P20339
PhosphoSite:P20339 DMDM:1346958 PaxDb:P20339 PRIDE:P20339
DNASU:5868 Ensembl:ENST00000273047 GeneID:5868 KEGG:hsa:5868
UCSC:uc003cbn.3 GeneCards:GC03P019963 HGNC:HGNC:9783 HPA:CAB004567
MIM:179512 neXtProt:NX_P20339 PharmGKB:PA34143 InParanoid:P20339
PhylomeDB:P20339 ChiTaRS:RAB5A EvolutionaryTrace:P20339
GenomeRNAi:5868 NextBio:22790 ArrayExpress:P20339 Bgee:P20339
CleanEx:HS_RAB5A Genevestigator:P20339 GermOnline:ENSG00000144566
Uniprot:P20339
Length = 215
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 50/180 (27%), Positives = 84/180 (46%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQG 145
T +G +T + + K+ LLG+ +GK+S V+++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 146 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 205
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 206 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>UNIPROTKB|P61271 [details] [associations]
symbol:RAB5A "Ras-related protein Rab-5A" species:9541
"Macaca fascicularis" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0006184 "GTP catabolic
process" evidence=ISS] [GO:0006897 "endocytosis" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0007399 GO:GO:0030154
GO:GO:0031901 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0001726 PROSITE:PS51419 GO:GO:0019003 HOVERGEN:HBG009351
EMBL:AB062987 ProteinModelPortal:P61271 PRIDE:P61271 Uniprot:P61271
Length = 215
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 50/180 (27%), Positives = 84/180 (46%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQG 145
T +G +T + + K+ LLG+ +GK+S V+++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 146 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 205
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 206 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>MGI|MGI:1929945 [details] [associations]
symbol:Rab37 "RAB37, member of RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005793 "endoplasmic reticulum-Golgi
intermediate compartment" evidence=ISO] [GO:0006184 "GTP catabolic
process" evidence=ISS] [GO:0006810 "transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0030141 "secretory granule" evidence=IDA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:1929945 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GO:GO:0030141 GO:GO:0003924
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:326624 KO:K07914 EMBL:AF233582
EMBL:AK050483 IPI:IPI00123180 RefSeq:NP_067386.3 UniGene:Mm.143789
ProteinModelPortal:Q9JKM7 SMR:Q9JKM7 IntAct:Q9JKM7 STRING:Q9JKM7
PhosphoSite:Q9JKM7 PaxDb:Q9JKM7 PRIDE:Q9JKM7 GeneID:58222
KEGG:mmu:58222 InParanoid:Q9JKM7 NextBio:314233 CleanEx:MM_RAB37
Genevestigator:Q9JKM7 GermOnline:ENSMUSG00000020732 Uniprot:Q9JKM7
Length = 223
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 45/136 (33%), Positives = 71/136 (52%)
Query: 83 ELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNE--QERSLQMAGLNLINKT 140
E S FS YD K+ LLGD +GKT F++++ + G++ NK
Sbjct: 17 ERSPPFSPNYDLTG-----KVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDSRNKV 71
Query: 141 LMVQGARIAFSIWDVGGDSRSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARK 199
+ V GAR+ IWD G R F V A +DA A+L ++D+T++ + ++I W +E +
Sbjct: 72 VTVDGARVKLQIWDTAGQER-FRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHE 130
Query: 200 WNQTAIPI-LIGTKFD 214
+ Q + I L+G K D
Sbjct: 131 YAQRDVVIMLLGNKAD 146
>MGI|MGI:105926 [details] [associations]
symbol:Rab5a "RAB5A, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001726 "ruffle" evidence=IDA] [GO:0003924
"GTPase activity" evidence=ISO;IDA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005768 "endosome"
evidence=IDA] [GO:0005769 "early endosome" evidence=ISO;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=ISO;IDA;TAS] [GO:0006810 "transport"
evidence=IEA] [GO:0006897 "endocytosis" evidence=ISO;IDA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0019001 "guanyl nucleotide binding"
evidence=IDA] [GO:0019003 "GDP binding" evidence=ISO] [GO:0030139
"endocytic vesicle" evidence=IDA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0045921 "positive
regulation of exocytosis" evidence=ISO] [GO:0051489 "regulation of
filopodium assembly" evidence=ISO] [GO:2000286 "receptor
internalization involved in canonical Wnt receptor signaling
pathway" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105926 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0007399 GO:GO:0030154
GO:GO:0031901 GO:GO:0015629 GO:GO:0015031 GO:GO:0003924
GO:GO:0006897 GO:GO:0045121 GO:GO:0030139 GO:GO:0001726
PROSITE:PS51419 GO:GO:0005769 eggNOG:COG1100 GO:GO:0051489
GO:GO:0019003 EMBL:CH466559 GO:GO:0045921 GO:GO:2000286
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00640000091139 CTD:5868 KO:K07887 OrthoDB:EOG4Z0B6M
OMA:EPQNTGA ChiTaRS:RAB5A EMBL:AB232593 EMBL:AK002631 EMBL:AK008198
EMBL:AK010495 EMBL:AK081999 EMBL:AK150296 EMBL:AK150346
EMBL:AK150405 EMBL:AK151066 EMBL:AK153131 EMBL:AK159706
EMBL:BC004842 EMBL:BC034370 EMBL:BC096481 IPI:IPI00132410
RefSeq:NP_080163.1 UniGene:Mm.329123 ProteinModelPortal:Q9CQD1
SMR:Q9CQD1 IntAct:Q9CQD1 STRING:Q9CQD1 PhosphoSite:Q9CQD1
PaxDb:Q9CQD1 PRIDE:Q9CQD1 Ensembl:ENSMUST00000017975 GeneID:271457
KEGG:mmu:271457 InParanoid:Q9CQD1 NextBio:393462 Bgee:Q9CQD1
CleanEx:MM_RAB5A Genevestigator:Q9CQD1
GermOnline:ENSMUSG00000017831 Uniprot:Q9CQD1
Length = 215
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 50/180 (27%), Positives = 84/180 (46%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQG 145
T +G +T + + K+ LLG+ +GK+S V+++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 146 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 205
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 206 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>RGD|2319287 [details] [associations]
symbol:LOC100361891 "RAB5A, member RAS oncogene family-like"
species:10116 "Rattus norvegicus" [GO:0001726 "ruffle"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005525 "GTP binding" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005768 "endosome" evidence=ISO] [GO:0005769
"early endosome" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006184 "GTP catabolic process" evidence=ISO]
[GO:0006897 "endocytosis" evidence=ISO] [GO:0015629 "actin
cytoskeleton" evidence=ISO] [GO:0019001 "guanyl nucleotide binding"
evidence=ISO] [GO:0019003 "GDP binding" evidence=ISO] [GO:0030139
"endocytic vesicle" evidence=ISO] [GO:0045121 "membrane raft"
evidence=ISO] [GO:0045921 "positive regulation of exocytosis"
evidence=ISO] [GO:0051489 "regulation of filopodium assembly"
evidence=ISO] [GO:2000286 "receptor internalization involved in
canonical Wnt receptor signaling pathway" evidence=ISO]
REFSEQ:XM_003751377 Ncbi:XP_003751425
Length = 215
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 50/180 (27%), Positives = 84/180 (46%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQG 145
T +G +T + + K+ LLG+ +GK+S V+++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 146 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 205
+ F IWD G R P+ + A A + ++D+T+ + + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFSRAKNWVKELQRQASPNI 126
Query: 206 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
I L G K D + D Q +A++YA +SA +NVN+IF I KL
Sbjct: 127 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTPMNVNEIFMAIAKKL 181
>UNIPROTKB|Q5ZIP7 [details] [associations]
symbol:RAB5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005769
"early endosome" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0019003 "GDP binding" evidence=IEA] [GO:0030139 "endocytic
vesicle" evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA]
[GO:0045921 "positive regulation of exocytosis" evidence=IEA]
[GO:0051489 "regulation of filopodium assembly" evidence=IEA]
[GO:2000286 "receptor internalization involved in canonical Wnt
receptor signaling pathway" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015629 GO:GO:0015031 GO:GO:0003924
GO:GO:0045121 GO:GO:0030139 GO:GO:0001726 GO:GO:0005769
eggNOG:COG1100 GO:GO:0051489 GO:GO:0019003 GO:GO:0045921
GO:GO:2000286 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00640000091139 CTD:5868 KO:K07887 OrthoDB:EOG4Z0B6M
OMA:EPQNTGA EMBL:AADN02001071 EMBL:AADN02001072 EMBL:AJ720737
IPI:IPI00596261 RefSeq:NP_001006363.1 UniGene:Gga.21473 SMR:Q5ZIP7
STRING:Q5ZIP7 Ensembl:ENSGALT00000018393 GeneID:420649
KEGG:gga:420649 InParanoid:Q5ZIP7 NextBio:20823533 Uniprot:Q5ZIP7
Length = 215
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 50/180 (27%), Positives = 83/180 (46%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQG 145
T +G + + + K+ LLG+ +GK+S V+++V G E G + +T+ +
Sbjct: 7 TRPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 146 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 205
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 206 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
I L G K D + D Q +A+AYA +SA ++NVN+IF I KL
Sbjct: 127 VIALAGNKADLANKRAVDFQ-----EAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>UNIPROTKB|F1MBF6 [details] [associations]
symbol:RAB6A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 GeneTree:ENSGT00600000084341 CTD:5870
KO:K07893 OMA:FKWIDEV EMBL:DAAA02041037 EMBL:DAAA02041038
EMBL:DAAA02041039 EMBL:DAAA02041040 EMBL:DAAA02041041
IPI:IPI00826921 RefSeq:NP_001180044.1 UniGene:Bt.51816 PRIDE:F1MBF6
Ensembl:ENSBTAT00000000027 GeneID:616537 KEGG:bta:616537
NextBio:20900173 Uniprot:F1MBF6
Length = 208
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 47/188 (25%), Positives = 89/188 (47%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGAR 147
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 2 SAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT 61
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIP 206
I +WD G R +P +D+ A + ++D+T+ + W + R + I
Sbjct: 62 IRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVII 121
Query: 207 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 266
+L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 122 MLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPG 176
Query: 267 LPWTVKRN 274
+ T R+
Sbjct: 177 MESTQDRS 184
>UNIPROTKB|J9NYJ8 [details] [associations]
symbol:RAB6A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00600000084341 OMA:FKWIDEV EMBL:AAEX03012812
EMBL:AAEX03012813 Ensembl:ENSCAFT00000046399 Uniprot:J9NYJ8
Length = 208
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 47/188 (25%), Positives = 89/188 (47%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGAR 147
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 2 SAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT 61
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIP 206
I +WD G R +P +D+ A + ++D+T+ + W + R + I
Sbjct: 62 IRLQLWDTAGQERFRSLIPSNIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVII 121
Query: 207 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 266
+L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 122 MLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPG 176
Query: 267 LPWTVKRN 274
+ T R+
Sbjct: 177 MESTQDRS 184
>UNIPROTKB|F1SUT0 [details] [associations]
symbol:RAB6A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 GeneTree:ENSGT00600000084341
OMA:FKWIDEV EMBL:CU915417 EMBL:CU638671 Ensembl:ENSSSCT00000016180
Uniprot:F1SUT0
Length = 208
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 47/188 (25%), Positives = 89/188 (47%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGAR 147
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 2 SAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT 61
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIP 206
I +WD G R +P +D+ A + ++D+T+ + W + R + I
Sbjct: 62 IRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVII 121
Query: 207 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 266
+L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 122 MLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPG 176
Query: 267 LPWTVKRN 274
+ T R+
Sbjct: 177 MESTQDRS 184
>TAIR|locus:2171790 [details] [associations]
symbol:RABA4a "RAB GTPase homolog A4A" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031 EMBL:AB013395
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968
HSSP:P35278 EMBL:AY045947 EMBL:AY079309 EMBL:AY087004
IPI:IPI00520272 RefSeq:NP_201330.1 UniGene:At.9298
ProteinModelPortal:Q9FJN8 SMR:Q9FJN8 STRING:Q9FJN8 PaxDb:Q9FJN8
PRIDE:Q9FJN8 EnsemblPlants:AT5G65270.1 GeneID:836652
KEGG:ath:AT5G65270 TAIR:At5g65270 InParanoid:Q9FJN8 OMA:HGAKGAM
PhylomeDB:Q9FJN8 ProtClustDB:CLSN2685897 Genevestigator:Q9FJN8
Uniprot:Q9FJN8
Length = 226
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 58/200 (29%), Positives = 93/200 (46%)
Query: 87 TFSSGYDTDSDLVS--LKISLLGDCQIGKTSFVVKYVGNEQER-SLQMAGLNLINKTLMV 143
T GY S + K+ L+GD +GK+ + +Y +E S G+ +TL++
Sbjct: 2 TSGGGYGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVI 61
Query: 144 QGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQ 202
+ IWD G R + AV + ++D+T R T + I W E R ++
Sbjct: 62 DHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADK 121
Query: 203 TAIPILIGTKFDDFVRLPPDLQWTIATQ-ARAYAKAMKATLFF--SSATHNINVNKIFKF 259
+ ILIG K D V D Q I T+ A+ +A+ K LFF +SA + NV F
Sbjct: 122 NIVIILIGNK-SDLV----D-QRAIPTEDAKEFAE--KEGLFFLETSAFNATNVESAFST 173
Query: 260 IMAKLFNLPWTVKRNLTIGE 279
++ ++FN+ K++L E
Sbjct: 174 VLTEIFNI--VNKKSLAASE 191
>ZFIN|ZDB-GENE-060929-1062 [details] [associations]
symbol:zgc:154045 "zgc:154045" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-060929-1062 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 KO:K07890 OrthoDB:EOG4W0XF0 EMBL:BC124522
IPI:IPI00803714 RefSeq:NP_001070133.1 UniGene:Dr.107584
ProteinModelPortal:Q08BX0 SMR:Q08BX0 GeneID:767727 KEGG:dre:767727
InParanoid:Q08BX0 NextBio:20918113 Bgee:Q08BX0 Uniprot:Q08BX0
Length = 216
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 43/160 (26%), Positives = 80/160 (50%)
Query: 100 SLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 158
S K+ LLG+ +GKTS V++Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 10 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNITGKRVNLAIWDTAGQ 69
Query: 159 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 217
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 70 ERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 126
Query: 218 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
L + ++ +A YA+++ A + +SA N + ++F
Sbjct: 127 -LEKERHVSVE-EAEGYAESVGAKHYHTSAKLNKGIEELF 164
>UNIPROTKB|F1MPP1 [details] [associations]
symbol:LOC781001 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0019003 "GDP binding" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005768 GO:GO:0003924 GO:GO:0019003 IPI:IPI00697565
OMA:FQKVKSW GeneTree:ENSGT00640000091439 EMBL:DAAA02073306
Ensembl:ENSBTAT00000025807 Uniprot:F1MPP1
Length = 214
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 44/160 (27%), Positives = 80/160 (50%)
Query: 100 SLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 158
S K+ LLG+ +GKTS V+ Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 8 SFKVVLLGEGCVGKTSLVLCYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 67
Query: 159 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 217
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 68 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVD--- 124
Query: 218 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 125 -LEKERHVSIQ-EAESYAESVGAKHYHTSAKQNKGIEELF 162
>UNIPROTKB|E2RHA1 [details] [associations]
symbol:RAB37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030141 "secretory granule" evidence=IEA]
[GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0030141 GO:GO:0005793
GeneTree:ENSGT00700000104031 CTD:326624 KO:K07914 EMBL:AAEX03006308
RefSeq:XP_540417.2 Ensembl:ENSCAFT00000007390 GeneID:483298
KEGG:cfa:483298 OMA:GRQANEP NextBio:20857706 Uniprot:E2RHA1
Length = 223
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 47/148 (31%), Positives = 75/148 (50%)
Query: 71 SPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNE--QERS 128
S A T + E S S YD V+ K+ LLGD +GKT F++++
Sbjct: 5 SGAAATRDGEAPEHSPPCSPSYD-----VTGKVMLLGDSGVGKTCFLIQFKDGAFLSGNF 59
Query: 129 LQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIAC-KDAVAILFMFDLTSRCTL 187
+ G++ NK + V G R+ IWD G R F V A +DA A+L ++D+T++ +
Sbjct: 60 IATVGIDFRNKVVTVDGVRVKLQIWDTAGQER-FRSVTHAYYRDAQALLLLYDITNKSSF 118
Query: 188 NSIVGWYSEARKWNQTAIPI-LIGTKFD 214
++I W +E ++ Q + I L+G K D
Sbjct: 119 DNIRAWLTEIHEYAQRDVVIMLLGNKAD 146
>WB|WBGene00004268 [details] [associations]
symbol:rab-5 species:6239 "Caenorhabditis elegans"
[GO:0006184 "GTP catabolic process" evidence=IEA;IDA] [GO:0003924
"GTPase activity" evidence=IEA;IDA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0007028 "cytoplasm organization"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0008219 "cell
death" evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0009306 "protein secretion" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0006952
"defense response" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008105
"asymmetric protein localization" evidence=IMP] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005769 "early endosome" evidence=IDA] [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0090386 "phagosome maturation involved
in apoptotic cell clearance" evidence=IMP] [GO:0032794 "GTPase
activating protein binding" evidence=IPI] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005938
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0007264 GO:GO:0045335 GO:GO:0006952
GO:GO:0002119 GO:GO:0018996 GO:GO:0003924 GO:GO:0000003
GO:GO:0009306 GO:GO:0000910 GO:GO:0030163 GO:GO:0008105
GO:GO:0005769 eggNOG:COG1100 GO:GO:0090386 GO:GO:0007028 KO:K07976
HOGENOM:HOG000233968 HSSP:P35278 GeneTree:ENSGT00640000091139
EMBL:Z81516 PIR:T21442 RefSeq:NP_492481.1 ProteinModelPortal:P91857
SMR:P91857 IntAct:P91857 STRING:P91857 PaxDb:P91857
EnsemblMetazoa:F26H9.6.1 EnsemblMetazoa:F26H9.6.2 GeneID:172755
KEGG:cel:CELE_F26H9.6 UCSC:F26H9.6.1 CTD:172755 WormBase:F26H9.6
InParanoid:P91857 OMA:RAVDFQV NextBio:876883 Uniprot:P91857
Length = 208
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 51/166 (30%), Positives = 82/166 (49%)
Query: 102 KISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
K+ LLG+ +GK+S V+++V G E G + +T+ + A I F IWD G R
Sbjct: 21 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQER 80
Query: 161 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEA-RKWNQTAIPILIGTKFDDFVRL 219
P+ + A A + ++D+T++ + W E R+ + + L G K D V
Sbjct: 81 YHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKAD--VAN 138
Query: 220 PPDLQWTIATQARAYAKAMKATLFF-SSATHNINVNKIFKFIMAKL 264
+++ +A AYA+ A LF +SA ++NVN IF I KL
Sbjct: 139 KRTVEYE---EANAYAED-NALLFMETSAKTSMNVNDIFMAIAKKL 180
>UNIPROTKB|P91857 [details] [associations]
symbol:rab-5 "Protein RAB-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005938 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0006915 GO:GO:0007264
GO:GO:0045335 GO:GO:0006952 GO:GO:0002119 GO:GO:0018996
GO:GO:0003924 GO:GO:0000003 GO:GO:0009306 GO:GO:0000910
GO:GO:0030163 GO:GO:0008105 GO:GO:0005769 eggNOG:COG1100
GO:GO:0090386 GO:GO:0007028 KO:K07976 HOGENOM:HOG000233968
HSSP:P35278 GeneTree:ENSGT00640000091139 EMBL:Z81516 PIR:T21442
RefSeq:NP_492481.1 ProteinModelPortal:P91857 SMR:P91857
IntAct:P91857 STRING:P91857 PaxDb:P91857 EnsemblMetazoa:F26H9.6.1
EnsemblMetazoa:F26H9.6.2 GeneID:172755 KEGG:cel:CELE_F26H9.6
UCSC:F26H9.6.1 CTD:172755 WormBase:F26H9.6 InParanoid:P91857
OMA:RAVDFQV NextBio:876883 Uniprot:P91857
Length = 208
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 51/166 (30%), Positives = 82/166 (49%)
Query: 102 KISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
K+ LLG+ +GK+S V+++V G E G + +T+ + A I F IWD G R
Sbjct: 21 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQER 80
Query: 161 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEA-RKWNQTAIPILIGTKFDDFVRL 219
P+ + A A + ++D+T++ + W E R+ + + L G K D V
Sbjct: 81 YHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKAD--VAN 138
Query: 220 PPDLQWTIATQARAYAKAMKATLFF-SSATHNINVNKIFKFIMAKL 264
+++ +A AYA+ A LF +SA ++NVN IF I KL
Sbjct: 139 KRTVEYE---EANAYAED-NALLFMETSAKTSMNVNDIFMAIAKKL 180
>ZFIN|ZDB-GENE-041114-161 [details] [associations]
symbol:rab22a "RAB22A, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-041114-161 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
GeneTree:ENSGT00640000091139 OMA:TDTNPPS HSSP:P10114 EMBL:BX323459
EMBL:AY398404 IPI:IPI00486571 UniGene:Dr.143739 SMR:Q6TGV2
STRING:Q6TGV2 Ensembl:ENSDART00000022581 InParanoid:Q6TGV2
Uniprot:Q6TGV2
Length = 196
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 46/169 (27%), Positives = 81/169 (47%)
Query: 98 LVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 156
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 157 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDD 215
G R P+ + + A + ++D+T + ++ W E R+ I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAIAGNKCD- 121
Query: 216 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
D + A+ YA ++ A +SA + IN+N++F I ++
Sbjct: 122 ----LSDAREVSEKDAKDYADSIHAIFIETSAKNAININEVFTQISERI 166
>DICTYBASE|DDB_G0277101 [details] [associations]
symbol:rab11C "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0000331 "contractile vacuole"
evidence=IDA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0277101
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0016020
GO:GO:0015031 GenomeReviews:CM000151_GR GO:GO:0000331
PROSITE:PS51419 EMBL:AAFI02000019 eggNOG:COG1100 KO:K07976
HSSP:Q15907 OMA:GRIHEVV RefSeq:XP_642956.1
ProteinModelPortal:Q550H6 SMR:Q550H6 MINT:MINT-6947891 PRIDE:Q550H6
EnsemblProtists:DDB0229395 GeneID:8620825 KEGG:ddi:DDB_G0277101
Uniprot:Q550H6
Length = 224
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 43/170 (25%), Positives = 90/170 (52%)
Query: 102 KISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
KI ++GD +GK++ + ++ NE E++ G++ K++ + I WD G R
Sbjct: 12 KIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCWDTAGQER 71
Query: 161 SFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFD-DFV 217
F V + AV + ++D+TS+ + ++ W +E R+ Q + +++G K D +
Sbjct: 72 -FRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGNKSDLEMS 130
Query: 218 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
R P +A+A+A++ K + +SA ++ NVN+ F+ ++ +++L
Sbjct: 131 REVP------TKEAQAFAESNKISFLETSALNSTNVNQSFERLLTDIYHL 174
>UNIPROTKB|Q1KME6 [details] [associations]
symbol:RAB6A "Ras-related protein Rab-6A" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0000042 "protein
targeting to Golgi" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0000139 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0000042 HOGENOM:HOG000233968 EMBL:DQ470138 IPI:IPI00571478
RefSeq:NP_001038105.1 UniGene:Gga.186 ProteinModelPortal:Q1KME6
SMR:Q1KME6 PRIDE:Q1KME6 GeneID:419063 KEGG:gga:419063 CTD:5870
KO:K07893 NextBio:20822174 Uniprot:Q1KME6
Length = 208
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 45/178 (25%), Positives = 85/178 (47%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGAR 147
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 2 SAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT 61
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIP 206
I +WD G R +P +D+ A + ++D+T+ + W + R + I
Sbjct: 62 IRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVII 121
Query: 207 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
+L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 122 MLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>UNIPROTKB|P51154 [details] [associations]
symbol:RAB22A "Ras-related protein Rab-22A" species:9615
"Canis lupus familiaris" [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0005769 "early
endosome" evidence=IEA] [GO:0001726 "ruffle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0016023 GO:GO:0010008 GO:GO:0005770
GO:GO:0001726 PROSITE:PS51419 GO:GO:0005769 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:Z22820
PIR:S40208 RefSeq:NP_001003208.1 UniGene:Cfa.45045
ProteinModelPortal:P51154 SMR:P51154 GeneID:403864 KEGG:cfa:403864
CTD:57403 InParanoid:P51154 KO:K07891 OrthoDB:EOG4CRM14
NextBio:20817357 Uniprot:P51154
Length = 194
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 43/161 (26%), Positives = 79/161 (49%)
Query: 98 LVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 156
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 157 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 216
G P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQEAFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 217 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
+ D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 I----DVREVMERDAKDYADSIHAIFVETSAKNAININELF 159
>RGD|1307095 [details] [associations]
symbol:Rab5c "RAB5C, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:1307095 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0005811 GO:GO:0015031
GO:GO:0030100 GO:GO:0030139 GO:GO:0007032 OrthoDB:EOG4Z0B6M
OMA:VDLQESN IPI:IPI00564330 Ensembl:ENSRNOT00000040235
UCSC:RGD:1307095 ArrayExpress:D4ABV4 Uniprot:D4ABV4
Length = 232
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 53/188 (28%), Positives = 84/188 (44%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARI 148
+G + + K+ LLG+ +GK+S V+++V G E G + +T+ + +
Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTV 70
Query: 149 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 207
F IWD G R P+ + A A + ++D+T+ T W E ++ I I
Sbjct: 71 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIA 130
Query: 208 LIGTKFD-------DF----VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKI 256
L G K D +F + PP L T +A+AYA +SA +NVN+I
Sbjct: 131 LAGNKADLASKRAVEFFPCHLPSPPTLFLTSELEAQAYADDNSLLFMETSAKTAMNVNEI 190
Query: 257 FKFIMAKL 264
F I KL
Sbjct: 191 FMAIAKKL 198
>ZFIN|ZDB-GENE-030131-139 [details] [associations]
symbol:rab5aa "RAB5A, member RAS oncogene family,
a" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-030131-139
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P20339
GeneTree:ENSGT00640000091139 KO:K07887 OrthoDB:EOG4Z0B6M
OMA:RAVDFQV EMBL:BX950869 EMBL:BC047803 EMBL:BC063966
IPI:IPI00484834 RefSeq:NP_958893.1 UniGene:Dr.7401 SMR:Q7ZUW5
STRING:Q7ZUW5 Ensembl:ENSDART00000034124 Ensembl:ENSDART00000129730
GeneID:337737 KEGG:dre:337737 CTD:337737 InParanoid:Q7ZUW5
NextBio:20812391 Uniprot:Q7ZUW5
Length = 216
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 50/180 (27%), Positives = 82/180 (45%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQG 145
T +G + + + K+ LLG+ +GK+S V+++V G E G + +TL +
Sbjct: 8 TRPNGSNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDD 67
Query: 146 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 205
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 68 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 127
Query: 206 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
I L G K D + D Q A++YA +SA ++NVN+IF I KL
Sbjct: 128 VIALSGNKADLANKRAVDFQ-----DAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 182
>FB|FBgn0031090 [details] [associations]
symbol:Rab35 "Rab35" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0006911 GO:GO:0005811
GO:GO:0015031 EMBL:AE014298 GO:GO:0000910 HSSP:P07560
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
ChiTaRS:RAB35 FlyBase:FBgn0031090 EMBL:AY094795
RefSeq:NP_001188678.1 RefSeq:NP_608373.1 UniGene:Dm.3622 SMR:Q9W5X0
EnsemblMetazoa:FBtr0070028 EnsemblMetazoa:FBtr0303258
EnsemblMetazoa:FBtr0333549 GeneID:33014 KEGG:dme:Dmel_CG9575
UCSC:CG9575-RA InParanoid:Q9W5X0 GenomeRNAi:33014 NextBio:781524
Uniprot:Q9W5X0
Length = 201
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 42/166 (25%), Positives = 81/166 (48%)
Query: 102 KISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
K+ ++GD +GK+S ++++ + S + G++ +T+ ++G R+ IWD G R
Sbjct: 10 KLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQER 69
Query: 161 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLP 220
+ ++ ++D+T+ + ++ W E + +L+G K DD
Sbjct: 70 FRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDVVKKVLVGNKNDD----- 124
Query: 221 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 266
PD + I A+ +AK M LF +SA NINV +F I ++ +
Sbjct: 125 PDRKVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLD 170
>UNIPROTKB|E1C6J7 [details] [associations]
symbol:RAB17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005622 CTD:64284 KO:K07909 OMA:KLLFMET
GeneTree:ENSGT00640000091139 EMBL:AADN02034487 IPI:IPI00574832
RefSeq:XP_421874.2 UniGene:Gga.8154 Ensembl:ENSGALT00000006196
GeneID:424017 KEGG:gga:424017 NextBio:20826403 Uniprot:E1C6J7
Length = 213
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 48/165 (29%), Positives = 77/165 (46%)
Query: 102 KISLLGDCQIGKTSFVVKYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRS 161
K+ LLG +GK+S +YV N+ + SL G + +T+ ++ A I IWD G +
Sbjct: 21 KMVLLGSTSVGKSSLAYRYVKNDFKESLPTVGCSFFTQTIQLETATIKLEIWDTAGQEKY 80
Query: 162 FDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPI-LIGTKFDDFVRL 219
+ + A A L ++DLT++ TLN W E K + I I L+G K D L
Sbjct: 81 HSVCHLYYRGAHAALLVYDLTNKETLNRAKQWLMELEKEFLPDEIVIALVGNKTD----L 136
Query: 220 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
+ + A +A++ +SA N VN +F + +L
Sbjct: 137 ADERE-VAAEDGEEFARSRSLLFMETSAKSNHQVNDVFMAVAQEL 180
>UNIPROTKB|Q58DS9 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9913 "Bos
taurus" [GO:0019003 "GDP binding" evidence=ISS] [GO:0042470
"melanosome" evidence=IEA] [GO:0031901 "early endosome membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030139 "endocytic vesicle" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0031901 GO:GO:0005811
GO:GO:0015031 GO:GO:0030100 GO:GO:0030139 PROSITE:PS51419
GO:GO:0007032 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 OrthoDB:EOG4Z0B6M
OMA:VDLQESN EMBL:BT021518 EMBL:BC118226 IPI:IPI00694198
RefSeq:NP_001029915.1 UniGene:Bt.5451 ProteinModelPortal:Q58DS9
SMR:Q58DS9 STRING:Q58DS9 PRIDE:Q58DS9 Ensembl:ENSBTAT00000015581
GeneID:613749 KEGG:bta:613749 CTD:5878 InParanoid:Q58DS9 KO:K07889
NextBio:20898747 Uniprot:Q58DS9
Length = 216
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 49/177 (27%), Positives = 81/177 (45%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARI 148
+G + + K+ LLG+ +GK+S V+++V G E G + +T+ + +
Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTV 70
Query: 149 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 207
F IWD G R P+ + A A + ++D+T+ T W E ++ I I
Sbjct: 71 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIA 130
Query: 208 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
L G K D + + Q +A+AYA+ +SA +NVN+IF I KL
Sbjct: 131 LAGNKADLASKRAVEFQ-----EAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>UNIPROTKB|P51148 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0030100 "regulation of endocytosis"
evidence=IEA] [GO:0030139 "endocytic vesicle" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0031901 "early
endosome membrane" evidence=IEA] [GO:0042470 "melanosome"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0019003 "GDP binding" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0006184 "GTP catabolic process"
evidence=TAS] Reactome:REACT_11123 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0031901 GO:GO:0005811
GO:GO:0015031 EMBL:CH471152 GO:GO:0003924 GO:GO:0030100
GO:GO:0030139 PROSITE:PS51419 GO:GO:0007032 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 EMBL:AC105024 EMBL:AC099811
HOGENOM:HOG000233968 OrthoDB:EOG4Z0B6M CTD:5878 KO:K07889
EMBL:U18420 EMBL:U11293 EMBL:AF141304 EMBL:AF498938 EMBL:AK310234
EMBL:CR541901 EMBL:BT019484 EMBL:AC003104 EMBL:BC106039
EMBL:BC114439 IPI:IPI00016339 IPI:IPI01021644 PIR:I38703
RefSeq:NP_001238968.1 RefSeq:NP_004574.2 RefSeq:NP_958842.1
UniGene:Hs.650382 ProteinModelPortal:P51148 SMR:P51148
IntAct:P51148 STRING:P51148 PhosphoSite:P51148 DMDM:38258923
PaxDb:P51148 PeptideAtlas:P51148 PRIDE:P51148 DNASU:5878
Ensembl:ENST00000346213 Ensembl:ENST00000393860
Ensembl:ENST00000547517 Ensembl:ENST00000565751 GeneID:5878
KEGG:hsa:5878 UCSC:uc002hyz.3 GeneCards:GC17M040276 HGNC:HGNC:9785
HPA:HPA003426 MIM:604037 neXtProt:NX_P51148 PharmGKB:PA34145
InParanoid:P51148 PhylomeDB:P51148 GenomeRNAi:5878 NextBio:22840
ArrayExpress:P51148 Bgee:P51148 CleanEx:HS_RAB5C
Genevestigator:P51148 GermOnline:ENSG00000108774 Uniprot:P51148
Length = 216
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 54/193 (27%), Positives = 86/193 (44%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARI 148
+G + + K+ LLG+ +GK+S V+++V G E G + +T+ + +
Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTV 70
Query: 149 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 207
F IWD G R P+ + A A + ++D+T+ T W E ++ I I
Sbjct: 71 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIA 130
Query: 208 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
L G K D + + Q +A+AYA +SA +NVN+IF I KL
Sbjct: 131 LAGNKADLASKRAVEFQ-----EAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL--- 182
Query: 268 PWTVKRNLTIGEP 280
P +N T G P
Sbjct: 183 PKNEPQNAT-GAP 194
>UNIPROTKB|F2Z560 [details] [associations]
symbol:RAB5C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030139 "endocytic vesicle" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0005811 GO:GO:0015031 GO:GO:0030100 GO:GO:0030139
GO:GO:0007032 GeneTree:ENSGT00640000091139 OMA:VDLQESN CTD:5878
KO:K07889 EMBL:CU856598 RefSeq:NP_001231183.1 UniGene:Ssc.19390
UniGene:Ssc.82797 ProteinModelPortal:F2Z560 SMR:F2Z560 PRIDE:F2Z560
Ensembl:ENSSSCT00000018954 GeneID:100523862 KEGG:ssc:100523862
ArrayExpress:F2Z560 Uniprot:F2Z560
Length = 216
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 49/177 (27%), Positives = 81/177 (45%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARI 148
+G + + K+ LLG+ +GK+S V+++V G E G + +T+ + +
Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTV 70
Query: 149 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 207
F IWD G R P+ + A A + ++D+T+ T W E ++ I I
Sbjct: 71 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIA 130
Query: 208 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
L G K D + + Q +A+AYA+ +SA +NVN+IF I KL
Sbjct: 131 LAGNKADLASKRAVEFQ-----EAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>UNIPROTKB|Q5R7L7 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9601
"Pongo abelii" [GO:0019003 "GDP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0031901
GO:GO:0005811 GO:GO:0015031 PROSITE:PS51419 GO:GO:0019003
HOVERGEN:HBG009351 HSSP:P35278 GeneTree:ENSGT00640000091139
OMA:VDLQESN CTD:5878 KO:K07889 EMBL:CR860097 RefSeq:NP_001127529.1
UniGene:Pab.17478 ProteinModelPortal:Q5R7L7 SMR:Q5R7L7 PRIDE:Q5R7L7
Ensembl:ENSPPYT00000009823 GeneID:100174605 KEGG:pon:100174605
InParanoid:Q5R7L7 Uniprot:Q5R7L7
Length = 216
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 54/193 (27%), Positives = 86/193 (44%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARI 148
+G + + K+ LLG+ +GK+S V+++V G E G + +T+ + +
Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTV 70
Query: 149 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 207
F IWD G R P+ + A A + ++D+T+ T W E ++ I I
Sbjct: 71 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIA 130
Query: 208 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
L G K D + + Q +A+AYA +SA +NVN+IF I KL
Sbjct: 131 LAGNKADLASKRAVEFQ-----EAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL--- 182
Query: 268 PWTVKRNLTIGEP 280
P +N T G P
Sbjct: 183 PKNEPQNAT-GAP 194
>TAIR|locus:2831859 [details] [associations]
symbol:RABC2A "RAB GTPase homolog C2A" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005777 "peroxisome" evidence=IDA] [GO:0030742 "GTP-dependent
protein binding" evidence=IPI] [GO:0080115 "myosin XI tail binding"
evidence=IPI] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 EMBL:AL162751 GO:GO:0005777
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 InterPro:IPR025662
PROSITE:PS00675 KO:K07976 HOGENOM:HOG000233968 HSSP:P07560
OMA:FAKRHRT EMBL:D89824 EMBL:AK119027 EMBL:BT006101 IPI:IPI00545141
PIR:T48379 RefSeq:NP_568121.1 UniGene:At.346
ProteinModelPortal:O49841 SMR:O49841 IntAct:O49841 STRING:O49841
PaxDb:O49841 PRIDE:O49841 EnsemblPlants:AT5G03530.1 GeneID:831810
KEGG:ath:AT5G03530 TAIR:At5g03530 InParanoid:O49841
PhylomeDB:O49841 ProtClustDB:PLN03118 Genevestigator:O49841
Uniprot:O49841
Length = 210
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 52/187 (27%), Positives = 84/187 (44%)
Query: 85 SRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMAGLNLINKTLMVQ 144
S + SGYD +S KI L+GD +GK+S +V ++ + E G++ K L V
Sbjct: 3 SSSGQSGYD-----LSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVG 57
Query: 145 GARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVG-WYSEARKW--N 201
G R+ +IWD G R + A I+ ++D+T R T ++V W E + N
Sbjct: 58 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTN 117
Query: 202 QTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIM 261
Q + +L+G K D + + A AK + SA NV + F+ +
Sbjct: 118 QECVRMLVGNKVDR-----ESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELA 172
Query: 262 AKLFNLP 268
K+ +P
Sbjct: 173 LKIMEVP 179
>ZFIN|ZDB-GENE-040122-3 [details] [associations]
symbol:rab5ab "RAB5A, member RAS oncogene family, b"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040122-3 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P20339
GeneTree:ENSGT00640000091139 KO:K07887 OrthoDB:EOG4Z0B6M
OMA:EPQNTGA EMBL:CR848668 EMBL:BC049057 IPI:IPI00511527
RefSeq:NP_957264.1 UniGene:Dr.77063 SMR:Q7ZUG4 STRING:Q7ZUG4
Ensembl:ENSDART00000015694 GeneID:393945 KEGG:dre:393945 CTD:393945
InParanoid:Q7ZUG4 NextBio:20814917 Uniprot:Q7ZUG4
Length = 216
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 50/180 (27%), Positives = 83/180 (46%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQG 145
T +G +T + + K+ LLG+ +GK+S V+++V G E G + +TL +
Sbjct: 8 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDD 67
Query: 146 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 205
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 68 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 127
Query: 206 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
I L G K D + D Q A++YA +SA ++NV++IF I KL
Sbjct: 128 VIALAGNKADLANKRALDFQ-----DAQSYADDNSLLFMETSAKTSMNVSEIFMAIAKKL 182
>ZFIN|ZDB-GENE-040718-428 [details] [associations]
symbol:rab3db "RAB3D, member RAS oncogene family,
b" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040718-428
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 OrthoDB:EOG4TB4C6 EMBL:CU571395
EMBL:BC075784 IPI:IPI00496059 RefSeq:NP_001002679.1
UniGene:Dr.86400 SMR:Q6DI07 Ensembl:ENSDART00000064031
GeneID:436952 KEGG:dre:436952 CTD:436952 InParanoid:Q6DI07
OMA:GHSACAC NextBio:20831379 Uniprot:Q6DI07
Length = 220
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 48/173 (27%), Positives = 87/173 (50%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ ++G+ +GKTSF+ +Y + + + G++ KT+ RI
Sbjct: 18 DQNFDYM-FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNNKRIKLQ 76
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR--KWNQTAIPILI 209
IWD G R + A+ L MFD+T+R + N++ W ++ + W+ + IL+
Sbjct: 77 IWDTAGQERYRTITTAYYRGAMGFLLMFDITNRDSFNAVRDWATQIKTYSWDNAQV-ILV 135
Query: 210 GTKFD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIM 261
G K D + RL P T +Q A+ + F +SA +INV ++F+ ++
Sbjct: 136 GNKCDLEDERLIP----TEDSQRLAHELGFQ--FFEASAKDSINVKQVFECLV 182
>GENEDB_PFALCIPARUM|PF08_0110 [details] [associations]
symbol:rab18 "PfRab18, GTPase" species:5833
"Plasmodium falciparum" [GO:0003924 "GTPase activity" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0003924
EMBL:AL844507 HOGENOM:HOG000233968 KO:K07910
GenomeReviews:AL844507_GR RefSeq:XP_001349449.1 HSSP:P10114
ProteinModelPortal:Q7K6B0 EnsemblProtists:PF08_0110:mRNA
GeneID:2655310 KEGG:pfa:PF08_0110 EuPathDB:PlasmoDB:PF3D7_0807300
OMA:PNISATI ProtClustDB:CLSZ2433229 Uniprot:Q7K6B0
Length = 201
Score = 171 (65.3 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 50/187 (26%), Positives = 92/187 (49%)
Query: 101 LKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 159
