Query 023323
Match_columns 284
No_of_seqs 134 out of 715
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 04:53:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023323.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023323hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hp4_A GDSL-esterase; psychrot 80.9 0.64 2.2E-05 37.3 1.9 49 98-169 66-115 (185)
2 4hf7_A Putative acylhydrolase; 75.9 0.68 2.3E-05 38.6 0.6 31 136-170 100-130 (209)
3 3rjt_A Lipolytic protein G-D-S 72.0 1.1 3.9E-05 36.3 1.0 27 135-165 111-137 (216)
4 3mil_A Isoamyl acetate-hydroly 66.9 1.4 4.9E-05 36.5 0.6 54 97-169 71-124 (240)
5 1ivn_A Thioesterase I; hydrola 65.7 1.5 5.1E-05 35.4 0.4 59 136-226 81-140 (190)
6 4h08_A Putative hydrolase; GDS 64.5 12 0.0004 30.2 5.8 92 97-230 73-164 (200)
7 3dc7_A Putative uncharacterize 63.0 3 0.0001 34.8 1.8 106 97-231 81-186 (232)
8 1yzf_A Lipase/acylhydrolase; s 62.5 1.8 6E-05 34.5 0.3 89 97-230 66-154 (195)
9 3q98_A Transcarbamylase; rossm 62.0 4.8 0.00016 38.0 3.2 30 3-32 187-221 (399)
10 3bzw_A Putative lipase; protei 61.0 3.5 0.00012 35.7 1.9 81 137-230 141-221 (274)
11 2q0q_A ARYL esterase; SGNH hyd 58.5 2.3 7.8E-05 34.8 0.3 32 136-167 104-140 (216)
12 2yfk_A Aspartate/ornithine car 57.0 6.8 0.00023 37.2 3.3 29 4-32 185-218 (418)
13 3grf_A Ornithine carbamoyltran 55.1 6 0.00021 36.3 2.6 28 4-32 158-185 (328)
14 2hsj_A Putative platelet activ 55.1 3.8 0.00013 33.4 1.1 77 136-230 104-180 (214)
15 3dci_A Arylesterase; SGNH_hydr 55.0 2.8 9.6E-05 35.2 0.3 33 136-168 122-157 (232)
16 3p94_A GDSL-like lipase; serin 54.6 3.1 0.00011 33.5 0.5 70 136-229 96-165 (204)
17 3tpf_A Otcase, ornithine carba 54.4 6.7 0.00023 35.6 2.7 27 4-32 142-169 (307)
18 4f2g_A Otcase 1, ornithine car 54.0 6.5 0.00022 35.8 2.6 27 4-32 151-177 (309)
19 1vjg_A Putative lipase from th 52.6 2.8 9.4E-05 34.6 -0.2 91 98-230 88-178 (218)
20 4h08_A Putative hydrolase; GDS 51.4 6 0.00021 32.0 1.8 12 9-20 22-33 (200)
21 3r7f_A Aspartate carbamoyltran 49.4 8.9 0.0003 34.8 2.7 29 4-32 144-172 (304)
22 1fxw_F Alpha2, platelet-activa 48.6 5.5 0.00019 33.3 1.1 86 98-229 94-179 (229)
23 4amu_A Ornithine carbamoyltran 48.2 9.2 0.00031 35.6 2.6 28 4-32 177-204 (365)
24 3sds_A Ornithine carbamoyltran 47.8 9.6 0.00033 35.3 2.7 26 5-32 186-211 (353)
25 1es9_A PAF-AH, platelet-activa 46.4 6.2 0.00021 32.9 1.1 87 98-230 93-179 (232)
26 2vpt_A Lipolytic enzyme; ester 45.6 4.4 0.00015 33.4 0.0 13 8-20 6-18 (215)
27 2waa_A Acetyl esterase, xylan 45.4 6.5 0.00022 35.6 1.1 28 136-165 245-272 (347)
28 1fll_X B-cell surface antigen 43.8 12 0.00042 21.1 1.7 11 258-268 6-16 (26)
29 4ep1_A Otcase, ornithine carba 42.8 12 0.00042 34.4 2.6 27 4-32 176-202 (340)
30 2w9x_A AXE2A, CJCE2B, putative 42.8 7.3 0.00025 35.6 1.0 76 136-241 266-341 (366)
31 1vcc_A DNA topoisomerase I; DN 42.4 7 0.00024 27.9 0.6 15 8-22 55-70 (77)
32 3csu_A Protein (aspartate carb 42.3 13 0.00045 33.7 2.7 29 4-32 151-179 (310)
33 3gd5_A Otcase, ornithine carba 42.2 13 0.00044 34.0 2.6 26 4-31 154-179 (323)
34 1pg5_A Aspartate carbamoyltran 40.8 17 0.00058 32.8 3.1 29 4-32 146-174 (299)
35 2wao_A Endoglucanase E; plant 40.3 7 0.00024 35.2 0.5 28 136-165 233-260 (341)
36 1oth_A Protein (ornithine tran 40.2 13 0.00046 33.8 2.4 27 4-32 152-178 (321)
37 4a8t_A Putrescine carbamoyltra 40.1 13 0.00045 34.2 2.3 27 4-32 172-198 (339)
38 4ekn_B Aspartate carbamoyltran 39.9 15 0.00052 33.2 2.7 29 4-32 148-176 (306)
39 3skv_A SSFX3; jelly roll, GDSL 38.9 11 0.00039 35.0 1.7 30 137-168 264-293 (385)
40 4a8p_A Putrescine carbamoyltra 37.8 15 0.00051 34.1 2.3 27 4-32 150-176 (355)
41 2o14_A Hypothetical protein YX 36.4 13 0.00046 34.1 1.7 26 136-165 251-276 (375)
42 4h31_A Otcase, ornithine carba 33.8 19 0.00065 33.3 2.3 28 4-32 178-205 (358)
