BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023317
(284 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3O08|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form I
pdb|3O08|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form I
pdb|3O1B|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Ii
pdb|3O1W|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iii
pdb|3O1W|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iii
pdb|3O4W|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iv
pdb|3O4W|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iv
pdb|3O5B|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Vii
With Glucose Bound (Open State)
pdb|3O5B|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Vii
With Glucose Bound (Open State)
pdb|3O6W|A Chain A, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Viii
(Open State)
pdb|3O6W|B Chain B, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Viii
(Open State)
pdb|3O80|A Chain A, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Ix
(Open State)
pdb|3O8M|A Chain A, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Xi
With Glucose Bound (Closed State)
Length = 485
Score = 154 bits (389), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 142/277 (51%), Gaps = 19/277 (6%)
Query: 1 MERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLP 60
+E++ + + V AL+NDT GTL Y + +I+GTG N AY + I K GLLP
Sbjct: 195 IEKLNIPINVVALINDTTGTLVASLYTDPQTKMGIIIGTGVNGAYYDVVSGIEKLEGLLP 254
Query: 61 KS----GEMVINMEWGNFRSSHL--PLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVR 114
+ M IN E+G+F + HL P T+YD +D ES PG+Q FEK+ SG YLGEI+R
Sbjct: 255 EDIGPDSPMAINCEYGSFDNEHLVLPRTKYDVIIDEESPRPGQQAFEKMTSGYYLGEIMR 314
Query: 115 RVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTS 174
VL + + F D KLK +++ T + S + D +L K L I T
Sbjct: 315 LVLLDLYDSGFIFKDQDISKLKEAYVMDTSYPSKIEDDPFENLEDTDDLFKTNLNIETTV 374
Query: 175 LKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTK 234
++ RKL+ +L ++V TR ARL+ G+ I K G T IA DG +F Y
Sbjct: 375 VE-RKLIRKLAELVGTRAARLTVCGVSAICDKRGYKTAH--------IAADGSVFNRYPG 425
Query: 235 FSACMQSTVKELLGEEVSE----TVVIEHSNDGSGIG 267
+ +K++ +V + + + + DGSG+G
Sbjct: 426 YKEKAAQALKDIYNWDVEKMEDHPIQLVAAEDGSGVG 462
>pdb|1IG8|A Chain A, Crystal Structure Of Yeast Hexokinase Pii With The Correct
Amino Acid Sequence
Length = 486
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 127/249 (51%), Gaps = 15/249 (6%)
Query: 6 LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLL----PK 61
+ + V AL+NDT GTL Y + + VI GTG N AY + I K G L P
Sbjct: 201 IPIEVVALINDTTGTLVASYYTDPETKMGVIFGTGVNGAYYDVCSDIEKLQGKLSDDIPP 260
Query: 62 SGEMVINMEWGNFRSSH--LPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCR 119
S M IN E+G+F + H LP T+YD +D ES PG+Q FEK+ SG YLGEI+R L
Sbjct: 261 SAPMAINCEYGSFDNEHVVLPRTKYDITIDEESPRPGQQTFEKMSSGYYLGEILRLALMD 320
Query: 120 MAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRK 179
M ++ F + K PF++ T + + + D +L ++ I NT+++ RK
Sbjct: 321 MYKQGFIFKNQDLSKFDKPFVMDTSYPARIEEDPFENLEDTDDLFQNEFGI-NTTVQERK 379
Query: 180 LVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACM 239
L+ L +++ R ARLS GI I +K G T IA DG ++ Y F
Sbjct: 380 LIRRLSELIGARAARLSVCGIAAICQKRGYKTGH--------IAADGSVYNRYPGFKEKA 431
Query: 240 QSTVKELLG 248
+ +K++ G
Sbjct: 432 ANALKDIYG 440
>pdb|3HM8|A Chain A, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
pdb|3HM8|B Chain B, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
pdb|3HM8|C Chain C, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
pdb|3HM8|D Chain D, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
Length = 445
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 149/269 (55%), Gaps = 16/269 (5%)
Query: 3 RIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKS 62
R +++ V A+VNDT+GT+ Y + +I+GTGTNA Y+E + G+ S
Sbjct: 173 RQAVELNVVAIVNDTVGTMMSCGYEDPRCEIGLIVGTGTNACYMEELRNVA---GVPGDS 229
Query: 63 GEMVINMEWGNFR---SSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCR 119
G M INMEWG F S + T +D ++D S+NPG+Q FEK+ISGMYLGEIVR +L
Sbjct: 230 GRMCINMEWGAFGDDGSLAMLSTRFDASVDQASINPGKQRFEKMISGMYLGEIVRHILLH 289
Query: 120 MAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDI-LEISNTSLKMR 178
+ F +L+ I +T +S + D S LR V L+D+ L +++ M
Sbjct: 290 LTSLGVLFRGQQIQRLQTRDIFKTKFLSEIESD-SLALRQVRAILEDLGLPLTSDDALM- 347
Query: 179 KLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSAC 238