LK+ L+GD +GK+S + +Y N+ +E+ L G++ K L + I IWD G
Sbjct: 11 LKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVGIWDTAGQE 70
Query: 160 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW--NQTAIPILIGTKFDDFV 217
R ++A AI+ ++D T R + ++ W +E K+ N+ AI +L+ K D
Sbjct: 71 RFRTLTSAYYRNAHAIILVYDCTVRESFENLDVWINEIDKYSTNKNAIKMLVANKIDK-- 128
Query: 218 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWT-----VK 272
P+ + T + + +A +SA ++IN+ F+ ++ ++ N P V
Sbjct: 129 ---PNHEVT-KDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLLELSIVT 184
Query: 273 RNLTIGE 279
+NL +G+
Sbjct: 185 KNLKLGK 191
>UNIPROTKB|F1NST3 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0007032 "endosome organization"
evidence=IEA] [GO:0030100 "regulation of endocytosis" evidence=IEA]
[GO:0030139 "endocytic vesicle" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0030100 GO:GO:0030139
GO:GO:0007032 GeneTree:ENSGT00640000091139 OMA:VDLQESN
IPI:IPI00600808 EMBL:AADN02068703 EMBL:AADN02068704
Ensembl:ENSGALT00000005312 Ensembl:ENSGALT00000039914
Uniprot:F1NST3
Length = 216
Score = 171 (65.3 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 50/177 (28%), Positives = 78/177 (44%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARI 148
+G + + K+ LLG+ +GKTS V+++V G E G + +T+ + +
Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKTSLVLRFVKGQFPEFQESTIGAAFLTQTVCLDDTTV 70
Query: 149 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 207
F IWD G R P+ + A A + ++D+T+ T W E ++ I I
Sbjct: 71 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIA 130
Query: 208 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
L G K D + D Q A+ YA +SA +NVN+IF I KL
Sbjct: 131 LAGNKADLATKRAVDFQ-----DAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>UNIPROTKB|Q7K6B0 [details] [associations]
symbol:rab18 "PfRab18, GTPase" species:36329 "Plasmodium
falciparum 3D7" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0003924
EMBL:AL844507 HOGENOM:HOG000233968 KO:K07910
GenomeReviews:AL844507_GR RefSeq:XP_001349449.1 HSSP:P10114
ProteinModelPortal:Q7K6B0 EnsemblProtists:PF08_0110:mRNA
GeneID:2655310 KEGG:pfa:PF08_0110 EuPathDB:PlasmoDB:PF3D7_0807300
OMA:PNISATI ProtClustDB:CLSZ2433229 Uniprot:Q7K6B0
Length = 201
Score = 171 (65.3 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 50/187 (26%), Positives = 92/187 (49%)
Query: 101 LKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 159
LK+ L+GD +GK+S + +Y N+ +E+ L G++ K L + I IWD G
Sbjct: 11 LKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVGIWDTAGQE 70
Query: 160 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW--NQTAIPILIGTKFDDFV 217
R ++A AI+ ++D T R + ++ W +E K+ N+ AI +L+ K D
Sbjct: 71 RFRTLTSAYYRNAHAIILVYDCTVRESFENLDVWINEIDKYSTNKNAIKMLVANKIDK-- 128
Query: 218 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWT-----VK 272
P+ + T + + +A +SA ++IN+ F+ ++ ++ N P V
Sbjct: 129 ---PNHEVT-KDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLLELSIVT 184
Query: 273 RNLTIGE 279
+NL +G+
Sbjct: 185 KNLKLGK 191
>TAIR|locus:2024276 [details] [associations]
symbol:RAB11c "RAB GTPase 11C" species:3702 "Arabidopsis
thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005886
"plasma membrane" evidence=ISM;IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0005768 "endosome" evidence=IDA] [GO:0009504 "cell plate"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0019932
"second-messenger-mediated signaling" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0010008 GO:GO:0000910
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0009504 EMBL:AC000132
KO:K07976 HOGENOM:HOG000233968 EMBL:U74669 EMBL:AY045620
EMBL:AY133657 EMBL:AY085684 IPI:IPI00547311 PIR:A86230
RefSeq:NP_172434.1 UniGene:At.20265 ProteinModelPortal:O04486
SMR:O04486 IntAct:O04486 STRING:O04486 PaxDb:O04486 PRIDE:O04486
EnsemblPlants:AT1G09630.1 GeneID:837490 KEGG:ath:AT1G09630
TAIR:At1g09630 InParanoid:O04486 OMA:AKKPCCS PhylomeDB:O04486
ProtClustDB:CLSN2679279 Genevestigator:O04486 GermOnline:AT1G09630
Uniprot:O04486
Length = 217
Score = 171 (65.3 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 49/178 (27%), Positives = 86/178 (48%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQ-ERSLQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+GD +GK++ + ++ NE S G+ +TL V+G +
Sbjct: 6 DEEYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQ 64
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 210
IWD G R + A+ L ++D+T T ++ W E R + I I LIG
Sbjct: 65 IWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIG 124
Query: 211 TKFDDFVRLPPDLQWTIATQ-ARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
K D L +AT+ A++YA+ + +SA +NV K F+ I+++++ +
Sbjct: 125 NK-TDLKHLR-----AVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRI 176
>TAIR|locus:2153202 [details] [associations]
symbol:RHA1 "RAB homolog 1" species:3702 "Arabidopsis
thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005774 "vacuolar
membrane" evidence=IMP] [GO:0007034 "vacuolar transport"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010200 "response to chitin" evidence=RCA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005783 GO:GO:0005774
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
GO:GO:0007034 PROSITE:PS51419 eggNOG:COG1100 EMBL:AB019224
KO:K07976 HOGENOM:HOG000233968 EMBL:X59152 EMBL:Z22958
EMBL:AF389298 EMBL:AY097362 IPI:IPI00532371 PIR:S23727
RefSeq:NP_199326.1 UniGene:At.23631 ProteinModelPortal:P31582
SMR:P31582 IntAct:P31582 STRING:P31582 PaxDb:P31582 PRIDE:P31582
EnsemblPlants:AT5G45130.1 GeneID:834549 KEGG:ath:AT5G45130
TAIR:At5g45130 InParanoid:P31582 OMA:QCCGGGN PhylomeDB:P31582
ProtClustDB:CLSN2685695 Genevestigator:P31582 GermOnline:AT5G45130
Uniprot:P31582
Length = 200
Score = 171 (65.3 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 51/170 (30%), Positives = 81/170 (47%)
Query: 99 VSLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 157
++ K+ LLGD GK+S V+++V ++ E G ++TL V A + F IWD G
Sbjct: 9 INAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68
Query: 158 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFDDF 216
R P+ + A A + +FD+T++ + W E + + N + L G K D
Sbjct: 69 QERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL 128
Query: 217 VRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 264
D + A +A YA+ + +LFF +SA NV IF I +L
Sbjct: 129 -----DARKVSAEEAEIYAQ--ENSLFFMETSAKTATNVKDIFYEIAKRL 171
>WB|WBGene00004285 [details] [associations]
symbol:rab-37 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
KO:K07976 GeneTree:ENSGT00700000104031 EMBL:FO081187
UniGene:Cel.23034 GeneID:180696 KEGG:cel:CELE_W01H2.3 CTD:180696
NextBio:910498 RefSeq:NP_001041294.1 ProteinModelPortal:G5EFA6
SMR:G5EFA6 EnsemblMetazoa:W01H2.3b WormBase:W01H2.3b OMA:KLKYGFV
Uniprot:G5EFA6
Length = 223
Score = 171 (65.3 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 47/190 (24%), Positives = 91/190 (47%)
Query: 85 SRTFSSGYDTD-SDLVSLKISLLGDCQIGKTSFVVKYVGNE--QERSLQMAGLNLINKTL 141
S+ S D D ++L + K+ LLGD GKT +++Y + G++ NK +
Sbjct: 13 SKHRSEMLDLDMAELTTFKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLI 72
Query: 142 MVQGARIAFSIWDVGGDSRSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKW 200
+ ++ IWD G R F V + +DA A+L ++D+ +R + + W S+ +++
Sbjct: 73 TMGDKKVKLQIWDTAGQER-FRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQIKEY 131
Query: 201 NQTAIPI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKF 259
+ A+ + L+G K D +P D + + A+A + +SA NV++ F
Sbjct: 132 GKEAVQVTLVGNKCDLPRAVPTD-------EGKRLAEAYQIPFMETSAKTGFNVDRAFLG 184
Query: 260 IMAKLFNLPW 269
+ ++ L +
Sbjct: 185 LAERMLKLKY 194
>UNIPROTKB|Q3MHP2 [details] [associations]
symbol:RAB11B "Ras-related protein Rab-11B" species:9913
"Bos taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0055037 "recycling endosome" evidence=ISS] [GO:0032402
"melanosome transport" evidence=ISS] [GO:0005525 "GTP binding"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0003924
"GTPase activity" evidence=ISS] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0007049 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7 EMBL:BC105162
IPI:IPI00718152 RefSeq:NP_001030468.1 UniGene:Bt.4347
ProteinModelPortal:Q3MHP2 SMR:Q3MHP2 STRING:Q3MHP2 PRIDE:Q3MHP2
Ensembl:ENSBTAT00000003206 GeneID:532723 KEGG:bta:532723 CTD:9230
InParanoid:Q3MHP2 KO:K07905 OMA:ERSAHDE NextBio:20875786
Uniprot:Q3MHP2
Length = 218
Score = 170 (64.9 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 47/177 (26%), Positives = 83/177 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+GD +GK++ + ++ NE S G+ +++ V G I
Sbjct: 5 DDEYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 210
IWD G R + AV L ++D+ T ++ W E R + I I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 123
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
K D +R L+ +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 124 NKSD--LR---HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>UNIPROTKB|J9JHN1 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101664 CTD:9230 KO:K07905 OMA:ERSAHDE
EMBL:AAEX03012474 EMBL:AAEX03012473 RefSeq:XP_854399.2
ProteinModelPortal:J9JHN1 Ensembl:ENSCAFT00000048184 GeneID:611619
KEGG:cfa:611619 Uniprot:J9JHN1
Length = 218
Score = 170 (64.9 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 47/177 (26%), Positives = 83/177 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+GD +GK++ + ++ NE S G+ +++ V G I
Sbjct: 5 DDEYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 210
IWD G R + AV L ++D+ T ++ W E R + I I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 123
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
K D +R L+ +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 124 NKSD--LR---HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>UNIPROTKB|P51147 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9615
"Canis lupus familiaris" [GO:0019003 "GDP binding" evidence=ISS]
[GO:0042470 "melanosome" evidence=IEA] [GO:0031901 "early endosome
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030139 "endocytic vesicle" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0031901 GO:GO:0005811
GO:GO:0015031 GO:GO:0030100 GO:GO:0030139 PROSITE:PS51419
GO:GO:0007032 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 OrthoDB:EOG4Z0B6M
OMA:VDLQESN CTD:5878 KO:K07889 EMBL:Z27110 PIR:S65933
RefSeq:NP_001003261.1 UniGene:Cfa.3802 ProteinModelPortal:P51147
SMR:P51147 STRING:P51147 PRIDE:P51147 Ensembl:ENSCAFT00000024768
GeneID:403941 KEGG:cfa:403941 InParanoid:P51147 NextBio:20817431
Uniprot:P51147
Length = 216
Score = 170 (64.9 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 49/177 (27%), Positives = 80/177 (45%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARI 148
+G + + K+ LLG+ +GK+S V+++V G E G + +T+ + +
Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTV 70
Query: 149 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 207
F IWD G R P+ + A A + ++D+T+ T W E ++ I I
Sbjct: 71 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIA 130
Query: 208 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
L G K D + + Q +A+AYA +SA +NVN+IF I KL
Sbjct: 131 LAGNKADLASKRAVEFQ-----EAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>UNIPROTKB|P20340 [details] [associations]
symbol:RAB6A "Ras-related protein Rab-6A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000042 "protein targeting to Golgi" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0018125 "peptidyl-cysteine methylation" evidence=IDA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=TAS] [GO:0034067 "protein localization to Golgi apparatus"
evidence=IDA] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0072385 "minus-end-directed organelle transport along
microtubule" evidence=TAS] [GO:0006184 "GTP catabolic process"
evidence=IDA;TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005794
GO:GO:0007264 GO:GO:0000139 GO:GO:0016020 GO:GO:0003924
GO:GO:0031410 GO:GO:0005802 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0006890 GO:GO:0072385 HOVERGEN:HBG009351 EMBL:AP002770
PDB:3CWZ PDBsum:3CWZ GO:GO:0000042 PDB:3BBP PDBsum:3BBP
GO:GO:0018125 HOGENOM:HOG000233968 CTD:5870 KO:K07893 EMBL:M28212
EMBL:AF130986 EMBL:AF119836 EMBL:AF198616 EMBL:AF130122
EMBL:DQ437503 EMBL:AK057157 EMBL:AK289748 EMBL:AK290132
EMBL:AF498939 EMBL:AF498941 EMBL:BT019698 EMBL:AP002993
EMBL:BC003617 EMBL:BC068486 EMBL:BC096818 IPI:IPI00023526
IPI:IPI00217943 PIR:G34323 RefSeq:NP_001230647.1 RefSeq:NP_002860.2
RefSeq:NP_942599.1 UniGene:Hs.503222 UniGene:Hs.591552 PDB:1YZQ
PDB:2GIL PDB:4DKX PDBsum:1YZQ PDBsum:2GIL PDBsum:4DKX
ProteinModelPortal:P20340 SMR:P20340 DIP:DIP-39668N IntAct:P20340
MINT:MINT-1482056 STRING:P20340 PhosphoSite:P20340 DMDM:131796
PaxDb:P20340 PRIDE:P20340 DNASU:5870 Ensembl:ENST00000310653
Ensembl:ENST00000336083 Ensembl:ENST00000393571
Ensembl:ENST00000541588 GeneID:5870 KEGG:hsa:5870 UCSC:uc001oue.3
UCSC:uc001ouf.3 GeneCards:GC11M073386 HGNC:HGNC:9786 HPA:CAB009936
MIM:179513 neXtProt:NX_P20340 PharmGKB:PA34146 InParanoid:P20340
OMA:FKWIDEV PhylomeDB:P20340 ChiTaRS:RAB6A EvolutionaryTrace:P20340
GenomeRNAi:5870 NextBio:22798 ArrayExpress:P20340 Bgee:P20340
CleanEx:HS_RAB6A Genevestigator:P20340 GermOnline:ENSG00000175582
Uniprot:P20340
Length = 208
Score = 170 (64.9 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 45/188 (23%), Positives = 88/188 (46%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGAR 147
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 2 STGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT 61
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIP 206
+ +WD G R +P +D+ + ++D+T+ + W + R + I
Sbjct: 62 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVII 121
Query: 207 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 266
+L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 122 MLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPG 176
Query: 267 LPWTVKRN 274
+ T R+
Sbjct: 177 MESTQDRS 184
>UNIPROTKB|Q15907 [details] [associations]
symbol:RAB11B "Ras-related protein Rab-11B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IDA] [GO:0005525
"GTP binding" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0032402 "melanosome transport" evidence=ISS]
[GO:0055037 "recycling endosome" evidence=ISS] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0006184 "GTP catabolic
process" evidence=IDA;TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0016023
GO:GO:0055037 GO:GO:0007049 EMBL:CH471139 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0019003 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE EMBL:X79780 EMBL:AF498947 EMBL:AK312994 EMBL:BT019536
EMBL:BC110081 IPI:IPI00020436 PIR:JC2487 RefSeq:NP_004209.2
UniGene:Hs.626404 PDB:2F9L PDB:2F9M PDBsum:2F9L PDBsum:2F9M
ProteinModelPortal:Q15907 SMR:Q15907 IntAct:Q15907 STRING:Q15907
PhosphoSite:Q15907 DMDM:38258938 PaxDb:Q15907 PeptideAtlas:Q15907
PRIDE:Q15907 DNASU:9230 Ensembl:ENST00000328024 GeneID:9230
KEGG:hsa:9230 UCSC:uc002mju.4 GeneCards:GC19P008455 HGNC:HGNC:9761
MIM:604198 neXtProt:NX_Q15907 PharmGKB:PA34102 InParanoid:Q15907
PhylomeDB:Q15907 ChiTaRS:RAB11B EvolutionaryTrace:Q15907
GenomeRNAi:9230 NextBio:34597 Bgee:Q15907 CleanEx:HS_RAB11B
Genevestigator:Q15907 GermOnline:ENSG00000185236 Uniprot:Q15907
Length = 218
Score = 170 (64.9 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 47/177 (26%), Positives = 83/177 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+GD +GK++ + ++ NE S G+ +++ V G I
Sbjct: 5 DDEYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 210
IWD G R + AV L ++D+ T ++ W E R + I I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 123
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
K D +R L+ +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 124 NKSD--LR---HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>UNIPROTKB|F2Z5J9 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019003 "GDP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0019003 GeneTree:ENSGT00690000101664 CTD:9230
KO:K07905 OMA:ERSAHDE EMBL:FP090904 RefSeq:NP_001231804.1
UniGene:Ssc.5570 ProteinModelPortal:F2Z5J9 SMR:F2Z5J9 PRIDE:F2Z5J9
Ensembl:ENSSSCT00000014854 GeneID:100513782 KEGG:ssc:100513782
Uniprot:F2Z5J9
Length = 218
Score = 170 (64.9 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 47/177 (26%), Positives = 83/177 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+GD +GK++ + ++ NE S G+ +++ V G I
Sbjct: 5 DDEYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 210
IWD G R + AV L ++D+ T ++ W E R + I I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 123
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
K D +R L+ +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 124 NKSD--LR---HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>UNIPROTKB|Q5RAV6 [details] [associations]
symbol:RAB6A "Ras-related protein Rab-6A" species:9601
"Pongo abelii" [GO:0000042 "protein targeting to Golgi"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0005794 "Golgi
apparatus" evidence=ISS] [GO:0006184 "GTP catabolic process"
evidence=ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0000139 GO:GO:0003924 PROSITE:PS51419 HOVERGEN:HBG009351
GO:GO:0000042 GeneTree:ENSGT00600000084341 CTD:5870 KO:K07893
EMBL:CR858905 RefSeq:NP_001125644.1 UniGene:Pab.18207
ProteinModelPortal:Q5RAV6 SMR:Q5RAV6 PRIDE:Q5RAV6
Ensembl:ENSPPYT00000004357 GeneID:100172563 KEGG:pon:100172563
InParanoid:Q5RAV6 Uniprot:Q5RAV6
Length = 208
Score = 170 (64.9 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 45/188 (23%), Positives = 88/188 (46%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGAR 147
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 2 STGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT 61
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIP 206
+ +WD G R +P +D+ + ++D+T+ + W + R + I
Sbjct: 62 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVII 121
Query: 207 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 266
+L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 122 MLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPG 176
Query: 267 LPWTVKRN 274
+ T R+
Sbjct: 177 MESTQDRS 184
>MGI|MGI:99425 [details] [associations]
symbol:Rab11b "RAB11B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=ISO] [GO:0019003
"GDP binding" evidence=ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:99425 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0003924 GO:GO:0016023
GO:GO:0007049 PROSITE:PS51419 GO:GO:0055038 eggNOG:COG1100
GO:GO:0019003 GO:GO:0032402 HOVERGEN:HBG009351 GO:GO:0033572
HOGENOM:HOG000233968 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE ChiTaRS:RAB11B EMBL:L26528 EMBL:BC054753 EMBL:BC085270
IPI:IPI00135869 PIR:A55005 RefSeq:NP_033023.1 UniGene:Mm.387587
ProteinModelPortal:P46638 SMR:P46638 IntAct:P46638 STRING:P46638
PhosphoSite:P46638 PaxDb:P46638 PRIDE:P46638
Ensembl:ENSMUST00000057373 GeneID:19326 KEGG:mmu:19326
InParanoid:P46638 NextBio:296291 Bgee:P46638 CleanEx:MM_RAB11B
Genevestigator:P46638 GermOnline:ENSMUSG00000002290 GO:GO:2001135
Uniprot:P46638
Length = 218
Score = 170 (64.9 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 47/177 (26%), Positives = 83/177 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+GD +GK++ + ++ NE S G+ +++ V G I
Sbjct: 5 DDEYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 210
IWD G R + AV L ++D+ T ++ W E R + I I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 123
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
K D +R L+ +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 124 NKSD--LR---HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>MGI|MGI:105306 [details] [associations]
symbol:Rab5c "RAB5C, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0005811 "lipid particle" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=TAS] [GO:0006810 "transport" evidence=IEA] [GO:0007032
"endosome organization" evidence=IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0019003 "GDP binding" evidence=ISO] [GO:0030100 "regulation of
endocytosis" evidence=IDA] [GO:0030139 "endocytic vesicle"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105306 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0031901 GO:GO:0015031
GO:GO:0003924 GO:GO:0030100 GO:GO:0030139 PROSITE:PS51419
GO:GO:0007032 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4Z0B6M CTD:5878 KO:K07889
EMBL:BC023027 EMBL:BC027378 EMBL:BC029678 EMBL:M79312
IPI:IPI00224518 PIR:JH0641 RefSeq:NP_077776.2 UniGene:Mm.29829
PDB:1HUQ PDB:1Z07 PDB:1Z0D PDBsum:1HUQ PDBsum:1Z07 PDBsum:1Z0D
ProteinModelPortal:P35278 SMR:P35278 IntAct:P35278 STRING:P35278
PhosphoSite:P35278 PaxDb:P35278 PRIDE:P35278
Ensembl:ENSMUST00000107364 GeneID:19345 KEGG:mmu:19345
EvolutionaryTrace:P35278 NextBio:296361 Bgee:P35278
CleanEx:MM_RAB5C Genevestigator:P35278
GermOnline:ENSMUSG00000019173 Uniprot:P35278
Length = 216
Score = 170 (64.9 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 49/177 (27%), Positives = 80/177 (45%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARI 148
+G + + K+ LLG+ +GK+S V+++V G E G + +T+ + +
Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTV 70
Query: 149 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 207
F IWD G R P+ + A A + ++D+T+ T W E ++ I I
Sbjct: 71 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIA 130
Query: 208 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
L G K D + + Q +A+AYA +SA +NVN+IF I KL
Sbjct: 131 LAGNKADLASKRAVEFQ-----EAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>MGI|MGI:894313 [details] [associations]
symbol:Rab6a "RAB6A, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000042 "protein targeting to
Golgi" evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0001671 "ATPase activator activity" evidence=ISO] [GO:0003924
"GTPase activity" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO;IDA] [GO:0005802 "trans-Golgi
network" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=TAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=ISO] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=ISO] [GO:0019904 "protein
domain specific binding" evidence=ISO] [GO:0031410 "cytoplasmic
vesicle" evidence=ISO] [GO:0032781 "positive regulation of ATPase
activity" evidence=ISO] [GO:0034067 "protein localization to Golgi
apparatus" evidence=ISO] [GO:0051117 "ATPase binding" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:894313
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0000139 GO:GO:0003924 PROSITE:PS51419 GO:GO:0001671
eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0000042 GO:GO:0018125
HOGENOM:HOG000233968 CTD:5870 KO:K07893 OMA:FKWIDEV EMBL:AB041575
EMBL:AK051246 EMBL:AK083262 EMBL:AK084131 EMBL:AK160134
EMBL:AK160866 EMBL:AK169842 EMBL:BC019118 EMBL:BC026915 EMBL:M79313
IPI:IPI00116697 IPI:IPI00230011 PIR:A38883 RefSeq:NP_001157135.1
RefSeq:NP_077249.1 UniGene:Mm.28650 UniGene:Mm.474075
ProteinModelPortal:P35279 SMR:P35279 DIP:DIP-120N IntAct:P35279
STRING:P35279 PhosphoSite:P35279 PaxDb:P35279 PRIDE:P35279
Ensembl:ENSMUST00000032946 Ensembl:ENSMUST00000098252 GeneID:19346
KEGG:mmu:19346 OrthoDB:EOG4NP74D NextBio:296365 Bgee:P35279
CleanEx:MM_RAB6 Genevestigator:P35279 GermOnline:ENSMUSG00000030704
Uniprot:P35279
Length = 208
Score = 170 (64.9 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 45/188 (23%), Positives = 88/188 (46%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGAR 147
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 2 SAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT 61
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIP 206
+ +WD G R +P +D+ + ++D+T+ + W + R + I
Sbjct: 62 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVII 121
Query: 207 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 266
+L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 122 MLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPG 176
Query: 267 LPWTVKRN 274
+ T R+
Sbjct: 177 MESTQDRS 184
>RGD|619737 [details] [associations]
symbol:Rab6a "RAB6A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000042 "protein targeting to Golgi"
evidence=ISO;ISS] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0001671 "ATPase activator activity" evidence=IMP;IDA]
[GO:0003924 "GTPase activity" evidence=ISO;ISS;TAS] [GO:0005525
"GTP binding" evidence=IEA;ISO;ISS;IDA] [GO:0005794 "Golgi
apparatus" evidence=ISO;ISS;IDA] [GO:0005802 "trans-Golgi network"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006184 "GTP
catabolic process" evidence=ISO;ISS;TAS] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=ISO;IDA]
[GO:0018125 "peptidyl-cysteine methylation" evidence=ISO]
[GO:0019904 "protein domain specific binding" evidence=ISO]
[GO:0031410 "cytoplasmic vesicle" evidence=ISO] [GO:0032482 "Rab
protein signal transduction" evidence=IC] [GO:0032781 "positive
regulation of ATPase activity" evidence=IDA] [GO:0034067 "protein
localization to Golgi apparatus" evidence=ISO] [GO:0048193 "Golgi
vesicle transport" evidence=TAS] [GO:0051117 "ATPase binding"
evidence=IPI] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:619737 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0000139 GO:GO:0016020 GO:GO:0003924 PROSITE:PS51419
GO:GO:0001671 eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0000042
HOGENOM:HOG000233968 GO:GO:0032482 GeneTree:ENSGT00600000084341
OMA:FKWIDEV EMBL:AC145474 EMBL:AF148210 IPI:IPI00554034
UniGene:Rn.1695 ProteinModelPortal:Q9WVB1 SMR:Q9WVB1 IntAct:Q9WVB1
STRING:Q9WVB1 PhosphoSite:Q9WVB1 PRIDE:Q9WVB1
Ensembl:ENSRNOT00000025104 UCSC:RGD:619737 ArrayExpress:Q9WVB1
Genevestigator:Q9WVB1 GermOnline:ENSRNOG00000018176 Uniprot:Q9WVB1
Length = 208
Score = 170 (64.9 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 45/188 (23%), Positives = 88/188 (46%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGAR 147
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 2 SAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT 61
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIP 206
+ +WD G R +P +D+ + ++D+T+ + W + R + I
Sbjct: 62 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVII 121
Query: 207 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 266
+L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 122 MLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPG 176
Query: 267 LPWTVKRN 274
+ T R+
Sbjct: 177 MESTQDRS 184
>RGD|68369 [details] [associations]
symbol:Rab11b "RAB11B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=ISO;ISS]
[GO:0005525 "GTP binding" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006184 "GTP
catabolic process" evidence=ISO] [GO:0006928 "cellular component
movement" evidence=NAS] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IDA]
[GO:0019003 "GDP binding" evidence=ISO;ISS] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0032402 "melanosome transport"
evidence=ISS] [GO:0045335 "phagocytic vesicle" evidence=ISO;ISS]
[GO:0055037 "recycling endosome" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:68369 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0006928 GO:GO:0016023 GO:GO:0055037
GO:GO:0007049 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE EMBL:D01046 EMBL:AF286534 EMBL:BC062041 IPI:IPI00210381
RefSeq:NP_116006.1 UniGene:Rn.124832 ProteinModelPortal:O35509
SMR:O35509 IntAct:O35509 STRING:O35509 PhosphoSite:O35509
PRIDE:O35509 Ensembl:ENSRNOT00000010197 GeneID:79434 KEGG:rno:79434
UCSC:RGD:68369 InParanoid:O35509 NextBio:614803
Genevestigator:O35509 GermOnline:ENSRNOG00000007648 Uniprot:O35509
Length = 218
Score = 170 (64.9 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 47/177 (26%), Positives = 83/177 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+GD +GK++ + ++ NE S G+ +++ V G I
Sbjct: 5 DDEYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 210
IWD G R + AV L ++D+ T ++ W E R + I I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 123
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
K D +R L+ +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 124 NKSD--LR---HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>TAIR|locus:2015576 [details] [associations]
symbol:RABA1b "RAB GTPase homolog A1B" species:3702
"Arabidopsis thaliana" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS;IDA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=NAS] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=TAS] [GO:0005773
"vacuole" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005774 GO:GO:0006886
GO:GO:0007264 PROSITE:PS51419 EMBL:AC051629 GO:GO:0042538
eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968 EMBL:L18883
EMBL:BT006406 EMBL:AK227865 EMBL:AY086881 IPI:IPI00537039
PIR:S59942 RefSeq:NP_173136.1 UniGene:At.324
ProteinModelPortal:Q39222 SMR:Q39222 STRING:Q39222 PaxDb:Q39222
PRIDE:Q39222 EnsemblPlants:AT1G16920.1 GeneID:838263
KEGG:ath:AT1G16920 TAIR:At1g16920 InParanoid:Q39222 OMA:QIYRITS
PhylomeDB:Q39222 ProtClustDB:CLSN2914413 Genevestigator:Q39222
GermOnline:AT1G16920 Uniprot:Q39222
Length = 216
Score = 170 (64.9 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 50/193 (25%), Positives = 85/193 (44%)
Query: 90 SGYDTDSDLVSL-KISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGAR 147
+GY + D L K+ L+GD +GK++ + ++ NE S G+ +TL V G
Sbjct: 2 AGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKV 61
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 207
+ IWD G R + AV L ++D+T R T ++ W E + I +
Sbjct: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVV 121
Query: 208 -LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 266
L+G K D +R L ++YA+ +SA NV F ++ +++
Sbjct: 122 MLVGNKSD--LR---HLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYR 176
Query: 267 LPWTVKRNLTIGE 279
+ T K+ + GE
Sbjct: 177 I--TSKKQVEAGE 187
>TAIR|locus:2123010 [details] [associations]
symbol:ARA7 species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS;IDA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005768 "endosome"
evidence=IDA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0010200 "response to chitin" evidence=RCA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005783 GO:GO:0005886
GO:GO:0005774 GO:GO:0007264 GO:GO:0031901 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0015031 GO:GO:0006897
PROSITE:PS51419 EMBL:AL161551 GO:GO:0005769 eggNOG:COG1100
EMBL:AL021768 KO:K07976 HOGENOM:HOG000233968 OMA:VDLQESN
ProtClustDB:CLSN2685695 EMBL:AB038491 EMBL:AF370309 EMBL:AY052670
EMBL:AY063095 IPI:IPI00520138 PIR:T06157 RefSeq:NP_193699.1
UniGene:At.2030 PDB:2EFC PDB:2EFD PDB:2EFE PDB:2EFH PDBsum:2EFC
PDBsum:2EFD PDBsum:2EFE PDBsum:2EFH ProteinModelPortal:Q9SN68
SMR:Q9SN68 IntAct:Q9SN68 STRING:Q9SN68 PaxDb:Q9SN68 PRIDE:Q9SN68
EnsemblPlants:AT4G19640.1 GeneID:827706 KEGG:ath:AT4G19640
TAIR:At4g19640 InParanoid:Q9SN68 PhylomeDB:Q9SN68
EvolutionaryTrace:Q9SN68 Genevestigator:Q9SN68 Uniprot:Q9SN68
Length = 200
Score = 170 (64.9 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 51/170 (30%), Positives = 81/170 (47%)
Query: 99 VSLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 157
++ K+ LLGD GK+S V+++V ++ E G ++TL V A + F IWD G
Sbjct: 9 INAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68
Query: 158 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFDDF 216
R P+ + A A + +FD+T++ + W E + + N + L G K D
Sbjct: 69 QERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLL 128
Query: 217 VRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 264
D + A A+ YA+ + LFF +SA NV +IF I +L
Sbjct: 129 -----DARKVTAEDAQTYAQ--ENGLFFMETSAKTATNVKEIFYEIARRL 171
>ZFIN|ZDB-GENE-040718-293 [details] [associations]
symbol:rab11bb "RAB11B, member RAS oncogene family,
b" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040718-293
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 GeneTree:ENSGT00690000101664 KO:K07905
OMA:ERSAHDE EMBL:AL929146 EMBL:CU469531 EMBL:BC076247
IPI:IPI00489756 RefSeq:NP_001002555.1 RefSeq:XP_003198017.1
RefSeq:XP_003198018.1 UniGene:Dr.84381 SMR:Q6DGU2 STRING:Q6DGU2
Ensembl:ENSDART00000036452 Ensembl:ENSDART00000123392
GeneID:100536606 GeneID:436828 KEGG:dre:100536606 KEGG:dre:436828
CTD:436828 InParanoid:Q6DGU2 NextBio:20831260 Uniprot:Q6DGU2
Length = 218
Score = 170 (64.9 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 47/177 (26%), Positives = 82/177 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+GD +GK++ + ++ NE S G+ +++ V G I
Sbjct: 5 DDEYDFL-FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 210
IWD G R + AV L ++D+ T ++ W E R I I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVG 123
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
K D +R L+ +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 124 NKSD--LR---HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>UNIPROTKB|Q5F3R8 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7
CTD:9230 KO:K07905 OMA:ERSAHDE EMBL:AADN02063526 EMBL:AJ851582
IPI:IPI00573563 RefSeq:NP_001012569.1 UniGene:Gga.1828 SMR:Q5F3R8
STRING:Q5F3R8 Ensembl:ENSGALT00000000866 GeneID:420063
KEGG:gga:420063 InParanoid:Q5F3R8 NextBio:20823028 Uniprot:Q5F3R8
Length = 218
Score = 169 (64.5 bits), Expect = 9.8e-13, P = 9.8e-13
Identities = 47/177 (26%), Positives = 82/177 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+GD +GK++ + ++ NE S G+ +++ V G I
Sbjct: 5 DDEYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 210
IWD G R + AV L ++D+ T ++ W E R I I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVG 123
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
K D +R L+ +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 124 NKSD--LR---HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>UNIPROTKB|Q98932 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0031901 "early endosome membrane"
evidence=IEA] [GO:0019003 "GDP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0031901
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P20339
OrthoDB:EOG4Z0B6M CTD:5878 KO:K07889 EMBL:Y07811 IPI:IPI00600808
RefSeq:NP_989856.1 UniGene:Gga.2500 ProteinModelPortal:Q98932
SMR:Q98932 STRING:Q98932 PRIDE:Q98932 GeneID:395197 KEGG:gga:395197
InParanoid:Q98932 NextBio:20815287 Uniprot:Q98932
Length = 216
Score = 169 (64.5 bits), Expect = 9.8e-13, P = 9.8e-13
Identities = 49/177 (27%), Positives = 78/177 (44%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARI 148
+G + + K+ LLG+ +GK+S V+++V G E G + +T+ + +
Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTV 70
Query: 149 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 207
F IWD G R P+ + A A + ++D+T+ T W E ++ I I
Sbjct: 71 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIA 130
Query: 208 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
L G K D + D Q A+ YA +SA +NVN+IF I KL
Sbjct: 131 LAGNKADLATKRAVDFQ-----DAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>UNIPROTKB|A8MTC6 [details] [associations]
symbol:RAB37 "RAB37, member RAS oncogene family, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:CH471099
HOVERGEN:HBG009351 EMBL:AC016888 EMBL:AC064805 HOGENOM:HOG000233968
UniGene:Hs.351413 HGNC:HGNC:30268 ChiTaRS:RAB37 IPI:IPI00791421
SMR:A8MTC6 STRING:A8MTC6 Ensembl:ENST00000392610 Uniprot:A8MTC6
Length = 189
Score = 169 (64.5 bits), Expect = 9.8e-13, P = 9.8e-13
Identities = 40/122 (32%), Positives = 66/122 (54%)
Query: 97 DLVSLKISLLGDCQIGKTSFVVKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWD 154
DL K+ LLGD +GKT F++++ + G++ NK + V G R+ IWD
Sbjct: 27 DLTG-KVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWD 85
Query: 155 VGGDSRSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTK 212
G R F V A +DA A+L ++D+T++ + ++I W +E ++ Q + I L+G K
Sbjct: 86 TAGQER-FRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144
Query: 213 FD 214
D
Sbjct: 145 AD 146
>UNIPROTKB|Q96AX2 [details] [associations]
symbol:RAB37 "Ras-related protein Rab-37" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0030141
"secretory granule" evidence=IEA] [GO:0005793 "endoplasmic
reticulum-Golgi intermediate compartment" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0030141
EMBL:CH471099 PROSITE:PS51419 GO:GO:0005793 eggNOG:COG1100
HOVERGEN:HBG009351 EMBL:AC016888 EMBL:AC064805 HOGENOM:HOG000233968
EMBL:AK098068 EMBL:AK290202 EMBL:AK296172 EMBL:AK303442
EMBL:BC016615 EMBL:BC040547 IPI:IPI00073180 IPI:IPI00332970
IPI:IPI00798392 RefSeq:NP_001006639.1 RefSeq:NP_001157461.1
RefSeq:NP_001157462.1 RefSeq:NP_783865.1 UniGene:Hs.351413
ProteinModelPortal:Q96AX2 SMR:Q96AX2 IntAct:Q96AX2
MINT:MINT-1485128 STRING:Q96AX2 PhosphoSite:Q96AX2 DMDM:20139581
PaxDb:Q96AX2 PRIDE:Q96AX2 Ensembl:ENST00000392612
Ensembl:ENST00000392613 Ensembl:ENST00000392614
Ensembl:ENST00000402449 Ensembl:ENST00000481224 GeneID:326624
KEGG:hsa:326624 UCSC:uc002jlk.3 UCSC:uc010dfu.3 CTD:326624
GeneCards:GC17P072666 HGNC:HGNC:30268 HPA:HPA051858 MIM:609956
neXtProt:NX_Q96AX2 PharmGKB:PA134901093 KO:K07914 OMA:IHEYAQS
PhylomeDB:Q96AX2 ChiTaRS:RAB37 GenomeRNAi:326624 NextBio:96706
ArrayExpress:Q96AX2 Bgee:Q96AX2 CleanEx:HS_RAB37
Genevestigator:Q96AX2 GermOnline:ENSG00000172794 Uniprot:Q96AX2
Length = 223
Score = 169 (64.5 bits), Expect = 9.8e-13, P = 9.8e-13
Identities = 40/122 (32%), Positives = 66/122 (54%)
Query: 97 DLVSLKISLLGDCQIGKTSFVVKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWD 154
DL K+ LLGD +GKT F++++ + G++ NK + V G R+ IWD
Sbjct: 27 DLTG-KVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWD 85
Query: 155 VGGDSRSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTK 212
G R F V A +DA A+L ++D+T++ + ++I W +E ++ Q + I L+G K
Sbjct: 86 TAGQER-FRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144
Query: 213 FD 214
D
Sbjct: 145 AD 146
>UNIPROTKB|F2Z570 [details] [associations]
symbol:RAB37 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030141 "secretory granule" evidence=IEA] [GO:0005793
"endoplasmic reticulum-Golgi intermediate compartment"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0030141 GO:GO:0005793
GeneTree:ENSGT00700000104031 KO:K07914 EMBL:CU928524 OMA:GRQANEP
RefSeq:XP_003131275.1 Ensembl:ENSSSCT00000018760 GeneID:100513620
KEGG:ssc:100513620 Uniprot:F2Z570
Length = 223
Score = 169 (64.5 bits), Expect = 9.8e-13, P = 9.8e-13
Identities = 40/122 (32%), Positives = 66/122 (54%)
Query: 97 DLVSLKISLLGDCQIGKTSFVVKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWD 154
DL K+ LLGD +GKT F++++ + G++ NK + V G R+ IWD
Sbjct: 27 DLTG-KVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWD 85
Query: 155 VGGDSRSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTK 212
G R F V A +DA A+L ++D+T++ + ++I W +E ++ Q + I L+G K
Sbjct: 86 TAGQER-FRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144
Query: 213 FD 214
D
Sbjct: 145 AD 146
>UNIPROTKB|E1C0Q9 [details] [associations]
symbol:RAB26 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104031 OMA:PSEPRFR
EMBL:AADN02023658 EMBL:AADN02023659 IPI:IPI00820336
ProteinModelPortal:E1C0Q9 Ensembl:ENSGALT00000040425
NextBio:20819995 Uniprot:E1C0Q9
Length = 253
Score = 177 (67.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 48/167 (28%), Positives = 80/167 (47%)
Query: 52 GKQPAVRYQKLTRRSSSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQI 111
G P+ + +PAP+ G R S DL + K+ L+GD +
Sbjct: 13 GSAPSAALPPPAAAAPRSPAPAPELPRNGGATSGRPSLSSSGEFYDL-AFKVMLVGDSGV 71
Query: 112 GKTSFVVKYV-GNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIAC 169
GKT +V++ G S + G++ NK L V G ++ IWD G R F V A
Sbjct: 72 GKTCLLVRFKDGAFLAGSFISTVGIDFRNKVLTVDGVKVKLQIWDTAGQER-FRSVTHAY 130
Query: 170 -KDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFD 214
+DA A+L ++D+T++ + ++I W +E ++ Q + +L+G K D
Sbjct: 131 YRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQQDVVLMLLGNKVD 177
>DICTYBASE|DDB_G0276007 [details] [associations]
symbol:DDB_G0276007 "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0276007 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AAFI02000013
eggNOG:COG1100 RefSeq:XP_001134601.1 ProteinModelPortal:Q1ZXK9
EnsemblProtists:DDB0233191 GeneID:8620262 KEGG:ddi:DDB_G0276007
Uniprot:Q1ZXK9
Length = 212
Score = 168 (64.2 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 53/175 (30%), Positives = 78/175 (44%)
Query: 98 LVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQ-MAGLNLINKTLMVQGARIAFSIWDVG 156
L+ +K L+G GKTS VV+ V + Q G +NKT I +WD
Sbjct: 19 LIPVKCVLIGPTFSGKTSLVVRLVRETFSKESQPTVGAMFLNKTFQFSTHFIKLEVWDTA 78
