Query 023321
Match_columns 284
No_of_seqs 152 out of 1794
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 04:51:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023321.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023321hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i68_A Protein EMRE; transmemb 99.2 2.6E-11 8.8E-16 92.6 9.0 71 187-257 34-105 (137)
2 3b5d_A Multidrug transporter E 98.9 2.2E-08 7.5E-13 73.6 12.0 70 187-256 34-104 (110)
3 3b5d_A Multidrug transporter E 98.6 2.6E-07 8.8E-12 67.8 8.4 69 66-140 34-103 (110)
4 2i68_A Protein EMRE; transmemb 98.5 1.4E-07 4.7E-12 71.9 6.6 70 65-140 33-103 (137)
5 3l1l_A Arginine/agmatine antip 52.4 39 0.0013 29.5 7.5 44 217-260 388-431 (445)
6 3rko_J NADH-quinone oxidoreduc 36.3 38 0.0013 26.4 4.1 35 224-258 127-163 (184)
7 2zxe_G FXYD10, phospholemman-l 32.4 31 0.0011 22.4 2.4 18 240-257 25-42 (74)
8 3o7q_A L-fucose-proton symport 20.7 3.8E+02 0.013 22.5 15.9 32 86-117 58-91 (438)
9 4aps_A DI-OR tripeptide H+ sym 16.1 5.2E+02 0.018 22.2 18.2 190 49-276 3-216 (491)
10 3b9w_A Ammonium transporter fa 13.8 6.4E+02 0.022 22.1 16.0 202 35-277 151-373 (407)
No 1
>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}
Probab=99.25 E-value=2.6e-11 Score=92.57 Aligned_cols=71 Identities=15% Similarity=0.203 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCccchhhh-hchHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHhhccc
Q 023321 187 FQAIVGTVIRSSIIAWCLQKKGPVFVALF-KPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQ 257 (284)
Q Consensus 187 ~~~~~~~~l~~~~~~~~l~~~~~~~~~~~-~~l~pv~a~i~~~~~~gE~~~~~~~~G~~li~~g~~l~~~~~ 257 (284)
...+++++++|++|.+++|+++++.+..+ ..+.|+++++++++++||+++..+++|+++|+.|+++....+
T Consensus 34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~ 105 (137)
T 2i68_A 34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS 105 (137)
T ss_dssp CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 45578899999999999999999999999 899999999999999999999999999999999999997644
No 2
>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*
Probab=98.91 E-value=2.2e-08 Score=73.61 Aligned_cols=70 Identities=16% Similarity=0.205 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCccchhhh-hchHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHhhcc
Q 023321 187 FQAIVGTVIRSSIIAWCLQKKGPVFVALF-KPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWA 256 (284)
Q Consensus 187 ~~~~~~~~l~~~~~~~~l~~~~~~~~~~~-~~l~pv~a~i~~~~~~gE~~~~~~~~G~~li~~g~~l~~~~ 256 (284)
...++...++|.++.+++|+.+.+.+..+ ..+.|+++.+.+++++||+++..+++|..+++.|+++....
T Consensus 34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~ 104 (110)
T 3b5d_A 34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 44577788999999999999999999998 89999999999999999999999999999999999998754
No 3
>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*
Probab=98.56 E-value=2.6e-07 Score=67.82 Aligned_cols=69 Identities=19% Similarity=0.273 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHHHHhccccHhHHHHH-hhhhHHHHHHHHHHHhhhcccccccccchhhHHHHHHhhhhhhhhc
Q 023321 66 MLGVLGICLVQIFAITGIKYSSPTLASAM-GNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSL 140 (284)
Q Consensus 66 ~~g~~~~~~~~~~~~~al~~~~~~~a~il-~~~~Pi~~~lla~~~~~E~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 140 (284)
+.+.+++..++.++..++++.|.+.+..+ ..+.|+++++++++++||+++.. +++|+.+.++|+.++..