V+E+C V+ R A+L AG+ +++K+ + R E+ + +DG L++ + +FS+
Sbjct: 348 --VLEVCQAVSQRAAQLCGAGVAAVVEKIREN--RGLEELAVSVGVDGTLYKLHPRFSSL 403
Query: 239 MQSTVKELLGEEVSETVVIEHSNDGSGIG 267
+ +TV+EL V V S DGSG G
Sbjct: 404 VAATVRELAPRCV---VTFLQSEDGSGKG 429
>pdb|1BDG|A Chain A, Hexokinase From Schistosoma Mansoni Complexed With Glucose
Length = 451
Score = 144 bits (363), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 150/280 (53%), Gaps = 15/280 (5%)
Query: 1 MERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLP 60
+++ L+++ A+VNDT+GTLA + +I+GTGTN AY+E + + G+
Sbjct: 182 LDKRELNVKCVAVVNDTVGTLASCALEDPKCAVGLIVGTGTNVAYIEDSSKVELMDGV-- 239
Query: 61 KSGEMVINMEWGNF-RSSHLPL--TEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVL 117
K E+VIN EWG F L T++D+++D +SL+PG+Q++EK++SGMYLGE+VR ++
Sbjct: 240 KEPEVVINTEWGAFGEKGELDCWRTQFDKSMDIDSLHPGKQLYEKMVSGMYLGELVRHII 299
Query: 118 CRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKM 177
+ E+ F +P +LK+ L T +++ + D + L L D L +
Sbjct: 300 VYLVEQKILFRGDLPERLKVRNSLLTRYLTDVERDPAHLLYNTHYMLTDDLHVPVVEPID 359
Query: 178 RKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSA 237
++V C++V R A L+ AGI IL+++ R V + +DG L++ + KF
Sbjct: 360 NRIVRYACEMVVKRAAYLAGAGIACILRRINRSEV--------TVGVDGSLYKFHPKFCE 411
Query: 238 CMQSTVKELLGEEVSETVVIEHSNDGSGIGXXXXXXSHSQ 277
M V +L + + + S DGSG G S ++
Sbjct: 412 RMTDMVDKL--KPKNTRFCLRLSEDGSGKGAAAIAASCTR 449
>pdb|2NZT|A Chain A, Crystal Structure Of Human Hexokinase Ii
pdb|2NZT|B Chain B, Crystal Structure Of Human Hexokinase Ii
Length = 902
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 143/270 (52%), Gaps = 18/270 (6%)
Query: 3 RIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKS 62
R D+ + A+VNDT+GT+ Y + + +I+GTG+NA Y+E I G
Sbjct: 182 RGDFDIDIVAVVNDTVGTMMTCGYDDHNCEIGLIVGTGSNACYMEEMRHIDMVEG---DE 238
Query: 63 GEMVINMEWGNFR---SSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCR 119
G M INMEWG F S + TE+D+ +D SLNPG+Q+FEK+ISGMY+GE+VR +L +
Sbjct: 239 GRMCINMEWGAFGDDGSLNDIRTEFDQEIDMGSLNPGKQLFEKMISGMYMGELVRLILVK 298
Query: 120 MAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRK 179
MA+E FG + P+L T +S + + +K +++L
Sbjct: 299 MAKEELLFGGKLSPELLNTGRFETKDISDIEGEKDGI-----RKAREVLMRLGLDPTQED 353
Query: 180 LVV--ELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSA 237
V +C IV+TR A L AA + +L+++ + + E+ +S I +DG +++ + F+
Sbjct: 354 CVATHRICQIVSTRSASLCAATLAAVLQRIKEN--KGEERLRSTIGVDGSVYKKHPHFAK 411
Query: 238 CMQSTVKELLGEEVSETVVIEHSNDGSGIG 267
+ TV+ L+ V S DGSG G
Sbjct: 412 RLHKTVRRLV---PGCDVRFLRSEDGSGKG 438
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 139/265 (52%), Gaps = 14/265 (5%)
Query: 6 LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM 65
D+ V A+VNDT+GT+ + + +I+GTG+NA Y+E + G + G M
Sbjct: 633 FDLDVVAVVNDTVGTMMTCGFEDPHCEVGLIVGTGSNACYMEEMRNVELVEG---EEGRM 689
Query: 66 VINMEWGNFRSSHLP---LTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAE 122
+NMEWG F + TE+D A+D SLNPG+Q FEK+ISGMYLGEIVR +L +
Sbjct: 690 CVNMEWGAFGDNGCLDDFRTEFDVAVDELSLNPGKQRFEKMISGMYLGEIVRNILIDFTK 749
Query: 123 EANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVV 182
F + +LK I T +S + D L+V + + L + +T +V
Sbjct: 750 RGLLFRGRISERLKTRGIFETKFLSQIESDCLALLQV--RAILQHLGLESTC-DDSIIVK 806
Query: 183 ELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQST 242
E+C +VA R A+L AG+ ++ ++ + R + K + +DG L++ + F+ M T
Sbjct: 807 EVCTVVARRAAQLCGAGMAAVVDRIREN--RGLDALKVTVGVDGTLYKLHPHFAKVMHET 864
Query: 243 VKELLGEEVSETVVIEHSNDGSGIG 267
VK+L + V S DGSG G
Sbjct: 865 VKDLAPK---CDVSFLQSEDGSGKG 886
>pdb|1BG3|A Chain A, Rat Brain Hexokinase Type I Complex With Glucose And
Inhibitor Glucose-6-Phosphate
pdb|1BG3|B Chain B, Rat Brain Hexokinase Type I Complex With Glucose And
Inhibitor Glucose-6-Phosphate
Length = 918
Score = 137 bits (346), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 138/267 (51%), Gaps = 18/267 (6%)
Query: 6 LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM 65
D+ V A+VNDT+GT+ Y +I+GTGTNA Y+E + G G+M
Sbjct: 647 FDLDVVAVVNDTVGTMMTCAYEEPTCEIGLIVGTGTNACYMEEMKNVEMVEG---NQGQM 703
Query: 66 VINMEWGNFRSSHL---PLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAE 122
INMEWG F + T++D+ +D SLN G+Q FEK+ISGMYLGEIVR +L +
Sbjct: 704 CINMEWGAFGDNGCLDDIRTDFDKVVDEYSLNSGKQRFEKMISGMYLGEIVRNILIDFTK 763
Query: 123 EANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEI--SNTSLKMRKL 180
+ F + LK I T +S + D R+ +++ IL+ N++ L
