BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023320
(284 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224134967|ref|XP_002327534.1| predicted protein [Populus trichocarpa]
gi|222836088|gb|EEE74509.1| predicted protein [Populus trichocarpa]
Length = 281
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/284 (70%), Positives = 230/284 (80%), Gaps = 12/284 (4%)
Query: 3 HPPYDPYY-LPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPG 61
H PYDPYY LPP P + ++GINTLFVSGLPDDV+AREIHN+FRR+PG
Sbjct: 6 HQPYDPYYQLPPAAAAPG---------GEWNSGINTLFVSGLPDDVKAREIHNIFRRRPG 56
Query: 62 FDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
FD CQLKYTGRGNQVVAFATF NHQ+A+AALH LNGVKFDPQSGS LHIELARSNSR+KR
Sbjct: 57 FDSCQLKYTGRGNQVVAFATFFNHQSAIAALHSLNGVKFDPQSGSTLHIELARSNSRRKR 116
Query: 122 KPGSGAYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDS 181
KPGSGAYVVIDKRTK ++ E+SS D +SD +E + N+D+A +GD +SE A+D
Sbjct: 117 KPGSGAYVVIDKRTKKPSDAHETSSDDVESDPEEDPEMNNVDTAYQGDSENAKSEAASDP 176
Query: 182 GNAVAPINS--EKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM 239
NA +N E+ EGGV+PCSTLFIANLGPNCTEDELKQ LS YPGF++LK+RA+GGM
Sbjct: 177 DNAAVAVNEIGERTAEGGVRPCSTLFIANLGPNCTEDELKQVLSQYPGFHVLKIRAKGGM 236
Query: 240 PVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKMRK 283
PVAFADFEE+EQA+ ME LQ++TLPSSDRGGMHIEYARSKMRK
Sbjct: 237 PVAFADFEEIEQATKVMENLQETTLPSSDRGGMHIEYARSKMRK 280
>gi|356526031|ref|XP_003531623.1| PREDICTED: uncharacterized protein LOC100783764 [Glycine max]
Length = 264
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/285 (69%), Positives = 218/285 (76%), Gaps = 24/285 (8%)
Query: 1 MAHPPYDPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKP 60
MA PP+DP+YL Y H +Q N INTLFVSGLPDDV+AREIHNLFRR+P
Sbjct: 1 MAQPPFDPFYL--------------YQHDEQSN-INTLFVSGLPDDVKAREIHNLFRRRP 45
Query: 61 GFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKK 120
GFD CQLKYTGR NQVVAFATF NHQ+A+AALH LNGVKFDPQ+GSVLHIELARSNSR+K
Sbjct: 46 GFDSCQLKYTGRANQVVAFATFFNHQSAMAALHALNGVKFDPQTGSVLHIELARSNSRRK 105
Query: 121 RKPGSGAYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSAD-KGDF-VTTQSERA 178
RKPGSGAYVVIDKR+K E ++Q SSS DGDSD DE S DS D +GD + T E A
Sbjct: 106 RKPGSGAYVVIDKRSKGEPDLQGSSSEDGDSDPDEPS-----DSGDNQGDLAIMTSDETA 160
Query: 179 TDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGG 238
S NAV+ K GG+ CSTLFIANLGPNCTEDELKQ S Y GFNM+KMR+RGG
Sbjct: 161 VGSDNAVSVEQHGKGSTGGL--CSTLFIANLGPNCTEDELKQAFSAYTGFNMVKMRSRGG 218
Query: 239 MPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKMRK 283
MPVAF DFEE QA+ ME LQ S LPSSDRGGMHIEYARSKMRK
Sbjct: 219 MPVAFVDFEETHQAAKVMEELQGSLLPSSDRGGMHIEYARSKMRK 263
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+TLF++ L + E+ F GF+ +++ RG VAF F A + E
Sbjct: 181 CSTLFIANLGPNCTEDELKQAFSAYTGFNMVKMR--SRGGMPVAFVDFEETHQAAKVMEE 238
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKK 120
L G +HIE ARS RK+
Sbjct: 239 LQGSLLPSSDRGGMHIEYARSKMRKR 264
>gi|225442319|ref|XP_002279868.1| PREDICTED: uncharacterized protein LOC100263499 [Vitis vinifera]
gi|297743102|emb|CBI35969.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/287 (68%), Positives = 223/287 (77%), Gaps = 20/287 (6%)
Query: 1 MAHPPYDPYYLPPIHPPPPPVPPPPYHHQQQD-NGINTLFVSGLPDDVRAREIHNLFRRK 59
M+H YDPYY HH Q D +GINTLFVSGLPDDV+ REIHNLFRR+
Sbjct: 1 MSHHAYDPYY----------------HHAQGDRSGINTLFVSGLPDDVKPREIHNLFRRR 44
Query: 60 PGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRK 119
PGFD CQLKYTGRGNQVVAFATF NHQTAVAALH LNGVKFDPQ+GS+LHIELARSNSR+
Sbjct: 45 PGFDSCQLKYTGRGNQVVAFATFFNHQTAVAALHALNGVKFDPQTGSILHIELARSNSRR 104
Query: 120 KRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQS-ERA 178
KR PGSGAYVVIDKR+KT N E+SS DGDS++DE + N DS + D VT +S E A
Sbjct: 105 KRVPGSGAYVVIDKRSKTSTNAHETSSDDGDSESDEPAKTSNPDSGNNDDLVTAKSGEMA 164
Query: 179 TDSGNAVAPINS--EKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR 236
D + + +N EK + G+ PCSTLFIANLGP CTEDELKQ LS YPGFN+LKMRA+
Sbjct: 165 VDPDSTLTAVNEQPEKTTDAGLPPCSTLFIANLGPTCTEDELKQVLSQYPGFNVLKMRAK 224
Query: 237 GGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKMRK 283
GGMPVAFADFEE+EQA+ AM+ LQ S L SSDRGGMH+EYARSKMRK
Sbjct: 225 GGMPVAFADFEEIEQANKAMDALQGSMLASSDRGGMHLEYARSKMRK 271
>gi|388496982|gb|AFK36557.1| unknown [Medicago truncatula]
Length = 268
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/262 (71%), Positives = 209/262 (79%), Gaps = 8/262 (3%)
Query: 26 YHHQQQD--NGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
Y+H QQD + INTLFVSGLPDDV+AREIHNLFRR+PGFD CQLKYTGR NQVVAFATF
Sbjct: 9 YYHYQQDERSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQVVAFATFF 68
Query: 84 NHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQE 143
NHQ A+ ALH LNGVKFDPQSGSVLHIELARSNSR+KRKPG GAYVVIDKR+K EANVQ
Sbjct: 69 NHQAAMQALHSLNGVKFDPQSGSVLHIELARSNSRRKRKPGGGAYVVIDKRSKGEANVQG 128
Query: 144 SSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEK--PYEGGVQPC 201
SSS DG+SD DE S + ++ GD T QS A + P+ + G PC
Sbjct: 129 SSSDDGESDPDEPSE----NGSNHGDIATAQSGDAVVGSDNHVPVARAQHGKGGGDGGPC 184
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQD 261
STLFIANLGPNCTEDELKQ LSVY GFN++KMR+RGGMPVAFADFEE++QA ME LQ
Sbjct: 185 STLFIANLGPNCTEDELKQALSVYAGFNLVKMRSRGGMPVAFADFEEIDQAVKVMEELQG 244
Query: 262 STLPSSDRGGMHIEYARSKMRK 283
S+LPSSDRGGMHIEYARS+MRK
Sbjct: 245 SSLPSSDRGGMHIEYARSRMRK 266
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
+TLF++ L + E+ GF+ +++ RG VAFA F AV + EL
Sbjct: 185 STLFIANLGPNCTEDELKQALSVYAGFNLVKMR--SRGGMPVAFADFEEIDQAVKVMEEL 242
Query: 96 NGVKFDPQSGSVLHIELARSNSRKKR 121
G +HIE ARS RKKR
Sbjct: 243 QGSSLPSSDRGGMHIEYARSRMRKKR 268
>gi|449447844|ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cucumis
sativus]
Length = 262
Score = 367 bits (941), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 191/284 (67%), Positives = 211/284 (74%), Gaps = 24/284 (8%)
Query: 1 MAHPPYDPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKP 60
MAH PYDPYYL P P Y + + INTLF+SGLPDDV+AREIHNLFRR+P
Sbjct: 1 MAHLPYDPYYLYN-------QPDPTY---SERSNINTLFISGLPDDVKAREIHNLFRRRP 50
Query: 61 GFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKK 120
GFD CQLKYTGRGNQVVAFATF NHQ+AV ALH LNGVKFDPQSGSVLHIELARSNSR+K
Sbjct: 51 GFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSRRK 110
Query: 121 RKPGSGAYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATD 180
KPG GAYVVIDKR KT+AN QE+SS DG S+ DE S +E
Sbjct: 111 HKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKK-----------AQQSNEAVVT 159
Query: 181 SGNAV-APINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM 239
NA+ AP + +GG PCSTLFIANLGPNC EDELK+ L YPGFN+LK+RA+ GM
Sbjct: 160 PANAISAPYEHHEKNDGG--PCSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGM 217
Query: 240 PVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKMRK 283
PVAFADFE++EQAS ME LQ S LPSSDRGGMHIEYARSKMRK
Sbjct: 218 PVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRK 261
>gi|449480586|ref|XP_004155937.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
B''-like [Cucumis sativus]
Length = 262
Score = 362 bits (930), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 190/284 (66%), Positives = 209/284 (73%), Gaps = 24/284 (8%)
Query: 1 MAHPPYDPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKP 60
MAH PYDPYYL P P Y + + INTLF+SGLPDDV+AREIHNLFRR+P
Sbjct: 1 MAHLPYDPYYLYN-------QPDPTY---SERSNINTLFISGLPDDVKAREIHNLFRRRP 50
Query: 61 GFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKK 120
GFD CQLKYTGRGNQVVAFATF NHQ+AV ALH LNGVKFDPQSGSVLHIELARSNSR+K
Sbjct: 51 GFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSRRK 110
Query: 121 RKPGSGAYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATD 180
KPG GAYVVIDKR K AN QE+SS DG S+ DE S +E
Sbjct: 111 HKPGGGAYVVIDKRKKPXANSQETSSDDGGSEPDEPSKK-----------AQQSNEAVVT 159
Query: 181 SGNAV-APINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM 239
NA+ AP + +GG PCSTLFIANLGPNC EDELK+ L YPGFN+LK+RA+ GM
Sbjct: 160 PANAISAPYEHHEKNDGG--PCSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGM 217
Query: 240 PVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKMRK 283
PVAFADFE++EQAS ME LQ S LPSSDRGGMHIEYARSKMRK
Sbjct: 218 PVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRK 261
>gi|363814370|ref|NP_001242824.1| uncharacterized protein LOC100810989 [Glycine max]
gi|255636681|gb|ACU18677.1| unknown [Glycine max]
Length = 265
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 194/285 (68%), Positives = 215/285 (75%), Gaps = 23/285 (8%)
Query: 1 MAHPPYDPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKP 60
MAHPP DPYYL Y Q + + INTLFVSGLPDDV+AREIHNLFRR+P
Sbjct: 1 MAHPPLDPYYL--------------YQQQDERSNINTLFVSGLPDDVKAREIHNLFRRRP 46
Query: 61 GFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKK 120
GFD CQLKYTGR NQVVAFATF NHQ+A+AALH LNGVKFDPQ+GSVLHIELARSNSR+K
Sbjct: 47 GFDSCQLKYTGRANQVVAFATFFNHQSAMAALHALNGVKFDPQTGSVLHIELARSNSRRK 106
Query: 121 RKPGSGAYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSAD-KGDF-VTTQSERA 178
RKPG A VVIDKR+ E ++Q SSS DGDSD DE S DS D +G+ + T E A
Sbjct: 107 RKPGGEACVVIDKRSTGEPDLQGSSSDDGDSDPDEPS-----DSGDNQGNIAIMTSDETA 161
Query: 179 TDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGG 238
S NAV+ K GG+ CSTLFIANLGPNCTEDELKQ SVY GFNM+KMR+RGG
Sbjct: 162 VGSDNAVSVEQHGKGSAGGL--CSTLFIANLGPNCTEDELKQAFSVYTGFNMVKMRSRGG 219
Query: 239 MPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKMRK 283
MPVAF DFEE +QA+ +E LQ S LPSSDRGGMHIEYARSKMRK
Sbjct: 220 MPVAFVDFEETDQAAKVVEELQGSLLPSSDRGGMHIEYARSKMRK 264
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
+TLF++ L + E+ F GF+ +++ RG VAF F A + EL
Sbjct: 183 STLFIANLGPNCTEDELKQAFSVYTGFNMVKMR--SRGGMPVAFVDFEETDQAAKVVEEL 240
Query: 96 NGVKFDPQSGSVLHIELARSNSRKK 120
G +HIE ARS RK+
Sbjct: 241 QGSLLPSSDRGGMHIEYARSKMRKR 265
>gi|186510039|ref|NP_001118622.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|26449895|dbj|BAC42069.1| unknown protein [Arabidopsis thaliana]
gi|332641880|gb|AEE75401.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 287
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 179/283 (63%), Positives = 213/283 (75%), Gaps = 2/283 (0%)
Query: 3 HPPYDPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGF 62
H PYDP+Y+ +H P +PP + INTLFVSGLP+DV+AREIHNLFRR+ GF
Sbjct: 4 HQPYDPFYVYQLHSHPHHLPPQLPLLADEPGAINTLFVSGLPNDVKAREIHNLFRRRHGF 63
Query: 63 DFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRK 122
+ CQLKYTGRG+QVVAFATF +H+ A+AA++ELNGVKFDPQ+GS LHIELARSNSR+K +
Sbjct: 64 ESCQLKYTGRGDQVVAFATFTSHRFALAAMNELNGVKFDPQTGSNLHIELARSNSRRKER 123
Query: 123 PGSGAYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSG 182
PGSG YVVID R K + Q+ S +GDSD DE N DS + D ++++ DS
Sbjct: 124 PGSGPYVVIDNRNKEISKSQDDQSDEGDSDPDEVQEPGNSDSPKENDTTKSEADSEPDSK 183
Query: 183 NAVAPINSEKPYEG--GVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMP 240
A + EK EG G + CSTLFIANLGPNCTEDELKQ LS YPGF++LK+RARGGMP
Sbjct: 184 APSANGHLEKASEGGSGARACSTLFIANLGPNCTEDELKQLLSRYPGFHILKIRARGGMP 243
Query: 241 VAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKMRK 283
VAFADFEE+EQA+ AM LQ + L SSDRGGMHIEYARSKMRK
Sbjct: 244 VAFADFEEIEQATDAMNHLQGNLLSSSDRGGMHIEYARSKMRK 286
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+TLF++ L + E+ L R PGF LK RG VAFA F + A A++
Sbjct: 204 CSTLFIANLGPNCTEDELKQLLSRYPGFHI--LKIRARGGMPVAFADFEEIEQATDAMNH 261
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKK 120
L G +HIE ARS RK+
Sbjct: 262 LQGNLLSSSDRGGMHIEYARSKMRKQ 287
>gi|297834202|ref|XP_002884983.1| hypothetical protein ARALYDRAFT_478769 [Arabidopsis lyrata subsp.
lyrata]
gi|297330823|gb|EFH61242.1| hypothetical protein ARALYDRAFT_478769 [Arabidopsis lyrata subsp.
lyrata]
Length = 287
Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 179/283 (63%), Positives = 213/283 (75%), Gaps = 2/283 (0%)
Query: 3 HPPYDPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGF 62
H PYDP+Y+ H P +PP + INTLFVSGLP+DV+AREIHNLFRR+ GF
Sbjct: 4 HQPYDPFYVYQPHYHPHHLPPQLPQFADEPGAINTLFVSGLPNDVKAREIHNLFRRRYGF 63
Query: 63 DFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRK 122
+ CQLKYTGRG+QVVAFATF +H+ A+AA++ELNGVKFDPQ+GS LHIELARSNSR+K +
Sbjct: 64 ESCQLKYTGRGDQVVAFATFTSHRFAMAAMNELNGVKFDPQTGSTLHIELARSNSRRKER 123
Query: 123 PGSGAYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSG 182
PGSG YVVID R K + Q+ S +GDSD DE RN +S + D ++++ DS
Sbjct: 124 PGSGPYVVIDNRNKELSKSQDDQSDEGDSDPDEVQEPRNSESPKENDNAKSEADSEPDSK 183
Query: 183 NAVAPINSEKPYEG--GVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMP 240
A + EK YEG G + CSTLFIANLGPNCTEDEL+Q LS Y GFN+LK+RARGGMP
Sbjct: 184 APSANGHLEKAYEGGSGARACSTLFIANLGPNCTEDELRQLLSRYSGFNILKIRARGGMP 243
Query: 241 VAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKMRK 283
VAFADFEE+EQA+ AM LQ + L SSDRGGMHIEYARSKMRK
Sbjct: 244 VAFADFEEIEQATDAMNELQGNLLSSSDRGGMHIEYARSKMRK 286
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+TLF++ L + E+ L R GF+ LK RG VAFA F + A A++E
Sbjct: 204 CSTLFIANLGPNCTEDELRQLLSRYSGFNI--LKIRARGGMPVAFADFEEIEQATDAMNE 261
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKK 120
L G +HIE ARS RK+
Sbjct: 262 LQGNLLSSSDRGGMHIEYARSKMRKQ 287
>gi|15231331|ref|NP_187983.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332641879|gb|AEE75400.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 296
Score = 323 bits (827), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 171/293 (58%), Positives = 205/293 (69%), Gaps = 20/293 (6%)
Query: 3 HPPYDPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGF 62
H PYDP+Y+ +H P +PP + INTLFVSGLP+DV+AREIHNLFRR+ GF
Sbjct: 4 HQPYDPFYVYQLHSHPHHLPPQLPLLADEPGAINTLFVSGLPNDVKAREIHNLFRRRHGF 63
Query: 63 DFCQLKYTGRGNQV------------------VAFATFVNHQTAVAALHELNGVKFDPQS 104
+ CQLKYTGRG+QV VAFATF +H+ A+AA++ELNGVKFDPQ+
Sbjct: 64 ESCQLKYTGRGDQVCKNLQFLFFFIPIFRKAVVAFATFTSHRFALAAMNELNGVKFDPQT 123
Query: 105 GSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDS 164
GS LHIELARSNSR+K +PGSG YVVID R K + Q+ S +GDSD DE N DS
Sbjct: 124 GSNLHIELARSNSRRKERPGSGPYVVIDNRNKEISKSQDDQSDEGDSDPDEVQEPGNSDS 183
Query: 165 ADKGDFVTTQSERATDSGNAVAPINSEKPYEGG--VQPCSTLFIANLGPNCTEDELKQTL 222
+ D ++++ DS A + EK EGG + CSTLFIANLGPNCTEDELKQ L
Sbjct: 184 PKENDTTKSEADSEPDSKAPSANGHLEKASEGGSGARACSTLFIANLGPNCTEDELKQLL 243
Query: 223 SVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIE 275
S YPGF++LK+RARGGMPVAFADFEE+EQA+ AM LQ + L SSDRGGMHIE
Sbjct: 244 SRYPGFHILKIRARGGMPVAFADFEEIEQATDAMNHLQGNLLSSSDRGGMHIE 296
>gi|255572977|ref|XP_002527419.1| RNA binding protein, putative [Ricinus communis]
gi|223533229|gb|EEF34985.1| RNA binding protein, putative [Ricinus communis]
Length = 206
Score = 273 bits (697), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 141/205 (68%), Positives = 157/205 (76%), Gaps = 13/205 (6%)
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDS 151
+H LNGVKFDPQSGS LHIELARSNSR+ RKPGSGAYVVIDKRT+ +N QE+SS G S
Sbjct: 1 MHSLNGVKFDPQSGSTLHIELARSNSRRVRKPGSGAYVVIDKRTQQASNAQETSSDYGGS 60
Query: 152 DTDEASPVR------------NIDSADKGDFVTTQSERATDSGNAVAPIN-SEKPYEGGV 198
D+DE + N DSA++GD + +SE A D NA N SEK EGGV
Sbjct: 61 DSDETAAPAPAPAPAPTTATDNTDSANQGDLMNVKSEPAGDPDNASVLANESEKTAEGGV 120
Query: 199 QPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEG 258
PCSTLFIANLGPNCTEDEL+ TLS YPGFN+LKMRA+GGMPVAFADFEE+EQA AME
Sbjct: 121 HPCSTLFIANLGPNCTEDELRHTLSQYPGFNVLKMRAKGGMPVAFADFEEIEQAIKAMED 180
Query: 259 LQDSTLPSSDRGGMHIEYARSKMRK 283
LQ + LPSSDRGGMHIEYARSKMRK
Sbjct: 181 LQGTLLPSSDRGGMHIEYARSKMRK 205
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+TLF++ L + E+ + + PGF+ LK +G VAFA F + A+ A+ +
Sbjct: 123 CSTLFIANLGPNCTEDELRHTLSQYPGFNV--LKMRAKGGMPVAFADFEEIEQAIKAMED 180
Query: 95 LNGVKFDPQSGSVLHIELARSNSRK 119
L G +HIE ARS RK
Sbjct: 181 LQGTLLPSSDRGGMHIEYARSKMRK 205
>gi|219363207|ref|NP_001136951.1| uncharacterized protein LOC100217110 [Zea mays]
gi|194697740|gb|ACF82954.1| unknown [Zea mays]
Length = 303
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 147/299 (49%), Positives = 183/299 (61%), Gaps = 36/299 (12%)
Query: 7 DPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQ 66
DPYY+ HP P Q G+ TLFV+GLPDDV+ REIHNLF +P FD C
Sbjct: 18 DPYYVYAAHPDP------------QRQGVLTLFVAGLPDDVKPREIHNLFSHRPAFDHCL 65
Query: 67 LKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSG 126
L+YTGRGNQ VAF TF H+ A++A+ LNG FDP+SG LHIELA+S SR+ R G
Sbjct: 66 LEYTGRGNQAVAFVTFFTHEAALSAMSSLNGTIFDPESGDRLHIELAKSTSRRPRG-GVE 124
Query: 127 AYVVIDKR-TKTEANVQESSSADGDSD------------------TDEASPVRNIDSADK 167
Y VIDKR KTE N + D D D +DE S N + +DK
Sbjct: 125 GYRVIDKRANKTEGNADHENVGDEDDDEVWGEDEDGGNDNNGDGGSDEPSGTENENPSDK 184
Query: 168 GDFVTTQSER---ATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSV 224
+ T QS++ +G +++ +K + PCST+FIANLG CTEDELK+ LS
Sbjct: 185 NELPTDQSDQPGHKQQNGQSLSNEGRDKS-SSDIPPCSTIFIANLGHTCTEDELKEVLSK 243
Query: 225 YPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKMRK 283
PGF++LKMR RGGMPVAFADF ++E ++ AM LQ + L SSD G+HIEYARSKMRK
Sbjct: 244 EPGFHVLKMRRRGGMPVAFADFTDIESSTAAMNRLQGTVLASSDNDGLHIEYARSKMRK 302
>gi|115466456|ref|NP_001056827.1| Os06g0151200 [Oryza sativa Japonica Group]
gi|55296621|dbj|BAD69323.1| RNA-binding protein-like [Oryza sativa Japonica Group]
gi|55297274|dbj|BAD69059.1| RNA-binding protein-like [Oryza sativa Japonica Group]
gi|113594867|dbj|BAF18741.1| Os06g0151200 [Oryza sativa Japonica Group]
gi|215697009|dbj|BAG91003.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 300
Score = 263 bits (671), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 146/302 (48%), Positives = 185/302 (61%), Gaps = 34/302 (11%)
Query: 4 PPYDPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFD 63
PP DPYY+ HP P P Q G+ TLFV+GLPDDV+ REIHNLF +PGFD
Sbjct: 10 PPGDPYYVYAPHPYPDP----------QRQGVLTLFVAGLPDDVKPREIHNLFSSRPGFD 59
Query: 64 FCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKP 123
C L+YTGRGNQVVAF +FVNHQ A++A+ LNG FDP +G LHIELA+S+SRK+
Sbjct: 60 HCLLEYTGRGNQVVAFVSFVNHQAALSAMSALNGTVFDPDTGDRLHIELAKSSSRKRHGD 119
Query: 124 GSGAYVVIDKRTK-TEANVQESSSADGDSDTDEASP-----------------VRNIDSA 165
G G Y V+DKR K E ++ DG +D D N DS
Sbjct: 120 G-GVYRVVDKRLKRKERAADHENAGDGGNDDDAWGEDDNGGNDGDGGSDEPLDTENDDSD 178
Query: 166 DKGDFVTTQSE----RATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQT 221
+K + +S G +++ +K + PCSTLF+ANLG +CTE+ELK+
Sbjct: 179 EKNELPAERSSGQPGLKQHRGQSLSDDQPDK-LSSDIPPCSTLFVANLGHSCTEEELKEV 237
Query: 222 LSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
LS PGF++LKMR RGGMPVAFADF ++E ++ AM+ LQ + L SSD G+ IEYARSKM
Sbjct: 238 LSKQPGFHLLKMRRRGGMPVAFADFTDIESSTAAMDALQGTVLASSDADGLQIEYARSKM 297
Query: 282 RK 283
RK
Sbjct: 298 RK 299
>gi|343172667|gb|AEL99037.1| RNA recognition motif-containing protein, partial [Silene
latifolia]
Length = 226
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 138/233 (59%), Positives = 166/233 (71%), Gaps = 17/233 (7%)
Query: 61 GFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKK 120
GFD CQLK+TGRGNQVVAF TF NHQ+AV AL L+GV+FDPQ G+VLHIELARSNSR+K
Sbjct: 1 GFDSCQLKFTGRGNQVVAFVTFFNHQSAVLALQALDGVQFDPQDGTVLHIELARSNSRRK 60
Query: 121 RKPGSGAYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATD 180
RK GSG YVVIDKR K + +E SS DGD++++ + S D+ ++ + TD
Sbjct: 61 RKSGSGPYVVIDKRRKAANDAEEMSSEDGDNESNNSHQ-----SEDQDQNNSSSDDEQTD 115
Query: 181 SGNAV--APIN-----SEKPYE---GGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNM 230
+ V A +N + KP E G +QPCSTLFIANLG C E+ELKQ LS Y GF
Sbjct: 116 EKSDVKKADLNDPKDAANKPTEKTSGDLQPCSTLFIANLGSKCKEEELKQALSEYHGFKG 175
Query: 231 LKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKMRK 283
LK R +G VAFAD+EEVEQA+ AM+GLQ +TLPSSD+G M IEYARSKMRK
Sbjct: 176 LKRRVKG--TVAFADYEEVEQATNAMQGLQGTTLPSSDKGAMVIEYARSKMRK 226
>gi|343172665|gb|AEL99036.1| RNA recognition motif-containing protein, partial [Silene
latifolia]
Length = 226
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 138/233 (59%), Positives = 166/233 (71%), Gaps = 17/233 (7%)
Query: 61 GFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKK 120
GFD CQLK+TGRGNQVVAF TF NHQ+AV AL L+GV+FDPQ G+VLHIELARSNSR+K
Sbjct: 1 GFDSCQLKFTGRGNQVVAFVTFFNHQSAVLALQALDGVQFDPQDGTVLHIELARSNSRRK 60
Query: 121 RKPGSGAYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATD 180
RK GSG YVVIDKR K + +E SS DGD++++ + S D+ ++ + TD
Sbjct: 61 RKSGSGPYVVIDKRRKAANDAEEMSSEDGDNESNNSHQ-----SEDQDQNNSSGDDEQTD 115
Query: 181 SGNAV--APIN-----SEKPYE---GGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNM 230
+ V A +N + KP E +QPCSTLFIANLG C E+ELKQ LS YPGF
Sbjct: 116 EKSDVKKADLNDPKYAANKPTEKTSSDLQPCSTLFIANLGSKCKEEELKQALSEYPGFKG 175
Query: 231 LKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKMRK 283
LK R +G VAFAD+EEVEQA+ AM+GLQ +TLPSSD+G M IEYARSKMRK
Sbjct: 176 LKRRGKG--TVAFADYEEVEQATNAMQGLQGTTLPSSDKGAMVIEYARSKMRK 226
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+TLF++ L + E+ PGF LK G+G VAFA + + A A+
Sbjct: 146 CSTLFIANLGSKCKEEELKQALSEYPGFK--GLKRRGKG--TVAFADYEEVEQATNAMQG 201
Query: 95 LNGVKFDPQSGSVLHIELARSNSRK 119
L G + IE ARS RK
Sbjct: 202 LQGTTLPSSDKGAMVIEYARSKMRK 226
>gi|357125294|ref|XP_003564329.1| PREDICTED: uncharacterized protein LOC100840294 isoform 1
[Brachypodium distachyon]
Length = 302
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/301 (47%), Positives = 179/301 (59%), Gaps = 30/301 (9%)
Query: 2 AHPPY-DPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKP 60
A PP DPYY+ HP H Q G+ TLFV+GLPDDV+ REIHNLF R+P
Sbjct: 12 AAPPLGDPYYVYAPHP----------HSDPQRQGVVTLFVAGLPDDVKPREIHNLFSRRP 61
Query: 61 GFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKK 120
GFD C L+YTGRGNQV AF +F HQ A++ + LNG FDP++G LHIELA+SNSR++
Sbjct: 62 GFDQCLLEYTGRGNQVCAFVSFFTHQAALSTMLALNGTVFDPENGDCLHIELAKSNSRRR 121
Query: 121 RKPGSGAYVVIDKRT-KTEANVQESSSADGD-------------SDTDEASPVRNIDSAD 166
G Y VIDKR + E N D D +DE S N +S+D
Sbjct: 122 HGGGGDVYRVIDKRVNRREVNADNEHIGDDDVSGEDEGEGKYGEGGSDEPSDTENDNSSD 181
Query: 167 KGDFVTTQ--SERATDSGNAVAPINSEKPYEGGVQ--PCSTLFIANLGPNCTEDELKQTL 222
K + Q E +P N ++P + V PCSTLFI NLG CTE+EL++
Sbjct: 182 KNELPADQRFGEPGIKQKKRQSPSN-DQPDKSSVDIPPCSTLFIENLGQTCTEEELEEVF 240
Query: 223 SVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKMR 282
S PGF++LKMR RGGMP AFADF ++E ++ AM LQ + L SSD G+ IEYARSKMR
Sbjct: 241 SKQPGFHVLKMRRRGGMPAAFADFTDIESSTAAMNNLQGTILSSSDSDGLRIEYARSKMR 300
Query: 283 K 283
K
Sbjct: 301 K 301
>gi|222634965|gb|EEE65097.1| hypothetical protein OsJ_20145 [Oryza sativa Japonica Group]
Length = 315
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 148/317 (46%), Positives = 187/317 (58%), Gaps = 49/317 (15%)
Query: 4 PPYDPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFD 63
PP DPYY+ HP P P Q G+ TLFV+GLPDDV+ REIHNLF +PGFD
Sbjct: 10 PPGDPYYVYAPHPYPDP----------QRQGVLTLFVAGLPDDVKPREIHNLFSSRPGFD 59
Query: 64 FCQLKYTGRGNQVVAFATFVNHQTAVAALHELN----GVK-----------FDPQSGSVL 108
C L+YTGRGNQVVAF +FVNHQ A++A+ LN GVK FDP +G L
Sbjct: 60 HCLLEYTGRGNQVVAFVSFVNHQAALSAMSALNYVIPGVKYPDHREYSGTVFDPDTGDRL 119
Query: 109 HIELARSNSRKKRKPGSGAYVVIDKRTK-TEANVQESSSADGDSDTDEASP--------- 158
HIELA+S+SRK+ G G Y V+DKR K E ++ DG +D D
Sbjct: 120 HIELAKSSSRKRHGDG-GVYRVVDKRLKRKERAADHENAGDGGNDDDAWGEDDNGGNDGD 178
Query: 159 --------VRNIDSADKGDFVTTQSE----RATDSGNAVAPINSEKPYEGGVQPCSTLFI 206
N DS +K + +S G +++ +K + PCSTLF+
Sbjct: 179 GGSDEPLDTENDDSDEKNELPAERSSGQPGLKQHRGQSLSDDQPDK-LSSDIPPCSTLFV 237
Query: 207 ANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPS 266
ANLG +CTE+ELK+ LS PGF++LKMR RGGMPVAFADF ++E ++ AM+ LQ + L S
Sbjct: 238 ANLGHSCTEEELKEVLSKQPGFHLLKMRRRGGMPVAFADFTDIESSTAAMDALQGTVLAS 297
Query: 267 SDRGGMHIEYARSKMRK 283
SD G+ IEYARSKMRK
Sbjct: 298 SDADGLQIEYARSKMRK 314
>gi|242094708|ref|XP_002437844.1| hypothetical protein SORBIDRAFT_10g003600 [Sorghum bicolor]
gi|241916067|gb|EER89211.1| hypothetical protein SORBIDRAFT_10g003600 [Sorghum bicolor]
Length = 826
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 140/299 (46%), Positives = 182/299 (60%), Gaps = 35/299 (11%)
Query: 7 DPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQ 66
DPYY+ HP P Q G+ TLFV+GLPDDV+ REIHNLF +P FD C
Sbjct: 16 DPYYVYAPHPDP------------QRQGVLTLFVAGLPDDVKPREIHNLFSHRPAFDHCL 63
Query: 67 LKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSG 126
L+YTGR NQVVAF TF H+ A++A+ LNG FDP++G LHIELA+S SR+ R G
Sbjct: 64 LEYTGRANQVVAFVTFFTHEAALSAMTSLNGTIFDPETGYRLHIELAKSTSRRPRGGGE- 122
Query: 127 AYVVIDKRT-KTEANVQE-----------------SSSADGDSDTDEASPVRNIDSADKG 168
Y VIDKRT KTE N E ++ +GD ++DE S N +S+DK
Sbjct: 123 VYRVIDKRTNKTEGNADENVGDEVDEEVWGGDEDGANDDNGDGESDEPSGTENENSSDKN 182
Query: 169 DFVTTQSER---ATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVY 225
+ QS++ +G +++ +K + PCSTLFIANLG CT+DEL + LS
Sbjct: 183 ELPADQSDQPRHKKQNGKSLSNDGRDKS-SNDIPPCSTLFIANLGDTCTKDELNEVLSKE 241
Query: 226 PGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKMRKL 284
PGF++LKMR RGGMPVAFADF ++E ++ AM LQ + L SSD G+HIE S +R +
Sbjct: 242 PGFDVLKMRRRGGMPVAFADFTDIESSTAAMNSLQGTVLASSDSDGLHIESELSTLRTM 300
>gi|218197597|gb|EEC80024.1| hypothetical protein OsI_21699 [Oryza sativa Indica Group]
Length = 315
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 146/317 (46%), Positives = 185/317 (58%), Gaps = 49/317 (15%)
Query: 4 PPYDPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFD 63
PP DPYY+ HP P Q G+ TLFV+GLPDDV+ REIH LF +PGFD
Sbjct: 10 PPGDPYYVYAPHPYP----------DTQRQGVLTLFVAGLPDDVKPREIHKLFSSRPGFD 59
Query: 64 FCQLKYTGRGNQVVAFATFVNHQTAVAALHELN----GVK-----------FDPQSGSVL 108
C L+YTGRGNQVVAF +FVNHQ A++A+ LN GVK FDP +G L
Sbjct: 60 HCLLEYTGRGNQVVAFVSFVNHQAALSAMSALNYVIPGVKYPDHREYSGTVFDPDTGDRL 119
Query: 109 HIELARSNSRKKRKPGSGAYVVIDKRTK-TEANVQESSSADGDSDTDEASP--------- 158
HIELA+S+SRK+ G G Y V+DKR K E ++ DG +D D
Sbjct: 120 HIELAKSSSRKRHGDG-GVYRVVDKRLKRKERAADHENAGDGGNDDDAWGEDDNGGNDGD 178
Query: 159 --------VRNIDSADKGDFVTTQSE----RATDSGNAVAPINSEKPYEGGVQPCSTLFI 206
N DS +K + +S G +++ +K + PCSTLF+
Sbjct: 179 GGSDEPLDTENDDSDEKNELPAERSSGQPGLKQHRGQSLSDDQPDK-LSSDIPPCSTLFV 237
Query: 207 ANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPS 266
ANLG +CTE+ELK+ LS PGF++LKMR RGGMPVAFADF ++E ++ AM+ LQ + L S
Sbjct: 238 ANLGHSCTEEELKEVLSKQPGFHLLKMRRRGGMPVAFADFTDIESSTAAMDALQGTVLAS 297
Query: 267 SDRGGMHIEYARSKMRK 283
SD G+ IEYARSKMRK
Sbjct: 298 SDADGLQIEYARSKMRK 314
>gi|9294016|dbj|BAB01919.1| unnamed protein product [Arabidopsis thaliana]
Length = 271
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 157/217 (72%), Gaps = 6/217 (2%)
Query: 62 FDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
F ++ Y QVVAFATF +H+ A+AA++ELNGVKFDPQ+GS LHIELARSNSR+K
Sbjct: 42 FKLSEVTYL----QVVAFATFTSHRFALAAMNELNGVKFDPQTGSNLHIELARSNSRRKE 97
Query: 122 KPGSGAYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDS 181
+PGSG YVVID R K + Q+ S +GDSD DE N DS + D ++++ DS
Sbjct: 98 RPGSGPYVVIDNRNKEISKSQDDQSDEGDSDPDEVQEPGNSDSPKENDTTKSEADSEPDS 157
Query: 182 GNAVAPINSEKPYEGG--VQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM 239
A + EK EGG + CSTLFIANLGPNCTEDELKQ LS YPGF++LK+RARGGM
Sbjct: 158 KAPSANGHLEKASEGGSGARACSTLFIANLGPNCTEDELKQLLSRYPGFHILKIRARGGM 217
Query: 240 PVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEY 276
PVAFADFEE+EQA+ AM LQ + L SSDRGGMHI+Y
Sbjct: 218 PVAFADFEEIEQATDAMNHLQGNLLSSSDRGGMHIDY 254
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
+TLF++ L + E+ L R PGF LK RG VAFA F + A A++ L
Sbjct: 180 STLFIANLGPNCTEDELKQLLSRYPGFHI--LKIRARGGMPVAFADFEEIEQATDAMNHL 237
Query: 96 NGVKFDPQSGSVLHIE 111
G +HI+
Sbjct: 238 QGNLLSSSDRGGMHID 253
>gi|357125296|ref|XP_003564330.1| PREDICTED: uncharacterized protein LOC100840294 isoform 2
[Brachypodium distachyon]
Length = 261
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 135/286 (47%), Positives = 170/286 (59%), Gaps = 41/286 (14%)
Query: 2 AHPPY-DPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKP 60
A PP DPYY+ HP H Q G+ TLFV+GLPDDV+ REIHNLF R+P
Sbjct: 12 AAPPLGDPYYVYAPHP----------HSDPQRQGVVTLFVAGLPDDVKPREIHNLFSRRP 61
Query: 61 GFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKK 120
GFD C L+YTGRGNQV AF +F HQ A++ + LNG FDP++G LHIELA+SNSR++
Sbjct: 62 GFDQCLLEYTGRGNQVCAFVSFFTHQAALSTMLALNGTVFDPENGDCLHIELAKSNSRRR 121
Query: 121 RKPGSGAYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQS-ERAT 179
G+ +DE S N +S+DK + QS E
Sbjct: 122 HG--------------------------GEGGSDEPSDTENDNSSDKNELPADQSGEPGI 155
Query: 180 DSGNAVAPINSEKPYEGGVQ--PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARG 237
+P N ++P + V PCSTLFI NLG CTE+EL++ S PGF++LKMR RG
Sbjct: 156 KQKKRQSPSN-DQPDKSSVDIPPCSTLFIENLGQTCTEEELEEVFSKQPGFHVLKMRRRG 214
Query: 238 GMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKMRK 283
GMP AFADF ++E ++ AM LQ + L SSD G+ IEYARSKMRK
Sbjct: 215 GMPAAFADFTDIESSTAAMNNLQGTILSSSDSDGLRIEYARSKMRK 260
>gi|255637677|gb|ACU19162.1| unknown [Glycine max]
Length = 189
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 128/188 (68%), Positives = 143/188 (76%), Gaps = 22/188 (11%)
Query: 1 MAHPPYDPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKP 60
MA PP+DP+YL Y H +Q N INTLFVSGLPDDV+AREIHNLFRR+P
Sbjct: 1 MAQPPFDPFYL--------------YQHDEQSN-INTLFVSGLPDDVKAREIHNLFRRRP 45
Query: 61 GFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKK 120
GFD CQLKYTGR NQVVAFATF NHQ+A+AALH LNGVKFDPQ+GSVLHIELARSNSR+K
Sbjct: 46 GFDSCQLKYTGRANQVVAFATFFNHQSAMAALHALNGVKFDPQTGSVLHIELARSNSRRK 105
Query: 121 RKPGSGAYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSAD-KGDF-VTTQSERA 178
RKPGSGAYVVIDKR+K E ++Q SSS DGDSD DE S DS D +GD + T E A
Sbjct: 106 RKPGSGAYVVIDKRSKGEPDLQGSSSEDGDSDPDEPS-----DSGDNQGDLAIMTSDETA 160
Query: 179 TDSGNAVA 186
S NAV+
Sbjct: 161 VGSDNAVS 168
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Query: 201 CSTLFIANLGPNCTEDELKQTLSVYPGFN--MLKMRARGGMPVAFADFEEVEQASIAMEG 258
+TLF++ L + E+ PGF+ LK R VAFA F + A A+
Sbjct: 20 INTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQVVAFATFFNHQSAMAALHA 79
Query: 259 LQDSTLPSSDRGGMHIEYARSKMRK 283
L +HIE ARS R+
Sbjct: 80 LNGVKFDPQTGSVLHIELARSNSRR 104
>gi|148909446|gb|ABR17821.1| unknown [Picea sitchensis]
Length = 302
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 135/286 (47%), Positives = 181/286 (63%), Gaps = 22/286 (7%)
Query: 11 LPPIHPPPPPVPP----------PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKP 60
+ P+ PP P P +H+ + TLF+SGLP+D++ REI+NLFRR+P
Sbjct: 1 MAPVAPPLAPHSPLQNNNKKQTHSRHHNNNHKERVRTLFISGLPEDIKHREIYNLFRRRP 60
Query: 61 GFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKK 120
GF+ CQLKYTGRG Q+VAFA F +HQ A+AA LNG+ FDP++G+ L+IELAR+NSR K
Sbjct: 61 GFEACQLKYTGRGYQIVAFAVFSHHQLALAAKDVLNGLTFDPETGATLNIELARTNSRIK 120
Query: 121 RK----PGSGAYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSE 176
R G+G Y DKR + V DG +T + NI G V
Sbjct: 121 RSGTDDGGNGPY---DKRIRGPFGVPGVFDDDGVGETVKMPGSSNI--VQSGGVVG--GS 173
Query: 177 RATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR 236
A + GN+ P + P GG PC TLF+ANLGP CTE EL++ LS + GF MLK++ +
Sbjct: 174 LAGEDGNS-GPTKEQAPGPGGNPPCPTLFVANLGPTCTEGELREVLSRFQGFKMLKLQTK 232
Query: 237 GGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKMR 282
GGMPVAF DFE+V ++ A++ LQD+ LPSSDRGG+H+EYA+S+M+
Sbjct: 233 GGMPVAFVDFEDVTSSAEALKQLQDTLLPSSDRGGLHLEYAKSRMK 278
>gi|326506974|dbj|BAJ95564.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 259
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/277 (47%), Positives = 167/277 (60%), Gaps = 37/277 (13%)
Query: 7 DPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQ 66
DPYY ++ P P P P G+ TLFV+GLPDDV+ REIHNLF R+PGFD C
Sbjct: 19 DPYY--HLYAPQPLQHPDPRQ------GVVTLFVAGLPDDVKPREIHNLFSRRPGFDHCL 70
Query: 67 LKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSG 126
L+YTGRGNQ VAF +F H A++A+ LNG FDP +G LHIELA+SNSR KR G G
Sbjct: 71 LEYTGRGNQAVAFVSFFTHHAALSAMASLNGSVFDPDNGDCLHIELAKSNSR-KRHGGQG 129
Query: 127 AYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVA 186
+DG SD + N +S+DK + +T QS + G
Sbjct: 130 G-------------------SDGPSDEE------NDNSSDKNELLTDQS---GEPGTKQQ 161
Query: 187 PINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADF 246
S + PCSTLF++NLG CTE EL++ LS PGF++LKMR RGG+P AFADF
Sbjct: 162 KGRSSNDQPDKIPPCSTLFLSNLGQTCTEKELEELLSKQPGFHVLKMRRRGGLPAAFADF 221
Query: 247 EEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKMRK 283
++E ++ AME + + L SSD G+ IEYARSKMRK
Sbjct: 222 TDIESSTAAMENFKGTMLSSSDSDGLQIEYARSKMRK 258
>gi|116791286|gb|ABK25922.1| unknown [Picea sitchensis]
Length = 345
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/263 (41%), Positives = 157/263 (59%), Gaps = 20/263 (7%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLF++GLPDDV+ REI+NLFR PG+ CQL+ + G QV AF F + Q+A+AA+H
Sbjct: 82 VRTLFIAGLPDDVKHREIYNLFREFPGYRSCQLRNSEGGTQVYAFTVFTDQQSALAAMHA 141
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR-KPGSGAYVVIDKRTKTEANVQESSSADGDSDT 153
LNG+ FDP++ +VL+I+LA+SNSR KR + G DKR + +V G T
Sbjct: 142 LNGMDFDPETRAVLYIDLAKSNSRSKRSRTDDGGSNSSDKRIRGPNSVPGVYPDAGVGGT 201
Query: 154 DEASPVRNIDSADKGDFVTTQSERATD------------SGNAVAPIN-SEKPYEGGVQP 200
+ N +D F +TQS + +G + AP + P P
Sbjct: 202 VHMPGMANSGYSDTSGFPSTQSGGMMEASIFQDGVPGLTTGQSTAPTQPASNP------P 255
Query: 201 CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQ 260
C TLF+ANLGP C+E+EL Q S PGF LKM+ G +PVAF DF+E+ ++ A+ LQ
Sbjct: 256 CPTLFVANLGPTCSEEELTQVFSRCPGFLKLKMQIIGELPVAFVDFQEITSSTQALNHLQ 315
Query: 261 DSTLPSSDRGGMHIEYARSKMRK 283
++ L SSDRGGM ++YA+++M +
Sbjct: 316 NAMLLSSDRGGMRLQYAKARMGR 338
>gi|307136276|gb|ADN34103.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 113
Score = 183 bits (464), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 92/123 (74%), Positives = 98/123 (79%), Gaps = 10/123 (8%)
Query: 1 MAHPPYDPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKP 60
MAH PYDPYYL P P Y + INTLF+SGLPDDV+AREIHNLFRR+P
Sbjct: 1 MAHHPYDPYYLYN-------QPDPTY---SDRSNINTLFISGLPDDVKAREIHNLFRRRP 50
Query: 61 GFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKK 120
GFD CQLKYTGRGNQVVAFATF NHQ+AV ALH LNGVKFDPQSGSVLHIELARSNSR+K
Sbjct: 51 GFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSRRK 110
Query: 121 RKP 123
KP
Sbjct: 111 HKP 113
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFN--MLKMRARGGMPVAFADFEEVEQASIAMEGL 259
+TLFI+ L + E+ PGF+ LK RG VAFA F + A A+ L
Sbjct: 26 NTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHAL 85
Query: 260 QDSTLPSSDRGGMHIEYARSKMRK 283
+HIE ARS R+
Sbjct: 86 NGVKFDPQSGSVLHIELARSNSRR 109
>gi|357482791|ref|XP_003611682.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355513017|gb|AES94640.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 340
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/265 (40%), Positives = 155/265 (58%), Gaps = 26/265 (9%)
Query: 33 NGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAAL 92
N + TLF++GLP+DV+ REI+NLFR PG++ L+ +Q AFA F N Q+A+ AL
Sbjct: 79 NDVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPNNSSQAFAFAVFSNQQSAIMAL 138
Query: 93 HELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSD 152
H LNG+ FD + GS L+I+LA+SNSR KR + D R ++ + S+S+ D
Sbjct: 139 HALNGMIFDLEKGSTLYIDLAKSNSRAKRA------RIDDDRASSDKKARGSASSWPTPD 192
Query: 153 TDEAS--------PVRNIDSADKGDFVTTQSERATDSGNAVAP---INSEK---PY-EGG 197
+ +S P N + + QS D GNA+ +N +K PY
Sbjct: 193 SGVSSIHMPGMGNPAFNTNMI---GYPPAQSHGIAD-GNAMHDGLFLNLKKCSNPYIPTN 248
Query: 198 VQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAME 257
PC+TLF+ANLGP+C E EL Q S +PGF LKM++ G PV+F DF+++ A++A+
Sbjct: 249 TTPCATLFVANLGPSCNEQELIQVFSRFPGFLKLKMQSTYGAPVSFVDFKDIPSATVALN 308
Query: 258 GLQDSTLPSSDRG-GMHIEYARSKM 281
LQ + L SS G GM +EYA+S+M
Sbjct: 309 SLQGTILYSSPAGEGMRLEYAKSRM 333
>gi|225438787|ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247532 [Vitis vinifera]
Length = 336
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 109/265 (41%), Positives = 152/265 (57%), Gaps = 11/265 (4%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q + + TLF++GLP+DV+ REI+NLFR PG++ L+ + +Q AFA F+
Sbjct: 69 PPLYPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQNSQPFAFAVFL 128
Query: 84 NHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQE 143
+ Q+A+AA+H LNG+ FD + GS L+I+LA+SNSR KR +DK+ K A
Sbjct: 129 DQQSAIAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRADDERPGLDKKVKGSAGF-- 186
Query: 144 SSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPI-----NSEKPY-EGG 197
S D + + N + G + +TQS D G A+ NS PY
Sbjct: 187 SRPPDSGVGSVHMPGMGNSAYSMIG-YPSTQSHGNFD-GRALNETPAKLNNSSAPYFPQN 244
Query: 198 VQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAME 257
PC TLF+ANLGP C+E EL S PGF LKM++ G PVAF DF++ ++ A+
Sbjct: 245 ATPCPTLFVANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQDTPCSTGALN 304
Query: 258 GLQDSTLPSSDRG-GMHIEYARSKM 281
LQ + L SS G GM IEYA+S+M
Sbjct: 305 HLQGTVLYSSPAGEGMRIEYAKSRM 329
>gi|296082378|emb|CBI21383.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 109/265 (41%), Positives = 152/265 (57%), Gaps = 11/265 (4%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q + + TLF++GLP+DV+ REI+NLFR PG++ L+ + +Q AFA F+
Sbjct: 66 PPLYPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQNSQPFAFAVFL 125
Query: 84 NHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQE 143
+ Q+A+AA+H LNG+ FD + GS L+I+LA+SNSR KR +DK+ K A
Sbjct: 126 DQQSAIAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRADDERPGLDKKVKGSAGF-- 183
Query: 144 SSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPI-----NSEKPY-EGG 197
S D + + N + G + +TQS D G A+ NS PY
Sbjct: 184 SRPPDSGVGSVHMPGMGNSAYSMIG-YPSTQSHGNFD-GRALNETPAKLNNSSAPYFPQN 241
Query: 198 VQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAME 257
PC TLF+ANLGP C+E EL S PGF LKM++ G PVAF DF++ ++ A+
Sbjct: 242 ATPCPTLFVANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQDTPCSTGALN 301
Query: 258 GLQDSTLPSSDRG-GMHIEYARSKM 281
LQ + L SS G GM IEYA+S+M
Sbjct: 302 HLQGTVLYSSPAGEGMRIEYAKSRM 326
>gi|255587763|ref|XP_002534389.1| RNA binding protein, putative [Ricinus communis]
gi|223525395|gb|EEF27997.1| RNA binding protein, putative [Ricinus communis]
Length = 318
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 143/257 (55%), Gaps = 10/257 (3%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PPY + + TLFV+GLP+DV REI+NLFR PG++ L+ + +Q AFATF
Sbjct: 63 PPYVPYAGHDLVRTLFVAGLPEDVMPREIYNLFREFPGYESSHLRTPTQTSQPFAFATFA 122
Query: 84 NHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQE 143
+ +AVAA+H LNG+ FD + GS L+I+LA+SNSR KR + + +DK+ K + +
Sbjct: 123 DQPSAVAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRTADEWPGLDKKAKASPAIPQ 182
Query: 144 SSSADGDSDT---DEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQP 200
S+ G + N+ T RA ++ NS P P
Sbjct: 183 SNFDSGFGSVHLPGMGNSAYNMIGYPPAQSHGTFDSRAKTETKSINSNNSSAP------P 236
Query: 201 CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQ 260
C TLF+ANLGPNCTE EL Q S + GF LKM++ G PVAF DF++ ++ A+ LQ
Sbjct: 237 CPTLFVANLGPNCTEQELTQLFSRFAGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQ 296
Query: 261 DSTLPSSDRG-GMHIEY 276
+ L SS G GM +EY
Sbjct: 297 GTVLYSSTSGEGMRLEY 313
>gi|224094288|ref|XP_002310126.1| predicted protein [Populus trichocarpa]
gi|222853029|gb|EEE90576.1| predicted protein [Populus trichocarpa]
Length = 323
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/253 (39%), Positives = 146/253 (57%), Gaps = 14/253 (5%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFV+GLPDD++ RE++NLFR PG++ L+ + +Q AFATF + +AVAA+H
Sbjct: 72 VRTLFVAGLPDDIKPREMYNLFREFPGYESSHLRTPSQNSQPFAFATFTDQPSAVAAMHA 131
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTD 154
LNG+ FD + GS L+I+LA+SNSR KR + +DK+ + + + G
Sbjct: 132 LNGMVFDLEKGSTLYIDLAKSNSRSKRSRTDDEWSSLDKKARVSSGFSMGTPDSGFGSVH 191
Query: 155 EASPVRNIDSADKGDFVTTQS-----ERATDSGNAVAPINSEKPYEGGVQPCSTLFIANL 209
P + + F + QS +R+ + A NS P PC TLF+ANL
Sbjct: 192 L--PGMANSAFNTIGFPSAQSPGSIDDRSRNESKAGRMNNSSAP------PCPTLFVANL 243
Query: 210 GPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDR 269
G NCTE+EL Q S PGF LKM++ G PVAF DF++ ++ A+ LQ + L SS
Sbjct: 244 GQNCTEEELIQVFSRCPGFLKLKMQSTYGAPVAFVDFQDTASSTGALNHLQGTVLYSSVA 303
Query: 270 G-GMHIEYARSKM 281
G G+ +EYA+S+M
Sbjct: 304 GEGLRLEYAKSRM 316
>gi|356541768|ref|XP_003539345.1| PREDICTED: uncharacterized protein LOC100780983 [Glycine max]
Length = 338
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 153/286 (53%), Gaps = 36/286 (12%)
Query: 24 PPY--HHQQQ------------DNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKY 69
PPY HQQQ + + TLFV+GLP+DV+ REI+NLFR PG++ L+
Sbjct: 53 PPYVAQHQQQAVFGSYGAPQSSTHEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRS 112
Query: 70 TGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYV 129
+Q AFA F + ++A+ A+H LNG+ FD + GS L+I+LA+SNSR KR V
Sbjct: 113 PSNSSQPFAFAVFASQKSAILAMHALNGLVFDLEKGSTLYIDLAKSNSRSKRTRIDDERV 172
Query: 130 VIDKRTK-TEANVQESSSADG------------DSDTDEASPVRNIDSADKGDFVTTQSE 176
DK+ + + S G +++T +++ +AD +
Sbjct: 173 GADKKARGLTPSWSTPDSGVGSIHMPGMGNPAFNTNTFGYPSAQSLGNADGSAMSDSLFA 232
Query: 177 RATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR 236
S P NS PC+TLF+ANLGP+C E EL Q S YPGF LKM++
Sbjct: 233 NLKKSSTPYIPQNST--------PCATLFVANLGPSCNEQELIQVFSRYPGFLKLKMQST 284
Query: 237 GGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRG-GMHIEYARSKM 281
G PVAF DF++V ++ A+ LQ + L SS G GM +EYA+S+M
Sbjct: 285 YGAPVAFVDFQDVGSSTDALNSLQGTILHSSQSGEGMRLEYAKSRM 330
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELN 96
TLFV+ L +E+ +F R PGF +LK VAF F + ++ AL+ L
Sbjct: 251 TLFVANLGPSCNEQELIQVFSRYPGF--LKLKMQSTYGAPVAFVDFQDVGSSTDALNSLQ 308
Query: 97 G-VKFDPQSGSVLHIELARSNSRKKRKP 123
G + QSG + +E A+S +RKP
Sbjct: 309 GTILHSSQSGEGMRLEYAKSRMGMRRKP 336
>gi|356495478|ref|XP_003516604.1| PREDICTED: uncharacterized protein LOC100799471 [Glycine max]
Length = 332
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/262 (39%), Positives = 147/262 (56%), Gaps = 12/262 (4%)
Query: 29 QQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTA 88
Q + + TLFV+GLP+DV+ REI+NLFR P ++ L+ +Q AFA F + Q+A
Sbjct: 66 QSSTHEVRTLFVAGLPEDVKPREIYNLFREFPDYESSHLRSPSNSSQPFAFAVFASQQSA 125
Query: 89 VAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTK--TEANVQESSS 146
+ A H LNG+ FD + GS+L+I+LA+SNSR KR DK+ + T + S
Sbjct: 126 IMAKHALNGLVFDLEKGSILYIDLAKSNSRSKRTRIDDERAGADKKARGLTPSWATPDSG 185
Query: 147 ADGDSDTDEASPVRNIDSADKGDFVTTQS----ERATDSGNAVAPI-NSEKPYE-GGVQP 200
+P N + + + QS + +T SG A + S PY P
Sbjct: 186 VGSIHMPGMGNPAFN---TNMFGYPSAQSLGNADGSTMSGGLFANLKKSSTPYVPQNSTP 242
Query: 201 CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQ 260
C+TLF+ANLG +C E EL Q S YPGF LKM++ G PVAF DF++V ++ A+ LQ
Sbjct: 243 CATLFVANLGSSCNEQELIQVFSRYPGFLKLKMQSTYGAPVAFVDFQDVGSSTDALNSLQ 302
Query: 261 DSTLPSSDRG-GMHIEYARSKM 281
+ L SS G GM +EYA+S+M
Sbjct: 303 GTILHSSQSGEGMRVEYAKSRM 324
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELN 96
TLFV+ L +E+ +F R PGF +LK VAF F + ++ AL+ L
Sbjct: 245 TLFVANLGSSCNEQELIQVFSRYPGF--LKLKMQSTYGAPVAFVDFQDVGSSTDALNSLQ 302
Query: 97 G-VKFDPQSGSVLHIELARSNSRKKRKP 123
G + QSG + +E A+S ++KP
Sbjct: 303 GTILHSSQSGEGMRVEYAKSRMGMRKKP 330
>gi|413942879|gb|AFW75528.1| hypothetical protein ZEAMMB73_795624, partial [Zea mays]
Length = 210
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 125/211 (59%), Gaps = 24/211 (11%)
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKR-TKTEANVQESSSADGDSD- 152
G FDP+SG LHIELA+S SR+ R G Y VIDKR KTE N + D D D
Sbjct: 1 FQGTIFDPESGDRLHIELAKSTSRRPRG-GVEGYRVIDKRANKTEGNADHENVGDEDDDE 59
Query: 153 -----------------TDEASPVRNIDSADKGDFVTTQSER---ATDSGNAVAPINSEK 192
+DE S N + +DK + T QS++ +G +++ +K
Sbjct: 60 VWGEDEDGGNDNNGDGGSDEPSGTENENPSDKNELPTDQSDQPGHKQQNGQSLSNEGRDK 119
Query: 193 PYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQA 252
+ PCST+FIANLG CTEDELK+ LS PGF++LKMR RGGMPVAFADF ++E +
Sbjct: 120 SS-SDIPPCSTIFIANLGHTCTEDELKEVLSKEPGFHVLKMRRRGGMPVAFADFTDIESS 178
Query: 253 SIAMEGLQDSTLPSSDRGGMHIEYARSKMRK 283
+ AM LQ + L SSD G+HIEYARSKMRK
Sbjct: 179 TAAMNRLQGTVLASSDNDGLHIEYARSKMRK 209
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+T+F++ L E+ + ++PGF LK RG VAFA F + +++ AA++
Sbjct: 127 CSTIFIANLGHTCTEDELKEVLSKEPGFHV--LKMRRRGGMPVAFADFTDIESSTAAMNR 184
Query: 95 LNGVKFDPQSGSVLHIELARSNSRK 119
L G LHIE ARS RK
Sbjct: 185 LQGTVLASSDNDGLHIEYARSKMRK 209
>gi|317106697|dbj|BAJ53198.1| JHL03K20.7 [Jatropha curcas]
Length = 316
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 142/246 (57%), Gaps = 10/246 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFV+GLPDDV+ REI+NLFR PG++ L+ + +Q AFATF++ +AVAA+H
Sbjct: 75 VRTLFVAGLPDDVKPREIYNLFREFPGYESSHLRSPTQTSQPFAFATFIDQPSAVAAMHA 134
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTD 154
LNG+ FD + GS L+I+LA+SNSR KR + +DKR K ++ G D+
Sbjct: 135 LNGMVFDLEKGSTLYIDLAKSNSRSKRSRSDDEWSGLDKRVKASP-----ATPGGSLDSG 189
Query: 155 EAS---PVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGP 211
S P + + + + + QS DS A P + PC TLF+ANLGP
Sbjct: 190 FGSVHLPGMSNSAYNMIGYTSPQSHGIFDSRAASEPTGANSS-NSSAPPCPTLFVANLGP 248
Query: 212 NCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRG- 270
NC E EL Q S PGF LKM++ G PVAF DF++ ++ A+ LQ + L SS G
Sbjct: 249 NCMEQELIQVFSRCPGFLKLKMQSTYGAPVAFVDFQDTSCSTGALNHLQGTILYSSPAGD 308
Query: 271 GMHIEY 276
GM +EY
Sbjct: 309 GMRLEY 314
>gi|147802946|emb|CAN64038.1| hypothetical protein VITISV_021557 [Vitis vinifera]
Length = 335
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/259 (38%), Positives = 142/259 (54%), Gaps = 11/259 (4%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q + + TLF++GLP+DV+ REI+NLFR PG++ L+ + +Q AFA F+
Sbjct: 66 PPLYPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQNSQPFAFAVFL 125
Query: 84 NHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQE 143
+ Q+A+A +H LNG+ FD + GS L+I+LA+SNSR KR +DK+ K A
Sbjct: 126 DQQSAIATMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRADDERPGLDKKVKGSAGF-- 183
Query: 144 SSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPI-----NSEKPY-EGG 197
S D + + N + G + +TQS D G A+ NS PY
Sbjct: 184 SRPPDSGVGSVHMPGMGNSAYSMIG-YPSTQSHGNFD-GRALNETPAKLNNSSAPYFPQN 241
Query: 198 VQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEE-VEQASIAM 256
V PC TLF+ANLGP C+E EL S PGF LKM++ G PVAF DF++ + A
Sbjct: 242 VTPCPTLFVANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQQYLAHKKWAP 301
Query: 257 EGLQDSTLPSSDRGGMHIE 275
GL S L + G+ ++
Sbjct: 302 LGLGISALGAGVWAGLDLQ 320
>gi|297824185|ref|XP_002879975.1| hypothetical protein ARALYDRAFT_903572 [Arabidopsis lyrata subsp.
lyrata]
gi|297325814|gb|EFH56234.1| hypothetical protein ARALYDRAFT_903572 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 150/289 (51%), Gaps = 27/289 (9%)
Query: 9 YYLPPIHPPPPP-VPPPPYHHQQQ-----------DNGINTLFVSGLPDDVRAREIHNLF 56
Y LP I PPP P V P P + + TLFV+GLP+DV+ REI+NLF
Sbjct: 9 YNLPAIVPPPQPGVAPIPITSAHSVFLPTHVSIGARDEVRTLFVAGLPEDVKPREIYNLF 68
Query: 57 RRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSN 116
R PG++ L+ + G + AFA F + Q+AV +H LNG+ FD + S LHI+LA+SN
Sbjct: 69 REFPGYETSHLR-SSDGAKPFAFAVFSDLQSAVTVMHALNGMVFDLEKYSTLHIDLAKSN 127
Query: 117 SRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNID-SADKGDFVTTQS 175
+ KR + + K+ K + ES + +S I S + + +
Sbjct: 128 PKSKRSRTDDGWESL-KKPKPWSTTTESGFGSFHTPGMSSSTYNTIGYSPAQSQGIANVA 186
Query: 176 ERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRA 235
RA +GN+ PC TLFIAN+GPNCTE EL Q S GF LK++
Sbjct: 187 GRAPTTGNS----------SKAADPCPTLFIANMGPNCTEAELIQVFSRCRGFLKLKIQG 236
Query: 236 RGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRG-GMHIEYARSKMRK 283
G PVAF DF++V +S A+ LQ + L SS G G+ ++ +R MRK
Sbjct: 237 TYGTPVAFVDFQDVSCSSEALHTLQGTVLYSSLTGEGLRLQ-SRMGMRK 284
>gi|145361708|ref|NP_850366.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|62321263|dbj|BAD94469.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|110739960|dbj|BAF01884.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330254999|gb|AEC10093.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 292
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 140/248 (56%), Gaps = 12/248 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFV+GLP+DV+ REI+NLFR PG++ L+ + G + AFA F + Q+AVA +H
Sbjct: 49 VRTLFVAGLPEDVKPREIYNLFREFPGYETSHLR-SSDGAKPFAFAVFSDLQSAVAVMHA 107
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTD 154
LNG+ FD + S LHI+LA+SN + KR + + K+ K+ ES +
Sbjct: 108 LNGMVFDLEKHSTLHIDLAKSNPKSKRSRTDDGWESL-KKLKSWNTTTESGFGSFQTPGM 166
Query: 155 EASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCT 214
+S I + QS+ + AP S KP + PC TLFIAN+GPNCT
Sbjct: 167 SSSAYNTIG------YSPAQSQGIANVAGR-AP-TSRKPSKAA-DPCPTLFIANMGPNCT 217
Query: 215 EDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGG-MH 273
E EL Q S GF LK++ G PVAF DF++V +S A+ LQ + L SS G +
Sbjct: 218 EAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSEALHTLQGTVLYSSLTGEVLR 277
Query: 274 IEYARSKM 281
++YARS+M
Sbjct: 278 LQYARSRM 285
>gi|28207150|gb|AAO37215.1| hypothetical protein [Arabidopsis thaliana]
Length = 277
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 140/248 (56%), Gaps = 12/248 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFV+GLP+DV+ REI+NLFR PG++ L+ + G + AFA F + Q+AVA +H
Sbjct: 34 VRTLFVAGLPEDVKPREIYNLFREFPGYETSHLR-SSDGAKPFAFAVFSDLQSAVAVMHA 92
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTD 154
LNG+ FD + S LHI+LA+SN + KR + + K+ K+ ES +
Sbjct: 93 LNGMVFDLEKHSTLHIDLAKSNPKSKRSRTDDGWESL-KKLKSWNTTTESGFGSFQTPGM 151
Query: 155 EASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCT 214
+S I + QS+ + AP S KP + PC TLFIAN+GPNCT
Sbjct: 152 SSSAYNTIG------YSPAQSQGIANVAGR-AP-TSRKPSKAA-DPCPTLFIANMGPNCT 202
Query: 215 EDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGG-MH 273
E EL Q S GF LK++ G PVAF DF++V +S A+ LQ + L SS G +
Sbjct: 203 EAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSEALHTLQGTVLYSSLTGEVLR 262
Query: 274 IEYARSKM 281
++YARS+M
Sbjct: 263 LQYARSRM 270
>gi|186507399|ref|NP_001118504.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|330255001|gb|AEC10095.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 289
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 137/249 (55%), Gaps = 11/249 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFV+GLP+DV+ REI+NLFR PG++ L+ + G + AFA F + Q+AVA +H
Sbjct: 49 VRTLFVAGLPEDVKPREIYNLFREFPGYETSHLR-SSDGAKPFAFAVFSDLQSAVAVMHA 107
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTD 154
LNG+ FD + S LHI+LA+SN + KR + + K+ K+ ES +
Sbjct: 108 LNGMVFDLEKHSTLHIDLAKSNPKSKRSRTDDGWESL-KKLKSWNTTTESGFGSFQTPGM 166
Query: 155 EASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCT 214
+S I + QS+ + AP S KP + PC TLFIAN+GPNCT
Sbjct: 167 SSSAYNTIG------YSPAQSQGIANVAGR-AP-TSRKPSKAA-DPCPTLFIANMGPNCT 217
Query: 215 EDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHI 274
E EL Q S GF LK++ G PVAF DF++V +S A+ LQ + L SS G +
Sbjct: 218 EAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSEALHTLQGTVLYSSLTGEVLR 277
Query: 275 EYARSKMRK 283
+R MRK
Sbjct: 278 LQSRMGMRK 286
>gi|145331097|ref|NP_001078040.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|110737249|dbj|BAF00572.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330255000|gb|AEC10094.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 302
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 131/236 (55%), Gaps = 11/236 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFV+GLP+DV+ REI+NLFR PG++ L+ + G + AFA F + Q+AVA +H
Sbjct: 49 VRTLFVAGLPEDVKPREIYNLFREFPGYETSHLR-SSDGAKPFAFAVFSDLQSAVAVMHA 107
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTD 154
LNG+ FD + S LHI+LA+SN + KR + + K+ K+ ES +
Sbjct: 108 LNGMVFDLEKHSTLHIDLAKSNPKSKRSRTDDGWESL-KKLKSWNTTTESGFGSFQTPGM 166
Query: 155 EASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCT 214
+S I + QS+ + AP S KP + PC TLFIAN+GPNCT
Sbjct: 167 SSSAYNTIG------YSPAQSQGIANVAGR-AP-TSRKPSKAA-DPCPTLFIANMGPNCT 217
Query: 215 EDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRG 270
E EL Q S GF LK++ G PVAF DF++V +S A+ LQ + L SS G
Sbjct: 218 EAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSEALHTLQGTVLYSSLTG 273
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-GGMPVAFADFEEVEQASIAMEGLQD 261
TLF+A L + E+ +PG+ +R+ G P AFA F +++ A M L
Sbjct: 51 TLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSDGAKPFAFAVFSDLQSAVAVMHALNG 110
Query: 262 STLPSSDRGGMHIEYARS 279
+HI+ A+S
Sbjct: 111 MVFDLEKHSTLHIDLAKS 128
>gi|28207154|gb|AAO37217.1| hypothetical protein [Arabidopsis thaliana]
gi|61742673|gb|AAX55157.1| hypothetical protein At2g42245 [Arabidopsis thaliana]
Length = 287
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 131/236 (55%), Gaps = 11/236 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFV+GLP+DV+ REI+NLFR PG++ L+ + G + AFA F + Q+AVA +H
Sbjct: 34 VRTLFVAGLPEDVKPREIYNLFREFPGYETSHLR-SSDGAKPFAFAVFSDLQSAVAVMHA 92
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTD 154
LNG+ FD + S LHI+LA+SN + KR + + K+ K+ ES +
Sbjct: 93 LNGMVFDLEKHSTLHIDLAKSNPKSKRSRTDDGWESL-KKLKSWNTTTESGFGSFQTPGM 151
Query: 155 EASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCT 214
+S I + QS+ + AP S KP + PC TLFIAN+GPNCT
Sbjct: 152 SSSAYNTIG------YSPAQSQGIANVAGR-AP-TSRKPSKAA-DPCPTLFIANMGPNCT 202
Query: 215 EDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRG 270
E EL Q S GF LK++ G PVAF DF++V +S A+ LQ + L SS G
Sbjct: 203 EAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSEALHTLQGTVLYSSLTG 258
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-GGMPVAFADFEEVEQASIAMEGLQD 261
TLF+A L + E+ +PG+ +R+ G P AFA F +++ A M L
Sbjct: 36 TLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSDGAKPFAFAVFSDLQSAVAVMHALNG 95
Query: 262 STLPSSDRGGMHIEYARS 279
+HI+ A+S
Sbjct: 96 MVFDLEKHSTLHIDLAKS 113
>gi|242093984|ref|XP_002437482.1| hypothetical protein SORBIDRAFT_10g027920 [Sorghum bicolor]
gi|241915705|gb|EER88849.1| hypothetical protein SORBIDRAFT_10g027920 [Sorghum bicolor]
Length = 310
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 138/251 (54%), Gaps = 14/251 (5%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLF++GLP D + RE++NLFR PG+ L+ TG+ +Q AFA F + Q+A+ AL
Sbjct: 61 LRTLFIAGLPADAKPREVYNLFRDFPGYVSSHLR-TGKSSQAYAFAVFADQQSALTALSG 119
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR-KPGSGAYVVIDKRTKTEANVQESSSADGDSDT 153
NG+ FD + LH++LA+SNSR KR + + +KRT+ +S + +
Sbjct: 120 TNGMVFDLEKNCSLHVDLAKSNSRSKRLRSDDTSPYSPEKRTRKPRGFPDSGAGSNIYIS 179
Query: 154 DEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQ---PCSTLFIANLG 210
S ++ + + QS + +S ++ S+ P Q PC TLF+ANLG
Sbjct: 180 GMGSSSHSLSG-----YPSAQSYTSLESSASL----SKDPSTFAPQINPPCPTLFVANLG 230
Query: 211 PNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRG 270
P C+E EL S GF LKM+ + G PVAF DF++ ++ A+ LQ L SS
Sbjct: 231 PACSEQELIDVFSSCAGFVKLKMQNKLGAPVAFVDFKDSISSTEAINRLQGVILYSSLGE 290
Query: 271 GMHIEYARSKM 281
GM +EYA+S+M
Sbjct: 291 GMRLEYAKSRM 301
>gi|194697902|gb|ACF83035.1| unknown [Zea mays]
gi|413934630|gb|AFW69181.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 306
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/250 (36%), Positives = 134/250 (53%), Gaps = 12/250 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLF++GLP D + RE++NLFR PG+ L+ TG+ +Q AFA F + Q+A+AAL
Sbjct: 57 VRTLFIAGLPADAKPREVYNLFRDFPGYVSSHLR-TGKSSQAYAFAVFADQQSALAALSA 115
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR-KPGSGAYVVIDKRTKTEANVQESSSADGDSDT 153
NG+ FD + LH++LA+SNSR KR + + +KR + +S + +
Sbjct: 116 TNGMVFDLEKNCSLHVDLAKSNSRSKRLRSDDTSPYSPEKRNRKPRGFPDSGAGSNIYIS 175
Query: 154 DEASPVRNIDSADKGDFVTTQSERATDSGN--AVAPINSEKPYEGGVQPCSTLFIANLGP 211
S ++ T+ A+ S + AP N+ PC TLF+ANL P
Sbjct: 176 GMGSTSHSLSGYPSAQSYTSLESSASLSKDPSTFAPQNNP--------PCPTLFVANLAP 227
Query: 212 NCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGG 271
C+E +L S GF LKM+ + G PVAF DF++ ++ A+ LQ L SS G
Sbjct: 228 ACSEQQLIDVFSSCAGFVKLKMQNKLGAPVAFVDFKDAISSTEAINRLQGVILYSSSGEG 287
Query: 272 MHIEYARSKM 281
M +EYA+S+M
Sbjct: 288 MRLEYAKSRM 297
>gi|449525690|ref|XP_004169849.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like, partial
[Cucumis sativus]
Length = 306
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 149/288 (51%), Gaps = 23/288 (7%)
Query: 5 PYDP--------------YYLPPIHPPP-PPVPPPPYHHQQQDNGINTLFVSGLPDDVRA 49
P+ P +YL HP P H N + TLF++GLP+DV+
Sbjct: 23 PHYPYYQVPPPPSAPPSQHYLSQ-HPSTFASYALPLLPHTTSINEVRTLFIAGLPEDVKP 81
Query: 50 REIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLH 109
REI+NLFR PG++ L+ + Q AFA F + Q+AV A+H +NG+ FD + SVL+
Sbjct: 82 REIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVNGMVFDLEKQSVLY 141
Query: 110 IELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKGD 169
++LA+SNSR KR DK+ K ++ S+ D + S + N + +
Sbjct: 142 VDLAKSNSRSKRTRTEEERYGSDKKAK--VSIIPRSTPDPGLGSTHMSGMGN-SAYNTIG 198
Query: 170 FVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFN 229
+ + QS + D+ + + P PC TLF+ANLGP CTE EL Q PGF
Sbjct: 199 YPSAQSHGSFDNKTVNDTVAANIPQN---PPCPTLFVANLGPGCTEQELIQIFLRCPGFL 255
Query: 230 MLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRG-GMHIEY 276
LKM++ G PVAF DF++ ++ A+ LQ S L SS G GM +EY
Sbjct: 256 KLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGMRLEY 303
>gi|168036913|ref|XP_001770950.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677814|gb|EDQ64280.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 212
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 111/189 (58%), Gaps = 7/189 (3%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLF+SGLPDD++ REI+NLFR G++ CQLK++GRG Q+VAFA F + TA+ A E
Sbjct: 15 VKTLFLSGLPDDIKEREIYNLFRNFEGYESCQLKFSGRGFQIVAFAVFTDQATALKAKEE 74
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTD 154
LNG+KFDPQ+G+VLHIELAR+NSR KR + T++ + G T
Sbjct: 75 LNGLKFDPQTGAVLHIELARANSRTKRSRS------VKTLTESFCGTVFGFTLTGVGATL 128
Query: 155 EASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCT 214
+ D F S+ T+ + P G PCSTLFIANLGP+CT
Sbjct: 129 HMPGLHPSIFNDMPGFPPPPSD-FTNLRRFQGMVPLPPPAPGSNPPCSTLFIANLGPSCT 187
Query: 215 EDELKQTLS 223
E+EL Q LS
Sbjct: 188 EEELSQLLS 196
>gi|326532978|dbj|BAJ89334.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/252 (36%), Positives = 136/252 (53%), Gaps = 13/252 (5%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLF++GLP DV+ RE++NLFR PG+ ++ +G+ Q AFA F + +A+AA+
Sbjct: 67 LRTLFIAGLPADVKPREVYNLFRDFPGYVSSHVR-SGKSAQSYAFAVFGDQPSALAAVSA 125
Query: 95 LNGVKFDPQSGSVLHIELARSNSRK--KRKPGSGAYVVIDKRTKTEANVQESSSADGDSD 152
NG+ FD + +H++LA+SNSR ++P S Y K T +A G
Sbjct: 126 TNGLVFDLEKNCSIHVDLAKSNSRSTSSKRPRSD-YEDFPKSTGKKARSPRGRPDSGAGS 184
Query: 153 TDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQ---PCSTLFIANL 209
+ S + N + G ++ TD G++ A S+ P Q PC TLF+ANL
Sbjct: 185 NNHMSGMGNSSHSLNG----YPAQSYTDFGSSAA--FSKDPSMFAPQNNPPCPTLFVANL 238
Query: 210 GPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDR 269
G +E EL S GF LKM+ + G PVAF DF++ ++ A+ LQ + L SS
Sbjct: 239 GQTVSERELTDVFSGCEGFIKLKMQNKFGAPVAFVDFKDDHSSTEALNRLQGAILHSSSG 298
Query: 270 GGMHIEYARSKM 281
GM +EYA+S+M
Sbjct: 299 EGMRLEYAKSRM 310
>gi|195641146|gb|ACG40041.1| cell wall integrity protein scw1 [Zea mays]
gi|195642380|gb|ACG40658.1| cell wall integrity protein scw1 [Zea mays]
Length = 321
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 128/258 (49%), Gaps = 19/258 (7%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+F++GLP DV+ RE+HNL R PGF+ Q+ + +G+Q + FA F A+AA
Sbjct: 48 VRTIFITGLPADVKERELHNLLRWLPGFEASQINF--KGDQPMGFALFSTAHQAIAAKTA 105
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVV-IDKRTKTEANVQESS-------- 145
L + FD ++ LH E+A+ N KR G A V KR +T + S
Sbjct: 106 LQDMVFDAETKVALHTEMAKKNLFVKRCVGIDANAVDQSKRLRTGGDYTHSPYAPPFHPP 165
Query: 146 ----SADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPC 201
S G A P N +A V S A AP+ + K PC
Sbjct: 166 PPAVSMWGTPGYITAPPPYNPYAAYPVPPVAMTSPAPVTGPTAYAPVQNTKDNP----PC 221
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQD 261
+TLFI NLG E+EL+ SV PGF +K+ + V F +FE+V A+ + LQ
Sbjct: 222 NTLFIGNLGDTVVEEELRSLFSVQPGFKQMKVLRQDRNTVCFIEFEDVNAATSVHQTLQG 281
Query: 262 STLPSSDRGGMHIEYARS 279
+ +PSS RGGM I+++++
Sbjct: 282 AVIPSSGRGGMRIQFSKN 299
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 10/139 (7%)
Query: 2 AHPPYDPYYLPPIHP----PPPPVPPP----PYHHQQQDNGINTLFVSGLPDDVRAREIH 53
A PPY+PY P+ P P PV P P + + + NTLF+ L D V E+
Sbjct: 180 APPPYNPYAAYPVPPVAMTSPAPVTGPTAYAPVQNTKDNPPCNTLFIGNLGDTVVEEELR 239
Query: 54 NLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELA 113
+LF +PGF Q+K + V F F + A + L G + I+ +
Sbjct: 240 SLFSVQPGFK--QMKVLRQDRNTVCFIEFEDVNAATSVHQTLQGAVIPSSGRGGMRIQFS 297
Query: 114 RSNSRKKRKPGSGAYVVID 132
++ +++ +G V++
Sbjct: 298 KNPFGRRKDSAAGLASVLN 316
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
T+FI L + E EL L PGF ++ +G P+ FA F QA A LQD
Sbjct: 50 TIFITGLPADVKERELHNLLRWLPGFEASQINFKGDQPMGFALFSTAHQAIAAKTALQDM 109
Query: 263 TLPSSDRGGMHIEYARSKM 281
+ + +H E A+ +
Sbjct: 110 VFDAETKVALHTEMAKKNL 128
>gi|226531816|ref|NP_001149394.1| LOC100283020 [Zea mays]
gi|195626938|gb|ACG35299.1| cell wall integrity protein scw1 [Zea mays]
gi|413921012|gb|AFW60944.1| cell wall integrity protein scw1 [Zea mays]
Length = 321
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 128/258 (49%), Gaps = 19/258 (7%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+F++GLP DV+ RE+HNL R PGF+ Q+ + +G+Q + FA F A+AA
Sbjct: 48 VRTIFITGLPADVKERELHNLLRWLPGFEASQINF--KGDQPMGFALFSTAHQAIAAKTA 105
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVV-IDKRTKTEANVQESS-------- 145
L + FD ++ LH E+A+ N KR G A V KR +T + S
Sbjct: 106 LQDMVFDAETKVALHTEMAKKNLFVKRCVGIDANAVDQSKRLRTGGDYTHSPYAPPFHPP 165
Query: 146 ----SADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPC 201
S G A P N +A V S A AP+ + K PC
Sbjct: 166 PPAVSMWGTPGYITAPPPYNPYAAYPVPPVAMTSPAPVTGPTAYAPVQNTKDNP----PC 221
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQD 261
+TLFI NLG E+EL+ SV PGF +K+ + V F +FE+V A+ + LQ
Sbjct: 222 NTLFIGNLGDTVVEEELRSLFSVQPGFKQMKVLRQDRNTVCFIEFEDVNAATSVHQTLQG 281
Query: 262 STLPSSDRGGMHIEYARS 279
+ +PSS RGGM I+++++
Sbjct: 282 AVIPSSGRGGMRIQFSKN 299
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 10/139 (7%)
Query: 2 AHPPYDPYYLPPIHP----PPPPVPPP----PYHHQQQDNGINTLFVSGLPDDVRAREIH 53
A PPY+PY P+ P P PV P P + + + NTLF+ L D V E+
Sbjct: 180 APPPYNPYAAYPVPPVAMTSPAPVTGPTAYAPVQNTKDNPPCNTLFIGNLGDTVVEEELR 239
Query: 54 NLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELA 113
+LF +PGF Q+K + V F F + A + L G + I+ +
Sbjct: 240 SLFSVQPGFK--QMKVLRQDRNTVCFIEFEDVNAATSVHQTLQGAVIPSSGRGGMRIQFS 297
Query: 114 RSNSRKKRKPGSGAYVVID 132
++ +++ +G V++
Sbjct: 298 KNPFGRRKDSAAGLASVLN 316
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
T+FI L + E EL L PGF ++ +G P+ FA F QA A LQD
Sbjct: 50 TIFITGLPADVKERELHNLLRWLPGFEASQINFKGDQPMGFALFSTAHQAIAAKTALQDM 109
Query: 263 TLPSSDRGGMHIEYARSKM 281
+ + +H E A+ +
Sbjct: 110 VFDAETKVALHTEMAKKNL 128
>gi|413921013|gb|AFW60945.1| hypothetical protein ZEAMMB73_771004 [Zea mays]
Length = 314
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 125/257 (48%), Gaps = 19/257 (7%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+F++GLP DV+ RE+HNL R PGF+ Q+ + +G+Q + FA F A+AA
Sbjct: 48 VRTIFITGLPADVKERELHNLLRWLPGFEASQINF--KGDQPMGFALFSTAHQAIAAKTA 105
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVV-IDKRTKTEANVQESS-------- 145
L + FD ++ LH E+A+ N KR G A V KR +T + S
Sbjct: 106 LQDMVFDAETKVALHTEMAKKNLFVKRCVGIDANAVDQSKRLRTGGDYTHSPYAPPFHPP 165
Query: 146 ----SADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPC 201
S G A P N +A V S A AP+ + K PC
Sbjct: 166 PPAVSMWGTPGYITAPPPYNPYAAYPVPPVAMTSPAPVTGPTAYAPVQNTKDNP----PC 221
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQD 261
+TLFI NLG E+EL+ SV PGF +K+ + V F +FE+V A+ + LQ
Sbjct: 222 NTLFIGNLGDTVVEEELRSLFSVQPGFKQMKVLRQDRNTVCFIEFEDVNAATSVHQTLQG 281
Query: 262 STLPSSDRGGMHIEYAR 278
+ +PSS RGGM I + R
Sbjct: 282 AVIPSSGRGGMRIHFQR 298
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
T+FI L + E EL L PGF ++ +G P+ FA F QA A LQD
Sbjct: 50 TIFITGLPADVKERELHNLLRWLPGFEASQINFKGDQPMGFALFSTAHQAIAAKTALQDM 109
Query: 263 TLPSSDRGGMHIEYARSKM 281
+ + +H E A+ +
Sbjct: 110 VFDAETKVALHTEMAKKNL 128
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 2 AHPPYDPYYLPPIHP----PPPPVPPP----PYHHQQQDNGINTLFVSGLPDDVRAREIH 53
A PPY+PY P+ P P PV P P + + + NTLF+ L D V E+
Sbjct: 180 APPPYNPYAAYPVPPVAMTSPAPVTGPTAYAPVQNTKDNPPCNTLFIGNLGDTVVEEELR 239
Query: 54 NLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSG 105
+LF +PGF Q+K + V F F + A + L G P SG
Sbjct: 240 SLFSVQPGFK--QMKVLRQDRNTVCFIEFEDVNAATSVHQTLQGAVI-PSSG 288
>gi|452825214|gb|EME32212.1| RNA-binding protein, putative [Galdieria sulphuraria]
Length = 333
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 131/260 (50%), Gaps = 9/260 (3%)
Query: 29 QQQDNGINTLFVSGLPDDVRAREIHNLFR-RKPGFDFCQLKYTGRGNQVVAFATFVNHQT 87
Q+ ++ + TLF++G P DV RE+HNLFR R P +D C +K + R + V FA F +
Sbjct: 20 QESEDTVRTLFITGFPADVLEREVHNLFRFRYPLYDGCIIKNSSRRKEPVVFAVFRTREE 79
Query: 88 AVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSA 147
A A+ + +G+ FDP GS L IE A+SN+R KR + ++R + + +
Sbjct: 80 AEEAMKDFDGIVFDPALGSKLKIEFAKSNTRVKRDWAHSSSFEDNRRNEGRRVEKRYRGS 139
Query: 148 DGDSDTDEASPVRNIDSADKGDFVTTQSERATD-----SGNAVAPINSEKPYEGGVQPCS 202
D T V + + S N P+ S + CS
Sbjct: 140 DYSLGTGTGGVVAQLPLFTQPGSWNLASNNTPGLQYPMFSNVSLPLTSNPSFNQNA--CS 197
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGG-MPVAFADFEEVEQASIAMEGLQD 261
TLF+ NL P+ T+ EL+ S GF +++ + PVAF +F + ++ AM+ Q+
Sbjct: 198 TLFVGNLSPSVTQAELENLFSRCTGFRRVRLNIKDERAPVAFVEFTDSVYSTQAMQQCQN 257
Query: 262 STLPSSDRGGMHIEYARSKM 281
LPSS++GG+ IE+AR+KM
Sbjct: 258 VPLPSSEKGGIRIEFARNKM 277
>gi|443713681|gb|ELU06415.1| hypothetical protein CAPTEDRAFT_112394, partial [Capitella teleta]
Length = 347
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 136/298 (45%), Gaps = 51/298 (17%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK TG+ + V F TF + A AA
Sbjct: 2 VRTLFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTGKNGKTTSPVGFVTFTSRVAAEAA 61
Query: 92 LHELN-GVKFDPQSGSVLHIELARSNSRKKR------KPGSGAYVVIDKRTKTEANVQES 144
+L GV+FDP L +E A+SN++ + +P + I T E
Sbjct: 62 KQDLQQGVRFDPDLPQTLRLEFAKSNTKVTKPKQQSPQPAATHPTFIHPLTGQEIGGAFF 121
Query: 145 SSADG----------DSDTDEASPVRNIDSADKGDFVTTQSERATD-SGNAVAPINSEKP 193
G E SP + + + + Q A SG+ A +NS P
Sbjct: 122 PGMPGAEAWPGHPLVTGAYTELSPALHHPALLQHPALAAQVHPALAMSGHHAAAMNSAVP 181
Query: 194 YE------------GGVQ------------------PCSTLFIANLGPNCTEDELKQTLS 223
+ GG PCSTLF+ANLGP C+E ELK
Sbjct: 182 HPHMAASPVLGSPVGGATSTSTLTSPSLATATSTHAPCSTLFVANLGPFCSEQELKDLFQ 241
Query: 224 VYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
GF L+M +GG PVAF ++++V A AM LQ L SS+RGG+ IEYAR+KM
Sbjct: 242 SISGFLRLRMHNKGGSPVAFVEYQDVRCAMEAMLKLQGCVLFSSERGGIRIEYARNKM 299
>gi|413921011|gb|AFW60943.1| hypothetical protein ZEAMMB73_771004 [Zea mays]
Length = 318
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 126/258 (48%), Gaps = 22/258 (8%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+F++GLP DV+ RE+HNL R PGF+ Q+ + +G+Q + FA F A+AA
Sbjct: 48 VRTIFITGLPADVKERELHNLLRWLPGFEASQINF--KGDQPMGFALFSTAHQAIAAKTA 105
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVV-IDKRTKTEANVQESS-------- 145
L + FD ++ LH E+A+ N KR G A V KR +T + S
Sbjct: 106 LQDMVFDAETKVALHTEMAKKNLFVKRCVGIDANAVDQSKRLRTGGDYTHSPYAPPFHPP 165
Query: 146 ----SADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPC 201
S G A P N +A V S A AP+ P C
Sbjct: 166 PPAVSMWGTPGYITAPPPYNPYAAYPVPPVAMTSPAPVTGPTAYAPVQDNPP-------C 218
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQD 261
+TLFI NLG E+EL+ SV PGF +K+ + V F +FE+V A+ + LQ
Sbjct: 219 NTLFIGNLGDTVVEEELRSLFSVQPGFKQMKVLRQDRNTVCFIEFEDVNAATSVHQTLQG 278
Query: 262 STLPSSDRGGMHIEYARS 279
+ +PSS RGGM I+++++
Sbjct: 279 AVIPSSGRGGMRIQFSKN 296
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 7/136 (5%)
Query: 2 AHPPYDPYYLPPIHP----PPPPVPPPPYHHQQQDN-GINTLFVSGLPDDVRAREIHNLF 56
A PPY+PY P+ P P PV P + QDN NTLF+ L D V E+ +LF
Sbjct: 180 APPPYNPYAAYPVPPVAMTSPAPVTGPTAYAPVQDNPPCNTLFIGNLGDTVVEEELRSLF 239
Query: 57 RRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSN 116
+PGF Q+K + V F F + A + L G + I+ +++
Sbjct: 240 SVQPGFK--QMKVLRQDRNTVCFIEFEDVNAATSVHQTLQGAVIPSSGRGGMRIQFSKNP 297
Query: 117 SRKKRKPGSGAYVVID 132
+++ +G V++
Sbjct: 298 FGRRKDSAAGLASVLN 313
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
T+FI L + E EL L PGF ++ +G P+ FA F QA A LQD
Sbjct: 50 TIFITGLPADVKERELHNLLRWLPGFEASQINFKGDQPMGFALFSTAHQAIAAKTALQDM 109
Query: 263 TLPSSDRGGMHIEYARSKM 281
+ + +H E A+ +
Sbjct: 110 VFDAETKVALHTEMAKKNL 128
>gi|40253748|dbj|BAD05688.1| putative mec-8 [Oryza sativa Japonica Group]
gi|40253912|dbj|BAD05845.1| putative mec-8 [Oryza sativa Japonica Group]
Length = 315
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 127/256 (49%), Gaps = 20/256 (7%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+F++GLP DV+ RE+HNL R PGF+ Q+ + +G+Q + FA F + A+AA
Sbjct: 61 VRTIFITGLPTDVKERELHNLLRWLPGFEASQINF--KGDQPMGFALFSSAHHAIAAKAA 118
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVV-IDKRTKTEANVQESS-------- 145
L + FD ++ + LH E+A+ N KR G+ A + KR +T + S
Sbjct: 119 LQDLIFDAETKTALHTEMAKKNLFVKRGVGNDANAMDQSKRLRTGGDYTHSPYAAPPYHP 178
Query: 146 -----SADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQP 200
S G A P N +A V S A AP+ + K P
Sbjct: 179 PPPAVSMWGTPGYIAAPPPYNHYAAYSVPPVAMTSPSPVPGPTAYAPVQNTKDNP----P 234
Query: 201 CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQ 260
C+TLFI NLG E+EL+ SV PG+ +K+ + V F +FE+V AS LQ
Sbjct: 235 CNTLFIGNLGETVIEEELRSLFSVQPGYKQMKVLRQDRNTVCFIEFEDVNAASAVHHNLQ 294
Query: 261 DSTLPSSDRGGMHIEY 276
+ +PSS RGGM I+Y
Sbjct: 295 GAVIPSSGRGGMRIQY 310
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 35/79 (44%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
T+FI L + E EL L PGF ++ +G P+ FA F A A LQD
Sbjct: 63 TIFITGLPTDVKERELHNLLRWLPGFEASQINFKGDQPMGFALFSSAHHAIAAKAALQDL 122
Query: 263 TLPSSDRGGMHIEYARSKM 281
+ + +H E A+ +
Sbjct: 123 IFDAETKTALHTEMAKKNL 141
>gi|218198782|gb|EEC81209.1| hypothetical protein OsI_24241 [Oryza sativa Indica Group]
Length = 283
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 117/228 (51%), Gaps = 32/228 (14%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLF++GLP D +ARE++NLFR PG+ L+ +G+ +Q AFA F + +A+AA+
Sbjct: 68 LRTLFIAGLPGDAKAREVYNLFRDFPGYVSSHLRTSGKSSQAYAFAVFADQPSALAAMSA 127
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTD 154
NG FD ++ LH++LA+SNSR KR RT + A
Sbjct: 128 TNGRIFDLENNCTLHVDLAKSNSRSKR-----------SRTDDVPSYSSEKKARNPRGFP 176
Query: 155 EASPVRNIDSADKGD-------FVTTQS----ERATDSGN--AVAPINSEKPYEGGVQPC 201
++ NI + G+ + + QS E A S + A AP N+ PC
Sbjct: 177 DSGAGSNIHMSGMGNSSHSLNGYPSAQSYTNFEPAAFSKDPSAFAPQNNP--------PC 228
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEV 249
TLF+ANLGP C+E EL S GF +KM+ + G PVAF DF+ V
Sbjct: 229 PTLFVANLGPTCSEQELIDVFSSCAGFIKVKMQNKFGAPVAFVDFKGV 276
>gi|222636114|gb|EEE66246.1| hypothetical protein OsJ_22424 [Oryza sativa Japonica Group]
Length = 283
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 117/228 (51%), Gaps = 32/228 (14%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLF++GLP D +ARE++NLFR PG+ L+ +G+ +Q AFA F + +A+AA+
Sbjct: 68 LRTLFIAGLPGDAKAREVYNLFRDFPGYVSSHLRTSGKSSQAYAFAVFADQPSALAAMSA 127
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTD 154
NG FD ++ LH++LA+SNSR KR RT + A
Sbjct: 128 TNGRIFDLENNCTLHVDLAKSNSRSKR-----------SRTDDVPSYSSEKKARNPRGFP 176
Query: 155 EASPVRNIDSADKGD-------FVTTQS----ERATDSGN--AVAPINSEKPYEGGVQPC 201
++ NI + G+ + + QS E A S + A AP N+ PC
Sbjct: 177 DSGAGSNIHMSGMGNSSHSLNGYPSAQSYTNFEPAAFSKDPSAFAPQNNP--------PC 228
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEV 249
TLF+ANLGP C+E EL S GF +KM+ + G PVAF DF+ V
Sbjct: 229 PTLFVANLGPTCSEQELIDVFSSCAGFIKVKMQNKFGAPVAFVDFKGV 276
>gi|242081063|ref|XP_002445300.1| hypothetical protein SORBIDRAFT_07g008520 [Sorghum bicolor]
gi|241941650|gb|EES14795.1| hypothetical protein SORBIDRAFT_07g008520 [Sorghum bicolor]
Length = 320
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 129/258 (50%), Gaps = 19/258 (7%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+F++GLP DV+ RE+HNL R PGF+ Q+ + +G+Q + FA F + A+AA
Sbjct: 47 VRTIFITGLPADVKERELHNLLRWLPGFEASQINF--KGDQPMGFALFSSAHQAIAAKAA 104
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVV-IDKRTKTEANVQESS-------- 145
L + FD ++ LH E+A+ N KR G A V KR +T + S
Sbjct: 105 LQDMVFDAETQVALHTEMAKKNLFVKRGVGIDANAVDQSKRLRTGGDYTHSPYAPPFHPP 164
Query: 146 ----SADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPC 201
S G A P N +A V S A AP+ + K PC
Sbjct: 165 PPAVSMWGTPGYITAPPPYNPYAAYPVPPVAMTSPSPVTGPTAYAPVQNTKDNP----PC 220
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQD 261
+TLFI NLG E+EL+ SV PG+ +K+ + V F +FE+V A+ + LQ
Sbjct: 221 NTLFIGNLGDTVVEEELRSLFSVQPGYKQMKVLRQDRNTVCFIEFEDVNAATSVHQTLQG 280
Query: 262 STLPSSDRGGMHIEYARS 279
+ +PSS RGGM I+++++
Sbjct: 281 AVIPSSGRGGMRIQFSKN 298
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Query: 2 AHPPYDPYYLPPIHP----PPPPVPPP----PYHHQQQDNGINTLFVSGLPDDVRAREIH 53
A PPY+PY P+ P P PV P P + + + NTLF+ L D V E+
Sbjct: 179 APPPYNPYAAYPVPPVAMTSPSPVTGPTAYAPVQNTKDNPPCNTLFIGNLGDTVVEEELR 238
Query: 54 NLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELA 113
+LF +PG+ Q+K + V F F + A + L G + I+ +
Sbjct: 239 SLFSVQPGYK--QMKVLRQDRNTVCFIEFEDVNAATSVHQTLQGAVIPSSGRGGMRIQFS 296
Query: 114 RSNSRKKRKPGSGAYVVID 132
++ +++ G V++
Sbjct: 297 KNPFGRRKDSAGGLASVLN 315
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
T+FI L + E EL L PGF ++ +G P+ FA F QA A LQD
Sbjct: 49 TIFITGLPADVKERELHNLLRWLPGFEASQINFKGDQPMGFALFSSAHQAIAAKAALQDM 108
Query: 263 TLPSSDRGGMHIEYARSKM 281
+ + +H E A+ +
Sbjct: 109 VFDAETQVALHTEMAKKNL 127
>gi|357145342|ref|XP_003573610.1| PREDICTED: uncharacterized protein LOC100829014 [Brachypodium
distachyon]
Length = 317
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 19/257 (7%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+F++GLP DV+ RE+HNL R PGF+ Q+ + +G+Q + FA F A AA
Sbjct: 46 VRTIFITGLPVDVKERELHNLLRWLPGFEASQINF--KGDQPMGFALFSYAHHANAAKAA 103
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSAD------ 148
L + FD ++ S LHIE+A+ N KR + A + KR +T + S A
Sbjct: 104 LQDLVFDAETKSALHIEMAKKNLFIKRGADANA-MDQSKRLRTGGDYTHSPYAPPFHPPP 162
Query: 149 ------GDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCS 202
G++ A P N +A V S A AP+ + K PC+
Sbjct: 163 PAVAVWGNAGYLAAPPPYNPYAAYPVPPVPMASPSPLPGPTAYAPVQNTKDNP----PCN 218
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
TLFI NLG E+EL+ SV PGF +K+ + V F +F++V AS LQ +
Sbjct: 219 TLFIGNLGETVVEEELRGLFSVQPGFKQMKVLRQDRNTVCFIEFDDVSAASAVHHTLQGA 278
Query: 263 TLPSSDRGGMHIEYARS 279
+PSS RGGM I+++++
Sbjct: 279 VIPSSGRGGMRIQFSKN 295
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 2 AHPPYDPYYLPPIHP----PPPPVPPP----PYHHQQQDNGINTLFVSGLPDDVRAREIH 53
A PPY+PY P+ P P P+P P P + + + NTLF+ L + V E+
Sbjct: 176 APPPYNPYAAYPVPPVPMASPSPLPGPTAYAPVQNTKDNPPCNTLFIGNLGETVVEEELR 235
Query: 54 NLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELA 113
LF +PGF Q+K + V F F + A A H L G + I+ +
Sbjct: 236 GLFSVQPGFK--QMKVLRQDRNTVCFIEFDDVSAASAVHHTLQGAVIPSSGRGGMRIQFS 293
Query: 114 RSNSRKKRK 122
+ N +RK
Sbjct: 294 K-NPFGRRK 301
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%)
Query: 197 GVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAM 256
G T+FI L + E EL L PGF ++ +G P+ FA F A+ A
Sbjct: 42 GSDEVRTIFITGLPVDVKERELHNLLRWLPGFEASQINFKGDQPMGFALFSYAHHANAAK 101
Query: 257 EGLQDSTLPSSDRGGMHIEYARSKM 281
LQD + + +HIE A+ +
Sbjct: 102 AALQDLVFDAETKSALHIEMAKKNL 126
>gi|255568059|ref|XP_002525006.1| RNA-binding protein with multiple splicing, putative [Ricinus
communis]
gi|223535714|gb|EEF37378.1| RNA-binding protein with multiple splicing, putative [Ricinus
communis]
Length = 337
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 127/264 (48%), Gaps = 22/264 (8%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+F++GLP+DV+ RE+ NL R PG++ Q+ Y +G + + FA F Q A+AA
Sbjct: 58 VRTIFITGLPEDVKERELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTSQFAIAAKEA 115
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRK--PGSGAYVVIDKRTKTEANVQESSSADGDSD 152
L + FD +S S+LH E+A+ N KR S AY KR +T + ++
Sbjct: 116 LQDMLFDAESKSILHTEMAKKNLFVKRGIVADSNAYDQ-SKRLRTGGDYSHTAYTTPSPF 174
Query: 153 TDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPI-----------NSEKPYEGGVQ-- 199
+PV G +G V + +S P +
Sbjct: 175 HPPPAPVW----GPHGYMAPAPPPYDPYAGYPVPQVPMPAPAPMPAPSSYLPVQNTKDNP 230
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TLFI NLG N EDEL+ SV PGF +K+ + V F +FE+V AS L
Sbjct: 231 PCNTLFIGNLGENINEDELRGLFSVQPGFKQMKVLRQERHTVCFIEFEDVNSASNVHRSL 290
Query: 260 QDSTLPSSDRGGMHIEYARSKMRK 283
Q + +PSS GM I+Y+++ K
Sbjct: 291 QGAVIPSSGSVGMRIQYSKNPFGK 314
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
NTLF+ L +++ E+ LF +PGF Q+K + V F F + +A L
Sbjct: 233 NTLFIGNLGENINEDELRGLFSVQPGFK--QMKVLRQERHTVCFIEFEDVNSASNVHRSL 290
Query: 96 NGVKFDPQSGSV-LHIELARSNSRKKRKPGS 125
G P SGSV + I+ ++ N KRK GS
Sbjct: 291 QGAVI-PSSGSVGMRIQYSK-NPFGKRKDGS 319
>gi|21615411|emb|CAD33925.1| proline rich protein 3 [Cicer arietinum]
Length = 284
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 126/261 (48%), Gaps = 15/261 (5%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+F++GLP+DV+ REI NL R PGF+ QL + + + + FA F + A+AA
Sbjct: 4 VRTIFITGLPEDVKEREIQNLLRWLPGFEASQLNF--KAEKPMGFALFSSPHQAIAAKDI 61
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVID--KRTKTEANVQESSSADGDSD 152
L + FDP S SVLH E+A+ N KR G+ A V D KR +T + +
Sbjct: 62 LQDMLFDPDSKSVLHTEMAKKNLFVKRGIGADA-VAFDQSKRLRTAGDYTHTGYVTPSPF 120
Query: 153 TDEASPVRN--------IDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQ--PCS 202
PV + + ++A +S P + PC+
Sbjct: 121 HPPPPPVWGPHGYMAPPPPPPYDPYAGYPVAPVPMPAPVSIAAPSSYVPVQNTKDNPPCN 180
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
TLFI NLG N E+E++ SV PGF +K+ + V F +FE+V A+ LQ +
Sbjct: 181 TLFIGNLGENINEEEVRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNLQGA 240
Query: 263 TLPSSDRGGMHIEYARSKMRK 283
+PSS GM I+Y+++ K
Sbjct: 241 VIPSSGSVGMRIQYSKNPFGK 261
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
NTLF+ L +++ E+ LF +PGF Q+K + V F F + +A H L
Sbjct: 180 NTLFIGNLGENINEEEVRGLFSVQPGFK--QMKILRQERHTVCFIEFEDVNSATNVHHNL 237
Query: 96 NGVKFDPQSGSV-LHIELARSNSRKKRKPGS 125
G P SGSV + I+ ++ N KRK G+
Sbjct: 238 QGAVI-PSSGSVGMRIQYSK-NPFGKRKDGN 266
>gi|388516627|gb|AFK46375.1| unknown [Medicago truncatula]
Length = 314
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 126/260 (48%), Gaps = 14/260 (5%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+F++GLP+DV+ RE+ NL R PGF+ QL + + + + FA F + A+AA
Sbjct: 35 VRTIFITGLPEDVKERELQNLCRWLPGFEASQLNF--KAEKPMGFALFNSPHQAIAAKDI 92
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVID--KRTKTEANVQESSSADGDSD 152
L + FDP++ SVLH E+A+ N KR G+ A V D KR +T + +
Sbjct: 93 LQDMLFDPEAKSVLHTEMAKKNLFVKRGIGADA-VAFDQSKRLRTAGDYNHTGYVTPSPF 151
Query: 153 TDEASPVRNIDSADKGDFVTTQSERATDSGNAV---APINSEKPYEGGVQ------PCST 203
PV A V AP++ +Q PC+T
Sbjct: 152 HPPPPPVWGPHGYMAPPPPPPYDPYAGYPVAQVPMPAPVSIAPSSYVPIQNTKDNPPCNT 211
Query: 204 LFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDST 263
LFI NLG N E+E++ SV PGF +K+ + V F +FE+V A+ LQ +
Sbjct: 212 LFIGNLGENINEEEVRGLFSVQPGFKQMKIIRQERHTVCFIEFEDVNSATNVHHNLQGAV 271
Query: 264 LPSSDRGGMHIEYARSKMRK 283
+PSS GM I+Y+++ K
Sbjct: 272 IPSSGSIGMRIQYSKNPFGK 291
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
NTLF+ L +++ E+ LF +PGF Q+K + V F F + +A H L
Sbjct: 210 NTLFIGNLGENINEEEVRGLFSVQPGFK--QMKIIRQERHTVCFIEFEDVNSATNVHHNL 267
Query: 96 NGVKFDPQSGSV-LHIELARSNSRKKRKPGS 125
G P SGS+ + I+ ++ N KR+ G+
Sbjct: 268 QGAVI-PSSGSIGMRIQYSK-NPFGKREDGT 296
>gi|440804858|gb|ELR25722.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 287
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 134/282 (47%), Gaps = 53/282 (18%)
Query: 30 QQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAV 89
Q D + TL++SG P DV+ REIHNLFR G++ LK G VAF TF +H+ AV
Sbjct: 17 QVDGTMRTLWLSGFPLDVKHREIHNLFRPYRGYEDSILKPNG-----VAFVTFTSHEAAV 71
Query: 90 AALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADG 149
AA ++ G+ FDP VL +E A+ NS+++R+ +ES+S +
Sbjct: 72 AAKSDITGLHFDPDGTDVLKVEFAKQNSKRRRE------------------AEESASPEF 113
Query: 150 DSDTDEASPVRNIDSADKGDFVTTQS------ERATDSGNAVAP-----INSEKP----Y 194
S EA ++ + G S RA +G P ++S P Y
Sbjct: 114 WSKEREAKRIKRALAGGGGGGGGPTSIDVNAMYRAGLAGYPFNPPSMYGLSSMGPVPDAY 173
Query: 195 EGGVQ---------------PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM 239
G Q P STLFI+NLG +E E+ + + GF ++ RG
Sbjct: 174 LLGGQDRLPKPAGKSLVRFPPGSTLFISNLGTASSEQEISEVFGAFQGFVRAQLYNRGHN 233
Query: 240 PVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
AF +++ E ++ A+ LQ S L SSD+G M IEYA++ M
Sbjct: 234 INAFVQYKDYESSTQALNHLQGSVLMSSDKGPMKIEYAKNPM 275
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
+TLF+S L +EI +F GF QL RG+ + AF + +++++ AL+ L
Sbjct: 196 STLFISNLGTASSEQEISEVFGAFQGFVRAQL--YNRGHNINAFVQYKDYESSTQALNHL 253
Query: 96 NGVKFDPQSGSVLHIELARSNSRKKRKPGSGAY 128
G + IE A+ N RK G Y
Sbjct: 254 QGSVLMSSDKGPMKIEYAK-NPMVIRKEDQGPY 285
>gi|356526326|ref|XP_003531769.1| PREDICTED: uncharacterized protein LOC100817421 [Glycine max]
Length = 318
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 122/261 (46%), Gaps = 15/261 (5%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+F++GLP+DV+ RE+ NL R PGF+ QL + + + + FA F A+ A
Sbjct: 39 VRTIFITGLPEDVKERELQNLLRWLPGFEASQLNF--KAEKPMGFALFSAPHQALTAKDI 96
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVV-IDKRTKTEANVQESSSADGDSDT 153
L + FDP + SVLH E+A+ N KR G+ A KR +T + +
Sbjct: 97 LQDMLFDPDTKSVLHTEMAKKNLFVKRGIGADAGAFDQSKRLRTAGDYTHTGYTSPSPFH 156