T Consensus 34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~------~~~Gi~lIi~Gv~~l~~ 103 (110)
T 3b5d_A 34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence 56777789999999999999999999988 79999999999999999999999 99999999999988853
No 4
>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}
Probab=98.54 E-value=1.4e-07 Score=71.87 Aligned_cols=70 Identities=19% Similarity=0.255 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHHHhccccHhHHHHH-hhhhHHHHHHHHHHHhhhcccccccccchhhHHHHHHhhhhhhhhc
Q 023321 65 FMLGVLGICLVQIFAITGIKYSSPTLASAM-GNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSL 140 (284)
Q Consensus 65 ~~~g~~~~~~~~~~~~~al~~~~~~~a~il-~~~~Pi~~~lla~~~~~E~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 140 (284)
.+.+++++++++.++.+++++.+++.+..+ .++.|++++++++++++|+++.. +++|+.+.++|+.++..
T Consensus 33 ~~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~------~~~Gi~LIi~GV~ll~~ 103 (137)
T 2i68_A 33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIINL 103 (137)
T ss_dssp -CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence 367777789999999999999999999988 89999999999999999999999 99999999999998864
No 5
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=52.44 E-value=39 Score=29.55 Aligned_cols=44 Identities=9% Similarity=-0.083 Sum_probs=23.6
Q ss_pred chHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHhhcccccc
Q 023321 217 PLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKE 260 (284)
Q Consensus 217 ~l~pv~a~i~~~~~~gE~~~~~~~~G~~li~~g~~l~~~~~~~~ 260 (284)
...++++.+...+..-..-....+.|...++.|+.++...++++
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~~~~~~~ 431 (445)
T 3l1l_A 388 LAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRL 431 (445)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 34445554444333322222345668888888888776544433
No 6
>3rko_J NADH-quinone oxidoreductase subunit J; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli}
Probab=36.26 E-value=38 Score=26.37 Aligned_cols=35 Identities=11% Similarity=0.092 Sum_probs=24.9
Q ss_pred HHHHHHHhCCCCchhhHHHHHHHH--HHHHHhhcccc
Q 023321 224 VFMAVMFLGETPHLGSLIGTVVIA--FGFYAVIWAQG 258 (284)
Q Consensus 224 ~i~~~~~~gE~~~~~~~~G~~li~--~g~~l~~~~~~ 258 (284)
--+|..++++-.-+-+..+.++.. .|.+...++++
T Consensus 127 ~~iG~~Lft~Y~lpFElaSvlLLvAmIGAIvLarr~~ 163 (184)
T 3rko_J 127 KAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREER 163 (184)
T ss_dssp HHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 357788899988888899877663 56666665443
No 7
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=32.35 E-value=31 Score=22.35 Aligned_cols=18 Identities=11% Similarity=0.396 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHhhccc
Q 023321 240 LIGTVVIAFGFYAVIWAQ 257 (284)
Q Consensus 240 ~~G~~li~~g~~l~~~~~ 257 (284)
++++++.+.|++++..+|
T Consensus 25 ifA~vLfi~GI~iilS~k 42 (74)
T 2zxe_G 25 IVAAVLCVIGIIILLAGK 42 (74)
T ss_dssp HHHHHHHHHHHHHHTTTC
T ss_pred hhHHHHHHHHHHHHHcCc
Confidence 456677778888876554
No 8
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*
Probab=20.75 E-value=3.8e+02 Score=22.51 Aligned_cols=32 Identities=13% Similarity=0.055 Sum_probs=20.7
Q ss_pred ccHhHHHHHhhhhHHHHHHHHHHH--hhhccccc
Q 023321 86 SSPTLASAMGNLIPGITFLLAVFF--RMEKVAIR 117 (284)
Q Consensus 86 ~~~~~a~il~~~~Pi~~~lla~~~--~~E~~~~~ 117 (284)
.+..+.+.+.....+...+.+.+. +-||..+|
T Consensus 58 ~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r 91 (438)
T 3o7q_A 58 LTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYK 91 (438)
T ss_dssp CCSHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcch
Confidence 456667777776666666555554 45787777
No 9
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}
Probab=16.15 E-value=5.2e+02 Score=22.15 Aligned_cols=190 Identities=9% Similarity=-0.073 Sum_probs=0.0
Q ss_pred hcCCCCCcCHHHHHHHHHHHHHHHHHHHHH------HHHHh-----ccccHhHHHHHhhhhHHHHHHHHHHHhh--hc-c
Q 023321 49 YRSKGPVLTFSLLCKFFMLGVLGICLVQIF------AITGI-----KYSSPTLASAMGNLIPGITFLLAVFFRM--EK-V 114 (284)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~------~~~al-----~~~~~~~a~il~~~~Pi~~~lla~~~~~--E~-~ 114 (284)
...+..+.+++.++......++....++.. +.... ...+..+.+.+.....+...+...+... || .