Sbjct: 764 KGFLFRGQISEPLKTRGIFETKFLSQIESD-----RLALLQVRAILQQLGLNSTCDDSIL 818
Query: 181 VVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQ 240
V +C +V+ R A+L AG+ +++K+ + R + + +DG L++ + FS M
Sbjct: 819 VKTVCGVVSKRAAQLCGAGMAAVVEKIREN--RGLDHLNVTVGVDGTLYKLHPHFSRIMH 876
Query: 241 STVKELLGEEVSETVVIEHSNDGSGIG 267
TVKEL TV S DGSG G
Sbjct: 877 QTVKEL---SPKCTVSFLLSEDGSGKG 900
Score = 130 bits (327), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 131/250 (52%), Gaps = 23/250 (9%)
Query: 7 DMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMV 66
D + A+VNDT+GT+ Y ++ +I+GTGTNA Y+E I G G M
Sbjct: 200 DANIVAVVNDTVGTMMTCGYDDQQCEVGLIIGTGTNACYMEELRHIDLVEG---DEGRMC 256
Query: 67 INMEWGNFR---SSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEE 123
IN EWG F S TE+D LD SLNPG+Q+FEK++SGMY+GE+VR +L +MA+E
Sbjct: 257 INTEWGAFGDDGSLEDIRTEFDRELDRGSLNPGKQLFEKMVSGMYMGELVRLILVKMAKE 316
Query: 124 ANFFGDTVPPKLKIPFILRTPHMSAMHHD------TSPDLRVVGKKLKDILEISNTSLKM 177
F + P+L T +SA+ D L +G + D+ +S
Sbjct: 317 GLLFEGRITPELLTRGKFNTSDVSAIEKDKEGIQNAKEILTRLGVEPSDVDCVS------ 370
Query: 178 RKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSA 237
V +C IV+ R A L AA + IL +L RD + + ++ + +DG L++ + ++S
Sbjct: 371 ---VQHICTIVSFRSANLVAATLGAILNRL-RDN-KGTPRLRTTVGVDGSLYKMHPQYSR 425
Query: 238 CMQSTVKELL 247
T++ L+
Sbjct: 426 RFHKTLRRLV 435
>pdb|3B8A|X Chain X, Crystal Structure Of Yeast Hexokinase Pi In Complex With
Glucose
Length = 485
Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 141/274 (51%), Gaps = 24/274 (8%)
Query: 6 LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLL----PK 61
L + + AL+NDT+GTL Y + + VI GTG N A+ + I K G L P
Sbjct: 201 LPIEIVALINDTVGTLIASYYTDPETKMGVIFGTGVNGAFYDVVSDIEKLEGKLADDIPS 260
Query: 62 SGEMVINMEWGNFRSSHL--PLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCR 119
+ M IN E+G+F + HL P T+YD A+D +S PG+Q FEK+ SG YLGE++R VL
Sbjct: 261 NSPMAINCEYGSFDNEHLVLPRTKYDVAVDEQSPRPGQQAFEKMTSGYYLGELLRLVLLE 320
Query: 120 MAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEIS---NTSLK 176
+ E+ D KLK P+I+ T + + + D +L + DI + T+L
Sbjct: 321 LNEKGLMLKDQDLSKLKQPYIMDTSYPARIEDDPFENL----EDTDDIFQKDFGVKTTLP 376
Query: 177 MRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFS 236
RKL+ LC+++ TR ARL+ GI I +K G T IA DG ++ Y F
Sbjct: 377 ERKLIRRLCELIGTRAARLAVCGIAAICQKRGYKTGH--------IAADGSVYNKYPGFK 428
Query: 237 ACMQSTVKELL---GEEVSETVVIEHSNDGSGIG 267
++++ G+ + + I + DGSG G
Sbjct: 429 EAAAKGLRDIYGWTGDASKDPITIVPAEDGSGAG 462
>pdb|1DGK|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I With
Glucose And Adp In The Active Site
Length = 917
Score = 134 bits (336), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 135/267 (50%), Gaps = 18/267 (6%)
Query: 6 LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM 65
D+ V A+VNDT+GT+ Y +I+GTG+NA Y+E + G G+M
Sbjct: 647 FDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEG---DQGQM 703
Query: 66 VINMEWGNFRSSHL---PLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAE 122
INMEWG F + T YD +D SLN G+Q +EK+ISGMYLGEIVR +L +
Sbjct: 704 CINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTK 763
Query: 123 EANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEI--SNTSLKMRKL 180
+ F + LK I T +S + D R+ +++ IL+ N++ L
Sbjct: 764 KGFLFRGQISETLKTRGIFETKFLSQIESD-----RLALLQVRAILQQLGLNSTCDDSIL 818
Query: 181 VVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQ 240
V +C +V+ R A+L AG+ ++ K+ + R ++ + +DG L++ + FS M
Sbjct: 819 VKTVCGVVSRRAAQLCGAGMAAVVDKIREN--RGLDRLNVTVGVDGTLYKLHPHFSRIMH 876
Query: 241 STVKELLGEEVSETVVIEHSNDGSGIG 267
TVKEL V S DGSG G
Sbjct: 877 QTVKEL---SPKCNVSFLLSEDGSGKG 900
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 149/293 (50%), Gaps = 24/293 (8%)
Query: 2 ERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPK 61
+R D + A+VNDT+GT+ Y ++ +I+GTGTNA Y+E I G
Sbjct: 195 KRGDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEG---D 251
Query: 62 SGEMVINMEWGNFR---SSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLC 118
G M IN EWG F S TE+D A+D SLNPG+Q+FEK++SGMYLGE+VR +L
Sbjct: 252 EGRMCINTEWGAFGDDGSLEDIRTEFDRAIDAYSLNPGKQLFEKMVSGMYLGELVRLILV 311
Query: 119 RMAEEANFFGDTVPPKLKIPFILRTPHMSAMH------HDTSPDLRVVGKKLKDILEISN 172
+MA+E F + P+L T +SA+ H+ L +G + D +S
Sbjct: 312 KMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNAKEILTRLGVEPSDDDCVS- 370
Query: 173 TSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHY 232