Query: 157 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFD- 214
G + P+ K + + +FDL+ R + W +E + + AI ILIG K D
Sbjct: 79 GQEKFNSLAPMYFKKSKVAIIVFDLSDRQSFVKAKMWNNEFKTHATEPAIMILIGNKCDL 138
Query: 215 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPW 269
+ L D+ I + ++ T F +SA N NVN IF+ I K+ PW
Sbjct: 139 NKTVLQSDIDDFIREEKE---NSIDFTYFEASAKENTNVNNIFETIAGKI---PW 187
>UNIPROTKB|A8MSP2 [details] [associations]
symbol:RAB37 "cDNA FLJ45130 fis, clone BRAWH3037428, highly
similar to Homo sapiens RAB37, member RAS oncogene family (RAB37),
transcript variant 3, mRNA" species:9606 "Homo sapiens" [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:CH471099 HOVERGEN:HBG009351 EMBL:AC016888 EMBL:AC064805
HOGENOM:HOG000233968 OrthoDB:EOG4VMFG9 UniGene:Hs.351413
HGNC:HGNC:30268 ChiTaRS:RAB37 EMBL:AK127073 IPI:IPI00788648
SMR:A8MSP2 STRING:A8MSP2 Ensembl:ENST00000340415 UCSC:uc002jld.2
Uniprot:A8MSP2
Length = 182
Score = 168 (64.2 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 46/140 (32%), Positives = 74/140 (52%)
Query: 82 VELSR--TFSSGYDTD-SDLVSLKISLLGDCQIGKTSFVVKY-VGNEQERSLQMA-GLNL 136
++L R ++ G D +D V K L+GD +GKTS +V++ G S G+
Sbjct: 1 MDLQRPDSYQGGAGPDFNDHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGF 60
Query: 137 INKTLMVQGARIAFSIWDVGGDSRSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYS 195
NK + V G R+ IWD G R F V A +DA A+L ++D+T++ + ++I W +
Sbjct: 61 TNKVVTVDGVRVKLQIWDTAGQER-FRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLT 119
Query: 196 EARKWNQTAIPI-LIGTKFD 214
E ++ Q + I L+G K D
Sbjct: 120 EIHEYAQRDVVIMLLGNKAD 139
>UNIPROTKB|B7Z3L0 [details] [associations]
symbol:RAB37 "cDNA FLJ61124, highly similar to Ras-related
protein Rab-37" species:9606 "Homo sapiens" [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 EMBL:AC016888 EMBL:AC064805 UniGene:Hs.351413
HGNC:HGNC:30268 ChiTaRS:RAB37 EMBL:AK296062 IPI:IPI00984582
SMR:B7Z3L0 STRING:B7Z3L0 Ensembl:ENST00000528438 Uniprot:B7Z3L0
Length = 196
Score = 168 (64.2 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 38/117 (32%), Positives = 64/117 (54%)
Query: 102 KISLLGDCQIGKTSFVVKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 159
K+ LLGD +GKT F++++ + G++ NK + V G R+ IWD G
Sbjct: 4 KVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQE 63
Query: 160 RSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 214
R F V A +DA A+L ++D+T++ + ++I W +E ++ Q + I L+G K D
Sbjct: 64 R-FRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKAD 119
>TAIR|locus:2169053 [details] [associations]
symbol:RABA5a "RAB GTPase homolog A5A" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005774 "vacuolar membrane"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005774
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
EMBL:AB025628 PROSITE:PS51419 eggNOG:COG1100 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 EMBL:BT004809 EMBL:AK222160
EMBL:AK227772 IPI:IPI00528196 RefSeq:NP_199563.1 UniGene:At.29886
UniGene:At.29887 ProteinModelPortal:Q9FGK5 SMR:Q9FGK5 IntAct:Q9FGK5
PaxDb:Q9FGK5 PRIDE:Q9FGK5 EnsemblPlants:AT5G47520.1 GeneID:834802
KEGG:ath:AT5G47520 TAIR:At5g47520 InParanoid:Q9FGK5 OMA:FARNEFY
PhylomeDB:Q9FGK5 ProtClustDB:CLSN2686382 Genevestigator:Q9FGK5
Uniprot:Q9FGK5
Length = 221
Score = 168 (64.2 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 50/183 (27%), Positives = 88/183 (48%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGA 146
F S D D + KI L+GD +GK++ + ++ +E S G+ + + + G
Sbjct: 3 FYSEDDKSEDYL-FKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGK 61
Query: 147 RIAFSIWDVGGDSRSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQ-TA 204
I IWD G R F V A + AV L ++D++ R T +SI W +E +
Sbjct: 62 EIKAQIWDTAGQER-FRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNV 120
Query: 205 IPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
+ IL+G K D ++ DL+ + +A A+A +SA + NV F+ ++ ++
Sbjct: 121 VTILVGNKSD--LK---DLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEI 175
Query: 265 FNL 267
+N+
Sbjct: 176 YNI 178
>TAIR|locus:2168469 [details] [associations]
symbol:RABA2D "RAB GTPase homolog A2D" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0009504
"cell plate" evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
GO:GO:0005768 GO:GO:0010008 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0009504 EMBL:AB016890 KO:K07976 HOGENOM:HOG000233968
HSSP:P07560 ProtClustDB:PLN03110 EMBL:AF370127 EMBL:AY040051
IPI:IPI00533551 RefSeq:NP_200723.1 UniGene:At.24606
ProteinModelPortal:Q9FIF9 SMR:Q9FIF9 PaxDb:Q9FIF9 PRIDE:Q9FIF9
EnsemblPlants:AT5G59150.1 GeneID:836033 KEGG:ath:AT5G59150
TAIR:At5g59150 InParanoid:Q9FIF9 OMA:VEQDYDY PhylomeDB:Q9FIF9
Genevestigator:Q9FIF9 Uniprot:Q9FIF9
Length = 217
Score = 168 (64.2 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 47/177 (26%), Positives = 83/177 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQ-ERSLQMAGLNLINKTLMVQGARIAFS 151
+ D D + KI L+GD +GKT+ + ++ NE S G+ +TL V+G +
Sbjct: 6 EQDYDYL-FKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-G 210
IWD G R + AV L ++D+T R T ++++ W E R + I I++ G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAG 124
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
K D L+ + A+ + +SA NV K F+ ++A+++++
Sbjct: 125 NKAD-----LNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHI 176
>UNIPROTKB|A6QR46 [details] [associations]
symbol:RAB6B "Ras-related protein Rab-6B" species:9913 "Bos
taurus" [GO:0016023 "cytoplasmic membrane-bounded vesicle"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139
GO:GO:0016192 GO:GO:0015031 GO:GO:0016023 PROSITE:PS51419
eggNOG:COG1100 HOGENOM:HOG000233968 GeneTree:ENSGT00600000084341
OrthoDB:EOG4NP74D EMBL:BC150111 IPI:IPI00690578
RefSeq:NP_001094599.1 UniGene:Bt.65157 ProteinModelPortal:A6QR46
SMR:A6QR46 PRIDE:A6QR46 Ensembl:ENSBTAT00000001199 GeneID:526526
KEGG:bta:526526 CTD:51560 InParanoid:A6QR46 KO:K07894 OMA:ETSKEGM
NextBio:20874388 Uniprot:A6QR46
Length = 208
Score = 167 (63.8 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 42/178 (23%), Positives = 84/178 (47%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGAR 147
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 2 SAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT 61
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIP 206
+ +WD G R +P +D+ + ++D+T+ + W + R + I
Sbjct: 62 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVII 121
Query: 207 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
+L+G K D L Q TI + AK + +SA NV ++F+ + + L
Sbjct: 122 MLVGNKTD----LADKRQITIE-EGEQRAKELSVMFIETSAKTGYNVKQLFRRVASAL 174
>UNIPROTKB|Q9NRW1 [details] [associations]
symbol:RAB6B "Ras-related protein Rab-6B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0016023 "cytoplasmic membrane-bounded
vesicle" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=NAS]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=NAS] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0006184 "GTP catabolic process" evidence=NAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0000139
GO:GO:0015031 EMBL:CH471052 GO:GO:0003924 GO:GO:0016023
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0006890 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4NP74D CTD:51560 KO:K07894
OMA:ETSKEGM EMBL:AF166492 EMBL:AF498940 EMBL:BT007263 EMBL:AK312378
EMBL:BC002510 EMBL:U66623 IPI:IPI00016891 RefSeq:NP_057661.3
UniGene:Hs.707804 PDB:2E9S PDB:2FE4 PDB:2FFQ PDBsum:2E9S
PDBsum:2FE4 PDBsum:2FFQ ProteinModelPortal:Q9NRW1 SMR:Q9NRW1
IntAct:Q9NRW1 STRING:Q9NRW1 PhosphoSite:Q9NRW1 DMDM:13633595
PaxDb:Q9NRW1 PRIDE:Q9NRW1 DNASU:51560 Ensembl:ENST00000285208
Ensembl:ENST00000543906 GeneID:51560 KEGG:hsa:51560 UCSC:uc003epy.3
GeneCards:GC03M133543 HGNC:HGNC:14902 HPA:CAB017713
neXtProt:NX_Q9NRW1 PharmGKB:PA34147 InParanoid:Q9NRW1
PhylomeDB:Q9NRW1 ChiTaRS:RAB6B EvolutionaryTrace:Q9NRW1
GenomeRNAi:51560 NextBio:55358 ArrayExpress:Q9NRW1 Bgee:Q9NRW1
Genevestigator:Q9NRW1 GermOnline:ENSG00000154917 Uniprot:Q9NRW1
Length = 208
Score = 167 (63.8 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 42/178 (23%), Positives = 84/178 (47%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGAR 147
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 2 SAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT 61
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIP 206
+ +WD G R +P +D+ + ++D+T+ + W + R + I
Sbjct: 62 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVII 121
Query: 207 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
+L+G K D L Q TI + AK + +SA NV ++F+ + + L
Sbjct: 122 MLVGNKTD----LADKRQITIE-EGEQRAKELSVMFIETSAKTGYNVKQLFRRVASAL 174
>MGI|MGI:107283 [details] [associations]
symbol:Rab6b "RAB6B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:107283
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139
GO:GO:0016192 GO:GO:0015031 GO:GO:0016023 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
OrthoDB:EOG4NP74D CTD:51560 KO:K07894 OMA:ETSKEGM ChiTaRS:RAB6B
EMBL:AK035893 EMBL:BC060618 IPI:IPI00378145 RefSeq:NP_776142.1
UniGene:Mm.490252 ProteinModelPortal:P61294 SMR:P61294
IntAct:P61294 STRING:P61294 PhosphoSite:P61294 PaxDb:P61294
PRIDE:P61294 Ensembl:ENSMUST00000035155 GeneID:270192
KEGG:mmu:270192 InParanoid:P61294 NextBio:393297 Bgee:P61294
CleanEx:MM_RAB6B Genevestigator:P61294
GermOnline:ENSMUSG00000032549 Uniprot:P61294
Length = 208
Score = 167 (63.8 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 42/178 (23%), Positives = 84/178 (47%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGAR 147
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 2 SAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT 61
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIP 206
+ +WD G R +P +D+ + ++D+T+ + W + R + I
Sbjct: 62 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVII 121
Query: 207 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
+L+G K D L Q TI + AK + +SA NV ++F+ + + L
Sbjct: 122 MLVGNKTD----LADKRQITIE-EGEQRAKELSVMFIETSAKTGYNVKQLFRRVASAL 174
>ZFIN|ZDB-GENE-040426-2849 [details] [associations]
symbol:rab6a "RAB6A, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040426-2849 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00600000084341 EMBL:AL845435 IPI:IPI00817706
Ensembl:ENSDART00000129190 ArrayExpress:E9QIN4 Bgee:E9QIN4
Uniprot:E9QIN4
Length = 208
Score = 167 (63.8 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 44/178 (24%), Positives = 84/178 (47%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGAR 147
S+ D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 2 SAAGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT 61
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIP 206
I +WD G R +P +D+ A + ++D+T+ + W + R + I
Sbjct: 62 IRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVII 121
Query: 207 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
+L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 122 MLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>ZFIN|ZDB-GENE-060825-25 [details] [associations]
symbol:zgc:153788 "zgc:153788" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-060825-25 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 OrthoDB:EOG4WQ13N
KO:K07930 OMA:LIGDCGT EMBL:CR855375 EMBL:BC122421 IPI:IPI00786530
RefSeq:NP_001038812.1 UniGene:Dr.49036 SMR:Q0P3V5
Ensembl:ENSDART00000082517 GeneID:751627 KEGG:dre:751627
InParanoid:Q0P3V5 NextBio:20917779 Uniprot:Q0P3V5
Length = 208
Score = 167 (63.8 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 50/176 (28%), Positives = 84/176 (47%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKY-VGNEQERSLQMAGLNLINKTLMVQGARIAFS 151
D DLV KI L+GD +GKT V ++ G E+ G++ KTL + G R+
Sbjct: 7 DDSYDLV-FKIVLVGDVGVGKTCVVQRFKTGIFIEKQGNTIGVDFTMKTLEIHGKRVKLQ 65
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWN-QTAIPILIG 210
IWD G R + A + +D+T + T S+ W + +K+ +P+LIG
Sbjct: 66 IWDTAGQERFRTITQSYYRSANGAIITYDITKKATFLSVPKWMEDVKKYGGSNIVPLLIG 125
Query: 211 TKFD--DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
K D + +P + T+A Q + A++ +SA + NV++ F + ++L
Sbjct: 126 NKCDLSESREVPLEDAQTMAHQLD-FVSAIE-----TSAKDSSNVDEAFNKMASEL 175
>ZFIN|ZDB-GENE-050809-136 [details] [associations]
symbol:rab6ba "RAB6B, member RAS oncogene family a"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-050809-136 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00600000084341 EMBL:AL935299 IPI:IPI00998642
ProteinModelPortal:F1QKF5 Ensembl:ENSDART00000127126 Bgee:F1QKF5
Uniprot:F1QKF5
Length = 258
Score = 177 (67.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 55/224 (24%), Positives = 104/224 (46%)
Query: 50 SIGKQPAVRYQKL-TRRSSSESS--PAPDTMEAGLVELSRT----FSSGYDTDSDLVSLK 102
S+ P V++ +L T RS++ S P P+ G L++ S G D + L K
Sbjct: 7 SLTADP-VQHSRLQTHRSAAFSIALPHPNIYTGGNTLLNQNKPSNMSVGNDFGNPLRKFK 65
Query: 103 ISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDSRS 161
+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++ + +WD G R
Sbjct: 66 LVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERF 125
Query: 162 FDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFDDFVRLP 220
+P +D+ + ++D+T+ + W + R + I +L+G K D L
Sbjct: 126 RSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNKTD----LA 181
Query: 221 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
Q TI + AK + +SA NV ++F+ + A L
Sbjct: 182 DKRQITIE-EGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAAL 224
>ZFIN|ZDB-GENE-040426-2860 [details] [associations]
symbol:rab11ba "RAB11B, member RAS oncogene
family, a" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040426-2860
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 HSSP:P35278 KO:K07905 EMBL:BC048889
IPI:IPI00509689 RefSeq:NP_999935.1 UniGene:Dr.76644
ProteinModelPortal:Q802D1 SMR:Q802D1 STRING:Q802D1 PRIDE:Q802D1
GeneID:406798 KEGG:dre:406798 CTD:406798 InParanoid:Q802D1
NextBio:20818308 ArrayExpress:Q802D1 Bgee:Q802D1 Uniprot:Q802D1
Length = 218
Score = 166 (63.5 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 46/177 (25%), Positives = 82/177 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFS 151
D + D + ++ L+GD +GK++ + ++ NE S G+ +++ V G I
Sbjct: 5 DDEYDYL-FRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 210
IWD G R + AV L ++D+ T ++ W E R I I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVG 123
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
K D +R L+ +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 124 NKSD--LR---HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>FB|FBgn0005586 [details] [associations]
symbol:Rab3 "Rab3" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS;NAS] [GO:0015031
"protein transport" evidence=IEA;NAS] [GO:0008021 "synaptic
vesicle" evidence=IDA;NAS] [GO:0016192 "vesicle-mediated transport"
evidence=NAS] [GO:0007269 "neurotransmitter secretion"
evidence=NAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0031982 "vesicle" evidence=ISS] [GO:0048786 "presynaptic active
zone" evidence=IDA] [GO:0048790 "maintenance of presynaptic active
zone structure" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
EMBL:AE013599 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0016192 GO:GO:0015031 GO:GO:0030054 GO:GO:0008021
GO:GO:0048786 GO:GO:0006887 PROSITE:PS51419 GO:GO:0007269
eggNOG:COG1100 KO:K07976 GeneTree:ENSGT00690000101942 GO:GO:0048790
EMBL:M64621 EMBL:AB112932 EMBL:AY060449 PIR:JH0425
RefSeq:NP_523687.1 UniGene:Dm.2584 ProteinModelPortal:P25228
SMR:P25228 DIP:DIP-20159N MINT:MINT-946687 STRING:P25228
PaxDb:P25228 PRIDE:P25228 EnsemblMetazoa:FBtr0088257 GeneID:36127
KEGG:dme:Dmel_CG7576 CTD:36127 FlyBase:FBgn0005586
InParanoid:P25228 OMA:RLVDLIC OrthoDB:EOG4TDZ29 PhylomeDB:P25228
ChiTaRS:Rab3 GenomeRNAi:36127 NextBio:796987 Bgee:P25228
GermOnline:CG7576 Uniprot:P25228
Length = 220
Score = 165 (63.1 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 42/169 (24%), Positives = 79/169 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ ++G+ +GKTSF+ +Y + + + G++ KT+ R+
Sbjct: 15 DQNFDYM-FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQ 73
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR--KWNQTAIPILI 209
IWD G R + A+ + M+D+T+ + NS+ W ++ + W+ + IL+
Sbjct: 74 IWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQV-ILV 132
Query: 210 GTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 258
G K D D + + R A + F +SA N+NV +F+
Sbjct: 133 GNKCD-----MEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFE 176
>TAIR|locus:2024992 [details] [associations]
symbol:RABA2b "RAB GTPase homolog A2B" species:3702
"Arabidopsis thaliana" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005768 "endosome"
evidence=IDA] [GO:0009504 "cell plate" evidence=IDA] [GO:0006457
"protein folding" evidence=RCA] [GO:0009408 "response to heat"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] [GO:0042542 "response to hydrogen peroxide"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0010008 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0009504 EMBL:AC022464 KO:K07976
IPI:IPI00522346 PIR:A86209 RefSeq:NP_172221.1 UniGene:At.51514
HSSP:P07560 ProteinModelPortal:Q9LNW1 SMR:Q9LNW1 PaxDb:Q9LNW1
PRIDE:Q9LNW1 EnsemblPlants:AT1G07410.1 GeneID:837253
KEGG:ath:AT1G07410 TAIR:At1g07410 InParanoid:Q9LNW1 OMA:QVDNKTV
Genevestigator:Q9LNW1 Uniprot:Q9LNW1
Length = 214
Score = 165 (63.1 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 47/178 (26%), Positives = 85/178 (47%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQ-ERSLQMAGLNLINKTLMVQGARIAFS 151
D + D + KI L+GD +GK++ + ++ NE S G+ +TL V+G +
Sbjct: 6 DHEYDYL-FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-G 210
IWD G R + AV L ++D+T R T +++ W E R + I I++ G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAG 124
Query: 211 TKFD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
K D + +R D R+ A+ + +SA N+ K F+ I+++++++
Sbjct: 125 NKSDLNHLRSVAD------EDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHI 176
>TAIR|locus:2140045 [details] [associations]
symbol:RABH1c "RAB GTPase homolog H1C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0006984 "ER-nucleus signaling
pathway" evidence=RCA] [GO:0009697 "salicylic acid biosynthetic
process" evidence=RCA] [GO:0009738 "abscisic acid mediated
signaling pathway" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0045087
"innate immune response" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0007264 GO:GO:0000139 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016192 GO:GO:0015031 PROSITE:PS51419 EMBL:AL161596
eggNOG:COG1100 EMBL:AL035708 KO:K07976 HOGENOM:HOG000233968
HSSP:P20340 EMBL:AF325109 EMBL:AF386952 EMBL:BT000043
IPI:IPI00539855 PIR:T06095 RefSeq:NP_195699.1 UniGene:At.2863
ProteinModelPortal:Q9SMR4 SMR:Q9SMR4 STRING:Q9SMR4 PaxDb:Q9SMR4
PRIDE:Q9SMR4 EnsemblPlants:AT4G39890.1 GeneID:830148
KEGG:ath:AT4G39890 TAIR:At4g39890 InParanoid:Q9SMR4 OMA:PEGMIDI
PhylomeDB:Q9SMR4 ProtClustDB:CLSN2916092 Genevestigator:Q9SMR4
Uniprot:Q9SMR4
Length = 214
Score = 165 (63.1 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 43/172 (25%), Positives = 84/172 (48%)
Query: 96 SDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWD 154
S L K+ LGD +GKTS + +++ ++ + + Q G++ ++KT+ ++ + +WD
Sbjct: 5 SPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWD 64
Query: 155 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEA-RKWNQT-AIPILIGTK 212
G R +P +D+ + ++D+++R T + W + R+ Q+ I +L+G K
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNK 124
Query: 213 FDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
D L Q +I+ + K +SA N N+ +F+ I A L
Sbjct: 125 TD----LVEKRQVSIS-EGEDKGKEYGVMFIETSAKENFNIKALFRKIAAAL 171
>ZFIN|ZDB-GENE-050208-660 [details] [associations]
symbol:rab3b "RAB3B, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-050208-660 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101942 EMBL:CR381682 IPI:IPI00482747
Ensembl:ENSDART00000062820 Uniprot:F1QCC8
Length = 218
Score = 165 (63.1 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 44/172 (25%), Positives = 83/172 (48%)
Query: 91 GYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIA 149
G D + D + K+ ++G+ +GKTSF+ +Y + S + G++ KT+ R+
Sbjct: 14 GSDQNFDYM-FKLLIIGNSSVGKTSFLFRYADDSFSSSFVSTVGIDFKVKTVYRNDKRVK 72
Query: 150 FSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR--KWNQTAIPI 207
IWD G R + A+ + M+D+T+ + N++ W ++ + W+ + I
Sbjct: 73 LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESYNAVQDWATQIKTYSWDNAQV-I 131
Query: 208 LIGTKFD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 258
L+G K D D R+ P + + A + + +SA NINV ++F+
Sbjct: 132 LVGNKCDMDEERVVP------FEKGKHLADQLGFEYYEASAKENINVRQVFE 177
>ZFIN|ZDB-GENE-050320-28 [details] [associations]
symbol:rab6bb "RAB6B, member RAS oncogene family b"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-050320-28 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00600000084341 OrthoDB:EOG4NP74D OMA:PEGMIDI
EMBL:BX649390 EMBL:BC091529 IPI:IPI00503279 RefSeq:NP_001013485.1
UniGene:Dr.28607 SMR:Q5BJD1 Ensembl:ENSDART00000042255
GeneID:541339 KEGG:dre:541339 InParanoid:Q5BJD1 NextBio:20879155
Uniprot:Q5BJD1
Length = 208
Score = 165 (63.1 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 43/178 (24%), Positives = 83/178 (46%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGAR 147
S G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 2 SMGSDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT 61
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIP 206
+ +WD G R +P +D+ + ++D+T+ + W + R + I
Sbjct: 62 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNINSFQLTSKWIDDVRTERGSDVII 121
Query: 207 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
+L+G K D L Q TI + AK + +SA NV ++F+ + A L
Sbjct: 122 MLVGNKTD----LEEKRQITIE-EGEQRAKELNVMFIETSAKTGSNVKQLFRRVAAAL 174
>DICTYBASE|DDB_G0269238 [details] [associations]
symbol:rab11A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0034394 "protein localization to
cell surface" evidence=IMP] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000331 "contractile vacuole" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0031164 "contractile
vacuolar membrane" evidence=IEA;IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA;IDA] [GO:0007231
"osmosensory signaling pathway" evidence=IMP] [GO:0005525 "GTP
binding" evidence=IEA;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA;IDA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005773 "vacuole" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0269238 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0045335 GO:GO:0015031
PROSITE:PS51419 GO:GO:0007231 GO:GO:0031164 GO:GO:0034394
eggNOG:COG1100 KO:K07976 OMA:AMGTRDD EMBL:U02925 RefSeq:XP_646557.1
ProteinModelPortal:P36412 SMR:P36412 MINT:MINT-6947977
STRING:P36412 PRIDE:P36412 EnsemblProtists:DDB0191190
GeneID:8617525 KEGG:ddi:DDB_G0269238 ProtClustDB:CLSZ2431439
Uniprot:P36412
Length = 214
Score = 164 (62.8 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 46/181 (25%), Positives = 85/181 (46%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGAR 147
S G + D + KI L+GD +GK++ + ++ NE + G+ +T+ +G
Sbjct: 3 SKGSQEEYDYL-YKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKT 61
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 207
I +WD G R + AV L ++D+ + T S+ W E R+ I I
Sbjct: 62 IKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEI 121
Query: 208 -LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 266
L+G K D +R L+ +A+ +++ K T +SA + NV F+ I+ ++++
Sbjct: 122 MLVGNKSD--LR---HLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYH 176
Query: 267 L 267
+
Sbjct: 177 I 177
>UNIPROTKB|E2R5A5 [details] [associations]
symbol:RAB31 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 CTD:11031 KO:K07892
OMA:SKQIPPL GeneTree:ENSGT00640000091139 EMBL:AAEX03005508
RefSeq:XP_850610.2 ProteinModelPortal:E2R5A5
Ensembl:ENSCAFT00000029725 GeneID:608485 KEGG:cfa:608485
NextBio:20894132 Uniprot:E2R5A5
Length = 195
Score = 164 (62.8 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 42/166 (25%), Positives = 84/166 (50%)
Query: 101 LKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDS 159
LK+ LLGD +GK+S V ++V + + ++ G + + KT+ F IWD G
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 160 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDFVR 218
R P+ + + A + ++D+T + + +++ W E ++ I + I G K D
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCD---- 122
Query: 219 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
D++ A+ YA+++ A + +SA + IN+ ++F+ I ++
Sbjct: 123 -LSDIREVPLKDAKEYAESIGAVVVETSAKNAINIEELFQGISRQI 167
>POMBASE|SPAC6F6.15 [details] [associations]
symbol:ypt5 "GTPase Ypt5" species:4896
"Schizosaccharomyces pombe" [GO:0003924 "GTPase activity"
evidence=ISO] [GO:0005525 "GTP binding" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005770 "late endosome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006897 "endocytosis" evidence=ISO] [GO:0006995
"cellular response to nitrogen starvation" evidence=IMP]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IC] [GO:0031338 "regulation of vesicle fusion"
evidence=IMP] [GO:0033157 "regulation of intracellular protein
transport" evidence=IC] [GO:0070314 "G1 to G0 transition"
evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
PomBase:SPAC6F6.15 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0007264 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0005770 PROSITE:PS51419 GO:GO:0006995 eggNOG:COG1100
GO:GO:0070314 KO:K07976 GO:GO:0033157 HOGENOM:HOG000233968
OMA:GTQGKIC GO:GO:0031338 OrthoDB:EOG4S1XHJ EMBL:Z22220 PIR:A47733
PIR:S34729 RefSeq:NP_593907.1 ProteinModelPortal:P36586 SMR:P36586
STRING:P36586 PRIDE:P36586 EnsemblFungi:SPAC6F6.15.1 GeneID:2542248
KEGG:spo:SPAC6F6.15 NextBio:20803313 Uniprot:P36586
Length = 211
Score = 164 (62.8 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 46/169 (27%), Positives = 78/169 (46%)
Query: 99 VSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMV-QGARIAFSIWDVG 156
++ K+ LLGD +GK+S V+++V ++ + + G + +TL + + + IWD
Sbjct: 13 INQKLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTA 72
Query: 157 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDD 215
G R P+ ++A + ++D+T +L W E ++ I I L G K D
Sbjct: 73 GQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLD- 131
Query: 216 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
L + + A AYA F +SA NVN++F I KL
Sbjct: 132 ---LAQERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKL 177
>WB|WBGene00004277 [details] [associations]
symbol:rab-18 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0009792 GO:GO:0007264 GO:GO:0015031
GO:GO:0042127 GO:GO:0007281 PROSITE:PS51419 GO:GO:0040020
eggNOG:COG1100 InterPro:IPR025662 GO:GO:0040022
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 KO:K07910
EMBL:FO080242 RefSeq:NP_741092.1 RefSeq:NP_741093.2
ProteinModelPortal:Q8MXS1 SMR:Q8MXS1 PaxDb:Q8MXS1 PRIDE:Q8MXS1
EnsemblMetazoa:Y92C3B.3b GeneID:175272 KEGG:cel:CELE_Y92C3B.3
UCSC:Y92C3B.3b CTD:175272 WormBase:Y92C3B.3a WormBase:Y92C3B.3b
InParanoid:Q8MXS1 OMA:FAKRHRT NextBio:887480 Uniprot:Q8MXS1
Length = 203
Score = 164 (62.8 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 48/196 (24%), Positives = 96/196 (48%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGN--EQERSLQMAGLNLINKTLMVQGARIAF 150
D+ S L +LKI ++G+ +GK+S ++++V + + E++ + G++ ++ + G R+
Sbjct: 4 DSSSPLTTLKILIIGESGVGKSSLMLRFVDDVFDPEQAATI-GVDFRVTSMAIDGNRVKL 62
Query: 151 SIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW--NQTAIPIL 208
+IWD G R P + A ++ ++D+TSR + + W E + N I ++
Sbjct: 63 AIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMM 122
Query: 209 IGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFF-SSATHNINVNKIFKFIMAKLFNL 267
+ K D +P + + +AK + TLF +SA V F+ ++ K+
Sbjct: 123 VANKID----MPNRV--VTREEGLKFAKRHR-TLFIEASAKTKEGVQCTFEELIEKIIQT 175
Query: 268 P--WTVKR-NLTIGEP 280
P W R + +G+P
Sbjct: 176 PDLWDNDRPSFRLGQP 191
>DICTYBASE|DDB_G0286553 [details] [associations]
symbol:rab21 "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0043229 "intracellular organelle"
evidence=IDA] [GO:0005622 "intracellular" evidence=IDA] [GO:0006907
"pinocytosis" evidence=IMP] [GO:0050766 "positive regulation of
phagocytosis" evidence=IGI;IMP] [GO:0046847 "filopodium assembly"
evidence=IMP] [GO:0030866 "cortical actin cytoskeleton
organization" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006909 "phagocytosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0286553 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GenomeReviews:CM000153_GR GO:GO:0030866 GO:GO:0015031 GO:GO:0006909
EMBL:AAFI02000089 GO:GO:0050766 PROSITE:PS51419 GO:GO:0046847
eggNOG:COG1100 KO:K07890 EMBL:L21012 RefSeq:XP_637605.1
ProteinModelPortal:P34142 SMR:P34142 IntAct:P34142 STRING:P34142
PRIDE:P34142 EnsemblProtists:DDB0191253 GeneID:8625745
KEGG:ddi:DDB_G0286553 OMA:FQKVKSW Uniprot:P34142
Length = 212
Score = 163 (62.4 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 48/167 (28%), Positives = 78/167 (46%)
Query: 94 TDSDLVSLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSI 152
TD++ S K+ LLG+ +GKTS V +Y+ N ++ L K + + G RI +I
Sbjct: 2 TDTEK-SFKVVLLGEGCVGKTSIVFRYIDNIFNDKHLMTQHAGFFQKHINIGGKRICLTI 60
Query: 153 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGT 211
WD G R PI + + L ++D+T + W E + I + +IG
Sbjct: 61 WDTAGQERFHALGPIYYRGSQGALVVYDITDNDSFIKAKNWIKELKTMLGNDISLCIIGN 120
Query: 212 KFD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
K D + R+ P A AYAK++ A + +SA N + ++F
Sbjct: 121 KCDLEKTRVIP------LADAEAYAKSVGAIHYSTSAKLNKGIEELF 161
>FB|FBgn0015797 [details] [associations]
symbol:Rab6 "Rab6" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0001745 "compound
eye morphogenesis" evidence=IGI] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0007293 "germarium-derived egg chamber formation" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008103 "oocyte
microtubule cytoskeleton polarization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0006887
"exocytosis" evidence=IMP] [GO:0031982 "vesicle" evidence=ISS]
[GO:0045467 "R7 cell development" evidence=IMP] [GO:0060078
"regulation of postsynaptic membrane potential" evidence=IMP]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0016023 "cytoplasmic membrane-bounded
vesicle" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007411 GO:GO:0008103
GO:GO:0007264 EMBL:AE014134 GO:GO:0015031 GO:GO:0045467
GO:GO:0003924 GO:GO:0006887 eggNOG:COG1100 GO:GO:0007293
GO:GO:0045451 KO:K07976 GO:GO:0060078 GeneTree:ENSGT00600000084341
OMA:TTKWIED EMBL:AY060261 EMBL:D84314 RefSeq:NP_477172.1
UniGene:Dm.4067 PDB:2Y8E PDBsum:2Y8E SMR:O18334 MINT:MINT-828566
STRING:O18334 EnsemblMetazoa:FBtr0080361 GeneID:34636
KEGG:dme:Dmel_CG6601 UCSC:CG6601-RA CTD:34636 FlyBase:FBgn0015797
InParanoid:O18334 OrthoDB:EOG45X6C4 EvolutionaryTrace:O18334
GenomeRNAi:34636 NextBio:789437 Uniprot:O18334
Length = 208
Score = 163 (62.4 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 41/178 (23%), Positives = 83/178 (46%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGAR 147
SSG D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 2 SSG-DFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT 60
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIP 206
+ +WD G R +P +D+ + ++D+T+ + + W + R + I
Sbjct: 61 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVII 120
Query: 207 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
+L+G K D D + + AK + +SA NV ++F+ + A L
Sbjct: 121 MLVGNKTD-----LSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 173
>UNIPROTKB|E1BTI1 [details] [associations]
symbol:RAB31 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 OMA:SKQIPPL GeneTree:ENSGT00640000091139
EMBL:AADN02052698 EMBL:AADN02052699 EMBL:AADN02052700
EMBL:AADN02052701 EMBL:AADN02052702 EMBL:AADN02052703
EMBL:AADN02052704 EMBL:AADN02052705 IPI:IPI00592658
Ensembl:ENSGALT00000033559 NextBio:20830561 Uniprot:E1BTI1
Length = 194
Score = 163 (62.4 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 41/170 (24%), Positives = 86/170 (50%)
Query: 97 DLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDV 155
++ LK+ LLGD +GK+S V ++V + + ++ G + + KT+ F IWD
Sbjct: 2 EIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDT 61
Query: 156 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFD 214
G R P+ + + A + ++D+T + + +++ W E ++ I + I G K D
Sbjct: 62 AGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCD 121
Query: 215 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
D++ A+ YA+++ A + +SA + +N+ ++F+ I ++
Sbjct: 122 -----LSDIREVPMKDAKEYAESIGAIVVETSAKNAVNIEELFQGISQQI 166
>UNIPROTKB|Q5ZHW4 [details] [associations]
symbol:RAB5B "Ras-related protein Rab-5B" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0031901 "early endosome membrane"
evidence=IEA] [GO:0019003 "GDP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0031901
GO:GO:0015031 PROSITE:PS51419 GO:GO:0019003 HOVERGEN:HBG009351
HSSP:P20339 EMBL:AJ721020 IPI:IPI00586484 RefSeq:NP_001186777.1
UniGene:Gga.17824 ProteinModelPortal:Q5ZHW4 SMR:Q5ZHW4 PRIDE:Q5ZHW4
GeneID:100529061 KEGG:gga:100529061 CTD:5869 KO:K07888
Uniprot:Q5ZHW4
Length = 215
Score = 163 (62.4 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 47/177 (26%), Positives = 81/177 (45%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARI 148
+G S + K+ LLG+ +GK+S V+++V G E G + +++ + +
Sbjct: 10 NGQSQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTV 69
Query: 149 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 207
F IWD G R P+ + A A + ++D+T++ T W E ++ +I I
Sbjct: 70 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIA 129
Query: 208 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
L G K D + + + +A+AYA +SA +NVN +F I KL
Sbjct: 130 LAGNKADLASKRMVEYE-----EAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>UNIPROTKB|Q5ZJN2 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0055038 "recycling endosome membrane"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0072659 "protein localization to plasma
membrane" evidence=IEA] [GO:0032154 "cleavage furrow" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0007049 GO:GO:0000910 GO:GO:0005802 GO:GO:0072659
PROSITE:PS51419 GO:GO:0032154 GO:GO:0055038 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7
EMBL:AJ720402 IPI:IPI00585570 RefSeq:NP_001005827.1
UniGene:Gga.5322 ProteinModelPortal:Q5ZJN2 SMR:Q5ZJN2 STRING:Q5ZJN2
PRIDE:Q5ZJN2 Ensembl:ENSGALT00000012312 GeneID:415544
KEGG:gga:415544 InParanoid:Q5ZJN2 NextBio:20819128 Uniprot:Q5ZJN2
Length = 216
Score = 163 (62.4 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 46/177 (25%), Positives = 82/177 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+GD +GK++ + ++ NE S G+ +++ V G I
Sbjct: 5 DDEYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 210
IWD G R + AV L ++D+ T ++ W E R + I I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 123
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
K D +R L+ +ARA+A+ + +SA + NV F+ I+ +++ +
Sbjct: 124 NKSD--LR---HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
>UNIPROTKB|E1BLD5 [details] [associations]
symbol:RAB37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030141 "secretory granule" evidence=IEA] [GO:0005793
"endoplasmic reticulum-Golgi intermediate compartment"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0030141 GO:GO:0005793
GeneTree:ENSGT00700000104031 OMA:IHEYAQS EMBL:DAAA02049538
EMBL:DAAA02049539 EMBL:DAAA02049540 EMBL:DAAA02049541
EMBL:DAAA02049542 EMBL:DAAA02049543 EMBL:DAAA02049544
EMBL:DAAA02049545 EMBL:DAAA02049546 EMBL:DAAA02049547
EMBL:DAAA02049548 EMBL:DAAA02049549 EMBL:DAAA02049550
EMBL:DAAA02049551 EMBL:DAAA02049552 EMBL:DAAA02049553
EMBL:DAAA02049554 EMBL:DAAA02049555 EMBL:DAAA02049556
IPI:IPI00689178 UniGene:Bt.103470 ProteinModelPortal:E1BLD5
Ensembl:ENSBTAT00000010645 NextBio:20898856 Uniprot:E1BLD5
Length = 216
Score = 163 (62.4 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 45/140 (32%), Positives = 73/140 (52%)
Query: 82 VELSR--TFSSGYDTD-SDLVSLKISLLGDCQIGKTSFVVKY-VGNEQERSLQMA-GLNL 136
++L R ++ G D + V K L+GD +GKTS +V++ G S G+
Sbjct: 1 MDLQRLDSYQGGAGPDFHEHVLHKTILVGDSGVGKTSLLVQFDQGKFVPGSFSATVGIGF 60
Query: 137 INKTLMVQGARIAFSIWDVGGDSRSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYS 195
NK + V G R+ IWD G R F V A +DA A+L ++D+T++ + ++I W +
Sbjct: 61 TNKVVTVDGVRVKLQIWDTAGQER-FRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLT 119
Query: 196 EARKWNQTAIPI-LIGTKFD 214
E ++ Q + I L+G K D
Sbjct: 120 EIHEYAQRDVVIMLLGNKAD 139
>UNIPROTKB|F2Z4D5 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9913
"Bos taurus" [GO:0072659 "protein localization to plasma membrane"
evidence=IEA] [GO:0055037 "recycling endosome" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0032154 "cleavage
furrow" evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0000910 GO:GO:0005802 GO:GO:0072659
GO:GO:0031175 GO:GO:0032154 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 IPI:IPI00695221 UniGene:Bt.44630
EMBL:DAAA02027871 ProteinModelPortal:F2Z4D5 SMR:F2Z4D5 PRIDE:F2Z4D5
Ensembl:ENSBTAT00000025235 Uniprot:F2Z4D5
Length = 216
Score = 163 (62.4 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 46/177 (25%), Positives = 82/177 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+GD +GK++ + ++ NE S G+ +++ V G I
Sbjct: 5 DDEYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 210
IWD G R + AV L ++D+ T ++ W E R + I I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 123
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
K D +R L+ +ARA+A+ + +SA + NV F+ I+ +++ +
Sbjct: 124 NKSD--LR---HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
>UNIPROTKB|P62490 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9615
"Canis lupus familiaris" [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0032402 "melanosome transport" evidence=ISS] [GO:0072659
"protein localization to plasma membrane" evidence=ISS] [GO:0031175
"neuron projection development" evidence=ISS] [GO:0032154 "cleavage
furrow" evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0055038 "recycling endosome membrane" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0007049 GO:GO:0000910 GO:GO:0005802
GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175 GO:GO:0032154
GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:AMGTRDD GeneTree:ENSGT00690000101664
CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7 EMBL:X56388 PIR:E36364
RefSeq:NP_001003276.1 UniGene:Cfa.3814 UniGene:Cfa.45017
ProteinModelPortal:P62490 SMR:P62490 IntAct:P62490
MINT:MINT-4131822 STRING:P62490 PRIDE:P62490
Ensembl:ENSCAFT00000027321 GeneID:403957 KEGG:cfa:403957
InParanoid:P62490 NextBio:20817447 Uniprot:P62490
Length = 216
Score = 163 (62.4 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 46/177 (25%), Positives = 82/177 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+GD +GK++ + ++ NE S G+ +++ V G I
Sbjct: 5 DDEYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 210
IWD G R + AV L ++D+ T ++ W E R + I I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 123
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
K D +R L+ +ARA+A+ + +SA + NV F+ I+ +++ +
Sbjct: 124 NKSD--LR---HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
>UNIPROTKB|P62491 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0030133 "transport vesicle" evidence=IEA] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0051223 "regulation of protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0055038
"recycling endosome membrane" evidence=IEA] [GO:0019905 "syntaxin
binding" evidence=NAS] [GO:0048227 "plasma membrane to endosome
transport" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0032154 "cleavage furrow" evidence=IDA]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=IDA] [GO:0031175 "neuron projection development"
evidence=IMP] [GO:0072659 "protein localization to plasma membrane"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0016192 "vesicle-mediated transport" evidence=IDA] [GO:0032402
"melanosome transport" evidence=ISS] [GO:0055037 "recycling
endosome" evidence=ISS] [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
[GO:0006833 "water transport" evidence=TAS] [GO:0030659
"cytoplasmic vesicle membrane" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_15518
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0015031 GO:GO:0003924 GO:GO:0055085