Query: 154 DEASPVRNIDSADKGDFVTTQSERATDSGNAV-----APINSEKPYEGGVQ------PCS 202
PV A V API + Y VQ PC+
Sbjct: 157 PPPPPVWGPHGYMAPPPPPPYDPYAGYPVAPVPMPTPAPIAAPSTYV-PVQNTKDNPPCN 215
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
TLFI NLG N E+E++ SV PGF +K+ + V F +FE+V A+ LQ +
Sbjct: 216 TLFIGNLGENINEEEVRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNLQGA 275
Query: 263 TLPSSDRGGMHIEYARSKMRK 283
+PSS GM I+Y+++ K
Sbjct: 276 VIPSSGSIGMRIQYSKNPFGK 296
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 16 PPPPPVPPP----PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTG 71
P P P+ P P + + + NTLF+ L +++ E+ LF +PGF Q+K
Sbjct: 191 PTPAPIAAPSTYVPVQNTKDNPPCNTLFIGNLGENINEEEVRGLFSVQPGFK--QMKILR 248
Query: 72 RGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSV-LHIELARSNSRKKRK 122
+ V F F + +A H L G P SGS+ + I+ ++ N KRK
Sbjct: 249 QERHTVCFIEFEDVNSATNVHHNLQGAVI-PSSGSIGMRIQYSK-NPFGKRK 298
>gi|225443274|ref|XP_002273578.1| PREDICTED: cell wall integrity protein scw1-like [Vitis vinifera]
Length = 328
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 127/264 (48%), Gaps = 22/264 (8%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+F+SGLP+DV+ RE+ NL R PG++ Q+ + +G + FA F Q AVAA
Sbjct: 49 VRTIFISGLPEDVKERELQNLLRWLPGYEASQVNF--KGEHPMGFALFSTPQLAVAAKDA 106
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRK--PGSGAYVVIDKRTKTEANVQESSSADGDSD 152
L + FD +S SVLH E+A+ N KR S AY KR +T + + +
Sbjct: 107 LQEMVFDAESKSVLHTEMAKKNLFVKRGIVADSSAYDQ-SKRLRTGGDYTHTGYSSPSPF 165
Query: 153 TDEASPVRN-------------IDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQ 199
+PV A V + + ++ P+ + K
Sbjct: 166 HPPPAPVWGPHGYMAPAPPPYDPYGAYPVPPVPMPAPAPVPAPSSYVPVQNTKDNP---- 221
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TLFI NLG N E+EL+ SV PGF +K+ + V F +FE++ A+ L
Sbjct: 222 PCNTLFIGNLGENINEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDMNTATNVHHSL 281
Query: 260 QDSTLPSSDRGGMHIEYARSKMRK 283
Q + +PSS GM I+Y+++ K
Sbjct: 282 QGAVIPSSGSVGMRIQYSKNPFGK 305
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
NTLF+ L +++ E+ LF +PGF Q+K + V F F + TA H L
Sbjct: 224 NTLFIGNLGENINEEELRGLFSVQPGFK--QMKILRQERHTVCFIEFEDMNTATNVHHSL 281
Query: 96 NGVKFDPQSGSV-LHIELARSNSRKKRKPG 124
G P SGSV + I+ +++ K++ G
Sbjct: 282 QGAVI-PSSGSVGMRIQYSKNPFGKRKDSG 310
>gi|356521751|ref|XP_003529515.1| PREDICTED: uncharacterized protein LOC100797865 [Glycine max]
Length = 320
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 121/263 (46%), Gaps = 16/263 (6%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+F++GLP+DV+ RE+ NL R PGF+ QL + + + + FA F A+AA
Sbjct: 38 VRTIFITGLPEDVKERELQNLLRWLPGFEASQLNF--KAEKPMGFALFSAPHQALAAKDI 95
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVI---DKRTKTEANVQESSSADGDS 151
L + FDP + SVLH E+A+ N KR G+ KR +T + S
Sbjct: 96 LQDMLFDPDTKSVLHTEMAKKNLFVKRGIGAADAGGAFDQSKRLRTAGDYTHSGYTSPSP 155
Query: 152 DTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEG-----GVQ------P 200
PV + A P+ + P VQ P
Sbjct: 156 FHPPPPPVWGPHGYMAPPPPPPPYDPYAGYPVAPVPMPTPAPIPAPSTYVPVQNTKDNPP 215
Query: 201 CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQ 260
C+TLFI NLG N E+E++ SV PGF +K+ + V F +FE+V A+ LQ
Sbjct: 216 CNTLFIGNLGENINEEEVRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNLQ 275
Query: 261 DSTLPSSDRGGMHIEYARSKMRK 283
+ +PSS GM I+Y+++ K
Sbjct: 276 GAVIPSSGSIGMRIQYSKNPFGK 298
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 16 PPPPPVPPP----PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTG 71
P P P+P P P + + + NTLF+ L +++ E+ LF +PGF Q+K
Sbjct: 193 PTPAPIPAPSTYVPVQNTKDNPPCNTLFIGNLGENINEEEVRGLFSVQPGFK--QMKILR 250
Query: 72 RGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSV-LHIELARSNSRKKRK 122
+ V F F + +A H L G P SGS+ + I+ ++ N KRK
Sbjct: 251 QERHTVCFIEFEDVNSATNVHHNLQGAVI-PSSGSIGMRIQYSK-NPFGKRK 300
>gi|224113311|ref|XP_002316452.1| predicted protein [Populus trichocarpa]
gi|222865492|gb|EEF02623.1| predicted protein [Populus trichocarpa]
Length = 281
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 120/256 (46%), Gaps = 21/256 (8%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+F++G PDDV+ RE+ NL R PG++ Q+ Y +G + + FA F Q A+AA
Sbjct: 1 VRTIFITGFPDDVKERELQNLLRWLPGYEASQVNY--KGEKAMGFALFSCAQHAIAAKDA 58
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRK--PGSGAYVVIDKRTKTEANVQESSSADGDSD 152
L + FD + SVLH E+A+ N KR S AY KR +T + ++
Sbjct: 59 LQDMVFDADTKSVLHTEMAKKNLFVKRGIVADSNAYDQ-SKRLRTGGDYSHTTYTSPSPF 117
Query: 153 TDE------------ASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQP 200
A P + V + ++ P+ + K P
Sbjct: 118 HPPPPVWGPHGYMTPAPPPYDPYGGYPVPQVPMPPPAPIPAPSSYVPVQNTKDNP----P 173
Query: 201 CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQ 260
C+TLFI NLG N EDEL+ SV PGF +K+ + V F +FE++ A+ LQ
Sbjct: 174 CNTLFIGNLGENINEDELRGLFSVQPGFKQMKVLRQERHTVCFIEFEDLNSATNVHHTLQ 233
Query: 261 DSTLPSSDRGGMHIEY 276
+ +PSS GM I+Y
Sbjct: 234 GAVIPSSGSVGMRIQY 249
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
NTLF+ L +++ E+ LF +PGF Q+K + V F F + +A H L
Sbjct: 175 NTLFIGNLGENINEDELRGLFSVQPGFK--QMKVLRQERHTVCFIEFEDLNSATNVHHTL 232
Query: 96 NGVKFDPQSGSV-LHIEL-ARSNSRKKRKPG 124
G P SGSV + I+ R N KRK G
Sbjct: 233 QGAVI-PSSGSVGMRIQYPFRFNPFGKRKDG 262
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 36/79 (45%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
T+FI + E EL+ L PG+ ++ +G + FA F + A A + LQD
Sbjct: 3 TIFITGFPDDVKERELQNLLRWLPGYEASQVNYKGEKAMGFALFSCAQHAIAAKDALQDM 62
Query: 263 TLPSSDRGGMHIEYARSKM 281
+ + +H E A+ +
Sbjct: 63 VFDADTKSVLHTEMAKKNL 81
>gi|298204782|emb|CBI25280.3| unnamed protein product [Vitis vinifera]
Length = 299
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 123/257 (47%), Gaps = 22/257 (8%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+F+SGLP+DV+ RE+ NL R PG++ Q+ + +G + FA F Q AVAA
Sbjct: 49 VRTIFISGLPEDVKERELQNLLRWLPGYEASQVNF--KGEHPMGFALFSTPQLAVAAKDA 106
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRK--PGSGAYVVIDKRTKTEANVQESSSADGDSD 152
L + FD +S SVLH E+A+ N KR S AY KR +T + + +
Sbjct: 107 LQEMVFDAESKSVLHTEMAKKNLFVKRGIVADSSAYDQ-SKRLRTGGDYTHTGYSSPSPF 165
Query: 153 TDEASPVRN-------------IDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQ 199
+PV A V + + ++ P+ + K
Sbjct: 166 HPPPAPVWGPHGYMAPAPPPYDPYGAYPVPPVPMPAPAPVPAPSSYVPVQNTKDNP---- 221
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TLFI NLG N E+EL+ SV PGF +K+ + V F +FE++ A+ L
Sbjct: 222 PCNTLFIGNLGENINEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDMNTATNVHHSL 281
Query: 260 QDSTLPSSDRGGMHIEY 276
Q + +PSS GM I+Y
Sbjct: 282 QGAVIPSSGSVGMRIQY 298
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
T+FI+ L + E EL+ L PG+ ++ +G P+ FA F + A A + LQ+
Sbjct: 51 TIFISGLPEDVKERELQNLLRWLPGYEASQVNFKGEHPMGFALFSTPQLAVAAKDALQEM 110
Query: 263 TLPSSDRGGMHIEYARSKM 281
+ + +H E A+ +
Sbjct: 111 VFDAESKSVLHTEMAKKNL 129
>gi|195996479|ref|XP_002108108.1| hypothetical protein TRIADDRAFT_52243 [Trichoplax adhaerens]
gi|190588884|gb|EDV28906.1| hypothetical protein TRIADDRAFT_52243 [Trichoplax adhaerens]
Length = 298
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 129/277 (46%), Gaps = 35/277 (12%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT----GRGNQV--VAFATFVNHQTA 88
+ TLFVSGLP DV+ R++H LFR PG+ LK + G GN+ VAFATF + A
Sbjct: 15 VRTLFVSGLPVDVKQRDLHLLFRGLPGYLDSILKTSTKQPGHGNKSGPVAFATFETRELA 74
Query: 89 VAALHELNGVKFDPQ-SGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSA 147
A L G +FDP + S L ++ A+SN++ R + + K T N+
Sbjct: 75 NEAKAILQGFQFDPDVTDSHLRVDFAKSNTKSYRSRHNSSNGQNVKNTIYNGNIPNKLEL 134
Query: 148 DGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNA----VAPINSEKPYEGG------ 197
+ A P+ S D T + + P +E P
Sbjct: 135 -----ANPAIPIYREHSISTIDLTPTYYQNIIPETYVNHIPIYPCPTEIPQPACHSAPPV 189
Query: 198 VQP------------CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMP-VAFA 244
+QP CSTLF+ANLG N T+ EL+ GF L+M + G P AF
Sbjct: 190 LQPHMQSFQQQLPQVCSTLFVANLGRNITDKELRDIFGRCVGFRRLRMHKKPGFPTTAFI 249
Query: 245 DFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
+F ++ A+ A+ LQ + + SS+ GG+ IEYAR KM
Sbjct: 250 EFANIQFATQALNALQGAIIQSSECGGIRIEYARKKM 286
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 14/115 (12%)
Query: 13 PIHPPPPPVPPPPYH-------------HQQQDNGINTLFVSGLPDDVRAREIHNLFRRK 59
PI+P P +P P H QQ +TLFV+ L ++ +E+ ++F R
Sbjct: 170 PIYPCPTEIPQPACHSAPPVLQPHMQSFQQQLPQVCSTLFVANLGRNITDKELRDIFGRC 229
Query: 60 PGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELAR 114
GF ++ + G AF F N Q A AL+ L G + IE AR
Sbjct: 230 VGFRRLRM-HKKPGFPTTAFIEFANIQFATQALNALQGAIIQSSECGGIRIEYAR 283
>gi|357467715|ref|XP_003604142.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355505197|gb|AES86339.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 311
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 14/250 (5%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+F++GLP+DV+ RE+ NL R PGF+ QL + + + + FA F + A+AA
Sbjct: 35 VRTIFITGLPEDVKERELQNLCRWLPGFEASQLNF--KAEKPMGFALFNSPHQAIAAKDI 92
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVID--KRTKTEANVQESSSADGDSD 152
L + FDP++ SVLH E+A+ N KR G+ A V D KR +T + +
Sbjct: 93 LQDMLFDPEAKSVLHTEMAKKNLFVKRGIGADA-VAFDQSKRLRTAGDYNHTGYVTPSPF 151
Query: 153 TDEASPVRNIDSADKGDFVTTQSERATDSGNAV---APINSEKPYEGGVQ------PCST 203
PV A V AP++ +Q PC+T
Sbjct: 152 HPPPPPVWGPHGYMAPPPPPPYDPYAGYPVAQVPMPAPVSIAPSSYVPIQNTKDNPPCNT 211
Query: 204 LFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDST 263
LFI NLG N E+E++ SV PGF +K+ + V F +FE+V A+ LQ +
Sbjct: 212 LFIGNLGENINEEEVRGLFSVQPGFKQMKIIRQERHTVCFIEFEDVNSATNVHHNLQGAV 271
Query: 264 LPSSDRGGMH 273
+PSS G++
Sbjct: 272 IPSSGSIGIY 281
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
NTLF+ L +++ E+ LF +PGF Q+K + V F F + +A H L
Sbjct: 210 NTLFIGNLGENINEEEVRGLFSVQPGFK--QMKIIRQERHTVCFIEFEDVNSATNVHHNL 267
Query: 96 NGVKFDPQSGSVLHIELARSNSRKKRKPGS 125
G P SGS I + N KRK G+
Sbjct: 268 QGAVI-PSSGS---IGIYSKNPFGKRKDGT 293
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 35/79 (44%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
T+FI L + E EL+ PGF ++ + P+ FA F QA A + LQD
Sbjct: 37 TIFITGLPEDVKERELQNLCRWLPGFEASQLNFKAEKPMGFALFNSPHQAIAAKDILQDM 96
Query: 263 TLPSSDRGGMHIEYARSKM 281
+ +H E A+ +
Sbjct: 97 LFDPEAKSVLHTEMAKKNL 115
>gi|168054248|ref|XP_001779544.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669025|gb|EDQ55620.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 268
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 115/259 (44%), Gaps = 25/259 (9%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+FV G P DV+ RE+ NL R PG++ Q+ + + +Q + FA F A+AA
Sbjct: 3 VRTIFVLGFPSDVKERELQNLLRWWPGYEASQMNF--KCDQPMGFALFSTVAMAMAARDA 60
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDS--- 151
L + FD + SVL E+A+ N KR + D + + S A +
Sbjct: 61 LQNLVFDADTNSVLRAEMAKKNLFVKRGVAGDPCISFDGSKRMRTGGGDYSPAPYSAPYP 120
Query: 152 DTDEASPVRNIDSA--------------DKGDFVTTQSERATDSGNAVAPINSEKPYEGG 197
T P+ + A G +V Q T SG A + P
Sbjct: 121 STYLTQPMTSPTPAWAPQTYGLPQPQYDQYGAYVAPQPLPITPSGYAPVQNTKDNP---- 176
Query: 198 VQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAME 257
PC+TLFI NLG E EL+ S GF +K+ +G V F +F +V A +
Sbjct: 177 --PCNTLFIGNLGEAVNEIELRALFSGQLGFRQMKVLRQGKNIVCFIEFLDVNSAMLVHT 234
Query: 258 GLQDSTLPSSDRGGMHIEY 276
LQ + L +SDRGGM I+Y
Sbjct: 235 NLQGAVLSTSDRGGMRIQY 253
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 35/79 (44%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
T+F+ + E EL+ L +PG+ +M + P+ FA F V A A + LQ+
Sbjct: 5 TIFVLGFPSDVKERELQNLLRWWPGYEASQMNFKCDQPMGFALFSTVAMAMAARDALQNL 64
Query: 263 TLPSSDRGGMHIEYARSKM 281
+ + E A+ +
Sbjct: 65 VFDADTNSVLRAEMAKKNL 83
>gi|357467717|ref|XP_003604143.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355505198|gb|AES86340.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 309
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 118/248 (47%), Gaps = 12/248 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+F++GLP+DV+ RE+ NL R PGF+ QL + + + + FA F + A+AA
Sbjct: 35 VRTIFITGLPEDVKERELQNLCRWLPGFEASQLNF--KAEKPMGFALFNSPHQAIAAKDI 92
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTD 154
L + FDP++ SVLH E+A+ N KR + A+ KR +T + +
Sbjct: 93 LQDMLFDPEAKSVLHTEMAKKNLFVKRGADAVAFDQ-SKRLRTAGDYNHTGYVTPSPFHP 151
Query: 155 EASPVRNIDSADKGDFVTTQSERATDSGNAV---APINSEKPYEGGVQ------PCSTLF 205
PV A V AP++ +Q PC+TLF
Sbjct: 152 PPPPVWGPHGYMAPPPPPPYDPYAGYPVAQVPMPAPVSIAPSSYVPIQNTKDNPPCNTLF 211
Query: 206 IANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLP 265
I NLG N E+E++ SV PGF +K+ + V F +FE+V A+ LQ + +P
Sbjct: 212 IGNLGENINEEEVRGLFSVQPGFKQMKIIRQERHTVCFIEFEDVNSATNVHHNLQGAVIP 271
Query: 266 SSDRGGMH 273
SS G++
Sbjct: 272 SSGSIGIY 279
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
NTLF+ L +++ E+ LF +PGF Q+K + V F F + +A H L
Sbjct: 208 NTLFIGNLGENINEEEVRGLFSVQPGFK--QMKIIRQERHTVCFIEFEDVNSATNVHHNL 265
Query: 96 NGVKFDPQSGSVLHIELARSNSRKKRKPGS 125
G P SGS I + N KRK G+
Sbjct: 266 QGAVI-PSSGS---IGIYSKNPFGKRKDGT 291
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 35/79 (44%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
T+FI L + E EL+ PGF ++ + P+ FA F QA A + LQD
Sbjct: 37 TIFITGLPEDVKERELQNLCRWLPGFEASQLNFKAEKPMGFALFNSPHQAIAAKDILQDM 96
Query: 263 TLPSSDRGGMHIEYARSKM 281
+ +H E A+ +
Sbjct: 97 LFDPEAKSVLHTEMAKKNL 115
>gi|198423670|ref|XP_002129832.1| PREDICTED: similar to MEChanosensory abnormality family member
(mec-8) [Ciona intestinalis]
Length = 359
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 125/276 (45%), Gaps = 37/276 (13%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ ++ T + + V F TF + A A
Sbjct: 81 VRTLFVSGLPADAKKRELYLLFRGFTGYEGSIIRTTAKPGKAPVPVGFVTFDSRGEADLA 140
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDS 151
+ L G+KFDP+ L +E A++N++ K +P S A + + Q+ SA+
Sbjct: 141 KNSLQGIKFDPELPHTLRLEFAKANTKVKLRPSSPAQELANHIIGYLP--QQFGSANLLP 198
Query: 152 DTDEASPVRNIDSADKGDFVTTQSE-------RATDSGNAVAPINSEKP----------- 193
P + +G F T S + T + + +API+ +P
Sbjct: 199 AEIFGQPYSSYPELLQG-FQTHPSVTQVGAPLQVTPALHHIAPIHPAQPPPHGAIFTHLA 257
Query: 194 -----------YEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVA 242
G P S L + N+G TE ELK S + G+ K+ RGGM A
Sbjct: 258 GAPMMNLALGQANGTTAPTSCLLVCNIGGGTTEKELKDIFSRFHGYVRAKLINRGGMLCA 317
Query: 243 FADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYAR 278
+F + AS A+ LQ + L +DR M IE+AR
Sbjct: 318 VVEFTDAGTASYALHSLQGTRL--NDRSAMRIEFAR 351
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 18/120 (15%)
Query: 9 YYLPPIHPPPPPVPPPPYHHQQ----------QDNGI----NTLFVSGLPDDVRAREIHN 54
+++ PIHP PP + H Q NG + L V + +E+ +
Sbjct: 236 HHIAPIHPAQPPPHGAIFTHLAGAPMMNLALGQANGTTAPTSCLLVCNIGGGTTEKELKD 295
Query: 55 LFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELAR 114
+F R G+ + K RG + A F + TA ALH L G + + + S + IE AR
Sbjct: 296 IFSRFHGY--VRAKLINRGGMLCAVVEFTDAGTASYALHSLQGTRLNDR--SAMRIEFAR 351
>gi|380018457|ref|XP_003693144.1| PREDICTED: protein couch potato-like [Apis florea]
Length = 331
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 61/85 (71%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PCSTLF+ANLG +E ELK S +PGF+ L+M +GG PVAF ++++V A+ AM L
Sbjct: 224 PCSTLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTKGGSPVAFVEYQDVRYAAQAMATL 283
Query: 260 QDSTLPSSDRGGMHIEYARSKMRKL 284
Q S L SSDRG + IEYA+SKM ++
Sbjct: 284 QGSFLLSSDRGAIRIEYAKSKMAEV 308
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 32 DNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTA 88
++ + TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A
Sbjct: 19 EDEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGA 78
Query: 89 VAALHEL-NGVKFDPQSGSVLHIELARSNSRKKR 121
AA +L GV+FDP + +E A+SN++ +
Sbjct: 79 EAAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 112
Score = 37.0 bits (84), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
+TLFV+ L V E+ ++F PGF +L+ +G VAF + + + A A+ L
Sbjct: 226 STLFVANLGQFVSEHELKDIFSSFPGFS--RLRMHTKGGSPVAFVEYQDVRYAAQAMATL 283
Query: 96 NGVKFDPQSGSVLHIELARSN 116
G + IE A+S
Sbjct: 284 QGSFLLSSDRGAIRIEYAKSK 304
>gi|328789046|ref|XP_392443.4| PREDICTED: protein couch potato-like [Apis mellifera]
gi|350408751|ref|XP_003488500.1| PREDICTED: protein couch potato-like [Bombus impatiens]
Length = 326
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 61/85 (71%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PCSTLF+ANLG +E ELK S +PGF+ L+M +GG PVAF ++++V A+ AM L
Sbjct: 224 PCSTLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTKGGSPVAFVEYQDVRYAAQAMATL 283
Query: 260 QDSTLPSSDRGGMHIEYARSKMRKL 284
Q S L SSDRG + IEYA+SKM ++
Sbjct: 284 QGSFLLSSDRGAIRIEYAKSKMAEV 308
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 32 DNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTA 88
++ + TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A
Sbjct: 19 EDEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGA 78
Query: 89 VAALHEL-NGVKFDPQSGSVLHIELARSNSRKKR 121
AA +L GV+FDP + +E A+SN++ +
Sbjct: 79 EAAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 112
Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
+TLFV+ L V E+ ++F PG F +L+ +G VAF + + + A A+ L
Sbjct: 226 STLFVANLGQFVSEHELKDIFSSFPG--FSRLRMHTKGGSPVAFVEYQDVRYAAQAMATL 283
Query: 96 NGVKFDPQSGSVLHIELARSN 116
G + IE A+S
Sbjct: 284 QGSFLLSSDRGAIRIEYAKSK 304
>gi|383858263|ref|XP_003704621.1| PREDICTED: protein couch potato-like [Megachile rotundata]
Length = 334
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 61/85 (71%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PCSTLF+ANLG +E ELK S +PGF+ L+M +GG PVAF ++++V A+ AM L
Sbjct: 217 PCSTLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTKGGSPVAFVEYQDVRYAAQAMATL 276
Query: 260 QDSTLPSSDRGGMHIEYARSKMRKL 284
Q S L SSDRG + IEYA+SKM ++
Sbjct: 277 QGSFLLSSDRGAIRIEYAKSKMAEV 301
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 15 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 74
Query: 92 LHEL-NGVKFDPQSGSVLHIELARSNSR 118
+L GV+FDP + +E A+SN++
Sbjct: 75 KQDLQQGVRFDPDMPQTIRLEFAKSNTK 102
>gi|340716150|ref|XP_003396564.1| PREDICTED: protein couch potato-like [Bombus terrestris]
Length = 315
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 61/85 (71%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PCSTLF+ANLG +E ELK S +PGF+ L+M +GG PVAF ++++V A+ AM L
Sbjct: 213 PCSTLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTKGGSPVAFVEYQDVRYAAQAMATL 272
Query: 260 QDSTLPSSDRGGMHIEYARSKMRKL 284
Q S L SSDRG + IEYA+SKM ++
Sbjct: 273 QGSFLLSSDRGAIRIEYAKSKMAEV 297
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 32 DNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
++ + TLFVSGLP D + RE++ LFR G++ LK T + + + + + A
Sbjct: 19 EDEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASVSHYFFKLPA--- 75
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKR 121
GV+FDP + +E A+SN++ +
Sbjct: 76 ----QGVRFDPDMPQTIRLEFAKSNTKVSK 101
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
+TLFV+ L V E+ ++F PGF +L+ +G VAF + + + A A+ L
Sbjct: 215 STLFVANLGQFVSEHELKDIFSSFPGFS--RLRMHTKGGSPVAFVEYQDVRYAAQAMATL 272
Query: 96 NGVKFDPQSGSVLHIELARSN 116
G + IE A+S
Sbjct: 273 QGSFLLSSDRGAIRIEYAKSK 293
>gi|345485970|ref|XP_001605039.2| PREDICTED: protein couch potato-like [Nasonia vitripennis]
Length = 327
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 61/85 (71%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PCSTLF+ANLG +E ELK+ + +PGF L+M +GG PVAF ++++V A+ AM L
Sbjct: 225 PCSTLFVANLGQFVSEHELKEIFNSFPGFCRLRMHTKGGSPVAFVEYQDVRYAAQAMATL 284
Query: 260 QDSTLPSSDRGGMHIEYARSKMRKL 284
Q S L SSDRG + IEYA+SKM ++
Sbjct: 285 QGSLLVSSDRGAIRIEYAKSKMAEV 309
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 32 DNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTA 88
++ + TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A
Sbjct: 19 EDEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTNKNGKTASPVGFVTFHTRSEA 78
Query: 89 VAALHEL-NGVKFDPQSGSVLHIELARSNSRKKR 121
AA H+L GV+FDP + +E A+SN++ +
Sbjct: 79 EAAKHDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 112
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
+TLFV+ L V E+ +F PGF C+L+ +G VAF + + + A A+ L
Sbjct: 227 STLFVANLGQFVSEHELKEIFNSFPGF--CRLRMHTKGGSPVAFVEYQDVRYAAQAMATL 284
Query: 96 NGVKFDPQSGSVLHIELARSN 116
G + IE A+S
Sbjct: 285 QGSLLVSSDRGAIRIEYAKSK 305
>gi|307202627|gb|EFN81948.1| Protein couch potato [Harpegnathos saltator]
Length = 189
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 64/95 (67%)
Query: 190 SEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEV 249
S +P G CSTLF+ANLG +E ELK S +PGF+ L+M +GG PVAF ++++V
Sbjct: 79 SSQPNIAGNAQCSTLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTKGGSPVAFIEYQDV 138
Query: 250 EQASIAMEGLQDSTLPSSDRGGMHIEYARSKMRKL 284
A+ AM LQ S L SSDRG + IEYA+SKM ++
Sbjct: 139 RYAAQAMATLQGSFLLSSDRGAIRIEYAKSKMAEV 173
>gi|393910177|gb|EFO19018.2| hypothetical protein LOAG_09478 [Loa loa]
Length = 395
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 184 AVAPINSEKPYEGGVQP-CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVA 242
AV N+ V P CSTLF+ANLG TEDELK YPGF L++ R VA
Sbjct: 291 AVTSANAVTKATAAVSPACSTLFVANLGDGITEDELKAVFCAYPGFTRLRLHTRNDTTVA 350
Query: 243 FADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
F +F +V QA++ M LQ + SS RGG+ IEYAR++M
Sbjct: 351 FVEFRDVRQATLVMNALQGCRISSSHRGGIRIEYARNRM 389
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT----GRGNQVVAFATFVNHQTAVA 90
+ TLFVSGLP D + RE++ LFR G++ L+ T G V F TF + + A
Sbjct: 38 VRTLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSKDGGIASPVGFVTFSSAEDADI 97
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSR 118
A+ L V FDP +G + +E A+SN++
Sbjct: 98 AMKTLQSVLFDPTTGHKIRLEKAKSNTK 125
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 7/124 (5%)
Query: 166 DKGDFVTTQSERATDSGNAVAPINSE-KPYEGGVQPCSTLFIANLGPNCTEDELKQTLSV 224
+ G T+S + +SGN + +++ P G +P TLF++ L + + EL
Sbjct: 2 ENGKLAGTESLESIESGNTSSALSTRIVPNVAGSEPVRTLFVSGLPMDAKQRELYLLFRS 61
Query: 225 YPGFNMLKMRAR----GGM--PVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYAR 278
G+ +R GG+ PV F F E A IAM+ LQ + + +E A+
Sbjct: 62 CRGYENSLLRITQSKDGGIASPVGFVTFSSAEDADIAMKTLQSVLFDPTTGHKIRLEKAK 121
Query: 279 SKMR 282
S +
Sbjct: 122 SNTK 125
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 34 GINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALH 93
+TLFV+ L D + E+ +F PGF +L+ R + VAF F + + A ++
Sbjct: 308 ACSTLFVANLGDGITEDELKAVFCAYPGFT--RLRLHTRNDTTVAFVEFRDVRQATLVMN 365
Query: 94 ELNGVKFDPQSGSVLHIELAR 114
L G + + IE AR
Sbjct: 366 ALQGCRISSSHRGGIRIEYAR 386
>gi|312086378|ref|XP_003145052.1| hypothetical protein LOAG_09478 [Loa loa]
Length = 396
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 184 AVAPINSEKPYEGGVQP-CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVA 242
AV N+ V P CSTLF+ANLG TEDELK YPGF L++ R VA
Sbjct: 291 AVTSANAVTKATAAVSPACSTLFVANLGDGITEDELKAVFCAYPGFTRLRLHTRNDTTVA 350
Query: 243 FADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
F +F +V QA++ M LQ + SS RGG+ IEYAR++M
Sbjct: 351 FVEFRDVRQATLVMNALQGCRISSSHRGGIRIEYARNRM 389
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT----GRGNQVVAFATFVNHQTAVA 90
+ TLFVSGLP D + RE++ LFR G++ L+ T G V F TF + + A
Sbjct: 38 VRTLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSKDGGIASPVGFVTFSSAEDADI 97
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSR 118
A+ L V FDP +G + +E A+SN++
Sbjct: 98 AMKTLQSVLFDPTTGHKIRLEKAKSNTK 125
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 7/124 (5%)
Query: 166 DKGDFVTTQSERATDSGNAVAPINSE-KPYEGGVQPCSTLFIANLGPNCTEDELKQTLSV 224
+ G T+S + +SGN + +++ P G +P TLF++ L + + EL
Sbjct: 2 ENGKLAGTESLESIESGNTSSALSTRIVPNVAGSEPVRTLFVSGLPMDAKQRELYLLFRS 61
Query: 225 YPGFNMLKMRAR----GGM--PVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYAR 278
G+ +R GG+ PV F F E A IAM+ LQ + + +E A+
Sbjct: 62 CRGYENSLLRITQSKDGGIASPVGFVTFSSAEDADIAMKTLQSVLFDPTTGHKIRLEKAK 121
Query: 279 SKMR 282
S +
Sbjct: 122 SNTK 125
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 34 GINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALH 93
+TLFV+ L D + E+ +F PGF +L+ R + VAF F + + A ++
Sbjct: 308 ACSTLFVANLGDGITEDELKAVFCAYPGFT--RLRLHTRNDTTVAFVEFRDVRQATLVMN 365
Query: 94 ELNGVKFDPQSGSVLHIELAR 114
L G + + IE AR
Sbjct: 366 ALQGCRISSSHRGGIRIEYAR 386
>gi|307184926|gb|EFN71193.1| Protein couch potato [Camponotus floridanus]
Length = 358
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 58/81 (71%)
Query: 201 CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQ 260
CSTLF+ANLG +E ELK S +PGF+ L+M +GG PVAF ++++V A+ AM LQ
Sbjct: 194 CSTLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTKGGSPVAFVEYQDVRYAAQAMATLQ 253
Query: 261 DSTLPSSDRGGMHIEYARSKM 281
S L SSDRG + IEYA+SKM
Sbjct: 254 GSFLLSSDRGAIRIEYAKSKM 274
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 46 DVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAALHEL-NGVKFD 101
D + RE++ LFR G++ LK T + + V F TF A AA +L GV+FD
Sbjct: 2 DTKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAAKQDLQQGVRFD 61
Query: 102 PQSGSVLHIELARSNSR 118
P + +E A+SN++
Sbjct: 62 PDMPQTIRLEFAKSNTK 78
>gi|307110907|gb|EFN59142.1| hypothetical protein CHLNCDRAFT_19159, partial [Chlorella
variabilis]
Length = 382
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 119/261 (45%), Gaps = 25/261 (9%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+F+SG P+DVR RE++N+ R PG++ Q+ + R Q FA F + A AA+
Sbjct: 4 VRTVFISGFPEDVRERELNNMLRFLPGYEASQMHF--RNGQAQGFALFASGSLARAAVDA 61
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKP----GSGA---------YVVIDKRTKTEANV 141
+ + FD + VL E+A N +R+ G GA Y+ + +
Sbjct: 62 IQNLVFD--NDCVLRAEMAHKNMCARRRGAACRGPGAAPHDRAAADYLQTHRSRPSSYEA 119
Query: 142 QESSSADGDSDTDEASPVRNIDSADKG--DFVTTQSERATDSGNAVAPINSEKPYEGGVQ 199
Q S G +P + G API++ K
Sbjct: 120 QPPPSYGGYQPAAAPAPAPFAHAGYGGLAAAPAAVVAVQPVQPRGYAPISNTKDNP---- 175
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
PC+TLFI NLG + +E E++ PGF LK+ R + GM F ++ ++ A +
Sbjct: 176 PCNTLFIGNLGDSVSEAEMRGLFGHQPGFQQLKLVRGQKGMSC-FIEYADIPTAMAVHDA 234
Query: 259 LQDSTLPSSDRGGMHIEYARS 279
Q + L SSDRGG+ I+Y+++
Sbjct: 235 QQGAILSSSDRGGIRIQYSKN 255
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
NTLF+ L D V E+ LF +PGF QLK + F + + TA+A
Sbjct: 177 CNTLFIGNLGDSVSEAEMRGLFGHQPGFQ--QLKLVRGQKGMSCFIEYADIPTAMAVHDA 234
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYV 129
G + I+ +++ +KR +GA+V
Sbjct: 235 QQGAILSSSDRGGIRIQYSKNPFGRKRD-AAGAFV 268
>gi|405952772|gb|EKC20544.1| Protein couch potato [Crassostrea gigas]
Length = 318
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 59/82 (71%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PCSTLF+ANLG +E ELK + + GF+ L+M +GG PVAF +F++V QA+ AM L
Sbjct: 215 PCSTLFVANLGQFSSEQELKDLFNSFQGFSRLRMHNKGGSPVAFVEFQDVRQAAEAMGRL 274
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
Q L SSDRGG+ IEYA++KM
Sbjct: 275 QGFVLLSSDRGGIRIEYAKNKM 296
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 46 DVRAREIHNLFRRKPGFDFCQLKYT---GRGNQVVAFATFVNHQTAVAALHELNGVKFDP 102
D + RE++ LFR G++ LK T G+ V F TF + A AA +L GV+FDP
Sbjct: 2 DAKPRELYLLFRAYKGYEGSLLKVTNKNGKNTSPVGFVTFSSRSAAEAAKQDLQGVRFDP 61
Query: 103 QSGSVLHIELARSNSR 118
L +E A+SN++
Sbjct: 62 DLPQTLRLEFAKSNTK 77
>gi|170583984|ref|XP_001896809.1| RNA binding protein [Brugia malayi]
gi|158595852|gb|EDP34335.1| RNA binding protein, putative [Brugia malayi]
Length = 367
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 53/81 (65%)
Query: 201 CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQ 260
CSTLF+ANLG TEDELK YPGF L++ R VAF +F +V QA++ M LQ
Sbjct: 280 CSTLFVANLGDGVTEDELKAVFCAYPGFTRLRLHTRNDTTVAFVEFRDVRQATLVMNALQ 339
Query: 261 DSTLPSSDRGGMHIEYARSKM 281
+ SS RGG+ IEYAR++M
Sbjct: 340 GCRISSSHRGGIRIEYARNRM 360
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT----GRGNQVVAFATFVNHQTAVA 90
+ TLFVSGLP D + RE++ LFR G++ L+ T G V F TF + + A
Sbjct: 38 VRTLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSKDGGIASPVGFVTFSSAEDAEI 97
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSR 118
A+ L FDP +G + +E A+SN++
Sbjct: 98 AMKALQSALFDPITGHKIRLEKAKSNTK 125
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
+TLFV+ L D V E+ +F PGF +L+ R + VAF F + + A ++ L
Sbjct: 281 STLFVANLGDGVTEDELKAVFCAYPGFT--RLRLHTRNDTTVAFVEFRDVRQATLVMNAL 338
Query: 96 NGVKFDPQSGSVLHIELARS 115
G + + IE AR+
Sbjct: 339 QGCRISSSHRGGIRIEYARN 358
>gi|427782383|gb|JAA56643.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 326
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 57/82 (69%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PCSTLF+ANLG +E ELK +PGF L+M +GG PVAF ++++V A+ AM L
Sbjct: 239 PCSTLFVANLGQFVSEQELKDLFGSFPGFCRLRMHNKGGAPVAFVEYQDVRLATHAMNAL 298
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
Q L SSDRGG+ IE+A++KM
Sbjct: 299 QGCVLFSSDRGGVRIEFAKNKM 320
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 8/101 (7%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT---GRGNQVVAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T G+ + V F TF + A AA
Sbjct: 27 VRTLFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTQKNGKTSSPVGFVTFSSRAGAEAA 86
Query: 92 LHEL-NGVKFDPQSGSVLHIELARSNSR----KKRKPGSGA 127
EL GV+FDP + +E A+SN++ K++ P + A
Sbjct: 87 KQELQQGVRFDPDLPQTIRLEFAKSNTKVSKPKQQSPPAAA 127
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
+TLFV+ L V +E+ +LF PGF C+L+ +G VAF + + + A A++ L
Sbjct: 241 STLFVANLGQFVSEQELKDLFGSFPGF--CRLRMHNKGGAPVAFVEYQDVRLATHAMNAL 298
Query: 96 NG-VKFDPQSGSVLHIELARSN 116
G V F G V IE A++
Sbjct: 299 QGCVLFSSDRGGV-RIEFAKNK 319
>gi|270002453|gb|EEZ98900.1| hypothetical protein TcasGA2_TC004515 [Tribolium castaneum]
Length = 296
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 58/82 (70%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PCSTLF+ANLG +E ELK+ + +PGF L+M +GG PVAF ++++V A+ M L
Sbjct: 195 PCSTLFVANLGQFVSEHELKEIFASFPGFCRLRMHNKGGSPVAFMEYQDVRCAAQVMAAL 254
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
Q S L SSDRG + IEYA+SKM
Sbjct: 255 QGSFLLSSDRGPIRIEYAKSKM 276
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 46 DVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAALHEL-NGVKFD 101
D + RE++ LFR G++ LK T + + V F TF A AA +L GV+FD
Sbjct: 2 DAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFNTRAGAEAAKQDLQQGVRFD 61
Query: 102 PQSGSVLHIELARSNSRKKR 121
P + +E A+SN++ +
Sbjct: 62 PDMPQTIRLEFAKSNTKVSK 81
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
+TLFV+ L V E+ +F PGF C+L+ +G VAF + + + A + L
Sbjct: 197 STLFVANLGQFVSEHELKEIFASFPGF--CRLRMHNKGGSPVAFMEYQDVRCAAQVMAAL 254
Query: 96 NGVKFDPQSGSVLHIELARSN 116
G + IE A+S
Sbjct: 255 QGSFLLSSDRGPIRIEYAKSK 275
>gi|321469536|gb|EFX80516.1| hypothetical protein DAPPUDRAFT_23478 [Daphnia pulex]
Length = 270
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 59/86 (68%)
Query: 196 GGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIA 255
G PCSTLF+ANLG +E ELK+ +PG+ L+M +GG PVAF ++ +V A+ A
Sbjct: 180 GANAPCSTLFVANLGQFVSEQELKELFGSFPGYCRLRMHNKGGAPVAFVEYADVRCAAQA 239
Query: 256 MEGLQDSTLPSSDRGGMHIEYARSKM 281
+ LQ + L SSDRGG+ IEYAR+KM
Sbjct: 240 LISLQGTYLLSSDRGGVRIEYARNKM 265
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT---GRGNQVVAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ QLK T G+ V F TF +A A
Sbjct: 2 VRTLFVSGLPMDAKPRELYLLFRAYDGYENSQLKVTSKNGKTTSPVGFVTFATRASAEGA 61
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSR 118
+L GV+FDP + +E A+SN++
Sbjct: 62 KQDLQGVRFDPDIPQTIRLEFAKSNTK 88
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+TLFV+ L V +E+ LF PG+ C+L+ +G VAF + + + A AL
Sbjct: 185 CSTLFVANLGQFVSEQELKELFGSFPGY--CRLRMHNKGGAPVAFVEYADVRCAAQALIS 242
Query: 95 LNGVKFDPQSGSVLHIELARS 115
L G + IE AR+
Sbjct: 243 LQGTYLLSSDRGGVRIEYARN 263
>gi|2673920|gb|AAB88654.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 158
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFV+GLP+DV+ REI+NLFR PG++ L+ + G + AFA F + Q+AVA +H
Sbjct: 34 VRTLFVAGLPEDVKPREIYNLFREFPGYETSHLR-SSDGAKPFAFAVFSDLQSAVAVMHA 92
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG+ FD + S LHI+LA+SN + KR
Sbjct: 93 LNGMVFDLEKHSTLHIDLAKSNPKSKR 119
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Query: 196 GGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-GGMPVAFADFEEVEQASI 254
G TLF+A L + E+ +PG+ +R+ G P AFA F +++ A
Sbjct: 29 GARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSDGAKPFAFAVFSDLQSAVA 88
Query: 255 AMEGLQDSTLPSSDRGGMHIEYARS 279
M L +HI+ A+S
Sbjct: 89 VMHALNGMVFDLEKHSTLHIDLAKS 113
>gi|125560763|gb|EAZ06211.1| hypothetical protein OsI_28451 [Oryza sativa Indica Group]
Length = 215
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 97/214 (45%), Gaps = 18/214 (8%)
Query: 77 VAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVV-IDKRT 135
+ FA F + A+AA L + FD ++ + LH E+A+ N KR G+ A + KR
Sbjct: 1 MGFALFSSAHHAIAAKSALQDLVFDAETKTALHTEMAKKNLFVKRGVGNDANAMDQSKRL 60
Query: 136 KTEANVQESS-------------SADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSG 182
+T + S S G A P N +A V S
Sbjct: 61 RTGGDYTHSPYAAPPYHPPPPAVSMWGTPGYIAAPPPYNHYAAYSVPPVAMTSPSPVPGP 120
Query: 183 NAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVA 242
A AP+ + K PC+TLFI NLG E+EL+ SV PG+ +K+ + V
Sbjct: 121 TAYAPVQNTKDNP----PCNTLFIGNLGETVIEEELRSLFSVQPGYKQMKVLRQDRNTVC 176
Query: 243 FADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEY 276
F +FE+V AS LQ + +PSS RGGM I+Y
Sbjct: 177 FIEFEDVNAASAVHHNLQGAVIPSSGRGGMRIQY 210
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 2 AHPPYD---PYYLPPI-HPPPPPVPPP----PYHHQQQDNGINTLFVSGLPDDVRAREIH 53
A PPY+ Y +PP+ P PVP P P + + + NTLF+ L + V E+
Sbjct: 94 APPPYNHYAAYSVPPVAMTSPSPVPGPTAYAPVQNTKDNPPCNTLFIGNLGETVIEEELR 153
Query: 54 NLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSG 105
+LF +PG+ Q+K + V F F + A A H L G P SG
Sbjct: 154 SLFSVQPGYK--QMKVLRQDRNTVCFIEFEDVNAASAVHHNLQGAVI-PSSG 202
>gi|384253459|gb|EIE26934.1| hypothetical protein COCSUDRAFT_12206, partial [Coccomyxa
subellipsoidea C-169]
Length = 253
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 30/246 (12%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+FV+G P DV+ RE++N+ R G++ Q+ + + FA F + + A A+
Sbjct: 3 VRTVFVTGFPADVKERELNNMLRFVHGYEASQMHW--KNGLAQGFALFTHGEAARMAISS 60
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTD 154
++ + FD G++L E+AR N K + KR + E + ++ + S
Sbjct: 61 IHNLVFD--DGAILRCEMARKNMYIKDDAAAA------KRGRMEYSPYPAAPSPAPSGGA 112
Query: 155 EASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCT 214
+ + + P+N+ K PC+TLFI NL N
Sbjct: 113 YYA--------------PAPASAPVQPPRSYVPVNNTKDNP----PCNTLFIGNLSENTN 154
Query: 215 EDELKQTLSVYPGFNMLKMRARGGMPV-AFADFEEVEQASIAMEGLQDSTLPSSDRGGMH 273
EDEL+ PGF LK+ RG V F +F +V A + Q + L +SDRGG+
Sbjct: 155 EDELRGLFVGQPGFRQLKL-VRGARSVTCFVEFSDVASAMGVHQSQQGAVLSTSDRGGIR 213
Query: 274 IEYARS 279
I+Y+++
Sbjct: 214 IQYSKN 219
>gi|302834225|ref|XP_002948675.1| hypothetical protein VOLCADRAFT_104008 [Volvox carteri f.
nagariensis]
gi|300265866|gb|EFJ50055.1| hypothetical protein VOLCADRAFT_104008 [Volvox carteri f.
nagariensis]
Length = 332
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 112/245 (45%), Gaps = 25/245 (10%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+FV+G P DV+ RE++NL R PG++ Q+ Y+ Q FA F A AA +
Sbjct: 65 VRTIFVTGFPADVKERELNNLLRFLPGYEASQMNYSKGAAQ--GFALFNTGAMARAACDQ 122
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTD 154
L V+FD S L E+AR N + + +KR++ A G +
Sbjct: 123 LQHVRFD--ENSSLRCEMARKNMYIRD-------MEPNKRSRPNAPQAGGFGGPGPAGAA 173
Query: 155 EASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCT 214
A+P A G + + D G+ + P PC+TLF+ NL
Sbjct: 174 GAAPAFGRPQASYG---SAGARSGGDGGS-----RDDNP------PCNTLFVGNLSETVD 219
Query: 215 EDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHI 274
E+EL+ PGF LK+ + F +F++V A A Q + L SSDRG + +
Sbjct: 220 ENELRNLFGGAPGFRQLKLMRGPKATLGFVEFDDVPTAMAAHAAQQGAVLASSDRGPIRV 279
Query: 275 EYARS 279
+Y+++
Sbjct: 280 QYSKN 284
>gi|115469616|ref|NP_001058407.1| Os06g0687500 [Oryza sativa Japonica Group]
gi|52077025|dbj|BAD46058.1| RNA-binding protein-like [Oryza sativa Japonica Group]
gi|113596447|dbj|BAF20321.1| Os06g0687500 [Oryza sativa Japonica Group]
gi|215692539|dbj|BAG87959.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 219
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 60/87 (68%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLF++GLP D +ARE++NLFR PG+ L+ +G+ +Q AFA F + +A+AA+
Sbjct: 68 LRTLFIAGLPGDAKAREVYNLFRDFPGYVSSHLRTSGKSSQAYAFAVFADQPSALAAMSA 127
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
NG FD ++ LH++LA+SNSR KR
Sbjct: 128 TNGRIFDLENNCTLHVDLAKSNSRSKR 154
>gi|115894424|ref|XP_001198644.1| PREDICTED: cell wall integrity protein scw1-like
[Strongylocentrotus purpuratus]
Length = 154
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 55/83 (66%)
Query: 201 CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQ 260
CSTLF+ANLG N +E EL+ TL PGFN L+M +GG P F +F+ V A A+ LQ
Sbjct: 46 CSTLFLANLGTNTSEQELRDTLRCLPGFNRLRMHNKGGAPCCFVEFQNVGFAMQALAHLQ 105
Query: 261 DSTLPSSDRGGMHIEYARSKMRK 283
L SSDRGG+ +E+A++ M +
Sbjct: 106 GLMLKSSDRGGLRVEFAKANMAQ 128
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 34 GINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALH 93
+TLF++ L + +E+ + R PGF+ +L+ +G F F N A+ AL
Sbjct: 45 ACSTLFLANLGTNTSEQELRDTLRCLPGFN--RLRMHNKGGAPCCFVEFQNVGFAMQALA 102
Query: 94 ELNGVKFDPQSGSVLHIELARSNSRKKRK 122
L G+ L +E A++N ++ +
Sbjct: 103 HLQGLMLKSSDRGGLRVEFAKANMAQENR 131
>gi|28207152|gb|AAO37216.1| hypothetical protein [Arabidopsis thaliana]
Length = 204
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFV+GLP+DV+ REI NLFR PG++ L+ + G + AFA F + Q+AVA +H
Sbjct: 34 VRTLFVAGLPEDVKPREIXNLFREFPGYETSHLR-SSDGAKPFAFAVFSDLQSAVAVMHA 92
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG+ FD + S LHI+LA+SN + KR
Sbjct: 93 LNGMVFDLEKHSTLHIDLAKSNPKSKR 119
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-GGMPVAFADFEEVEQASIAMEGLQD 261
TLF+A L + E+ +PG+ +R+ G P AFA F +++ A M L
Sbjct: 36 TLFVAGLPEDVKPREIXNLFREFPGYETSHLRSSDGAKPFAFAVFSDLQSAVAVMHALNG 95
Query: 262 STLPSSDRGGMHIEYARS 279
+HI+ A+S
Sbjct: 96 MVFDLEKHSTLHIDLAKS 113
>gi|223949569|gb|ACN28868.1| unknown [Zea mays]
Length = 234
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 98/216 (45%), Gaps = 17/216 (7%)
Query: 77 VAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVV-IDKRT 135
+ FA F A+AA L + FD ++ LH E+A+ N KR G A V KR
Sbjct: 1 MGFALFSTAHQAIAAKTALQDMVFDAETKVALHTEMAKKNLFVKRCVGIDANAVDQSKRL 60
Query: 136 KTEANVQESS------------SADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGN 183
+T + S S G A P N +A V S
Sbjct: 61 RTGGDYTHSPYAPPFHPPPPAVSMWGTPGYITAPPPYNPYAAYPVPPVAMTSPAPVTGPT 120
Query: 184 AVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAF 243
A AP+ + K PC+TLFI NLG E+EL+ SV PGF +K+ + V F
Sbjct: 121 AYAPVQNTKDNP----PCNTLFIGNLGDTVVEEELRSLFSVQPGFKQMKVLRQDRNTVCF 176
Query: 244 ADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARS 279
+FE+V A+ + LQ + +PSS RGGM I+++++
Sbjct: 177 IEFEDVNAATSVHQTLQGAVIPSSGRGGMRIQFSKN 212
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 10/139 (7%)
Query: 2 AHPPYDPYYLPPIHP----PPPPVPPP----PYHHQQQDNGINTLFVSGLPDDVRAREIH 53
A PPY+PY P+ P P PV P P + + + NTLF+ L D V E+
Sbjct: 93 APPPYNPYAAYPVPPVAMTSPAPVTGPTAYAPVQNTKDNPPCNTLFIGNLGDTVVEEELR 152
Query: 54 NLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELA 113
+LF +PGF Q+K + V F F + A + L G + I+ +
Sbjct: 153 SLFSVQPGFK--QMKVLRQDRNTVCFIEFEDVNAATSVHQTLQGAVIPSSGRGGMRIQFS 210
Query: 114 RSNSRKKRKPGSGAYVVID 132
++ +++ +G V++
Sbjct: 211 KNPFGRRKDSAAGLASVLN 229
>gi|291241724|ref|XP_002740760.1| PREDICTED: conserved hypothetical protein-like, partial
[Saccoglossus kowalevskii]
Length = 297
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 60/93 (64%)
Query: 189 NSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEE 248
N+ G PCSTLF+ANLG + TE+EL++ PGF+ L++ +GG P F +F+
Sbjct: 185 NAMAAVTGSNAPCSTLFVANLGTHTTEEELRELFGRIPGFSRLRLHNKGGAPCCFVEFQN 244
Query: 249 VEQASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
V AS A+ +Q + SSDRGG+ IE+A++KM
Sbjct: 245 VVFASQALNQMQGQVMFSSDRGGLRIEFAKNKM 277
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT---GRGNQVVAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T G+ V F TF A AA
Sbjct: 1 VRTLFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTGKQGKNTSPVGFVTFETRVGAEAA 60
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKR 121
L GV+FDP L +E A+SN++ +
Sbjct: 61 KQALQGVRFDPDIPQTLRLEFAKSNTKVSK 90
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 61/142 (42%), Gaps = 20/142 (14%)
Query: 2 AHPPYDPYYLPPIHP----PPPPVPPPPYHHQQQDNGIN----TLFVSGLPDDVRAREIH 53
AHP + P HP P PP+P + G N TLFV+ L E+
Sbjct: 161 AHP-----VIAPSHPHAPIPQPPLPASIANAMAAVTGSNAPCSTLFVANLGTHTTEEELR 215
Query: 54 NLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG-VKFDPQSGSVLHIEL 112
LF R PGF +L+ +G F F N A AL+++ G V F G L IE
Sbjct: 216 ELFGRIPGFS--RLRLHNKGGAPCCFVEFQNVVFASQALNQMQGQVMFSSDRGG-LRIEF 272
Query: 113 ARSN-SRKKRKPGSG--AYVVI 131
A++ + +PG A VV+
Sbjct: 273 AKNKMGEPQTRPGENNMAAVVV 294
>gi|212723796|ref|NP_001132012.1| uncharacterized protein LOC100193418 [Zea mays]
gi|194693198|gb|ACF80683.1| unknown [Zea mays]
gi|413934627|gb|AFW69178.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
gi|413934628|gb|AFW69179.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 203
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLF++GLP D + RE++NLFR PG+ L+ TG+ +Q AFA F + Q+A+AAL
Sbjct: 57 VRTLFIAGLPADAKPREVYNLFRDFPGYVSSHLR-TGKSSQAYAFAVFADQQSALAALSA 115
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
NG+ FD + LH++LA+SNSR KR
Sbjct: 116 TNGMVFDLEKNCSLHVDLAKSNSRSKR 142
>gi|413934629|gb|AFW69180.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 208
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLF++GLP D + RE++NLFR PG+ L+ TG+ +Q AFA F + Q+A+AAL
Sbjct: 57 VRTLFIAGLPADAKPREVYNLFRDFPGYVSSHLR-TGKSSQAYAFAVFADQQSALAALSA 115
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
NG+ FD + LH++LA+SNSR KR
Sbjct: 116 TNGMVFDLEKNCSLHVDLAKSNSRSKR 142
>gi|413942880|gb|AFW75529.1| hypothetical protein ZEAMMB73_795624, partial [Zea mays]
Length = 160
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 82/159 (51%), Gaps = 24/159 (15%)
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKR-TKTEANVQESSSADGDSD- 152
G FDP+SG LHIELA+S SR+ R G Y VIDKR KTE N + D D D
Sbjct: 1 FQGTIFDPESGDRLHIELAKSTSRRPRG-GVEGYRVIDKRANKTEGNADHENVGDEDDDE 59
Query: 153 -----------------TDEASPVRNIDSADKGDFVTTQSER---ATDSGNAVAPINSEK 192
+DE S N + +DK + T QS++ +G +++ +K
Sbjct: 60 VWGEDEDGGNDNNGDGGSDEPSGTENENPSDKNELPTDQSDQPGHKQQNGQSLSNEGRDK 119
Query: 193 PYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNML 231
+ PCST+FIANLG CTEDELK+ LS Y + +L
Sbjct: 120 S-SSDIPPCSTIFIANLGHTCTEDELKEVLSKYDVWILL 157
>gi|194708472|gb|ACF88320.1| unknown [Zea mays]
Length = 231
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 96/216 (44%), Gaps = 20/216 (9%)
Query: 77 VAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVV-IDKRT 135
+ FA F A+AA L + FD ++ LH E+A+ N KR G A V KR
Sbjct: 1 MGFALFSTAHQAIAAKTALQDMVFDAETKVALHTEMAKKNLFVKRCVGIDANAVDQSKRL 60
Query: 136 KTEANVQESS------------SADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGN 183
+T + S S G A P N +A V S
Sbjct: 61 RTGGDYTHSPYAPPFHPPPPAVSMWGTPGYITAPPPYNPYAAYPVPPVAMTSPAPVTGPT 120
Query: 184 AVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAF 243
A AP+ P C+TLFI NLG E+EL+ SV PGF +K+ + V F
Sbjct: 121 AYAPVQDNPP-------CNTLFIGNLGDTVVEEELRSLFSVQPGFKQMKVLRQDRNTVCF 173
Query: 244 ADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARS 279
+FE+V A+ + LQ + +PSS RGGM I+++++
Sbjct: 174 IEFEDVNAATSVHQTLQGAVIPSSGRGGMRIQFSKN 209
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 7/136 (5%)
Query: 2 AHPPYDPYYLPPIHP----PPPPVPPPPYHHQQQDNG-INTLFVSGLPDDVRAREIHNLF 56
A PPY+PY P+ P P PV P + QDN NTLF+ L D V E+ +LF
Sbjct: 93 APPPYNPYAAYPVPPVAMTSPAPVTGPTAYAPVQDNPPCNTLFIGNLGDTVVEEELRSLF 152
Query: 57 RRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSN 116
+PGF Q+K + V F F + A + L G + I+ +++
Sbjct: 153 SVQPGFK--QMKVLRQDRNTVCFIEFEDVNAATSVHQTLQGAVIPSSGRGGMRIQFSKNP 210
Query: 117 SRKKRKPGSGAYVVID 132
+++ +G V++
Sbjct: 211 FGRRKDSAAGLASVLN 226
>gi|224084380|ref|XP_002307278.1| predicted protein [Populus trichocarpa]
gi|222856727|gb|EEE94274.1| predicted protein [Populus trichocarpa]
Length = 97
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 60/84 (71%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ LFV+GLPDD++ EI++LFR PG++ L+ + +Q AFATF + +AVAA+H
Sbjct: 10 VRILFVAGLPDDIKPSEIYSLFREFPGYESSHLRSPSQNSQPFAFATFADQPSAVAAMHA 69
Query: 95 LNGVKFDPQSGSVLHIELARSNSR 118
LNG+ FD + GS L+ +LA+SN+R
Sbjct: 70 LNGMVFDLERGSTLYTDLAKSNAR 93
>gi|324504525|gb|ADY41956.1| Protein couch potato [Ascaris suum]
Length = 340
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 204 LFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDST 263
LF+ANLG + E+ELKQ +PGF L+M +GG VAF ++ +V QA+ AM LQ
Sbjct: 258 LFVANLGQSVNEEELKQVFRSFPGFCRLRMHTKGGTSVAFVEYLDVRQATQAMTSLQGFQ 317
Query: 264 LPSSDRGGMHIEYARSKM 281
+ SS+RGGM IEYA++KM
Sbjct: 318 ISSSERGGMRIEYAKNKM 335
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A A
Sbjct: 30 VRTLFVSGLPMDAKPRELYLLFRAYSGYESSLLKITSKNGKTASPVGFVTFSTKAEADEA 89
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKR 121
L GV+FDP + + +ELARSN++ +
Sbjct: 90 RKALQGVRFDPDNAQTIRLELARSNTKVSK 119
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
LFV+ L V E+ +FR PGF C+L+ +G VAF +++ + A A+ L G
Sbjct: 258 LFVANLGQSVNEEELKQVFRSFPGF--CRLRMHTKGGTSVAFVEYLDVRQATQAMTSLQG 315
Query: 98 VKFDPQSGSVLHIELAR 114
+ + IE A+
Sbjct: 316 FQISSSERGGMRIEYAK 332
>gi|324509983|gb|ADY44181.1| Protein couch potato [Ascaris suum]
Length = 340
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 204 LFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDST 263
LF+ANLG + E+ELKQ +PGF L+M +GG VAF ++ +V QA+ AM LQ
Sbjct: 258 LFVANLGQSVNEEELKQVFRSFPGFCRLRMHTKGGTSVAFVEYLDVRQATQAMTSLQGFQ 317
Query: 264 LPSSDRGGMHIEYARSKM 281
+ SS+RGGM IEYA++KM
Sbjct: 318 ISSSERGGMRIEYAKNKM 335
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A A
Sbjct: 30 VRTLFVSGLPMDAKPRELYLLFRAYSGYESSLLKITSKNGKTASPVGFVTFSTKAEADEA 89
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKR 121
L GV+FDP + + +ELARSN++ +
Sbjct: 90 RKALQGVRFDPDNAQTIRLELARSNTKVSK 119
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
LFV+ L V E+ +FR PGF C+L+ +G VAF +++ + A A+ L G
Sbjct: 258 LFVANLGQSVNEEELKQVFRSFPGF--CRLRMHTKGGTSVAFVEYLDVRQATQAMTSLQG 315
Query: 98 VKFDPQSGSVLHIELAR 114
+ + IE A+
Sbjct: 316 FQISSSERGGMRIEYAK 332
>gi|302842092|ref|XP_002952590.1| hypothetical protein VOLCADRAFT_32205 [Volvox carteri f.
nagariensis]
gi|300262229|gb|EFJ46437.1| hypothetical protein VOLCADRAFT_32205 [Volvox carteri f.
nagariensis]
Length = 257
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 113/263 (42%), Gaps = 31/263 (11%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT-GRGNQVVAFATFVNHQTAVAALH 93
I T+FV+G P +V RE+HNL PG++ Q+ G FA F +H A AA+
Sbjct: 3 IRTIFVTGFPSNVHERELHNLVCFLPGYEASQMNTKPATGTAPQGFALFSSHAHAQAAML 62
Query: 94 ELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDT 153
L+ + FD + L E+A N K + +V + ++ SS
Sbjct: 63 TLHDMPFD--TDCHLRCEIAHKNMYLKVRHEFRFFVFSLEYRFLRFFIRPSSL------- 113
Query: 154 DEASPVRNIDSADKGDFVTTQSERA---TDSGNAVAPINSEKPYEGGVQ----------- 199
+SPV ++ + F+ Q R + +AP P GG
Sbjct: 114 -RSSPVL---TSPEPSFLKPQVTRPPVPSCVPAGMAPPAFTSPLLGGAPAVSFGPVTNKF 169
Query: 200 ---PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAM 256
PC+TLFI NLG E+EL Q PG+ LK+ F +F ++ AS
Sbjct: 170 DNPPCNTLFIGNLGDTVDENELMQVFGNQPGYKQLKLLRHPRQVSCFVEFVDMASASAVH 229
Query: 257 EGLQDSTLPSSDRGGMHIEYARS 279
LQ L +SDRG + I+Y+++
Sbjct: 230 SRLQGCILHTSDRGPIRIQYSKN 252
>gi|218200768|gb|EEC83195.1| hypothetical protein OsI_28448 [Oryza sativa Indica Group]
Length = 215
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 97/214 (45%), Gaps = 18/214 (8%)
Query: 77 VAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVV-IDKRT 135
+ FA F + A+AA L + FD ++ + LH E+A+ N KR G+ A + KR
Sbjct: 1 MGFALFSSAHHAIAAKAALQDLIFDAETKTALHTEMAKKNLFVKRGVGNDANAMDQSKRL 60
Query: 136 KTEANVQESS-------------SADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSG 182
+T + S S G A P N +A V S
Sbjct: 61 RTGGDYTHSPYAAPPYHPPPPAVSMWGTPGYIAAPPPYNHYAAYSVPPVAMTSPSPVPGP 120
Query: 183 NAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVA 242
A AP+ + K PC+TLFI NLG E+EL+ SV PG+ +K+ + V
Sbjct: 121 TAYAPVQNTKDNP----PCNTLFIGNLGETVIEEELRSLFSVQPGYKQMKVLRQDRNTVC 176
Query: 243 FADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEY 276
F +FE+V AS LQ + +PSS RGGM I+Y
Sbjct: 177 FIEFEDVNAASAVHHNLQGAVIPSSGRGGMRIQY 210
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 2 AHPPYD---PYYLPPI-HPPPPPVPPP----PYHHQQQDNGINTLFVSGLPDDVRAREIH 53
A PPY+ Y +PP+ P PVP P P + + + NTLF+ L + V E+
Sbjct: 94 APPPYNHYAAYSVPPVAMTSPSPVPGPTAYAPVQNTKDNPPCNTLFIGNLGETVIEEELR 153
Query: 54 NLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSG 105
+LF +PG+ Q+K + V F F + A A H L G P SG
Sbjct: 154 SLFSVQPGYK--QMKVLRQDRNTVCFIEFEDVNAASAVHHNLQGAVI-PSSG 202
>gi|339251724|ref|XP_003372884.1| protein couch potato [Trichinella spiralis]
gi|316968731|gb|EFV52966.1| protein couch potato [Trichinella spiralis]
Length = 355
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 53/82 (64%)
Query: 199 QPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEG 258
QP +TLF+ANLG E EL + S PGF L++ + G PVAF ++ +V A+ A+
Sbjct: 262 QPSTTLFVANLGAKTQEQELLEVFSNIPGFIRLRILHKNGFPVAFVEYSDVINANHALNA 321
Query: 259 LQDSTLPSSDRGGMHIEYARSK 280
LQ L SSDRGGM IE+ARSK
Sbjct: 322 LQGFVLMSSDRGGMRIEFARSK 343
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 7/101 (6%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT---GRGNQVVAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T G+ + F TF + A A
Sbjct: 65 VRTLFVSGLPIDAKPRELYLLFRAYKGYESSLLKVTQKNGKATTPIGFVTFNSRAAAEEA 124
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSR----KKRKPGSGAY 128
L GVKFDP+ + +E ARSN++ K + P + AY
Sbjct: 125 KQSLQGVKFDPELPQPIRLEFARSNTKVCKPKVQSPPASAY 165
>gi|375152186|gb|AFA36551.1| RNA-binding protein-like protein, partial [Lolium perenne]
Length = 66
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 46/66 (69%)
Query: 70 TGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYV 129
TGRGNQ VAF +F H AV+A+ LNG FDP++G LHIELA+SNSRK+ G Y
Sbjct: 1 TGRGNQAVAFVSFFTHHAAVSAMVSLNGSVFDPENGDCLHIELAKSNSRKRHGGGGDVYR 60
Query: 130 VIDKRT 135
VIDKR
Sbjct: 61 VIDKRV 66
>gi|1370048|emb|CAA64866.1| mec-8 [Caenorhabditis elegans]
Length = 312
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 57/93 (61%)
Query: 189 NSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEE 248
+S++ + CSTLF+ANL ED L+ + GF L++ + G VAF ++ +
Sbjct: 215 HSQQASQASTSACSTLFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSD 274
Query: 249 VEQASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
+++A+ AM LQ + ++DRGG+ IEYAR+KM
Sbjct: 275 LQKATQAMISLQGFQITANDRGGLRIEYARNKM 307
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT---GRGNQVVAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T G+ V F TF++ Q A A
Sbjct: 30 VRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVGFVTFLSQQDAQDA 89
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKR 121
L GV+FDP+ VL +ELA+SN++ R
Sbjct: 90 RKMLQGVRFDPECAQVLRLELAKSNTKVAR 119
>gi|17508419|ref|NP_492508.1| Protein MEC-8 [Caenorhabditis elegans]
gi|1369981|emb|CAA64867.1| mec-8 [Caenorhabditis elegans]
gi|3877217|emb|CAB03111.1| Protein MEC-8 [Caenorhabditis elegans]
Length = 312
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 57/93 (61%)
Query: 189 NSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEE 248
+S++ + CSTLF+ANL ED L+ + GF L++ + G VAF ++ +
Sbjct: 215 HSQQASQASTSACSTLFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSD 274
Query: 249 VEQASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
+++A+ AM LQ + ++DRGG+ IEYAR+KM
Sbjct: 275 LQKATQAMISLQGFQITANDRGGLRIEYARNKM 307
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT---GRGNQVVAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T G+ V F TF++ Q A A
Sbjct: 30 VRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVGFVTFLSQQDAQDA 89
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKR 121
L GV+FDP+ VL +ELA+SN++ R
Sbjct: 90 RKMLQGVRFDPECAQVLRLELAKSNTKVAR 119
>gi|341895190|gb|EGT51125.1| CBN-MEC-8 protein [Caenorhabditis brenneri]
gi|341898355|gb|EGT54290.1| hypothetical protein CAEBREN_29517 [Caenorhabditis brenneri]
Length = 313
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%)
Query: 201 CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQ 260
CSTLF+ANL ED+L+ + GF L++ + G VAF ++ ++++A+ AM LQ
Sbjct: 228 CSTLFVANLSAEVNEDQLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLQKATQAMMSLQ 287
Query: 261 DSTLPSSDRGGMHIEYARSKM 281
+ ++DRGG+ IEYAR+KM
Sbjct: 288 GFQVSANDRGGLRIEYARNKM 308
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT---GRGNQVVAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T G+ V F TF+ Q A A
Sbjct: 30 VRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVGFVTFLTQQDAQDA 89
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKR 121
L GV+FDP+ VL +ELA+SN++ R
Sbjct: 90 KKLLQGVRFDPECAQVLRLELAKSNTKVAR 119
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 33 NGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAAL 92
+ +TLFV+ L +V ++ +F+ GF +L+ + VAF + + Q A A+
Sbjct: 226 SACSTLFVANLSAEVNEDQLRGVFKAFSGFT--RLRLHNKNGSCVAFVEYSDLQKATQAM 283
Query: 93 HELNGVKFDPQSGSVLHIELAR 114
L G + L IE AR
Sbjct: 284 MSLQGFQVSANDRGGLRIEYAR 305
>gi|268564730|ref|XP_002639203.1| C. briggsae CBR-MEC-8 protein [Caenorhabditis briggsae]
Length = 305
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%)
Query: 195 EGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASI 254
+ CSTLF+ANL ED+L+ + GF L++ + G VAF ++ ++++A+
Sbjct: 214 QASTSACSTLFVANLSAEVNEDQLRGVFKAFTGFTRLRLHNKNGSCVAFVEYSDLQKATQ 273
Query: 255 AMEGLQDSTLPSSDRGGMHIEYARSKM 281
AM LQ + ++DRGG+ IEYAR+KM
Sbjct: 274 AMLALQGFQVSANDRGGLRIEYARNKM 300
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT---GRGNQVVAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T G+ V F TF+ Q A A
Sbjct: 30 VRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVGFVTFLTQQDAQDA 89
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKR 121
L GV+FDP+ VL +ELA+SN++ R
Sbjct: 90 RKMLQGVRFDPECAQVLRLELAKSNTKVSR 119
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 29 QQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTA 88
Q + +TLFV+ L +V ++ +F+ GF +L+ + VAF + + Q A
Sbjct: 214 QASTSACSTLFVANLSAEVNEDQLRGVFKAFTGFT--RLRLHNKNGSCVAFVEYSDLQKA 271
Query: 89 VAALHELNGVKFDPQSGSVLHIELARS 115
A+ L G + L IE AR+
Sbjct: 272 TQAMLALQGFQVSANDRGGLRIEYARN 298
>gi|308494202|ref|XP_003109290.1| CRE-MEC-8 protein [Caenorhabditis remanei]
gi|308246703|gb|EFO90655.1| CRE-MEC-8 protein [Caenorhabditis remanei]
Length = 305
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%)
Query: 195 EGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASI 254
+ CSTLF+ANL ED+L+ + GF L++ + G VAF ++ ++ +A+
Sbjct: 214 QASTSACSTLFVANLSAEVNEDQLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLHKATQ 273
Query: 255 AMEGLQDSTLPSSDRGGMHIEYARSKM 281
AM LQ + ++DRGG+ IEYAR+KM
Sbjct: 274 AMMSLQGFQVSANDRGGLRIEYARNKM 300
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT---GRGNQVVAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T G+ V F TF+ Q A A
Sbjct: 30 VRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVGFVTFLTQQDAQDA 89
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKR 121
L GV+FDP+ VL +ELA+SN++ R
Sbjct: 90 RKMLQGVRFDPECAQVLRLELAKSNTKVAR 119
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 7/110 (6%)
Query: 8 PYYLPPIHPPPPPVPPPPYHHQQQD---NGINTLFVSGLPDDVRAREIHNLFRRKPGFDF 64
P Y +HP H QQ + +TLFV+ L +V ++ +F+ GF
Sbjct: 192 PLYATQLHPAAAAAAS--LHSQQSQASTSACSTLFVANLSAEVNEDQLRGVFKAFSGFT- 248
Query: 65 CQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELAR 114
+L+ + VAF + + A A+ L G + L IE AR
Sbjct: 249 -RLRLHNKNGSCVAFVEYSDLHKATQAMMSLQGFQVSANDRGGLRIEYAR 297
>gi|224100531|ref|XP_002311913.1| predicted protein [Populus trichocarpa]
gi|222851733|gb|EEE89280.1| predicted protein [Populus trichocarpa]
Length = 302
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 60/98 (61%), Gaps = 7/98 (7%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP H + + T+F++G PDDV+ RE+ NL R PG++ Q+ Y +G++ + FA F
Sbjct: 48 PPTHEE-----VRTIFITGFPDDVKERELQNLLRWLPGYEASQVNY--KGDKAMGFALFS 100
Query: 84 NHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
+ Q A+AA L + FD ++ SVLH E+A+ N KR
Sbjct: 101 SSQHAIAAKDSLQDMVFDVETKSVLHTEMAKKNLFVKR 138
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TLFI NLG N EDEL+ SV PGF +K+ + V F +FE++ A+ L
Sbjct: 225 PCNTLFIGNLGQNINEDELRGLFSVQPGFKQMKILRQERHTVCFIEFEDLNSATNVHHSL 284
Query: 260 QDSTLPSSDRGGMHIEY 276
Q + +PSS GM I+Y
Sbjct: 285 QGAVIPSSGSIGMRIQY 301
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 35/79 (44%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
T+FI + E EL+ L PG+ ++ +G + FA F + A A + LQD
Sbjct: 56 TIFITGFPDDVKERELQNLLRWLPGYEASQVNYKGDKAMGFALFSSSQHAIAAKDSLQDM 115
Query: 263 TLPSSDRGGMHIEYARSKM 281
+ +H E A+ +
Sbjct: 116 VFDVETKSVLHTEMAKKNL 134
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
NTLF+ L ++ E+ LF +PGF Q+K + V F F + +A H L
Sbjct: 227 NTLFIGNLGQNINEDELRGLFSVQPGFK--QMKILRQERHTVCFIEFEDLNSATNVHHSL 284
Query: 96 NGVKFDPQSGSV 107
G P SGS+
Sbjct: 285 QGAVI-PSSGSI 295
>gi|294463303|gb|ADE77187.1| unknown [Picea sitchensis]
Length = 245
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 16/214 (7%)
Query: 77 VAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTK 136
+ FA F A+ A L + FD + SVL E+A+ N KR + + KR +
Sbjct: 1 MGFALFSTAHMAIQARDALQNLVFDADTNSVLRAEMAKKNLYVKRVSDTNNFDQ-SKRMR 59
Query: 137 TEANVQESS-----------SADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAV 185
T + ++ ++ T AS + D +
Sbjct: 60 TGGDYTPAAYHAPGTFVSPPASVWGPQTYMASSTASYDPYGGYPVAQVPPVPIPVAPAGY 119
Query: 186 APINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFAD 245
AP+ + K PC+TLFI NLG N E EL+ S PGF +K+ + V F +
Sbjct: 120 APVQNMKDNP----PCNTLFIGNLGENTNETELRGLFSGQPGFRQMKVLRQERSTVCFIE 175
Query: 246 FEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARS 279
+E++ A+ LQ + L SS+RGGM I+Y+++
Sbjct: 176 YEDLHSAAAVHNNLQGAVLSSSERGGMRIQYSKN 209
>gi|449447968|ref|XP_004141738.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
sativus]
gi|449515829|ref|XP_004164950.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
sativus]
Length = 335
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+F++GLP+DV+ RE+ NL R PG++ Q+ + +G + + FA F N Q A+AA
Sbjct: 56 VRTIFITGLPEDVKERELQNLLRWLPGYEASQVNF--KGEKPMGFALFSNAQFAIAAKDA 113
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
L + FD +S SVLH E+A+ N KR
Sbjct: 114 LQDMVFDAESKSVLHTEMAKKNLFVKR 140
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TLFI NLG N E+EL+ SV PGF +K+ + V F +FE+V A+ L
Sbjct: 229 PCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSL 288
Query: 260 QDSTLPSSDRGGMHIEYARSKMRK 283
Q + +PSS GM I+++++ K
Sbjct: 289 QGAVIPSSGSVGMRIQFSKNPFGK 312
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
T+FI L + E EL+ L PG+ ++ +G P+ FA F + A A + LQD
Sbjct: 58 TIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDM 117
Query: 263 TLPSSDRGGMHIEYARSKM 281
+ + +H E A+ +
Sbjct: 118 VFDAESKSVLHTEMAKKNL 136
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
NTLF+ L ++V E+ LF +PGF Q+K + V F F + A H L
Sbjct: 231 NTLFIGNLGENVNEEELRGLFSVQPGFK--QMKILRQERHTVCFIEFEDVNNATNVHHSL 288
Query: 96 NGVKFDPQSGSV-LHIELARSNSRKKRK 122
G P SGSV + I+ ++ N KRK
Sbjct: 289 QGAVI-PSSGSVGMRIQFSK-NPFGKRK 314
>gi|223648622|gb|ACN11069.1| RNA-binding protein with multiple splicing [Salmo salar]
Length = 200
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F TF N A AA +
Sbjct: 20 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDNRTGAEAAKNA 77
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP+S L +E A++N++ +
Sbjct: 78 LNGIRFDPESPQTLRLEFAKANTKMAK 104
>gi|384486783|gb|EIE78963.1| hypothetical protein RO3G_03668 [Rhizopus delemar RA 99-880]
Length = 236
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 102/241 (42%), Gaps = 43/241 (17%)
Query: 50 REIHNLFRRKPGFDFCQLKY-----------TGRGNQVVAFATFVNHQTAVAALHELNGV 98
RE N+F GF+ LK+ G Q++ FA F A+ ++ L+G
Sbjct: 4 REFQNMFTFCRGFEAASLKWHCKDQEDDMLNNGGKKQMIGFARFKTRLEALESIEVLSGK 63
Query: 99 KFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTDEASP 158
K D + G+VL E+A+ N KR + +D + S D SP
Sbjct: 64 KIDQEKGTVLKAEMAKKNLHIKRATTGNS---VDMKP---------------SIYDHFSP 105
Query: 159 VRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDEL 218
+ D DS P++ + P PC+TL++ NL N +E+EL
Sbjct: 106 L-------PSDLFHDSDMLMDDSLFRKRPVD-QNP------PCNTLYVGNLPLNTSEEEL 151
Query: 219 KQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYAR 278
S G+ + R + P+ F +FE++ AS + LQ L +S +GG+ + Y++
Sbjct: 152 SDLFSNREGYRRMCFRTKSQGPMCFVEFEDIPSASHTLNELQGHALTNSVKGGIRLSYSK 211
Query: 279 S 279
+
Sbjct: 212 N 212
>gi|449681275|ref|XP_002157969.2| PREDICTED: uncharacterized protein LOC100208163 [Hydra
magnipapillata]
Length = 328
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 201 CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEGL 259
C+TLF+ANLG N TEDELK P F LKM R +G PV+F ++ +V A A
Sbjct: 230 CTTLFVANLGYNTTEDELKNMFGRIPSFRRLKMLRNKGTTPVSFVEYSDVIGALHAKNIF 289
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
+ L +S+ GG+ IE+AR+KM
Sbjct: 290 HGAVLLTSENGGIRIEFARNKM 311
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + REI+ +FR G+ LK TG+ + VAF TF N + A
Sbjct: 26 VRTLFVSGLPMDTKPREIYLMFRSYSGYQGSLLKLTGKEGKKATPVAFVTFENREQAEVC 85
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKR 121
EL G++FDP+ + + IE A++N++ +
Sbjct: 86 KAELQGIRFDPELPTSIRIEFAKANTKVTK 115
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
Query: 199 QPCSTLFIANLGPNCTEDELKQTLSVYPGF--NMLKMRARGG---MPVAFADFEEVEQAS 253
Q TLF++ L + E+ Y G+ ++LK+ + G PVAF FE EQA
Sbjct: 24 QEVRTLFVSGLPMDTKPREIYLMFRSYSGYQGSLLKLTGKEGKKATPVAFVTFENREQAE 83
Query: 254 IAMEGLQ----DSTLPSSDRGGMHIEYARSKMR 282
+ LQ D LP+S R IE+A++ +
Sbjct: 84 VCKAELQGIRFDPELPTSIR----IEFAKANTK 112
>gi|426234121|ref|XP_004011049.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Ovis
aries]
Length = 270
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 60/95 (63%), Gaps = 5/95 (5%)
Query: 30 QQDNG---INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQ 86
QQ+NG + TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F +
Sbjct: 83 QQENGKLYVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRA 140
Query: 87 TAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A AA + LNG++FDP++ L +E A++N++ +
Sbjct: 141 GAEAAKNALNGIRFDPENPQTLRLEFAKANTKMAK 175
>gi|442619721|ref|NP_001014632.3| couch potato, isoform S [Drosophila melanogaster]
gi|440217575|gb|AAX52960.3| couch potato, isoform S [Drosophila melanogaster]
Length = 962
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 62/133 (46%), Gaps = 32/133 (24%)
Query: 178 ATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARG 237
A + NA P N P PCSTLF+ANLG +E ELK+ S PGF L+M +
Sbjct: 693 AGSTNNASHPGN---PQIAANAPCSTLFVANLGQFVSEHELKEVFSSMPGFCRLRMHTKA 749
Query: 238 GM-----------------------------PVAFADFEEVEQASIAMEGLQDSTLPSSD 268
PVAF +F++ AS AM+ LQ L SSD
Sbjct: 750 MATATGSSCSTSNGSGSSSNSNHNSAAVQQHPVAFIEFKDPPTASQAMQQLQGKYLLSSD 809
Query: 269 RGGMHIEYARSKM 281
RG + IE+ARSKM
Sbjct: 810 RGSIRIEFARSKM 822
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 441 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 500
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSR-KKRKP 123
+L GV+FDP + +E A+SN++ K KP
Sbjct: 501 KQDLQGVRFDPDMPQTIRLEFAKSNTKVSKPKP 533
>gi|156408498|ref|XP_001641893.1| predicted protein [Nematostella vectensis]
gi|156229034|gb|EDO49830.1| predicted protein [Nematostella vectensis]
Length = 97
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP DV+ RE++ LFR G++ LK T + Q VAF TF N A A E
Sbjct: 1 VRTLFVSGLPLDVKPREVYLLFRSFKGYEGSLLKLTDK--QPVAFVTFENKDCASDAKSE 58
Query: 95 LNGVKFDPQSGSVLHIELARSNSR 118
L GV+FDP L +E A+SN++
Sbjct: 59 LQGVQFDPDVSQTLRLEFAKSNTK 82
>gi|50539886|ref|NP_001002409.1| RNA binding protein with multiple splicing 2 [Danio rerio]
gi|166158150|ref|NP_001107477.1| uncharacterized protein LOC100135328 [Xenopus (Silurana)
tropicalis]
gi|49902931|gb|AAH76171.1| Zgc:92689 [Danio rerio]
gi|156230446|gb|AAI52179.1| Zgc:92689 [Danio rerio]
gi|163915769|gb|AAI57627.1| LOC100135328 protein [Xenopus (Silurana) tropicalis]
Length = 199
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F TF + A AA +
Sbjct: 19 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRSGAEAAKNA 76
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP+S L +E A++N++ +
Sbjct: 77 LNGIRFDPESPQTLRLEFAKANTKMAK 103
>gi|119583863|gb|EAW63459.1| hCG2043421, isoform CRA_b [Homo sapiens]
gi|119583865|gb|EAW63461.1| hCG2043421, isoform CRA_b [Homo sapiens]
Length = 179
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 13 PSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 70
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A AA + LNG++FDP+ L +E A++N++ +
Sbjct: 71 RSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAK 107
>gi|13124485|sp|Q9WVB0.1|RBPMS_MOUSE RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|5081739|gb|AAD39515.1|AF148511_1 hermes [Mus musculus]
Length = 197
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 13 PSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 70
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSR 118
A AA + LNG++FDP+ L IE A++N++
Sbjct: 71 RSEAEAAKNALNGIRFDPEIPQTLRIEFAKANTK 104
>gi|344281668|ref|XP_003412600.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Loxodonta africana]
Length = 196
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 13 PSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 70
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A AA + LNG++FDP+ L +E A++N++ +
Sbjct: 71 RSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAK 107
>gi|301619061|ref|XP_002938920.1| PREDICTED: hypothetical protein LOC100038109 [Xenopus (Silurana)
tropicalis]
Length = 198
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F TF N A AA +
Sbjct: 19 VRTLFVSGLPIDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDNRAGAEAAKNA 76
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 77 LNGIRFDPENPQTLRLEFAKANTKMAK 103
>gi|213513247|ref|NP_001133590.1| RNA-binding protein with multiple splicing [Salmo salar]
gi|209154600|gb|ACI33532.1| RNA-binding protein with multiple splicing [Salmo salar]
Length = 201
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F TF N A AA +
Sbjct: 21 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDNRTGAEAAKNA 78
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP+ L +E A++N++ +
Sbjct: 79 LNGIRFDPECPQTLRLEFAKANTKMAK 105
>gi|57164971|ref|NP_001008711.1| RNA-binding protein with multiple splicing isoform B [Homo sapiens]
gi|1669549|dbj|BAA12226.1| RBP-MS/type 2 [Homo sapiens]
gi|119583858|gb|EAW63454.1| hCG14793, isoform CRA_c [Homo sapiens]
Length = 204
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 13 PSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 70
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A AA + LNG++FDP+ L +E A++N++ +
Sbjct: 71 RSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAK 107
>gi|5803141|ref|NP_006858.1| RNA-binding protein with multiple splicing isoform A [Homo sapiens]
gi|57164969|ref|NP_001008710.1| RNA-binding protein with multiple splicing isoform A [Homo sapiens]
gi|291386102|ref|XP_002709595.1| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Oryctolagus cuniculus]
gi|395850272|ref|XP_003797718.1| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Otolemur garnettii]
gi|13124469|sp|Q93062.1|RBPMS_HUMAN RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|1669547|dbj|BAA12225.1| RBP-MS/type 1 [Homo sapiens]
gi|1669553|dbj|BAA12228.1| RBP-MS/type 4 [Homo sapiens]
gi|119583855|gb|EAW63451.1| hCG14793, isoform CRA_a [Homo sapiens]
gi|119583857|gb|EAW63453.1| hCG14793, isoform CRA_a [Homo sapiens]
gi|383415403|gb|AFH30915.1| RNA-binding protein with multiple splicing isoform A [Macaca
mulatta]
gi|410212520|gb|JAA03479.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410253370|gb|JAA14652.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410294226|gb|JAA25713.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410342393|gb|JAA40143.1| RNA binding protein with multiple splicing [Pan troglodytes]
Length = 196
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 13 PSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 70
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A AA + LNG++FDP+ L +E A++N++ +
Sbjct: 71 RSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAK 107
>gi|348526652|ref|XP_003450833.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Oreochromis niloticus]
Length = 199
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F TF + A AA +
Sbjct: 19 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRSGAEAAKNA 76
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP+S L +E A++N++ +
Sbjct: 77 LNGIRFDPESPQTLRLEFAKANTKMAK 103
>gi|148222884|ref|NP_001087735.1| RNA binding protein with multiple splicing 2 [Xenopus laevis]
gi|51703926|gb|AAH81153.1| MGC84222 protein [Xenopus laevis]
Length = 197
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F TF N A AA +
Sbjct: 19 VRTLFVSGLPIDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDNRAGAEAAKNA 76
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 77 LNGIRFDPENPQTLRLEFAKANTKMAK 103
>gi|301619063|ref|XP_002938921.1| PREDICTED: hypothetical protein LOC100038109 [Xenopus (Silurana)
tropicalis]
Length = 199
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F TF N A AA +
Sbjct: 19 VRTLFVSGLPIDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDNRAGAEAAKNA 76
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 77 LNGIRFDPENPQTLRLEFAKANTKMAK 103
>gi|326669776|ref|XP_003199078.1| PREDICTED: RNA-binding protein with multiple splicing-like [Danio
rerio]
Length = 183
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K+T + Q V F +F + A AA +
Sbjct: 20 VRTLFVSGLPMDIKPRELYLLFRPFQGYEGSLIKFTSK--QPVGFVSFSSRSEAEAAKNR 77
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRK 122
LNGV+FDP L +E A++N++ R+
Sbjct: 78 LNGVRFDPDVPQTLRLEFAKANTKMSRR 105
>gi|301770903|ref|XP_002920867.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Ailuropoda melanoleuca]
Length = 195
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 12 PNEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 69
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A AA + LNG++FDP+ L +E A++N++ +
Sbjct: 70 RSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAK 106
>gi|41053746|ref|NP_956553.1| RNA binding protein with multiple splicing 2b [Danio rerio]
gi|29124508|gb|AAH48876.1| RNA binding protein with multiple splicing 2 [Danio rerio]
gi|42542540|gb|AAH66414.1| Rbpms2 protein [Danio rerio]
gi|45126693|dbj|BAD12195.1| RNA binding protein [Danio rerio]
Length = 200
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P ++ + + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F TF +
Sbjct: 9 PNNNVSLEEEVRTLFVSGLPTDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDS 66
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A AA + LNGV+FDP++ L +E A++N++ +
Sbjct: 67 RSGAEAAKNALNGVRFDPENPQTLRLEFAKANTKMAK 103
>gi|148223487|ref|NP_001081864.1| RNA-binding protein with multiple splicing [Xenopus laevis]
gi|13124486|sp|Q9YGP5.1|RBPMS_XENLA RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|4324639|gb|AAD16971.1| RRM-type RNA-binding protein hermes [Xenopus laevis]
gi|66912013|gb|AAH97507.1| LOC398092 protein [Xenopus laevis]
Length = 196
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F TF N A AA +
Sbjct: 19 VRTLFVSGLPIDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDNRAGAEAAKNA 76
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 77 LNGIRFDPENPQTLRLEFAKANTKMAK 103
>gi|194226464|ref|XP_001915758.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Equus caballus]
gi|350593440|ref|XP_003483688.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Sus scrofa]
gi|410956133|ref|XP_003984699.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Felis catus]
Length = 196
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 13 PNEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 70
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A AA + LNG++FDP+ L +E A++N++ +
Sbjct: 71 RSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAK 107
>gi|348553688|ref|XP_003462658.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Cavia porcellus]
Length = 196
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F + A A
Sbjct: 19 QEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEA 76
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A + LNG++FDP+ L +E A++N++ +
Sbjct: 77 AKNALNGIRFDPEIPQTLRLEFAKANTKMAK 107
>gi|213405979|ref|XP_002173761.1| cell wall integrity protein scw1 [Schizosaccharomyces japonicus
yFS275]
gi|212001808|gb|EEB07468.1| cell wall integrity protein scw1 [Schizosaccharomyces japonicus
yFS275]
Length = 565
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 52/82 (63%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+T+++ NL P+ +EDELK S PG+ L R +G P+ F +FE + A+ A++ L
Sbjct: 436 PCNTIYVGNLPPSTSEDELKALFSTQPGYKRLCFRTKGNGPMCFVEFESIAYATEALKAL 495
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
Q L SS +GG+ + ++++ +
Sbjct: 496 QGVCLSSSVKGGIRLSFSKNPL 517
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 5 PYDPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDF 64
P+ P+ H P P + Q+ NT++V LP E+ LF +PG+
Sbjct: 407 PFAPFVSHSFHQRAPVTTPVNINPADQNPPCNTIYVGNLPPSTSEDELKALFSTQPGYK- 465
Query: 65 CQLKYTGRGNQVVAFATFVNHQTAVAALHELNGV 98
+L + +GN + F F + A AL L GV
Sbjct: 466 -RLCFRTKGNGPMCFVEFESIAYATEALKALQGV 498
>gi|284005979|gb|ADB57051.1| MIP15437p [Drosophila melanogaster]
Length = 299
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 62/133 (46%), Gaps = 32/133 (24%)
Query: 178 ATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARG 237
A + NA P N P PCSTLF+ANLG +E ELK+ S PGF L+M +
Sbjct: 30 AGSTNNASHPGN---PQIAANAPCSTLFVANLGQFVSEHELKEVFSSMPGFCRLRMHTKA 86
Query: 238 GM-----------------------------PVAFADFEEVEQASIAMEGLQDSTLPSSD 268
PVAF +F++ AS AM+ LQ L SSD
Sbjct: 87 MATATGSSCSTSNGSGSSSNSNHNSAAVQQHPVAFIEFKDPPTASQAMQQLQGKYLLSSD 146
Query: 269 RGGMHIEYARSKM 281
RG + IE+ARSKM
Sbjct: 147 RGSIRIEFARSKM 159
>gi|363733276|ref|XP_426296.3| PREDICTED: RNA-binding protein with multiple splicing [Gallus
gallus]
Length = 186
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 27 HHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQ 86
+ + Q + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 5 YPESQARKVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRS 62
Query: 87 TAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A AA + LNG++FDP+ L +E A++N++ +
Sbjct: 63 EAEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAK 97
>gi|403294314|ref|XP_003938139.1| PREDICTED: RNA-binding protein with multiple splicing [Saimiri
boliviensis boliviensis]
Length = 219
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 13 PSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 70
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A AA + LNG++FDP+ L +E A++N++ +
Sbjct: 71 RSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAK 107
>gi|344281670|ref|XP_003412601.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Loxodonta africana]
Length = 219
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 13 PSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 70
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A AA + LNG++FDP+ L +E A++N++ +
Sbjct: 71 RSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAK 107
>gi|327279916|ref|XP_003224701.1| PREDICTED: RNA-binding protein with multiple splicing-like [Anolis
carolinensis]
Length = 255
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 61/99 (61%), Gaps = 5/99 (5%)
Query: 20 PVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAF 79
P PP P +++ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F
Sbjct: 69 PTPPEPSLTEEE---VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGF 123
Query: 80 ATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSR 118
+F + A AA + LNG++FDP+ L +E A++N++
Sbjct: 124 VSFDSRSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTK 162
>gi|62203475|gb|AAH92476.1| RNA binding protein with multiple splicing [Homo sapiens]
Length = 219
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 13 PSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 70
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A AA + LNG++FDP+ L +E A++N++ +
Sbjct: 71 RSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAK 107
>gi|293342475|ref|XP_001059526.2| PREDICTED: uncharacterized protein LOC498642 isoform 2 [Rattus
norvegicus]
Length = 197
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 13 PSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 70
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSR 118
A AA + LNG++FDP+ L +E A++N++
Sbjct: 71 RSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTK 104
>gi|390473655|ref|XP_002756964.2| PREDICTED: RNA-binding protein with multiple splicing [Callithrix
jacchus]
Length = 219
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 13 PSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 70
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A AA + LNG++FDP+ L +E A++N++ +
Sbjct: 71 RSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAK 107
>gi|33342267|ref|NP_062707.1| RNA-binding protein with multiple splicing isoform 1 [Mus musculus]
gi|111185961|ref|NP_001036139.1| RNA-binding protein with multiple splicing isoform 2 [Mus musculus]
gi|20988889|gb|AAH30397.1| RNA binding protein gene with multiple splicing [Mus musculus]
gi|26334219|dbj|BAC30827.1| unnamed protein product [Mus musculus]
Length = 197
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 13 PSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 70
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSR 118
A AA + LNG++FDP+ L +E A++N++
Sbjct: 71 RSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTK 104
>gi|291386104|ref|XP_002709596.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Oryctolagus cuniculus]
Length = 219
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 13 PSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 70
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A AA + LNG++FDP+ L +E A++N++ +
Sbjct: 71 RSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAK 107
>gi|57164973|ref|NP_001008712.1| RNA-binding protein with multiple splicing isoform C [Homo sapiens]
gi|332825789|ref|XP_001167950.2| PREDICTED: RNA-binding protein with multiple splicing [Pan
troglodytes]
gi|345781578|ref|XP_532815.3| PREDICTED: RNA-binding protein with multiple splicing [Canis lupus
familiaris]
gi|395739552|ref|XP_002819013.2| PREDICTED: RNA-binding protein with multiple splicing [Pongo
abelii]
gi|1669551|dbj|BAA12227.1| RBP-MS/type 3 [Homo sapiens]
gi|13177644|gb|AAH03608.1| RNA binding protein with multiple splicing [Homo sapiens]
gi|119583866|gb|EAW63462.1| hCG2043421, isoform CRA_d [Homo sapiens]
gi|261858762|dbj|BAI45903.1| RNA binding protein with multiple splicing [synthetic construct]
gi|383415405|gb|AFH30916.1| RNA-binding protein with multiple splicing isoform C [Macaca
mulatta]
gi|387541276|gb|AFJ71265.1| RNA-binding protein with multiple splicing isoform C [Macaca
mulatta]
gi|410212518|gb|JAA03478.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410212522|gb|JAA03480.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410253368|gb|JAA14651.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410253372|gb|JAA14653.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410294224|gb|JAA25712.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410294228|gb|JAA25714.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410342391|gb|JAA40142.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410342395|gb|JAA40144.1| RNA binding protein with multiple splicing [Pan troglodytes]
Length = 219
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 13 PSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 70
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A AA + LNG++FDP+ L +E A++N++ +
Sbjct: 71 RSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAK 107
>gi|395502670|ref|XP_003755700.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Sarcophilus harrisii]
Length = 207
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 32 DNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
D + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F TF + A AA
Sbjct: 25 DYKVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRAGAEAA 82
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKR 121
+ LNG++FDP++ L +E A++N++ +
Sbjct: 83 KNALNGIRFDPENPQTLRLEFAKANTKMAK 112
>gi|297835092|ref|XP_002885428.1| hypothetical protein ARALYDRAFT_479641 [Arabidopsis lyrata subsp.
lyrata]
gi|297331268|gb|EFH61687.1| hypothetical protein ARALYDRAFT_479641 [Arabidopsis lyrata subsp.