V +C IV+ R A L AA + IL +L RD + + ++ + +DG L++ +
Sbjct: 371 --------VQHVCTIVSFRSANLVAATLGAILNRL-RDN-KGTPRLRTTVGVDGSLYKTH 420
Query: 233 TKFSACMQSTVKELLGEEVSETVVIEH-SNDGSGIGXXXXXXSHSQYLEVEES 284
++S T++ L+ + ++ E S G+ + Q+ ++EE+
Sbjct: 421 PQYSRRFHKTLRRLVPDSDVRFLLSESGSGKGAAMVTAVAYRLAEQHRQIEET 473
>pdb|1CZA|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I
Complexed With Glucose, Glucose-6-Phosphate, And Adp
Length = 917
Score = 134 bits (336), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 135/267 (50%), Gaps = 18/267 (6%)
Query: 6 LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM 65
D+ V A+VNDT+GT+ Y +I+GTG+NA Y+E + G G+M
Sbjct: 647 FDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEG---DQGQM 703
Query: 66 VINMEWGNFRSSHL---PLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAE 122
INMEWG F + T YD +D SLN G+Q +EK+ISGMYLGEIVR +L +
Sbjct: 704 CINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTK 763
Query: 123 EANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEI--SNTSLKMRKL 180
+ F + LK I T +S + D R+ +++ IL+ N++ L
Sbjct: 764 KGFLFRGQISETLKTRGIFETKFLSQIESD-----RLALLQVRAILQQLGLNSTCDDSIL 818
Query: 181 VVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQ 240
V +C +V+ R A+L AG+ ++ K+ + R ++ + +DG L++ + FS M
Sbjct: 819 VKTVCGVVSRRAAQLCGAGMAAVVDKIREN--RGLDRLNVTVGVDGTLYKLHPHFSRIMH 876
Query: 241 STVKELLGEEVSETVVIEHSNDGSGIG 267
TVKEL V S DGSG G
Sbjct: 877 QTVKEL---SPKCNVSFLLSEDGSGKG 900
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 149/293 (50%), Gaps = 24/293 (8%)
Query: 2 ERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPK 61
+R D + A+VNDT+GT+ Y ++ +I+GTGTNA Y+E I G
Sbjct: 195 KRGDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEG---D 251
Query: 62 SGEMVINMEWGNFR---SSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLC 118
G M IN EWG F S TE+D A+D SLNPG+Q+FEK++SGMYLGE+VR +L
Sbjct: 252 EGRMCINTEWGAFGDDGSLEDIRTEFDRAIDAYSLNPGKQLFEKMVSGMYLGELVRLILV 311
Query: 119 RMAEEANFFGDTVPPKLKIPFILRTPHMSAMH------HDTSPDLRVVGKKLKDILEISN 172
+MA+E F + P+L T +SA+ H+ L +G + D +S
Sbjct: 312 KMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNAKEILTRLGVEPSDDDCVS- 370
Query: 173 TSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHY 232
V +C IV+ R A L AA + IL +L RD + + ++ + +DG L++ +
Sbjct: 371 --------VQHVCTIVSFRSANLVAATLGAILNRL-RDN-KGTPRLRTTVGVDGSLYKTH 420
Query: 233 TKFSACMQSTVKELLGEEVSETVVIEH-SNDGSGIGXXXXXXSHSQYLEVEES 284
++S T++ L+ + ++ E S G+ + Q+ ++EE+
Sbjct: 421 PQYSRRFHKTLRRLVPDSDVRFLLSESGSGKGAAMVTAVAYRLAEQHRQIEET 473
>pdb|1HKB|A Chain A, Crystal Structure Of Recombinant Human Brain Hexokinase
Type I Complexed With Glucose And Glucose-6-Phosphate
pdb|1HKB|B Chain B, Crystal Structure Of Recombinant Human Brain Hexokinase
Type I Complexed With Glucose And Glucose-6-Phosphate
Length = 917
Score = 134 bits (336), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 135/267 (50%), Gaps = 18/267 (6%)
Query: 6 LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM 65
D+ V A+VNDT+GT+ Y +I+GTG+NA Y+E + G G+M
Sbjct: 647 FDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEG---DQGQM 703
Query: 66 VINMEWGNFRSSHL---PLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAE 122
INMEWG F + T YD +D SLN G+Q +EK+ISGMYLGEIVR +L +
Sbjct: 704 CINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTK 763
Query: 123 EANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEI--SNTSLKMRKL 180
+ F + LK I T +S + D R+ +++ IL+ N++ L
Sbjct: 764 KGFLFRGQISETLKTRGIFETKFLSQIESD-----RLALLQVRAILQQLGLNSTCDDSIL 818
Query: 181 VVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQ 240
V +C +V+ R A+L AG+ ++ K+ + R ++ + +DG L++ + FS M
Sbjct: 819 VKTVCGVVSRRAAQLCGAGMAAVVDKIREN--RGLDRLNVTVGVDGTLYKLHPHFSRIMH 876
Query: 241 STVKELLGEEVSETVVIEHSNDGSGIG 267
TVKEL V S DGSG G
Sbjct: 877 QTVKEL---SPKCNVSFLLSEDGSGKG 900
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 146/288 (50%), Gaps = 24/288 (8%)
Query: 7 DMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMV 66
D + A+VNDT+GT+ Y ++ +I+GTGTNA Y+E I G G M
Sbjct: 200 DANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEG---DEGRMC 256
Query: 67 INMEWGNFR---SSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEE 123
IN EWG F S TE+D +D SLNPG+Q+FEK++SGMYLGE+VR +L +MA+E
Sbjct: 257 INTEWGAFGDDGSLEDIRTEFDREIDRGSLNPGKQLFEKMVSGMYLGELVRLILVKMAKE 316