43 1vlv_A Otcase, ornithine carba 33.7 21 0.00073 32.6 2.6 28 4-32 164-191 (325)
44 1k7c_A Rhamnogalacturonan acet 32.2 15 0.0005 30.9 1.2 66 137-229 108-173 (233)
45 1ml4_A Aspartate transcarbamoy 30.3 25 0.00084 31.9 2.4 29 4-32 152-180 (308)
46 2ef0_A Ornithine carbamoyltran 28.4 29 0.001 31.2 2.6 27 4-32 151-177 (301)
47 3r6w_A FMN-dependent NADH-azor 27.5 21 0.00073 29.5 1.4 22 91-112 80-101 (212)
48 1pvv_A Otcase, ornithine carba 26.9 32 0.0011 31.2 2.6 27 4-32 152-178 (315)
49 3t6g_B Breast cancer anti-estr 25.9 3.8 0.00013 35.6 -3.6 16 5-20 144-159 (229)
50 3d6n_B Aspartate carbamoyltran 25.6 37 0.0013 30.4 2.7 29 4-32 143-171 (291)
51 1dxh_A Ornithine carbamoyltran 25.5 33 0.0011 31.4 2.3 28 4-32 152-179 (335)
52 2i6u_A Otcase, ornithine carba 24.2 39 0.0013 30.5 2.6 28 4-32 145-172 (307)
53 1duv_G Octase-1, ornithine tra 24.1 39 0.0013 30.9 2.6 28 4-32 152-179 (333)
54 2w37_A Ornithine carbamoyltran 24.0 40 0.0014 31.2 2.6 28 4-32 173-200 (359)
55 1oeg_A Apolipoprotein E; siali 22.7 30 0.001 19.8 0.9 16 18-33 6-21 (26)
56 4fe3_A Cytosolic 5'-nucleotida 21.6 35 0.0012 29.5 1.7 14 6-19 229-242 (297)
No 1
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=80.95 E-value=0.64 Score=37.29 Aligned_cols=49 Identities=6% Similarity=0.035 Sum_probs=30.6
Q ss_pred CccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcceEEEEec-CCC
Q 023323 98 GADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSM-SPT 169 (284)
Q Consensus 98 ~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~-sP~ 169 (284)
..|++||..|.-=. ..+ ...+.|+..++.+++.+.+. ...|++-++ .|.
T Consensus 66 ~pd~vvi~~G~ND~-------~~~------------~~~~~~~~~~~~~i~~~~~~----~~~vvl~~~~~p~ 115 (185)
T 3hp4_A 66 EPTHVLIELGANDG-------LRG------------FPVKKMQTNLTALVKKSQAA----NAMTALMEIYIPP 115 (185)
T ss_dssp CCSEEEEECCHHHH-------HTT------------CCHHHHHHHHHHHHHHHHHT----TCEEEEECCCCCS
T ss_pred CCCEEEEEeecccC-------CCC------------cCHHHHHHHHHHHHHHHHHc----CCeEEEEeCCCCC
Confidence 67999999885210 000 12577899999999888663 345555443 444
No 2
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=75.94 E-value=0.68 Score=38.58 Aligned_cols=31 Identities=29% Similarity=0.282 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCC
Q 023323 136 ENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTH 170 (284)
Q Consensus 136 ~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~H 170 (284)
.+.+..-++++++.+.+ .++.|++-|..|..
T Consensus 100 ~~~~~~~l~~ii~~~~~----~~~~iil~~~~P~~ 130 (209)
T 4hf7_A 100 EDYTFGNIASMAELAKA----NKIKVILTSVLPAA 130 (209)
T ss_dssp HHHHHHHHHHHHHHHHH----TTCEEEEECCCCCS
T ss_pred HHHHHHHHHHhhHHHhc----cCceEEEEeeeccC
Confidence 45566667777766543 35678888888854
No 3
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=71.95 E-value=1.1 Score=36.35 Aligned_cols=27 Identities=19% Similarity=0.309 Sum_probs=19.8
Q ss_pred hHHHHHHHHHHHHHHHHhhCCCCcceEEEEe
Q 023323 135 TENAYRMVMKSMLRWVKLNMDPKKTRVFFTS 165 (284)
Q Consensus 135 ~~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt 165 (284)
..+.|+..++.+++.+.+. ...+++-|
T Consensus 111 ~~~~~~~~l~~~i~~~~~~----~~~vil~~ 137 (216)
T 3rjt_A 111 GIDEYRDTLRHLVATTKPR----VREMFLLS 137 (216)
T ss_dssp CHHHHHHHHHHHHHHHGGG----SSEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHhc----CCeEEEEC
Confidence 3678999999999888553 45666655
No 4
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=66.92 E-value=1.4 Score=36.54 Aligned_cols=54 Identities=7% Similarity=-0.103 Sum_probs=33.3
Q ss_pred CCccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCC
Q 023323 97 KGADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPT 169 (284)
Q Consensus 97 ~~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~ 169 (284)
...|++||..|.==.. . .+ .. ....+.|+..++.+++.+.+. ...|++-+..|.
