Query 023323
Match_columns 284
No_of_seqs 134 out of 715
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 03:09:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023323.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023323hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02629 powdery mildew resist 100.0 4E-96 9E-101 694.8 23.4 271 1-283 114-387 (387)
2 PF13839 PC-Esterase: GDSL/SGN 100.0 3.1E-54 6.8E-59 387.9 20.5 241 1-283 9-263 (263)
3 cd01842 SGNH_hydrolase_like_5 98.1 1.9E-05 4.1E-10 68.3 8.4 100 100-229 52-152 (183)
4 cd01834 SGNH_hydrolase_like_2 78.5 0.97 2.1E-05 37.8 1.0 98 98-230 61-158 (191)
5 PF00185 OTCace: Aspartate/orn 76.7 1.7 3.7E-05 36.7 2.1 26 6-32 1-26 (158)
6 cd01841 NnaC_like NnaC (CMP-Ne 69.1 2.3 4.9E-05 35.4 1.0 71 136-229 70-140 (174)
7 cd01841 NnaC_like NnaC (CMP-Ne 64.5 34 0.00074 28.1 7.4 12 8-19 1-12 (174)
8 cd01829 SGNH_hydrolase_peri2 S 64.1 4 8.7E-05 34.6 1.6 95 98-229 59-153 (200)
9 cd01827 sialate_O-acetylestera 63.4 39 0.00083 28.2 7.5 83 136-241 88-175 (188)
10 PRK14805 ornithine carbamoyltr 62.5 5.6 0.00012 37.3 2.4 27 4-32 144-170 (302)
11 COG2845 Uncharacterized protei 62.3 30 0.00065 33.0 7.0 25 7-31 116-140 (354)
12 cd01825 SGNH_hydrolase_peri1 S 60.6 4 8.6E-05 34.1 0.9 73 136-230 76-148 (189)
13 cd01835 SGNH_hydrolase_like_3 59.7 4.4 9.6E-05 34.3 1.1 92 97-229 68-159 (193)
14 cd01844 SGNH_hydrolase_like_6 57.2 5.4 0.00012 33.5 1.1 30 138-169 75-104 (177)
15 cd01832 SGNH_hydrolase_like_1 55.7 5.2 0.00011 33.4 0.8 70 136-230 87-156 (185)
16 cd01838 Isoamyl_acetate_hydrol 55.3 5.9 0.00013 33.2 1.1 57 98-170 63-119 (199)
17 cd01833 XynB_like SGNH_hydrola 51.3 6 0.00013 32.2 0.5 97 98-239 40-143 (157)
18 cd01831 Endoglucanase_E_like E 51.3 7.8 0.00017 32.2 1.2 28 136-165 76-103 (169)
19 cd01827 sialate_O-acetylestera 49.2 8.6 0.00019 32.2 1.1 11 9-19 2-12 (188)
20 cd01822 Lysophospholipase_L1_l 49.1 8.5 0.00018 31.7 1.1 46 98-166 64-109 (177)
21 COG0078 ArgF Ornithine carbamo 47.9 13 0.00028 35.1 2.2 23 4-28 150-172 (310)
22 PRK01713 ornithine carbamoyltr 47.6 14 0.00031 35.1 2.5 28 4-32 153-180 (334)
23 cd01820 PAF_acetylesterase_lik 47.1 6.5 0.00014 34.2 0.1 69 136-229 108-176 (214)
24 PLN02342 ornithine carbamoyltr 47.0 15 0.00032 35.3 2.5 27 4-32 191-217 (348)
25 PRK04284 ornithine carbamoyltr 44.0 18 0.00039 34.4 2.6 28 3-31 151-178 (332)
26 PRK10528 multifunctional acyl- 43.1 13 0.00028 31.8 1.3 14 7-20 10-23 (191)
27 PF06462 Hyd_WA: Propeller; I 42.3 24 0.00053 21.7 2.1 21 157-177 8-29 (32)
28 cd01836 FeeA_FeeB_like SGNH_hy 41.7 13 0.00029 31.2 1.2 95 98-229 67-161 (191)
29 cd00229 SGNH_hydrolase SGNH_hy 41.3 11 0.00024 29.8 0.6 55 96-169 63-117 (187)
30 PRK03515 ornithine carbamoyltr 41.0 21 0.00045 34.1 2.5 27 4-31 153-179 (336)
31 cd01839 SGNH_arylesterase_like 40.5 15 0.00032 31.6 1.3 34 136-169 100-136 (208)
32 cd04501 SGNH_hydrolase_like_4 40.4 14 0.0003 30.8 1.1 91 98-230 59-149 (183)
33 PRK02102 ornithine carbamoyltr 38.9 24 0.00052 33.6 2.6 27 4-31 152-178 (331)
34 PRK07200 aspartate/ornithine c 38.9 27 0.00059 34.1 2.9 28 4-31 184-216 (395)
35 cd01830 XynE_like SGNH_hydrola 38.7 16 0.00035 31.4 1.2 32 135-170 100-131 (204)
36 PRK08192 aspartate carbamoyltr 37.0 27 0.00058 33.4 2.5 29 4-32 156-184 (338)
37 PRK11891 aspartate carbamoyltr 35.4 30 0.00065 34.2 2.6 27 5-31 239-265 (429)
38 cd00885 cinA Competence-damage 35.2 26 0.00056 29.9 1.9 23 259-281 141-163 (170)
39 PLN02527 aspartate carbamoyltr 34.6 32 0.00069 32.3 2.6 28 4-31 148-175 (306)
40 PRK03670 competence damage-ind 34.2 27 0.00059 31.9 2.0 23 259-281 150-172 (252)
41 PRK00856 pyrB aspartate carbam 33.9 33 0.00071 32.3 2.6 29 4-32 153-181 (305)
42 TIGR00658 orni_carb_tr ornithi 33.7 33 0.00072 32.2 2.5 26 4-31 145-170 (304)
43 PRK00779 ornithine carbamoyltr 33.5 32 0.0007 32.3 2.4 26 4-31 149-174 (304)
44 PRK12562 ornithine carbamoyltr 33.4 33 0.00072 32.7 2.5 27 5-32 154-180 (334)
45 PF12026 DUF3513: Domain of un 32.9 3.8 8.3E-05 36.6 -3.6 16 5-20 132-147 (210)
46 PF00919 UPF0004: Uncharacteri 31.8 1.5E+02 0.0032 22.9 5.6 42 95-163 33-74 (98)
47 PF13472 Lipase_GDSL_2: GDSL-l 31.8 1.4E+02 0.003 23.6 5.7 95 97-230 60-154 (179)
48 cd04506 SGNH_hydrolase_YpmR_li 31.7 23 0.00051 30.0 1.1 29 136-166 101-129 (204)
49 TIGR00670 asp_carb_tr aspartat 31.2 39 0.00085 31.7 2.6 29 4-32 147-175 (301)
50 COG0621 MiaB 2-methylthioadeni 31.1 2.1E+02 0.0046 28.4 7.7 41 95-163 37-77 (437)
51 PF01861 DUF43: Protein of unk 31.0 24 0.00052 32.2 1.1 12 5-16 43-54 (243)
52 cd01821 Rhamnogalacturan_acety 30.1 27 0.00058 29.6 1.2 93 97-229 64-156 (198)
53 PRK14804 ornithine carbamoyltr 28.3 45 0.00097 31.4 2.5 26 4-31 150-175 (311)
54 PHA03298 envelope glycoprotein 28.1 28 0.00061 28.9 0.9 21 11-31 35-60 (167)
55 cd04502 SGNH_hydrolase_like_7 28.0 28 0.00061 28.7 1.0 68 136-229 69-136 (171)
56 PRK10113 cell division modulat 26.1 38 0.00082 24.9 1.2 16 4-19 38-55 (80)
57 cd01840 SGNH_hydrolase_yrhL_li 26.0 30 0.00065 28.2 0.8 26 204-230 96-121 (150)
58 PRK02255 putrescine carbamoylt 24.0 60 0.0013 31.0 2.5 26 4-31 151-176 (338)
59 PF15590 Imm15: Immunity prote 23.6 82 0.0018 23.1 2.5 23 152-174 28-50 (69)
60 PF09949 DUF2183: Uncharacteri 23.2 45 0.00097 26.1 1.2 18 2-19 59-76 (100)
61 PRK13376 pyrB bifunctional asp 22.5 67 0.0014 32.7 2.6 27 4-30 171-197 (525)
62 COG0034 PurF Glutamine phospho 21.5 47 0.001 33.1 1.2 30 3-32 344-374 (470)
No 1
>PLN02629 powdery mildew resistance 5
Probab=100.00 E-value=4e-96 Score=694.78 Aligned_cols=271 Identities=41% Similarity=0.734 Sum_probs=235.9
Q ss_pred CcccccCCceEEEeccccchhHHHHhhhhhccccCCcceeeeeCceEEEEEeccceEEEEEeccccccccCCCccccccc
Q 023323 1 MLETLRGKRMMFVGDSLNRGQYISMVCLLHRLVPENAKSMETFDSLTVFTAKDYNTTIEFYWAPFLLKSNADNAVIHRIT 80 (284)
Q Consensus 1 fL~~~RgK~i~FVGDSl~RNq~eSLlClL~~~~p~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLV~~~~~~~~~~~~~ 80 (284)
|||+|||||||||||||+|||||||+|||++++|...+.....++..+|+|++||+||+||||||||+.++++ .