Query: 124 ANFFGDTVPPKLKIPFILRTPHMSAMH------HDTSPDLRVVGKKLKDILEISNTSLKM 177
F + P+L T +SA+ H+ L +G + D +S
Sbjct: 317 GLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNAKEILTRLGVEPSDDDCVS------ 370
Query: 178 RKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSA 237
V +C IV+ R A L AA + IL +L RD + + ++ + +DG L++ + ++S
Sbjct: 371 ---VQHVCTIVSFRSANLVAATLGAILNRL-RDN-KGTPRLRTTVGVDGSLYKTHPQYSR 425
Query: 238 CMQSTVKELLGEEVSETVVIEH-SNDGSGIGXXXXXXSHSQYLEVEES 284
T++ L+ + ++ E S G+ + Q+ ++EE+
Sbjct: 426 RFHKTLRRLVPDSDVRFLLSESGSGKGAAMVTAVAYRLAEQHRQIEET 473
>pdb|1HKC|A Chain A, Recombinant Human Hexokinase Type I Complexed With Glucose
And Phosphate
pdb|1QHA|A Chain A, Human Hexokinase Type I Complexed With Atp Analogue
Amp-Pnp
pdb|1QHA|B Chain B, Human Hexokinase Type I Complexed With Atp Analogue
Amp-Pnp
Length = 917
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 135/267 (50%), Gaps = 18/267 (6%)
Query: 6 LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM 65
D+ V A+VNDT+GT+ Y +I+GTG+NA Y+E + G G+M
Sbjct: 647 FDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEG---DQGQM 703
Query: 66 VINMEWGNFRSSHL---PLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAE 122
INMEWG F + T YD ++ SLN G+Q +EK+ISGMYLGEIVR +L +
Sbjct: 704 CINMEWGAFGDNGCLDDIRTHYDRLVNEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTK 763
Query: 123 EANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEI--SNTSLKMRKL 180
+ F + LK I T +S + D R+ +++ IL+ N++ L
Sbjct: 764 KGFLFRGQISETLKTRGIFETKFLSQIESD-----RLALLQVRAILQQLGLNSTCDDSIL 818
Query: 181 VVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQ 240
V +C +V+ R A+L AG+ ++ K+ + R ++ + +DG L++ + FS M
Sbjct: 819 VKTVCGVVSRRAAQLCGAGMAAVVDKIREN--RGLDRLNVTVGVDGTLYKLHPHFSRIMH 876
Query: 241 STVKELLGEEVSETVVIEHSNDGSGIG 267
TVKEL V S DGSG G
Sbjct: 877 QTVKEL---SPKCNVSFLLSEDGSGKG 900
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 148/293 (50%), Gaps = 24/293 (8%)
Query: 2 ERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPK 61
+R D + A+VNDT+GT+ Y ++ +I+GTGTNA Y+E I G
Sbjct: 195 KRGDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEG---D 251
Query: 62 SGEMVINMEWGNFR---SSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLC 118
G M IN EWG F S TE+D +D SLNPG+Q+FEK++SGMYLGE+VR +L
Sbjct: 252 EGRMCINTEWGAFGDDGSLEDIRTEFDREIDRGSLNPGKQLFEKMVSGMYLGELVRLILV 311
Query: 119 RMAEEANFFGDTVPPKLKIPFILRTPHMSAMH------HDTSPDLRVVGKKLKDILEISN 172
+MA+E F + P+L T +SA+ H+ L +G + D +S
Sbjct: 312 KMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNAKEILTRLGVEPSDDDCVS- 370
Query: 173 TSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHY 232
V +C IV+ R A L AA + IL +L RD + + ++ + +DG L++ +
Sbjct: 371 --------VQHVCTIVSFRSANLVAATLGAILNRL-RDN-KGTPRLRTTVGVDGSLYKTH 420
Query: 233 TKFSACMQSTVKELLGEEVSETVVIEH-SNDGSGIGXXXXXXSHSQYLEVEES 284
++S T++ L+ + ++ E S G+ + Q+ ++EE+
Sbjct: 421 PQYSRRFHKTLRRLVPDSDVRFLLSESGSGKGAAMVTAVAYRLAEQHRQIEET 473
>pdb|3S41|A Chain A, Glucokinase In Complex With Activator And Glucose
pdb|4DHY|A Chain A, Crystal Structure Of Human Glucokinase In Complex With
Glucose And Activator
Length = 469
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 138/274 (50%), Gaps = 26/274 (9%)
Query: 3 RIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKS 62
R +M V A+VNDT+ T+ Y + +I+GTG NA Y+E + G
Sbjct: 196 RGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEG---DE 252
Query: 63 GEMVINMEWGNFRSS---HLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCR 119
G M +N EWG F S L EYD +D S NPG+Q++EK+I G Y+GE+VR VL R
Sbjct: 253 GRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLR 312
Query: 120 MAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMR- 178
+ +E F +L+ T +S + DT K++ +IL ++L +R
Sbjct: 313 LVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDR-----KQIYNIL----STLGLRP 363
Query: 179 -----KLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYT 233
+V C+ V+TR A + +AG+ G++ ++ R++ R + + + +DG +++ +
Sbjct: 364 STTDCDIVRRACESVSTRAAHMCSAGLAGVINRM-RES-RSEDVMRITVGVDGSVYKLHP 421
Query: 234 KFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 267
F ++V+ L E IE S +GSG G
Sbjct: 422 SFKERFHASVRRLTPS--CEITFIE-SEEGSGRG 452
>pdb|3FR0|A Chain A, Human Glucokinase In Complex With 2-Amino Benzamide
Activator
pdb|3A0I|X Chain X, Human Glucokinase In Complex With A Synthetic Activator
pdb|3GOI|A Chain A, Human Glucokinase In Complex With A Synthetic Activator