GO:GO:0019905 GO:GO:0055037 GO:GO:0007049 GO:GO:0000910
GO:GO:0030659 GO:GO:0005802 GO:GO:0006833 GO:GO:0072659
PROSITE:PS51419 GO:GO:0030133 Pathway_Interaction_DB:txa2pathway
GO:GO:0031175 EMBL:CH471082 GO:GO:0048169 GO:GO:0032154
GO:GO:0051223 GO:GO:0055038 eggNOG:COG1100
Pathway_Interaction_DB:arf6downstreampathway GO:GO:0032402
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OMA:AMGTRDD CTD:8766
KO:K07904 OrthoDB:EOG4RR6J7 EMBL:X53143 EMBL:X56740 EMBL:AF000231
EMBL:AF498946 EMBL:CR407669 EMBL:CR536493 EMBL:BT020151
EMBL:BT020154 EMBL:AK311770 EMBL:BC013348 IPI:IPI00429190
PIR:S47169 RefSeq:NP_001193765.1 RefSeq:NP_004654.1
UniGene:Hs.321541 PDB:1OIV PDB:1OIW PDB:1OIX PDB:1YZK PDB:2D7C
PDB:2GZD PDB:2GZH PDB:2HV8 PDBsum:1OIV PDBsum:1OIW PDBsum:1OIX
PDBsum:1YZK PDBsum:2D7C PDBsum:2GZD PDBsum:2GZH PDBsum:2HV8
ProteinModelPortal:P62491 SMR:P62491 DIP:DIP-29138N IntAct:P62491
MINT:MINT-1434585 STRING:P62491 PhosphoSite:P62491 DMDM:50402542
OGP:P62491 PaxDb:P62491 PRIDE:P62491 DNASU:8766
Ensembl:ENST00000261890 GeneID:8766 KEGG:hsa:8766 UCSC:uc002apk.3
GeneCards:GC15P066018 HGNC:HGNC:9760 HPA:CAB013097 MIM:605570
neXtProt:NX_P62491 PharmGKB:PA34101 InParanoid:P62491
PhylomeDB:P62491 EvolutionaryTrace:P62491 GenomeRNAi:8766
NextBio:32876 ArrayExpress:P62491 Bgee:P62491 CleanEx:HS_RAB11A
Genevestigator:P62491 GermOnline:ENSG00000103769 GO:GO:0048227
Uniprot:P62491
Length = 216
Score = 163 (62.4 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 46/177 (25%), Positives = 82/177 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+GD +GK++ + ++ NE S G+ +++ V G I
Sbjct: 5 DDEYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 210
IWD G R + AV L ++D+ T ++ W E R + I I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 123
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
K D +R L+ +ARA+A+ + +SA + NV F+ I+ +++ +
Sbjct: 124 NKSD--LR---HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
>UNIPROTKB|Q52NJ1 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9823
"Sus scrofa" [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0055037 "recycling endosome" evidence=ISS] [GO:0032402
"melanosome transport" evidence=ISS] [GO:0072659 "protein
localization to plasma membrane" evidence=ISS] [GO:0031175 "neuron
projection development" evidence=ISS] [GO:0032154 "cleavage furrow"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0055038 "recycling endosome membrane" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0007049 GO:GO:0000910 GO:GO:0005802
GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175 GO:GO:0032154
GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:AMGTRDD GeneTree:ENSGT00690000101664
CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7 EMBL:AY996814
RefSeq:NP_001026958.1 UniGene:Ssc.951 ProteinModelPortal:Q52NJ1
SMR:Q52NJ1 PRIDE:Q52NJ1 Ensembl:ENSSSCT00000024720 GeneID:595117
KEGG:ssc:595117 Uniprot:Q52NJ1
Length = 216
Score = 163 (62.4 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 46/177 (25%), Positives = 82/177 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+GD +GK++ + ++ NE S G+ +++ V G I
Sbjct: 5 DDEYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 210
IWD G R + AV L ++D+ T ++ W E R + I I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 123
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
K D +R L+ +ARA+A+ + +SA + NV F+ I+ +++ +
Sbjct: 124 NKSD--LR---HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
>UNIPROTKB|P62493 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9986
"Oryctolagus cuniculus" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0031175 "neuron projection development" evidence=ISS]
[GO:0032154 "cleavage furrow" evidence=ISS] [GO:0032402 "melanosome
transport" evidence=ISS] [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0072659 "protein localization to plasma membrane" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0007049 GO:GO:0000910 GO:GO:0005802
GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175 GO:GO:0032154
GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:AMGTRDD GeneTree:ENSGT00690000101664
CTD:8766 OrthoDB:EOG4RR6J7 EMBL:L19260 RefSeq:NP_001075720.1
UniGene:Ocu.1602 ProteinModelPortal:P62493 SMR:P62493
MINT:MINT-95772 STRING:P62493 PRIDE:P62493
Ensembl:ENSOCUT00000014754 GeneID:100009072 ChEMBL:CHEMBL1075143
Uniprot:P62493
Length = 216
Score = 163 (62.4 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 46/177 (25%), Positives = 82/177 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+GD +GK++ + ++ NE S G+ +++ V G I
Sbjct: 5 DDEYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 210
IWD G R + AV L ++D+ T ++ W E R + I I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 123
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
K D +R L+ +ARA+A+ + +SA + NV F+ I+ +++ +
Sbjct: 124 NKSD--LR---HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
>UNIPROTKB|Q5R9M7 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9601
"Pongo abelii" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0031175 "neuron projection development" evidence=ISS]
[GO:0032154 "cleavage furrow" evidence=ISS] [GO:0032402 "melanosome
transport" evidence=ISS] [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0072659 "protein localization to plasma membrane" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0007049 GO:GO:0000910 GO:GO:0005802
GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175 GO:GO:0032154
GO:GO:0055038 GO:GO:0032402 HOVERGEN:HBG009351 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 CTD:8766 KO:K07904 EMBL:CR859359
RefSeq:NP_001127429.1 UniGene:Pab.4950 ProteinModelPortal:Q5R9M7
SMR:Q5R9M7 PRIDE:Q5R9M7 Ensembl:ENSPPYT00000007758 GeneID:100174499
KEGG:pon:100174499 InParanoid:Q5R9M7 Uniprot:Q5R9M7
Length = 216
Score = 163 (62.4 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 46/177 (25%), Positives = 82/177 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+GD +GK++ + ++ NE S G+ +++ V G I
Sbjct: 5 DDEYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 210
IWD G R + AV L ++D+ T ++ W E R + I I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 123
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
K D +R L+ +ARA+A+ + +SA + NV F+ I+ +++ +
Sbjct: 124 NKSD--LR---HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
>MGI|MGI:1858202 [details] [associations]
symbol:Rab11a "RAB11a, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0003924
"GTPase activity" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005802 "trans-Golgi
network" evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=ISO] [GO:0030133 "transport vesicle"
evidence=ISO] [GO:0030424 "axon" evidence=IDA] [GO:0031175 "neuron
projection development" evidence=ISO] [GO:0032154 "cleavage furrow"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045335 "phagocytic vesicle" evidence=ISO] [GO:0045773
"positive regulation of axon extension" evidence=IMP] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0051223 "regulation of protein transport"
evidence=ISO] [GO:0055037 "recycling endosome" evidence=ISO;IDA]
[GO:0072659 "protein localization to plasma membrane" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1858202
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0043234 GO:GO:0016192 GO:GO:0015031
GO:GO:0003924 GO:GO:0055037 GO:GO:0007049 GO:GO:0000910
GO:GO:0005802 GO:GO:0072659 PROSITE:PS51419 GO:GO:0030133
GO:GO:0031175 GO:GO:0048169 GO:GO:0032154 GO:GO:0051223
GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:AMGTRDD CTD:8766 KO:K07904
OrthoDB:EOG4RR6J7 EMBL:AF127669 EMBL:AK014268 EMBL:AK132072
EMBL:AK132159 EMBL:AK147122 EMBL:BC010722 IPI:IPI00323897
RefSeq:NP_059078.2 UniGene:Mm.1387 ProteinModelPortal:P62492
SMR:P62492 IntAct:P62492 STRING:P62492 PhosphoSite:P62492
PaxDb:P62492 PRIDE:P62492 Ensembl:ENSMUST00000172298 GeneID:53869
KEGG:mmu:53869 InParanoid:P62492 NextBio:310717 Bgee:P62492
CleanEx:MM_RAB11A Genevestigator:P62492
GermOnline:ENSMUSG00000004771 Uniprot:P62492
Length = 216
Score = 163 (62.4 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 46/177 (25%), Positives = 82/177 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+GD +GK++ + ++ NE S G+ +++ V G I
Sbjct: 5 DDEYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 210
IWD G R + AV L ++D+ T ++ W E R + I I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 123
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
K D +R L+ +ARA+A+ + +SA + NV F+ I+ +++ +
Sbjct: 124 NKSD--LR---HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
>MGI|MGI:1914603 [details] [associations]
symbol:Rab31 "RAB31, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=ISO] [GO:0005769
"early endosome" evidence=ISO] [GO:0005770 "late endosome"
evidence=ISO] [GO:0005802 "trans-Golgi network" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0019003 "GDP binding" evidence=ISO] [GO:0031623
"receptor internalization" evidence=ISO] [GO:0032588 "trans-Golgi
network membrane" evidence=ISO] [GO:0032869 "cellular response to
insulin stimulus" evidence=ISO] [GO:0043001 "Golgi to plasma
membrane protein transport" evidence=ISO] [GO:0045055 "regulated
secretory pathway" evidence=ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO] [GO:0048193 "Golgi vesicle transport" evidence=ISO]
[GO:0090382 "phagosome maturation" evidence=ISO] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:1914603 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 GO:GO:0005770
GO:GO:0005802 PROSITE:PS51419 GO:GO:0005769 eggNOG:COG1100
GO:GO:0048193 HOVERGEN:HBG009351 CTD:11031 KO:K07892 OMA:SKQIPPL
OrthoDB:EOG48KRC8 EMBL:AK051270 EMBL:BC013063 IPI:IPI00222632
RefSeq:NP_598446.2 UniGene:Mm.29274 ProteinModelPortal:Q921E2
SMR:Q921E2 STRING:Q921E2 PhosphoSite:Q921E2 PaxDb:Q921E2
PRIDE:Q921E2 GeneID:106572 KEGG:mmu:106572 InParanoid:Q921E2
NextBio:358266 Bgee:Q921E2 CleanEx:MM_RAB31 Genevestigator:Q921E2
GermOnline:ENSMUSG00000056515 Uniprot:Q921E2
Length = 194
Score = 163 (62.4 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 42/166 (25%), Positives = 84/166 (50%)
Query: 101 LKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDS 159
LK+ LLGD +GK+S V ++V + + ++ G + + KT+ F IWD G
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
Query: 160 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDFVR 218
R P+ + + A + ++D+T + + +++ W E ++ I + I G K D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCD---- 121
Query: 219 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
D++ A+ YA+++ A + +SA + IN+ ++F+ I ++
Sbjct: 122 -LSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 166
>RGD|619762 [details] [associations]
symbol:Rab11a "RAB11a, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000910 "cytokinesis" evidence=IEA;ISO]
[GO:0003924 "GTPase activity" evidence=ISO;ISS;IDA] [GO:0005525
"GTP binding" evidence=IDA;TAS] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005802 "trans-Golgi network" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA;ISO] [GO:0030133
"transport vesicle" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0031175
"neuron projection development" evidence=ISO;ISS] [GO:0032154
"cleavage furrow" evidence=ISO;ISS] [GO:0032402 "melanosome
transport" evidence=ISS] [GO:0043234 "protein complex"
evidence=IEA;ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO;ISS] [GO:0045773 "positive regulation of axon
extension" evidence=ISO] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IMP] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0051223
"regulation of protein transport" evidence=IMP] [GO:0055037
"recycling endosome" evidence=ISO;IDA] [GO:0055038 "recycling
endosome membrane" evidence=IEA] [GO:0072659 "protein localization
to plasma membrane" evidence=ISO;ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:619762 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0005886 GO:GO:0007264 GO:GO:0043234
GO:GO:0016192 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0007049 GO:GO:0000910 GO:GO:0005802 GO:GO:0072659
PROSITE:PS51419 GO:GO:0030133 GO:GO:0031175 GO:GO:0048169
GO:GO:0032154 GO:GO:0051223 GO:GO:0055038 eggNOG:COG1100
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7
EMBL:M75153 EMBL:BC085727 IPI:IPI00214434 PIR:JN0056
RefSeq:NP_112414.1 UniGene:Rn.1016 ProteinModelPortal:P62494
SMR:P62494 DIP:DIP-46857N IntAct:P62494 STRING:P62494 PRIDE:P62494
Ensembl:ENSRNOT00000015598 GeneID:81830 KEGG:rno:81830
UCSC:RGD:619762 InParanoid:P62494 NextBio:615779
Genevestigator:P62494 GermOnline:ENSRNOG00000011302 Uniprot:P62494
Length = 216
Score = 163 (62.4 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 46/177 (25%), Positives = 82/177 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+GD +GK++ + ++ NE S G+ +++ V G I
Sbjct: 5 DDEYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 210
IWD G R + AV L ++D+ T ++ W E R + I I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 123
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
K D +R L+ +ARA+A+ + +SA + NV F+ I+ +++ +
Sbjct: 124 NKSD--LR---HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
>RGD|628598 [details] [associations]
symbol:Rab31 "RAB31, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005525 "GTP binding" evidence=ISO;ISS] [GO:0005769 "early
endosome" evidence=ISO;ISS;IDA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0019003 "GDP binding"
evidence=ISO;ISS] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0031623 "receptor internalization"
evidence=ISO;ISS] [GO:0032588 "trans-Golgi network membrane"
evidence=ISO;ISS] [GO:0032869 "cellular response to insulin
stimulus" evidence=ISO;ISS] [GO:0043001 "Golgi to plasma membrane
protein transport" evidence=ISO;ISS] [GO:0045055 "regulated
secretory pathway" evidence=ISO;ISS] [GO:0045335 "phagocytic
vesicle" evidence=ISO;ISS] [GO:0048193 "Golgi vesicle transport"
evidence=IMP] [GO:0090382 "phagosome maturation" evidence=ISO;ISS]
[GO:0005770 "late endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:628598 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0048193 HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:11031
KO:K07892 OrthoDB:EOG48KRC8 EMBL:AF254800 EMBL:BC072698
IPI:IPI00454495 RefSeq:NP_659562.2 UniGene:Rn.28921
ProteinModelPortal:Q6GQP4 SMR:Q6GQP4 IntAct:Q6GQP4 STRING:Q6GQP4
PRIDE:Q6GQP4 Ensembl:ENSRNOT00000067974 GeneID:246324
KEGG:rno:246324 GeneTree:ENSGT00640000091139 NextBio:623748
ArrayExpress:Q6GQP4 Genevestigator:Q6GQP4 Uniprot:Q6GQP4
Length = 194
Score = 163 (62.4 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 42/166 (25%), Positives = 84/166 (50%)
Query: 101 LKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDS 159
LK+ LLGD +GK+S V ++V + + ++ G + + KT+ F IWD G
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
Query: 160 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDFVR 218
R P+ + + A + ++D+T + + +++ W E ++ I + I G K D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCD---- 121
Query: 219 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
D++ A+ YA+++ A + +SA + IN+ ++F+ I ++
Sbjct: 122 -LSDIREVPLKDAKEYAESIGALVVETSAKNAINIEELFQGISRQI 166
>TAIR|locus:2086290 [details] [associations]
symbol:RABA1g "RAB GTPase homolog A1G" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0046686 "response to cadmium ion" evidence=IEP] [GO:0005829
"cytosol" evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0046686 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 EMBL:AP000370
KO:K07976 HOGENOM:HOG000233968 HSSP:P35278 EMBL:AK118727
EMBL:BT005565 IPI:IPI00529915 RefSeq:NP_188124.1 UniGene:At.24446
UniGene:At.70390 ProteinModelPortal:Q9LK99 SMR:Q9LK99 PaxDb:Q9LK99
PRIDE:Q9LK99 EnsemblPlants:AT3G15060.1 GeneID:820735
KEGG:ath:AT3G15060 TAIR:At3g15060 InParanoid:Q9LK99 OMA:DHTEANI
PhylomeDB:Q9LK99 ProtClustDB:CLSN2915648 Genevestigator:Q9LK99
Uniprot:Q9LK99
Length = 217
Score = 163 (62.4 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 49/193 (25%), Positives = 87/193 (45%)
Query: 90 SGYDTDSDLVSL-KISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGAR 147
+ Y D D L K+ L+GD +GK++ + ++ NE S G+ +++ V
Sbjct: 2 AAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKI 61
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 207
+ IWD G R + AV L ++D+T T ++ W E R + I I
Sbjct: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVI 121
Query: 208 -LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 266
L+G K D +R L+ A+A+A+ +SA +NV F ++++++
Sbjct: 122 MLVGNKAD--LR---HLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYR 176
Query: 267 LPWTVKRNLTIGE 279
+ K+ L IG+
Sbjct: 177 V--ASKKALDIGD 187
>GENEDB_PFALCIPARUM|PF11_0461 [details] [associations]
symbol:Rab6 "PfRab6, GTPase" species:5833
"Plasmodium falciparum" [GO:0005794 "Golgi apparatus" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0015031
EMBL:AE014186 KO:K07976 HOGENOM:HOG000233968 OMA:TTKWIED
GenomeReviews:AE014186_GR RefSeq:XP_001348128.2
ProteinModelPortal:Q8IHR8 PRIDE:Q8IHR8
EnsemblProtists:PF11_0461:mRNA GeneID:811004 KEGG:pfa:PF11_0461
EuPathDB:PlasmoDB:PF3D7_1144900 ProtClustDB:PTZ00099 Uniprot:Q8IHR8
Length = 207
Score = 162 (62.1 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 43/175 (24%), Positives = 82/175 (46%)
Query: 95 DSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIW 153
+S L K+ LG+ +GKTS + +++ + + + Q G++ ++KTL + + +W
Sbjct: 6 NSGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLW 65
Query: 154 DVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEA-RKWNQTAIPILIGTK 212
D G R +P +D+ A + ++D+T+R + + W + + + I L+G K
Sbjct: 66 DTAGQERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNK 125
Query: 213 FDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
D DL+ + A+ +SA N+ +FK I +KL NL
Sbjct: 126 TD-----LGDLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIASKLPNL 175
>UNIPROTKB|E1C8J9 [details] [associations]
symbol:RAB3B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IEA] [GO:0018125 "peptidyl-cysteine methylation"
evidence=IEA] [GO:0030141 "secretory granule" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0008021
GO:GO:0030141 GO:GO:0017157 GO:GO:0018125
GeneTree:ENSGT00690000101942 CTD:5865 KO:K06108 OMA:PPSQQNC
EMBL:AADN02012575 IPI:IPI00598636 RefSeq:XP_422470.2
UniGene:Gga.9853 Ensembl:ENSGALT00000017197 GeneID:424636
KEGG:gga:424636 NextBio:20826946 Uniprot:E1C8J9
Length = 219
Score = 162 (62.1 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 44/170 (25%), Positives = 84/170 (49%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ ++G+ +GKTSF+ +Y + + + G++ KT+ R+
Sbjct: 16 DQNFDYM-FKLLIIGNSSVGKTSFLFRYADDTFTSAFVSTVGIDFKVKTVYRNDKRVKLQ 74
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR--KWNQTAIPILI 209
IWD G R + A+ + M+D+TS + N++ W ++ + W+ + IL+
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITSEDSFNAVQDWATQIKTYSWDNAQV-ILV 133
Query: 210 GTKFD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 258
G K D + R+ P L+ + + A + F +SA NINV ++F+
Sbjct: 134 GNKCDMEDERIIP-LE-----KGKHLADQLGFDYFEASAKENINVRQVFE 177
>UNIPROTKB|B4DMK0 [details] [associations]
symbol:RAB11B "cDNA FLJ61134, highly similar to Ras-related
protein Rab-11B" species:9606 "Homo sapiens" [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 HOGENOM:HOG000233968 UniGene:Hs.626404
EMBL:AK297498 IPI:IPI01022454 ProteinModelPortal:B4DMK0 SMR:B4DMK0
STRING:B4DMK0 PRIDE:B4DMK0 Uniprot:B4DMK0
Length = 179
Score = 162 (62.1 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 47/171 (27%), Positives = 79/171 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+GD +GK++ + ++ NE S G+ +++ V G I
Sbjct: 5 DDEYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 210
IWD G R + AV L ++D+ T ++ W E R + I I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 123
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIM 261
K D +R L+ +ARA+A+ + +SA + NV + FK I+
Sbjct: 124 NKSD--LR---HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNIL 169
>UNIPROTKB|Q8IHR8 [details] [associations]
symbol:Rab6 "PfRab6, GTPase" species:36329 "Plasmodium
falciparum 3D7" [GO:0005794 "Golgi apparatus" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0015031
EMBL:AE014186 KO:K07976 HOGENOM:HOG000233968 OMA:TTKWIED
GenomeReviews:AE014186_GR RefSeq:XP_001348128.2
ProteinModelPortal:Q8IHR8 PRIDE:Q8IHR8
EnsemblProtists:PF11_0461:mRNA GeneID:811004 KEGG:pfa:PF11_0461
EuPathDB:PlasmoDB:PF3D7_1144900 ProtClustDB:PTZ00099 Uniprot:Q8IHR8
Length = 207
Score = 162 (62.1 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 43/175 (24%), Positives = 82/175 (46%)
Query: 95 DSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIW 153
+S L K+ LG+ +GKTS + +++ + + + Q G++ ++KTL + + +W
Sbjct: 6 NSGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLW 65
Query: 154 DVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEA-RKWNQTAIPILIGTK 212
D G R +P +D+ A + ++D+T+R + + W + + + I L+G K
Sbjct: 66 DTAGQERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNK 125
Query: 213 FDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
D DL+ + A+ +SA N+ +FK I +KL NL
Sbjct: 126 TD-----LGDLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIASKLPNL 175
>RGD|1304742 [details] [associations]
symbol:Rab37 "RAB37, member of RAS oncogene family"
species:10116 "Rattus norvegicus" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:1304742 RGD:2319982 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GeneTree:ENSGT00700000104031
IPI:IPI00392981 Ensembl:ENSRNOT00000038103 ArrayExpress:F1M5M8
Uniprot:F1M5M8
Length = 196
Score = 162 (62.1 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 40/114 (35%), Positives = 63/114 (55%)
Query: 105 LLGDCQIGKTSFVVKY-VGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDSRSF 162
L+GD +GKTS +V++ G S G+ NK + V GAR+ IWD G R F
Sbjct: 7 LVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGARVKLQIWDTAGQER-F 65
Query: 163 DHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 214
V A +DA A+L ++D+T++ + ++I W +E ++ Q + I L+G K D
Sbjct: 66 RSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEYAQRDVVIMLLGNKAD 119
>RGD|2319982 [details] [associations]
symbol:LOC100364984 "rCG35079-like" species:10116 "Rattus
norvegicus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:1304742 RGD:2319982 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104031 IPI:IPI00392981
Ensembl:ENSRNOT00000038103 ArrayExpress:F1M5M8 Uniprot:F1M5M8
Length = 196
Score = 162 (62.1 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 40/114 (35%), Positives = 63/114 (55%)
Query: 105 LLGDCQIGKTSFVVKY-VGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDSRSF 162
L+GD +GKTS +V++ G S G+ NK + V GAR+ IWD G R F
Sbjct: 7 LVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGARVKLQIWDTAGQER-F 65
Query: 163 DHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 214
V A +DA A+L ++D+T++ + ++I W +E ++ Q + I L+G K D
Sbjct: 66 RSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEYAQRDVVIMLLGNKAD 119
>ZFIN|ZDB-GENE-040801-62 [details] [associations]
symbol:rab35 "RAB35, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040801-62 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
CTD:11021 KO:K07876 EMBL:BC077124 IPI:IPI00919647
RefSeq:NP_001003548.1 UniGene:Dr.14855 ProteinModelPortal:Q6DEJ0
SMR:Q6DEJ0 GeneID:445154 KEGG:dre:445154 InParanoid:Q6DEJ0
NextBio:20831916 ArrayExpress:Q6DEJ0 Uniprot:Q6DEJ0
Length = 201
Score = 162 (62.1 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 40/160 (25%), Positives = 78/160 (48%)
Query: 102 KISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
K+ ++GD +GK+S ++++ N S + G++ +T+ + G ++ IWD G R
Sbjct: 10 KLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVELNGEKVKLQIWDTAGQER 69
Query: 161 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLP 220
+ ++ ++D+TS + ++ W E + IL+G K DD
Sbjct: 70 FRTITSTYYRGTHGVVVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDD----- 124
Query: 221 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 260
P+ + A+ +A+ M +LF +SA N+NV ++F I
Sbjct: 125 PNSKVVETNDAQKFAEQMGISLFETSAKENVNVEEMFNCI 164
>ZFIN|ZDB-GENE-041114-53 [details] [associations]
symbol:rab11a "RAB11a, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0001525
"angiogenesis" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0070121 "Kupffer's vesicle development"
evidence=IMP] [GO:0032402 "melanosome transport" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-041114-53
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0001525 GO:GO:0070121 eggNOG:COG1100 GO:GO:0032402
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7
EMBL:BX908395 EMBL:BC085585 EMBL:BX914216 IPI:IPI00510031
RefSeq:NP_001007360.1 UniGene:Dr.119095 SMR:Q5U3E1 STRING:Q5U3E1
Ensembl:ENSDART00000060766 GeneID:492487 KEGG:dre:492487
InParanoid:Q5U3E1 NextBio:20865048 Uniprot:Q5U3E1
Length = 215
Score = 162 (62.1 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 45/177 (25%), Positives = 82/177 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+GD +GK++ + ++ NE S G+ +++ V G +
Sbjct: 5 DDEYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQ 63
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 210
IWD G R + AV L ++D+ T ++ W E R + I I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 123
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
K D +R L+ +ARA+A+ + +SA + NV F+ I+ +++ +
Sbjct: 124 NKSD--LR---HLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRI 175
>DICTYBASE|DDB_G0271984 [details] [associations]
symbol:rab5A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0271984
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GenomeReviews:CM000151_GR EMBL:AAFI02000007
GO:GO:0010008 PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HSSP:P20339
RefSeq:XP_645357.1 ProteinModelPortal:Q86JP3 SMR:Q86JP3
PRIDE:Q86JP3 EnsemblProtists:DDB0229401 GeneID:8618246
KEGG:ddi:DDB_G0271984 OMA:VDLQESN ProtClustDB:CLSZ2431305
Uniprot:Q86JP3
Length = 201
Score = 161 (61.7 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 45/180 (25%), Positives = 82/180 (45%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFS 151
+ ++ + K+ LLG+ +GK+S V+++V G+ + G + +T+ + + F
Sbjct: 2 NNNNKIFQFKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKFE 61
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 210
IWD G R P+ + A A + ++D+ S + + W E ++ I I L G
Sbjct: 62 IWDTAGQERYHTLAPMYYRGAQAAIVVYDIRSEDSFERAIKWVKELQRQGSPNIVIALAG 121
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWT 270
K D + + +A+ YA+ +SA + NVN++F I KL P T
Sbjct: 122 NKLDLAAKRKVE-----TAEAQQYAEENGLLFMETSAKTSQNVNELFVEIAKKLPKTPTT 176
>UNIPROTKB|E2QW69 [details] [associations]
symbol:RAB5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030742 "GTP-dependent protein binding"
evidence=IEA] [GO:0030139 "endocytic vesicle" evidence=IEA]
[GO:0030100 "regulation of endocytosis" evidence=IEA] [GO:0007032
"endosome organization" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0030100 GO:GO:0030139
GO:GO:0007032 GeneTree:ENSGT00640000091139 CTD:5869 KO:K07888
OMA:GTQGKIC EMBL:AAEX03006917 RefSeq:XP_531627.2
ProteinModelPortal:E2QW69 SMR:E2QW69 PRIDE:E2QW69
Ensembl:ENSCAFT00000000142 GeneID:474394 KEGG:cfa:474394
NextBio:20850419 Uniprot:E2QW69
Length = 215
Score = 161 (61.7 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 47/177 (26%), Positives = 81/177 (45%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARI 148
+G S + K+ LLG+ +GK+S V+++V G E G + +++ + +
Sbjct: 10 NGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTV 69
Query: 149 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 207
F IWD G R P+ + A A + ++D+T++ T W E ++ +I I
Sbjct: 70 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIA 129
Query: 208 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
L G K D + + + +A+AYA +SA +NVN +F I KL
Sbjct: 130 LAGNKADLANKRMVEYE-----EAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>UNIPROTKB|E2RP90 [details] [associations]
symbol:RAB43 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104044 KO:K07930 OMA:LIGDCGT
EMBL:AAEX03012024 RefSeq:XP_003639768.1 ProteinModelPortal:E2RP90
Ensembl:ENSCAFT00000006967 GeneID:100856686 KEGG:cfa:100856686
Uniprot:E2RP90
Length = 212
Score = 161 (61.7 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 38/124 (30%), Positives = 58/124 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKY-VGNEQERSLQMAGLNLINKTLMVQGARIAFS 151
D D + K+ L+GD +GKT V ++ G ER G++ KTL +QG R+
Sbjct: 12 DEQYDFL-FKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQ 70
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIG 210
IWD G R + A + +D+T R + S+ W + RK+ + +LIG
Sbjct: 71 IWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIG 130
Query: 211 TKFD 214
K D
Sbjct: 131 NKSD 134
>UNIPROTKB|P61020 [details] [associations]
symbol:RAB5B "Ras-related protein Rab-5B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0030100 "regulation of endocytosis"
evidence=IEA] [GO:0030139 "endocytic vesicle" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0031901 "early
endosome membrane" evidence=IEA] [GO:0042470 "melanosome"
evidence=IEA] [GO:0030742 "GTP-dependent protein binding"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019003 "GDP binding"
evidence=IDA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0016020 "membrane" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] [GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0042470 GO:GO:0007264
GO:GO:0031901 GO:GO:0015031 GO:GO:0005768 GO:GO:0003924
EMBL:CH471054 GO:GO:0030100 GO:GO:0030139 PROSITE:PS51419
GO:GO:0007032 eggNOG:COG1100 GO:GO:0030742 GO:GO:0019003
HOVERGEN:HBG009351 EMBL:AC034102 OrthoDB:EOG4Z0B6M CTD:5869
KO:K07888 EMBL:X54871 EMBL:AF498937 EMBL:AK292597 EMBL:AK296517
EMBL:BX537408 EMBL:BC032740 EMBL:BC040143 EMBL:BC050558
EMBL:BC056422 EMBL:BC065298 IPI:IPI00017344 PIR:A43925
RefSeq:NP_001238965.1 RefSeq:NP_001238966.1 RefSeq:NP_002859.1
UniGene:Hs.157659 PDB:2HEI PDBsum:2HEI ProteinModelPortal:P61020
SMR:P61020 IntAct:P61020 STRING:P61020 PhosphoSite:P61020
DMDM:46577637 PaxDb:P61020 PRIDE:P61020 DNASU:5869
Ensembl:ENST00000360299 Ensembl:ENST00000448789
Ensembl:ENST00000553116 GeneID:5869 KEGG:hsa:5869 UCSC:uc001siv.3
GeneCards:GC12P056368 HGNC:HGNC:9784 HPA:CAB010224 MIM:179514
neXtProt:NX_P61020 PharmGKB:PA34144 InParanoid:P61020 OMA:GTQGKIC
PhylomeDB:P61020 ChiTaRS:RAB5B EvolutionaryTrace:P61020
GenomeRNAi:5869 NextBio:22794 ArrayExpress:P61020 Bgee:P61020
CleanEx:HS_RAB5B Genevestigator:P61020 Uniprot:P61020
Length = 215
Score = 161 (61.7 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 47/177 (26%), Positives = 81/177 (45%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARI 148
+G S + K+ LLG+ +GK+S V+++V G E G + +++ + +
Sbjct: 10 NGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTV 69
Query: 149 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 207
F IWD G R P+ + A A + ++D+T++ T W E ++ +I I
Sbjct: 70 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIA 129
Query: 208 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
L G K D + + + +A+AYA +SA +NVN +F I KL
Sbjct: 130 LAGNKADLANKRMVEYE-----EAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>UNIPROTKB|Q86YS6 [details] [associations]
symbol:RAB43 "Ras-related protein Rab-43" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0007030 "Golgi
organization" evidence=IMP] [GO:0035526 "retrograde transport,
plasma membrane to Golgi" evidence=IMP] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0090382 "phagosome maturation" evidence=IMP] [GO:0006184 "GTP
catabolic process" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 EMBL:CH471052 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 GermOnline:ENSG00000172780
HOGENOM:HOG000233968 OrthoDB:EOG4WQ13N CleanEx:HS_RAB41
EMBL:AY166852 EMBL:AK291014 EMBL:BC062319 IPI:IPI00329441
RefSeq:NP_001191812.1 RefSeq:NP_001191813.1 RefSeq:NP_001191814.1
RefSeq:NP_001191815.1 RefSeq:NP_940892.1 UniGene:Hs.381132
UniGene:Hs.546542 PDB:2HUP PDBsum:2HUP ProteinModelPortal:Q86YS6
SMR:Q86YS6 STRING:Q86YS6 PhosphoSite:Q86YS6 DMDM:74727944
PaxDb:Q86YS6 PRIDE:Q86YS6 Ensembl:ENST00000315150
Ensembl:ENST00000393304 Ensembl:ENST00000393305
Ensembl:ENST00000393307 Ensembl:ENST00000393308 GeneID:339122
KEGG:hsa:339122 UCSC:uc003eln.2 CTD:339122 GeneCards:GC03M128806
HGNC:HGNC:19983 HPA:HPA046840 neXtProt:NX_Q86YS6
PharmGKB:PA134968262 InParanoid:Q86YS6 KO:K07930 OMA:LIGDCGT
EvolutionaryTrace:Q86YS6 GenomeRNAi:339122 NextBio:97235
ArrayExpress:Q86YS6 Bgee:Q86YS6 CleanEx:HS_RAB43
Genevestigator:Q86YS6 Uniprot:Q86YS6
Length = 212
Score = 161 (61.7 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 38/124 (30%), Positives = 58/124 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKY-VGNEQERSLQMAGLNLINKTLMVQGARIAFS 151
D D + K+ L+GD +GKT V ++ G ER G++ KTL +QG R+
Sbjct: 12 DEQYDFL-FKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQ 70
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIG 210
IWD G R + A + +D+T R + S+ W + RK+ + +LIG
Sbjct: 71 IWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIG 130
Query: 211 TKFD 214
K D
Sbjct: 131 NKSD 134
>UNIPROTKB|I3LMP5 [details] [associations]
symbol:RAB42 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00690000101664 KO:K07929 OMA:RFRCITR
EMBL:FP565629 RefSeq:XP_003356293.1 Ensembl:ENSSSCT00000031603
GeneID:100621746 KEGG:ssc:100621746 Uniprot:I3LMP5
Length = 219
Score = 161 (61.7 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 50/170 (29%), Positives = 84/170 (49%)
Query: 102 KISLLGDCQIGKTSFVVKYVGN-----EQERSLQMA---GLNLINKTLMVQ-GARIAFSI 152
+I+LLGD +GKTS + +YV + E E L+ A G+ ++TL ++ G R+ +
Sbjct: 11 RIALLGDTAVGKTSLLRRYVADAPWIPEPEPELESAPTVGVEFYSRTLQLRAGPRVKLQL 70
Query: 153 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE--ARKWNQTAIPILIG 210
WD G R ++ V +L +FD+T+R + I W+ E A + AI +L+G
Sbjct: 71 WDTAGQERFRCITRSFYRNVVGVLLVFDVTNRKSFEHIRDWHQEVMATQGPDKAIFLLVG 130
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 260
K D L ++ A +A A ++ +SA +N NV+ F +
Sbjct: 131 HKSD----LQ-SMRCVSAQEAEELAASLGMAFVETSAKNNCNVDLAFNTV 175
>UNIPROTKB|Q5RBG1 [details] [associations]
symbol:RAB5B "Ras-related protein Rab-5B" species:9601
"Pongo abelii" [GO:0019003 "GDP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0042470 GO:GO:0007264
GO:GO:0031901 GO:GO:0015031 GO:GO:0030100 GO:GO:0030139
PROSITE:PS51419 GO:GO:0007032 GO:GO:0019003 HOVERGEN:HBG009351
HSSP:P20339 CTD:5869 KO:K07888 OMA:GTQGKIC EMBL:CR858688
RefSeq:NP_001125512.1 UniGene:Pab.4552 ProteinModelPortal:Q5RBG1
SMR:Q5RBG1 PRIDE:Q5RBG1 GeneID:100172422 KEGG:pon:100172422
InParanoid:Q5RBG1 Uniprot:Q5RBG1
Length = 215
Score = 161 (61.7 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 47/177 (26%), Positives = 81/177 (45%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARI 148
+G S + K+ LLG+ +GK+S V+++V G E G + +++ + +
Sbjct: 10 NGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTV 69
Query: 149 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 207
F IWD G R P+ + A A + ++D+T++ T W E ++ +I I
Sbjct: 70 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIA 129
Query: 208 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
L G K D + + + +A+AYA +SA +NVN +F I KL
Sbjct: 130 LAGNKADLANKRMVEYE-----EAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>MGI|MGI:105938 [details] [associations]
symbol:Rab5b "RAB5B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005768 "endosome"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=TAS] [GO:0006810
"transport" evidence=IEA] [GO:0007032 "endosome organization"
evidence=IDA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO] [GO:0030100 "regulation of endocytosis"
evidence=IDA] [GO:0030139 "endocytic vesicle" evidence=IDA]
[GO:0030742 "GTP-dependent protein binding" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:105938
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0042470
GO:GO:0007264 GO:GO:0031901 GO:GO:0015031 GO:GO:0003924
GO:GO:0030100 GO:GO:0030139 PROSITE:PS51419 GO:GO:0007032
eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
GeneTree:ENSGT00640000091139 OrthoDB:EOG4Z0B6M CTD:5869 KO:K07888
OMA:GTQGKIC EMBL:X84239 EMBL:AK081251 EMBL:M79311 IPI:IPI00116563
PIR:JH0640 PIR:S65932 RefSeq:NP_803130.1 UniGene:Mm.12815
UniGene:Mm.471965 UniGene:Mm.490984 ProteinModelPortal:P61021
SMR:P61021 STRING:P61021 PhosphoSite:P61021 PaxDb:P61021
PRIDE:P61021 Ensembl:ENSMUST00000000727 GeneID:19344 KEGG:mmu:19344
InParanoid:P61021 NextBio:296355 Bgee:P61021 CleanEx:MM_RAB5B
Genevestigator:P61021 GermOnline:ENSMUSG00000000711
GermOnline:ENSMUSG00000074931 Uniprot:P61021
Length = 215
Score = 161 (61.7 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 47/177 (26%), Positives = 81/177 (45%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARI 148
+G S + K+ LLG+ +GK+S V+++V G E G + +++ + +
Sbjct: 10 NGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTV 69
Query: 149 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 207
F IWD G R P+ + A A + ++D+T++ T W E ++ +I I
Sbjct: 70 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIA 129
Query: 208 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
L G K D + + + +A+AYA +SA +NVN +F I KL
Sbjct: 130 LAGNKADLANKRMVEYE-----EAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
>TAIR|locus:2084056 [details] [associations]
symbol:RAB8 "RAB GTPase homolog 8" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0007264 GO:GO:0000139 GO:GO:0015031
EMBL:AL132966 PROSITE:PS51419 eggNOG:COG1100 UniGene:At.10020
HOGENOM:HOG000233968 HSSP:P07560 KO:K07901 OMA:SNVEQHA EMBL:U82434
EMBL:BT004779 EMBL:AK228083 EMBL:AK230120 EMBL:AY086756
IPI:IPI00517955 PIR:T45901 RefSeq:NP_001078278.1 RefSeq:NP_190929.1
RefSeq:NP_850696.1 ProteinModelPortal:O24466 SMR:O24466
IntAct:O24466 STRING:O24466 PaxDb:O24466 PRIDE:O24466
EnsemblPlants:AT3G53610.1 EnsemblPlants:AT3G53610.2
EnsemblPlants:AT3G53610.3 GeneID:824529 KEGG:ath:AT3G53610
TAIR:At3g53610 InParanoid:O24466 PhylomeDB:O24466
ProtClustDB:CLSN2684931 Genevestigator:O24466 Uniprot:O24466
Length = 216
Score = 161 (61.7 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 51/174 (29%), Positives = 87/174 (50%)
Query: 95 DSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIW 153
D D + +K+ L+GD +GK+ ++++ G+ + G++ +T+ + G RI IW
Sbjct: 11 DYDYL-IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
Query: 154 DVGGDSRSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI-PILIGT 211
D G R F + A + A+ IL ++D+T + N+I W + ++ IL+G
Sbjct: 70 DTAGQER-FRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGN 128
Query: 212 K--FDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAK 263
K D+ R P + QA A MK F +SA N+NV ++F F +AK
Sbjct: 129 KADMDESKRAVPKSKG----QALADEYGMK--FFETSAKTNLNVEEVF-FSIAK 175
>TAIR|locus:2124092 [details] [associations]
symbol:RABA1d "RAB GTPase homolog A1D" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0031901 "early
endosome membrane" evidence=IDA] [GO:0032588 "trans-Golgi network
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0009506 GO:GO:0005794 GO:GO:0007264 GO:GO:0031901
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0032588 EMBL:AL161549
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 EMBL:AL035526
KO:K07976 HOGENOM:HOG000233968 ProtClustDB:CLSN2685455
EMBL:BT003901 EMBL:BT004936 EMBL:AK228509 IPI:IPI00535318
PIR:T04872 RefSeq:NP_193615.1 UniGene:At.24230 HSSP:P20339
ProteinModelPortal:Q9SN35 SMR:Q9SN35 IntAct:Q9SN35 PaxDb:Q9SN35
PRIDE:Q9SN35 EnsemblPlants:AT4G18800.1 GeneID:827614
KEGG:ath:AT4G18800 TAIR:At4g18800 InParanoid:Q9SN35 OMA:AMGTRDD
PhylomeDB:Q9SN35 Genevestigator:Q9SN35 Uniprot:Q9SN35
Length = 214
Score = 161 (61.7 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 52/196 (26%), Positives = 88/196 (44%)
Query: 90 SGYDTDSDLVSL-KISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGAR 147
+GY D D L K+ L+GD +GK++ + ++ NE S G+ ++L V
Sbjct: 2 AGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKV 61
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 207
I IWD G R + AV L ++D+T T ++ W E R I +
Sbjct: 62 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVV 121
Query: 208 -LIGTKFDDFVRLPPDLQWTIATQAR-AYAKAMKATLFF--SSATHNINVNKIFKFIMAK 263
L+G K DL+ +A Q A + A +L+F +SA + NV F ++ +
Sbjct: 122 MLVGNK--------SDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQ 173
Query: 264 LFNLPWTVKRNLTIGE 279