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~ 82 (491)
T 4aps_A 3 DKGKTFFGQPLGLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSGTIGGFVADRII 82 (491)
T ss_dssp --------CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CcchhhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q ss_pred cccccccchhhHHHHHHhhhhhhhhcccCCCCCCCCCCCCCCCCccchhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 023321 115 AIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAIVGTV 194 (284)
Q Consensus 115 ~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 194 (284)
.+| +.+-....+.++..+...-.+... .........++....
T Consensus 83 g~r------~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~l~g~~~~~ 124 (491)
T 4aps_A 83 GAR------PAVFWGGVLIMLGHIVLALPFGAS--------------------------------ALFGSIILIIIGTGF 124 (491)
T ss_dssp CHH------HHHHHHHHHHHHHHHHHHSCCSTT--------------------------------HHHHHHHHHHHHHHH
T ss_pred cch------HHHHHHHHHHHHHHHHHHHhhhHH--------------------------------HHHHHHHHHHHHHHh
Q ss_pred HHHHHHHHHHhhcCccc---------hhhhhchHHHHHHHHHHHHhC-CCCchhhHHHHHHHHHHHHHhhcccccccccc
Q 023321 195 IRSSIIAWCLQKKGPVF---------VALFKPLGTAIAVFMAVMFLG-ETPHLGSLIGTVVIAFGFYAVIWAQGKESNMT 264 (284)
Q Consensus 195 l~~~~~~~~l~~~~~~~---------~~~~~~l~pv~a~i~~~~~~g-E~~~~~~~~G~~li~~g~~l~~~~~~~~~~~~ 264 (284)
..-.......+..++.. .+....+...++..++-.+.+ .......++..++.+.+.++....+++..+++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (491)
T 4aps_A 125 LKPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIAPLIVGAAQEAAGYHVAFSLAAIGMFIGLLVYYFGGKKTLDPH 204 (491)
T ss_dssp HHHHHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSC
T ss_pred ccchHHHHHHHHcCcccccceeeehHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhCccccccc
Q ss_pred CCCcCCcccccc
Q 023321 265 TGNVGSLESLNQ 276 (284)
Q Consensus 265 ~~~~~~~~~~~~ 276 (284)
+++++++.++++
T Consensus 205 ~~~~~~~~~~~~ 216 (491)
T 4aps_A 205 YLRPTDPLAPEE 216 (491)
T ss_dssp CSCCSCCCSHHH
T ss_pred ccCCCCccccch
No 10
>3b9w_A Ammonium transporter family; membrane protein, ammonia transport, rhesus protein, transpo protein; HET: BOG; 1.30A {Nitrosomonas europaea} PDB: 3bhs_A 3b9y_A* 3b9z_A*
Probab=13.81 E-value=6.4e+02 Score=22.07 Aligned_cols=202 Identities=13% Similarity=0.077 Sum_probs=0.0
Q ss_pred HHHHHHHH-HHHHhhhcCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhccccHhHHHHHhhhhHHHHHHHHHHHhhhc
Q 023321 35 LGTFILLH-YFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAITGIKYSSPTLASAMGNLIPGITFLLAVFFRMEK 113 (284)
Q Consensus 35 ~a~l~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~il~~~~Pi~~~lla~~~~~E~ 113 (284)
.+++.... .-.| .++..++-.+.+-..+..+|.+-.-..+..++-++.......-+.++.........+.+.+..+.