T Consensus 71 ~~pd~vvi~~G~ND~~-----~-~~--------~~-~~~~~~~~~~l~~~i~~~~~~----~~~vil~~~~p~ 124 (240)
T 3mil_A 71 SNIVMATIFLGANDAC-----S-AG--------PQ-SVPLPEFIDNIRQMVSLMKSY----HIRPIIIGPGLV 124 (240)
T ss_dssp CCEEEEEEECCTTTTS-----S-SS--------TT-CCCHHHHHHHHHHHHHHHHHT----TCEEEEECCCCC
T ss_pred CCCCEEEEEeecCcCC-----c-cC--------CC-CCCHHHHHHHHHHHHHHHHHc----CCeEEEEcCCCC
Confidence 4689999998852110 0 00 00 123677888899998888663 347777776553
No 5
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=65.74 E-value=1.5 Score=35.43 Aligned_cols=59 Identities=10% Similarity=0.203 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcceEEEEec-CCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhc
Q 023323 136 ENAYRMVMKSMLRWVKLNMDPKKTRVFFTSM-SPTHAKSIEWGGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFG 214 (284)
Q Consensus 136 ~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~-sP~Hf~~g~W~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~ 214 (284)
.+.|+..++.+++.+.+. ...+++-+. .|..+ + . .....++++++++.+
T Consensus 81 ~~~~~~~l~~li~~~~~~----~~~vil~~~~~p~~~---------~-----~------------~~~~~~n~~~~~~a~ 130 (190)
T 1ivn_A 81 PQQTEQTLRQILQDVKAA----NAEPLLMQIRLPANY---------G-----R------------RYNEAFSAIYPKLAK 130 (190)
T ss_dssp HHHHHHHHHHHHHHHHHT----TCEEEEECCCCCGGG---------C-----H------------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc----CCCEEEEeccCCcch---------h-----H------------HHHHHHHHHHHHHHH
Confidence 567888899998888663 245666554 34321 1 0 012345666666655
Q ss_pred CCCcceEEeecc
Q 023323 215 NSKFPITFLNIT 226 (284)
Q Consensus 215 ~~~~~v~lLdiT 226 (284)
+. .+.++|+.
T Consensus 131 ~~--~v~~iD~~ 140 (190)
T 1ivn_A 131 EF--DVPLLPFF 140 (190)
T ss_dssp HT--TCCEECCT
T ss_pred Hc--CCeEEccH
Confidence 43 58899985
No 6
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=64.45 E-value=12 Score=30.22 Aligned_cols=92 Identities=13% Similarity=0.161 Sum_probs=53.9
Q ss_pred CCccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCC
Q 023323 97 KGADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEW 176 (284)
Q Consensus 97 ~~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W 176 (284)
...|++||+.|..= . ....+.|+..++.+++.+.+. ..+..+++-+..|-... .+
T Consensus 73 ~~pd~Vvi~~G~ND-----~----------------~~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~~~--~~ 127 (200)
T 4h08_A 73 TKFDVIHFNNGLHG-----F----------------DYTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVRTG--EG 127 (200)
T ss_dssp SCCSEEEECCCSSC-----T----------------TSCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCEES--GG
T ss_pred CCCCeEEEEeeeCC-----C----------------CCCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCccc--cc
Confidence 35799999988541 0 012567888999998888653 23567888888875432 11
Q ss_pred CCCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcCCCcceEEeecccccc
Q 023323 177 GGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLSS 230 (284)
Q Consensus 177 ~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdiT~ls~ 230 (284)
. ....+ ......+.+++++++.++. .+.++|+...+.