++++ K+ + GE
Sbjct: 174 IYHV--VSKKAMEAGE 187
>DICTYBASE|DDB_G0268068 [details] [associations]
symbol:rab6 "Rab GTPase" species:44689 "Dictyostelium
discoideum" [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0268068
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GenomeReviews:CM000150_GR GO:GO:0015031 EMBL:AAFI02000003
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 OMA:TTKWIED
RefSeq:XP_647531.1 HSSP:P20340 ProteinModelPortal:Q55FK2 SMR:Q55FK2
PRIDE:Q55FK2 EnsemblProtists:DDB0229392 GeneID:8616338
KEGG:ddi:DDB_G0268068 Uniprot:Q55FK2
Length = 208
Score = 160 (61.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 40/170 (23%), Positives = 82/170 (48%)
Query: 98 LVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 156
L K+ LGD +GKTS + +++ + + + Q G++ ++KT+ ++ + +WD
Sbjct: 4 LSKYKLVFLGDQSVGKTSIITRFMYDTFDITYQATIGIDFLSKTMYLEDRTVRLQLWDTA 63
Query: 157 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR--KWNQTAIPILIGTKFD 214
G R +P +D+ + ++D+T++ + + + W + R + N I +L+G K D
Sbjct: 64 GQERFRSLIPSYIRDSSVAIVVYDITNKVSFTNTIKWIEDVRNERGNNVVI-MLVGNKTD 122
Query: 215 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
L Q +I + A AK +SA N+ +F+ + + L
Sbjct: 123 ----LADKRQVSIE-EGEAKAKEYDIMFTETSAKAGFNIKALFRKVASAL 167
>UNIPROTKB|Q2TA29 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9913
"Bos taurus" [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0055037
"recycling endosome" evidence=ISS] [GO:0032402 "melanosome
transport" evidence=ISS] [GO:0072659 "protein localization to
plasma membrane" evidence=ISS] [GO:0031175 "neuron projection
development" evidence=ISS] [GO:0032154 "cleavage furrow"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0055038 "recycling endosome membrane" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0007049 GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175
GO:GO:0032154 GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:Q15907 EMBL:BC111143
IPI:IPI00695221 RefSeq:NP_001033251.1 UniGene:Bt.44630
ProteinModelPortal:Q2TA29 SMR:Q2TA29 STRING:Q2TA29 PRIDE:Q2TA29
GeneID:534708 KEGG:bta:534708 CTD:8766 InParanoid:Q2TA29 KO:K07904
OrthoDB:EOG4RR6J7 NextBio:20876511 Uniprot:Q2TA29
Length = 216
Score = 160 (61.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 46/177 (25%), Positives = 81/177 (45%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+GD +GK++ + ++ NE S G+ +++ V G I
Sbjct: 5 DDEYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 210
IWD G R + AV L ++D+ T ++ W E R + I I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 123
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
K D +R L+ +ARA+A+ + +SA NV F+ I+ +++ +
Sbjct: 124 NKSD--LR---HLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRI 175
>UNIPROTKB|Q13636 [details] [associations]
symbol:RAB31 "Ras-related protein Rab-31" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0032588 "trans-Golgi network membrane"
evidence=IDA] [GO:0043001 "Golgi to plasma membrane protein
transport" evidence=IMP] [GO:0005525 "GTP binding" evidence=IDA]
[GO:0019003 "GDP binding" evidence=IDA] [GO:0005769 "early
endosome" evidence=IDA] [GO:0045055 "regulated secretory pathway"
evidence=IMP] [GO:0032869 "cellular response to insulin stimulus"
evidence=IMP] [GO:0031623 "receptor internalization" evidence=IMP]
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0090382
"phagosome maturation" evidence=IMP] [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0032588
GO:GO:0032869 GO:GO:0003924 GO:GO:0005770 PROSITE:PS51419
GO:GO:0005769 GO:GO:0043001 eggNOG:COG1100 GO:GO:0019003
GO:GO:0045055 HOVERGEN:HBG009351 EMBL:AP000902 EMBL:U57091
EMBL:U59877 EMBL:AF234995 EMBL:AF183421 EMBL:AF498957 EMBL:AK314809
EMBL:BT020027 EMBL:BT020028 EMBL:CR407659 EMBL:AC006238
EMBL:BC001148 IPI:IPI00014376 PIR:JC4961 RefSeq:NP_006859.2
UniGene:Hs.99528 PDB:2FG5 PDBsum:2FG5 ProteinModelPortal:Q13636
SMR:Q13636 IntAct:Q13636 MINT:MINT-1404598 STRING:Q13636
PhosphoSite:Q13636 DMDM:2500069 PaxDb:Q13636 PRIDE:Q13636
DNASU:11031 Ensembl:ENST00000306096 Ensembl:ENST00000578921
GeneID:11031 KEGG:hsa:11031 UCSC:uc002kog.2 CTD:11031
GeneCards:GC18P009701 HGNC:HGNC:9771 HPA:HPA019717 MIM:605694
neXtProt:NX_Q13636 PharmGKB:PA34122 InParanoid:Q13636 KO:K07892
OMA:SKQIPPL OrthoDB:EOG48KRC8 PhylomeDB:Q13636 ChiTaRS:RAB31
EvolutionaryTrace:Q13636 GenomeRNAi:11031 NextBio:41922 Bgee:Q13636
CleanEx:HS_RAB31 Genevestigator:Q13636 GermOnline:ENSG00000168461
Uniprot:Q13636
Length = 194
Score = 160 (61.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 42/166 (25%), Positives = 83/166 (50%)
Query: 101 LKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDS 159
LK+ LLGD +GK+S V ++V + + ++ G + + KT+ F IWD G
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
Query: 160 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDFVR 218
R P+ + + A + ++D+T + + ++ W E ++ I + I G K D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCD---- 121
Query: 219 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
D++ A+ YA+++ A + +SA + IN+ ++F+ I ++
Sbjct: 122 -LSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 166
>MGI|MGI:1917084 [details] [associations]
symbol:Rab43 "RAB43, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006184 "GTP catabolic process" evidence=ISO]
[GO:0007030 "Golgi organization" evidence=ISO] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0035526 "retrograde transport, plasma membrane to
Golgi" evidence=ISO] [GO:0045335 "phagocytic vesicle" evidence=ISO]
[GO:0090382 "phagosome maturation" evidence=ISO] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:1917084 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 OrthoDB:EOG4WQ13N CTD:339122 KO:K07930
OMA:LIGDCGT EMBL:AJ534465 IPI:IPI00468209 RefSeq:NP_001034483.1
UniGene:Mm.37380 ProteinModelPortal:Q8CG50 SMR:Q8CG50
PhosphoSite:Q8CG50 PaxDb:Q8CG50 PRIDE:Q8CG50
Ensembl:ENSMUST00000078647 GeneID:69834 KEGG:mmu:69834
InParanoid:Q8CG50 NextBio:330445 Bgee:Q8CG50 CleanEx:MM_RAB43
Genevestigator:Q8CG50 GermOnline:ENSMUSG00000030055 Uniprot:Q8CG50
Length = 210
Score = 160 (61.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 38/123 (30%), Positives = 58/123 (47%)
Query: 102 KISLLGDCQIGKTSFVVKY-VGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
K+ L+GD +GKT V ++ G R G++ KTL +QG R+ IWD G R
Sbjct: 18 KLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQER 77
Query: 161 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFD--DFV 217
+ A + +D++ R T S+ W + RK+ + +LIG K D DF
Sbjct: 78 FRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLADFR 137
Query: 218 RLP 220
+P
Sbjct: 138 EVP 140
>WB|WBGene00004274 [details] [associations]
symbol:rab-11.1 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA;TAS] [GO:0005525 "GTP
binding" evidence=IEA;TAS] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0006952 "defense response" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0055037
"recycling endosome" evidence=IDA] [GO:0060471 "cortical granule
exocytosis" evidence=IMP] [GO:0060473 "cortical granule"
evidence=IDA] [GO:0030703 "eggshell formation" evidence=IMP]
[GO:0032467 "positive regulation of cytokinesis" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0007264 GO:GO:0032467 GO:GO:0006952
GO:GO:0002119 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0000910 eggNOG:COG1100 GO:GO:0060473 GO:GO:0030703
HOGENOM:HOG000233968 OMA:AMGTRDD HSSP:P07560
GeneTree:ENSGT00690000101664 GO:GO:0060471 KO:K07904 EMBL:FO081455
PIR:T29035 RefSeq:NP_490675.1 ProteinModelPortal:O01803 SMR:O01803
DIP:DIP-24288N MINT:MINT-1111275 STRING:O01803 PaxDb:O01803
EnsemblMetazoa:F53G12.1.1 EnsemblMetazoa:F53G12.1.2 GeneID:171601
KEGG:cel:CELE_F53G12.1 UCSC:F53G12.1 CTD:171601 WormBase:F53G12.1
InParanoid:O01803 NextBio:871961 ArrayExpress:O01803 Uniprot:O01803
Length = 211
Score = 160 (61.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 43/175 (24%), Positives = 82/175 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+GD +GK++ + ++ NE S G+ +++ V+G +
Sbjct: 5 DDEYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQ 63
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIG 210
IWD G R + AV L ++D+ T ++ W E R +Q + +L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVG 123
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 265
K D +R L+ +A+ YA+ + + +SA + NV F I+ +++
Sbjct: 124 NKSD--LR---HLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIY 173
>WB|WBGene00004278 [details] [associations]
symbol:rab-19 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:AL132865 KO:K07976 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 OMA:LIGDCGT HSSP:P32939
RefSeq:NP_502576.1 ProteinModelPortal:Q9U1W9 SMR:Q9U1W9
EnsemblMetazoa:Y62E10A.9.1 EnsemblMetazoa:Y62E10A.9.2
EnsemblMetazoa:Y62E10A.9.3 EnsemblMetazoa:Y62E10A.9.4 GeneID:178301
KEGG:cel:CELE_Y62E10A.9 UCSC:Y62E10A.9.2 CTD:178301
WormBase:Y62E10A.9 InParanoid:Q9U1W9 NextBio:900570 Uniprot:Q9U1W9
Length = 210
Score = 160 (61.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 53/170 (31%), Positives = 79/170 (46%)
Query: 93 DTDSDLVSL-KISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARIAF 150
D D L KI L+GD +GKT V ++ G +R G++ KTL+V G R+
Sbjct: 2 DNDDGFDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKL 61
Query: 151 SIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQ-TAIPILI 209
IWD GG R + A I+ +D+T + + S+ W + K+ + +LI
Sbjct: 62 QIWDTGGQERFRTITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDVSKFAAPNVVKLLI 121
Query: 210 GTKFDDFVRLPPDLQWTIATQARAYAKA--MKATLFFSSATHNINVNKIF 257
GTK D D + A +A +A M A L +SA N+NV+ F
Sbjct: 122 GTKCD-----LEDQRAIEAEEAEMLQRANGMFAMLE-TSAKGNVNVDNAF 165
>UNIPROTKB|O01803 [details] [associations]
symbol:rab-11.1 "Protein RAB-11.1" species:6239
"Caenorhabditis elegans" [GO:0006184 "GTP catabolic process"
evidence=TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0006915 GO:GO:0007264 GO:GO:0032467
GO:GO:0006952 GO:GO:0002119 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0000910 eggNOG:COG1100 GO:GO:0060473
GO:GO:0030703 HOGENOM:HOG000233968 OMA:AMGTRDD HSSP:P07560
GeneTree:ENSGT00690000101664 GO:GO:0060471 KO:K07904 EMBL:FO081455
PIR:T29035 RefSeq:NP_490675.1 ProteinModelPortal:O01803 SMR:O01803
DIP:DIP-24288N MINT:MINT-1111275 STRING:O01803 PaxDb:O01803
EnsemblMetazoa:F53G12.1.1 EnsemblMetazoa:F53G12.1.2 GeneID:171601
KEGG:cel:CELE_F53G12.1 UCSC:F53G12.1 CTD:171601 WormBase:F53G12.1
InParanoid:O01803 NextBio:871961 ArrayExpress:O01803 Uniprot:O01803
Length = 211
Score = 160 (61.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 43/175 (24%), Positives = 82/175 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+GD +GK++ + ++ NE S G+ +++ V+G +
Sbjct: 5 DDEYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQ 63
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIG 210
IWD G R + AV L ++D+ T ++ W E R +Q + +L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVG 123
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 265
K D +R L+ +A+ YA+ + + +SA + NV F I+ +++
Sbjct: 124 NKSD--LR---HLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIY 173
>DICTYBASE|DDB_G0277441 [details] [associations]
symbol:rabJ "Rab GTPase" species:44689 "Dictyostelium
discoideum" [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0277441 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GenomeReviews:CM000151_GR EMBL:AAFI02000020 PROSITE:PS51419
eggNOG:COG1100 KO:K07976 HSSP:P20339 RefSeq:XP_642644.1
ProteinModelPortal:Q8MYF2 EnsemblProtists:DDB0229403 GeneID:8621060
KEGG:ddi:DDB_G0277441 OMA:KIKYLIW Uniprot:Q8MYF2
Length = 256
Score = 171 (65.3 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 48/165 (29%), Positives = 78/165 (47%)
Query: 102 KISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
K+ LLG +GKT+ ++YV G +R G + + +T+ ++G +I + IWD G R
Sbjct: 11 KVVLLGSSDVGKTALSLRYVDGIFPKRLTSTIGASFLTRTINIEGNKIKYLIWDSAGQDR 70
Query: 161 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFDDFVRL 219
+ + A + +FD+T + T + + GW E + + I +L G K D L
Sbjct: 71 FRSLATLYYRGACVAILVFDITQQKTFDIVKGWVEELKANIQEEIIMVLCGNKID----L 126
Query: 220 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
+ Q T A+ YA + A +SA N V +F I KL
Sbjct: 127 EQNRQVKSET-AKLYADEINAMYVETSAKENEGVEGMFLEIGKKL 170
>UNIPROTKB|F1RFB0 [details] [associations]
symbol:LOC100739113 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104031 KO:K07913 EMBL:FP102909
RefSeq:XP_003124780.1 RefSeq:XP_003481158.1 UniGene:Ssc.2116
Ensembl:ENSSSCT00000008813 GeneID:100516791 GeneID:100739113
KEGG:ssc:100516791 KEGG:ssc:100739113 OMA:PATHGSQ Uniprot:F1RFB0
Length = 256
Score = 171 (65.3 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 49/165 (29%), Positives = 84/165 (50%)
Query: 55 PAVRYQKLTRRSSSESSP-APDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGK 113
PA + + R ++ + P AP G + R+ S G D V+ K+ L+GD +GK
Sbjct: 21 PAAKGPRPVRPETARAGPEAPPN---GPPQPGRS-SLGGGGDIYDVAFKVMLVGDSGVGK 76
Query: 114 TSFVVKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIAC-K 170
T +V++ + G++ NK L V G ++ IWD G R F V A +
Sbjct: 77 TCLLVRFKDGAFLAGTFISTVGIDFRNKILDVDGMKVKLQIWDTAGQER-FRSVTHAYYR 135
Query: 171 DAVAILFMFDLTSRCTLNSIVGWYSEARKWNQT-AIPILIGTKFD 214
DA A+L ++D+T++ + +SI W +E +++ Q + +L+G K D
Sbjct: 136 DAHALLLLYDVTNKASFDSIQAWLTEIQEYAQRDVVLLLLGNKVD 180
>UNIPROTKB|E1C105 [details] [associations]
symbol:RAB3C "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 GO:GO:0017157 GeneTree:ENSGT00690000101942
EMBL:AADN02045695 EMBL:AADN02045696 EMBL:AADN02045697
EMBL:AADN02045698 EMBL:AADN02045699 EMBL:AADN02045700
EMBL:AADN02045701 EMBL:AADN02054671 EMBL:AADN02054672
EMBL:AADN02054673 EMBL:AADN02054674 EMBL:AADN02054675
EMBL:AADN02054676 EMBL:AADN02054677 IPI:IPI00599950
Ensembl:ENSGALT00000023749 OMA:SEAMSHS Uniprot:E1C105
Length = 212
Score = 159 (61.0 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 42/169 (24%), Positives = 80/169 (47%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ ++G+ +GKTSF+ +Y + + + G++ KT+ RI
Sbjct: 16 DQNFDYM-FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQ 74
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR--KWNQTAIPILI 209
IWD G R + A+ + M+D+T+ + N++ W ++ + W+ + IL+
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQV-ILV 133
Query: 210 GTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 258
G K D D + + + A+ + F +SA NINV + F+
Sbjct: 134 GNKCD-----MEDERVIFTERGKHLAEQLGFEFFETSAKDNINVKQTFE 177
>SGD|S000005615 [details] [associations]
symbol:VPS21 "Rab family GTPase" species:4932 "Saccharomyces
cerevisiae" [GO:0005525 "GTP binding" evidence=IEA;IDA] [GO:0003924
"GTPase activity" evidence=ISS;IDA;IMP] [GO:0005741 "mitochondrial
outer membrane" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0005770 "late endosome" evidence=IMP]
[GO:0006897 "endocytosis" evidence=IMP] [GO:0006623 "protein
targeting to vacuole" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0000011 "vacuole
inheritance" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
SGD:S000005615 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
EMBL:BK006948 GO:GO:0005741 GO:GO:0003924 GO:GO:0006897
GO:GO:0010008 GO:GO:0005770 GO:GO:0000011 EMBL:X94335
PROSITE:PS51419 GO:GO:0006623 eggNOG:COG1100 KO:K07976
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 EMBL:X76173
EMBL:Z29338 EMBL:Z74997 PIR:S43399 RefSeq:NP_014732.1 PDB:1EK0
PDBsum:1EK0 ProteinModelPortal:P36017 SMR:P36017 DIP:DIP-3801N
IntAct:P36017 MINT:MINT-507539 STRING:P36017 PaxDb:P36017
PeptideAtlas:P36017 PRIDE:P36017 EnsemblFungi:YOR089C GeneID:854256
KEGG:sce:YOR089C CYGD:YOR089c OMA:RTIKYEI OrthoDB:EOG47WRXZ
EvolutionaryTrace:P36017 NextBio:976182 Genevestigator:P36017
GermOnline:YOR089C Uniprot:P36017
Length = 210
Score = 159 (61.0 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 47/173 (27%), Positives = 79/173 (45%)
Query: 95 DSDLVSLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIW 153
++ + S+K+ LLG+ +GK+S V+++V N+ E G + + + + + F IW
Sbjct: 2 NTSVTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIW 61
Query: 154 DVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTK 212
D G R P+ ++A A L ++D+T + W E + I I L+G K
Sbjct: 62 DTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNK 121
Query: 213 FDDFVRLPPDLQWTIATQARAYAKAMKATLFF-SSATHNINVNKIFKFIMAKL 264
D L + +A + K LFF +SA NVN +F I K+
Sbjct: 122 ID---MLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKI 171
>TAIR|locus:2085084 [details] [associations]
symbol:RABC2b "RAB GTPase homolog C2B" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0007264 EMBL:AC015985 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 InterPro:IPR025662 PROSITE:PS00675
KO:K07976 HOGENOM:HOG000233968 HSSP:P07560 EMBL:BT012209
EMBL:BT012396 IPI:IPI00534966 RefSeq:NP_001189850.1
RefSeq:NP_001189851.1 RefSeq:NP_187602.1 UniGene:At.43236
ProteinModelPortal:Q9SF92 SMR:Q9SF92 PaxDb:Q9SF92 PRIDE:Q9SF92
EnsemblPlants:AT3G09910.1 EnsemblPlants:AT3G09910.2
EnsemblPlants:AT3G09910.3 GeneID:820149 KEGG:ath:AT3G09910
TAIR:At3g09910 InParanoid:Q9SF92 OMA:HECSART PhylomeDB:Q9SF92
ProtClustDB:CLSN2915695 Genevestigator:Q9SF92 Uniprot:Q9SF92
Length = 205
Score = 159 (61.0 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 50/187 (26%), Positives = 83/187 (44%)
Query: 85 SRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMAGLNLINKTLMVQ 144
S + SGYD +S KI L+GD +GK+S ++ ++ + E G++ K + V+
Sbjct: 3 SSSGQSGYD-----LSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVR 57
Query: 145 GARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCT-LNSIVGWYSEARKW--N 201
G R+ +IWD G + + + I+ ++D+T R T LN W E + N
Sbjct: 58 GKRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTN 117
Query: 202 QTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIM 261
I +L+G K D + + A AK + SA NVN F+ +
Sbjct: 118 HDCIKMLVGNKVDRESERKVSRE-----EGMALAKDLNCLFHECSARTRENVNGCFEELA 172
Query: 262 AKLFNLP 268
K+ +P
Sbjct: 173 LKIMEVP 179
>POMBASE|SPAC9E9.07c [details] [associations]
symbol:ypt2 "GTPase Ypt2" species:4896
"Schizosaccharomyces pombe" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0005525 "GTP binding" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006887
"exocytosis" evidence=IMP] [GO:0006893 "Golgi to plasma membrane
transport" evidence=ISO] [GO:0006906 "vesicle fusion" evidence=ISO]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
PomBase:SPAC9E9.07c GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0006886 GO:GO:0007264
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003924 GO:GO:0006887
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0006893 GO:GO:0006906
GO:GO:0065007 HOGENOM:HOG000233968 KO:K07901 OMA:SNVEQHA
OrthoDB:EOG4X3M9K EMBL:X52469 EMBL:X52864 PIR:S12790
RefSeq:NP_594580.1 ProteinModelPortal:P17609 SMR:P17609
STRING:P17609 PRIDE:P17609 EnsemblFungi:SPAC9E9.07c.1
GeneID:2543280 KEGG:spo:SPAC9E9.07c NextBio:20804300 Uniprot:P17609
Length = 200
Score = 158 (60.7 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 44/166 (26%), Positives = 84/166 (50%)
Query: 101 LKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 159
+K+ L+GD +GK+ ++++ + S + G++ +T+ + G RI IWD G
Sbjct: 10 IKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 69
Query: 160 RSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFDDFV 217
R F + A + A+ IL ++D+T + + +++ W+S + ++ ILIG K D
Sbjct: 70 R-FRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDC-- 126
Query: 218 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAK 263
D + Q +A A + +SA N+NV++ F F +A+
Sbjct: 127 ---EDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAF-FTLAR 168
>SGD|S000004252 [details] [associations]
symbol:YPT6 "Rab family GTPase" species:4932 "Saccharomyces
cerevisiae" [GO:0006886 "intracellular protein transport"
evidence=IGI;TAS] [GO:0016020 "membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=TAS] [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=IMP;TAS] [GO:0003924 "GTPase activity"
evidence=ISS;IDA;TAS] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006810
"transport" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
SGD:S000004252 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0006886 GO:GO:0007264 GO:GO:0003924
EMBL:BK006945 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0042147
EMBL:U17244 KO:K07976 HOGENOM:HOG000233968
GeneTree:ENSGT00600000084341 OMA:FKWIDEV OrthoDB:EOG44BFBD
EMBL:X59598 EMBL:AY557936 PIR:S51399 RefSeq:NP_013363.1
ProteinModelPortal:Q99260 SMR:Q99260 DIP:DIP-5577N IntAct:Q99260
MINT:MINT-491690 STRING:Q99260 PaxDb:Q99260 PRIDE:Q99260
EnsemblFungi:YLR262C GeneID:850966 KEGG:sce:YLR262C CYGD:YLR262c
NextBio:967454 Genevestigator:Q99260 GermOnline:YLR262C
Uniprot:Q99260
Length = 215
Score = 158 (60.7 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 44/172 (25%), Positives = 82/172 (47%)
Query: 98 LVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 156
L KI LG+ +GKTS + +++ + + Q G++ ++KT+ + I +WD
Sbjct: 8 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTA 67
Query: 157 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR--KWNQTAIPILIGTKFD 214
G R +P +D+ + ++D+T R + I W + + + ++ I ++G K D
Sbjct: 68 GQERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKSD 127
Query: 215 DFVRLPPDLQWTIATQ-ARAYAKAMKATLFFSSATH-NINVNKIFKFIMAKL 264
L + Q I+T+ AK + A +F ++T NV +FK I L
Sbjct: 128 ----LSDERQ--ISTEEGEKKAKLLGAKIFMETSTKAGYNVKALFKKIAKSL 173
>WB|WBGene00004270 [details] [associations]
symbol:rab-6.2 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0031985 "Golgi cisterna" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0006915
GO:GO:0007264 GO:GO:0016477 GO:GO:0008406 GO:GO:0015031
GO:GO:0048477 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0031985
KO:K07976 HOGENOM:HOG000233968 GeneTree:ENSGT00600000084341
EMBL:FO081722 PIR:T34375 RefSeq:NP_510790.1
ProteinModelPortal:Q22782 SMR:Q22782 IntAct:Q22782 STRING:Q22782
PaxDb:Q22782 PRIDE:Q22782 EnsemblMetazoa:T25G12.4 GeneID:181759
KEGG:cel:CELE_T25G12.4 UCSC:T25G12.4 CTD:181759 WormBase:T25G12.4
InParanoid:Q22782 OMA:TTKWIED NextBio:915226 ArrayExpress:Q22782
Uniprot:Q22782
Length = 205
Score = 158 (60.7 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 40/174 (22%), Positives = 80/174 (45%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFS 151
D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++ +
Sbjct: 3 DFGNPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQ 62
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIG 210
+WD G R +P +D+ + ++D+T+ + + W + R + I +L+G
Sbjct: 63 LWDTAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVG 122
Query: 211 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
K D L Q T + AK + +SA NV ++F+ I L
Sbjct: 123 NKTD----LSDKRQVT-TDEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGAL 171
>ZFIN|ZDB-GENE-040426-2593 [details] [associations]
symbol:rab5b "RAB5B, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040426-2593 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 CTD:5869
KO:K07888 HSSP:P61586 EMBL:BX511265 EMBL:BC066634 IPI:IPI00867975
RefSeq:NP_998050.1 UniGene:Dr.38267 SMR:Q6NYD6 STRING:Q6NYD6
Ensembl:ENSDART00000021065 GeneID:405821 KEGG:dre:405821
InParanoid:Q6NYD6 OMA:KKMPKTD NextBio:20817785 Uniprot:Q6NYD6
Length = 214
Score = 158 (60.7 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 51/190 (26%), Positives = 84/190 (44%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGAR 147
++G + + K+ LLGD +GK+S V+++V G E G + +++ +
Sbjct: 9 ANGNLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTT 68
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 207
+ F IWD G R P+ + A A + +FD+T T W E ++ I I
Sbjct: 69 VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVI 128
Query: 208 -LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 266
L G K D D + +A+ YA+ +SA +NVN++F I K+
Sbjct: 129 ALAGNKAD-----LADKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKKM-- 181
Query: 267 LPWTVKRNLT 276
P T +N T
Sbjct: 182 -PKTDTQNPT 190
>ZFIN|ZDB-GENE-040718-2 [details] [associations]
symbol:rab15 "RAB15, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040718-2 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104031 CTD:376267 KO:K07908 OMA:HNITETF
OrthoDB:EOG4HDSVG EMBL:BX255891 EMBL:BC075754 IPI:IPI00489491
RefSeq:NP_001002318.1 UniGene:Dr.84043 Ensembl:ENSDART00000049462
GeneID:436590 KEGG:dre:436590 InParanoid:Q6DI36 NextBio:20831039
Uniprot:Q6DI36
Length = 212
Score = 158 (60.7 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 44/161 (27%), Positives = 73/161 (45%)
Query: 99 VSLKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGG 157
V ++ LLGD +GKT + ++ NE S + G++ KTL + G ++ IWD G
Sbjct: 7 VLFRLLLLGDSGVGKTCLLCRFTDNEFHPSHISTIGVDFKMKTLEIDGIKVRIQIWDTAG 66
Query: 158 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFDDF 216
R + A I ++D+TS + I+ W S+ ++ + IL+G K D+
Sbjct: 67 QERYQTITKQYYRRAQGIFLVYDITSERSFQHIMKWASDVDEYAPEKVQKILVGNKSDE- 125
Query: 217 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
+ + Q AKA F +SA N N+ + F
Sbjct: 126 ----QEKRQVATEQGDKLAKAYGMDFFETSAFTNHNITESF 162
>SGD|S000000833 [details] [associations]
symbol:YPT31 "Rab family GTPase" species:4932 "Saccharomyces
cerevisiae" [GO:0005794 "Golgi apparatus" evidence=IEA;IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=ISS;IDA;IPI] [GO:0005768
"endosome" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0034498 "early
endosome to Golgi transport" evidence=IGI] [GO:0006887 "exocytosis"
evidence=IMP] [GO:0005741 "mitochondrial outer membrane"
evidence=IDA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IGI;IMP] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
SGD:S000000833 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0007264 GO:GO:0000139 GO:GO:0005741 GO:GO:0015031
GO:GO:0005768 GO:GO:0003924 EMBL:BK006939 GO:GO:0006887 EMBL:U18778
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0034498 PDB:3CPJ PDBsum:3CPJ
KO:K07976 HOGENOM:HOG000233968 GeneTree:ENSGT00690000101664
OMA:ERSAHDE EMBL:L17070 EMBL:X72833 PIR:S42679 RefSeq:NP_010948.1
ProteinModelPortal:P38555 SMR:P38555 DIP:DIP-2022N IntAct:P38555
MINT:MINT-386034 STRING:P38555 PaxDb:P38555 PeptideAtlas:P38555
PRIDE:P38555 EnsemblFungi:YER031C GeneID:856753 KEGG:sce:YER031C
OrthoDB:EOG41K2ND EvolutionaryTrace:P38555 NextBio:982908
Genevestigator:P38555 GermOnline:YER031C Uniprot:P38555
Length = 223
Score = 162 (62.1 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 50/194 (25%), Positives = 90/194 (46%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQER-SLQMAGLNLINKTLMVQGAR 147
S Y D DL+ KI L+GD +GK++ + ++ NE S G+ +TL + G R
Sbjct: 3 SEDYGYDYDLL-FKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKR 61
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 207
I IWD G R + AV L ++D++ + + W SE R+ + +
Sbjct: 62 IKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAV 121
Query: 208 -LIGTKFD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 265
LIG K D +R P +++ +A+ + +SA ++ NV+K F+ ++ ++
Sbjct: 122 GLIGNKSDLAHLRAVP------TEESKTFAQENQLLFTETSALNSENVDKAFEELINTIY 175
Query: 266 NLPWTVKRNLTIGE 279
K + +G+
Sbjct: 176 QK--VSKHQMDLGD 187
>MGI|MGI:97844 [details] [associations]
symbol:Rab3d "RAB3D, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006887 "exocytosis" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IDA] [GO:0018125 "peptidyl-cysteine methylation"
evidence=IDA] [GO:0030133 "transport vesicle" evidence=ISO]
[GO:0042588 "zymogen granule" evidence=IDA] [GO:0051020 "GTPase
binding" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:97844 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 GO:GO:0006887
PROSITE:PS51419 GO:GO:0030133 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 GO:GO:0042588 GO:GO:0018125 HOGENOM:HOG000233968
OrthoDB:EOG4TB4C6 CTD:9545 KO:K07884 OMA:GKGPTLG EMBL:M89777
EMBL:AF263365 EMBL:AF263366 EMBL:BC010779 EMBL:BC020010
IPI:IPI00116688 PIR:A45384 RefSeq:NP_114080.2 UniGene:Mm.260157
ProteinModelPortal:P35276 SMR:P35276 IntAct:P35276 STRING:P35276
PhosphoSite:P35276 PaxDb:P35276 PRIDE:P35276
Ensembl:ENSMUST00000115351 Ensembl:ENSMUST00000122211 GeneID:19340
KEGG:mmu:19340 InParanoid:P35276 NextBio:296343 Bgee:P35276
CleanEx:MM_RAB3D Genevestigator:P35276
GermOnline:ENSMUSG00000019066 Uniprot:P35276
Length = 219
Score = 160 (61.4 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 45/170 (26%), Positives = 81/170 (47%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+G+ +GKTSF+ +Y + + + G++ KT+ RI
Sbjct: 16 DQNFDYM-FKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQ 74
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR--KWNQTAIPILI 209
IWD G R + A+ L M+D+ ++ + ++ W ++ + W+ + IL+
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQV-ILV 133
Query: 210 GTKFD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 258
G K D + R+ P A R A + F +SA NINV ++F+
Sbjct: 134 GNKCDLEDERVVP------AEDGRRLADDLGFEFFEASAKENINVKQVFE 177
>UNIPROTKB|Q94986 [details] [associations]
symbol:rab-3 "Ras-related protein Rab-3" species:6239
"Caenorhabditis elegans" [GO:0006184 "GTP catabolic process"
evidence=ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0008021 GO:GO:0003924 GO:GO:0007617
GO:GO:0040017 GO:GO:0007271 GO:GO:0006935 GO:GO:0043051
GO:GO:0006887 PROSITE:PS51419 eggNOG:COG1100 EMBL:FO080599
KO:K07976 HOGENOM:HOG000233968 GeneTree:ENSGT00690000101942
EMBL:U68265 EMBL:U68266 EMBL:AB112928 RefSeq:NP_001021974.1
UniGene:Cel.19709 ProteinModelPortal:Q94986 SMR:Q94986
STRING:Q94986 PaxDb:Q94986 PRIDE:Q94986 EnsemblMetazoa:C18A3.6b.1
EnsemblMetazoa:C18A3.6b.2 GeneID:173971 KEGG:cel:CELE_C18A3.6
UCSC:C18A3.6a CTD:173971 WormBase:C18A3.6b NextBio:881917
ArrayExpress:Q94986 Uniprot:Q94986
Length = 219
Score = 160 (61.4 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 42/169 (24%), Positives = 82/169 (48%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ ++G+ +GKTSF+ +Y + + + G++ KT+ R+
Sbjct: 16 DQNFDYM-FKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQ 74
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWN-QTAIPILIG 210
IWD G R + A+ + M+D+T+ + NS+ W ++ + ++ + A +L+G
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVG 134
Query: 211 TKFDDFVRLPPDLQWTIAT-QARAYAKAMKATLFFSSATHNINVNKIFK 258
K D D + ++ + R A + F +SA NINV +F+
Sbjct: 135 NKCD------MDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFE 177
>UNIPROTKB|Q9ULW5 [details] [associations]
symbol:RAB26 "Ras-related protein Rab-26" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0030658 "transport vesicle
membrane" evidence=IEA] [GO:0035272 "exocrine system development"
evidence=ISS;IMP] [GO:0005525 "GTP binding" evidence=ISS;IMP]
[GO:0031226 "intrinsic to plasma membrane" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0017157
"regulation of exocytosis" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=IDA] [GO:0043001 "Golgi to plasma membrane
protein transport" evidence=IMP] [GO:0045055 "regulated secretory
pathway" evidence=IMP] [GO:0030667 "secretory granule membrane"
evidence=ISS] [GO:0019002 "GMP binding" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139 EMBL:CH471112
GO:GO:0031226 PROSITE:PS51419 GO:GO:0030667 GO:GO:0043001
eggNOG:COG1100 EMBL:AC009065 GO:GO:0045055 HOVERGEN:HBG009351
GO:GO:0017157 GO:GO:0019002 HOGENOM:HOG000233968 CTD:25837
KO:K07913 OMA:PSEPRFR OrthoDB:EOG4VMFG9 GO:GO:0035272 EMBL:AY646153
EMBL:BC066913 EMBL:AB027137 EMBL:AF498952 IPI:IPI00419883
RefSeq:NP_055168.2 UniGene:Hs.3797 PDB:2G6B PDBsum:2G6B
ProteinModelPortal:Q9ULW5 SMR:Q9ULW5 IntAct:Q9ULW5 STRING:Q9ULW5
PhosphoSite:Q9ULW5 DMDM:134044256 PaxDb:Q9ULW5 PRIDE:Q9ULW5
DNASU:25837 Ensembl:ENST00000210187 GeneID:25837 KEGG:hsa:25837
UCSC:uc002cou.3 GeneCards:GC16P002190 HGNC:HGNC:14259 HPA:HPA050223
MIM:605455 neXtProt:NX_Q9ULW5 PharmGKB:PA34116 InParanoid:Q9ULW5
PhylomeDB:Q9ULW5 ChiTaRS:RAB26 EvolutionaryTrace:Q9ULW5
GenomeRNAi:25837 NextBio:47147 ArrayExpress:Q9ULW5 Bgee:Q9ULW5
CleanEx:HS_RAB26 Genevestigator:Q9ULW5 GermOnline:ENSG00000167964
Uniprot:Q9ULW5
Length = 256
Score = 169 (64.5 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 46/154 (29%), Positives = 78/154 (50%)
Query: 65 RSSSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNE 124
RS + S PD G ++ R S G D V+ K+ L+GD +GKT +V++
Sbjct: 30 RSGTALS-GPDAPPNGPLQPGRP-SLGGGVDFYDVAFKVMLVGDSGVGKTCLLVRFKDGA 87
Query: 125 --QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIAC-KDAVAILFMFDL 181
+ G++ NK L V G ++ +WD G R F V A +DA A+L ++D+
Sbjct: 88 FLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQER-FRSVTHAYYRDAHALLLLYDV 146
Query: 182 TSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 214
T++ + ++I W +E ++ Q + + L+G K D
Sbjct: 147 TNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVD 180
>RGD|620890 [details] [associations]
symbol:Rab26 "RAB26, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=ISO;ISS]
[GO:0003924 "GTPase activity" evidence=TAS] [GO:0005525 "GTP
binding" evidence=IEA;ISO;IDA;TAS] [GO:0006184 "GTP catabolic
process" evidence=TAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0017157 "regulation of exocytosis" evidence=IDA]
[GO:0019002 "GMP binding" evidence=ISO;ISS] [GO:0030658 "transport
vesicle membrane" evidence=IEA] [GO:0030667 "secretory granule
membrane" evidence=ISS] [GO:0031226 "intrinsic to plasma membrane"
evidence=IDA] [GO:0035272 "exocrine system development"
evidence=ISO;IDA] [GO:0043001 "Golgi to plasma membrane protein
transport" evidence=ISO;ISS] [GO:0045055 "regulated secretory
pathway" evidence=ISO;ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620890 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0000139 GO:GO:0003924 GO:GO:0031226 PROSITE:PS51419
GO:GO:0030667 GO:GO:0043001 eggNOG:COG1100 GO:GO:0045055
HOVERGEN:HBG009351 GO:GO:0017157 GO:GO:0019002 HOGENOM:HOG000233968
CTD:25837 KO:K07913 GO:GO:0035272 EMBL:BC061984 EMBL:U18771
IPI:IPI00199248 PIR:JC2528 RefSeq:NP_598264.1 UniGene:Rn.10975
ProteinModelPortal:P51156 SMR:P51156 PhosphoSite:P51156
PRIDE:P51156 GeneID:171111 KEGG:rno:171111 UCSC:RGD:620890
NextBio:621820 ArrayExpress:P51156 Genevestigator:P51156
GermOnline:ENSRNOG00000003131 Uniprot:P51156
Length = 257
Score = 169 (64.5 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 72 PAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNE--QERSL 129
P P+ G + R G D V+ K+ L+GD +GKT +V++ +
Sbjct: 37 PGPEAPPNGPPQSGRPSLGGTGDFYD-VAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFI 95
Query: 130 QMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIAC-KDAVAILFMFDLTSRCTLN 188
G++ NK L V G ++ IWD G R F V A +DA A+L ++D+T++ + +
Sbjct: 96 STVGIDFRNKVLDVDGMKVKLQIWDTAGQER-FRSVTHAYYRDAHALLLLYDITNKDSFD 154
Query: 189 SIVGWYSEARKW-NQTAIPILIGTKFD 214
+I W +E +++ Q + +L+G K D
Sbjct: 155 NIQAWLTEIQEYAQQDVVLMLLGNKVD 181
>UNIPROTKB|P51156 [details] [associations]
symbol:Rab26 "Ras-related protein Rab-26" species:10116
"Rattus norvegicus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620890 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0000139 GO:GO:0003924 GO:GO:0031226 PROSITE:PS51419
GO:GO:0030667 GO:GO:0043001 eggNOG:COG1100 GO:GO:0045055
HOVERGEN:HBG009351 GO:GO:0017157 GO:GO:0019002 HOGENOM:HOG000233968
CTD:25837 KO:K07913 GO:GO:0035272 EMBL:BC061984 EMBL:U18771
IPI:IPI00199248 PIR:JC2528 RefSeq:NP_598264.1 UniGene:Rn.10975
ProteinModelPortal:P51156 SMR:P51156 PhosphoSite:P51156
PRIDE:P51156 GeneID:171111 KEGG:rno:171111 UCSC:RGD:620890
NextBio:621820 ArrayExpress:P51156 Genevestigator:P51156
GermOnline:ENSRNOG00000003131 Uniprot:P51156
Length = 257
Score = 169 (64.5 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 72 PAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNE--QERSL 129
P P+ G + R G D V+ K+ L+GD +GKT +V++ +
Sbjct: 37 PGPEAPPNGPPQSGRPSLGGTGDFYD-VAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFI 95
Query: 130 QMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIAC-KDAVAILFMFDLTSRCTLN 188
G++ NK L V G ++ IWD G R F V A +DA A+L ++D+T++ + +
Sbjct: 96 STVGIDFRNKVLDVDGMKVKLQIWDTAGQER-FRSVTHAYYRDAHALLLLYDITNKDSFD 154
Query: 189 SIVGWYSEARKW-NQTAIPILIGTKFD 214
+I W +E +++ Q + +L+G K D
Sbjct: 155 NIQAWLTEIQEYAQQDVVLMLLGNKVD 181
>DICTYBASE|DDB_G0282847 [details] [associations]
symbol:rab5B "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
dictyBase:DDB_G0282847 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HSSP:P20339
RefSeq:XP_639358.1 ProteinModelPortal:Q54RX9 PRIDE:Q54RX9
EnsemblProtists:DDB0229394 GeneID:8623798 KEGG:ddi:DDB_G0282847
OMA:GQNINEL Uniprot:Q54RX9
Length = 214
Score = 157 (60.3 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 47/166 (28%), Positives = 76/166 (45%)
Query: 102 KISLLGDCQIGKTSFVVKYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRS 161
K+ LLG+ GKT + V NE + G + K+++V I IWD G R
Sbjct: 51 KLVLLGEMNTGKTCISSRLVRNEFGPTDSTIGAAFLVKSMVVDNINIKLEIWDTAGQERY 110
Query: 162 FDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFDDFVRLP 220
P+ + A A + ++D+T + T ++ W SE +K + I L G K D LP
Sbjct: 111 RSLTPMYYRGAAAAVVVYDITKKNTFETLKRWVSELQKHASPNLILALAGNKVD----LP 166
Query: 221 P-DLQWTIATQARAYAKAMKATLFF-SSATHNINVNKIFKFIMAKL 264
++Q + Y + +FF +SA N+N++F I +L
Sbjct: 167 NREVQ---VDEVNRYISELGNAIFFETSAASGQNINELFTEICRRL 209
>UNIPROTKB|F1N908 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0005546 "phosphatidylinositol-4,5-bisphosphate
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0016197 "endosomal
transport" evidence=IEA] [GO:0031253 "cell projection membrane"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0045334 "clathrin-coated endocytic vesicle" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0005905 GO:GO:0016197 GO:GO:0000910 GO:GO:0005546
GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 OMA:NCDVVNR EMBL:AADN02043195
EMBL:AADN02043196 IPI:IPI00651222 Ensembl:ENSGALT00000011828
Uniprot:F1N908
Length = 201
Score = 157 (60.3 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 40/160 (25%), Positives = 75/160 (46%)
Query: 102 KISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
K+ ++GD +GK+S ++++ N + G++ +T+ + G ++ IWD G R
Sbjct: 10 KLLIIGDSGVGKSSLLLRFADNTFSGDYITTIGVDFKIRTVEINGEKVKLQIWDTAGQER 69
Query: 161 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLP 220
+ ++ ++D+TS + ++ W E + IL+G K DD
Sbjct: 70 FRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDD----- 124
Query: 221 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 260
P+ + A +A M+ LF +SA NINV ++F I
Sbjct: 125 PERKVVETEDAYKFAGQMEIQLFETSAKENINVEEMFNCI 164
>UNIPROTKB|F1NHE8 [details] [associations]
symbol:LOC425531 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104044 EMBL:AADN02070134 IPI:IPI00593471
ProteinModelPortal:F1NHE8 Ensembl:ENSGALT00000007522 OMA:KPDREVE
Uniprot:F1NHE8
Length = 212
Score = 157 (60.3 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 44/182 (24%), Positives = 82/182 (45%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARI 148
SG D D +++K+ L+GD +GK+S ++++ E SL+ ++ K ++V G +
Sbjct: 5 SGRDMDGAGITVKLILIGDSAVGKSSLLLRFAEGSFEPSLKPTICVDFKVKKMVVDGHTV 64
Query: 149 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWN--QTAIP 206
+IWD G R P + I+ ++D+T + T + W +E +N +
Sbjct: 65 QLAIWDTAGQERFRTLNPSYYRGTQGIVLVYDVTRKDTFTGLDSWLNELEIYNTKSNTVK 124
Query: 207 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 266
+L+G K D PD + + +AK +SA V F+ ++ K+
Sbjct: 125 MLVGNKTDK-----PDRE-VERREGLQFAKKRSLLFIETSAKTEDGVQHAFEELVIKILQ 178
Query: 267 LP 268
P
Sbjct: 179 TP 180
>UNIPROTKB|F1P278 [details] [associations]
symbol:RAB19 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104044 OMA:RNSLHLY
EMBL:AADN02006362 IPI:IPI00604193 Ensembl:ENSGALT00000020960
Uniprot:F1P278
Length = 212
Score = 157 (60.3 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 51/178 (28%), Positives = 78/178 (43%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKY-VGNEQERSLQMAGLNLINKTLMVQGA 146
FSS D+ KI L+GD +GKT V ++ G E+ G++ +++ + G
Sbjct: 1 FSSSSADDAFDYLFKIILIGDSNVGKTCVVHRFKTGQFYEKQQNTIGVDFTVRSMDIDGK 60
Query: 147 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQT-AI 205
++ +WD G R + A + +DLT R T SI W E K+ +
Sbjct: 61 KVKIQVWDTAGQERFRTITQSYYRSAHGAILAYDLTRRSTFESIPHWVHEVEKYGAANLV 120
Query: 206 PILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAK 263
+LIG K D V L T A Y + A L +SA N+ ++F +MAK
Sbjct: 121 MMLIGNKSDS-VDKRQVLFEDACTLAEKYG--LLAVLE-TSAKEAQNIEEVF-VLMAK 173