T Consensus 151 ~~aLa~a~~LG~R--~~~~~~~~~~~hn~~~~~lGt~lLW~GWfGFN~Gl~~~~~~~~a~~NT~lAaaag~l~~~~~~~~ 228 (407)
T 3b9w_A 151 YFGLGVSIALTTA--AQRAQPIESDATSDRFSMLGSMVLWLFWPSFATAIVPFEQMPQTIVNTLLALCGATLATYFLSAL 228 (407)
T ss_dssp HHHHHHHHHHCCH--HHHTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCc--cccCCCCcCCCCCHHHHHHHHHHHHHHHHhhhhhhccchhhHHHHHHhHHHHHHHHHHHHHHHHH
Q ss_pred ccccccccchhhHHHHHHhhhhhhhhcccCCCCCCCCCCCCCCCCccchhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 023321 114 VAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAIVGT 193 (284)
Q Consensus 114 ~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 193 (284)
. +++||+......-. ++|..-++ ..+....+...+..+.++.
T Consensus 229 ~-~~gK~~~~~~~nG~--LAGLVAIT-----------------------------------a~~~~v~p~~A~iIG~iaG 270 (407)
T 3b9w_A 229 F-HKGKASIVDMANAA--LAGGVAIG-----------------------------------SVCNIVGPVGAFVIGLLGG 270 (407)
T ss_dssp H-TTTCCCHHHHHHHT--THHHHHHT-----------------------------------TTTTTSCHHHHHHHHHHHH
T ss_pred H-hCCCCCHHHHHHhh--hhhhheec-----------------------------------cCCCCCCHHHHHHHHHHHH
Q ss_pred HHHHHHHHHH-------HhhcCccchhhhhchHHHHHHHHHHHHhCCCCchhhHHHHHHH-----HHHHHHhhccccccc
Q 023321 194 VIRSSIIAWC-------LQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVI-----AFGFYAVIWAQGKES 261 (284)
Q Consensus 194 ~l~~~~~~~~-------l~~~~~~~~~~~~~l~pv~a~i~~~~~~gE~~~~~~~~G~~li-----~~g~~l~~~~~~~~~ 261 (284)
.+++..+.+- +|.=|+..+-.+=-.-=+++.+.. -++....+..|++|.+.+ +.+.++...-|.|.+
T Consensus 271 ~i~~~~~~~l~~~l~~~l~iDD~l~a~~vHgv~Gi~G~l~~-glfa~~~~~~Ql~g~~~~~~~s~v~~~i~~~il~~r~~ 349 (407)
T 3b9w_A 271 AISVVGFVFIQPMLESKAKTIDTCGVHNLHGLPGLLGGFSA-ILIVPGIAVAQLTGIGITLALALIGGVIAGALIKLTGT 349 (407)
T ss_dssp HHHHHHHHTHHHHHHHHSCCCCTTCHHHHTTHHHHHHHHHH-HHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCeecchHHHHHHHHHH-HHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q ss_pred cccCCCc--------CCccccccC
Q 023321 262 NMTTGNV--------GSLESLNQK 277 (284)
Q Consensus 262 ~~~~~~~--------~~~~~~~~~ 277 (284)
++++.+. .+..++.++
T Consensus 350 ~e~e~~g~~~we~p~ld~~~hg~~ 373 (407)
T 3b9w_A 350 TKQAYEDSHEFIHLAGPEDEHKAE 373 (407)
T ss_dssp CSSTTCGGGTSSSCCCGGGC----
T ss_pred HHHHcCCcccccCccccHHHhchh
Done!