T Consensus 128 ~-----~~~~~----------~~~~~~~~n~~~~~~a~~~--~v~~iD~~~~~~ 164 (200)
T 4h08_A 128 M-----KEFAP----------ITERLNVRNQIALKHINRA--SIEVNDLWKVVI 164 (200)
T ss_dssp G-----CEECT----------HHHHHHHHHHHHHHHHHHT--TCEEECHHHHHT
T ss_pred c-----cccch----------hHHHHHHHHHHHHHHhhhc--ceEEEecHHhHh
Confidence 1 01000 0011234456666665543 588999876654
No 7
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=63.00 E-value=3 Score=34.76 Aligned_cols=106 Identities=12% Similarity=0.144 Sum_probs=51.0
Q ss_pred CCccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCC
Q 023323 97 KGADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEW 176 (284)
Q Consensus 97 ~~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W 176 (284)
...|++||..|.-=.... ...+.+ .. ...+.|+..++.+++.+.+.. | .+.|++- +|-... ..|
T Consensus 81 ~~pd~Vii~~G~ND~~~~---~~~~~~-------~~-~~~~~f~~~l~~li~~l~~~~-P-~~~iil~--~p~~~~-~~~ 144 (232)
T 3dc7_A 81 EDADFIAVFGGVNDYGRD---QPLGQY-------GD-CDMTTFYGALMMLLTGLQTNW-P-TVPKLFI--SAIHIG-SDF 144 (232)
T ss_dssp TTCSEEEEECCHHHHHTT---CCCCCT-------TC-CSTTSHHHHHHHHHHHHHHHC-T-TSCEEEE--ECCCCC-SCS
T ss_pred CCCCEEEEEEeccccccC---cCCccc-------cc-cchHHHHHHHHHHHHHHHHhC-C-CCeEEEE--eCcccC-Ccc
Confidence 368999999986411000 000000 00 113356777777777776542 2 3556663 444431 122
Q ss_pred CCCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcCCCcceEEeeccccccc
Q 023323 177 GGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLSSY 231 (284)
Q Consensus 177 ~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdiT~ls~~ 231 (284)
.. ...-+. .. ......+.+++++++.++. .+.++|+...+..
T Consensus 145 ~~--------~~~~~~-~~--~~~~~~~~~~~i~~~a~~~--~v~~iD~~~~~~~ 186 (232)
T 3dc7_A 145 GG--------SFSAVT-NG--LGYRQSDYEAAIAQMTADY--GVPHLSLYRDAGM 186 (232)
T ss_dssp BT--------TBCSSC-CT--TSCCHHHHHHHHHHHHHHH--TCCEEEHHHHSSC
T ss_pred CC--------cccccc-cc--cchHHHHHHHHHHHHHHHc--CCcEEecccccCC
Confidence 11 000000 00 1112345666666665533 5889999887554
No 8
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=62.47 E-value=1.8 Score=34.53 Aligned_cols=89 Identities=11% Similarity=0.075 Sum_probs=49.1
Q ss_pred CCccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCC
Q 023323 97 KGADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEW 176 (284)
Q Consensus 97 ~~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W 176 (284)
...|++||..|.-=. .. + . -...+.|+..++.+++.+. ...+++-+..|... .|
T Consensus 66 ~~pd~vvi~~G~ND~-----~~--~----~------~~~~~~~~~~l~~~i~~~~------~~~vi~~~~~p~~~---~~ 119 (195)
T 1yzf_A 66 EKPDEVVIFFGANDA-----SL--D----R------NITVATFRENLETMIHEIG------SEKVILITPPYADS---GR 119 (195)
T ss_dssp GCCSEEEEECCTTTT-----CT--T----S------CCCHHHHHHHHHHHHHHHC------GGGEEEECCCCCCT---TT
T ss_pred cCCCEEEEEeecccc-----Cc--c----C------CCCHHHHHHHHHHHHHHhc------CCEEEEEcCCCCcc---cc
Confidence 367999999875211 00 0 0 1135678888888887663 45677777766431 11
Q ss_pred CCCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcCCCcceEEeecccccc
Q 023323 177 GGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLSS 230 (284)
Q Consensus 177 ~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdiT~ls~ 230 (284)
| . . .........+++++++.++. .+.++|+.....
T Consensus 120 -------~-~--------~-~~~~~~~~~n~~~~~~a~~~--~~~~iD~~~~~~ 154 (195)
T 1yzf_A 120 -------R-P--------E-RPQTRIKELVKVAQEVGAAH--NLPVIDLYKAMT 154 (195)
T ss_dssp -------C-T--------T-SCHHHHHHHHHHHHHHHHHT--TCCEECHHHHHH
T ss_pred -------c-h--------h-hhHHHHHHHHHHHHHHHHHh--CCeEEehHHHHh
Confidence 2 0 0 00111234556666655433 588999887643
No 9
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=62.02 E-value=4.8 Score=37.99 Aligned_cols=30 Identities=23% Similarity=0.432 Sum_probs=23.8
Q ss_pred ccccCCceEEEec---cccc--hhHHHHhhhhhcc
Q 023323 3 ETLRGKRMMFVGD---SLNR--GQYISMVCLLHRL 32 (284)
Q Consensus 3 ~~~RgK~i~FVGD---Sl~R--Nq~eSLlClL~~~ 32 (284)
+.++|++|+|||| |.+| |...||+.+++..