T Consensus 114 fLe~~RgKrl~FVGDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~------~ 187 (387)
T PLN02629 114 FLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQ------G 187 (387)
T ss_pred HHHHhcCCeEEEeccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCC------C
Confidence 8999999999999999999999999999999998766555555678899999999999999999999987543 2
Q ss_pred ceeeecCcccccccCCCCccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcce
Q 023323 81 DRIVRKGSIDNHGQHWKGADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTR 160 (284)
Q Consensus 81 ~~~l~ld~~~~~~~~w~~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~ 160 (284)
.++|++|.+|++++.|.++|||||||||||+++.. ...++++++++.++++|++.+||++||+||++||++++++.+++
T Consensus 188 ~~~l~LD~id~~a~~w~~~DvlVfntghWw~~~~~-~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~ 266 (387)
T PLN02629 188 KRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGS-LQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTR 266 (387)
T ss_pred ceeEEecCcchhhhhhccCCEEEEeCccccCCCCe-eEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcE
Confidence 34799999998899999999999999999998863 34467788888899999999999999999999999999988999
Q ss_pred EEEEecCCCCCCCCCCCCC---CCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcCCCcceEEeeccccccccccCCC
Q 023323 161 VFFTSMSPTHAKSIEWGGE---PGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLSSYRKDAHT 237 (284)
Q Consensus 161 vf~Rt~sP~Hf~~g~W~~~---~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdiT~ls~~R~DgHp 237 (284)
|||||+||+|||||+||++ .+|+|+++|+|+.++++.+ .....+++++++.++++.+|+|||||+||++||||||
T Consensus 267 vffrT~SP~Hfe~g~Wn~gg~~~~~~C~~et~P~~~~~~~~--~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHP 344 (387)
T PLN02629 267 VFFQSISPTHYNPSEWSAGASTTTKNCYGETTPMSGMTYPG--AYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHP 344 (387)
T ss_pred EEEEecCcccccCCCcCCCCCCCCCCCccCCccCcCccccC--cchHHHHHHHHHHHhcCCceEEEechhhhhcCCCCCc
Confidence 9999999999999999982 2357989999998766542 2344566888999888999999999999999999999
Q ss_pred ccccCcCCCCCccccCCCCCCCCcccccCCCchHHHHHHHHHhhcC
Q 023323 238 SIYKKQWNPLSPEQVANPVSYADCTHWCLPGLQDTWNELLFTKLFY 283 (284)
Q Consensus 238 ~~y~~~~~~~~~~~~~~~~~~~DC~HWCLPGv~D~WNelL~~~L~~ 283 (284)
|+|+. +.++++++++..++||+||||||||||||||||++|++
T Consensus 345 s~Y~~---~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~~ 387 (387)
T PLN02629 345 SIYSG---DLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF 387 (387)
T ss_pred ccccC---CCchhhccCCCCCCCcccccCCCCCccHHHHHHHHHhC
Confidence 99973 23344556666789999999999999999999999974
No 2
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Probab=100.00 E-value=3.1e-54 Score=387.85 Aligned_cols=241 Identities=37% Similarity=0.698 Sum_probs=183.5
Q ss_pred CcccccCCceEEEeccccchhHHHHhhhhhcccc-----CCcceeeeeCceEEEEEeccceEEEEEeccccccccCCCcc
Q 023323 1 MLETLRGKRMMFVGDSLNRGQYISMVCLLHRLVP-----ENAKSMETFDSLTVFTAKDYNTTIEFYWAPFLLKSNADNAV 75 (284)
Q Consensus 1 fL~~~RgK~i~FVGDSl~RNq~eSLlClL~~~~p-----~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLV~~~~~~~~ 75 (284)
||++||||+|+|||||++|||++||+|+|.+..+ .........++...|.|+++|+||+|+|+|||++.
T Consensus 9 cL~~lr~k~i~fiGDS~~Rq~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~p~l~~~------ 82 (263)
T PF13839_consen 9 CLQRLRNKRIVFIGDSTTRQQYESLVCLLGPEVPSWQESPHSGIEFPNHRNFRYNFPDYNVTLSFYWDPFLVDQ------ 82 (263)
T ss_pred HHHHccCCEEEEEechhhHHHHHHHHHHHhccccccccccccccccccCCceEEeecCCCeEEEEecccccccc------
Confidence 5778889999999999999999999999999866 22222222245677889999999999999999975
Q ss_pred cccccceeeecCccc-ccccCCC----CccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHH
Q 023323 76 IHRITDRIVRKGSID-NHGQHWK----GADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWV 150 (284)
Q Consensus 76 ~~~~~~~~l~ld~~~-~~~~~w~----~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v 150 (284)
+|.++ ++...|. ..||||||+|+||.+.+ ....+ ++. .++...++|+..++++++++
T Consensus 83 ----------l~~~~~~~~~~~~~~~~~pdvvV~nsG~W~~~~~-~~~~~------~~~-~~~~~~~~y~~~l~~~~~~~ 144 (263)
T PF13839_consen 83 ----------LDSIDEEIANNWPTSGARPDVVVINSGLWYLRRS-GFIEW------GDN-KEINPLEAYRNRLRTLADWV 144 (263)
T ss_pred ----------ccccchhhhccccccccCCCEEEEEcchhhhhcc-hhccc------CCC-cCcchHHHHHHHHHHHHHHH
Confidence 12222 2334444 89999999999998764 22212 222 66788999999999999999
Q ss_pred HhhCCCCc--ceEEEEecCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcCCCcceEEeec-cc
Q 023323 151 KLNMDPKK--TRVFFTSMSPTHAKSIEWGGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNI-TQ 227 (284)
Q Consensus 151 ~~~~~~~~--~~vf~Rt~sP~Hf~~g~W~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdi-T~ 227 (284)
.+.+++.+ ++||||+++|+||++++|++ ||.|. +....+ .......++++++.+++ +.+.++++||| |.
T Consensus 145 ~~~~~~~~~~~~v~~r~~~P~h~~~~~~~~--gg~c~----~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~ldi~~~ 216 (263)
T PF13839_consen 145 RRLLDRSKPPTRVFWRTTSPVHFEGGDWNS--GGSCN----PPRREE-ITNEQIDELNEALREAL-KKNSRVHLLDIFTM 216 (263)
T ss_pred HhhhccccccceEEEEecCCcccccccccc--CCCcC----cccccC-CCHHHHHHHHHHHHHHh-hcCCCceeeeecch
Confidence 87776655 89999999999999999999 99994 111111 11111233444444444 35689999999 99
Q ss_pred cccccc-cCCCccccCcCCCCCccccCCCCCCCCcccccCCCchHHHHHHHHHhhcC
Q 023323 228 LSSYRK-DAHTSIYKKQWNPLSPEQVANPVSYADCTHWCLPGLQDTWNELLFTKLFY 283 (284)
Q Consensus 228 ls~~R~-DgHp~~y~~~~~~~~~~~~~~~~~~~DC~HWCLPGv~D~WNelL~~~L~~ 283 (284)
++.+|+ |||||+|++.+.. ..+||+|||+|||+|+||+|||++||.
T Consensus 217 ~~~~r~~d~H~~~~~~~~~~----------~~~Dc~Hw~~p~v~d~~~~lL~~~lcn 263 (263)
T PF13839_consen 217 LSSFRPDDAHPGIYRNQWPR----------QPQDCLHWCLPGVIDTWNELLLNLLCN 263 (263)
T ss_pred hhhccccccCcccccCCCCC----------CCCCCcCcCCCcHHHHHHHHHHHHhhC
Confidence 999999 9999999854311 158999999999999999999999984
No 3
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.06 E-value=1.9e-05 Score=68.26 Aligned_cols=100 Identities=13% Similarity=0.155 Sum_probs=61.3
Q ss_pred cEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCCCCC
Q 023323 100 DILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWGGE 179 (284)
Q Consensus 100 DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~~~ 179 (284)
||||||+|-|=.. . +| + ...+-|++-|.+.+.-+.+-+ |..++++|.|++|- -++..
T Consensus 52 DVIi~Ns~LWDl~-----r-y~-----~------~~~~~Y~~NL~~Lf~rLk~~l-p~~allIW~tt~Pv-~~~~~---- 108 (183)
T cd01842 52 DLVIMNSCLWDLS-----R-YQ-----R------NSMKTYRENLERLFSKLDSVL-PIECLIVWNTAMPV-AEEIK---- 108 (183)
T ss_pred eEEEEecceeccc-----c-cC-----C------CCHHHHHHHHHHHHHHHHhhC-CCccEEEEecCCCC-CcCCc----
Confidence 9999999999321 1 11 1 247889999999998886644 56789999999996 22211
Q ss_pred CCCCCCCCCccCCC-CCCCCCCCcHHHHHHHHHHhcCCCcceEEeeccccc
Q 023323 180 PGKNCYNETTPIED-PNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLS 229 (284)
Q Consensus 180 ~gg~C~~~t~P~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdiT~ls 229 (284)
|| +-.|--. ..........+.|.+..++.++ ..|.+||...-.
T Consensus 109 -gg----fl~~~~~~~~~~lr~dv~eaN~~A~~va~~--~~~dVlDLh~~f 152 (183)
T cd01842 109 -GG----FLLPELHDLSKSLRYDVLEGNFYSATLAKC--YGFDVLDLHYHF 152 (183)
T ss_pred -Cc----eeccccccccccchhHHHHHHHHHHHHHHH--cCceeeehHHHH
Confidence 22 1122111 0111111233456666666554 469999998866
No 4
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=78.45 E-value=0.97 Score=37.76 Aligned_cols=98 Identities=8% Similarity=0.035 Sum_probs=49.1
Q ss_pred CccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCCC
Q 023323 98 GADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWG 177 (284)
Q Consensus 98 ~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~ 177 (284)
..|++||..|.-=.. .+.. .....+.|+..|+.+++.+.+. .....|++-+.-| ....