>UNIPROTKB|F1MSJ9 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045334 "clathrin-coated endocytic vesicle"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0031253 "cell projection membrane" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0005905 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 OMA:NCDVVNR EMBL:DAAA02045445
IPI:IPI01028002 UniGene:Bt.26843 Ensembl:ENSBTAT00000029514
Uniprot:F1MSJ9
Length = 201
Score = 157 (60.3 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 40/160 (25%), Positives = 75/160 (46%)
Query: 102 KISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
K+ ++GD +GK+S ++++ N S + G++ +T+ + G ++ IWD G R
Sbjct: 10 KLVIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQER 69
Query: 161 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLP 220
+ ++ ++D+TS + ++ W E + IL+G K DD
Sbjct: 70 FRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDD----- 124
Query: 221 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 260
P+ + A +A M LF +SA N+NV ++F I
Sbjct: 125 PERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCI 164
>UNIPROTKB|Q15286 [details] [associations]
symbol:RAB35 "Ras-related protein Rab-35" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0042470 "melanosome" evidence=IEA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0045334 "clathrin-coated endocytic
vesicle" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0008104 "protein localization" evidence=IMP] [GO:0045171
"intercellular bridge" evidence=IDA] [GO:0005905 "coated pit"
evidence=IDA] [GO:0031253 "cell projection membrane" evidence=IDA]
[GO:0005546 "phosphatidylinositol-4,5-bisphosphate binding"
evidence=IDA] [GO:0019003 "GDP binding" evidence=IDA] [GO:0005525
"GTP binding" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0042470 GO:GO:0007264
GO:GO:0008104 GO:GO:0015031 GO:GO:0005768 GO:GO:0003924
GO:GO:0005905 EMBL:CH471054 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
EMBL:AC004812 GO:GO:0045171 HOVERGEN:HBG009351 GO:GO:0045334
PDB:3TW8 PDBsum:3TW8 GO:GO:0031253 HOGENOM:HOG000233968 EMBL:X79781
EMBL:AF498960 EMBL:BT020024 EMBL:CR536486 EMBL:CR541683
EMBL:AK304620 EMBL:AK312538 EMBL:BC015931 IPI:IPI00300096
IPI:IPI00953892 PIR:JC2488 RefSeq:NP_001161078.1 RefSeq:NP_006852.1
UniGene:Hs.524788 ProteinModelPortal:Q15286 SMR:Q15286
IntAct:Q15286 MINT:MINT-1370578 STRING:Q15286 PhosphoSite:Q15286
DMDM:3024525 PaxDb:Q15286 PRIDE:Q15286 DNASU:11021
Ensembl:ENST00000229340 Ensembl:ENST00000534951 GeneID:11021
KEGG:hsa:11021 UCSC:uc001txm.2 CTD:11021 GeneCards:GC12M120532
HGNC:HGNC:9774 MIM:604199 neXtProt:NX_Q15286 PharmGKB:PA34127
InParanoid:Q15286 KO:K07876 OMA:NCDVVNR OrthoDB:EOG4QVCD5
GenomeRNAi:11021 NextBio:41874 ArrayExpress:Q15286 Bgee:Q15286
CleanEx:HS_RAB35 Genevestigator:Q15286 GermOnline:ENSG00000111737
Uniprot:Q15286
Length = 201
Score = 157 (60.3 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 40/160 (25%), Positives = 75/160 (46%)
Query: 102 KISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
K+ ++GD +GK+S ++++ N S + G++ +T+ + G ++ IWD G R
Sbjct: 10 KLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQER 69
Query: 161 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLP 220
+ ++ ++D+TS + ++ W E + IL+G K DD
Sbjct: 70 FRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDD----- 124
Query: 221 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 260
P+ + A +A M LF +SA N+NV ++F I
Sbjct: 125 PERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCI 164
>UNIPROTKB|F2Z4Z0 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045334 "clathrin-coated endocytic vesicle"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0031253 "cell projection membrane" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0005905 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
EMBL:CU062612 RefSeq:NP_001230220.1 UniGene:Ssc.17391
UniGene:Ssc.99380 ProteinModelPortal:F2Z4Z0 SMR:F2Z4Z0 PRIDE:F2Z4Z0
Ensembl:ENSSSCT00000010847 GeneID:100151805 KEGG:ssc:100151805
Uniprot:F2Z4Z0
Length = 201
Score = 157 (60.3 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 40/160 (25%), Positives = 75/160 (46%)
Query: 102 KISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
K+ ++GD +GK+S ++++ N S + G++ +T+ + G ++ IWD G R
Sbjct: 10 KLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQER 69
Query: 161 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLP 220
+ ++ ++D+TS + ++ W E + IL+G K DD
Sbjct: 70 FRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDD----- 124
Query: 221 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 260
P+ + A +A M LF +SA N+NV ++F I
Sbjct: 125 PERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCI 164
>UNIPROTKB|I3LSL6 [details] [associations]
symbol:I3LSL6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104031 OMA:PSEPRFR
EMBL:FP102350 Ensembl:ENSSSCT00000024607 Uniprot:I3LSL6
Length = 192
Score = 157 (60.3 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 36/117 (30%), Positives = 64/117 (54%)
Query: 102 KISLLGDCQIGKTSFVVKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 159
++ L+GD +GKT +V++ + G++ NK L V G ++ IWD G
Sbjct: 1 QVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKILDVDGMKVKLQIWDTAGQE 60
Query: 160 RSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQT-AIPILIGTKFD 214
R F V A +DA A+L ++D+T++ + +SI W +E +++ Q + +L+G K D
Sbjct: 61 R-FRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEYAQRDVVLLLLGNKVD 116
>MGI|MGI:1924657 [details] [associations]
symbol:Rab35 "RAB35, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0005525
"GTP binding" evidence=ISO] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005905 "coated pit" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016197 "endosomal
transport" evidence=ISO] [GO:0019003 "GDP binding" evidence=ISO]
[GO:0031253 "cell projection membrane" evidence=ISO] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0045171 "intercellular
bridge" evidence=ISO] [GO:0045334 "clathrin-coated endocytic
vesicle" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:1924657 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0042470 GO:GO:0007264 GO:GO:0015031 GO:GO:0005768
GO:GO:0005905 GO:GO:0016197 GO:GO:0000910 GO:GO:0005546
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003 GO:GO:0045171
HOVERGEN:HBG009351 GO:GO:0045334 GO:GO:0031253 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
OrthoDB:EOG4QVCD5 EMBL:BC056466 IPI:IPI00130489 RefSeq:NP_937806.1
UniGene:Mm.27553 ProteinModelPortal:Q6PHN9 SMR:Q6PHN9 IntAct:Q6PHN9
STRING:Q6PHN9 PhosphoSite:Q6PHN9 PaxDb:Q6PHN9 PRIDE:Q6PHN9
Ensembl:ENSMUST00000031492 GeneID:77407 KEGG:mmu:77407
InParanoid:Q6PHN9 ChiTaRS:RAB35 NextBio:346877 Bgee:Q6PHN9
CleanEx:MM_RAB35 Genevestigator:Q6PHN9
GermOnline:ENSMUSG00000029518 Uniprot:Q6PHN9
Length = 201
Score = 157 (60.3 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 40/160 (25%), Positives = 75/160 (46%)
Query: 102 KISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
K+ ++GD +GK+S ++++ N S + G++ +T+ + G ++ IWD G R
Sbjct: 10 KLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQER 69
Query: 161 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLP 220
+ ++ ++D+TS + ++ W E + IL+G K DD
Sbjct: 70 FRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDD----- 124
Query: 221 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 260
P+ + A +A M LF +SA N+NV ++F I
Sbjct: 125 PERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCI 164
>POMBASE|SPAC18G6.03 [details] [associations]
symbol:ypt3 "GTPase Ypt3" species:4896
"Schizosaccharomyces pombe" [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISM] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=TAS]
[GO:0006887 "exocytosis" evidence=IMP] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IC] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0033205 "cell cycle cytokinesis"
evidence=IMP] [GO:0042144 "vacuole fusion, non-autophagic"
evidence=IMP] [GO:0071852 "fungal-type cell wall organization or
biogenesis" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
PomBase:SPAC18G6.03 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0006886 GO:GO:0007264
GO:GO:0000139 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003924
GO:GO:0010008 GO:GO:0006887 PROSITE:PS51419 GO:GO:0033205
eggNOG:COG1100 GO:GO:0042144 GO:GO:0071852 KO:K07976
HOGENOM:HOG000233968 OMA:QKQIRDS OrthoDB:EOG41K2ND EMBL:X52100
EMBL:X52732 PIR:S10026 RefSeq:NP_593667.1 ProteinModelPortal:P17610
SMR:P17610 STRING:P17610 PRIDE:P17610 EnsemblFungi:SPAC18G6.03.1
GeneID:2542219 KEGG:spo:SPAC18G6.03 NextBio:20803288 Uniprot:P17610
Length = 214
Score = 157 (60.3 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 44/181 (24%), Positives = 87/181 (48%)
Query: 102 KISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
K L+GD +GK++ ++++ NE S G+ + +++ +I IWD G R
Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71
Query: 161 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVRL 219
+ AV L ++D+T + + +++ W E R+ + I I L+G K D + L
Sbjct: 72 YRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNK-TDLLHL 130
Query: 220 PPDLQWTIATQ-ARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIG 278
++T+ A+A+A + +SA NV + F+ ++ ++F + R+L G
Sbjct: 131 R-----AVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRI--VSNRSLEAG 183
Query: 279 E 279
+
Sbjct: 184 D 184
>RGD|1306362 [details] [associations]
symbol:Rab35 "RAB35, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000910 "cytokinesis" evidence=IEA;ISO]
[GO:0005525 "GTP binding" evidence=ISO;ISS] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA;ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005768
"endosome" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0005905 "coated pit" evidence=IEA;ISO]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA;ISO] [GO:0019003 "GDP binding"
evidence=ISO;ISS] [GO:0031253 "cell projection membrane"
evidence=IEA;ISO] [GO:0042470 "melanosome" evidence=IEA]
[GO:0045171 "intercellular bridge" evidence=IEA;ISO] [GO:0045334
"clathrin-coated endocytic vesicle" evidence=IEA;ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:1306362 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0042470 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0005905 GO:GO:0016197
GO:GO:0000910 GO:GO:0005546 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045171 HOVERGEN:HBG009351 GO:GO:0045334
GO:GO:0031253 HOGENOM:HOG000233968 GeneTree:ENSGT00700000104049
CTD:11021 KO:K07876 OrthoDB:EOG4QVCD5 EMBL:BC085769 IPI:IPI00371187
RefSeq:NP_001013064.1 UniGene:Rn.18008 ProteinModelPortal:Q5U316
SMR:Q5U316 STRING:Q5U316 PhosphoSite:Q5U316 PRIDE:Q5U316
Ensembl:ENSRNOT00000030031 GeneID:288700 KEGG:rno:288700
UCSC:RGD:1306362 InParanoid:Q5U316 NextBio:628573
Genevestigator:Q5U316 GermOnline:ENSRNOG00000022014 Uniprot:Q5U316
Length = 201
Score = 157 (60.3 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 40/160 (25%), Positives = 75/160 (46%)
Query: 102 KISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
K+ ++GD +GK+S ++++ N S + G++ +T+ + G ++ IWD G R
Sbjct: 10 KLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQER 69
Query: 161 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLP 220
+ ++ ++D+TS + ++ W E + IL+G K DD
Sbjct: 70 FRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDD----- 124
Query: 221 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 260
P+ + A +A M LF +SA N+NV ++F I
Sbjct: 125 PERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCI 164
>TAIR|locus:2140079 [details] [associations]
symbol:RABA4B "RAB GTPase homolog A4B" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019900 "kinase binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0032456 "endocytic recycling"
evidence=IDA] [GO:0031901 "early endosome membrane" evidence=IDA]
[GO:0032588 "trans-Golgi network membrane" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0031901 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0032588
GO:GO:0015031 PROSITE:PS51419 EMBL:AL161596 GO:GO:0032456
eggNOG:COG1100 EMBL:AL035708 KO:K07976 HOGENOM:HOG000233968
HSSP:P07560 ProtClustDB:CLSN2685897 EMBL:U46926 EMBL:AY072448
EMBL:AY128914 EMBL:AY088624 IPI:IPI00516291 PIR:T06105
RefSeq:NP_195709.1 UniGene:At.1649 UniGene:At.48966
ProteinModelPortal:Q9SMQ6 SMR:Q9SMQ6 STRING:Q9SMQ6 PaxDb:Q9SMQ6
PRIDE:Q9SMQ6 EnsemblPlants:AT4G39990.1 GeneID:830160
KEGG:ath:AT4G39990 TAIR:At4g39990 InParanoid:Q9SMQ6 OMA:FEHIPRW
PhylomeDB:Q9SMQ6 Genevestigator:Q9SMQ6 Uniprot:Q9SMQ6
Length = 224
Score = 162 (62.1 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 57/193 (29%), Positives = 90/193 (46%)
Query: 91 GYDTDSDLVS--LKISLLGDCQIGKTSFVVKYVGNEQER-SLQMAGLNLINKTLMVQGAR 147
GY S V K+ L+GD +GK+ + ++ +E S G+ +TL ++
Sbjct: 6 GYGGASGKVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKS 65
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIP 206
I IWD G R + AV + ++D+T R T I W E R ++ +
Sbjct: 66 IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVI 125
Query: 207 ILIGTKFDDFVRLPPDLQWTIATQ-ARAYAKAMKATLFF--SSATHNINVNKIFKFIMAK 263
ILIG K D + Q + T+ A+ +A+ K LFF +SA + NV F +M +
Sbjct: 126 ILIGNKSD------LEDQRAVPTEDAKEFAE--KEGLFFLETSALNATNVENSFNTLMTQ 177
Query: 264 LFNLPWTV-KRNL 275
++N TV K+NL
Sbjct: 178 IYN---TVNKKNL 187
>ASPGD|ASPL0000074235 [details] [associations]
symbol:srgG species:162425 "Emericella nidulans"
[GO:0005525 "GTP binding" evidence=IDA] [GO:0005769 "early
endosome" evidence=IDA] [GO:0005770 "late endosome" evidence=IDA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0006184
"GTP catabolic process" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006623 "protein targeting to vacuole"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0000011
"vacuole inheritance" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 EMBL:BN001303 eggNOG:COG1100 EMBL:AACD01000084
KO:K07976 HOGENOM:HOG000233968 OMA:RTIKYEI OrthoDB:EOG47WRXZ
RefSeq:XP_662519.1 ProteinModelPortal:Q5B3G5 SMR:Q5B3G5
EnsemblFungi:CADANIAT00005485 GeneID:2872716 KEGG:ani:AN4915.2
Uniprot:Q5B3G5
Length = 258
Score = 158 (60.7 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 36/117 (30%), Positives = 59/117 (50%)
Query: 100 SLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 158
S+K+ LLG+ +GK+S V+++V N+ QE G + + + I F IWD G
Sbjct: 15 SVKLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCSLPSRTIKFEIWDTAGQ 74
Query: 159 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 214
R P+ ++A A L ++D+T +L W +E ++ I I L+G K D
Sbjct: 75 ERFASLAPMYYRNAQAALVVYDVTKPSSLTKAKHWVAELQRQASPGIVIALVGNKLD 131
Score = 43 (20.2 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 220 PPDLQWTIATQARAYAKAMKATLFF-SSATHNINVNKIFKFI 260
P D + +A YA + LFF +SA +NV +F I
Sbjct: 166 PGDARKVPTREASTYADE-EGLLFFETSAKTGLNVTDVFTAI 206
>UNIPROTKB|F1N8I9 [details] [associations]
symbol:RAB6A "Ras-related protein Rab-6A" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00600000084341 IPI:IPI00571478 OMA:TTKWIED
EMBL:AADN02055116 EMBL:AADN02055117 EMBL:AADN02055118
EMBL:AADN02055119 EMBL:AADN02055120 Ensembl:ENSGALT00000031276
Uniprot:F1N8I9
Length = 175
Score = 156 (60.0 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 41/176 (23%), Positives = 81/176 (46%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGAR 147
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 2 SAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT 61
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIP 206
+ +WD G R +P +D+ + ++D+T+ + W + R + I
Sbjct: 62 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVII 121
Query: 207 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMA 262
+L+G K D L Q +I R AK + +SA NV ++ + A
Sbjct: 122 MLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQVSNALAA 172
>RGD|1565300 [details] [associations]
symbol:Rab43 "RAB43, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=ISO;ISS]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISO;ISS] [GO:0006184 "GTP catabolic process"
evidence=ISO;ISS] [GO:0007030 "Golgi organization"
evidence=ISO;ISS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0035526 "retrograde transport, plasma membrane to
Golgi" evidence=ISO;ISS] [GO:0045335 "phagocytic vesicle"
evidence=ISO;ISS] [GO:0090382 "phagosome maturation"
evidence=ISO;ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:1565300 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 OrthoDB:EOG4WQ13N CTD:339122 KO:K07930
OMA:LIGDCGT EMBL:AY593256 IPI:IPI00204737 RefSeq:NP_001019502.1
UniGene:Rn.141443 ProteinModelPortal:Q53B90 SMR:Q53B90 PRIDE:Q53B90
Ensembl:ENSRNOT00000013299 GeneID:500249 KEGG:rno:500249
UCSC:RGD:1565300 InParanoid:Q53B90 NextBio:705573
Genevestigator:Q53B90 GermOnline:ENSRNOG00000037768 Uniprot:Q53B90
Length = 210
Score = 156 (60.0 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 45/166 (27%), Positives = 74/166 (44%)
Query: 102 KISLLGDCQIGKTSFVVKY-VGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
K+ L+GD +GKT V ++ G R G++ KTL +QG R+ IWD G R
Sbjct: 18 KLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQER 77
Query: 161 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFDDFVRL 219
+ A + +D++ R T S+ W + RK+ + +LIG K D
Sbjct: 78 FRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSD----- 132
Query: 220 PPDLQWTIATQARAYAKAMKATLFF-SSATHNINVNKIFKFIMAKL 264
DL+ +A++ A+ +SA + NV + F + +L
Sbjct: 133 LADLREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATEL 178
>TAIR|locus:2102777 [details] [associations]
symbol:RABA2c "RAB GTPase homolog A2C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0009504
"cell plate" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0005794 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0007264 GO:GO:0015031 GO:GO:0005768
GO:GO:0010008 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0009504
EMBL:AL096859 KO:K07976 HOGENOM:HOG000233968 EMBL:Y08904
EMBL:AY065380 EMBL:AY096545 EMBL:AY087450 IPI:IPI00527142
PIR:T12965 RefSeq:NP_190267.1 UniGene:At.109 UniGene:At.73032
ProteinModelPortal:Q96283 SMR:Q96283 PaxDb:Q96283 PRIDE:Q96283
EnsemblPlants:AT3G46830.1 GeneID:823836 KEGG:ath:AT3G46830
TAIR:At3g46830 InParanoid:Q96283 OMA:PQGTTIN PhylomeDB:Q96283
ProtClustDB:PLN03110 Genevestigator:Q96283 GermOnline:AT3G46830
Uniprot:Q96283
Length = 217
Score = 158 (60.7 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 45/177 (25%), Positives = 83/177 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQ-ERSLQMAGLNLINKTLMVQGARIAFS 151
D + D + KI L+GD +GK++ + ++ NE S G+ +T V+G I
Sbjct: 6 DQEYDYL-FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQ 64
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGT 211
IWD G R + AV L ++D+T R T ++++ W E R + I I++
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAG 124
Query: 212 KFDDFVRLPPDLQWTIATQ-ARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
D L ++A + ++ A+ + +SA NV K F+ I+ +++++
Sbjct: 125 NKSDLNHLR-----SVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHI 176
>MGI|MGI:2443284 [details] [associations]
symbol:Rab26 "RAB26, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0017157 "regulation of exocytosis" evidence=ISO] [GO:0019002
"GMP binding" evidence=ISO] [GO:0031226 "intrinsic to plasma
membrane" evidence=ISO] [GO:0035272 "exocrine system development"
evidence=ISO] [GO:0043001 "Golgi to plasma membrane protein
transport" evidence=ISO] [GO:0045055 "regulated secretory pathway"
evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:2443284 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0000139 GO:GO:0031226 PROSITE:PS51419 GO:GO:0030667
GO:GO:0043001 eggNOG:COG1100 GO:GO:0045055 HOVERGEN:HBG009351
GO:GO:0017157 GO:GO:0019002 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104031 CTD:25837 KO:K07913 GO:GO:0035272
ChiTaRS:RAB26 EMBL:BC094931 IPI:IPI00671283 RefSeq:NP_796349.1
UniGene:Mm.266033 ProteinModelPortal:Q504M8 SMR:Q504M8
STRING:Q504M8 PhosphoSite:Q504M8 PaxDb:Q504M8 PRIDE:Q504M8
Ensembl:ENSMUST00000035797 GeneID:328778 KEGG:mmu:328778
InParanoid:Q504M8 NextBio:398424 Bgee:Q504M8 CleanEx:MM_RAB26
Genevestigator:Q504M8 GermOnline:ENSMUSG00000052752 Uniprot:Q504M8
Length = 260
Score = 168 (64.2 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 44/147 (29%), Positives = 75/147 (51%)
Query: 72 PAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNE--QERSL 129
P P+ G + R S G D V+ K+ L+GD +GKT +V++ +
Sbjct: 40 PGPEAPPNGPPQSIRP-SLGSTGDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFI 98
Query: 130 QMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIAC-KDAVAILFMFDLTSRCTLN 188
G++ NK L V G ++ IWD G R F V A +DA A+L ++D+T++ + +
Sbjct: 99 STVGIDFRNKVLDVDGMKVKLQIWDTAGQER-FRSVTHAYYRDAHALLLLYDITNKDSFD 157
Query: 189 SIVGWYSEARKW-NQTAIPILIGTKFD 214
+I W +E +++ Q + +L+G K D
Sbjct: 158 NIQAWLTEIQEYAQQDVVLMLLGNKVD 184
>CGD|CAL0002519 [details] [associations]
symbol:SEC4 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=IGI;ISS] [GO:0006906 "vesicle fusion"
evidence=IGI] [GO:0006903 "vesicle targeting" evidence=IGI]
[GO:0000131 "incipient cellular bud site" evidence=IDA] [GO:0005934
"cellular bud tip" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0006887 "exocytosis" evidence=IMP] [GO:0009306
"protein secretion" evidence=IMP] [GO:0006893 "Golgi to plasma
membrane transport" evidence=IMP] [GO:0031521 "spitzenkorper"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0031321 "ascospore-type prospore
assembly" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0007107 "membrane addition at site of cytokinesis"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
CGD:CAL0002519 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0005934 GO:GO:0003924 GO:GO:0009306
GO:GO:0035690 GO:GO:0006887 PROSITE:PS51419 GO:GO:0030658
GO:GO:0006903 GO:GO:0006893 EMBL:AACQ01000044 EMBL:AACQ01000043
GO:GO:0000131 GO:GO:0006906 GO:GO:0031521 KO:K07901
RefSeq:XP_718237.1 RefSeq:XP_718333.1 ProteinModelPortal:P0CY31
SMR:P0CY31 PRIDE:P0CY31 GeneID:3640032 GeneID:3640119
KEGG:cal:CaO19.10103 KEGG:cal:CaO19.2571 Uniprot:P0CY31
Length = 210
Score = 155 (59.6 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 46/174 (26%), Positives = 85/174 (48%)
Query: 90 SGYDTDS---DLVSLKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQG 145
SG T S D++ +K+ L+GD +GK+ ++++V ++ S + G++ +T+ +G
Sbjct: 2 SGKGTSSRAYDMI-MKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKG 60
Query: 146 ARIAFSIWDVGGDSRSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQT 203
RI +WD G R F + A + A+ I+ ++D+T + ++ W+ + N+
Sbjct: 61 KRIKLQVWDTAGQER-FRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANED 119
Query: 204 AIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
A L+G K DD V + Q + A + +SA N NV+ IF
Sbjct: 120 AQIFLVGNKCDDEVNRQVSKE-----QGQELAAKLNVPFLEASAKSNENVDSIF 168
>UNIPROTKB|P0CY31 [details] [associations]
symbol:SEC4 "Ras-related protein SEC4" species:237561
"Candida albicans SC5314" [GO:0000131 "incipient cellular bud site"
evidence=IDA] [GO:0003924 "GTPase activity" evidence=IGI;ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005934 "cellular
bud tip" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IGI;ISS] [GO:0006887 "exocytosis" evidence=IMP]
[GO:0006893 "Golgi to plasma membrane transport" evidence=IMP]
[GO:0006903 "vesicle targeting" evidence=IGI] [GO:0006906 "vesicle
fusion" evidence=IGI] [GO:0009306 "protein secretion" evidence=IMP]
[GO:0031521 "spitzenkorper" evidence=IDA] [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 CGD:CAL0002519 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0005934 GO:GO:0003924
GO:GO:0009306 GO:GO:0035690 GO:GO:0006887 PROSITE:PS51419
GO:GO:0030658 GO:GO:0006903 GO:GO:0006893 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0000131 GO:GO:0006906 GO:GO:0031521
KO:K07901 RefSeq:XP_718237.1 RefSeq:XP_718333.1
ProteinModelPortal:P0CY31 SMR:P0CY31 PRIDE:P0CY31 GeneID:3640032
GeneID:3640119 KEGG:cal:CaO19.10103 KEGG:cal:CaO19.2571
Uniprot:P0CY31
Length = 210
Score = 155 (59.6 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 46/174 (26%), Positives = 85/174 (48%)
Query: 90 SGYDTDS---DLVSLKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQG 145
SG T S D++ +K+ L+GD +GK+ ++++V ++ S + G++ +T+ +G
Sbjct: 2 SGKGTSSRAYDMI-MKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKG 60
Query: 146 ARIAFSIWDVGGDSRSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQT 203
RI +WD G R F + A + A+ I+ ++D+T + ++ W+ + N+
Sbjct: 61 KRIKLQVWDTAGQER-FRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANED 119
Query: 204 AIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
A L+G K DD V + Q + A + +SA N NV+ IF
Sbjct: 120 AQIFLVGNKCDDEVNRQVSKE-----QGQELAAKLNVPFLEASAKSNENVDSIF 168
>WB|WBGene00004284 [details] [associations]
symbol:rab-35 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:AL117202 HOGENOM:HOG000233968 HSSP:P07560
GeneTree:ENSGT00700000104049 KO:K07876 OMA:NCDVVNR PIR:T31551
RefSeq:NP_499454.1 ProteinModelPortal:Q9U2C3 SMR:Q9U2C3
STRING:Q9U2C3 EnsemblMetazoa:Y47D3A.25.1 EnsemblMetazoa:Y47D3A.25.2
GeneID:176560 KEGG:cel:CELE_Y47D3A.25 UCSC:Y47D3A.25.2 CTD:176560
WormBase:Y47D3A.25 InParanoid:Q9U2C3 NextBio:893084
ArrayExpress:Q9U2C3 Uniprot:Q9U2C3
Length = 209
Score = 155 (59.6 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 37/160 (23%), Positives = 77/160 (48%)
Query: 102 KISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
K+ ++GD +GK+S ++++ N E + G++ +T+ + G R+ IWD G R
Sbjct: 12 KLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAGQER 71
Query: 161 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLP 220
+ ++ ++D+T+ + ++ W E + +L+G K ++ R
Sbjct: 72 FRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNCDSVQKVLVGNKCEENER-- 129
Query: 221 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 260
+ + + AR YA++M + F +SA + NV +F I
Sbjct: 130 ---RVVLESDARNYAQSMNISFFETSAKEDKNVEPMFTCI 166
>TAIR|locus:2082269 [details] [associations]
symbol:RABA4D "RAB GTPase homolog A4D" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0009860 "pollen tube growth"
evidence=RCA;IDA] [GO:0045177 "apical part of cell" evidence=IDA]
[GO:0070382 "exocytic vesicle" evidence=IDA] [GO:0048868 "pollen
tube development" evidence=IGI;RCA] [GO:0019900 "kinase binding"
evidence=IPI] [GO:0080092 "regulation of pollen tube growth"
evidence=IMP] [GO:0090404 "pollen tube tip" evidence=IDA]
[GO:0009827 "plant-type cell wall modification" evidence=RCA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA] [GO:0048610
"cellular process involved in reproduction" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0007264 EMBL:AC069473 GO:GO:0015031 GO:GO:0045177
GO:GO:0009860 GO:GO:0030659 EMBL:AP002063 PROSITE:PS51419
GO:GO:0070382 EMBL:AC069472 GO:GO:0090404 eggNOG:COG1100
GO:GO:0080092 KO:K07976 HOGENOM:HOG000233968 HSSP:P20339
EMBL:DQ056590 IPI:IPI00520600 RefSeq:NP_187823.1 UniGene:At.53275
ProteinModelPortal:Q9LH50 SMR:Q9LH50 STRING:Q9LH50 PaxDb:Q9LH50
PRIDE:Q9LH50 EnsemblPlants:AT3G12160.1 GeneID:820393
KEGG:ath:AT3G12160 TAIR:At3g12160 InParanoid:Q9LH50 OMA:RTDEDYN
PhylomeDB:Q9LH50 ProtClustDB:CLSN2684593 Genevestigator:Q9LH50
Uniprot:Q9LH50
Length = 222
Score = 160 (61.4 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 52/197 (26%), Positives = 89/197 (45%)
Query: 92 YDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAF 150
Y+ D V K+ L+GD +GKT + ++ NE S G+ KTL++ +
Sbjct: 8 YNQKIDYV-FKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKA 66
Query: 151 SIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILI 209
IWD G R + AV + ++D+T R + + + W E R ++ + +LI
Sbjct: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLI 126
Query: 210 GTKFD-DFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKLFN 266
G K D +R P A+ +A+ + LFF +SA NV F I+ +++
Sbjct: 127 GNKCDLGSLRAVP------TEDAQEFAQ--RENLFFMETSALEATNVETAFLTILTEIYR 178
Query: 267 LPWTVKRNLTIGEPIID 283
+ K++LT + D
Sbjct: 179 I--ISKKSLTADDDDAD 193
>UNIPROTKB|F1N8D8 [details] [associations]
symbol:RAB26 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104031 EMBL:AADN02023658
EMBL:AADN02023659 IPI:IPI00594309 ProteinModelPortal:F1N8D8
Ensembl:ENSGALT00000009235 Uniprot:F1N8D8
Length = 159
Score = 154 (59.3 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 36/115 (31%), Positives = 64/115 (55%)
Query: 102 KISLLGDCQIGKTSFVVKYV-GNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 159
++ L+GD +GKT +V++ G S + G++ NK L V G ++ IWD G
Sbjct: 1 QVMLVGDSGVGKTCLLVRFKDGAFLAGSFISTVGIDFRNKVLTVDGVKVKLQIWDTAGQE 60
Query: 160 RSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTK 212
R F V A +DA A+L ++D+T++ + ++I W +E ++ Q + +L+G K
Sbjct: 61 R-FRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQQDVVLMLLGNK 114
>UNIPROTKB|F5GZB1 [details] [associations]
symbol:RAB6A "Ras-related protein Rab-6A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AP002770
EMBL:AP002993 HGNC:HGNC:9786 ChiTaRS:RAB6A IPI:IPI01009243
ProteinModelPortal:F5GZB1 SMR:F5GZB1 Ensembl:ENST00000539750
ArrayExpress:F5GZB1 Bgee:F5GZB1 Uniprot:F5GZB1
Length = 142
Score = 154 (59.3 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 32/128 (25%), Positives = 65/128 (50%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGAR 147
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 2 STGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT 61
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIP 206
I +WD G R +P +D+ A + ++D+T+ + W + R + I
Sbjct: 62 IRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVII 121
Query: 207 ILIGTKFD 214
+L+G K D
Sbjct: 122 MLVGNKTD 129
>MGI|MGI:1927232 [details] [associations]
symbol:Rab13 "RAB13, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0005525 "GTP binding" evidence=ISO] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IDA]
[GO:0005923 "tight junction" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=TAS] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=TAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=TAS] [GO:0019897
"extrinsic to plasma membrane" evidence=TAS] [GO:0030054 "cell
junction" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:1927232 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
Reactome:REACT_147847 GO:GO:0006886 GO:GO:0007264 GO:GO:0003924
GO:GO:0019897 GO:GO:0016023 GO:GO:0005923 GO:GO:0030659
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:5872 GeneTree:ENSGT00700000104031
KO:K06109 OrthoDB:EOG4BVRVS OMA:AMGIVLI EMBL:AK002303 EMBL:BC027214
IPI:IPI00121183 RefSeq:NP_080953.1 UniGene:Mm.29355
ProteinModelPortal:Q9DD03 SMR:Q9DD03 MINT:MINT-1340848
STRING:Q9DD03 PhosphoSite:Q9DD03 PaxDb:Q9DD03 PRIDE:Q9DD03
Ensembl:ENSMUST00000065418 GeneID:68328 KEGG:mmu:68328
UCSC:uc008qbn.1 InParanoid:Q9DD03 NextBio:327005 Bgee:Q9DD03
CleanEx:MM_RAB13 Genevestigator:Q9DD03
GermOnline:ENSMUSG00000027935 Uniprot:Q9DD03
Length = 202
Score = 154 (59.3 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 39/159 (24%), Positives = 77/159 (48%)
Query: 102 KISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
K+ L+GD +GKT ++++ N + G++ +T+ ++G RI +WD G R
Sbjct: 10 KLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQER 69
Query: 161 SFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFDDFVR 218
F + A + A+ I+ ++D+T + +I W ++ + +L+G K D +
Sbjct: 70 -FKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD--ME 126
Query: 219 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
+Q QA A+ + F +SA ++NV++ F
Sbjct: 127 AKRQVQ---REQAEKLAREHRIRFFETSAKSSVNVDEAF 162
>RGD|620880 [details] [associations]
symbol:Rab13 "RAB13, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=ISO;ISS]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0005911 "cell-cell junction" evidence=ISO] [GO:0005923 "tight
junction" evidence=IEA;ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] Reactome:REACT_97881 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:620880 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005794 GO:GO:0007264 GO:GO:0015031
GO:GO:0005923 GO:GO:0030659 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:5872
GeneTree:ENSGT00700000104031 KO:K06109 OrthoDB:EOG4BVRVS
OMA:AMGIVLI EMBL:AF525280 EMBL:M83678 IPI:IPI00202697 PIR:D42148
RefSeq:NP_112354.1 UniGene:Rn.9819 ProteinModelPortal:P35286
SMR:P35286 IntAct:P35286 MINT:MINT-2982767 STRING:P35286
PhosphoSite:P35286 PRIDE:P35286 Ensembl:ENSRNOT00000022627
GeneID:81756 KEGG:rno:81756 UCSC:RGD:620880 InParanoid:P35286
NextBio:615526 Genevestigator:P35286 GermOnline:ENSRNOG00000016733
Uniprot:P35286
Length = 203
Score = 154 (59.3 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 39/159 (24%), Positives = 77/159 (48%)
Query: 102 KISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
K+ L+GD +GKT ++++ N + G++ +T+ ++G RI +WD G R
Sbjct: 10 KLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQER 69
Query: 161 SFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFDDFVR 218
F + A + A+ I+ ++D+T + +I W ++ + +L+G K D +
Sbjct: 70 -FKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD--ME 126
Query: 219 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
+Q QA A+ + F +SA ++NV++ F
Sbjct: 127 AKRKVQ---REQAERLAREHRIRFFETSAKSSVNVDEAF 162
>TAIR|locus:2060415 [details] [associations]
symbol:RABH1d "RAB GTPase homolog H1D" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0009827 "plant-type cell wall modification" evidence=RCA]
[GO:0009860 "pollen tube growth" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0007264 GO:GO:0000139 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0016192 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
EMBL:AC007168 KO:K07976 HOGENOM:HOG000233968 IPI:IPI00547775
PIR:H84610 RefSeq:NP_179816.1 UniGene:At.52865 HSSP:Q26000
ProteinModelPortal:Q9SID8 SMR:Q9SID8 PaxDb:Q9SID8 PRIDE:Q9SID8
EnsemblPlants:AT2G22290.1 GeneID:816761 KEGG:ath:AT2G22290
TAIR:At2g22290 InParanoid:Q9SID8 OMA:SKGREYG PhylomeDB:Q9SID8
ProtClustDB:CLSN2683734 Genevestigator:Q9SID8 Uniprot:Q9SID8
Length = 207
Score = 154 (59.3 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 46/192 (23%), Positives = 89/192 (46%)
Query: 96 SDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWD 154
S L K+ LGD +GKTS + +++ ++ + + Q G++ ++KT+ ++ + +WD
Sbjct: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
Query: 155 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTA---IPILIGT 211
G R +P +D+ + ++D+ +R + + W E R N+ A I +L+G
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWIEEVR--NERAGDVIIVLVGN 122
Query: 212 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTV 271
K D + ++ ++ R Y T SA N+ +F+ I A L P
Sbjct: 123 KTDLVEKRQVSIEEG-DSKGREYGVMFIET----SAKAGFNIKPLFRKIAAAL---PGME 174
Query: 272 KRNLTIGEPIID 283
+ T E ++D
Sbjct: 175 SYSNTKNEDMVD 186
>UNIPROTKB|E2R2R0 [details] [associations]
symbol:RAB26 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104031 CTD:25837 KO:K07913 OMA:PSEPRFR
EMBL:AAEX03004625 RefSeq:XP_853648.1 UniGene:Cfa.19357
Ensembl:ENSCAFT00000030833 GeneID:610958 KEGG:cfa:610958
NextBio:20896503 Uniprot:E2R2R0
Length = 244
Score = 165 (63.1 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 37/120 (30%), Positives = 66/120 (55%)
Query: 99 VSLKISLLGDCQIGKTSFVVKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWDVG 156
V+ K+ L+GD +GKT +V++ + G++ NK L V G ++ IWD
Sbjct: 50 VAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQIWDTA 109
Query: 157 GDSRSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQ-TAIPILIGTKFD 214
G R F V A +DA A+L ++D+T++ + ++I W +E +++ Q + +L+G K D
Sbjct: 110 GQER-FRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIQEYAQHNVVLMLLGNKVD 168
>UNIPROTKB|P11023 [details] [associations]
symbol:RAB3A "Ras-related protein Rab-3A" species:9913 "Bos
taurus" [GO:0050975 "sensory perception of touch" evidence=ISS]
[GO:0016188 "synaptic vesicle maturation" evidence=ISS] [GO:0007274
"neuromuscular synaptic transmission" evidence=ISS] [GO:0003924
"GTPase activity" evidence=ISS] [GO:0051602 "response to electrical
stimulus" evidence=ISS] [GO:0048790 "maintenance of presynaptic
active zone structure" evidence=ISS] [GO:0031630 "regulation of
synaptic vesicle fusion to presynaptic membrane" evidence=ISS]
[GO:0030324 "lung development" evidence=ISS] [GO:0017157
"regulation of exocytosis" evidence=ISS] [GO:0016079 "synaptic
vesicle exocytosis" evidence=ISS] [GO:0009791 "post-embryonic
development" evidence=ISS] [GO:0008021 "synaptic vesicle"
evidence=ISS] [GO:0007409 "axonogenesis" evidence=ISS] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0003016 "respiratory
system process" evidence=ISS] [GO:0016020 "membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0001669 "acrosomal
vesicle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0016020
GO:GO:0030324 GO:GO:0015031 GO:GO:0008021 GO:GO:0051602
GO:GO:0007274 GO:GO:0003924 GO:GO:0009791 GO:GO:0007409
GO:GO:0003016 PROSITE:PS51419 GO:GO:0007005 GO:GO:0016079
eggNOG:COG1100 GO:GO:0050975 HOVERGEN:HBG009351 GO:GO:0016188
GO:GO:0031630 HOGENOM:HOG000233968 EMBL:M19885 EMBL:BC118278
IPI:IPI00703436 PIR:A29224 RefSeq:NP_776871.2 UniGene:Bt.2362
ProteinModelPortal:P11023 SMR:P11023 STRING:P11023 PRIDE:P11023
Ensembl:ENSBTAT00000014062 GeneID:282029 KEGG:bta:282029 CTD:5864
GeneTree:ENSGT00690000101942 InParanoid:P11023 KO:K07882
OMA:QLTEQPA OrthoDB:EOG4TB4C6 NextBio:20805892 GO:GO:0048790
Uniprot:P11023
Length = 220
Score = 159 (61.0 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 43/169 (25%), Positives = 80/169 (47%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFS 151
D + D + KI ++G+ +GKTSF+ +Y + + + G++ KT+ RI
Sbjct: 16 DQNFDYM-FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQ 74
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR--KWNQTAIPILI 209
IWD G R + A+ + M+D+T+ + N++ W ++ + W+ + +L+
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQV-LLV 133
Query: 210 GTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 258
G K D D + + + R A + F +SA NINV + F+
Sbjct: 134 GNKCD-----MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFE 177
>UNIPROTKB|P20336 [details] [associations]
symbol:RAB3A "Ras-related protein Rab-3A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0001669 "acrosomal vesicle" evidence=IEA]
[GO:0001671 "ATPase activator activity" evidence=IEA] [GO:0003016
"respiratory system process" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IEA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0008021 "synaptic vesicle"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0016079 "synaptic vesicle exocytosis"
evidence=IEA] [GO:0016188 "synaptic vesicle maturation"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0031630 "regulation of synaptic vesicle fusion to presynaptic
membrane" evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0048790 "maintenance of presynaptic active zone structure"
evidence=IEA] [GO:0050975 "sensory perception of touch"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0051117 "ATPase binding" evidence=IEA] [GO:0051602 "response to
electrical stimulus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003924 "GTPase activity" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007269 "neurotransmitter
secretion" evidence=TAS] [GO:0014047 "glutamate secretion"
evidence=TAS] [GO:0060201 "clathrin-sculpted acetylcholine
transport vesicle membrane" evidence=TAS] [GO:0060203
"clathrin-sculpted glutamate transport vesicle membrane"
evidence=TAS] [GO:0061202 "clathrin-sculpted gamma-aminobutyric
acid transport vesicle membrane" evidence=TAS] [GO:0070083
"clathrin-sculpted monoamine transport vesicle membrane"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=IMP;TAS]
Reactome:REACT_13685 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0030324 GO:GO:0015031 GO:GO:0008021
GO:GO:0051602 GO:GO:0007274 GO:GO:0003924 GO:GO:0009791
GO:GO:0007409 GO:GO:0003016 PROSITE:PS51419 GO:GO:0001671
GO:GO:0007005 EMBL:CH471106 GO:GO:0007269 GO:GO:0014047
GO:GO:0016079 eggNOG:COG1100 GO:GO:0050975 HOVERGEN:HBG009351
GO:GO:0061202 GO:GO:0016188 EMBL:AC068499 GO:GO:0031630
HOGENOM:HOG000233968 CTD:5864 KO:K07882 OMA:QLTEQPA
OrthoDB:EOG4TB4C6 GO:GO:0048790 EMBL:M28210 EMBL:AF157809
EMBL:AF157806 EMBL:AF157807 EMBL:AF157808 EMBL:AF254795
EMBL:AF498931 EMBL:AK289559 EMBL:BC011782 IPI:IPI00023504
PIR:C34323 RefSeq:NP_002857.1 UniGene:Hs.27744
ProteinModelPortal:P20336 SMR:P20336 IntAct:P20336 STRING:P20336
PhosphoSite:P20336 DMDM:131801 PaxDb:P20336 PRIDE:P20336 DNASU:5864