T Consensus 187 ~~l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~l 221 (399)
T 3q98_A 187 ENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRF 221 (399)
T ss_dssp GGGTTCEEEEECCCCSSCCCCTHHHHHHHHHHGGG
T ss_pred cccCCCEEEEEEecccccCcchHHHHHHHHHHHHc
Confidence 3478999999998 4466 7789999988754
No 10
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9
Probab=61.02 E-value=3.5 Score=35.68 Aligned_cols=81 Identities=15% Similarity=0.209 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcCC
Q 023323 137 NAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWGGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNS 216 (284)
Q Consensus 137 ~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (284)
+.|+..|+.+++.+.+.. +++.|++-| |-+.....|. | ..-.|...............+++++++.++
T Consensus 141 ~~~~~~l~~li~~lr~~~--p~a~Iilit--p~~~~~~~~~------~-~~~~p~~~~~~~~~~~~~~~n~~i~~~a~~- 208 (274)
T 3bzw_A 141 DTYRGRINIGITQLKKLF--PDKQIVLLT--PLHRSLANFG------D-KNVQPDESYQNGCGEYIDAYVQAIKEAGNI- 208 (274)
T ss_dssp SSHHHHHHHHHHHHHHHC--TTSEEEEEC--CCCCCCEECS------T-TEEECCTTBCCTTSCCHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHC--CCCeEEEEe--cccccccccc------c-cccCcccccchhhHHHHHHHHHHHHHHHHH-
Confidence 457777888887775542 246677744 4332211121 2 112233211000111234567777776654
Q ss_pred CcceEEeecccccc
Q 023323 217 KFPITFLNITQLSS 230 (284)
Q Consensus 217 ~~~v~lLdiT~ls~ 230 (284)
..+.++|+..++.
T Consensus 209 -~~v~~vD~~~~~~ 221 (274)
T 3bzw_A 209 -WGIPVIDFNAVTG 221 (274)
T ss_dssp -HTCCEECHHHHTC
T ss_pred -cCCCEEcchhhhc
Confidence 3489999998664
No 11
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=58.48 E-value=2.3 Score=34.78 Aligned_cols=32 Identities=13% Similarity=0.046 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHhhCC-----CCcceEEEEecC
Q 023323 136 ENAYRMVMKSMLRWVKLNMD-----PKKTRVFFTSMS 167 (284)
Q Consensus 136 ~~Ay~~al~t~~~~v~~~~~-----~~~~~vf~Rt~s 167 (284)
.+.|+..++.+++.+.+.-. .++.+|++-+..
T Consensus 104 ~~~~~~~l~~li~~~~~~~~~~~~~~P~~~iil~~~p 140 (216)
T 2q0q_A 104 PLDIALGMSVLVTQVLTSAGGVGTTYPAPKVLVVSPP 140 (216)
T ss_dssp HHHHHHHHHHHHHHHHTCTTTTTBCCCCCEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCeEEEEeCC
Confidence 56788999999988865320 024566666543
No 12
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=57.04 E-value=6.8 Score=37.20 Aligned_cols=29 Identities=28% Similarity=0.422 Sum_probs=24.2
Q ss_pred cccCCceEEEec---cccc--hhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGD---SLNR--GQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGD---Sl~R--Nq~eSLlClL~~~ 32 (284)
.++|++|++||| |.+| |...||+-+|+..
T Consensus 185 ~l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~l 218 (418)
T 2yfk_A 185 NLKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTRL 218 (418)
T ss_dssp GGTTCEEEEECCCCSSSCCCSHHHHHHHHHHGGG
T ss_pred ccCCCEEEEEeccccccCccchHHHHHHHHHHHc
Confidence 378999999998 4577 8999999998754
No 13
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=55.14 E-value=6 Score=36.29 Aligned_cols=28 Identities=21% Similarity=0.370 Sum_probs=24.1
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.+.|++|+||||-.+ |...||+-+|+..
T Consensus 158 ~l~gl~va~vGD~~~-~va~Sl~~~~~~~ 185 (328)
T 3grf_A 158 GFKGIKFAYCGDSMN-NVTYDLMRGCALL 185 (328)
T ss_dssp TGGGCCEEEESCCSS-HHHHHHHHHHHHH
T ss_pred ccCCcEEEEeCCCCc-chHHHHHHHHHHc
Confidence 688999999999766 7999999988754
No 14
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=55.12 E-value=3.8 Score=33.43 Aligned_cols=77 Identities=13% Similarity=0.166 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcC
Q 023323 136 ENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWGGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGN 215 (284)
Q Consensus 136 ~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (284)
.+.|+..++.+++.+.+.. ...+|++-+..|..... .|.. .|.. ........++++++++.++
T Consensus 104 ~~~~~~~l~~~i~~l~~~~--p~~~iil~~~~p~~~~~-~~~~----~~~~----------~~~~~~~~~n~~l~~~a~~ 166 (214)
T 2hsj_A 104 VNEALNNLEAIIQSVARDY--PLTEIKLLSILPVNERE-EYQQ----AVYI----------RSNEKIQNWNQAYQELASA 166 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHC--TTCEEEEECCCCCCCSG-GGHH----HHTT----------CCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhC--CCCeEEEEecCCCCccc-cccc----cccc----------ccHHHHHHHHHHHHHHHHH
Confidence 5678888888888886642 34678888887654311 1211 1100 0011123456667766654
Q ss_pred CCcceEEeecccccc
Q 023323 216 SKFPITFLNITQLSS 230 (284)
Q Consensus 216 ~~~~v~lLdiT~ls~ 230 (284)
. ..+.++|+.....