Length = 455
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 138/274 (50%), Gaps = 26/274 (9%)
Query: 3 RIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKS 62
R +M V A+VNDT+ T+ Y + +I+GTG NA Y+E + G
Sbjct: 182 RGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEG---DE 238
Query: 63 GEMVINMEWGNFRSS---HLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCR 119
G M +N EWG F S L EYD +D S NPG+Q++EK+I G Y+GE+VR VL R
Sbjct: 239 GRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLR 298
Query: 120 MAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMR- 178
+ +E F +L+ T +S + DT K++ +IL ++L +R
Sbjct: 299 LVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDR-----KQIYNIL----STLGLRP 349
Query: 179 -----KLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYT 233
+V C+ V+TR A + +AG+ G++ ++ R++ R + + + +DG +++ +
Sbjct: 350 STTDCDIVRRACESVSTRAAHMCSAGLAGVINRM-RES-RSEDVMRITVGVDGSVYKLHP 407
Query: 234 KFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 267
F ++V+ L E IE S +GSG G
Sbjct: 408 SFKERFHASVRRLTPS--CEITFIE-SEEGSGRG 438
>pdb|1V4S|A Chain A, Crystal Structure Of Human Glucokinase
pdb|3VEY|A Chain A, Glucokinase In Complex With Glucose And Atpgs
Length = 455
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 138/274 (50%), Gaps = 26/274 (9%)
Query: 3 RIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKS 62
R +M V A+VNDT+ T+ Y + +I+GTG NA Y+E + G
Sbjct: 182 RGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEG---DE 238
Query: 63 GEMVINMEWGNFRSS---HLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCR 119
G M +N EWG F S L EYD +D S NPG+Q++EK+I G Y+GE+VR VL R
Sbjct: 239 GRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLR 298
Query: 120 MAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMR- 178
+ +E F +L+ T +S + DT K++ +IL ++L +R
Sbjct: 299 LVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDR-----KQIYNIL----STLGLRP 349
Query: 179 -----KLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYT 233
+V C+ V+TR A + +AG+ G++ ++ R++ R + + + +DG +++ +
Sbjct: 350 STTDCDIVRRACESVSTRAAHMCSAGLAGVINRM-RES-RSEDVMRITVGVDGSVYKLHP 407
Query: 234 KFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 267
F ++V+ L E IE S +GSG G
Sbjct: 408 SFKERFHASVRRLTPS--CEITFIE-SEEGSGRG 438
>pdb|3F9M|A Chain A, Human Pancreatic Glucokinase In Complex With Glucose And
Activator Showing A Mobile Flap
pdb|3FGU|A Chain A, Catalytic Complex Of Human Glucokinase
pdb|3ID8|A Chain A, Ternary Complex Of Human Pancreatic Glucokinase
Crystallized With Activator, Glucose And Amp-Pnp
pdb|3IDH|A Chain A, Human Pancreatic Glucokinase In Complex With Glucose
pdb|3VEV|A Chain A, Glucokinase In Complex With An Activator And Glucose
pdb|3VF6|A Chain A, Glucokinase In Complex With Glucose And Activator
Length = 470
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 138/274 (50%), Gaps = 26/274 (9%)
Query: 3 RIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKS 62
R +M V A+VNDT+ T+ Y + +I+GTG NA Y+E + G
Sbjct: 197 RGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEG---DE 253
Query: 63 GEMVINMEWGNFRSS---HLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCR 119
G M +N EWG F S L EYD +D S NPG+Q++EK+I G Y+GE+VR VL R
Sbjct: 254 GRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLR 313
Query: 120 MAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMR- 178
+ +E F +L+ T +S + DT K++ +IL ++L +R
Sbjct: 314 LVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDR-----KQIYNIL----STLGLRP 364
Query: 179 -----KLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYT 233
+V C+ V+TR A + +AG+ G++ ++ R++ R + + + +DG +++ +
Sbjct: 365 STTDCDIVRRACESVSTRAAHMCSAGLAGVINRM-RES-RSEDVMRITVGVDGSVYKLHP 422
Query: 234 KFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 267
F ++V+ L E IE S +GSG G
Sbjct: 423 SFKERFHASVRRLTPS--CEITFIE-SEEGSGRG 453
>pdb|4DCH|A Chain A, Insights Into Glucokinase Activation Mechanism:
Observation Of Multiple Distinct Protein Conformations
Length = 473
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 138/274 (50%), Gaps = 26/274 (9%)
Query: 3 RIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKS 62
R +M V A+VNDT+ T+ Y + +I+GTG NA Y+E + G
Sbjct: 192 RGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEG---DE 248
Query: 63 GEMVINMEWGNFRSS---HLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCR 119
G M +N EWG F S L EYD +D S NPG+Q++EK+I G Y+GE+VR VL R