lyrata]
Length = 339
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TLFI NLG N E+EL+ LS PGF +K+ + V F +FE+V A+ L
Sbjct: 231 PCNTLFIGNLGENINEEELRSLLSAQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNL 290
Query: 260 QDSTLPSSDRGGMHIEYARS 279
Q + +PSS GM I+Y+++
Sbjct: 291 QGAVIPSSGSIGMRIQYSKN 310
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 8/98 (8%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PPY + + T+F++GLPDDV+ RE+ NL R PG++ Q+ + +G + + FA F
Sbjct: 53 PPY------DELRTIFIAGLPDDVKERELLNLLRWLPGYEASQVNF--KGEKPMGFALFS 104
Query: 84 NHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
Q A+AA L + FD +S SV+H E+A+ N KR
Sbjct: 105 TAQYAMAAKDNLQHMVFDAESKSVIHTEMAKKNLFVKR 142
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
NTLF+ L +++ E+ +L +PGF Q+K + V F F + +A H L
Sbjct: 233 NTLFIGNLGENINEEELRSLLSAQPGFK--QMKILRQERHTVCFIEFEDVNSATNVHHNL 290
Query: 96 NGVKFDPQSGSV-LHIELARSNSRKKRKPGSG 126
G P SGS+ + I+ ++ N KRK G G
Sbjct: 291 QGAVI-PSSGSIGMRIQYSK-NPYGKRKEGGG 320
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
T+FIA L + E EL L PG+ ++ +G P+ FA F + A A + LQ
Sbjct: 60 TIFIAGLPDDVKERELLNLLRWLPGYEASQVNFKGEKPMGFALFSTAQYAMAAKDNLQHM 119
Query: 263 TLPSSDRGGMHIEYARSKM 281
+ + +H E A+ +
Sbjct: 120 VFDAESKSVIHTEMAKKNL 138
>gi|30686138|ref|NP_683582.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|13605613|gb|AAK32800.1|AF361632_1 At3g21211 [Arabidopsis thaliana]
gi|23505943|gb|AAN28831.1| At3g21211/At3g21211 [Arabidopsis thaliana]
gi|26451397|dbj|BAC42798.1| unknown protein [Arabidopsis thaliana]
gi|110740646|dbj|BAE98426.1| hypothetical protein [Arabidopsis thaliana]
gi|222423570|dbj|BAH19754.1| AT3G21215 [Arabidopsis thaliana]
gi|332642956|gb|AEE76477.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 339
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TLFI NLG N E+EL+ LS PGF +K+ + V F +FE+V A+ L
Sbjct: 231 PCNTLFIGNLGENINEEELRSLLSAQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNL 290
Query: 260 QDSTLPSSDRGGMHIEYARS 279
Q + +PSS GM I+Y+++
Sbjct: 291 QGAVIPSSGSIGMRIQYSKN 310
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 8/98 (8%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PPY + + T+F++GLPDDV+ RE+ NL R PG++ Q+ + +G + + FA F
Sbjct: 53 PPY------DELRTIFIAGLPDDVKERELLNLLRWLPGYEASQVNF--KGEKPMGFALFS 104
Query: 84 NHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
Q A+AA L + FD +S SV+H E+A+ N KR
Sbjct: 105 TAQFAMAAKDTLQHMVFDAESKSVIHTEMAKKNLFVKR 142
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
NTLF+ L +++ E+ +L +PGF Q+K + V F F + +A H L
Sbjct: 233 NTLFIGNLGENINEEELRSLLSAQPGFK--QMKILRQERHTVCFIEFEDVNSATNVHHNL 290
Query: 96 NGVKFDPQSGSV-LHIELARSNSRKKRKPGSG 126
G P SGS+ + I+ ++ N KRK G G
Sbjct: 291 QGAVI-PSSGSIGMRIQYSK-NPYGKRKEGGG 320
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
T+FIA L + E EL L PG+ ++ +G P+ FA F + A A + LQ
Sbjct: 60 TIFIAGLPDDVKERELLNLLRWLPGYEASQVNFKGEKPMGFALFSTAQFAMAAKDTLQHM 119
Query: 263 TLPSSDRGGMHIEYARSKM 281
+ + +H E A+ +
Sbjct: 120 VFDAESKSVIHTEMAKKNL 138
>gi|26347873|dbj|BAC37585.1| unnamed protein product [Mus musculus]
Length = 170
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 13 PSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 70
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSR 118
A AA + LNG++FDP+ L +E A++N++
Sbjct: 71 RSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTK 104
>gi|417397319|gb|JAA45693.1| Putative rna-binding protein with multiple splicing-like isoform 2
equus caballus [Desmodus rotundus]
Length = 219
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 13 PNEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 70
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A AA + LNG++FDP+ L +E A++N++ +
Sbjct: 71 RSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAK 107
>gi|338720949|ref|XP_003364277.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Equus caballus]
gi|350593442|ref|XP_003133441.3| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Sus scrofa]
gi|410956131|ref|XP_003984698.1| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Felis catus]
Length = 219
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 13 PNEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 70
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A AA + LNG++FDP+ L +E A++N++ +
Sbjct: 71 RSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAK 107
>gi|395850274|ref|XP_003797719.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Otolemur garnettii]
Length = 242
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 13 PSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 70
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A AA + LNG++FDP+ L +E A++N++ +
Sbjct: 71 RSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAK 107
>gi|348553686|ref|XP_003462657.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Cavia porcellus]
Length = 219
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F + A A
Sbjct: 19 QEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEA 76
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A + LNG++FDP+ L +E A++N++ +
Sbjct: 77 AKNALNGIRFDPEIPQTLRLEFAKANTKMAK 107
>gi|296472388|tpg|DAA14503.1| TPA: RNA-binding protein with multiple splicing [Bos taurus]
gi|440895026|gb|ELR47324.1| RNA-binding protein with multiple splicing [Bos grunniens mutus]
Length = 219
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 13 PNEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 70
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A AA + LNG++FDP+ L +E A++N++ +
Sbjct: 71 RSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAK 107
>gi|114052324|ref|NP_001040000.1| RNA-binding protein with multiple splicing [Bos taurus]
gi|86438185|gb|AAI12765.1| RNA binding protein with multiple splicing [Bos taurus]
Length = 219
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 13 PNEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 70
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A AA + LNG++FDP+ L +E A++N++ +
Sbjct: 71 RSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAK 107
>gi|332240824|ref|XP_003269587.1| PREDICTED: RNA-binding protein with multiple splicing [Nomascus
leucogenys]
Length = 219
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F + A A
Sbjct: 19 QEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEA 76
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A + LNG++FDP+ L +E A++N++ +
Sbjct: 77 AKNALNGIRFDPEIPQTLRLEFAKANTKMAK 107
>gi|332235691|ref|XP_003267039.1| PREDICTED: RNA-binding protein with multiple splicing 2, partial
[Nomascus leucogenys]
Length = 214
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 23/120 (19%)
Query: 23 PPPYHHQQQDNG---------------------INTLFVSGLPDDVRAREIHNLFRRKPG 61
PPP+H Q + +G + TLFVSGLP D++ RE++ LFR G
Sbjct: 2 PPPHHEQLKPDGEHGGSTGTGSGAGSGGALEEEVRTLFVSGLPVDIKPRELYLLFRPFKG 61
Query: 62 FDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
++ +K T R Q V F F + A AA + LNG++FDP++ L +E A++N++ +
Sbjct: 62 YEGSLIKLTAR--QPVGFVIFDSRAGAEAAKNALNGIRFDPENPQTLRLEFAKANTKMAK 119
>gi|9280223|dbj|BAB01713.1| unnamed protein product [Arabidopsis thaliana]
Length = 317
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 8/98 (8%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PPY + + T+F++GLPDDV+ RE+ NL R PG++ Q+ + +G + + FA F
Sbjct: 53 PPY------DELRTIFIAGLPDDVKERELLNLLRWLPGYEASQVNF--KGEKPMGFALFS 104
Query: 84 NHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
Q A+AA L + FD +S SV+H E+A+ N KR
Sbjct: 105 TAQFAMAAKDTLQHMVFDAESKSVIHTEMAKKNLFVKR 142
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TLFI NLG N E+EL+ LS PGF +K+ + V F +FE+V A+ L
Sbjct: 231 PCNTLFIGNLGENINEEELRSLLSAQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNL 290
Query: 260 QDSTLPSSDRGGMHIEY 276
Q + +PSS GM I+Y
Sbjct: 291 QGAVIPSSGSIGMRIQY 307
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
T+FIA L + E EL L PG+ ++ +G P+ FA F + A A + LQ
Sbjct: 60 TIFIAGLPDDVKERELLNLLRWLPGYEASQVNFKGEKPMGFALFSTAQFAMAAKDTLQHM 119
Query: 263 TLPSSDRGGMHIEYARSKM 281
+ + +H E A+ +
Sbjct: 120 VFDAESKSVIHTEMAKKNL 138
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
NTLF+ L +++ E+ +L +PGF Q+K + V F F + +A H L
Sbjct: 233 NTLFIGNLGENINEEELRSLLSAQPGFK--QMKILRQERHTVCFIEFEDVNSATNVHHNL 290
Query: 96 NGVKFDPQSGSV 107
G P SGS+
Sbjct: 291 QGAVI-PSSGSI 301
>gi|111185959|ref|NP_001036140.1| RNA-binding protein with multiple splicing isoform 3 [Mus musculus]
gi|403420640|ref|NP_001258173.1| RNA-binding protein with multiple splicing [Rattus norvegicus]
gi|12848898|dbj|BAB28128.1| unnamed protein product [Mus musculus]
gi|12849426|dbj|BAB28336.1| unnamed protein product [Mus musculus]
Length = 220
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 13 PSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 70
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A AA + LNG++FDP+ L +E A++N++ +
Sbjct: 71 RSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAK 107
>gi|432851215|ref|XP_004066912.1| PREDICTED: RNA-binding protein with multiple splicing-like [Oryzias
latipes]
Length = 264
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F TF + A AA +
Sbjct: 84 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRSGAEAAKNA 141
Query: 95 LNGVKFDPQSGSVLHIELARSNSR 118
LNG++FDP+S L +E A++N++
Sbjct: 142 LNGIRFDPESPQTLRLEFAKANTK 165
>gi|313221526|emb|CBY32273.1| unnamed protein product [Oikopleura dioica]
Length = 317
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Query: 27 HHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV-----VAFAT 81
H Q++ + TLFVSGLP DV+ RE+ LFR GF+ LK+ + +V VAF T
Sbjct: 71 HESYQNDEVRTLFVSGLPSDVKQRELRLLFRPYKGFESAVLKFPQKPGKVYPIAPVAFVT 130
Query: 82 FVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRK 122
F + A EL G KFD + + L +E A+SN++ + K
Sbjct: 131 FKSKAEAQVPKEELQGEKFDNDNPTTLRLEFAKSNTKNRMK 171
>gi|119583864|gb|EAW63460.1| hCG2043421, isoform CRA_c [Homo sapiens]
gi|194389216|dbj|BAG65596.1| unnamed protein product [Homo sapiens]
Length = 224
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F + A A
Sbjct: 19 QEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEA 76
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A + LNG++FDP+ L +E A++N++ +
Sbjct: 77 AKNALNGIRFDPEIPQTLRLEFAKANTKMAK 107
>gi|297299182|ref|XP_002805345.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Macaca mulatta]
gi|297299184|ref|XP_001083170.2| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Macaca mulatta]
Length = 224
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F + A A
Sbjct: 19 QEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEA 76
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A + LNG++FDP+ L +E A++N++ +
Sbjct: 77 AKNALNGIRFDPEIPQTLRLEFAKANTKMAK 107
>gi|350578519|ref|XP_003121510.3| PREDICTED: RNA-binding protein with multiple splicing 2-like [Sus
scrofa]
Length = 327
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 147 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKNA 204
Query: 95 LNGVKFDPQSGSVLHIELARSNSR 118
LNG++FDP++ L +E A++N++
Sbjct: 205 LNGIRFDPENPQTLRLEFAKANTK 228
>gi|345314045|ref|XP_001507449.2| PREDICTED: RNA-binding protein with multiple splicing-like, partial
[Ornithorhynchus anatinus]
Length = 123
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F TF N A AA +
Sbjct: 1 VRTLFVSGLPMDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDNRAGAEAAKNA 58
Query: 95 LNGVKFDPQSGSVLHIELARSNSR 118
LNG++FDP++ L +E A++N++
Sbjct: 59 LNGIRFDPENPQTLRLEFAKANTK 82
>gi|344293499|ref|XP_003418460.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Loxodonta africana]
Length = 183
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 32 DNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
D + TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA
Sbjct: 2 DERVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAA 59
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKR 121
+ LNG++FDP++ L +E A++N++ +
Sbjct: 60 KNALNGIRFDPENPQTLRLEFAKANTKMAK 89
>gi|402874657|ref|XP_003901146.1| PREDICTED: uncharacterized protein LOC101014530 [Papio anubis]
Length = 427
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 248 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAKNA 305
Query: 95 LNGVKFDPQSGSVLHIELARSNSR 118
LNG++FDP++ L +E A++N++
Sbjct: 306 LNGIRFDPENPQTLRLEFAKANTK 329
>gi|224049139|ref|XP_002196184.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Taeniopygia guttata]
Length = 195
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 32 DNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F + A AA
Sbjct: 19 EEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAA 76
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKR 121
+ LNG++FDP+ L +E A++N++ +
Sbjct: 77 KNALNGIRFDPEIPQTLRLEFAKANTKMAK 106
>gi|327285368|ref|XP_003227406.1| PREDICTED: RNA-binding protein with multiple splicing-like, partial
[Anolis carolinensis]
Length = 194
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F TF + A AA +
Sbjct: 1 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRSGAEAAKNA 58
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 59 LNGIRFDPENPQTLRLEFAKANTKMAK 85
>gi|119583856|gb|EAW63452.1| hCG14793, isoform CRA_b [Homo sapiens]
Length = 143
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 13 PSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 70
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSR 118
A AA + LNG++FDP+ L +E A++N++
Sbjct: 71 RSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTK 104
>gi|348525747|ref|XP_003450383.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Oreochromis niloticus]
Length = 194
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P + + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 12 PSEFTNHEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 69
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSR 118
A AA + LNGV+FDP+ L +E A++N++
Sbjct: 70 RSEAEAAKNALNGVRFDPEIPQTLRLEFAKANTK 103
>gi|45382377|ref|NP_990200.1| RNA-binding protein with multiple splicing [Gallus gallus]
gi|13124483|sp|Q9W6I1.1|RBPMS_CHICK RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|4835860|gb|AAD30273.1|AF129933_1 RRM-type RNA-binding protein hermes [Gallus gallus]
Length = 200
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F TF + A AA +
Sbjct: 21 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRAGAEAAKNA 78
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 79 LNGIRFDPENPQTLRLEFAKANTKMAK 105
>gi|395541849|ref|XP_003772849.1| PREDICTED: RNA-binding protein with multiple splicing [Sarcophilus
harrisii]
Length = 188
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 29 QQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTA 88
Q + + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F + A
Sbjct: 9 QPAVDDVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEA 66
Query: 89 VAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
AA + LNG++FDP+ L +E A++N++ +
Sbjct: 67 EAAKNALNGIRFDPEIPQTLRLEFAKANTKMAK 99
>gi|449273343|gb|EMC82847.1| RNA-binding protein with multiple splicing, partial [Columba livia]
Length = 180
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F TF + A AA +
Sbjct: 1 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRAGAEAAKNA 58
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 59 LNGIRFDPENPQTLRLEFAKANTKMAK 85
>gi|224062243|ref|XP_002193531.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Taeniopygia guttata]
Length = 167
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F TF + A AA +
Sbjct: 3 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRAGAEAAKNA 60
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 61 LNGIRFDPENPQTLRLEFAKANTKMAK 87
>gi|126277363|ref|XP_001375205.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Monodelphis domestica]
Length = 257
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F TF + A AA +
Sbjct: 32 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRAGAEAAKNA 89
Query: 95 LNGVKFDPQSGSVLHIELARSNSR 118
LNG++FDP++ L +E A++N++
Sbjct: 90 LNGIRFDPENPQTLRLEFAKANTK 113
>gi|326926326|ref|XP_003209353.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Meleagris gallopavo]
Length = 204
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F TF + A AA +
Sbjct: 25 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRAGAEAAKNA 82
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 83 LNGIRFDPENPQTLRLEFAKANTKMAK 109
>gi|410912397|ref|XP_003969676.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Takifugu rubripes]
Length = 259
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F TF + A AA +
Sbjct: 89 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRSGAEAAKNA 146
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 147 LNGIRFDPENPQTLRLEFAKANTKMAK 173
>gi|410925168|ref|XP_003976053.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Takifugu rubripes]
Length = 194
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 60/95 (63%), Gaps = 5/95 (5%)
Query: 27 HHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQ 86
+H+++ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 17 NHEEE---VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRS 71
Query: 87 TAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A AA + LNGV+FDP+ L +E A++N++ +
Sbjct: 72 EAEAAKNALNGVRFDPEIPQTLRLEFAKANTKMAK 106
>gi|397515721|ref|XP_003828094.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Pan
paniscus]
Length = 230
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Query: 30 QQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAV 89
++ + + TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A
Sbjct: 46 EKFSAVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAE 103
Query: 90 AALHELNGVKFDPQSGSVLHIELARSNSR 118
AA + LNG++FDP++ L +E A++N++
Sbjct: 104 AAKNALNGIRFDPENPQTLRLEFAKANTK 132
>gi|345795064|ref|XP_853385.2| PREDICTED: RNA-binding protein with multiple splicing 2 [Canis
lupus familiaris]
Length = 214
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 34 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKNA 91
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 92 LNGIRFDPENPQTLRLEFAKANTKMAK 118
>gi|355715882|gb|AES05433.1| RNA binding protein with multiple splicing [Mustela putorius furo]
Length = 173
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F + A AA +
Sbjct: 1 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNA 58
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP+ L +E A++N++ +
Sbjct: 59 LNGIRFDPEIPQTLRLEFAKANTKMAK 85
>gi|444730929|gb|ELW71298.1| RNA-binding protein with multiple splicing 2 [Tupaia chinensis]
Length = 240
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 58/96 (60%), Gaps = 8/96 (8%)
Query: 26 YHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNH 85
+HH + TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F +
Sbjct: 22 WHH------VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSR 73
Query: 86 QTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A AA + LNG++FDP++ L +E A++N++ +
Sbjct: 74 AGAEAAKNALNGIRFDPENPQTLRLEFAKANTKMAK 109
>gi|284795211|ref|NP_001165323.1| RNA binding protein with multiple splicing [Xenopus (Silurana)
tropicalis]
Length = 195
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 32 DNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F + A AA
Sbjct: 19 EEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAA 76
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKR 121
+ LNG++FDP+ L +E A++N++ +
Sbjct: 77 KNALNGIRFDPEIPQTLRLEFAKANTKMAK 106
>gi|126330763|ref|XP_001372734.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Monodelphis domestica]
Length = 186
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F + A AA +
Sbjct: 13 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNA 70
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP+ L +E A++N++ +
Sbjct: 71 LNGIRFDPEIPQTLRLEFAKANTKMAK 97
>gi|290651751|ref|NP_001166897.1| RNA binding protein with multiple splicing 2 [Rattus norvegicus]
gi|197246487|gb|AAI69038.1| Rbpms2 protein [Rattus norvegicus]
Length = 210
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 30 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKNA 87
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 88 LNGIRFDPENPQTLRLEFAKANTKMAK 114
>gi|147903173|ref|NP_001083477.1| RNA binding protein with multiple splicing [Xenopus laevis]
gi|38014401|gb|AAH60391.1| MGC68512 protein [Xenopus laevis]
Length = 200
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F
Sbjct: 11 PPDEINLPEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFD 68
Query: 84 NHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
+ A AA + LNG++FDP+ L +E A++N++ +
Sbjct: 69 SRSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAK 106
>gi|281347320|gb|EFB22904.1| hypothetical protein PANDA_002166 [Ailuropoda melanoleuca]
Length = 163
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 2 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKNA 59
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 60 LNGIRFDPENPQTLRLEFAKANTKMAK 86
>gi|387540910|gb|AFJ71082.1| RNA-binding protein with multiple splicing 2 [Macaca mulatta]
Length = 209
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 30 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAKNA 87
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 88 LNGIRFDPENPQTLRLEFAKANTKMAK 114
>gi|301756893|ref|XP_002914317.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Ailuropoda melanoleuca]
Length = 296
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 116 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKNA 173
Query: 95 LNGVKFDPQSGSVLHIELARSNSR 118
LNG++FDP++ L +E A++N++
Sbjct: 174 LNGIRFDPENPQTLRLEFAKANTK 197
>gi|114657607|ref|XP_001174270.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Pan
troglodytes]
Length = 209
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 30 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAKNA 87
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 88 LNGIRFDPENPQTLRLEFAKANTKMAK 114
>gi|34915990|ref|NP_919248.1| RNA-binding protein with multiple splicing 2 [Homo sapiens]
gi|74762401|sp|Q6ZRY4.1|RBPS2_HUMAN RecName: Full=RNA-binding protein with multiple splicing 2
gi|34485858|gb|AAQ73311.1| RNA-binding protein with multiple splicing 2 [Homo sapiens]
gi|34534977|dbj|BAC87172.1| unnamed protein product [Homo sapiens]
gi|119598099|gb|EAW77693.1| RNA binding protein with multiple splicing 2 [Homo sapiens]
gi|225000786|gb|AAI72373.1| RNA binding protein with multiple splicing 2 [synthetic construct]
gi|261861060|dbj|BAI47052.1| RNA binding protein with multiple splicing 2 [synthetic construct]
Length = 209
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 30 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAKNA 87
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 88 LNGIRFDPENPQTLRLEFAKANTKMAK 114
>gi|355778103|gb|EHH63139.1| RNA-binding protein with multiple splicing 2, partial [Macaca
fascicularis]
Length = 181
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 2 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAKNA 59
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 60 LNGIRFDPENPQTLRLEFAKANTKMAK 86
>gi|403300512|ref|XP_003940978.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Saimiri
boliviensis boliviensis]
Length = 238
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 59 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAKNA 116
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 117 LNGIRFDPENPQTLRLEFAKANTKMAK 143
>gi|291402858|ref|XP_002718127.1| PREDICTED: RNA binding protein with multiple splicing 2
[Oryctolagus cuniculus]
Length = 210
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 30 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKNA 87
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 88 LNGIRFDPENPQTLRLEFAKANTKMAK 114
>gi|31980694|ref|NP_082306.2| RNA-binding protein with multiple splicing 2 [Mus musculus]
gi|81915124|sp|Q8VC52.1|RBPS2_MOUSE RecName: Full=RNA-binding protein with multiple splicing 2
gi|18255713|gb|AAH21788.1| RNA binding protein with multiple splicing 2 [Mus musculus]
gi|74140118|dbj|BAE33785.1| unnamed protein product [Mus musculus]
gi|74194800|dbj|BAE25995.1| unnamed protein product [Mus musculus]
gi|148694156|gb|EDL26103.1| RNA binding protein with multiple splicing 2 [Mus musculus]
Length = 206
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 24 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKNA 81
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 82 LNGIRFDPENPQTLRLEFAKANTKMAK 108
>gi|440907032|gb|ELR57225.1| RNA-binding protein with multiple splicing 2, partial [Bos
grunniens mutus]
Length = 184
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 5 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKNA 62
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 63 LNGIRFDPENPQTLRLEFAKANTKMAK 89
>gi|390468449|ref|XP_002753282.2| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Callithrix jacchus]
Length = 255
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 76 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAKNA 133
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 134 LNGIRFDPENPQTLRLEFAKANTKMAK 160
>gi|313232434|emb|CBY24102.1| unnamed protein product [Oikopleura dioica]
Length = 300
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 27 HHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV-----VAFAT 81
H ++ + TLFVSGLP DV+ RE+ LFR GF+ LK+ + +V VAF T
Sbjct: 54 HESYHNDEVRTLFVSGLPSDVKQRELRLLFRPYKGFESAVLKFPQKPGKVYPIAPVAFVT 113
Query: 82 FVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRK 122
F + A EL G KFD + + L +E A+SN++ + K
Sbjct: 114 FKSKAEAQVPKEELQGEKFDNDNPTTLRLEFAKSNTKNRMK 154
>gi|426379407|ref|XP_004056389.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Gorilla
gorilla gorilla]
Length = 214
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 35 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAKNA 92
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 93 LNGIRFDPENPQTLRLEFAKANTKMAK 119
>gi|355692793|gb|EHH27396.1| RNA-binding protein with multiple splicing 2, partial [Macaca
mulatta]
Length = 181
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 2 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAKNA 59
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 60 LNGIRFDPENPQTLRLEFAKANTKMAK 86
>gi|432919028|ref|XP_004079709.1| PREDICTED: RNA-binding protein with multiple splicing-like [Oryzias
latipes]
Length = 194
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 59/92 (64%), Gaps = 5/92 (5%)
Query: 27 HHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQ 86
+H+++ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 17 NHEEE---VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRS 71
Query: 87 TAVAALHELNGVKFDPQSGSVLHIELARSNSR 118
A AA + LNGV+FDP+ L +E A++N++
Sbjct: 72 EAEAAKNALNGVRFDPEIPQTLRLEFAKANTK 103
>gi|395822321|ref|XP_003784468.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Otolemur
garnettii]
Length = 211
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 32 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAKNA 89
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 90 LNGIRFDPENPQTLRLEFAKANTKMAK 116
>gi|194670736|ref|XP_596374.4| PREDICTED: RNA-binding protein with multiple splicing 2 [Bos
taurus]
gi|297479609|ref|XP_002690918.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Bos
taurus]
gi|296483268|tpg|DAA25383.1| TPA: RNA binding protein with multiple splicing 2-like [Bos taurus]
Length = 188
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ + TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A A
Sbjct: 5 KKKKVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEA 62
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSR 118
A + LNG++FDP++ L +E A++N++
Sbjct: 63 AKNALNGIRFDPENPQTLRLEFAKANTK 90
>gi|351695575|gb|EHA98493.1| RNA-binding protein with multiple splicing 2, partial
[Heterocephalus glaber]
Length = 180
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 2 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKNA 59
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 60 LNGIRFDPENPQTLRLEFAKANTKMAK 86
>gi|397521591|ref|XP_003830876.1| PREDICTED: RNA-binding protein with multiple splicing [Pan
paniscus]
Length = 218
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 32 DNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F + A AA
Sbjct: 59 ETFVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAA 116
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSR 118
+ LNG++FDP+ L +E A++N++
Sbjct: 117 KNALNGIRFDPEIPQTLRLEFAKANTK 143
>gi|426256354|ref|XP_004021805.1| PREDICTED: RNA-binding protein with multiple splicing [Ovis aries]
Length = 198
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F + A AA +
Sbjct: 2 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNA 59
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP+ L +E A++N++ +
Sbjct: 60 LNGIRFDPEIPQTLRLEFAKANTKMAK 86
>gi|281347421|gb|EFB23005.1| hypothetical protein PANDA_009679 [Ailuropoda melanoleuca]
gi|351701272|gb|EHB04191.1| RNA-binding protein with multiple splicing, partial [Heterocephalus
glaber]
gi|355697845|gb|EHH28393.1| hypothetical protein EGK_18822, partial [Macaca mulatta]
gi|355779616|gb|EHH64092.1| hypothetical protein EGM_17218, partial [Macaca fascicularis]
Length = 198
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F + A AA +
Sbjct: 2 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNA 59
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP+ L +E A++N++ +
Sbjct: 60 LNGIRFDPEIPQTLRLEFAKANTKMAK 86
>gi|119583862|gb|EAW63458.1| hCG2043421, isoform CRA_a [Homo sapiens]
Length = 200
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F + A AA +
Sbjct: 4 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNA 61
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP+ L +E A++N++ +
Sbjct: 62 LNGIRFDPEIPQTLRLEFAKANTKMAK 88
>gi|326918450|ref|XP_003205501.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Meleagris gallopavo]
Length = 233
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F + A AA +
Sbjct: 60 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNA 117
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP+ L +E A++N++ +
Sbjct: 118 LNGIRFDPEIPQTLRLEFAKANTKMAK 144
>gi|148703476|gb|EDL35423.1| RNA binding protein gene with multiple splicing, isoform CRA_a [Mus
musculus]
gi|148703477|gb|EDL35424.1| RNA binding protein gene with multiple splicing, isoform CRA_a [Mus
musculus]
Length = 175
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F + A AA +
Sbjct: 1 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNA 58
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP+ L +E A++N++ +
Sbjct: 59 LNGIRFDPEIPQTLRLEFAKANTKMAK 85
>gi|354474967|ref|XP_003499701.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Cricetulus griseus]
Length = 181
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F + A AA +
Sbjct: 7 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNA 64
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP+ L +E A++N++ +
Sbjct: 65 LNGIRFDPEIPQTLRLEFAKANTKMAK 91
>gi|431895918|gb|ELK05336.1| Ornithine decarboxylase antizyme 2, partial [Pteropus alecto]
Length = 320
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 3 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKNA 60
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 61 LNGIRFDPENPQTLRLEFAKANTKMAK 87
>gi|410961120|ref|XP_003987133.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Felis
catus]
Length = 204
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 24 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKNA 81
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 82 LNGIRFDPENPQTLRLEFAKANTKMAK 108
>gi|431902282|gb|ELK08783.1| RNA-binding protein with multiple splicing [Pteropus alecto]
Length = 275
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F + A AA +
Sbjct: 79 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNA 136
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP+ L +E A++N++ +
Sbjct: 137 LNGIRFDPEIPQTLRLEFAKANTKMAK 163
>gi|338717427|ref|XP_001496966.3| PREDICTED: RNA-binding protein with multiple splicing 2 [Equus
caballus]
Length = 287
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 107 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKNA 164
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 165 LNGIRFDPENPQTLRLEFAKANTKMAK 191
>gi|148703479|gb|EDL35426.1| RNA binding protein gene with multiple splicing, isoform CRA_c [Mus
musculus]
Length = 198
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F + A AA +
Sbjct: 1 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNA 58
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP+ L +E A++N++ +
Sbjct: 59 LNGIRFDPEIPQTLRLEFAKANTKMAK 85
>gi|12845642|dbj|BAB26834.1| unnamed protein product [Mus musculus]
Length = 168
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 24 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKNA 81
Query: 95 LNGVKFDPQSGSVLHIELARSNSR 118
LNG++FDP++ L +E A++N++
Sbjct: 82 LNGIRFDPENPQTLRLEFAKANTK 105
>gi|402877940|ref|XP_003902666.1| PREDICTED: RNA-binding protein with multiple splicing, partial
[Papio anubis]
Length = 268
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F + A AA +
Sbjct: 72 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNA 129
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP+ L +E A++N++ +
Sbjct: 130 LNGIRFDPEIPQTLRLEFAKANTKMAK 156
>gi|390337886|ref|XP_794412.3| PREDICTED: protein couch potato-like [Strongylocentrotus
purpuratus]
Length = 124
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT---GRGNQVVAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T G+ V F TF + A AA
Sbjct: 12 VRTLFVSGLPMDAKPRELYLLFRAYQGYEGSLLKVTSKPGKNQSPVGFVTFESRAGAEAA 71
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSR 118
L GV+FDP+ + +E A+SN++
Sbjct: 72 KQALQGVRFDPELPQTIRLEFAKSNTK 98
>gi|432092246|gb|ELK24870.1| RNA-binding protein with multiple splicing 2 [Myotis davidii]
Length = 315
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 25 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKNA 82
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP++ L +E A++N++ +
Sbjct: 83 LNGIRFDPENPQTLRLEFAKANTKMAK 109
>gi|354504963|ref|XP_003514542.1| PREDICTED: RNA-binding protein with multiple splicing 2-like,
partial [Cricetulus griseus]
Length = 181
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA +
Sbjct: 1 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKNA 58
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP + L +E A++N++ +
Sbjct: 59 LNGIRFDPDNPQTLRLEFAKANTKMAK 85
>gi|348588625|ref|XP_003480065.1| PREDICTED: RNA-binding protein with multiple splicing 2-like [Cavia
porcellus]
Length = 295
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 28 HQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQT 87
H + TLFVSGLP D++ RE++ LFR G++ +K T R Q V F F +
Sbjct: 111 HLCALGSVRTLFVSGLPMDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAG 168
Query: 88 AVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A A + LNG++FDP++ L +E A++N++ +
Sbjct: 169 AEVAKNALNGIRFDPENPQTLRLEFAKANTKMAK 202
>gi|148703478|gb|EDL35425.1| RNA binding protein gene with multiple splicing, isoform CRA_b [Mus
musculus]
Length = 227
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F + A AA +
Sbjct: 30 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNA 87
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
LNG++FDP+ L +E A++N++ +
Sbjct: 88 LNGIRFDPEIPQTLRLEFAKANTKMAK 114
>gi|322801764|gb|EFZ22361.1| hypothetical protein SINV_13372 [Solenopsis invicta]
Length = 71
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 44/60 (73%)
Query: 225 YPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKMRKL 284
+PGF+ L+M +GG PVAF ++++V A+ AM LQ S L SSDRG + IEYA+SKM ++
Sbjct: 2 FPGFSRLRMHTKGGSPVAFIEYQDVRYAAQAMATLQGSFLLSSDRGAIRIEYAKSKMAEV 61
>gi|358332433|dbj|GAA51094.1| protein couch potato, partial [Clonorchis sinensis]
Length = 413
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ T+FVSGLP D + RE++ LFR G+ LK G+ + V F TF + + A A
Sbjct: 81 VRTIFVSGLPLDAKPRELYLLFRGFKGYQSSTLKPAGKNGKPTAPVGFVTFDSREQAEDA 140
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKR 121
+ +L GVKFDP+ ++ +E AR+N++ +
Sbjct: 141 MRKLQGVKFDPEGNQLMRLEFARTNTKVTK 170
>gi|256066562|ref|XP_002570569.1| hypothetical protein [Schistosoma mansoni]
gi|360043573|emb|CCD78986.1| hypothetical protein Smp_181270.2 [Schistosoma mansoni]
Length = 529
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G+ LK G+ ++ V F TF + + A A
Sbjct: 90 VRTLFVSGLPLDAKPRELYLLFRSFKGYLSSTLKPAGKNGKLTAPVGFVTFESREQAEEA 149
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKR 121
+ +L GVKFDP + +E ARSN++ +
Sbjct: 150 MSKLQGVKFDPDGNQHMRLEFARSNTKVTK 179
Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Query: 195 EGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGF--NMLKMRARGG---MPVAFADFEEV 249
EG TLF++ L + EL + G+ + LK + G PV F FE
Sbjct: 84 EGTEHQVRTLFVSGLPLDAKPRELYLLFRSFKGYLSSTLKPAGKNGKLTAPVGFVTFESR 143
Query: 250 EQASIAMEGLQDSTLPSSDRGGMHIEYARSKMR 282
EQA AM LQ M +E+ARS +
Sbjct: 144 EQAEEAMSKLQGVKFDPDGNQHMRLEFARSNTK 176
>gi|195444819|ref|XP_002070044.1| GK11234 [Drosophila willistoni]
gi|194166129|gb|EDW81030.1| GK11234 [Drosophila willistoni]
Length = 571
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 63/154 (40%), Gaps = 53/154 (34%)
Query: 178 ATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR- 236
A + NA P N P PCSTLF+ANLG +E ELK+ S PGF L+M +
Sbjct: 257 AGSTNNATHPGN---PQIAANAPCSTLFVANLGQFVSEHELKEVFSSMPGFCRLRMHTKG 313
Query: 237 -------------------------------------------------GGMPVAFADFE 247
G PVAF +F+
Sbjct: 314 MHQITTSTLPLTLSSTATKSTSTSYSSIITNANANANANIVDSASSNTNGTSPVAFIEFK 373
Query: 248 EVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
+ A+ AM+ LQ L SSDRG + IEYA++KM
Sbjct: 374 DAPSAAQAMQHLQGKYLLSSDRGSIRIEYAKTKM 407
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 28 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 87
Query: 92 LHEL-NGVKFDPQSGSVLHIELARSNSR-KKRKP 123
+L GV+FDP + +E A+SN++ K KP
Sbjct: 88 KQDLQQGVRFDPDMPQTIRLEFAKSNTKVSKPKP 121
>gi|194743840|ref|XP_001954408.1| GF16747 [Drosophila ananassae]
gi|190627445|gb|EDV42969.1| GF16747 [Drosophila ananassae]
Length = 141
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 28 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 87
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSR 118
+L GV+FDP + +E A+SN++
Sbjct: 88 KQDLQGVRFDPDMPQTIRLEFAKSNTK 114
>gi|195348983|ref|XP_002041026.1| GM15269 [Drosophila sechellia]
gi|194122631|gb|EDW44674.1| GM15269 [Drosophila sechellia]
Length = 617
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 452 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 511
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSR-KKRKP 123
+L GV+FDP + +E A+SN++ K KP
Sbjct: 512 KQDLQGVRFDPDMPQTIRLEFAKSNTKVSKPKP 544
>gi|442619711|ref|NP_732284.5| couch potato, isoform N [Drosophila melanogaster]
gi|442619725|ref|NP_732283.5| couch potato, isoform U [Drosophila melanogaster]
gi|442619729|ref|NP_001262691.1| couch potato, isoform W [Drosophila melanogaster]
gi|442619731|ref|NP_001262692.1| couch potato, isoform X [Drosophila melanogaster]
gi|442619733|ref|NP_524844.6| couch potato, isoform Y [Drosophila melanogaster]
gi|440217570|gb|AAF55484.6| couch potato, isoform N [Drosophila melanogaster]
gi|440217577|gb|AAF55485.6| couch potato, isoform U [Drosophila melanogaster]
gi|440217579|gb|AGB96071.1| couch potato, isoform W [Drosophila melanogaster]
gi|440217580|gb|AGB96072.1| couch potato, isoform X [Drosophila melanogaster]
gi|440217581|gb|AAN13754.5| couch potato, isoform Y [Drosophila melanogaster]
Length = 606
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 441 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 500
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSR-KKRKP 123
+L GV+FDP + +E A+SN++ K KP
Sbjct: 501 KQDLQGVRFDPDMPQTIRLEFAKSNTKVSKPKP 533
>gi|195497499|ref|XP_002096126.1| GE25503 [Drosophila yakuba]
gi|194182227|gb|EDW95838.1| GE25503 [Drosophila yakuba]
Length = 1140
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 459 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 518
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSR-KKRKP 123
+L GV+FDP + +E A+SN++ K KP
Sbjct: 519 KQDLQGVRFDPDMPQTIRLEFAKSNTKVSKPKP 551
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 178 ATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARG 237
A + NA P N P PCSTLF+ANLG +E ELK+ S PGF L+M +G
Sbjct: 696 AGSTNNASHPGN---PQIAANAPCSTLFVANLGQFVSEHELKEVFSSMPGFCRLRMHTKG 752
Query: 238 GMPV 241
P+
Sbjct: 753 THPI 756
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 240 PVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
PVAF +F++ AS AM+ LQ L SSDRG + IE+ARSKM
Sbjct: 828 PVAFIEFKDPPTASQAMQQLQGKYLLSSDRGSIRIEFARSKM 869
>gi|442619717|ref|NP_001262690.1| couch potato, isoform Q [Drosophila melanogaster]
gi|440217573|gb|AGB96070.1| couch potato, isoform Q [Drosophila melanogaster]
Length = 762
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 441 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 500
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSR-KKRKP 123
+L GV+FDP + +E A+SN++ K KP
Sbjct: 501 KQDLQGVRFDPDMPQTIRLEFAKSNTKVSKPKP 533
>gi|442619715|ref|NP_001262689.1| couch potato, isoform P [Drosophila melanogaster]
gi|440217572|gb|AGB96069.1| couch potato, isoform P [Drosophila melanogaster]
Length = 841
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 441 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 500
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSR-KKRKP 123
+L GV+FDP + +E A+SN++ K KP
Sbjct: 501 KQDLQGVRFDPDMPQTIRLEFAKSNTKVSKPKP 533
>gi|1345457|emb|CAA78696.1| Cpo 61.1 [Drosophila melanogaster]
Length = 615
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 450 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 509
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSR-KKRKP 123
+L GV+FDP + +E A+SN++ K KP
Sbjct: 510 KQDLQGVRFDPDMPQTIRLEFAKSNTKVSKPKP 542
>gi|195055450|ref|XP_001994632.1| GH15012 [Drosophila grimshawi]
gi|193892395|gb|EDV91261.1| GH15012 [Drosophila grimshawi]
Length = 193
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 28 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 87
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSR-KKRKP 123
+L GV+FDP + +E A+SN++ K KP
Sbjct: 88 KQDLQGVRFDPDMPQTIRLEFAKSNTKVSKPKP 120
>gi|195157804|ref|XP_002019784.1| GL12579 [Drosophila persimilis]
gi|194116375|gb|EDW38418.1| GL12579 [Drosophila persimilis]
Length = 632
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 467 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 526
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSR-KKRKP 123
+L GV+FDP + +E A+SN++ K KP
Sbjct: 527 KQDLQGVRFDPDMPQTIRLEFAKSNTKVSKPKP 559
>gi|442619713|ref|NP_001262688.1| couch potato, isoform O [Drosophila melanogaster]
gi|440217571|gb|AGB96068.1| couch potato, isoform O [Drosophila melanogaster]
Length = 748
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 441 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 500
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSR-KKRKP 123
+L GV+FDP + +E A+SN++ K KP
Sbjct: 501 KQDLQGVRFDPDMPQTIRLEFAKSNTKVSKPKP 533
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 178 ATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM 233
A + NA P N P PCSTLF+ANLG +E ELK+ S + N LK+
Sbjct: 693 AGSTNNASHPGN---PQIAANAPCSTLFVANLGQFVSEHELKEVFSSHGNSNWLKL 745
>gi|48429205|sp|Q01617.3|CPO_DROME RecName: Full=Protein couch potato
Length = 738
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 450 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 509
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSR-KKRKP 123
+L GV+FDP + +E A+SN++ K KP
Sbjct: 510 KQDLQGVRFDPDMPQTIRLEFAKSNTKVSKPKP 542
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 178 ATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM 233
A + NA P N P PCSTLF+ANLG +E ELK+ S + N LK+
Sbjct: 683 AGSTNNASHPGN---PQIAANAPCSTLFVANLGQFVSEHELKEVFSSHGNSNWLKL 735
>gi|339260634|ref|XP_003368308.1| protein couch potato [Trichinella spiralis]
gi|316959609|gb|EFV47705.1| protein couch potato [Trichinella spiralis]
Length = 155
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 7/101 (6%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT---GRGNQVVAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T G+ + F TF + A A
Sbjct: 1 VRTLFVSGLPIDAKPRELYLLFRAYKGYESSLLKVTQKNGKATTPIGFVTFNSRAAAEEA 60
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSR----KKRKPGSGAY 128
L GVKFDP+ + +E ARSN++ K + P + AY
Sbjct: 61 KQSLQGVKFDPELPQPIRLEFARSNTKVCKPKVQSPPASAY 101
>gi|194900318|ref|XP_001979704.1| GG22582 [Drosophila erecta]
gi|190651407|gb|EDV48662.1| GG22582 [Drosophila erecta]
Length = 745
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 8/121 (6%)
Query: 8 PYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL 67
P PP HP PP H + TLFVSGLP D + RE++ LFR G++ L
Sbjct: 39 PATQPPNHPT---TKPPTSLHHLHVKWVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLL 95
Query: 68 KYTGRGNQV---VAFATFVNHQTAVAALHEL-NGVKFDPQSGSVLHIELARSNSR-KKRK 122
K T + + V F TF A AA +L GV+FDP + +E A+SN++ K K
Sbjct: 96 KVTSKNGKTASPVGFVTFHTRAGAEAAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSKPK 155
Query: 123 P 123
P
Sbjct: 156 P 156
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 178 ATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARG 237
A + NA P N P PCSTLF+ANLG +E ELK+ S PGF L+M +G
Sbjct: 301 AGSTNNASHPGN---PQIAANAPCSTLFVANLGQFVSEHELKEVFSSMPGFCRLRMHTKG 357
Query: 238 GMPV 241
P+
Sbjct: 358 THPI 361
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 240 PVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
PVAF +F++ AS AM+ +Q L SSDRG + IE+ARSKM
Sbjct: 440 PVAFIEFKDPPTASQAMQQMQGKYLLSSDRGSIRIEFARSKM 481
>gi|384493858|gb|EIE84349.1| hypothetical protein RO3G_09059 [Rhizopus delemar RA 99-880]
Length = 387
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 12/118 (10%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKY-------TGRGN--QVVAFATFVNH 85
+ T+FV G PDD++ RE N+F GF+ LK+ T N Q++ FA F
Sbjct: 38 VTTIFVVGFPDDMQEREFQNMFLFSKGFEGASLKWHCKQDEETNENNKKQMIGFARFATR 97
Query: 86 QTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYV---VIDKRTKTEAN 140
A+ A+ LNG K D + SVL E+A+ N K+ S A + I R ++ N
Sbjct: 98 SEAIEAVDILNGRKVDLEKSSVLKAEMAKKNLHIKKGTNSSATIAPMTIGTRNASQKN 155
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 178 ATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARG 237
AT S + +A + + P PC+TL++ NL + ++EL+ S G+ + R +
Sbjct: 264 ATTSLSRLAAVVDQNP------PCNTLYVGNLPSSTNQEELRSLFSKCEGYKRMSFRIKS 317
Query: 238 GM--PVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARS 279
P+ F +FE+V A+ AM LQ L +S +GG+ + ++++
Sbjct: 318 PQQGPMCFVEFEDVLYATQAMTQLQGHALSNSVKGGIRLSFSKN 361
>gi|213404620|ref|XP_002173082.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
gi|212001129|gb|EEB06789.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
Length = 595
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 51/82 (62%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL N EDEL++ S G+ L R +G P+ F +FE+V+ A+ A+ L
Sbjct: 439 PCNTLYVGNLAANTKEDELRELFSRQRGYRRLCFRTKGISPMCFVEFEDVKYATAALFEL 498
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
Q L +S +GG+ + ++++ +
Sbjct: 499 QGVCLSNSVKGGIRLSFSKNPL 520
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 71/185 (38%), Gaps = 36/185 (19%)
Query: 5 PYDPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDF 64
P P +P ++ P PP NTL+V L + + E+ LF R+ G+
Sbjct: 420 PKKPVVMPMVNTNPADQNPP----------CNTLYVGNLAANTKEDELRELFSRQRGYR- 468
Query: 65 CQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPG 124
+L + +G + F F + + A AAL EL GV + + ++ N R
Sbjct: 469 -RLCFRTKGISPMCFVEFEDVKYATAALFELQGVCLSNSVKGGIRLSFSK-NPLGVRSSA 526
Query: 125 SGAYVVIDKRT-------------KTEANVQESSSADGDSDT----------DEASPVRN 161
A V K+ +N++ +S+A D + DE S R
Sbjct: 527 DNATSVFGANLNAVCVASPAGLERKSSSNLKAASNASADKQSQSSSGSRTPEDEVSKARL 586
Query: 162 IDSAD 166
+SAD
Sbjct: 587 EESAD 591
>gi|195570023|ref|XP_002103008.1| GD19192 [Drosophila simulans]
gi|194198935|gb|EDX12511.1| GD19192 [Drosophila simulans]
Length = 221
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 56 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 115
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSR-KKRKP 123
+L GV+FDP + +E A+SN++ K KP
Sbjct: 116 KQDLQGVRFDPDMPQTIRLEFAKSNTKVSKPKP 148
>gi|260794824|ref|XP_002592407.1| hypothetical protein BRAFLDRAFT_118420 [Branchiostoma floridae]
gi|229277626|gb|EEN48418.1| hypothetical protein BRAFLDRAFT_118420 [Branchiostoma floridae]
Length = 1558
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 33 NGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAAL 92
+ + TLFVSGLP D + RE++ LFR G++ LK T + Q V F TF + A AA
Sbjct: 13 DSVRTLFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTTK--QPVGFVTFESRAGAEAAK 70
Query: 93 HELNGVKFDPQSGSVLHIELARSNSRKKR 121
L GV+FDP L +E A++N++ ++
Sbjct: 71 QALQGVRFDPDMPQTLRLEFAKANTKVQK 99
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 225 YPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
+PGF+ L++ +GG PV F +F ++ A+ AM LQ L SSDRGG+ IEYAR+KM
Sbjct: 142 FPGFSRLRLNNKGGSPVCFIEFTDIPCATQAMNALQGYVLLSSDRGGLRIEYARNKM 198
>gi|242014736|ref|XP_002428041.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512560|gb|EEB15303.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 363
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 20 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFNTRAGAEAA 79
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSR--KKRKPGSGA 127
+L GV+FDP + +E A+SN++ K ++P + +
Sbjct: 80 KQDLQGVRFDPDLPQTIRLEFAKSNTKVSKPKQPAAAS 117
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 58/134 (43%), Gaps = 52/134 (38%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLS------------------------------------ 223
PCSTLF+ANLG +E ELK+ S
Sbjct: 217 PCSTLFVANLGQFVSEHELKEIFSSHNIVVVLLCPRRLSVKYGGGGEDAIREREKVMTSR 276
Query: 224 -------------VYPGFNMLKMRARG---GMPVAFADFEEVEQASIAMEGLQDSTLPSS 267
+ PGF+ L+M A+G G PVAF +F++V A A L + L SS
Sbjct: 277 NISQKALVDCVCRILPGFSRLRMHAKGQGGGSPVAFVEFQDVRCAGHAKAALHGTFLLSS 336
Query: 268 DRGGMHIEYARSKM 281
DRG + +EYA++KM
Sbjct: 337 DRGAIRVEYAKAKM 350
>gi|428185283|gb|EKX54136.1| hypothetical protein GUITHDRAFT_100384 [Guillardia theta CCMP2712]
Length = 424
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELN 96
+LF+SG+P D RAREI+N+FR PGF + L G+ +VAF TF A+ A ++N
Sbjct: 136 SLFLSGIPYDCRAREIYNMFRLFPGFRYSTLHRNGK--ILVAFVTFETPDQAINAGRQVN 193
Query: 97 GVKFDPQSGSVLHIELARSNSRKKRKPGSGAYV 129
G +FDP L + +A S R + ++
Sbjct: 194 GTRFDPYVRLSLRVHVAHRTSTIPRDKAAKGFI 226
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQA 252
PCS LF++ + +C E+ ++PGF + G + VAF FE +QA
Sbjct: 134 PCS-LFLSGIPYDCRAREIYNMFRLFPGFRYSTLHRNGKILVAFVTFETPDQA 185
>gi|312371573|gb|EFR19722.1| hypothetical protein AND_21916 [Anopheles darlingi]
Length = 516
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 90/233 (38%), Gaps = 50/233 (21%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D + RE++ LFR G++ LK T + + +
Sbjct: 41 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTAS---------------- 84
Query: 95 LNGVKFDPQSGSVLHIELARSN---SRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDS 151
GV+FDP + +E A+SN S+ K +P + A ++ +
Sbjct: 85 -QGVRFDPDMPQTIRLEFAKSNTKVSKPKPQPNTAATAAHPALMHPLTAGPAAAELPSAA 143
Query: 152 DTDEASPVR-----------------NIDSADKGDFVTTQSERATDSGNAVAPINSEKPY 194
A+ V I A + S +P+ S
Sbjct: 144 ALQHATLVHPALHPQVPQQMQMPHPSAIHPASMHVSAGLPANHFLPSPALASPVGST--- 200
Query: 195 EGGVQP----------CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARG 237
GG QP CSTLF+ANLG +E ELK+ + PGF L++ +G
Sbjct: 201 AGGQQPPNPPLAANAPCSTLFVANLGQFVSEHELKEIFASLPGFCRLRLHTKG 253
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 239 MPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
+PVAF +F++V A+ AM LQ L SSDRG M IE+A+SKM
Sbjct: 364 VPVAFVEFKDVVSAAAAMAALQGKFLLSSDRGAMRIEFAKSKM 406
>gi|302789375|ref|XP_002976456.1| hypothetical protein SELMODRAFT_104881 [Selaginella moellendorffii]
gi|300156086|gb|EFJ22716.1| hypothetical protein SELMODRAFT_104881 [Selaginella moellendorffii]
Length = 350
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 200 PCSTLFIANLGPNCTEDELK-----QTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASI 254
PC+TLFI NLG +E EL+ Q L PGF +K+ +G V F +F +V A
Sbjct: 193 PCNTLFIGNLGEATSEAELRGLFSRQCLCSQPGFRQMKVLRQGRSTVCFIEFVDVNTAMA 252
Query: 255 AMEGLQDSTLPSSDRGGMHIEY 276
LQ + L +SDRGGM I+Y
Sbjct: 253 VHTNLQGAVLSTSDRGGMRIQY 274
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+FV G P DV+ RE+ NL R PG++ Q+ + +G+Q + FA F A+AA
Sbjct: 2 VRTIFVLGFPPDVKERELQNLLRWWPGYEASQMNF--KGDQPMGFALFSTASMAMAARDA 59
Query: 95 LNG--VKFDPQSGSVLHIELARSNSRKKR 121
L + FD + SVL E+A+ N KR
Sbjct: 60 LQASNLVFDADAKSVLRAEMAKKNLYVKR 88
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
T+F+ P+ E EL+ L +PG+ +M +G P+ FA F A A + LQ S
Sbjct: 4 TIFVLGFPPDVKERELQNLLRWWPGYEASQMNFKGDQPMGFALFSTASMAMAARDALQAS 63
Query: 263 TL 264
L
Sbjct: 64 NL 65
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 46/112 (41%), Gaps = 17/112 (15%)
Query: 1 MAHPPYDPY---------YLPPIHPPPPPVPPPPYHHQQQDN-GINTLFVSGLPDDVRAR 50
MA PYDPY P P P P +DN NTLF+ L +
Sbjct: 150 MAPAPYDPYGSYPVAQVPPPVPPPAPVAPAGYAPVQQNTKDNPPCNTLFIGNLGEATSEA 209
Query: 51 EIHNLFRR-----KPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
E+ LF R +PGF Q+K +G V F FV+ TA+A L G
Sbjct: 210 ELRGLFSRQCLCSQPGFR--QMKVLRQGRSTVCFIEFVDVNTAMAVHTNLQG 259
>gi|357611617|gb|EHJ67566.1| putative Protein couch potato [Danaus plexippus]
Length = 324
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PCSTLF+ANLG +E ELK+ S GFN L++ G PVAF +F A+ A L
Sbjct: 222 PCSTLFVANLGQFVSEHELKEIFSSCSGFNRLRLMTGGNGPVAFVEFATTRDAAAARASL 281
Query: 260 QDSTLPSSDRGGMHIEYARSK 280
Q + L SS+ + +EYAR K
Sbjct: 282 QGALLLSSES-ALQLEYARHK 301
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 32 DNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTA 88
D + TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A
Sbjct: 13 DIKVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGA 72
Query: 89 VAALHEL-NGVKFDPQSGSVLHIELARSNSRKKR 121
AA +L GV+FDP + +E A+SN++ +
Sbjct: 73 EAAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 106
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 47/111 (42%), Gaps = 8/111 (7%)
Query: 12 PPIHPPPPPVPPPPYH-----HQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQ 66
PP HP P P P H H +TLFV+ L V E+ +F GF+ +
Sbjct: 195 PPAHPSHPQHPSHPAHPGHQAHPAHTAPCSTLFVANLGQFVSEHELKEIFSSCSGFN--R 252
Query: 67 LKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNS 117
L+ GN VAF F + A AA L G S S L +E AR S
Sbjct: 253 LRLMTGGNGPVAFVEFATTRDAAAARASLQGALLL-SSESALQLEYARHKS 302
>gi|384499199|gb|EIE89690.1| hypothetical protein RO3G_14401 [Rhizopus delemar RA 99-880]
Length = 400
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 80/179 (44%), Gaps = 25/179 (13%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKY-------TGRGN--QVVAFATFVNH 85
+ T+FV G PDD++ RE N+F GF+ LK+ T N Q++ FA F
Sbjct: 38 VTTIFVVGFPDDMQEREFQNMFLFSKGFEGASLKWHCKQDEETNENNKKQMIGFARFATR 97
Query: 86 QTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVV---IDKRTKTEANVQ 142
A+ A+ LNG K D + S+L E+A+ N K+ + A + I RT + Q
Sbjct: 98 SEAIEAVDVLNGRKVDSEKSSILKAEMAKKNLHIKKGVNASATTIPLTIGTRTLS----Q 153
Query: 143 ESSSADGDS-------DTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPY 194
+SS G TD SP++ DS GD + + + G +N PY
Sbjct: 154 KSSKLAGLGYEPFSPIPTDLLSPIQ--DSFFTGDTLFNDNRSQSFDGRNNPIVNPVLPY 210
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 200 PCSTLFIANLGPNCT-EDELKQTLSVYPGFNMLKMRARGGM--PVAFADFEEVEQASIAM 256
PC+TL++ NL P CT ++EL+ S G+ + R + P+ F +FE+V AS AM
Sbjct: 293 PCNTLYVGNL-PLCTNQEELRSLFSKCLGYKRMSFRIKSQQQGPMCFVEFEDVLCASQAM 351
Query: 257 EGLQDSTLPSSDRGGMHIEYARS 279
LQ L +S +GG+ + ++++
Sbjct: 352 SQLQGFALSNSLKGGIRLSFSKN 374
>gi|391342685|ref|XP_003745646.1| PREDICTED: uncharacterized protein LOC100903800 [Metaseiulus
occidentalis]
Length = 319
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 6/99 (6%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT---GRGNQVVAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T G+ + V F TF A AA
Sbjct: 26 VRTLFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTSKNGKTSSPVGFVTFSTRAGAEAA 85
Query: 92 LHEL-NGVKFDPQSGSVLHIELARSNSR--KKRKPGSGA 127
EL GV+FDP + +E A+SN++ K ++ GA
Sbjct: 86 KQELQQGVRFDPDLPQTIRLEFAKSNTKVSKPKQSNQGA 124
>gi|19075417|ref|NP_587917.1| RNA-binding protein Scw1 [Schizosaccharomyces pombe 972h-]
gi|26399672|sp|O74452.1|SCW1_SCHPO RecName: Full=Cell wall integrity protein scw1; AltName:
Full=Strong cell wall protein 1
gi|3560261|emb|CAA20746.1| RNA-binding protein Scw1 [Schizosaccharomyces pombe]
Length = 561
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+T+++ NL P+ +E+ELK S G+ L R +G P+ F +FE + A A++ L
Sbjct: 424 PCNTIYVGNLPPSTSEEELKVLFSTQVGYKRLCFRTKGNGPMCFVEFENIPYAMEALKNL 483
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
Q L SS +GG+ + ++++ +
Sbjct: 484 QGVCLSSSIKGGIRLSFSKNPL 505
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 14 IHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRG 73
IH P P + Q+ NT++V LP E+ LF + G+ +L + +G
Sbjct: 404 IHQRIPASTPTNTNPADQNPPCNTIYVGNLPPSTSEEELKVLFSTQVGYK--RLCFRTKG 461
Query: 74 NQVVAFATFVNHQTAVAALHELNGV 98
N + F F N A+ AL L GV
Sbjct: 462 NGPMCFVEFENIPYAMEALKNLQGV 486
>gi|148529834|gb|ABQ82149.1| RNA binding protein with multiple splicing 2, partial [Equus
caballus]
Length = 177
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 39 FVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGV 98
FVSGLP D++ RE++ LFR G++ +K T R Q V F F + A AA + LNG+
Sbjct: 1 FVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKNALNGI 58
Query: 99 KFDPQSGSVLHIELARSNSRKKR 121
+FDP++ L +E A++N++ +
Sbjct: 59 RFDPENPQTLRLEFAKANTKMAK 81
>gi|328768585|gb|EGF78631.1| hypothetical protein BATDEDRAFT_90384 [Batrachochytrium
dendrobatidis JAM81]
Length = 582
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 50/82 (60%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + E+EL+Q +V GF L R R P+ F +FE V+ A+ A+ L
Sbjct: 447 PCNTLYVGNLPHDALEEELRQIFTVQSGFKRLCFRTRANGPMCFVEFESVDYATAALFQL 506
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
+ L +S +GG+ + Y+++ +
Sbjct: 507 YGNHLSNSTKGGIRLSYSKNPL 528
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKY---------TGR-GNQVVAFATFVN 84
I T+FV G P+D+ RE N+F GF+ LK TG+ Q++ FA F
Sbjct: 53 ITTIFVVGFPEDMSDREFQNMFIFSTGFEAAALKVPMPGELDEQTGQLKRQIIGFAKFRT 112
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSRK---KRKP 123
AV A LNG + D G++L E+A+ N + KR+P
Sbjct: 113 RSEAVKARDVLNGRRIDVDRGAILKAEIAKKNLKNFTTKRQP 154
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
NTL+V LP D E+ +F + GF +L + R N + F F + A AAL +L
Sbjct: 449 NTLYVGNLPHDALEEELRQIFTVQSGFK--RLCFRTRANGPMCFVEFESVDYATAALFQL 506
Query: 96 NG 97
G
Sbjct: 507 YG 508
>gi|321172607|gb|ADW77182.1| couch potato [Culex pipiens]
Length = 252
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 86 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFSTRSGAEAA 145
Query: 92 LHEL-NGVKFDPQSGSVLHIELARSNSR-KKRKP 123
+L GV+FDP + +E A+SN++ K KP
Sbjct: 146 KQDLQQGVRFDPDMPQTIRLEFAKSNTKVSKPKP 179
>gi|347966393|ref|XP_003435906.1| AGAP013145-PA [Anopheles gambiae str. PEST]
gi|333470078|gb|EGK97506.1| AGAP013145-PA [Anopheles gambiae str. PEST]
Length = 411
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 247 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFNTRAGAEAA 306
Query: 92 LHEL-NGVKFDPQSGSVLHIELARSNSR-KKRKP 123
+L GV+FDP + +E A+SN++ K KP
Sbjct: 307 KQDLQQGVRFDPDMPQTIRLEFAKSNTKVSKPKP 340
>gi|156845900|ref|XP_001645839.1| hypothetical protein Kpol_1054p28 [Vanderwaltozyma polyspora DSM
70294]
gi|156116508|gb|EDO17981.1| hypothetical protein Kpol_1054p28 [Vanderwaltozyma polyspora DSM
70294]
Length = 683
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 8/90 (8%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-----GGMPVAFADFEEVEQASI 254
PC+TL++ NL + TE EL+Q S PGF L R + G P+ F +FE+V A+
Sbjct: 560 PCNTLYVGNLPSDATEHELRQLFSSQPGFRRLSFRNKNTNGNGHGPICFVEFEDVSFATR 619
Query: 255 AMEGLQDSTLPS---SDRGGMHIEYARSKM 281
A+ L S LPS S++GG+ + ++++ +
Sbjct: 620 ALAELYGSQLPSTNVSNKGGIRLSFSKNPL 649
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGF---DFCQLKYTGRGNQVVAF 79
PPP + Q+ NTL+V LP D E+ LF +PGF F G G+ + F
Sbjct: 549 PPPANPADQNPPCNTLYVGNLPSDATEHELRQLFSSQPGFRRLSFRNKNTNGNGHGPICF 608
Query: 80 ATFVNHQTAVAALHELNGVKF 100
F + A AL EL G +
Sbjct: 609 VEFEDVSFATRALAELYGSQL 629
>gi|347966391|ref|XP_003435905.1| AGAP013145-PB [Anopheles gambiae str. PEST]
gi|333470079|gb|EGK97507.1| AGAP013145-PB [Anopheles gambiae str. PEST]
Length = 515
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 247 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFNTRAGAEAA 306
Query: 92 LHEL-NGVKFDPQSGSVLHIELARSNSR-KKRKP 123
+L GV+FDP + +E A+SN++ K KP
Sbjct: 307 KQDLQQGVRFDPDMPQTIRLEFAKSNTKVSKPKP 340
>gi|347966395|ref|XP_003435907.1| AGAP013145-PC [Anopheles gambiae str. PEST]
gi|333470080|gb|EGK97508.1| AGAP013145-PC [Anopheles gambiae str. PEST]
Length = 243
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 79 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFNTRAGAEAA 138
Query: 92 LHEL-NGVKFDPQSGSVLHIELARSNSR-KKRKP 123
+L GV+FDP + +E A+SN++ K KP
Sbjct: 139 KQDLQQGVRFDPDMPQTIRLEFAKSNTKVSKPKP 172
>gi|402588136|gb|EJW82070.1| hypothetical protein WUBG_07021, partial [Wuchereria bancrofti]
Length = 68
Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 225 YPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
YPGF L++ R VAF +F +V QA++ M LQ + SS RGG+ IEYAR++M
Sbjct: 5 YPGFTRLRLHTRNDTTVAFVEFRDVRQATLVMNALQGCRISSSHRGGIRIEYARNRM 61
>gi|302811155|ref|XP_002987267.1| hypothetical protein SELMODRAFT_125897 [Selaginella moellendorffii]
gi|300144902|gb|EFJ11582.1| hypothetical protein SELMODRAFT_125897 [Selaginella moellendorffii]
Length = 350
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLS-----VYPGFNMLKMRARGGMPVAFADFEEVEQASI 254
PC+TLFI NLG +E EL+ S PGF +K+ +G V F +F +V A
Sbjct: 193 PCNTLFIGNLGEATSEAELRGLFSRQCPCSQPGFRQMKVLRQGRSTVCFIEFVDVNTAMA 252
Query: 255 AMEGLQDSTLPSSDRGGMHIEY 276
LQ + L +SDRGGM I+Y
Sbjct: 253 VHTNLQGAVLSTSDRGGMRIQY 274
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+FV G P DV+ RE+ NL R PG++ Q+ + +G+Q + FA F A+AA
Sbjct: 2 VRTIFVLGFPPDVKERELQNLLRWWPGYEASQMNF--KGDQPMGFALFSTASMAMAARDA 59
Query: 95 LNG--VKFDPQSGSVLHIELARSNSRKKR 121
L + FD + SVL E+A+ N KR
Sbjct: 60 LQASNLVFDADAKSVLRAEMAKKNLYVKR 88
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
T+F+ P+ E EL+ L +PG+ +M +G P+ FA F A A + LQ S
Sbjct: 4 TIFVLGFPPDVKERELQNLLRWWPGYEASQMNFKGDQPMGFALFSTASMAMAARDALQAS 63
Query: 263 TL 264
L
Sbjct: 64 NL 65
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 46/112 (41%), Gaps = 17/112 (15%)
Query: 1 MAHPPYDPY---------YLPPIHPPPPPVPPPPYHHQQQDN-GINTLFVSGLPDDVRAR 50
MA PYDPY P P P P +DN NTLF+ L +
Sbjct: 150 MAPAPYDPYGSYPVAQVPPPVPPPAPVAPAGYAPVQQNTKDNPPCNTLFIGNLGEATSEA 209
Query: 51 EIHNLFRR-----KPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
E+ LF R +PGF Q+K +G V F FV+ TA+A L G
Sbjct: 210 ELRGLFSRQCPCSQPGFR--QMKVLRQGRSTVCFIEFVDVNTAMAVHTNLQG 259
>gi|170052648|ref|XP_001862318.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873473|gb|EDS36856.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 175
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 9 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFSTRSGAEAA 68
Query: 92 LHEL-NGVKFDPQSGSVLHIELARSN---SRKKRKPGSGA 127
+L GV+FDP + +E A+SN S+ K +P + A
Sbjct: 69 KQDLQQGVRFDPDMPQTIRLEFAKSNTKVSKPKPQPNTAA 108
>gi|198455332|ref|XP_001359948.2| GA16117 [Drosophila pseudoobscura pseudoobscura]
gi|198133199|gb|EAL29100.2| GA16117 [Drosophila pseudoobscura pseudoobscura]
Length = 692
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 526 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 585
Query: 92 LHEL-NGVKFDPQSGSVLHIELARSNSR-KKRKP 123
+L GV+FDP + +E A+SN++ K KP
Sbjct: 586 KQDLQQGVRFDPDMPQTIRLEFAKSNTKVSKPKP 619
>gi|442619723|ref|NP_001014631.3| couch potato, isoform T [Drosophila melanogaster]
gi|442619727|ref|NP_001163640.2| couch potato, isoform V [Drosophila melanogaster]
gi|440217576|gb|AAX52961.3| couch potato, isoform T [Drosophila melanogaster]
gi|440217578|gb|ACZ94936.2| couch potato, isoform V [Drosophila melanogaster]
Length = 607
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 441 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 500
Query: 92 LHEL-NGVKFDPQSGSVLHIELARSNSR-KKRKP 123
+L GV+FDP + +E A+SN++ K KP
Sbjct: 501 KQDLQQGVRFDPDMPQTIRLEFAKSNTKVSKPKP 534
>gi|296411285|ref|XP_002835364.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629142|emb|CAZ79521.1| unnamed protein product [Tuber melanosporum]
Length = 598
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL N TEDELK G+ L RA+ P+ F +FE++ A+ A+ L
Sbjct: 375 PCNTLYVGNLPANTTEDELKNLFCRQRGYKRLCFRAKQNGPMCFVEFEDIGMATKALTEL 434
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 435 YGRNLSTSVKGGIRLSFSKNPL 456
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP + E+ NLF R+ G+ +L + + N + F F
Sbjct: 365 PPANPADQNPPCNTLYVGNLPANTTEDELKNLFCRQRGYK--RLCFRAKQNGPMCFVEFE 422
Query: 84 NHQTAVAALHELNG 97
+ A AL EL G
Sbjct: 423 DIGMATKALTELYG 436
>gi|25012435|gb|AAN71324.1| RE20544p [Drosophila melanogaster]
Length = 194
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 28 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 87
Query: 92 LHEL-NGVKFDPQSGSVLHIELARSNSR-KKRKP 123
+L GV+FDP + +E A+SN++ K KP
Sbjct: 88 KQDLQQGVRFDPDMPQTIRLEFAKSNTKVSKPKP 121
>gi|442619719|ref|NP_732282.6| couch potato, isoform R [Drosophila melanogaster]
gi|440217574|gb|AAF55483.7| couch potato, isoform R [Drosophila melanogaster]
Length = 749
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 441 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 500
Query: 92 LHEL-NGVKFDPQSGSVLHIELARSNSR-KKRKP 123
+L GV+FDP + +E A+SN++ K KP
Sbjct: 501 KQDLQQGVRFDPDMPQTIRLEFAKSNTKVSKPKP 534
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 178 ATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM 233
A + NA P N P PCSTLF+ANLG +E ELK+ S + N LK+
Sbjct: 694 AGSTNNASHPGN---PQIAANAPCSTLFVANLGQFVSEHELKEVFSSHGNSNWLKL 746
>gi|195107387|ref|XP_001998295.1| GI23706 [Drosophila mojavensis]
gi|193914889|gb|EDW13756.1| GI23706 [Drosophila mojavensis]
Length = 609
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 443 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 502
Query: 92 LHEL-NGVKFDPQSGSVLHIELARSNSR-KKRKP 123
+L GV+FDP + +E A+SN++ K KP
Sbjct: 503 KQDLQQGVRFDPDMPQTIRLEFAKSNTKVSKPKP 536
>gi|189234175|ref|XP_968800.2| PREDICTED: similar to RE20544p [Tribolium castaneum]
Length = 187
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 25 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFNTRAGAEAA 84
Query: 92 LHEL-NGVKFDPQSGSVLHIELARSNSRKKR 121
+L GV+FDP + +E A+SN++ +
Sbjct: 85 KQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 115
>gi|328702215|ref|XP_001952194.2| PREDICTED: protein couch potato-like [Acyrthosiphon pisum]
Length = 295
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 6/98 (6%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 56 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFQTRAGAEAA 115
Query: 92 LHEL-NGVKFDPQSGSVLHIELARSNSR--KKRKPGSG 126
+L GV+FDP + +E A+SN++ K ++P +
Sbjct: 116 KQDLQQGVRFDPDMPQTIRLEFAKSNTKVSKPKQPANA 153
>gi|384498171|gb|EIE88662.1| hypothetical protein RO3G_13373 [Rhizopus delemar RA 99-880]
Length = 464
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 13/105 (12%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLK----------YTGRGN---QVVAFAT 81
I+T+FV G P+D++ RE N+F GF+ LK T N Q++ FA
Sbjct: 37 ISTIFVVGFPEDMQEREFQNMFMFSSGFEAATLKVPSSKDGEEDMTSTSNIKKQIIGFAK 96
Query: 82 FVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSG 126
F + A+ A LNG K D + G+ L E+A+ N K+ +G
Sbjct: 97 FRTRKEAIEAKDTLNGRKIDAEKGNTLKAEMAKKNLHTKKANNNG 141
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 50/84 (59%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL P+ E+ELK S G+ L R + P+ F +FE+ A+ A++ L
Sbjct: 378 PCNTLYVGNLPPDANEEELKSMFSKCAGYKRLSFRNKSNGPMCFVEFEDAIFAAQALQDL 437
Query: 260 QDSTLPSSDRGGMHIEYARSKMRK 283
+ L +S +GG+ + ++++ + K
Sbjct: 438 HGNPLSNSVKGGIRLSFSKNPLVK 461
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 18/113 (15%)
Query: 8 PYYLPPIHPPPPPVPPPPYHHQQ-------------QDNGINTLFVSGLPDDVRAREIHN 54
P L P+ PPPP + P + ++ Q+ NTL+V LP D E+ +
Sbjct: 339 PKALSPVSPPPPGILSPNHSYRSLGGMLVGSTNPADQNPPCNTLYVGNLPPDANEEELKS 398
Query: 55 LFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSV 107
+F + G+ +L + + N + F F + A AL +L+G +P S SV
Sbjct: 399 MFSKCAGYK--RLSFRNKSNGPMCFVEFEDAIFAAQALQDLHG---NPLSNSV 446
>gi|195055448|ref|XP_001994631.1| GH15023 [Drosophila grimshawi]
gi|193892394|gb|EDV91260.1| GH15023 [Drosophila grimshawi]
Length = 396
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 48/94 (51%), Gaps = 12/94 (12%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM------------PVAFADFE 247
PCSTLF+ANLG +E ELK+ S N PVAF +F
Sbjct: 113 PCSTLFVANLGQFVSEHELKEVFSSNSSINNNINNNINNNTGQQQQQQQQQHPVAFIEFN 172
Query: 248 EVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
+ A+ AM+ LQ L SSDRG + IEYA++KM
Sbjct: 173 DAPSAAQAMQQLQGKYLLSSDRGSIRIEYAKTKM 206
>gi|156837691|ref|XP_001642865.1| hypothetical protein Kpol_400p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156113441|gb|EDO15007.1| hypothetical protein Kpol_400p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 600
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-----GGMPVAFADFEEVEQASI 254
PC+TL++ NL P+ TE EL+Q S GF L R + G P+ F +FE+ A++
Sbjct: 457 PCNTLYVGNLPPDATEQELRQLFSSQQGFRRLSFRNKNSNGNGHGPMCFVEFEDASFATV 516
Query: 255 AMEGLQDSTLPS---SDRGGMHIEYARSKM 281
A+ L S LP S++GG+ + ++++ +
Sbjct: 517 ALAELYGSQLPRSTVSNKGGIRLSFSKNPL 546
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGF---DFCQLKYTGRGNQVVAF 79
PPP + Q+ NTL+V LP D +E+ LF + GF F G G+ + F
Sbjct: 446 PPPANPADQNPPCNTLYVGNLPPDATEQELRQLFSSQQGFRRLSFRNKNSNGNGHGPMCF 505
Query: 80 ATFVNHQTAVAALHELNGVKF 100
F + A AL EL G +
Sbjct: 506 VEFEDASFATVALAELYGSQL 526
>gi|254580201|ref|XP_002496086.1| ZYRO0C10164p [Zygosaccharomyces rouxii]
gi|238938977|emb|CAR27153.1| ZYRO0C10164p [Zygosaccharomyces rouxii]
Length = 745
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 8/90 (8%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-----GGMPVAFADFEEVEQASI 254
PC+TL++ NL P+ TE EL+Q S GF L R + G P+ F +FE+V A+
Sbjct: 615 PCNTLYVGNLPPDATEQELRQLFSGQQGFRRLSFRNKNSNGNGHGPMCFVEFEDVSFATR 674
Query: 255 AMEGLQDSTLP---SSDRGGMHIEYARSKM 281
A+ L S LP +S++GG+ + ++++ +
Sbjct: 675 ALAELYGSQLPRASASNKGGIRLSFSKNPL 704
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGF---DFCQLKYTGRGNQVVAF 79
PPP + Q+ NTL+V LP D +E+ LF + GF F G G+ + F
Sbjct: 604 PPPANPADQNPPCNTLYVGNLPPDATEQELRQLFSGQQGFRRLSFRNKNSNGNGHGPMCF 663
Query: 80 ATFVNHQTAVAALHELNGVKF 100
F + A AL EL G +
Sbjct: 664 VEFEDVSFATRALAELYGSQL 684
>gi|159475870|ref|XP_001696037.1| hypothetical protein CHLREDRAFT_104778 [Chlamydomonas reinhardtii]
gi|158275208|gb|EDP00986.1| predicted protein [Chlamydomonas reinhardtii]
Length = 269
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 12/104 (11%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+FV+G P DV+ RE++NL R PG++ Q+ Y G+G+ FA F + A AA +
Sbjct: 7 VRTVFVTGFPIDVKERELNNLLRFLPGYEASQMNY-GKGS-AQGFALFTSGAHARAACDQ 64
Query: 95 LNGVKFDPQSGSVLHIELARSN--------SRKKRKPGSGAYVV 130
L V+FD S L E+AR N + K+ +P SG V
Sbjct: 65 LQHVRFDENSS--LRAEMARKNMYIKDMEPNAKRARPASGMVVT 106
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TLF+ NL + E+EL+ S PGF LK+ + F +F++ A A
Sbjct: 166 PCNTLFVGNLSDSVDENELRSLFSGSPGFRQLKLMRGPKATLGFVEFDDTGSAITAHNAQ 225
Query: 260 QDSTLPSSDRGGMHIEYARS 279
Q++ L SSDRG + ++++++
Sbjct: 226 QNAMLNSSDRGPIRVQFSKN 245
>gi|313231469|emb|CBY08583.1| unnamed protein product [Oikopleura dioica]
Length = 337
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 32 DNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
++G+ TL+++GLP DV+ REI NLF+ P F+ +K + +AFATF + A +A
Sbjct: 115 EDGVRTLYIAGLPCDVKHREIRNLFQHIPEFEGAVIKSSHGHIHPIAFATFSTVEAAKSA 174
Query: 92 LHELNGVKFDPQSGSV-LHIELARSNSRKK 120
E +G + D + + L I+ A+SN++ +
Sbjct: 175 KLEYSGYQMDIDNAELKLKIDFAKSNTKNR 204
>gi|365989942|ref|XP_003671801.1| hypothetical protein NDAI_0H03850 [Naumovozyma dairenensis CBS 421]
gi|343770574|emb|CCD26558.1| hypothetical protein NDAI_0H03850 [Naumovozyma dairenensis CBS 421]
Length = 742
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-------GGMPVAFADFEEVEQA 252
PC+TL++ NL P+ TE+EL+Q S GF L R + G P+ F +FE++ A
Sbjct: 624 PCNTLYVGNLPPDATENELRQLFSCQNGFRRLSFRNKNTNGHGHGHGPMCFVEFEDINFA 683
Query: 253 SIAMEGLQDSTLPS---SDRGGMHIEYARSKM 281
+ A+ L S LP S +GG+ + ++++ +
Sbjct: 684 TQALGELYGSQLPRATLSSKGGIRLSFSKNPL 715
>gi|342882619|gb|EGU83235.1| hypothetical protein FOXB_06235 [Fusarium oxysporum Fo5176]
Length = 454
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + E+ELK S G+ L R +G P+ F +FE++ AS A+ L
Sbjct: 295 PCNTLYVGNLPMDTAEEELKTLFSKQRGYKRLCFRTKGNGPMCFVEFEDIPFASKALTEL 354
Query: 260 QDSTLPSSDRGGMHIEYARS 279
L +S++GG+ + ++++
Sbjct: 355 YGKLLSNSNKGGIRLSFSKN 374
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
Q+ NTL+V LP D E+ LF ++ G+ +L + +GN + F F + A
Sbjct: 292 QNPPCNTLYVGNLPMDTAEEELKTLFSKQRGYK--RLCFRTKGNGPMCFVEFEDIPFASK 349
Query: 91 ALHELNG 97
AL EL G
Sbjct: 350 ALTELYG 356
>gi|367003990|ref|XP_003686728.1| hypothetical protein TPHA_0H00860 [Tetrapisispora phaffii CBS 4417]
gi|357525030|emb|CCE64294.1| hypothetical protein TPHA_0H00860 [Tetrapisispora phaffii CBS 4417]
Length = 588
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMR-----ARGGMPVAFADFEEVEQASI 254
PC+TL++ NL P+ TE EL+Q S PGF L R G P+ F +F++V A++
Sbjct: 449 PCNTLYVGNLPPDATEQELRQLFSSQPGFRRLSFRNKNNNGNGHGPMCFVEFDDVSFATV 508
Query: 255 AMEGLQDSTLPS---SDRGGMHIEYARSKM 281
A+ L LP S++GG+ + ++++ +
Sbjct: 509 ALAELYGRQLPRPVISNKGGIRLSFSKNPL 538
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGF---DFCQLKYTGRGNQVVAF 79
PPP + Q+ NTL+V LP D +E+ LF +PGF F G G+ + F
Sbjct: 438 PPPANPADQNPPCNTLYVGNLPPDATEQELRQLFSSQPGFRRLSFRNKNNNGNGHGPMCF 497
Query: 80 ATFVNHQTAVAALHELNG 97
F + A AL EL G
Sbjct: 498 VEFDDVSFATVALAELYG 515
>gi|429327511|gb|AFZ79271.1| U1/2 small nuclear ribonucleoprotein, putative [Babesia equi]
Length = 207
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 97/253 (38%), Gaps = 68/253 (26%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKY----------TGRGNQVVAFATFVNH 85
TL+V+ L D + RE+ L FC Y T RG AF F
Sbjct: 13 QTLYVTNLDDQIHVRELVKLLYEL----FCPYGYIIDIVARKTKTLRGQ---AFIVFSEI 65
Query: 86 QTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESS 145
+A AAL LNG + +++ +++ S K KP Y I K +K +A
Sbjct: 66 TSATAALKGLNGRSILAKKIKIVY---SKNKSYKAMKPSD--YYRIGKISKLQAK----- 115
Query: 146 SADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLF 205
PV ++ +KP E + TLF
Sbjct: 116 ------------PV-------------------------ISSTTEDKPAEASSKESHTLF 138
Query: 206 IANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLP 265
+ N+ P+ +D ++ + YPGF R G VAF DF V QA A++GLQ +
Sbjct: 139 VENIPPDINKDGVELLFNQYPGFK--GCRFIEGRCVAFIDFALVSQAEAALQGLQGFRM- 195
Query: 266 SSDRGGMHIEYAR 278
S +HI +A+
Sbjct: 196 -SHNHALHISFAK 207
>gi|345562989|gb|EGX45995.1| hypothetical protein AOL_s00112g12 [Arthrobotrys oligospora ATCC
24927]
Length = 632
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL N +EDELK S G+ L R + P+ F +FE+V A+ A+ L
Sbjct: 416 PCNTLYVGNLPANTSEDELKALFSRQRGYKRLCFRTKANGPMCFVEFEDVAYATRALTEL 475
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 476 YGRGLSNSVKGGIRLSFSKNPL 497
>gi|255711664|ref|XP_002552115.1| KLTH0B07546p [Lachancea thermotolerans]
gi|238933493|emb|CAR21677.1| KLTH0B07546p [Lachancea thermotolerans CBS 6340]
Length = 639
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-----GGMPVAFADFEEVEQASI 254
PC+TL++ NL P+ TE EL+Q S GF L R + G P+ F +FE+V A+
Sbjct: 519 PCNTLYVGNLPPDATEHELRQLFSTQKGFRRLSFRNKNTNGNGHGPMCFVEFEDVAHATR 578
Query: 255 AMEGLQDSTLPSS-----DRGGMHIEYARSKM 281
A+ L LP S ++GG+ + ++++ +
Sbjct: 579 ALAELYGRQLPRSGTSHNNKGGIRLSFSKNPL 610
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGF---DFCQLKYTGRGNQVVAF 79
PPP + Q+ NTL+V LP D E+ LF + GF F G G+ + F
Sbjct: 508 PPPANPADQNPPCNTLYVGNLPPDATEHELRQLFSTQKGFRRLSFRNKNTNGNGHGPMCF 567
Query: 80 ATFVNHQTAVAALHELNGVKFDPQSGS 106
F + A AL EL G + P+SG+
Sbjct: 568 VEFEDVAHATRALAELYGRQL-PRSGT 593
>gi|320589895|gb|EFX02351.1| RNA-binding protein [Grosmannia clavigera kw1407]
Length = 562
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 50/82 (60%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ N+ + +E+ELK S G+ L +R++G P+ F +FE++ A+ + L
Sbjct: 346 PCNTLYVGNIPMDTSEEELKALFSKQRGYKRLSVRSKGNGPMCFVEFEDISFATKTLYEL 405
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
+ L S RGG+ + ++++ +
Sbjct: 406 YGAALRGSTRGGIRLSFSKNPL 427
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
NTL+V +P D E+ LF ++ G+ +L +GN + F F + A L+EL
Sbjct: 348 NTLYVGNIPMDTSEEELKALFSKQRGYK--RLSVRSKGNGPMCFVEFEDISFATKTLYEL 405
Query: 96 NGVKF 100
G
Sbjct: 406 YGAAL 410
>gi|297608262|ref|NP_001061371.2| Os08g0249400 [Oryza sativa Japonica Group]
gi|255678286|dbj|BAF23285.2| Os08g0249400, partial [Oryza sativa Japonica Group]
Length = 95
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 207 ANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPS 266
NLG E+EL+ SV PG+ +K+ + V F +FE+V AS LQ + +PS
Sbjct: 1 GNLGETVIEEELRSLFSVQPGYKQMKVLRQDRNTVCFIEFEDVNAASAVHHNLQGAVIPS 60
Query: 267 SDRGGMHIEYARS 279
S RGGM I+++++
Sbjct: 61 SGRGGMRIQFSKN 73
>gi|336275323|ref|XP_003352414.1| hypothetical protein SMAC_01248 [Sordaria macrospora k-hell]
gi|380094302|emb|CCC07681.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 575
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +E+ELK S G+ L R + P+ F +FE+V A+ A+ L
Sbjct: 390 PCNTLYVGNLPIDTSEEELKAVFSKVRGYKRLCYRTKHNGPMCFVEFEDVSFATKALNEL 449
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
TL +S +GGM + ++++ +
Sbjct: 450 YGHTLSNSRKGGMRLSFSKNPL 471
>gi|50555840|ref|XP_505328.1| YALI0F12375p [Yarrowia lipolytica]
gi|49651198|emb|CAG78135.1| YALI0F12375p [Yarrowia lipolytica CLIB122]
Length = 625
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL N TE+EL Q S G+ L R + P+ F +FE V AS A+ L
Sbjct: 512 PCNTLYVGNLPMNTTEEELMQLFSKQKGYKRLCFRTKMNGPMCFVEFENVMYASKALNEL 571
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L S +GG+ + ++++ +
Sbjct: 572 YGKGLKYSVKGGIRLSFSKNPL 593
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP + E+ LF ++ G+ +L + + N + F F
Sbjct: 502 PPANPADQNPPCNTLYVGNLPMNTTEEELMQLFSKQKGYK--RLCFRTKMNGPMCFVEFE 559
Query: 84 NHQTAVAALHEL--NGVKFDPQSGSVLHI 110
N A AL+EL G+K+ + G L
Sbjct: 560 NVMYASKALNELYGKGLKYSVKGGIRLSF 588
>gi|366992418|ref|XP_003675974.1| hypothetical protein NCAS_0D00290 [Naumovozyma castellii CBS 4309]
gi|342301840|emb|CCC69610.1| hypothetical protein NCAS_0D00290 [Naumovozyma castellii CBS 4309]
Length = 626
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-----GGMPVAFADFEEVEQASI 254
PC+TL++ NL P+ TE EL+Q S GF L R + G P+ F +FE++ A+
Sbjct: 514 PCNTLYVGNLPPDATEQELRQLFSSQEGFRRLSFRNKNTNGHGHGPMCFVEFEDISFATR 573
Query: 255 AMEGLQDSTLPS---SDRGGMHIEYARSKM 281
A+ L S LP S +GG+ + ++++ +
Sbjct: 574 ALAELYGSQLPRPSLSSKGGIRLSFSKNPL 603
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGF---DFCQLKYTGRGNQVVAF 79
PPP + Q+ NTL+V LP D +E+ LF + GF F G G+ + F
Sbjct: 503 PPPANPADQNPPCNTLYVGNLPPDATEQELRQLFSSQEGFRRLSFRNKNTNGHGHGPMCF 562
Query: 80 ATFVNHQTAVAALHELNGVKF 100
F + A AL EL G +
Sbjct: 563 VEFEDISFATRALAELYGSQL 583
>gi|85114567|ref|XP_964717.1| hypothetical protein NCU00556 [Neurospora crassa OR74A]
gi|28926509|gb|EAA35481.1| hypothetical protein NCU00556 [Neurospora crassa OR74A]
Length = 530
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +E+ELK S G+ L R + P+ F +FE+V A+ A+ L
Sbjct: 345 PCNTLYVGNLPIDTSEEELKAVFSKVRGYKRLCYRTKHNGPMCFVEFEDVSFATKALNEL 404
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
TL +S +GGM + ++++ +
Sbjct: 405 YGHTLSNSRKGGMRLSFSKNPL 426
>gi|336465288|gb|EGO53528.1| hypothetical protein NEUTE1DRAFT_92899 [Neurospora tetrasperma FGSC
2508]
gi|350295585|gb|EGZ76562.1| hypothetical protein NEUTE2DRAFT_98501 [Neurospora tetrasperma FGSC
2509]
Length = 530
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +E+ELK S G+ L R + P+ F +FE+V A+ A+ L
Sbjct: 345 PCNTLYVGNLPIDTSEEELKAVFSKVRGYKRLCYRTKHNGPMCFVEFEDVSFATKALNEL 404
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
TL +S +GGM + ++++ +
Sbjct: 405 YGHTLSNSRKGGMRLSFSKNPL 426
>gi|19075222|ref|NP_587722.1| RNA-binding protein Mde7 [Schizosaccharomyces pombe 972h-]
gi|74676013|sp|O59784.1|MDE7_SCHPO RecName: Full=RNA-binding protein mde7; AltName:
Full=Mei4-dependent protein 7
gi|2995369|emb|CAA18309.1| RNA-binding protein Mde7 [Schizosaccharomyces pombe]
Length = 761
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+T+++ NL E +L+ S G+ L + +G P+ F +FEEV A+ AME +
Sbjct: 600 PCNTIYVGNLSNPDQEKKLRLAFSKEKGYRRLCFKIKGNSPMCFVEFEEVCHAAKAMEKM 659
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
Q + L +GG+ + Y+++ +
Sbjct: 660 QGAALDDKIKGGIRLSYSKNPL 681
>gi|449297722|gb|EMC93739.1| hypothetical protein BAUCODRAFT_48247, partial [Baudoinia
compniacensis UAMH 10762]
Length = 444
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL N +EDELK S G+ L R + P+ F +FE+V A+ A+ L
Sbjct: 304 PCNTLYVGNLPINTSEDELKAIFSRQRGYKRLCFRTKQNGPMCFVEFEDVGFATRALNDL 363
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 364 YGFVLSNSVKGGIRLSFSKNPL 385
>gi|119479645|ref|XP_001259851.1| RNA binding protein [Neosartorya fischeri NRRL 181]
gi|119408005|gb|EAW17954.1| RNA binding protein [Neosartorya fischeri NRRL 181]
Length = 616
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL P+ +E+ELK S G+ L R + P+ F +F+EV AS A+ L
Sbjct: 405 PCNTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFDEVAMASKALNEL 464
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S++ G+ + ++++ +
Sbjct: 465 YGYKLSNSNKTGIRLSFSKNPL 486
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
NTL+V LP D E+ LF ++ G+ +L + + N + F F A AL+E
Sbjct: 406 CNTLYVGNLPPDTSEEELKALFSKQRGYK--RLCFRNKQNGPMCFVEFDEVAMASKALNE 463
Query: 95 LNGVKFDPQSGSVLHIELAR 114
L G K + + + + ++
Sbjct: 464 LYGYKLSNSNKTGIRLSFSK 483
>gi|401842199|gb|EJT44453.1| WHI4-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 651
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 15/97 (15%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGG----------MPVAFADFEEV 249
PC+TL++ NL P+ TE EL+Q S PGF L R + P+ F +FE+V
Sbjct: 532 PCNTLYVGNLPPDATEQELRQLFSNQPGFRRLSFRNKMNSHGHGNGHGHGPICFVEFEDV 591
Query: 250 EQASIAMEGLQDSTLPS-----SDRGGMHIEYARSKM 281
A+ A+ L S LP +++GG+ + ++++ +
Sbjct: 592 SFATRALAELYGSQLPHPRSSLNNKGGIRLSFSKNPL 628
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV------ 76
PPP + Q+ NTL+V LP D +E+ LF +PGF +L + + N
Sbjct: 521 PPPANPADQNPPCNTLYVGNLPPDATEQELRQLFSNQPGFR--RLSFRNKMNSHGHGNGH 578
Query: 77 ----VAFATFVNHQTAVAALHELNGVKF 100
+ F F + A AL EL G +
Sbjct: 579 GHGPICFVEFEDVSFATRALAELYGSQL 606
>gi|365757759|gb|EHM99639.1| Whi4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 651
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 15/97 (15%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGG----------MPVAFADFEEV 249
PC+TL++ NL P+ TE EL+Q S PGF L R + P+ F +FE+V
Sbjct: 532 PCNTLYVGNLPPDATEQELRQLFSNQPGFRRLSFRNKMNSHGHGNGHGHGPICFVEFEDV 591
Query: 250 EQASIAMEGLQDSTLPS-----SDRGGMHIEYARSKM 281
A+ A+ L S LP +++GG+ + ++++ +
Sbjct: 592 SFATRALAELYGSQLPHPRSSLNNKGGIRLSFSKNPL 628
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV------ 76
PPP + Q+ NTL+V LP D +E+ LF +PGF +L + + N
Sbjct: 521 PPPANPADQNPPCNTLYVGNLPPDATEQELRQLFSNQPGFR--RLSFRNKMNSHGHGNGH 578
Query: 77 ----VAFATFVNHQTAVAALHELNGVKF 100
+ F F + A AL EL G +
Sbjct: 579 GHGPICFVEFEDVSFATRALAELYGSQL 606
>gi|367008274|ref|XP_003678637.1| hypothetical protein TDEL_0A00940 [Torulaspora delbrueckii]
gi|359746294|emb|CCE89426.1| hypothetical protein TDEL_0A00940 [Torulaspora delbrueckii]
Length = 682
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-----GGMPVAFADFEEVEQASI 254
PC+TL++ NL P+ TE EL+ S GF L R + G P+ F +FE+V A+
Sbjct: 551 PCNTLYVGNLPPDTTEQELRHLFSGQQGFRRLSFRNKNSNGNGHGPMCFVEFEDVSFATR 610
Query: 255 AMEGLQDSTLP---SSDRGGMHIEYARSKM 281
A+ L S LP +S++GG+ + ++++ +
Sbjct: 611 ALAELYGSQLPRASASNKGGIRLSFSKNPL 640
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGF---DFCQLKYTGRGNQVVAFA 80
PP + Q+ NTL+V LP D +E+ +LF + GF F G G+ + F
Sbjct: 541 PPANPADQNPPCNTLYVGNLPPDTTEQELRHLFSGQQGFRRLSFRNKNSNGNGHGPMCFV 600
Query: 81 TFVNHQTAVAALHELNGVKF 100
F + A AL EL G +
Sbjct: 601 EFEDVSFATRALAELYGSQL 620
>gi|258570691|ref|XP_002544149.1| predicted protein [Uncinocarpus reesii 1704]
gi|237904419|gb|EEP78820.1| predicted protein [Uncinocarpus reesii 1704]
Length = 603
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 50/82 (60%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL P+ +EDELK S G+ + R + P+ F +F+++ A+ +++ L
Sbjct: 390 PCNTLYVGNLPPDTSEDELKALFSKQRGYKRMIFRQKPNGPICFVEFDDISWATKSLKEL 449
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 450 YGYELSNSIKGGIRLSFSKNPL 471
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ LF ++ G+ ++ + + N + F F
Sbjct: 380 PPVNPADQNPPCNTLYVGNLPPDTSEDELKALFSKQRGYK--RMIFRQKPNGPICFVEFD 437
Query: 84 NHQTAVAALHELNGVKF 100
+ A +L EL G +
Sbjct: 438 DISWATKSLKELYGYEL 454
>gi|367007687|ref|XP_003688573.1| hypothetical protein TPHA_0O01720 [Tetrapisispora phaffii CBS 4417]
gi|357526882|emb|CCE66139.1| hypothetical protein TPHA_0O01720 [Tetrapisispora phaffii CBS 4417]
Length = 619
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMR-----ARGGMPVAFADFEEVEQASI 254
PC+TL++ NL + TE EL+Q SV GF L R G P+ F +F++V A+
Sbjct: 497 PCNTLYVGNLPSDATEQELRQLFSVQQGFRRLSFRNKNNNGNGHGPICFVEFDDVSFATR 556
Query: 255 AMEGLQDSTLPS---SDRGGMHIEYARSKM 281
A+ L S LPS S++GG+ + ++++ +
Sbjct: 557 ALAELYGSQLPSATVSNKGGIRLSFSKNPL 586
>gi|303320063|ref|XP_003070031.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109717|gb|EER27886.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 615
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 50/82 (60%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL P+ +EDELK S G+ + R + P+ F +F+++ A+ +++ L
Sbjct: 401 PCNTLYVGNLPPDTSEDELKALFSRQRGYKRMIFRQKPNGPICFVEFDDISWATKSLKEL 460
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 461 YGYELSNSIKGGIRLSFSKNPL 482
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ LF R+ G+ ++ + + N + F F
Sbjct: 391 PPVNPADQNPPCNTLYVGNLPPDTSEDELKALFSRQRGYK--RMIFRQKPNGPICFVEFD 448
Query: 84 NHQTAVAALHELNGVKF 100
+ A +L EL G +
Sbjct: 449 DISWATKSLKELYGYEL 465
>gi|320031854|gb|EFW13811.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 615
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 50/82 (60%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL P+ +EDELK S G+ + R + P+ F +F+++ A+ +++ L
Sbjct: 401 PCNTLYVGNLPPDTSEDELKALFSRQRGYKRMIFRQKPNGPICFVEFDDISWATKSLKEL 460
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 461 YGYELSNSIKGGIRLSFSKNPL 482
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ LF R+ G+ ++ + + N + F F
Sbjct: 391 PPVNPADQNPPCNTLYVGNLPPDTSEDELKALFSRQRGYK--RMIFRQKPNGPICFVEFD 448
Query: 84 NHQTAVAALHELNGVKF 100
+ A +L EL G +
Sbjct: 449 DISWATKSLKELYGYEL 465
>gi|119183856|ref|XP_001242909.1| hypothetical protein CIMG_06805 [Coccidioides immitis RS]
gi|392865813|gb|EAS31646.2| RNA binding protein [Coccidioides immitis RS]
Length = 615
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 50/82 (60%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL P+ +EDELK S G+ + R + P+ F +F+++ A+ +++ L
Sbjct: 401 PCNTLYVGNLPPDTSEDELKALFSRQRGYKRMIFRQKPNGPICFVEFDDISWATKSLKEL 460
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 461 YGYELSNSIKGGIRLSFSKNPL 482
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ LF R+ G+ ++ + + N + F F
Sbjct: 391 PPVNPADQNPPCNTLYVGNLPPDTSEDELKALFSRQRGYK--RMIFRQKPNGPICFVEFD 448
Query: 84 NHQTAVAALHELNGVKF 100
+ A +L EL G +
Sbjct: 449 DISWATKSLKELYGYEL 465
>gi|410075513|ref|XP_003955339.1| hypothetical protein KAFR_0A07700 [Kazachstania africana CBS 2517]
gi|372461921|emb|CCF56204.1| hypothetical protein KAFR_0A07700 [Kazachstania africana CBS 2517]
Length = 571
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 8/90 (8%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-----GGMPVAFADFEEVEQASI 254
PC+TL++ NL P+ TE EL+Q S GF L + + G P+ F +F++V A+
Sbjct: 440 PCNTLYVGNLPPDATEQELRQLFSKQQGFRRLSFKNKSSNGNGHGPMCFVEFDDVSFATR 499
Query: 255 AMEGLQDSTLP---SSDRGGMHIEYARSKM 281
A+ L S LP +S++GG+ + ++++ +
Sbjct: 500 ALAELYGSQLPRTTTSNKGGIRLSFSKNPL 529
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGF---DFCQLKYTGRGNQVVAF 79
PPP + Q+ NTL+V LP D +E+ LF ++ GF F G G+ + F
Sbjct: 429 PPPANPADQNPPCNTLYVGNLPPDATEQELRQLFSKQQGFRRLSFKNKSSNGNGHGPMCF 488
Query: 80 ATFVNHQTAVAALHELNGVKF 100
F + A AL EL G +
Sbjct: 489 VEFDDVSFATRALAELYGSQL 509
>gi|402579243|gb|EJW73195.1| hypothetical protein WUBG_15898, partial [Wuchereria bancrofti]
Length = 419
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT----GRGNQVVAFATFVNHQTAVA 90
+ TLFVSGLP D + RE++ LFR G++ L+ T G V F TF + + A
Sbjct: 38 VRTLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSKDGGIASPVGFVTFSSAEDAEI 97
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSR 118
A+ L FDP +G + +E A+SN++
Sbjct: 98 AMKALQSALFDPITGHKIRLEKAKSNTK 125
>gi|164659532|ref|XP_001730890.1| hypothetical protein MGL_1889 [Malassezia globosa CBS 7966]
gi|159104788|gb|EDP43676.1| hypothetical protein MGL_1889 [Malassezia globosa CBS 7966]
Length = 649
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 57/142 (40%), Gaps = 49/142 (34%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKY------------------------- 69
I+TLF++G P+D+ RE N+F GF+ LKY
Sbjct: 192 ISTLFLAGFPEDITDREFSNMFLFAKGFEASMLKYPNTNAVQQLKPDEVEARRAADKRVS 251
Query: 70 --TGRG-------------------NQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVL 108
TG G Q++ FA F + A+ A LNG + D + G +L
Sbjct: 252 GPTGLGAEKEGAGRDASDPQPSPKSKQIIGFAKFSCREEALQARDVLNGFRIDSERGCIL 311
Query: 109 HIELARSNSRKKRKPGSGAYVV 130
ELA+ N KR S +YVV
Sbjct: 312 KAELAKKNLHTKR---SASYVV 330
>gi|70998148|ref|XP_753803.1| RNA binding protein [Aspergillus fumigatus Af293]
gi|66851439|gb|EAL91765.1| RNA binding protein [Aspergillus fumigatus Af293]
gi|159126462|gb|EDP51578.1| RNA binding protein [Aspergillus fumigatus A1163]
Length = 616
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL P+ +E+ELK S G+ L R + P+ F +F+EV AS A+ L
Sbjct: 405 PCNTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFDEVAMASKALNEL 464
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S + G+ + ++++ +
Sbjct: 465 YGYKLSNSTKTGIRLSFSKNPL 486
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
NTL+V LP D E+ LF ++ G+ +L + + N + F F A AL+E
Sbjct: 406 CNTLYVGNLPPDTSEEELKALFSKQRGYK--RLCFRNKQNGPMCFVEFDEVAMASKALNE 463
Query: 95 LNGVKFDPQSGSVLHIELAR 114
L G K + + + + ++
Sbjct: 464 LYGYKLSNSTKTGIRLSFSK 483
>gi|346326538|gb|EGX96134.1| RNA binding protein [Cordyceps militaris CM01]
Length = 444
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +E+ELK S G+ L R + P+ F +FE+V A+ A+ L
Sbjct: 274 PCNTLYVGNLPSDTSEEELKAMFSKQRGYKRLCFRTKSNGPMCFVEFEDVSFATKALHEL 333
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 334 YGHPLHNSTKGGIRLSFSKNPL 355
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 15 HPPPPPVP-PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRG 73
HPP P PPP + Q+ NTL+V LP D E+ +F ++ G+ +L + +
Sbjct: 254 HPPGSHHPRPPPANPADQNPPCNTLYVGNLPSDTSEEELKAMFSKQRGYK--RLCFRTKS 311
Query: 74 NQVVAFATFVNHQTAVAALHELNG 97
N + F F + A ALHEL G
Sbjct: 312 NGPMCFVEFEDVSFATKALHELYG 335
>gi|296816757|ref|XP_002848715.1| RNA binding protein [Arthroderma otae CBS 113480]
gi|238839168|gb|EEQ28830.1| RNA binding protein [Arthroderma otae CBS 113480]
Length = 621
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL P+ +EDELK S G+ + R + P+ F +FE+V A+ + L
Sbjct: 397 PCNTLYVGNLPPDTSEDELKALFSRQRGYKRMIFRQKPNGPICFVEFEDVSFATKCLTEL 456
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 457 YGYELSNSVKGGIRLSFSKNPL 478
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ LF R+ G+ ++ + + N + F F
Sbjct: 387 PPVNPADQNPPCNTLYVGNLPPDTSEDELKALFSRQRGYK--RMIFRQKPNGPICFVEFE 444
Query: 84 NHQTAVAALHELNGVKF 100
+ A L EL G +
Sbjct: 445 DVSFATKCLTELYGYEL 461
>gi|50311967|ref|XP_456015.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645151|emb|CAG98723.1| KLLA0F20834p [Kluyveromyces lactis]
Length = 616
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-----GGMPVAFADFEEVEQASI 254
PC+TL++ NL P+ TE EL+Q GF L R + G P+ F +FE+V A+
Sbjct: 447 PCNTLYVGNLPPDATEQELRQLFGGQKGFKRLSFRNKNNNNSGHGPMCFVEFEDVAHATR 506
Query: 255 AMEGLQDSTLPS-----SDRGGMHIEYARSKM 281
A+ L S LP + +GG+ + ++++ +
Sbjct: 507 ALAELYGSQLPRPVGAHNTKGGIRLSFSKNPL 538
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGF---DFCQLKYTGRGNQVVAF 79
PPP + Q+ NTL+V LP D +E+ LF + GF F G+ + F
Sbjct: 436 PPPANPADQNPPCNTLYVGNLPPDATEQELRQLFGGQKGFKRLSFRNKNNNNSGHGPMCF 495
Query: 80 ATFVNHQTAVAALHELNGVKF 100
F + A AL EL G +
Sbjct: 496 VEFEDVAHATRALAELYGSQL 516
>gi|326479306|gb|EGE03316.1| RNA binding protein [Trichophyton equinum CBS 127.97]
Length = 543
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL P+ +EDELK S G+ + R + P+ F +FE+V A+ + L
Sbjct: 338 PCNTLYVGNLPPDTSEDELKALFSRQRGYKRMIFRQKPNGPICFVEFEDVSFATKCLTEL 397
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 398 YGYELSNSVKGGIRLSFSKNPL 419
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ LF R+ G+ ++ + + N + F F
Sbjct: 328 PPVNPADQNPPCNTLYVGNLPPDTSEDELKALFSRQRGYK--RMIFRQKPNGPICFVEFE 385
Query: 84 NHQTAVAALHELNGVKF 100
+ A L EL G +
Sbjct: 386 DVSFATKCLTELYGYEL 402
>gi|327293680|ref|XP_003231536.1| RNA binding protein [Trichophyton rubrum CBS 118892]
gi|326466164|gb|EGD91617.1| RNA binding protein [Trichophyton rubrum CBS 118892]
Length = 556
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL P+ +EDELK S G+ + R + P+ F +FE+V A+ + L
Sbjct: 327 PCNTLYVGNLPPDTSEDELKALFSRQRGYKRMIFRQKPNGPICFVEFEDVSFATKCLTEL 386
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 387 YGYELSNSVKGGIRLSFSKNPL 408
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ LF R+ G+ ++ + + N + F F
Sbjct: 317 PPVNPADQNPPCNTLYVGNLPPDTSEDELKALFSRQRGYK--RMIFRQKPNGPICFVEFE 374
Query: 84 NHQTAVAALHELNGVKF 100
+ A L EL G +
Sbjct: 375 DVSFATKCLTELYGYEL 391
>gi|302921099|ref|XP_003053217.1| hypothetical protein NECHADRAFT_67581 [Nectria haematococca mpVI
77-13-4]
gi|256734157|gb|EEU47504.1| hypothetical protein NECHADRAFT_67581 [Nectria haematococca mpVI
77-13-4]
Length = 574
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +E+ELK G+ L R + P+ F +FEEV A+ A+ L
Sbjct: 290 PCNTLYVGNLPADTSEEELKALFIKQRGYKRLCFRTKANGPMCFVEFEEVSFATKALHDL 349
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 350 YGHPLHNSTKGGIRLSFSKNPL 371
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ LF ++ G+ +L + + N + F F
Sbjct: 280 PPVNPADQNPPCNTLYVGNLPADTSEEELKALFIKQRGYK--RLCFRTKANGPMCFVEFE 337
Query: 84 NHQTAVAALHELNG 97
A ALH+L G
Sbjct: 338 EVSFATKALHDLYG 351
>gi|255949550|ref|XP_002565542.1| Pc22g16260 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592559|emb|CAP98914.1| Pc22g16260 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 602
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL P+ +E+ELK S G+ L R + P+ F +F+EV AS A+ L
Sbjct: 389 PCNTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFDEVAMASKALNEL 448
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S + G+ + ++++ +
Sbjct: 449 YGYKLSNSVKTGIRLSFSKNPL 470
>gi|302505920|ref|XP_003014917.1| RNA binding protein [Arthroderma benhamiae CBS 112371]
gi|291178488|gb|EFE34277.1| RNA binding protein [Arthroderma benhamiae CBS 112371]
Length = 655
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL P+ +EDELK S G+ + R + P+ F +FE+V A+ + L
Sbjct: 426 PCNTLYVGNLPPDTSEDELKALFSRQRGYKRMIFRQKPNGPICFVEFEDVSFATKCLTEL 485
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 486 YGYELSNSVKGGIRLSFSKNPL 507
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ LF R+ G+ ++ + + N + F F
Sbjct: 416 PPVNPADQNPPCNTLYVGNLPPDTSEDELKALFSRQRGYK--RMIFRQKPNGPICFVEFE 473
Query: 84 NHQTAVAALHELNGVKF 100
+ A L EL G +
Sbjct: 474 DVSFATKCLTELYGYEL 490
>gi|328875060|gb|EGG23425.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 302
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 21 VPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFA 80
VPPPP Q + +TLFVS LP DV RE+ LFR GF C+L G + F
Sbjct: 203 VPPPP---GQFKDPQSTLFVSNLPKDVTERELSILFRFMRGFISCRL-VIREGKYPICFC 258
Query: 81 TFVNHQTAVAALHELNGVKFDPQS-GSVLHIELARSNS 117
F + +A+ A+ L G + DP S + IE RS +
Sbjct: 259 DFRDIPSAIMAMEILQGYRMDPNDVSSSISIEFDRSRN 296
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-GGMPVAFADFEEVEQASIAMEG 258
P STLF++NL + TE EL GF ++ R G P+ F DF ++ A +AME
Sbjct: 213 PQSTLFVSNLPKDVTERELSILFRFMRGFISCRLVIREGKYPICFCDFRDIPSAIMAMEI 272
Query: 259 LQDSTL-PSSDRGGMHIEYARSK 280
LQ + P+ + IE+ RS+
Sbjct: 273 LQGYRMDPNDVSSSISIEFDRSR 295
>gi|302660324|ref|XP_003021842.1| RNA binding protein [Trichophyton verrucosum HKI 0517]
gi|291185760|gb|EFE41224.1| RNA binding protein [Trichophyton verrucosum HKI 0517]
Length = 654
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL P+ +EDELK S G+ + R + P+ F +FE+V A+ + L
Sbjct: 425 PCNTLYVGNLPPDTSEDELKALFSRQRGYKRMIFRQKPNGPICFVEFEDVSFATKCLTEL 484
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 485 YGYELSNSVKGGIRLSFSKNPL 506
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ LF R+ G+ ++ + + N + F F
Sbjct: 415 PPVNPADQNPPCNTLYVGNLPPDTSEDELKALFSRQRGYK--RMIFRQKPNGPICFVEFE 472
Query: 84 NHQTAVAALHELNGVKF 100
+ A L EL G +
Sbjct: 473 DVSFATKCLTELYGYEL 489
>gi|425774296|gb|EKV12605.1| RNA binding protein [Penicillium digitatum Pd1]
gi|425776297|gb|EKV14519.1| RNA binding protein [Penicillium digitatum PHI26]
Length = 518
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL P+ +E+ELK S G+ L R + P+ F +F+EV AS A+ L
Sbjct: 306 PCNTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFDEVAMASKALNEL 365
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S + G+ + ++++ +
Sbjct: 366 YGYKLSNSVKTGIRLSFSKNPL 387
>gi|388579466|gb|EIM19789.1| hypothetical protein WALSEDRAFT_61284 [Wallemia sebi CBS 633.66]
Length = 597
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 8/106 (7%)
Query: 183 NAVAPINSEKPYEGGVQPCSTLFIANLGP-------NCTEDELKQTLSVYPGFNMLKMRA 235
N++AP+ P + PCSTL++ NL + ED L+ S GF L R
Sbjct: 469 NSLAPLKPTNPADQN-PPCSTLYVGNLTTPPPSQPVSLLEDALRALFSKQGGFKRLSFRQ 527
Query: 236 RGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
+ P+ F +FE+V+ A+ + L +TL RGG+ + Y+++ +
Sbjct: 528 KANGPMCFVEFEDVQLATKTLHDLYGNTLNGLIRGGIRLSYSKNPL 573
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 60/159 (37%), Gaps = 53/159 (33%)
Query: 17 PPPPVPPP------PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKY- 69
PPPP+P +++ + I+T+FV G PDD+ RE N+F F+ LK
Sbjct: 88 PPPPLPISNVTRNNSFNNLAGSDDISTIFVVGFPDDMTEREFQNMFIFSSEFEAATLKIP 147
Query: 70 --------------------TG----RGN----------------------QVVAFATFV 83
TG R N Q + FA F
Sbjct: 148 AKEVLPPPHKDPYTLANIPATGIMSERENSSTIDESVNLNITAAQQLSARKQTIGFAKFR 207
Query: 84 NHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRK 122
Q A+ A L+G K D + GSVL E+A+ N + K
Sbjct: 208 TKQAALDAKDVLSGRKIDGERGSVLKAEMAKKNLHTRSK 246
>gi|365988166|ref|XP_003670914.1| hypothetical protein NDAI_0F03530 [Naumovozyma dairenensis CBS 421]
gi|343769685|emb|CCD25671.1| hypothetical protein NDAI_0F03530 [Naumovozyma dairenensis CBS 421]
Length = 640
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 18/100 (18%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM---------------PVAFA 244
PC+TL++ NL +CTE EL+Q S GF L R + P+ F
Sbjct: 483 PCNTLYVGNLPVDCTEQELRQLFSTQEGFKRLSFRVKNNNSNNVMLSNSNSAAHGPMCFV 542
Query: 245 DFEEVEQASIAMEGLQDSTLPS---SDRGGMHIEYARSKM 281
+FE++ A+ A+ L + LP S++GG+ + ++++ +
Sbjct: 543 EFEDIAYATKALAELYGTQLPRATPSNKGGIRLSFSKNPL 582
>gi|121713206|ref|XP_001274214.1| RNA binding protein [Aspergillus clavatus NRRL 1]
gi|119402367|gb|EAW12788.1| RNA binding protein [Aspergillus clavatus NRRL 1]
Length = 616
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL P+ +E+ELK S G+ L R + P+ F +F+EV AS A+ L
Sbjct: 405 PCNTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFDEVAMASKALNEL 464
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S + G+ + ++++ +
Sbjct: 465 YGYKLSNSVKTGIRLSFSKNPL 486
>gi|330840143|ref|XP_003292080.1| hypothetical protein DICPUDRAFT_89664 [Dictyostelium purpureum]
gi|325077715|gb|EGC31410.1| hypothetical protein DICPUDRAFT_89664 [Dictyostelium purpureum]
Length = 328
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 55/111 (49%), Gaps = 11/111 (9%)
Query: 19 PPVPPPPY----HHQQQDNGIN-----TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKY 69
P +P P + HH IN TLFVS LP DV RE+ LFR GF +L
Sbjct: 219 PHLPSPHHTHFSHHTNSGGHINSPPCPTLFVSNLPKDVTEREVSILFRFMAGFVGIRL-I 277
Query: 70 TGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQS-GSVLHIELARSNSRK 119
G + F FV+ Q+A AL L G + DP+ S + IE R+N+++
Sbjct: 278 NKEGKLPMCFCDFVDSQSAAMALDFLQGFRMDPKDISSSISIEFDRANNKR 328
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
PC TLF++NL + TE E+ GF +++ G +P+ F DF + + A++A++
Sbjct: 243 PCPTLFVSNLPKDVTEREVSILFRFMAGFVGIRLINKEGKLPMCFCDFVDSQSAAMALDF 302
Query: 259 LQDSTL-PSSDRGGMHIEYARSKMRK 283
LQ + P + IE+ R+ ++
Sbjct: 303 LQGFRMDPKDISSSISIEFDRANNKR 328
>gi|406859405|gb|EKD12471.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 842
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK S G+ L R + P+ F +FE+V A+ A+ L
Sbjct: 382 PCNTLYVGNLPIDTSEDELKAMFSKQRGYKRLCFRTKQNGPMCFVEFEDVSFATKALHEL 441
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 442 YGHPLHNSVKGGIRLSFSKNPL 463