T Consensus 167 ~-~~~~~iD~~~~~~ 180 (214)
T 2hsj_A 167 Y-MQVEFVPVFDCLT 180 (214)
T ss_dssp C-TTEEEECCGGGSB
T ss_pred c-CCCEEEEhHHHHh
Confidence 3 2699999987543
No 15
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=54.98 E-value=2.8 Score=35.17 Aligned_cols=33 Identities=12% Similarity=0.144 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHhhCC---CCcceEEEEecCC
Q 023323 136 ENAYRMVMKSMLRWVKLNMD---PKKTRVFFTSMSP 168 (284)
Q Consensus 136 ~~Ay~~al~t~~~~v~~~~~---~~~~~vf~Rt~sP 168 (284)
.+.|+..++.+++.+.+... ...+.|++-+..|
T Consensus 122 ~~~~~~~l~~li~~ir~~~~~~~~p~~~iil~~p~~ 157 (232)
T 3dci_A 122 AEAAVSGMRRLAQIVETFIYKPREAVPKLLIVAPPP 157 (232)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSTTCCCEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCCCeEEEEeCCC
Confidence 56788999999988866321 0356666666444
No 16
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=54.58 E-value=3.1 Score=33.52 Aligned_cols=70 Identities=19% Similarity=0.189 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcC
Q 023323 136 ENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWGGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGN 215 (284)
Q Consensus 136 ~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (284)
.+.|+..++.+++.+.+ ....+++-+..|..-. .|.. . . ........++++++++.++
T Consensus 96 ~~~~~~~~~~~i~~~~~----~~~~vil~~~~p~~~~--~~~~--~----------~----~~~~~~~~~n~~l~~~a~~ 153 (204)
T 3p94_A 96 LENVFGNLVSMAELAKA----NHIKVIFCSVLPAYDF--PWRP--G----------M----QPADKVIQLNKWIKEYADK 153 (204)
T ss_dssp HHHHHHHHHHHHHHHHH----TTCEEEEECCCCCSCB--TTBT--T----------C----CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh----CCCeEEEEeCCCCCCC--CCCc--c----------c----cHHHHHHHHHHHHHHHHHH
Confidence 56788888888887755 2557788887765421 2321 0 0 0011123556666666554
Q ss_pred CCcceEEeeccccc
Q 023323 216 SKFPITFLNITQLS 229 (284)
Q Consensus 216 ~~~~v~lLdiT~ls 229 (284)
. .+.++|+....
T Consensus 154 ~--~v~~iD~~~~~ 165 (204)
T 3p94_A 154 N--GLTYVDYHSAM 165 (204)
T ss_dssp T--TCEEECHHHHH
T ss_pred c--CCcEEchhhhh
Confidence 3 58999998765
No 17
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=54.43 E-value=6.7 Score=35.62 Aligned_cols=27 Identities=19% Similarity=0.196 Sum_probs=22.6
Q ss_pred ccc-CCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLR-GKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~R-gK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.++ |++|+|||| .-|...||+.+++..
T Consensus 142 ~l~~gl~va~vGD--~~~va~Sl~~~~~~~ 169 (307)
T 3tpf_A 142 MQNGIAKVAFIGD--SNNMCNSWLITAAIL 169 (307)
T ss_dssp CGGGCCEEEEESC--SSHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEcC--CCccHHHHHHHHHHc
Confidence 467 999999999 357999999988754
No 18
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=54.05 E-value=6.5 Score=35.76 Aligned_cols=27 Identities=26% Similarity=0.464 Sum_probs=22.8
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.+.|++|+||||- -|-..||+.+|+..
T Consensus 151 ~l~glkva~vGD~--~~va~Sl~~~~~~~ 177 (309)
T 4f2g_A 151 PIRGKTVAWVGDA--NNMLYTWIQAARIL 177 (309)
T ss_dssp CCTTCEEEEESCC--CHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCC--cchHHHHHHHHHHc
Confidence 4789999999993 56999999988754
No 19
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=52.56 E-value=2.8 Score=34.60 Aligned_cols=91 Identities=14% Similarity=0.080 Sum_probs=50.1
Q ss_pred CccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCCC
Q 023323 98 GADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWG 177 (284)
Q Consensus 98 ~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~ 177 (284)
..|++||..|.= .. ... .+ ..-...+.|+..++.+++.+.+. ..|++-+..|.-..
T Consensus 88 ~pd~vvi~~G~N---D~-~~~-~~---------~~~~~~~~~~~~l~~li~~l~~~-----~~iil~~~~p~~~~----- 143 (218)
T 1vjg_A 88 YNSLVVFSFGLN---DT-TLE-NG---------KPRVSIAETIKNTREILTQAKKL-----YPVLMISPAPYIEQ----- 143 (218)
T ss_dssp SEEEEEEECCHH---HH-CEE-TT---------EESSCHHHHHHHHHHHHHHHHHH-----SCEEEECCCCCCCT-----
T ss_pred CCCEEEEEecCC---cc-hhh-cc---------cccCCHHHHHHHHHHHHHHHHHh-----CcEEEECCCCcccc-----
Confidence 679999998852 10 000 00 00123567888888888888664 45777676543210
Q ss_pred CCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcCCCcceEEeecccccc
Q 023323 178 GEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLSS 230 (284)
Q Consensus 178 ~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdiT~ls~ 230 (284)
.+ . + ......+++++++++.++ ..+.++|+.....