Ensembl:ENST00000222256 GeneID:5864 KEGG:hsa:5864 UCSC:uc002nie.2
GeneCards:GC19M018307 HGNC:HGNC:9777 HPA:CAB009949 HPA:HPA003160
MIM:179490 neXtProt:NX_P20336 PharmGKB:PA34132 InParanoid:P20336
PhylomeDB:P20336 GenomeRNAi:5864 NextBio:22774 Bgee:P20336
CleanEx:HS_RAB3A Genevestigator:P20336 GermOnline:ENSG00000105649
GO:GO:0060201 GO:GO:0060203 GO:GO:0070083 Uniprot:P20336
Length = 220
Score = 159 (61.0 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 43/169 (25%), Positives = 80/169 (47%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFS 151
D + D + KI ++G+ +GKTSF+ +Y + + + G++ KT+ RI
Sbjct: 16 DQNFDYM-FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQ 74
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR--KWNQTAIPILI 209
IWD G R + A+ + M+D+T+ + N++ W ++ + W+ + +L+
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQV-LLV 133
Query: 210 GTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 258
G K D D + + + R A + F +SA NINV + F+
Sbjct: 134 GNKCD-----MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFE 177
>UNIPROTKB|Q06AU3 [details] [associations]
symbol:RAB3A "Ras-related protein Rab-3A" species:9823 "Sus
scrofa" [GO:0030324 "lung development" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0016079 "synaptic vesicle exocytosis"
evidence=ISS] [GO:0051602 "response to electrical stimulus"
evidence=ISS] [GO:0050975 "sensory perception of touch"
evidence=ISS] [GO:0048790 "maintenance of presynaptic active zone
structure" evidence=ISS] [GO:0031630 "regulation of synaptic
vesicle fusion to presynaptic membrane" evidence=ISS] [GO:0017157
"regulation of exocytosis" evidence=ISS] [GO:0016188 "synaptic
vesicle maturation" evidence=ISS] [GO:0009791 "post-embryonic
development" evidence=ISS] [GO:0008021 "synaptic vesicle"
evidence=ISS] [GO:0007274 "neuromuscular synaptic transmission"
evidence=ISS] [GO:0007005 "mitochondrion organization"
evidence=ISS] [GO:0003016 "respiratory system process"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0001669 "acrosomal vesicle" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0030324 GO:GO:0015031 GO:GO:0008021 GO:GO:0051602
GO:GO:0007274 GO:GO:0003924 GO:GO:0009791 GO:GO:0007409
GO:GO:0003016 PROSITE:PS51419 GO:GO:0007005 GO:GO:0016079
eggNOG:COG1100 GO:GO:0050975 HOVERGEN:HBG009351 GO:GO:0016188
GO:GO:0031630 HOGENOM:HOG000233968 CTD:5864
GeneTree:ENSGT00690000101942 KO:K07882 OMA:QLTEQPA
OrthoDB:EOG4TB4C6 GO:GO:0048790 EMBL:DQ917632 RefSeq:NP_001116651.1
UniGene:Ssc.5969 ProteinModelPortal:Q06AU3 SMR:Q06AU3 PRIDE:Q06AU3
Ensembl:ENSSSCT00000015183 GeneID:100144498 KEGG:ssc:100144498
Uniprot:Q06AU3
Length = 220
Score = 159 (61.0 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 43/169 (25%), Positives = 80/169 (47%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFS 151
D + D + KI ++G+ +GKTSF+ +Y + + + G++ KT+ RI
Sbjct: 16 DQNFDYM-FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQ 74
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR--KWNQTAIPILI 209
IWD G R + A+ + M+D+T+ + N++ W ++ + W+ + +L+
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQV-LLV 133
Query: 210 GTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 258
G K D D + + + R A + F +SA NINV + F+
Sbjct: 134 GNKCD-----MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFE 177
>MGI|MGI:97843 [details] [associations]
symbol:Rab3a "RAB3A, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0001669 "acrosomal vesicle" evidence=IDA] [GO:0001671 "ATPase
activator activity" evidence=ISO] [GO:0003016 "respiratory system
process" evidence=IMP] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006184 "GTP
catabolic process" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006887 "exocytosis" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IMP] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0008021 "synaptic vesicle"
evidence=ISO;IDA] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=ISO] [GO:0016079 "synaptic vesicle
exocytosis" evidence=IMP] [GO:0016188 "synaptic vesicle maturation"
evidence=IMP] [GO:0017157 "regulation of exocytosis" evidence=IDA]
[GO:0030324 "lung development" evidence=IMP] [GO:0031630
"regulation of synaptic vesicle fusion to presynaptic membrane"
evidence=IMP] [GO:0032781 "positive regulation of ATPase activity"
evidence=ISO] [GO:0043229 "intracellular organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0048790
"maintenance of presynaptic active zone structure" evidence=IMP]
[GO:0050975 "sensory perception of touch" evidence=IMP] [GO:0051020
"GTPase binding" evidence=ISO] [GO:0051117 "ATPase binding"
evidence=ISO] [GO:0051602 "response to electrical stimulus"
evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:97843 EMBL:X72966 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0043234 GO:GO:0030324
GO:GO:0015031 GO:GO:0008021 GO:GO:0051602 GO:GO:0007274
GO:GO:0003924 GO:GO:0001669 GO:GO:0009791 GO:GO:0007409
GO:GO:0003016 PROSITE:PS51419 GO:GO:0001671 GO:GO:0007005
GO:GO:0016079 eggNOG:COG1100 GO:GO:0050975 HOVERGEN:HBG009351
GO:GO:0016188 GO:GO:0031630 HOGENOM:HOG000233968 CTD:5864 KO:K07882
OMA:QLTEQPA OrthoDB:EOG4TB4C6 GO:GO:0048790 EMBL:AK005362
EMBL:AK158727 EMBL:AK161975 EMBL:BC053519 IPI:IPI00122965
PIR:S34070 RefSeq:NP_001159871.1 RefSeq:NP_033027.1 UniGene:Mm.5083
ProteinModelPortal:P63011 SMR:P63011 DIP:DIP-31051N IntAct:P63011
MINT:MINT-85820 STRING:P63011 PhosphoSite:P63011 PaxDb:P63011
PRIDE:P63011 Ensembl:ENSMUST00000034301 Ensembl:ENSMUST00000110090
Ensembl:ENSMUST00000110092 Ensembl:ENSMUST00000110093 GeneID:19339
KEGG:mmu:19339 InParanoid:P63011 ChiTaRS:RAB3A NextBio:296339
Bgee:P63011 CleanEx:MM_RAB3A Genevestigator:P63011
GermOnline:ENSMUSG00000031840 Uniprot:P63011
Length = 220
Score = 159 (61.0 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 43/169 (25%), Positives = 80/169 (47%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFS 151
D + D + KI ++G+ +GKTSF+ +Y + + + G++ KT+ RI
Sbjct: 16 DQNFDYM-FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQ 74
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR--KWNQTAIPILI 209
IWD G R + A+ + M+D+T+ + N++ W ++ + W+ + +L+
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQV-LLV 133
Query: 210 GTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 258
G K D D + + + R A + F +SA NINV + F+
Sbjct: 134 GNKCD-----MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFE 177
>RGD|3528 [details] [associations]
symbol:Rab3a "RAB3A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0001669 "acrosomal vesicle" evidence=IEA;ISO]
[GO:0001671 "ATPase activator activity" evidence=IDA] [GO:0003016
"respiratory system process" evidence=IEA;ISO] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005525 "GTP binding" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=IEA;ISO] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IEA;ISO] [GO:0007409
"axonogenesis" evidence=IEA;ISO] [GO:0008021 "synaptic vesicle"
evidence=ISO;IDA] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0009791 "post-embryonic development"
evidence=IEA;ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IDA] [GO:0016079 "synaptic vesicle
exocytosis" evidence=IEA;ISO] [GO:0016188 "synaptic vesicle
maturation" evidence=IEA;ISO] [GO:0017157 "regulation of exocytosis"
evidence=ISO] [GO:0030324 "lung development" evidence=IEA;ISO]
[GO:0031630 "regulation of synaptic vesicle fusion to presynaptic
membrane" evidence=IEA;ISO] [GO:0032482 "Rab protein signal
transduction" evidence=IC] [GO:0032781 "positive regulation of ATPase
activity" evidence=IDA] [GO:0043229 "intracellular organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA] [GO:0048790
"maintenance of presynaptic active zone structure" evidence=IEA;ISO]
[GO:0050975 "sensory perception of touch" evidence=IEA;ISO]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0051117 "ATPase
binding" evidence=IDA] [GO:0051602 "response to electrical stimulus"
evidence=IEA;ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:3528
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0043234 GO:GO:0016020 GO:GO:0030324 GO:GO:0015031 GO:GO:0008021
GO:GO:0051602 GO:GO:0007274 GO:GO:0003924 GO:GO:0009791 GO:GO:0007409
GO:GO:0003016 PROSITE:PS51419 GO:GO:0001671 GO:GO:0007005
GO:GO:0051117 GO:GO:0016079 eggNOG:COG1100 GO:GO:0050975
HOVERGEN:HBG009351 GO:GO:0016188 GO:GO:0031630 HOGENOM:HOG000233968
GO:GO:0032482 CTD:5864 GeneTree:ENSGT00690000101942 KO:K07882
OMA:QLTEQPA OrthoDB:EOG4TB4C6 GO:GO:0048790 EMBL:X06889 EMBL:BC087580
IPI:IPI00325762 PIR:S01765 RefSeq:NP_037150.2 UniGene:Rn.44409
PDB:1ZBD PDB:3RAB PDBsum:1ZBD PDBsum:3RAB ProteinModelPortal:P63012
SMR:P63012 IntAct:P63012 MINT:MINT-1506235 STRING:P63012
PhosphoSite:P63012 PRIDE:P63012 Ensembl:ENSRNOT00000026391
GeneID:25531 KEGG:rno:25531 UCSC:RGD:3528 InParanoid:P63012
EvolutionaryTrace:P63012 NextBio:607029 ArrayExpress:P63012
Genevestigator:P63012 GermOnline:ENSRNOG00000019433 Uniprot:P63012
Length = 220
Score = 159 (61.0 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 43/169 (25%), Positives = 80/169 (47%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFS 151
D + D + KI ++G+ +GKTSF+ +Y + + + G++ KT+ RI
Sbjct: 16 DQNFDYM-FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQ 74
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR--KWNQTAIPILI 209
IWD G R + A+ + M+D+T+ + N++ W ++ + W+ + +L+
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQV-LLV 133
Query: 210 GTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 258
G K D D + + + R A + F +SA NINV + F+
Sbjct: 134 GNKCD-----MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFE 177
>UNIPROTKB|Q29RR0 [details] [associations]
symbol:RAB26 "Ras-related protein Rab-26" species:9913 "Bos
taurus" [GO:0017157 "regulation of exocytosis" evidence=ISS]
[GO:0031226 "intrinsic to plasma membrane" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0035272 "exocrine
system development" evidence=ISS] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0031226 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 HOGENOM:HOG000233968 GeneTree:ENSGT00700000104031
EMBL:BC114066 IPI:IPI00702165 RefSeq:NP_001039674.1
UniGene:Bt.13735 ProteinModelPortal:Q29RR0 SMR:Q29RR0 PRIDE:Q29RR0
Ensembl:ENSBTAT00000000348 GeneID:515675 KEGG:bta:515675 CTD:25837
InParanoid:Q29RR0 KO:K07913 OMA:PSEPRFR OrthoDB:EOG4VMFG9
NextBio:20871955 GO:GO:0035272 Uniprot:Q29RR0
Length = 256
Score = 166 (63.5 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 44/147 (29%), Positives = 75/147 (51%)
Query: 72 PAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNE--QERSL 129
P P+ G + R+ S G D V+ K+ L+GD +GKT +V++ +
Sbjct: 36 PGPEAPPNGPPQPGRS-SVGGGGDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFI 94
Query: 130 QMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIAC-KDAVAILFMFDLTSRCTLN 188
G++ NK + V G ++ IWD G R F V A +DA A+L ++D+T++ + +
Sbjct: 95 STVGIDFRNKVVDVDGMKVKLQIWDTAGQER-FRSVTHAYYRDAHALLLLYDVTNKASFD 153
Query: 189 SIVGWYSEARKWNQTAIPI-LIGTKFD 214
SI W +E ++ Q + + L+G K D
Sbjct: 154 SIQAWLTEIQEHAQDDVVLMLLGNKVD 180
>UNIPROTKB|P51152 [details] [associations]
symbol:RAB12 "Ras-related protein Rab-12" species:9615
"Canis lupus familiaris" [GO:0019003 "GDP binding" evidence=ISS]
[GO:0055038 "recycling endosome membrane" evidence=ISS] [GO:0005764
"lysosome" evidence=ISS] [GO:0044257 "cellular protein catabolic
process" evidence=ISS] [GO:0008333 "endosome to lysosome transport"
evidence=ISS] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139
GO:GO:0015031 GO:GO:0005764 GO:GO:0008333 PROSITE:PS51419
GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003 GO:GO:0044257
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:Z22818 PIR:S40207
UniGene:Cfa.44760 ProteinModelPortal:P51152 SMR:P51152 PRIDE:P51152
InParanoid:P51152 OrthoDB:EOG45757M Uniprot:P51152
Length = 208
Score = 153 (58.9 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 48/179 (26%), Positives = 87/179 (48%)
Query: 101 LKISLLGDCQIGKTSFVVKYVGNEQ-ERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 159
L++ ++G +GKTS + ++ + E G++ KT+ ++G +I IWD G
Sbjct: 7 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 66
Query: 160 RSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFDDFV 217
R F+ + A + A I+ ++D+T + T + + W K+ ++ A +L+G K D
Sbjct: 67 R-FNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLD--- 122
Query: 218 RLPPDLQWTIATQARAYAKAMKATLFF-SSATHNINVNKIF-KFIMAKLFNLPWTVKRN 274
D + T Q +A + F +SA N NV++IF K + L +P + RN
Sbjct: 123 -CETDREIT-RQQGEKFAHEITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRN 179
>WB|WBGene00004269 [details] [associations]
symbol:rab-6.1 species:6239 "Caenorhabditis elegans"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0031985 "Golgi cisterna" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0060473 "cortical
granule" evidence=IDA] [GO:0060471 "cortical granule exocytosis"
evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0060473
GO:GO:0031985 EMBL:Z11505 KO:K07976 HOGENOM:HOG000233968
GeneTree:ENSGT00600000084341 PIR:S31127 RefSeq:NP_498993.1
ProteinModelPortal:P34213 SMR:P34213 STRING:P34213 PaxDb:P34213
PRIDE:P34213 EnsemblMetazoa:F59B2.7.1 EnsemblMetazoa:F59B2.7.2
GeneID:176275 KEGG:cel:CELE_F59B2.7 UCSC:F59B2.7.1 CTD:176275
WormBase:F59B2.7 InParanoid:P34213 OMA:PNIVIMN NextBio:891878
ArrayExpress:P34213 GO:GO:0060471 Uniprot:P34213
Length = 205
Score = 153 (58.9 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 40/174 (22%), Positives = 82/174 (47%)
Query: 94 TDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSI 152
T++ L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++ I +
Sbjct: 5 TNNALKKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQL 64
Query: 153 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQT-AIPILIGT 211
WD G R +P +D+ + ++D+T+ + + W + R I +L+G
Sbjct: 65 WDTAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGN 124
Query: 212 KFDDFVRLPPDLQWTIATQ-ARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
K D L Q ++T+ A+ + +SA NV ++F+ I L
Sbjct: 125 KTD----LADKRQ--VSTEDGEKKARDLNVMFIETSAKAGYNVKQLFRKIATAL 172
>TAIR|locus:2202280 [details] [associations]
symbol:ARA-2 species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS;IDA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0003924 "GTPase
activity" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0007264 GO:GO:0009733
GO:GO:0015031 GO:GO:0003924 EMBL:AC068143 PROSITE:PS51419
eggNOG:COG1100 UniGene:At.133 UniGene:At.24592 KO:K07976
EMBL:D01024 EMBL:AF332428 EMBL:AY065306 EMBL:AY096439
IPI:IPI00533864 PIR:JS0639 RefSeq:NP_172128.1
ProteinModelPortal:P28185 SMR:P28185 STRING:P28185 PaxDb:P28185
PRIDE:P28185 EnsemblPlants:AT1G06400.1 GeneID:837151
KEGG:ath:AT1G06400 TAIR:At1g06400 HOGENOM:HOG000233968
InParanoid:P28185 OMA:HATFENA PhylomeDB:P28185
ProtClustDB:CLSN2914143 Genevestigator:P28185 GermOnline:AT1G06400
Uniprot:P28185
Length = 216
Score = 157 (60.3 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 50/183 (27%), Positives = 83/183 (45%)
Query: 90 SGYDTDSDLVSL-KISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGAR 147
+GY D + L K+ L+GD +GK++ + ++ NE S G+ KT V+G
Sbjct: 2 AGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKV 61
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 207
+ IWD G R + AV L ++D+T T + W E R I +
Sbjct: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVV 121
Query: 208 -LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 264
LIG K D +R L +A+A+A+ + +L+F +SA NV F ++ ++
Sbjct: 122 MLIGNKCD--LR---HLVAVKTEEAKAFAE--RESLYFMETSALDATNVENAFTEVLTQI 174
Query: 265 FNL 267
+
Sbjct: 175 HKI 177
>UNIPROTKB|Q9UBK7 [details] [associations]
symbol:RABL2A "Rab-like protein 2A" species:9606 "Homo
sapiens" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=TAS] [GO:0006184 "GTP catabolic process"
evidence=TAS] InterPro:IPR001806 InterPro:IPR005225 Pfam:PF00071
PRINTS:PR00449 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0003924 PROSITE:PS51419 eggNOG:COG1100 EMBL:AL078621
EMBL:AF095350 EMBL:AF095351 IPI:IPI00002644 IPI:IPI00221207
IPI:IPI00917072 RefSeq:NP_009013.1 RefSeq:NP_038198.1
UniGene:Hs.446425 ProteinModelPortal:Q9UBK7 SMR:Q9UBK7
STRING:Q9UBK7 PhosphoSite:Q9UBK7 DMDM:12643870 PRIDE:Q9UBK7
DNASU:11159 Ensembl:ENST00000393165 Ensembl:ENST00000393166
Ensembl:ENST00000393167 Ensembl:ENST00000409875 GeneID:11159
KEGG:hsa:11159 UCSC:uc002tkn.4 CTD:11159 GeneCards:GC02P114384
HGNC:HGNC:9799 MIM:605412 neXtProt:NX_Q9UBK7 PharmGKB:PA34159
HOGENOM:HOG000233971 HOVERGEN:HBG106536 KO:K07931 OMA:CTVEASE
OrthoDB:EOG4J1194 PhylomeDB:Q9UBK7 GenomeRNAi:11159 NextBio:42445
ArrayExpress:Q9UBK7 Bgee:Q9UBK7 CleanEx:HS_RABL2A
Genevestigator:Q9UBK7 GermOnline:ENSG00000144134 Uniprot:Q9UBK7
Length = 228
Score = 161 (61.7 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 49/169 (28%), Positives = 77/169 (45%)
Query: 92 YDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAF 150
YD D ++ KI LGD +GK+ + +++ + Q + L L L T V G I
Sbjct: 16 YDADDNV---KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILV 72
Query: 151 SIWDVGGDSRSFD-HVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-IL 208
WD G R H K A A + +FD+ + T ++ WY+E R++ + IP I+
Sbjct: 73 DFWDTAGQERFQSMHASYYHK-AHACIMVFDIQRKVTYRNLSTWYTELREF-RPEIPCIV 130
Query: 209 IGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
+ K DD + ++ +AK L+F SA NV K+F
Sbjct: 131 VANKIDDI---------NVTQKSFNFAKKFSLPLYFVSAADGTNVVKLF 170
>UNIPROTKB|O95716 [details] [associations]
symbol:RAB3D "Ras-related protein Rab-3D" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0006887 "exocytosis" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0017157 "regulation of exocytosis" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IEA] [GO:0030133
"transport vesicle" evidence=IEA] [GO:0042588 "zymogen granule"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0006184 "GTP catabolic process"
evidence=TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0006887
PROSITE:PS51419 GO:GO:0030133 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 GO:GO:0042588 GO:GO:0018125 HOGENOM:HOG000233968
OrthoDB:EOG4TB4C6 EMBL:AF081353 EMBL:AF498933 EMBL:BC016471
IPI:IPI00032808 RefSeq:NP_004274.1 UniGene:Hs.731663 PDB:2GF9
PDBsum:2GF9 ProteinModelPortal:O95716 SMR:O95716 IntAct:O95716
STRING:O95716 PhosphoSite:O95716 PaxDb:O95716 PRIDE:O95716
DNASU:9545 Ensembl:ENST00000222120 GeneID:9545 KEGG:hsa:9545
UCSC:uc002mqx.3 CTD:9545 GeneCards:GC19M011435 HGNC:HGNC:9779
HPA:CAB018067 MIM:604350 neXtProt:NX_O95716 PharmGKB:PA34134
InParanoid:O95716 KO:K07884 OMA:GKGPTLG PhylomeDB:O95716
EvolutionaryTrace:O95716 GenomeRNAi:9545 NextBio:35795 Bgee:O95716
CleanEx:HS_RAB3D Genevestigator:O95716 GermOnline:ENSG00000105514
Uniprot:O95716
Length = 219
Score = 158 (60.7 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 45/170 (26%), Positives = 81/170 (47%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+G+ +GKTSF+ +Y + + + G++ KT+ RI
Sbjct: 16 DQNFDYM-FKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQ 74
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR--KWNQTAIPILI 209
IWD G R + A+ L M+D+ ++ + ++ W ++ + W+ + IL+
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQV-ILV 133
Query: 210 GTKFD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 258
G K D + R+ P A R A + F +SA NINV ++F+
Sbjct: 134 GNKCDLEDERVVP------AEDGRRLADDLGFEFFEASAKENINVKQVFE 177
>ZFIN|ZDB-GENE-040801-2 [details] [associations]
symbol:rab3aa "RAB3A, member RAS oncogene family, a"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040801-2 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 KO:K07882 EMBL:CR769774 EMBL:BC075980
IPI:IPI00484138 RefSeq:NP_001003419.1 UniGene:Dr.83119 SMR:Q6DHJ2
Ensembl:ENSDART00000078838 GeneID:445024 KEGG:dre:445024 CTD:445024
InParanoid:Q6DHJ2 OMA:DIICERM OrthoDB:EOG42NJ17 NextBio:20831785
Uniprot:Q6DHJ2
Length = 220
Score = 158 (60.7 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 39/160 (24%), Positives = 76/160 (47%)
Query: 102 KISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
K+ ++G+ +GKTSF+ +Y + + + G++ KT+ RI IWD G R
Sbjct: 24 KVLIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQER 83
Query: 161 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR--KWNQTAIPILIGTKFDDFVR 218
+ A+ + M+D+T+ + N++ W ++ + W+ + +L+G K D
Sbjct: 84 YRTITTAYYRGAMGFILMYDITNEDSFNAVQDWSTQIKTYSWDNAQV-LLVGNKCD---- 138
Query: 219 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 258
D + + R ++ + F +SA NINV + F+
Sbjct: 139 -MEDERVVAGQRGRQLSEQLGFEFFEASAKDNINVKQTFE 177
>FB|FBgn0030200 [details] [associations]
symbol:RabX2 "RabX2" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0031982 "vesicle" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 EMBL:AE014298 KO:K07976 HSSP:P07560
GeneTree:ENSGT00700000104049 OrthoDB:EOG4RN8RG EMBL:AY752542
RefSeq:NP_572627.1 SMR:Q9W2V3 EnsemblMetazoa:FBtr0071448
GeneID:31971 KEGG:dme:Dmel_CG2885 UCSC:CG2885-RA CTD:31971
FlyBase:FBgn0030200 InParanoid:Q9W2V3 OMA:RGWLEEL GenomeRNAi:31971
NextBio:776189 Uniprot:Q9W2V3
Length = 195
Score = 152 (58.6 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 43/169 (25%), Positives = 82/169 (48%)
Query: 102 KISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
K+ +LGD +GK+ ++++ + E+ L+ G+++ +++ + + +WD GD R
Sbjct: 9 KVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
Query: 161 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPIL-IGTKFDDFVRL 219
+P + A IL ++D+TS + +I GW E R+ + +L +G K DD
Sbjct: 69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDD---- 124
Query: 220 PPDLQWTIATQARAYAKAMKATLFFS--SATHNINVNKIFKFIMAKLFN 266
P+ + Q YA + L F SA +NV IF + +++
Sbjct: 125 -PNHRQVSMEQGFNYAH--RGALGFEEVSAKSGMNVYDIFSSLAMDIYH 170
>ZFIN|ZDB-GENE-040801-185 [details] [associations]
symbol:rab18b "RAB18B, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0007420
"brain development" evidence=IMP] [GO:0001654 "eye development"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0006810 "transport" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-040801-185 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0007420 GO:GO:0015031 GO:GO:0009790
PROSITE:PS51419 eggNOG:COG1100 InterPro:IPR025662 GO:GO:0001654
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 KO:K07910 OrthoDB:EOG4VT5Z6
OMA:FAKRHRT EMBL:BC076054 IPI:IPI00506933 RefSeq:NP_001003449.1
UniGene:Dr.79683 ProteinModelPortal:Q6DHC1 SMR:Q6DHC1 STRING:Q6DHC1
PRIDE:Q6DHC1 Ensembl:ENSDART00000042737 GeneID:445055
KEGG:dre:445055 CTD:445055 InParanoid:Q6DHC1 NextBio:20831818
Bgee:Q6DHC1 Uniprot:Q6DHC1
Length = 205
Score = 152 (58.6 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 32/123 (26%), Positives = 61/123 (49%)
Query: 95 DSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIW 153
D L +LKI ++G+ +GK+S ++++ + + L G++ KT+ + G R +IW
Sbjct: 3 DDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIW 62
Query: 154 DVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW--NQTAIPILIGT 211
D G R P + A ++ ++D+T R T + W +E + + +L+G
Sbjct: 63 DTAGQERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLENWLNELETYCTRNDLVKMLVGN 122
Query: 212 KFD 214
K D
Sbjct: 123 KID 125
>TAIR|locus:2152753 [details] [associations]
symbol:RABA4C "RAB GTPase homolog A4C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968
HSSP:P20339 EMBL:AF218121 EMBL:AB024025 EMBL:BT024842
IPI:IPI00524205 RefSeq:NP_199607.1 UniGene:At.49142
ProteinModelPortal:Q9FE79 SMR:Q9FE79 STRING:Q9FE79 PaxDb:Q9FE79
PRIDE:Q9FE79 EnsemblPlants:AT5G47960.1 GeneID:834847
KEGG:ath:AT5G47960 TAIR:At5g47960 InParanoid:Q9FE79 OMA:QSFDHVA
PhylomeDB:Q9FE79 ProtClustDB:CLSN2916334 Genevestigator:Q9FE79
Uniprot:Q9FE79
Length = 223
Score = 159 (61.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 51/197 (25%), Positives = 89/197 (45%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGA 146
F S ++ D V K+ L+GD +GK+ + ++ NE S G+ +TL +
Sbjct: 4 FQSNFNQKIDYV-FKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRK 62
Query: 147 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAI 205
I IWD G R + AV + ++D+T R + + + W E R ++ +
Sbjct: 63 TIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIV 122
Query: 206 PILIGTKFD-DFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMA 262
+LIG K D +R P A+ +A+ + LFF +SA + NV F ++
Sbjct: 123 IMLIGNKTDLGTLRAVP------TEDAKEFAQ--RENLFFMETSALDSNNVEPSFLTVLT 174
Query: 263 KLFNLPWTVKRNLTIGE 279
+++ + K+NL E
Sbjct: 175 EIYRI--VSKKNLVANE 189
>ZFIN|ZDB-GENE-040426-2686 [details] [associations]
symbol:zgc:63637 "zgc:63637" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-040426-2686 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351 KO:K07893
HSSP:P10114 EMBL:BC058059 IPI:IPI00832042 RefSeq:NP_998530.1
UniGene:Dr.117991 ProteinModelPortal:Q6PEH6 SMR:Q6PEH6
STRING:Q6PEH6 GeneID:406674 KEGG:dre:406674 NextBio:20818202
ArrayExpress:Q6PEH6 Uniprot:Q6PEH6
Length = 211
Score = 154 (59.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 41/190 (21%), Positives = 88/190 (46%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQG 145
T + G + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 3 TTTGGGEFGDPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLED 62
Query: 146 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTA 204
+ +WD G R +P +D+ + ++D+T+ + W + R +
Sbjct: 63 RTVRLQLWDTAGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDV 122
Query: 205 IPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
I +L+G K D L Q ++ A A+ + +SA NV ++F+ + A L
Sbjct: 123 IIMLVGNKTD----LGDKRQVSVEA-AEKKARELGVMYIETSAKAGYNVKQLFRRVAAAL 177
Query: 265 FNLPWTVKRN 274
+ T +++
Sbjct: 178 PGMDSTPEKS 187
>UNIPROTKB|Q5ZHV1 [details] [associations]
symbol:RAB33B "Ras-related protein Rab-33B" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:2000156 "regulation of retrograde vesicle-mediated transport,
Golgi to ER" evidence=ISS] [GO:2000785 "regulation of autophagic
vacuole assembly" evidence=ISS] [GO:0005796 "Golgi lumen"
evidence=ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139
GO:GO:0015031 GO:GO:0006914 PROSITE:PS51419 GO:GO:0005796
eggNOG:COG1100 GO:GO:2000156 HOVERGEN:HBG009351 GO:GO:2000785
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 EMBL:AJ721033
IPI:IPI00571937 RefSeq:NP_001008466.1 UniGene:Gga.2252 HSSP:O35963
ProteinModelPortal:Q5ZHV1 SMR:Q5ZHV1 PRIDE:Q5ZHV1
Ensembl:ENSGALT00000015926 GeneID:422441 KEGG:gga:422441 CTD:83452
InParanoid:Q5ZHV1 KO:K07920 OMA:PAWIEEC OrthoDB:EOG4KH2W0
NextBio:20825073 Uniprot:Q5ZHV1
Length = 228
Score = 160 (61.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 48/172 (27%), Positives = 85/172 (49%)
Query: 102 KISLLGDCQIGKTSFVVKY-VGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
KI ++GD +GKT ++ G +R+ G++ + + + G RI +WD G R
Sbjct: 33 KIIVIGDSNVGKTCLTYRFCAGRFPQRTEATIGVDFRERAVTIDGERIKIQLWDTAGQER 92
Query: 161 -SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTA-IP-ILIGTKFD--D 215
V ++ A++F++D+T+ + +S+ W E ++ T IP IL+G K D +
Sbjct: 93 FRKSMVQHYYRNVHAVVFVYDMTNLASFHSLPSWIEECKQHLLTNDIPRILVGNKCDLRN 152
Query: 216 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATH---NINVNKIFKFIMAKL 264
+++P DL A+ +A LF +SA + N +V IF + KL
Sbjct: 153 AIQVPTDL-------AQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKL 197
>UNIPROTKB|Q9UNT1 [details] [associations]
symbol:RABL2B "Rab-like protein 2B" species:9606 "Homo
sapiens" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=TAS] [GO:0006184 "GTP catabolic process"
evidence=TAS] InterPro:IPR001806 InterPro:IPR005225 Pfam:PF00071
PRINTS:PR00449 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0003924 PROSITE:PS51419 eggNOG:COG1100 HOGENOM:HOG000233971
HOVERGEN:HBG106536 EMBL:AF095352 EMBL:BT020037 EMBL:AC002055
EMBL:BC014879 EMBL:BC024281 EMBL:BC075856 IPI:IPI00009415
IPI:IPI00220774 IPI:IPI00853263 RefSeq:NP_001003789.1
RefSeq:NP_001124391.1 RefSeq:NP_001124392.1 RefSeq:NP_001124393.1
RefSeq:NP_001124394.1 RefSeq:NP_001124395.1 RefSeq:NP_009012.1
UniGene:Hs.584862 ProteinModelPortal:Q9UNT1 SMR:Q9UNT1
IntAct:Q9UNT1 STRING:Q9UNT1 PhosphoSite:Q9UNT1 DMDM:12229940
PRIDE:Q9UNT1 DNASU:11158 Ensembl:ENST00000354869
Ensembl:ENST00000395593 Ensembl:ENST00000395595
Ensembl:ENST00000395598 Ensembl:ENST00000435118 GeneID:11158
KEGG:hsa:11158 UCSC:uc003bnk.1 UCSC:uc003bnl.1 UCSC:uc003bnm.1
CTD:11158 GeneCards:GC22M051205 HGNC:HGNC:9800 MIM:605413
neXtProt:NX_Q9UNT1 PharmGKB:PA34160 KO:K07932 OMA:RKITYKN
GenomeRNAi:11158 NextBio:42439 ArrayExpress:Q9UNT1 Bgee:Q9UNT1
CleanEx:HS_RABL2B Genevestigator:Q9UNT1 GermOnline:ENSG00000079974
Uniprot:Q9UNT1
Length = 228
Score = 160 (61.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 49/169 (28%), Positives = 77/169 (45%)
Query: 92 YDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAF 150
YD D ++ KI LGD +GK+ + +++ + Q + L L L T V G I
Sbjct: 16 YDADDNV---KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILV 72
Query: 151 SIWDVGGDSRSFD-HVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-IL 208
WD G R H K A A + +FD+ + T ++ WY+E R++ + IP I+
Sbjct: 73 DFWDTAGQERFQSMHASYYHK-AHACIMVFDVQRKVTYRNLSTWYTELREF-RPEIPCIV 130
Query: 209 IGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
+ K DD + ++ +AK L+F SA NV K+F
Sbjct: 131 VANKIDDI---------NVTQKSFNFAKKFSLPLYFVSAADGTNVVKLF 170
>UNIPROTKB|E2RLP0 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104049 EMBL:AAEX03014730 EMBL:AAEX03014731
EMBL:AAEX03014732 Ensembl:ENSCAFT00000016115 Uniprot:E2RLP0
Length = 201
Score = 151 (58.2 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 40/160 (25%), Positives = 74/160 (46%)
Query: 102 KISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
K+ ++GD + K+S ++++ N S L G++ +T+ + G ++ IWD G R
Sbjct: 10 KLLIIGDSGVVKSSLLLRFADNTFSASILTTIGVDFKIRTVEINGEKVKLQIWDTAGQER 69
Query: 161 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLP 220
+ ++ ++D+TS + ++ W E + IL+G K DD
Sbjct: 70 FRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDD----- 124
Query: 221 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 260
P+ + A +A M LF +SA N+NV ++F I
Sbjct: 125 PERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCI 164
>UNIPROTKB|H0YGL6 [details] [associations]
symbol:RAB6A "Ras-related protein Rab-6A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AP002770
EMBL:AP002993 HGNC:HGNC:9786 ChiTaRS:RAB6A Ensembl:ENST00000541973
Uniprot:H0YGL6
Length = 201
Score = 151 (58.2 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 40/167 (23%), Positives = 79/167 (47%)
Query: 110 QIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIA 168
++GKTS + +++ + + + Q G++ ++KT+ ++ I +WD G R +P
Sbjct: 16 EVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSY 75
Query: 169 CKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFDDFVRLPPDLQWTI 227
+D+ A + ++D+T+ + W + R + I +L+G K D L Q +I
Sbjct: 76 IRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD----LADKRQVSI 131
Query: 228 ATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRN 274
R AK + +SA NV ++F+ + A L + T R+
Sbjct: 132 EEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRS 177
>WB|WBGene00004275 [details] [associations]
symbol:rab-11.2 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0040010 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOGENOM:HOG000233968 GeneTree:ENSGT00690000101664
KO:K07904 EMBL:Z93391 RefSeq:NP_001251691.1
ProteinModelPortal:Q1ZXR4 SMR:Q1ZXR4 PaxDb:Q1ZXR4
EnsemblMetazoa:W04G5.2a GeneID:4363014 KEGG:cel:CELE_W04G5.2
UCSC:W04G5.2 CTD:4363014 WormBase:W04G5.2a InParanoid:Q1ZXR4
NextBio:959487 Uniprot:Q1ZXR4
Length = 198
Score = 151 (58.2 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 43/168 (25%), Positives = 76/168 (45%)
Query: 102 KISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
KI L+G+ +GK++ + ++ NE +S G+ K + V+G + IWD G R
Sbjct: 10 KIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGMER 69
Query: 161 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFDDFVRL 219
+ A+ L ++D++ T S+ W R N+ + L+G K D +
Sbjct: 70 FRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDLSHAV 129
Query: 220 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 267
P D +A+ YA+ + +SA N NV F I+ +++ L
Sbjct: 130 PTD-------EAKIYAERNHISFIETSALDNTNVEAAFTNIVTEIYKL 170
>ZFIN|ZDB-GENE-040704-16 [details] [associations]
symbol:zgc:91909 "zgc:91909" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-040704-16 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 KO:K07897 GeneTree:ENSGT00700000104345
OMA:WETEMEL EMBL:CR855300 EMBL:BC072717 IPI:IPI00509134
RefSeq:NP_001002178.1 UniGene:Dr.32183 SMR:Q6GQM5 STRING:Q6GQM5
Ensembl:ENSDART00000004065 Ensembl:ENSDART00000124225 GeneID:431725
KEGG:dre:431725 InParanoid:Q6GQM5 NextBio:20830961 Uniprot:Q6GQM5
Length = 204
Score = 151 (58.2 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 46/170 (27%), Positives = 81/170 (47%)
Query: 99 VSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGG 157
V LK+ +LGD +GKTS + +YV N+ + G + + K +MV + IWD G
Sbjct: 7 VLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66
Query: 158 DSRSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-----ILIGT 211
R F + +A + A + ++D+T+ T ++ W E T+ P +++G
Sbjct: 67 QER-FQSLGVAFYRGADCCVLVYDVTAPTTFKTLDSWRDEFLIQASTSDPENFPFVVLGN 125
Query: 212 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFF-SSATHNINVNKIFKFI 260
K D D + +A+A+ ++ +F +SA INV + F+ I
Sbjct: 126 KID------LDNRQVSTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTI 169
>TAIR|locus:2168103 [details] [associations]
symbol:AT5G59840 species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0009506
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
EMBL:AB015475 eggNOG:COG1100 HOGENOM:HOG000233968 HSSP:P07560
KO:K07901 OMA:KCDINDK ProtClustDB:CLSN2684795 UniGene:At.29202
UniGene:At.29203 EMBL:BT004152 EMBL:BT005628 IPI:IPI00519307
RefSeq:NP_200792.1 ProteinModelPortal:Q9FJF1 SMR:Q9FJF1
STRING:Q9FJF1 PaxDb:Q9FJF1 PRIDE:Q9FJF1 EnsemblPlants:AT5G59840.1
GeneID:836105 KEGG:ath:AT5G59840 TAIR:At5g59840 InParanoid:Q9FJF1
PhylomeDB:Q9FJF1 ArrayExpress:Q9FJF1 Genevestigator:Q9FJF1
Uniprot:Q9FJF1
Length = 216
Score = 156 (60.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 48/174 (27%), Positives = 85/174 (48%)
Query: 95 DSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIW 153
D D + +K+ L+GD +GK+ ++++ G+ + G++ +T+ + G RI IW
Sbjct: 11 DYDYL-IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
Query: 154 DVGGDSRSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI-PILIGT 211
D G R F + A + A+ IL ++D+T + N+I W + + IL+G
Sbjct: 70 DTAGQER-FRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGN 128
Query: 212 K--FDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAK 263
K D+ R P ++ +A A F +SA N+NV ++F F +AK
Sbjct: 129 KADMDESKRAVPK------SKGQALADEYGIKFFETSAKTNLNVEEVF-FSIAK 175
>UNIPROTKB|E2RIA5 [details] [associations]
symbol:RAB3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051602 "response to electrical stimulus"
evidence=IEA] [GO:0050975 "sensory perception of touch"
evidence=IEA] [GO:0048790 "maintenance of presynaptic active zone
structure" evidence=IEA] [GO:0031630 "regulation of synaptic
vesicle fusion to presynaptic membrane" evidence=IEA] [GO:0030324
"lung development" evidence=IEA] [GO:0016188 "synaptic vesicle
maturation" evidence=IEA] [GO:0016079 "synaptic vesicle exocytosis"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] [GO:0007274 "neuromuscular
synaptic transmission" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0003016 "respiratory system process"
evidence=IEA] [GO:0001669 "acrosomal vesicle" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0030324
GO:GO:0015031 GO:GO:0008021 GO:GO:0051602 GO:GO:0007274
GO:GO:0003924 GO:GO:0009791 GO:GO:0007409 GO:GO:0003016
GO:GO:0007005 GO:GO:0016079 GO:GO:0050975 GO:GO:0016188
GO:GO:0031630 GeneTree:ENSGT00690000101942 OMA:QLTEQPA
GO:GO:0048790 EMBL:AAEX03012283 ProteinModelPortal:E2RIA5
PRIDE:E2RIA5 Ensembl:ENSCAFT00000023719 NextBio:20858896
Uniprot:E2RIA5
Length = 226
Score = 159 (61.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 43/169 (25%), Positives = 80/169 (47%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFS 151
D + D + KI ++G+ +GKTSF+ +Y + + + G++ KT+ RI
Sbjct: 22 DQNFDYM-FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQ 80
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR--KWNQTAIPILI 209
IWD G R + A+ + M+D+T+ + N++ W ++ + W+ + +L+
Sbjct: 81 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQV-LLV 139
Query: 210 GTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 258
G K D D + + + R A + F +SA NINV + F+
Sbjct: 140 GNKCD-----MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFE 183
>UNIPROTKB|F1M7Q2 [details] [associations]
symbol:Rabl2b "Protein Rabl2b" species:10116 "Rattus
norvegicus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GeneTree:ENSGT00700000104228 OMA:RKITYKN IPI:IPI00200412
Ensembl:ENSRNOT00000044262 ArrayExpress:F1M7Q2 Uniprot:F1M7Q2
Length = 223
Score = 158 (60.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 49/161 (30%), Positives = 76/161 (47%)
Query: 100 SLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 158
++KI LGD +GK+ + +++ + Q + L L L T V G I WD G
Sbjct: 21 NVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQ 80
Query: 159 SRSFD-HVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFDDF 216
R H K A A + +FD+ + T ++ WY+E R++ + IP IL+ K D
Sbjct: 81 ERFQSMHASYYHK-AHACIMVFDVQRKITYKNLGTWYAELREF-RPEIPCILVANKID-- 136
Query: 217 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
D+Q T + ++AK L+F SA NV K+F
Sbjct: 137 ----ADIQMT--QKNFSFAKKFSLPLYFVSAADGTNVVKLF 171
>POMBASE|SPAC4C5.02c [details] [associations]
symbol:ryh1 "GTPase Ryh1" species:4896
"Schizosaccharomyces pombe" [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005525 "GTP binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=ISO] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IC] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=ISO] [GO:0071470 "cellular response to osmotic stress"
evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
PomBase:SPAC4C5.02c GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0005794 GO:GO:0006886
GO:GO:0007264 GO:GO:0000139 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0003924 GO:GO:0010008 GO:GO:0071470 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0042147 KO:K07976 HOGENOM:HOG000233968
EMBL:X52475 PIR:S12789 RefSeq:NP_593249.1 ProteinModelPortal:P17608
SMR:P17608 STRING:P17608 PRIDE:P17608 EnsemblFungi:SPAC4C5.02c.1
GeneID:2543529 KEGG:spo:SPAC4C5.02c OMA:PNENESS OrthoDB:EOG44BFBD
NextBio:20804539 Uniprot:P17608
Length = 201
Score = 150 (57.9 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 40/169 (23%), Positives = 79/169 (46%)
Query: 98 LVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 156
L K+ LG+ +GKTS + +++ ++ + + Q G++ ++KT+ ++ + +WD
Sbjct: 9 LRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 68
Query: 157 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFDD 215
G R +P +D+ + ++D+T+ + + W + R + I +L+G K D
Sbjct: 69 GQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTD- 127
Query: 216 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
L Q T + AK +K +SA NV +F+ I L
Sbjct: 128 ---LADKRQVT-QEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQML 172
>WB|WBGene00004267 [details] [associations]
symbol:rab-3 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA;ISS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0007271 "synaptic transmission, cholinergic"
evidence=IMP] [GO:0040012 "regulation of locomotion" evidence=IMP]
[GO:0007617 "mating behavior" evidence=IMP] [GO:0006935
"chemotaxis" evidence=IMP] [GO:0043051 "regulation of pharyngeal
pumping" evidence=IMP] [GO:0008021 "synaptic vesicle" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0008021
GO:GO:0003924 GO:GO:0007617 GO:GO:0040017 GO:GO:0007271
GO:GO:0006935 GO:GO:0043051 EMBL:FO080599 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 GeneTree:ENSGT00690000101942
OMA:QLTEQPA UniGene:Cel.19709 GeneID:173971 KEGG:cel:CELE_C18A3.6
UCSC:C18A3.6a CTD:173971 NextBio:881917 RefSeq:NP_001021973.1
ProteinModelPortal:Q95QV3 SMR:Q95QV3 STRING:Q95QV3 PRIDE:Q95QV3
EnsemblMetazoa:C18A3.6a WormBase:C18A3.6a InParanoid:Q95QV3
ArrayExpress:Q95QV3 Uniprot:Q95QV3
Length = 233