Sbjct: 249 GRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLR 308
Query: 120 MAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMR- 178
+ +E F +L+ T +S + DT K++ +IL ++L +R
Sbjct: 309 LVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDR-----KQIYNIL----STLGLRP 359
Query: 179 -----KLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYT 233
+V C+ V+TR A + +AG+ G++ ++ R++ R + + + +DG +++ +
Sbjct: 360 STTDCDIVRRACESVSTRAAHMCSAGLAGVINRM-RES-RSEDVMRITVGVDGSVYKLHP 417
Query: 234 KFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 267
F ++V+ L E IE S +GSG G
Sbjct: 418 SFKERFHASVRRLTPS--CEITFIE-SEEGSGRG 448
>pdb|3IMX|A Chain A, Crystal Structure Of Human Glucokinase In Complex With A
Synthetic Activator
Length = 455
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 138/274 (50%), Gaps = 26/274 (9%)
Query: 3 RIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKS 62
R +M V A+VNDT+ T+ Y + +I+GTG NA Y+E + G
Sbjct: 182 RGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEG---DE 238
Query: 63 GEMVINMEWGNFRSS---HLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCR 119
G M +N EWG F S L EYD +D S NPG+Q++EK+I G Y+GE+VR VL R
Sbjct: 239 GRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLR 298
Query: 120 MAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMR- 178
+ +E F +L+ T +S + DT K++ +IL ++L +R
Sbjct: 299 LVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDR-----KQIYNIL----STLGLRP 349
Query: 179 -----KLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYT 233
+V C+ V+TR A + +AG+ G++ ++ R++ R + + + +DG +++ +
Sbjct: 350 STTDCDIVRRACESVSTRAAHMCSAGLAGVINRM-RES-RSEDVMRITVGVDGSVYKLHP 407
Query: 234 KFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 267
F ++V+ L E IE S +GSG G
Sbjct: 408 SFKERFHASVRRLT--PSCEITFIE-SEEGSGRG 438
>pdb|1V4T|A Chain A, Crystal Structure Of Human Glucokinase
pdb|3H1V|X Chain X, Human Glucokinase In Complex With A Synthetic Activator
Length = 451
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 138/274 (50%), Gaps = 26/274 (9%)
Query: 3 RIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKS 62
R +M V A+VNDT+ T+ Y + +I+GTG NA Y+E + G
Sbjct: 178 RGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEG---DE 234
Query: 63 GEMVINMEWGNFRSS---HLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCR 119
G M +N EWG F S L EYD +D S NPG+Q++EK+I G Y+GE+VR VL R
Sbjct: 235 GRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLR 294
Query: 120 MAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMR- 178
+ +E F +L+ T +S + DT K++ +IL ++L +R
Sbjct: 295 LVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDR-----KQIYNIL----STLGLRP 345
Query: 179 -----KLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYT 233
+V C+ V+TR A + +AG+ G++ ++ R++ R + + + +DG +++ +
Sbjct: 346 STTDCDIVRRACESVSTRAAHMCSAGLAGVINRM-RES-RSEDVMRITVGVDGSVYKLHP 403
Query: 234 KFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 267
F ++V+ L E IE S +GSG G
Sbjct: 404 SFKERFHASVRRLTPS--CEITFIE-SEEGSGRG 434
>pdb|3QIC|A Chain A, The Structure Of Human Glucokinase E339k Mutation
Length = 470
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 138/274 (50%), Gaps = 26/274 (9%)
Query: 3 RIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKS 62
R +M V A+VNDT+ T+ Y + +I+GTG NA Y+E + G
Sbjct: 197 RGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEG---DE 253
Query: 63 GEMVINMEWGNFRSS---HLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCR 119
G M +N EWG F S L EYD +D S NPG+Q++EK+I G Y+GE+VR VL R
Sbjct: 254 GRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLR 313
Query: 120 MAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMR- 178
+ +E F +L+ T +S + DT K++ +IL ++L +R
Sbjct: 314 LVDENLLFHGEASEQLRTRGAFETRFVSQVKSDTGDR-----KQIYNIL----STLGLRP 364
Query: 179 -----KLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYT 233
+V C+ V+TR A + +AG+ G++ ++ R++ R + + + +DG +++ +
Sbjct: 365 STTDCDIVRRACESVSTRAAHMCSAGLAGVINRM-RES-RSEDVMRITVGVDGXVYKLHP 422
Query: 234 KFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 267
F ++V+ L E IE S +GSG G
Sbjct: 423 SFKERFHASVRRLT--PSCEITFIE-SEEGSGRG 453
>pdb|2CNC|A Chain A, Family 10 Xylanase
Length = 386
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 178 RKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDG-GLFEHYTKFS 236
R+ VE+ + + RG + GI G LG DT E +KS+IA GL H+T