T Consensus 144 -----~~-~---~-------~~~~~~~~n~~l~~~a~~--~~v~~iD~~~~~~ 178 (218)
T 1vjg_A 144 -----QD-P---G-------RRRRTIDLSQQLALVCQD--LDVPYLDVFPLLE 178 (218)
T ss_dssp -----TC-T---T-------HHHHHHHHHHHHHHHHHH--HTCCEECCTGGGS
T ss_pred -----cc-c---h-------HHHHHHHHHHHHHHHHHH--cCCcEEehHHhhc
Confidence 01 0 0 001123455666665543 3689999987654
No 20
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=51.45 E-value=6 Score=32.03 Aligned_cols=12 Identities=33% Similarity=0.991 Sum_probs=10.8
Q ss_pred ceEEEeccccch
Q 023323 9 RMMFVGDSLNRG 20 (284)
Q Consensus 9 ~i~FVGDSl~RN 20 (284)
||+|+||||+.-
T Consensus 22 rVl~iGDSit~G 33 (200)
T 4h08_A 22 HVLLIGNSITRG 33 (200)
T ss_dssp EEEEEESHHHHH
T ss_pred eEEEEchhHHhh
Confidence 799999999965
No 21
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=49.36 E-value=8.9 Score=34.78 Aligned_cols=29 Identities=28% Similarity=0.269 Sum_probs=24.5
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.++|++|+||||-..-|...||+.+++..
T Consensus 144 ~l~glkva~vGD~~~~rva~Sl~~~~~~~ 172 (304)
T 3r7f_A 144 TFKGLTVSIHGDIKHSRVARSNAEVLTRL 172 (304)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHHT
T ss_pred CCCCCEEEEEcCCCCcchHHHHHHHHHHc
Confidence 47899999999976667999999888754
No 22
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=48.61 E-value=5.5 Score=33.26 Aligned_cols=86 Identities=8% Similarity=0.117 Sum_probs=49.7
Q ss_pred CccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCCC
Q 023323 98 GADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWG 177 (284)
Q Consensus 98 ~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~ 177 (284)
..|++||..|.-=. | ...+.|...++.+++.+.+.. ....|++-+..|....
T Consensus 94 ~pd~vvi~~G~ND~---------~------------~~~~~~~~~l~~~i~~l~~~~--p~~~iil~~~~p~~~~----- 145 (229)
T 1fxw_F 94 KPKVIVVWVGTNNH---------E------------NTAEEVAGGIEAIVQLINTRQ--PQAKIIVLGLLPRGEK----- 145 (229)
T ss_dssp CCSEEEEECCTTCT---------T------------SCHHHHHHHHHHHHHHHHHHC--TTCEEEEECCCCCSSS-----
T ss_pred CCCEEEEEEecCCC---------C------------CCHHHHHHHHHHHHHHHHHHC--CCCeEEEEeCCCCCCc-----
Confidence 56999998764311 1 125668888888888886542 2466777676654310
Q ss_pred CCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcCCCcceEEeeccccc
Q 023323 178 GEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLS 229 (284)
Q Consensus 178 ~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdiT~ls 229 (284)
.. ++ ......+++++++..++ ...+.++|+....
T Consensus 146 --------~~--~~-------~~~~~~~n~~l~~~a~~-~~~v~~iD~~~~~ 179 (229)
T 1fxw_F 146 --------PN--PL-------RQKNAKVNQLLKVSLPK-LANVQLLDTDGGF 179 (229)
T ss_dssp --------CC--HH-------HHHHHHHHHHHHHHSSS-SSSEEEECCCCSC
T ss_pred --------hh--hH-------HHHHHHHHHHHHHHHhc-CCCeEEEeCHHHh
Confidence 00 10 01123455556555432 3579999998754
No 23
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=48.21 E-value=9.2 Score=35.62 Aligned_cols=28 Identities=25% Similarity=0.315 Sum_probs=23.4
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.++|++|+||||-.+ |...||+-+++..
T Consensus 177 ~l~glkva~vGD~~n-nva~Sl~~~~~~l 204 (365)
T 4amu_A 177 NLKNKKIVFIGDYKN-NVGVSTMIGAAFN 204 (365)
T ss_dssp SCTTCEEEEESSTTS-HHHHHHHHHHHHT
T ss_pred CCCCCEEEEECCCCc-chHHHHHHHHHHc
Confidence 478999999999766 6899999888743
No 24
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=47.82 E-value=9.6 Score=35.32 Aligned_cols=26 Identities=19% Similarity=0.489 Sum_probs=22.2
Q ss_pred ccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 5 LRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 5 ~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
+.|++|+||||- .|-..||+-+|+..