Score = 160 (61.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 42/169 (24%), Positives = 82/169 (48%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ ++G+ +GKTSF+ +Y + + + G++ KT+ R+
Sbjct: 30 DQNFDYM-FKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQ 88
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWN-QTAIPILIG 210
IWD G R + A+ + M+D+T+ + NS+ W ++ + ++ + A +L+G
Sbjct: 89 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVG 148
Query: 211 TKFDDFVRLPPDLQWTIAT-QARAYAKAMKATLFFSSATHNINVNKIFK 258
K D D + ++ + R A + F +SA NINV +F+
Sbjct: 149 NKCD------MDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFE 191
>UNIPROTKB|Q95QV3 [details] [associations]
symbol:rab-3 "Protein RAB-3, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006184 "GTP catabolic process"
evidence=ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 GO:GO:0003924 GO:GO:0007617 GO:GO:0040017
GO:GO:0007271 GO:GO:0006935 GO:GO:0043051 EMBL:FO080599 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 GeneTree:ENSGT00690000101942
OMA:QLTEQPA UniGene:Cel.19709 GeneID:173971 KEGG:cel:CELE_C18A3.6
UCSC:C18A3.6a CTD:173971 NextBio:881917 RefSeq:NP_001021973.1
ProteinModelPortal:Q95QV3 SMR:Q95QV3 STRING:Q95QV3 PRIDE:Q95QV3
EnsemblMetazoa:C18A3.6a WormBase:C18A3.6a InParanoid:Q95QV3
ArrayExpress:Q95QV3 Uniprot:Q95QV3
Length = 233
Score = 160 (61.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 42/169 (24%), Positives = 82/169 (48%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ ++G+ +GKTSF+ +Y + + + G++ KT+ R+
Sbjct: 30 DQNFDYM-FKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQ 88
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWN-QTAIPILIG 210
IWD G R + A+ + M+D+T+ + NS+ W ++ + ++ + A +L+G
Sbjct: 89 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVG 148
Query: 211 TKFDDFVRLPPDLQWTIAT-QARAYAKAMKATLFFSSATHNINVNKIFK 258
K D D + ++ + R A + F +SA NINV +F+
Sbjct: 149 NKCD------MDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFE 191
>UNIPROTKB|A4FUD7 [details] [associations]
symbol:RAB33B "RAB33B protein" species:9913 "Bos taurus"
[GO:2000785 "regulation of autophagic vacuole assembly"
evidence=IEA] [GO:2000156 "regulation of retrograde
vesicle-mediated transport, Golgi to ER" evidence=IEA] [GO:0005796
"Golgi lumen" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 CTD:83452 KO:K07920 OMA:PAWIEEC
OrthoDB:EOG4KH2W0 EMBL:DAAA02044439 EMBL:BC114731 IPI:IPI00687033
RefSeq:NP_001076909.1 UniGene:Bt.39194 SMR:A4FUD7 STRING:A4FUD7
Ensembl:ENSBTAT00000004165 GeneID:519982 KEGG:bta:519982
InParanoid:A4FUD7 NextBio:20872994 Uniprot:A4FUD7
Length = 229
Score = 159 (61.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 49/173 (28%), Positives = 85/173 (49%)
Query: 102 KISLLGDCQIGKTSFVVKY-VGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
KI ++GD +GKT ++ G +R+ G++ + + + G RI +WD G R
Sbjct: 35 KIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQER 94
Query: 161 SFDHVPIA--CKDAVAILFMFDLTSRCTLNSIVGWYSEARKWN-QTAIP-ILIGTKFD-- 214
F I ++ A++F++D+T+ + +S+ W E ++ T IP IL+G K D
Sbjct: 95 -FRKSMIQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLATDIPRILVGNKCDLR 153
Query: 215 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATH---NINVNKIFKFIMAKL 264
+++P DL A+ +A LF +SA + N +V IF + KL
Sbjct: 154 SAIQVPTDL-------AQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKL 199
>CGD|CAL0000352 [details] [associations]
symbol:VPS21 species:5476 "Candida albicans" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0007038 "endocytosed protein
transport to vacuole" evidence=IMP] [GO:0005770 "late endosome"
evidence=IDA] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0006623 "protein targeting to vacuole" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0000011 "vacuole
inheritance" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
CGD:CAL0000352 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0071216 GO:GO:0036180 GO:GO:0009405 GO:GO:0005770
EMBL:AACQ01000073 EMBL:AACQ01000072 eggNOG:COG1100
EMBL:AACQ01000109 EMBL:AACQ01000108 GO:GO:0007038 KO:K07976
HOGENOM:HOG000233968 RefSeq:XP_714175.1 RefSeq:XP_714216.1
RefSeq:XP_716121.1 RefSeq:XP_716205.1 ProteinModelPortal:Q59X89
SMR:Q59X89 STRING:Q59X89 GeneID:3642092 GeneID:3642203
GeneID:3644132 GeneID:3644161 KEGG:cal:CaO19.13721
KEGG:cal:CaO19.589 KEGG:cal:CaO19.6364 KEGG:cal:CaO19.8221
Uniprot:Q59X89
Length = 216
Score = 155 (59.6 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 46/172 (26%), Positives = 80/172 (46%)
Query: 100 SLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 158
++K+ LLG+ +GK+S V+++V N+ QE G + + + I + IWD G
Sbjct: 10 AVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQ 69
Query: 159 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--- 214
R P+ ++A A + ++D+T + W E + I I L+G K D
Sbjct: 70 ERFASLAPMYYRNAQAAIVVYDITKPASFIKARHWVKELHEQANRDITIALVGNKLDLVE 129
Query: 215 -DFVRLPPDLQWTIATQARAYAKAMKATLFF-SSATHNINVNKIFKFIMAKL 264
D L+ + ++ A + LFF +SA NVN++F I +K+
Sbjct: 130 DDSAEDGETLRKVSVEEGQSLADE-EGLLFFETSAKTGNNVNEVFVGIGSKI 180
>UNIPROTKB|Q59X89 [details] [associations]
symbol:VPS211 "Likely rab family GTP-binding protein"
species:237561 "Candida albicans SC5314" [GO:0005770 "late
endosome" evidence=IDA] [GO:0007038 "endocytosed protein transport
to vacuole" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0071216 "cellular
response to biotic stimulus" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 CGD:CAL0000352 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0071216 GO:GO:0036180 GO:GO:0009405
GO:GO:0005770 EMBL:AACQ01000073 EMBL:AACQ01000072 eggNOG:COG1100
EMBL:AACQ01000109 EMBL:AACQ01000108 GO:GO:0007038 KO:K07976
HOGENOM:HOG000233968 RefSeq:XP_714175.1 RefSeq:XP_714216.1
RefSeq:XP_716121.1 RefSeq:XP_716205.1 ProteinModelPortal:Q59X89
SMR:Q59X89 STRING:Q59X89 GeneID:3642092 GeneID:3642203
GeneID:3644132 GeneID:3644161 KEGG:cal:CaO19.13721
KEGG:cal:CaO19.589 KEGG:cal:CaO19.6364 KEGG:cal:CaO19.8221
Uniprot:Q59X89
Length = 216
Score = 155 (59.6 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 46/172 (26%), Positives = 80/172 (46%)
Query: 100 SLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 158
++K+ LLG+ +GK+S V+++V N+ QE G + + + I + IWD G
Sbjct: 10 AVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQ 69
Query: 159 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--- 214
R P+ ++A A + ++D+T + W E + I I L+G K D
Sbjct: 70 ERFASLAPMYYRNAQAAIVVYDITKPASFIKARHWVKELHEQANRDITIALVGNKLDLVE 129
Query: 215 -DFVRLPPDLQWTIATQARAYAKAMKATLFF-SSATHNINVNKIFKFIMAKL 264
D L+ + ++ A + LFF +SA NVN++F I +K+
Sbjct: 130 DDSAEDGETLRKVSVEEGQSLADE-EGLLFFETSAKTGNNVNEVFVGIGSKI 180
>TAIR|locus:2171943 [details] [associations]
symbol:RABA1c "RAB GTPase homolog A1C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005773
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
EMBL:AB012245 KO:K07976 HOGENOM:HOG000233968 EMBL:AF370219
EMBL:AY059111 EMBL:AY084274 IPI:IPI00534558 RefSeq:NP_199387.1
UniGene:At.7538 HSSP:Q15907 ProteinModelPortal:Q9FK68 SMR:Q9FK68
PaxDb:Q9FK68 PRIDE:Q9FK68 EnsemblPlants:AT5G45750.1 GeneID:834614
KEGG:ath:AT5G45750 TAIR:At5g45750 InParanoid:Q9FK68 OMA:QKQIRDS
PhylomeDB:Q9FK68 ProtClustDB:CLSN2685455 Genevestigator:Q9FK68
Uniprot:Q9FK68
Length = 216
Score = 155 (59.6 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 49/184 (26%), Positives = 82/184 (44%)
Query: 90 SGYDTDSDLVSL-KISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGAR 147
+GY D + L K+ L+GD +GK++ + ++ NE S G+ ++L V
Sbjct: 2 AGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKV 61
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 207
I IWD G R + AV L ++D+T T ++ W E R I +
Sbjct: 62 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVV 121
Query: 208 -LIGTKFDDFVRLPPDLQWTIATQAR-AYAKAMKATLFF--SSATHNINVNKIFKFIMAK 263
L+G K DL+ +A Q A + A K +L+F +SA NV F ++ +
Sbjct: 122 MLVGNK--------SDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQ 173
Query: 264 LFNL 267
+ ++
Sbjct: 174 IHHI 177
>DICTYBASE|DDB_G0268402 [details] [associations]
symbol:rab24 "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005793 "endoplasmic reticulum-Golgi
intermediate compartment" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0268402 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005783 GO:GO:0005794 GO:GO:0007264
GenomeReviews:CM000150_GR GO:GO:0016020 GO:GO:0015031 GO:GO:0005768
GO:GO:0006914 EMBL:AAFI02000003 PROSITE:PS51419 GO:GO:0005793
eggNOG:COG1100 KO:K07976 HSSP:P20339 RefSeq:XP_647434.1
ProteinModelPortal:Q55FU9 EnsemblProtists:DDB0229417 GeneID:8616241
KEGG:ddi:DDB_G0268402 OMA:FWVKELQ Uniprot:Q55FU9
Length = 202
Score = 149 (57.5 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 44/164 (26%), Positives = 80/164 (48%)
Query: 99 VSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 158
+ LK+ LLG +GKT V +Y + + G +K ++V + IWD G
Sbjct: 6 IDLKVVLLGYASVGKTCIVTRYTSGQFGDTHTTIGGAFSSKRVVVGETEVLLGIWDTAGT 65
Query: 159 SRSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDF 216
R + V ++ + A A + +DLT+R + + W E + N+ I I ++GTK D
Sbjct: 66 ER-YQAVNVSYYRRANAAIVCYDLTNRESWEKVTFWAEELTQ-NEPEIEIYIVGTKLD-L 122
Query: 217 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 260
++ D++ + + A+ KA +F +S+ NV+ +F+ I
Sbjct: 123 IQ-QGDIKAVPEEEVKQTARRYKAHIFETSSRTGENVSLLFQTI 165
>UNIPROTKB|F1NIP1 [details] [associations]
symbol:F1NIP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104288 EMBL:AADN02030323 EMBL:AADN02030324
EMBL:AADN02030325 IPI:IPI00600846 ProteinModelPortal:F1NIP1
Ensembl:ENSGALT00000011108 OMA:KVVFLGN Uniprot:F1NIP1
Length = 174
Score = 149 (57.5 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 39/154 (25%), Positives = 71/154 (46%)
Query: 102 KISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDSR 160
K+ +G+ +GK+SF+ ++ + L G++ K+LMV ++A +WD G R
Sbjct: 11 KVVFVGNSGVGKSSFIHRFCYDRFLADLNATIGIDYQVKSLMVDNTQVALQLWDTAGQER 70
Query: 161 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQT-AIPILIGTKFDDFVRL 219
+ A IL M+D+T+ C+ ++ W S ++ + A+ L+G K D R
Sbjct: 71 FRSITKQYFRKADGILVMYDITAECSFTAVRNWMSSVQEGIEDGAVVFLLGNKMDTAGR- 129
Query: 220 PPDLQWTIATQARAYAKAMKATLFFSSATHNINV 253
+ + + AK KA + SA N+
Sbjct: 130 --ETRSVPKMEGERLAKEYKAVFYECSAMTGYNI 161
>TAIR|locus:2082672 [details] [associations]
symbol:ARA6 species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0015031 "protein transport" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IDA] [GO:0005769 "early endosome" evidence=IDA]
[GO:0010009 "external side of endosome membrane" evidence=IDA]
[GO:0045022 "early endosome to late endosome transport"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005768 "endosome" evidence=IDA] [GO:0006623 "protein targeting
to vacuole" evidence=RCA] [GO:0006944 "cellular membrane fusion"
evidence=RCA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] [GO:0016197 "endosomal transport" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0007264 GO:GO:0031901 EMBL:AL049655
GO:GO:0015031 GO:GO:0003924 GO:GO:0006897 PROSITE:PS51419
GO:GO:0045022 GO:GO:0005769 eggNOG:COG1100 HSSP:P01112
GO:GO:0010009 KO:K07976 HOGENOM:HOG000233968 EMBL:AB007766
EMBL:BT002860 EMBL:BT004392 EMBL:AK316975 IPI:IPI00525135
IPI:IPI00846477 PIR:T06736 RefSeq:NP_001078287.1 RefSeq:NP_567008.1
UniGene:At.3115 ProteinModelPortal:Q9CB01 SMR:Q9CB01 IntAct:Q9CB01
STRING:Q9CB01 PaxDb:Q9CB01 PRIDE:Q9CB01 EnsemblPlants:AT3G54840.1
GeneID:824649 KEGG:ath:AT3G54840 TAIR:At3g54840 InParanoid:Q9CB01
OMA:ADLHEKR PhylomeDB:Q9CB01 ProtClustDB:CLSN2689166
Genevestigator:Q9CB01 Uniprot:Q9CB01
Length = 202
Score = 149 (57.5 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 53/200 (26%), Positives = 93/200 (46%)
Query: 70 SSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERS 128
+S PD L LS + + D+ + +K+ LLGD +GK+ V+++V G S
Sbjct: 4 ASSLPDRNSGTLSGLSNS-ENAVPADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATS 62
Query: 129 LQMAGLNLINKTLMVQGAR-IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTL 187
G + +++T+ +Q + + F IWD G R P+ + A + ++D+TS +
Sbjct: 63 KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPESF 122
Query: 188 NSIVGWYSEARKWNQTAIPI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFF-- 244
W E +K I + L+G K D L + + T+ A K +FF
Sbjct: 123 KKAQYWVKELQKHGSPDIVMALVGNKAD----LHEKRE--VPTED-GMELAEKNGMFFIE 175
Query: 245 SSATHNINVNKIFKFIMAKL 264
+SA N+N++F+ I +L
Sbjct: 176 TSAKTADNINQLFEEIGKRL 195
>FB|FBgn0014010 [details] [associations]
symbol:Rab5 "Rab5" species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=IEA;NAS] [GO:0003924 "GTPase
activity" evidence=ISS;NAS] [GO:0048488 "synaptic vesicle
endocytosis" evidence=TAS] [GO:0016189 "synaptic vesicle to
endosome fusion" evidence=IMP;TAS] [GO:0005769 "early endosome"
evidence=IDA;NAS] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0016321 "female meiosis chromosome segregation"
evidence=IMP] [GO:0007067 "mitosis" evidence=IMP] [GO:0050803
"regulation of synapse structure and activity" evidence=IMP]
[GO:0007349 "cellularization" evidence=IMP] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007298 "border follicle cell
migration" evidence=IMP] [GO:0006897 "endocytosis" evidence=IMP]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0035088 "establishment or maintenance of
apical/basal cell polarity" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0031982 "vesicle" evidence=ISS]
[GO:0007220 "Notch receptor processing" evidence=IMP] [GO:0035220
"wing disc development" evidence=IMP] [GO:0048477 "oogenesis"
evidence=IMP] [GO:0030100 "regulation of endocytosis" evidence=IMP]
[GO:0034058 "endosomal vesicle fusion" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0046664 "dorsal closure, amnioserosa morphology
change" evidence=IMP] [GO:0048803 "imaginal disc-derived male
genitalia morphogenesis" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0008285
GO:GO:0007264 GO:GO:0007067 EMBL:AE014134 GO:GO:0005811
GO:GO:0015031 GO:GO:0003924 GO:GO:0050803 GO:GO:0035220
GO:GO:0030100 GO:GO:0007298 GO:GO:0048813 GO:GO:0007409
GO:GO:0007220 GO:GO:0005769 eggNOG:COG1100 GO:GO:0006325
GO:GO:0016321 GO:GO:0007349 GO:GO:0035088 GO:GO:0046664
GO:GO:0016189 GO:GO:0048803 HSSP:P35278
GeneTree:ENSGT00640000091139 OMA:VDLQESN ChiTaRS:RAB5A KO:K07889
GO:GO:0034058 EMBL:AY060343 EMBL:AY081180 EMBL:AY081181
EMBL:AB035353 EMBL:AB035671 EMBL:BK000968 RefSeq:NP_523457.1
RefSeq:NP_722795.1 RefSeq:NP_722796.1 RefSeq:NP_722797.1
RefSeq:NP_722798.1 RefSeq:NP_722799.1 UniGene:Dm.6724 SMR:Q9V3I2
MINT:MINT-334912 STRING:Q9V3I2 EnsemblMetazoa:FBtr0077793
EnsemblMetazoa:FBtr0077794 EnsemblMetazoa:FBtr0077795
EnsemblMetazoa:FBtr0077796 EnsemblMetazoa:FBtr0077797
EnsemblMetazoa:FBtr0077798 EnsemblMetazoa:FBtr0330668
EnsemblMetazoa:FBtr0330669 EnsemblMetazoa:FBtr0330670 GeneID:33418
KEGG:dme:Dmel_CG3664 UCSC:CG3664-RA CTD:33418 FlyBase:FBgn0014010
InParanoid:Q9V3I2 OrthoDB:EOG4Z34WR GenomeRNAi:33418 NextBio:783450
Uniprot:Q9V3I2
Length = 219
Score = 156 (60.0 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 45/165 (27%), Positives = 75/165 (45%)
Query: 102 KISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
K+ LLG+ +GK+S V+++V G E G + +T+ ++ + F IWD G R
Sbjct: 31 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQER 90
Query: 161 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVRL 219
P+ + A A + ++D+ ++ + W E K I I L G K D
Sbjct: 91 YHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKAD----- 145
Query: 220 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
+++ +A+ YA+ +SA +NVN IF I KL
Sbjct: 146 LSNIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKL 190
>TAIR|locus:2145392 [details] [associations]
symbol:RABH1e "RAB GTPase homolog H1E" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0000139 GO:GO:0016192
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 EMBL:AL360334
HOGENOM:HOG000233968 OMA:PNIVIMN HSSP:Q26000
ProtClustDB:CLSN2683734 EMBL:BT020541 EMBL:BT024829 IPI:IPI00543211
PIR:T50814 RefSeq:NP_196588.3 UniGene:At.50443
ProteinModelPortal:Q9LFT9 SMR:Q9LFT9 PaxDb:Q9LFT9 PRIDE:Q9LFT9
EnsemblPlants:AT5G10260.1 GeneID:830890 KEGG:ath:AT5G10260
TAIR:At5g10260 InParanoid:Q9LFT9 PhylomeDB:Q9LFT9
Genevestigator:Q9LFT9 Uniprot:Q9LFT9
Length = 207
Score = 151 (58.2 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 40/171 (23%), Positives = 80/171 (46%)
Query: 96 SDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWD 154
S L K+ LGD +GKTS + +++ ++ + + Q G++ ++KT+ ++ + +WD
Sbjct: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
Query: 155 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKF 213
G R +P +D+ + ++D+ +R + + W + R + I +L+G K
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLVGNKT 124
Query: 214 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
D + ++ +AR Y T SA N+ +F+ I A L
Sbjct: 125 DLVDKRQVSIEEG-DNKARDYGVIFIET----SAKAGFNIKPLFRKIAAAL 170
>TAIR|locus:2079631 [details] [associations]
symbol:RABA5b "RAB GTPase homolog A5B" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009944
"polarity specification of adaxial/abaxial axis" evidence=RCA]
[GO:0010014 "meristem initiation" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 EMBL:AC009853 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 EMBL:AY072444 EMBL:BT002173
IPI:IPI00541946 RefSeq:NP_187397.1 UniGene:At.43319
UniGene:At.48630 ProteinModelPortal:Q9SRS5 SMR:Q9SRS5 IntAct:Q9SRS5
PaxDb:Q9SRS5 PRIDE:Q9SRS5 EnsemblPlants:AT3G07410.1 GeneID:819929
KEGG:ath:AT3G07410 TAIR:At3g07410 InParanoid:Q9SRS5 OMA:EEGLFFM
PhylomeDB:Q9SRS5 ProtClustDB:CLSN2683060 Genevestigator:Q9SRS5
Uniprot:Q9SRS5
Length = 217
Score = 155 (59.6 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 47/170 (27%), Positives = 83/170 (48%)
Query: 102 KISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
KI L+GD +GK++ + ++ +E + S G+ + + ++G + IWD G R
Sbjct: 14 KIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTAGQER 73
Query: 161 SFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFDDFVR 218
F V A + A L ++D+T T S+ W E TA+ +L+G K D
Sbjct: 74 -FRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLVGNKCD---- 128
Query: 219 LPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKLFN 266
D++ + +A A+ + LFF +SA NV+K F+ ++ ++FN
Sbjct: 129 -LEDIRAVSVEEGKALAE--EEGLFFMETSALDATNVDKAFEIVIREIFN 175
>TAIR|locus:2159285 [details] [associations]
symbol:RABA1f "RAB GTPase homolog A1F" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031 EMBL:AB015472
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968
HSSP:P20339 EMBL:AK118670 EMBL:BT005238 IPI:IPI00535677
RefSeq:NP_200894.1 UniGene:At.29139 UniGene:At.50545
ProteinModelPortal:Q9FJH0 SMR:Q9FJH0 IntAct:Q9FJH0 PaxDb:Q9FJH0
PRIDE:Q9FJH0 EnsemblPlants:AT5G60860.1 GeneID:836207
KEGG:ath:AT5G60860 TAIR:At5g60860 InParanoid:Q9FJH0 OMA:IHVDDKI
PhylomeDB:Q9FJH0 ProtClustDB:CLSN2916414 Genevestigator:Q9FJH0
Uniprot:Q9FJH0
Length = 217
Score = 155 (59.6 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 46/193 (23%), Positives = 87/193 (45%)
Query: 90 SGYDTDSDLVSL-KISLLGDCQIGKTSFVVKYVGNEQE-RSLQMAGLNLINKTLMVQGAR 147
+ Y D + L K+ L+GD +GK++ + ++ NE S G+ +++ V
Sbjct: 2 AAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKI 61
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 207
+ IWD G R + AV L ++D+T T ++ W E R I I
Sbjct: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVI 121
Query: 208 L-IGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 266
+ +G K D +R L+ A+A+A+ +SA ++NV F ++++++
Sbjct: 122 MFVGNKAD--LR---HLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYR 176
Query: 267 LPWTVKRNLTIGE 279
+ ++ L IG+
Sbjct: 177 V--VSRKALDIGD 187
>UNIPROTKB|J9P6H6 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
EMBL:AAEX03014730 EMBL:AAEX03014731 EMBL:AAEX03014732
RefSeq:XP_854240.3 Ensembl:ENSCAFT00000049240 GeneID:611477
KEGG:cfa:611477 Uniprot:J9P6H6
Length = 201
Score = 148 (57.2 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 39/160 (24%), Positives = 74/160 (46%)
Query: 102 KISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
K+ ++GD + K+S ++++ N S + G++ +T+ + G ++ IWD G R
Sbjct: 10 KLLIIGDSGVVKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQER 69
Query: 161 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLP 220
+ ++ ++D+TS + ++ W E + IL+G K DD
Sbjct: 70 FRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDD----- 124
Query: 221 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 260
P+ + A +A M LF +SA N+NV ++F I
Sbjct: 125 PERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCI 164
>UNIPROTKB|B2RAA6 [details] [associations]
symbol:RAB26 "cDNA, FLJ94800, Homo sapiens RAB26, member
RAS oncogene family (RAB26), mRNA" species:9606 "Homo sapiens"
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0017157 "regulation of
exocytosis" evidence=IEA] [GO:0031226 "intrinsic to plasma
membrane" evidence=IEA] [GO:0035272 "exocrine system development"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0031226 EMBL:AC009065 HOVERGEN:HBG009351 GO:GO:0017157
GO:GO:0035272 UniGene:Hs.3797 HGNC:HGNC:14259 ChiTaRS:RAB26
EMBL:AK314110 IPI:IPI01011362 SMR:B2RAA6 STRING:B2RAA6
Ensembl:ENST00000541451 Uniprot:B2RAA6
Length = 190
Score = 148 (57.2 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 105 LLGDCQIGKTSFVVKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSF 162
L+GD +GKT +V++ + G++ NK L V G ++ +WD G R F
Sbjct: 2 LVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQER-F 60
Query: 163 DHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 214
V A +DA A+L ++D+T++ + ++I W +E ++ Q + + L+G K D
Sbjct: 61 RSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVD 114
>TAIR|locus:2041036 [details] [associations]
symbol:ARA4 species:3702 "Arabidopsis thaliana"
[GO:0003924 "GTPase activity" evidence=IEA;IDA] [GO:0005525 "GTP
binding" evidence=IEA;ISS;IDA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005795 "Golgi stack" evidence=IDA] [GO:0005798
"Golgi-associated vesicle" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] [GO:0009408 "response to heat" evidence=IEP]
[GO:0048219 "inter-Golgi cisterna vesicle-mediated transport"
evidence=TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0007264 GO:GO:0000139 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0015031 GO:GO:0003924 GO:GO:0005795 GO:GO:0009408
GO:GO:0005798 GO:GO:0005802 PROSITE:PS51419 eggNOG:COG1100
EMBL:AC004450 KO:K07976 HOGENOM:HOG000233968
ProtClustDB:CLSN2683060 EMBL:D01026 EMBL:BT025784 EMBL:AK317205
IPI:IPI00531444 PIR:JS0641 RefSeq:NP_181842.1 UniGene:At.259
ProteinModelPortal:P28187 SMR:P28187 STRING:P28187 PaxDb:P28187
PRIDE:P28187 EnsemblPlants:AT2G43130.1 GeneID:818915
KEGG:ath:AT2G43130 TAIR:At2g43130 InParanoid:P28187 OMA:YDITRSS
PhylomeDB:P28187 Genevestigator:P28187 GermOnline:AT2G43130
GO:GO:0048219 Uniprot:P28187
Length = 214
Score = 154 (59.3 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 43/170 (25%), Positives = 82/170 (48%)
Query: 102 KISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
KI ++GD +GK++ + +Y NE S G+ +++++ G + IWD G R
Sbjct: 14 KIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQER 73
Query: 161 SFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFDDFVR 218
F V A + AV L ++D+T T ++ W E + T + +LIG K D
Sbjct: 74 -FRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCD---- 128
Query: 219 LPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKLFN 266
++ + ++ A++ LFF +SA + NV F+ ++ ++++
Sbjct: 129 -LESIRAVSVEEGKSLAES--EGLFFMETSALDSTNVKTAFEMVIREIYS 175
>MGI|MGI:1931295 [details] [associations]
symbol:Rab27b "RAB27b, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005795 "Golgi stack" evidence=ISO] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016324 "apical plasma membrane" evidence=ISO] [GO:0017157
"regulation of exocytosis" evidence=ISO] [GO:0019003 "GDP binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0030140 "trans-Golgi network transport vesicle"
evidence=ISO] [GO:0030667 "secretory granule membrane"
evidence=ISO] [GO:0032585 "multivesicular body membrane"
evidence=ISO] [GO:0042589 "zymogen granule membrane" evidence=ISO]
[GO:0045921 "positive regulation of exocytosis" evidence=ISO]
[GO:0071985 "multivesicular body sorting pathway" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1931295
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0016324 GO:GO:0003924 GO:GO:0005795
GO:GO:0032585 PROSITE:PS51419 GO:GO:0030140 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045921 HOVERGEN:HBG009351 GO:GO:0042589
GO:GO:0071985 PDB:2ZET PDBsum:2ZET HOGENOM:HOG000233968
GeneTree:ENSGT00700000104288 OrthoDB:EOG4PRSRM CTD:5874 KO:K07886
OMA:QNVEKSV EMBL:AF328893 EMBL:AY010898 EMBL:BC032928
IPI:IPI00120346 RefSeq:NP_001076022.1 RefSeq:NP_085031.3
UniGene:Mm.246753 PDB:2IEY PDB:2IEZ PDB:2IF0 PDBsum:2IEY
PDBsum:2IEZ PDBsum:2IF0 ProteinModelPortal:Q99P58 SMR:Q99P58
DIP:DIP-46237N STRING:Q99P58 PhosphoSite:Q99P58 PaxDb:Q99P58
PRIDE:Q99P58 Ensembl:ENSMUST00000069749 Ensembl:ENSMUST00000117692
Ensembl:ENSMUST00000121693 GeneID:80718 KEGG:mmu:80718
InParanoid:Q99P58 ChiTaRS:RAB27B EvolutionaryTrace:Q99P58
NextBio:350069 Bgee:Q99P58 CleanEx:MM_RAB27B Genevestigator:Q99P58
GermOnline:ENSMUSG00000024511 Uniprot:Q99P58
Length = 218
Score = 155 (59.6 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 52/176 (29%), Positives = 82/176 (46%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLM--VQGA--- 146
D D D + +K+ LGD +GKT+F+ +Y N+ + + G++ K ++ QGA
Sbjct: 3 DGDYDYL-IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGA 61
Query: 147 -----RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE--ARK 199
++ +WD G R +DA+ L MFDLTS+ + ++ W S+ A
Sbjct: 62 SGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANA 121
Query: 200 WNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNK 255
+ + +LIG K D LP D + QAR A+ F +SA NV K
Sbjct: 122 YCENPDIVLIGNKAD----LP-DQREVNERQARELAEKYGIPYFETSAATGQNVEK 172
>UNIPROTKB|E1BNX1 [details] [associations]
symbol:RAB3D "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042588 "zymogen granule" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0017157 GO:GO:0042588 GO:GO:0018125
GeneTree:ENSGT00690000101942 CTD:9545 KO:K07884 OMA:GKGPTLG
EMBL:DAAA02019486 IPI:IPI00709014 RefSeq:NP_001178304.1
UniGene:Bt.20052 Ensembl:ENSBTAT00000002783 GeneID:100139105
KEGG:bta:100139105 NextBio:20790194 Uniprot:E1BNX1
Length = 219
Score = 155 (59.6 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 44/170 (25%), Positives = 81/170 (47%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ L+G+ +GKTSF+ +Y + + + G++ KT+ RI
Sbjct: 16 DQNFDYM-FKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQ 74
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR--KWNQTAIPILI 209
IWD G R + A+ L M+D+ ++ + ++ W ++ + W+ + IL+
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFLLMYDVANQESFAAVQDWATQIKTYSWDNAQV-ILV 133
Query: 210 GTKFD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 258
G K D + R+ P + R A + F +SA NINV ++F+
Sbjct: 134 GNKCDLEDERVVP------TEEGRRLADDLGFEFFEASAKENINVKQVFE 177
>UNIPROTKB|F1S6G3 [details] [associations]
symbol:RAB3B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015031 "protein transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00690000101942 KO:K06108 EMBL:CU468046
RefSeq:XP_003128025.1 Ensembl:ENSSSCT00000026725 GeneID:100514585
KEGG:ssc:100514585 Uniprot:F1S6G3
Length = 219
Score = 155 (59.6 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 42/170 (24%), Positives = 83/170 (48%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ ++G+ +GKTSF+ +Y + + + G++ KT+ Q R+
Sbjct: 16 DQNFDYM-FKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRQEKRVKLQ 74
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR--KWNQTAIPILI 209
IWD G R + A+ + M+D+T+ + N++ W ++ + W+ + IL+
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQV-ILV 133
Query: 210 GTKFD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 258
G K D + R+ P + + A+ + F +SA NI+V + F+
Sbjct: 134 GNKCDMEEERVVP------TEKGQLLAEQLGFDFFEASAKENISVRQAFE 177
>TAIR|locus:2065858 [details] [associations]
symbol:RABA5d "RAB GTPase homolog A5D" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0007264 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 EMBL:AC007071 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 ProtClustDB:CLSN2683060
EMBL:BT009720 EMBL:AK227705 EMBL:AY085494 IPI:IPI00523233
PIR:G84723 RefSeq:NP_180726.1 UniGene:At.14359 UniGene:At.66393
ProteinModelPortal:Q9SIP0 SMR:Q9SIP0 PaxDb:Q9SIP0 PRIDE:Q9SIP0
EnsemblPlants:AT2G31680.1 GeneID:817724 KEGG:ath:AT2G31680
TAIR:At2g31680 InParanoid:Q9SIP0 OMA:ISRRSTF PhylomeDB:Q9SIP0
Genevestigator:Q9SIP0 Uniprot:Q9SIP0
Length = 219
Score = 155 (59.6 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 49/183 (26%), Positives = 85/183 (46%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNE-QERSLQMAGLNLINKTLMVQGARI 148
S D + KI ++GD +GK++ + +Y NE S G+ + + ++G +
Sbjct: 2 SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV 61
Query: 149 AFSIWDVGGDSRSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP- 206
IWD G R F V A + AV L ++D++ R T S+ W E + + T +
Sbjct: 62 KAQIWDTAGQER-FRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVAR 120
Query: 207 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKAT--LFF--SSATHNINVNKIFKFIMA 262
+L+G K D L+ +I + KA+ T LFF +SA + NV F+ ++
Sbjct: 121 MLVGNKCD--------LE-SIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIR 171
Query: 263 KLF 265
++
Sbjct: 172 DIY 174
>FB|FBgn0015794 [details] [associations]
symbol:Rab18 "Rab18" species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0008360 "regulation of cell shape"
evidence=IMP] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031982 "vesicle"
evidence=ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0008360
GO:GO:0015031 GO:GO:0003924 GO:GO:0007155 eggNOG:COG1100
InterPro:IPR025662 PROSITE:PS00675 HSSP:P07560 EMBL:D84317
ProteinModelPortal:O18337 SMR:O18337 STRING:O18337 PaxDb:O18337
PRIDE:O18337 FlyBase:FBgn0015794 HOGENOM:HOG000096258
InParanoid:O18337 OrthoDB:EOG4XD277 ArrayExpress:O18337 Bgee:O18337
Uniprot:O18337
Length = 197
Score = 147 (56.8 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 41/182 (22%), Positives = 92/182 (50%)
Query: 100 SLKISLLGDCQIGKTSFVVKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGD 158
++K+ ++G+ +GK+S + ++V N+ +++ + G++ +K + V G ++WD G
Sbjct: 5 AIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGA 64
Query: 159 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW--NQTAIPILIGTKFDDF 216
R + A+ + ++D+TSR +L + W +E + N I++G K D+
Sbjct: 65 ERFRSLTASFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKIDE- 123
Query: 217 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLT 276
R+ D + + R +A+ +A +SA + V+ +FK ++ K+ + + N +
Sbjct: 124 ERVV-DRE-----EGRKFARKHRALFIETSAKCDQFVSDVFKDVVEKIVSSEYFNNGNAS 177
Query: 277 IG 278
G
Sbjct: 178 AG 179
>ZFIN|ZDB-GENE-040718-250 [details] [associations]
symbol:rab30 "RAB30, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040718-250 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 CTD:27314 KO:K07917 OMA:DYKFLFK
OrthoDB:EOG43XV4G EMBL:CR538726 EMBL:BC076437 IPI:IPI00506069
RefSeq:NP_001002750.1 UniGene:Dr.32093 SMR:Q6DGB3
Ensembl:ENSDART00000055220 GeneID:437023 KEGG:dre:437023
InParanoid:Q6DGB3 NextBio:20831438 Uniprot:Q6DGB3
Length = 201
Score = 147 (56.8 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 42/172 (24%), Positives = 77/172 (44%)
Query: 95 DSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIW 153
D D + KI L+G+ +GKT V ++ G G++ + KT+ ++G ++ IW
Sbjct: 3 DYDYL-FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGVKVKLQIW 61
Query: 154 DVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTK 212
D G R + A A++ +D+T + + W E ++ N + IL+G K
Sbjct: 62 DTAGQERFRSITQSYYRSANALILTYDITCEDSFRCLPEWLREIEQYANNQVVTILVGNK 121
Query: 213 FDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
D D + + +A +A + +SA + NV K+F + +L
Sbjct: 122 ID-----LADKREVLRQRAEEFADSQSMLYLETSAKESDNVEKLFLDLACEL 168
>UNIPROTKB|I3LHP6 [details] [associations]
symbol:RAB3B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030141 "secretory granule" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0008021
GO:GO:0030141 GO:GO:0017157 GO:GO:0018125
GeneTree:ENSGT00690000101942 OMA:WFDFFEA EMBL:CU468046
Ensembl:ENSSSCT00000028423 Uniprot:I3LHP6
Length = 228
Score = 157 (60.3 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 45/173 (26%), Positives = 85/173 (49%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFS 151
D + D + K+ ++G+ +GKTSF+ +Y + + + G++ KT+ Q R+
Sbjct: 16 DQNFDYM-FKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRQEKRVKLQ 74
Query: 152 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR--KWNQTAIPILI 209
IWD G R + A+ + M+D+T+ + N++ W ++ + W+ + IL+
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQV-ILV 133
Query: 210 GTKFD-DFVRL-PPDLQWTIATQARAYAKAMKATL-FF-SSATHNINVNKIFK 258
G K D + R+ P + +A Q Y + FF +SA NI+V + F+
Sbjct: 134 GNKCDMEEERVVPTEKGQLLAEQLGMYMTYLYDWFDFFEASAKENISVRQAFE 186
>TAIR|locus:2075251 [details] [associations]
symbol:RABE1c species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0009873 "ethylene mediated signaling pathway"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006007 "glucose catabolic process" evidence=RCA] [GO:0042732
"D-xylose metabolic process" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005774 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0007264
GO:GO:0000139 GO:GO:0009873 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 EMBL:AL355775 HOGENOM:HOG000233968 OMA:WKSKCCS
KO:K07901 EMBL:D01025 EMBL:AY035132 EMBL:AY042795 EMBL:BT001952
EMBL:BT002186 IPI:IPI00518866 PIR:JS0640 RefSeq:NP_001078248.1
RefSeq:NP_001118780.1 RefSeq:NP_190192.1 UniGene:At.258
ProteinModelPortal:P28186 SMR:P28186 IntAct:P28186 STRING:P28186
PaxDb:P28186 PRIDE:P28186 EnsemblPlants:AT3G46060.1
EnsemblPlants:AT3G46060.2 EnsemblPlants:AT3G46060.3 GeneID:823749
KEGG:ath:AT3G46060 TAIR:At3g46060 InParanoid:P28186
PhylomeDB:P28186 ProtClustDB:CLSN2684795 Genevestigator:P28186
GermOnline:AT3G46060 Uniprot:P28186
Length = 216
Score = 154 (59.3 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 48/168 (28%), Positives = 82/168 (48%)
Query: 95 DSDLVSLKISLLGDCQIGKTSFVVKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIW 153
D D + +K+ L+GD +GK+ ++++ G+ + G++ +T+ + G RI IW
Sbjct: 11 DYDYL-IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIW 69
Query: 154 DVGGDSRSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI-PILIGT 211
D G R F + A + A+ IL ++D+T + N+I W + + IL+G
Sbjct: 70 DTAGQER-FRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGN 128
Query: 212 K--FDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 257
K D+ R P T QA A +K F +SA N+NV ++F
Sbjct: 129 KADMDESKRAVP----TAKGQALADEYGIK--FFETSAKTNLNVEEVF 170
>TAIR|locus:2142684 [details] [associations]
symbol:RAB8C "RAB GTPase homolog 8C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0000139 EMBL:AL162751
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOGENOM:HOG000233968
HSSP:P07560 KO:K07901 EMBL:AY035124 EMBL:AY056351 EMBL:AY087058
IPI:IPI00531864 IPI:IPI00656868 PIR:T48378 RefSeq:NP_001031827.1
RefSeq:NP_195972.1 UniGene:At.4875 ProteinModelPortal:Q9LZD4
SMR:Q9LZD4 STRING:Q9LZD4 PaxDb:Q9LZD4 PRIDE:Q9LZD4
EnsemblPlants:AT5G03520.1 GeneID:831817 KEGG:ath:AT5G03520
TAIR:At5g03520 InParanoid:Q9LZD4 OMA:DSFNTTF PhylomeDB:Q9LZD4
ProtClustDB:CLSN2685165 Genevestigator:Q9LZD4 Uniprot:Q9LZD4
Length = 216
Score = 154 (59.3 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 49/172 (28%), Positives = 83/172 (48%)
Query: 94 TDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSI 152
+D D + +K+ L+GD +GK+ ++++ + S + G++ +T+ + G RI I
Sbjct: 10 SDYDYL-IKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQI 68
Query: 153 WDVGGDSRSFDHVPIAC-KDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI-PILIG 210
WD G R F + A + A+ IL ++D+T + N+I W + + IL+G
Sbjct: 69 WDTAGQER-FRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDNVNKILVG 127
Query: 211 TK--FDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 260
K D+ R P T QA A +K F +SA N+NV +F I
Sbjct: 128 NKADMDESKRAVP----TAKGQALADEYGIK--FFETSAKTNLNVENVFMSI 173
>UNIPROTKB|Q5R615 [details] [associations]
symbol:RAB33B "Ras-related protein Rab-33B" species:9601
"Pongo abelii" [GO:0005796 "Golgi lumen" evidence=ISS] [GO:2000156
"regulation of retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISS] [GO:2000785 "regulation of autophagic vacuole
assembly" evidence=ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139
GO:GO:0015031 GO:GO:0006914 PROSITE:PS51419 GO:GO:0005796
GO:GO:2000156 HOVERGEN:HBG009351 GO:GO:2000785
GeneTree:ENSGT00700000104044 HSSP:O35963 CTD:83452 KO:K07920
OMA:PAWIEEC OrthoDB:EOG4KH2W0 EMBL:CR860685 RefSeq:NP_001126634.1
UniGene:Pab.2592 ProteinModelPortal:Q5R615 SMR:Q5R615 PRIDE:Q5R615
Ensembl:ENSPPYT00000017519 GeneID:100173632 KEGG:pon:100173632
InParanoid:Q5R615 Uniprot:Q5R615
Length = 229
Score = 157 (60.3 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 47/172 (27%), Positives = 84/172 (48%)
Query: 102 KISLLGDCQIGKTSFVVKY-VGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 160
KI ++GD +GKT ++ G +R+ G++ + + + G RI +WD G R
Sbjct: 35 KIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQER 94
Query: 161 -SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTA-IP-ILIGTKFD--D 215
V ++ A++F++D+T+ + +S+ W E ++ + IP IL+G K D
Sbjct: 95 FRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLASDIPRILVGNKCDLRS 154
Query: 216 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATH---NINVNKIFKFIMAKL 264
+++P DL A+ +A LF +SA + N +V IF + KL
Sbjct: 155 AIQVPTDL-------AQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKL 199
>UNIPROTKB|Q9H0N0 [details] [associations]
symbol:RAB6C "Ras-related protein Rab-6C" species:9606
"Homo sapiens" [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=TAS]
[GO:0003924 "GTPase activity" evidence=IDA] [GO:0042493 "response
to drug" evidence=IDA] [GO:0005622 "intracellular" evidence=IC]
[GO:0005813 "centrosome" evidence=IDA] [GO:0022402 "cell cycle
process" evidence=IMP] [GO:0010824 "regulation of centrosome
duplication" evidence=IMP] [GO:0006184 "GTP catabolic process"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0007264 GO:GO:0042493 GO:GO:0015031
GO:GO:0003924 EMBL:CH471103 EMBL:CH471058 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0010824 GO:GO:0022402
HOGENOM:HOG000233968 UniGene:Hs.591552 EMBL:AF309646 EMBL:AL136727
EMBL:CR533469 EMBL:AC079776 EMBL:BC120999 EMBL:AF124200
IPI:IPI00030304 RefSeq:NP_115520.2 ProteinModelPortal:Q9H0N0
SMR:Q9H0N0 IntAct:Q9H0N0 STRING:Q9H0N0 PhosphoSite:Q9H0N0
DMDM:166214970 PaxDb:Q9H0N0 PRIDE:Q9H0N0 DNASU:84084
Ensembl:ENST00000410061 GeneID:84084 KEGG:hsa:84084 UCSC:uc002tpx.1
CTD:84084 GeneCards:GC02P130737 H-InvDB:HIX0002449
H-InvDB:HIX0023949 HGNC:HGNC:16525 MIM:612909 neXtProt:NX_Q9H0N0
PharmGKB:PA34148 InParanoid:Q9H0N0 KO:K07895 OMA:TRAKAGY
OrthoDB:EOG4HMJB5 GenomeRNAi:84084 NextBio:73315 Bgee:Q9H0N0
Genevestigator:Q9H0N0 GermOnline:ENSG00000185023 Uniprot:Q9H0N0
Length = 254
Score = 160 (61.4 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 42/178 (23%), Positives = 84/178 (47%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFVVKYVGNEQERSLQ-MAGLNLINKTLMVQGAR 147
S+G D + L K+ LG+ + KTS + ++ + + + Q + G++ ++KT+ ++
Sbjct: 2 SAGGDFGNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGT 61
Query: 148 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 207
I +WD G R +P +D+ A + ++D+T+ + W + R + + I
Sbjct: 62 IGLRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVII 121
Query: 208 -LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 264
L+G + D L Q ++ R AK + T + A NV ++F+ + A L
Sbjct: 122 TLVGNRTD----LADKRQVSVEEGERK-AKGLNVTFIETRAKAGYNVKQLFRRVAAAL 174
WARNING: HSPs involving 757 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.135 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 284 266 0.00094 114 3 11 22 0.42 33
32 0.39 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1007
No. of states in DFA: 610 (65 KB)
Total size of DFA: 198 KB (2112 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.07u 0.20s 20.27t Elapsed: 00:00:01
Total cpu time: 20.11u 0.20s 20.31t Elapsed: 00:00:01
Start: Thu May 9 20:14:28 2013 End: Thu May 9 20:14:29 2013
WARNINGS ISSUED: 2