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ +F ++ G+ +L + + N + F F
Sbjct: 372 PPVNPADQNPPCNTLYVGNLPIDTSEDELKAMFSKQRGYK--RLCFRTKQNGPMCFVEFE 429
Query: 84 NHQTAVAALHELNG 97
+ A ALHEL G
Sbjct: 430 DVSFATKALHELYG 443
>gi|384501069|gb|EIE91560.1| hypothetical protein RO3G_16271 [Rhizopus delemar RA 99-880]
Length = 314
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+T+++ NL +EDEL+ S G+ + R +G P+ F +FE++ AS A++ L
Sbjct: 217 PCNTIYVGNLPSTTSEDELRALFSNCKGYRRMCFRTKG--PMCFVEFEDILCASQAIKDL 274
Query: 260 QDSTLPSSDRGGMHIEYARS 279
Q TL +S + G+ + ++++
Sbjct: 275 QGYTLSNSAKSGVRLSFSKN 294
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 50 REIHNLFRRKPGFDFCQLKYTGR---------GNQVVAFATFVNHQTAVAALHELNGVKF 100
RE N+F PGF+ LK+ + Q++ FA F A+ ++ LNG K
Sbjct: 4 REFQNIFTFCPGFEAASLKWHCKDQQHNDIQGKKQMIGFARFKTRLEALESIEILNGKKI 63
Query: 101 DPQSGSVLHIELARSNSRKKR 121
D + G VL E+A+ N KR
Sbjct: 64 DQEKGIVLKAEMAKKNLHIKR 84
>gi|361127106|gb|EHK99086.1| putative Cell wall integrity protein scw1 [Glarea lozoyensis 74030]
Length = 446
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK S G+ L R + P+ F +FE+V A+ A+ L
Sbjct: 249 PCNTLYVGNLPIDTSEDELKAMFSKQRGYKRLCFRTKQNGPMCFVEFEDVSFATKALHEL 308
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 309 YGHPLHNSIKGGIRLSFSKNPL 330
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ +F ++ G+ +L + + N + F F
Sbjct: 239 PPVNPADQNPPCNTLYVGNLPIDTSEDELKAMFSKQRGYK--RLCFRTKQNGPMCFVEFE 296
Query: 84 NHQTAVAALHELNG 97
+ A ALHEL G
Sbjct: 297 DVSFATKALHELYG 310
>gi|440634774|gb|ELR04693.1| hypothetical protein GMDG_01551 [Geomyces destructans 20631-21]
Length = 577
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK S G+ L R + P+ F +FE+V A+ A+ L
Sbjct: 378 PCNTLYVGNLPIDTSEDELKAMFSKQRGYKRLCFRTKQNGPMCFVEFEDVSFATKALHEL 437
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 438 YGHPLHNSVKGGIRLSFSKNPL 459
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ +F ++ G+ +L + + N + F F
Sbjct: 368 PPVNPADQNPPCNTLYVGNLPIDTSEDELKAMFSKQRGYK--RLCFRTKQNGPMCFVEFE 425
Query: 84 NHQTAVAALHELNG 97
+ A ALHEL G
Sbjct: 426 DVSFATKALHELYG 439
>gi|407922123|gb|EKG15250.1| hypothetical protein MPH_07584 [Macrophomina phaseolina MS6]
Length = 589
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK S G+ L R + P+ F +FE+V A+ A+ L
Sbjct: 398 PCNTLYVGNLPIDTSEDELKAMFSKQRGYKRLCFRTKANGPMCFVEFEDVSFATKALNEL 457
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 458 YGHPLHNSVKGGIRLSFSKNPL 479
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ +F ++ G+ +L + + N + F F
Sbjct: 388 PPVNPADQNPPCNTLYVGNLPIDTSEDELKAMFSKQRGYK--RLCFRTKANGPMCFVEFE 445
Query: 84 NHQTAVAALHELNG 97
+ A AL+EL G
Sbjct: 446 DVSFATKALNELYG 459
>gi|402075260|gb|EJT70731.1| RNA binding protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 620
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +E+ELK T S G+ L R + P+ F +FE+V A+ A+ L
Sbjct: 429 PCNTLYVGNLPIDTSEEELKATFSKQRGYKRLCFRTKQNGPMCFVEFEDVSFATKALHDL 488
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 489 YGHMLHNSVKGGIRLSFSKNPL 510
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ F ++ G+ +L + + N + F F
Sbjct: 419 PPVNPADQNPPCNTLYVGNLPIDTSEEELKATFSKQRGYK--RLCFRTKQNGPMCFVEFE 476
Query: 84 NHQTAVAALHELNG 97
+ A ALH+L G
Sbjct: 477 DVSFATKALHDLYG 490
>gi|389645993|ref|XP_003720628.1| RNA binding protein [Magnaporthe oryzae 70-15]
gi|86196803|gb|EAQ71441.1| hypothetical protein MGCH7_ch7g848 [Magnaporthe oryzae 70-15]
gi|351638020|gb|EHA45885.1| RNA binding protein [Magnaporthe oryzae 70-15]
gi|440479486|gb|ELQ60251.1| RNA binding protein [Magnaporthe oryzae P131]
Length = 622
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +E+ELK T S G+ L R + P+ F +FE+V A+ A+ L
Sbjct: 416 PCNTLYVGNLPIDTSEEELKATFSKQRGYKRLCFRTKQNGPMCFVEFEDVSFATKALHEL 475
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 476 YGHMLHNSVKGGIRLSFSKNPL 497
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ F ++ G+ +L + + N + F F
Sbjct: 406 PPVNPADQNPPCNTLYVGNLPIDTSEEELKATFSKQRGYK--RLCFRTKQNGPMCFVEFE 463
Query: 84 NHQTAVAALHELNG 97
+ A ALHEL G
Sbjct: 464 DVSFATKALHELYG 477
>gi|444315532|ref|XP_004178423.1| hypothetical protein TBLA_0B00600 [Tetrapisispora blattae CBS 6284]
gi|387511463|emb|CCH58904.1| hypothetical protein TBLA_0B00600 [Tetrapisispora blattae CBS 6284]
Length = 734
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMR-----ARGGMPVAFADFEEVEQASI 254
PC+TL++ NL P+ TE EL+Q S GF L R G P+ F +FE+V A+
Sbjct: 606 PCNTLYVGNLPPDATEQELRQLFSTQDGFRRLSFRNKNNNGNGHGPMCFVEFEDVSYATR 665
Query: 255 AMEGLQDSTL---PSSDRGGMHIEYARSKM 281
A+ L S L ++++GG+ + ++++ +
Sbjct: 666 ALAELYGSQLQRTTATNKGGIRLSFSKNPL 695
>gi|440472158|gb|ELQ41041.1| RNA binding protein [Magnaporthe oryzae Y34]
Length = 622
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +E+ELK T S G+ L R + P+ F +FE+V A+ A+ L
Sbjct: 416 PCNTLYVGNLPIDTSEEELKATFSKQRGYKRLCFRTKQNGPMCFVEFEDVSFATKALHEL 475
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 476 YGHMLHNSVKGGIRLSFSKNPL 497
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ F ++ G+ +L + + N + F F
Sbjct: 406 PPVNPADQNPPCNTLYVGNLPIDTSEEELKATFSKQRGYK--RLCFRTKQNGPMCFVEFE 463
Query: 84 NHQTAVAALHELNG 97
+ A ALHEL G
Sbjct: 464 DVSFATKALHELYG 477
>gi|378730449|gb|EHY56908.1| hypothetical protein HMPREF1120_04972 [Exophiala dermatitidis
NIH/UT8656]
Length = 501
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK S G+ L R + P+ F +FE++ A+ A+ L
Sbjct: 310 PCNTLYVGNLPMDTSEDELKAIFSKQRGYKRLCFRTKHNGPMCFVEFEDISFATKALNEL 369
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
+ L +S +GG+ + ++++ +
Sbjct: 370 YGAQLHNSVKGGIRLSFSKNPL 391
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ +F ++ G+ +L + + N + F F
Sbjct: 300 PPANPADQNPPCNTLYVGNLPMDTSEDELKAIFSKQRGYK--RLCFRTKHNGPMCFVEFE 357
Query: 84 NHQTAVAALHELNGVKF 100
+ A AL+EL G +
Sbjct: 358 DISFATKALNELYGAQL 374
>gi|366995285|ref|XP_003677406.1| hypothetical protein NCAS_0G01660 [Naumovozyma castellii CBS 4309]
gi|342303275|emb|CCC71053.1| hypothetical protein NCAS_0G01660 [Naumovozyma castellii CBS 4309]
Length = 585
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 24/106 (22%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM-------------------- 239
PC+TL++ NL +CTE EL+ S PGF L R +
Sbjct: 438 PCNTLYVGNLPADCTEQELRLLFSNQPGFKRLSFRIKNSKLNPSSSNTNASIMPSSSAAH 497
Query: 240 -PVAFADFEEVEQASIAMEGLQDSTLP---SSDRGGMHIEYARSKM 281
P+ F +FE++ A++A+ L + LP +S +GG+ + ++++ +
Sbjct: 498 GPMCFVEFEDISYATMALAELYGAQLPRATTSTKGGIRLSFSKNPL 543
>gi|452984744|gb|EME84501.1| hypothetical protein MYCFIDRAFT_182368 [Pseudocercospora fijiensis
CIRAD86]
Length = 479
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK S G+ L R + P+ F +FE++ A+ A+ L
Sbjct: 284 PCNTLYVGNLPIDTSEDELKSLFSKQRGYKRLCFRTKQNGPMCFVEFEDISFATKALHEL 343
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 344 YGHPLHNSVKGGIRLSFSKNPL 365
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ +LF ++ G+ +L + + N + F F
Sbjct: 274 PPVNPADQNPPCNTLYVGNLPIDTSEDELKSLFSKQRGYK--RLCFRTKQNGPMCFVEFE 331
Query: 84 NHQTAVAALHELNG 97
+ A ALHEL G
Sbjct: 332 DISFATKALHELYG 345
>gi|384497012|gb|EIE87503.1| hypothetical protein RO3G_12214 [Rhizopus delemar RA 99-880]
Length = 402
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGN-------------QVVAFAT 81
I+T+FV G P+D++ RE N+F GF+ LK + Q++ FA
Sbjct: 37 ISTIFVVGFPEDMQEREFQNMFTFSSGFEAATLKVPSSKDGEEDISAINNIKKQIIGFAK 96
Query: 82 FVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
F + A A LNG K D + G+ L E+A+ N K+
Sbjct: 97 FRTRKEATEAKDILNGRKVDIEKGNTLKAEMAKKNLHTKK 136
>gi|313231398|emb|CBY08513.1| unnamed protein product [Oikopleura dioica]
Length = 239
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV--------VAFATFVNHQ 86
+ TLFVSGLP DV+ RE + LF+ GF+ +K R ++ VAF TF + +
Sbjct: 43 LRTLFVSGLPQDVKEREFYLLFQGFSGFECAIVKQPVRNVKLPNNQPLGPVAFLTFASRK 102
Query: 87 TAVAALHELNGVKFDPQSGS-VLHIELARSNSR 118
A A + +G DPQ + V+ IE A++N++
Sbjct: 103 DAETAKDKFHGFALDPQVDNLVMKIEFAKANTK 135
>gi|171683983|ref|XP_001906933.1| hypothetical protein [Podospora anserina S mat+]
gi|170941952|emb|CAP67604.1| unnamed protein product [Podospora anserina S mat+]
Length = 570
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +E+ELKQ S G+ L R + P+ F +FE + A+ A+ L
Sbjct: 371 PCNTLYVGNLPVDTSEEELKQLFSKQRGYKRLCFRTKQNGPMCFVEFENITFATKALNEL 430
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 431 YGFQLHNSVKGGIRLSFSKNPL 452
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ LF ++ G+ +L + + N + F F
Sbjct: 361 PPANPADQNPPCNTLYVGNLPVDTSEEELKQLFSKQRGYK--RLCFRTKQNGPMCFVEFE 418
Query: 84 NHQTAVAALHELNGVKF 100
N A AL+EL G +
Sbjct: 419 NITFATKALNELYGFQL 435
>gi|358385005|gb|EHK22602.1| hypothetical protein TRIVIDRAFT_22864, partial [Trichoderma virens
Gv29-8]
Length = 437
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +E+ELK S G+ L R + P+ F +FE++ A+ A+ L
Sbjct: 295 PCNTLYVGNLPIDTSEEELKALFSPVRGYKRLCFRTKQNGPMCFVEFEDIGHATKALSQL 354
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 355 YGWCLHNSVKGGIRLSFSKNPL 376
>gi|340975878|gb|EGS22993.1| putative RNA binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 586
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +E+ELK S G+ L R + P+ F +FE+V A+ A+ L
Sbjct: 407 PCNTLYVGNLPHDTSEEELKAMFSKQRGYKRLCFRTKANGPMCFVEFEDVTFATKALHEL 466
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 467 YGQPLHNSVKGGIRLSFSKNPL 488
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 15/95 (15%)
Query: 3 HPPYDPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGF 62
PPY +Y PPI+P Q+ NTL+V LP D E+ +F ++ G+
Sbjct: 389 QPPYRRHY-PPINP------------ADQNPPCNTLYVGNLPHDTSEEELKAMFSKQRGY 435
Query: 63 DFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
+L + + N + F F + A ALHEL G
Sbjct: 436 K--RLCFRTKANGPMCFVEFEDVTFATKALHELYG 468
>gi|400600735|gb|EJP68403.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 933
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +E+ELK G+ L R + P+ F +FE++ A+ A+ L
Sbjct: 741 PCNTLYVGNLPIDTSEEELKAVFCKQRGYKRLCFRTKQNGPMCFVEFEDITFATKALHDL 800
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
+ L +S +GG+ + ++++ +
Sbjct: 801 YGTPLHNSTKGGIRLSFSKNPL 822
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ +F ++ G+ +L + + N + F F
Sbjct: 731 PPVNPADQNPPCNTLYVGNLPIDTSEEELKAVFCKQRGYK--RLCFRTKQNGPMCFVEFE 788
Query: 84 NHQTAVAALHELNGV 98
+ A ALH+L G
Sbjct: 789 DITFATKALHDLYGT 803
>gi|151941784|gb|EDN60140.1| whiskey [Saccharomyces cerevisiae YJM789]
Length = 649
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGG----------MPVAFADFEEV 249
PC+TL++ NL P+ TE EL+Q S GF L R + P+ F +FE+V
Sbjct: 531 PCNTLYVGNLPPDATEQELRQLFSNQQGFRRLSFRNKMNSHGHGNGHGHGPICFVEFEDV 590
Query: 250 EQASIAMEGLQDSTLPS-----SDRGGMHIEYARSKM 281
A+ A+ L S LP +++GG+ + ++++ +
Sbjct: 591 SFATRALAELYGSQLPHPRPSLNNKGGIRLSFSKNPL 627
Score = 37.0 bits (84), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 12/88 (13%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV------ 76
PPP + Q+ NTL+V LP D +E+ LF + GF +L + + N
Sbjct: 520 PPPANPADQNPPCNTLYVGNLPPDATEQELRQLFSNQQGFR--RLSFRNKMNSHGHGNGH 577
Query: 77 ----VAFATFVNHQTAVAALHELNGVKF 100
+ F F + A AL EL G +
Sbjct: 578 GHGPICFVEFEDVSFATRALAELYGSQL 605
>gi|387915158|gb|AFK11188.1| RNA binding protein with multiple splicing 2 [Callorhinchus milii]
Length = 180
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 46 DVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSG 105
D++ RE++ LFR G++ +K T + Q V F TF + A AA + LNG++FDP++
Sbjct: 2 DIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRTGAEAAKNALNGIRFDPENP 59
Query: 106 SVLHIELARSNSRKKR 121
L +E A++N++ +
Sbjct: 60 QTLRLEFAKANTKMAK 75
>gi|349576861|dbj|GAA22030.1| K7_Whi4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 649
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGG----------MPVAFADFEEV 249
PC+TL++ NL P+ TE EL+Q S GF L R + P+ F +FE+V
Sbjct: 531 PCNTLYVGNLPPDATEQELRQLFSNQQGFRRLSFRNKMNSHGHGNGHGHGPICFVEFEDV 590
Query: 250 EQASIAMEGLQDSTLPS-----SDRGGMHIEYARSKM 281
A+ A+ L S LP +++GG+ + ++++ +
Sbjct: 591 SFATRALAELYGSQLPHPRPSLNNKGGIRLSFSKNPL 627
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 12/88 (13%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV------ 76
PPP + Q+ NTL+V LP D +E+ LF + GF +L + + N
Sbjct: 520 PPPANPADQNPPCNTLYVGNLPPDATEQELRQLFSNQQGFR--RLSFRNKMNSHGHGNGH 577
Query: 77 ----VAFATFVNHQTAVAALHELNGVKF 100
+ F F + A AL EL G +
Sbjct: 578 GHGPICFVEFEDVSFATRALAELYGSQL 605
>gi|6319977|ref|NP_010057.1| Whi4p [Saccharomyces cerevisiae S288c]
gi|74676444|sp|Q07655.1|WHI4_YEAST RecName: Full=Protein WHI4
gi|1431377|emb|CAA98803.1| WHI4 [Saccharomyces cerevisiae]
gi|207347167|gb|EDZ73442.1| YDL224Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270998|gb|EEU06112.1| Whi4p [Saccharomyces cerevisiae JAY291]
gi|259145798|emb|CAY79061.1| Whi4p [Saccharomyces cerevisiae EC1118]
gi|285810817|tpg|DAA11641.1| TPA: Whi4p [Saccharomyces cerevisiae S288c]
gi|323305765|gb|EGA59504.1| Whi4p [Saccharomyces cerevisiae FostersB]
gi|323349375|gb|EGA83599.1| Whi4p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355917|gb|EGA87728.1| Whi4p [Saccharomyces cerevisiae VL3]
gi|365761695|gb|EHN03332.1| Whi4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392300090|gb|EIW11181.1| Whi4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 649
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGG----------MPVAFADFEEV 249
PC+TL++ NL P+ TE EL+Q S GF L R + P+ F +FE+V
Sbjct: 531 PCNTLYVGNLPPDATEQELRQLFSNQQGFRRLSFRNKMNSHGHGNGHGHGPICFVEFEDV 590
Query: 250 EQASIAMEGLQDSTLPS-----SDRGGMHIEYARSKM 281
A+ A+ L S LP +++GG+ + ++++ +
Sbjct: 591 SFATRALAELYGSQLPHPRPSLNNKGGIRLSFSKNPL 627
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 12/88 (13%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV------ 76
PPP + Q+ NTL+V LP D +E+ LF + GF +L + + N
Sbjct: 520 PPPANPADQNPPCNTLYVGNLPPDATEQELRQLFSNQQGFR--RLSFRNKMNSHGHGNGH 577
Query: 77 ----VAFATFVNHQTAVAALHELNGVKF 100
+ F F + A AL EL G +
Sbjct: 578 GHGPICFVEFEDVSFATRALAELYGSQL 605
>gi|323338486|gb|EGA79710.1| Whi4p [Saccharomyces cerevisiae Vin13]
Length = 649
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGG----------MPVAFADFEEV 249
PC+TL++ NL P+ TE EL+Q S GF L R + P+ F +FE+V
Sbjct: 531 PCNTLYVGNLPPDATEQELRQLFSNQQGFRRLSFRNKMNSHGHGNGHGHGPICFVEFEDV 590
Query: 250 EQASIAMEGLQDSTLPS-----SDRGGMHIEYARSKM 281
A+ A+ L S LP +++GG+ + ++++ +
Sbjct: 591 SFATRALAELYGSQLPHPRPSLNNKGGIRLSFSKNPL 627
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 12/88 (13%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV------ 76
PPP + Q+ NTL+V LP D +E+ LF + GF +L + + N
Sbjct: 520 PPPANPADQNPPCNTLYVGNLPPDATEQELRQLFSNQQGFR--RLSFRNKMNSHGHGNGH 577
Query: 77 ----VAFATFVNHQTAVAALHELNGVKF 100
+ F F + A AL EL G +
Sbjct: 578 GHGPICFVEFEDVSFATRALAELYGSQL 605
>gi|410080362|ref|XP_003957761.1| hypothetical protein KAFR_0F00290 [Kazachstania africana CBS 2517]
gi|372464348|emb|CCF58626.1| hypothetical protein KAFR_0F00290 [Kazachstania africana CBS 2517]
Length = 680
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-------GGMPVAFADFEEVEQA 252
PC+TL++ NL P+ TE EL+Q S GF L + + G P+ F +F++V +
Sbjct: 554 PCNTLYVGNLPPDATEQELRQLFSSQEGFRRLSFKNKSIPGHGHGHGPMCFVEFDDVSFS 613
Query: 253 SIAMEGLQDSTLPSS---DRGGMHIEYARSKM 281
+ A+ L S LP S +GG+ + ++++ +
Sbjct: 614 TRALAKLYGSQLPRSTINSKGGIRLSFSKNPL 645
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT-----GRGNQVV 77
PPP + Q+ NTL+V LP D +E+ LF + GF K G G+ +
Sbjct: 543 PPPANPADQNPPCNTLYVGNLPPDATEQELRQLFSSQEGFRRLSFKNKSIPGHGHGHGPM 602
Query: 78 AFATFVNHQTAVAALHELNGVKF 100
F F + + AL +L G +
Sbjct: 603 CFVEFDDVSFSTRALAKLYGSQL 625
>gi|396474256|ref|XP_003839528.1| similar to RNA binding protein [Leptosphaeria maculans JN3]
gi|312216097|emb|CBX96049.1| similar to RNA binding protein [Leptosphaeria maculans JN3]
Length = 572
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK S G+ L R + P+ F +FE+ A+ A+ L
Sbjct: 382 PCNTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGPMCFVEFEDTSFATKALNDL 441
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 442 YGYMLHNSVKGGIRLSFSKNPL 463
>gi|169613152|ref|XP_001799993.1| hypothetical protein SNOG_09707 [Phaeosphaeria nodorum SN15]
gi|111061852|gb|EAT82972.1| hypothetical protein SNOG_09707 [Phaeosphaeria nodorum SN15]
Length = 572
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK S G+ L R + P+ F +FE+ A+ A+ L
Sbjct: 387 PCNTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGPMCFVEFEDTSFATKALNEL 446
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 447 YGYMLHNSVKGGIRLSFSKNPL 468
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ +F ++ G+ +L + + N + F F
Sbjct: 377 PPVNPADQNPPCNTLYVGNLPMDTSEDELKAVFSKQRGYK--RLCFRTKQNGPMCFVEFE 434
Query: 84 NHQTAVAALHELNG 97
+ A AL+EL G
Sbjct: 435 DTSFATKALNELYG 448
>gi|401626491|gb|EJS44435.1| whi4p [Saccharomyces arboricola H-6]
Length = 649
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGG----------MPVAFADFEEV 249
PC+TL++ NL P+ TE EL+Q S GF L R + P+ F +FE+V
Sbjct: 531 PCNTLYVGNLPPDATEQELRQLFSNQQGFRRLSFRNKMNSHGHGSGHGHGPICFVEFEDV 590
Query: 250 EQASIAMEGLQDSTLPS-----SDRGGMHIEYARSKM 281
A+ A+ L S LP +++GG+ + ++++ +
Sbjct: 591 SFATRALAELYGSQLPHPRPSLNNKGGIRLSFSKNPL 627
>gi|322701438|gb|EFY93188.1| hypothetical protein MAC_00971 [Metarhizium acridum CQMa 102]
Length = 567
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +E+ELK S G+ L R + P+ F +FE+V A+ A+ L
Sbjct: 375 PCNTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNGPMCFVEFEDVSFATKALHEL 434
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 435 YGQPLHNSVKGGIRLSFSKNPL 456
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ +F ++ G+ +L + + N + F F
Sbjct: 365 PPVNPADQNPPCNTLYVGNLPIDTSEEELKAMFSKQRGYK--RLCFRTKQNGPMCFVEFE 422
Query: 84 NHQTAVAALHELNGVKFDPQSGSVLHIELARS--NSRKKRKPGSGAYVVIDKRTKTEAN 140
+ A ALHEL G + + +++ R + PG GA + T +N
Sbjct: 423 DVSFATKALHELYGQPLHNSVKGGIRLSFSKNPLGVRSGQAPGQGANTSMSNMTGMMSN 481
>gi|322709618|gb|EFZ01194.1| RNA binding protein [Metarhizium anisopliae ARSEF 23]
Length = 564
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +E+ELK S G+ L R + P+ F +FE+V A+ A+ L
Sbjct: 373 PCNTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNGPMCFVEFEDVSFATKALHEL 432
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 433 YGQPLHNSVKGGIRLSFSKNPL 454
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ +F ++ G+ +L + + N + F F
Sbjct: 363 PPVNPADQNPPCNTLYVGNLPIDTSEEELKAMFSKQRGYK--RLCFRTKQNGPMCFVEFE 420
Query: 84 NHQTAVAALHELNGVKFDPQSGSVLHIELARS--NSRKKRKPGSGAYVVIDKRTKTEAN 140
+ A ALHEL G + + +++ R + PG GA + T N
Sbjct: 421 DVSFATKALHELYGQPLHNSVKGGIRLSFSKNPLGVRSGQAPGQGANTSMGNMTGMMGN 479
>gi|50288343|ref|XP_446600.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525908|emb|CAG59527.1| unnamed protein product [Candida glabrata]
Length = 674
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-------GGMPVAFADFEEVEQA 252
PC+TL++ NL P+ +E EL+Q S PGF L + + G P+ F +FE+V A
Sbjct: 556 PCNTLYVGNLPPDTSEQELRQLFSPQPGFRRLSFKNKNNNGHTHGHGPMCFVEFEDVSFA 615
Query: 253 SIAMEGLQDSTLP---SSDRGGMHIEYARS 279
+ A+ L LP ++ +GG+ + ++++
Sbjct: 616 TRALAELYGRQLPRTGANSKGGIRLSFSKN 645
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTG-----RGNQVV 77
PPP + Q+ NTL+V LP D +E+ LF +PGF K G+ +
Sbjct: 545 PPPANPADQNPPCNTLYVGNLPPDTSEQELRQLFSPQPGFRRLSFKNKNNNGHTHGHGPM 604
Query: 78 AFATFVNHQTAVAALHELNGVKFDPQSGS 106
F F + A AL EL G + P++G+
Sbjct: 605 CFVEFEDVSFATRALAELYGRQL-PRTGA 632
>gi|330917653|ref|XP_003297901.1| hypothetical protein PTT_08457 [Pyrenophora teres f. teres 0-1]
gi|311329202|gb|EFQ94032.1| hypothetical protein PTT_08457 [Pyrenophora teres f. teres 0-1]
Length = 559
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK S G+ L R + P+ F +FE+ A+ A+ L
Sbjct: 373 PCNTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGPMCFVEFEDTSFATKALNEL 432
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 433 YGYMLHNSVKGGIRLSFSKNPL 454
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ +F ++ G+ +L + + N + F F
Sbjct: 363 PPVNPADQNPPCNTLYVGNLPMDTSEDELKAVFSKQRGYK--RLCFRTKQNGPMCFVEFE 420
Query: 84 NHQTAVAALHELNG 97
+ A AL+EL G
Sbjct: 421 DTSFATKALNELYG 434
>gi|367043256|ref|XP_003652008.1| hypothetical protein THITE_2112877 [Thielavia terrestris NRRL 8126]
gi|346999270|gb|AEO65672.1| hypothetical protein THITE_2112877 [Thielavia terrestris NRRL 8126]
Length = 513
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +E+ELK S G+ L R + P+ F +FE++ A+ A++ L
Sbjct: 330 PCNTLYVGNLPLDTSEEELKAMFSKQRGYKRLCFRTKANGPMCFVEFEDISFATKALKEL 389
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 390 YGQPLHNSVKGGIRLSFSKNPL 411
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ +F ++ G+ +L + + N + F F
Sbjct: 320 PPANPADQNPPCNTLYVGNLPLDTSEEELKAMFSKQRGYK--RLCFRTKANGPMCFVEFE 377
Query: 84 NHQTAVAALHELNG 97
+ A AL EL G
Sbjct: 378 DISFATKALKELYG 391
>gi|189188620|ref|XP_001930649.1| RNA binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972255|gb|EDU39754.1| RNA binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 561
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK S G+ L R + P+ F +FE+ A+ A+ L
Sbjct: 375 PCNTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGPMCFVEFEDTSFATKALNEL 434
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 435 YGYMLHNSVKGGIRLSFSKNPL 456
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ +F ++ G+ +L + + N + F F
Sbjct: 365 PPVNPADQNPPCNTLYVGNLPMDTSEDELKAVFSKQRGYK--RLCFRTKQNGPMCFVEFE 422
Query: 84 NHQTAVAALHELNG 97
+ A AL+EL G
Sbjct: 423 DTSFATKALNELYG 436
>gi|452000412|gb|EMD92873.1| hypothetical protein COCHEDRAFT_1223605 [Cochliobolus
heterostrophus C5]
Length = 561
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK S G+ L R + P+ F +FE+ A+ A+ L
Sbjct: 375 PCNTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGPMCFVEFEDTSFATKALNEL 434
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 435 YGYMLHNSVKGGIRLSFSKNPL 456
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ +F ++ G+ +L + + N + F F
Sbjct: 365 PPVNPADQNPPCNTLYVGNLPMDTSEDELKAVFSKQRGYK--RLCFRTKQNGPMCFVEFE 422
Query: 84 NHQTAVAALHELNG 97
+ A AL+EL G
Sbjct: 423 DTSFATKALNELYG 436
>gi|451850380|gb|EMD63682.1| hypothetical protein COCSADRAFT_27011 [Cochliobolus sativus ND90Pr]
Length = 936
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK S G+ L R + P+ F +FE+ A+ A+ L
Sbjct: 750 PCNTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGPMCFVEFEDTSFATKALNEL 809
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 810 YGYMLHNSVKGGIRLSFSKNPL 831
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ +F ++ G+ +L + + N + F F
Sbjct: 740 PPVNPADQNPPCNTLYVGNLPMDTSEDELKAVFSKQRGYK--RLCFRTKQNGPMCFVEFE 797
Query: 84 NHQTAVAALHELNG 97
+ A AL+EL G
Sbjct: 798 DTSFATKALNELYG 811
>gi|429852927|gb|ELA28038.1| RNA binding protein [Colletotrichum gloeosporioides Nara gc5]
Length = 518
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +E+ELK S G+ L R + P+ F +FE+V A+ A+ L
Sbjct: 336 PCNTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNGPMCFVEFEDVSFATKALHDL 395
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 396 YGQPLHNSVKGGIRLSFSKNPL 417
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 14/93 (15%)
Query: 5 PYDPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDF 64
PY + PP++P Q+ NTL+V LP D E+ +F ++ G+
Sbjct: 319 PYARHNFPPVNP------------ADQNPPCNTLYVGNLPIDTSEEELKAMFSKQRGYK- 365
Query: 65 CQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
+L + + N + F F + A ALH+L G
Sbjct: 366 -RLCFRTKQNGPMCFVEFEDVSFATKALHDLYG 397
>gi|239611843|gb|EEQ88830.1| RNA binding protein [Ajellomyces dermatitidis ER-3]
Length = 531
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK + G+ L R + P+ F +FE++ A+ A+ L
Sbjct: 380 PCNTLYVGNLPHDTSEDELKALFTKQRGYKRLCFRNKQNGPMCFVEFEDISFATKALHEL 439
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 440 YGYQLSNSVKGGIRLSFSKNPL 461
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ LF ++ G+ +L + + N + F F
Sbjct: 370 PPVNPADQNPPCNTLYVGNLPHDTSEDELKALFTKQRGYK--RLCFRNKQNGPMCFVEFE 427
Query: 84 NHQTAVAALHELNGVKFD 101
+ A ALHEL G +
Sbjct: 428 DISFATKALHELYGYQLS 445
>gi|344229622|gb|EGV61507.1| hypothetical protein CANTEDRAFT_94398 [Candida tenuis ATCC 10573]
Length = 526
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 13/95 (13%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM---------PVAFADFEEVE 250
PC+TL++ NL P+ TE EL+ S GF L R + P+ F +FE+V
Sbjct: 405 PCNTLYVGNLPPDATEQELRALFSPQKGFRRLSFRTKANASGSGSNNHGPMCFVEFEDVA 464
Query: 251 QASIAMEGLQDSTLP----SSDRGGMHIEYARSKM 281
A+ A+ L LP S+ +GG+ + ++++ +
Sbjct: 465 HATRALAELYGRILPRPSSSNGKGGIRLSFSKNPL 499
>gi|240277155|gb|EER40664.1| RNA binding protein [Ajellomyces capsulatus H143]
gi|325093977|gb|EGC47287.1| RNA binding protein [Ajellomyces capsulatus H88]
Length = 509
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK + G+ L R + P+ F +FE++ A+ A+ L
Sbjct: 309 PCNTLYVGNLPHDTSEDELKALFTKQRGYKRLCFRNKQNGPMCFVEFEDISFATKALHEL 368
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 369 YGYQLSNSVKGGIRLSFSKNPL 390
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ LF ++ G+ +L + + N + F F
Sbjct: 299 PPVNPADQNPPCNTLYVGNLPHDTSEDELKALFTKQRGYK--RLCFRNKQNGPMCFVEFE 356
Query: 84 NHQTAVAALHELNGVKFD 101
+ A ALHEL G +
Sbjct: 357 DISFATKALHELYGYQLS 374
>gi|260943586|ref|XP_002616091.1| hypothetical protein CLUG_03332 [Clavispora lusitaniae ATCC 42720]
gi|238849740|gb|EEQ39204.1| hypothetical protein CLUG_03332 [Clavispora lusitaniae ATCC 42720]
Length = 589
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 17/99 (17%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM-------------PVAFADF 246
PC+TL++ NL P+ TE EL+ S GF L R + P+ F +F
Sbjct: 456 PCNTLYVGNLPPDATEAELRALFSPQKGFRRLSFRTKNQSSSSGSGSSGHNHGPMCFVEF 515
Query: 247 EEVEQASIAMEGLQDSTLP----SSDRGGMHIEYARSKM 281
E+V A+IA+ L LP S+ +GG+ + ++++ +
Sbjct: 516 EDVAHATIALAELYGRALPRPNGSNGKGGIRLSFSKNPL 554
>gi|358393470|gb|EHK42871.1| hypothetical protein TRIATDRAFT_164924, partial [Trichoderma
atroviride IMI 206040]
Length = 446
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 47/82 (57%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + E+ELK G+ L R + P+ F +FE++ A+ A+ +
Sbjct: 298 PCNTLYVGNLPVDTAEEELKAMFCKQRGYKRLCFRTKANGPMCFVEFEDISLATRALNEM 357
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
+ L +S +GG+ + ++++ +
Sbjct: 358 YGALLHNSTKGGIRLSFSKNPL 379
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ +F ++ G+ +L + + N + F F
Sbjct: 288 PPVNPADQNPPCNTLYVGNLPVDTAEEELKAMFCKQRGYK--RLCFRTKANGPMCFVEFE 345
Query: 84 NHQTAVAALHELNGV 98
+ A AL+E+ G
Sbjct: 346 DISLATRALNEMYGA 360
>gi|347839962|emb|CCD54534.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1036
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 158 PVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDE 217
P R + D+ + Q R PIN+ + Y PC+TL + NL N +E E
Sbjct: 672 PARALRDGDRQEVHEYQRHR-------FQPINTAEQYP----PCNTLLVKNLPRNTSEHE 720
Query: 218 LKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYA 277
L S GF L + P+ F +FE+V A+ + + ++L +S +GG+ + ++
Sbjct: 721 LMMIFSKQKGFKRLCLGTEQNGPMCFVEFEDVAFATKCTQEINGTSLQNSTKGGIWLSFS 780
Query: 278 RSKM 281
++ +
Sbjct: 781 KNPL 784
>gi|346977589|gb|EGY21041.1| RNA binding protein [Verticillium dahliae VdLs.17]
Length = 508
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +E+ELK S G+ L R + P+ F +FE+V A+ A+ L
Sbjct: 322 PCNTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNGPMCFVEFEDVTFATKALNEL 381
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 382 YGQPLHNSVKGGIRLSFSKNPL 403
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ +F ++ G+ +L + + N + F F
Sbjct: 312 PPVNPADQNPPCNTLYVGNLPIDTSEEELKAMFSKQRGYK--RLCFRTKQNGPMCFVEFE 369
Query: 84 NHQTAVAALHELNG 97
+ A AL+EL G
Sbjct: 370 DVTFATKALNELYG 383
>gi|226286959|gb|EEH42472.1| RNA binding protein [Paracoccidioides brasiliensis Pb18]
Length = 582
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK + G+ L R + P+ F +FE++ A+ A+ L
Sbjct: 378 PCNTLYVGNLPHDTSEDELKSLFTKQRGYKRLCFRNKQNGPMCFVEFEDISFATKALHEL 437
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 438 YGYQLSNSVKGGIRLSFSKNPL 459
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ +LF ++ G+ +L + + N + F F
Sbjct: 368 PPVNPADQNPPCNTLYVGNLPHDTSEDELKSLFTKQRGYK--RLCFRNKQNGPMCFVEFE 425
Query: 84 NHQTAVAALHELNGVKFD 101
+ A ALHEL G +
Sbjct: 426 DISFATKALHELYGYQLS 443
>gi|225683351|gb|EEH21635.1| RNA-binding protein Scw1 [Paracoccidioides brasiliensis Pb03]
Length = 594
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK + G+ L R + P+ F +FE++ A+ A+ L
Sbjct: 390 PCNTLYVGNLPHDTSEDELKSLFTKQRGYKRLCFRNKQNGPMCFVEFEDISFATKALHEL 449
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 450 YGYQLSNSVKGGIRLSFSKNPL 471
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ +LF ++ G+ +L + + N + F F
Sbjct: 380 PPVNPADQNPPCNTLYVGNLPHDTSEDELKSLFTKQRGYK--RLCFRNKQNGPMCFVEFE 437
Query: 84 NHQTAVAALHELNGVKFD 101
+ A ALHEL G +
Sbjct: 438 DISFATKALHELYGYQLS 455
>gi|340519782|gb|EGR50020.1| predicted protein [Trichoderma reesei QM6a]
Length = 660
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + EDELK S+ G+ + R + P+ F ++E++ A+ A+ L
Sbjct: 443 PCNTLYVGNLPMDACEDELKVLFSLTKGYKRMCFRIKHNGPMCFVEYEDIAHATKALTTL 502
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 503 YGFPLHNSVKGGIRLSFSKNPL 524
>gi|295657738|ref|XP_002789435.1| RNA binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283857|gb|EEH39423.1| RNA binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 583
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK + G+ L R + P+ F +FE++ A+ A+ L
Sbjct: 379 PCNTLYVGNLPHDTSEDELKSLFTKQRGYKRLCFRNKQNGPMCFVEFEDISFATKALHEL 438
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 439 YGYQLSNSVKGGIRLSFSKNPL 460
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ +LF ++ G+ +L + + N + F F
Sbjct: 369 PPVNPADQNPPCNTLYVGNLPHDTSEDELKSLFTKQRGYK--RLCFRNKQNGPMCFVEFE 426
Query: 84 NHQTAVAALHELNGVKFD 101
+ A ALHEL G +
Sbjct: 427 DISFATKALHELYGYQLS 444
>gi|225558198|gb|EEH06482.1| RNA binding protein [Ajellomyces capsulatus G186AR]
Length = 591
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK + G+ L R + P+ F +FE++ A+ A+ L
Sbjct: 391 PCNTLYVGNLPHDTSEDELKALFTKQRGYKRLCFRNKQNGPMCFVEFEDISFATKALHEL 450
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 451 YGYQLSNSVKGGIRLSFSKNPL 472
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ LF ++ G+ +L + + N + F F
Sbjct: 381 PPVNPADQNPPCNTLYVGNLPHDTSEDELKALFTKQRGYK--RLCFRNKQNGPMCFVEFE 438
Query: 84 NHQTAVAALHELNGVKFD 101
+ A ALHEL G +
Sbjct: 439 DISFATKALHELYGYQLS 456
>gi|403216283|emb|CCK70780.1| hypothetical protein KNAG_0F01120 [Kazachstania naganishii CBS
8797]
Length = 635
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 8/90 (8%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMR-----ARGGMPVAFADFEEVEQASI 254
PC+TL++ NL P+ TE EL+ S GF L R G P+ F +F++V A+
Sbjct: 495 PCNTLYVGNLPPDATEQELRHLFSAQQGFRRLSFRNKNGNGNGHGPMCFVEFDDVSFATR 554
Query: 255 AMEGLQDSTLPS---SDRGGMHIEYARSKM 281
A+ L S LP S++GG+ + ++++ +
Sbjct: 555 ALAELYGSKLPRSTISNKGGIRLSFSKNPL 584
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGF---DFCQLKYTGRGNQVVAF 79
PPP + Q+ NTL+V LP D +E+ +LF + GF F G G+ + F
Sbjct: 484 PPPANPADQNPPCNTLYVGNLPPDATEQELRHLFSAQQGFRRLSFRNKNGNGNGHGPMCF 543
Query: 80 ATFVNHQTAVAALHELNGVKF 100
F + A AL EL G K
Sbjct: 544 VEFDDVSFATRALAELYGSKL 564
>gi|261201640|ref|XP_002628034.1| RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239590131|gb|EEQ72712.1| RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|327352905|gb|EGE81762.1| RNA binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 591
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK + G+ L R + P+ F +FE++ A+ A+ L
Sbjct: 391 PCNTLYVGNLPHDTSEDELKALFTKQRGYKRLCFRNKQNGPMCFVEFEDISFATKALHEL 450
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 451 YGYQLSNSVKGGIRLSFSKNPL 472
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ LF ++ G+ +L + + N + F F
Sbjct: 381 PPVNPADQNPPCNTLYVGNLPHDTSEDELKALFTKQRGYK--RLCFRNKQNGPMCFVEFE 438
Query: 84 NHQTAVAALHELNGVKFD 101
+ A ALHEL G +
Sbjct: 439 DISFATKALHELYGYQLS 456
>gi|408388147|gb|EKJ67837.1| hypothetical protein FPSE_11985 [Fusarium pseudograminearum CS3096]
Length = 571
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +E+ELK S G+ L R + P+ F +F++V A+ A+
Sbjct: 386 PCNTLYVGNLPGDASEEELKTLFSNARGYKRLCFRTKQNGPMCFVEFDDVSCATKALSDF 445
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
+ L +S +GG+ + ++++ +
Sbjct: 446 YGTPLHNSTKGGIRLSFSKNPL 467
>gi|380482693|emb|CCF41081.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 519
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +E+ELK S G+ L R + P+ F +FE+V A+ A+ L
Sbjct: 336 PCNTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNGPMCFVEFEDVSFATKALHEL 395
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 396 YGHPLHNSVKGGIRLSFSKNPL 417
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 14/93 (15%)
Query: 5 PYDPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDF 64
PY + PP++P Q+ NTL+V LP D E+ +F ++ G+
Sbjct: 319 PYGRHNFPPVNP------------ADQNPPCNTLYVGNLPIDTSEEELKAMFSKQRGYK- 365
Query: 65 CQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
+L + + N + F F + A ALHEL G
Sbjct: 366 -RLCFRTKQNGPMCFVEFEDVSFATKALHELYG 397
>gi|448106273|ref|XP_004200705.1| Piso0_003301 [Millerozyma farinosa CBS 7064]
gi|448109390|ref|XP_004201336.1| Piso0_003301 [Millerozyma farinosa CBS 7064]
gi|359382127|emb|CCE80964.1| Piso0_003301 [Millerozyma farinosa CBS 7064]
gi|359382892|emb|CCE80199.1| Piso0_003301 [Millerozyma farinosa CBS 7064]
Length = 496
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 17/99 (17%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-------------GGMPVAFADF 246
PC+TL++ NL P+ TE EL+ S GF L R + P+ F +F
Sbjct: 357 PCNTLYVGNLPPDATEQELRALFSPQKGFRRLSFRTKNSSSSNSGHSGSHNHGPMCFVEF 416
Query: 247 EEVEQASIAMEGLQDSTLP----SSDRGGMHIEYARSKM 281
E+V A+ A+ L TLP S+ +GG+ + ++++ +
Sbjct: 417 EDVAHATRALAELYGRTLPRPGGSNGKGGIRLSFSKNPL 455
>gi|154285786|ref|XP_001543688.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150407329|gb|EDN02870.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 408
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK + G+ L R + P+ F +FE++ A+ A+ L
Sbjct: 208 PCNTLYVGNLPHDTSEDELKALFTKQRGYKRLCFRNKQNGPMCFVEFEDISFATKALHEL 267
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 268 YGYQLSNSVKGGIRLSFSKNPL 289
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ LF ++ G+ +L + + N + F F
Sbjct: 198 PPVNPADQNPPCNTLYVGNLPHDTSEDELKALFTKQRGYK--RLCFRNKQNGPMCFVEFE 255
Query: 84 NHQTAVAALHELNGVKFD 101
+ A ALHEL G +
Sbjct: 256 DISFATKALHELYGYQLS 273
>gi|116193039|ref|XP_001222332.1| hypothetical protein CHGG_06237 [Chaetomium globosum CBS 148.51]
gi|88182150|gb|EAQ89618.1| hypothetical protein CHGG_06237 [Chaetomium globosum CBS 148.51]
Length = 650
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +E+ELK S G+ L R + P+ F +FE+V A+ A+ L
Sbjct: 463 PCNTLYVGNLPLDTSEEELKALFSRQRGYKRLCFRTKQNGPMCFVEFEDVTFATKALHDL 522
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 523 YGQLLHNSVKGGIRLSFSKNPL 544
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ LF R+ G+ +L + + N + F F
Sbjct: 453 PPANPADQNPPCNTLYVGNLPLDTSEEELKALFSRQRGYK--RLCFRTKQNGPMCFVEFE 510
Query: 84 NHQTAVAALHELNG 97
+ A ALH+L G
Sbjct: 511 DVTFATKALHDLYG 524
>gi|347839385|emb|CCD53957.1| hypothetical protein [Botryotinia fuckeliana]
Length = 545
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK S G+ L R + P+ F +FE+ A+ A+ L
Sbjct: 347 PCNTLYVGNLPIDTSEDELKSMFSKQRGYKRLCFRTKQNGPMCFVEFEDTSFATKALHEL 406
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 407 YGHPLHNSIKGGIRLSFSKNPL 428
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ ++F ++ G+ +L + + N + F F
Sbjct: 337 PPVNPADQNPPCNTLYVGNLPIDTSEDELKSMFSKQRGYK--RLCFRTKQNGPMCFVEFE 394
Query: 84 NHQTAVAALHELNG 97
+ A ALHEL G
Sbjct: 395 DTSFATKALHELYG 408
>gi|452843907|gb|EME45842.1| hypothetical protein DOTSEDRAFT_71515 [Dothistroma septosporum
NZE10]
Length = 623
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK G+ L R + P+ F +FE++ A+ A+ L
Sbjct: 384 PCNTLYVGNLPVDTSEDELKSLFMKQRGYRRLCFRTKQNGPMCFVEFEDISFATKALNEL 443
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 444 YGHPLHNSVKGGIRLSFSKNPL 465
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 19 PPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVA 78
P V PP + Q+ NTL+V LP D E+ +LF ++ G+ +L + + N +
Sbjct: 369 PKVQYPPVNPADQNPPCNTLYVGNLPVDTSEDELKSLFMKQRGYR--RLCFRTKQNGPMC 426
Query: 79 FATFVNHQTAVAALHELNG 97
F F + A AL+EL G
Sbjct: 427 FVEFEDISFATKALNELYG 445
>gi|302420163|ref|XP_003007912.1| RNA binding protein [Verticillium albo-atrum VaMs.102]
gi|261353563|gb|EEY15991.1| RNA binding protein [Verticillium albo-atrum VaMs.102]
Length = 450
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +E+ELK S G+ L R + P+ F +FE+V A+ A+ L
Sbjct: 264 PCNTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNGPMCFVEFEDVTFATKALNEL 323
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 324 YGQPLHNSVKGGIRLSFSKNPL 345
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ +F ++ G+ +L + + N + F F
Sbjct: 254 PPVNPADQNPPCNTLYVGNLPIDTSEEELKAMFSKQRGYK--RLCFRTKQNGPMCFVEFE 311
Query: 84 NHQTAVAALHELNG 97
+ A AL+EL G
Sbjct: 312 DVTFATKALNELYG 325
>gi|363754827|ref|XP_003647629.1| hypothetical protein Ecym_6441 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891266|gb|AET40812.1| hypothetical protein Ecym_6441 [Eremothecium cymbalariae
DBVPG#7215]
Length = 689
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMR-----ARGGMPVAFADFEEVEQASI 254
PC+TL++ NL P+ TE EL+Q S GF L R G P+ F +FE+V A+
Sbjct: 565 PCNTLYVGNLPPDATEQELRQLFSSQKGFRRLSFRNKNNNGNGHGPMCFVEFEDVAHATR 624
Query: 255 AMEGLQDSTLPSSD-----RGGMHIEYARSKM 281
A+ L S L ++ +GG+ + ++++ +
Sbjct: 625 ALAELYGSQLSRTNGSHNSKGGIRLSFSKNPL 656
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGF---DFCQLKYTGRGNQVVAF 79
PPP + Q+ NTL+V LP D +E+ LF + GF F G G+ + F
Sbjct: 554 PPPANPADQNPPCNTLYVGNLPPDATEQELRQLFSSQKGFRRLSFRNKNNNGNGHGPMCF 613
Query: 80 ATFVNHQTAVAALHELNGVKFDPQSGS 106
F + A AL EL G + +GS
Sbjct: 614 VEFEDVAHATRALAELYGSQLSRTNGS 640
>gi|45185072|ref|NP_982789.1| ABL158Cp [Ashbya gossypii ATCC 10895]
gi|44980708|gb|AAS50613.1| ABL158Cp [Ashbya gossypii ATCC 10895]
gi|374105991|gb|AEY94901.1| FABL158Cp [Ashbya gossypii FDAG1]
Length = 729
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMR-----ARGGMPVAFADFEEVEQASI 254
PC+TL++ NL P+ TE EL+Q S GF L R G P+ F +FE+V A+
Sbjct: 605 PCNTLYVGNLPPDATEQELRQLFSSQKGFRRLSFRNKNNNGNGHGPMCFVEFEDVAHATR 664
Query: 255 AMEGLQDSTLPSS-----DRGGMHIEYARSKM 281
A+ L S L + ++GG+ + ++++ +
Sbjct: 665 ALAELYGSQLARTSGTHNNKGGIRLSFSKNPL 696
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGF---DFCQLKYTGRGNQVVAF 79
PPP + Q+ NTL+V LP D +E+ LF + GF F G G+ + F
Sbjct: 594 PPPANPADQNPPCNTLYVGNLPPDATEQELRQLFSSQKGFRRLSFRNKNNNGNGHGPMCF 653
Query: 80 ATFVNHQTAVAALHELNGVKFDPQSGS 106
F + A AL EL G + SG+
Sbjct: 654 VEFEDVAHATRALAELYGSQLARTSGT 680
>gi|310791144|gb|EFQ26673.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 539
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +E+ELK S G+ L R + P+ F +FE+V A+ A+ L
Sbjct: 355 PCNTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNGPMCFVEFEDVSFATKALHEL 414
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 415 YGHPLHNSVKGGIRLSFSKNPL 436
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 14/93 (15%)
Query: 5 PYDPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDF 64
PY + PP++P Q+ NTL+V LP D E+ +F ++ G+
Sbjct: 338 PYGRHNFPPVNP------------ADQNPPCNTLYVGNLPIDTSEEELKAMFSKQRGYK- 384
Query: 65 CQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
+L + + N + F F + A ALHEL G
Sbjct: 385 -RLCFRTKQNGPMCFVEFEDVSFATKALHELYG 416
>gi|294658856|ref|XP_461195.2| DEHA2F19514p [Debaryomyces hansenii CBS767]
gi|202953439|emb|CAG89583.2| DEHA2F19514p [Debaryomyces hansenii CBS767]
Length = 529
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 17/99 (17%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM-------------PVAFADF 246
PC+TL++ NL P+ TE EL+ S GF L R + P+ F +F
Sbjct: 391 PCNTLYVGNLPPDATESELRALFSPQKGFRRLSFRTKNQSSSNPNQSSNHNHGPMCFVEF 450
Query: 247 EEVEQASIAMEGLQDSTLP----SSDRGGMHIEYARSKM 281
E+V A+ A+ L TLP S+ +GG+ + ++++ +
Sbjct: 451 EDVAHATRALAELYGRTLPRSGGSNGKGGIRLSFSKNPL 489
>gi|367021232|ref|XP_003659901.1| hypothetical protein MYCTH_2297450 [Myceliophthora thermophila ATCC
42464]
gi|347007168|gb|AEO54656.1| hypothetical protein MYCTH_2297450 [Myceliophthora thermophila ATCC
42464]
Length = 565
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +E+ELK S G+ L R + P+ F +FE+V A+ A+ L
Sbjct: 378 PCNTLYVGNLPLDTSEEELKAMFSRQRGYKRLCFRTKQNGPMCFVEFEDVTFATKALHEL 437
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 438 YGQPLHNSVKGGIRLSFSKNPL 459
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ +F R+ G+ +L + + N + F F
Sbjct: 368 PPANPADQNPPCNTLYVGNLPLDTSEEELKAMFSRQRGYK--RLCFRTKQNGPMCFVEFE 425
Query: 84 NHQTAVAALHELNG 97
+ A ALHEL G
Sbjct: 426 DVTFATKALHELYG 439
>gi|358374685|dbj|GAA91275.1| RNA binding protein [Aspergillus kawachii IFO 4308]
Length = 609
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL P+ +E+ELK S G+ L R + P+ F +F++V A A+ L
Sbjct: 402 PCNTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFDDVGTAGKALNEL 461
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S + G+ + ++++ +
Sbjct: 462 YGVKLSNSIKTGIRLSFSKNPL 483
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
NTL+V LP D E+ LF ++ G+ +L + + N + F F + TA AL+E
Sbjct: 403 CNTLYVGNLPPDTSEEELKALFSKQRGYK--RLCFRNKQNGPMCFVEFDDVGTAGKALNE 460
Query: 95 LNGVKF 100
L GVK
Sbjct: 461 LYGVKL 466
>gi|145235395|ref|XP_001390346.1| RNA binding protein [Aspergillus niger CBS 513.88]
gi|134058028|emb|CAK38257.1| unnamed protein product [Aspergillus niger]
Length = 611
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL P+ +E+ELK S G+ L R + P+ F +F++V A A+ L
Sbjct: 404 PCNTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFDDVGTAGKALNEL 463
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S + G+ + ++++ +
Sbjct: 464 YGVKLSNSIKTGIRLSFSKNPL 485
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
NTL+V LP D E+ LF ++ G+ +L + + N + F F + TA AL+E
Sbjct: 405 CNTLYVGNLPPDTSEEELKALFSKQRGYK--RLCFRNKQNGPMCFVEFDDVGTAGKALNE 462
Query: 95 LNGVKF 100
L GVK
Sbjct: 463 LYGVKL 468
>gi|350632868|gb|EHA21235.1| hypothetical protein ASPNIDRAFT_54716 [Aspergillus niger ATCC 1015]
Length = 611
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL P+ +E+ELK S G+ L R + P+ F +F++V A A+ L
Sbjct: 404 PCNTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFDDVGTAGKALNEL 463
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S + G+ + ++++ +
Sbjct: 464 YGVKLSNSIKTGIRLSFSKNPL 485
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
NTL+V LP D E+ LF ++ G+ +L + + N + F F + TA AL+E
Sbjct: 405 CNTLYVGNLPPDTSEEELKALFSKQRGYK--RLCFRNKQNGPMCFVEFDDVGTAGKALNE 462
Query: 95 LNGVKF 100
L GVK
Sbjct: 463 LYGVKL 468
>gi|398405022|ref|XP_003853977.1| hypothetical protein MYCGRDRAFT_38046 [Zymoseptoria tritici IPO323]
gi|339473860|gb|EGP88953.1| hypothetical protein MYCGRDRAFT_38046 [Zymoseptoria tritici IPO323]
Length = 499
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK S G+ L R + P+ F +FE+ A+ + L
Sbjct: 304 PCNTLYVGNLPIDTSEDELKSLFSKQRGYKRLCFRTKQNGPMCFVEFEDTSFATKTLHEL 363
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 364 YGHPLHNSVKGGIRLSFSKNPL 385
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ +LF ++ G+ +L + + N + F F
Sbjct: 294 PPVNPADQNPPCNTLYVGNLPIDTSEDELKSLFSKQRGYK--RLCFRTKQNGPMCFVEFE 351
Query: 84 NHQTAVAALHELNG 97
+ A LHEL G
Sbjct: 352 DTSFATKTLHELYG 365
>gi|320580822|gb|EFW95044.1| hypothetical protein HPODL_3416 [Ogataea parapolymorpha DL-1]
Length = 602
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM---------PVAFADFEEVE 250
PC+TL++ NL P+ TE EL+ GF L R + P+ F +FE+V
Sbjct: 447 PCNTLYVGNLPPDATELELRTLFQPQKGFRRLSFRTKQNTGNGSSSHHGPMCFVEFEDVA 506
Query: 251 QASIAMEGLQDSTLP------SSDRGGMHIEYARSKM 281
A+ A+ L TLP S+++GG+ + ++++ +
Sbjct: 507 YATRALAELYGRTLPRANGSTSNNKGGIRLSFSKNPL 543
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGF---DFCQLKYTGRGNQV--- 76
PPP + Q+ NTL+V LP D E+ LF+ + GF F + TG G+
Sbjct: 436 PPPANPADQNPPCNTLYVGNLPPDATELELRTLFQPQKGFRRLSFRTKQNTGNGSSSHHG 495
Query: 77 -VAFATFVNHQTAVAALHELNGVKFDPQSGSV 107
+ F F + A AL EL G +GS
Sbjct: 496 PMCFVEFEDVAYATRALAELYGRTLPRANGST 527
>gi|67901426|ref|XP_680969.1| hypothetical protein AN7700.2 [Aspergillus nidulans FGSC A4]
gi|40742696|gb|EAA61886.1| hypothetical protein AN7700.2 [Aspergillus nidulans FGSC A4]
gi|259484045|tpe|CBF79932.1| TPA: RNA binding protein (AFU_orthologue; AFUA_5G08330)
[Aspergillus nidulans FGSC A4]
Length = 628
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL P+ E+ELK S G+ L R + P+ F +FE+V A + L
Sbjct: 411 PCNTLYVGNLPPDTQEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFEDVRTAGKTLNEL 470
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S + G+ + ++++ +
Sbjct: 471 YGYKLSNSIKTGIRLSFSKNPL 492
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
NTL+V LP D + E+ LF ++ G+ +L + + N + F F + +TA L+EL
Sbjct: 413 NTLYVGNLPPDTQEEELKALFSKQRGYK--RLCFRNKQNGPMCFVEFEDVRTAGKTLNEL 470
Query: 96 NGVKF 100
G K
Sbjct: 471 YGYKL 475
>gi|255731644|ref|XP_002550746.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131755|gb|EER31314.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 665
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 17/99 (17%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM-------------PVAFADF 246
PC+TL++ NL P+ TE EL+ S GF L R + P+ F +F
Sbjct: 521 PCNTLYVGNLPPDATEAELRTLFSPQKGFRRLSFRTKNQSSTNGSGSTSHNHGPMCFVEF 580
Query: 247 EEVEQASIAMEGLQDSTLPSSD----RGGMHIEYARSKM 281
E+V A+ A+ L S LP + +GG+ + ++++ +
Sbjct: 581 EDVAHATRALAELYGSALPRPNGGNGKGGIRLSFSKNPL 619
>gi|453085210|gb|EMF13253.1| hypothetical protein SEPMUDRAFT_148613 [Mycosphaerella populorum
SO2202]
Length = 568
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK S G+ L R + + F +FE+V A+ A+ L
Sbjct: 373 PCNTLYVGNLPVDTSEDELKALFSKVRGYKRLCFRTKHQGSMCFVEFEDVSFATKALNEL 432
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 433 YGIPLHNSTKGGIRLSFSKNPL 454
>gi|154303210|ref|XP_001552013.1| hypothetical protein BC1G_09625 [Botryotinia fuckeliana B05.10]
Length = 266
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + +EDELK S G+ L R + P+ F +FE+ A+ A+ L
Sbjct: 68 PCNTLYVGNLPIDTSEDELKSMFSKQRGYKRLCFRTKQNGPMCFVEFEDTSFATKALHEL 127
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S +GG+ + ++++ +
Sbjct: 128 YGHPLHNSIKGGIRLSFSKNPL 149
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
PP + Q+ NTL+V LP D E+ ++F ++ G+ +L + + N + F F
Sbjct: 58 PPVNPADQNPPCNTLYVGNLPIDTSEDELKSMFSKQRGYK--RLCFRTKQNGPMCFVEFE 115
Query: 84 NHQTAVAALHELNG 97
+ A ALHEL G
Sbjct: 116 DTSFATKALHELYG 129
>gi|15226631|ref|NP_182280.1| spliceosomal protein U1A [Arabidopsis thaliana]
gi|75319458|sp|Q39244.1|RU1A_ARATH RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
protein A
gi|1050430|emb|CAA90283.1| U1snRNP-specific protein [Arabidopsis thaliana]
gi|2529669|gb|AAC62852.1| small nuclear ribonucleoprotein U1A [Arabidopsis thaliana]
gi|15450591|gb|AAK96567.1| At2g47580/T30B22.12 [Arabidopsis thaliana]
gi|16649011|gb|AAL24357.1| small nuclear ribonucleoprotein U1A [Arabidopsis thaliana]
gi|20259986|gb|AAM13340.1| small nuclear ribonucleoprotein U1A [Arabidopsis thaliana]
gi|22655484|gb|AAM98334.1| At2g47580/T30B22.12 [Arabidopsis thaliana]
gi|330255767|gb|AEC10861.1| spliceosomal protein U1A [Arabidopsis thaliana]
Length = 250
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 113/262 (43%), Gaps = 51/262 (19%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV----------NHQ 86
T++++ L + V+ E+ ++ F Q G+ +++AF TF N +
Sbjct: 19 TIYINNLNEKVKLDEL----KKSLNAVFSQF---GKILEILAFKTFKHKGQAWVVFDNTE 71
Query: 87 TAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSS 146
+A A+ ++N F + + I+ A++ S K G +V +KR + E
Sbjct: 72 SASTAIAKMNNFPFYDKE---MRIQYAKTKSDVVAK-ADGTFVPREKRKRHEEKGGGKKK 127
Query: 147 ADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPC----- 201
D D+ + ++SA G + AP S+ PY GG++P
Sbjct: 128 KDQHHDSTQMG--MPMNSAYPGVY-------------GAAPPLSQVPYPGGMKPNMPEAP 172
Query: 202 ----STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAM 256
+ LF+ NL T L+ Y GF ++M A+ G +AF +F + Q+++AM
Sbjct: 173 APPNNILFVQNLPHETTPMVLQMLFCQYQGFKEVRMIEAKPG--IAFVEFADEMQSTVAM 230
Query: 257 EGLQDSTLPSSDRGGMHIEYAR 278
+GLQ + + M I YA+
Sbjct: 231 QGLQGFKI---QQNQMLITYAK 249
>gi|313242687|emb|CBY39480.1| unnamed protein product [Oikopleura dioica]
Length = 196
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%)
Query: 32 DNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
++G+ TL+++GLP DV+ REI NLF+ P F+ +K + +AFATF + A +A
Sbjct: 115 EDGVRTLYIAGLPCDVKHREIRNLFQHIPEFEGAVIKSSHGHIHPIAFATFSTVEAAKSA 174
Query: 92 LHELNGVKFD 101
E +G + D
Sbjct: 175 KLEYSGYQMD 184
>gi|242790607|ref|XP_002481586.1| RNA binding protein [Talaromyces stipitatus ATCC 10500]
gi|218718174|gb|EED17594.1| RNA binding protein [Talaromyces stipitatus ATCC 10500]
Length = 546
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + E+ELK S G+ L R + P+ F +F+EV AS A+ L
Sbjct: 338 PCNTLYVGNLPADTQEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFDEVAMASKALNEL 397
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S + G+ + ++++ +
Sbjct: 398 YGYKLSNSVKTGIRLSFSKNPL 419
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
NTL+V LP D + E+ LF ++ G+ +L + + N + F F A AL+EL
Sbjct: 340 NTLYVGNLPADTQEEELKALFSKQRGYK--RLCFRNKQNGPMCFVEFDEVAMASKALNEL 397
Query: 96 NGVKF 100
G K
Sbjct: 398 YGYKL 402
>gi|212534592|ref|XP_002147452.1| RNA binding protein [Talaromyces marneffei ATCC 18224]
gi|210069851|gb|EEA23941.1| RNA binding protein [Talaromyces marneffei ATCC 18224]
Length = 591
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL + E+ELK S G+ L R + P+ F +F+EV AS A+ L
Sbjct: 383 PCNTLYVGNLPADTQEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFDEVAMASKALNEL 442
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S + G+ + ++++ +
Sbjct: 443 YGYKLSNSVKTGIRLSFSKNPL 464
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 17/93 (18%)
Query: 24 PPYHHQQQDNG---------------INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLK 68
PP+H+ Q N NTL+V LP D + E+ LF ++ G+ +L
Sbjct: 358 PPFHYPNQHNPRHSLPAANPNDLNPPCNTLYVGNLPADTQEEELKALFSKQRGYK--RLC 415
Query: 69 YTGRGNQVVAFATFVNHQTAVAALHELNGVKFD 101
+ + N + F F A AL+EL G K
Sbjct: 416 FRNKQNGPMCFVEFDEVAMASKALNELYGYKLS 448
>gi|83772293|dbj|BAE62423.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 566
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL P+ +E+ELK G+ L R + P+ F +FE+V A ++ L
Sbjct: 355 PCNTLYVGNLPPDASEEELKALFMKQRGYKRLCFRNKQNGPMCFVEFEDVGTAGKSLNEL 414
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S + G+ + ++++ +
Sbjct: 415 YGYKLSNSIKTGIRLSFSKNPL 436
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
NTL+V LP D E+ LF ++ G+ +L + + N + F F + TA +L+EL
Sbjct: 357 NTLYVGNLPPDASEEELKALFMKQRGYK--RLCFRNKQNGPMCFVEFEDVGTAGKSLNEL 414
Query: 96 NGVKF 100
G K
Sbjct: 415 YGYKL 419
>gi|238495454|ref|XP_002378963.1| RNA binding protein [Aspergillus flavus NRRL3357]
gi|317149634|ref|XP_001823556.2| RNA binding protein [Aspergillus oryzae RIB40]
gi|220695613|gb|EED51956.1| RNA binding protein [Aspergillus flavus NRRL3357]
gi|391872269|gb|EIT81403.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 614
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL P+ +E+ELK G+ L R + P+ F +FE+V A ++ L
Sbjct: 403 PCNTLYVGNLPPDASEEELKALFMKQRGYKRLCFRNKQNGPMCFVEFEDVGTAGKSLNEL 462
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S + G+ + ++++ +
Sbjct: 463 YGYKLSNSIKTGIRLSFSKNPL 484
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
NTL+V LP D E+ LF ++ G+ +L + + N + F F + TA +L+EL
Sbjct: 405 NTLYVGNLPPDASEEELKALFMKQRGYK--RLCFRNKQNGPMCFVEFEDVGTAGKSLNEL 462
Query: 96 NGVKF 100
G K
Sbjct: 463 YGYKL 467
>gi|259149165|emb|CAY82407.1| Whi3p [Saccharomyces cerevisiae EC1118]
gi|365763510|gb|EHN05038.1| Whi3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 661
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM-------PVAFADFEEVEQA 252
PC+TL++ NL + TE EL+Q S GF L R + P+ F +F++V A
Sbjct: 536 PCNTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFA 595
Query: 253 SIAMEGLQDSTLPS---SDRGGMHIEYARSKM 281
+ A+ L + LP S +GG+ + ++++ +
Sbjct: 596 TRALAELYGTQLPRSTVSSKGGIRLSFSKNPL 627
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLK-----YTGRGNQVV 77
PPP + Q+ NTL+V LP D +E+ LF + GF + G + +
Sbjct: 525 PPPANPADQNPPCNTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPM 584
Query: 78 AFATFVNHQTAVAALHELNGVKF 100
F F + A AL EL G +
Sbjct: 585 CFVEFDDVSFATRALAELYGTQL 607
>gi|15227729|ref|NP_180585.1| U2 small nuclear ribonucleoprotein B'' [Arabidopsis thaliana]
gi|75318049|sp|O22922.1|RU2B1_ARATH RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|2347192|gb|AAC16931.1| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
gi|27765024|gb|AAO23633.1| At2g30260 [Arabidopsis thaliana]
gi|110743428|dbj|BAE99600.1| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
gi|330253269|gb|AEC08363.1| U2 small nuclear ribonucleoprotein B'' [Arabidopsis thaliana]
Length = 232
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 100/250 (40%), Gaps = 37/250 (14%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFAT-------FVNHQTAV 89
++++ L + ++ E+ +C GR VVA T +V
Sbjct: 11 SIYIQNLNERIKKEELKRSL-------YCLFSQFGRILDVVALKTPKLRGQAWVTFSEVT 63
Query: 90 AALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADG 149
AA H + ++ P + ++ A++ S K G +V DK+ K E V E D
Sbjct: 64 AAGHAVRQMQNFPFYDKPMRLQYAKAKSDCLAK-AEGTFVPKDKKRKQEEKV-ERKREDS 121
Query: 150 DSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANL 209
P N SA+ G + SG P P + LFI NL
Sbjct: 122 QRPNTANGPSANGPSANNG----VPAPSFQPSGQETMP------------PNNILFIQNL 165
Query: 210 GPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSD 268
T L+ YPGF ++M A+ G +AF ++E+ QASIAM+ LQ + +
Sbjct: 166 PHETTSMMLQLLFEQYPGFKEIRMIDAKPG--IAFVEYEDDVQASIAMQPLQGFKI--TP 221
Query: 269 RGGMHIEYAR 278
+ M I +A+
Sbjct: 222 QNPMVISFAK 231
>gi|440800677|gb|ELR21712.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 341
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 109/289 (37%), Gaps = 48/289 (16%)
Query: 34 GINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALH 93
G LF++ +P +V E + F +PG+ +L+ R V F F +H++A A
Sbjct: 44 GSTALFIAEIPLEVTEAEFRSTFSSEPGYISARLR-RDRNENTVGFVEFSDHKSAAEARE 102
Query: 94 ELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDT 153
+ N KF + I A +SR K + K ++ Q SSS G ++
Sbjct: 103 QFNNFKFSHNDDHGITIHFAHEHSRNKHRERDDG-----KHYGSQHYDQPSSSRKGYNNG 157
Query: 154 ----DEASPVRNIDSADKGDFV-----------------TTQSERATDSGNAVAPINSEK 192
D +R D + T+ + VAP
Sbjct: 158 GYRHDGYGSMRAADVNSRVSLTSGLPLVPMGVSPMMPGPTSLDMSGMQFYSTVAPNAQFA 217
Query: 193 PYEGGVQPCS-----------TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGG--- 238
Y VQP + TL++ L + TE E+ PG+ ++++ +
Sbjct: 218 SY---VQPQAYSPQLSPDAAPTLYVEGLPLDATEREVAHIFRQMPGYLGIRIKPKESKQH 274
Query: 239 ----MPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKMRK 283
+ + +FE A++A+ L+ + +D G+ I YA++ ++
Sbjct: 275 PSRVFNLCWVEFETKYNAAVALHHLKGYKMDKNDTKGLTISYAKTTRKE 323
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 21 VPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQ----- 75
V P Y Q + TL+V GLP D RE+ ++FR+ PG+ ++K
Sbjct: 220 VQPQAYSPQLSPDAAPTLYVEGLPLDATEREVAHIFRQMPGYLGIRIKPKESKQHPSRVF 279
Query: 76 VVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKP 123
+ + F A ALH L G K D L I A++ +++R P
Sbjct: 280 NLCWVEFETKYNAAVALHHLKGYKMDKNDTKGLTISYAKTTRKERRGP 327
>gi|50288333|ref|XP_446595.1| hypothetical protein [Candida glabrata CBS 138]
gi|42557534|emb|CAE84437.1| putative Whi3 protein [Candida glabrata]
gi|49525903|emb|CAG59522.1| unnamed protein product [Candida glabrata]
Length = 671
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-------GGMPVAFADFEEVEQA 252
PC+TL++ NL + TE EL+Q S GF L R + G P+ F +F++V A
Sbjct: 542 PCNTLYVGNLPSDATEQELRQLFSNQFGFRRLSFRNKNANGTGHGHGPMCFVEFDDVSCA 601
Query: 253 SIAMEGLQDSTLPSS---DRGGMHIEYARSKM 281
+ A+ L S LP + +GG+ + ++++ +
Sbjct: 602 TRALVELYGSQLPRATVNTKGGIRLSFSKNPL 633
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKY-----TGRGNQVV 77
PPP + Q+ NTL+V LP D +E+ LF + GF + TG G+ +
Sbjct: 531 PPPANPADQNPPCNTLYVGNLPSDATEQELRQLFSNQFGFRRLSFRNKNANGTGHGHGPM 590
Query: 78 AFATFVNHQTAVAALHELNGVKF 100
F F + A AL EL G +
Sbjct: 591 CFVEFDDVSCATRALVELYGSQL 613
>gi|170052646|ref|XP_001862317.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873472|gb|EDS36855.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 189
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 52/120 (43%), Gaps = 38/120 (31%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLS------------------------------------ 223
PCSTLF+ANLG +E ELK+ +
Sbjct: 51 PCSTLFVANLGQFVSEHELKEIFASKGTSIAATNTTTTPTMNANAAAAGNHYHAAVNNNN 110
Query: 224 --VYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
+ NM +PVAF +F++V A+ AM LQ L SSDRG M IE+A+SKM
Sbjct: 111 IANFINNNMAAAATTTTVPVAFVEFKDVATAAAAMSALQGKFLLSSDRGAMRIEFAKSKM 170
>gi|190344482|gb|EDK36163.2| hypothetical protein PGUG_00261 [Meyerozyma guilliermondii ATCC
6260]
Length = 589
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 17/99 (17%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM-------------PVAFADF 246
PC+TL++ NL P+ TE EL+ S GF L R + P+ F +F
Sbjct: 454 PCNTLYVGNLPPDATEAELRALFSPQKGFRRLSFRTKNQSSAGPSSATSHNHGPMCFVEF 513
Query: 247 EEVEQASIAMEGLQDSTLP----SSDRGGMHIEYARSKM 281
E+V A+ A+ L LP S+ +GG+ + ++++ +
Sbjct: 514 EDVAHATRALAELYGRALPRPNGSNGKGGIRLSFSKNPL 552
>gi|401881585|gb|EJT45883.1| cell wall integrity protein scw1 [Trichosporon asahii var. asahii
CBS 2479]
Length = 308
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 200 PCSTLFIANLG--------PNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQ 251
P +TL+I NL PN E+ L+ PGF + R + P+ F +FE++
Sbjct: 9 PINTLYIGNLPAISPPTHPPNFLEESLRALFQRRPGFKRMSFRQKINGPMCFVEFEDIPY 68
Query: 252 ASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
A+ AM L +TL +GG+ + Y+++ +
Sbjct: 69 ATQAMRELYGNTLSGLVKGGIRLSYSKNSL 98
>gi|406606818|emb|CCH41854.1| RNA-binding protein [Wickerhamomyces ciferrii]
Length = 558
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 21/103 (20%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-------GGM----------PVA 242
PC+TL++ NL P+ TE EL+Q S GF L R + G + P+
Sbjct: 436 PCNTLYVGNLPPDATEAELRQLFSPQRGFRRLSFRTKTQPLNGNGQLNSAGSSHSHGPMC 495
Query: 243 FADFEEVEQASIAMEGLQDSTLPS----SDRGGMHIEYARSKM 281
F +FE+V A+ A+ L TLP +GG+ + ++++ +
Sbjct: 496 FVEFEDVAYATRALAELYGRTLPRPGGVPGKGGIRLSFSKNPL 538
>gi|323335900|gb|EGA77178.1| Whi3p [Saccharomyces cerevisiae Vin13]
Length = 629
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM-------PVAFADFEEVEQA 252
PC+TL++ NL + TE EL+Q S GF L R + P+ F +F++V A
Sbjct: 536 PCNTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFA 595
Query: 253 SIAMEGLQDSTLPS---SDRGGMHIEYAR 278
+ A+ L LP S +GG+ + +++
Sbjct: 596 TRALAELYGXQLPRSTVSSKGGIRLSFSK 624
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLK-----YTGRGNQVV 77
PPP + Q+ NTL+V LP D +E+ LF + GF + G + +
Sbjct: 525 PPPANPADQNPPCNTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPM 584
Query: 78 AFATFVNHQTAVAALHELNGVKF 100
F F + A AL EL G +
Sbjct: 585 CFVEFDDVSFATRALAELYGXQL 607
>gi|323346831|gb|EGA81110.1| Whi3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 629
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM-------PVAFADFEEVEQA 252
PC+TL++ NL + TE EL+Q S GF L R + P+ F +F++V A
Sbjct: 536 PCNTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFA 595
Query: 253 SIAMEGLQDSTLPS---SDRGGMHIEYAR 278
+ A+ L LP S +GG+ + +++
Sbjct: 596 TRALAELYGXQLPRSTVSSKGGIRLSFSK 624
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGF---DFCQLKYTGRGNQV--V 77
PPP + Q+ NTL+V LP D +E+ LF + GF F T G+ +
Sbjct: 525 PPPANPADQNPPCNTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPM 584
Query: 78 AFATFVNHQTAVAALHELNGVKF 100
F F + A AL EL G +
Sbjct: 585 CFVEFDDVSFATRALAELYGXQL 607
>gi|6324132|ref|NP_014202.1| Whi3p [Saccharomyces cerevisiae S288c]
gi|465481|sp|P34761.1|WHI3_YEAST RecName: Full=Protein WHI3
gi|393077|gb|AAA03320.1| Whi3p [Saccharomyces cerevisiae]
gi|600068|emb|CAA55511.1| N1382 [Saccharomyces cerevisiae]
gi|1302195|emb|CAA96092.1| WHI3 [Saccharomyces cerevisiae]
gi|285814462|tpg|DAA10356.1| TPA: Whi3p [Saccharomyces cerevisiae S288c]
gi|392296797|gb|EIW07898.1| Whi3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 661
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM-------PVAFADFEEVEQA 252
PC+TL++ NL + TE EL+Q S GF L R + P+ F +F++V A
Sbjct: 536 PCNTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFA 595
Query: 253 SIAMEGLQDSTLPS---SDRGGMHIEYARSKM 281
+ A+ L LP S +GG+ + ++++ +
Sbjct: 596 TRALAELYGRQLPRSTVSSKGGIRLSFSKNPL 627
>gi|365758778|gb|EHN00605.1| Whi3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 664
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM-------PVAFADFEEVEQA 252
PC+TL++ NL + TE EL+Q S GF L R + P+ F +F++V A
Sbjct: 539 PCNTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFA 598
Query: 253 SIAMEGLQDSTLPS---SDRGGMHIEYARSKM 281
+ A+ L LP S +GG+ + ++++ +
Sbjct: 599 TRALAELYGRQLPRSTVSSKGGIRLSFSKNPL 630
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLK-----YTGRGNQVV 77
PPP + Q+ NTL+V LP D +E+ LF + GF + G + +
Sbjct: 528 PPPANPADQNPPCNTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPM 587
Query: 78 AFATFVNHQTAVAALHELNGVKF 100
F F + A AL EL G +
Sbjct: 588 CFVEFDDVSFATRALAELYGRQL 610
>gi|323303359|gb|EGA57155.1| Whi3p [Saccharomyces cerevisiae FostersB]
Length = 661
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM-------PVAFADFEEVEQA 252
PC+TL++ NL + TE EL+Q S GF L R + P+ F +F++V A
Sbjct: 536 PCNTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFA 595
Query: 253 SIAMEGLQDSTLPS---SDRGGMHIEYARSKM 281
+ A+ L LP S +GG+ + ++++ +
Sbjct: 596 TRALAELYGRQLPRSTVSSKGGIRLSFSKNPL 627
>gi|207341833|gb|EDZ69780.1| YNL197Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 661
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM-------PVAFADFEEVEQA 252
PC+TL++ NL + TE EL+Q S GF L R + P+ F +F++V A
Sbjct: 536 PCNTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFA 595
Query: 253 SIAMEGLQDSTLPS---SDRGGMHIEYARSKM 281
+ A+ L LP S +GG+ + ++++ +
Sbjct: 596 TRALAELYGRQLPRSTVSSKGGIRLSFSKNPL 627
>gi|256270770|gb|EEU05931.1| Whi3p [Saccharomyces cerevisiae JAY291]
Length = 661
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM-------PVAFADFEEVEQA 252
PC+TL++ NL + TE EL+Q S GF L R + P+ F +F++V A
Sbjct: 536 PCNTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFA 595
Query: 253 SIAMEGLQDSTLPS---SDRGGMHIEYARSKM 281
+ A+ L LP S +GG+ + ++++ +
Sbjct: 596 TRALAELYGRQLPRSTVSSKGGIRLSFSKNPL 627
>gi|151944344|gb|EDN62622.1| whiskey [Saccharomyces cerevisiae YJM789]
Length = 661
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM-------PVAFADFEEVEQA 252
PC+TL++ NL + TE EL+Q S GF L R + P+ F +F++V A
Sbjct: 536 PCNTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFA 595
Query: 253 SIAMEGLQDSTLPS---SDRGGMHIEYARSKM 281
+ A+ L LP S +GG+ + ++++ +
Sbjct: 596 TRALAELYGRQLPRSTVSSKGGIRLSFSKNPL 627
>gi|349580746|dbj|GAA25905.1| K7_Whi3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 661
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM-------PVAFADFEEVEQA 252
PC+TL++ NL + TE EL+Q S GF L R + P+ F +F++V A
Sbjct: 536 PCNTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFA 595
Query: 253 SIAMEGLQDSTLPS---SDRGGMHIEYARSKM 281
+ A+ L LP S +GG+ + ++++ +
Sbjct: 596 TRALAELYGRQLPRSTVSSKGGIRLSFSKNPL 627
>gi|224286216|gb|ACN40817.1| unknown [Picea sitchensis]
Length = 308
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 28 HQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKY-------TGRGNQVVAFA 80
H + D NT+F+ GLP D RE+ ++FR P + Q+K G V+ F
Sbjct: 196 HLKPDESSNTIFIEGLPADCSRREVAHIFR--PFIGYKQIKVIHKEPRRAGGEPYVLCFV 253
Query: 81 TFVNHQTAVAALHELNGVKFDPQ---SGSVLHIELA 113
F + + A+ AL L G KFD S S L ++LA
Sbjct: 254 EFTDAKCALTALSALKGYKFDEHEHDSSSSLKLQLA 289
>gi|328352765|emb|CCA39163.1| Protein WHI4 [Komagataella pastoris CBS 7435]
Length = 496
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM---------PVAFADFEEVE 250
PC+TL++ NL + TE EL+ + GF L + + + P+ F +F +
Sbjct: 380 PCNTLYVGNLPGDATEAELRSLFTPVKGFRRLSFKNKTSISGSSGGGGGPMCFVEFNSIT 439
Query: 251 QASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
+A+ A+ L ++L S +GG+ + ++++ +
Sbjct: 440 EAAEALANLYGTSLRCSSKGGIRLSFSKNPL 470
>gi|115433500|ref|XP_001216887.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114189739|gb|EAU31439.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 599
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+TL++ NL P+ +E+ELK G+ L R + P+ F +FE+V A + L
Sbjct: 402 PCNTLYVGNLPPDASEEELKALFIKQRGYKRLCFRNKQNGPMCFVEFEDVGTAGKTLHEL 461
Query: 260 QDSTLPSSDRGGMHIEYARSKM 281
L +S + G+ + ++++ +
Sbjct: 462 YGYRLSNSVKTGIRLSFSKNPL 483
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
NTL+V LP D E+ LF ++ G+ +L + + N + F F + TA LHE
Sbjct: 403 CNTLYVGNLPPDASEEELKALFIKQRGYK--RLCFRNKQNGPMCFVEFEDVGTAGKTLHE 460
Query: 95 LNGVKF 100
L G +
Sbjct: 461 LYGYRL 466
>gi|323352890|gb|EGA85192.1| Whi3p [Saccharomyces cerevisiae VL3]
Length = 629
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM-------PVAFADFEEVEQA 252
PC+TL++ NL + TE EL+Q S GF L R + P+ F +F++V A
Sbjct: 536 PCNTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFA 595
Query: 253 SIAMEGLQDSTLPS---SDRGGMHIEYAR 278
+ A+ L LP S +GG+ + +++
Sbjct: 596 TRALAELYGRQLPRSTVSSKGGIRLSFSK 624
>gi|449484269|ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
sativus]
Length = 242
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 110/251 (43%), Gaps = 34/251 (13%)
Query: 37 TLFVSGLPDDVRAREIH---NLFRRKPG-----FDFCQLKYTGRGNQVVAFATFVNHQTA 88
T++++ L + ++ E+ N + G F LK+ G+ A+ F +A
Sbjct: 16 TIYINNLNEKIKLEELKKSLNAVFSQFGKILEVLAFKTLKHKGQ-----AWVVFEEVSSA 70
Query: 89 VAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSAD 148
AL ++ G F + + I+ A++ S K G++V +KR + E ++
Sbjct: 71 TNALRQMQGFPFYDKP---MRIQYAKTKSDIIAK-SDGSFVPREKRKRHE---EKGRKKK 123
Query: 149 GDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIAN 208
D ++A ++ A G + T + SG + P E P S LF+ N
Sbjct: 124 EQHDANQAG--MGLNPAFAGAYGATAHSQVPYSGGVMVP-------EAPAPPNSILFVQN 174
Query: 209 LGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEGLQDSTLPSS 267
L T L+ YPGF ++M A+ G +AF ++ + Q+++AM+ LQ + +
Sbjct: 175 LPHETTPMMLQMLFCQYPGFKEVRMVEAKPG--IAFVEYSDEVQSTVAMQALQGFKM--N 230
Query: 268 DRGGMHIEYAR 278
+ M I YA+
Sbjct: 231 PQNSMLITYAK 241
>gi|406696600|gb|EKC99882.1| cell wall integrity protein scw1 [Trichosporon asahii var. asahii
CBS 8904]
Length = 926
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 200 PCSTLFIANLG--------PNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQ 251
P +TL+I NL PN E+ L+ PGF + R + P+ F +FE++
Sbjct: 627 PINTLYIGNLPAISPPTHPPNFLEESLRALFQRRPGFKRMSFRQKINGPMCFVEFEDIPY 686
Query: 252 ASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
A+ AM L +TL +GG+ + Y+++ +
Sbjct: 687 ATQAMRELYGNTLSGLVKGGIRLSYSKNSL 716
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKY---TGRGNQVVAFATFVNHQTA 88
I+T+FV G PDD+ RE N+F GF+ LK+ + R Q A + + H A
Sbjct: 230 ISTIFVVGFPDDMSEREFQNIFAFAQGFEAATLKFPSGSRREPQAAALLSELQHLAA 286
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 75 QVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
Q + FA F A+AA L G + DP +G+ L E+A+ N KR
Sbjct: 357 QTIGFARFKTRNDAIAARDHLQGRRIDPLTGATLKAEMAKKNLHTKR 403
>gi|254572223|ref|XP_002493221.1| RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci
[Komagataella pastoris GS115]
gi|238033019|emb|CAY71042.1| RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci
[Komagataella pastoris GS115]
Length = 497
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM---------PVAFADFEEVE 250
PC+TL++ NL + TE EL+ + GF L + + + P+ F +F +
Sbjct: 381 PCNTLYVGNLPGDATEAELRSLFTPVKGFRRLSFKNKTSISGSSGGGGGPMCFVEFNSIT 440
Query: 251 QASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
+A+ A+ L ++L S +GG+ + ++++ +
Sbjct: 441 EAAEALANLYGTSLRCSSKGGIRLSFSKNPL 471
>gi|401623965|gb|EJS42043.1| whi3p [Saccharomyces arboricola H-6]
Length = 664
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM-------PVAFADFEEVEQA 252
PC+TL++ NL + TE EL+Q S GF L R + P+ F +F++V A
Sbjct: 539 PCNTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFA 598
Query: 253 SIAMEGLQDSTLPS---SDRGGMHIEYARSKM 281
+ A+ L LP S +GG+ + ++++ +
Sbjct: 599 TRALAELYGRQLPRSTVSSKGGIRLSFSKNPL 630
>gi|195389855|ref|XP_002053589.1| GJ23264 [Drosophila virilis]
gi|194151675|gb|EDW67109.1| GJ23264 [Drosophila virilis]
Length = 274
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 46 DVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAALHELNGVKFDP 102
D + RE++ LFR G++ LK T + + V F TF A AA +L GV+FDP
Sbjct: 2 DAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAAKQDLQGVRFDP 61
Query: 103 QSGSVLHIELARSNSR-KKRKP 123
+ +E A+SN++ K KP
Sbjct: 62 DMPQTIRLEFAKSNTKVSKPKP 83
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 178 ATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLS 223
A + NA P N P PCSTLF+ANLG +E ELK+ S
Sbjct: 231 AGSTNNAAHPAN---PQIAANAPCSTLFVANLGQFVSEHELKEVFS 273
>gi|388500704|gb|AFK38418.1| unknown [Medicago truncatula]
Length = 252
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
+TL+V GLP D RE+ ++FR G+ +L K+ G ++ F F N A
Sbjct: 152 STLYVEGLPSDSTKREVAHIFRPFVGYREVRLVAKESKHRGGDPLILCFVDFANPACAAT 211
Query: 91 ALHELNGVKFD---PQSGSVLHIELARSNSRKKRKPG 124
AL L G K D P+S S L ++ +RS R+ PG
Sbjct: 212 ALSALQGYKVDEINPES-SYLRLQFSRSPGRRSGGPG 247
>gi|357443731|ref|XP_003592143.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355481191|gb|AES62394.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|388515921|gb|AFK46022.1| unknown [Medicago truncatula]
Length = 147
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
+TL+V GLP D RE+ ++FR G+ +L K+ G ++ F F N A
Sbjct: 47 STLYVEGLPSDSTKREVAHIFRPFVGYREVRLVAKESKHRGGDPLILCFVDFANPACAAT 106
Query: 91 ALHELNGVKFD---PQSGSVLHIELARSNSRKKRKPG 124
AL L G K D P+S S L ++ +RS R+ PG
Sbjct: 107 ALSALQGYKVDEINPES-SYLRLQFSRSPGRRSGGPG 142
>gi|357443729|ref|XP_003592142.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355481190|gb|AES62393.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 252
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
+TL+V GLP D RE+ ++FR G+ +L K+ G ++ F F N A
Sbjct: 152 STLYVEGLPSDSTKREVAHIFRPFVGYREVRLVAKESKHRGGDPLILCFVDFANPACAAT 211
Query: 91 ALHELNGVKFD---PQSGSVLHIELARSNSRKKRKPG 124
AL L G K D P+S S L ++ +RS R+ PG
Sbjct: 212 ALSALQGYKVDEINPES-SYLRLQFSRSPGRRSGGPG 247
>gi|413918505|gb|AFW58437.1| hypothetical protein ZEAMMB73_336478 [Zea mays]
Length = 242
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ T+F+ LP DV+ RE+HNL GF+ ++ + +GNQ + FA F A+ A
Sbjct: 83 VCTIFMD-LPADVKERELHNLLCWLLGFETSEMNF--KGNQPMGFALFSTVHQAITAKAM 139
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKR 121
FD ++ L ++A+ N KR
Sbjct: 140 FQDTVFDAETKVALQTDMAKKNLFVKR 166
>gi|225716164|gb|ACO13928.1| RNA-binding protein with multiple splicing [Esox lucius]
Length = 100
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F TF N A AA +
Sbjct: 20 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDNRTGAEAAKNA 77
Query: 95 LN 96
LN
Sbjct: 78 LN 79
>gi|255550095|ref|XP_002516098.1| conserved hypothetical protein [Ricinus communis]
gi|223544584|gb|EEF46100.1| conserved hypothetical protein [Ricinus communis]
Length = 243
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
N LFV GLP D RE+ +LFR G+ ++ + G V F F + + A+
Sbjct: 140 NILFVDGLPTDCTRREVGHLFRPFIGYKDIKVIHREPRRDGDKAMVYCFVEFADAKCAIT 199
Query: 91 ALHELNGVKFDPQSGS--VLHIELAR 114
A+ L G KFD + + VL I LAR
Sbjct: 200 AMEALQGYKFDDRRSNSPVLRIHLAR 225
>gi|150865889|ref|XP_001385283.2| Protein involved in regulation of cell size putative RNA binding
protein [Scheffersomyces stipitis CBS 6054]
gi|149387145|gb|ABN67254.2| Protein involved in regulation of cell size putative RNA binding
protein [Scheffersomyces stipitis CBS 6054]
Length = 732
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 19/101 (18%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM---------------PVAFA 244
PC+TL++ NL P+ TE EL+ S GF L R + P+ F
Sbjct: 585 PCNTLYVGNLPPDATEAELRALFSPQKGFRRLSFRTKNQSSGTSGSSGTSGHNHGPMCFV 644
Query: 245 DFEEVEQASIAMEGLQDSTLP----SSDRGGMHIEYARSKM 281
+FE+V A+ A+ L LP + +GG+ + ++++ +
Sbjct: 645 EFEDVAHATRALAELYGRALPRPNGGNGKGGIRLSFSKNPL 685
>gi|238605839|ref|XP_002396559.1| hypothetical protein MPER_03182 [Moniliophthora perniciosa FA553]
gi|215469352|gb|EEB97489.1| hypothetical protein MPER_03182 [Moniliophthora perniciosa FA553]
Length = 362
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 200 PCSTLFIANL----------GPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEV 249
P +TL++ NL P+ E+ L++ + PGF L + + P+ F +FE+V
Sbjct: 154 PINTLYVGNLPTSPPPMGYHSPDILEESLRELFRLRPGFRRLSFKQKNSGPMCFVEFEDV 213
Query: 250 EQASIAMEGLQDSTLPSSDRG-GMHIEYARSKM 281
AS M L +TL +G G+ + Y+R+ +
Sbjct: 214 SAASKTMNELSGNTLNGLVKGQGIRLSYSRNPL 246
>gi|414870052|tpg|DAA48609.1| TPA: hypothetical protein ZEAMMB73_404025 [Zea mays]
Length = 665
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 15 HPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGN 74
+PP PP+P + + T+F+ LP DV+ E+HNL GF+ ++ + +GN
Sbjct: 448 NPPSPPIPG--ASDIVAADEVCTIFMD-LPIDVKETEMHNLLCWLLGFEAFEMNF--KGN 502
Query: 75 QVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
Q + FA F A+ A FD ++ VL ++A+ N KR
Sbjct: 503 QPMGFALFSTVHQAITAKAMFQDTVFDTETKVVLQTDMAKKNLFVKR 549
>gi|357110599|ref|XP_003557104.1| PREDICTED: uncharacterized protein LOC100821534 [Brachypodium
distachyon]
Length = 261
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 14/101 (13%)
Query: 17 PPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTG 71
P PP+PP + NTLF+ G+P+D RE+ ++FR GF +L ++ G
Sbjct: 147 PEPPLPP---------DASNTLFIEGIPNDCERREVSHIFRPFVGFKEVRLVTKEPRHPG 197
Query: 72 RGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIEL 112
V+ F F N A A+ L G KFD + H+ L
Sbjct: 198 GDPIVLCFVDFTNAAQAAVAMEALQGYKFDEHDRTSPHLRL 238
>gi|451856476|gb|EMD69767.1| hypothetical protein COCSADRAFT_155918 [Cochliobolus sativus
ND90Pr]
Length = 244
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 106/251 (42%), Gaps = 35/251 (13%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRK-----PGFDFCQLKYTGRGNQVVAFATFVNHQTAV 89
I T++V+ L + V+ + R P D R Q AF F + + A+
Sbjct: 24 IETIYVNNLEERVKIDTMKQALTRVFQYYGPILDVIAKSSLKRKGQ--AFIVFDSEKAAL 81
Query: 90 AALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADG 149
A+ E+NG + G V+ + A+++S + K + KR + +++ A+
Sbjct: 82 EAVEEMNGFEM---YGKVMRVHRAKTHSDETVKRKAPDMFEDHKRKRL--TLKDFKRAEE 136
Query: 150 DSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANL 209
D+ +A+PV + RA +G A P + V+P TLF+ N+
Sbjct: 137 DAKA-QANPV------------AAEKPRAAKTGAAAVP-------DEYVRPNKTLFLQNI 176
Query: 210 GPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDR 269
+ ED+L + GF ++R VAFA+FE EQ +I + +T ++
Sbjct: 177 PRDVDEDDLTTIFERFEGFK--EVRLVSVRAVAFAEFEN-EQFAITAKEATANTPIGAEG 233
Query: 270 GGMHIEYARSK 280
M + Y R +
Sbjct: 234 KPMKVTYQRQQ 244
>gi|281205884|gb|EFA80073.1| hypothetical protein PPL_06895 [Polysphondylium pallidum PN500]
Length = 639
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 54/120 (45%), Gaps = 5/120 (4%)
Query: 1 MAHPPYDPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKP 60
MA PP P++ P P PP + + TLF S LP DV RE+ LFR
Sbjct: 520 MAAPPL-PHHHGAYPDPTMPYFIPPRQNFDMKDANTTLFFSNLPKDVTERELSILFRFMR 578
Query: 61 GFDFCQLKYTGR-GNQVVAFATFVNHQTAVAALHELNGVKFDPQ-SGSVLHIELARSNSR 118
G F ++ R G + F F +A A+ LNG K DP+ + S + E RS R
Sbjct: 579 G--FLNVRLVQRDGKYPICFCDFRGVPSAAIAMEMLNGFKMDPKDTSSSISNEFDRSRPR 636
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGG-MPVAFADFEEVEQASIAMEGLQ 260
+TLF +NL + TE EL GF +++ R G P+ F DF V A+IAME L
Sbjct: 554 TTLFFSNLPKDVTERELSILFRFMRGFLNVRLVQRDGKYPICFCDFRGVPSAAIAMEMLN 613
Query: 261 DSTL-PSSDRGGMHIEYARSKMRKL 284
+ P + E+ RS+ R L
Sbjct: 614 GFKMDPKDTSSSISNEFDRSRPRPL 638
>gi|224033783|gb|ACN35967.1| unknown [Zea mays]
Length = 331
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 21/117 (17%)
Query: 9 YYLPPIH-------PPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPG 61
+Y P IH P P +PP + NT++V GLP + RE+ ++FR+ G
Sbjct: 217 FYGPNIHNGVPYFGAPEPSLPP---------DATNTIYVEGLPINCTRREVAHIFRQYMG 267
Query: 62 FDFCQLKYTGRG-NQVVAFATFVNHQTAVAALHELNGVKFDPQS--GSVLHIELARS 115
F +++ +G N+ + F F A A+ L G KFD Q +L+++ +RS
Sbjct: 268 --FLEMRLVNKGSNKHLCFVDFATPAQAFFAMRNLQGYKFDEQDPHSRILNLQFSRS 322
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Query: 188 INSEKPYEGGVQP------CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMP- 240
I++ PY G +P +T+++ L NCT E+ Y GF +++ +G
Sbjct: 222 IHNGVPYFGAPEPSLPPDATNTIYVEGLPINCTRREVAHIFRQYMGFLEMRLVNKGSNKH 281
Query: 241 VAFADFEEVEQASIAMEGLQDSTLPSSDRGG--MHIEYARS 279
+ F DF QA AM LQ D ++++++RS
Sbjct: 282 LCFVDFATPAQAFFAMRNLQGYKFDEQDPHSRILNLQFSRS 322
>gi|326499832|dbj|BAJ90751.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326501246|dbj|BAJ98854.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 14/101 (13%)
Query: 17 PPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTG 71
P PP+PP + NTL++ GLP + RE+ ++FR GF +L ++ G
Sbjct: 174 PEPPLPP---------DASNTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPG 224
Query: 72 RGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIEL 112
V+ F F + A AL L G KFD H+ L
Sbjct: 225 GDPHVLCFVDFDSPAQATIALEALQGYKFDEHDRESAHLRL 265
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-----RARGGMP--VAFADFEEVEQASI 254
+TL+I L NCT E+ + GF +++ R GG P + F DF+ QA+I
Sbjct: 184 NTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDSPAQATI 243
Query: 255 AMEGLQDSTLPSSDRGGMHIEYARSKM 281
A+E LQ DR H+ S+
Sbjct: 244 ALEALQGYKFDEHDRESAHLRLQFSRF 270
>gi|170091552|ref|XP_001876998.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648491|gb|EDR12734.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1370
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
I+T+FV G P+D++ RE N+F PGF+ LK + + A+ V TA AAL
Sbjct: 594 ISTIFVVGFPEDMQEREFQNMFTFSPGFEAATLKIPNK--EYTAYGGLVGSGTATAALRS 651
Query: 95 LNG 97
G
Sbjct: 652 FQG 654
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 200 PCSTLFIANLGPNCT---------EDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVE 250
P +TL++ NL + T E+ L++ S PGF L R + P+ F +FE+V+
Sbjct: 1092 PINTLYVGNLPTSPTPIGFPQDYLEESLRELFSSCPGFRRLCFRQKNNGPMCFVEFEDVQ 1151
Query: 251 QASIAMEGLQDSTLPSSDR-GGMHIEYARSKM 281
A+ A+ L +TL + GG+ + Y+++ +
Sbjct: 1152 YAAKALNDLYGNTLKGLVKGGGIRLSYSKNPL 1183
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 75 QVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRK----PGSGAYVV 130
Q++ FA F + + A+ A L G + D + G+VL E+A+ N KR PGSGA V
Sbjct: 711 QIIGFAKFRSREEALGARDVLQGRRVDIEKGAVLKAEMAKKNLHTKRGVGPVPGSGASAV 770
Query: 131 IDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKG 168
T N + + T S S D+G
Sbjct: 771 GGSTTTVGNNSSNPTLQHINGTTLSGSGADPYTSGDEG 808
>gi|356514689|ref|XP_003526036.1| PREDICTED: uncharacterized protein LOC100809186 [Glycine max]
Length = 228
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
N LFV GLP+D RE+ +LFR G+ ++ + +G + F FV+ + A+
Sbjct: 121 NILFVGGLPNDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMTLCFVEFVDSKCALT 180
Query: 91 ALHELNGVKFDPQS--GSVLHIELA 113
A+ L G KFD + L IE A
Sbjct: 181 AMEALQGYKFDDKKPDSPTLKIEFA 205
>gi|449447147|ref|XP_004141330.1| PREDICTED: uncharacterized protein LOC101211987 [Cucumis sativus]
gi|449486681|ref|XP_004157367.1| PREDICTED: uncharacterized protein LOC101228687 [Cucumis sativus]
Length = 246
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
N LFV GLP D RE+ +LFR G+ ++ + TG V+ F FV + + A
Sbjct: 148 NVLFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRTGDKAMVLCFVEFVEAKFSQA 207
Query: 91 ALHELNGVKFDPQS--GSVLHIELA 113
A+ L G KFD + VL I+ A
Sbjct: 208 AMEALQGYKFDDKKPDSPVLKIQFA 232
>gi|293331463|ref|NP_001168957.1| uncharacterized protein LOC100382777 [Zea mays]
gi|223974013|gb|ACN31194.1| unknown [Zea mays]
Length = 287
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 14/101 (13%)
Query: 17 PPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTG 71
P PP+PP + +TL++ GLP + RE+ ++FR GF +L ++ G
Sbjct: 178 PEPPLPP---------DASSTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPG 228
Query: 72 RGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIEL 112
V+ F F N A AL L G KFD H+ L
Sbjct: 229 GDPHVLCFVDFDNPAQATIALEALQGYKFDEHERDSAHLRL 269
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-----RARGGMP--VAFADFEEVEQASI 254
STL+I L NCT E+ + GF +++ R GG P + F DF+ QA+I
Sbjct: 188 STLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDNPAQATI 247
Query: 255 AMEGLQDSTLPSSDRGGMHIEYARSKM 281
A+E LQ +R H+ S+
Sbjct: 248 ALEALQGYKFDEHERDSAHLRLQFSRF 274
>gi|443900067|dbj|GAC77394.1| casein kinase [Pseudozyma antarctica T-34]
Length = 1263
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 200 PCSTLFIANLGPNCT-------EDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQA 252
P +TLF+ NL N + ED+L+ S GF R + P+ F +FE+V A
Sbjct: 905 PVNTLFVGNLPSNASSAVLSQIEDQLRAVFSSCRGFRQFSFRLKSNGPMCFVEFEDVHTA 964
Query: 253 SIAMEGLQDSTLPSSDR-GGMHIEYARSKMRKL 284
S AM L +L + + GG+ + ++++ + ++
Sbjct: 965 SKAMSELNGHSLGGAIKNGGIRLSFSKNPLFRM 997
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 71 GRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKP 123
G+ Q++ FA F A+ A LNG K D + G VL E+A+ N K++P
Sbjct: 540 GKIKQIIGFAKFRTRADALEARDALNGRKVDAEKGCVLKTEMAKKNLHTKQRP 592
>gi|384247133|gb|EIE20621.1| hypothetical protein COCSUDRAFT_83539 [Coccomyxa subellipsoidea
C-169]
Length = 321
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-KYTGRGNQVV--AFATFVNHQTAVAALH 93
TLF+SGLP + RE+ ++ R GF +L + R N+ V FA F + Q A A++
Sbjct: 142 TLFLSGLPLKITKREVAHILRPCEGFKELRLVQKVDRNNKDVMWCFAEFSSKQLAARAMN 201
Query: 94 ELNG--VKFDPQSGSVLHIELARSNSRKKRKPGSGA 127
+L G V D Q L I AR+ + K + G A
Sbjct: 202 DLQGYAVDLDDQDSPTLRISYARALNNPKVREGRAA 237
>gi|357148760|ref|XP_003574884.1| PREDICTED: uncharacterized protein LOC100836479 [Brachypodium
distachyon]
Length = 296
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 14/101 (13%)
Query: 17 PPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTG 71
P PP+PP + NTL++ GLP + RE+ ++FR GF +L ++ G
Sbjct: 187 PEPPLPP---------DASNTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPG 237
Query: 72 RGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIEL 112
V+ F F + A AL L G KFD H+ L
Sbjct: 238 GDPHVLCFVDFDSPAQATIALEALQGYKFDEHDRESAHLRL 278
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-----RARGGMP--VAFADFEEVEQASI 254
+TL+I L NCT E+ + GF +++ R GG P + F DF+ QA+I
Sbjct: 197 NTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDSPAQATI 256
Query: 255 AMEGLQDSTLPSSDRGGMHIEYARSKM 281
A+E LQ DR H+ S+
Sbjct: 257 ALEALQGYKFDEHDRESAHLRLQFSRF 283
>gi|281211458|gb|EFA85620.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 355
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 201 CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-GGMPVAFADFEEVEQASIAMEGL 259
CSTLF++NL + TE EL GF +++ R G P+ F DF + A+ AME L
Sbjct: 270 CSTLFVSNLPKDVTERELSILFRFMRGFINVRLVQREGKYPICFCDFRDTLSAAGAMEML 329
Query: 260 QDSTLPSSD-RGGMHIEYARSKMRK 283
+ + D + IE+ +S+ +
Sbjct: 330 NGFKMDTKDISSSISIEFDKSRTHR 354
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 20/126 (15%)
Query: 1 MAH-PPYD-----PYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHN 54
M H PPY PY+LP P Y + + +TLFVS LP DV RE+
Sbjct: 242 MHHTPPYGETTGMPYFLPT---------RPSYDLK---DACSTLFVSNLPKDVTERELSI 289
Query: 55 LFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQS-GSVLHIELA 113
LFR GF +L G + F F + +A A+ LNG K D + S + IE
Sbjct: 290 LFRFMRGFINVRL-VQREGKYPICFCDFRDTLSAAGAMEMLNGFKMDTKDISSSISIEFD 348
Query: 114 RSNSRK 119
+S + +
Sbjct: 349 KSRTHR 354
>gi|116781538|gb|ABK22144.1| unknown [Picea sitchensis]
Length = 235
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 104/249 (41%), Gaps = 30/249 (12%)
Query: 36 NTLFVSGLPDDVRAREIH-NLFRRKPGF----DFCQLKYTGRGNQVVAFATFVNHQTAVA 90
T++V+ L + V+ E+ +L+ F D LK T Q A+ F A
Sbjct: 10 QTIYVNNLNERVKKEELKKSLYALFSQFGRIADIVALKTTKLRGQ--AWVVFDEITAASN 67
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGD 150
AL ++ G F + + I+ +S S K G YV +KR K QE +
Sbjct: 68 ALRQMQGFPFYDKP---MRIQYGKSKSDAIAKV-DGTYVPREKRKK-----QEEKAEKRR 118
Query: 151 SDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLG 210
+ E N + G +QS+ P + E P P + LFI NL
Sbjct: 119 KEQHETHQAGNGPATSYGAAAASQSQFQQGK-----PSSQEPP----APPNNILFIQNLP 169
Query: 211 PNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDR 269
T L+ YPGF ++M A+ G +AF ++ + QAS+AM+ LQ + + +
Sbjct: 170 HETTTMMLQMLFQQYPGFKEVRMIEAKPG--IAFVEYGDEMQASVAMQALQGFKI--TPQ 225
Query: 270 GGMHIEYAR 278
M I YA+
Sbjct: 226 NPMLITYAK 234
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 14/86 (16%)
Query: 19 PPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVA 78
PP PP N LF+ LP + + LF++ PGF ++ G +A
Sbjct: 155 PPAPPN-----------NILFIQNLPHETTTMMLQMLFQQYPGFKEVRMIEAKPG---IA 200
Query: 79 FATFVNHQTAVAALHELNGVKFDPQS 104
F + + A A+ L G K PQ+
Sbjct: 201 FVEYGDEMQASVAMQALQGFKITPQN 226
>gi|146421882|ref|XP_001486884.1| hypothetical protein PGUG_00261 [Meyerozyma guilliermondii ATCC
6260]
Length = 589
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 17/99 (17%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM-------------PVAFADF 246
PC+TL++ NL P+ TE EL+ GF L R + P+ F +F
Sbjct: 454 PCNTLYVGNLPPDATEAELRALFLPQKGFRRLSFRTKNQSSAGPSSATSHNHGPMCFVEF 513
Query: 247 EEVEQASIAMEGLQDSTLP----SSDRGGMHIEYARSKM 281
E+V A+ A+ L LP S+ +GG+ + ++++ +
Sbjct: 514 EDVAHATRALAELYGRALPRPNGSNGKGGIRLSFSKNPL 552
>gi|149057909|gb|EDM09152.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_c [Rattus norvegicus]
gi|149057914|gb|EDM09157.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_c [Rattus norvegicus]
gi|149057919|gb|EDM09162.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_c [Rattus norvegicus]
Length = 107
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVN 84
P Q+ + TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F +
Sbjct: 13 PSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDS 70
Query: 85 HQTAVAALHELN 96
A AA + LN
Sbjct: 71 RSEAEAAKNALN 82
>gi|395746852|ref|XP_003780695.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein with multiple
splicing 2 [Pongo abelii]
Length = 232
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 23/84 (27%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T R
Sbjct: 71 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR---------------------- 108
Query: 95 LNGVKFDPQSGSVLHIELARSNSR 118
G++FDP++ L +E A++N++
Sbjct: 109 -QGIRFDPENPQRLRLEFAKANTK 131
>gi|293334753|ref|NP_001168219.1| hypothetical protein [Zea mays]
gi|223946801|gb|ACN27484.1| unknown [Zea mays]
gi|414591373|tpg|DAA41944.1| TPA: hypothetical protein ZEAMMB73_165038 [Zea mays]
Length = 441
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 33 NGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRG-NQVVAFATFVNHQTAVAA 91
+ NT++V GLP + RE+ ++FR+ G F +++ +G N+ + F F A A
Sbjct: 349 DATNTIYVEGLPINCTRREVAHIFRQYMG--FLEMRLVNKGSNKHLCFVDFATPAQAFFA 406
Query: 92 LHELNGVKFDPQS--GSVLHIELARS 115
+ L G KFD Q +L+++ +RS
Sbjct: 407 MRNLQGYKFDEQDPHSRILNLQFSRS 432
Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Query: 188 INSEKPYEGGVQP------CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMP- 240
I++ PY G +P +T+++ L NCT E+ Y GF +++ +G
Sbjct: 332 IHNGVPYFGAPEPSLPPDATNTIYVEGLPINCTRREVAHIFRQYMGFLEMRLVNKGSNKH 391
Query: 241 VAFADFEEVEQASIAMEGLQDSTLPSSDRGG--MHIEYARS 279
+ F DF QA AM LQ D ++++++RS
Sbjct: 392 LCFVDFATPAQAFFAMRNLQGYKFDEQDPHSRILNLQFSRS 432
>gi|166240105|ref|XP_646953.2| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|165988745|gb|EAL73083.2| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 356
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
PCSTLF++NL + TE EL GF +++ G +P+ F DF + + + A+E
Sbjct: 270 PCSTLFVSNLPKDVTERELSILFRFMRGFVGIRLINKEGKLPMCFCDFIDTQSSMFALEF 329
Query: 259 LQ 260
LQ
Sbjct: 330 LQ 331
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
+TLFVS LP DV RE+ LFR GF +L G + F F++ Q+++ AL L
Sbjct: 272 STLFVSNLPKDVTERELSILFRFMRGFVGIRL-INKEGKLPMCFCDFIDTQSSMFALEFL 330
Query: 96 NGVKFD 101
G + D
Sbjct: 331 QGFRMD 336
>gi|218197575|gb|EEC80002.1| hypothetical protein OsI_21654 [Oryza sativa Indica Group]
Length = 232
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNH 85
+++ N LFV GLP D RE+ +LFR GF +L +++ V+ F F +
Sbjct: 123 REDESNILFVDGLPTDCTRREVAHLFRPFVGFKDIRLVHKEPRHSSDRAYVLCFVEFSDA 182
Query: 86 QTAVAALHELNGVKFDPQS--GSVLHIELAR 114
+ A+ A+ L +FD + +VL+I+ AR
Sbjct: 183 KCAITAMEALQEYRFDERKPDAAVLNIKFAR 213
>gi|169589|gb|AAA33847.1| spliceosomal protein [Solanum tuberosum]
Length = 231
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 103/252 (40%), Gaps = 43/252 (17%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFAT-------FVNHQTAV 89
T+++ L + V+ E+ +C GR +VA T +V
Sbjct: 12 TIYIKNLNEKVKKEELKRSL-------YCLFSQYGRIVDIVALKTPKLRGQSWVVFSEVT 64
Query: 90 AALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADG 149
AA + + ++ P + I+ A+S S K G Y DK+ K + V++ +
Sbjct: 65 AASNAVRQMQNFPFYDKPMRIQYAKSKSDCIAK-AEGTY---DKKKKQDEKVEKRKRTEE 120
Query: 150 DSDTDEASPVRNIDSADKGDFVTTQSERATDS-GNAVAPINSEKPYEGGV-QPCSTLFIA 207
T A+ R TDS G A KP V +P + LFI
Sbjct: 121 TPQTGAANGPR------------------TDSNGGPAAASRQGKPSAQDVAEPNNILFIQ 162
Query: 208 NLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEGLQDSTLPS 266
NL T L+ YPGF ++M A+ G +AF +F++ Q+S+AM+ LQ +
Sbjct: 163 NLPHETTSMMLEVLFKQYPGFREVRMIEAKPG--IAFVEFDDDVQSSVAMQALQGFKI-- 218
Query: 267 SDRGGMHIEYAR 278
+ + M I YA+
Sbjct: 219 TPQNPMAITYAK 230
>gi|393246120|gb|EJD53629.1| hypothetical protein AURDEDRAFT_110433 [Auricularia delicata
TFB-10046 SS5]
Length = 734
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 200 PCSTLFIANLGP--------NCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQ 251
P +TL++ NL N E+ L+ PGF L R + P+ F +FE+V+
Sbjct: 480 PINTLYVGNLPTSPPPGYPPNQLEESLRMLFQRCPGFRKLCFRQKSNGPMCFVEFEDVQY 539
Query: 252 ASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
AS AM+ L TL + G+ + Y+++ +
Sbjct: 540 ASRAMQDLYGDTLNGLVKNGIRLSYSKNPL 569
>gi|241686636|ref|XP_002412834.1| hypothetical protein IscW_ISCW022577 [Ixodes scapularis]
gi|215506636|gb|EEC16130.1| hypothetical protein IscW_ISCW022577 [Ixodes scapularis]
Length = 144
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT---GRGNQVVAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T G+ + V F TF + A AA
Sbjct: 75 VRTLFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTQKNGKTSSPVGFVTFSSRAGAEAA 134
Query: 92 LHELN 96
EL
Sbjct: 135 KQELQ 139
>gi|68469094|ref|XP_721334.1| hypothetical protein CaO19.6494 [Candida albicans SC5314]
gi|68470119|ref|XP_720821.1| hypothetical protein CaO19.13847 [Candida albicans SC5314]
gi|77022790|ref|XP_888839.1| hypothetical protein CaO19_6494 [Candida albicans SC5314]
gi|46442709|gb|EAL01996.1| hypothetical protein CaO19.13847 [Candida albicans SC5314]
gi|46443247|gb|EAL02530.1| hypothetical protein CaO19.6494 [Candida albicans SC5314]
gi|76573652|dbj|BAE44736.1| hypothetical protein [Candida albicans]
Length = 704
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 25/107 (23%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARG---------------------G 238
PC+TL++ NL P+ TE EL+ S GF L R +
Sbjct: 544 PCNTLYVGNLPPDATESELRTLFSPQKGFRRLSFRTKNQSSSNNGTGSGGGSGGGGGHSH 603
Query: 239 MPVAFADFEEVEQASIAMEGLQDSTLP----SSDRGGMHIEYARSKM 281
P+ F +FE+V A+ A+ L LP + +GG+ + ++++ +
Sbjct: 604 GPMCFVEFEDVAHATRALAELYGRALPRPNGGNGKGGIRLSFSKNPL 650
>gi|238883377|gb|EEQ47015.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 708
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 25/107 (23%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARG---------------------G 238
PC+TL++ NL P+ TE EL+ S GF L R +
Sbjct: 548 PCNTLYVGNLPPDATESELRTLFSPQKGFRRLSFRTKNQSSSNNGTGSGGGSGGGGGHSH 607
Query: 239 MPVAFADFEEVEQASIAMEGLQDSTLP----SSDRGGMHIEYARSKM 281
P+ F +FE+V A+ A+ L LP + +GG+ + ++++ +
Sbjct: 608 GPMCFVEFEDVAHATRALAELYGRALPRPNGGNGKGGIRLSFSKNPL 654
>gi|145491995|ref|XP_001431996.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399103|emb|CAK64598.1| unnamed protein product [Paramecium tetraurelia]
Length = 124
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 29 QQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL--KYTGRGNQ-VVAFATFVNH 85
Q Q ++L+V G+P+D + RE+ ++FR PGF +L K T +G + ++ F F +
Sbjct: 26 QPQKESTHSLYVDGIPNDAQEREVAHIFRPYPGFQRVRLIKKQTQKGREYLLCFVDFDDA 85
Query: 86 QTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A + L G +FD + L I A + ++K+
Sbjct: 86 LQATIVMQTLQGYRFDKNDKTGLKIYFANNPKQEKQ 121
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 188 INSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFN---MLKMRARGGMP--VA 242
I + ++ + +L++ + + E E+ YPGF ++K + + G +
Sbjct: 19 IRDNQQFQPQKESTHSLYVDGIPNDAQEREVAHIFRPYPGFQRVRLIKKQTQKGREYLLC 78
Query: 243 FADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARS 279
F DF++ QA+I M+ LQ +D+ G+ I +A +
Sbjct: 79 FVDFDDALQATIVMQTLQGYRFDKNDKTGLKIYFANN 115
>gi|403346976|gb|EJY72898.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 310
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFA--TFVNHQTAVAALHE 94
TLFV GLP + R +I + FR+ +L Y + Q FA TF NHQ+A AL E
Sbjct: 184 TLFVKGLPYEFREDDIGDRFRKFGEIKSIRLSYNWQTKQFKGFAYLTFGNHQSAKKALLE 243
Query: 95 LNG 97
+NG
Sbjct: 244 MNG 246
>gi|357110782|ref|XP_003557195.1| PREDICTED: uncharacterized protein LOC100823400 [Brachypodium
distachyon]
Length = 209
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
N LFV GLP D + RE+ +LFR GF +L + +G V+ F F + + A
Sbjct: 106 NILFVDGLPTDCKRREVAHLFRPFVGFKDLRLVHKEPRRSGDKAYVLCFVEFNDAKCAFT 165
Query: 91 ALHELNGVKFDPQS--GSVLHIELAR 114
A+ L +FD + VL I+ AR
Sbjct: 166 AMQALQEYRFDERKPDAPVLKIQFAR 191
>gi|414591374|tpg|DAA41945.1| TPA: hypothetical protein ZEAMMB73_165038 [Zea mays]
Length = 469
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 33 NGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRG-NQVVAFATFVNHQTAVAA 91
+ NT++V GLP + RE+ ++FR+ G F +++ +G N+ + F F A A
Sbjct: 349 DATNTIYVEGLPINCTRREVAHIFRQYMG--FLEMRLVNKGSNKHLCFVDFATPAQAFFA 406
Query: 92 LHELNGVKFDPQS--GSVLHIELARS 115
+ L G KFD Q +L+++ +RS
Sbjct: 407 MRNLQGYKFDEQDPHSRILNLQFSRS 432
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Query: 188 INSEKPYEGGVQP------CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMP- 240
I++ PY G +P +T+++ L NCT E+ Y GF +++ +G
Sbjct: 332 IHNGVPYFGAPEPSLPPDATNTIYVEGLPINCTRREVAHIFRQYMGFLEMRLVNKGSNKH 391
Query: 241 VAFADFEEVEQASIAMEGLQDSTLPSSDRGG--MHIEYARS 279
+ F DF QA AM LQ D ++++++RS
Sbjct: 392 LCFVDFATPAQAFFAMRNLQGYKFDEQDPHSRILNLQFSRS 432
>gi|149234798|ref|XP_001523278.1| hypothetical protein LELG_05504 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146453067|gb|EDK47323.1| hypothetical protein LELG_05504 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 817
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 26/108 (24%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-------------GGM------- 239
PC+TL++ NL P+ TE EL+ + GF L R + GG
Sbjct: 638 PCNTLYVGNLPPDATETELRTLFAPQKGFRRLSFRTKNATPSSSTGTNGNGGASTTSSHN 697
Query: 240 --PVAFADFEEVEQASIAMEGLQDSTLPS----SDRGGMHIEYARSKM 281
P+ F +FE+V A+ A+ L + LP + +GG+ + ++++ +
Sbjct: 698 HGPMCFVEFEDVAHATRALAELYGAALPRPQGLNAKGGIRLSFSKNPL 745
>gi|222634881|gb|EEE65013.1| hypothetical protein OsJ_19964 [Oryza sativa Japonica Group]
Length = 265
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 14/101 (13%)
Query: 17 PPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTG 71
P PP+PP + NTLF+ G+P D RE+ ++FR GF +L ++ G
Sbjct: 153 PEPPLPP---------DASNTLFIEGIPTDCARREVSHIFRPFVGFREVRLVSKEARHPG 203
Query: 72 RGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIEL 112
++ F F A A+ L G KFD + H+ L
Sbjct: 204 GDPILLCFVDFETASQAAIAMDALQGYKFDEHDRNSPHLRL 244
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-----RARGGMPV--AFADFEEVEQASI 254
+TLFI + +C E+ + GF +++ R GG P+ F DFE QA+I
Sbjct: 163 NTLFIEGIPTDCARREVSHIFRPFVGFREVRLVSKEARHPGGDPILLCFVDFETASQAAI 222
Query: 255 AMEGLQDSTLPSSDRGGMH--IEYAR 278
AM+ LQ DR H +++AR
Sbjct: 223 AMDALQGYKFDEHDRNSPHLRLQFAR 248
>gi|217072842|gb|ACJ84781.1| unknown [Medicago truncatula]
Length = 245
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 114/261 (43%), Gaps = 50/261 (19%)
Query: 37 TLFVSGLPDDVRAREI----HNLFRR----KPGFDFCQLKYTGRGNQVVAFATFVNHQTA 88
T++++ L + ++ E+ H +F + F LK+ G+ A+ F + +A
Sbjct: 15 TIYINNLNEKIKIDELKKSLHAVFSQFGKILEVLAFKTLKHKGQ-----AWVIFEDVTSA 69
Query: 89 VAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSAD 148
AL ++ G F + + I+ AR+ S K G +V +KR + +
Sbjct: 70 SNALRQMQGFPFYDKP---MRIQYARTKSDVIAK-AEGTFVPREKRKRHD---------- 115
Query: 149 GDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQ--------- 199
D+A R D D + T A P S+ PY GG +
Sbjct: 116 -----DKAGKKRK-DQND-ANLAGTGLNPAYAGAYGATPALSQIPYPGGAKSLLPEAPAP 168
Query: 200 PCSTLFIANLGPNCTEDELKQTLSV-YPGFNMLKM-RARGGMPVAFADFEEVEQASIAME 257
P + LFI NL PN T + Q L + YPGF ++M A+ G +AF ++ + Q+++AM+
Sbjct: 169 PNNILFIQNL-PNETTPMMLQMLFLQYPGFKEVRMVEAKPG--IAFVEYGDEMQSTMAMQ 225
Query: 258 GLQDSTLPSSDRGGMHIEYAR 278
LQ + + + M I YA+
Sbjct: 226 ALQGFKI--APQNPMLITYAK 244
>gi|145499741|ref|XP_001435855.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402991|emb|CAK68458.1| unnamed protein product [Paramecium tetraurelia]
Length = 124
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 29 QQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL--KYTGRGNQ-VVAFATFVNH 85
Q Q + ++L+V G+P+D + RE+ ++FR PGF +L K T +G + ++ F F +
Sbjct: 26 QPQKDSTHSLYVDGIPNDAQEREVAHIFRPYPGFQRVRLIKKQTQKGREYLLCFVDFDDA 85
Query: 86 QTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
A + L G +FD + L I A + ++K+
Sbjct: 86 FQATIVMQTLQGYRFDKNDKTGLKIYFANNPKQEKQ 121
>gi|312382238|gb|EFR27763.1| hypothetical protein AND_05166 [Anopheles darlingi]
Length = 738
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Query: 14 IHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRG 73
+ P P P H + + + +SG+P + +I L + + C+ +
Sbjct: 140 VRNPELPTPTSSVPHSRFETTTAKIVMSGIPQHAKFDDIEPLLKPYGKVEHCEAGTSKDP 199
Query: 74 NQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKP 123
N TF NH A A+ LNG++FD GS L +EL+ N + +R P
Sbjct: 200 NTQTVHITFQNHDQAQRAVSSLNGIEFD---GSKLLVELSEVNKQARRTP 246
>gi|448537570|ref|XP_003871360.1| Whi3 RNA binding protein [Candida orthopsilosis Co 90-125]
gi|380355717|emb|CCG25235.1| Whi3 RNA binding protein [Candida orthopsilosis]
Length = 770
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 28/110 (25%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM-------------------- 239
PC+TL++ NL P+ TE EL+ + GF L R +
Sbjct: 589 PCNTLYVGNLPPDATEAELRTLFAPQKGFRRLSFRTKNQTNNSTGGSTSTTSTATNSSGH 648
Query: 240 ---PVAFADFEEVEQASIAMEGLQDSTLP-----SSDRGGMHIEYARSKM 281
P+ F +FE+V A+ A+ L TLP ++ +GG+ + ++++ +
Sbjct: 649 NHGPMCFVEFEDVAHATRALAELYGRTLPRPHAGNNGKGGIRLSFSKNPL 698
>gi|363807398|ref|NP_001242381.1| uncharacterized protein LOC100816255 [Glycine max]
gi|255647054|gb|ACU23995.1| unknown [Glycine max]
Length = 220
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
N LFV GLP D RE+ +LFR G+ ++ + +G + F FV+ A+
Sbjct: 120 NILFVGGLPKDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMTLCFVEFVDSNCALT 179
Query: 91 ALHELNGVKFD 101
AL L G KFD
Sbjct: 180 ALETLQGYKFD 190
>gi|388857086|emb|CCF49301.1| related to WHI3-involved in regulation of cell size [Ustilago
hordei]
Length = 1030
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 200 PCSTLFIANLGPNCT-------EDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQA 252
P +TLF+ NL N + ED+L+ S GF R + P+ F +FE+V A
Sbjct: 880 PVNTLFVGNLPSNASSAVLSQIEDQLRAVFSSCQGFRQFSFRLKSNGPMCFVEFEDVYTA 939
Query: 253 SIAMEGLQDSTLPSSDR-GGMHIEYARSKMRKL 284
S AM L +L + + GG+ + ++++ + ++
Sbjct: 940 SKAMSELNGHSLGGAIKNGGIRLSFSKNPLFRM 972
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 75 QVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKP 123
Q++ FA F A+ A LNG K D + G VL E+A+ N K++P
Sbjct: 499 QIIGFAKFRTRTEALEARDALNGRKVDAEKGCVLKTEMAKKNLHTKQRP 547
>gi|242081967|ref|XP_002445752.1| hypothetical protein SORBIDRAFT_07g025090 [Sorghum bicolor]
gi|241942102|gb|EES15247.1| hypothetical protein SORBIDRAFT_07g025090 [Sorghum bicolor]
Length = 203
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKM-----RARGGMP--VAFADFEEVEQASIA 255
TL+I L NCT E+ + GF +++ R GG P + F DF+ QA+IA
Sbjct: 105 TLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDNPAQATIA 164
Query: 256 MEGLQDSTLPSSDRGGMHIEYARSKM 281
+E LQ DR H+ S+
Sbjct: 165 LEALQGYKFDEHDRDSAHLRLQFSRF 190
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 17 PPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTG 71
P PP+PP + TL++ GLP + RE+ ++FR GF +L ++ G
Sbjct: 94 PEPPLPP---------DASPTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPG 144
Query: 72 RGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIEL 112
V+ F F N A AL L G KFD H+ L
Sbjct: 145 GDPHVLCFVDFDNPAQATIALEALQGYKFDEHDRDSAHLRL 185
>gi|403218363|emb|CCK72854.1| hypothetical protein KNAG_0L02390 [Kazachstania naganishii CBS
8797]
Length = 608
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 17/99 (17%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARG--------------GMPVAFAD 245
PC+TL++ NL + TE EL+Q GF L + + P+ F +
Sbjct: 495 PCNTLYVGNLPSDATEQELRQLFGGQQGFRRLSFKNKNPTNVHGHGHSHGHGHGPMCFVE 554
Query: 246 FEEVEQASIAMEGLQDSTLPSS---DRGGMHIEYARSKM 281
FE++ A+ A+ L S LP + +GG+ + ++++ +
Sbjct: 555 FEDISFATRALADLYGSQLPRTTVYSKGGIRLSFSKNPL 593
>gi|168024982|ref|XP_001765014.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683823|gb|EDQ70230.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 158
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
+TLFV GLP D RE ++FR GF +L K G V+ F F + + A
Sbjct: 68 STLFVDGLPQDCSRREAAHIFRPFIGFKEVRLVHKDAKRADGGKVVLCFVEFADARCAAT 127
Query: 91 ALHELNGVKFDP--QSGSVLHIELAR 114
AL L G KFD VL + AR
Sbjct: 128 ALEALQGYKFDETDHESYVLRLTFAR 153
>gi|405124332|gb|AFR99094.1| cell wall integrity protein scw1 [Cryptococcus neoformans var.