T Consensus 61 ~~d~v~l~~G~ND~~-------~~~~--------~~~~~~~~~~~l~~~v~~~~~~--~~~~~ii~~~p~~-~~~~---- 118 (191)
T cd01834 61 KPDVVSIMFGINDSF-------RGFD--------DPVGLEKFKTNLRRLIDRLKNK--ESAPRIVLVSPIA-YEAN---- 118 (191)
T ss_pred CCCEEEEEeecchHh-------hccc--------ccccHHHHHHHHHHHHHHHHcc--cCCCcEEEECCcc-cCCC----
Confidence 479999987753110 0000 1124677889999998888532 2344566644322 1111
Q ss_pred CCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcCCCcceEEeecccccc
Q 023323 178 GEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLSS 230 (284)
Q Consensus 178 ~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdiT~ls~ 230 (284)
.+ .. |.... ........+++++++.++ .++.++|+...+.
T Consensus 119 -----~~-~~--~~~~~---~~~~~~~~n~~l~~~a~~--~~~~~iD~~~~~~ 158 (191)
T cd01834 119 -----ED-PL--PDGAE---YNANLAAYADAVRELAAE--NGVAFVDLFTPMK 158 (191)
T ss_pred -----CC-CC--CChHH---HHHHHHHHHHHHHHHHHH--cCCeEEecHHHHH
Confidence 11 00 11000 011122344555555443 3599999998764
No 5
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=76.72 E-value=1.7 Score=36.69 Aligned_cols=26 Identities=27% Similarity=0.497 Sum_probs=22.4
Q ss_pred cCCceEEEeccccchhHHHHhhhhhcc
Q 023323 6 RGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 6 RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.|++|+|||| ..-|-..||+.+|+.-
T Consensus 1 ~gl~i~~vGD-~~~rv~~Sl~~~~~~~ 26 (158)
T PF00185_consen 1 KGLKIAYVGD-GHNRVAHSLIELLAKF 26 (158)
T ss_dssp TTEEEEEESS-TTSHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-CCChHHHHHHHHHHHc
Confidence 4899999999 6577899999999864
No 6
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=69.12 E-value=2.3 Score=35.40 Aligned_cols=71 Identities=13% Similarity=0.265 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcC
Q 023323 136 ENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWGGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGN 215 (284)
Q Consensus 136 ~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (284)
.+.|+..++++++.+.+. ..++.|++-+..|...+. .+ ... ......+++++++++.++
T Consensus 70 ~~~~~~~~~~l~~~~~~~--~p~~~vi~~~~~p~~~~~---------~~---------~~~-~~~~~~~~n~~l~~~a~~ 128 (174)
T cd01841 70 SNQFIKWYRDIIEQIREE--FPNTKIYLLSVLPVLEED---------EI---------KTR-SNTRIQRLNDAIKELAPE 128 (174)
T ss_pred HHHHHHHHHHHHHHHHHH--CCCCEEEEEeeCCcCccc---------cc---------ccC-CHHHHHHHHHHHHHHHHH
Confidence 566888888888887553 235678888887765321 01 000 011124566667766554
Q ss_pred CCcceEEeeccccc
Q 023323 216 SKFPITFLNITQLS 229 (284)
Q Consensus 216 ~~~~v~lLdiT~ls 229 (284)
. .+.++|+..+.
T Consensus 129 ~--~~~~id~~~~~ 140 (174)
T cd01841 129 L--GVTFIDLNDVL 140 (174)
T ss_pred C--CCEEEEcHHHH
Confidence 3 48999998764
No 7
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=64.45 E-value=34 Score=28.14 Aligned_cols=12 Identities=50% Similarity=0.902 Sum_probs=11.0
Q ss_pred CceEEEeccccc
Q 023323 8 KRMMFVGDSLNR 19 (284)
Q Consensus 8 K~i~FVGDSl~R 19 (284)
|+|+|+|||++.
T Consensus 1 ~~iv~~GdS~t~ 12 (174)
T cd01841 1 KNIVFIGDSLFE 12 (174)
T ss_pred CCEEEEcchhhh
Confidence 789999999986
No 8
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=64.15 E-value=4 Score=34.63 Aligned_cols=95 Identities=11% Similarity=0.035 Sum_probs=54.2
Q ss_pred CccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCCC
Q 023323 98 GADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWG 177 (284)
Q Consensus 98 ~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~ 177 (284)
..|++||+.|..=.... ...+.. .....-.+.++|+..++.+++.+.+ .+.+|++-+..|.+..
T Consensus 59 ~pd~vii~~G~ND~~~~---~~~~~~----~~~~~~~~~~~~~~~l~~lv~~~~~----~~~~vili~~pp~~~~----- 122 (200)
T cd01829 59 KPDVVVVFLGANDRQDI---RDGDGY----LKFGSPEWEEEYRQRIDELLNVARA----KGVPVIWVGLPAMRSP----- 122 (200)
T ss_pred CCCEEEEEecCCCCccc---cCCCce----eecCChhHHHHHHHHHHHHHHHHHh----CCCcEEEEcCCCCCCh-----
Confidence 57999999998742110 000000 0000112457888888888887743 2456888777665421
Q ss_pred CCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcCCCcceEEeeccccc
Q 023323 178 GEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLS 229 (284)
Q Consensus 178 ~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdiT~ls 229 (284)
.+ + ......+++++++.++. .+.++|++.+.
T Consensus 123 -----~~-~-------------~~~~~~~~~~~~~a~~~--~~~~id~~~~~ 153 (200)
T cd01829 123 -----KL-S-------------ADMVYLNSLYREEVAKA--GGEFVDVWDGF 153 (200)
T ss_pred -----hH-h-------------HHHHHHHHHHHHHHHHc--CCEEEEhhHhh
Confidence 11 0 01234566676666554 48999998765
No 9
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=63.37 E-value=39 Score=28.16 Aligned_cols=83 Identities=13% Similarity=0.227 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcC
Q 023323 136 ENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWGGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGN 215 (284)
Q Consensus 136 ~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (284)
.+.|+..++.+++.+.+. ..+..+++-|..|.... .+ .+ ... .......++.++++.++
T Consensus 88 ~~~~~~~l~~li~~i~~~--~~~~~iil~t~~p~~~~--~~------~~------~~~-----~~~~~~~~~~~~~~a~~ 146 (188)
T cd01827 88 KDDFKKDYETMIDSFQAL--PSKPKIYICYPIPAYYG--DG------GF------IND-----NIIKKEIQPMIDKIAKK 146 (188)
T ss_pred HHHHHHHHHHHHHHHHHH--CCCCeEEEEeCCccccc--CC------Cc------cch-----HHHHHHHHHHHHHHHHH
Confidence 467888888888887553 23567888887775421 11 11 000 00012334455555443
Q ss_pred CCcceEEeecccccc----ccccC-CCcccc
Q 023323 216 SKFPITFLNITQLSS----YRKDA-HTSIYK 241 (284)
Q Consensus 216 ~~~~v~lLdiT~ls~----~R~Dg-Hp~~y~ 241 (284)
..+.++|+...+. +=+|+ ||+..+
T Consensus 147 --~~~~~vD~~~~~~~~~~~~~Dg~Hpn~~G 175 (188)
T cd01827 147 --LNLKLIDLHTPLKGKPELVPDWVHPNEKG 175 (188)
T ss_pred --cCCcEEEccccccCCccccCCCCCcCHHH
Confidence 4588889876643 33577 877544
No 10
>PRK14805 ornithine carbamoyltransferase; Provisional
Probab=62.52 E-value=5.6 Score=37.34 Aligned_cols=27 Identities=19% Similarity=0.251 Sum_probs=22.5
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.+.|++|+||||. .|-..||+.+|+..
T Consensus 144 ~l~g~kva~vGD~--~~v~~S~~~~~~~~ 170 (302)
T PRK14805 144 DVSKVKLAYVGDG--NNVTHSLMYGAAIL 170 (302)
T ss_pred CcCCcEEEEEcCC--CccHHHHHHHHHHc
Confidence 4789999999993 57889999998753
No 11
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=62.30 E-value=30 Score=33.05 Aligned_cols=25 Identities=28% Similarity=0.372 Sum_probs=21.2
Q ss_pred CCceEEEeccccchhHHHHhhhhhc
Q 023323 7 GKRMMFVGDSLNRGQYISMVCLLHR 31 (284)
Q Consensus 7 gK~i~FVGDSl~RNq~eSLlClL~~ 31 (284)
++++.||||||++-.-+-|.--|.+
T Consensus 116 a~kvLvvGDslm~gla~gl~~al~t 140 (354)
T COG2845 116 ADKVLVVGDSLMQGLAEGLDKALAT 140 (354)
T ss_pred CCEEEEechHHhhhhHHHHHHHhcc
Confidence 5899999999999888887777765
No 12
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=60.59 E-value=4 Score=34.15 Aligned_cols=73 Identities=11% Similarity=0.180 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcC
Q 023323 136 ENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWGGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGN 215 (284)
Q Consensus 136 ~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (284)
.+.|+..++.+++.+.+. ..+..|++-+..|.-+.. . .|..+. .....+.+++++++.++
T Consensus 76 ~~~~~~~~~~li~~i~~~--~~~~~iv~~~~~~~~~~~-------~-~~~~~~----------~~~~~~~~~~~~~~a~~ 135 (189)
T cd01825 76 ASEYRQQLREFIKRLRQI--LPNASILLVGPPDSLQKT-------G-AGRWRT----------PPGLDAVIAAQRRVAKE 135 (189)
T ss_pred HHHHHHHHHHHHHHHHHH--CCCCeEEEEcCCchhccC-------C-CCCccc----------CCcHHHHHHHHHHHHHH
Confidence 567899999999888553 236778888876643211 1 120110 11123455666666655
Q ss_pred CCcceEEeecccccc
Q 023323 216 SKFPITFLNITQLSS 230 (284)
Q Consensus 216 ~~~~v~lLdiT~ls~ 230 (284)
. .+.++|+...+.