Sbjct: 217 REATVEMIERLQKRGMPIHGLGIQG---HLGIDTPPIAEIEKSIIAFAKLGLRVHFTSLD 273
Query: 237 ACMQSTVKELLGEEVS 252
+ +V EL EVS
Sbjct: 274 VDVLPSVWELPVAEVS 289
>pdb|1UQY|A Chain A, Xylanase Xyn10b Mutant (E262s) From Cellvibrio Mixtus In
Complex With Xylopentaose
pdb|1UQZ|A Chain A, Xylanase Xyn10b Mutant (E262s) From Cellvibrio Mixtus In
Complex With 4-O-Methyl Glucuronic Acid
pdb|1UR1|A Chain A, Xylanase Xyn10b Mutant (E262s) From Cellvibrio Mixtus In
Complex With Arabinofuranose Alpha-1,3 Linked To
Xylobiose
pdb|1UR2|A Chain A, Xylanase Xyn10b Mutant (E262s) From Cellvibrio Mixtus In
Complex With Arabinofuranose Alpha 1,3 Linked To
Xylotriose
Length = 378
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 178 RKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDG-GLFEHYTKFS 236
R+ VE+ + + RG + GI G LG DT E +KS+IA GL H+T
Sbjct: 208 REATVEMIERLQKRGMPIHGLGIQG---HLGIDTPPIAEIEKSIIAFAKLGLRVHFTSLD 264
Query: 237 ACMQSTVKELLGEEVS 252
+ +V EL EVS
Sbjct: 265 VDVLPSVWELPVAEVS 280
>pdb|2CFM|A Chain A, Atp-Dependent Dna Ligase From Pyrococcus Furiosus
Length = 561
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 18/121 (14%)
Query: 54 KWHGLLPKSGEM---VINMEWGNFRSSHL----PLTEYD----EALDTESLNPGEQI--- 99
KW + P + +I EWG R +HL L YD E L+ + G
Sbjct: 417 KWLKIKPTXENLDLVIIGAEWGEGRRAHLFGSFILGAYDPETGEFLEVGKVGSGFTDDDL 476
Query: 100 --FEKIISGMYLGEIVRRVLC--RMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSP 155
F K + + + E +RV ++ E + PK + F LR P A+ D P
Sbjct: 477 VEFTKXLKPLIIKEEGKRVWLQPKVVIEVTYQEIQKSPKYRSGFALRFPRFVALRDDKGP 536
Query: 156 D 156
+
Sbjct: 537 E 537
>pdb|1BWY|A Chain A, Nmr Study Of Bovine Heart Fatty Acid Binding Protein
Length = 132
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 210 DTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELL 247
+T D K KS++ LDGG H K++ S V+E++
Sbjct: 72 ETTADDRKVKSIVTLDGGKLVHVQKWNGQETSLVREMV 109
>pdb|3RSW|A Chain A, Crystal Structure Of Heart Fatty Acid Binding Protein
(Fabp3)
pdb|3RSW|B Chain B, Crystal Structure Of Heart Fatty Acid Binding Protein
(Fabp3)
Length = 158
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 210 DTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELL 247
+T D K KS++ LDGG H K+ + V+EL+
Sbjct: 98 ETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELI 135
>pdb|1G5W|A Chain A, Solution Structure Of Human Heart-Type Fatty Acid Binding
Protein
pdb|1HMR|A Chain A, 1.4 Angstroms Structural Studies On Human Muscle Fatty
Acid Binding Protein: Binding Interactions With Three
Saturated And Unsaturated C18 Fatty Acids
pdb|1HMS|A Chain A, 1.4 Angstroms Structural Studies On Human Muscle Fatty
Acid Binding Protein: Binding Interactions With Three
Saturated And Unsaturated C18 Fatty Acids
pdb|1HMT|A Chain A, 1.4 Angstroms Structural Studies On Human Muscle Fatty
Acid Binding Protein: Binding Interactions With Three
Saturated And Unsaturated C18 Fatty Acids
pdb|2HMB|A Chain A, Three-dimensional Structure Of Recombinant Human Muscle
Fatty Acid-binding Protein
Length = 132
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 210 DTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELL 247
+T D K KS++ LDGG H K+ + V+EL+
Sbjct: 72 ETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELI 109
>pdb|3RR5|A Chain A, Dna Ligase From The Archaeon Thermococcus Sp. 1519
Length = 570
Score = 27.3 bits (59), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 20/122 (16%)
Query: 54 KWHGLLPKSGEM---VINMEWGNFRSSHLPLTEYDEALDTES--LNPGEQI--------- 99
KW + P + +I EWG R +HL + A D +S P ++
Sbjct: 428 KWLKIKPTMENLDLVIIGAEWGEGRRAHLLGSFLVAAYDPDSGEFLPVGKVGSGFTDEDL 487
Query: 100 --FEKIISGMYL---GEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTS 154
F K++ + L G+ V + ++ E + PK + F LR P A+ D S
Sbjct: 488 VEFTKMLKPLILREEGKFVE-IEPKVVIEVTYQEIQKSPKYRSGFALRFPRYVALREDKS 546
Query: 155 PD 156
P+
Sbjct: 547 PE 548
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,227,468
Number of Sequences: 62578
Number of extensions: 331023
Number of successful extensions: 915
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 805
Number of HSP's gapped (non-prelim): 40
length of query: 284
length of database: 14,973,337
effective HSP length: 98
effective length of query: 186
effective length of database: 8,840,693
effective search space: 1644368898
effective search space used: 1644368898
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)