grubii H99]
Length = 953
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 200 PCSTLFIANLG--------PNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQ 251
P +TL++ NL P E+ L+ S PGF + R + P+ F +FEEV
Sbjct: 600 PINTLYVGNLPAVSPPTHPPGFLEESLRALFSRCPGFKRMSYRQKINGPMCFVEFEEVLY 659
Query: 252 ASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
AS A++ L L +GG+ + Y+++ +
Sbjct: 660 ASQAIKELYGHNLGGLVKGGIRLSYSKNSL 689
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
I+T+FV G PDD+ RE N+F PGF+ LK+ G++ A + T +AA
Sbjct: 194 ISTIFVVGFPDDMSEREFQNIFTFAPGFEAATLKFP-SGSRREPTAALLAELTQLAAHQN 252
Query: 95 LNGVKFD 101
G ++
Sbjct: 253 AQGGEYS 259
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 75 QVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
Q + FA F A+AA L G K DP +GSVL E+A+ N K+
Sbjct: 320 QTIGFARFKTRSDALAAKDHLQGKKIDPLTGSVLKAEMAKKNLHTKK 366
>gi|392883960|gb|AFM90812.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
Length = 226
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 98/247 (39%), Gaps = 34/247 (13%)
Query: 37 TLFVSGLPDDVRA----REIHNLFRRKPGF-DFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
T++++ + D ++ R +++LF + D LK Q AF F +A +
Sbjct: 8 TIYINNINDKIKKDELKRALYSLFSQFGQIVDIVALKTMKMRGQ--AFVIFKELCSATSG 65
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDS 151
L +L G F G + I+ A+++S K K+ K A QE S+A+
Sbjct: 66 LRQLQGFPF---YGKPMRIQYAKTDSDVTSKMRGTFADKEKKKEKKRAKAQEQSAANKKM 122
Query: 152 DTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGP 211
+ A P T S + T S N P N P LF+ NL
Sbjct: 123 NLGAAQPT------------TANSNQTTSSANQQVPDNP---------PNYILFLTNLPE 161
Query: 212 NCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGG 271
E L + +PGF +++ G +AF +FE QA A + LQ + S
Sbjct: 162 ETNEMMLSMLFNQFPGFKEVRL-VPGRHDIAFVEFENEGQAGAARDALQGFRITPSH--A 218
Query: 272 MHIEYAR 278
M I YA+
Sbjct: 219 MKITYAK 225
>gi|344299824|gb|EGW30177.1| hypothetical protein SPAPADRAFT_73559 [Spathaspora passalidarum
NRRL Y-27907]
Length = 710
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 14/80 (17%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR--------------GGMPVAFAD 245
PC+TL++ NL P+ TE EL+ S GF L R + P+ F +
Sbjct: 564 PCNTLYVGNLPPDATEAELRTLFSPQKGFRRLSFRTKTQSSTGGSSSSGSHSHGPMCFVE 623
Query: 246 FEEVEQASIAMEGLQDSTLP 265
FE + A+ A+ L S LP
Sbjct: 624 FESIAHATRALADLYGSALP 643
>gi|452003034|gb|EMD95491.1| hypothetical protein COCHEDRAFT_1200551 [Cochliobolus
heterostrophus C5]
Length = 244
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 41/254 (16%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRK-----PGFDFCQLKYTGRGNQVVAFATFVNHQTAV 89
I T++V+ L + V+ + R P D R Q AF F + + A+
Sbjct: 24 IETIYVNNLEERVKIDTMKQALIRVFQYYGPILDVIAKSSLKRKGQ--AFIVFDSEKAAL 81
Query: 90 AALHELNGVKFDPQSGSVLHIELARSNSR---KKRKPGSGAYVVIDKRTKTEANVQESSS 146
A+ ++NG + G V+ + A+++S K++ P + + + +++
Sbjct: 82 EAVEDMNGFEM---YGKVMRVHRAKTHSDETVKRKAPD-----MFEDHKRKRLTLKDFKR 133
Query: 147 ADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFI 206
A+ D+ +A+PV + RA +G A P + V+P TLF+
Sbjct: 134 AEEDAKA-QANPV------------AAEKPRAAKTGAAAVP-------DEYVRPNKTLFL 173
Query: 207 ANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPS 266
N+ + ED+L + GF ++R VAFA+FE EQ +I + +T
Sbjct: 174 QNIPRDVDEDDLTSIFERFEGFK--EVRLVSVRAVAFAEFEN-EQFAITAKEATANTPIG 230
Query: 267 SDRGGMHIEYARSK 280
++ M + Y R +
Sbjct: 231 AEGKPMKVTYQRQQ 244
>gi|116781833|gb|ABK22259.1| unknown [Picea sitchensis]
Length = 274
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
NTLFV GLP D RE ++FR GF +L + G V+ F F + + A
Sbjct: 158 NTLFVEGLPADCTRREAAHIFRPFIGFKEVRLVQKEPRRPGGDPLVLCFVDFTDARCAAT 217
Query: 91 ALHELNGVKFDP--QSGSVLHIELAR 114
AL L G KFD + + L ++ AR
Sbjct: 218 ALEALQGYKFDETDRESTGLRLQFAR 243
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-----RARGGMPV--AFADFEEVEQASI 254
+TLF+ L +CT E + GF +++ R GG P+ F DF + A+
Sbjct: 158 NTLFVEGLPADCTRREAAHIFRPFIGFKEVRLVQKEPRRPGGDPLVLCFVDFTDARCAAT 217
Query: 255 AMEGLQDSTLPSSDR--GGMHIEYAR 278
A+E LQ +DR G+ +++AR
Sbjct: 218 ALEALQGYKFDETDRESTGLRLQFAR 243
>gi|330933232|ref|XP_003304096.1| hypothetical protein PTT_16533 [Pyrenophora teres f. teres 0-1]
gi|311319509|gb|EFQ87793.1| hypothetical protein PTT_16533 [Pyrenophora teres f. teres 0-1]
Length = 244
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 106/254 (41%), Gaps = 41/254 (16%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRK-----PGFDFCQLKYTGRGNQVVAFATFVNHQTAV 89
I T++V+ L + V+ + R P D R Q AF F + + A+
Sbjct: 24 IETIYVNNLEERVKIDTMKQALTRVFQYYGPILDVIAKSSLKRKGQ--AFIVFDSEKAAL 81
Query: 90 AALHELNGVKFDPQSGSVLHIELARSNSR---KKRKPGSGAYVVIDKRTKTEANVQESSS 146
A+ E+NG + G V+ + A+++S K++ P + + + +++
Sbjct: 82 EAVEEMNGFEM---YGKVMKVHRAKTHSDETVKRKAPD-----MFEDHKRKRLTLKDFKR 133
Query: 147 ADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFI 206
A+ D+ +A+PV + RA +G A P + V+P TLF+
Sbjct: 134 AEEDAKA-QANPV------------AAEKPRAAKTGAAAIP-------DEYVRPNKTLFL 173
Query: 207 ANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPS 266
N+ + ED L + GF ++R VAFA+FE + A A E ++ + +
Sbjct: 174 QNIPRDVDEDTLTTIFERFEGFK--EVRLVSVRAVAFAEFENEQFAITAKEATANNPIGA 231
Query: 267 SDRGGMHIEYARSK 280
+ M + Y R +
Sbjct: 232 EGK-PMKVTYQRQQ 244
>gi|21744277|gb|AAM76197.1| RE30936p [Drosophila melanogaster]
Length = 238
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 240 PVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
PVAF +F++ AS AM+ LQ L SSDRG + IE+ARSKM
Sbjct: 32 PVAFIEFKDPPTASQAMQQLQGKYLLSSDRGSIRIEFARSKM 73
>gi|388497184|gb|AFK36658.1| unknown [Medicago truncatula]
Length = 232
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 114/261 (43%), Gaps = 50/261 (19%)
Query: 37 TLFVSGLPDDVRAREI----HNLF----RRKPGFDFCQLKYTGRGNQVVAFATFVNHQTA 88
T++++ L + ++ E+ H +F + F LK+ G+ A+ F + +A
Sbjct: 2 TIYINNLNEKIKIDELKKSLHAVFSQFGKILEVLAFKTLKHKGQ-----AWVIFEDVTSA 56
Query: 89 VAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSAD 148
AL ++ G F + + I+ AR+ S K G +V +KR + +
Sbjct: 57 SNALRQMQGFPFYDKP---MRIQYARTKSDVIAK-AEGTFVPREKRKRHD---------- 102
Query: 149 GDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQ--------- 199
D+A R D D + T A P S+ PY GG +
Sbjct: 103 -----DKAGKKRK-DQND-ANLAGTGLNPAYAGAYGATPALSQIPYPGGAKSLLPEAPAP 155
Query: 200 PCSTLFIANLGPNCTEDELKQTLSV-YPGFNMLKM-RARGGMPVAFADFEEVEQASIAME 257
P + LFI NL PN T + Q L + YPGF ++M A+ G +AF ++ + Q+++AM+
Sbjct: 156 PNNILFIQNL-PNETTPMMLQMLFLQYPGFKEVRMVEAKPG--IAFVEYGDEMQSTMAMQ 212
Query: 258 GLQDSTLPSSDRGGMHIEYAR 278
LQ + + + M I YA+
Sbjct: 213 ALQGFKI--APQNPMLITYAK 231
>gi|21593001|gb|AAM64950.1| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
Length = 232
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 102/251 (40%), Gaps = 37/251 (14%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFAT-------FVNHQTA 88
+++++ L + ++ E+ +C GR VVA T +V
Sbjct: 10 HSIYIQNLNERIKKEELKRSL-------YCLFSQFGRILDVVALKTPKLRGQAWVTFSEV 62
Query: 89 VAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSAD 148
AA H + ++ P + ++ A++ S K G +V DK+ K E V+
Sbjct: 63 TAAGHAVRQMQNFPXYDKPMRLQYAKAKSDCLAK-AEGTFVPKDKKRKQEEKVERKREES 121
Query: 149 GDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIAN 208
+T P N SA+ G + SG P P + LFI N
Sbjct: 122 QRPNTANG-PSANGPSANNG----VPAPSFQPSGQETMP------------PNNILFIQN 164
Query: 209 LGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEGLQDSTLPSS 267
L T L+ YPGF ++M A+ G +AF ++E+ QASIAM+ LQ + +
Sbjct: 165 LPHETTSMMLQLLFEQYPGFKEIRMIDAKPG--IAFVEYEDDVQASIAMQPLQGFKI--T 220
Query: 268 DRGGMHIEYAR 278
+ M I +A+
Sbjct: 221 PQNPMVISFAK 231
>gi|321264828|ref|XP_003197131.1| cell wall integrity protein scw1 [Cryptococcus gattii WM276]
gi|317463609|gb|ADV25344.1| cell wall integrity protein scw1, putative [Cryptococcus gattii
WM276]
Length = 963
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 200 PCSTLFIANLG--------PNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQ 251
P +TL++ NL P E+ L+ S PGF + R + P+ F +FEEV
Sbjct: 602 PINTLYVGNLPAVSPPTHPPGFLEESLRALFSRCPGFKRMSYRQKINGPMCFVEFEEVLY 661
Query: 252 ASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
AS A++ L L +GG+ + Y+++ +
Sbjct: 662 ASQAIKELYGHNLGGLVKGGIRLSYSKNSL 691
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
I+T+FV G PDD+ RE N+F PGF+ LK+ G++ A + T +AA
Sbjct: 194 ISTIFVVGFPDDMSEREFQNIFTFAPGFEAATLKFP-SGSRREPAAALLAELTQLAAQQN 252
Query: 95 LNGVKFD 101
G +
Sbjct: 253 AQGGDYS 259
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 75 QVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
Q + FA F A+AA L G K DP +GSVL E+A+ N K+
Sbjct: 320 QTIGFARFKTRNDALAAKDHLQGKKIDPLTGSVLKAEMAKKNLHTKK 366
>gi|452823467|gb|EME30477.1| U2 small nuclear ribonucleoprotein B'' [Galdieria sulphuraria]
Length = 250
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 106/249 (42%), Gaps = 45/249 (18%)
Query: 36 NTLFVSGLPDDVRAREI-HNLFRRKPGF----DFCQLKYTGRGNQVVAFATFVNHQTAVA 90
T+++ L + V+ +E+ +L+ F D LK T Q AF F + +A
Sbjct: 40 QTIYIRNLDEKVKKQELRQSLYEAFSQFGRIVDVVALKTTRMRGQ--AFIAFEDIASATN 97
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRT-KTEANVQESSSADG 149
AL L G F + + I+ A++ S K K G +V +R +A+V+ S +
Sbjct: 98 ALRGLQGFLFYNKP---MVIQYAKAKSEKVAKL-DGTFVRRSERKPDQDASVEPKSDSLK 153
Query: 150 DSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANL 209
T +++D+ G+ P LFIA +
Sbjct: 154 RKRTSTPVLSKDLDTLQVGE------------------------------PNHVLFIAGI 183
Query: 210 GPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDR 269
+C+ +L+ +PG+ ++ A G VAF +FE +QA++A++G+Q + S+
Sbjct: 184 PQDCSLQQLESLFVQFPGYKETRLAA-GQERVAFVEFETEDQATVALQGMQGFRI--SET 240
Query: 270 GGMHIEYAR 278
+ I YA+
Sbjct: 241 SQLSIVYAK 249
>gi|58270628|ref|XP_572470.1| cell wall integrity protein scw1 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134118120|ref|XP_772441.1| hypothetical protein CNBL3070 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255054|gb|EAL17794.1| hypothetical protein CNBL3070 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228728|gb|AAW45163.1| cell wall integrity protein scw1, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 955
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 200 PCSTLFIANLG--------PNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQ 251
P +TL++ NL P E+ L+ S PGF + R + P+ F +FEEV
Sbjct: 600 PINTLYVGNLPAVSPPTHPPGFLEESLRALFSRCPGFKRMSYRQKINGPMCFVEFEEVIY 659
Query: 252 ASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
AS A++ L L +GG+ + Y+++ +
Sbjct: 660 ASQAIKELYGHNLGGLVKGGIRLSYSKNSL 689
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
I+T+FV G PDD+ RE N+F PGF+ LK+ G++ A + T +AA
Sbjct: 194 ISTIFVVGFPDDMSEREFQNIFTFAPGFEAATLKFP-SGSRREPTAALLAELTQLAAHQN 252
Query: 95 LNGVKFD 101
G ++
Sbjct: 253 AQGGEYS 259
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 75 QVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKR 121
Q + FA F A+ A L G K DP +GSVL E+A+ N K+
Sbjct: 320 QTIGFARFKTRSDALTAKDHLQGKKIDPLTGSVLKAEMAKKNLHTKK 366
>gi|145531303|ref|XP_001451420.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419071|emb|CAK84023.1| unnamed protein product [Paramecium tetraurelia]
Length = 158
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 199 QPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEG 258
+P L+I NL +D+L++ Y +K+ +G AF +FE+VE+A A
Sbjct: 3 EPKKKLWIGNLAYKVQKDDLEELFKQYGQITEIKVLDKGPHVYAFVEFEKVEKAIDAFNS 62
Query: 259 LQDSTLPSSDRGGMHIEYARSKMR 282
LQ L M IEYA + R
Sbjct: 63 LQGRELKGQ---AMKIEYASGRKR 83
>gi|297824861|ref|XP_002880313.1| hypothetical protein ARALYDRAFT_483938 [Arabidopsis lyrata subsp.
lyrata]
gi|297326152|gb|EFH56572.1| hypothetical protein ARALYDRAFT_483938 [Arabidopsis lyrata subsp.
lyrata]
Length = 249
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 110/264 (41%), Gaps = 56/264 (21%)
Query: 37 TLFVSGLPDDVRAREIH---NLFRRKPG-----FDFCQLKYTGRGNQVVAFATFVNHQTA 88
T++++ L + V+ E+ N + G F LK+ G+ A+ F N +A
Sbjct: 19 TIYINNLNEKVKIDELKKSLNAVFSQFGKILEILAFKTLKHKGQ-----AWVVFDNADSA 73
Query: 89 VAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSAD 148
A+ ++N F ++ + I+ A++ S K G +V +KR + E +
Sbjct: 74 STAIAKMNDFPFYDKN---MRIQYAKTKSDVVAK-ADGTFVPREKRKRHEEKGGKKKKDH 129
Query: 149 GDSDTDEASPVRNIDSADKGDFVTTQSERATDSGN----AVAPINSEKPYEGGVQPC--- 201
+TQ AT+S AP S+ PY GGV+P
Sbjct: 130 HHD--------------------STQMGMATNSAYPGVYGAAPPLSQVPYPGGVKPNLPE 169
Query: 202 ------STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASI 254
+ LF+ NL T L+ Y GF ++M A+ G +AF +F + Q+++
Sbjct: 170 APAPPNNILFVQNLPHETTPMVLQMLFYQYQGFKEVRMVEAKPG--IAFVEFADEMQSTV 227
Query: 255 AMEGLQDSTLPSSDRGGMHIEYAR 278
AM+GLQ + + M I YA+
Sbjct: 228 AMQGLQGFKI---QQNQMLITYAK 248
>gi|255075217|ref|XP_002501283.1| predicted protein [Micromonas sp. RCC299]
gi|226516547|gb|ACO62541.1| predicted protein [Micromonas sp. RCC299]
Length = 323
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 32 DNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTGRGNQVVAFATFVNHQTA 88
DN TL +SG+P D REI ++FR GF +L K RG + FA F N + A
Sbjct: 228 DNASPTLHISGVPKDATVREICHIFRPFDGFQSARLVPSKDPERG--PLCFAEFTNPELA 285
Query: 89 VAALHELNGV---KFDPQSGSVLHIELARS--NSRKKRK 122
AL L G + DP S S LHI A++ + R RK
Sbjct: 286 FVALETLEGYLIDRDDPDS-SALHIAFAKNKPSGRMARK 323
>gi|195570021|ref|XP_002103007.1| GD19193 [Drosophila simulans]
gi|194198934|gb|EDX12510.1| GD19193 [Drosophila simulans]
Length = 342
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 240 PVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
PVAF +F++ AS AM+ LQ L SSDRG + IE+ARSKM
Sbjct: 31 PVAFIEFKDPPTASQAMQQLQGKYLLSSDRGSIRIEFARSKM 72
>gi|195348981|ref|XP_002041025.1| GM15270 [Drosophila sechellia]
gi|194122630|gb|EDW44673.1| GM15270 [Drosophila sechellia]
Length = 349
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 240 PVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
PVAF +F++ AS AM+ LQ L SSDRG + IE+ARSKM
Sbjct: 31 PVAFIEFKDPPTASQAMQQLQGKYLLSSDRGSIRIEFARSKM 72
>gi|189205961|ref|XP_001939315.1| U2 small nuclear ribonucleoprotein B [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187975408|gb|EDU42034.1| U2 small nuclear ribonucleoprotein B [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 244
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 41/254 (16%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRK-----PGFDFCQLKYTGRGNQVVAFATFVNHQTAV 89
I T++V+ L + V+ + R P D R Q AF F + + A+
Sbjct: 24 IETIYVNNLEERVKIDTMKQALTRVFQYYGPILDVIAKSSLKRKGQ--AFIVFDSEKAAL 81
Query: 90 AALHELNGVKFDPQSGSVLHIELARSNSR---KKRKPGSGAYVVIDKRTKTEANVQESSS 146
A+ E+NG + G V+ + A+++S K++ P + + + +++
Sbjct: 82 EAVEEMNGFEM---YGKVMKVHRAKTHSDETVKRKAPD-----MFEDHKRKRLTLKDFKR 133
Query: 147 ADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFI 206
A+ D+ +A+P+ + RA +G A P + V+P TLF+
Sbjct: 134 AEEDAKA-QANPI------------AAEKPRAAKTGAAAIP-------DEYVRPNKTLFL 173
Query: 207 ANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPS 266
N+ + ED L + GF ++R VAFA+FE + A A E ++ + +
Sbjct: 174 QNIPRDVDEDTLTAIFERFEGFK--EVRLVSVRAVAFAEFENEQFAITAKEATANNPIGA 231
Query: 267 SDRGGMHIEYARSK 280
+ M + Y R +
Sbjct: 232 EGK-PMKVTYQRQQ 244
>gi|392579952|gb|EIW73079.1| hypothetical protein TREMEDRAFT_70892 [Tremella mesenterica DSM
1558]
Length = 892
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 200 PCSTLFIANLG--------PNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQ 251
P +TL++ NL PN E+ L+ S GF + R + P+ F +FE++
Sbjct: 605 PINTLYVGNLPAISPPTHPPNFLEEALRGLFSRSAGFKRMSFRQKINGPMCFVEFEDIPY 664
Query: 252 ASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
A+ A++ L TL +GG+ + Y+++ +
Sbjct: 665 AAQAIQELYGHTLGGLVKGGIRLSYSKNSL 694
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
I+T+FV G PDD++ RE NLF PGF+ LK+ A + +AAL +
Sbjct: 225 ISTIFVVGFPDDMQEREFANLFTFAPGFEAATLKFPSGQRHREPTAALLAELQHLAALQQ 284
Query: 95 LNG 97
+G
Sbjct: 285 EHG 287
>gi|145500107|ref|XP_001436037.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403175|emb|CAK68640.1| unnamed protein product [Paramecium tetraurelia]
Length = 158
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 199 QPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEG 258
+P L+I NL +D+L++ Y +K+ +G AF +FE+VE+A A
Sbjct: 3 EPKKKLWIGNLAYKVQKDDLEELFKQYGQITEIKVLDKGPHVYAFVEFEKVEKAIEAYNS 62
Query: 259 LQDSTLPSSDRGGMHIEYARSKMR 282
LQ L M IEYA + R
Sbjct: 63 LQGRELKGQ---AMKIEYASGRKR 83
>gi|222640974|gb|EEE69106.1| hypothetical protein OsJ_28175 [Oryza sativa Japonica Group]
Length = 268
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-----RARGGMP--VAFADFEEVEQASI 254
STL++ L NCT E+ + GF +++ R GG P + F DF+ QA++
Sbjct: 169 STLYVEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDNPAQATL 228
Query: 255 AMEGLQDSTLPSSDRGGMHIEYARSKM 281
A+E LQ DR H+ S+
Sbjct: 229 ALEALQGYKFDEHDRDSAHLRLQFSRF 255
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 17 PPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTG 71
P PP+P + +TL+V GLP + RE+ ++FR GF +L ++ G
Sbjct: 159 PEPPLPA---------DASSTLYVEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPG 209
Query: 72 RGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIEL 112
V+ F F N A AL L G KFD H+ L
Sbjct: 210 GDPHVLCFVDFDNPAQATLALEALQGYKFDEHDRDSAHLRL 250
>gi|218201560|gb|EEC83987.1| hypothetical protein OsI_30140 [Oryza sativa Indica Group]
Length = 218
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-----RARGGMP--VAFADFEEVEQASI 254
STL++ L NCT E+ + GF +++ R GG P + F DF+ QA++
Sbjct: 119 STLYVEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDNPAQATL 178
Query: 255 AMEGLQDSTLPSSDRGGMHIEYARSKM 281
A+E LQ DR H+ S+
Sbjct: 179 ALEALQGYKFDEHDRDSAHLRLQFSRF 205
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 17 PPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTG 71
P PP+P + +TL+V GLP + RE+ ++FR GF +L ++ G
Sbjct: 109 PEPPLPA---------DASSTLYVEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPG 159
Query: 72 RGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIEL 112
V+ F F N A AL L G KFD H+ L
Sbjct: 160 GDPHVLCFVDFDNPAQATLALEALQGYKFDEHDRDSAHLRL 200
>gi|449541608|gb|EMD32591.1| hypothetical protein CERSUDRAFT_118631 [Ceriporiopsis subvermispora
B]
Length = 272
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 122/291 (41%), Gaps = 40/291 (13%)
Query: 1 MAHPPYDPYYL-----PPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVR----ARE 51
+A PP DP + PI P P +P PP Q+ ++ TL++ L + ++ +
Sbjct: 8 LAAPPIDPNAMQGVVQAPI-PIPSTIPAPPQPSQEPEHISETLYIQNLNEKIKIPVLKQS 66
Query: 52 IHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIE 111
+ +LF+ G + ++ + AF +F + ++A AL E+ G P + I
Sbjct: 67 LRSLFKTY-GEVLDVVAHSNLRMRGQAFVSFDSAESAQKALKEVRGF---PLYSKPMQIS 122
Query: 112 LARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKGDFV 171
ARS S V+ + + ++ + T +P+ K F
Sbjct: 123 FARSRSD----------AVVKRLDANNYDAHKARRMEQKKQTRYTNPL-------KRKFR 165
Query: 172 TTQSERATDSGNAVAPI----NSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPG 227
+ D AV P+ N + P E + P LF+ NL + ++D+L S YP
Sbjct: 166 QRRLAAEVDGAGAV-PVSKRPNVQMPDE-YLPPNKILFLQNLPESVSKDQLMALFSQYPN 223
Query: 228 FNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYAR 278
+ +++ +AF ++ + A++A E L + L ++ + I +AR
Sbjct: 224 LHEVRL-IPTKKDIAFVEYLDEGSATVAKEALHNYKLDGENK--IKITFAR 271
>gi|449469074|ref|XP_004152246.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
A-like [Cucumis sativus]
Length = 248
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 186 APINSEKPYEGGVQ-------PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARG 237
A +S+ PY GGV P S LF+ NL T L+ YPGF ++M A+
Sbjct: 151 ATAHSQVPYSGGVMVPEAPAPPNSILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAKP 210
Query: 238 GMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYAR 278
G +AF ++ + Q+++AM+ LQ + + + M I YA+
Sbjct: 211 G--IAFVEYSDEVQSTVAMQALQGFKM--NPQNSMLITYAK 247
>gi|255549562|ref|XP_002515833.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223545062|gb|EEF46575.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 232
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 33 NGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQT 87
+ +TLFV GLP D RE+ ++FR G+ +L + G V+ F F++
Sbjct: 130 DATSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRRPGGDPLVLCFVDFLSPAH 189
Query: 88 AVAALHELNGVKFDPQSGSVLHIEL 112
A A+ L G KFD +H+ L
Sbjct: 190 AATAMDALQGYKFDEHDRDSVHLRL 214
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-----RARGGMPV--AFADFEEVEQASI 254
STLF+ L +C+ E+ + G+ +++ R GG P+ F DF A+
Sbjct: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRRPGGDPLVLCFVDFLSPAHAAT 192
Query: 255 AMEGLQDSTLPSSDRGGMH--IEYAR 278
AM+ LQ DR +H +++AR
Sbjct: 193 AMDALQGYKFDEHDRDSVHLRLQFAR 218
>gi|290992905|ref|XP_002679074.1| predicted protein [Naegleria gruberi]
gi|284092689|gb|EFC46330.1| predicted protein [Naegleria gruberi]
Length = 212
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 75/189 (39%), Gaps = 55/189 (29%)
Query: 78 AFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKT 137
AF F + TA AA +LNG F + +HI A+S S
Sbjct: 65 AFIVFKDVATATAAKKKLNGYVFHDKP---MHINFAKSKS-------------------- 101
Query: 138 EANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGG 197
++A D + +E R + + QS R E
Sbjct: 102 ------DATAKLDGNYEEYKAKRKVKQES-----SKQSRR-----------------EEN 133
Query: 198 VQPCSTLFIANLGPNCTED-ELKQTL-SVYPGFNMLKMRARGGMPVAFADFEEVEQASIA 255
+ P S LFI NL + + EL +TL + Y G+ K+R G VAF ++E +EQA+ A
Sbjct: 134 LVPSSVLFIENLPRDVEKSSELLETLFNNYDGYK--KLRLVGEKGVAFVEYETIEQATSA 191
Query: 256 MEGLQDSTL 264
EGLQ +
Sbjct: 192 REGLQSWKI 200
>gi|449462154|ref|XP_004148806.1| PREDICTED: uncharacterized protein LOC101222348 isoform 1 [Cucumis
sativus]
gi|449462156|ref|XP_004148807.1| PREDICTED: uncharacterized protein LOC101222348 isoform 2 [Cucumis
sativus]
Length = 257
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
NTL+V GLP D RE+ ++FR G+ +L K+ G ++ F F N A
Sbjct: 158 NTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAAT 217
Query: 91 ALHELNGVKFDPQ--SGSVLHIELAR 114
A+ L G K D Q + L ++ +R
Sbjct: 218 AMSALQGYKMDEQDPESNYLRLQFSR 243
>gi|325182719|emb|CCA17174.1| U1 small nuclear ribonucleoprotein A putative [Albugo laibachii
Nc14]
Length = 234
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
P LF+ +L P+C +D L+ Y G+ ++M G +AF +F + QAS+A++GL
Sbjct: 159 PHHILFLQDLPPSCNQDMLRVLFEQYHGYKEVRMVP--GKSLAFVEFGDESQASVALQGL 216
Query: 260 QDSTLPSSDRGGMHIEYAR 278
L S+D + I +A+
Sbjct: 217 YGFKLTSTD--VLKISFAK 233
>gi|354544405|emb|CCE41128.1| hypothetical protein CPAR2_301170 [Candida parapsilosis]
Length = 776
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 32/114 (28%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR----------------------- 236
PC+TL++ NL P+ TE EL+ GF L R +
Sbjct: 589 PCNTLYVGNLPPDATEAELRALFQPQKGFRRLSFRTKNSTNNNTGSSTSTSTSTGSGSSN 648
Query: 237 ----GGMPVAFADFEEVEQASIAMEGLQDSTLP-----SSDRGGMHIEYARSKM 281
P+ F +FE+V A+ A+ L TLP +S +GG+ + ++++ +
Sbjct: 649 SSGHNHGPMCFVEFEDVAHATRALAELYGRTLPRPHVGNSGKGGIRLSFSKNPL 702
>gi|224118350|ref|XP_002317797.1| predicted protein [Populus trichocarpa]
gi|222858470|gb|EEE96017.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
+TLFV GLP D RE+ ++FR G+ +L ++ G V+ F F++ A
Sbjct: 134 STLFVEGLPSDCTRREVSHIFRPFVGYKEVRLVSKESRHPGGDPLVLCFVDFLSPAHAAT 193
Query: 91 ALHELNGVKFDPQSGSVLHIEL 112
A+ L G +FD H+ L
Sbjct: 194 AMDALQGYRFDEHDRDSFHLRL 215
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-----GGMPV--AFADFEEVEQASI 254
STLF+ L +CT E+ + G+ +++ ++ GG P+ F DF A+
Sbjct: 134 STLFVEGLPSDCTRREVSHIFRPFVGYKEVRLVSKESRHPGGDPLVLCFVDFLSPAHAAT 193
Query: 255 AMEGLQDSTLPSSDRGGMH--IEYAR 278
AM+ LQ DR H +++AR
Sbjct: 194 AMDALQGYRFDEHDRDSFHLRLQFAR 219
>gi|169611634|ref|XP_001799235.1| hypothetical protein SNOG_08932 [Phaeosphaeria nodorum SN15]
gi|160702333|gb|EAT84100.2| hypothetical protein SNOG_08932 [Phaeosphaeria nodorum SN15]
Length = 204
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 27/201 (13%)
Query: 78 AFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKT 137
AF F + ++A+ A+ E++G + G L + A+++S + K + KR +
Sbjct: 30 AFVVFDSEKSALEAIEEMSGFEL---YGKALKVSKAKTHSDETVKRKAAEMFEEHKRKRL 86
Query: 138 EANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGG 197
+ + D + +A+P VTT+ RA SG AV P +
Sbjct: 87 MQKDFKRAEEDAKA---QANPA-----------VTTEKPRAAKSGAAVVP-------DEY 125
Query: 198 VQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAME 257
V+P LF+ N+ + E++L + GF ++R VAFA+FE EQ +I +
Sbjct: 126 VRPNKVLFLQNIPRDIDEEDLTNVFDRFEGFK--EVRLVSVRAVAFAEFEN-EQFAITAK 182
Query: 258 GLQDSTLPSSDRGGMHIEYAR 278
+T ++ M + Y R
Sbjct: 183 EATANTPIGAEGKPMKVTYQR 203
>gi|449456997|ref|XP_004146235.1| PREDICTED: uncharacterized protein LOC101218789 [Cucumis sativus]
gi|449529543|ref|XP_004171759.1| PREDICTED: uncharacterized protein LOC101224897 [Cucumis sativus]
Length = 232
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
NTLFV GLP RE+ ++FR G+ +L + GR V+ F FV+ A
Sbjct: 133 NTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFVSPAHAAT 192
Query: 91 ALHELNGVKFD 101
A+ L G KFD
Sbjct: 193 AMDALQGYKFD 203
>gi|302832471|ref|XP_002947800.1| hypothetical protein VOLCADRAFT_103581 [Volvox carteri f.
nagariensis]
gi|300267148|gb|EFJ51333.1| hypothetical protein VOLCADRAFT_103581 [Volvox carteri f.
nagariensis]
Length = 224
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
P LF+ NL N E L +PGF ++M AR G +AF +FE Q++ AM+G
Sbjct: 148 PNKILFVQNLPENSNEAMLGMLFQQFPGFREVRMVEARPG--IAFVEFENDMQSTTAMQG 205
Query: 259 LQDSTLPSSDRGGMHIEYAR 278
LQ + ++ M+I YA+
Sbjct: 206 LQGFKITPAN--AMNISYAK 223
>gi|223973687|gb|ACN31031.1| unknown [Zea mays]
Length = 221
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 16/105 (15%)
Query: 17 PPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTG 71
P PP+PP + NTL++ G+P D RE+ ++FR GF +L K+ G
Sbjct: 110 PEPPLPP---------DASNTLYIEGVPSDCTRREVSHIFRPFVGFREVRLVNKEPKHPG 160
Query: 72 RGNQVVAFATFVNHQTAVAALHELNGVKFDP--QSGSVLHIELAR 114
V+ F F + AL L G KFD ++ L ++ AR
Sbjct: 161 GDPIVLCFVDFAEPTQSAIALDALQGYKFDEHDRNSPNLRLQFAR 205
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-----GGMPV--AFADFEEVEQASI 254
+TL+I + +CT E+ + GF +++ + GG P+ F DF E Q++I
Sbjct: 120 NTLYIEGVPSDCTRREVSHIFRPFVGFREVRLVNKEPKHPGGDPIVLCFVDFAEPTQSAI 179
Query: 255 AMEGLQDSTLPSSDRGG--MHIEYAR 278
A++ LQ DR + +++AR
Sbjct: 180 ALDALQGYKFDEHDRNSPNLRLQFAR 205
>gi|156088599|ref|XP_001611706.1| U2 small nuclear ribonucleoprotein B' [Babesia bovis T2Bo]
gi|154798960|gb|EDO08138.1| U2 small nuclear ribonucleoprotein B', putative [Babesia bovis]
Length = 213
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 95/252 (37%), Gaps = 65/252 (25%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQ-----LKYTGRGNQVV---AFATFVNHQT 87
+TL+VS L D + ++ RK ++F + + R Q + AF +F +
Sbjct: 16 HTLYVSNLDDRIHVNDL-----RKLLYEFLIPYGEIVDISARRTQKLRGQAFVSFSEIAS 70
Query: 88 AVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSA 147
A++A +NG F + L + AR+ K KP ++ R+ V +
Sbjct: 71 AISAFKGVNGRSFLDRP---LKVAYARNQGYKSMKPAECYRLLTSARSLPSEQVMIEDTL 127
Query: 148 DGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIA 207
D +S EGG + TLF+
Sbjct: 128 DANS-------------------------------------------EGGER--HTLFVE 142
Query: 208 NLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSS 267
NL P+ + ++ YPG+ R G VAF DF Q +A++GLQ ++ S
Sbjct: 143 NLHPDMNKMSVELLFQQYPGYK--DTRFVEGKCVAFVDFATAYQGEVALQGLQGFSVSHS 200
Query: 268 DRGGMHIEYARS 279
+ I +A+S
Sbjct: 201 H--ALRISFAKS 210
>gi|405123760|gb|AFR98523.1| RNA binding protein [Cryptococcus neoformans var. grubii H99]
Length = 284
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 110/259 (42%), Gaps = 40/259 (15%)
Query: 32 DNGINTLFVSGLPDDVR----AREIHNLFR----RKPGFDFCQLKYTGRGNQVVAFATFV 83
DN TL++ L + VR ++NLF+ +P ++ G+ AF +F
Sbjct: 55 DNACETLYLQNLNEKVRIPVMKETLYNLFKPYRPLQPIIAHHNIRMRGQ-----AFVSFP 109
Query: 84 NHQTAVAALHELNGVKFDPQSGSVLHIELAR--SNSRKKRKPGSGAYVVIDKRTKTEANV 141
+ ++A A ++N P G + I+ A+ S+S KRK + KR E +
Sbjct: 110 DIESANEARKDVNEF---PLYGKSIQIQFAKGLSDSIVKRKGDEREFEEHTKRRLEEKKL 166
Query: 142 QESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPC 201
+ ++ P+R A T A +G A + P E + P
Sbjct: 167 KRKNN-----------PLRQKSQAKLRADTT-----AGTAGPAAKKQRLQMPDEY-LPPN 209
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-GGMPVAFADFEEVEQASIAMEGLQ 260
S LF+ NL T ++L++ V+PG ++++R +AF +F + A+IA + L
Sbjct: 210 SVLFVQNLPDGTTSEDLREVFEVHPG--LIEIRTIPAKKDIAFVEFADEGAATIAKDALH 267
Query: 261 DSTLPSSDRGGMHIEYARS 279
+ + + M + YAR
Sbjct: 268 NFKIDGETK--MKVTYARK 284
>gi|168057049|ref|XP_001780529.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668007|gb|EDQ54623.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 647
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 104/247 (42%), Gaps = 32/247 (12%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRK---PGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALH 93
+++V L +V +++ +F + C+ T R + +A +VN+ +A A
Sbjct: 25 SVYVGDLEHNVSEAQLYEIFSQTGPVVSIRVCRDLITRRS---LGYA-YVNYHSAQDATR 80
Query: 94 ELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVV-IDKRTKTEANVQESSSADGDSD 152
L + F P +G + I + + ++ + ++ +DK +A + ++ SA G
Sbjct: 81 ALELLNFTPVNGKPIRIMFSHRDPSLRKSGAANIFIKNLDKAIDNKA-LHDTFSAFGGIL 139
Query: 153 TDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINS-----------------EKPYE 195
+ V S + Q E+ + +A+ +N E+
Sbjct: 140 S---CKVATDSSGQSKGYGFVQFEKEESAQSAIEKVNGMLLNDKQVFVGPFVRRQERDLS 196
Query: 196 GGVQPCSTLFIANLGPNCTEDELKQTLSVY-PGFNMLKMRARGGMP--VAFADFEEVEQA 252
GGV + +++ NLG N T+DELK+ Y P + + MR G F +FE + A
Sbjct: 197 GGVSKFNNVYVKNLGENTTDDELKKVFGAYGPISSAVVMRDNEGKSKCFGFVNFELADDA 256
Query: 253 SIAMEGL 259
+ A+E L
Sbjct: 257 AKAVEAL 263
>gi|413953430|gb|AFW86079.1| hypothetical protein ZEAMMB73_802063 [Zea mays]
Length = 262
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 16/105 (15%)
Query: 17 PPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTG 71
P PP+PP + NTL++ G+P D RE+ ++FR GF +L K+ G
Sbjct: 151 PEPPLPP---------DASNTLYIEGVPSDCTRREVSHIFRPFVGFREVRLVNKEPKHPG 201
Query: 72 RGNQVVAFATFVNHQTAVAALHELNGVKFDP--QSGSVLHIELAR 114
V+ F F + AL L G KFD ++ L ++ AR
Sbjct: 202 GDPIVLCFVDFAEPTQSAIALDALQGYKFDEHDRNSPNLRLQFAR 246
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-----GGMPV--AFADFEEVEQASI 254
+TL+I + +CT E+ + GF +++ + GG P+ F DF E Q++I
Sbjct: 161 NTLYIEGVPSDCTRREVSHIFRPFVGFREVRLVNKEPKHPGGDPIVLCFVDFAEPTQSAI 220
Query: 255 AMEGLQDSTLPSSDRGG--MHIEYAR 278
A++ LQ DR + +++AR
Sbjct: 221 ALDALQGYKFDEHDRNSPNLRLQFAR 246
>gi|71021503|ref|XP_760982.1| hypothetical protein UM04835.1 [Ustilago maydis 521]
gi|46101057|gb|EAK86290.1| hypothetical protein UM04835.1 [Ustilago maydis 521]
Length = 1001
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 200 PCSTLFIANLGPNCT-------EDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQA 252
P +TLF+ NL N + ED+L+ S GF R + P+ F +F +V A
Sbjct: 851 PVNTLFVGNLPSNASSAVLSQIEDQLRAVFSSCRGFRQFSFRLKSNGPMCFVEFGDVHTA 910
Query: 253 SIAMEGLQDSTLPSSDR-GGMHIEYARSKMRKL 284
S AM L +L + + GG+ + ++++ + ++
Sbjct: 911 SQAMSELNGHSLGGAIKNGGIRLSFSKNPLFRM 943
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 75 QVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKP 123
Q++ FA F A+ A LNG K D G VL E+A+ N K++P
Sbjct: 502 QIIGFAKFRTRADALEARDALNGRKVDADKGCVLKTEMAKKNLHTKQRP 550
>gi|356576047|ref|XP_003556146.1| PREDICTED: uncharacterized protein LOC100813445 isoform 2 [Glycine
max]
Length = 245
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 16 PPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYT 70
P P VP PP + +TL+V GLP D RE+ ++FR G+ +L K+
Sbjct: 133 PGPETVPLPP-------DASSTLYVEGLPSDSTRREVAHIFRPFVGYREVRLVSKESKHR 185
Query: 71 GRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIEL 112
G ++ F F N A AL L G K D + H+ L
Sbjct: 186 GGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRL 227
>gi|356576045|ref|XP_003556145.1| PREDICTED: uncharacterized protein LOC100813445 isoform 1 [Glycine
max]
Length = 252
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 16 PPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYT 70
P P VP PP + +TL+V GLP D RE+ ++FR G+ +L K+
Sbjct: 140 PGPETVPLPP-------DASSTLYVEGLPSDSTRREVAHIFRPFVGYREVRLVSKESKHR 192
Query: 71 GRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIEL 112
G ++ F F N A AL L G K D + H+ L
Sbjct: 193 GGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRL 234
>gi|241957399|ref|XP_002421419.1| RNA binding protein, putative; cell cycle modulator, dose-dependent
inhibitor of start, putative [Candida dubliniensis CD36]
gi|223644763|emb|CAX40754.1| RNA binding protein, putative [Candida dubliniensis CD36]
Length = 689
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 32/114 (28%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARG---------------------- 237
PC+TL++ NL P+ TE EL+ S GF L R +
Sbjct: 529 PCNTLYVGNLPPDATESELRSLFSPQKGFRRLSFRTKNQPSSSNGSGGGSGSGSGGGGGG 588
Query: 238 ------GMPVAFADFEEVEQASIAMEGLQDSTLP----SSDRGGMHIEYARSKM 281
P+ F +FE+V A+ A+ L LP + +GG+ + ++++ +
Sbjct: 589 GGGGHSHGPMCFVEFEDVAHATRALAELYGRALPRPNGGNGKGGIRLSFSKNPL 642
>gi|1345458|emb|CAA78664.1| Cpo 61.2 [Drosophila melanogaster]
Length = 536
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 451 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 510
Query: 92 LHELN 96
+L
Sbjct: 511 KQDLQ 515
>gi|429329410|gb|AFZ81169.1| splicing factor 1, putative [Babesia equi]
Length = 207
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ + + L+V LPDD RE+ F + +C+LK T G AF F +++ A
Sbjct: 2 ESDKVVRLYVGNLPDDCTQREVEEEFEKFGKIVYCELKRTVSG-LPFAFVEFSDYRDARD 60
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRK---PGSGAYVV 130
A+ +G +F+ G L +E+ S+ R+ R+ P G Y+V
Sbjct: 61 AIKNKDGAEFN---GKRLRVEVPFSSKRQSRRSDPPRKGKYLV 100
>gi|7512025|pir||B46230 RNA-binding protein homolog Cpo (clone 61.2) - fruit fly
(Drosophila melanogaster)
Length = 536
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAA 91
+ TLFVSGLP D + RE++ LFR G++ LK T + + V F TF A AA
Sbjct: 451 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 510
Query: 92 LHELN 96
+L
Sbjct: 511 KQDLQ 515
>gi|226492197|ref|NP_001148276.1| LOC100281884 [Zea mays]
gi|195617106|gb|ACG30383.1| nucleic acid binding protein [Zea mays]
Length = 297
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNH 85
+N N LFV LP D RE+ +LFR PGF ++ + +G V+ F F N
Sbjct: 188 SENESNILFVDCLPTDCTRREVAHLFRCFPGFKDIRVVHKEPRRSGDKAYVLCFVEFENA 247
Query: 86 QTAVAALHELNGVKFDPQS--GSVLHIELAR 114
+ A + L G +FD + L I AR
Sbjct: 248 KFARTPMQALQGYRFDDRKPDDRCLEIHFAR 278
>gi|255637493|gb|ACU19073.1| unknown [Glycine max]
Length = 251
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 16 PPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYT 70
P P VP PP + +TL+V GLP D RE+ ++FR G+ +L K+
Sbjct: 139 PGPETVPLPP-------DASSTLYVEGLPSDSTRREVAHIFRPFVGYREVRLVSKESKHR 191
Query: 71 GRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIEL 112
G ++ F F N A AL L G K D + H+ L
Sbjct: 192 GGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRL 233
>gi|307109197|gb|EFN57435.1| hypothetical protein CHLNCDRAFT_142904 [Chlorella variabilis]
Length = 529
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 33 NGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL------KYTGRGNQVVAFATFVNHQ 86
+ NTL++ GLP DV RE+ ++FR + GF +L K+ G V+AF + +
Sbjct: 424 DACNTLYIEGLPSDVTRRELGHIFRSREGFRSLRLVIKDSKKHVGE-KLVMAFVEYSSTY 482
Query: 87 TAVAALHELNGVKFD 101
A A+ L G FD
Sbjct: 483 FAAQAMDTLQGYPFD 497
>gi|224088786|ref|XP_002308540.1| predicted protein [Populus trichocarpa]
gi|222854516|gb|EEE92063.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
N LFV GLP D RE+ +LFR G+ ++ + +G V+ F F + A
Sbjct: 174 NILFVDGLPTDCTRREVGHLFRPFIGYKEIRVVHKEARKSGDRATVLCFVEFTDANCAAT 233
Query: 91 ALHELNGVKFDPQS--GSVLHIELAR 114
A+ L G KFD + L I+ AR
Sbjct: 234 AMEALQGYKFDDKKPDSPTLKIQFAR 259
>gi|356535806|ref|XP_003536434.1| PREDICTED: uncharacterized protein LOC100815695 [Glycine max]
Length = 251
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 16 PPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYT 70
P P VP PP + +TL+V GLP D RE+ ++FR G+ +L K+
Sbjct: 139 PGPETVPLPP-------DASSTLYVEGLPSDSTRREVAHIFRPFVGYREVRLVSKESKHR 191
Query: 71 GRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIEL 112
G ++ F F N A AL L G K D + H+ L
Sbjct: 192 GGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRL 233
>gi|356576041|ref|XP_003556143.1| PREDICTED: uncharacterized protein LOC100812551 isoform 1 [Glycine
max]
Length = 252
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 16 PPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYT 70
P P VP PP + +TL+V GLP D RE+ ++FR G+ +L K+
Sbjct: 140 PGPETVPLPP-------DASSTLYVEGLPSDSTRREVAHIFRPFVGYREVRLVSKESKHR 192
Query: 71 GRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIEL 112
G ++ F F N A AL L G K D + H+ L
Sbjct: 193 GGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRL 234
>gi|225429574|ref|XP_002280068.1| PREDICTED: uncharacterized protein LOC100257637 isoform 1 [Vitis
vinifera]
gi|296081671|emb|CBI20676.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
N LFV GLP D RE+ +LFR GF ++ +++G V+ F F + +
Sbjct: 139 NILFVDGLPKDCTRREVGHLFRPFIGFKEIRVVHKEPRHSGDKAMVLCFVEFNDASCSRT 198
Query: 91 ALHELNGVKFD 101
AL L G KFD
Sbjct: 199 ALEALQGYKFD 209
>gi|356576043|ref|XP_003556144.1| PREDICTED: uncharacterized protein LOC100812551 isoform 2 [Glycine
max]
Length = 244
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 16 PPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYT 70
P P VP PP + +TL+V GLP D RE+ ++FR G+ +L K+
Sbjct: 132 PGPETVPLPP-------DASSTLYVEGLPSDSTRREVAHIFRPFVGYREVRLVSKESKHR 184
Query: 71 GRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIEL 112
G ++ F F N A AL L G K D + H+ L
Sbjct: 185 GGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRL 226
>gi|156088273|ref|XP_001611543.1| U2 small nuclear ribonucleoprotein B' [Babesia bovis T2Bo]
gi|154798797|gb|EDO07975.1| U2 small nuclear ribonucleoprotein B', putative [Babesia bovis]
Length = 285
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 114/298 (38%), Gaps = 46/298 (15%)
Query: 11 LPPIHPPPPPVPPPPYHHQQQDNGI---NTLFVSGLPD----DVRAREIHNLF-RRKPGF 62
+PP+ P PVPP D I T+++ + + DV E+ +F R
Sbjct: 3 IPPVMRPHRPVPPRYTMKVDADPSIPPNQTIYIKNINERIKVDVLKAELLKMFGRFGKIL 62
Query: 63 DFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRK 122
D L R Q AF F N ++A ALHE+ G D G + I AR S K
Sbjct: 63 DIVALTSFWRKGQ--AFIIFDNVESATNALHEMQGFVMD---GHAMQINYAREKSDIIAK 117
Query: 123 PGSGAY----------VVIDKRTKTEANVQE-------SSSADGDSDTDEASPVRNIDSA 165
G G Y I R + + E + + +G + + ++ + +A
Sbjct: 118 -GQGTYRPRPEGPKKPRAIKDREQEQLKRFERLQHDYLTGAIEGMTGPGDPKLIQALQAA 176
Query: 166 DKGDFVTTQSERAT-----DSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQ 220
+T Q+ T DS + + S G+ P TLF+ L + ++
Sbjct: 177 Q----ITFQAMALTKGPGVDSHDDSSRYASTASMARGL-PNRTLFVEGLPEGVSLADVNA 231
Query: 221 TLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYAR 278
+ GF + R VAF DF+ A AM+ LQ+ + S + I YA+
Sbjct: 232 VFARSVGFQ--EARVIAARKVAFIDFDNEFNAGCAMQALQEHPMGDST---LRISYAK 284
>gi|343426262|emb|CBQ69793.1| related to WHI3-involved in regulation of cell size [Sporisorium
reilianum SRZ2]
Length = 1021
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 200 PCSTLFIANLGPNCT-------EDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQA 252
P +TLF+ NL N ED L+ GF + R + P+ F +FE+V A
Sbjct: 901 PVNTLFVGNLPSNAASAALSQIEDHLRGVFGSCRGFRQISFRLKSNGPMCFVEFEDVYTA 960
Query: 253 SIAMEGLQDSTLPSSDR-GGMHIEYARSKMRKL 284
S AM L +L + + GG+ + ++++ + ++
Sbjct: 961 SKAMSELNGHSLGGAIKNGGIRLSFSKNPLFRM 993
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 71 GRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKP 123
G+ Q++ FA F A+ A LNG K D + G VL E+A+ N K++P
Sbjct: 507 GKIKQIIGFAKFRTRAEALEARDALNGRKVDVEKGCVLKTEMAKKNLHTKQRP 559
>gi|297743906|emb|CBI36876.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 14/103 (13%)
Query: 186 APINSEKPYEGGVQ---------PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RA 235
AP S+ PY GG + P + LFI NL T L+ YPGF ++M A
Sbjct: 133 APPLSQIPYLGGAKSAVPEAPAPPNNILFIQNLPHEATPMMLQMFFCQYPGFKEVRMVEA 192
Query: 236 RGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYAR 278
+ G +AF ++ + Q+++AM+GLQ L + + M I YA+
Sbjct: 193 KPG--IAFVEYGDEMQSTVAMQGLQG--LKINQQNPMLITYAK 231
>gi|409052167|gb|EKM61643.1| hypothetical protein PHACADRAFT_248371 [Phanerochaete carnosa
HHB-10118-sp]
Length = 267
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 111/283 (39%), Gaps = 43/283 (15%)
Query: 13 PIHPPP-PPVPPPPY--------HHQQQDNGINTLFVSGLPDDVRA----REIHNLFRRK 59
P HPPP P V P P QQ ++ TL++ L + ++ + LF+
Sbjct: 10 PAHPPPGPIVAPAPMAAVVPESQEPQQPESATETLYIQNLNEKIKVPVLKASLRGLFKSY 69
Query: 60 PGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRK 119
G + ++ + AF +F N + A AL E+ G P + I AR+ S
Sbjct: 70 -GEVLDVVAHSNLRMRGQAFVSFENAEVAKKALKEVRGF---PLYSKPMQISYARTRSD- 124
Query: 120 KRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERAT 179
V+ K + + T +P+ K F +
Sbjct: 125 ---------AVVKKLEPATLDAHLERRKEHKKATRYTNPI-------KAKFRQKRLAAEM 168
Query: 180 DSGNAVAPINSEKPY----EGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRA 235
D +AV P+ S +P + + P LF+ NL N T+D+L S YP +++
Sbjct: 169 DGASAV-PV-SRRPNVMMPDEYLPPNKILFLQNLPENVTKDQLMALFSQYPNLYEVRL-I 225
Query: 236 RGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYAR 278
+AF ++ + A++A + L + L ++ + I +AR
Sbjct: 226 PTKKDIAFVEYLDEASATVAKDALHNYKLDGENK--IKITFAR 266
>gi|374256077|gb|AEZ00900.1| putative RNA recognition motif-containing protein, partial [Elaeis
guineensis]
Length = 294
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 16/105 (15%)
Query: 17 PPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTG 71
P PP+P + NTLFV GLP + RE+ ++FR GF +L ++ G
Sbjct: 171 PEPPLP---------QDASNTLFVEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPG 221
Query: 72 RGNQVVAFATFVNHQTAVAALHELNGVKFDP--QSGSVLHIELAR 114
V+ F F A AL L G KFD + + L ++ AR
Sbjct: 222 GDPLVLCFVDFSTPAQAAVALDALQGYKFDEHDRESANLRLQFAR 266
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-----RARGGMP--VAFADFEEVEQASI 254
+TLF+ L NCT E+ + GF +++ R GG P + F DF QA++
Sbjct: 181 NTLFVEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPLVLCFVDFSTPAQAAV 240
Query: 255 AMEGLQDSTLPSSDR--GGMHIEYAR 278
A++ LQ DR + +++AR
Sbjct: 241 ALDALQGYKFDEHDRESANLRLQFAR 266
>gi|302143942|emb|CBI23047.3| unnamed protein product [Vitis vinifera]
Length = 230
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 19 PPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRG 73
P +P PP + +TLFV GLP + RE+ ++FR G+ +L +++G
Sbjct: 121 PELPLPP-------DASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGD 173
Query: 74 NQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIEL 112
V+ F FV+ A A+ L G KFD +++ L
Sbjct: 174 PLVLCFVDFVSPAHAATAMDALQGYKFDEHDRDSVNLRL 212
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-----RARGGMP--VAFADFEEVEQASI 254
STLF+ L NCT E+ + G+ +++ R GG P + F DF A+
Sbjct: 131 STLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLCFVDFVSPAHAAT 190
Query: 255 AMEGLQDSTLPSSDRGG--MHIEYAR 278
AM+ LQ DR + +++AR
Sbjct: 191 AMDALQGYKFDEHDRDSVNLRLQFAR 216
>gi|195107385|ref|XP_001998294.1| GI23707 [Drosophila mojavensis]
gi|193914888|gb|EDW13755.1| GI23707 [Drosophila mojavensis]
Length = 214
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 240 PVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
PVAF +F + A+ AM LQ L SSDRG + IEYA++KM
Sbjct: 60 PVAFIEFNDAPSAAQAMHQLQGKYLLSSDRGCIRIEYAKTKM 101
>gi|225437410|ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Vitis vinifera]
Length = 245
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 14/103 (13%)
Query: 186 APINSEKPYEGGVQ---------PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RA 235
AP S+ PY GG + P + LFI NL T L+ YPGF ++M A
Sbjct: 146 APPLSQIPYLGGAKSAVPEAPAPPNNILFIQNLPHEATPMMLQMFFCQYPGFKEVRMVEA 205
Query: 236 RGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYAR 278
+ G +AF ++ + Q+++AM+GLQ L + + M I YA+
Sbjct: 206 KPG--IAFVEYGDEMQSTVAMQGLQG--LKINQQNPMLITYAK 244
>gi|413953429|gb|AFW86078.1| hypothetical protein ZEAMMB73_802063 [Zea mays]
Length = 130
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 16/105 (15%)
Query: 17 PPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTG 71
P PP+PP + NTL++ G+P D RE+ ++FR GF +L K+ G
Sbjct: 19 PEPPLPP---------DASNTLYIEGVPSDCTRREVSHIFRPFVGFREVRLVNKEPKHPG 69
Query: 72 RGNQVVAFATFVNHQTAVAALHELNGVKFDP--QSGSVLHIELAR 114
V+ F F + AL L G KFD ++ L ++ AR
Sbjct: 70 GDPIVLCFVDFAEPTQSAIALDALQGYKFDEHDRNSPNLRLQFAR 114
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-----GGMPV--AFADFEEVEQASI 254
+TL+I + +CT E+ + GF +++ + GG P+ F DF E Q++I
Sbjct: 29 NTLYIEGVPSDCTRREVSHIFRPFVGFREVRLVNKEPKHPGGDPIVLCFVDFAEPTQSAI 88
Query: 255 AMEGLQDSTLPSSDRGG--MHIEYAR 278
A++ LQ DR + +++AR
Sbjct: 89 ALDALQGYKFDEHDRNSPNLRLQFAR 114
>gi|359490723|ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
Length = 229
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 19 PPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRG 73
P +P PP + +TLFV GLP + RE+ ++FR G+ +L +++G
Sbjct: 120 PELPLPP-------DASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGD 172
Query: 74 NQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIEL 112
V+ F FV+ A A+ L G KFD +++ L
Sbjct: 173 PLVLCFVDFVSPAHAATAMDALQGYKFDEHDRDSVNLRL 211
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-----RARGGMP--VAFADFEEVEQASI 254
STLF+ L NCT E+ + G+ +++ R GG P + F DF A+
Sbjct: 130 STLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLCFVDFVSPAHAAT 189
Query: 255 AMEGLQDSTLPSSDRGG--MHIEYAR 278
AM+ LQ DR + +++AR
Sbjct: 190 AMDALQGYKFDEHDRDSVNLRLQFAR 215
>gi|403221977|dbj|BAM40109.1| U1/2 small nuclear ribonucleoprotein [Theileria orientalis strain
Shintoku]
Length = 206
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 197 GVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAM 256
G + TLF+ N+ + ++D L+ YPGF R G VAF D+ QA IA+
Sbjct: 129 GNEESHTLFVENIPSDMSKDSLELLFRQYPGFK--NCRFIEGRYVAFVDYSMATQAEIAL 186
Query: 257 EGLQ 260
EGLQ
Sbjct: 187 EGLQ 190
>gi|68066442|ref|XP_675204.1| small nuclear ribonucleoprotein [Plasmodium berghei strain ANKA]
gi|56494251|emb|CAH97133.1| small nuclear ribonucleoprotein (snRNP), putative [Plasmodium
berghei]
Length = 192
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 169 DFVTTQSERATDSGNAVAPINSEKP---YEGGVQPCSTLFIANLGPNCTEDELKQTLSVY 225
++ T+S+ PI + KP YE + TLF+ NL ++ L+ + Y
Sbjct: 85 NYAKTKSKIIEKLDGTYNPIKNYKPANNYENNINQF-TLFVQNLPDEINKNALEILFNQY 143
Query: 226 PGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQ 260
PGF+ ++R G VAF DF + +AM GLQ
Sbjct: 144 PGFS--EVRYIPGRNVAFIDFNSYQNGEVAMNGLQ 176
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 32 DNGIN--TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT-GRGNQVVAFATFVNHQTA 88
+N IN TLFV LPD++ + LF + PG F +++Y GR VAF F ++Q
Sbjct: 114 ENNINQFTLFVQNLPDEINKNALEILFNQYPG--FSEVRYIPGRN---VAFIDFNSYQNG 168
Query: 89 VAALHELNGVKFDPQ 103
A++ L K P+
Sbjct: 169 EVAMNGLQSFKITPE 183
>gi|403416660|emb|CCM03360.1| predicted protein [Fibroporia radiculosa]
Length = 1274
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 200 PCSTLFIANL----GP-----NCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVE 250
P +TL++ NL P N ED L+ S PG+ L R + P+ F +FE+V
Sbjct: 1039 PINTLYVGNLPTSPAPGGFPLNYLEDRLRDLFSKRPGYRKLCFRQKSNGPMCFVEFEDVN 1098
Query: 251 QASIAMEGLQDSTLPSSDR-GGMHIEYARSKM 281
A+ A+ L +TL + GG+ + Y+++ +
Sbjct: 1099 YATKALNELYGNTLNGLVKGGGIRLSYSKNPL 1130
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 30 QQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLK 68
QQ I+T+FV G P+D++ RE N+F PGF+ LK
Sbjct: 520 QQQEEISTIFVVGFPEDMQEREFQNMFTFSPGFEAATLK 558
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 75 QVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPG 124
Q++ FA F Q A+ A L G + D + G+VL E+A+ N KR PG
Sbjct: 636 QIIGFAKFRTRQEALEARDILQGRRVDIERGAVLKAEMAKKNLHTKRGPG 685
>gi|302760451|ref|XP_002963648.1| hypothetical protein SELMODRAFT_69289 [Selaginella moellendorffii]
gi|300168916|gb|EFJ35519.1| hypothetical protein SELMODRAFT_69289 [Selaginella moellendorffii]
Length = 92
Score = 45.4 bits (106), Expect = 0.027, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
+TLFV GLP D RE ++FR GF +L K T V+ F F++ + A
Sbjct: 7 STLFVDGLPSDCTRREAAHIFRPFIGFKEVRLVHKDAKRTTGEKLVLCFVEFMDAKCAAT 66
Query: 91 ALHELNGVKF---DPQSGSVLHIELAR 114
AL L G KF DP S VL + AR
Sbjct: 67 ALEALQGYKFDENDPDS-YVLRLTFAR 92
>gi|449506960|ref|XP_004162895.1| PREDICTED: uncharacterized LOC101222348 isoform 1 [Cucumis sativus]
gi|449506964|ref|XP_004162896.1| PREDICTED: uncharacterized LOC101222348 isoform 2 [Cucumis sativus]
Length = 257
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQ-------VVAFATFVNHQTA 88
NTL+V GLP D RE+ ++FR P + +L++ + ++ ++ F F N A
Sbjct: 158 NTLYVEGLPPDSSRREVAHIFR--PFVGYKELRFVSKESKHRGGDPLILCFVDFANPACA 215
Query: 89 VAALHELNGVKFDPQ--SGSVLHIELAR 114
A+ L G K D Q + L ++ +R
Sbjct: 216 ATAMSALQGYKIDEQDPESNYLRLQFSR 243
>gi|149057907|gb|EDM09150.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_a [Rattus norvegicus]
gi|149057912|gb|EDM09155.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_a [Rattus norvegicus]
gi|149057917|gb|EDM09160.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 90
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
+ TLFVSGLP D++ RE++ LFR G++ +K T + Q V F +F + A AA +
Sbjct: 6 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNA 63
Query: 95 LN 96
LN
Sbjct: 64 LN 65
>gi|357465775|ref|XP_003603172.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355492220|gb|AES73423.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 229
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
N LFV GLP D RE+ +LFR G+ ++ + +G + F F + A+
Sbjct: 133 NILFVGGLPKDCTRREVGHLFRPFIGYKDIKVVHKEPRRSGDKAMIFCFVEFTEPKCALT 192
Query: 91 ALHELNGVKFD 101
A+ L G KFD
Sbjct: 193 AMEALQGYKFD 203
>gi|345481380|ref|XP_001602182.2| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like, partial
[Nasonia vitripennis]
Length = 661
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 105/273 (38%), Gaps = 28/273 (10%)
Query: 22 PPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKY---TGRGNQVVA 78
PPP + G +F +P D+ E+ LF + +L TG N+ A
Sbjct: 151 PPPNWEGPTPGTGCE-VFCGKIPKDMYEDELIPLFEKCGKIWDLRLMMDPMTGT-NRGYA 208
Query: 79 FATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSR---KKRKPGSGAYVVIDKRT 135
F TF N A A+ EL+ + P G L + ++ N R G ++D+
Sbjct: 209 FITFTNRDAAQQAVRELDNYEIKP--GKSLKVNISVPNLRLFVGNIPKSKGKEEILDEFG 266
Query: 136 KTEANVQES---SSADGDSDTDEASPVRNIDSADKGDFVTTQ--SERATDSGNAVAPINS 190
K A + E SS D D + +S + + R G + +
Sbjct: 267 KLTAGLTEVIIYSSPD-DKKKNRGFCFLEYESHKAASLAKRRLGTGRMKVWGCDIIVDWA 325
Query: 191 ---EKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFE 247
E+P E + L++ NL +C+E++LK+ Y R + AF FE
Sbjct: 326 DPQEEPDEQTMSKVRVLYVRNLTQDCSEEKLKECFEQYGKIE----RVKKIKDYAFIHFE 381
Query: 248 EVEQASIAMEGLQDSTLPSSDRGGMHIEYARSK 280
E E A AM L + GG HIE + +K
Sbjct: 382 ERECAVKAMRELNGKEM-----GGSHIEVSLAK 409
>gi|388513795|gb|AFK44959.1| unknown [Lotus japonicus]
Length = 239
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
+TL+V GLP D RE+ ++FR G+ +L K+ G ++ F F N A
Sbjct: 140 STLYVEGLPSDSTKREVAHIFRPFVGYREVRLVTKESKHRGGDPLILCFVDFENPACAAT 199
Query: 91 ALHELNGVK---FDPQSGSVLHIELAR 114
AL L G K DP+SG L ++ +R
Sbjct: 200 ALSALQGYKVDELDPESGH-LRLQFSR 225
>gi|326533746|dbj|BAK05404.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 263
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 17 PPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTG 71
P PP+PP + NTLF+ G+P D RE+ ++FR GF +L ++ G
Sbjct: 146 PEPPLPP---------DASNTLFIEGIPTDCERREVSHIFRPFVGFQEVRLVNKEPRHPG 196
Query: 72 RGNQVVAFATFVNHQTAVAALHELNGVKFDP--QSGSVLHIELAR 114
V+ F F N A A+ L G KFD +S L ++ AR
Sbjct: 197 GDPIVLCFVDFANAAQAAIAMEALQGYKFDEHDRSSPQLRLQFAR 241
>gi|225434417|ref|XP_002271864.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Vitis vinifera]
gi|297745807|emb|CBI15863.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 20/120 (16%)
Query: 174 QSERATDSGNAVAPINSEK------PYEGGVQ--------PCSTLFIANLGPNCTEDELK 219
++E A SGNA N+E P+ G Q P + LFI NL T L+
Sbjct: 119 RAEEAQQSGNANGR-NAETNGGPTPPFRQGNQGAREPEAAPNNILFIQNLPHQTTSMMLQ 177
Query: 220 QTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYAR 278
YPGF ++M A+ G +AF +FE+ Q+S+AME LQ + + + M I YA+
Sbjct: 178 VLFQQYPGFREVRMIEAKPG--IAFVEFEDDVQSSMAMEALQGFKI--TPQNPMAIAYAK 233
>gi|268561908|ref|XP_002646556.1| Hypothetical protein CBG20414 [Caenorhabditis briggsae]
Length = 308
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
+T+F+ LP DVR +E+ +LF + + +K +GRG F F + + A A+
Sbjct: 7 DTIFIGNLPGDVREKELDSLFSKYGRINKVDVK-SGRGGAAFGFVQFSDSRDADDAVRGR 65
Query: 96 NGVKFDPQSGSVLHIEL 112
+G FD G + +EL
Sbjct: 66 DGYDFD---GKRIRVEL 79
>gi|297826425|ref|XP_002881095.1| hypothetical protein ARALYDRAFT_320780 [Arabidopsis lyrata subsp.