T Consensus 136 ~--~v~~vd~~~~~~ 148 (189)
T cd01825 136 E--GIAFWDLYAAMG 148 (189)
T ss_pred c--CCeEEeHHHHhC
Confidence 4 399999987754
No 13
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=59.73 E-value=4.4 Score=34.29 Aligned_cols=92 Identities=17% Similarity=0.169 Sum_probs=48.5
Q ss_pred CCccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCC
Q 023323 97 KGADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEW 176 (284)
Q Consensus 97 ~~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W 176 (284)
...|+|||..|.= +....... .. ....+.|+..++.+++.+.+ +..|++-+..|.- +
T Consensus 68 ~~pd~V~i~~G~N-----------D~~~~~~~-~~-~~~~~~~~~~~~~ii~~~~~-----~~~vi~~~~~p~~----~- 124 (193)
T cd01835 68 NVPNRLVLSVGLN-----------DTARGGRK-RP-QLSARAFLFGLNQLLEEAKR-----LVPVLVVGPTPVD----E- 124 (193)
T ss_pred CCCCEEEEEecCc-----------ccccccCc-cc-ccCHHHHHHHHHHHHHHHhc-----CCcEEEEeCCCcc----c-
Confidence 4679999998741 11000000 00 12357888888888876633 3456776655431 0
Q ss_pred CCCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcCCCcceEEeeccccc
Q 023323 177 GGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLS 229 (284)
Q Consensus 177 ~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdiT~ls 229 (284)
...|.. .....++++.++++.++. .+.++|+....
T Consensus 125 ----------~~~~~~------~~~~~~~n~~~~~~a~~~--~~~~vd~~~~~ 159 (193)
T cd01835 125 ----------AKMPYS------NRRIARLETAFAEVCLRR--DVPFLDTFTPL 159 (193)
T ss_pred ----------cccchh------hHHHHHHHHHHHHHHHHc--CCCeEeCccch
Confidence 011111 111234556666655543 58999998653
No 14
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=57.16 E-value=5.4 Score=33.49 Aligned_cols=30 Identities=10% Similarity=0.111 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHhhCCCCcceEEEEecCCC
Q 023323 138 AYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPT 169 (284)
Q Consensus 138 Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~ 169 (284)
.|...++.+++.|.+.. .++.+++-+..|.
T Consensus 75 ~~~~~~~~~i~~i~~~~--p~~~iil~~~~~~ 104 (177)
T cd01844 75 MVRERLGPLVKGLRETH--PDTPILLVSPRYC 104 (177)
T ss_pred HHHHHHHHHHHHHHHHC--cCCCEEEEecCCC
Confidence 67888888888886632 2456777666554
No 15
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=55.74 E-value=5.2 Score=33.42 Aligned_cols=70 Identities=13% Similarity=0.184 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcC
Q 023323 136 ENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWGGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGN 215 (284)
Q Consensus 136 ~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (284)
.+.|+..++.+++.+.. +...|++-|..|. . .+ .|+.... .....+++++++++.++
T Consensus 87 ~~~~~~~~~~~i~~i~~----~~~~vil~~~~~~--~--~~------------~~~~~~~---~~~~~~~n~~l~~~a~~ 143 (185)
T cd01832 87 PDTYRADLEEAVRRLRA----AGARVVVFTIPDP--A--VL------------EPFRRRV---RARLAAYNAVIRAVAAR 143 (185)
T ss_pred HHHHHHHHHHHHHHHHh----CCCEEEEecCCCc--c--cc------------chhHHHH---HHHHHHHHHHHHHHHHH
Confidence 56788888888888752 2456777665544 0 01 1111100 00123455566666554
Q ss_pred CCcceEEeecccccc
Q 023323 216 SKFPITFLNITQLSS 230 (284)
Q Consensus 216 ~~~~v~lLdiT~ls~ 230 (284)
..+.++|+..+..
T Consensus 144 --~~v~~vd~~~~~~ 156 (185)
T cd01832 144 --YGAVHVDLWEHPE 156 (185)
T ss_pred --cCCEEEecccCcc
Confidence 3599999987754
No 16
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=55.28 E-value=5.9 Score=33.16 Aligned_cols=57 Identities=12% Similarity=0.085 Sum_probs=35.4
Q ss_pred CccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCC
Q 023323 98 GADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTH 170 (284)
Q Consensus 98 ~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~H 170 (284)
..|++||..|.-=. ...+.. .. ...+.|+..++.+++.+.+.. .++.|++-|..|..
T Consensus 63 ~pd~vii~~G~ND~-----------~~~~~~--~~-~~~~~~~~~~~~~i~~~~~~~--~~~~ii~~t~~~~~ 119 (199)
T cd01838 63 QPDLVTIFFGANDA-----------ALPGQP--QH-VPLDEYKENLRKIVSHLKSLS--PKTKVILITPPPVD 119 (199)
T ss_pred CceEEEEEecCccc-----------cCCCCC--Cc-ccHHHHHHHHHHHHHHHHhhC--CCCeEEEeCCCCCC
Confidence 79999999875311 000000 01 126788999999998885532 35678888877644
No 17
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=51.25 E-value=6 Score=32.19 Aligned_cols=97 Identities=8% Similarity=0.121 Sum_probs=55.5
Q ss_pred CccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCCC
Q 023323 98 GADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWG 177 (284)
Q Consensus 98 ~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~ 177 (284)
..|++|++.|.= +..+ + ...+.|+..++++++.+.+. ..+..+++-+..|.-..
T Consensus 40 ~pd~vvi~~G~N-----------D~~~-~-------~~~~~~~~~~~~~i~~i~~~--~p~~~ii~~~~~p~~~~----- 93 (157)
T cd01833 40 KPDVVLLHLGTN-----------DLVL-N-------RDPDTAPDRLRALIDQMRAA--NPDVKIIVATLIPTTDA----- 93 (157)
T ss_pred CCCEEEEeccCc-----------cccc-C-------CCHHHHHHHHHHHHHHHHHh--CCCeEEEEEeCCCCCCc-----
Confidence 679999988742 1100 0 12567888888888888553 23566777666553210
Q ss_pred CCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcC---CCcceEEeecccccc---ccccC-CCcc
Q 023323 178 GEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGN---SKFPITFLNITQLSS---YRKDA-HTSI 239 (284)
Q Consensus 178 ~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~lLdiT~ls~---~R~Dg-Hp~~ 239 (284)
.. .....++++++.++.++ .+..+.++|+..... +.+|| ||+.
T Consensus 94 -----~~--------------~~~~~~~n~~l~~~~~~~~~~~~~v~~vd~~~~~~~~~~~~Dg~Hpn~ 143 (157)
T cd01833 94 -----SG--------------NARIAEYNAAIPGVVADLRTAGSPVVLVDMSTGYTTADDLYDGLHPND 143 (157)
T ss_pred -----ch--------------hHHHHHHHHHHHHHHHHHhcCCCCEEEEecCCCCCCcccccCCCCCch
Confidence 00 01123445555554432 235799999998863 44544 5543
No 18
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=51.25 E-value=7.8 Score=32.21 Aligned_cols=28 Identities=0% Similarity=0.074 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcceEEEEe
Q 023323 136 ENAYRMVMKSMLRWVKLNMDPKKTRVFFTS 165 (284)
Q Consensus 136 ~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt 165 (284)
.+.|+..++.+++.+.+.. .+..+|+-+
T Consensus 76 ~~~~~~~~~~li~~i~~~~--p~~~i~~~~ 103 (169)
T cd01831 76 GEDFTNAYVEFIEELRKRY--PDAPIVLML 103 (169)
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCeEEEEe
Confidence 5667888888887775532 244555543
No 19
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=49.18 E-value=8.6 Score=32.22 Aligned_cols=11 Identities=27% Similarity=0.634 Sum_probs=9.6
Q ss_pred ceEEEeccccc
Q 023323 9 RMMFVGDSLNR 19 (284)
Q Consensus 9 ~i~FVGDSl~R 19 (284)
||+|+||||..
T Consensus 2 ~i~~~GDSit~ 12 (188)
T cd01827 2 KVACVGNSITE 12 (188)
T ss_pred eEEEEeccccc
Confidence 69999999955
No 20
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=49.08 E-value=8.5 Score=31.71 Aligned_cols=46 Identities=15% Similarity=0.245 Sum_probs=28.9
Q ss_pred CccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcceEEEEec
Q 023323 98 GADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSM 166 (284)
Q Consensus 98 ~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~ 166 (284)
..|++||..|.- .. ..+ ...+.|+..++.+++.+.+. ..++++-++
T Consensus 64 ~pd~v~i~~G~N---D~----~~~------------~~~~~~~~~l~~li~~~~~~----~~~vil~~~ 109 (177)
T cd01822 64 KPDLVILELGGN---DG----LRG------------IPPDQTRANLRQMIETAQAR----GAPVLLVGM 109 (177)
T ss_pred CCCEEEEeccCc---cc----ccC------------CCHHHHHHHHHHHHHHHHHC----CCeEEEEec
Confidence 679999998843 10 000 12456888888888877552 345666654
No 21
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=47.86 E-value=13 Score=35.08 Aligned_cols=23 Identities=26% Similarity=0.522 Sum_probs=19.3
Q ss_pred cccCCceEEEeccccchhHHHHhhh
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCL 28 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlCl 28 (284)
.++|++++||||- -|...||+=.