lyrata]
gi|297326934|gb|EFH57354.1| hypothetical protein ARALYDRAFT_320780 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 37/250 (14%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFAT-------FVNHQTAV 89
++++ L + ++ E+ +C GR VVA T +V
Sbjct: 11 SIYIQNLNEKIKKEELKRSL-------YCLFSQFGRILDVVALKTPKLRGQAWVTFSEVT 63
Query: 90 AALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADG 149
AA + + ++ P + ++ A++ S K G +V DK+ K E V+
Sbjct: 64 AASNAVRQMQNFPFYDKPMRLQYAKAKSDCLAK-AEGTFVPKDKKRKQEEKVERKREESQ 122
Query: 150 DSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANL 209
+T P N SA+ G + SG P P + LFI NL
Sbjct: 123 RPNTANG-PSANGPSANNG----VPAPSFPPSGQEAMP------------PNNILFIQNL 165
Query: 210 GPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSD 268
T L+ YPGF ++M A+ G +AF ++E+ QASIAM+ LQ + +
Sbjct: 166 PHETTSMMLQLLFEQYPGFKEIRMIDAKPG--IAFVEYEDDVQASIAMQPLQGFKI--TP 221
Query: 269 RGGMHIEYAR 278
+ M I +A+
Sbjct: 222 QNPMVISFAK 231
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
N LF+ LP + + + LF + PGF ++ G +AF + + A A+ L
Sbjct: 158 NILFIQNLPHETTSMMLQLLFEQYPGFKEIRMIDAKPG---IAFVEYEDDVQASIAMQPL 214
Query: 96 NGVKFDPQSGSVL 108
G K PQ+ V+
Sbjct: 215 QGFKITPQNPMVI 227
>gi|224068352|ref|XP_002302719.1| predicted protein [Populus trichocarpa]
gi|222844445|gb|EEE81992.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 110/260 (42%), Gaps = 50/260 (19%)
Query: 37 TLFVSGLPDDVRAREI----HNLFRR----KPGFDFCQLKYTGRGNQVVAFATFVNHQTA 88
T++++ L + ++ E+ H +F + F LK+ G+ A+ F + Q+A
Sbjct: 23 TIYINNLNEKIKIDELKKALHAVFSQFGKILEILAFKTLKHKGQ-----AWVVFEDVQSA 77
Query: 89 VAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSAD 148
A+ ++ F + + I+ A++ S K G +V +KR + E ++
Sbjct: 78 SNAMRQMQSFPFYDKP---MRIQYAKTKSDIVAK-ADGTFVPREKRRRHE---EKGKKKK 130
Query: 149 GDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQ--------- 199
DT++ + A G + TT P S+ PY GGV+
Sbjct: 131 DQHDTNQVGV--GLTPAYGGAYGTT-------------PPLSQIPYLGGVKSMVPEAPAP 175
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
P + LFI NL T L+ Y GF ++M + G +AF ++ + Q+++AM
Sbjct: 176 PNNILFIQNLPNETTTMMLQMLFQQYAGFKEVRMVETKPG--IAFVEYGDEMQSTVAMHA 233
Query: 259 LQDSTLPSSDRGGMHIEYAR 278
LQ L + M I YA+
Sbjct: 234 LQGFKL---QQNSMLITYAK 250
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 12/100 (12%)
Query: 10 YLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKY 69
YL + P P PP N LF+ LP++ + LF++ GF ++
Sbjct: 161 YLGGVKSMVPEAPAPPN---------NILFIQNLPNETTTMMLQMLFQQYAGFKEVRMVE 211
Query: 70 TGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLH 109
T G +AF + + + A+H L G K S + +
Sbjct: 212 TKPG---IAFVEYGDEMQSTVAMHALQGFKLQQNSMLITY 248
>gi|328853728|gb|EGG02865.1| cell wall integrity protein scw1 [Melampsora larici-populina 98AG31]
Length = 1119
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 215 EDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHI 274
ED L++ GF R++ G P+ F +F VE A AME L L GG+ +
Sbjct: 978 EDRLRKLFGKAEGFKRFSFRSKAGQPMCFVEFVNVEAAKKAMENLYGDRLDGLVPGGIRL 1037
Query: 275 EYARSKM 281
++R+ +
Sbjct: 1038 AFSRNAL 1044
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLK 68
I+T+FV G P+D+ RE N+F PGF+ LK
Sbjct: 436 ISTIFVVGFPEDMDEREFQNMFMFSPGFEAATLK 469
>gi|427199356|gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra]
Length = 233
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 14/103 (13%)
Query: 19 PPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRG 73
P VP PP + +TLFV GLP + RE+ ++FR G+ +L ++ G
Sbjct: 124 PEVPLPP-------DASSTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRHPGGD 176
Query: 74 NQVVAFATFVNHQTAVAALHELNGVKFDP--QSGSVLHIELAR 114
V+ F F++ A A+ L G KFD + L ++ AR
Sbjct: 177 PLVLCFVDFLSPAHAATAMDALQGYKFDEHDRDSVSLRLQFAR 219
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-----GGMP--VAFADFEEVEQASI 254
STLF+ L NCT E+ + G+ +++ ++ GG P + F DF A+
Sbjct: 134 STLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLVLCFVDFLSPAHAAT 193
Query: 255 AMEGLQDSTLPSSDRG--GMHIEYAR 278
AM+ LQ DR + +++AR
Sbjct: 194 AMDALQGYKFDEHDRDSVSLRLQFAR 219
>gi|326495566|dbj|BAJ85879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 479
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQD 261
+T+F+ L PN +ED+LKQT S Y + +K+ G F F + + A A++GL
Sbjct: 348 TTVFVGGLDPNVSEDDLKQTFSQYGEISSVKIPV--GKQCGFVQFLQRKNAEDALQGLNG 405
Query: 262 STL 264
ST+
Sbjct: 406 STI 408
>gi|402226337|gb|EJU06397.1| hypothetical protein DACRYDRAFT_92417 [Dacryopinax sp. DJM-731 SS1]
Length = 1156
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
I+T+FV G PDD++ RE N+F PGF+ LK + +A AA++
Sbjct: 332 ISTIFVVGFPDDMQEREFQNMFTFSPGFEAATLKIPNKDLTSYGPGALAPGSSAAAAVNV 391
Query: 95 LNGVKF 100
L F
Sbjct: 392 LRQAGF 397
>gi|363818125|ref|NP_001242627.1| uncharacterized protein LOC100800440 [Glycine max]
gi|255644702|gb|ACU22853.1| unknown [Glycine max]
Length = 230
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-----RARGGMP--VAFADFEEVEQASI 254
STLF+ L PNCT E+ + G+ +++ R GG P + F DF A+
Sbjct: 131 STLFVEGLPPNCTRREVAHIFPPFVGYKEVRLVSKESRQPGGDPLVLCFVDFLSPAHAAT 190
Query: 255 AMEGLQDSTLPSSDRGGMHIEY 276
AME LQ DR +++ +
Sbjct: 191 AMEALQGYKFDELDRNSVNLRF 212
>gi|302696611|ref|XP_003037984.1| hypothetical protein SCHCODRAFT_255020 [Schizophyllum commune H4-8]
gi|300111681|gb|EFJ03082.1| hypothetical protein SCHCODRAFT_255020 [Schizophyllum commune H4-8]
Length = 845
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 200 PCSTLFIANLGPNCT-------EDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQA 252
P +TL++ NL + T ED LK + PG+ L R + P+ F +FE+V A
Sbjct: 626 PINTLYVGNLPSSVTGHPPEHLEDSLKALFAAQPGYRRLCFRQKSNGPMCFVEFEDVSFA 685
Query: 253 SIAMEGLQDSTLPSSDRG-GMHIEYARSKM 281
+ A+ L TL + G+ + Y+++ +
Sbjct: 686 TKALNDLYGHTLDGLVKAPGIRLSYSKNPL 715
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 23 PPPYHHQQ---QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLK 68
PPP QQ Q I+T+FV G PDD++ RE N+F GF+ LK
Sbjct: 173 PPPTGQQQGPVQHEEISTIFVVGFPDDMQEREFQNMFTFSSGFEAATLK 221
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 75 QVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSG 126
Q++ FA F + A++A L G + D + GSVL E+A+ N KR G G
Sbjct: 294 QIIGFAKFRTREEAISARDALQGRRVDMEKGSVLKAEMAKKNLHTKRGVGIG 345
>gi|224128458|ref|XP_002320337.1| predicted protein [Populus trichocarpa]
gi|222861110|gb|EEE98652.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 110/261 (42%), Gaps = 51/261 (19%)
Query: 37 TLFVSGLPDDVRAREI----HNLF----RRKPGFDFCQLKYTGRGNQVVAFATFVNHQTA 88
T++++ L + ++ E+ H +F + F LK+ G+ A+ F + Q+A
Sbjct: 2 TIYINNLNEKIKIDELKTSLHAVFSQFGKILEILAFKTLKHKGQ-----AWVIFEDVQSA 56
Query: 89 VAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSAD 148
A+ ++ F + + I+ A++ S K G +V +KR + E
Sbjct: 57 SNAIRQMQSFPFYDKP---MRIQYAKTKSDIIAK-ADGTFVPREKRRRHE------EKGK 106
Query: 149 GDSDTDEASPV-RNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQ-------- 199
D +A+ V + A G + TT P + PY GGV+
Sbjct: 107 KKKDQHDANQVGVGLTPAYGGAYGTT-------------PSLLQIPYPGGVKSMVPEAPA 153
Query: 200 -PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAME 257
P + LFI NL T L+ YPGF ++M A+ G +AF ++ + Q++ AM
Sbjct: 154 PPNNILFIQNLPNETTPMMLQMLFQQYPGFKEVRMVEAKPG--IAFVEYGDEMQSTGAMH 211
Query: 258 GLQDSTLPSSDRGGMHIEYAR 278
GLQ + + M I YA+
Sbjct: 212 GLQGFKILQQN--SMLITYAK 230
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
N LF+ LP++ + LF++ PGF ++ G +AF + + + A+H L
Sbjct: 157 NILFIQNLPNETTPMMLQMLFQQYPGFKEVRMVEAKPG---IAFVEYGDEMQSTGAMHGL 213
Query: 96 NGVKFDPQSGSVL 108
G K Q+ ++
Sbjct: 214 QGFKILQQNSMLI 226
>gi|242091796|ref|XP_002436388.1| hypothetical protein SORBIDRAFT_10g001660 [Sorghum bicolor]
gi|241914611|gb|EER87755.1| hypothetical protein SORBIDRAFT_10g001660 [Sorghum bicolor]
Length = 266
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 16/105 (15%)
Query: 17 PPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTG 71
P PP+PP + NTL++ G+P RE+ ++FR GF +L K+ G
Sbjct: 154 PEPPLPP---------DASNTLYIEGIPTGCTRREVSHIFRPFVGFREVRLVNKEPKHPG 204
Query: 72 RGNQVVAFATFVNHQTAVAALHELNGVKFDP--QSGSVLHIELAR 114
V+ F F + A+ L G KFD ++ L ++ AR
Sbjct: 205 GDPIVLCFVDFAEPTQSAIAMEALQGYKFDEHDRNSPNLRLQFAR 249
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-----GGMPV--AFADFEEVEQASI 254
+TL+I + CT E+ + GF +++ + GG P+ F DF E Q++I
Sbjct: 164 NTLYIEGIPTGCTRREVSHIFRPFVGFREVRLVNKEPKHPGGDPIVLCFVDFAEPTQSAI 223
Query: 255 AMEGLQDSTLPSSDRGG--MHIEYAR 278
AME LQ DR + +++AR
Sbjct: 224 AMEALQGYKFDEHDRNSPNLRLQFAR 249
>gi|255543210|ref|XP_002512668.1| RNA-binding protein, putative [Ricinus communis]
gi|223548629|gb|EEF50120.1| RNA-binding protein, putative [Ricinus communis]
Length = 443
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 14/134 (10%)
Query: 140 NVQESSSADGDSDTDEASPVRNIDSADKG-------DFVTTQSERATDSGNAVAPINSEK 192
N +S+ D + D S V +D D G DF S +G++ I E
Sbjct: 161 NTIQSNGRDDVEELDFFSSVGGLDLGDDGSTPQNDTDFAGGISNGQPGTGSSNGSIAGEH 220
Query: 193 PYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNML--KMRARGGMPVAFADFEEVE 250
PY G QP TLF+ N+ N + EL+ Y L + RG + +++ D +
Sbjct: 221 PY--GEQPSRTLFVRNINSNVEDSELRALFEQYGDIRSLYTTCKHRGFVMISYYD---IR 275
Query: 251 QASIAMEGLQDSTL 264
A+ A E LQD+ L
Sbjct: 276 AANNAKEALQDTPL 289
>gi|47028317|gb|AAT09091.1| small nuclear ribonucleoprotein [Bigelowiella natans]
Length = 227
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 178 ATDSGNAVAPINSEKPYEGGVQP-CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR 236
AT G + +++P E P LF NL P T+ L+ Y GF ++R
Sbjct: 128 ATAKGEGAPAMETDEPEEEDSSPPNKILFARNLPPQATKKMLETLFKQYDGFK--EVRLV 185
Query: 237 GGMP-VAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYAR 278
G P +AF +F + +++++A EGLQ+ + S + M + +A+
Sbjct: 186 DGKPDIAFIEFNDAQESALAKEGLQNFKITSQN--AMKLTFAK 226
>gi|115479619|ref|NP_001063403.1| Os09g0462700 [Oryza sativa Japonica Group]
gi|113631636|dbj|BAF25317.1| Os09g0462700, partial [Oryza sativa Japonica Group]
Length = 441
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQD 261
+T+F+ L PN +ED+L+QT S Y + +K+ G F F + + A A++GL
Sbjct: 310 TTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPV--GKQCGFVQFVQRKNAEDALQGLNG 367
Query: 262 STL 264
ST+
Sbjct: 368 STI 370
>gi|326512082|dbj|BAJ96022.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 233
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 193 PYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQ 251
P E P + LF+ NL T L+ YPGF ++M A+ G +AF ++E+ Q
Sbjct: 150 PQEPAAPPNNILFLQNLPDQTTSVMLQILFQQYPGFREVRMIEAKPG--IAFVEYEDENQ 207
Query: 252 ASIAMEGLQDSTLPSSDRGGMHIEYAR 278
+ +AME LQ + S M I YA+
Sbjct: 208 SMVAMEALQGFKI--SPENPMAISYAK 232
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 13/89 (14%)
Query: 16 PPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQ 75
PP P PP N LF+ LPD + + LF++ PGF ++ G
Sbjct: 149 PPQEPAAPPN----------NILFLQNLPDQTTSVMLQILFQQYPGFREVRMIEAKPG-- 196
Query: 76 VVAFATFVNHQTAVAALHELNGVKFDPQS 104
+AF + + ++ A+ L G K P++
Sbjct: 197 -IAFVEYEDENQSMVAMEALQGFKISPEN 224
>gi|294868584|ref|XP_002765593.1| U1 small nuclear ribonucleoprotein A, putative [Perkinsus marinus
ATCC 50983]
gi|239865672|gb|EEQ98310.1| U1 small nuclear ribonucleoprotein A, putative [Perkinsus marinus
ATCC 50983]
Length = 400
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
P TLF+ NL P CT ++L YPGF ++ A V F DF QA++A
Sbjct: 326 PNKTLFVENLPPRCTPEKLTAVFKSYPGFEGTRVIAE--RQVGFIDFSSEFQATMAKNAR 383
Query: 260 QDSTLPSSDRGGMHIEYAR 278
D T+ + + I YAR
Sbjct: 384 GDYTM---EGQLVKISYAR 399
>gi|224066731|ref|XP_002302187.1| predicted protein [Populus trichocarpa]
gi|222843913|gb|EEE81460.1| predicted protein [Populus trichocarpa]
Length = 250
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
NTL+V G P D RE+ ++FR G+ +L + G ++ F FVN + A
Sbjct: 151 NTLYVEGFPPDCSRREVAHIFRPFVGYKEVRLVSKEARQRGGDPIILCFVDFVNPECAAT 210
Query: 91 ALHELNGVKFDPQSGSVLHIEL 112
A+ L G K D ++ L
Sbjct: 211 AMSALQGYKVDEHDPDSRYLRL 232
>gi|294911645|ref|XP_002778029.1| U1 small nuclear ribonucleoprotein A, putative [Perkinsus marinus
ATCC 50983]
gi|239886150|gb|EER09824.1| U1 small nuclear ribonucleoprotein A, putative [Perkinsus marinus
ATCC 50983]
Length = 418
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
P TLF+ NL P CT ++L YPGF ++ A V F DF QA++A
Sbjct: 344 PNKTLFVENLPPRCTPEKLTAVFKSYPGFEGTRVIAE--RQVGFIDFSSEFQATMAKNAR 401
Query: 260 QDSTLPSSDRGGMHIEYAR 278
D T+ + + I YAR
Sbjct: 402 GDYTM---EGQLVKISYAR 417
>gi|302785932|ref|XP_002974737.1| hypothetical protein SELMODRAFT_59352 [Selaginella moellendorffii]
gi|300157632|gb|EFJ24257.1| hypothetical protein SELMODRAFT_59352 [Selaginella moellendorffii]
Length = 92
Score = 43.9 bits (102), Expect = 0.073, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL------KYTGRGNQVVAFATFVNHQTAV 89
+TLFV GLP D RE ++FR GF +L + TG V+ F F++ + A
Sbjct: 7 STLFVDGLPSDCTRREAAHIFRPFIGFKEVRLVHKDAKRATGE-KLVLCFVEFMDAKCAA 65
Query: 90 AALHELNGVKF---DPQSGSVLHIELAR 114
AL L G KF DP S VL + AR
Sbjct: 66 TALEALQGYKFDENDPDS-YVLRLTFAR 92
>gi|123436029|ref|XP_001309092.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121890803|gb|EAX96162.1| hypothetical protein TVAG_270500 [Trichomonas vaginalis G3]
Length = 689
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVV-AFATFVNHQTAV 89
+ N T++VS LP + IH +FR C+LK G + + AF TF NH+ A
Sbjct: 7 ESNNKTTIYVSDLPLETTQDFIHQIFRDYGNITQCELKPRKPGAKSIGAFVTFENHEQAS 66
Query: 90 AALHELNGVKFDPQSGSVLHIELARSN 116
A+ E N ++ + SVL I+ N
Sbjct: 67 KAIEECNYMRIN---DSVLRIQWQMIN 90
>gi|84995232|ref|XP_952338.1| U1/2 small nuclear ribonucleoprotein [Theileria annulata strain
Ankara]
gi|65302499|emb|CAI74606.1| U1/2 small nuclear ribonucleoprotein, putative [Theileria annulata]
Length = 206
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 85/232 (36%), Gaps = 66/232 (28%)
Query: 37 TLFVSGLPD----DVRAREIHNLFR-RKPGFDFCQLKY-TGRGNQVVAFATFVNHQTAVA 90
TL+V L D DV + ++ LF D K T RG AF F +A A
Sbjct: 15 TLYVYNLDDQIHIDVLKKLVYELFVPYGIIVDIVARKTKTLRGQ---AFVIFSEISSATA 71
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGD 150
AL LNG K VL IE A++ S K KP
Sbjct: 72 ALKGLNGRKI---LNKVLKIEYAKNRSYKTLKP--------------------------- 101
Query: 151 SDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYE---GGVQPCSTLFIA 207
S + A++G F PI S+ P E G +LF+
Sbjct: 102 ------SDYYKMSKANRGKF---------------KPI-SDFPDELRSSGTDESHSLFVQ 139
Query: 208 NLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
N+ + + + L+ YPGF R G VAF D+ QA IA+EGL
Sbjct: 140 NIPHDMSRESLELLFKQYPGFR--GCRFIEGRFVAFVDYSMASQAEIALEGL 189
>gi|328872428|gb|EGG20795.1| hypothetical protein DFA_00660 [Dictyostelium fasciculatum]
Length = 458
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 47 VRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAAL---HELNGVKFDPQ 103
V ++ LF R PG ++C LK N+ FA +VN+ T AAL +ELNG+K+
Sbjct: 349 VTQENLYKLFSRYPGMEYCDLKKDKTTNKSKGFA-YVNYSTPQAALLAKNELNGIKY--P 405
Query: 104 SGSVLHIELA 113
SG L + A
Sbjct: 406 SGYSLKVVFA 415
>gi|294942132|ref|XP_002783392.1| U1 snRNP protein, putative [Perkinsus marinus ATCC 50983]
gi|239895847|gb|EER15188.1| U1 snRNP protein, putative [Perkinsus marinus ATCC 50983]
Length = 325
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
P TLF+ NL P CT ++L YPGF ++ A V F DF QA++A
Sbjct: 251 PNKTLFVENLPPRCTPEKLTAVFKSYPGFEGTRVIAE--RQVGFIDFSSEFQATMAKNAR 308
Query: 260 QDSTLPSSDRGGMHIEYAR 278
D T+ + I YAR
Sbjct: 309 GDYTMEGQL---VKISYAR 324
>gi|390601674|gb|EIN11068.1| hypothetical protein PUNSTDRAFT_51626 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 802
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 200 PCSTLFIANLGPNCT---------EDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVE 250
P +TL++ NL + T ED L+ S PGF L R + P+ F +FE+V
Sbjct: 587 PINTLYVGNLPASPTQAGYPSSHLEDGLRDLFSQQPGFRKLCYRQKSNGPMCFVEFEDVS 646
Query: 251 QASIAMEGLQDSTLPSSDR-GGMHIEYARSKM 281
A+ A+ L +T+ + GG+ + Y+++ +
Sbjct: 647 YATKALNDLYGNTVNGLVKAGGIRLSYSKNPL 678
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
I+T+FV G PDD++ RE N+F PGF+ LK + ++ A+ + V
Sbjct: 97 ISTIFVVGFPDDMQEREFQNMFTFSPGFEAATLKIPNK--ELTAYGSGV 143
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 75 QVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPG 124
Q++ FA F A+AA L G + D + G+VL E+A+ N KR G
Sbjct: 207 QIIGFAKFSTRSEALAARDVLQGRRVDAEKGAVLKAEMAKKNLHTKRGVG 256
>gi|297842455|ref|XP_002889109.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297334950|gb|EFH65368.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 240
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
NTL+V GLP + RE+ ++FR G+ +L K+ V+ F F N A
Sbjct: 143 NTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDSKHRNGDPIVLCFVDFTNPACAAT 202
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGS 125
AL L G + D + L S RKPGS
Sbjct: 203 ALSALQGYRMDENESDSKFLRLQFS-----RKPGS 232
>gi|70933887|ref|XP_738251.1| small nuclear ribonucleoprotein (snRNP) [Plasmodium chabaudi
chabaudi]
gi|56514315|emb|CAH82541.1| small nuclear ribonucleoprotein (snRNP), putative [Plasmodium
chabaudi chabaudi]
Length = 107
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 176 ERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRA 235
E+ + N + S YE V TLF+ NL ++ L+ + YPGF+ ++R
Sbjct: 10 EKLEGTYNPIKNYKSANNYENKVNQF-TLFVQNLPDEINKNALEILFNQYPGFS--EVRY 66
Query: 236 RGGMPVAFADFEEVEQASIAMEGLQ 260
G VAF DF + +AM GLQ
Sbjct: 67 IPGRNVAFIDFNSYQNGEVAMNGLQ 91
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 32 DNGIN--TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT-GRGNQVVAFATFVNHQTA 88
+N +N TLFV LPD++ + LF + PG F +++Y GR VAF F ++Q
Sbjct: 29 ENKVNQFTLFVQNLPDEINKNALEILFNQYPG--FSEVRYIPGRN---VAFIDFNSYQNG 83
Query: 89 VAALHELNGVKFDPQ 103
A++ L K P+
Sbjct: 84 EVAMNGLQSFKITPE 98
>gi|281212109|gb|EFA86270.1| hypothetical protein PPL_00832 [Polysphondylium pallidum PN500]
Length = 480
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 52 IHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAAL---HELNGVKFDP 102
++ LF R PG ++C LK N+ FA +VN+ T AAL +ELNG+K+ P
Sbjct: 375 LYKLFSRYPGMEYCDLKKDKVSNKSKGFA-YVNYSTPQAALLAKNELNGIKYPP 427
>gi|215765810|dbj|BAG87507.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 345
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQD 261
+T+F+ L PN +ED+L+QT S Y + +K+ G F F + + A A++GL
Sbjct: 214 TTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPV--GKQCGFVQFVQRKNAEDALQGLNG 271
Query: 262 STL 264
ST+
Sbjct: 272 STI 274
>gi|392592942|gb|EIW82268.1| hypothetical protein CONPUDRAFT_81796 [Coniophora puteana
RWD-64-598 SS2]
Length = 926
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 75 QVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSG 126
Q++ FA F Q A+ A L G + D + G++L E+A+ N KR PG+G
Sbjct: 425 QIIGFAKFRTRQEALEARDVLQGRRVDIEKGAILKAEMAKKNLHTKRGPGNG 476
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLK 68
P + QQ+ I+T+FV G P+D++ RE N+F GF+ LK
Sbjct: 281 PAGNLQQEE-ISTIFVVGFPEDMQEREFQNMFTFSAGFEAATLK 323
>gi|50725189|dbj|BAD33940.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|51535291|dbj|BAD38554.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
Length = 316
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQD 261
+T+F+ L PN +ED+L+QT S Y + +K+ G F F + + A A++GL
Sbjct: 185 TTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPV--GKQCGFVQFVQRKNAEDALQGLNG 242
Query: 262 STL 264
ST+
Sbjct: 243 STI 245
>gi|118485733|gb|ABK94716.1| unknown [Populus trichocarpa]
Length = 254
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 110/261 (42%), Gaps = 51/261 (19%)
Query: 37 TLFVSGLPDDVRAREI----HNLFRR----KPGFDFCQLKYTGRGNQVVAFATFVNHQTA 88
T++++ L + ++ E+ H +F + F LK+ G+ A+ F + Q+A
Sbjct: 25 TIYINNLNEKIKIDELKTSLHAVFSQFGKILEILAFKTLKHKGQ-----AWVIFEDVQSA 79
Query: 89 VAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSAD 148
A+ ++ F + + I+ A++ S K G +V +KR + E
Sbjct: 80 SNAIRQMQSFPFYDKP---MRIQYAKTKSDIIAK-ADGTFVPREKRRRHE------EKGK 129
Query: 149 GDSDTDEASPV-RNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQ-------- 199
D +A+ V + A G + TT P + PY GGV+
Sbjct: 130 KKKDQHDANQVGVGLTPAYGGAYGTT-------------PSLLQIPYPGGVKSMVPEAPA 176
Query: 200 -PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAME 257
P + LFI NL T L+ YPGF ++M A+ G +AF ++ + Q++ AM
Sbjct: 177 PPNNILFIQNLPNETTPMMLQMLFQQYPGFKEVRMVEAKPG--IAFVEYGDEMQSTGAMH 234
Query: 258 GLQDSTLPSSDRGGMHIEYAR 278
GLQ + + M I YA+
Sbjct: 235 GLQGFKILQQN--SMLITYAK 253
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 12/90 (13%)
Query: 19 PPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVA 78
P P PP N LF+ LP++ + LF++ PGF ++ G +A
Sbjct: 172 PEAPAPPN---------NILFIQNLPNETTPMMLQMLFQQYPGFKEVRMVEAKPG---IA 219
Query: 79 FATFVNHQTAVAALHELNGVKFDPQSGSVL 108
F + + + A+H L G K Q+ ++
Sbjct: 220 FVEYGDEMQSTGAMHGLQGFKILQQNSMLI 249
>gi|222641726|gb|EEE69858.1| hypothetical protein OsJ_29658 [Oryza sativa Japonica Group]
Length = 310
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQD 261
+T+F+ L PN +ED+L+QT S Y + +K+ G F F + + A A++GL
Sbjct: 179 TTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPV--GKQCGFVQFVQRKNAEDALQGLNG 236
Query: 262 STL 264
ST+
Sbjct: 237 STI 239
>gi|449439191|ref|XP_004137370.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' 2-like [Cucumis
sativus]
gi|449520549|ref|XP_004167296.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' 2-like [Cucumis
sativus]
Length = 231
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 179 TDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARG 237
T++G + A P P + LFI NL + L+ YPGF ++M A+
Sbjct: 134 TENGGSNATFRHANPSATEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKP 193
Query: 238 GMPVAFADFEEVEQASIAMEGLQ 260
G +AF +FE+ Q+S+AM+ LQ
Sbjct: 194 G--IAFVEFEDDVQSSMAMQALQ 214
>gi|194707750|gb|ACF87959.1| unknown [Zea mays]
gi|414885794|tpg|DAA61808.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 433
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 195 EGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASI 254
+GG +T+F+ L PN +E++L+QT S Y + +K+ G F F + + A
Sbjct: 292 DGGDLTNTTVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPI--GKQCGFVQFAQRKNAED 349
Query: 255 AMEGLQDSTL 264
A++GL ST+
Sbjct: 350 ALQGLNGSTI 359
>gi|224075455|ref|XP_002304641.1| predicted protein [Populus trichocarpa]
gi|222842073|gb|EEE79620.1| predicted protein [Populus trichocarpa]
Length = 976
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 52/132 (39%), Gaps = 12/132 (9%)
Query: 140 NVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVA-----PINSEKPY 194
N+ S D D D S V +D D G SE + N + E PY
Sbjct: 213 NINHPSGGDDMEDLDFFSSVGGMDLGDDGSVAQIDSEFHGGASNGQLGACNLSVAGEHPY 272
Query: 195 EGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNML--KMRARGGMPVAFADFEEVEQA 252
G P TLF+ N+ N E EL+ Y L + RG + +++ D + A
Sbjct: 273 --GEHPSRTLFVRNINSNVEESELRAIFEQYGDIRTLYTACKHRGFVMISYYD---IRAA 327
Query: 253 SIAMEGLQDSTL 264
AM+ LQ+ L
Sbjct: 328 KNAMKALQNRPL 339
>gi|82914978|ref|XP_728920.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23485600|gb|EAA20485.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 189
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 176 ERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRA 235
E+ + N + S YE + TLF+ NL ++ L+ + YPGF+ ++R
Sbjct: 95 EKLDGTYNPIKNYKSANNYENKINQF-TLFVQNLPDEINKNALEILFNQYPGFS--EVRY 151
Query: 236 RGGMPVAFADFEEVEQASIAMEGLQ 260
G VAF DF + +AM GLQ
Sbjct: 152 IPGRNVAFIDFNSYQNGEVAMNGLQ 176
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 32 DNGIN--TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT-GRGNQVVAFATFVNHQTA 88
+N IN TLFV LPD++ + LF + PG F +++Y GR VAF F ++Q
Sbjct: 114 ENKINQFTLFVQNLPDEINKNALEILFNQYPG--FSEVRYIPGRN---VAFIDFNSYQNG 168
Query: 89 VAALHELNGVKFDP 102
A++ L P
Sbjct: 169 EVAMNGLQSFXITP 182
>gi|388521817|gb|AFK48970.1| unknown [Lotus japonicus]
Length = 229
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
N LFV LP D RE+ +LFR G+ ++ + +G V+ F F + + A+
Sbjct: 130 NVLFVDVLPRDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFDDSKCALT 189
Query: 91 ALHELNGVKFDPQS--GSVLHIELA 113
A+ L G KFD + L I+ A
Sbjct: 190 AMEALQGYKFDDKKPDSRTLKIQFA 214
>gi|226492692|ref|NP_001144988.1| uncharacterized protein LOC100278143 [Zea mays]
gi|195649537|gb|ACG44236.1| hypothetical protein [Zea mays]
Length = 436
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 195 EGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASI 254
+GG +T+F+ L PN +E++L+QT S Y + +K+ G F F + + A
Sbjct: 295 DGGDLTNTTVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPI--GKQCGFVQFAQRKNAED 352
Query: 255 AMEGLQDSTL 264
A++GL ST+
Sbjct: 353 ALQGLNGSTI 362
>gi|115462171|ref|NP_001054685.1| Os05g0154800 [Oryza sativa Japonica Group]
gi|122169518|sp|Q0DKM4.1|RU1A_ORYSJ RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
protein A
gi|384950745|sp|A2Y0J7.1|RU1A_ORYSI RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
protein A
gi|113578236|dbj|BAF16599.1| Os05g0154800 [Oryza sativa Japonica Group]
gi|125550898|gb|EAY96607.1| hypothetical protein OsI_18512 [Oryza sativa Indica Group]
gi|222630249|gb|EEE62381.1| hypothetical protein OsJ_17170 [Oryza sativa Japonica Group]
Length = 253
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 181 SGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTL-SVYPGF----NMLKMRA 235
SG A + P E G P T++I NL +ELK++L +V+ F ++L +
Sbjct: 2 SGEVAAAVGGGAPEENGAPPNVTIYINNLNEKIKLEELKKSLRAVFSQFGKILDVLAFKT 61
Query: 236 RGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSK 280
A+ FE+V A+ A++ +QD P ++ M I+YA++K
Sbjct: 62 LKHKGQAWVVFEDVASATEALKSMQD--FPFHNK-PMRIQYAKTK 103
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 102/258 (39%), Gaps = 45/258 (17%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFAT-------FVNHQTAV 89
T++++ L + ++ E+ R F Q G+ V+AF T +V +
Sbjct: 24 TIYINNLNEKIKLEELKKSLRAV----FSQF---GKILDVLAFKTLKHKGQAWVVFEDVA 76
Query: 90 AALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADG 149
+A L ++ P + I+ A++ S K G +V ++R + + ++ +
Sbjct: 77 SATEALKSMQDFPFHNKPMRIQYAKTKSDIIAK-ADGTFVPRERRKRNDEKPEKKQKREQ 135
Query: 150 DSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGG--------VQPC 201
D + N G AP S+ P+ G + P
Sbjct: 136 HHDVSQVGLGVNAYPGVYG-----------------APPLSQLPFAGAQKVMMPEIIVPN 178
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEGLQ 260
+ LF+ NL T L+ YPGF ++M A+ G +AF ++ + QA+ AM LQ
Sbjct: 179 NILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAKPG--IAFVEYGDEGQATAAMNHLQ 236
Query: 261 DSTLPSSDRGGMHIEYAR 278
+ ++ M I YA+
Sbjct: 237 GFKITKDNQ--MLISYAK 252
>gi|302820252|ref|XP_002991794.1| hypothetical protein SELMODRAFT_236385 [Selaginella moellendorffii]
gi|300140475|gb|EFJ07198.1| hypothetical protein SELMODRAFT_236385 [Selaginella moellendorffii]
Length = 228
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 196 GGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIA 255
G +P S LFI NL T L+ + YPG ++M G +AF ++ + QA++A
Sbjct: 147 GNQEPNSILFIQNLPDETTGPMLEMLFTRYPGLKDVRM-VDGRPGIAFVEYSDEGQATVA 205
Query: 256 MEGLQDSTLPSSDRGGMHIEYAR 278
+E LQ + ++ M I YA+
Sbjct: 206 LEALQSFKITANH--AMVISYAK 226
>gi|30699215|ref|NP_177820.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|119360107|gb|ABL66782.1| At1g76940 [Arabidopsis thaliana]
gi|332197785|gb|AEE35906.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 233
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
NTL+V GLP + RE+ ++FR G+ +L K+ V+ F F N A
Sbjct: 136 NTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDSKHRNGDPIVLCFVDFTNPACAAT 195
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGS 125
AL L G + D + L S RKPGS
Sbjct: 196 ALSALQGYRMDENESDSKFLRLQFS-----RKPGS 225
>gi|444317322|ref|XP_004179318.1| hypothetical protein TBLA_0B09815 [Tetrapisispora blattae CBS 6284]
gi|387512358|emb|CCH59799.1| hypothetical protein TBLA_0B09815 [Tetrapisispora blattae CBS 6284]
Length = 823
Score = 43.5 bits (101), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 29/95 (30%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM-------------------- 239
PC+TL++ NL + TE EL+Q S PGF L R +
Sbjct: 633 PCNTLYVGNLPLDATEMELRQLFSNQPGFKRLSFRNKNSSSVSTPTSANPMSLSSNSNNN 692
Query: 240 ---------PVAFADFEEVEQASIAMEGLQDSTLP 265
P+ F +FE++ A+ A+ L S LP
Sbjct: 693 NNNNNNNHGPMCFVEFEDISYATRALAELYGSQLP 727
>gi|194697962|gb|ACF83065.1| unknown [Zea mays]
gi|414885795|tpg|DAA61809.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 320
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 195 EGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASI 254
+GG +T+F+ L PN +E++L+QT S Y + +K+ G F F + + A
Sbjct: 179 DGGDLTNTTVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPI--GKQCGFVQFAQRKNAED 236
Query: 255 AMEGLQDSTL 264
A++GL ST+
Sbjct: 237 ALQGLNGSTI 246
>gi|308459677|ref|XP_003092154.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
gi|308254084|gb|EFO98036.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
Length = 336
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELN 96
T++V LP DVR +EI ++F + +K R + AF F + + A A+ +
Sbjct: 5 TVYVGNLPSDVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRACD 64
Query: 97 GVKFDPQSGSVLHIEL 112
G +FD G L +E
Sbjct: 65 GYEFD---GKRLRVEF 77
>gi|308459689|ref|XP_003092160.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
gi|308254090|gb|EFO98042.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
Length = 333
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELN 96
T++V LP DVR +EI ++F + +K R + AF F + + A A+ +
Sbjct: 5 TVYVGNLPSDVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRARD 64
Query: 97 GVKFDPQSGSVLHIEL 112
G +FD G L +E
Sbjct: 65 GYEFD---GKRLRVEF 77
>gi|303286151|ref|XP_003062365.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455882|gb|EEH53184.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 107
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 40/90 (44%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELN 96
TL++ G+P D REI ++FR GF +L + FA F A AAL+ L
Sbjct: 18 TLYIEGVPHDATVREIAHIFRPFDGFQSTRLVKKENVRGPLCFAEFAGADLAFAALNTLQ 77
Query: 97 GVKFDPQSGSVLHIELARSNSRKKRKPGSG 126
G D + + + S+ + PG G
Sbjct: 78 GYVLDRDDPKSPALRIVFAKSKGRVPPGKG 107
>gi|218202287|gb|EEC84714.1| hypothetical protein OsI_31675 [Oryza sativa Indica Group]
Length = 377
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQD 261
+T+F+ L PN +ED+L+QT S Y + +K+ G F F + + A A++GL
Sbjct: 246 TTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPV--GKQCGFVQFVQRKNAEDALQGLNG 303
Query: 262 STL 264
ST+
Sbjct: 304 STI 306
>gi|156086920|ref|XP_001610867.1| hypothetical protein [Babesia bovis T2Bo]
gi|154798120|gb|EDO07299.1| conserved hypothetical protein [Babesia bovis]
Length = 361
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 37 TLFVSGLPDDVRAREIHNLFRR------KPGFDFCQLKYTGRGNQVV---AFATFVNHQT 87
+++++GLPDDV + EI N+FRR P +++ V A TFVN ++
Sbjct: 91 SVYITGLPDDVTSEEIANVFRRAGLIKIDPITTLPKIRMYTDAQGVFKNDARVTFVNKES 150
Query: 88 AVAALHELNGVKFDPQSGSVLHIELARSNSRKK 120
A+ L+ F P V+H+E A N +K+
Sbjct: 151 VDFAIRYLDNYHFRP--DCVIHVEKATYNPQKR 181
>gi|357112644|ref|XP_003558118.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like
[Brachypodium distachyon]
Length = 233
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 193 PYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQ 251
P E P LFI NL T L+ YPGF ++M A+ G +AF +FE+ Q
Sbjct: 150 PQEPPAPPNKILFIQNLPDQTTSMMLQLLFRQYPGFWEVRMIEAKPG--IAFVEFEDESQ 207
Query: 252 ASIAMEGLQDSTLPSSDRGGMHIEYAR 278
+ +AM+ LQ + S M I YA+
Sbjct: 208 SMVAMQALQGFKI--SPENPMAISYAK 232
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 14/89 (15%)
Query: 16 PPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQ 75
P PP PP N I LF+ LPD + + LFR+ PGF ++ G
Sbjct: 150 PQEPPAPP---------NKI--LFIQNLPDQTTSMMLQLLFRQYPGFWEVRMIEAKPG-- 196
Query: 76 VVAFATFVNHQTAVAALHELNGVKFDPQS 104
+AF F + ++ A+ L G K P++
Sbjct: 197 -IAFVEFEDESQSMVAMQALQGFKISPEN 224
>gi|116781380|gb|ABK22075.1| unknown [Picea sitchensis]
Length = 265
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
NTLFV GLP RE ++FR GF +L + G V+ F F N A
Sbjct: 159 NTLFVEGLPPKCTRREAAHIFRPFVGFKEVRLVNKEARNPGGEPLVLCFVDFANPNCAAT 218
Query: 91 ALHELNGVKFD--PQSGSVLHIELAR 114
A+ L G KFD + L ++ AR
Sbjct: 219 AMEALQGYKFDENEKESPSLKLQFAR 244
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-----RARGGMP--VAFADFEEVEQASI 254
+TLF+ L P CT E + GF +++ R GG P + F DF A+
Sbjct: 159 NTLFVEGLPPKCTRREAAHIFRPFVGFKEVRLVNKEARNPGGEPLVLCFVDFANPNCAAT 218
Query: 255 AMEGLQDSTLPSSDRG--GMHIEYAR 278
AME LQ +++ + +++AR
Sbjct: 219 AMEALQGYKFDENEKESPSLKLQFAR 244
>gi|302802087|ref|XP_002982799.1| hypothetical protein SELMODRAFT_117045 [Selaginella moellendorffii]
gi|300149389|gb|EFJ16044.1| hypothetical protein SELMODRAFT_117045 [Selaginella moellendorffii]
Length = 521
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 175 SERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNML--K 232
S + SG+A I E PY G P TLF+ N+ N + EL++ +Y L
Sbjct: 5 SHESLHSGSAHGTIAGEHPY--GEHPSRTLFVRNINSNVEDSELRELFEIYGDIRTLYTA 62
Query: 233 MRARGGMPVAFADFEEVEQASIAMEGLQDSTL 264
+ RG + +++ D + A AM LQ L
Sbjct: 63 CKHRGFVMISYYD---IRSARTAMRVLQGRLL 91
>gi|387914214|gb|AFK10716.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
gi|392878676|gb|AFM88170.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
gi|392884228|gb|AFM90946.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
gi|392884422|gb|AFM91043.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
gi|392884424|gb|AFM91044.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
Length = 226
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 99/247 (40%), Gaps = 34/247 (13%)
Query: 37 TLFVSGLPDDVRA----REIHNLFRRKPGF-DFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
T++++ + D ++ R +++LF + D LK Q AF F +A +
Sbjct: 8 TIYINNINDKIKKDELKRALYSLFSQFGQIVDIVALKTMKMRGQ--AFVIFKELCSATSG 65
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDS 151
L +L G F G + I+ A+++S K K+ K +A QE S+A+
Sbjct: 66 LRQLQGFPF---YGKPMRIQYAKTDSDVTSKMRGTFADKEKKKEKKKAKAQEQSAANKKM 122
Query: 152 DTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGP 211
+ A P T S + T S N P N P LF+ NL
Sbjct: 123 NLGAAQPT------------TANSNQTTSSANQQVPDNP---------PNYILFLTNLPE 161
Query: 212 NCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGG 271
E L + +PGF +++ G +AF +FE QA A + LQ + S
Sbjct: 162 ETNEMMLSMLFNQFPGFKEVRL-VPGRHDIAFVEFENEGQAGAARDALQGFRITPSH--A 218
Query: 272 MHIEYAR 278
M I YA+
Sbjct: 219 MKITYAK 225
>gi|224146679|ref|XP_002326095.1| predicted protein [Populus trichocarpa]
gi|222862970|gb|EEF00477.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 198 VQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAM 256
V P + LFI NL T L+ YPGF ++M A+ G +AF +FE+ Q+S+AM
Sbjct: 155 VPPNNILFIQNLPHETTSMMLQVLFQQYPGFREVRMIEAKPG--IAFVEFEDDVQSSMAM 212
Query: 257 EGLQDSTLPSSDRGGMHIEYAR 278
+ LQ + + + M I YA+
Sbjct: 213 QALQGFKI--TPQNPMAITYAK 232
>gi|355715885|gb|AES05434.1| RNA binding protein with multiple splicing 2 [Mustela putorius
furo]
Length = 155
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 61 GFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKK 120
G++ +K T R Q V F F + A AA + LNG++FDP++ L +E A++N++
Sbjct: 4 GYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKNALNGIRFDPENPQTLRLEFAKANTKMA 61
Query: 121 R 121
+
Sbjct: 62 K 62
>gi|409049565|gb|EKM59042.1| hypothetical protein PHACADRAFT_169505 [Phanerochaete carnosa
HHB-10118-sp]
Length = 578
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 16/103 (15%)
Query: 161 NIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQ 220
NID + + D + RA G+A + P S LF+ NL + TED+L +
Sbjct: 380 NIDKSVEKDQNQVRERRAKAFGDATSA------------PSSVLFVGNLSFDATEDQLWE 427
Query: 221 TLSVYPGFNMLKM--RARGGMPVAFA--DFEEVEQASIAMEGL 259
S Y ++M G P F +FE+VE A A EGL
Sbjct: 428 VFSDYGSVKSVRMPTDRESGRPKGFGYVEFEDVESAKKAHEGL 470
>gi|359493018|ref|XP_002264314.2| PREDICTED: uncharacterized protein LOC100242739 [Vitis vinifera]
Length = 261
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 50/123 (40%), Gaps = 21/123 (17%)
Query: 14 IHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----K 68
I P P PP + +TL+V GLP D RE+ ++FR G+ +L K
Sbjct: 129 IRPSRETAPLPP-------DASSTLYVEGLPPDSTRREVAHIFRPFVGYKEVRLVSKESK 181
Query: 69 YTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIEL---------ARSNSRK 119
+ GR V+ F F + A AL L G K + L + S SR
Sbjct: 182 HRGRDPLVLCFVDFTSPACAATALSALQGYKISEHDRDSAQMRLQFSQYPDPRSGSGSRG 241
Query: 120 KRK 122
KRK
Sbjct: 242 KRK 244
>gi|301104435|ref|XP_002901302.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
gi|262100777|gb|EEY58829.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
Length = 214
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
+FV LP+DVR RE+ + F R ++K+ R AF T+ N Q A A+ +N
Sbjct: 4 VFVGNLPEDVRERELSDKFERYGRITSVRIKFPAR-PPPFAFLTYENEQDASDAVRSMNN 62
Query: 98 VKFDPQSGSVLHIELAR 114
F GS + +E++R
Sbjct: 63 TTF---GGSRIRVEMSR 76
>gi|334183951|ref|NP_001185414.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332197786|gb|AEE35907.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 179
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
NTL+V GLP + RE+ ++FR G+ +L K+ V+ F F N A
Sbjct: 82 NTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDSKHRNGDPIVLCFVDFTNPACAAT 141
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGS 125
AL L G + D + L S RKPGS
Sbjct: 142 ALSALQGYRMDENESDSKFLRLQFS-----RKPGS 171
>gi|299748154|ref|XP_001837498.2| hypothetical protein CC1G_01410 [Coprinopsis cinerea okayama7#130]
gi|298407840|gb|EAU84414.2| hypothetical protein CC1G_01410 [Coprinopsis cinerea okayama7#130]
Length = 935
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 200 PCSTLFIANL---------GPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVE 250
P +TL++ NL + ED ++Q PG+ L R + P+ F +FE+V
Sbjct: 681 PINTLYVGNLPAPSPSIGFSNDQLEDAIRQLFMAQPGYRRLVFRQKNNGPMCFVEFEDVH 740
Query: 251 QASIAMEGLQDSTLPSSDR-GGMHIEYARSKM 281
A+ A+ L TL + GG+ + Y+++ +
Sbjct: 741 FATRALNELYGHTLGGLVKSGGIRLSYSKNPL 772
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 60 PGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRK 119
PG F + R Q++ FA F + + A+ A L G + D + G+VL E+A+ N
Sbjct: 283 PGNHFVGVNLPPR-KQIIGFAKFKSREAALEARDVLQGRRVDIEKGAVLKAEMAKKNLHT 341
Query: 120 KRKPG 124
KR G
Sbjct: 342 KRGVG 346
>gi|296088114|emb|CBI35503.3| unnamed protein product [Vitis vinifera]
Length = 292
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 50/123 (40%), Gaps = 21/123 (17%)
Query: 14 IHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----K 68
I P P PP + +TL+V GLP D RE+ ++FR G+ +L K
Sbjct: 160 IRPSRETAPLPP-------DASSTLYVEGLPPDSTRREVAHIFRPFVGYKEVRLVSKESK 212
Query: 69 YTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIEL---------ARSNSRK 119
+ GR V+ F F + A AL L G K + L + S SR
Sbjct: 213 HRGRDPLVLCFVDFTSPACAATALSALQGYKISEHDRDSAQMRLQFSQYPDPRSGSGSRG 272
Query: 120 KRK 122
KRK
Sbjct: 273 KRK 275
>gi|255553401|ref|XP_002517742.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis]
gi|223543140|gb|EEF44674.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis]
Length = 233
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
P + LFI NL T L+ YPGF ++M A+ G +AF +FE+ Q+S+AM+
Sbjct: 157 PNNILFIQNLPHETTSMMLQVLFQQYPGFREVRMIEAKPG--IAFVEFEDDVQSSMAMQA 214
Query: 259 LQDSTLPSSDRGGMHIEYAR 278
LQ + + + M I YA+
Sbjct: 215 LQSFKI--TPQNPMAITYAK 232
>gi|344281908|ref|XP_003412718.1| PREDICTED: hypothetical protein LOC100663984 [Loxodonta africana]
Length = 640
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L + + ++N+F C++ +G + F F ++A
Sbjct: 525 RKSGVGNVFIKNLGKTIDNKALYNIFSTFGNILSCKVACDEKGPKGYGFVHFQEQESAER 584
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGD 150
A+ +NG+ + + I + R S K+R+ GA+ R T A+V+ D D
Sbjct: 585 AIDVMNGMFLNYRK-----IFVGRFKSHKEREAERGAWA----RQSTSADVK-----DFD 630
Query: 151 SDTDEASPVR 160
DTDE + +R
Sbjct: 631 EDTDEEATLR 640
>gi|356535808|ref|XP_003536435.1| PREDICTED: uncharacterized protein LOC100816230 isoform 1 [Glycine
max]
Length = 251
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 16 PPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYT 70
P P +P PP + +TL+V GLP RE+ ++FR G+ +L K+
Sbjct: 139 PGPETLPLPP-------DASSTLYVEGLPSGSTRREVAHIFRPFVGYREVRLVSKESKHR 191
Query: 71 GRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIEL 112
G ++ F F N A AL L G K D + H+ L
Sbjct: 192 GGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRL 233
>gi|356535810|ref|XP_003536436.1| PREDICTED: uncharacterized protein LOC100816230 isoform 2 [Glycine
max]
Length = 243
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 16 PPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYT 70
P P +P PP + +TL+V GLP RE+ ++FR G+ +L K+
Sbjct: 131 PGPETLPLPP-------DASSTLYVEGLPSGSTRREVAHIFRPFVGYREVRLVSKESKHR 183
Query: 71 GRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIEL 112
G ++ F F N A AL L G K D + H+ L
Sbjct: 184 GGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRL 225
>gi|11527011|gb|AAG36874.1|AF242767_1 SF2 [Caenorhabditis elegans]
Length = 258
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
++V LP DVR +E+ ++F + + +K +GRG AF F +H+ A A+ +G
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRIKYVDIK-SGRG-PAFAFVEFEDHRDAEDAVRARDG 68
Query: 98 VKFDPQSGSVLHIELARS 115
+FD G + +E R
Sbjct: 69 YEFD---GRRIRVEFTRG 83
>gi|255645608|gb|ACU23298.1| unknown [Glycine max]
Length = 242
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 12/102 (11%)
Query: 16 PPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYT 70
P P V PP + +TL+V GLP D RE+ ++FR G+ +L K+
Sbjct: 130 PGPETVSLPP-------DASSTLYVEGLPSDSTRREVAHIFRPFVGYREVRLVSKESKHR 182
Query: 71 GRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIEL 112
G + F F N A A+ L G K D + H+ L
Sbjct: 183 GGDPHYLCFVDFANPACAATAMSALQGYKVDELNPESSHLRL 224
>gi|58262246|ref|XP_568533.1| RNA binding protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134118674|ref|XP_771840.1| hypothetical protein CNBN0220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254444|gb|EAL17193.1| hypothetical protein CNBN0220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230707|gb|AAW47016.1| RNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 285
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 38/241 (15%)
Query: 32 DNGINTLFVSGLPDDVR----AREIHNLFR----RKPGFDFCQLKYTGRGNQVVAFATFV 83
DN TL++ L + VR ++NLF+ +P ++ G+ AF +F
Sbjct: 55 DNACETLYLQNLNEKVRIPVMKETLYNLFKPYRPLQPIIAHHNIRMRGQ-----AFVSFS 109
Query: 84 NHQTAVAALHELNGVKFDPQSGSVLHIELAR--SNSRKKRKPGSGAYVVIDKRTKTEANV 141
+ ++A A ++N P G + I+ A+ S+S KRK + KR E +
Sbjct: 110 DIESANEARKDVNEF---PLYGKSIQIKFAKGLSDSIVKRKGDEKEFEEHTKRRLEEKKL 166
Query: 142 QESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPC 201
+ ++ P+R K A +G A + P E + P
Sbjct: 167 KRKNN-----------PLRQ-----KAQAKLRADTTAGTAGPAAKKQRLQMPDEY-LPPN 209
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-GGMPVAFADFEEVEQASIAMEGLQ 260
S LF+ NL T ++L++ V+PG ++++R +AF +F + A+IA + L
Sbjct: 210 SVLFVQNLPDGTTSEDLREVFEVHPG--LIEIRTIPAKKDIAFVEFADEGAATIAKDALH 267
Query: 261 D 261
+
Sbjct: 268 N 268
>gi|307212325|gb|EFN88129.1| Heterogeneous nuclear ribonucleoprotein Q [Harpegnathos saltator]
Length = 649
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 106/272 (38%), Gaps = 26/272 (9%)
Query: 22 PPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKY--TGRGNQVVAF 79
PPP + G +F +P D+ E+ LF + +L N+ AF
Sbjct: 141 PPPNWEGPTPGTGCE-VFCGKIPKDMYEDELIPLFEKCGKIWDLRLMMDPMSGSNRGYAF 199
Query: 80 ATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSR---KKRKPGSGAYVVIDKRTK 136
TF N + A A+ EL+ + P G L + ++ N R G ++D+ K
Sbjct: 200 ITFTNREAAQQAVRELDNHEIKP--GKSLKVNISVPNLRLFVGNIPKSKGKEEILDEFGK 257
Query: 137 TEANVQES---SSADGDSDTDEASPVRNIDSADKGDFVTTQ--SERATDSGNAVAPINS- 190
A + E SS D D + +S + + R G + +
Sbjct: 258 LTAGLTEVIIYSSPD-DKKKNRGFCFLEYESHKAASLAKRRLSTGRIKVWGCDIIVDWAD 316
Query: 191 --EKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEE 248
E+P E + L++ NL +C+E++LK++ Y R + AF FE+
Sbjct: 317 PQEEPDEQTMSKVRVLYVRNLTQDCSEEKLKESFEQYGKIE----RVKKIKDYAFIHFED 372
Query: 249 VEQASIAMEGLQDSTLPSSDRGGMHIEYARSK 280
+ A AM + L + GG HIE + +K
Sbjct: 373 RDNAVRAM-----NELNGKEMGGSHIEVSLAK 399
>gi|361128647|gb|EHL00577.1| putative Cell wall integrity protein scw1 [Glarea lozoyensis 74030]
Length = 524
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
PC+ L+I NL E +L++ + PGF ++M+ P F F +V+ A A+
Sbjct: 351 PCNNLYIRNLPAEPDEGDLREFFAKQPGFEGIRMKL--NEPECFVQFSDVQSAMEALRRS 408
Query: 260 QDSTLPSSDRGGMHIEYARS 279
D D+ G+ + +AR+
Sbjct: 409 DDHRFSPEDKWGIMVGFARN 428
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
N L++ LP + ++ F ++PGF+ ++K N+ F F + Q+A+ AL
Sbjct: 353 NNLYIRNLPAEPDEGDLREFFAKQPGFEGIRMKL----NEPECFVQFSDVQSAMEALRRS 408
Query: 96 NGVKFDPQSGSVLHIELARS 115
+ +F P+ + + AR+
Sbjct: 409 DDHRFSPEDKWGIMVGFARN 428
>gi|363807818|ref|NP_001241926.1| uncharacterized protein LOC100786188 [Glycine max]
gi|255640386|gb|ACU20480.1| unknown [Glycine max]
Length = 230
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-----RARGGMP--VAFADFEEVEQASI 254
STLF+ L NCT E+ + G+ +++ R GG P + F DF A+
Sbjct: 131 STLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRQPGGDPLVLCFVDFMSPAHAAT 190
Query: 255 AMEGLQDSTLPSSDRGGMHIEY 276
AME LQ DR +++ +
Sbjct: 191 AMEALQGYKFDELDRNSVNLRF 212
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 33 NGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQT 87
+ +TLFV GLP + RE+ ++FR G+ +L + G V+ F F++
Sbjct: 128 DATSTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRQPGGDPLVLCFVDFMSPAH 187
Query: 88 AVAALHELNGVKFD 101
A A+ L G KFD
Sbjct: 188 AATAMEALQGYKFD 201
>gi|26450151|dbj|BAC42194.1| unknown protein [Arabidopsis thaliana]
Length = 156
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
NTL+V GLP + RE+ ++FR G+ +L K+ V+ F F N A
Sbjct: 59 NTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDSKHRNGDPIVLCFVDFTNPACAAT 118
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGS 125
AL L G + D + L S RKPGS
Sbjct: 119 ALSALQGYRMDENESDSKFLRLQFS-----RKPGS 148
>gi|242045360|ref|XP_002460551.1| hypothetical protein SORBIDRAFT_02g030530 [Sorghum bicolor]
gi|241923928|gb|EER97072.1| hypothetical protein SORBIDRAFT_02g030530 [Sorghum bicolor]
Length = 122
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 33 NGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAAL 92
+ +T++V GLP + RE+ ++FR+ GF +L G N+ + F F A A+
Sbjct: 30 DATSTIYVEGLPTNCTRREVAHIFRQYMGFLGMRLVNKG-SNRHLCFVDFATPAQAFLAM 88
Query: 93 HELNGVKFDPQS--GSVLHIELARS 115
L G +FD Q +L ++ + S
Sbjct: 89 RTLQGYRFDEQDPHSRILKLQFSHS 113
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 182 GNAVAP-INSEKPYEGGVQP------CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMR 234
G + P ++ PY G +P ST+++ L NCT E+ Y GF +++
Sbjct: 6 GQSCGPNLHDGFPYFGAPEPSLPRDATSTIYVEGLPTNCTRREVAHIFRQYMGFLGMRLV 65
Query: 235 ARGG-MPVAFADFEEVEQASIAMEGLQDSTLPSSD 268
+G + F DF QA +AM LQ D
Sbjct: 66 NKGSNRHLCFVDFATPAQAFLAMRTLQGYRFDEQD 100
>gi|395329839|gb|EJF62224.1| hypothetical protein DICSQDRAFT_104543 [Dichomitus squalens
LYAD-421 SS1]
Length = 1099
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 200 PCSTLFIANLGPNCT----------EDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEV 249
P +TL++ NL P T ED L++ G+ L R + P+ F +FE V
Sbjct: 854 PINTLYVGNL-PTSTSPGGHTLSFLEDRLRELFLKQAGYRKLCFRQKSNGPMCFVEFESV 912
Query: 250 EQASIAMEGLQDSTLPSSDR-GGMHIEYARSKM 281
E A+ A+ L TL R GG+ + Y+++ +
Sbjct: 913 EFATKALNDLYGDTLNGLVRNGGIRLSYSKNPL 945
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 75 QVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSG 126
Q++ FA F A+ A L G + D + G+VL E+A+ N KR PG G
Sbjct: 471 QIIGFAKFRTRAEALEARDVLQGRRVDVEKGAVLKAEMAKKNLHTKRGPGVG 522
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLK 68
P P Q++ I+T+FV G PDD+ RE N+F GF+ LK
Sbjct: 348 PAPSSQAQEE--ISTIFVVGFPDDMSEREFQNMFTFSVGFEAATLK 391
>gi|225561960|gb|EEH10240.1| nucleic acid-binding protein [Ajellomyces capsulatus G186AR]
Length = 325
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 189 NSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRA--RGGMPVAFA-- 244
NS P +P TLFI NL T+ EL P + +++ R G P FA
Sbjct: 195 NSAAPRTRASEPTKTLFIGNLSFEMTDRELNDLFRDIPNVDDVRVSVDKRTGRPRGFAHA 254
Query: 245 DFEEVEQASIAMEGLQD 261
DF +VE A AME L++
Sbjct: 255 DFLDVESAKAAMEILKE 271
>gi|358345383|ref|XP_003636759.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|23304837|emb|CAD48198.1| RNA-binding protein [Medicago truncatula]
gi|355502694|gb|AES83897.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 261
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 19/118 (16%)
Query: 4 PPYDPYYLPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFD 63
PP DP H P P + PP + TL++ GLP D RE+ ++FR G+
Sbjct: 130 PPMDPVSR---HGPEPALLPP--------DASPTLYIEGLPSDCTRREVAHIFRPFVGYR 178
Query: 64 FCQL---KYTGRGN-QVVAFATFVNHQTAVAALHELNGVKFD---PQSGSVLHIELAR 114
+L + RG+ ++ F F N A AL L G K D P+S S L ++ +R
Sbjct: 179 EVRLVSKEAKHRGDPLILCFVDFANPACAATALSALQGYKVDEINPES-SHLRLQFSR 235
>gi|340501460|gb|EGR28246.1| hypothetical protein IMG5_180460 [Ichthyophthirius multifiliis]
Length = 861
Score = 42.4 bits (98), Expect = 0.23, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 27 HHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQ 86
++Q+ I T+F+ LP +EI+NLF + ++ +G + +A+ F+N +
Sbjct: 502 NNQENIQHIQTVFIKNLPTHYSEQEINNLFENQQNIK--SIRIVKKGKKGLAYIDFLNQE 559
Query: 87 TAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRK 122
A A + N +K D +L++ L+ KK +
Sbjct: 560 EAEKACKQANNLKID--DNHILYVALSAPPKEKKEE 593
>gi|162462145|ref|NP_001105534.1| meg5 protein [Zea mays]
gi|47078331|gb|AAT09814.1| MEG5 [Zea mays]
Length = 163
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-----RARGGMP--VAFADFEEVEQASI 254
STL+I L NCT E+ + GF +++ R GG P + F DF+ QA+I
Sbjct: 38 STLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDNPAQATI 97
Query: 255 AMEGLQ 260
A+E LQ
Sbjct: 98 ALEALQ 103
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 17 PPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTG 71
P PP+PP + +TL++ GLP + RE+ ++FR GF +L ++ G
Sbjct: 28 PEPPLPP---------DASSTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPG 78
Query: 72 RGNQVVAFATFVNHQTAVAALHELNG 97
V+ F F N A AL L G
Sbjct: 79 GDPHVLCFVDFDNPAQATIALEALQG 104
>gi|393911204|gb|EJD76208.1| HnRNP-R, variant [Loa loa]
Length = 696
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 94/246 (38%), Gaps = 30/246 (12%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLK---YTGRGNQVVAFATFVNHQTAVAALHE 94
+++ +P +V + LF +L TGR N+ AF T+ + +A A +
Sbjct: 282 IYIGKIPKEVYEDTLITLFEDMGKIWDLRLMMDPLTGR-NRGYAFLTYCDKTSAYEAAKK 340
Query: 95 LNGVKFDPQSGSVLHIELARSNSRK------KRKPGSGAYVVIDKRTKTEANVQESSSAD 148
+G + P G L + ++ +N+R K K + T+ + SS D
Sbjct: 341 FDGYEIMP--GKNLKVNVSVANTRLFIGNIPKSKSKEEILAEFKEHTEGVTDCIIYSSPD 398
Query: 149 GDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINS----------EKPYEGGV 198
E+ R D D T + + P NS E+P E +
Sbjct: 399 AG----ESRKNRGFCFLDFCDHKTASDAKRKIHAGKLRPWNSDLVVDWAEQQEEPDEETM 454
Query: 199 QPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEG 258
L++ NL TE++LK+ S Y + RA+ AF F E E A AME
Sbjct: 455 AKVKVLYVRNLKEAVTEEQLKEMFSAYGEVD----RAKKIRDYAFIHFMEREPAIKAMEA 510
Query: 259 LQDSTL 264
L + L
Sbjct: 511 LNGTEL 516
>gi|45190951|ref|NP_985205.1| AER349Cp [Ashbya gossypii ATCC 10895]
gi|44984019|gb|AAS53029.1| AER349Cp [Ashbya gossypii ATCC 10895]
gi|374108430|gb|AEY97337.1| FAER349Cp [Ashbya gossypii FDAG1]
Length = 218
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 36 NTLFVSGLPDDVRAREIHNLFR---RKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAAL 92
NT+ VSG P + RAR++ F + D ++ ++ AF F H+ V A+
Sbjct: 5 NTVHVSGFPAETRARDMAPDFEAVGKIVRIDIPPMRPFQ--DRPFAFVKFETHEECVRAV 62
Query: 93 HELNGVKFDPQSGSVLHIELARSNSRKKRKPGSG 126
EL+G F P + H+++ARS P +G
Sbjct: 63 EELDGRPFTPDTRFTYHVQVARSRPYAPYAPRNG 96
>gi|328789990|ref|XP_392307.4| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Apis
mellifera]
Length = 664
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 105/272 (38%), Gaps = 26/272 (9%)
Query: 22 PPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKY--TGRGNQVVAF 79
PPP + G +F +P D+ E+ LF + +L N+ AF
Sbjct: 150 PPPNWEGPTPGTGCE-VFCGKIPKDMYEDELIPLFEKCGKIWDLRLMMDPMAGCNRGYAF 208
Query: 80 ATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSR---KKRKPGSGAYVVIDKRTK 136
TF N + A A+ EL+ + P G L + ++ N R G ++++ K
Sbjct: 209 ITFTNREAAQQAVRELDNHEIKP--GKNLKVNISVPNLRLFVGNIPKSKGKEEILEEFGK 266
Query: 137 TEANVQES---SSADGDSDTDEASPVRNIDSADKGDFVTTQ--SERATDSGNAVAPINS- 190
A + E SS D D + +S + + R G + +
Sbjct: 267 LTAGLTEVIIYSSPD-DKKKNRGFCFLEYESHKAASLAKRRLSTGRIKVWGCDIIVDWAD 325
Query: 191 --EKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEE 248
E+P E + L++ NL +C+E++LK++ Y R + AF FEE
Sbjct: 326 PQEEPDEQTMSKVRVLYVKNLTQDCSEEKLKESFEQYGNIE----RVKKIKDYAFVHFEE 381
Query: 249 VEQASIAMEGLQDSTLPSSDRGGMHIEYARSK 280
+ A AM L + GG HIE + +K
Sbjct: 382 RDNAVKAMNELNGKEI-----GGSHIEVSLAK 408
>gi|401882121|gb|EJT46394.1| hypothetical protein A1Q1_05041 [Trichosporon asahii var. asahii
CBS 2479]
Length = 192
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 12/87 (13%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGF-------NMLKMRARGGMPVAFADFEEVEQA 252
P TLF+ NL + EL+Q L Y F +++ + GG AF FEE A
Sbjct: 6 PSPTLFVGNLETKTKKPELRQQL--YALFTPYGRVIDIVAKKHDGGRGQAFIVFEEQAAA 63
Query: 253 SIAMEGLQDSTLPSSDRGGMHIEYARS 279
+ A+ GL D+ + D MHI YA++
Sbjct: 64 TAALRGLNDTQFYNRD---MHIAYAKN 87
>gi|389584533|dbj|GAB67265.1| RNA binding function, partial [Plasmodium cynomolgi strain B]
Length = 384
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 32 DNGINTLFVSGLPDDVRAREIHNLFRR-KPGFDFCQLKYTGRGNQ--VVAFATFVNHQTA 88
D G +++V GLP EI LF R F ++ + NQ + F F NH
Sbjct: 127 DKGTYSIYVGGLPKGTTKEEIETLFSRFYSSICFVKMIKNTQKNQNRIYCFIHFFNHDEC 186
Query: 89 VAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPG 124
+ AL E++G F I++++SN K K G
Sbjct: 187 IRALTEMDGHDFKG-----CKIKVSKSNGAKIGKGG 217
>gi|401887165|gb|EJT51169.1| RNA binding protein [Trichosporon asahii var. asahii CBS 2479]
Length = 269
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 33/208 (15%)
Query: 78 AFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKT 137
AF +F + TA A ++N P G + I+ A++ S VI+K+
Sbjct: 87 AFVSFRDKATAALAQRDVNEF---PLYGKPIIIDFAKTRSD----------AVIEKQDGE 133
Query: 138 EANVQESSSADGDSDTDEASPV---RNIDSADKGDFVTTQSERATDSGNAVAPINSEKPY 194
EA D T + V RNI GD D+ P ++KP
Sbjct: 134 EALEAWKKERLADKKTKRKTNVIRARNIAKHKAGD----------DTSAPSGPGAAKKPK 183
Query: 195 ----EGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVE 250
+ + P + LF+ NL T+D+L++ YPG ++ A +AF ++ +
Sbjct: 184 LQMPDEYLPPNNVLFVQNLPEGTTQDDLREVFEQYPGLVEIRTIA-AKKDIAFVEYADET 242
Query: 251 QASIAMEGLQDSTLPSSDRGGMHIEYAR 278
+++A + L + + + M + +AR
Sbjct: 243 ASAVAKDALHNFKIDGETK--MKVTFAR 268
>gi|260783658|ref|XP_002586890.1| hypothetical protein BRAFLDRAFT_241504 [Branchiostoma floridae]
gi|229272019|gb|EEN42901.1| hypothetical protein BRAFLDRAFT_241504 [Branchiostoma floridae]
Length = 359
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 18 PPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTGRGN 74
PP VPP P + G+N + V ++H LF PG +F L + TG+ +
Sbjct: 149 PPLVPPAPQANDVTVLGVNQWLYIIVDSTVSEHQLHALFDLIPGLEFVDLQKDRSTGQ-S 207
Query: 75 QVVAFATFVNHQTAVAALHELNGVKFDP 102
+ A+A + +A+ A +LNG ++ P
Sbjct: 208 RGCAYARYTTAASAIYAREKLNGFEYPP 235
>gi|358059557|dbj|GAA94714.1| hypothetical protein E5Q_01367 [Mixia osmundae IAM 14324]
Length = 1103
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 200 PCSTLFIANL----GPNCTEDELKQTLSVY----PGFNMLKMRARGGMPVAFADFEEVEQ 251
PC+TL++ L + +L++TL ++ GF L R + P+ F +FE +
Sbjct: 902 PCNTLYLGGLPSLAASASSIRQLEETLRLHFQRLQGFRRLCFRQKSNGPMCFVEFESTDA 961
Query: 252 ASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
A+ AM + +TL R G+ + ++++ +
Sbjct: 962 ATRAMNEMNGNTLGGLVRSGIRVSFSKNPL 991
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLK 68
++T+FV G PDD++ RE N+F PGF+ LK
Sbjct: 549 VSTIFVVGFPDDMQEREFQNMFIFCPGFEAATLK 582
>gi|169616941|ref|XP_001801885.1| hypothetical protein SNOG_11646 [Phaeosphaeria nodorum SN15]
gi|160703294|gb|EAT80690.2| hypothetical protein SNOG_11646 [Phaeosphaeria nodorum SN15]
Length = 1254
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 50/223 (22%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGN-QVVAFATFVNHQTAVAALHELN 96
++V L V+ REI++ F R + +L G GN + F F ++A AA+ E+N
Sbjct: 983 VYVWHLNFKVKEREINDAFSRFGTIERIKLPLKGHGNNRGYCFVNFKTKESADAAVAEMN 1042
Query: 97 GVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTDEA 156
G F G LH+E+A +D+ E+ + S+ + DSD EA
Sbjct: 1043 GKNF---WGLDLHVEIA-----------------VDR---AESKPKTRSTLEADSDVREA 1079
Query: 157 SPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTED 216
+P + + D + KP EG + S F+ N+ P+ D
Sbjct: 1080 TPGKTEATQDA----------------------TSKP-EGTIGSRSIAFL-NI-PDTVPD 1114
Query: 217 ELKQTLSVYPGFNMLKMRAR-GGMPVAFADFEEVEQASIAMEG 258
+ L GF + + + GG V F E +A IA++G
Sbjct: 1115 VRIKPLVEPFGFRKITLEPKHGGAIVEFNTVEGAGKAEIALQG 1157
>gi|383847619|ref|XP_003699450.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like
[Megachile rotundata]
Length = 664
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 26/272 (9%)
Query: 22 PPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKY--TGRGNQVVAF 79
PPP + G +F +P D+ E+ LF + +L N+ AF
Sbjct: 150 PPPNWEGPTPGTGCE-VFCGKIPKDMYEDELIPLFEKCGKIWDLRLMMDPMAGCNRGYAF 208
Query: 80 ATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSR---KKRKPGSGAYVVIDKRTK 136
TF N + A A+ EL+ + P G L + ++ N R G ++++ K
Sbjct: 209 ITFTNREAAQQAVKELDNHEIKP--GKNLKVNISVPNLRLFVGNIPKSKGKEEILEEFGK 266
Query: 137 TEANVQES---SSADGDSDTDEASPVRNIDSADKGDF----VTTQSERATDSGNAVAPIN 189
A + E SS D D + +S ++T + V +
Sbjct: 267 LTAGLTEVIIYSSPD-DKKKNRGFCFLEYESHKAASLAKRRLSTGRIKVWGCDIIVDWAD 325
Query: 190 -SEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEE 248
E+P E + L++ NL +C+E++LK+ Y R + AF FEE
Sbjct: 326 PQEEPDEQTMSKVRVLYVKNLTQDCSEEKLKEVFEQYGNIE----RVKKIKDYAFVHFEE 381
Query: 249 VEQASIAMEGLQDSTLPSSDRGGMHIEYARSK 280
+ A AM L + GG HIE + +K
Sbjct: 382 RDNAVKAMNELNGKEI-----GGSHIEVSLAK 408
>gi|350409228|ref|XP_003488661.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Bombus
impatiens]
Length = 664
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 105/272 (38%), Gaps = 26/272 (9%)
Query: 22 PPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKY--TGRGNQVVAF 79
PPP + G +F +P D+ E+ LF + +L N+ AF
Sbjct: 150 PPPNWEGPTPGTGCE-VFCGKIPKDMYEDELIPLFEKCGKIWDLRLMMDPMAGCNRGYAF 208
Query: 80 ATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSR---KKRKPGSGAYVVIDKRTK 136
TF N + A A+ EL+ + P G L + ++ N R G ++++ K
Sbjct: 209 ITFTNREAAQQAVRELDNHEIKP--GKNLKVNISVPNLRLFVGNIPKSKGKEEILEEFGK 266
Query: 137 TEANVQES---SSADGDSDTDEASPVRNIDSADKGDF----VTTQSERATDSGNAVAPIN 189
A + E SS D D + +S ++T + V +
Sbjct: 267 LTAGLTEVIIYSSPD-DKKKNRGFCFLEYESHKAASLAKRRLSTGRIKVWGCDIIVDWAD 325
Query: 190 -SEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEE 248
E+P E + L++ NL +C+E++LK++ Y R + AF FEE
Sbjct: 326 PQEEPDEQTMSKVRVLYVKNLTQDCSEEKLKESFEQYGNIE----RVKKIKDYAFVHFEE 381
Query: 249 VEQASIAMEGLQDSTLPSSDRGGMHIEYARSK 280
+ A AM L + GG HIE + +K
Sbjct: 382 RDNAVKAMNELNGKEI-----GGSHIEVSLAK 408
>gi|330822061|ref|XP_003291619.1| hypothetical protein DICPUDRAFT_8590 [Dictyostelium purpureum]
gi|325078184|gb|EGC31849.1| hypothetical protein DICPUDRAFT_8590 [Dictyostelium purpureum]
Length = 312
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 47 VRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAAL---HELNGVKFDPQ 103
+ ++ LF R PG ++C LK + FA +VN+ T AAL +ELNG+K+ P
Sbjct: 245 ISQENLYRLFSRYPGMEYCDLKKDKNNGKSKGFA-YVNYSTPAAALMAKNELNGIKYPP- 302
Query: 104 SGSVLHIELA 113
G L + A
Sbjct: 303 -GHTLKVVFA 311
>gi|145536596|ref|XP_001454020.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421764|emb|CAK86623.1| unnamed protein product [Paramecium tetraurelia]
Length = 228
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMR-ARGGMPVAFADFEEVEQASIAMEGLQ 260
+ L I +L P TE L + YPG++++K+ ARG +AF +++ +QA++A++GL
Sbjct: 155 NVLLIESLPPFVTEIMLSELFRQYPGYSLIKLIPARG---LAFVEYQNDDQATVALKGL- 210
Query: 261 DSTLPSSDRGGMHIEYARS 279
S + + ++YA+
Sbjct: 211 -SNFKITPECQLKVKYAKK 228
>gi|389583186|dbj|GAB65922.1| U2 small nuclear ribonucleoprotein B'' [Plasmodium cynomolgi strain
B]
Length = 262
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 190 SEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEV 249
SE Y TLFI NL ++ L+ + YPGF ++R G VAF DF
Sbjct: 178 SETGYGSSTANVFTLFIQNLPNEINKNALEILFNQYPGF--CEVRHIPGRNVAFVDFSSY 235
Query: 250 EQASIAMEGLQ 260
+ +AM GLQ
Sbjct: 236 QNGEVAMNGLQ 246
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT-GRGNQVVAFATFVNHQTAVAALHEL 95
TLF+ LP+++ + LF + PG FC++++ GR VAF F ++Q A++ L
Sbjct: 191 TLFIQNLPNEINKNALEILFNQYPG--FCEVRHIPGRN---VAFVDFSSYQNGEVAMNGL 245
Query: 96 NGVKFDPQ 103
K PQ
Sbjct: 246 QSFKVTPQ 253
>gi|224034387|gb|ACN36269.1| unknown [Zea mays]
gi|413944623|gb|AFW77272.1| hypothetical protein ZEAMMB73_456532 [Zea mays]
Length = 254
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 37/224 (16%)
Query: 64 FCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKP 123
F LK+ G+ A+ F + +A AL + G F ++ + I+ A++ S K
Sbjct: 58 FKTLKHKGQ-----AWVVFEDVASATEALKRMQGFPFYDKT---MRIQYAKTKSDIIAK- 108
Query: 124 GSGAYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGN 183
G +V ++R +T+ ++ + D AS + +A G +
Sbjct: 109 ADGTFVPRERRKRTDEKSEKKQKREHHHDAG-ASQIGMGVTAYPGVYG------------ 155
Query: 184 AVAPINSEKPYEGG--------VQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-R 234
AP ++ P GG + P + LF+ NL T L+ YPGF ++M
Sbjct: 156 --APQLTQIPIAGGQRVMMPEIIVPNNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMIE 213
Query: 235 ARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYAR 278
A+ G +AF ++ + QA+ AM LQ + ++ M I YA+
Sbjct: 214 AKPG--IAFVEYGDETQATAAMNNLQSFKITKENQ--MVITYAK 253
>gi|357164465|ref|XP_003580062.1| PREDICTED: HIV Tat-specific factor 1 homolog isoform 1
[Brachypodium distachyon]
Length = 489
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 17/114 (14%)
Query: 13 PIHPPPPPVPPPPYHHQQQDNGINT-LFVSGLPDDVRAREIHNLFR-----------RKP 60
P+ PP + D +NT ++++GLPDDV A EI +F RKP
Sbjct: 224 PVEKKEANKPPESWF----DLKVNTHVYITGLPDDVTAEEIVEVFSKCGIIKEDPETRKP 279
Query: 61 GFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELAR 114
K TGR + A T++ + A+ L+G F P +++ + +A+
Sbjct: 280 RVKIYTDKETGR-KKGDALVTYLKEPSVPLAIQLLDGTSFRPGGKTLMSVSVAK 332
>gi|224135091|ref|XP_002321981.1| predicted protein [Populus trichocarpa]
gi|222868977|gb|EEF06108.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
+TLFV GLP D RE+ ++FR G+ +L ++ G V+ F F++ A
Sbjct: 121 STLFVEGLPSDCTRREVSHIFRPFVGYKEVRLVSKESRHPGGDPLVLCFVDFLSPAHAAT 180
Query: 91 ALHELNGVKFDPQSGSVLHIEL 112
++ L G +FD + + L
Sbjct: 181 SMDALQGYRFDEHDRDSVDLRL 202
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-----GGMP--VAFADFEEVEQASI 254
STLF+ L +CT E+ + G+ +++ ++ GG P + F DF A+
Sbjct: 121 STLFVEGLPSDCTRREVSHIFRPFVGYKEVRLVSKESRHPGGDPLVLCFVDFLSPAHAAT 180
Query: 255 AMEGLQDSTLPSSDRGG--MHIEYAR 278
+M+ LQ DR + +++AR
Sbjct: 181 SMDALQGYRFDEHDRDSVDLRLQFAR 206
>gi|47230708|emb|CAF99901.1| unnamed protein product [Tetraodon nigroviridis]
Length = 573
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 53 HNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIEL 112
+N+ + G++ +K T + Q V F TF + A AA + LNG++FDP++ L +E
Sbjct: 421 NNVSIEEEGYEGSLIKLTSK--QPVGFVTFDSRSGAEAAKNALNGIRFDPENPQTLRLEF 478
Query: 113 ARSNSR 118
A++N++
Sbjct: 479 AKANTK 484
>gi|357158812|ref|XP_003578248.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 431
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQD 261
+T+F+ L PN +ED+L+Q+ S Y + +K+ G F F + + A A++GL
Sbjct: 299 TTVFVGGLDPNVSEDDLRQSFSQYGEISSVKIPV--GKQCGFVQFLQRKNAEDALQGLNG 356
Query: 262 STL 264
ST+
Sbjct: 357 STI 359
>gi|157821519|ref|NP_001102890.1| RNA binding motif protein 41 [Rattus norvegicus]
gi|149022081|gb|EDL78975.1| rCG26849, isoform CRA_a [Rattus norvegicus]
Length = 413
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 36 NTLFVSGLPDDVRAREIHNLF-----RRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
L++ L V+ R++ +LF ++ P F + RG AF TF N A
Sbjct: 309 KVLYLKNLSPRVKERDLISLFARFQEKKGPLIQFQMMTGRMRGQ---AFITFPNKDIAWQ 365
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRK 119
ALH++NG K G +L IE A+S ++
Sbjct: 366 ALHQINGYKL---YGKILVIEFAKSRKQQ 391
>gi|240275573|gb|EER39087.1| nucleic acid-binding protein [Ajellomyces capsulatus H143]
Length = 332
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 189 NSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRA--RGGMPVAFA-- 244
NS P +P TLFI NL T+ EL P + +++ R G P FA
Sbjct: 202 NSAAPRTRASEPTKTLFIGNLSFEMTDRELNDLFRDIPNVDDVRVSVDKRTGRPRGFAHA 261
Query: 245 DFEEVEQASIAMEGLQD 261
DF +VE A AME L++
Sbjct: 262 DFLDVESAKAAMEILKE 278
>gi|154283681|ref|XP_001542636.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410816|gb|EDN06204.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 318
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 189 NSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRA--RGGMPVAFA-- 244
NS P +P TLFI NL T+ EL P + +++ R G P FA
Sbjct: 188 NSAAPRTRSSEPTKTLFIGNLSFEMTDRELNDLFRDIPNVDDVRVSVDKRTGRPRGFAHA 247
Query: 245 DFEEVEQASIAMEGLQD 261
DF +VE A AME L++
Sbjct: 248 DFLDVESAKAAMEILKE 264
>gi|145544152|ref|XP_001457761.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425579|emb|CAK90364.1| unnamed protein product [Paramecium tetraurelia]
Length = 228
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 46/78 (58%), Gaps = 6/78 (7%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMR-ARGGMPVAFADFEEVEQASIAMEGLQ 260
+ L I +L P TE L + YPG++++K+ ARG +AF +++ +QA++A++GL
Sbjct: 155 NVLLIESLPPFVTEIMLSELFRQYPGYSLIKLIPARG---LAFVEYQNDDQATVALKGL- 210
Query: 261 DSTLPSSDRGGMHIEYAR 278
S + + ++YA+
Sbjct: 211 -SNFKITPECQLKVKYAK 227
>gi|229595477|ref|XP_001017208.3| hypothetical protein TTHERM_00194550 [Tetrahymena thermophila]
gi|225565995|gb|EAR96963.3| hypothetical protein TTHERM_00194550 [Tetrahymena thermophila
SB210]
Length = 616
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 34 GINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL--KYTGRGNQVVAFATFVNHQTAV-- 89
N+L+V G+P D RE+ ++FR PGF +L K T G + + FV+ ++A+
Sbjct: 453 ATNSLYVDGVPIDSNEREVSHIFRPFPGFQAVRLIRKRTQAGREF--YFCFVDFESALQS 510
Query: 90 -AALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGA 127
AL L G +FD + L I A + K++ G
Sbjct: 511 TIALRTLQGYRFDKKDTQGLKISYANEPHQPKKQEQFGV 549
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 198 VQPCSTLFIANLGPNCTEDELKQTLSVYPGFN---MLKMRARGG--MPVAFADFEEVEQA 252
V+ ++L++ + + E E+ +PGF +++ R + G F DFE Q+
Sbjct: 451 VEATNSLYVDGVPIDSNEREVSHIFRPFPGFQAVRLIRKRTQAGREFYFCFVDFESALQS 510
Query: 253 SIAMEGLQDSTLPSSDRGGMHIEYA 277
+IA+ LQ D G+ I YA
Sbjct: 511 TIALRTLQGYRFDKKDTQGLKISYA 535
>gi|399218844|emb|CCF75731.1| unnamed protein product [Babesia microti strain RI]
Length = 199
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 199 QPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEG 258
Q T+F+ NL P+ T+ ++ S YPG+ + G VAF D+E+ QA + ++G
Sbjct: 123 QDVHTIFVENLPPDTTQRAVEILFSQYPGYVGCRFILDRG--VAFVDYEKSVQAEVTIQG 180
Query: 259 LQ 260
LQ
Sbjct: 181 LQ 182
>gi|406694958|gb|EKC98273.1| hypothetical protein A1Q2_07287 [Trichosporon asahii var. asahii
CBS 8904]
Length = 865
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 87/211 (41%), Gaps = 38/211 (18%)
Query: 78 AFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAY------VVI 131
AF +F + TA A ++N + ++ RS++ +++ G A +
Sbjct: 682 AFVSFRDKATAALAQRDVNEFPLYGKPIQIIDFAKTRSDAVIEKQDGEEALEAWKKERLA 741
Query: 132 DKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSE 191
DK+TK + NV + RNI GD D+ P ++
Sbjct: 742 DKKTKRKTNVIRA---------------RNIAKHKAGD----------DTSAPSGPGAAK 776
Query: 192 KPY----EGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFE 247
KP + + P + LF+ NL T+D+L++ YPG ++ A +AF ++
Sbjct: 777 KPKLQMPDEYLPPNNVLFVQNLPEGTTQDDLREVFEQYPGLVEIRTIA-AKKDIAFVEYA 835
Query: 248 EVEQASIAMEGLQDSTLPSSDRGGMHIEYAR 278
+ +++A + L + + + M + +AR
Sbjct: 836 DETASAVAKDALHNFKIDGETK--MKVTFAR 864
>gi|146183888|ref|XP_001027266.2| U1 small nuclear ribonucleoprotein A [Tetrahymena thermophila]
gi|146143436|gb|EAS07024.2| U1 small nuclear ribonucleoprotein A [Tetrahymena thermophila
SB210]
Length = 247
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 93/233 (39%), Gaps = 41/233 (17%)
Query: 36 NTLFVSGLP-----DDVRAREIHNLFRRKPGFDFCQLK--YTGRGNQVVAFATFVNHQTA 88
NT++++ L DD++ +E+ LF + K RG V F Q A
Sbjct: 32 NTIYINNLNERISIDDLK-QELFKLFSEYGSILEIKAKKNIRMRGQAFVVFEQIACAQKA 90
Query: 89 VAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSAD 148
+ AL+ N G LH+ A++ S K GAY + A+ E ++
Sbjct: 91 IEALNRKNFY------GKALHLNFAKTKSDAILK-REGAYAPRQPKIFNAADFIEERQSN 143
Query: 149 GDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGV-QPCSTLFIA 207
Q E + +A A + ++ + + QP TLF+
Sbjct: 144 KK-----------------------QKENLKNKESATAKLAAQPLVQNTIIQPHHTLFLE 180
Query: 208 NLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQ 260
NL N + +K + +PGF +++ + VAF ++E+ +A+ A+ LQ
Sbjct: 181 NLPINSNTEVIKAFFATFPGFKEVRLVPQKR--VAFVEYEDENKATAALASLQ 231
>gi|255083026|ref|XP_002504499.1| predicted protein [Micromonas sp. RCC299]
gi|226519767|gb|ACO65757.1| predicted protein [Micromonas sp. RCC299]
Length = 224
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 14/93 (15%)
Query: 196 GGVQPCSTLFIANLGPNCTEDELKQTL-SVYPGFNML-------KMRARGGMPVAFADFE 247
G + PC+T+++ NL +DEL ++L +++ F + + RG V FAD
Sbjct: 2 GDIPPCATIYVNNLNEKTKKDELVKSLQAIFGQFGKIIDIVASKSYKLRGQAWVVFAD-- 59
Query: 248 EVEQASIAMEGLQDSTLPSSDRGGMHIEYARSK 280
V A+ AM +Q+ P D+ M I YA++K
Sbjct: 60 -VASATAAMRAMQE--FPFYDK-PMRIAYAKTK 88
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 13/141 (9%)
Query: 122 KPGSGAYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDS-ADKGDFVTTQSERATD 180
KP AY +TK++A + + D + E R +S A + + ++ER
Sbjct: 78 KPMRIAYA----KTKSDATAKAEGTFDPSARDPEMRAKRKAESQAAEKESQAAKAERDAA 133
Query: 181 SGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGM 239
SG + ++ + P LF+ L T L +PGF ++M A+ G
Sbjct: 134 SG-----VTAKVRTDPSAPPNEILFVQGLPGATTAAMLSMLFQQFPGFKEVRMVEAKPG- 187
Query: 240 PVAFADFEEVEQASIAMEGLQ 260
+AF +FE QAS+A+ GLQ
Sbjct: 188 -IAFVEFETDAQASVALSGLQ 207
>gi|221054978|ref|XP_002258628.1| Small nuclear ribonucleoprotein (SnRNP) [Plasmodium knowlesi strain
H]
gi|193808697|emb|CAQ39400.1| Small nuclear ribonucleoprotein (SnRNP),putative [Plasmodium
knowlesi strain H]
Length = 192
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT-GRGNQVVAFATFVNHQTAVAALHEL 95
TLFV LP+++ + LF + PG FC++++ GR VAF F ++Q A++ L
Sbjct: 121 TLFVQNLPNEINKNALEILFNQYPG--FCEVRHIPGRN---VAFVDFSSYQNGEVAMNGL 175
Query: 96 NGVKFDPQ 103
K PQ
Sbjct: 176 QNFKVTPQ 183
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQD 261
TLF+ NL ++ L+ + YPGF ++R G VAF DF + +AM GLQ+
Sbjct: 121 TLFVQNLPNEINKNALEILFNQYPGF--CEVRHIPGRNVAFVDFSSYQNGEVAMNGLQN 177
>gi|1669555|dbj|BAA12229.1| RBP-MS/type 5 [Homo sapiens]
Length = 98
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 61 GFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSR 118
G++ +K T + Q V F +F + A AA + LNG++FDP+ L +E A++N++
Sbjct: 4 GYEGSLIKLTSK--QPVGFVSFDSRSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTK 59
>gi|328868243|gb|EGG16621.1| hypothetical protein DFA_07599 [Dictyostelium fasciculatum]
Length = 903
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 21/125 (16%)
Query: 159 VRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDEL 218
++N + K D TT + D N + G PC TLF+ N+ E+E+
Sbjct: 192 IQNEVTNQKQDNHTTTASTENDFNNDIE--------SGDNTPCRTLFVRNILIGSDEEEV 243
Query: 219 KQTLSVYPGFNMLKMR----ARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHI 274
+S++ + ++ + +RG +A+ D + E A I EGL+ P +HI
Sbjct: 244 ---VSIFEQYGEIRRKFSQISRGICFIAYYDIRDAETAKIKAEGLKIRNRP------IHI 294
Query: 275 EYARS 279
+++S
Sbjct: 295 SFSKS 299
>gi|357164467|ref|XP_003580063.1| PREDICTED: HIV Tat-specific factor 1 homolog isoform 2
[Brachypodium distachyon]
Length = 477
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 32 DNGINT-LFVSGLPDDVRAREIHNLFR-----------RKPGFDFCQLKYTGRGNQVVAF 79
D +NT ++++GLPDDV A EI +F RKP K TGR + A
Sbjct: 227 DLKVNTHVYITGLPDDVTAEEIVEVFSKCGIIKEDPETRKPRVKIYTDKETGR-KKGDAL 285
Query: 80 ATFVNHQTAVAALHELNGVKFDPQSGSVLHIELAR 114
T++ + A+ L+G F P +++ + +A+
Sbjct: 286 VTYLKEPSVPLAIQLLDGTSFRPGGKTLMSVSVAK 320
>gi|388858649|emb|CCF48487.1| related to Transformer-2 protein homolog [Ustilago hordei]
Length = 346
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 32 DNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT--GRGNQVVAFATFVNHQTAV 89
+N N L VSGL + R++ + F + + Q+ Y R + AF TFV + A
Sbjct: 72 NNPGNNLHVSGLSNRTTDRDLEDAFGKYGAIERAQVMYDPHSREPRGFAFVTFVKAEDAE 131
Query: 90 AALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTK 136
AA+ +NG +F G + ++ AR + R P G Y K+ +
Sbjct: 132 AAITAMNGTEF---LGRKITVDKARRG--RARTPTPGRYFGPPKKGR 173
>gi|432936836|ref|XP_004082303.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Oryzias
latipes]
Length = 542
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 109/280 (38%), Gaps = 40/280 (14%)
Query: 22 PPPPYHHQQQDNGINT-LFVSGLPDDVRAREIHNLFRRK-PGFDFCQLKYTGRG-NQVVA 78
PPP H I T +FV +P D+ E+ LF R P +D + G N+ A
Sbjct: 147 PPPESAHSGGQPTIGTEIFVGKIPRDLFEDELVPLFERAGPIWDLRLMMDPLSGLNRGYA 206
Query: 79 FATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTE 138
F TF + + A A+ N + P G + + ++ +N+R +V ++KT+
Sbjct: 207 FVTFCSKEAAQQAVKLCNNSEIRP--GKHIGVCISVANNR--------LFVGSIPKSKTK 256
Query: 139 ANVQE--SSSADGDSDT------DEASPVRNIDSADKGDFVTT-QSERATDSGNA----- 184
+ E S +G +D D+ R + D T Q+ R SG
Sbjct: 257 EQIIEEFSKVTEGLNDVILYHQPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGN 316
Query: 185 VAPINSEKPYEG----GVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMP 240
V + P E + LF+ NL TE+ L++T S + R +
Sbjct: 317 VVTVEWADPIEDPDPEVMAKVKVLFVRNLASAVTEELLEKTFSQFGKLE----RVKKLKD 372
Query: 241 VAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSK 280
AF FEE + A A+ L D G HIE +K
Sbjct: 373 YAFIHFEERDSAVKAL-----GDLNGKDLEGEHIEIVFAK 407
>gi|388504624|gb|AFK40378.1| unknown [Medicago truncatula]
Length = 228
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
NTLFV GLP + RE+ ++FR G+ +L + G ++ F FV+ A
Sbjct: 130 NTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRQPGGDPLLLCFVDFVSPAHAAT 189
Query: 91 ALHELNGVKFDP--QSGSVLHIELARSNSR 118
A+ L+G KFD ++ L + AR+ R
Sbjct: 190 AMDALHGYKFDELDRNSVNLRFQFARNPGR 219
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-----RARGGMP--VAFADFEEVEQASI 254
+TLF+ L NCT E+ + G+ +++ R GG P + F DF A+
Sbjct: 130 NTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRQPGGDPLLLCFVDFVSPAHAAT 189
Query: 255 AMEGLQDSTLPSSDRGGMHIEY 276
AM+ L DR +++ +
Sbjct: 190 AMDALHGYKFDELDRNSVNLRF 211
>gi|393911205|gb|EJD76209.1| HnRNP-R [Loa loa]
Length = 729
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 100/267 (37%), Gaps = 33/267 (12%)
Query: 17 PPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLK---YTGRG 73
PPP P Q + I ++ +P +V + LF +L TGR
Sbjct: 297 PPPDWDGPAAGPQGSGHEI---YIGKIPKEVYEDTLITLFEDMGKIWDLRLMMDPLTGR- 352
Query: 74 NQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRK------KRKPGSGA 127
N+ AF T+ + +A A + +G + P G L + ++ +N+R K K
Sbjct: 353 NRGYAFLTYCDKTSAYEAAKKFDGYEIMP--GKNLKVNVSVANTRLFIGNIPKSKSKEEI 410
Query: 128 YVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAP 187
+ T+ + SS D E+ R D D T + + P
Sbjct: 411 LAEFKEHTEGVTDCIIYSS----PDAGESRKNRGFCFLDFCDHKTASDAKRKIHAGKLRP 466
Query: 188 INS----------EKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARG 237
NS E+P E + L++ NL TE++LK+ S Y + RA+
Sbjct: 467 WNSDLVVDWAEQQEEPDEETMAKVKVLYVRNLKEAVTEEQLKEMFSAYGEVD----RAKK 522
Query: 238 GMPVAFADFEEVEQASIAMEGLQDSTL 264
AF F E E A AME L + L
Sbjct: 523 IRDYAFIHFMEREPAIKAMEALNGTEL 549
>gi|392568232|gb|EIW61406.1| hypothetical protein TRAVEDRAFT_34908 [Trametes versicolor
FP-101664 SS1]
Length = 1021
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 200 PCSTLFIANLGPNCT----------EDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEV 249
P +TL++ NL P T ED L+ S G+ L R + P+ F +FE V
Sbjct: 779 PINTLYVGNL-PTSTSPGGYTLSFLEDRLRDLFSKQLGYRKLCFRQKSNGPMCFIEFETV 837
Query: 250 EQASIAMEGLQDSTLPSSDR-GGMHIEYARSKM 281
E A+ A+ L +L R GG+ + Y+++ +
Sbjct: 838 EYATKALNELYGDSLNGLVRNGGIRLSYSKNPL 870
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 75 QVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSG 126
Q++ FA F A+ A L G + D + G+VL E+A+ N KR PG G
Sbjct: 398 QIIGFAKFRTRADALQARDVLQGRRVDVEKGAVLKAEMAKKNLHTKRGPGVG 449
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLK 68
P + Q I+T+FV G PDD+ RE N+F GF+ LK
Sbjct: 275 PVPNSQAQEEISTIFVVGFPDDMSEREFQNMFTFSSGFEAATLK 318
>gi|325091401|gb|EGC44711.1| nucleic acid-binding protein [Ajellomyces capsulatus H88]
Length = 359
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 189 NSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRA--RGGMPVAFA-- 244
NS P +P TLFI NL T+ EL P + +++ R G P FA
Sbjct: 229 NSAAPRTRASEPTKTLFIGNLSFEMTDRELNDLFRDIPNVDDVRVSVDKRTGRPRGFAHA 288
Query: 245 DFEEVEQASIAMEGLQD 261
DF +VE A AME L++
Sbjct: 289 DFLDVESAKAAMEILKE 305
>gi|327350509|gb|EGE79366.1| hypothetical protein BDDG_02305 [Ajellomyces dermatitidis ATCC
18188]
Length = 243
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 34 GINTLFVSGLPDDVRAREIHNLFRRKPG-FDFCQLKYTGRG-NQVVAFATFVNHQTAVAA 91
G + + VSGLP DV I F + G L Y G ++ +A TFV TA A
Sbjct: 67 GESKIIVSGLPSDVNEANIKEYFHKSAGPVKKVMLTYNQNGTSRGIAAITFVRPDTAAKA 126
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSR 118
ELNG+ D + + IE+ SR
Sbjct: 127 AKELNGLLIDKRP---IKIEVVLDASR 150
>gi|302816013|ref|XP_002989686.1| hypothetical protein SELMODRAFT_184747 [Selaginella moellendorffii]
gi|300142463|gb|EFJ09163.1| hypothetical protein SELMODRAFT_184747 [Selaginella moellendorffii]
Length = 228
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 196 GGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIA 255
G +P S LFI NL + L+ + YPG ++M G +AF ++ + QA++A
Sbjct: 147 GTQEPNSILFIQNLPDETSGPMLEMLFTRYPGLKDVRM-VDGRPGIAFVEYSDEGQATVA 205
Query: 256 MEGLQDSTLPSSDRGGMHIEYAR 278
+E LQ + ++ M I YA+
Sbjct: 206 LEALQSFKITANH--AMVISYAK 226
>gi|115480273|ref|NP_001063730.1| Os09g0527500 [Oryza sativa Japonica Group]
gi|52077323|dbj|BAD46364.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113631963|dbj|BAF25644.1| Os09g0527500 [Oryza sativa Japonica Group]
gi|218202489|gb|EEC84916.1| hypothetical protein OsI_32115 [Oryza sativa Indica Group]
gi|222641953|gb|EEE70085.1| hypothetical protein OsJ_30081 [Oryza sativa Japonica Group]
Length = 235
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVAA 91
TL+V GLP + RE+ ++FR GF +L ++ G N ++ F F + A AA
Sbjct: 138 TLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKEIRHAGSCN-LLCFVDFSSPPEARAA 196
Query: 92 LHELNGVKFDP--QSGSVLHIELARSNSRK 119
L L G KFD S L I+ + + R+
Sbjct: 197 LETLQGYKFDEHDHESSNLRIQFSLTPRRR 226
>gi|47834685|gb|AAT38996.1| Mei2-like protein [Pinus taeda]
Length = 632
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 9/117 (7%)
Query: 150 DSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANL 209
DSD+ E V+N ++ D++T + N A I E PY G P TLF+ N+
Sbjct: 2 DSDSLENLNVKNNNAIS--DYITGGGAGHSGVSNVPATIVGEHPY--GEHPSRTLFVRNI 57
Query: 210 GPNCTEDELKQTLSVYPGFNML--KMRARGGMPVAFADFEEVEQASIAMEGLQDSTL 264
N + EL+ Y L + RG + +++ D + A AM LQ+ L
Sbjct: 58 NSNVEDSELRTYFEHYGDIRTLYTACKHRGFVMISYYD---IRAARNAMRALQNKPL 111
>gi|255586946|ref|XP_002534073.1| RNA-binding protein, putative [Ricinus communis]
gi|223525900|gb|EEF28317.1| RNA-binding protein, putative [Ricinus communis]
Length = 779
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 183 NAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNML--KMRARGGMP 240
N A + E PY G P TLF+ N+ N + ELK Y L + RG +
Sbjct: 139 NGAATVAGEHPY--GEHPSRTLFVRNINSNVEDSELKSLFEQYGDIRTLYTACKHRGFVM 196
Query: 241 VAFADFEEVEQASIAMEGLQDSTL 264
+++ D + A AM GLQ+ L
Sbjct: 197 ISYYD---IRDARAAMRGLQNKPL 217
>gi|242036017|ref|XP_002465403.1| hypothetical protein SORBIDRAFT_01g038060 [Sorghum bicolor]
gi|241919257|gb|EER92401.1| hypothetical protein SORBIDRAFT_01g038060 [Sorghum bicolor]
Length = 233
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
P + LFI NL T L+ YPGF ++M A+ G +AF +FE+ Q+ +AM+
Sbjct: 157 PNNILFIQNLPDQTTSMMLQILFQQYPGFREVRMIEAKPG--IAFVEFEDDSQSMVAMQA 214
Query: 259 LQDSTLPSSDRGGMHIEYAR 278
LQ + + M I YA+
Sbjct: 215 LQGFKI--TPENPMAISYAK 232
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 14/86 (16%)
Query: 19 PPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVA 78
PP PP N LF+ LPD + + LF++ PGF ++ G +A
Sbjct: 153 PPAPPN-----------NILFIQNLPDQTTSMMLQILFQQYPGFREVRMIEAKPG---IA 198
Query: 79 FATFVNHQTAVAALHELNGVKFDPQS 104
F F + ++ A+ L G K P++
Sbjct: 199 FVEFEDDSQSMVAMQALQGFKITPEN 224
>gi|242803744|ref|XP_002484236.1| transformer-SR ribonucleoprotein, putative [Talaromyces stipitatus
ATCC 10500]
gi|218717581|gb|EED17002.1| transformer-SR ribonucleoprotein, putative [Talaromyces stipitatus
ATCC 10500]
Length = 329
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 20/124 (16%)
Query: 144 SSSADGDSDTDEA---SPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQP 200
S+S GDS D SP RN D A GD + AP N ++ EG V P
Sbjct: 24 SASPRGDSRADRDRSLSPSRNDDRAPAGDSRKS------------APGNDDED-EGAVNP 70
Query: 201 CSTLFIANLGPNCTEDELKQTLSVYPGFN----MLKMRARGGMPVAFADFEEVEQASIAM 256
S LF+ + P TE ++ + Y ML + F EQA A
Sbjct: 71 GSNLFVTGIHPRLTEADISRLFEKYGDVESCSIMLDPHTKESRGFGFVKMVTAEQADAAK 130
Query: 257 EGLQ 260
EGLQ
Sbjct: 131 EGLQ 134
>gi|156101217|ref|XP_001616302.1| RNA binding function [Plasmodium vivax Sal-1]
gi|148805176|gb|EDL46575.1| RNA binding function, putative [Plasmodium vivax]
Length = 670
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 32 DNGINTLFVSGLPDDVRAREIHNLFRR-KPGFDFCQL-KYTGRG-NQVVAFATFVNHQTA 88
D G +++V GLP EI LF R F ++ K T + N++ F F NH
Sbjct: 127 DKGTYSIYVGGLPKGTTKEEIETLFSRFYSSICFVKMIKNTQKNQNKIYCFIHFFNHDEC 186
Query: 89 VAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPG 124
+ AL E++G F I++++SN K K G
Sbjct: 187 IRALTEMDGHDFKG-----CKIKVSKSNGVKIGKGG 217
>gi|145538301|ref|XP_001454856.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422633|emb|CAK87459.1| unnamed protein product [Paramecium tetraurelia]
Length = 228
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQD 261
+ L I +L P TE L + YPG++++K+ + G+ AF +++ +QA++A++GL +
Sbjct: 155 NVLLIESLPPFVTEIMLSELFRQYPGYSLIKLISARGL--AFVEYQNDDQATVALKGLNN 212
Query: 262 STLPSSDRGGMHIEYARS 279
+ + ++YA+
Sbjct: 213 --FKVTPECQLKVKYAKK 228
>gi|413934626|gb|AFW69177.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 58
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 233 MRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
M+ + G PVAF DF++ ++ A+ LQ L SS GM +EYA+S+M
Sbjct: 1 MQNKLGAPVAFVDFKDAISSTEAINRLQGVILYSSSGEGMRLEYAKSRM 49
>gi|328869164|gb|EGG17542.1| U2 small nuclear ribonucleoprotein B [Dictyostelium fasciculatum]
Length = 241
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 33/193 (17%)
Query: 78 AFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKT 137
AF F + A AL E+NG F ++ ++++ +++ S K G YV + +T
Sbjct: 72 AFIVFQDITAASNALREMNGFSFFDRN---INVQYSKNKSDAVSKL-DGTYVEKKRERET 127
Query: 138 EANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGG 197
E +++ D T ++ + +T SGN VAP E P
Sbjct: 128 EQEKRKAKKQDNKKSTKQSKT----------------TSTSTPSGN-VAP--REAP---- 164
Query: 198 VQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAM 256
P LF+ NL NC E ++ S +PGF + M AR G VAF ++++ ++ +AM
Sbjct: 165 --PNRILFVENLPDNCQEMMIQMLFSQFPGFQSVNMTTARKG--VAFVEYDDDIKSGLAM 220
Query: 257 EGLQDSTLPSSDR 269
LQ + +SDR
Sbjct: 221 SHLQGFKV-TSDR 232
>gi|313761403|gb|ADR79706.1| RNA binding protein U620 [Marsilea vestita]
Length = 118
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 33 NGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQT 87
+ +TL+V G+P D RE ++FR GF +L K G V+ F F + +
Sbjct: 1 DATSTLYVEGVPADCSRREAAHIFRPFVGFKEVRLVRKDAKRPGGDQFVLCFVDFTDPKC 60
Query: 88 AVAALHELNGVKFDP--QSGSVLHIELAR 114
A AL L G KFD ++ L ++ +R
Sbjct: 61 ASIALEALQGYKFDETDRNSETLRLQYSR 89
>gi|255564206|ref|XP_002523100.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis]
gi|223537662|gb|EEF39285.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis]
Length = 254
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 15/99 (15%)
Query: 190 SEKPYEGGVQ---------PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGM 239
S+ PY GG + P + LFI NL + T L+ Y GF ++M ++ G
Sbjct: 160 SQIPYPGGAKSMVPEAPAPPNNILFIQNLPNDTTTMVLQMLFQHYAGFKEVRMVESKPG- 218
Query: 240 PVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYAR 278
+AF ++ + Q+++AM+GLQ + + M I YA+
Sbjct: 219 -IAFVEYADEMQSTVAMQGLQGLKI---QQNPMLITYAK 253
>gi|388501866|gb|AFK38999.1| unknown [Medicago truncatula]
Length = 234
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 178 ATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RAR 236
A++ G+ A + P + LFI NL T L+ YPGF +++ A+
Sbjct: 136 ASNGGSTQASFRPGSGAQEAAAPNNILFIENLPYETTGRMLEMLFEQYPGFKEVRLIEAK 195
Query: 237 GGMPVAFADFEEVEQASIAMEGLQ 260
G +AF DFE+ Q+S+AM+ LQ
Sbjct: 196 PG--IAFVDFEDDGQSSMAMQALQ 217
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
N LF+ LP + R + LF + PGF +L G +AF F + + A+ L
Sbjct: 160 NILFIENLPYETTGRMLEMLFEQYPGFKEVRLIEAKPG---IAFVDFEDDGQSSMAMQAL 216
Query: 96 NGVKFDPQSGSVLHI 110
G K PQ+ +++
Sbjct: 217 QGFKITPQNPMIINF 231
>gi|307173250|gb|EFN64303.1| Heterogeneous nuclear ribonucleoprotein Q [Camponotus floridanus]
Length = 683
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 106/272 (38%), Gaps = 26/272 (9%)
Query: 22 PPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKY--TGRGNQVVAF 79
PPP + G +F +P D+ E+ LF + +L N+ AF
Sbjct: 147 PPPNWEGPTPGTGCE-VFCGKIPKDMYEDELIPLFEKCGKIWDLRLMMDPMSGSNRGYAF 205
Query: 80 ATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSR---KKRKPGSGAYVVIDKRTK 136
TF N + A A+ EL+ + P G L + ++ N R G ++++ K
Sbjct: 206 ITFTNREAAQQAVRELDNHEIKP--GKSLKVNISVPNLRLFVGNIPKSKGKEEILEEFGK 263
Query: 137 TEANVQES---SSADGDSDTDEASPVRNIDSADKGDF----VTTQSERATDSGNAVAPIN 189
A + E SS D D + +S ++T + V +
Sbjct: 264 LTAGLTEVIIYSSPD-DKKKNRGFCFLEYESHKAASLAKRRLSTGRIKVWGCDIIVDWAD 322
Query: 190 -SEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEE 248
E+P E + L++ NL +C+E++LK++ Y R + AF FE+
Sbjct: 323 PQEEPDEQTMSKVRVLYVRNLTQDCSEEKLKESFEQYGKIE----RVKKIKDYAFIHFED 378
Query: 249 VEQASIAMEGLQDSTLPSSDRGGMHIEYARSK 280
+ A AM + L + GG HIE + +K
Sbjct: 379 RDNAVKAM-----NELNGKEMGGSHIEVSLAK 405
>gi|23956384|ref|NP_705814.1| RNA-binding protein 41 isoform 2 [Mus musculus]
gi|81914521|sp|Q8JZV4.1|RBM41_MOUSE RecName: Full=RNA-binding protein 41; AltName: Full=RNA-binding
motif protein 41
gi|22477722|gb|AAH37024.1| RNA binding motif protein 41 [Mus musculus]
gi|26351139|dbj|BAC39206.1| unnamed protein product [Mus musculus]
gi|26351197|dbj|BAC39235.1| unnamed protein product [Mus musculus]
gi|148691973|gb|EDL23920.1| RNA binding motif protein 41, isoform CRA_a [Mus musculus]
Length = 413
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 36 NTLFVSGLPDDVRAREIHNLF-----RRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
L++ L V+ R++ +LF ++ P F + RG AF TF N A
Sbjct: 309 KVLYLKNLSPRVKERDLISLFARFQEKKGPPIQFRMMTGRMRGQ---AFLTFPNKDIAWQ 365
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRK 119
ALH++NG K G +L IE A+S ++
Sbjct: 366 ALHQINGYKL---YGKILVIEFAKSKKQQ 391
>gi|159470585|ref|XP_001693437.1| predicted protein [Chlamydomonas reinhardtii]
gi|158282940|gb|EDP08691.1| predicted protein [Chlamydomonas reinhardtii]
Length = 233
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
P LF+ NL E L +PGF ++M AR G +AF ++E Q+ AM+G
Sbjct: 157 PNKILFVQNLPETSNEAMLGMLFQQFPGFREVRMVEARPG--IAFVEYENEMQSGTAMQG 214
Query: 259 LQDSTLPSSDRGGMHIEYAR 278
LQ + ++ M+I +A+
Sbjct: 215 LQGFKITPAN--AMNITFAK 232
>gi|156081688|ref|XP_001608337.1| U2 small nuclear ribonucleoprotein B'' [Plasmodium vivax Sal-1]
gi|148800908|gb|EDL42313.1| U2 small nuclear ribonucleoprotein B'', putative [Plasmodium vivax]
Length = 192
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQ 260
TLF+ NL + L+ S YPGF ++R G VAF DF + +AM GLQ
Sbjct: 121 TLFVQNLPNEINKSALEILFSQYPGF--CEVRHIPGRNVAFVDFSSYQNGEVAMSGLQ 176
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT-GRGNQVVAFATFVNHQTAVAALHEL 95
TLFV LP+++ + LF + PG FC++++ GR VAF F ++Q A+ L
Sbjct: 121 TLFVQNLPNEINKSALEILFSQYPG--FCEVRHIPGRN---VAFVDFSSYQNGEVAMSGL 175
Query: 96 NGVKFDPQ 103
K PQ
Sbjct: 176 QSFKVTPQ 183
>gi|357491327|ref|XP_003615951.1| U1 small nuclear ribonucleoprotein A [Medicago truncatula]
gi|355517286|gb|AES98909.1| U1 small nuclear ribonucleoprotein A [Medicago truncatula]
gi|388501104|gb|AFK38618.1| unknown [Medicago truncatula]
Length = 233
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
P + LFI NL T L+ YPGF +++ A+ G +AF DFE+ Q+S+AM+
Sbjct: 157 PNNILFIENLPYETTGRMLEMLFEQYPGFKEVRLIEAKPG--IAFVDFEDDGQSSMAMQA 214
Query: 259 LQ 260
LQ
Sbjct: 215 LQ 216
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
N LF+ LP + R + LF + PGF +L G +AF F + + A+ L
Sbjct: 159 NILFIENLPYETTGRMLEMLFEQYPGFKEVRLIEAKPG---IAFVDFEDDGQSSMAMQAL 215
Query: 96 NGVKFDPQSGSVLHI 110
G K PQ+ +++
Sbjct: 216 QGFKITPQNPMIINF 230
>gi|327282018|ref|XP_003225741.1| PREDICTED: RNA-binding protein 45-like [Anolis carolinensis]
Length = 271
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 21/131 (16%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
L VS P +++ +L PG ++C++ + ++V A + N +A+ A H+L+G
Sbjct: 129 LVVSEFP--FEKQQLVSLLNLIPGMEYCEMSHGLYSSRVYAVVQYNNAASAIYAKHKLHG 186
Query: 98 VKFDPQSGSVLHIELARS--------NSRKKRKPGSGAYVVIDKRTKTEANVQESSSADG 149
F+ SG+ L + S K+KP + +Y +R +T+A E S+ G
Sbjct: 187 --FEYPSGNWLIVTFIEEGTVQRNLIKSAAKQKPSTSSY----RRLQTDA---ELPSSKG 237
Query: 150 DSDTDEASPVR 160
+ +D SPVR
Sbjct: 238 KAPSD--SPVR 246
>gi|288541344|ref|NP_001165618.1| RNA-binding protein 41 isoform 1 [Mus musculus]
Length = 425
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 36 NTLFVSGLPDDVRAREIHNLF-----RRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
L++ L V+ R++ +LF ++ P F + RG AF TF N A
Sbjct: 321 KVLYLKNLSPRVKERDLISLFARFQEKKGPPIQFRMMTGRMRGQ---AFLTFPNKDIAWQ 377
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRK 119
ALH++NG K G +L IE A+S ++
Sbjct: 378 ALHQINGYKL---YGKILVIEFAKSKKQQ 403
>gi|115477659|ref|NP_001062425.1| Os08g0547000 [Oryza sativa Japonica Group]
gi|42408101|dbj|BAD09242.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|42408712|dbj|BAD09930.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113624394|dbj|BAF24339.1| Os08g0547000 [Oryza sativa Japonica Group]
gi|215767903|dbj|BAH00132.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 294
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-----RARGGMP--VAFADFEEVEQASI 254
STL++ L NCT E+ + GF +++ R GG P + F DF+ QA++
Sbjct: 169 STLYVEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDNPAQATL 228
Query: 255 AMEGLQ 260
A+E LQ
Sbjct: 229 ALEALQ 234
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 14/86 (16%)
Query: 17 PPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTG 71
P PP+P + +TL+V GLP + RE+ ++FR GF +L ++ G
Sbjct: 159 PEPPLPA---------DASSTLYVEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPG 209
Query: 72 RGNQVVAFATFVNHQTAVAALHELNG 97
V+ F F N A AL L G
Sbjct: 210 GDPHVLCFVDFDNPAQATLALEALQG 235
>gi|409050459|gb|EKM59936.1| hypothetical protein PHACADRAFT_250746 [Phanerochaete carnosa
HHB-10118-sp]
Length = 568
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 75 QVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKP 123
Q++ FA F Q A+ A L G + D + GSVL E+A+ N KR P
Sbjct: 93 QIIGFAKFRTRQEALEARDVLQGRRVDLEKGSVLKAEMAKKNLHTKRGP 141
>gi|393216047|gb|EJD01538.1| hypothetical protein FOMMEDRAFT_90081, partial [Fomitiporia
mediterranea MF3/22]
Length = 265
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 25 PYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLK 68
P QQ++ I+T+FV G PDD++ RE N+F GF+ LK
Sbjct: 65 PITTQQEE--ISTIFVVGFPDDMQEREFQNMFTFSSGFEAATLK 106
>gi|308499132|ref|XP_003111752.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
gi|308239661|gb|EFO83613.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
Length = 317
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
+T++V LP DVR +E+ +LF + ++K AF F +H+ A A+
Sbjct: 7 STIYVGNLPPDVREKEVEDLFHKYGDIRNVEVKTRHGETHSFAFVQFDSHRDAKEAVRSR 66
Query: 96 NGVKFDPQSGSVLHIEL 112
+G FD G L +E
Sbjct: 67 DGYDFD---GKRLRVEF 80
>gi|70986996|ref|XP_748983.1| transformer-SR ribonucleoprotein [Aspergillus fumigatus Af293]
gi|66846613|gb|EAL86945.1| transformer-SR ribonucleoprotein, putative [Aspergillus fumigatus
Af293]
gi|159123248|gb|EDP48368.1| transformer-SR ribonucleoprotein, putative [Aspergillus fumigatus
A1163]
Length = 304
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 167 KGDFVTTQS--ERATDSGNAVAPINSEKP---YEGGVQPCSTLFIANLGPNCTEDELKQT 221
+GD ++S RA D AP++S KP EG V P S LF+ + P TE ++ +
Sbjct: 31 RGDRARSRSPNGRADDR----APVDSRKPDDDEEGAVNPGSNLFVTGIHPRLTESDISRL 86
Query: 222 LSVYPGFN----MLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTL 264
Y M+ + F EQA A EGLQ +
Sbjct: 87 FEKYGDVESCSIMVDPHTKESRGFGFVKMVTAEQADAAKEGLQGEVI 133
>gi|443927409|gb|ELU45901.1| RNA recognition domain-containing protein [Rhizoctonia solani AG-1
IA]
Length = 1372
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 200 PCSTLFIANL--------GPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFAD--FEEV 249
P +TL++ NL P+ E+ L+ + PG+ L R + P+ F + FE+V
Sbjct: 1076 PINTLYVGNLPTASGQAHSPSYLEEALRGLFARTPGYRKLCFRQKSNGPMCFVEVNFEDV 1135
Query: 250 EQASIAMEGLQDSTLPSSDRGGMHIEYARSKM 281
A+ A+ + +TL +GG+ + ++++ +
Sbjct: 1136 NYATKALNEMYGNTLNGLVKGGIRLSFSKNPL 1167
>gi|74218798|dbj|BAE37811.1| unnamed protein product [Mus musculus]
Length = 425
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 36 NTLFVSGLPDDVRAREIHNLF-----RRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
L++ L V+ R++ +LF ++ P F + RG AF TF N A
Sbjct: 321 KVLYLKNLSPRVKERDLISLFARFQEKKGPPIQFRMMTGRMRGQ---AFLTFPNKDIAWQ 377
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRK 119
ALH++NG K G +L IE A+S ++
Sbjct: 378 ALHQINGYKL---YGKILVIEFAKSKKQQ 403
>gi|308466765|ref|XP_003095634.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
gi|308244633|gb|EFO88585.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
Length = 328
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELN 96
T++V LP +VR +EI ++F + +K R + AF F + + A A+ +
Sbjct: 5 TVYVGNLPSNVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRARD 64
Query: 97 GVKFDPQSGSVLHIEL 112
G +FD G L +E
Sbjct: 65 GYEFD---GKRLRVEF 77
>gi|296086312|emb|CBI31753.3| unnamed protein product [Vitis vinifera]
Length = 451
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 183 NAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNML--KMRARGGMP 240
N VA + E PY G P TLF+ N+ N + ELK Y L + RG +
Sbjct: 176 NGVATVAGEHPY--GEHPSRTLFVRNINSNVEDSELKTLFEQYGDIRTLYTACKHRGFVM 233
Query: 241 VAFADFEEVEQASIAMEGLQDSTL 264
+++ D + A AM LQ+ L
Sbjct: 234 ISYYD---IRAARTAMRALQNKPL 254
>gi|326490583|dbj|BAJ89959.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 333
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-----RARGGMP--VAFADFEEVEQASI 254
+TL+I L NCT E+ + GF +++ R GG P + F DF+ QA+I
Sbjct: 184 NTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDSPAQATI 243
Query: 255 AMEGLQ 260
A+E LQ
Sbjct: 244 ALEALQ 249
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 17 PPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTG 71
P PP+PP + NTL++ GLP + RE+ ++FR GF +L ++ G
Sbjct: 174 PEPPLPP---------DASNTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPG 224
Query: 72 RGNQVVAFATFVNHQTAVAALHELNG 97
V+ F F + A AL L G
Sbjct: 225 GDPHVLCFVDFDSPAQATIALEALQG 250
>gi|402595099|gb|EJW89025.1| heterogeneous nuclear ribonucleoprotein Q [Wuchereria bancrofti]
Length = 688
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 99/267 (37%), Gaps = 33/267 (12%)
Query: 17 PPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLK---YTGRG 73
PPP P Q + I ++ +P +V + LF +L TGR
Sbjct: 276 PPPDWDGPAAGPQGSGHEI---YIGKIPKEVYEDTLITLFEDMGKIWDLRLMMDPLTGR- 331
Query: 74 NQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRK------KRKPGSGA 127
N+ AF T+ + A A + +G + P G L + ++ +N+R K K
Sbjct: 332 NRGYAFLTYCDKTAAYEAAKKFDGYEIMP--GKNLKVNVSVANTRLFIGNIPKSKSKEEI 389
Query: 128 YVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAP 187
+ T+ + SS D E+ R D D T + + P
Sbjct: 390 LAEFKEHTEGVTDCIIYSS----PDAGESRKNRGFCFLDFCDHKTASDAKRKIHAGKLRP 445
Query: 188 INS----------EKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARG 237
NS E+P E + L++ NL TE++LK+ S Y + RA+
Sbjct: 446 WNSDLVVDWAEQQEEPDEETMAKVKVLYVRNLKEAVTEEQLKEMFSAYGEVD----RAKK 501
Query: 238 GMPVAFADFEEVEQASIAMEGLQDSTL 264
AF F E E A AME L + +
Sbjct: 502 IRDYAFIHFMEREPAIKAMEALNEKMM 528
>gi|162312534|ref|XP_001713104.1| RNA-binding protein [Schizosaccharomyces pombe 972h-]
gi|1723533|sp|Q10422.1|YDC1_SCHPO RecName: Full=Uncharacterized RNA-binding protein C25G10.01
gi|159884012|emb|CAB16378.2| RNA-binding protein [Schizosaccharomyces pombe]
Length = 297
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 8/139 (5%)
Query: 129 VVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADK-GDFVTTQSERATDSGNAVAP 187
V++ T + + E G++D+D S N+ D G+ + + +E D N
Sbjct: 24 AVLETETSQDIHQLEIEKDAGETDSDAGSIAMNVHQLDTAGEPLQSMNEDEVDPNNESTA 83
Query: 188 INSEKPY---EGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLK-MR---ARGGMP 240
++ ++P EG + LF++ + EDEL+Q S + ++ MR +
Sbjct: 84 LDKKEPQSAPEGSENLGNDLFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRG 143
Query: 241 VAFADFEEVEQASIAMEGL 259
F F VE+A+ A++ L
Sbjct: 144 FGFLSFSTVEEATSAIDNL 162
>gi|327261565|ref|XP_003215600.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Anolis
carolinensis]
Length = 634
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 109/269 (40%), Gaps = 37/269 (13%)
Query: 22 PPPPYHHQQQDNGINT-LFVSGLPDDVRAREIHNLFRRK-PGFDFCQLK--YTGRGNQVV 77
PPP + Q + T +FV +P D+ E+ LF + P +D + TG N+
Sbjct: 158 PPPECVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGL-NRGY 216
Query: 78 AFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKT 137
AF TF N + A A+ N + +SG + + ++ +N+R +V ++KT
Sbjct: 217 AFVTFCNKEAAQEAVKLYN--NHEIRSGKHIGVCISVANNR--------LFVGSIPKSKT 266
Query: 138 EANVQE--SSSADGDSDT------DEASPVRNIDSADKGDFVT-TQSERATDSGNA---- 184
+ + E S +G +D D+ R + D T Q+ R SG
Sbjct: 267 KEQIVEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWG 326
Query: 185 -VAPINSEKPYEG----GVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM 239
V + P E + LF+ NL + TE+ L++ S + +K
Sbjct: 327 NVVTVEWADPIEDPDPEVMAKVKVLFVRNLANSVTEEILEKAFSQFGKLERVKKLK---- 382
Query: 240 PVAFADFEEVEQASIAMEGLQDSTLPSSD 268
AF F+E + A AMEG+ L +
Sbjct: 383 DYAFIHFDERDGAVKAMEGMNGKELEGEN 411
>gi|50551429|ref|XP_503188.1| YALI0D23375p [Yarrowia lipolytica]
gi|49649056|emb|CAG81388.1| YALI0D23375p [Yarrowia lipolytica CLIB122]
Length = 146
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 44/92 (47%), Gaps = 20/92 (21%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFN----------MLKMRARGGMPVAFADFEEV 249
P TL++ NL CT+ +LK+ L Y F+ M R RG V F D +
Sbjct: 29 PSPTLYVKNLTDKCTKSDLKRYL--YMRFSSYGHILDIVAMKNERMRGQAHVVFNDID-- 84
Query: 250 EQASI-AMEGLQDSTLPSSDRGGMHIEYARSK 280
ASI A+ GLQ S + M IEYARSK
Sbjct: 85 --ASISALNGLQKSEFMGKE---MVIEYARSK 111
>gi|115480271|ref|NP_001063729.1| Os09g0527100 [Oryza sativa Japonica Group]
gi|113631962|dbj|BAF25643.1| Os09g0527100 [Oryza sativa Japonica Group]
Length = 149
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVAA 91
TL+V GLP + RE+ ++FR GF +L ++ G N ++ F F + A AA
Sbjct: 52 TLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRHAGSCN-LLCFVDFSSPPEARAA 110
Query: 92 LHELNGVKFD 101
L L G KFD
Sbjct: 111 LETLQGYKFD 120
>gi|170592443|ref|XP_001900974.1| hnRNP-R, Q splicing factor family protein [Brugia malayi]
gi|158591041|gb|EDP29654.1| hnRNP-R, Q splicing factor family protein [Brugia malayi]
Length = 709
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 99/267 (37%), Gaps = 33/267 (12%)
Query: 17 PPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLK---YTGRG 73
PPP P Q + I ++ +P +V + LF +L TGR
Sbjct: 277 PPPDWDGPAAGPQGSGHEI---YIGKIPKEVYEDTLITLFEDMGKIWDLRLMMDPLTGR- 332
Query: 74 NQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRK------KRKPGSGA 127
N+ AF T+ + A A + +G + P G L + ++ +N+R K K
Sbjct: 333 NRGYAFLTYCDKTAAYEAAKKFDGYEIMP--GKNLKVNVSVANTRLFIGNIPKSKSKEEI 390
Query: 128 YVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAP 187
+ T+ + SS D E+ R D D T + + P
Sbjct: 391 LAEFKEHTEGVTDCIIYSS----PDAGESRKNRGFCFLDFCDHKTASDAKRKIHAGKLRP 446
Query: 188 INS----------EKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARG 237
NS E+P E + L++ NL TE++LK+ S Y + RA+
Sbjct: 447 WNSDLVVDWAEQQEEPDEETMAKVKVLYVRNLKEAVTEEQLKEMFSAYGEVD----RAKK 502
Query: 238 GMPVAFADFEEVEQASIAMEGLQDSTL 264
AF F E E A AME L + L
Sbjct: 503 IRDYAFIHFMEREPAIKAMEALNGTEL 529
>gi|402580945|gb|EJW74894.1| hypothetical protein WUBG_14199, partial [Wuchereria bancrofti]
Length = 271
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Query: 29 QQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRG-NQVVAFATFVNHQT 87
QQQ+ L+++ LP + R++ L ++ G G ++ V FA N +
Sbjct: 67 QQQEQDPTNLYLANLPPNYTERDLQKLLESYGSTISTRVLKNGDGSSRCVGFARMDNEEL 126
Query: 88 AVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKP 123
+ E+NG K P L ++ A SN + K +P
Sbjct: 127 CAKIIKEMNGKKIIPGCNLPLMVKYADSNKKTKSRP 162
>gi|239607722|gb|EEQ84709.1| nucleic acid-binding protein [Ajellomyces dermatitidis ER-3]
Length = 153
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 190 SEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRA--RGGMPVAFA--D 245
S +P P TLFI NL T+ EL + P +++ R G P FA D
Sbjct: 18 STEPKTRATGPTKTLFIGNLSFEMTDRELNEMFKDIPNVKDVRVSVDKRTGRPRGFAHAD 77
Query: 246 FEEVEQASIAMEGLQD 261
F +VE A ME L+D
Sbjct: 78 FLDVESAQAGMELLKD 93
>gi|359485142|ref|XP_002279792.2| PREDICTED: protein MEI2-like 2-like [Vitis vinifera]
Length = 842
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 183 NAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNML--KMRARGGMP 240
N VA + E PY G P TLF+ N+ N + ELK Y L + RG +
Sbjct: 170 NGVATVAGEHPY--GEHPSRTLFVRNINSNVEDSELKTLFEQYGDIRTLYTACKHRGFVM 227
Query: 241 VAFADFEEVEQASIAMEGLQDSTL 264
+++ D + A AM LQ+ L
Sbjct: 228 ISYYD---IRAARTAMRALQNKPL 248
>gi|403347348|gb|EJY73094.1| RRM domain containing protein [Oxytricha trifallax]
Length = 429
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 33 NGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKY----TGRGNQV-VAFATFVNHQT 87
N NT++V GLP D RE+ ++FR P F QL+ T G +V AFA F +
Sbjct: 311 NATNTVYVEGLPHDTTEREVAHIFR--PFLGFKQLRLIPRDTKDGQRVHFAFADFESVYQ 368
Query: 88 AVAALHELNGVKFDPQSGSVLHIELARSNSRKKRK 122
++ L G +F L A +N++ R+
Sbjct: 369 TTMVINTLQGYRFHKDDIIGLQFSYAVTNNKHGRR 403
>gi|397508069|ref|XP_003824497.1| PREDICTED: polyadenylate-binding protein 1-like 2-like, partial
[Pan paniscus]
Length = 293
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L + + ++N+F C++ +G + F F ++A
Sbjct: 178 RKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAER 237
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGD 150
A+ +NG+ + + I + R S K+R+ GA+ R T A+V+ D +
Sbjct: 238 AIDVMNGMFLNYRK-----IFVGRFKSHKEREAERGAWA----RQSTSADVK-----DFE 283
Query: 151 SDTDEASPVR 160
DTDE + +R
Sbjct: 284 EDTDEEATLR 293
>gi|340368063|ref|XP_003382572.1| PREDICTED: hypothetical protein LOC100640859 [Amphimedon
queenslandica]
Length = 790
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
P LFI+NL P TE LK +PG +++ +AF ++E QA+ AM L
Sbjct: 714 PNKILFISNLPPETTEVMLKMLFEQFPGLQEIRL-VPSRTDIAFVEYENESQATEAMSSL 772
Query: 260 QD 261
QD
Sbjct: 773 QD 774
>gi|395754119|ref|XP_002831853.2| PREDICTED: uncharacterized protein LOC100437512 [Pongo abelii]
Length = 528
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L + + ++N+F C++ +G + F F ++A
Sbjct: 413 RKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAER 472
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGD 150
A+ +NG+ + + I + R S K+R+ GA+ R T A+V+ D +
Sbjct: 473 AIDVMNGMFLNYR-----KIFVGRFKSHKEREAERGAWA----RQSTSADVK-----DFE 518
Query: 151 SDTDEASPVR 160
DTDE + +R
Sbjct: 519 EDTDEEATLR 528
>gi|19347861|gb|AAL85989.1| putative spliceosomal protein (U2B) [Arabidopsis thaliana]
Length = 228
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
P + LFI NL L+ YPGF ++M A+ G +AF ++E+ Q+S+AM+
Sbjct: 152 PNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKPG--IAFVEYEDDVQSSMAMQA 209
Query: 259 LQDSTLPSSDRGGMHIEYAR 278
LQ + + R M + +A+
Sbjct: 210 LQGFKI--TPRNPMVVSFAK 227
>gi|281202145|gb|EFA76350.1| U2 small nuclear ribonucleoprotein B [Polysphondylium pallidum
PN500]
Length = 246
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
P LF+ NL C E L S +PGF + M A+ G VAF +F++ ++++AM
Sbjct: 170 PNKILFVENLPEQCEEMMLNMLFSQFPGFQGISMTTAKKG--VAFVEFDDDSKSAVAMTH 227
Query: 259 LQ 260
LQ
Sbjct: 228 LQ 229
>gi|215707027|dbj|BAG93487.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 135
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVAA 91
TL+V GLP + RE+ ++FR GF +L ++ G N ++ F F + A AA
Sbjct: 38 TLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRHAGSCN-LLCFVDFSSPPEARAA 96
Query: 92 LHELNGVKFD 101
L L G KFD
Sbjct: 97 LETLQGYKFD 106
>gi|124507237|ref|XP_001352215.1| small nuclear ribonucleoprotein (snRNP), putative [Plasmodium
falciparum 3D7]
gi|23505245|emb|CAD52025.1| small nuclear ribonucleoprotein (snRNP), putative [Plasmodium
falciparum 3D7]
Length = 193
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQD 261
TL + NL ++ L+ + YPGF ++R G +AF DF E A I+M GLQ+
Sbjct: 122 TLLVQNLPDEINKNALEILFNQYPGF--YEVRYIPGKNIAFVDFTAQEHAEISMTGLQN 178
>gi|401422974|ref|XP_003875974.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492214|emb|CBZ27488.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 696
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLK---YTGRGNQVVAFATFVNHQTAVAALHE 94
LFV GLP VR +E+ LF + + ++ +TGR ++ +AF F N + A A+
Sbjct: 235 LFVCGLPVSVRDKELLELFEKHGEIESAKVMLDIHTGR-SRGIAFVKFKNVENAENAVDA 293
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPG 124
LNG + I + +NSR PG
Sbjct: 294 LNGTTVNGH-----QITVRVANSRAAYLPG 318
>gi|226531516|ref|NP_001149883.1| spliceosomal protein [Zea mays]
gi|194696844|gb|ACF82506.1| unknown [Zea mays]
gi|195635261|gb|ACG37099.1| spliceosomal protein [Zea mays]
gi|195659375|gb|ACG49155.1| spliceosomal protein [Zea mays]
gi|413956009|gb|AFW88658.1| Spliceosomal protein [Zea mays]
Length = 233
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
P + LFI NL T L+ YPGF ++M A+ G +AF +FE+ Q+ +AM+
Sbjct: 157 PNNILFIQNLPDQTTSMMLQILFQQYPGFREVRMIEAKPG--IAFVEFEDDGQSMVAMQA 214
Query: 259 LQDSTLPSSDRGGMHIEYAR 278
LQ + + M I YA+
Sbjct: 215 LQGFKI--TPENPMAISYAK 232
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 14/86 (16%)
Query: 19 PPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVA 78
PP PP N LF+ LPD + + LF++ PGF ++ G +A
Sbjct: 153 PPAPPN-----------NILFIQNLPDQTTSMMLQILFQQYPGFREVRMIEAKPG---IA 198
Query: 79 FATFVNHQTAVAALHELNGVKFDPQS 104
F F + ++ A+ L G K P++
Sbjct: 199 FVEFEDDGQSMVAMQALQGFKITPEN 224
>gi|312074319|ref|XP_003139917.1| arginine/serine-rich splicing factor 1B [Loa loa]
gi|307764919|gb|EFO24153.1| arginine/serine-rich splicing factor 1B [Loa loa]
Length = 266
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
+FV LP DV+ R++ ++F + +F +K+T + AF F + + A A+H +G
Sbjct: 9 VFVGNLPSDVKQRDLEDIFYKYGRINFIDIKFT--RDVPFAFVEFDDPRDARDAVHGRDG 66
Query: 98 VKFDPQSGSVLHIELA 113
FD G + +EL
Sbjct: 67 YDFD---GCRIRVELT 79
>gi|261197860|ref|XP_002625332.1| nucleic acid-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239595295|gb|EEQ77876.1| nucleic acid-binding protein [Ajellomyces dermatitidis SLH14081]
gi|327355588|gb|EGE84445.1| hypothetical protein BDDG_07390 [Ajellomyces dermatitidis ATCC
18188]
Length = 301
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 190 SEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRA--RGGMPVAFA--D 245
S +P P TLFI NL T+ EL + P +++ R G P FA D
Sbjct: 166 STEPKTRATGPTKTLFIGNLSFEMTDRELNEMFKDIPNVKDVRVSVDKRTGRPRGFAHAD 225
Query: 246 FEEVEQASIAMEGLQD 261
F +VE A ME L+D
Sbjct: 226 FLDVESAQAGMELLKD 241
>gi|426396432|ref|XP_004064447.1| PREDICTED: uncharacterized protein LOC101125114 [Gorilla gorilla
gorilla]
Length = 533
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 14/130 (10%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L + + ++N+F C++ +G + F F ++A
Sbjct: 418 RKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAER 477
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGD 150
A+ +NG+ + I + R S K+R+ GA+ R T A+V+ D +
Sbjct: 478 AIDVMNGMFLN-----YRKIFVGRFKSHKEREAERGAWA----RQSTSADVK-----DFE 523
Query: 151 SDTDEASPVR 160
DTDE + +R
Sbjct: 524 EDTDEEATLR 533
>gi|426257244|ref|XP_004022242.1| PREDICTED: polyadenylate-binding protein 1-like 2 [Ovis aries]
Length = 200
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L + + ++N+F C++ +G + F F ++A
Sbjct: 85 RKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAER 144
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGD 150
A+ +NG+ + + I + R S K+R+ GA+ R T A+V+ D +
Sbjct: 145 AIDAMNGMFLNYRK-----IFVGRFKSHKEREAERGAWA----RQSTSADVK-----DFE 190
Query: 151 SDTDEASPVR 160
DTDE + +R
Sbjct: 191 EDTDEEATLR 200
>gi|296470851|tpg|DAA12966.1| TPA: PABPC1L2B protein-like [Bos taurus]
Length = 489
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 14/130 (10%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L + + ++N+F C++ +G + F F ++A
Sbjct: 374 RKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAER 433
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGD 150
A+ +NG+ + + I + R S K+R+ GA+ R T A+V+ D +
Sbjct: 434 AIDAMNGMFLNYRK-----IFVGRFKSHKEREAERGAWA----RQSTSADVK-----DFE 479
Query: 151 SDTDEASPVR 160
DTDE + R
Sbjct: 480 EDTDEEATFR 489
>gi|119482882|ref|XP_001261469.1| transformer-SR ribonucleoprotein, putative [Neosartorya fischeri
NRRL 181]
gi|119409624|gb|EAW19572.1| transformer-SR ribonucleoprotein, putative [Neosartorya fischeri
NRRL 181]
Length = 307
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 186 APINSEKP---YEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFN----MLKMRARGG 238
AP++S KP EG + P S LF+ + P TE ++ + Y M+ +
Sbjct: 48 APVDSRKPDDDEEGAINPGSNLFVTGIHPRLTESDISRLFEKYGDVENCSIMVDPHTKES 107
Query: 239 MPVAFADFEEVEQASIAMEGLQDSTL 264
F EQA A EGLQ +
Sbjct: 108 RGFGFVKMVTAEQADAAKEGLQGEVI 133
>gi|441675859|ref|XP_003280927.2| PREDICTED: uncharacterized protein LOC100588478 [Nomascus
leucogenys]
Length = 485
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 14/130 (10%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L + + ++N+F C++ +G + F F ++A
Sbjct: 370 RKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAER 429
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGD 150
A+ +NG+ + I + R S K+R+ GA+ R T A+V+ D +
Sbjct: 430 AIDVMNGMFLN-----YRKIFVGRFKSHKEREAERGAWA----RQSTSADVK-----DFE 475
Query: 151 SDTDEASPVR 160
DTDE + +R
Sbjct: 476 EDTDEEATLR 485
>gi|392577175|gb|EIW70305.1| hypothetical protein TREMEDRAFT_71583 [Tremella mesenterica DSM
1558]
Length = 339
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKY---TGRGNQVVAFATFVNHQTAVAALH 93
T+FV+ L DV ++ N+F ++K+ TGR AF TF + TA++A+
Sbjct: 6 TVFVANLAFDVSEEQLANVFSEVGPVQSAEIKFDNQTGRPKG-YAFVTFYDEATAISAIR 64
Query: 94 ELNGVKFDPQSGSVLHIELAR---SNSRKKRKPGSGAYV 129
L + G L IEL+ ++SR++R G A V
Sbjct: 65 NLRDTNVN---GRTLRIELSNDDPASSRRRRDHGPPAPV 100
>gi|351712152|gb|EHB15071.1| U1 small nuclear ribonucleoprotein A [Heterocephalus glaber]
Length = 272
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 79/206 (38%), Gaps = 17/206 (8%)
Query: 78 AFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVID-KRTK 136
A F +A AL + G F + I+ A++NS K G +V D KR K
Sbjct: 55 ALVIFKEVSSATNALRSMQGFPF---YDKPMRIQYAKANSDIIAK-LKGTFVERDRKREK 110
Query: 137 TEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPIN--SEKPY 194
+ QE+ SA A+PV Q + P SE P
Sbjct: 111 RKPKSQEAPSAKKAVQGGAAAPVAASWHDPPPGLAPGQMPPQQIMPGQMPPAQPLSENP- 169
Query: 195 EGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASI 254
P LF+ NL E L + +PGF ++ G +AF +F+EV QA
Sbjct: 170 -----PNHILFLTNLPEETNELMLSMPFNQFPGFQEARL-VPGRHDIAFVEFDEV-QAGA 222
Query: 255 AMEGLQDSTLPSSDRGGMHIEYARSK 280
A E LQ + + M I +A+ +
Sbjct: 223 AREALQGYKI--TQNNAMKISFAKKQ 246
>gi|291407697|ref|XP_002720156.1| PREDICTED: polyadenylate-binding protein 1-like [Oryctolagus
cuniculus]
gi|301792853|ref|XP_002931393.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Ailuropoda
melanoleuca]
gi|311276495|ref|XP_003135232.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Sus scrofa]
gi|335306198|ref|XP_003360416.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Sus scrofa]
gi|281338845|gb|EFB14429.1| hypothetical protein PANDA_022442 [Ailuropoda melanoleuca]
Length = 200
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L + + ++N+F C++ +G + F F ++A
Sbjct: 85 RKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAER 144
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGD 150
A+ +NG+ + + I + R S K+R+ GA+ R T A+V+ D +
Sbjct: 145 AIDAMNGMFLNYRK-----IFVGRFKSHKEREAERGAWA----RQSTSADVK-----DFE 190
Query: 151 SDTDEASPVR 160
DTDE + +R
Sbjct: 191 EDTDEEATLR 200
>gi|226498478|ref|NP_001144860.1| uncharacterized protein LOC100277950 [Zea mays]
gi|195648000|gb|ACG43468.1| hypothetical protein [Zea mays]
Length = 254
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 37/224 (16%)
Query: 64 FCQLKYTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKP 123
F LK+ G+ A+ F + +A AL + G F ++ + I+ A++ S K
Sbjct: 58 FKTLKHKGQ-----AWVVFEDVASATEALKRMQGFPFYDKT---MRIQYAKTKSDIIAK- 108
Query: 124 GSGAYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGN 183
G +V ++R +T+ ++ + D AS + +A G +
Sbjct: 109 ADGTFVPRERRKRTDEKSEKKQKREHHHDAG-ASQIGMGVTAYPGVYG------------ 155
Query: 184 AVAPINSEKPYEGG--------VQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-R 234
AP ++ P GG + P + LF+ NL T L+ YPGF ++M
Sbjct: 156 --APQLTQIPIAGGQRVMMPEIIVPNNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMIE 213
Query: 235 ARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYAR 278
A+ G +AF ++ + Q + AM LQ + ++ M I YA+
Sbjct: 214 AKPG--IAFVEYGDETQVTAAMNNLQSFKITKENQ--MVITYAK 253
>gi|68035998|gb|AAY84875.1| alternative splicing regulator [Triticum aestivum]
Length = 254
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELN 96
T++V LP+D+R REI +LF + LK R V AF F + + A A++ +
Sbjct: 8 TIYVGNLPEDIREREIEDLFCKYGPIVDIDLKIPPR-PPVYAFVEFEDPRDADDAIYGRD 66
Query: 97 GVKFDPQSGSVLHIELA 113
G FD G L +ELA
Sbjct: 67 GYDFD---GCKLRVELA 80
>gi|212722122|ref|NP_001131419.1| uncharacterized protein LOC100192748 [Zea mays]
gi|194691466|gb|ACF79817.1| unknown [Zea mays]
Length = 270
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNH 85
+N N LFV LP D RE+ +LFR PGF ++ + +G V+ F F N
Sbjct: 188 SENESNILFVDCLPTDCTRREVAHLFRCFPGFKDIRVVHKEPRRSGDKAYVLCFVEFENA 247
Query: 86 Q---TAVAALHELNGVKFD 101
+ T + AL N V F+
Sbjct: 248 KFARTPMQALQGSNSVSFE 266
>gi|20067397|emb|CAC84501.1| putative nucleolin [Triturus carnifex]
Length = 338
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 199 QPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMP-VAFADFEEVEQASIAME 257
+ TLF+ L + TE+ LK+ G ++ R G F DF E AS A E
Sbjct: 196 EKSKTLFVRGLSADTTEETLKEAFDGAVGTRIVTDRDSGASKGFGFVDFSTAEDASAAKE 255
Query: 258 GLQDSTLPSSDRGGMHIEYARSKMRKL 284
++D + D + +E+A+SK ++
Sbjct: 256 AMEDGEI---DGNKVTVEFAQSKRERV 279
>gi|170581784|ref|XP_001895836.1| RNA binding protein [Brugia malayi]
gi|158597095|gb|EDP35323.1| RNA binding protein, putative [Brugia malayi]
Length = 479
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Query: 29 QQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRG-NQVVAFATFVNHQT 87
QQQ+ L+++ LP + R++ L ++ G G ++ V FA N +
Sbjct: 170 QQQEQDPTNLYLANLPPNYTERDLQKLLESYGSTISTRVLKNGDGSSRCVGFARMDNEEL 229
Query: 88 AVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKP 123
+ E+NG K P L ++ A SN + K +P
Sbjct: 230 CAKIIKEMNGKKIIPGCNLPLMVKYADSNKKTKSRP 265
>gi|308490885|ref|XP_003107634.1| CRE-RSP-3 protein [Caenorhabditis remanei]
gi|308250503|gb|EFO94455.1| CRE-RSP-3 protein [Caenorhabditis remanei]
Length = 262
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
++V LP DVR +E+ ++F + + +K +GRG AF F +H+ A A+ +G
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRIKYIDIK-SGRG-PAFAFVEFEDHRDAEDAVRARDG 68
Query: 98 VKFDPQSGSVLHIEL 112
+FD G + +E
Sbjct: 69 YEFD---GRRIRVEF 80
>gi|359806644|ref|NP_001241278.1| uncharacterized protein LOC100805822 [Glycine max]
gi|255647802|gb|ACU24361.1| unknown [Glycine max]
Length = 232
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
N LF+ LP + R + LF + PGF +L G +AF F + + A+ L
Sbjct: 158 NILFIENLPHETTGRMLEMLFEQYPGFKEVRLIEAKPG---IAFVDFEDEVQSSMAMQAL 214
Query: 96 NGVKFDPQSGSVL 108
+G K PQ+ ++
Sbjct: 215 HGFKITPQNPMII 227
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
P + LFI NL T L+ YPGF +++ A+ G +AF DFE+ Q+S+AM+
Sbjct: 156 PNNILFIENLPHETTGRMLEMLFEQYPGFKEVRLIEAKPG--IAFVDFEDEVQSSMAMQA 213
Query: 259 L 259
L
Sbjct: 214 L 214
>gi|91080449|ref|XP_969323.1| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
gi|270005570|gb|EFA02018.1| hypothetical protein TcasGA2_TC007641 [Tribolium castaneum]
Length = 185
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
++V GL D V+ ++ F + + + + G AF F+NH A +A LNG
Sbjct: 11 VYVGGLTDSVKKEDLETEFEKYGKLNSVWVAFNPPG---FAFIEFINHSDAESACDSLNG 67
Query: 98 VKFDPQSGSVLHIELARSNS 117
F GS L +E+AR S
Sbjct: 68 TDF---LGSKLRVEIARGKS 84
>gi|312078882|ref|XP_003141933.1| RNA binding protein [Loa loa]
Length = 481
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Query: 29 QQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRG-NQVVAFATFVNHQT 87
QQQ+ L+++ LP + R++ L ++ G G ++ V FA N +
Sbjct: 168 QQQEQDPTNLYLANLPPNYTERDLQKLLESYGSTISTRVLKNGDGSSRCVGFARMDNEEL 227
Query: 88 AVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKP 123
+ E+NG K P L ++ A SN + K +P
Sbjct: 228 CAKIIKEMNGKKIIPGCNLPLMVKYADSNKKTKSRP 263
>gi|393912218|gb|EFO22141.2| RNA binding protein [Loa loa]
Length = 483
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Query: 29 QQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRG-NQVVAFATFVNHQT 87
QQQ+ L+++ LP + R++ L ++ G G ++ V FA N +
Sbjct: 170 QQQEQDPTNLYLANLPPNYTERDLQKLLESYGSTISTRVLKNGDGSSRCVGFARMDNEEL 229
Query: 88 AVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKP 123
+ E+NG K P L ++ A SN + K +P
Sbjct: 230 CAKIIKEMNGKKIIPGCNLPLMVKYADSNKKTKSRP 265
>gi|126342328|ref|XP_001373103.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 942
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L + + ++ F C++ G++ F F N Q A
Sbjct: 399 RKSGVGNIFIKNLEKSIDNKALYKTFSAFGNILSCKVISDENGSKGYGFVHFENQQAADK 458
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGA 127
A+ ++NGV+ + L + + R SRK+R+ GA
Sbjct: 459 AIEKMNGVRLNN-----LKVYVGRFKSRKERELELGA 490
>gi|1050840|emb|CAA90282.1| U1snRNP-specific protein, U1A [Solanum tuberosum]
Length = 253
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 107/260 (41%), Gaps = 49/260 (18%)
Query: 37 TLFVSGLPDDVRAREI----HNLFRR----KPGFDFCQLKYTGRGNQVVAFATFVNHQTA 88
T++++ L + ++ E+ H +F + F LK+ G+ A+ F +A
Sbjct: 24 TIYINNLNEKIKLEELKKSMHAVFSQFGKILEVLAFKTLKHKGQ-----AWVVFEEVSSA 78
Query: 89 VAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSAD 148
AL ++ G F + + I+ A++ S K G +V +KR + E
Sbjct: 79 SNALRQMQGFPFYDKP---MRIQYAKTKSDVVAK-ADGTFVPREKRKRHED--------K 126
Query: 149 GDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPC------- 201
G D+ DS G + A + + I PY GG +
Sbjct: 127 GRKKKDQQ------DSNQAGMGLNPAYAGAYGAAPPFSQI----PYMGGAKAAVPEAPAP 176
Query: 202 --STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
S LF+ NL T L+ YPGF ++M A+ G +AF ++ + Q+++AM+
Sbjct: 177 PNSILFVQNLPHQSTPMMLQMLFCQYPGFKEVRMIEAKPG--IAFIEYGDEMQSTVAMQA 234
Query: 259 LQDSTLPSSDRGGMHIEYAR 278
LQ + + + M I YA+
Sbjct: 235 LQGFKITAEN--PMLITYAK 252
>gi|310799153|gb|EFQ34046.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 1112
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 192 KPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVY---PGFNMLKMRARGGMPVAFADFEE 248
K EG ++ L + NL P ED++++ S Y ++L+ +A G A+ + E
Sbjct: 753 KKREGAIEEGRELHVTNLDPLAVEDDVEKAFSKYGTVKRISILRNKAGKGHGAAYVEMET 812
Query: 249 VEQASIAMEGLQDSTLPSS 267
EQA A+ L + L SS
Sbjct: 813 KEQAQTAVSELDKAKLRSS 831
>gi|297304162|ref|XP_002806331.1| PREDICTED: polyadenylate-binding protein 1-like 2-like, partial
[Macaca mulatta]
Length = 249
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L + + ++N+F C++ +G + F F ++A
Sbjct: 134 RKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAER 193
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGD 150
A+ +NG+ + + I + R S K+R+ GA+ R T A+V+ D +
Sbjct: 194 AIDVMNGMFLNYRK-----IFVGRFKSHKEREAERGAWA----RQSTSADVK-----DFE 239
Query: 151 SDTDEASPVR 160
DTDE + +R
Sbjct: 240 EDTDEEATLR 249
>gi|444516866|gb|ELV11302.1| Polyadenylate-binding protein 1-like 2 [Tupaia chinensis]
Length = 200
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L + + ++N+F C++ +G + F F ++A
Sbjct: 85 RKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAER 144
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGD 150
A+ +NG+ + + I + R S K+R+ GA+ R T A+V+ D +
Sbjct: 145 AIDAMNGMFLNYRK-----IFVGRFKSHKEREAERGAWA----RQSTSADVK-----DFE 190
Query: 151 SDTDEASPVR 160
DTDE + +R
Sbjct: 191 DDTDEEATLR 200
>gi|218202488|gb|EEC84915.1| hypothetical protein OsI_32114 [Oryza sativa Indica Group]
gi|222641952|gb|EEE70084.1| hypothetical protein OsJ_30080 [Oryza sativa Japonica Group]
Length = 119
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVAA 91
TL+V GLP + RE+ ++FR GF +L ++ G N ++ F F + A AA
Sbjct: 22 TLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRHAGSCN-LLCFVDFSSPPEARAA 80
Query: 92 LHELNGVKFD 101
L L G KFD
Sbjct: 81 LETLQGYKFD 90
>gi|384251055|gb|EIE24533.1| U1 small nuclear ribonucleo protein A [Coccomyxa subellipsoidea
C-169]
Length = 224
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 196 GGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASI 254
G P LF+ NL T L Y G+ +M AR G +AF +FE+ ++A++
Sbjct: 144 GNAPPHKILFVQNLPEETTSAMLALLFQQYAGYIETRMVEARPG--IAFVEFEDEDKATV 201
Query: 255 AMEGLQDSTLPSSDRGGMHIEYA 277
AM GLQ + +++ I YA
Sbjct: 202 AMAGLQGFKITATN--AFTISYA 222
>gi|380011709|ref|XP_003689940.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein Q-like [Apis florea]
Length = 667
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Query: 191 EKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVE 250
E+P E + L++ NL +C+E++LK++ Y +K AF FEE +
Sbjct: 328 EEPDEQTMSKVRVLYVKNLTQDCSEEKLKESFEQYGNIERVKKIK----DYAFVHFEERD 383
Query: 251 QASIAMEGLQDSTLPSSDRGGMHIEYARSK 280
A AM L + GG HIE + +K
Sbjct: 384 NAVKAMNELNGKEI-----GGSHIEVSLAK 408
>gi|348531623|ref|XP_003453308.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like
[Oreochromis niloticus]
Length = 535
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 109/280 (38%), Gaps = 40/280 (14%)
Query: 22 PPPPYHHQQQDNGINT-LFVSGLPDDVRAREIHNLFRRK-PGFDFCQLKYTGRG-NQVVA 78
PPP H I T +FV +P D+ E+ LF + P +D + G N+ A
Sbjct: 146 PPPESAHSGAQPTIGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLSGLNRGYA 205
Query: 79 FATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTE 138
F TF + A A+ N + P G + + ++ +N+R +V ++KT+
Sbjct: 206 FVTFCTKEAAQQAVKLCNNNEIRP--GKHIGVCISVANNR--------LFVGSIPKSKTK 255
Query: 139 ANVQE--SSSADGDSDT------DEASPVRNIDSADKGDFVTT-QSERATDSGNA----- 184
+ E + +G +D D+ R + D T Q+ R SG
Sbjct: 256 EQIVEEFAKVTEGLNDVILYHQPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGN 315
Query: 185 VAPINSEKPYEG----GVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMP 240
+ + P E + LF+ NL TE+ L++T S + R +
Sbjct: 316 LVTVEWADPIEDPDPEVMAKVKVLFVRNLASTVTEEILEKTFSQHGKLE----RVKKLKD 371
Query: 241 VAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSK 280
AF FEE E A A+ + L D G HIE +K
Sbjct: 372 YAFIHFEERESAVKAL-----TDLNGKDLEGEHIEIVFAK 406
>gi|405968123|gb|EKC33223.1| Splicing factor, arginine/serine-rich 1 [Crassostrea gigas]
Length = 232
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
++V LP D+RAR+I +LF + F LK T RG F F + + A A+HE +G
Sbjct: 9 VYVGNLPPDIRARDIEDLFYKFGKIAFVDLK-TRRGPP-FCFVEFEDPRDASDAVHERDG 66
Query: 98 VKFDPQSGSVLHIE 111
+D G L +E
Sbjct: 67 YNYD---GYTLRVE 77
>gi|215693881|dbj|BAG89080.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 119
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVAA 91
TL+V GLP + RE+ ++FR GF +L ++ G N ++ F F + A AA
Sbjct: 22 TLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRHAGSCN-LLCFVDFSSPPEARAA 80
Query: 92 LHELNGVKFD 101
L L G KFD
Sbjct: 81 LETLQGYKFD 90
>gi|391330558|ref|XP_003739725.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Metaseiulus
occidentalis]
Length = 217
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
++V LP D+R ++I +LF + F LK R AF F + + A A+ +G
Sbjct: 9 VYVGNLPPDIRTKDIEDLFHKYGKITFIDLK--NRRGPPFAFVEFEDPRDAEDAVSARDG 66
Query: 98 VKFDPQSGSVLHIELARSNSRKKR 121
+D G L +E R NS + R
Sbjct: 67 YDYD---GYKLRVEFPRGNSARPR 87
>gi|449513275|ref|XP_004175808.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like, partial
[Taeniopygia guttata]
Length = 99
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
P LF+ NL E L + +PGF +++ G +AF +FE QA A + L
Sbjct: 23 PNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRL-VPGRQDIAFVEFENENQAGAARDAL 81
Query: 260 QDSTLPSSDRGGMHIEYAR 278
Q +P S M I YA+
Sbjct: 82 QGFKIPPSH--AMKITYAK 98
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
LF++ LP++ + LF + PGF +L G Q +AF F N A AA L G
Sbjct: 27 LFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRQDIAFVEFENENQAGAARDALQG 83
Query: 98 VKFDP 102
K P
Sbjct: 84 FKIPP 88
>gi|196000456|ref|XP_002110096.1| hypothetical protein TRIADDRAFT_53710 [Trichoplax adhaerens]
gi|190588220|gb|EDV28262.1| hypothetical protein TRIADDRAFT_53710 [Trichoplax adhaerens]
Length = 317
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
L VS +P R ++ N+F R + ++ + RG++ F TF+N + A A +++G
Sbjct: 131 LHVSNIPFRYRDGDLRNMFERFGNIEDVEIIFNERGSKGFGFVTFINPEDAKGAKEDIHG 190
Query: 98 VKFDPQSGSVLHIELA 113
D G +L + A
Sbjct: 191 KSVD---GRILEVNYA 203
>gi|395859649|ref|XP_003802146.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 2 [Otolemur
garnettii]
Length = 231
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 81/202 (40%), Gaps = 27/202 (13%)
Query: 78 AFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVID-KRTK 136
AF F +A AL + G F + + I+ A+++S K G +V D KR K
Sbjct: 55 AFVIFKEVSSATNALRSMQGFPFYDKP---MRIQYAKTDSDIIAK-MKGTFVERDRKREK 110
Query: 137 TEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEG 196
+ QE+ SA A+PV G API S + E
Sbjct: 111 RKPKSQETPSAKKAVQGGAAAPVV-----------------GAVQGPVPAPILSWQLSEN 153
Query: 197 GVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAM 256
P LF+ NL E L + +PGF +++ G +AF +F+ QA A
Sbjct: 154 --PPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRL-VPGRHDIAFVEFDNEVQAGAAR 210
Query: 257 EGLQDSTLPSSDRGGMHIEYAR 278
+ LQ + ++ M I +A+
Sbjct: 211 DALQGFKITQNN--AMKISFAK 230
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 20 PVPPPPYHHQQQDNGIN-TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVA 78
PVP P Q +N N LF++ LP++ + LF + PGF +L GR + +A
Sbjct: 140 PVPAPILSWQLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRL-VPGRHD--IA 196
Query: 79 FATFVNHQTAVAALHELNGVK 99
F F N A AA L G K
Sbjct: 197 FVEFDNEVQAGAARDALQGFK 217
>gi|242086969|ref|XP_002439317.1| hypothetical protein SORBIDRAFT_09g004270 [Sorghum bicolor]
gi|241944602|gb|EES17747.1| hypothetical protein SORBIDRAFT_09g004270 [Sorghum bicolor]
Length = 259
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 106/267 (39%), Gaps = 50/267 (18%)
Query: 33 NGIN---TLFVSGLPDDVRAREIHNLF--------RRKPGFDFCQLKYTGRGNQVVAFAT 81
NG+ T++++ L + ++ E+ + F LK+ G+ A+
Sbjct: 23 NGVQPNVTIYINNLNEKIKLEELKKSLTAVFSQFGKILDVLAFKTLKHKGQ-----AWVV 77
Query: 82 FVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANV 141
F + +A AL + G F ++ + I+ A++ S K G +V ++R + +
Sbjct: 78 FEDVASATEALKRMQGFPFYDKT---MRIQYAKTKSDIVAK-ADGTFVPRERRKRVDEKP 133
Query: 142 QESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGG---- 197
++ + D + N G AP ++ P GG
Sbjct: 134 EKKQKREHHHDASQIGMGVNAYPGVYG-----------------APQLTQIPIAGGQRVI 176
Query: 198 ----VQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQA 252
+ P + LF+ NL T L+ YPGF ++M A+ G +AF ++ + QA
Sbjct: 177 MPEIIVPNNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAKPG--IAFVEYGDEGQA 234
Query: 253 SIAMEGLQDSTLPSSDRGGMHIEYARS 279
+ AM LQ + ++ M I YA+
Sbjct: 235 TAAMNNLQSFKITKENQ--MVITYAKK 259
>gi|392597982|gb|EIW87304.1| RNA binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 263
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 109/264 (41%), Gaps = 36/264 (13%)
Query: 24 PPYHHQQQDNGINTLFVSGLPD----DVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAF 79
PP ++ +N TL++ L + DV + + +LF+ G + ++ + AF
Sbjct: 26 PPTASEEPENVSETLYIQNLNEKIKVDVIKQSLRSLFKTY-GEVLDVVAHSNLRMRGQAF 84
Query: 80 ATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEA 139
+F + + A A+ E+ G P + I ARS S V+ K
Sbjct: 85 VSFESPEVAKKAMEEVRGF---PLYNKPMQISFARSRSD----------AVVKKLDAEHF 131
Query: 140 NVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATD-SGNAVAPI----NSEKPY 194
+ ++ + +T +P++ A + ATD G A AP N + P
Sbjct: 132 DAHKAQRDEHKKNTRYTNPLKQKLRAKR---------MATDIDGAAAAPAVKRPNVQMPD 182
Query: 195 EGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASI 254
E + P LF+ NL N +++L + YP + +++ +AF +F + A +
Sbjct: 183 EY-LPPNKILFLQNLPENVDKEQLTTLFTQYPNLHEVRL-IPTKKDIAFVEFVDEASAGV 240
Query: 255 AMEGLQDSTLPSSDRGGMHIEYAR 278
A + L + L ++ + I +AR
Sbjct: 241 AKDALHNYKLDGENK--IKITFAR 262
>gi|293333676|ref|NP_001169386.1| uncharacterized protein LOC100383254 [Zea mays]
gi|224029017|gb|ACN33584.1| unknown [Zea mays]
gi|414866361|tpg|DAA44918.1| TPA: hypothetical protein ZEAMMB73_448604 [Zea mays]
Length = 233
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
P + LFI NL T L+ YPGF ++M A+ G +AF +FE+ Q+ +AM+
Sbjct: 157 PNNILFIQNLPDQTTSMMLQILFQQYPGFREVRMIEAKPG--IAFVEFEDDGQSMVAMQA 214
Query: 259 LQDSTLPSSDRGGMHIEYAR 278
LQ + + M I YA+
Sbjct: 215 LQGFKI--TPENPMAISYAK 232
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 14/86 (16%)
Query: 19 PPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVA 78
PP PP N LF+ LPD + + LF++ PGF ++ G +A
Sbjct: 153 PPAPPN-----------NILFIQNLPDQTTSMMLQILFQQYPGFREVRMIEAKPG---IA 198
Query: 79 FATFVNHQTAVAALHELNGVKFDPQS 104
F F + ++ A+ L G K P++
Sbjct: 199 FVEFEDDGQSMVAMQALQGFKITPEN 224
>gi|27469824|gb|AAH41956.1| PABPC1L2B protein [Homo sapiens]
Length = 243
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L + + ++N+F C++ +G + F F ++A
Sbjct: 128 RKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAER 187
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGD 150
A+ +NG+ + + I + R S K+R+ GA+ R T A+V+ D +
Sbjct: 188 AIDVMNGMFLNYRK-----IFVGRFKSHKEREAERGAWA----RQSTSADVK-----DFE 233
Query: 151 SDTDEASPVR 160
DTDE + +R
Sbjct: 234 EDTDEEATLR 243
>gi|68037673|gb|AAY84884.1| alternative splicing regulator [Triticum aestivum]
Length = 284
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELN 96
T++V LP D+R RE+ +LF + LK R AF F + + A A+H +
Sbjct: 8 TIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPG-FAFVEFEDPRDAEDAIHGRD 66
Query: 97 GVKFDPQSGSVLHIELA---RSNS 117
G FD G+ L +ELA R+NS
Sbjct: 67 GYNFD---GNRLRVELAHGGRANS 87
>gi|393215680|gb|EJD01171.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 268
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 14/93 (15%)
Query: 196 GGVQPCSTLFIANLGPNCTEDEL-KQTLSVYPGFNML-------KMRARGGMPVAFADFE 247
G + P TL++ NL +DEL KQ S + + + R +G V FAD
Sbjct: 3 GAIAPNPTLYVNNLNDKINKDELKKQLFSFFTTYGRVIDIIAIKSARMKGQAFVVFADLP 62
Query: 248 EVEQASIAMEGLQDSTLPSSDRGGMHIEYARSK 280
E A A EG+ P +HI YA+SK
Sbjct: 63 EATTAMRACEGMIFYDKP------LHIHYAKSK 89
>gi|339234953|ref|XP_003379031.1| RNA-binding protein 47 [Trichinella spiralis]
gi|316978381|gb|EFV61375.1| RNA-binding protein 47 [Trichinella spiralis]
Length = 567
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 99/266 (37%), Gaps = 40/266 (15%)
Query: 22 PPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRG-NQVVAFA 80
PPPP + +FV LP DV +E+ +F R ++ G N+ AF
Sbjct: 78 PPPPKGCE--------VFVGKLPRDVTEQELVPVFERVGRIYEMRMMMDFNGSNRGYAFV 129
Query: 81 TFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEAN 140
TF + + A A +LNG F+ + G + + + N R YV R K+ +
Sbjct: 130 TFCDKEQAKRACQQLNG--FEIRRGRFIGVLKSVDNCR--------LYVSGIPRDKSRED 179
Query: 141 VQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSE---------------RATDSGNAV 185
V+ + D D +D + F + E R T GN +
Sbjct: 180 VRSEIARLTDGVVDVILYPSAMDKSKNRGFAFIEYESHRSAAMARRKLAPNRLTLWGNEI 239
Query: 186 APINSEKPY----EGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPV 241
++ +P E + L++ NL + TE+ L++ + G ++ R +
Sbjct: 240 T-VDWAEPERDVDEETMAQVKKLYVRNLMMHTTEEHLREVVEAISGTGTVE-RVKKIRDY 297
Query: 242 AFADFEEVEQASIAMEGLQDSTLPSS 267
AF F E A E L L S
Sbjct: 298 AFVHFSRREDAIRVQEALNGQDLDGS 323
>gi|118396628|ref|XP_001030652.1| U1 small nuclear ribonucleoprotein A [Tetrahymena thermophila]
gi|89284963|gb|EAR82989.1| U1 small nuclear ribonucleoprotein A [Tetrahymena thermophila
SB210]
Length = 270
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 199 QPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEG 258
QP + L + +L T D LK YPGF ++R VAF +F + ++A++A+ G
Sbjct: 194 QPNNVLILEDLPSFVTTDILKALFGQYPGFK--EVRLIAPRKVAFVEFSQEDEATVALNG 251
Query: 259 LQDSTLPSSDRGGMHIEYAR 278
LQ+ L + + + + YA+
Sbjct: 252 LQNFQL--TPQVFLKLNYAK 269
>gi|356573171|ref|XP_003554737.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Glycine max]
Length = 241
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
N LF+ LP+D + LF + PGF ++ T G +AF + + + A+ L
Sbjct: 167 NILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETKPG---IAFVEYGDEMQSTVAMQTL 223
Query: 96 NGVKFDPQS 104
G K PQ+
Sbjct: 224 QGFKITPQN 232
Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
P + LFI NL + T L+ YPGF ++M + G +AF ++ + Q+++AM+
Sbjct: 165 PNNILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETKPG--IAFVEYGDEMQSTVAMQT 222
Query: 259 LQDSTLPSSDRGGMHIEYAR 278
LQ + + + M I YA+
Sbjct: 223 LQGFKI--TPQNPMLITYAK 240
>gi|219888851|gb|ACL54800.1| unknown [Zea mays]
gi|414589690|tpg|DAA40261.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 322
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 195 EGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASI 254
+GG +T+F+ L P+ +E++L+Q S Y + +K+ G F F + + A
Sbjct: 179 DGGDLTNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPV--GKQCGFVQFAQRKNAED 236
Query: 255 AMEGLQDSTL 264
A++GL ST+
Sbjct: 237 ALQGLNGSTI 246
>gi|255647418|gb|ACU24174.1| unknown [Glycine max]
Length = 241
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 12/86 (13%)
Query: 19 PPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVA 78
P P PP N LF+ LP+D + LF + PGF ++ T G +A
Sbjct: 159 PEAPAPPN---------NILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETKPG---IA 206
Query: 79 FATFVNHQTAVAALHELNGVKFDPQS 104
F + + + A+ L G K PQ+
Sbjct: 207 FVEYGDEMQSTVAMQTLQGFKITPQN 232
Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
P + LFI NL + T L+ YPGF ++M + G +AF ++ + Q+++AM+
Sbjct: 165 PNNILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETKPG--IAFVEYGDEMQSTVAMQT 222
Query: 259 LQDSTLPSSDRGGMHIEYAR 278
LQ + + + M I YA+
Sbjct: 223 LQGFKI--TPQNPMLITYAK 240
>gi|25150290|ref|NP_499649.2| Protein RSP-3 [Caenorhabditis elegans]
gi|56749665|sp|Q9NEW6.2|RSP3_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 3;
AltName: Full=CeSF2; AltName: Full=CeSF2/ASF
gi|21615505|emb|CAC35847.2| Protein RSP-3 [Caenorhabditis elegans]
Length = 258
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
++V LP DVR +E+ ++F + + +K +GRG AF F +H+ A A+ +G
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRIKYVDIK-SGRG-PAFAFVEFEDHRDAEDAVRARDG 68
Query: 98 VKFDPQSGSVLHIEL 112
+FD G + +E
Sbjct: 69 YEFD---GRRIRVEF 80
>gi|321265410|ref|XP_003197421.1| RNA binding protein [Cryptococcus gattii WM276]
gi|317463901|gb|ADV25634.1| RNA binding protein, putative [Cryptococcus gattii WM276]
Length = 286
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 106/241 (43%), Gaps = 38/241 (15%)
Query: 32 DNGINTLFVSGLPDDVR----AREIHNLFR----RKPGFDFCQLKYTGRGNQVVAFATFV 83
DN TL++ L + VR ++NLF+ +P ++ G+ AF +F
Sbjct: 55 DNACETLYLQNLNEKVRIPVMKETLYNLFKPYRPLQPIIAHHNIRMRGQ-----AFISFP 109
Query: 84 NHQTAVAALHELNGVKFDPQSGSVLHIELAR--SNSRKKRKPGSGAYVVIDKRTKTEANV 141
+ ++A A ++N P G + I+ A+ S+S KRK + +R E +
Sbjct: 110 DIESANEARKDVNEF---PLYGKSVQIKFAKGLSDSIVKRKGDEKEFEEHTRRRLEEKKL 166
Query: 142 QESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPC 201
+ ++ P+R + +K TT A +G A + P E + P
Sbjct: 167 KRKNN-----------PLRQ-KAQEKLRADTT----AGTTGPAAKKQRLQMPDEY-LPPN 209
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR-GGMPVAFADFEEVEQASIAMEGLQ 260
S LF+ NL T ++L++ V+PG ++++R +AF +F + A++A + L
Sbjct: 210 SVLFVQNLPDGTTSEDLREVFEVHPG--LIEIRTIPAKKDIAFVEFADEGAATVAKDALH 267
Query: 261 D 261
+
Sbjct: 268 N 268
>gi|395863403|ref|XP_003803885.1| PREDICTED: polyadenylate-binding protein 1-like 2-like, partial
[Otolemur garnettii]
Length = 203
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 14/130 (10%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L + + ++N+F C++ +G + F F ++A
Sbjct: 88 RKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAER 147
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGD 150
A+ +NG+ + + I + R S K+R+ GA+ R T A+V+ D +
Sbjct: 148 AIDAMNGMFLNYRK-----IFVGRFKSHKEREAERGAWA----RQSTSADVK-----DFE 193
Query: 151 SDTDEASPVR 160
DTDE + R
Sbjct: 194 EDTDEEATFR 203
>gi|303281170|ref|XP_003059877.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458532|gb|EEH55829.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 224
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
LFV GLP+ A + LF++ PGF ++ G +AF F A AL L G
Sbjct: 152 LFVQGLPEATTAAMLSMLFQQFPGFKEVRMVEAKPG---IAFVEFTAETQASVALQGLQG 208
Query: 98 VKFDPQSGSVL 108
K +P L
Sbjct: 209 FKINPTHSMTL 219
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 57/140 (40%), Gaps = 11/140 (7%)
Query: 122 KPGSGAYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDS 181
KP AY + K++A + + D + EA R S + A
Sbjct: 78 KPMKLAYA----KAKSDATAKLDGTYDPSARDPEARAKRKAASQAEEKASQAAKAEAEAR 133
Query: 182 GNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMP 240
G API ++ P LF+ L T L +PGF ++M A+ G
Sbjct: 134 GGGSAPIRTDP----SAPPNEILFVQGLPEATTAAMLSMLFQQFPGFKEVRMVEAKPG-- 187
Query: 241 VAFADFEEVEQASIAMEGLQ 260
+AF +F QAS+A++GLQ
Sbjct: 188 IAFVEFTAETQASVALQGLQ 207
>gi|159163849|pdb|2CPX|A Chain A, Solution Structure Of Rna Binding Domain In Hypothetical
Protein Flj11016
Length = 115
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Query: 37 TLFVSGLPDDVRAREIHNLF-----RRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
L++ L V R++ +LF ++ P F + RG AF TF N + A A
Sbjct: 27 VLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQ---AFITFPNKEIAWQA 83
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSG 126
LH +NG K G +L IE ++ ++ P SG
Sbjct: 84 LHLVNGYKL---YGKILVIEFGKNKKQRSSGPSSG 115
>gi|50286073|ref|XP_445465.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524770|emb|CAG58376.1| unnamed protein product [Candida glabrata]
Length = 301
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 195 EGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASI 254
E V+P S L + +L CT D++K + P + ++R VAF ++E++E A++
Sbjct: 222 EKLVEPNSILLLTDLPSGCTSDQIKVNI---PTKELKEIRLVSVRNVAFVEYEDIEAATV 278
Query: 255 AMEGLQDSTLPSSDRGGMHIEYARSK 280
A++ + +P + G +I+ +K
Sbjct: 279 ALKEM----VPKLTKLGNNIKVTYAK 300
>gi|108707670|gb|ABF95465.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 231
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
P + LFI NL T L+ YPGF ++M A+ G +AF ++E+ Q+ +AM+
Sbjct: 155 PNNILFIQNLPAETTSMMLQILFQQYPGFREVRMIEAKPG--IAFVEYEDDSQSMVAMQA 212
Query: 259 LQDSTLPSSDRGGMHIEYAR 278
LQ + + M I YA+
Sbjct: 213 LQGFKI--TPYNPMAISYAK 230
>gi|115459200|ref|NP_001053200.1| Os04g0496400 [Oryza sativa Japonica Group]
gi|38345380|emb|CAE03112.2| OSJNBa0067K08.9 [Oryza sativa Japonica Group]
gi|113564771|dbj|BAF15114.1| Os04g0496400 [Oryza sativa Japonica Group]
gi|125590877|gb|EAZ31227.1| hypothetical protein OsJ_15326 [Oryza sativa Japonica Group]
Length = 476
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 32 DNGINT-LFVSGLPDDVRAREIHNLFR-----------RKPGFDFCQLKYTGRGNQVVAF 79
D +NT ++V+GLPDDV A EI +F RKP + TGR + A
Sbjct: 227 DLKVNTHVYVTGLPDDVTAEEIVEVFSKCGIIKEDPETRKPRVKIYTDRETGR-KKGDAL 285
Query: 80 ATFVNHQTAVAALHELNGVKFDPQSGSVLHIELAR 114
T++ + A+ L+G F P +++ + A+
Sbjct: 286 VTYLKEPSVALAIQLLDGTSFRPGGKTLMSVSPAK 320
>gi|61175237|ref|NP_001012995.1| polyadenylate-binding protein 1-like 2 [Homo sapiens]
gi|109948285|ref|NP_001035971.1| polyadenylate-binding protein 1-like 2 [Homo sapiens]
gi|402910552|ref|XP_003917938.1| PREDICTED: polyadenylate-binding protein 1-like 2 [Papio anubis]
gi|426396426|ref|XP_004064444.1| PREDICTED: polyadenylate-binding protein 1-like 2 [Gorilla gorilla
gorilla]
gi|74755614|sp|Q5JQF8.1|PAP1M_HUMAN RecName: Full=Polyadenylate-binding protein 1-like 2; AltName:
Full=RNA-binding motif protein 32; AltName:
Full=RNA-binding protein 32
gi|119619077|gb|EAW98671.1| hCG1811470 [Homo sapiens]
gi|187951483|gb|AAI36493.1| PABPC1L2A protein [Homo sapiens]
gi|261861056|dbj|BAI47050.1| poly(A) binding protein, cytoplasmic 1-like 2A [synthetic
construct]
gi|355704922|gb|EHH30847.1| RNA-binding protein 32 [Macaca mulatta]
gi|355767263|gb|EHH62597.1| RNA-binding protein 32 [Macaca fascicularis]
gi|380784435|gb|AFE64093.1| polyadenylate-binding protein 1-like 2 [Macaca mulatta]
Length = 200
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L + + ++N+F C++ +G + F F ++A
Sbjct: 85 RKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAER 144
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGD 150
A+ +NG+ + + I + R S K+R+ GA+ R T A+V+ D +
Sbjct: 145 AIDVMNGMFLNYRK-----IFVGRFKSHKEREAERGAWA----RQSTSADVK-----DFE 190
Query: 151 SDTDEASPVR 160
DTDE + +R
Sbjct: 191 EDTDEEATLR 200
>gi|168053933|ref|XP_001779388.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669186|gb|EDQ55778.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 650
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 101/247 (40%), Gaps = 32/247 (12%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRK---PGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALH 93
+L+V L +V +++ LF + C+ T R + +A +VN+ +A A
Sbjct: 29 SLYVGDLEPNVSEAQLYELFTQVGQVVSIRVCRDLITRRS---LGYA-YVNYNSAQDATR 84
Query: 94 ELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDT 153
L + F +G+ + I + + ++ + ++ +T + ++ SA G +
Sbjct: 85 ALELLNFSVLNGNPIRIMFSHRDPSIRKSGTANIFIKNLDKTIDNKALHDTFSAFGGILS 144
Query: 154 DEASPVRNID-SADKGDFVTTQSERATDSGNAVAPIN-----------------SEKPYE 195
+ + +D S + Q E+ + A+ +N E+
Sbjct: 145 CKVA----VDGSGQSKGYGFVQFEQEESALTAIEKVNGMLLNDKQVFVGPFVRRQERDQS 200
Query: 196 GGVQPCSTLFIANLGPNCTEDELKQTLSVYPGF-NMLKMRARGGMP--VAFADFEEVEQA 252
GGV + +++ NLG N TED+LK Y + + MR G F +FE + A
Sbjct: 201 GGVSKFNNVYVKNLGENTTEDDLKNVFGAYGTISSAVVMRDSDGKSKCFGFVNFEHPDNA 260
Query: 253 SIAMEGL 259
+ A+E L
Sbjct: 261 AKAVEAL 267
>gi|116310691|emb|CAH67490.1| H0306B06.5 [Oryza sativa Indica Group]
gi|116310709|emb|CAH67506.1| OSIGBa0092E01.1 [Oryza sativa Indica Group]
gi|125548880|gb|EAY94702.1| hypothetical protein OsI_16479 [Oryza sativa Indica Group]
Length = 476
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 32 DNGINT-LFVSGLPDDVRAREIHNLFR-----------RKPGFDFCQLKYTGRGNQVVAF 79
D +NT ++V+GLPDDV A EI +F RKP + TGR + A
Sbjct: 227 DLKVNTHVYVTGLPDDVTAEEIVEVFSKCGIIKEDPETRKPRVKIYTDRETGR-KKGDAL 285
Query: 80 ATFVNHQTAVAALHELNGVKFDPQSGSVLHIELAR 114
T++ + A+ L+G F P +++ + A+
Sbjct: 286 VTYLKEPSVALAIQLLDGTSFRPGGKTLMSVSPAK 320
>gi|357121520|ref|XP_003562467.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 288
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELN 96
T++V LP D+R RE+ +LF + LK R AF F + + A A+H +
Sbjct: 8 TIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPR-PPGFAFVEFEDPRDAEDAIHGRD 66
Query: 97 GVKFDPQSGSVLHIELA---RSNS 117
G FD G+ L +ELA R+NS
Sbjct: 67 GYNFD---GNRLRVELAHGGRANS 87
>gi|356526987|ref|XP_003532096.1| PREDICTED: protein MEI2-like 2-like [Glycine max]
Length = 856
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 183 NAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNML--KMRARGGMP 240
N V + E PY G P TLF+ N+ N + EL+ +Y L + RG +
Sbjct: 182 NGVGTVAGEHPY--GEHPSRTLFVRNINSNVEDSELRTLFELYGDIRTLYTACKHRGFVM 239
Query: 241 VAFADFEEVEQASIAMEGLQDSTL 264
+++ D + A AM LQ+ L
Sbjct: 240 ISYYD---IRAARTAMRALQNKPL 260
>gi|302844343|ref|XP_002953712.1| hypothetical protein VOLCADRAFT_106063 [Volvox carteri f.
nagariensis]
gi|300261121|gb|EFJ45336.1| hypothetical protein VOLCADRAFT_106063 [Volvox carteri f.
nagariensis]
Length = 500
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Query: 38 LFV---SGLPDDVRAREIHNLFRRKPGFDFCQLK---YTGRGNQVVAFATFVNHQTAVAA 91
LFV + DV AR LFR+ G ++C LK TGR ++ F + + A A
Sbjct: 312 LFVVVHKSVTQDVLAR----LFRKFNGMEYCDLKKDPATGR-SKGFCFVNYSTPEAAATA 366
Query: 92 LHELNGVKFDPQSGSVLHIELA 113
+ +LNG++F P S L + A
Sbjct: 367 VAQLNGIEFPPHSNQRLKVMFA 388
>gi|341889616|gb|EGT45551.1| hypothetical protein CAEBREN_06053 [Caenorhabditis brenneri]
Length = 260
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
++V LP DVR +E+ ++F + + +K +GRG AF F +H+ A A+ +G
Sbjct: 12 VYVGNLPGDVRDKEVEDIFHKYGRIKYIDIK-SGRG-PAFAFVEFEDHRDAEDAVRARDG 69
Query: 98 VKFDPQSGSVLHIEL 112
+FD G + +E
Sbjct: 70 YEFD---GRRIRVEF 81
>gi|384950746|sp|B8AM21.1|RU2B_ORYSI RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|218192634|gb|EEC75061.1| hypothetical protein OsI_11177 [Oryza sativa Indica Group]
Length = 232
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
P + LFI NL T L+ YPGF ++M A+ G +AF ++E+ Q+ +AM+
Sbjct: 156 PNNILFIQNLPAETTSMMLQILFQQYPGFREVRMIEAKPG--IAFVEYEDDSQSMVAMQA 213
Query: 259 LQDSTLPSSDRGGMHIEYAR 278
LQ + + M I YA+
Sbjct: 214 LQGFKI--TPYNPMAISYAK 231
>gi|297843490|ref|XP_002889626.1| hypothetical protein ARALYDRAFT_887900 [Arabidopsis lyrata subsp.
lyrata]
gi|297335468|gb|EFH65885.1| hypothetical protein ARALYDRAFT_887900 [Arabidopsis lyrata subsp.
lyrata]
Length = 243
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 99/248 (39%), Gaps = 43/248 (17%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFAT----------FVNHQ 86
++++ + + ++ E+ +C + GR VVA T F
Sbjct: 11 SIYIKNINEKIKKEELKRSL-------YCLFSHFGRILDVVALKTPKLRGQAWVVFTQVT 63
Query: 87 TAVAALHELNGVKFDPQSGSVL--HIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQES 144
A A+ ++ F S++ I+ A+S S K G +V +K+ K E V+
Sbjct: 64 AASNAVLQMQNFPFYDTFSSLMFQRIQYAKSKSDYVTK-AQGTFVPKEKKMKQEDKVERK 122
Query: 145 SSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTL 204
A+ +T + S + T +G V P + + P + L
Sbjct: 123 RHAE---ETQQPS---------------MPNGATTQNGMPVPPFQPSG--QDTMPPNNIL 162
Query: 205 FIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEGLQDST 263
FI NL T L+ Y GF ++M A+ G +AF ++E+ Q+S+AM+ LQ
Sbjct: 163 FIHNLPIEMTSMMLQLLFEQYTGFKEIRMIEAKPG--IAFVEYEDDVQSSMAMQALQGFQ 220
Query: 264 LPSSDRGG 271
S++ G
Sbjct: 221 DHSTESNG 228
>gi|115452491|ref|NP_001049846.1| Os03g0298800 [Oryza sativa Japonica Group]
gi|122247158|sp|Q10MR0.1|RU2B_ORYSJ RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|108707669|gb|ABF95464.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548317|dbj|BAF11760.1| Os03g0298800 [Oryza sativa Japonica Group]
gi|215737098|dbj|BAG96027.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624757|gb|EEE58889.1| hypothetical protein OsJ_10509 [Oryza sativa Japonica Group]
Length = 232
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
P + LFI NL T L+ YPGF ++M A+ G +AF ++E+ Q+ +AM+
Sbjct: 156 PNNILFIQNLPAETTSMMLQILFQQYPGFREVRMIEAKPG--IAFVEYEDDSQSMVAMQA 213
Query: 259 LQDSTLPSSDRGGMHIEYAR 278
LQ + + M I YA+
Sbjct: 214 LQGFKI--TPYNPMAISYAK 231
>gi|414589689|tpg|DAA40260.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 424
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 195 EGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASI 254
+GG +T+F+ L P+ +E++L+Q S Y + +K+ G F F + + A
Sbjct: 281 DGGDLTNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPV--GKQCGFVQFAQRKNAED 338
Query: 255 AMEGLQDSTL 264
A++GL ST+
Sbjct: 339 ALQGLNGSTI 348
>gi|162312303|ref|NP_596601.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe
972h-]
gi|26401571|sp|O60176.2|YG41_SCHPO RecName: Full=Uncharacterized RNA-binding protein C23E6.01c
gi|157310462|emb|CAB83010.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe]
Length = 473
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 18/107 (16%)
Query: 1 MAHPPYDPYYLPPIHPPPPPVPPPPYHHQQQ------DNGINTLFVSGLPDDVRAREIHN 54
+A P + P++ P +PP ++ Q D +T+FV GL V E+
Sbjct: 262 LATPKSKAHVFSPVNVVPVSMPPVGFYSAAQPVPQFADTANSTVFVGGLSKFVSEEELKY 321
Query: 55 LFRRKPGFDFCQLKYT----GRGNQVVAFATFVNHQTAVAALHELNG 97
LF+ +F ++ Y G+G F FVN Q+A A+++L G
Sbjct: 322 LFQ-----NFGEIVYVKIPPGKG---CGFVQFVNRQSAEIAINQLQG 360
>gi|359081870|ref|XP_003588203.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like 2A [Bos
taurus]
gi|395862938|ref|XP_003803673.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Otolemur
garnettii]
Length = 200
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 14/130 (10%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L + + ++N+F C++ +G + F F ++A
Sbjct: 85 RKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAER 144
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGD 150
A+ +NG+ + + I + R S K+R+ GA+ R T A+V+ D +
Sbjct: 145 AIDAMNGMFLNYRK-----IFVGRFKSHKEREAERGAWA----RQSTSADVK-----DFE 190
Query: 151 SDTDEASPVR 160
DTDE + R
Sbjct: 191 EDTDEEATFR 200
>gi|328873787|gb|EGG22153.1| hypothetical protein DFA_04271 [Dictyostelium fasciculatum]
Length = 826
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 189 NSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEE 248
N +P E L++ N+G + TE+ELK SVY ++ +R AF +F++
Sbjct: 569 NGSEPNEIDEHASRVLWVGNIGLDVTEEELKTEFSVYG--DLESVRILHDRFCAFVNFKD 626
Query: 249 VEQASIAMEGLQDSTLPS 266
AS+A + + + + S
Sbjct: 627 TSHASLAKKNMHNQVIGS 644
>gi|119923699|ref|XP_599343.3| PREDICTED: poly(A) binding protein, cytoplasmic 1-like 2A [Bos
taurus]
gi|297493007|ref|XP_002700050.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like 2A [Bos
taurus]
gi|358420984|ref|XP_003584787.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like 2A [Bos
taurus]
gi|296470850|tpg|DAA12965.1| TPA: PABPC1L2B protein-like [Bos taurus]
gi|440892195|gb|ELR45496.1| Polyadenylate-binding protein 1-like 2 [Bos grunniens mutus]
Length = 200
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 14/130 (10%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L + + ++N+F C++ +G + F F ++A
Sbjct: 85 RKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAER 144
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGD 150
A+ +NG+ + + I + R S K+R+ GA+ R T A+V+ D +
Sbjct: 145 AIDAMNGMFLNYRK-----IFVGRFKSHKEREAERGAWA----RQSTSADVK-----DFE 190
Query: 151 SDTDEASPVR 160
DTDE + R
Sbjct: 191 EDTDEEATFR 200
>gi|449280001|gb|EMC87413.1| U2 small nuclear ribonucleoprotein B'' [Columba livia]
Length = 226
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 99/248 (39%), Gaps = 36/248 (14%)
Query: 37 TLFVSGLPDDVRAREI-HNLFRRKPGF----DFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
T++++ + D ++ E+ +L+ F D LK Q AF F ++ A
Sbjct: 8 TIYINNINDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQ--AFVIFKELGSSTNA 65
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKRKP-GSGAYVVIDKRTKTEANVQESSSADGD 150
L +L G F G + I+ A+++S K G+ A K K ++++S++A
Sbjct: 66 LRQLQGFPF---YGKPMRIQYAKTDSDIISKMRGTFADKEKRKEKKKAKSLEQSANAANK 122
Query: 151 SDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLG 210
A+P + S T + N P N P LF+ NL
Sbjct: 123 KVIQGATP-------------NSASAPGTAAQNQQVPDNP---------PNYILFLNNLP 160
Query: 211 PNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRG 270
E L + +PGF +++ G +AF +FE QA A + LQ + S
Sbjct: 161 EETNEMMLSMLFNQFPGFKEVRL-VPGRHDIAFVEFENENQAGAARDALQGFKITPSH-- 217
Query: 271 GMHIEYAR 278
M I YA+
Sbjct: 218 AMKITYAK 225
>gi|342180349|emb|CCC89826.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 292
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 12/101 (11%)
Query: 189 NSEKPYEGGVQPCS-----TLFIANLGPNCTEDELKQTLSVY----PGFNMLKMRARGGM 239
N + P G +P LFI NL P E LK+ S Y M + G +
Sbjct: 6 NQKSPTTGNRRPHEFYSRDNLFICNLSPGVDESALKRIFSAYGEIVSAAVMRNIHTGGSL 65
Query: 240 PVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSK 280
AF F EQA AME L S + M +++A+ +
Sbjct: 66 GTAFVRFAATEQAQRAMEALTGSM---QEGRAMIVQWAKRQ 103
>gi|330842469|ref|XP_003293200.1| hypothetical protein DICPUDRAFT_83777 [Dictyostelium purpureum]
gi|325076492|gb|EGC30273.1| hypothetical protein DICPUDRAFT_83777 [Dictyostelium purpureum]
Length = 233
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 27/184 (14%)
Query: 78 AFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKT 137
AF F + +A AL E+NG F + + I+ +++ S K G Y+ KR +
Sbjct: 59 AFIVFKDITSASNALREMNGFNFLDRP---MKIQYSKNKSDAVSKL-DGTYME-KKRQRE 113
Query: 138 EANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGG 197
E N ++ + D +N ++ G+ + R
Sbjct: 114 ENNEKKINIKKQDRKVTGGQKNKNGETLSVGNIPSNLQPR-------------------D 154
Query: 198 VQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAM 256
+ P TLF+ NL C L+ S +PG+ + M ++ G +AF +F++ ++ +AM
Sbjct: 155 LPPNKTLFVENLPDKCDPMMLEMLFSQFPGYKEVHMVESKKG--IAFVEFQDESKSGLAM 212
Query: 257 EGLQ 260
+ LQ
Sbjct: 213 QSLQ 216
>gi|296004548|ref|XP_001351730.2| splicing factor, putative [Plasmodium falciparum 3D7]
gi|225631680|emb|CAD51537.2| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 298
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
++ ++V LP V +R++ N FR+ C +K T G AF F + + A A+ E
Sbjct: 7 VSRIYVGNLPSHVSSRDVENEFRKYGNILKCDVKKTVSG-AAFAFIEFEDARDAADAIKE 65
Query: 95 LNGVKFDPQSGSVLHIEL---ARSNSR 118
+G F+ G+ L +E+ AR N R
Sbjct: 66 KDGCDFE---GNKLRVEVPFNARENGR 89
>gi|238590077|ref|XP_002392208.1| hypothetical protein MPER_08250 [Moniliophthora perniciosa FA553]
gi|215457941|gb|EEB93138.1| hypothetical protein MPER_08250 [Moniliophthora perniciosa FA553]
Length = 322
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLK 68
I+T+FV G PDD++ RE N+F GF+ LK
Sbjct: 82 ISTIFVVGFPDDMQEREFQNMFTFSAGFEAATLK 115
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 75 QVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPG 124
Q++ FA F + A+ A L G + D + GSVL E+A+ N KR G
Sbjct: 204 QIIGFAKFRTREEALLARDMLQGRRVDIEKGSVLKAEMAKKNLHTKRGVG 253
>gi|410898108|ref|XP_003962540.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Takifugu
rubripes]
Length = 539
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 105/280 (37%), Gaps = 40/280 (14%)
Query: 22 PPPPYHHQQQDNGINT-LFVSGLPDDVRAREIHNLFRRK-PGFDFCQLKYTGRG-NQVVA 78
PPP H I T +FV +P D+ E+ LF + P +D + G N+ A
Sbjct: 147 PPPEAVHSGAQPTIGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLSGLNRGYA 206
Query: 79 FATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTE 138
F TF + A A+ N + P G + + ++ +N+R +V ++KT+
Sbjct: 207 FVTFCTKEAAQQAVKLCNNNEIRP--GKHIGVCISVANNR--------LFVGSIPKSKTK 256
Query: 139 ANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGG- 197
+ E S + D ++ +D F + E + A + S K G
Sbjct: 257 EQIIEEFSKVTEGLNDVILYLQPVDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGN 316
Query: 198 -----------------VQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMP 240
+ LF+ NL + TE+ L++ S + R +
Sbjct: 317 LVTVEWADPLEDPDPEVMAKVKVLFVRNLASSVTEELLEKAFSQFGKLE----RVKKLKD 372
Query: 241 VAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSK 280
AF FEE + A A+ + L D G HIE +K
Sbjct: 373 YAFIHFEERDGAVKAL-----ADLNGKDLEGEHIEIVFAK 407
>gi|392569148|gb|EIW62322.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 556
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Query: 161 NIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQ 220
NID +++ D + +RA G++ + +P + LF+ NL +CTED++ +
Sbjct: 368 NIDKSEQKDKGAAREKRAEKFGDSAS------------EPSAVLFVGNLSWDCTEDQVWE 415
Query: 221 TLSVYPGFNMLKM--RARGGMPVAFA--DFEEVEQASIAMEGL 259
+ +++ G P F +F ++E A A EGL
Sbjct: 416 VFGEHGDVKSVRLPTDRETGRPKGFGYVEFTDIETAKKAFEGL 458
>gi|302769730|ref|XP_002968284.1| hypothetical protein SELMODRAFT_409510 [Selaginella moellendorffii]
gi|302788648|ref|XP_002976093.1| hypothetical protein SELMODRAFT_175284 [Selaginella moellendorffii]
gi|300156369|gb|EFJ22998.1| hypothetical protein SELMODRAFT_175284 [Selaginella moellendorffii]
gi|300163928|gb|EFJ30538.1| hypothetical protein SELMODRAFT_409510 [Selaginella moellendorffii]
Length = 235
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
P + LF+ L + + +L+ S PGF ++M A+ G +AF ++ EV+QAS+A
Sbjct: 160 PNNILFVQKLPHDTSSAQLQMLFSSIPGFKEVRMVDAKPG--IAFVEYAEVDQASVAKST 217
Query: 259 LQDSTLPSSDRGGMHIEYAR 278
+ + MHI YA+
Sbjct: 218 FHAFRV---NESPMHITYAK 234
>gi|194228035|ref|XP_001914759.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Equus
caballus]
Length = 200
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 14/130 (10%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L + + ++N+F C++ +G + F F ++A
Sbjct: 85 RKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAER 144
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGD 150
A+ +NG+ + + I + R S K+R+ GA+ R T A+V+ D +
Sbjct: 145 AIDAMNGMFLNYRK-----IFVGRFKSHKEREAERGAWA----RQSTSADVK-----DFE 190
Query: 151 SDTDEASPVR 160
DTDE + R
Sbjct: 191 EDTDEEATFR 200
>gi|255555393|ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223542114|gb|EEF43658.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 644
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 106/275 (38%), Gaps = 47/275 (17%)
Query: 26 YHHQQ---QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRG-NQVVAFAT 81
Y H+ + +G +F+ L + + +H+ F C++ G ++ F
Sbjct: 99 YSHRDPSVRKSGSGNIFIKNLDKGIDHKALHDTFSAFGNILSCKVATDSSGQSKGYGFVQ 158
Query: 82 FVNHQTAVAALHELNGVKFDPQS---GSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTE 138
F N ++A A+ +LNG+ + + G L + S K R + YV T TE
Sbjct: 159 FDNEESAQKAIEKLNGMLLNDKQVYVGPFLRKQERESAIDKTRF--NNVYVKNLSETTTE 216
Query: 139 ANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEK-----P 193
+++++ G A +R+ D K F E A D+ AV +N +K
Sbjct: 217 EDLKKAFGEYGT--ITSAVVMRDGDGKTKC-FGFVNFENADDAATAVEALNGKKFDDKEW 273
Query: 194 YEGGVQP------------------------CSTLFIANLGPNCTEDELKQTLSVYPGFN 229
+ G Q + L+I NL + +D LKQ S +
Sbjct: 274 FVGKAQKKNERENELKVRFEQSMKEAADKFQGANLYIKNLDDSIGDDRLKQLFSPFGTIT 333
Query: 230 MLK-MR-----ARGGMPVAFADFEEVEQASIAMEG 258
K MR +RG VAF+ EE +A + M G
Sbjct: 334 SCKVMRDPNGISRGSGFVAFSTPEEASKALMEMNG 368
>gi|296423050|ref|XP_002841069.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637301|emb|CAZ85260.1| unnamed protein product [Tuber melanosporum]
Length = 164
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
P STLF+ NL D L + GF ++M G +AF +FE++E A A EG+
Sbjct: 89 PNSTLFLQNLPDETDSDTLTSLFGRFDGFKEVRM-VPGRKGIAFVEFEQLEGAIGAKEGI 147
Query: 260 QDSTL 264
TL
Sbjct: 148 GGMTL 152
>gi|348581624|ref|XP_003476577.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cavia
porcellus]
Length = 224
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 36/247 (14%)
Query: 37 TLFVSGLPDDVRAREI-HNLFRRKPGF----DFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
T++++ + D ++ E+ +L+ F D LK Q AF F ++ A
Sbjct: 8 TIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQ--AFVIFKELGSSTNA 65
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDS 151
L +L G F G + I+ A+++S +I K T A+ ++
Sbjct: 66 LRQLQGFPF---YGKPMRIQYAKTDSD-----------IISKMRGTFADKEKKKEKKKAK 111
Query: 152 DTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGP 211
++ + N G ++T A GN VAP N + P P LF+ NL
Sbjct: 112 TVEQTAMTAN---KKPGQGIST----ANTQGN-VAP-NPQVP---DYPPNYILFLNNLPE 159
Query: 212 NCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGG 271
E L + +PGF +++ G +AF +FE QA A + LQ + S
Sbjct: 160 ETNEMMLSMLFNQFPGFKEVRL-VPGRHDIAFVEFENDGQAGAARDALQGFKITPSH--A 216
Query: 272 MHIEYAR 278
M I YA+
Sbjct: 217 MKITYAK 223
>gi|297746331|emb|CBI16387.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRA-RGGMPVAFADFEEVEQASIAMEG 258
+T+F+ NL PN TE+ELKQ S + +K+ A RG V F E+A M+G
Sbjct: 253 TTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQG 310
>gi|50738734|ref|XP_419331.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Gallus
gallus]
gi|326914835|ref|XP_003203728.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like [Meleagris
gallopavo]
Length = 226
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 102/247 (41%), Gaps = 34/247 (13%)
Query: 37 TLFVSGLPDDVRAREI-HNLFRRKPGF----DFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
T++++ + D ++ E+ +L+ F D LK Q AF F ++ A
Sbjct: 8 TIYINNINDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQ--AFVIFKELGSSTNA 65
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDS 151
L +L G F G + I+ A+++S +I K T A+ ++
Sbjct: 66 LRQLQGFPF---YGKPMRIQYAKTDSD-----------IISKMRGTFADKEKRKEKKKAK 111
Query: 152 DTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGP 211
++++ ++A+K + + + + S +P N + P P LF+ NL
Sbjct: 112 SLEQSA-----NAANKK--IIQGATQNSTSAPGTSPQNQQVPDN---PPNYILFLNNLPE 161
Query: 212 NCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGG 271
E L + +PGF +++ G +AF +FE QA A + LQ + S
Sbjct: 162 ETNEMMLSMLFNQFPGFKEVRL-VPGRHDIAFVEFENECQAGAARDALQGFKITPSH--A 218
Query: 272 MHIEYAR 278
M I YA+
Sbjct: 219 MKITYAK 225
>gi|225435468|ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 447
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRA-RGGMPVAFADFEEVEQASIAMEG 258
+T+F+ NL PN TE+ELKQ S + +K+ A RG V F E+A M+G
Sbjct: 253 TTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQG 310
>gi|302772374|ref|XP_002969605.1| hypothetical protein SELMODRAFT_440826 [Selaginella moellendorffii]
gi|300163081|gb|EFJ29693.1| hypothetical protein SELMODRAFT_440826 [Selaginella moellendorffii]
Length = 829
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 182 GNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNML--KMRARGGM 239
GN A + E PY G P TLF+ N+ N + EL+ Y L + RG +
Sbjct: 170 GNTAAVLAGEHPY--GEHPSRTLFVRNINSNVEDAELRALFEQYGAIRTLYTACKHRGFV 227
Query: 240 PVAFADFEEVEQASIAMEGLQDSTL 264
+++ D + A AM LQ+ L
Sbjct: 228 MISYYD---IRAARTAMRALQNKPL 249
>gi|222623094|gb|EEE57226.1| hypothetical protein OsJ_07197 [Oryza sativa Japonica Group]
Length = 459
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 92/252 (36%), Gaps = 56/252 (22%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRK----PGFDFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
+++FV L DV + +LF +K G TGR ++ F F + A
Sbjct: 208 HSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGR-SRGYGFVRFGDDNDKTHA 266
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDS 151
+ E+NG S I + + R + + AY ++ K AN+ D S
Sbjct: 267 MTEMNGAYC-----STRPIRIGPATPRDLQPTSASAYGLV---AKARANIWGEYVGDSGS 318
Query: 152 DTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGP 211
SP R DS DS N T+++ L P
Sbjct: 319 -----SPPRQSDS---------------DSTN------------------RTIYVGGLDP 340
Query: 212 NCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGG 271
N TEDEL++ + Y +K+ G F F A A++GL ST+ +
Sbjct: 341 NATEDELRKAFAKYGDLASVKIPV--GKQCGFVQFVNRPDAEEALQGLNGSTI---GKQA 395
Query: 272 MHIEYARSKMRK 283
+ + + RS K
Sbjct: 396 VRLSWGRSPASK 407
>gi|144952800|gb|ABP04054.1| RNA-binding protein [Pinctada fucata]
Length = 624
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 107/278 (38%), Gaps = 38/278 (13%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKY---TGRGNQVVAF 79
PPP ++ + +F +P DV E+ LF + +L TG N+ F
Sbjct: 148 PPPGEDERNAPSGSEVFCGKIPKDVFEDELIPLFEKCGKIWDLRLMMDPMTGF-NRGYCF 206
Query: 80 ATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRK------KRKPGSGAYVVIDK 133
TF + A+ A+ +L+ + P G + + ++ +N R K K K
Sbjct: 207 ITFCDKPGALEAVKQLDNYQIKP--GKSIKVNISVANQRLFVGNIPKSKSKDEIMEEFSK 264
Query: 134 RTKTEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSG----------- 182
+T+ +V SA+ ++ + +S + ++R SG
Sbjct: 265 KTEDLTDVIIYRSAEKENQKNRGFAFLEYESHK----AASTAKRKLSSGRTKVWGCDVIV 320
Query: 183 NAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVA 242
+ PI+ P + L++ NL + TED LK+ Y +K G
Sbjct: 321 DWADPIDD--PDSDTMSKVKVLYVRNLTSDVTEDTLKEKFGEYGKVERVKKIKDYG---- 374
Query: 243 FADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARSK 280
F FEE + A AMEG+ L G + +E + +K
Sbjct: 375 FIHFEERDDAVKAMEGMNGQKL-----GKLEMEVSLAK 407
>gi|359478387|ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 438
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKMRA-RGGMPVAFADFEEVEQASIAMEG 258
+T+F+ NL PN TE+ELKQ S + +K+ A RG V F E+A M+G
Sbjct: 253 TTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQG 310
>gi|145323766|ref|NP_001077472.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189939|gb|AEE28060.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 200
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
P + LFI NL L+ YPGF ++M A+ G +AF ++E+ Q+S+AM+
Sbjct: 124 PNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKPG--IAFVEYEDDVQSSMAMQA 181
Query: 259 LQ 260
LQ
Sbjct: 182 LQ 183
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 21 VPPPPYHHQQQDNG--INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVA 78
+P PP+ QD N LF+ LP + + + LF + PGF ++ G +A
Sbjct: 109 MPVPPFQPSGQDTMPPNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKPG---IA 165
Query: 79 FATFVNHQTAVAALHELNGVKFDPQSGSVL 108
F + + + A+ L G K PQ+ V+
Sbjct: 166 FVEYEDDVQSSMAMQALQGFKITPQNPMVV 195
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 199 QPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM--RARGGMPVAFA--DFEEVEQASI 254
QP +TLF+ N+ + T+D + + Y N +++ G P F +F +E+A
Sbjct: 358 QPSATLFVGNISFDATQDMVTEVFQEYGSINAVRLPTDRETGAPKGFGYVEFSSIEEAKS 417
Query: 255 AMEGL 259
AME L
Sbjct: 418 AMENL 422
>gi|387018112|gb|AFJ51174.1| u2 small nuclear ribonucleoprotein B-like [Crotalus adamanteus]
Length = 225
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 97/247 (39%), Gaps = 35/247 (14%)
Query: 37 TLFVSGLPDDVRA----REIHNLFRR-KPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
TL+++ + D ++ R ++ LF + D LK Q AF F +A A
Sbjct: 8 TLYINNVNDKIKKDELKRSLYALFSQFGHVVDIVALKTMKMRGQ--AFIIFKELGSATNA 65
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDS 151
L +L G F G + I+ A+++S VI K T A+ ++
Sbjct: 66 LRQLQGFPF---YGKPMRIQYAKTDSE-----------VISKMRGTFADKEKRKEKKKTK 111
Query: 152 DTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGP 211
++A+ ++G + + + S N P N P LF+ NL
Sbjct: 112 SLEQAANAN--KKPNQGANQNSTNAQGNASQNQQVPDNP---------PNHILFLNNLPE 160
Query: 212 NCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGG 271
E L + +PGF +++ G ++F +FE QA A + LQ + S
Sbjct: 161 ETNEMMLSMLFNQFPGFKEVRL-VPGRHDISFVEFENEGQAGAARDALQGFKITPSH--A 217
Query: 272 MHIEYAR 278
M I YA+
Sbjct: 218 MKITYAK 224
>gi|449512588|ref|XP_004176179.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Taeniopygia
guttata]
Length = 221
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
P LF+ NL E L + +PGF +++ G +AF +FE QA A + L
Sbjct: 145 PNCILFLNNLPEETNEMMLSMLFNQFPGFKEVRL-VPGRHDIAFVEFENENQAGAARDAL 203
Query: 260 QDSTLPSSDRGGMHIEYAR 278
Q +P S M I YA+
Sbjct: 204 QGFKIPPSH--AMKITYAK 220
>gi|312092240|ref|XP_003147268.1| RNA-binding protein [Loa loa]
Length = 383
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTGRGNQVVAFATFVNHQTAVAALHE 94
L ++ LP ++ E+H LF D C+L K TG+ + F ++ + A A+
Sbjct: 20 LIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQ-SLGYGFVNYIRQEDAYKAVTS 78
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTD 154
LNG++ ++ + + AR +S + G+ YV +T ++ +++ G T
Sbjct: 79 LNGLRLQNKT---IKVSFARPSSESIK--GANLYVSGLAKTMSQLDLEALFKPFGQIITS 133
Query: 155 EASPVRNIDSADKG-DFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNC 213
N+ KG FV + +R +++ +A+ +N + P G +P + F + N
Sbjct: 134 RILS-DNVTGISKGVGFV--RFDRKSEAEDAIEKLNGKIP-AGCTEPITVKFANSPAANA 189
Query: 214 TEDELK 219
+ +L+
Sbjct: 190 QKAQLQ 195
>gi|440801091|gb|ELR22116.1| hypothetical protein ACA1_159130 [Acanthamoeba castellanii str.
Neff]
Length = 270
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 195 EGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFN----MLKMRARGGMPV---AFADFE 247
E V P TL++ NL DEL++ L Y F+ +L + A+ + + AF F
Sbjct: 2 EAEVPPNETLYVNNLNEKVKRDELRKAL--YGLFSQYGTVLDIVAQKSLKLRGQAFVIFR 59
Query: 248 EVEQASIAMEGLQDSTLPSSDRGGMHIEYARSK 280
++ AS A++ LQ + D+ MHI+YA+SK
Sbjct: 60 DIGSASTALKALQ--SFAFYDK-PMHIQYAKSK 89
>gi|8954049|gb|AAF82223.1|AC067971_31 Strong similarity to a small nuclear ribonucleoprotein U2B'' -
potato from Solanum tuberosum gb|M72892. It contains an
RNA recognition motif PF|00076. ESTs gb|AA041158 and
gb|AI992475 come from this gene [Arabidopsis thaliana]
Length = 247
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
P + LFI NL L+ YPGF ++M A+ G +AF ++E+ Q+S+AM+
Sbjct: 171 PNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKPG--IAFVEYEDDVQSSMAMQA 228
Query: 259 LQ 260
LQ
Sbjct: 229 LQ 230
>gi|66802807|ref|XP_635247.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60463542|gb|EAL61727.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 489
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 26 YHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGF-DFCQLKYTGRGNQVVAFATFVN 84
Y +Q+ + LFV LP +I LF D C L+ ++ F F N
Sbjct: 81 YADSEQEKLASKLFVGMLPRSYEEEQIRELFEPHGVVEDICILRGPNSESKGCGFIKFDN 140
Query: 85 HQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRK 122
++A++A+ LNG+K D S + L ++ A + KK+K
Sbjct: 141 RESALSAIATLNGMKLD-GSPNPLVVKFADTEKDKKKK 177
>gi|401396957|ref|XP_003879947.1| hypothetical protein NCLIV_003960 [Neospora caninum Liverpool]
gi|325114355|emb|CBZ49912.1| hypothetical protein NCLIV_003960 [Neospora caninum Liverpool]
Length = 234
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQ 260
+LFI NL P T+ L Y G + R G VAF DF QA++AM+G+Q
Sbjct: 162 SLFIENLPPKATKTSLDILFGQYRGHT--ESRLIEGRGVAFVDFSTQAQAAVAMQGMQ 217
>gi|212722984|ref|NP_001132004.1| uncharacterized protein LOC100193409 [Zea mays]
gi|194693170|gb|ACF80669.1| unknown [Zea mays]
Length = 422
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 195 EGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASI 254
+GG +T+F+ L P+ +E++L+Q S Y + +K+ G F F + + A
Sbjct: 281 DGGDLTNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPV--GKQCGFVQFAQRKNAED 338
Query: 255 AMEGLQDSTL 264
A++GL ST+
Sbjct: 339 ALQGLNGSTI 348
>gi|30679897|ref|NP_172177.3| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189938|gb|AEE28059.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 228
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
P + LFI NL L+ YPGF ++M A+ G +AF ++E+ Q+S+AM+
Sbjct: 152 PNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKPG--IAFVEYEDDVQSSMAMQA 209
Query: 259 LQ 260
LQ
Sbjct: 210 LQ 211
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 23 PPPYHHQQQDNG--INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFA 80
PPP+ QD N LF+ LP + + + LF + PGF ++ G +AF
Sbjct: 139 PPPFQPSGQDTMPPNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKPG---IAFV 195
Query: 81 TFVNHQTAVAALHELNGVKFDPQSGSVL 108
+ + + A+ L G K PQ+ V+
Sbjct: 196 EYEDDVQSSMAMQALQGFKITPQNPMVV 223
>gi|351695324|gb|EHA98242.1| U2 small nuclear ribonucleoprotein B'' [Heterocephalus glaber]
Length = 224
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 98/247 (39%), Gaps = 36/247 (14%)
Query: 37 TLFVSGLPDDVRAREI-HNLFRRKPGF----DFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
T++++ + D ++ E+ +L+ F D LK Q AF F ++ A
Sbjct: 8 TIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQ--AFVIFKELGSSTNA 65
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDS 151
L +L G F G + I+ A+++S +I K T A+ ++
Sbjct: 66 LRQLQGFPF---YGKPMRIQYAKTDSD-----------IISKMRGTFADKEKKKEKKKAK 111
Query: 152 DTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGP 211
++ + N G ++T + + + N P + P P LF+ NL
Sbjct: 112 TVEQTATTAN---KKPGQGISTTNTQGNATTNPQVP---DYP------PNYILFLNNLPE 159
Query: 212 NCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGG 271
E L + +PGF +++ G +AF +FE QA A + LQ + S
Sbjct: 160 ETNEMMLSMLFNQFPGFKEVRL-VPGRHDIAFVEFENDGQAGAARDALQGFKITPSH--A 216
Query: 272 MHIEYAR 278
M I YA+
Sbjct: 217 MKITYAK 223
>gi|30679892|ref|NP_850936.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75329133|sp|Q8H1S6.1|RU2B2_ARATH RecName: Full=U2 small nuclear ribonucleoprotein B'' 2; Short=U2
snRNP B'' 2
gi|23296313|gb|AAN13038.1| putative spliceosomal protein (U2B) [Arabidopsis thaliana]
gi|332189937|gb|AEE28058.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 229
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
P + LFI NL L+ YPGF ++M A+ G +AF ++E+ Q+S+AM+
Sbjct: 153 PNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKPG--IAFVEYEDDVQSSMAMQA 210
Query: 259 LQ 260
LQ
Sbjct: 211 LQ 212
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 21 VPPPPYHHQQQDNG--INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVA 78
+P PP+ QD N LF+ LP + + + LF + PGF ++ G +A
Sbjct: 138 MPVPPFQPSGQDTMPPNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKPG---IA 194
Query: 79 FATFVNHQTAVAALHELNGVKFDPQSGSVL 108
F + + + A+ L G K PQ+ V+
Sbjct: 195 FVEYEDDVQSSMAMQALQGFKITPQNPMVV 224
>gi|426192468|gb|EKV42404.1| hypothetical protein AGABI2DRAFT_188573 [Agaricus bisporus var.
bisporus H97]
Length = 911
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 200 PCSTLFIANLGP---------NCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVE 250
P +TL++ NL + E+ L++ PG+ L R + P+ F +FE+V
Sbjct: 675 PINTLYVGNLPTSPPPIGMPQDHLEESLRELFRNQPGYRRLCFRQKHNGPMCFVEFEDVG 734
Query: 251 QASIAMEGLQDSTLPSSDR-GGMHIEYARSKM 281
A+ AM L + L + GG+ + Y+++ +
Sbjct: 735 FAARAMSDLHGNNLKGLVKGGGIRLSYSKNPL 766
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 75 QVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPG 124
Q++ FA F + A+ A L G + D + G++L E+A+ N KR G
Sbjct: 324 QIIGFAKFKSRDAAIEARDVLQGRRIDIEKGAILKAEMAKKNLHTKRGVG 373
>gi|294909629|ref|XP_002777812.1| single-stranded G-strand telomeric DNA-binding protein, putative
[Perkinsus marinus ATCC 50983]
gi|239885774|gb|EER09607.1| single-stranded G-strand telomeric DNA-binding protein, putative
[Perkinsus marinus ATCC 50983]
Length = 199
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 204 LFIANLGPNCTEDELKQTLSVYPGFNMLKM----RARGGMPVAFA---DFEEVEQASIAM 256
LF+ NL P+ TEDE+ + N + + R+R G AF D + E+A AM
Sbjct: 7 LFVGNLPPDATEDEIFTRFKEFGTINEVYLMSGGRSRSGQSSAFVKYYDTDSCERAIAAM 66
Query: 257 EGLQDSTLPSSDRGGMHIEYARSKMRK 283
+ L + DR + ++YA+S+ R+
Sbjct: 67 NMI--GKLRTQDRDTVVVKYAKSQARR 91
>gi|357134589|ref|XP_003568899.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Brachypodium
distachyon]
Length = 251
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 105/258 (40%), Gaps = 45/258 (17%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFAT-------FVNHQTAV 89
T++++ L + + E+ ++ F Q G+ +V+AF T +V +
Sbjct: 22 TIYINNLNEKTKLEEL----KKSLNAVFSQF---GKILEVLAFKTLKHKGQAWVVFEDVA 74
Query: 90 AALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADG 149
+A L ++ P + I+ A++ S K G +V ++R +T+ ++ +
Sbjct: 75 SATEALKRMQDFPFYDKPMKIQYAKTKSDVVAK-ADGTFVPRERRKRTDEKPEKKQKREQ 133
Query: 150 DSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGG--------VQPC 201
D + + N G AP S+ P+ GG + P
Sbjct: 134 HHDVSQGTLGMNAYPGAYG-----------------APPLSQLPFGGGPKVMMPEIIVPN 176
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEGLQ 260
+ LF+ NL + T L+ Y GF +M A+ G +AF ++ + QA+ AM LQ
Sbjct: 177 NILFVQNLPHDTTPMMLQMLFCQYQGFKEARMIEAKPG--IAFVEYGDEGQATAAMSALQ 234
Query: 261 DSTLPSSDRGGMHIEYAR 278
+ + S M I YA+
Sbjct: 235 NFKI--SKDNLMLITYAK 250
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 199 QPCSTLFIANLGPNCTEDELKQTL-SVYPGF----NMLKMRARGGMPVAFADFEEVEQAS 253
QP T++I NL +ELK++L +V+ F +L + A+ FE+V A+
Sbjct: 18 QPNVTIYINNLNEKTKLEELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWVVFEDVASAT 77
Query: 254 IAMEGLQDSTLPSSDRGGMHIEYARSK 280
A++ +QD P D+ M I+YA++K
Sbjct: 78 EALKRMQD--FPFYDK-PMKIQYAKTK 101
>gi|219121341|ref|XP_002185896.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582745|gb|ACI65366.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 226
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 99/239 (41%), Gaps = 37/239 (15%)
Query: 36 NTLFVSGLPDDVRA----REIHNLFRRKPG-FDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
NTL+V L V+ R ++ LF R + L+ G Q AF F + Q A A
Sbjct: 10 NTLYVKNLDWKVKKNLLKRALYALFTRYGKVLEVVALRKDGLRGQ--AFVIFEDVQAATA 67
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGD 150
AL L G F G + +E AR S + K G+YV +R K + E+ S++
Sbjct: 68 ALQALQGFPF---FGKDVALEYARETSDRIAKR-DGSYVPKARRIKKALDQNETDSSE-- 121
Query: 151 SDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIA-NL 209
A+K D + E +AVAP + P P S +A NL
Sbjct: 122 --------------ANKQDNHQAKEE------SAVAPPEGDMPSPQDTAPPSKYLLAQNL 161
Query: 210 GPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSD 268
+C E L Y G+ ++M G +AF +FE+ A++A L L +S+
Sbjct: 162 PSDCNEMMLGMLFRQYSGYKEVRMPRPG---LAFIEFEDEPHATLARNALNGFKLTTSE 217
>gi|393909831|gb|EFO16801.2| RNA-binding protein [Loa loa]
Length = 414
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTGRGNQVVAFATFVNHQTAVAALHE 94
L ++ LP ++ E+H LF D C+L K TG+ + F ++ + A A+
Sbjct: 51 LIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQ-SLGYGFVNYIRQEDAYKAVTS 109
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTD 154
LNG++ ++ + + AR +S + G+ YV +T ++ +++ G T
Sbjct: 110 LNGLRLQNKT---IKVSFARPSSESIK--GANLYVSGLAKTMSQLDLEALFKPFGQIITS 164
Query: 155 EASPVRNIDSADKG-DFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNC 213
N+ KG FV + +R +++ +A+ +N + P G +P + F + N
Sbjct: 165 RILS-DNVTGISKGVGFV--RFDRKSEAEDAIEKLNGKIP-AGCTEPITVKFANSPAANA 220
Query: 214 TEDELK 219
+ +L+
Sbjct: 221 QKAQLQ 226
>gi|30678391|ref|NP_850933.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|30678398|ref|NP_563665.3| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|3929368|sp|O22315.1|SFRS1_ARATH RecName: Full=Pre-mRNA-splicing factor SF2; AltName: Full=SR1
protein
gi|6056417|gb|AAF02881.1|AC009525_15 alternative splicing factor SF2a [Arabidopsis thaliana]
gi|2443472|gb|AAB71385.1| ASF/SF2 homolog [Arabidopsis thaliana]
gi|21554051|gb|AAM63132.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|26451794|dbj|BAC42991.1| putative ribonucleoprotein SF-2 [Arabidopsis thaliana]
gi|332189356|gb|AEE27477.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|332189358|gb|AEE27479.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 303
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
T++V LP D+R RE+ +LF + LK R AF F + + A A+H
Sbjct: 7 RTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPR-PPGYAFVEFDDARDAEDAIHGR 65
Query: 96 NGVKFDPQSGSVLHIELARSNSR 118
+G FD G L +ELA R
Sbjct: 66 DGYDFD---GHRLRVELAHGGRR 85
>gi|5815235|gb|AAD52609.1|AF173640_1 splicing factor SR1 [Arabidopsis thaliana]
Length = 307
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
T++V LP D+R RE+ +LF + LK R AF F + + A A+H
Sbjct: 7 RTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPR-PPGYAFVEFDDARDAEDAIHGR 65
Query: 96 NGVKFDPQSGSVLHIELARSNSR 118
+G FD G L +ELA R
Sbjct: 66 DGYDFD---GHRLRVELAHGGRR 85
>gi|351726226|ref|NP_001237887.1| uncharacterized protein LOC100499914 [Glycine max]
gi|255627621|gb|ACU14155.1| unknown [Glycine max]
Length = 232
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
N LF+ LP + R + LF + PGF L G +AF F + + A+ L
Sbjct: 158 NILFIENLPHETTGRMLEMLFEQYPGFKEVCLIEAKPG---IAFVDFEDEVQSSMAMQAL 214
Query: 96 NGVKFDPQSGSVL 108
+G K PQ+ ++
Sbjct: 215 HGFKITPQNPMII 227
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFN-MLKMRARGGMPVAFADFEEVEQASIAMEG 258
P + LFI NL T L+ YPGF + + A+ G +AF DFE+ Q+S+AM+
Sbjct: 156 PNNILFIENLPHETTGRMLEMLFEQYPGFKEVCLIEAKPG--IAFVDFEDEVQSSMAMQA 213
Query: 259 L 259
L
Sbjct: 214 L 214
>gi|409079579|gb|EKM79940.1| hypothetical protein AGABI1DRAFT_127618 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1064
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 200 PCSTLFIANLGP---------NCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVE 250
P +TL++ NL + E+ L++ PG+ L R + P+ F +FE+V
Sbjct: 828 PINTLYVGNLPTSPPPIGMPQDHLEESLRELFRNQPGYRRLCFRQKHNGPMCFVEFEDVG 887
Query: 251 QASIAMEGLQDSTLPSSDR-GGMHIEYARSKM 281
A+ AM L + L + GG+ + Y+++ +
Sbjct: 888 FAARAMSDLHGNNLKGLVKGGGIRLSYSKNPL 919
Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 75 QVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPG 124
Q++ FA F + A+ A L G + D + G++L E+A+ N KR G
Sbjct: 441 QIIGFAKFKSRDAAIEARDVLQGRRIDIEKGAILKAEMAKKNLHTKRGVG 490
>gi|388854599|emb|CCF51756.1| uncharacterized protein [Ustilago hordei]
Length = 1235
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Query: 24 PPYHHQQQDNGINT--LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGN-QVVAFA 80
P Q+ D N LFVSGLP ++ E+ F +L G + + F
Sbjct: 939 PSRRKQRSDANENAKELFVSGLPRNITDEELKTYFEAYGKVTGVRLLRNAEGGLRGIGFV 998
Query: 81 TFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSG 126
F N A A+ ELN K+ ++ + + LA S S ++ G G
Sbjct: 999 DFENALDATRAMKELNSTKWRAKT---ISVTLADSRSSNSKQSGVG 1041
>gi|384252928|gb|EIE26403.1| hypothetical protein COCSUDRAFT_46074 [Coccomyxa subellipsoidea
C-169]
Length = 917
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 52 IHNLFRRKPGFDFCQLK--YTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLH 109
I LFR PG ++C LK +T ++ + + + + A AA+ LNGV+F SG L
Sbjct: 650 IIRLFRAFPGLEYCDLKRDHTTGHSRGFCYVKYSSPEIANAAIEHLNGVEFPQGSGLRLK 709
Query: 110 IELA 113
+ LA
Sbjct: 710 VMLA 713
>gi|429239519|ref|NP_595090.2| single-stranded telomeric binding protein Tgc1 [Schizosaccharomyces
pombe 972h-]
gi|408360248|sp|Q9HEQ9.3|TCG1_SCHPO RecName: Full=Single-stranded TG1-3 DNA-binding protein; AltName:
Full=Meiotically up-regulated gene 187 protein
gi|12000355|gb|AAG02568.1| single-stranded TG1-3 binding protein [Schizosaccharomyces pombe]
gi|347834245|emb|CAA22531.2| single-stranded telomeric binding protein Tgc1 [Schizosaccharomyces
pombe]
Length = 349
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 102/253 (40%), Gaps = 51/253 (20%)
Query: 38 LFVSGLPDDVRAREIHNLFR-----RKPGFDFCQLKYTGRGNQVV----AFATFVNHQTA 88
+FV L + EI +LF RK F +++ RG ++V AF TF N +
Sbjct: 47 VFVGRLSTSTKKSEIRSLFETVGTVRKVTIPFRRVR---RGTRLVPSGIAFVTFNNQEDV 103
Query: 89 VAALHELNGVKFDPQSGSVLHIELAR------SNSRKKRKPGSGAYVVIDKRTKTEANVQ 142
A+ LNG D + + ++ AR RKK K +G + +T +V+
Sbjct: 104 DKAIETLNGKTLDDRE---IVVQKARPVQEQPIKDRKKSKNKNG------EEPETSTSVE 154
Query: 143 ESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCS 202
+ SA G SD +EA+ S+++ + V + N + + P +
Sbjct: 155 NAESAKGSSDENEANTA-TAPSSNEANGVDKKQ-------NEIKGKGGSGKNKAKPLPPN 206
Query: 203 TLFIANLGPNCTEDELKQTLSVY------------PGFNMLKMRARG----GMPVAFADF 246
+++++ L T + LK+ Y P + + +++ RG G F F
Sbjct: 207 SIYVSGLSVTLTNEGLKEMFDAYNPTRARIAVRSLPPYIIRRIKLRGEQRRGRGFGFVSF 266
Query: 247 EEVEQASIAMEGL 259
E S A+E +
Sbjct: 267 ANAEDQSRAIEEM 279
>gi|237840841|ref|XP_002369718.1| U2 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|95007435|emb|CAJ20656.1| Rnp (Rrm rna binding domain) containing protein, putative
[Toxoplasma gondii RH]
gi|211967382|gb|EEB02578.1| U2 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221482936|gb|EEE21267.1| u2 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
GT1]
gi|221503274|gb|EEE28972.1| u2 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
VEG]
Length = 233
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQ 260
+LFI NL P T+ L Y G + R G VAF DF QA++AM+G+Q
Sbjct: 161 SLFIENLPPKATKTSLDILFGQYRGHT--ESRLIEGRGVAFVDFSTQAQAAVAMQGMQ 216
>gi|302844823|ref|XP_002953951.1| hypothetical protein VOLCADRAFT_106208 [Volvox carteri f.
nagariensis]
gi|300260763|gb|EFJ44980.1| hypothetical protein VOLCADRAFT_106208 [Volvox carteri f.