T Consensus 150 ~l~g~k~a~vGDg--NNv~nSl~~~ 172 (310)
T COG0078 150 SLKGLKLAYVGDG--NNVANSLLLA 172 (310)
T ss_pred cccCcEEEEEcCc--chHHHHHHHH
Confidence 3789999999999 8888888643
No 22
>PRK01713 ornithine carbamoyltransferase; Provisional
Probab=47.61 E-value=14 Score=35.14 Aligned_cols=28 Identities=18% Similarity=0.276 Sum_probs=22.3
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.+.|++|+||||-. .|-..||+-+++..
T Consensus 153 ~l~gl~ia~vGD~~-~~v~~Sl~~~~~~~ 180 (334)
T PRK01713 153 PLSEISYVYIGDAR-NNMGNSLLLIGAKL 180 (334)
T ss_pred CcCCcEEEEECCCc-cCHHHHHHHHHHHc
Confidence 46799999999954 46899999887643
No 23
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=47.13 E-value=6.5 Score=34.16 Aligned_cols=69 Identities=9% Similarity=0.262 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcC
Q 023323 136 ENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWGGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGN 215 (284)
Q Consensus 136 ~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (284)
.+.|...++.+++.+.+.. ..+.|++-+..|.... ..++ .....+.++.+++..++
T Consensus 108 ~~~~~~~l~~ii~~l~~~~--P~~~Iil~~~~p~~~~---------------~~~~-------~~~~~~~n~~l~~~~~~ 163 (214)
T cd01820 108 AEEIAEGILAIVEEIREKL--PNAKILLLGLLPRGQN---------------PNPL-------RERNAQVNRLLAVRYDG 163 (214)
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCeEEEEeccCCCCC---------------chhH-------HHHHHHHHHHHHHHhcC
Confidence 5567778888887775532 3456777777664321 0000 01123455555554433
Q ss_pred CCcceEEeeccccc
Q 023323 216 SKFPITFLNITQLS 229 (284)
Q Consensus 216 ~~~~v~lLdiT~ls 229 (284)
..++.++|+....
T Consensus 164 -~~~v~~vd~~~~~ 176 (214)
T cd01820 164 -LPNVTFLDIDKGF 176 (214)
T ss_pred -CCCEEEEeCchhh
Confidence 2479999998764
No 24
>PLN02342 ornithine carbamoyltransferase
Probab=46.95 E-value=15 Score=35.31 Aligned_cols=27 Identities=30% Similarity=0.470 Sum_probs=22.5
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.+.|++|+||||- .|-..||+.+++..
T Consensus 191 ~l~glkva~vGD~--~nva~Sli~~~~~~ 217 (348)
T PLN02342 191 RLEGTKVVYVGDG--NNIVHSWLLLAAVL 217 (348)
T ss_pred CcCCCEEEEECCC--chhHHHHHHHHHHc
Confidence 4789999999994 47999999998753
No 25
>PRK04284 ornithine carbamoyltransferase; Provisional
Probab=44.00 E-value=18 Score=34.42 Aligned_cols=28 Identities=14% Similarity=0.189 Sum_probs=22.6
Q ss_pred ccccCCceEEEeccccchhHHHHhhhhhc
Q 023323 3 ETLRGKRMMFVGDSLNRGQYISMVCLLHR 31 (284)
Q Consensus 3 ~~~RgK~i~FVGDSl~RNq~eSLlClL~~ 31 (284)
..+.|++|+||||..+ |-..||+=+|+.
T Consensus 151 g~l~g~kia~vGD~~~-~v~~Sl~~~~~~ 178 (332)
T PRK04284 151 KPYKDIKFTYVGDGRN-NVANALMQGAAI 178 (332)
T ss_pred CCcCCcEEEEecCCCc-chHHHHHHHHHH
Confidence 3578999999999755 588898887764
No 26
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=43.10 E-value=13 Score=31.84 Aligned_cols=14 Identities=36% Similarity=0.800 Sum_probs=11.7
Q ss_pred CCceEEEeccccch
Q 023323 7 GKRMMFVGDSLNRG 20 (284)
Q Consensus 7 gK~i~FVGDSl~RN 20 (284)
+.+|+|+||||...
T Consensus 10 ~~~iv~~GDSit~G 23 (191)
T PRK10528 10 ADTLLILGDSLSAG 23 (191)
T ss_pred CCEEEEEeCchhhc
Confidence 46899999999864
No 27
>PF06462 Hyd_WA: Propeller; InterPro: IPR006624 Tectonins I and II are two dominant proteins in the nuclei and nuclear matrix from plasmodia of Physarum polycephalum (Slime mold) which encode 217 and 353 amino acids, respectively. Tectonin I is homologous to the C-terminal two-thirds of tectonin II. Both proteins contain six tandem repeats that are each 33-37 amino acids in length and define a new consensus sequence. Homologous repeats are found in L-6, a bacterial lipopolysaccharide-binding lectin from horseshoe crab hemocytes. The repetitive sequences of the tectonins and L-6 are reminiscent of the WD repeats of the beta-subunit of G proteins, suggesting that they form beta-propeller domains. The tectonins may be lectins that function as part of a transmembrane signalling complex during phagocytosis [].
Probab=42.31 E-value=24 Score=21.67 Aligned_cols=21 Identities=24% Similarity=0.730 Sum_probs=17.6
Q ss_pred CcceEEEEe-cCCCCCCCCCCC
Q 023323 157 KKTRVFFTS-MSPTHAKSIEWG 177 (284)
Q Consensus 157 ~~~~vf~Rt-~sP~Hf~~g~W~ 177 (284)
..+.+++|+ +||...+|-.|.
T Consensus 8 ~~G~v~~R~Gis~~~P~G~~W~ 29 (32)
T PF06462_consen 8 SDGSVYFRTGISPSNPEGTSWE 29 (32)
T ss_pred CCCCEEEECcCCCCCCCCCCcE
Confidence 357899999 999999888885
No 28
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=41.73 E-value=13 Score=31.17 Aligned_cols=95 Identities=12% Similarity=0.109 Sum_probs=51.5
Q ss_pred CccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCCC
Q 023323 98 GADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWG 177 (284)
Q Consensus 98 ~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~ 177 (284)
..|++||+.|-= +... ....+.|+..++.+++.+.+. ...+.||+-+..|-....
T Consensus 67 ~pd~Vii~~G~N-----------D~~~--------~~~~~~~~~~l~~li~~i~~~--~~~~~iiv~~~p~~~~~~---- 121 (191)
T cd01836 67 RFDVAVISIGVN-----------DVTH--------LTSIARWRKQLAELVDALRAK--FPGARVVVTAVPPLGRFP---- 121 (191)
T ss_pred CCCEEEEEeccc-----------CcCC--------CCCHHHHHHHHHHHHHHHHhh--CCCCEEEEECCCCcccCC----
Confidence 679999987631 1100 112567888888888888553 235678887765543110
Q ss_pred CCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcCCCcceEEeeccccc
Q 023323 178 GEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLS 229 (284)
Q Consensus 178 ~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdiT~ls 229 (284)
.. ..+... . .......++++++++.++. ..+.++|+....
T Consensus 122 -----~~---~~~~~~--~-~~~~~~~~n~~~~~~a~~~-~~~~~id~~~~~ 161 (191)
T cd01836 122 -----AL---PQPLRW--L-LGRRARLLNRALERLASEA-PRVTLLPATGPL 161 (191)
T ss_pred -----CC---cHHHHH--H-HHHHHHHHHHHHHHHHhcC-CCeEEEecCCcc
Confidence 01 011100 0 0001134555566555443 479999999874
No 29
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=41.34 E-value=11 Score=29.80 Aligned_cols=55 Identities=7% Similarity=0.116 Sum_probs=32.6
Q ss_pred CCCccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCC
Q 023323 96 WKGADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPT 169 (284)
Q Consensus 96 w~~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~ 169 (284)
....|++|+..|..-..... ......+...++..++.+.+ . .....|++=+..|.
T Consensus 63 ~~~~d~vil~~G~ND~~~~~-----------------~~~~~~~~~~~~~~i~~~~~-~-~~~~~vv~~~~~~~ 117 (187)
T cd00229 63 KDKPDLVIIELGTNDLGRGG-----------------DTSIDEFKANLEELLDALRE-R-APGAKVILITPPPP 117 (187)
T ss_pred cCCCCEEEEEeccccccccc-----------------ccCHHHHHHHHHHHHHHHHH-H-CCCCcEEEEeCCCC
Confidence 35789999999887532110 12355667777777777654 1 23455666555543
No 30
>PRK03515 ornithine carbamoyltransferase subunit I; Provisional
Probab=40.95 E-value=21 Score=34.09 Aligned_cols=27 Identities=11% Similarity=0.119 Sum_probs=21.5
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHR 31 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~ 31 (284)
.+.|++|+|||| +..|-..||+=+++.
T Consensus 153 ~l~g~~ia~vGD-~~~~v~~Sl~~~~~~ 179 (336)
T PRK03515 153 AFNEMTLAYAGD-ARNNMGNSLLEAAAL 179 (336)
T ss_pred CcCCCEEEEeCC-CcCcHHHHHHHHHHH
Confidence 377999999999 434689999888763
No 31
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=40.49 E-value=15 Score=31.56 Aligned_cols=34 Identities=3% Similarity=0.090 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHhhCC---CCcceEEEEecCCC
Q 023323 136 ENAYRMVMKSMLRWVKLNMD---PKKTRVFFTSMSPT 169 (284)
Q Consensus 136 ~~Ay~~al~t~~~~v~~~~~---~~~~~vf~Rt~sP~ 169 (284)
.+.|+..++++++.+.+... ...++|++-+..|-
T Consensus 100 ~~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~ 136 (208)
T cd01839 100 AAEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPI 136 (208)
T ss_pred HHHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCcc
Confidence 56788888888888755321 13456777665553
No 32
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=40.35 E-value=14 Score=30.79 Aligned_cols=91 Identities=10% Similarity=0.080 Sum_probs=50.1
Q ss_pred CccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCCC
Q 023323 98 GADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWG 177 (284)
Q Consensus 98 ~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~ 177 (284)
..|++|++.|.-= . ..+ ...+.|.+.++.+++.+.+ ....+++-+..|.-- ..|.