nagariensis]
Length = 817
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTGRGNQVVAFATFVNHQTAVAAL 92
N+L++ LP DV RE+ ++FR GF +L ++T R AF F + Q A AA+
Sbjct: 473 NSLYLENLPTDVTHRELTHIFRPFAGFVTLRLVVKEHTNREKSAKAFVDFTDAQAATAAM 532
Query: 93 HELNGVKFDPQSGSVLHIELARSNSRKKRKP-----GSGAYVVID 132
LNG + D G H+ L +R ++P G G+ ++D
Sbjct: 533 SALNGYQLD-LEGQTPHV-LRPVYARPPKEPATVNRGMGSNTILD 575
>gi|294463261|gb|ADE77166.1| unknown [Picea sitchensis]
Length = 376
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVAA 91
LF+ GLP D RE ++FR GF ++ K G V+ F F + + A A
Sbjct: 268 VLFIDGLPLDCTVREAAHIFRPFIGFKEVRVVHKEPKRPGGEKSVLCFVEFTDLRHAAIA 327
Query: 92 LHELNGVKF---DPQSGSVLHIELARSNSRK 119
L G K DP SG+ L I + +SRK
Sbjct: 328 REALQGYKVDEHDPNSGT-LRISFSLYSSRK 357
>gi|318065773|ref|NP_001187499.1| u2 small nuclear ribonucleoprotein b'' [Ictalurus punctatus]
gi|308322301|gb|ADO28288.1| u2 small nuclear ribonucleoprotein b'' [Ictalurus furcatus]
gi|308323171|gb|ADO28722.1| u2 small nuclear ribonucleoprotein b'' [Ictalurus punctatus]
Length = 219
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 185 VAPINSEKPYEGGVQ-----PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM 239
V +N++ P VQ P LF+ NL E L + +PGF +++ G
Sbjct: 123 VNAVNNQPPPPATVQVPDNPPNYILFLTNLPEETNEMMLSMLFNQFPGFKEVRL-VPGKH 181
Query: 240 PVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYARS 279
+AF +FE QA +A + LQ + ++ M I YA+
Sbjct: 182 DIAFVEFEGEAQAGVAKDALQGFRITAT--CAMKITYAKK 219
>gi|168056145|ref|XP_001780082.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668485|gb|EDQ55091.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 590
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Query: 184 AVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNML--KMRARGGMPV 241
A + E PY G P TLF+ N+ N + ELKQ Y L + RG + +
Sbjct: 32 AAGSVAGEHPY--GEHPSRTLFVRNINSNVEDTELKQLFEQYGAIRTLYTACKHRGFVMI 89
Query: 242 AFADFEEVEQASIAMEGLQDSTL 264
++ D + A AM LQ+ L
Sbjct: 90 SYYD---IRAARSAMRALQNKPL 109
>gi|390333482|ref|XP_789234.3| PREDICTED: U1 small nuclear ribonucleoprotein A-like
[Strongylocentrotus purpuratus]
Length = 235
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 12 PPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTG 71
PPI P P P P D N LF++ LP++ + LF++ G+ +L G
Sbjct: 143 PPIQVPTAPAPVVP------DEPNNILFLTNLPEETNELMLEVLFKQFNGYKEVRL-VPG 195
Query: 72 RGNQVVAFATFVNHQTAVAALHELNGVKFDP 102
R + +AF F N Q + A L G K P
Sbjct: 196 RHD--IAFVEFANEQQSGTAKDALQGFKITP 224
>gi|325303176|tpg|DAA34416.1| TPA_inf: alternative splicing factor ASF/SF2 [Amblyomma variegatum]
Length = 222
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
++V LP D+R+++I +LF + F LK R AF F + + A A+H +G
Sbjct: 10 IYVGNLPPDIRSKDIEDLFYKFGKITFIDLK--NRRGPPFAFVEFDDPRDAEDAVHARDG 67
Query: 98 VKFDPQSGSVLHIELARSNS--RKKRKPGSG 126
+D G L +E R ++ R PG G
Sbjct: 68 YDYD---GYRLRVEFPRGSAPGRGSMGPGRG 95
>gi|198455334|ref|XP_002138053.1| GA27561 [Drosophila pseudoobscura pseudoobscura]
gi|198133200|gb|EDY68611.1| GA27561 [Drosophila pseudoobscura pseudoobscura]
Length = 99
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 178 ATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSV--YPGFNMLKM 233
A + NA P N P PCSTLF+ANLG +E ELK+ S + N LK+
Sbjct: 42 AGSTNNATHPAN---PQIAANAPCSTLFVANLGQFVSEHELKEVFSSHGHNSSNWLKL 96
>gi|20453185|gb|AAM19833.1| At2g43410/T1O24.15 [Arabidopsis thaliana]
gi|27764946|gb|AAO23594.1| At2g43410/T1O24.15 [Arabidopsis thaliana]
Length = 901
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 16/95 (16%)
Query: 194 YEGGVQPCSTLFIANLGPNCTEDELKQTLSVY---PGFNMLKMRARGGMPVAFADFEEVE 250
Y +PC +L++ +GPN ++D+L++ S + F L+ R AF D+ E++
Sbjct: 87 YARPAKPCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRERK-----TAFIDYYEMD 141
Query: 251 QASIAMEGLQDSTLPSSDRGG--MHIEYARSKMRK 283
A LQ ++ GG + +++ RS+ K
Sbjct: 142 DA------LQAKSMNGKPMGGSFLRVDFLRSQAPK 170
>gi|145360944|ref|NP_181869.2| Flowering time control protein FPA [Arabidopsis thaliana]
gi|330255168|gb|AEC10262.1| Flowering time control protein FPA [Arabidopsis thaliana]
Length = 858
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 16/95 (16%)
Query: 194 YEGGVQPCSTLFIANLGPNCTEDELKQTLSVY---PGFNMLKMRARGGMPVAFADFEEVE 250
Y +PC +L++ +GPN ++D+L++ S + F L+ R AF D+ E++
Sbjct: 87 YARPAKPCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRERK-----TAFIDYYEMD 141
Query: 251 QASIAMEGLQDSTLPSSDRGG--MHIEYARSKMRK 283
A LQ ++ GG + +++ RS+ K
Sbjct: 142 DA------LQAKSMNGKPMGGSFLRVDFLRSQAPK 170
>gi|145331109|ref|NP_001078046.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|145331111|ref|NP_001078047.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|145331113|ref|NP_001078048.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|290463421|sp|Q8LPQ9.2|FPA_ARATH RecName: Full=Flowering time control protein FPA
gi|330255169|gb|AEC10263.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|330255170|gb|AEC10264.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|330255171|gb|AEC10265.1| Flowering time control protein FPA [Arabidopsis thaliana]
Length = 901
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 16/95 (16%)
Query: 194 YEGGVQPCSTLFIANLGPNCTEDELKQTLSVY---PGFNMLKMRARGGMPVAFADFEEVE 250
Y +PC +L++ +GPN ++D+L++ S + F L+ R AF D+ E++
Sbjct: 87 YARPAKPCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRERK-----TAFIDYYEMD 141
Query: 251 QASIAMEGLQDSTLPSSDRGG--MHIEYARSKMRK 283
A LQ ++ GG + +++ RS+ K
Sbjct: 142 DA------LQAKSMNGKPMGGSFLRVDFLRSQAPK 170
>gi|346471975|gb|AEO35832.1| hypothetical protein [Amblyomma maculatum]
Length = 223
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
++V LP D+R+++I +LF + F LK R AF F + + A A+H +G
Sbjct: 10 IYVGNLPPDIRSKDIEDLFYKFGKITFIDLK--NRRGPPFAFVEFDDPRDAEDAVHARDG 67
Query: 98 VKFDPQSGSVLHIELARSNS--RKKRKPGSG 126
+D G L +E R ++ R PG G
Sbjct: 68 YDYD---GYRLRVEFPRGSAPGRGSMGPGRG 95
>gi|218196647|gb|EEC79074.1| hypothetical protein OsI_19658 [Oryza sativa Indica Group]
Length = 328
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Query: 24 PPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFV 83
P H T++V LP D+R RE+ +LF + LK R AF F
Sbjct: 18 PTEHGTMSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPG-YAFVEFE 76
Query: 84 NHQTAVAALHELNGVKFDPQSGSVLHIELA 113
+ + A A++ NG FD G L +ELA
Sbjct: 77 DPRDAQDAIYGRNGYDFD---GHRLRVELA 103
>gi|449281934|gb|EMC88877.1| Embryonic polyadenylate-binding protein [Columba livia]
Length = 646
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 106/295 (35%), Gaps = 70/295 (23%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L D + + +++ F C++ G++ F F H+ A
Sbjct: 94 RKSGVGNVFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDENGSRGYGFVHFETHEAATR 153
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGA----------------------- 127
A+ +NG+ + + V H + SRK+R+ GA
Sbjct: 154 AIETMNGMLLNDRKVFVGHFK-----SRKEREAEFGAKAMEFTNVYIKNFGDDMDDDRLR 208
Query: 128 ------------YVVIDK--RTKTEANV-----QESSSADGDSDTDEASPVRNIDSAD-- 166
V++D R+K V +E+ A G S + P+R AD
Sbjct: 209 EIFSKFGKTLSVKVMMDSTGRSKGFGFVNFEKHEEAQKARGSSCCAQRPPLRWQAVADMN 268
Query: 167 ----KGDFVTT-----QSERATDSGNAVAPINSEKP--YEGGVQPCSTLFIANLGPNCTE 215
G V + ER ++ I E+ Y+G L++ NL +
Sbjct: 269 GKEINGRIVYVGRAQKRLERQSELKRKFEQIKQERVSRYQG-----VNLYVKNLDDGIDD 323
Query: 216 DELKQTLSVYPGFNMLKMRARGGMP-----VAFADFEEVEQASIAMEGLQDSTLP 265
D L++ S Y K+ GG V F+ EE +A M G ST P
Sbjct: 324 DRLRKEFSPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKP 378
>gi|166844|gb|AAA32856.1| ribonucleoprotein [Arabidopsis thaliana]
gi|1582992|prf||2119375A Ser/Arg-rich protein
Length = 303
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
T++V LP D+R RE+ +LF + LK R AF F + + A A+H
Sbjct: 7 RTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPG-YAFVEFDDARDAEDAIHGR 65
Query: 96 NGVKFDPQSGSVLHIELARSNSR 118
+G FD G L +ELA R
Sbjct: 66 DGYDFD---GHRLRVELAHGGRR 85
>gi|348570494|ref|XP_003471032.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Cavia
porcellus]
Length = 200
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 59/130 (45%), Gaps = 14/130 (10%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L + + ++N+F C++ +G + F F ++A
Sbjct: 85 RKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAER 144
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGD 150
A+ +NG+ + + I + R S K+R+ GA+ R T A+ + D +
Sbjct: 145 AIDAMNGMFLNYRK-----IFVGRFKSHKEREAERGAWA----RQSTSADCK-----DFE 190
Query: 151 SDTDEASPVR 160
DTDE + +R
Sbjct: 191 EDTDEEATLR 200
>gi|238478568|ref|NP_001154354.1| nucleic acid/nucleotide binding protein [Arabidopsis thaliana]
gi|332191964|gb|AEE30085.1| nucleic acid/nucleotide binding protein [Arabidopsis thaliana]
Length = 253
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
NTL+V GLP + RE+ ++FR G+ +L K+ V+ F F N A
Sbjct: 155 NTLYVEGLPSNCSRREVSHIFRPFVGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAAT 214
Query: 91 ALHELNGVKFD---PQSGSVLHIELARS 115
AL L + D P S +L ++ R+
Sbjct: 215 ALSALQDYRMDEDEPDS-KILRLQFFRN 241
>gi|186478724|ref|NP_173554.3| nucleic acid/nucleotide binding protein [Arabidopsis thaliana]
gi|332191963|gb|AEE30084.1| nucleic acid/nucleotide binding protein [Arabidopsis thaliana]
Length = 421
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL-----KYTGRGNQVVAFATFVNHQTAVA 90
NTL+V GLP + RE+ ++FR G+ +L K+ V+ F F N A
Sbjct: 323 NTLYVEGLPSNCSRREVSHIFRPFVGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAAT 382
Query: 91 ALHELNGVKFD---PQSGSVLHIELARS 115
AL L + D P S +L ++ R+
Sbjct: 383 ALSALQDYRMDEDEPDS-KILRLQFFRN 409
>gi|348538124|ref|XP_003456542.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Oreochromis
niloticus]
Length = 218
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
P LF++NL E L + +PGF +++ G +AF +FE QA +A + L
Sbjct: 142 PNYILFLSNLPEETNEMMLSMLFNQFPGFKEVRL-VPGKHDIAFVEFESDTQAGVAKDAL 200
Query: 260 QDSTLPSSDRGGMHIEYAR 278
Q + ++ M I YA+
Sbjct: 201 QGFRITAT--CAMKITYAK 217
>gi|452001822|gb|EMD94281.1| hypothetical protein COCHEDRAFT_1094167 [Cochliobolus
heterostrophus C5]
Length = 501
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM---RARGGMP-VAFADFEEVEQASIA 255
P +TLFI NL +CT + +++ + Y + + R G + + DF E+A+ A
Sbjct: 346 PSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEATAA 405
Query: 256 MEGLQ 260
+E LQ
Sbjct: 406 LEALQ 410
>gi|121711495|ref|XP_001273363.1| transformer-SR ribonucleoprotein, putative [Aspergillus clavatus
NRRL 1]
gi|119401514|gb|EAW11937.1| transformer-SR ribonucleoprotein, putative [Aspergillus clavatus
NRRL 1]
Length = 311
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 187 PINSEKPY----EGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFN----MLKMRARGG 238
P++S KP EG + P S LF+ + P TE ++ + Y M+ +
Sbjct: 49 PMDSRKPVDDDEEGAINPGSNLFVTGINPRLTESDISRLFEKYGDVENCSIMVDPHTKES 108
Query: 239 MPVAFADFEEVEQASIAMEGLQDSTL 264
F EQA A EGLQ +
Sbjct: 109 RGFGFVKMVTAEQADAAKEGLQGEVI 134
>gi|302774913|ref|XP_002970873.1| hypothetical protein SELMODRAFT_441278 [Selaginella moellendorffii]
gi|300161584|gb|EFJ28199.1| hypothetical protein SELMODRAFT_441278 [Selaginella moellendorffii]
Length = 951
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 182 GNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNML--KMRARGGM 239
GN A + E PY G P TLF+ N+ N + EL+ Y L + RG +
Sbjct: 292 GNTAAVLAGEHPY--GEHPSRTLFVRNINSNVEDVELRALFEQYGAIRTLYTACKHRGFV 349
Query: 240 PVAFADFEEVEQASIAMEGLQDSTL 264
+++ D + A AM LQ+ L
Sbjct: 350 MISYYD---IRAARTAMRALQNKPL 371
>gi|443921864|gb|ELU41399.1| NLI interacting factor-like phosphatase [Rhizoctonia solani AG-1
IA]
Length = 894
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 71/197 (36%), Gaps = 40/197 (20%)
Query: 78 AFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNS---RKKRKPG-------SGA 127
AF F + A AA+ +G F + + IE A++ S R+ +PG
Sbjct: 92 AFVVFQDLAGATAAMRAWDGELFYDKE---MKIEYAKTRSHATRRIEEPGWDPLAEAKAK 148
Query: 128 YVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAP 187
+ + R K EA + + D D D QS N+ P
Sbjct: 149 ALGLGSRLKKEARQGDGEAMDMDDD---------------------QSSNPNPQQNSSVP 187
Query: 188 INSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFE 247
V S L N+ ++D L Q L YPGF L + G A FE
Sbjct: 188 ST-----YSAVTISSRLLCTNIPAETSQDTL-QKLFQYPGFQSLVLTPPGQAKSAQVQFE 241
Query: 248 EVEQASIAMEGLQDSTL 264
+ +QA +A EGL L
Sbjct: 242 QPDQAKVAREGLHGHAL 258
>gi|170591004|ref|XP_001900261.1| RNA-binding protein [Brugia malayi]
gi|158592411|gb|EDP31011.1| RNA-binding protein, putative [Brugia malayi]
Length = 417
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTGRGNQVVAFATFVNHQTAVAALHE 94
L ++ LP ++ E+H LF D C+L K TG+ + F +V + A A+
Sbjct: 51 LIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQ-SLGYGFVNYVRQEDAYKAVTS 109
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTD 154
LNG++ ++ + + AR +S + G+ YV +T ++ +++ G T
Sbjct: 110 LNGLRLQNKT---IKVSFARPSSESIK--GANLYVSGLAKTMSQLDLEALFKPFGQIITS 164
Query: 155 EASPVRNIDSADKG-DFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNC 213
N+ KG FV + +R +++ +A+ +N + P G +P + F + N
Sbjct: 165 RILS-DNVTGISKGVGFV--RFDRKSEAEDAIDKLNGKIP-AGCTEPITVKFANSPAANA 220
Query: 214 TEDELK 219
+ +L+
Sbjct: 221 QKAQLQ 226
>gi|91083715|ref|XP_970185.1| PREDICTED: similar to AGAP005505-PA [Tribolium castaneum]
gi|270007883|gb|EFA04331.1| hypothetical protein TcasGA2_TC014625 [Tribolium castaneum]
Length = 464
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGR--GNQVVAFATFVNHQTAVAALHE 94
T ++ + V ++ LF PG D+C L+ GR N+ VA + + Q A A +
Sbjct: 225 TKLIAIVSPQVNQDQLWKLFDIVPGLDYCHLRLEGRPKPNKGVASVVYNSAQWAAYAKEK 284
Query: 95 LNGVKFDPQSGSVL---HIELARSNSRKKRK 122
L+G ++ P + ++ H E +RS S +++K
Sbjct: 285 LHGFEYPPGNRIIVKPDHEEGSRSTSSERQK 315
>gi|157819927|ref|NP_001102062.1| U2 small nuclear ribonucleoprotein B'' [Rattus norvegicus]
gi|354492046|ref|XP_003508163.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cricetulus
griseus]
gi|149041257|gb|EDL95190.1| rCG27500, isoform CRA_c [Rattus norvegicus]
gi|197245976|gb|AAI68760.1| Small nuclear ribonucleoprotein polypeptide B'' [Rattus norvegicus]
Length = 225
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 97/247 (39%), Gaps = 35/247 (14%)
Query: 37 TLFVSGLPDDVRAREI-HNLFRRKPGF----DFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
T++++ + D ++ E+ +L+ F D LK Q AF F ++ A
Sbjct: 8 TIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQ--AFVIFKELGSSTNA 65
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDS 151
L +L G F G + I+ A+++S +I K T A+ ++
Sbjct: 66 LRQLQGFPF---YGKPMRIQYAKTDSD-----------IISKMRGTFADKEKKKEKKKAK 111
Query: 152 DTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGP 211
++A+ N A GNA AP N + P P LF+ NL
Sbjct: 112 TMEQAAAAANKKPGQ------GTPNSANTQGNA-AP-NPQVP---DYPPNYILFLNNLPE 160
Query: 212 NCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGG 271
E L + +PGF +++ G +AF +FE QA A + LQ + S
Sbjct: 161 ETNEMMLSMLFNQFPGFKEVRL-VPGRHDIAFVEFENDGQAGAARDALQGFKITPSH--A 217
Query: 272 MHIEYAR 278
M I YA+
Sbjct: 218 MKITYAK 224
>gi|5815239|gb|AAD52613.1| splicing factor SR1E [Arabidopsis thaliana]
Length = 270
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
T++V LP D+R RE+ +LF + LK R AF F + + A A+H
Sbjct: 7 RTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPG-YAFVEFDDARDAEDAIHGR 65
Query: 96 NGVKFDPQSGSVLHIELARSNSR 118
+G FD G L +ELA R
Sbjct: 66 DGYDFD---GHRLRVELAHGGRR 85
>gi|402587503|gb|EJW81438.1| hypothetical protein WUBG_07656, partial [Wuchereria bancrofti]
Length = 337
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTGRGNQVVAFATFVNHQTAVAALHE 94
L ++ LP ++ E+H LF D C+L K TG+ + F +V + A A+
Sbjct: 87 LIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQ-SLGYGFVNYVRQEDAYKAVTS 145
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDTD 154
LNG++ ++ + + AR +S + G+ YV +T ++ +++ G T
Sbjct: 146 LNGLRLQNKT---IKVSFARPSSESIK--GANLYVSGLAKTMSQLDLEALFKPFGQIITS 200
Query: 155 EASPVRNIDSADKG-DFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNC 213
N+ KG FV + +R +++ +A+ +N + P G +P + F + N
Sbjct: 201 RILS-DNVTGISKGVGFV--RFDRKSEAEDAIDKLNGKIP-AGCTEPITVKFANSPAANA 256
Query: 214 TEDELK 219
+ +L+
Sbjct: 257 QKAQLQ 262
>gi|348683636|gb|EGZ23451.1| hypothetical protein PHYSODRAFT_484798 [Phytophthora sojae]
Length = 236
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
P LF+ L +C ++ L Y GF ++M G +AF +F + QA+IA++GL
Sbjct: 160 PNKILFLEALPESCNKEMLSVLFKQYQGFKEVRM-VPGKKGLAFVEFGDEAQAAIALQGL 218
Query: 260 QDSTLPSSDRGGMHIEYAR 278
L +D + + +A+
Sbjct: 219 FGFKLTPTD--ALKVSFAK 235
>gi|332026895|gb|EGI66996.1| Heterogeneous nuclear ribonucleoprotein Q [Acromyrmex echinatior]
Length = 724
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 191 EKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVE 250
E+P E + L++ NL +C+E++LK++ Y R + AF FE+ +
Sbjct: 372 EEPDEQTMSKVRVLYVRNLTQDCSEEKLKESFEQYGKIE----RVKKIKDYAFIHFEDRD 427
Query: 251 QASIAMEGLQDSTLPSSDRGGMHIEYARSK 280
A AM + L + GG HIE + +K
Sbjct: 428 NAVKAM-----NELNGKEMGGSHIEVSLAK 452
>gi|195157806|ref|XP_002019785.1| GL12580 [Drosophila persimilis]
gi|194116376|gb|EDW38419.1| GL12580 [Drosophila persimilis]
Length = 117
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 178 ATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLS 223
A + NA P N P PCSTLF+ANLG +E ELK+ S
Sbjct: 74 AGSTNNATHPAN---PQIAANAPCSTLFVANLGQFVSEHELKEVFS 116
>gi|301618964|ref|XP_002938875.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R [Xenopus
(Silurana) tropicalis]
Length = 532
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 104/264 (39%), Gaps = 35/264 (13%)
Query: 22 PPPPYHHQQQDNGINT-LFVSGLPDDVRAREIHNLFRRK-PGFDFCQLKYTGRG-NQVVA 78
PPP GI T +FV +P D+ E+ LF + P +D + G N+ A
Sbjct: 49 PPPESVSSGAQPGIGTEVFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYA 108
Query: 79 FATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTE 138
F TF N + A A+ + + P G + + ++ +N+R +V + KT+
Sbjct: 109 FITFCNKEAAQEAVKLCDNYEIRP--GKHIGVCISVANNR--------LFVGSIPKNKTK 158
Query: 139 ANVQE--SSSADGDSDT------DEASPVRNIDSADKGDFVTT-QSERATDSGNAVAPIN 189
N+ E S +G D D+ R + D T Q+ R SG N
Sbjct: 159 ENILEEFSKVTEGLVDVILYHQPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGN 218
Query: 190 S---------EKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMP 240
E+P + LF+ NL TE+ L++ SV+ R +
Sbjct: 219 VVTVEWADPVEEPDPEIMAKVKVLFVRNLSSTVTEEILEKAFSVFGKLE----RVKKLKD 274
Query: 241 VAFADFEEVEQASIAMEGLQDSTL 264
AF F+E + A AM+ + + L
Sbjct: 275 YAFVHFDERDAAVRAMDEMNGTEL 298
>gi|224082554|ref|XP_002306739.1| predicted protein [Populus trichocarpa]
gi|222856188|gb|EEE93735.1| predicted protein [Populus trichocarpa]
Length = 741
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 183 NAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNML--KMRARGGMP 240
N V + E PY G P TLF+ N+ N + EL+ Y L + RG +
Sbjct: 63 NGVGTVAGEHPY--GEHPSRTLFVRNINSNVEDSELRSLFEQYGDIRTLYTACKHRGFVM 120
Query: 241 VAFADFEEVEQASIAMEGLQDSTL 264
+++ D + A AM LQ+ L
Sbjct: 121 ISYYD---IRDARTAMRALQNKPL 141
>gi|255949670|ref|XP_002565602.1| Pc22g16890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592619|emb|CAP98977.1| Pc22g16890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 724
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 37 TLFVSGLPDDVRAREIHNLFRR----KPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAAL 92
TLFV LP + F + K C + + ++ F TF + + A +AL
Sbjct: 37 TLFVRSLPTSATTESLAEYFSQSYIIKHAVVVCDKET--KASKGFGFVTFADVEDAESAL 94
Query: 93 HELNGVKFDPQSGSVLHIELARSNSR 118
ELNG KFD G V+ ++ A S R
Sbjct: 95 KELNGSKFD---GKVIRVDYAESRKR 117
>gi|2443473|gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana]
Length = 272
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
T++V LP D+R RE+ +LF + LK R AF F + + A A+H
Sbjct: 7 RTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPR-PPGYAFVEFDDARDAEDAIHGR 65
Query: 96 NGVKFDPQSGSVLHIELARSNSR 118
+G FD G L +ELA R
Sbjct: 66 DGYDFD---GHRLRVELAHGGRR 85
>gi|89272515|emb|CAJ81560.1| heterogeneous nuclear ribonucleoprotein R [Xenopus (Silurana)
tropicalis]
Length = 535
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 104/264 (39%), Gaps = 35/264 (13%)
Query: 22 PPPPYHHQQQDNGINT-LFVSGLPDDVRAREIHNLFRRK-PGFDFCQLKYTGRG-NQVVA 78
PPP GI T +FV +P D+ E+ LF + P +D + G N+ A
Sbjct: 52 PPPESVSSGAQPGIGTEVFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYA 111
Query: 79 FATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTE 138
F TF N + A A+ + + P G + + ++ +N+R +V + KT+
Sbjct: 112 FITFCNKEAAQEAVKLCDNYEIRP--GKHIGVCISVANNR--------LFVGSIPKNKTK 161
Query: 139 ANVQE--SSSADGDSDT------DEASPVRNIDSADKGDFVTT-QSERATDSGNAVAPIN 189
N+ E S +G D D+ R + D T Q+ R SG N
Sbjct: 162 ENILEEFSKVTEGLVDVILYHQPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGN 221
Query: 190 S---------EKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMP 240
E+P + LF+ NL TE+ L++ SV+ R +
Sbjct: 222 VVTVEWADPVEEPDPEIMAKVKVLFVRNLSSTVTEEILEKAFSVFGKLE----RVKKLKD 277
Query: 241 VAFADFEEVEQASIAMEGLQDSTL 264
AF F+E + A AM+ + + L
Sbjct: 278 YAFVHFDERDAAVRAMDEMNGTEL 301
>gi|5815237|gb|AAD52611.1| splicing factor SR1C [Arabidopsis thaliana]
Length = 276
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
T++V LP D+R RE+ +LF + LK R AF F + + A A+H
Sbjct: 7 RTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPR-PPGYAFVEFDDARDAEDAIHGR 65
Query: 96 NGVKFDPQSGSVLHIELARSNSR 118
+G FD G L +ELA R
Sbjct: 66 DGYDFD---GHRLRVELAHGGRR 85
>gi|47225636|emb|CAG07979.1| unnamed protein product [Tetraodon nigroviridis]
Length = 382
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 92/210 (43%), Gaps = 18/210 (8%)
Query: 15 HPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTG 71
H P P+ P + + N L V+ LP ++ E +LF + C+L K TG
Sbjct: 28 HGCPSPMQTGPTNDDSKTN----LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 83
Query: 72 RGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVI 131
+ + F +++ + A A++ LNG++ ++ + + AR +S R + YV
Sbjct: 84 Q-SLGYGFVNYIDPKDAEKAINTLNGLRLQTKT---IKVSYARPSSASIRD--ANLYVSG 137
Query: 132 DKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKG-DFVTTQSERATDSGNAVAPINS 190
+T T+ +++ S G T V + +G F+ + ++ ++ A+ +N
Sbjct: 138 LPKTMTQKELEQLFSQYGRIITSRI-LVDQVTGGSRGVGFI--RFDKRVEAEEAIKGLNG 194
Query: 191 EKPYEGGVQPCSTLFIANLGPNCTEDELKQ 220
+KP G +P + F N ++ L Q
Sbjct: 195 QKP-SGAAEPITVKFANNPSQKTSQALLSQ 223
>gi|357464937|ref|XP_003602750.1| Mei2-like protein [Medicago truncatula]
gi|355491798|gb|AES73001.1| Mei2-like protein [Medicago truncatula]
Length = 966
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 13/116 (11%)
Query: 161 NIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEG--------GVQPCSTLFIANLGPN 212
+ D G + + + + SG ++ ++ + Y G G Q TLF+ N+ N
Sbjct: 218 DFDLFSSGGGMELEGDELSASGKRISGLDGDPAYSGAFKGKSSFGEQSSRTLFVGNITSN 277
Query: 213 CTEDELKQTLSVYPGFNML--KMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPS 266
+ ELK Y L + RG + +++ D + AM+ LQ+ TL S
Sbjct: 278 AEDSELKALFEQYGDIRTLYTACKHRGFVMISYYDLRAAQN---AMKALQNRTLSS 330
>gi|207346289|gb|EDZ72828.1| YDR432Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 322
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 24 PPYHHQQQDNGINT-LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATF 82
PP HH+Q+ NT LFV P DV+ E++ +F F +K N AF F
Sbjct: 20 PPMHHRQEGELSNTRLFVRPFPLDVQESELNEIFG-----PFGPMKEVKILNG-FAFVEF 73
Query: 83 VNHQTAVAALHELNGVKFDPQSGSVLHIEL 112
++A A+ E++G F Q V++ +L
Sbjct: 74 EEAESAAKAIEEVHGKSFANQPLEVVYSKL 103
>gi|23956110|ref|NP_067310.1| U2 small nuclear ribonucleoprotein B'' [Mus musculus]
gi|52783420|sp|Q9CQI7.1|RU2B_MOUSE RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|12847289|dbj|BAB27510.1| unnamed protein product [Mus musculus]
gi|12851400|dbj|BAB29026.1| unnamed protein product [Mus musculus]
gi|20072417|gb|AAH26794.1| U2 small nuclear ribonucleoprotein B [Mus musculus]
gi|126035620|gb|ABN72533.1| U2 small nuclear ribonucleoprotein B [Mus spretus]
gi|148696479|gb|EDL28426.1| mCG19497, isoform CRA_c [Mus musculus]
Length = 225
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 97/247 (39%), Gaps = 35/247 (14%)
Query: 37 TLFVSGLPDDVRAREI-HNLFRRKPGF----DFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
T++++ + D ++ E+ +L+ F D LK Q AF F ++ A
Sbjct: 8 TIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQ--AFVIFKELGSSTNA 65
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDS 151
L +L G F G + I+ A+++S +I K T A+ ++
Sbjct: 66 LRQLQGFPF---YGKPMRIQYAKTDSD-----------IISKMRGTFADKEKKKEKKKAK 111
Query: 152 DTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGP 211
++A+ N + A ++ AP N + P P LF+ NL
Sbjct: 112 TMEQAAAAANKKPGQG-------TPNAANTQGTAAP-NPQVP---DYPPNYILFLNNLPE 160
Query: 212 NCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGG 271
E L + +PGF +++ G +AF +FE QA A + LQ + S
Sbjct: 161 ETNEMMLSMLFNQFPGFKEVRL-VPGRHDIAFVEFENDGQAGAARDALQGFKITPSH--A 217
Query: 272 MHIEYAR 278
M I YA+
Sbjct: 218 MKITYAK 224
>gi|189217790|ref|NP_001121335.1| heterogeneous nuclear ribonucleoprotein R [Xenopus laevis]
gi|171847308|gb|AAI61702.1| LOC100158425 protein [Xenopus laevis]
Length = 511
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 106/264 (40%), Gaps = 35/264 (13%)
Query: 22 PPPPYHHQQQDNGINT-LFVSGLPDDVRAREIHNLFRRK-PGFDFCQLKYTGRG-NQVVA 78
PPP GI T +FV +P D+ E+ LF + P +D + G N+ A
Sbjct: 49 PPPESVSSGAQPGIGTEVFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYA 108
Query: 79 FATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTE 138
F TF N + A A+ + ++ ++G + + ++ +N+R +V + KT+
Sbjct: 109 FITFCNKEAAQEAVKLCDN--YEIRTGKHIGVCISVANNR--------LFVGSIPKNKTK 158
Query: 139 ANVQE--SSSADGDSDT------DEASPVRNIDSADKGDFVTT-QSERATDSGNAVAPIN 189
N+ E S +G D D+ R + D T Q+ R SG N
Sbjct: 159 ENILEEFSKVTEGLLDVILYHQPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGN 218
Query: 190 S---------EKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMP 240
E+P + LF+ NL TE+ L++ SV+ R +
Sbjct: 219 VVTVEWADPVEEPDPEIMAKVKVLFVRNLSSTVTEEILEKAFSVFGKLE----RVKKLKD 274
Query: 241 VAFADFEEVEQASIAMEGLQDSTL 264
AF F+E + A AM+ + + L
Sbjct: 275 YAFVHFDERDAAVRAMDEMNGAEL 298
>gi|297707183|ref|XP_002830392.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Pongo
abelii]
Length = 614
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 102/274 (37%), Gaps = 44/274 (16%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L D + + +++ F C++ G++ F F H+ A
Sbjct: 94 RKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQ 153
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTE---ANVQESSSA 147
A++ +NG+ + + V H + SR++R+ GA + + +V E
Sbjct: 154 AINTMNGMLLNDRKVFVGHFK-----SRREREAELGARALEFTNIYVKNLPVDVDEQGLQ 208
Query: 148 DGDSDTDEASPVRNI--DSADKGDFVTTQSERATDSGNAVAPINSEKP-----YEGGVQP 200
D S + V+ + +S F E+ ++ AV +N ++ Y G Q
Sbjct: 209 DLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQK 268
Query: 201 ------------------------CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR 236
L++ NL + +D+L++ S Y K+
Sbjct: 269 RVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE 328
Query: 237 GGMP-----VAFADFEEVEQASIAMEGLQDSTLP 265
GG V F+ EE +A M G T P
Sbjct: 329 GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKP 362
>gi|300796380|ref|NP_001179481.1| U2 small nuclear ribonucleoprotein B'' [Bos taurus]
gi|426240672|ref|XP_004014218.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Ovis
aries]
gi|296481542|tpg|DAA23657.1| TPA: small nuclear ribonucleoprotein polypeptide B'' [Bos taurus]
Length = 218
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 94/247 (38%), Gaps = 42/247 (17%)
Query: 37 TLFVSGLPDDVRAREI-HNLFRRKPGF----DFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
T++++ + D ++ E+ +L+ F D LK Q AF F ++ A
Sbjct: 8 TIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQ--AFVIFKELGSSTNA 65
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDS 151
L +L G F G + I+ A+++S +I K T A+ ++
Sbjct: 66 LRQLQGFPF---YGKPMRIQYAKTDSD-----------IISKMRGTFADKEKKKEKKKAK 111
Query: 152 DTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGP 211
++ + T + A GNA + P P LF+ NL
Sbjct: 112 TVEQTA-------------TTVNKKPANTQGNA-----TPNPQVPDYPPNYILFLNNLPE 153
Query: 212 NCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGG 271
E L + +PGF +++ G +AF +FE QA A + LQ + S
Sbjct: 154 ETNEMMLSMLFNQFPGFKEVRL-VPGRHDIAFVEFENDGQAGAARDALQGFKITPSH--A 210
Query: 272 MHIEYAR 278
M I YA+
Sbjct: 211 MKITYAK 217
>gi|291389004|ref|XP_002711008.1| PREDICTED: small nuclear ribonucleoprotein polypeptide B''
[Oryctolagus cuniculus]
Length = 225
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 95/247 (38%), Gaps = 35/247 (14%)
Query: 37 TLFVSGLPDDVRAREI-HNLFRRKPGF----DFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
T++++ + D ++ E+ +L+ F D LK Q AF F ++ A
Sbjct: 8 TIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQ--AFVIFKELGSSTNA 65
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDS 151
L +L G F G + I+ A+++S +I K T A+ ++
Sbjct: 66 LRQLQGFPF---YGKPMRIQYAKTDSD-----------IISKMRGTFADKEKKKEKKKAK 111
Query: 152 DTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGP 211
++A+ N G + + +S + P P LF+ NL
Sbjct: 112 TVEQAAAAAN---KKPGQVIPNSANNQANS--------TPNPQVPDYPPNYILFLNNLPE 160
Query: 212 NCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGG 271
E L + +PGF +++ G +AF +FE QA A + LQ + S
Sbjct: 161 ETNEMMLSMLFNQFPGFKEVRL-VPGRHDIAFVEFENDGQAGAARDALQGFKITPSH--A 217
Query: 272 MHIEYAR 278
M I YA+
Sbjct: 218 MKITYAK 224
>gi|356548971|ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 409
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 69/162 (42%), Gaps = 33/162 (20%)
Query: 113 ARSNSRKKRKPGSGAYVVIDK---RTKTEANVQESSSADGDSDTDEASPVRNIDSADKGD 169
AR NS K GA VVID+ RTK V+ S DE+ VR + +G
Sbjct: 182 ARYNSVK------GAKVVIDRLTGRTKGYGFVRFS---------DESEQVRAMTEM-QGV 225
Query: 170 FVTTQSERATDSGNAVAPINSE-KPYEGGVQP----------CSTLFIANLGPNCTEDEL 218
+T+ R + N S+ K QP +T+F+ NL PN T+D L
Sbjct: 226 LCSTRPMRIGPASNKTPTTQSQPKASYQNSQPQGSQNENDPNNTTIFVGNLDPNVTDDHL 285
Query: 219 KQTLSVYPGFNMLKMRA--RGGMPVAFADFEEVEQASIAMEG 258
+Q S Y +K+ A R G V FAD E+A + G
Sbjct: 286 RQVFSQYGELVHVKIPAGKRCGF-VQFADRSCAEEALRVLNG 326
>gi|321261626|ref|XP_003195532.1| polyadenylation factor 64 kDasubunit [Cryptococcus gattii WM276]
gi|317462006|gb|ADV23745.1| Polyadenylation factor 64 kDasubunit, putative [Cryptococcus gattii
WM276]
Length = 452
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 33 NGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKY---TGRGNQVVAFATFVNHQTAV 89
N T+FV+ +P DV ++ N+F ++K+ TGR ++ AF F + TA+
Sbjct: 4 NASKTVFVANIPYDVSEEQLANVFSEAGPVANVEIKFDANTGR-SKGYAFVQFYDEATAL 62
Query: 90 AALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSG 126
+A+ L P +G L +EL+ +R+ G+G
Sbjct: 63 SAVRNLQDA---PVNGRNLRVELSTDEPGPRRR-GAG 95
>gi|407918303|gb|EKG11574.1| hypothetical protein MPH_11067 [Macrophomina phaseolina MS6]
Length = 684
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 181 SGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVY---PGFNMLKMRARG 237
S + + P N++ + P + LF+A+L + ++ EL Q L+ G +K++
Sbjct: 208 SSDKITPDNAQS----RLSPNACLFVASLRKDKSDSELHQALTAQFFAYGKCYIKVKRTR 263
Query: 238 GMPVAFADFEEVEQASIAME 257
G+P+AF + E A +AME
Sbjct: 264 GLPIAFVQYHESATADVAME 283
>gi|212539754|ref|XP_002150032.1| transformer-SR ribonucleoprotein, putative [Talaromyces marneffei
ATCC 18224]
gi|210067331|gb|EEA21423.1| transformer-SR ribonucleoprotein, putative [Talaromyces marneffei
ATCC 18224]
Length = 341
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 48/128 (37%), Gaps = 22/128 (17%)
Query: 144 SSSADGDSDTDE---ASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQP 200
S+S GDS D SP R D A GD + P++ E EG V P
Sbjct: 24 SASPRGDSRADRDRSLSPSRGDDRAPAGD-------------SRKPPVDDED--EGAVNP 68
Query: 201 CSTLFIANLGPNCTEDELKQTLSVYPGFN----MLKMRARGGMPVAFADFEEVEQASIAM 256
S LF+ + P TE ++ + Y ML + F EQA A
Sbjct: 69 GSNLFVTGIHPRLTEADISRLFEKYGDVENCSIMLDPHTKESRGFGFVKMVTAEQADAAK 128
Query: 257 EGLQDSTL 264
EGLQ +
Sbjct: 129 EGLQGEVI 136
>gi|327271181|ref|XP_003220366.1| PREDICTED: ELAV-like protein 4-like [Anolis carolinensis]
Length = 410
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 88/202 (43%), Gaps = 14/202 (6%)
Query: 23 PPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTGRGNQVVAF 79
P P D+ L V+ LP ++ E +LF + C+L K TG+ + F
Sbjct: 77 PSPMQTAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ-SLGYGF 135
Query: 80 ATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEA 139
+++ + A A++ LNG++ ++ + + AR +S R + YV +T T+
Sbjct: 136 VNYIDPKDAEKAINTLNGLRLQTKT---IKVSYARPSSASIRD--ANLYVSGLPKTMTQK 190
Query: 140 NVQESSSADGDSDTDEASPVRNIDSADKG-DFVTTQSERATDSGNAVAPINSEKPYEGGV 198
+++ S G T V + +G F+ + ++ ++ A+ +N +KP G
Sbjct: 191 ELEQLFSQYGRIITSRI-LVDQVTGVSRGVGFI--RFDKRIEAEEAIKGLNGQKP-SGAT 246
Query: 199 QPCSTLFIANLGPNCTEDELKQ 220
+P + F N ++ L Q
Sbjct: 247 EPITVKFANNPSQKTSQALLSQ 268
>gi|256092018|ref|XP_002581797.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 194
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
++V LP D + R+I NLF + LK R AF F + A A+ +G
Sbjct: 12 IYVGNLPPDTKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDAVRGRDG 71
Query: 98 VKFDPQSGSVLHIELARSN--SRKKRKPGSGA 127
FD G L +EL R+ R+ + G GA
Sbjct: 72 YNFD---GYALRVELPRTGVPERRFNRGGGGA 100
>gi|426391820|ref|XP_004062264.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Gorilla
gorilla gorilla]
Length = 614
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 102/274 (37%), Gaps = 44/274 (16%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L D + + +++ F C++ G++ F F H+ A
Sbjct: 94 RKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQ 153
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTE---ANVQESSSA 147
A++ +NG+ + + V H + SR++R+ GA + + +V E
Sbjct: 154 AINTMNGMLLNDRKVFVGHFK-----SRREREAELGARALEFTNIYVKNLPVDVDEQGLQ 208
Query: 148 DGDSDTDEASPVRNI--DSADKGDFVTTQSERATDSGNAVAPINSEKP-----YEGGVQP 200
D S + V+ + +S F E+ ++ AV +N ++ Y G Q
Sbjct: 209 DLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQK 268
Query: 201 ------------------------CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR 236
L++ NL + +D+L++ S Y K+
Sbjct: 269 RVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE 328
Query: 237 GGMP-----VAFADFEEVEQASIAMEGLQDSTLP 265
GG V F+ EE +A M G T P
Sbjct: 329 GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKP 362
>gi|344995668|ref|YP_004798011.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963887|gb|AEM73034.1| glycoside hydrolase starch-binding [Caldicellulosiruptor
lactoaceticus 6A]
Length = 1097
Score = 38.5 bits (88), Expect = 3.6, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 64/166 (38%), Gaps = 24/166 (14%)
Query: 97 GVKFDPQSGSVLHIELARSNSRKKRK--------PGSGAYVVIDKRTKTEANVQESSSAD 148
VK Q+ V++IE + K++ P + +V I K ++ VQ S+
Sbjct: 644 AVKNSQQAYPVVNIERQAVETLKEKGVKRIEVKYPDTSVFVDIYKSVASDIQVQAFQSSK 703
Query: 149 GDSDTDEASPVRNIDSADK------GDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCS 202
+ T E+ ++N+D +F + E S N + P E GV PC
Sbjct: 704 EEFKTTESQLLKNVDDYTTVKIIAMKEFKIIRGEELDTSSNTIYVFKFNSPVEDGVVPC- 762
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEE 248
I N D + Y N L ++ +G +AFA E+
Sbjct: 763 ---IIN------NDNIIPVKDYYTEDNYLVVKVKGSQKIAFAKVEK 799
>gi|449512082|ref|XP_002199484.2| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Taeniopygia
guttata]
Length = 221
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 79/201 (39%), Gaps = 28/201 (13%)
Query: 78 AFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKT 137
AF F ++ AL +L G F G +HI+ A+++S +I K T
Sbjct: 48 AFVIFKELGSSTNALRQLQGFPF---YGKPMHIQYAKTDSD-----------IISKMRGT 93
Query: 138 EANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGG 197
A+ +E+ + T E S +G + S T N V P N
Sbjct: 94 FAD-KENRKEKKKAQTLEQSANAPNKKVIQGATQNSASAPGTTPQNQV-PDNP------- 144
Query: 198 VQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAME 257
P LF+ NL E L + +PGF +++ G +AF +FE QA A +
Sbjct: 145 --PDYILFLNNLPEETNEMMLSMLFNQFPGFKEVRL-VPGRHDIAFVEFENENQAGAARD 201
Query: 258 GLQDSTLPSSDRGGMHIEYAR 278
LQ + S M I YA+
Sbjct: 202 ALQGFKITPSH--AMKITYAK 220
>gi|2288985|gb|AAB64314.1| hypothetical protein [Arabidopsis thaliana]
Length = 1056
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 16/91 (17%)
Query: 198 VQPCSTLFIANLGPNCTEDELKQTLSVY---PGFNMLKMRARGGMPVAFADFEEVEQASI 254
+PC +L++ +GPN ++D+L++ S + F L+ R AF D+ E++ A
Sbjct: 246 AKPCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRERK-----TAFIDYYEMDDA-- 298
Query: 255 AMEGLQDSTLPSSDRGG--MHIEYARSKMRK 283
LQ ++ GG + +++ RS+ K
Sbjct: 299 ----LQAKSMNGKPMGGSFLRVDFLRSQAPK 325
>gi|313225077|emb|CBY20870.1| unnamed protein product [Oikopleura dioica]
gi|313245842|emb|CBY34831.1| unnamed protein product [Oikopleura dioica]
Length = 272
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
L VS +P R ++ +F + ++ + RG++ F ++ + A A E+N
Sbjct: 132 LHVSNIPFRFREPDLREMFEKFGKITEVEIIFNDRGSKGFGFVSYADKDDADRAKREINH 191
Query: 98 VKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVI 131
K D G ++ + A + ++ KR P S V++
Sbjct: 192 TKID---GRMIEVNDATARNKSKRGPASTQQVMM 222
>gi|333978650|ref|YP_004516595.1| acetyl-CoA acetyltransferase [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822131|gb|AEG14794.1| acetyl-CoA acetyltransferase [Desulfotomaculum kuznetsovii DSM
6115]
Length = 393
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 180 DSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM 239
D A+ ++ EK +E G++P +T+ LG + K +V PG ++ K+ A+ G+
Sbjct: 251 DGAGALVLMSREKAHELGIKPLATI----LGHASVSQDAKYIATV-PGLSINKLLAKKGL 305
Query: 240 PVAFADFEEVEQ--ASIAMEGLQDSTLP 265
PV D EV + A++ + ++ + LP
Sbjct: 306 PVDAIDLFEVNEAFAAVVLVSVKIANLP 333
>gi|61661314|gb|AAX51263.1| FPA [Arabidopsis thaliana]
Length = 1056
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 16/91 (17%)
Query: 198 VQPCSTLFIANLGPNCTEDELKQTLSVY---PGFNMLKMRARGGMPVAFADFEEVEQASI 254
+PC +L++ +GPN ++D+L++ S + F L+ R AF D+ E++ A
Sbjct: 246 AKPCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRERK-----TAFIDYYEMDDA-- 298
Query: 255 AMEGLQDSTLPSSDRGG--MHIEYARSKMRK 283
LQ ++ GG + +++ RS+ K
Sbjct: 299 ----LQAKSMNGKPMGGSFLRVDFLRSQAPK 325
>gi|224078006|ref|XP_002190593.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Taeniopygia guttata]
Length = 629
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L D + + +++ F C++ G++ F F H+ A
Sbjct: 94 RKSGVGNVFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDENGSRGYGFVHFETHEAATR 153
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVV 130
A+ +NG+ + + V H + SRK+R+ GA +
Sbjct: 154 AIETMNGMLLNDRKVFVGHFK-----SRKEREAEVGARAI 188
>gi|185135971|ref|NP_001118228.1| polyadenylate-binding protein 1-like [Homo sapiens]
gi|74754038|sp|Q4VXU2.1|PAP1L_HUMAN RecName: Full=Polyadenylate-binding protein 1-like
gi|119596298|gb|EAW75892.1| hCG2019100, isoform CRA_f [Homo sapiens]
Length = 614
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 102/274 (37%), Gaps = 44/274 (16%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L D + + +++ F C++ G++ F F H+ A
Sbjct: 94 RKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQ 153
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTE---ANVQESSSA 147
A++ +NG+ + + V H + SR++R+ GA + + +V E
Sbjct: 154 AINTMNGMLLNDRKVFVGHFK-----SRREREAELGARALEFTNIYVKNLPVDVDEQGLQ 208
Query: 148 DGDSDTDEASPVRNI--DSADKGDFVTTQSERATDSGNAVAPINSEKP-----YEGGVQP 200
D S + V+ + +S F E+ ++ AV +N ++ Y G Q
Sbjct: 209 DLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQK 268
Query: 201 ------------------------CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR 236
L++ NL + +D+L++ S Y K+
Sbjct: 269 RVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE 328
Query: 237 GGMP-----VAFADFEEVEQASIAMEGLQDSTLP 265
GG V F+ EE +A M G T P
Sbjct: 329 GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKP 362
>gi|47203440|emb|CAG13908.1| unnamed protein product [Tetraodon nigroviridis]
Length = 41
Score = 38.1 bits (87), Expect = 3.9, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGR 72
+ TLFVSGLP D++ RE++ LFR G++ +K T +
Sbjct: 2 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSK 39
>gi|392575524|gb|EIW68657.1| hypothetical protein TREMEDRAFT_71869 [Tremella mesenterica DSM
1558]
Length = 389
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
TLF+ NLGP T+ EL Y ++M+A G AF + + A AM LQ++
Sbjct: 251 TLFVGNLGPYVTQAELTPLFQTYGYVTDIRMQADRGY--AFVKLDTSQAAVSAMATLQNT 308
Query: 263 TLPSSDRGGMHIEYARSK 280
+ + I++ R K
Sbjct: 309 MVQGRP---LKIQWGREK 323
>gi|168028479|ref|XP_001766755.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681964|gb|EDQ68386.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 235
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEGLQ 260
+ LF+ NL T ++ +PGF ++M A+ G +AF +F + QA++A++GL
Sbjct: 161 NILFVQNLPHEATSLAIQVLFQQFPGFKEVRMIEAKPG--IAFVEFGDELQATVALQGLH 218
Query: 261 DSTLPSSDRGGMHIEYAR 278
+ + + M + YA+
Sbjct: 219 NFKITPNQ--AMQVSYAK 234
>gi|323450983|gb|EGB06862.1| hypothetical protein AURANDRAFT_28680 [Aureococcus anophagefferens]
Length = 214
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
P + LF +L +C + L Y GF ++M G +AF +F + QAS+A++GL
Sbjct: 138 PSNVLFAQDLPDDCNDMMLSILFQQYGGFKEVRM-VPGKKGIAFVEFADETQASLALQGL 196
Query: 260 QDSTLPSSD 268
+ L +D
Sbjct: 197 DNFKLTPTD 205
>gi|12850013|dbj|BAB28565.1| unnamed protein product [Mus musculus]
Length = 225
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 98/248 (39%), Gaps = 35/248 (14%)
Query: 36 NTLFVSGLPDDVRAREI-HNLFRRKPGF----DFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+T++++ + D ++ E+ +L+ F D LK Q AF F ++
Sbjct: 7 HTIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQ--AFVIFKELGSSTN 64
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGD 150
AL +L G F G + I+ A+++S +I K T A+ ++
Sbjct: 65 ALRQLQGFPF---YGKPMRIQYAKTDSD-----------IISKMRGTFADKEKKKEKKKA 110
Query: 151 SDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLG 210
++A+ N + A ++ AP N + P P LF+ NL
Sbjct: 111 KTMEQAAAAANKKPGQG-------TPNAANTQGTAAP-NPQVP---DYPPNYILFLNNLP 159
Query: 211 PNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRG 270
E L + +PGF +++ G +AF +FE QA A + LQ + S
Sbjct: 160 EETNEMMLSMLFNQFPGFKEVRL-VPGRHDIAFVEFEYDGQAGAARDALQGFKITPSH-- 216
Query: 271 GMHIEYAR 278
M I YA+
Sbjct: 217 AMKITYAK 224
>gi|5815236|gb|AAD52610.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 289
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELN 96
T++V LP D+R RE+ +LF + LK R AF F + + A A+H +
Sbjct: 8 TVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPG-YAFVEFDDARDAEDAIHGRD 66
Query: 97 GVKFDPQSGSVLHIELARSNSR 118
G FD G L +ELA R
Sbjct: 67 GYDFD---GHRLRVELAHGGRR 85
>gi|30678395|ref|NP_850934.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|22135918|gb|AAM91541.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|30023782|gb|AAP13424.1| At1g02840 [Arabidopsis thaliana]
gi|332189357|gb|AEE27478.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 285
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELN 96
T++V LP D+R RE+ +LF + LK R AF F + + A A+H +
Sbjct: 8 TVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPG-YAFVEFDDARDAEDAIHGRD 66
Query: 97 GVKFDPQSGSVLHIELARSNSR 118
G FD G L +ELA R
Sbjct: 67 GYDFD---GHRLRVELAHGGRR 85
>gi|358394186|gb|EHK43587.1| hypothetical protein TRIATDRAFT_85620 [Trichoderma atroviride IMI
206040]
Length = 1057
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 189 NSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVY---PGFNMLKMRARGGMPVAFAD 245
N ++ EG V + ++ LGP+ TEDE+++ S Y N+ + G AF D
Sbjct: 747 NRKRNREGAVAEGREVHVSGLGPSTTEDEIREIFSKYGTIARINVPRSDNGKGRGFAFID 806
Query: 246 FEEVEQASIAMEGL 259
FE +QA A L
Sbjct: 807 FETKDQAEKAASEL 820
>gi|115446801|ref|NP_001047180.1| Os02g0567900 [Oryza sativa Japonica Group]
gi|113536711|dbj|BAF09094.1| Os02g0567900, partial [Oryza sativa Japonica Group]
Length = 259
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
T+++ L PN TEDEL++ + Y +K+ G F F A A++GL S
Sbjct: 132 TIYVGGLDPNATEDELRKAFAKYGDLASVKIPV--GKQCGFVQFVNRPDAEEALQGLNGS 189
Query: 263 TL 264
T+
Sbjct: 190 TI 191
>gi|320581385|gb|EFW95606.1| single-stranded nucleic acid binding protein, putative [Ogataea
parapolymorpha DL-1]
Length = 315
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 28/137 (20%)
Query: 145 SSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINS----EKPYEGGVQP 200
S +D SD+ EASP AD+ + +T +E A A P+ S +K GV
Sbjct: 155 SESDAKSDSKEASP------ADQSE--STSAESAAPVKKARKPVLSKEEKQKKLSEGVPS 206
Query: 201 CSTLFIANLGPNCTEDELKQTLSVY------------PGFNMLKMRARG----GMPVAFA 244
+TLF+ NL + T +LK+ + Y P LK++AR +AF
Sbjct: 207 KTTLFLGNLDKSVTSKDLKELFAEYEPVWIRVPRRELPKNLYLKLKARNVQIDNKGIAFV 266
Query: 245 DFEEVEQASIAMEGLQD 261
F+ E A++ ++
Sbjct: 267 RFKSEEDQQKALKEFEN 283
>gi|428183363|gb|EKX52221.1| hypothetical protein GUITHDRAFT_41825, partial [Guillardia theta
CCMP2712]
Length = 195
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
++V LP D+R R+I +LF + ++K R AF +F +++ A A+ +G
Sbjct: 1 IYVGNLPLDIRTRDIEDLFYKYGRIRDIEVKTPNR-PPAFAFVSFEDYRDAEDAIRGRDG 59
Query: 98 VKFDPQSGSVLHIELARSN 116
+ F+ G+ L E++R N
Sbjct: 60 ISFE---GARLRCEMSRGN 75
>gi|119596297|gb|EAW75891.1| hCG2019100, isoform CRA_e [Homo sapiens]
Length = 617
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 102/274 (37%), Gaps = 44/274 (16%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L D + + +++ F C++ G++ F F H+ A
Sbjct: 94 RKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQ 153
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTE---ANVQESSSA 147
A++ +NG+ + + V H + SR++R+ GA + + +V E
Sbjct: 154 AINTMNGMLLNDRKVFVGHFK-----SRREREAELGARALEFTNIYVKNLPVDVDEQGLQ 208
Query: 148 DGDSDTDEASPVRNI--DSADKGDFVTTQSERATDSGNAVAPINSEKP-----YEGGVQP 200
D S + V+ + +S F E+ ++ AV +N ++ Y G Q
Sbjct: 209 DLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQK 268
Query: 201 ------------------------CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR 236
L++ NL + +D+L++ S Y K+
Sbjct: 269 RVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE 328
Query: 237 GGMP-----VAFADFEEVEQASIAMEGLQDSTLP 265
GG V F+ EE +A M G T P
Sbjct: 329 GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKP 362
>gi|26325114|dbj|BAC26311.1| unnamed protein product [Mus musculus]
Length = 707
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 199 QPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMP-VAFADFEEVEQASIAME 257
QP TLF+ L N TE+ LK++ ++ R G F DF E A A E
Sbjct: 566 QPSKTLFVKGLSENTTEETLKESFEGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKE 625
Query: 258 GLQDSTLPSSDRGGMHIEYARSK 280
++D + D + +++A+ K
Sbjct: 626 AMEDGEI---DGNKVTLDWAKPK 645
>gi|444729539|gb|ELW69952.1| U2 small nuclear ribonucleoprotein B'' [Tupaia chinensis]
Length = 225
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 98/247 (39%), Gaps = 35/247 (14%)
Query: 37 TLFVSGLPDDVRAREI-HNLFRRKPGF----DFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
T++++ + D ++ E+ +L+ F D LK Q AF F ++ A
Sbjct: 8 TIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQ--AFVIFKELGSSTNA 65
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDS 151
L +L G F G + I+ A+++S +I K T A+ ++
Sbjct: 66 LRQLQGFPF---YGKPMRIQYAKTDSD-----------IISKMRGTFADKEKKKEKKKAK 111
Query: 152 DTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGP 211
++A+ +A+K T + T + P + P P LF+ NL
Sbjct: 112 TVEQAA-----TTANKKPGQGTPNSANTQGNSTPNPQVPDYP------PNYILFLNNLPE 160
Query: 212 NCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGG 271
E L + +PGF +++ G +AF +FE QA A + LQ + S
Sbjct: 161 ETNEMMLSMLFNQFPGFKEVRL-VPGRHDIAFVEFENDGQAGAARDALQGFKITPSH--A 217
Query: 272 MHIEYAR 278
M I YA+
Sbjct: 218 MKITYAK 224
>gi|46806694|dbj|BAD17764.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
Length = 396
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
T+++ L PN TEDEL++ + Y +K+ G F F A A++GL S
Sbjct: 269 TIYVGGLDPNATEDELRKAFAKYGDLASVKIPV--GKQCGFVQFVNRPDAEEALQGLNGS 326
Query: 263 TLPSSDRGGMHIEYARS 279
T+ + + + + RS
Sbjct: 327 TI---GKQAVRLSWGRS 340
>gi|322695665|gb|EFY87469.1| transformer-SR ribonucleoprotein [Metarhizium acridum CQMa 102]
Length = 328
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 49/119 (41%), Gaps = 13/119 (10%)
Query: 150 DSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVA----PINSEKPYEGGVQPCSTLF 205
D D ASP D D G + A+ +GNA A P S+ +G V P S LF
Sbjct: 24 DRDNRSASPRPPRDENDGG-----RRRSASPNGNADAIPKEPSGSKDDDDGAVNPGSNLF 78
Query: 206 IANLGPNCTEDELKQTLSVYPGFNMLK-MR---ARGGMPVAFADFEEVEQASIAMEGLQ 260
+ + P TE E+ + Y + MR ++ F EQA A EGLQ
Sbjct: 79 VTGIHPRLTEAEVSKMFEKYGDVEKCQIMRDPHSKESRGFGFVKMVTSEQAEAAKEGLQ 137
>gi|389747109|gb|EIM88288.1| hypothetical protein STEHIDRAFT_167602 [Stereum hirsutum FP-91666
SS1]
Length = 1172
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 215 EDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDR-GGMH 273
E+ L++ PGF L R + P+ F +F +V A+ A+ L +TL + GG+
Sbjct: 944 EESLRELFQRRPGFRKLCFRQKSNGPMCFVEFADVSYATRALNDLYGATLNGLVKGGGIR 1003
Query: 274 IEYARSKM 281
+ Y+++ +
Sbjct: 1004 LSYSKNPL 1011
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLK 68
I+T+FV G P+D++ RE N+F GF+ LK
Sbjct: 422 ISTIFVVGFPEDMQEREFQNMFTFSAGFEAATLK 455
>gi|388505956|gb|AFK41044.1| unknown [Lotus japonicus]
Length = 232
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKM-----RARGGMP--VAFADFEEVEQASI 254
STLF+ L NC E+ + G+ +++ R GG P + F DFE A+
Sbjct: 131 STLFVEGLPTNCPRREVAHIFRPFVGYKEVRLVSKESRQPGGDPLVLCFVDFESPAHAAT 190
Query: 255 AMEGLQDSTLPSSDRGGMHIEY 276
A + LQ DR ++ +
Sbjct: 191 AKDALQGYKFDELDRNSANLRF 212
>gi|226372064|gb|ACO51657.1| U1 small nuclear ribonucleoprotein A [Rana catesbeiana]
Length = 279
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
P LF+ NL E L + +PGF +++ G +AF +FE QA A E L
Sbjct: 203 PNHILFLTNLPEETNELMLSMLFNQFPGFKEVRL-VPGRHDIAFVEFENEVQAGAARESL 261
Query: 260 QDSTLPSSDRGGMHIEYAR 278
Q + S+ M I +A+
Sbjct: 262 QGFKITQSN--SMKISFAK 278
>gi|355563109|gb|EHH19671.1| Polyadenylate-binding protein 1-like protein [Macaca mulatta]
Length = 614
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 102/274 (37%), Gaps = 44/274 (16%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L D + + +++ F C++ G++ F F H+ A
Sbjct: 94 RKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEAAQQ 153
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTE---ANVQESSSA 147
A++ +NG+ + + V H + SR++R+ GA + + +V E
Sbjct: 154 AINTMNGMLLNDRKVFVGHFK-----SRREREAELGARALEFTNIYVKNLPVDVDEQGLQ 208
Query: 148 DGDSDTDEASPVRNI--DSADKGDFVTTQSERATDSGNAVAPINSEKP-----YEGGVQP 200
D S + V+ + +S F E+ ++ AV +N ++ Y G Q
Sbjct: 209 DLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQK 268
Query: 201 ------------------------CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR 236
L++ NL + +D+L++ S Y K+
Sbjct: 269 RVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE 328
Query: 237 GGMP-----VAFADFEEVEQASIAMEGLQDSTLP 265
GG V F+ EE +A M G T P
Sbjct: 329 GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKP 362
>gi|56758822|gb|AAW27551.1| SJCHGC05822 protein [Schistosoma japonicum]
gi|226469552|emb|CAX76606.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469554|emb|CAX76607.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469556|emb|CAX76608.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469558|emb|CAX76609.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469560|emb|CAX76610.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469562|emb|CAX76611.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469564|emb|CAX76612.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472960|emb|CAX71166.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472964|emb|CAX71168.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472966|emb|CAX71169.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
Length = 225
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
+ ++V LP D + R+I NLF + LK R AF F + A A+
Sbjct: 6 HKIYVGNLPPDAKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDAVRGR 65
Query: 96 NGVKFDPQSGSVLHIELARSNS 117
+G FD G L +EL R+ S
Sbjct: 66 DGYNFD---GYALRVELPRTGS 84
>gi|218191015|gb|EEC73442.1| hypothetical protein OsI_07730 [Oryza sativa Indica Group]
Length = 312
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDS 262
T+++ L PN TEDEL++ + Y +K+ G F F A A++GL S
Sbjct: 185 TIYVGGLDPNATEDELRKAFAKYGDLASVKIPV--GKQCGFVQFVNRPDAEEALQGLNGS 242
Query: 263 TL 264
T+
Sbjct: 243 TI 244
>gi|302565150|ref|NP_001181379.1| polyadenylate-binding protein 1-like [Macaca mulatta]
Length = 614
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 102/274 (37%), Gaps = 44/274 (16%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L D + + +++ F C++ G++ F F H+ A
Sbjct: 94 RKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEAAQQ 153
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTE---ANVQESSSA 147
A++ +NG+ + + V H + SR++R+ GA + + +V E
Sbjct: 154 AINTMNGMLLNDRKVFVGHFK-----SRREREAELGARALEFTNIYVKNLPVDVDEQGLQ 208
Query: 148 DGDSDTDEASPVRNI--DSADKGDFVTTQSERATDSGNAVAPINSEKP-----YEGGVQP 200
D S + V+ + +S F E+ ++ AV +N ++ Y G Q
Sbjct: 209 DLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQK 268
Query: 201 ------------------------CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR 236
L++ NL + +D+L++ S Y K+
Sbjct: 269 RVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE 328
Query: 237 GGMP-----VAFADFEEVEQASIAMEGLQDSTLP 265
GG V F+ EE +A M G T P
Sbjct: 329 GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKP 362
>gi|224123814|ref|XP_002330215.1| predicted protein [Populus trichocarpa]
gi|222871671|gb|EEF08802.1| predicted protein [Populus trichocarpa]
Length = 226
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELN 96
TL+V LP D+R RE+ +LF + LK R AF F + A A+ L+
Sbjct: 7 TLYVGNLPGDIRVREVEDLFYKYGPIVDIDLKIPPRPPG-YAFVEFEDAHDAKYAIRGLD 65
Query: 97 GVKFDPQSGSVLHIELARSNSR 118
G FD L +ELA R
Sbjct: 66 GYNFD---ACRLRVELAHGGRR 84
>gi|402882426|ref|XP_003904744.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 614
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 102/274 (37%), Gaps = 44/274 (16%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L D + + +++ F C++ G++ F F H+ A
Sbjct: 94 RKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEAAQQ 153
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTE---ANVQESSSA 147
A++ +NG+ + + V H + SR++R+ GA + + +V E
Sbjct: 154 AINTMNGMLLNDRKVFVGHFK-----SRREREAELGARALEFTNIYVKNLPVDVDEQGLQ 208
Query: 148 DGDSDTDEASPVRNI--DSADKGDFVTTQSERATDSGNAVAPINSEKP-----YEGGVQP 200
D S + V+ + +S F E+ ++ AV +N ++ Y G Q
Sbjct: 209 DLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQK 268
Query: 201 ------------------------CSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRAR 236
L++ NL + +D+L++ S Y K+
Sbjct: 269 RVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE 328
Query: 237 GGMP-----VAFADFEEVEQASIAMEGLQDSTLP 265
GG V F+ EE +A M G T P
Sbjct: 329 GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKP 362
>gi|84996527|ref|XP_952985.1| splicing factor [Theileria annulata strain Ankara]
gi|65303981|emb|CAI76360.1| splicing factor, putative [Theileria annulata]
Length = 269
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 35 INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHE 94
I+ +++ LP+D RE+ F + +C LK + G+ AF F + + A A+ +
Sbjct: 6 ISRIYIGNLPEDCSQRELEEEFEKFGRIIYCDLKKSYSGSP-FAFIEFSDSRDARDAIRD 64
Query: 95 LNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAY 128
+G +F G L +EL + R+P S Y
Sbjct: 65 KDGYEF---HGKKLRVELPFRYRDEPRRPSSRRY 95
>gi|302871232|ref|YP_003839868.1| glycoside hydrolase family protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302574091|gb|ADL41882.1| glycoside hydrolase starch-binding [Caldicellulosiruptor
obsidiansis OB47]
Length = 1097
Score = 37.7 bits (86), Expect = 5.2, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 16/134 (11%)
Query: 121 RKPGSGAYVVIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADK------GDFVTTQ 174
+ P + +V I K ++ VQ S+ ++ T E+ ++N+D +F +
Sbjct: 676 KYPDTSVFVDIYKSVTSDIQVQAFQSSKEENKTAESLLLKNVDDYTTVKVIGMKEFKIIR 735
Query: 175 SERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMR 234
E S N + P E GV PC I N D + Y + L ++
Sbjct: 736 GEELDTSSNTIYVFKFNSPVEEGVVPC----IIN------NDNITPVKDYYTEDSYLVVK 785
Query: 235 ARGGMPVAFADFEE 248
A+G +AFA E+
Sbjct: 786 AKGSQKIAFAKVEK 799
>gi|123994687|gb|ABM84945.1| small nuclear ribonucleoprotein polypeptide B'' [synthetic
construct]
gi|261861662|dbj|BAI47353.1| small nuclear ribonucleoprotein polypeptide B'' [synthetic
construct]
Length = 225
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 94/247 (38%), Gaps = 35/247 (14%)
Query: 37 TLFVSGLPDDVRAREI-HNLFRRKPGF----DFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
T++++ + D ++ E+ +L+ F D LK Q AF F ++ A
Sbjct: 8 TIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQ--AFVIFKELGSSTNA 65
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDS 151
L +L G F G + I+ A+++S +I K T A+ ++
Sbjct: 66 LRQLQGFPF---YGKPMRIQYAKTDSD-----------IISKMRGTFADKEKKKEKKKAK 111
Query: 152 DTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGP 211
++ + N S A GN+ + P P LF+ NL
Sbjct: 112 TVEQTATTTNKKSGQG------TPNSANTQGNS-----TPNPQVPDYPPNYILFLNNLPE 160
Query: 212 NCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGG 271
E L + +PGF +++ G +AF +FE QA A + LQ + S
Sbjct: 161 ETNEMMLSMLFNQFPGFKEVRL-VPGRHDIAFVEFENDGQAGAARDALQGFKITPSH--A 217
Query: 272 MHIEYAR 278
M I YA+
Sbjct: 218 MKITYAK 224
>gi|399219025|emb|CCF75912.1| unnamed protein product [Babesia microti strain RI]
Length = 227
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
++V LP + REI F + C +K G+ AF F + + A A+ E +G
Sbjct: 10 VYVGNLPSECDQREIEEEFEKFGKIKRCDVKRGANGSS-FAFVEFEDPRDAKDAIKEKDG 68
Query: 98 VKFDPQSGSVLHIEL---ARSNSRKKRKPGSGAYVV 130
+F GS L +E+ R SR++ P G Y V
Sbjct: 69 YEF---KGSRLRVEVPFSDRGYSRRRPTPRRGHYTV 101
>gi|393219661|gb|EJD05148.1| hypothetical protein FOMMEDRAFT_18782 [Fomitiporia mediterranea
MF3/22]
Length = 828
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 49/124 (39%), Gaps = 20/124 (16%)
Query: 155 EASPVRNIDSADKGDFVTTQSERATDSGNAV---APINSEKPYEGGVQPCSTLFIANLGP 211
E +PV + + D TTQ+ R T + V PI+ K E P STLF+ NL
Sbjct: 550 EKAPVGVFNGSRSSDNTTTQAIRPTPAKQDVDIAGPIDDAKEEE--APPGSTLFLKNLAF 607
Query: 212 NCTEDELKQTLSVYPGFNMLKMRA---------------RGGMPVAFADFEEVEQASIAM 256
T + L L PGF+ +++ R M F F + A A+
Sbjct: 608 ATTSERLTSVLRHLPGFSFARVQTKPDPKRPSIPGQPPPRLSMGFGFVGFTSKDAAKTAL 667
Query: 257 EGLQ 260
+Q
Sbjct: 668 RSIQ 671
>gi|403419677|emb|CCM06377.1| predicted protein [Fibroporia radiculosa]
Length = 582
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 199 QPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRA--RGGMPVAFA--DFEEVEQASI 254
+P + LF+ NL + TED L +T S Y +++ G P FA +F +VE A
Sbjct: 411 EPSAVLFVGNLSFSATEDLLWETFSEYGDVKSVRVPTDRETGSPKGFAYVEFSDVETAKS 470
Query: 255 AMEGL 259
A EG+
Sbjct: 471 AYEGV 475
>gi|170591727|ref|XP_001900621.1| SF2 [Brugia malayi]
gi|158591773|gb|EDP30376.1| SF2, putative [Brugia malayi]
Length = 298
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
+FV LP DV+ R++ ++F + +F +K+T + AF F + + A A+H +G
Sbjct: 9 VFVGNLPSDVKQRDLEDIFYKYGRINFIDIKFT--RDVPFAFIEFDDPRDARDAVHGRDG 66
Query: 98 VKFDPQSGSVLHIELA 113
FD G + +EL
Sbjct: 67 YDFD---GCRIRVELT 79
>gi|307103912|gb|EFN52169.1| hypothetical protein CHLNCDRAFT_139351 [Chlorella variabilis]
Length = 724
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 52 IHNLFRRKPGFDFCQLK---YTGRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVL 108
+ +FR PG ++C LK +GR ++ + ++ ++A AA +LNGV+F P SG L
Sbjct: 326 LSRIFRAFPGMEYCDLKKDRLSGR-SKGYCYVSYAAPESAAAAQAQLNGVEFPPGSGYKL 384
Query: 109 HIELAR-SNSRKKRKPG 124
+ A +R R PG
Sbjct: 385 KVMFAEPLGARPMRCPG 401
>gi|239606561|gb|EEQ83548.1| ribosome biogenesis protein Nop4 [Ajellomyces dermatitidis ER-3]
Length = 744
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Query: 29 QQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQ--LKYTGRGNQVVAFATFVNHQ 86
QQ+ TLFV LP + F + L + ++ F TF +H+
Sbjct: 42 QQKTKSRRTLFVRSLPASATTESLTEYFSQSYPLKHATVVLDPQTKQSKSYGFVTFADHE 101
Query: 87 TAVAALHELNGVKFDPQSGSVLHIELA 113
A AL E NG FD G L IE+A
Sbjct: 102 DAAKALEEFNGSVFD---GKKLKIEVA 125
>gi|149640848|ref|XP_001514376.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 1
[Ornithorhynchus anatinus]
gi|345329106|ref|XP_003431335.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like
[Ornithorhynchus anatinus]
Length = 225
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 95/247 (38%), Gaps = 35/247 (14%)
Query: 37 TLFVSGLPDDVRAREI-HNLFRRKPGF----DFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
T++++ + D ++ E+ +L+ F D LK Q AF F ++ A
Sbjct: 8 TIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQ--AFVIFKELGSSTNA 65
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDS 151
L +L G F G + I+ A+++S +I K T A+ ++
Sbjct: 66 LRQLQGFPF---YGKPMRIQYAKTDSD-----------LISKMRGTFADKEKKKEKKKAK 111
Query: 152 DTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGP 211
++A+ N A GNA ++ P P LF+ NL
Sbjct: 112 TVEQAANAANKKPGQGA------PNAANPQGNA-----AQNPQVPDNPPNYILFLNNLPE 160
Query: 212 NCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGG 271
E L + +PGF +++ G +AF +FE QA A + LQ + S
Sbjct: 161 ETNEMMLSMLFNQFPGFKEVRL-VPGRHDIAFVEFENDGQAGAARDALQGFKITPSH--A 217
Query: 272 MHIEYAR 278
M I YA+
Sbjct: 218 MKITYAK 224
>gi|443720886|gb|ELU10438.1| hypothetical protein CAPTEDRAFT_179768 [Capitella teleta]
Length = 218
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
P LF+ NL TE L + +PGF +++ G +AF +FE QA A + L
Sbjct: 142 PHHILFLTNLPEETTEMMLSMLFNQFPGFREVRL-VPGRHDIAFVEFENEVQAGAAKDAL 200
Query: 260 QDSTLPSSDRGGMHIEYAR 278
Q + ++ M I +A+
Sbjct: 201 QGFKITPTN--AMKISFAK 217
>gi|449540824|gb|EMD31812.1| hypothetical protein CERSUDRAFT_88684 [Ceriporiopsis subvermispora
B]
Length = 292
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 199 QPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM--RARGGMPVAFA--DFEEVEQASI 254
+P S LF+ NL + TED L +T + Y +++ G P FA +F ++E +
Sbjct: 141 EPSSVLFVGNLSWDATEDTLWETFNEYGDIKSVRVPTDRETGKPKGFAYVEFSDIEASKK 200
Query: 255 AMEG 258
A EG
Sbjct: 201 AFEG 204
>gi|50292159|ref|XP_448512.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527824|emb|CAG61473.1| unnamed protein product [Candida glabrata]
Length = 802
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 15/96 (15%)
Query: 170 FVTTQ-SERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGF 228
FV TQ SE A + A P N+ T+F+ LGP E +L++ P
Sbjct: 446 FVNTQVSEAALNDFFATDPTNT------------TVFVGGLGPTVQEQQLRKIFQ--PFG 491
Query: 229 NMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTL 264
N+L ++ G F FE A A++GLQ L
Sbjct: 492 NILSIKIPPGKNCGFVKFEHKIDAEAAIQGLQGFVL 527
>gi|389742376|gb|EIM83563.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 274
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 101/245 (41%), Gaps = 24/245 (9%)
Query: 37 TLFVSGLPDDVRAREIHNLFR---RKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALH 93
TL++ L + +R + N R + G + + + AF +F + + A AL
Sbjct: 50 TLYIQNLNEKIRIEVLKNSLRGLFKSYGEVLDVVAHNNLRMRGQAFVSFESPEIAAKALK 109
Query: 94 ELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDSDT 153
E+ G P + I AR+ S V+ K T + + +T
Sbjct: 110 EVKGF---PLYSKPMQISFARTRSD----------AVVKKLDATNFDQHKEHRLQHKKET 156
Query: 154 DEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNC 213
+P++ + V ++ + AT + P N + P E + P LF+ NL +
Sbjct: 157 RYTNPIKRKFREKR---VASEMDGATSAPAPKRP-NVQMPDEY-LPPNKILFLQNLPESV 211
Query: 214 TEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMH 273
T+ +L+ + YP + +++ +AF ++ + A++A + L + L ++ +
Sbjct: 212 TKPQLEALFTQYPNLHEVRL-IPTKKDIAFVEYVDEGSATVAKDALHNYKLDGENK--IK 268
Query: 274 IEYAR 278
I +AR
Sbjct: 269 ITFAR 273
>gi|371874989|ref|NP_001243119.1| U2 small nuclear ribonucleoprotein B'' [Danio rerio]
Length = 220
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 188 INSEKPYEGGVQ-----PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVA 242
+N++ P VQ P LF+ NL E L + +PGF +++ G ++
Sbjct: 127 VNTQPPPPATVQIPDNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRL-VPGKHDIS 185
Query: 243 FADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYAR 278
F +FE QA +A + LQ + ++ M I YA+
Sbjct: 186 FVEFESEAQAGVAKDALQGFRITAT--CAMKITYAK 219
>gi|325181594|emb|CCA16044.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325191994|emb|CCA26461.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 236
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 155 EASP--VRNIDSADKGDFVTTQSERATDSGN-----AVAPINSEKPYEGG--VQPCSTLF 205
+ASP R+ + A + T+ + SGN + +P +++ E G P + L+
Sbjct: 18 QASPKYARSPNDASQDRHQQTKQDENKSSGNEGERRSTSPSSNQMASEHGDIANPGNNLY 77
Query: 206 IANLGPNCTEDELKQTLSVYPGFNMLKM----RARGGMPVAFADFEEVEQASIAMEGLQD 261
+ANL T++EL+Q + ++ +R AF FE+V AS A++ L
Sbjct: 78 VANLAHRVTDEELRQLFEKFGRLEKCEIIIDPISRESRGFAFVTFEDVRDASDAVQELNG 137
Query: 262 STLPSSDRGGMHIEYARSK 280
+ M +E+A+ K
Sbjct: 138 KDIQGRR---MRVEHAKRK 153
>gi|114682135|ref|XP_514668.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 2
[Pan troglodytes]
gi|397511247|ref|XP_003825989.1| PREDICTED: polyadenylate-binding protein 1-like [Pan paniscus]
Length = 614
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L D + + +++ F C++ G++ F F H+ A
Sbjct: 94 RKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQ 153
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGA 127
A++ +NG+ + + V H + SR++R+ GA
Sbjct: 154 AINTMNGMLLNDRKVFVGHFK-----SRREREAELGA 185
>gi|403263452|ref|XP_003924046.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Saimiri
boliviensis boliviensis]
gi|197692169|dbj|BAG70048.1| small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens]
gi|197692419|dbj|BAG70173.1| small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens]
Length = 225
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 94/247 (38%), Gaps = 35/247 (14%)
Query: 37 TLFVSGLPDDVRAREI-HNLFRRKPGF----DFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
T++++ + D ++ E+ +L+ F D LK Q AFA F ++ A
Sbjct: 8 TIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQ--AFAIFKELGSSTNA 65
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDS 151
L +L G F G + I+ A+++S +I K T A+ ++
Sbjct: 66 LRQLQGFPF---YGKPMRIQYAKTDSD-----------IISKMRGTFADKEKKKEKKKAK 111
Query: 152 DTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGP 211
++ + N A GN+ + P P LF+ NL
Sbjct: 112 TVEQTATTTNKKPGQG------TPNSANTQGNS-----TPNPQVPDYPPNYILFLNNLPE 160
Query: 212 NCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGG 271
E L + +PGF +++ G +AF +FE QA A + LQ + S
Sbjct: 161 ETNEMMLSMLFNQFPGFKEVRL-VPGRHDIAFVEFENDGQAGAARDALQGFKITPSH--A 217
Query: 272 MHIEYAR 278
M I YA+
Sbjct: 218 MKITYAK 224
>gi|90077244|dbj|BAE88302.1| unnamed protein product [Macaca fascicularis]
Length = 197
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 69/180 (38%), Gaps = 23/180 (12%)
Query: 103 QSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSA----DGDSDTDEASP 158
Q G +L I ++RS + G VI K + N S D A
Sbjct: 36 QFGQILDILVSRSLKMR------GQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKT 89
Query: 159 VRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDEL 218
+I + KG FV +R P + E P P LF+ NL E L
Sbjct: 90 DSDIIAKMKGTFVERDRKREKRK-----PKSQETP-----APNHILFLTNLPEETNELML 139
Query: 219 KQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYAR 278
+ +PGF +++ G +AF +F+ QA A + LQ + ++ M I +A+
Sbjct: 140 SMLFNQFPGFKEVRL-VPGRHDIAFVEFDNEVQAGAARDALQGFKITQNN--AMKISFAK 196
>gi|312134529|ref|YP_004001867.1| glycoside hydrolase starch-binding protein [Caldicellulosiruptor
owensensis OL]
gi|311774580|gb|ADQ04067.1| glycoside hydrolase starch-binding protein [Caldicellulosiruptor
owensensis OL]
Length = 1097
Score = 37.7 bits (86), Expect = 6.1, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 65/166 (39%), Gaps = 24/166 (14%)
Query: 97 GVKFDPQSGSVLHIELARSNSRKKRK--------PGSGAYVVIDKRTKTEANVQESSSAD 148
VK Q+ V++IE + K++ P + +V I K ++ VQ S+
Sbjct: 644 AVKSSQQAYPVVNIERQAVETLKEKGVKRIEIKYPDTSVFVDIYKSVASDIQVQAFQSSK 703
Query: 149 GDSDTDEASPVRNIDSADK------GDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCS 202
+ T E+ ++N+D +F + E S N + P E GV PC
Sbjct: 704 EEIKTAESLLLKNVDDYTTVKIIAMKEFKIIRGEELDTSSNTIYVFKFNSPVEDGVVPC- 762
Query: 203 TLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEE 248
I N D + Y + L ++A+G +AFA E+
Sbjct: 763 ---IIN------NDNITPVKDYYTEDSYLVVKAKGSQKIAFAKVEK 799
>gi|5815238|gb|AAD52612.1| splicing factor SR1D [Arabidopsis thaliana]
Length = 261
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 37 TLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGR--GNQVVAFATFVNHQTAVAALHE 94
T++V LP D+R RE+ +LF + LK R G AF F + + A A+H
Sbjct: 8 TVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPG---YAFVEFDDARDAEDAIHG 64
Query: 95 LNGVKFDPQSGSVLHIELARSNSR 118
+G FD G L +ELA R
Sbjct: 65 RDGYDFD---GHRLRVELAHGGRR 85
>gi|193788267|dbj|BAG53161.1| unnamed protein product [Homo sapiens]
Length = 633
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 197 GVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMP-VAFADFEEVEQASIA 255
G QP TLF+ L + TE+ LK++ ++ R G F DF E A A
Sbjct: 490 GSQPSKTLFVKGLSEDTTEETLKESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAA 549
Query: 256 MEGLQDSTLPSSDRGGMHIEYARSK 280
E ++D + D + +++A+ K
Sbjct: 550 KEAMEDGEI---DGNKVTLDWAKPK 571
>gi|119596296|gb|EAW75890.1| hCG2019100, isoform CRA_d [Homo sapiens]
Length = 639
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L D + + +++ F C++ G++ F F H+ A
Sbjct: 94 RKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQ 153
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGA 127
A++ +NG+ + + V H + SR++R+ GA
Sbjct: 154 AINTMNGMLLNDRKVFVGHFK-----SRREREAELGA 185
>gi|72534835|ref|NP_001026846.1| poly A binding protein, cytoplasmic 1 a [Danio rerio]
gi|71534060|gb|AAH99992.1| Poly A binding protein, cytoplasmic 1 a [Danio rerio]
Length = 634
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 100/280 (35%), Gaps = 56/280 (20%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L + + +++ F C++ G++ F F H+ A
Sbjct: 94 RKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAER 153
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGD 150
A+ ++NG+ + + + + R SRK+R+ GA R K NV + +
Sbjct: 154 AIEKMNGMLLNDRK-----VFVGRFKSRKEREAEMGA------RAKEFTNVYIKNFGEDM 202
Query: 151 SDTD------EASPVRNI-----DSADKGDFVTTQSERATDSGNAV-----APINSEKPY 194
D + P +I DS F ER D+ AV +N ++ Y
Sbjct: 203 DDEKLKEIFCKYGPALSIRVMTDDSGKSKGFGFVSFERHEDAQRAVDEMNGKEMNGKQVY 262
Query: 195 EGGVQPCS------------------------TLFIANLGPNCTEDELKQTLSVYPGFNM 230
G Q L++ NL ++ L++ S +
Sbjct: 263 VGRAQKKGERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLRKEFSPFGTITS 322
Query: 231 LKMRARGGMP-----VAFADFEEVEQASIAMEGLQDSTLP 265
K+ GG V F+ EE +A M G +T P
Sbjct: 323 AKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 362
>gi|332208761|ref|XP_003253477.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 590
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L D + + +++ F C++ G++ F F H+ A
Sbjct: 94 RKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQ 153
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGA 127
A++ +NG+ + + V H + SR++R+ GA
Sbjct: 154 AINTMNGMLLNDRKVFVGHFK-----SRREREAELGA 185
>gi|159163525|pdb|1X4A|A Chain A, Solution Structure Of Rrm Domain In Splicing Factor Sf2
Length = 109
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
++V LP D+R ++I ++F + LK RG AF F + + A A++ +G
Sbjct: 25 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLK-NRRGGPPFAFVEFEDPRDAEDAVYGRDG 83
Query: 98 VKFDPQSGSVLHIELARSNSRKKRKPGSG 126
+D G L +E RS P SG
Sbjct: 84 YDYD---GYRLRVEFPRSGRGTGSGPSSG 109
>gi|353241446|emb|CCA73260.1| related to Transformer-2 protein homolog [Piriformospora indica DSM
11827]
Length = 257
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT--GRGNQVVAFATFVNHQTAVAALH 93
N L VSGL + +RE+ +F + + Y R ++ F T + A AA+
Sbjct: 95 NNLHVSGLSSRIDSRELEAIFAKVGKVKKASVMYDPHSRESRGFGFVTMETVEDADAAIS 154
Query: 94 ELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKR 134
+LN + Q G ++++E AR + R P G Y KR
Sbjct: 155 QLNSTE---QQGKIINVERARRG--RARTPTPGRYYGPPKR 190
>gi|119176075|ref|XP_001240165.1| hypothetical protein CIMG_09786 [Coccidioides immitis RS]
gi|303318207|ref|XP_003069103.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108789|gb|EER26958.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320031722|gb|EFW13681.1| hypothetical protein CPSG_09720 [Coccidioides posadasii str.
Silveira]
gi|392864587|gb|EAS27519.2| RNA binding domain-containing protein [Coccidioides immitis RS]
Length = 240
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 34 GINTLFVSGLPDDVRAREIHNLFRRKPG-FDFCQLKYTGRG-NQVVAFATFVNHQTAVAA 91
G + + VSGLP DV I F + G + Y G ++ +A TF TA A
Sbjct: 65 GESKIIVSGLPSDVNEANIKEYFHQSAGPVKKVMVTYNQNGTSRGIASITFARPDTAAKA 124
Query: 92 LHELNGVKFD 101
ELNG+ D
Sbjct: 125 AKELNGLLID 134
>gi|333978173|ref|YP_004516118.1| acetyl-CoA acetyltransferase [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821654|gb|AEG14317.1| acetyl-CoA acetyltransferase [Desulfotomaculum kuznetsovii DSM
6115]
Length = 393
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 180 DSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGM 239
D A+ ++ EK +E G++P +T+ LG + K +V PG ++ K+ A+ G+
Sbjct: 251 DGAGALVLMSREKAHELGIKPLATI----LGHASVSQDAKYIATV-PGLSINKLLAKKGL 305
Query: 240 PVAFADFEEVEQASIAM 256
PV D EV +A A+
Sbjct: 306 PVDAIDLFEVNEAFAAV 322
>gi|156402885|ref|XP_001639820.1| predicted protein [Nematostella vectensis]
gi|156226951|gb|EDO47757.1| predicted protein [Nematostella vectensis]
Length = 209
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
P + LF+ NL TE L + +PGF +++ G ++F +FE QA A + L
Sbjct: 133 PNNILFLTNLPMETTELMLSMLFNQFPGFKEVRL-VPGRSDISFVEFENEVQAGTAKDAL 191
Query: 260 QDSTLPSSDRGGMHIEYAR 278
Q + ++ M I YA+
Sbjct: 192 QGFRITPTN--AMSISYAK 208
>gi|148228289|ref|NP_001088400.1| serine/arginine-rich splicing factor 9 [Xenopus laevis]
gi|54261635|gb|AAH84289.1| LOC495254 protein [Xenopus laevis]
Length = 230
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%)
Query: 33 NGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAAL 92
+G ++V LP D+R +E+ +LF R +LK G + AF ++ + + A A+
Sbjct: 13 SGDGRIYVGNLPSDIREKELEDLFDRYGRIRTVELKNRGGSSAPFAFISYQDPRDAEDAV 72
Query: 93 HELNGVKF 100
NG F
Sbjct: 73 FGRNGYDF 80
>gi|386764191|ref|NP_001245616.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
gi|383293324|gb|AFH07330.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
Length = 638
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 9/105 (8%)
Query: 24 PPYHHQQQDNG------INTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVV 77
PP QQ + + + +SG+P R +I L + C+ + N
Sbjct: 24 PPLDRQQLEGAGTSSVTTSKILISGIPMQTRFEDIEPLLKPYGIVKQCEAISSKDQNTQT 83
Query: 78 AFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRK 122
TF N + A A LNGV+F+ GS LH E N R+ ++
Sbjct: 84 VHITFENPEQAQRAAVGLNGVEFE---GSKLHAEQLDKNQRRSQR 125
>gi|432856226|ref|XP_004068415.1| PREDICTED: ELAV-like protein 4-like [Oryzias latipes]
Length = 439
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 88/204 (43%), Gaps = 14/204 (6%)
Query: 21 VPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTGRGNQVV 77
P P D+ L V+ LP ++ E +LF + C+L K TG+ +
Sbjct: 103 CPSPMQTGPTNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ-SLGY 161
Query: 78 AFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKT 137
F +++ + A A++ LNG++ ++ + + AR +S R + YV +T T
Sbjct: 162 GFVNYIDPKDAEKAINTLNGLRLQTKT---IKVSYARPSSASIRD--ANLYVSGLPKTMT 216
Query: 138 EANVQESSSADGDSDTDEASPVRNIDSADKG-DFVTTQSERATDSGNAVAPINSEKPYEG 196
+ +++ S G T V + +G F+ + ++ ++ A+ +N +KP G
Sbjct: 217 QKELEQLFSQYGRIITSRIL-VDQVTGGSRGVGFI--RFDKRIEAEEAIKGLNGQKP-SG 272
Query: 197 GVQPCSTLFIANLGPNCTEDELKQ 220
+P + F N ++ L Q
Sbjct: 273 AAEPITVKFANNPSQKTSQALLSQ 296
>gi|297664977|ref|XP_002810889.1| PREDICTED: ELAV-like protein 4 isoform 2 [Pongo abelii]
Length = 380
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 14/203 (6%)
Query: 22 PPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTGRGNQVVA 78
P P D+ L V+ LP ++ E +LF + C+L K TG+ +
Sbjct: 32 PSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ-SLGYG 90
Query: 79 FATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTE 138
F +++ + A A++ LNG++ ++ + + AR +S R + YV +T T+
Sbjct: 91 FVNYIDPKDAEKAINTLNGLRLQTKT---IKVSYARPSSASIRD--ANLYVSGLPKTMTQ 145
Query: 139 ANVQESSSADGDSDTDEASPVRNIDSADKG-DFVTTQSERATDSGNAVAPINSEKPYEGG 197
+++ S G T V + +G F+ + ++ ++ A+ +N +KP G
Sbjct: 146 KELEQLFSQYGRIITSRIL-VDQVTGVSRGVGFI--RFDKRIEAEEAIKGLNGQKP-SGA 201
Query: 198 VQPCSTLFIANLGPNCTEDELKQ 220
+P + F N ++ L Q
Sbjct: 202 TEPITVKFANNPSQKSSQALLSQ 224
>gi|148905976|gb|ABR16149.1| unknown [Picea sitchensis]
Length = 892
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 9/117 (7%)
Query: 150 DSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANL 209
DSD+ E+ V+N ++ D+ N I E PY G P TLF+ N+
Sbjct: 147 DSDSQESLNVKNNNAIS--DYTAGGGTGHPGVSNVPVTIVGEHPY--GEHPSRTLFVRNI 202
Query: 210 GPNCTEDELKQTLSVYPGFNML--KMRARGGMPVAFADFEEVEQASIAMEGLQDSTL 264
N + EL+ Y L + RG + +++ D + A AM LQ+ L
Sbjct: 203 NSNVEDSELRTYFEHYGDIRTLYTACKHRGFVMISYYD---IRAARNAMRALQNKPL 256
>gi|37748043|gb|AAH59527.1| Snrpb2 protein [Danio rerio]
Length = 229
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 188 INSEKPYEGGVQ-----PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVA 242
+N++ P VQ P LF+ NL E L + +PGF +++ G ++
Sbjct: 136 VNTQPPPPATVQIPDNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRL-VPGKHDIS 194
Query: 243 FADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEYAR 278
F +FE QA +A + LQ + ++ M I YA+
Sbjct: 195 FVEFESEAQAGVAKDALQGFRITAT--CAMKITYAK 228
>gi|355784710|gb|EHH65561.1| U2 small nuclear ribonucleoprotein B'' [Macaca fascicularis]
Length = 225
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
P LF+ NL E L + +PGF +++ G +AF +FE QA A + L
Sbjct: 149 PNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRL-VPGRHDIAFVEFENDGQAGAARDAL 207
Query: 260 QDSTLPSSDRGGMHIEYAR 278
Q + +S M I YA+
Sbjct: 208 QGFKITTSH--AMKITYAK 224
>gi|261193242|ref|XP_002623027.1| ribosome biogenesis protein Nop4 [Ajellomyces dermatitidis
SLH14081]
gi|239589162|gb|EEQ71805.1| ribosome biogenesis protein Nop4 [Ajellomyces dermatitidis
SLH14081]
gi|327356849|gb|EGE85706.1| ribosome biogenesis protein Nop4 [Ajellomyces dermatitidis ATCC
18188]
Length = 744
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Query: 29 QQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV--VAFATFVNHQ 86
QQ+ TLFV LP + F + + + Q F TF +H+
Sbjct: 42 QQKTKSRRTLFVRSLPASATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADHE 101
Query: 87 TAVAALHELNGVKFDPQSGSVLHIELA 113
A AL E NG FD G L IE+A
Sbjct: 102 DAAKALEEFNGSVFD---GKKLKIEVA 125
>gi|149693657|ref|XP_001492578.1| PREDICTED: ELAV-like protein 4 isoform 4 [Equus caballus]
Length = 380
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 14/203 (6%)
Query: 22 PPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTGRGNQVVA 78
P P D+ L V+ LP ++ E +LF + C+L K TG+ +
Sbjct: 32 PSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ-SLGYG 90
Query: 79 FATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTE 138
F +++ + A A++ LNG++ ++ + + AR +S R + YV +T T+
Sbjct: 91 FVNYIDPKDAEKAINTLNGLRLQTKT---IKVSYARPSSASIRD--ANLYVSGLPKTMTQ 145
Query: 139 ANVQESSSADGDSDTDEASPVRNIDSADKG-DFVTTQSERATDSGNAVAPINSEKPYEGG 197
+++ S G T V + +G F+ + ++ ++ A+ +N +KP G
Sbjct: 146 KELEQLFSQYGRIITSRIL-VDQVTGVSRGVGFI--RFDKRIEAEEAIKGLNGQKP-SGA 201
Query: 198 VQPCSTLFIANLGPNCTEDELKQ 220
+P + F N ++ L Q
Sbjct: 202 TEPITVKFANNPSQKSSQALLSQ 224
>gi|355557990|gb|EHH14770.1| hypothetical protein EGK_00744 [Macaca mulatta]
Length = 385
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 88/204 (43%), Gaps = 14/204 (6%)
Query: 21 VPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTGRGNQVV 77
P P D+ L V+ LP ++ E +LF + C+L K TG+ +
Sbjct: 36 CPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ-SLGY 94
Query: 78 AFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKT 137
F +++ + A A++ LNG++ ++ + + AR +S R + YV +T T
Sbjct: 95 GFVNYIDPKDAEKAINTLNGLRLQTKT---IKVSYARPSSASIRD--ANLYVSGLPKTMT 149
Query: 138 EANVQESSSADGDSDTDEASPVRNIDSADKG-DFVTTQSERATDSGNAVAPINSEKPYEG 196
+ +++ S G T V + +G F+ + ++ ++ A+ +N +KP G
Sbjct: 150 QKELEQLFSQYGRIITSRIL-VDQVTGVSRGVGFI--RFDKRIEAEEAIKGLNGQKP-SG 205
Query: 197 GVQPCSTLFIANLGPNCTEDELKQ 220
+P + F N ++ L Q
Sbjct: 206 ATEPITVKFANNPSQKSSQALLSQ 229
>gi|221316765|ref|NP_068771.2| ELAV-like protein 4 isoform 1 [Homo sapiens]
gi|114556466|ref|XP_001134946.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 2 [Pan troglodytes]
gi|332219811|ref|XP_003259051.1| PREDICTED: ELAV-like protein 4 isoform 6 [Nomascus leucogenys]
gi|395855045|ref|XP_003799982.1| PREDICTED: ELAV-like protein 4 isoform 5 [Otolemur garnettii]
gi|397518912|ref|XP_003829619.1| PREDICTED: ELAV-like protein 4 isoform 6 [Pan paniscus]
gi|402854513|ref|XP_003891912.1| PREDICTED: ELAV-like protein 4 isoform 6 [Papio anubis]
gi|426329583|ref|XP_004025818.1| PREDICTED: ELAV-like protein 4 isoform 6 [Gorilla gorilla gorilla]
gi|223590202|sp|P26378.2|ELAV4_HUMAN RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|380810344|gb|AFE77047.1| ELAV-like protein 4 isoform 1 [Macaca mulatta]
Length = 380
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 14/203 (6%)
Query: 22 PPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTGRGNQVVA 78
P P D+ L V+ LP ++ E +LF + C+L K TG+ +
Sbjct: 32 PSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ-SLGYG 90
Query: 79 FATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTE 138
F +++ + A A++ LNG++ ++ + + AR +S R + YV +T T+
Sbjct: 91 FVNYIDPKDAEKAINTLNGLRLQTKT---IKVSYARPSSASIRD--ANLYVSGLPKTMTQ 145
Query: 139 ANVQESSSADGDSDTDEASPVRNIDSADKG-DFVTTQSERATDSGNAVAPINSEKPYEGG 197
+++ S G T V + +G F+ + ++ ++ A+ +N +KP G
Sbjct: 146 KELEQLFSQYGRIITSRIL-VDQVTGVSRGVGFI--RFDKRIEAEEAIKGLNGQKP-SGA 201
Query: 198 VQPCSTLFIANLGPNCTEDELKQ 220
+P + F N ++ L Q
Sbjct: 202 TEPITVKFANNPSQKSSQALLSQ 224
>gi|321469332|gb|EFX80313.1| hypothetical protein DAPPUDRAFT_243777 [Daphnia pulex]
Length = 171
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 60/141 (42%), Gaps = 19/141 (13%)
Query: 136 KTEANVQESSSADGDSDTDEASPVRNIDSADKGDFVT-----------TQSERATDSGNA 184
+T+A +Q SS DE S V ID AD+ VT T ++ A + N
Sbjct: 10 RTKALMQSSSEDRCLDPADEPSNVTVIDPADEPRNVTVIDPADEPSNVTVTDPADEPSNV 69
Query: 185 VAPINSEKPYEGGVQPCSTLFIANLGPNCTEDELKQTLSVY-PGFNMLKMRARGGMPVAF 243
+++P G V L I N+ N TEDE+K+ Y P F K + VAF
Sbjct: 70 TVTDPADEP--GNVTVTKVLCIRNILVNTTEDEMKKVFGEYGPIFRFKKFQN-----VAF 122
Query: 244 ADFEEVEQASIAMEGLQDSTL 264
FEE A A + L +L
Sbjct: 123 ISFEEKADAKRAKDALNFQSL 143
>gi|11499008|ref|NP_070242.1| surface layer protein B [Archaeoglobus fulgidus DSM 4304]
gi|2649159|gb|AAB89834.1| surface layer protein B (slgB-2) [Archaeoglobus fulgidus DSM 4304]
Length = 2425
Score = 37.4 bits (85), Expect = 7.8, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 75 QVVAFATFVNHQTAVAALHELNGVKFD--------PQSGSVLHIELARSNSRKKRKPGSG 126
+VV F + TAVA + ++NGVK D P+ + + + L R N + +R+P +G
Sbjct: 2002 KVVTFGRGMKKATAVAVI-KINGVKMDVKAEREILPRHSTFVEVSLYRENEKGEREPLAG 2060
Query: 127 AYVVIDKRTKTEANVQESS--SADGDSDTDE 155
+V+ + + + + A G+ TDE
Sbjct: 2061 KSIVVGRNQLLDGRLTPAGVLDASGNPVTDE 2091
>gi|301508553|gb|ADK78238.1| ELAV2 [Schmidtea mediterranea]
Length = 411
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 102/240 (42%), Gaps = 24/240 (10%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRG--NQVVAFATFVNHQTAVAALHEL 95
L++ GLP + E+ NLF + ++ Y + ++ VAF F A A+ +L
Sbjct: 141 LYICGLPKKMTQMELENLFSQCGKIITARILYDNKTGLSRGVAFIRFDQRSEAQLAIKKL 200
Query: 96 NGVKFDPQSGSV-LHIELARSNSRKKRKPGSGAYVVIDKRTKTEANV--QESSSADGDSD 152
N + P++ + + ++ A S S ++ S A + K A + Q + SA+ S
Sbjct: 201 NS--YQPENSTEPIIVKFANSPSTSRQDNISLAIL------KQAAQIPNQNAQSANPQSR 252
Query: 153 TDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCS-TLFIANLGP 211
+ SP++ + S + + T+ + +GN + G + +F+ NL P
Sbjct: 253 SSLISPLQQLASVARLKYPTSMDFMPSLTGNNSLLAPAFAASTGALTATGWCIFVYNLAP 312
Query: 212 NCTEDELKQTLSVYPGFNMLKM-------RARGGMPVAFADFEEVEQASIAMEGLQDSTL 264
+ L Q + +K+ + +G V +++EE A +A++ L TL
Sbjct: 313 ETDDATLWQLFGPFGAVQTVKIIRDTATNKCKGFGFVTMSNYEE---ALLAIQSLNGFTL 369
>gi|84662764|ref|NP_001033787.1| ELAV-like protein 4 isoform b [Mus musculus]
gi|291398924|ref|XP_002715150.1| PREDICTED: ELAV-like 4-like isoform 1 [Oryctolagus cuniculus]
gi|426215488|ref|XP_004002004.1| PREDICTED: ELAV-like protein 4 isoform 4 [Ovis aries]
gi|26347767|dbj|BAC37532.1| unnamed protein product [Mus musculus]
gi|112180554|gb|AAH52451.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Mus musculus]
Length = 380
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 14/203 (6%)
Query: 22 PPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTGRGNQVVA 78
P P D+ L V+ LP ++ E +LF + C+L K TG+ +
Sbjct: 32 PSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ-SLGYG 90
Query: 79 FATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTE 138
F +++ + A A++ LNG++ ++ + + AR +S R + YV +T T+
Sbjct: 91 FVNYIDPKDAEKAINTLNGLRLQTKT---IKVSYARPSSASIRD--ANLYVSGLPKTMTQ 145
Query: 139 ANVQESSSADGDSDTDEASPVRNIDSADKG-DFVTTQSERATDSGNAVAPINSEKPYEGG 197
+++ S G T V + +G F+ + ++ ++ A+ +N +KP G
Sbjct: 146 KELEQLFSQYGRIITSRIL-VDQVTGVSRGVGFI--RFDKRIEAEEAIKGLNGQKP-SGA 201
Query: 198 VQPCSTLFIANLGPNCTEDELKQ 220
+P + F N ++ L Q
Sbjct: 202 TEPITVKFANNPSQKSSQALLSQ 224
>gi|198432543|ref|XP_002131859.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1
[Ciona intestinalis]
Length = 235
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
++V LP DVR +++ +LF + LK R AF F + + A ++H NG
Sbjct: 11 VYVGNLPPDVREKDVEDLFYKYGSIRHVNLK--NRRGPPFAFVEFEDRRDAEDSVHGRNG 68
Query: 98 VKFDPQSGSVLHIELARSNSRKKR 121
FD G L +E R N +R
Sbjct: 69 YNFD---GYKLRVEHPRGNGPSQR 89
>gi|395858003|ref|XP_003801365.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Otolemur
garnettii]
Length = 225
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 96/247 (38%), Gaps = 35/247 (14%)
Query: 37 TLFVSGLPDDVRAREI-HNLFRRKPGF----DFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
T++++ + D ++ E+ +L+ F D LK Q AF F ++ A
Sbjct: 8 TIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQ--AFVIFKELGSSTNA 65
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDS 151
L +L G F G + I+ A+++S +I K T A+ ++
Sbjct: 66 LRQLQGFPF---YGKPMRIQYAKTDSD-----------IISKMRGTFADKEKKKEKKKAK 111
Query: 152 DTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGP 211
++A+ N G + A GN+ + P P LF+ NL
Sbjct: 112 TVEQAATTAN---KKPGQGI---PNSANTQGNS-----TPNPQVPDYPPNYILFLNNLPE 160
Query: 212 NCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGG 271
E L + +PGF +++ G +AF +FE QA A + LQ + S
Sbjct: 161 ETNEMMLSMLFNQFPGFKEVRL-VPGRHDIAFVEFENDGQAGAARDALQGFKITPSH--A 217
Query: 272 MHIEYAR 278
M I YA+
Sbjct: 218 MKITYAK 224
>gi|390465926|ref|XP_003733492.1| PREDICTED: ELAV-like protein 4 isoform 5 [Callithrix jacchus]
gi|403258123|ref|XP_003921628.1| PREDICTED: ELAV-like protein 4 isoform 4 [Saimiri boliviensis
boliviensis]
Length = 380
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 14/203 (6%)
Query: 22 PPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTGRGNQVVA 78
P P D+ L V+ LP ++ E +LF + C+L K TG+ +
Sbjct: 32 PSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ-SLGYG 90
Query: 79 FATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTE 138
F +++ + A A++ LNG++ ++ + + AR +S R + YV +T T+
Sbjct: 91 FVNYIDPKDAEKAINTLNGLRLQTKT---IKVSYARPSSASIRD--ANLYVSGLPKTMTQ 145
Query: 139 ANVQESSSADGDSDTDEASPVRNIDSADKG-DFVTTQSERATDSGNAVAPINSEKPYEGG 197
+++ S G T V + +G F+ + ++ ++ A+ +N +KP G
Sbjct: 146 KELEQLFSQYGRIITSRIL-VDQVTGVSRGVGFI--RFDKRIEAEEAIKGLNGQKP-SGA 201
Query: 198 VQPCSTLFIANLGPNCTEDELKQ 220
+P + F N ++ L Q
Sbjct: 202 TEPITVKFANNPSQKSSQALLSQ 224
>gi|417397429|gb|JAA45748.1| Putative spliceosomal protein snrnp-u1a/u2b [Desmodus rotundus]
Length = 225
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 93/247 (37%), Gaps = 35/247 (14%)
Query: 37 TLFVSGLPDDVRAREI-HNLFRRKPGF----DFCQLKYTGRGNQVVAFATFVNHQTAVAA 91
T++++ + D ++ E+ +L+ F D LK Q AF F ++ A
Sbjct: 8 TIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQ--AFVIFKELGSSTNA 65
Query: 92 LHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGDS 151
L +L G F G + I+ A+++S +I K T A+ ++
Sbjct: 66 LRQLQGFPF---YGKPMRIQYAKTDSD-----------IISKMRGTFADKEKKKEKKKAK 111
Query: 152 DTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGP 211
++ + N A GNA + P P LF+ NL
Sbjct: 112 TVEQTAITANKKPGQGA------PNSANTQGNA-----TPNPQVPDYPPNYILFLNNLPE 160
Query: 212 NCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGG 271
E L + +PGF +++ G +AF +FE QA A + LQ + S
Sbjct: 161 ETNEMMLSMLFNQFPGFKEVRL-VPGRHDIAFVEFENDGQAGAARDALQGFKITPSH--A 217
Query: 272 MHIEYAR 278
M I YA+
Sbjct: 218 MKITYAK 224
>gi|395530250|ref|XP_003767210.1| PREDICTED: ELAV-like protein 4 [Sarcophilus harrisii]
Length = 707
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 18/215 (8%)
Query: 21 VPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTGRGNQVV 77
P P D+ L V+ LP ++ E +LF + C+L K TG+ +
Sbjct: 372 CPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ-SLGY 430
Query: 78 AFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKT 137
F +++ + A A++ LNG++ ++ + + AR +S R + YV +T T
Sbjct: 431 GFVNYIDPKDAEKAINTLNGLRLQTKT---IKVSYARPSSASIRD--ANLYVSGLPKTMT 485
Query: 138 EANVQESSSADGDSDTDEASPVRNIDSADKG-DFVTTQSERATDSGNAVAPINSEKPYEG 196
+ +++ S G T V + +G F+ + ++ ++ A+ +N +KP G
Sbjct: 486 QKELEQLFSQYGRIITSRIL-VDQVTGVSRGVGFI--RFDKRIEAEEAIKGLNGQKP-SG 541
Query: 197 GVQPCSTLFIANLGPNCTEDELKQTLSV----YPG 227
+P + F N ++ L Q YPG
Sbjct: 542 ATEPITVKFANNPSQKTSQALLSQLYQSPNRRYPG 576
>gi|355784464|gb|EHH65315.1| Polyadenylate-binding protein 1-like protein [Macaca fascicularis]
Length = 635
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 31 QDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+ +G+ +F+ L D + + +++ F C++ G++ F F H+ A
Sbjct: 106 RKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEAAQQ 165
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGA 127
A++ +NG+ + + V H + SR++R+ GA
Sbjct: 166 AINTMNGMLLNDRKVFVGHFK-----SRREREAELGA 197
>gi|71028610|ref|XP_763948.1| splicing factor [Theileria parva strain Muguga]
gi|68350902|gb|EAN31665.1| splicing factor, putative [Theileria parva]
Length = 257
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 33 NGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAAL 92
+ ++ +++ LP+D RE+ F + +C+LK + G+ AF F + + A A+
Sbjct: 4 DDLSRIYIGNLPEDCSQRELEEEFEKFGRIIYCELKKSYSGSP-FAFIEFSDSRDARDAI 62
Query: 93 HELNGVKFDPQSGSVLHIEL 112
+ +G +F G L +EL
Sbjct: 63 RDKDGYEF---HGKKLRVEL 79
>gi|301115920|ref|XP_002905689.1| U1 small nuclear ribonucleoprotein A [Phytophthora infestans T30-4]
gi|262110478|gb|EEY68530.1| U1 small nuclear ribonucleoprotein A [Phytophthora infestans T30-4]
Length = 233
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
P LF+ L +C ++ L Y GF ++M G +AF +F + QA+IA++GL
Sbjct: 157 PNKILFLEELPESCNKEMLGVLFKQYQGFKEVRM-VPGKKGLAFVEFGDEAQAAIALQGL 215
>gi|281347138|gb|EFB22722.1| hypothetical protein PANDA_010481 [Ailuropoda melanoleuca]
Length = 377
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 88/204 (43%), Gaps = 14/204 (6%)
Query: 21 VPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTGRGNQVV 77
P P D+ L V+ LP ++ E +LF + C+L K TG+ +
Sbjct: 28 CPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ-SLGY 86
Query: 78 AFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKT 137
F +++ + A A++ LNG++ ++ + + AR +S R + YV +T T
Sbjct: 87 GFVNYIDPKDAEKAINTLNGLRLQTKT---IKVSYARPSSASIRD--ANLYVSGLPKTMT 141
Query: 138 EANVQESSSADGDSDTDEASPVRNIDSADKG-DFVTTQSERATDSGNAVAPINSEKPYEG 196
+ +++ S G T V + +G F+ + ++ ++ A+ +N +KP G
Sbjct: 142 QKELEQLFSQYGRIITSRIL-VDQVTGVSRGVGFI--RFDKRIEAEEAIKGLNGQKP-SG 197
Query: 197 GVQPCSTLFIANLGPNCTEDELKQ 220
+P + F N ++ L Q
Sbjct: 198 ATEPITVKFANNPSQKSSQALLSQ 221
>gi|240848767|ref|NP_001155687.1| serine/arginine-rich splicing factor 1-like [Acyrthosiphon pisum]
gi|239789607|dbj|BAH71418.1| ACYPI006929 [Acyrthosiphon pisum]
Length = 244
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQV---VAFATFVNHQTAVAALHE 94
++V LP D+R ++I +LF + F ++ + NQ AF F + + A A+H
Sbjct: 8 IYVGNLPPDIRTKDIQDLF-----YKFGKVLFVDLKNQRGPPFAFVEFDDPRDAEDAVHA 62
Query: 95 LNGVKFDPQSGSVLHIELARSN 116
+G +D G L +E R N
Sbjct: 63 RDGYDYD---GYRLRVEFPRGN 81
>gi|291234607|ref|XP_002737237.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Saccoglossus
kowalevskii]
Length = 249
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Query: 11 LPPIHPPPPPVPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYT 70
LP + PPP+ Q+ N LF++ LP++ + LF + F +L
Sbjct: 150 LPSLMSQPPPMQQAAPQSVQEQPPNNILFLTNLPEETNEMMLQMLFNQFQAFKEVRL-VP 208
Query: 71 GRGNQVVAFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELAR 114
GR + +AF F N A A L G K P + + I A+
Sbjct: 209 GRHD--IAFVEFENETQAGVAKDALQGFKITP--SNAMKISFAK 248
>gi|350646485|emb|CCD58884.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 207
Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 36 NTLFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHEL 95
+ ++V LP D + R+I NLF + LK R AF F + A A+
Sbjct: 6 HKIYVGNLPPDTKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDAVRGR 65
Query: 96 NGVKFDPQSGSVLHIELARS 115
+G FD G L +EL R+
Sbjct: 66 DGYNFD---GYALRVELPRT 82
>gi|351713507|gb|EHB16426.1| ELAV-like protein 4 [Heterocephalus glaber]
Length = 385
Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 88/204 (43%), Gaps = 14/204 (6%)
Query: 21 VPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTGRGNQVV 77
P P D+ L V+ LP ++ E +LF + C+L K TG+ +
Sbjct: 36 CPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ-SLGY 94
Query: 78 AFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKT 137
F +++ + A A++ LNG++ ++ + + AR +S R + YV +T T
Sbjct: 95 GFVNYIDPKDAEKAINTLNGLRLQTKT---IKVSYARPSSASIRD--ANLYVSGLPKTMT 149
Query: 138 EANVQESSSADGDSDTDEASPVRNIDSADKG-DFVTTQSERATDSGNAVAPINSEKPYEG 196
+ +++ S G T V + +G F+ + ++ ++ A+ +N +KP G
Sbjct: 150 QKELEQLFSQYGRIITSRIL-VDQVTGVSRGVGFI--RFDKRIEAEEAIKGLNGQKP-SG 205
Query: 197 GVQPCSTLFIANLGPNCTEDELKQ 220
+P + F N ++ L Q
Sbjct: 206 ATEPITVKFANNPSQKSSQALLSQ 229
>gi|449495575|ref|XP_004176204.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Taeniopygia
guttata]
Length = 225
Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGL 259
P LF+ NL E L + +PGF +++ G +AF +FE QA A + L
Sbjct: 149 PNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRL-VPGRHDIAFVEFENENQAGAARDAL 207
Query: 260 QDSTLPSSDRGGMHIEYAR 278
Q + S M I YA+
Sbjct: 208 QGFKITPSH--AMKITYAK 224
>gi|28879001|gb|AAH48159.1| Elavl4 protein [Mus musculus]
Length = 412
Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 22 PPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTGRGNQVVA 78
P P D+ L V+ LP ++ E +LF + C+L K TG+ +
Sbjct: 37 PSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ-SLGYG 95
Query: 79 FATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTE 138
F +++ + A A++ LNG++ ++ + + AR +S R + YV +T T+
Sbjct: 96 FVNYIDPKDAEKAINTLNGLRLQTKT---IKVSYARPSSASIRD--ANLYVSGLPKTMTQ 150
Query: 139 ANVQESSSADGDSDTDEASPVRNIDSADKG-DFVTTQSERATDSGNAVAPINSEKPYEGG 197
+++ S G T V + +G F+ + ++ ++ A+ +N +KP G
Sbjct: 151 KELEQLFSQYGRIITSRI-LVDQVTGVSRGVGFI--RFDKRIEAEEAIKGLNGQKP-SGA 206
Query: 198 VQPCSTLFIANLGPNCTEDELKQTLSV----YPG 227
+P + F N ++ L Q YPG
Sbjct: 207 TEPITVKFANNPSQKSSQALLSQLYQSPNRRYPG 240
>gi|84662766|ref|NP_034618.2| ELAV-like protein 4 isoform a [Mus musculus]
gi|354468156|ref|XP_003496533.1| PREDICTED: ELAV-like protein 4 isoform 3 [Cricetulus griseus]
gi|2500580|sp|Q61701.1|ELAV4_MOUSE RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|603495|dbj|BAA06723.1| HuD [Mus musculus]
gi|440906869|gb|ELR57085.1| ELAV-like protein 4 [Bos grunniens mutus]
Length = 385
Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 88/204 (43%), Gaps = 14/204 (6%)
Query: 21 VPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTGRGNQVV 77
P P D+ L V+ LP ++ E +LF + C+L K TG+ +
Sbjct: 36 CPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ-SLGY 94
Query: 78 AFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKT 137
F +++ + A A++ LNG++ ++ + + AR +S R + YV +T T
Sbjct: 95 GFVNYIDPKDAEKAINTLNGLRLQTKT---IKVSYARPSSASIRD--ANLYVSGLPKTMT 149
Query: 138 EANVQESSSADGDSDTDEASPVRNIDSADKG-DFVTTQSERATDSGNAVAPINSEKPYEG 196
+ +++ S G T V + +G F+ + ++ ++ A+ +N +KP G
Sbjct: 150 QKELEQLFSQYGRIITSRIL-VDQVTGVSRGVGFI--RFDKRIEAEEAIKGLNGQKP-SG 205
Query: 197 GVQPCSTLFIANLGPNCTEDELKQ 220
+P + F N ++ L Q
Sbjct: 206 ATEPITVKFANNPSQKSSQALLSQ 229
>gi|179537|gb|AAA58396.1| brain protein [Homo sapiens]
gi|14280329|gb|AAK57541.1| HUDPRO1 [Homo sapiens]
gi|119627247|gb|EAX06842.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_b [Homo sapiens]
Length = 380
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 14/203 (6%)
Query: 22 PPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTGRGNQVVA 78
P P D+ L V+ LP ++ E +LF + C+L K TG+ +
Sbjct: 32 PSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ-SLGYG 90
Query: 79 FATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTE 138
F +++ + A A++ LNG++ ++ + + AR +S R + YV +T T+
Sbjct: 91 FVNYIDPKDAEKAINTLNGLRLQTKT---IKVSYARPSSASIRD--ANLYVSGLPKTMTQ 145
Query: 139 ANVQESSSADGDSDTDEASPVRNIDSADKG-DFVTTQSERATDSGNAVAPINSEKPYEGG 197
+++ S G T V + +G F+ + ++ ++ A+ +N +KP G
Sbjct: 146 KELEQLFSQYGRIITSRIL-VDQVTGVSRGVGFI--RFDKRIEAEEAIKGLNGQKP-SGA 201
Query: 198 VQPCSTLFIANLGPNCTEDELKQ 220
+P + F N ++ L Q
Sbjct: 202 TEPITVKFANNPSQKSSQALLSQ 224
>gi|389743141|gb|EIM84326.1| hypothetical protein STEHIDRAFT_170049 [Stereum hirsutum FP-91666
SS1]
Length = 779
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 14/118 (11%)
Query: 156 ASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLGPNCTE 215
A P + AD VT + + AT S ++ E G STLF+ NL + T
Sbjct: 512 AEPAQGTKVADGVKPVTVEDD-ATGSAIRISADEEEPSMAAG----STLFVKNLAFSTTA 566
Query: 216 DELKQTLSVYPGFNMLKMR---------ARGGMPVAFADFEEVEQASIAMEGLQDSTL 264
+ L Q P F +++ AR M F F+ E A A++G+Q L
Sbjct: 567 ERLNQVFKHLPSFAFARIQTKPDPKRPNARLSMGYGFVGFKTTEGAKKALKGMQGYVL 624
>gi|320581163|gb|EFW95384.1| poly(A) binding protein [Ogataea parapolymorpha DL-1]
Length = 716
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 202 STLFIANLGPNCTEDELKQTLSVYPGFNMLKM----RARGGMPVAFADFEEVEQASIAME 257
++LF+ +L + +E +LK + YPG +K+ + + + ++ +QA+ AME
Sbjct: 180 TSLFVGDLDKSLSELDLKNVFNKYPGLLSVKIPADCQTGNSLGYGYVNYSNEDQANFAME 239
Query: 258 GLQDSTLPSSD 268
L +T+ SS+
Sbjct: 240 SLNYTTIGSSE 250
>gi|399215899|emb|CCF72587.1| unnamed protein product [Babesia microti strain RI]
Length = 291
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 89/242 (36%), Gaps = 45/242 (18%)
Query: 71 GRGNQVVAFATFVNHQTAV-------AALHELNGVKFDPQSGSVLHIELARSNSRKKRKP 123
G Q+VA +F A +A LN ++ G + I A + S K
Sbjct: 60 GTIRQIVAMGSFWRRGQAWIVFDSIDSATKALNAMQGHIYQGHAMQINFALAKSDIVAKE 119
Query: 124 GSGAYV-----------VIDKRTKTEANVQESSSADGDSDTDEASPVRNIDSADKGDFVT 172
G +V V ++ K Q+ + +S+ + + D G +
Sbjct: 120 -QGTFVERPPGPKKPRAVKEREAKQFELFQQMQKSFMESNLNSETSSATYQGIDNGLLMA 178
Query: 173 TQSERATDSGNAVAPINSEKPYEGGVQ----------------PCSTLFIANLGPNCTED 216
+ RAT++ IN K G + P LF+ NL P+
Sbjct: 179 SAQARATETA-----INMSKLEMGDMSQYQPRTIQFQQHGPGVPHRILFVENLPPDVNPA 233
Query: 217 ELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRGGMHIEY 276
+ PGF ++ R VAF DF+ + A +A++ LQ ++ ++ ++I Y
Sbjct: 234 IVSTLFGQRPGF--IESRVIASRCVAFVDFDSEQSAGLALKALQGHSILGNN---IYISY 288
Query: 277 AR 278
A+
Sbjct: 289 AK 290
>gi|410917616|ref|XP_003972282.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
B''-like [Takifugu rubripes]
Length = 246
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 96/248 (38%), Gaps = 41/248 (16%)
Query: 36 NTLFVSGLPDDVRAREI-HNLFRRKPGF----DFCQLKYTGRGNQVVAFATFVNHQTAVA 90
+T++++ + D V+ E+ +L+ F D +K Q AF F A
Sbjct: 34 HTIYINNINDKVKKEELKRSLYALLSQFGQIVDIVAMKTMKMRGQ--AFVIFKELTAATN 91
Query: 91 ALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTEANVQESSSADGD 150
AL +L G F + I+ A+++S VI K T + ++
Sbjct: 92 ALRQLQGFPF---YNKPMRIQYAKTDSE-----------VIAKMKGTYGDKEKKKKEKKK 137
Query: 151 SDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEGGVQPCSTLFIANLG 210
A + K V ++S R+ +G P N P LF+ NL
Sbjct: 138 PQELPA------NQTKKAAAVVSESHRSPPTGQV--PDNP---------PNYILFLTNLP 180
Query: 211 PNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAMEGLQDSTLPSSDRG 270
E L + +PGF +++ G ++F +FE QA +A + LQ + ++
Sbjct: 181 EETNEMMLSMLFNQFPGFKEVRL-VPGKHDISFVEFESDVQAGVAKDALQGFRITAT--C 237
Query: 271 GMHIEYAR 278
M I YA+
Sbjct: 238 AMKITYAK 245
>gi|348504313|ref|XP_003439706.1| PREDICTED: ELAV-like protein 4-like [Oreochromis niloticus]
Length = 476
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 88/204 (43%), Gaps = 14/204 (6%)
Query: 21 VPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTGRGNQVV 77
P P D+ L V+ LP ++ E +LF + C+L K TG+ +
Sbjct: 141 CPSPMQTGPTNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ-SLGY 199
Query: 78 AFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKT 137
F +++ + A A++ LNG++ ++ + + AR +S R + YV +T T
Sbjct: 200 GFVNYIDPKDAEKAINTLNGLRLQTKT---IKVSYARPSSASIRD--ANLYVSGLPKTMT 254
Query: 138 EANVQESSSADGDSDTDEASPVRNIDSADKG-DFVTTQSERATDSGNAVAPINSEKPYEG 196
+ +++ S G T V + +G F+ + ++ ++ A+ +N +KP G
Sbjct: 255 QKELEQLFSQYGRIITSRI-LVDQVTGGSRGVGFI--RFDKRIEAEEAIKGLNGQKP-SG 310
Query: 197 GVQPCSTLFIANLGPNCTEDELKQ 220
+P + F N ++ L Q
Sbjct: 311 AAEPITVKFANNPSQKTSQALLSQ 334
>gi|117647212|ref|NP_001071119.1| ELAV-like protein 4 [Rattus norvegicus]
gi|2500581|sp|O09032.1|ELAV4_RAT RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|1911579|gb|AAB50733.1| HuD [Rattus sp.]
gi|165970854|gb|AAI58559.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Rattus norvegicus]
Length = 373
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 18/215 (8%)
Query: 21 VPPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTGRGNQVV 77
P P D+ L V+ LP ++ E +LF + C+L K TG+ +
Sbjct: 24 CPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ-SLGY 82
Query: 78 AFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKT 137
F +++ + A A++ LNG++ ++ + + AR +S R + YV +T T
Sbjct: 83 GFVNYIDPKDAEKAINTLNGLRLQTKT---IKVSYARPSSASIRD--ANLYVSGLPKTMT 137
Query: 138 EANVQESSSADGDSDTDEASPVRNIDSADKG-DFVTTQSERATDSGNAVAPINSEKPYEG 196
+ +++ S G T V + +G F+ + ++ ++ A+ +N +KP G
Sbjct: 138 QKELEQLFSQYGRIITSRIL-VDQVTGVSRGVGFI--RFDKRIEAEEAIKGLNGQKP-SG 193
Query: 197 GVQPCSTLFIANLGPNCTEDELKQTLSV----YPG 227
+P + F N ++ L Q YPG
Sbjct: 194 ATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPG 228
>gi|395529330|ref|XP_003766769.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Sarcophilus
harrisii]
Length = 241
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 83/202 (41%), Gaps = 17/202 (8%)
Query: 78 AFATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVID-KRTK 136
AF F +A AL + G F + + I+ A+S+S K G YV D KR K
Sbjct: 55 AFVIFKEISSATNALRSMQGFPFYDKP---MRIQYAKSDSDIIAK-MKGTYVERDRKREK 110
Query: 137 TEANVQESSSADGDSDTDEASPVRNIDSADKGDFVTTQSERATDSGNAVAPINSEKPYEG 196
+ QE+ + A+PV G TQ+ R + + SE P
Sbjct: 111 RKPKGQETPAVKKAVPGGAAAPVVAAVQPVPGMPPMTQAPRIM---HHLPGXLSENP--- 164
Query: 197 GVQPCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKMRARGGMPVAFADFEEVEQASIAM 256
P LF+ NL E L + +PGF +++ G +AF +F+ QA A
Sbjct: 165 ---PNHILFLTNLPEETNELMLSMLFNQFPGFKEVRL-VPGRHDIAFVEFDNEVQAGAAR 220
Query: 257 EGLQDSTLPSSDRGGMHIEYAR 278
+ LQ + ++ M I +A+
Sbjct: 221 DALQGFKITQNN--AMKISFAK 240
>gi|387219571|gb|AFJ69494.1| splicing factor, arginine/serine-rich 1/9 [Nannochloropsis gaditana
CCMP526]
Length = 277
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 38 LFVSGLPDDVRAREIHNLFRRKPGFDFCQLKYTGRGNQVVAFATFVNHQTAVAALHELNG 97
++V LP DVR R++ +LF + +K R AF F + + A A+H +
Sbjct: 5 IYVGNLPMDVRERDLDDLFYKYGRIRGIDIKRPSR-PPAYAFVAFEDPRDAKDAVHYRDN 63
Query: 98 VKFDPQSGSVLHIELARSNSRKKRKPGSGA 127
FD G + +ELA R++ G G
Sbjct: 64 YDFD---GGRIRVELANETPRRRDDRGFGG 90
>gi|73977005|ref|XP_860272.1| PREDICTED: ELAV-like protein 4 isoform 15 [Canis lupus familiaris]
Length = 380
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 14/203 (6%)
Query: 22 PPPPYHHQQQDNGINTLFVSGLPDDVRAREIHNLFRRKPGFDFCQL---KYTGRGNQVVA 78
P P D+ L V+ LP ++ E +LF + C+L K TG+ +
Sbjct: 32 PSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ-SLGYG 90
Query: 79 FATFVNHQTAVAALHELNGVKFDPQSGSVLHIELARSNSRKKRKPGSGAYVVIDKRTKTE 138
F +++ + A A++ LNG++ ++ + + AR +S R + YV +T T+
Sbjct: 91 FVNYIDPKDAEKAINTLNGLRLQTKT---IKVSYARPSSASIRD--ANLYVSGLPKTMTQ 145
Query: 139 ANVQESSSADGDSDTDEASPVRNIDSADKG-DFVTTQSERATDSGNAVAPINSEKPYEGG 197
+++ S G T V + +G F+ + ++ ++ A+ +N +KP G
Sbjct: 146 KELEQLFSQYGRIITSRIL-VDQVTGVSRGVGFI--RFDKRIEAEEAIKGLNGQKP-SGA 201
Query: 198 VQPCSTLFIANLGPNCTEDELKQ 220
+P + F N ++ L Q
Sbjct: 202 TEPITVKFANNPSQKSSQALLSQ 224
>gi|123502490|ref|XP_001328309.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121911250|gb|EAY16086.1| hypothetical protein TVAG_278520 [Trichomonas vaginalis G3]
Length = 195
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 32 DNGINTLFVSGLPDDVRAREIHNLFRRKPGF--DFCQLKYTGRGNQVVAFATFVNHQTAV 89
D N +F+ LP + + + LF F D +K + N+ AF TF +H+ A
Sbjct: 2 DPNCNEVFIDDLPTCIDVQFLKELFEDYGHFPTDSIFVKKQTKPNKAYAFVTFKSHELAK 61
Query: 90 AALHELNGVKFD-----PQSGSVLHIELARSNS 117
A+ ELN K D G + LARS++
Sbjct: 62 RAIEELNYTKLDGVPIRMYWGDPYTMSLARSDA 94
>gi|294461275|gb|ADE76200.1| unknown [Picea sitchensis]
gi|294464400|gb|ADE77712.1| unknown [Picea sitchensis]
Length = 241
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 200 PCSTLFIANLGPNCTEDELKQTLSVYPGFNMLKM-RARGGMPVAFADFEEVEQASIAMEG 258
P + LF+ NL T L+ Y GF ++M A+ G +AF ++ + Q+++AM+
Sbjct: 165 PNNILFVQNLPHETTSMMLQMLFCQYHGFKEVRMIEAKPG--IAFVEYADEMQSTVAMQA 222
Query: 259 LQDSTLPSSDRGGMHIEYAR 278
LQ + + + M I YA+
Sbjct: 223 LQGFKI--TPQNPMLITYAK 240
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.133 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,969,927,308
Number of Sequences: 23463169
Number of extensions: 221980356
Number of successful extensions: 1650387
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 1456
Number of HSP's that attempted gapping in prelim test: 1626166
Number of HSP's gapped (non-prelim): 20238
length of query: 284
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 143
effective length of database: 9,050,888,538
effective search space: 1294277060934
effective search space used: 1294277060934
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 76 (33.9 bits)