T Consensus 59 ~~d~v~i~~G~ND---~----~~~------------~~~~~~~~~~~~li~~~~~----~~~~~il~~~~p~~~--~~~~ 113 (183)
T cd04501 59 KPAVVIIMGGTND---I----IVN------------TSLEMIKDNIRSMVELAEA----NGIKVILASPLPVDD--YPWK 113 (183)
T ss_pred CCCEEEEEeccCc---c----ccC------------CCHHHHHHHHHHHHHHHHH----CCCcEEEEeCCCcCc--cccc
Confidence 5799999987641 0 000 1356788888888888744 234567767666321 1121
Q ss_pred CCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcCCCcceEEeecccccc
Q 023323 178 GEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLSS 230 (284)
Q Consensus 178 ~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdiT~ls~ 230 (284)
. ..+.| .......+++++++.++. ++.++|+.....
T Consensus 114 ~-~~~~~--------------~~~~~~~n~~~~~~a~~~--~v~~vd~~~~~~ 149 (183)
T cd04501 114 P-QWLRP--------------ANKLKSLNRWLKDYAREN--GLLFLDFYSPLL 149 (183)
T ss_pred h-hhcch--------------HHHHHHHHHHHHHHHHHc--CCCEEechhhhh
Confidence 1 00011 111234555666655543 599999988644
No 33
>PRK02102 ornithine carbamoyltransferase; Validated
Probab=38.95 E-value=24 Score=33.62 Aligned_cols=27 Identities=26% Similarity=0.396 Sum_probs=22.6
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHR 31 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~ 31 (284)
.++|++|+||||.-+ |-..||+-+++.
T Consensus 152 ~l~g~~va~vGd~~~-~v~~Sl~~~~~~ 178 (331)
T PRK02102 152 PLKGLKLAYVGDGRN-NMANSLMVGGAK 178 (331)
T ss_pred CCCCCEEEEECCCcc-cHHHHHHHHHHH
Confidence 478999999999854 589999998864
No 34
>PRK07200 aspartate/ornithine carbamoyltransferase family protein; Validated
Probab=38.90 E-value=27 Score=34.15 Aligned_cols=28 Identities=21% Similarity=0.396 Sum_probs=21.5
Q ss_pred cccCCceEEEec---cccc--hhHHHHhhhhhc
Q 023323 4 TLRGKRMMFVGD---SLNR--GQYISMVCLLHR 31 (284)
Q Consensus 4 ~~RgK~i~FVGD---Sl~R--Nq~eSLlClL~~ 31 (284)
.++|++|+|||| |.+| |-..||+-+|+.
T Consensus 184 ~l~g~kVaivg~~~~~~g~~~~Va~Sl~~~~~~ 216 (395)
T PRK07200 184 NLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTR 216 (395)
T ss_pred ccCCCEEEEEeccccccCCcchHHHHHHHHHHH
Confidence 478999999998 3366 667888887764
No 35
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=38.73 E-value=16 Score=31.35 Aligned_cols=32 Identities=13% Similarity=0.213 Sum_probs=23.8
Q ss_pred hHHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCC
Q 023323 135 TENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTH 170 (284)
Q Consensus 135 ~~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~H 170 (284)
..+.|+..++++++.+.+. ..+|++-|..|-.
T Consensus 100 ~~~~~~~~l~~ii~~~~~~----~~~vil~t~~P~~ 131 (204)
T cd01830 100 TAEELIAGYRQLIRRAHAR----GIKVIGATITPFE 131 (204)
T ss_pred CHHHHHHHHHHHHHHHHHC----CCeEEEecCCCCC
Confidence 3567888999999877552 4678888888743
No 36
>PRK08192 aspartate carbamoyltransferase; Provisional
Probab=37.04 E-value=27 Score=33.38 Aligned_cols=29 Identities=24% Similarity=0.226 Sum_probs=23.2
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.+.|++|+||||-..-|-+-||+-+|+..
T Consensus 156 ~l~g~kia~vGD~~~~rv~~Sl~~~l~~~ 184 (338)
T PRK08192 156 GIDGMHIAMVGDLKFGRTVHSLSRLLCMY 184 (338)
T ss_pred CcCCCEEEEECcCCCCchHHHHHHHHHHh
Confidence 47899999999975457899998877643
No 37
>PRK11891 aspartate carbamoyltransferase; Provisional
Probab=35.37 E-value=30 Score=34.25 Aligned_cols=27 Identities=30% Similarity=0.329 Sum_probs=22.7
Q ss_pred ccCCceEEEeccccchhHHHHhhhhhc
Q 023323 5 LRGKRMMFVGDSLNRGQYISMVCLLHR 31 (284)
Q Consensus 5 ~RgK~i~FVGDSl~RNq~eSLlClL~~ 31 (284)
+.|++|+||||-..-|-+.||+-+|+.
T Consensus 239 l~G~kIa~vGD~~~~rv~~Sl~~~la~ 265 (429)
T PRK11891 239 VDGAHIALVGDLKYGRTVHSLVKLLAL 265 (429)
T ss_pred cCCCEEEEECcCCCChHHHHHHHHHHH
Confidence 789999999998655789999988753
No 38
>cd00885 cinA Competence-damaged protein. CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, where the domain is presumed to bind molybdopterin.
Probab=35.18 E-value=26 Score=29.93 Aligned_cols=23 Identities=17% Similarity=0.333 Sum_probs=18.9
Q ss_pred CCcccccCCCchHHHHHHHHHhh
Q 023323 259 ADCTHWCLPGLQDTWNELLFTKL 281 (284)
Q Consensus 259 ~DC~HWCLPGv~D~WNelL~~~L 281 (284)
++|..+||||||..-..+|-+.+
T Consensus 141 ~~~~i~~lPG~P~e~~~m~~~~~ 163 (170)
T cd00885 141 NGKNVFLLPGVPSEMKPMLEEEV 163 (170)
T ss_pred CCeEEEEECCChHHHHHHHHHHH
Confidence 47999999999998888876543
No 39
>PLN02527 aspartate carbamoyltransferase
Probab=34.58 E-value=32 Score=32.35 Aligned_cols=28 Identities=32% Similarity=0.418 Sum_probs=22.3
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHR 31 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~ 31 (284)
.++|++|+||||-.+=|-+.||+=+|+.
T Consensus 148 ~l~g~kva~vGD~~~~rv~~Sl~~~~~~ 175 (306)
T PLN02527 148 RLDGIKVGLVGDLANGRTVRSLAYLLAK 175 (306)
T ss_pred CcCCCEEEEECCCCCChhHHHHHHHHHh
Confidence 3789999999998754688998877653
No 40
>PRK03670 competence damage-inducible protein A; Provisional
Probab=34.18 E-value=27 Score=31.93 Aligned_cols=23 Identities=17% Similarity=0.391 Sum_probs=19.5
Q ss_pred CCcccccCCCchHHHHHHHHHhh
Q 023323 259 ADCTHWCLPGLQDTWNELLFTKL 281 (284)
Q Consensus 259 ~DC~HWCLPGv~D~WNelL~~~L 281 (284)
+.|.++||||||-.+..||-..+
T Consensus 150 ~~~~v~~lPGvP~e~~~M~~~~v 172 (252)
T PRK03670 150 KGTKIFVLPGMPREMKAMLEKEV 172 (252)
T ss_pred CCeEEEEeCCChHHHHHHHHHHH
Confidence 46899999999999999887644
No 41
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=33.93 E-value=33 Score=32.26 Aligned_cols=29 Identities=31% Similarity=0.345 Sum_probs=23.7
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.++|++|+||||-..-|-..||+=+++..
T Consensus 153 ~l~g~kv~~vGD~~~~~v~~Sl~~~~~~~ 181 (305)
T PRK00856 153 RLEGLKVAIVGDIKHSRVARSNIQALTRL 181 (305)
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHc
Confidence 47899999999977568899988877654
No 42
>TIGR00658 orni_carb_tr ornithine carbamoyltransferase. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.
Probab=33.72 E-value=33 Score=32.16 Aligned_cols=26 Identities=27% Similarity=0.496 Sum_probs=21.8
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHR 31 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~ 31 (284)
.+.|++|++|||. + |-..||+.+|+.
T Consensus 145 ~l~g~~v~~vGd~-~-~v~~Sl~~~l~~ 170 (304)
T TIGR00658 145 KLKGVKVVYVGDG-N-NVCNSLMLAGAK 170 (304)
T ss_pred CCCCcEEEEEeCC-C-chHHHHHHHHHH
Confidence 3688999999996 3 689999998864
No 43
>PRK00779 ornithine carbamoyltransferase; Provisional
Probab=33.45 E-value=32 Score=32.26 Aligned_cols=26 Identities=27% Similarity=0.358 Sum_probs=21.3
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHR 31 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~ 31 (284)
.+.|++|++||| .+ |-..||+-+|+.
T Consensus 149 ~l~gl~i~~vGd-~~-~v~~Sl~~~l~~ 174 (304)
T PRK00779 149 SLKGLKVAWVGD-GN-NVANSLLLAAAL 174 (304)
T ss_pred CcCCcEEEEEeC-CC-ccHHHHHHHHHH
Confidence 478999999999 34 588999988864
No 44
>PRK12562 ornithine carbamoyltransferase subunit F; Provisional
Probab=33.39 E-value=33 Score=32.70 Aligned_cols=27 Identities=19% Similarity=0.183 Sum_probs=22.4
Q ss_pred ccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 5 LRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 5 ~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
++|++|+||||-.+ |-..||+-+++..
T Consensus 154 l~gl~va~vGD~~~-~v~~S~~~~~~~~ 180 (334)
T PRK12562 154 FNEMTLVYAGDARN-NMGNSMLEAAALT 180 (334)
T ss_pred cCCcEEEEECCCCC-CHHHHHHHHHHHc
Confidence 67999999999864 6999999887643
No 45
>PF12026 DUF3513: Domain of unknown function (DUF3513); InterPro: IPR021901 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is typically between 192 to 218 amino acids in length. This domain is found associated with PF00018 from PFAM, PF08824 from PFAM. This domain has a conserved QPP sequence motif. ; PDB: 3T6G_D 1X27_N.
Probab=32.91 E-value=3.8 Score=36.57 Aligned_cols=16 Identities=38% Similarity=0.854 Sum_probs=12.7
Q ss_pred ccCCceEEEeccccch
Q 023323 5 LRGKRMMFVGDSLNRG 20 (284)
Q Consensus 5 ~RgK~i~FVGDSl~RN 20 (284)
|-|-+++||||+|.|+
T Consensus 132 l~ahkLVfiGDTl~r~ 147 (210)
T PF12026_consen 132 LSAHKLVFIGDTLCRE 147 (210)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred EEeeeeeeeccHHHHH
Confidence 4455789999999985
No 46
>PF00919 UPF0004: Uncharacterized protein family UPF0004; InterPro: IPR013848 The methylthiotransferase (MTTase) or miaB-like family is named after the (dimethylallyl)adenosine tRNA MTTase miaB protein, which catalyses a C-H to C-S bond conversion in the methylthiolation of tRNA. A related bacterial enzyme rimO performs a similar methylthiolation, but on a protein substrate. RimO acts on the ribosomal protein S12 and forms a separate MTTase subfamily. The miaB-subfamily includes mammalian CDK5 regulatory subunit-associated proteins and similar proteins in other eukaryotes. Two other subfamilies, yqeV and CDKAL1, are named after a Bacillus subtilis and a human protein, respectively. While yqeV-like proteins are found in bacteria, CDKAL1 subfamily members occur in eukaryotes and in archaebacteria. The likely MTTases from these 4 subfamilies contain an N-terminal MTTase domain, a central radical generating fold and a C-terminal TRAM domain (see PDOC50926 from PROSITEDOC). The core forms a radical SAM fold (or AdoMet radical), containing a cysteine motif CxxxCxxC that binds a [4Fe-4S] cluster [, , ]. A reducing equivalent from the [4Fe-4S]+ cluster is used to cleave S-adenosylmethionine (SAM) to generate methionine and a 5'-deoxyadenosyl radical. The latter is thought to produce a reactive substrate radical that is amenable to sulphur insertion [, ]. The N-terminal MTTase domain contains 3 cysteines that bind a second [4Fe-4S] cluster, in addition to the radical-generating [4Fe-4S] cluster, which could be involved in the thiolation reaction. The C-terminal TRAM domain is not shared with other radical SAM proteins outside the MTTase family. The TRAM domain can bind to RNA substrate and seems to be important for substrate recognition. The tertiary structure of the central radical SAM fold has six beta/alpha motifs resembling a three-quarter TIM barrel core (see PDOC00155 from PROSITEDOC) []. The N-terminal MTTase domain might form an additional [beta/alpha]2 TIM barrel unit []. ; GO: 0003824 catalytic activity, 0051539 4 iron, 4 sulfur cluster binding, 0009451 RNA modification
Probab=31.80 E-value=1.5e+02 Score=22.91 Aligned_cols=42 Identities=19% Similarity=0.232 Sum_probs=27.4
Q ss_pred CCCCccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcceEEE
Q 023323 95 HWKGADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFF 163 (284)
Q Consensus 95 ~w~~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vf~ 163 (284)
..+++|++|||| |. -...|=+++++.+.++...+ .++..|++
T Consensus 33 ~~e~AD~iiiNT------------------C~-------V~~~Ae~k~~~~i~~l~~~~--~~~~~ivv 74 (98)
T PF00919_consen 33 DPEEADVIIINT------------------CT-------VRESAEQKSRNRIRKLKKLK--KPGAKIVV 74 (98)
T ss_pred ccccCCEEEEEc------------------CC-------CCcHHHHHHHHHHHHHHHhc--CCCCEEEE
Confidence 336899999998 22 12457788888888877553 23445544
No 47
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=31.76 E-value=1.4e+02 Score=23.59 Aligned_cols=95 Identities=13% Similarity=0.164 Sum_probs=52.4
Q ss_pred CCccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCC
Q 023323 97 KGADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEW 176 (284)
Q Consensus 97 ~~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W 176 (284)
...|+|||+.|.= .. .. ++ ......+.|+..|+++++.+.. .+.|++=++.|.....+.+
T Consensus 60 ~~~d~vvi~~G~N---D~----~~-----~~---~~~~~~~~~~~~l~~~i~~~~~-----~~~vi~~~~~~~~~~~~~~ 119 (179)
T PF13472_consen 60 PKPDLVVISFGTN---DV----LN-----GD---ENDTSPEQYEQNLRRIIEQLRP-----HGPVILVSPPPRGPDPRDP 119 (179)
T ss_dssp TTCSEEEEE--HH---HH----CT-----CT---TCHHHHHHHHHHHHHHHHHHHT-----TSEEEEEE-SCSSSSTTTT
T ss_pred CCCCEEEEEcccc---cc----cc-----cc---cccccHHHHHHHHHHHHHhhcc-----cCcEEEecCCCcccccccc
Confidence 5789999998742 10 00 00 0012466788888888877733 2378888888777543221
Q ss_pred CCCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcCCCcceEEeecccccc
Q 023323 177 GGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLSS 230 (284)
Q Consensus 177 ~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdiT~ls~ 230 (284)
+ . . ........++++++++.++ ..+.++|+.....
T Consensus 120 -------~-------~-~--~~~~~~~~~~~~~~~~a~~--~~~~~id~~~~~~ 154 (179)
T PF13472_consen 120 -------K-------Q-D--YLNRRIDRYNQAIRELAKK--YGVPFIDLFDAFD 154 (179)
T ss_dssp -------H-------T-T--CHHHHHHHHHHHHHHHHHH--CTEEEEEHHHHHB
T ss_pred -------c-------c-h--hhhhhHHHHHHHHHHHHHH--cCCEEEECHHHHc
Confidence 1 0 0 0011123455666666553 3799999999854
No 48
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=31.73 E-value=23 Score=30.05 Aligned_cols=29 Identities=17% Similarity=0.518 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcceEEEEec
Q 023323 136 ENAYRMVMKSMLRWVKLNMDPKKTRVFFTSM 166 (284)
Q Consensus 136 ~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~ 166 (284)
.+.|++.++.+++.+.+. .+ +..|++-++
T Consensus 101 ~~~~~~~l~~~i~~ir~~-~p-~~~Ivv~~~ 129 (204)
T cd04506 101 EETYQNNLKKIFKEIRKL-NP-DAPIFLVGL 129 (204)
T ss_pred HHHHHHHHHHHHHHHHHH-CC-CCeEEEEec
Confidence 567999999999988552 22 455555554
No 49
>TIGR00670 asp_carb_tr aspartate carbamoyltransferase. Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.
Probab=31.20 E-value=39 Score=31.66 Aligned_cols=29 Identities=28% Similarity=0.342 Sum_probs=23.6
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.++|++|+||||-..-|-..||+=+++..
T Consensus 147 ~l~g~~va~vGD~~~~~v~~Sl~~~~a~~ 175 (301)
T TIGR00670 147 RLDGLKIALVGDLKYGRTVHSLAEALTRF 175 (301)
T ss_pred CCCCCEEEEEccCCCCcHHHHHHHHHHHc
Confidence 47899999999977568899988877643
No 50
>COG0621 MiaB 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]
Probab=31.06 E-value=2.1e+02 Score=28.44 Aligned_cols=41 Identities=22% Similarity=0.259 Sum_probs=26.9
Q ss_pred CCCCccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcceEEE
Q 023323 95 HWKGADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFF 163 (284)
Q Consensus 95 ~w~~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vf~ 163 (284)
...++||+|||| |. -...|=+++++.+.++...+ +..++++
T Consensus 37 ~~~eADvviiNT------------------C~-------V~~~a~~k~~~~i~~~~~~~---p~~~iiV 77 (437)
T COG0621 37 DPEEADVVIINT------------------CA-------VREKAEQKVRSAIGELKKLK---PDAKIIV 77 (437)
T ss_pred CcccCCEEEEec------------------Ce-------eeehHHHHHHHHHHHHHHhC---CCCEEEE
Confidence 345799999999 22 12456788888888876553 3445554
No 51
>PF01861 DUF43: Protein of unknown function DUF43; InterPro: IPR002723 This family of prokaryotic proteins have not been characterised. All the members are 350-400 amino acids long.; PDB: 2QM3_A.
Probab=30.95 E-value=24 Score=32.24 Aligned_cols=12 Identities=58% Similarity=1.243 Sum_probs=9.1
Q ss_pred ccCCceEEEecc
Q 023323 5 LRGKRMMFVGDS 16 (284)
Q Consensus 5 ~RgK~i~FVGDS 16 (284)
+.||+|.||||-
T Consensus 43 L~gk~il~lGDD 54 (243)
T PF01861_consen 43 LEGKRILFLGDD 54 (243)
T ss_dssp STT-EEEEES-T
T ss_pred ccCCEEEEEcCC
Confidence 789999999995
No 52
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=30.08 E-value=27 Score=29.63 Aligned_cols=93 Identities=6% Similarity=0.065 Sum_probs=50.7
Q ss_pred CCccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCC
Q 023323 97 KGADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEW 176 (284)
Q Consensus 97 ~~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W 176 (284)
...|+|||..|.-=... +.. . . -...+.|+..|+++++.+.+. +..+++=|..|. . .|
T Consensus 64 ~~pdlVii~~G~ND~~~-------~~~---~---~-~~~~~~~~~nl~~ii~~~~~~----~~~~il~tp~~~--~--~~ 121 (198)
T cd01821 64 KPGDYVLIQFGHNDQKP-------KDP---E---Y-TEPYTTYKEYLRRYIAEARAK----GATPILVTPVTR--R--TF 121 (198)
T ss_pred CCCCEEEEECCCCCCCC-------CCC---C---C-CCcHHHHHHHHHHHHHHHHHC----CCeEEEECCccc--c--cc
Confidence 46899999998541100 000 0 0 123677999999999887552 345666444432 1 12
Q ss_pred CCCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcCCCcceEEeeccccc
Q 023323 177 GGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLS 229 (284)
Q Consensus 177 ~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdiT~ls 229 (284)
+. + . .. .......+++++++.++. .+.++|+..+.
T Consensus 122 ~~-----~-~---~~-------~~~~~~~~~~~~~~a~~~--~~~~vD~~~~~ 156 (198)
T cd01821 122 DE-----G-G---KV-------EDTLGDYPAAMRELAAEE--GVPLIDLNAAS 156 (198)
T ss_pred CC-----C-C---cc-------cccchhHHHHHHHHHHHh--CCCEEecHHHH
Confidence 21 1 0 00 011234566777766544 47889988764
No 53
>PRK14804 ornithine carbamoyltransferase; Provisional
Probab=28.31 E-value=45 Score=31.41 Aligned_cols=26 Identities=15% Similarity=0.321 Sum_probs=21.5
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHR 31 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~ 31 (284)
.+.|++|+|||| .-|-..||+=+++.
T Consensus 150 ~l~g~~va~vGd--~~rv~~Sl~~~~~~ 175 (311)
T PRK14804 150 PLNQKQLTYIGV--HNNVVNSLIGITAA 175 (311)
T ss_pred CCCCCEEEEECC--CCcHHHHHHHHHHH
Confidence 478999999999 45788998888764
No 54
>PHA03298 envelope glycoprotein L; Provisional
Probab=28.11 E-value=28 Score=28.88 Aligned_cols=21 Identities=33% Similarity=0.461 Sum_probs=17.2
Q ss_pred EEEeccccc-----hhHHHHhhhhhc
Q 023323 11 MFVGDSLNR-----GQYISMVCLLHR 31 (284)
Q Consensus 11 ~FVGDSl~R-----Nq~eSLlClL~~ 31 (284)
|-.-||++| .|..||-||-+-
T Consensus 35 a~a~dsigrlidgaeqlvsmrcmtsf 60 (167)
T PHA03298 35 AAACDSIGRLIDGAEQLVSMRCMTSF 60 (167)
T ss_pred hccccccccccccHHHHhhhhhhccc
Confidence 345699999 899999999763
No 55
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=28.04 E-value=28 Score=28.68 Aligned_cols=68 Identities=10% Similarity=0.267 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcC
Q 023323 136 ENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWGGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGN 215 (284)
Q Consensus 136 ~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (284)
.+.|+..++++++.+.+.. .+..+++-+..|. .. .|+. .....++++++++...+
T Consensus 69 ~~~~~~~~~~lv~~i~~~~--~~~~iil~~~~p~-~~--~~~~--------------------~~~~~~~n~~~~~~a~~ 123 (171)
T cd04502 69 PEEVLRDFRELVNRIRAKL--PDTPIAIISIKPS-PA--RWAL--------------------RPKIRRFNALLKELAET 123 (171)
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCcEEEEEecCC-Cc--chhh--------------------HHHHHHHHHHHHHHHhc
Confidence 6678888888888886543 2456777676553 11 1110 00123456666665542
Q ss_pred CCcceEEeeccccc
Q 023323 216 SKFPITFLNITQLS 229 (284)
Q Consensus 216 ~~~~v~lLdiT~ls 229 (284)
...+.++|+....
T Consensus 124 -~~~v~~vD~~~~~ 136 (171)
T cd04502 124 -RPNLTYIDVASPM 136 (171)
T ss_pred -CCCeEEEECcHHH
Confidence 2469999988643
No 56
>PRK10113 cell division modulator; Provisional
Probab=26.10 E-value=38 Score=24.85 Aligned_cols=16 Identities=56% Similarity=0.887 Sum_probs=13.3
Q ss_pred cccCCceEEE--eccccc
Q 023323 4 TLRGKRMMFV--GDSLNR 19 (284)
Q Consensus 4 ~~RgK~i~FV--GDSl~R 19 (284)
.||||-+||| |||.-|
T Consensus 38 ~LrGKYVAFvl~ge~FrR 55 (80)
T PRK10113 38 MLRGKYVAFVLMGESFLR 55 (80)
T ss_pred eeccceEEEEEechhhcc
Confidence 4899999997 888777
No 57
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=26.03 E-value=30 Score=28.23 Aligned_cols=26 Identities=4% Similarity=0.018 Sum_probs=16.8
Q ss_pred HHHHHHHHHhcCCCcceEEeecccccc
Q 023323 204 RIMQVIGEVFGNSKFPITFLNITQLSS 230 (284)
Q Consensus 204 ~~~~~~~~~~~~~~~~v~lLdiT~ls~ 230 (284)
+.+++++++.++. ..+.++|....+.
T Consensus 96 ~~n~~~~~~a~~~-~~v~~id~~~~~~ 121 (150)
T cd01840 96 DVNAYLLDAAKKY-KNVTIIDWYKAAK 121 (150)
T ss_pred HHHHHHHHHHHHC-CCcEEecHHHHhc
Confidence 4566666665443 3699999876543
No 58
>PRK02255 putrescine carbamoyltransferase; Provisional
Probab=24.00 E-value=60 Score=30.98 Aligned_cols=26 Identities=23% Similarity=0.516 Sum_probs=21.3
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHR 31 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~ 31 (284)
.+.|++|+||||- .|-..||+-+|+.
T Consensus 151 ~l~glkv~~vGD~--~~v~~Sl~~~~~~ 176 (338)
T PRK02255 151 KLEDCKVVFVGDA--TQVCVSLMFIATK 176 (338)
T ss_pred CCCCCEEEEECCC--chHHHHHHHHHHh
Confidence 3789999999994 3789999888764
No 59
>PF15590 Imm15: Immunity protein 15
Probab=23.58 E-value=82 Score=23.13 Aligned_cols=23 Identities=26% Similarity=0.358 Sum_probs=19.1
Q ss_pred hhCCCCcceEEEEecCCCCCCCC
Q 023323 152 LNMDPKKTRVFFTSMSPTHAKSI 174 (284)
Q Consensus 152 ~~~~~~~~~vf~Rt~sP~Hf~~g 174 (284)
.-.|+..++-..+++.++|++||
T Consensus 28 ~y~DP~D~r~W~~~~~~s~~hGG 50 (69)
T PF15590_consen 28 LYQDPRDGRYWEKSYPESHMHGG 50 (69)
T ss_pred hccCCCCCceeEEecCcccccCC
Confidence 33578889999999999999874
No 60
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=23.22 E-value=45 Score=26.14 Aligned_cols=18 Identities=22% Similarity=0.551 Sum_probs=13.5
Q ss_pred cccccCCceEEEeccccc
Q 023323 2 LETLRGKRMMFVGDSLNR 19 (284)
Q Consensus 2 L~~~RgK~i~FVGDSl~R 19 (284)
|+..-+++.++||||=..
T Consensus 59 ~~~fP~~kfiLIGDsgq~ 76 (100)
T PF09949_consen 59 LRDFPERKFILIGDSGQH 76 (100)
T ss_pred HHHCCCCcEEEEeeCCCc
Confidence 345567899999999544
No 61
>PRK13376 pyrB bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit; Provisional
Probab=22.49 E-value=67 Score=32.69 Aligned_cols=27 Identities=26% Similarity=0.113 Sum_probs=21.3
Q ss_pred cccCCceEEEeccccchhHHHHhhhhh
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLH 30 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~ 30 (284)
.++|++||||||-..-|-.-||+-+|+
T Consensus 171 ~l~glkVa~vGD~~~~rva~Sl~~~l~ 197 (525)
T PRK13376 171 DNSFIHIALVGDLLHGRTVHSKVNGLK 197 (525)
T ss_pred CcCCCEEEEECCCCCCcHHHHHHHHHH
Confidence 478999999999865567778777765
No 62
>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
Probab=21.50 E-value=47 Score=33.10 Aligned_cols=30 Identities=37% Similarity=0.619 Sum_probs=24.3
Q ss_pred ccccCCceEEEeccccchh-HHHHhhhhhcc
Q 023323 3 ETLRGKRMMFVGDSLNRGQ-YISMVCLLHRL 32 (284)
Q Consensus 3 ~~~RgK~i~FVGDSl~RNq-~eSLlClL~~~ 32 (284)
+.++|||++.|=|||=|-- ..-++-||+.+
T Consensus 344 ~~v~GKrVvlVDDSIVRGTTsr~IV~mlReA 374 (470)
T COG0034 344 EVVKGKRVVLVDDSIVRGTTSRRIVQMLREA 374 (470)
T ss_pred HHhCCCeEEEEccccccCccHHHHHHHHHHh
Confidence 3578999999999999854 66777777765
Done!