T Consensus 186 l~glkva~vGD~--~nva~Sl~~~l~~l 211 (353)
T 3sds_A 186 LEGLKIAWVGDA--NNVLFDLAIAATKM 211 (353)
T ss_dssp CTTCEEEEESCC--CHHHHHHHHHHHHT
T ss_pred cCCCEEEEECCC--chHHHHHHHHHHHc
Confidence 589999999997 47999999888754
No 25
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=46.40 E-value=6.2 Score=32.85 Aligned_cols=87 Identities=14% Similarity=0.147 Sum_probs=51.1
Q ss_pred CccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCCC
Q 023323 98 GADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWG 177 (284)
Q Consensus 98 ~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~ 177 (284)
..|++||..|.-= .. ...+.|...++.+++.+.+.. ..++|++-+..|.-..
T Consensus 93 ~pd~vvi~~G~ND-----------~~----------~~~~~~~~~l~~~i~~l~~~~--p~~~ii~~~~~p~~~~----- 144 (232)
T 1es9_A 93 RPKIVVVWVGTNN-----------HG----------HTAEQVTGGIKAIVQLVNERQ--PQARVVVLGLLPRGQH----- 144 (232)
T ss_dssp CCSEEEEECCTTC-----------TT----------SCHHHHHHHHHHHHHHHHHHS--TTCEEEEECCCCCSSS-----
T ss_pred CCCEEEEEeecCC-----------CC----------CCHHHHHHHHHHHHHHHHHHC--CCCeEEEecCCCCCCC-----
Confidence 5799999886421 00 125667888888888886642 3567888887763210
Q ss_pred CCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcCCCcceEEeecccccc
Q 023323 178 GEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLSS 230 (284)
Q Consensus 178 ~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdiT~ls~ 230 (284)
. .++ ......+++++++.+.+ ...+.++|+.....
T Consensus 145 --------~--~~~-------~~~~~~~n~~l~~~~a~-~~~v~~iD~~~~~~ 179 (232)
T 1es9_A 145 --------P--NPL-------REKNRRVNELVRAALAG-HPRAHFLDADPGFV 179 (232)
T ss_dssp --------C--CHH-------HHHHHHHHHHHHHHHHS-CTTEEEECCCCCCS
T ss_pred --------c--hhH-------HHHHHHHHHHHHHHHhh-cCCCEEEeChHHhc
Confidence 0 011 01123456666663322 35699999987643
No 26
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=45.56 E-value=4.4 Score=33.43 Aligned_cols=13 Identities=46% Similarity=0.680 Sum_probs=11.2
Q ss_pred CceEEEeccccch
Q 023323 8 KRMMFVGDSLNRG 20 (284)
Q Consensus 8 K~i~FVGDSl~RN 20 (284)
.+|+|+||||+..
T Consensus 6 ~~i~~~GDSit~G 18 (215)
T 2vpt_A 6 IKIMPVGDSCTEG 18 (215)
T ss_dssp EEEEEEESHHHHT
T ss_pred eEEEecccccccC
Confidence 4899999999864
No 27
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus}
Probab=45.35 E-value=6.5 Score=35.63 Aligned_cols=28 Identities=14% Similarity=0.188 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcceEEEEe
Q 023323 136 ENAYRMVMKSMLRWVKLNMDPKKTRVFFTS 165 (284)
Q Consensus 136 ~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt 165 (284)
.+.|+..++.+++.+.+.. .++.|++-+
T Consensus 245 ~~~~~~~l~~li~~ir~~~--p~~~I~l~~ 272 (347)
T 2waa_A 245 RATYINTYTRFVRTLLDNH--PQATIVLTE 272 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHC--TTCEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCEEEEEe
Confidence 5678888888888886532 345666654
No 28
>1fll_X B-cell surface antigen CD40; TRAF3 with CD40 peptide, TNF signaling, apoptosis; 3.50A {Homo sapiens}
Probab=43.76 E-value=12 Score=21.11 Aligned_cols=11 Identities=18% Similarity=0.135 Sum_probs=9.2
Q ss_pred CCCcccccCCC
Q 023323 258 YADCTHWCLPG 268 (284)
Q Consensus 258 ~~DC~HWCLPG 268 (284)
-+|-+|||+|-
T Consensus 6 vqeTl~~~qPV 16 (26)
T 1fll_X 6 VQETLHGSQPV 16 (26)
T ss_dssp CCCCCCCSSSC
T ss_pred hhHHhhcCccc
Confidence 47999999983
No 29
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=42.84 E-value=12 Score=34.42 Aligned_cols=27 Identities=22% Similarity=0.481 Sum_probs=22.7
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.++|++|+||||- -|...||+.+|+..
T Consensus 176 ~l~glkva~vGD~--~nva~Sl~~~~~~~ 202 (340)
T 4ep1_A 176 TFKGIKLAYVGDG--NNVCHSLLLASAKV 202 (340)
T ss_dssp CCTTCEEEEESCC--CHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCC--chhHHHHHHHHHHc
Confidence 4789999999995 56899999988754
No 30
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus}
Probab=42.79 E-value=7.3 Score=35.56 Aligned_cols=76 Identities=9% Similarity=0.090 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcC
Q 023323 136 ENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWGGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGN 215 (284)
Q Consensus 136 ~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (284)
.+.|+..++.+++.+.+.. .++.|++-+. |... + + ....+.+++++..+.
T Consensus 266 ~~~~~~~l~~li~~ir~~~--p~a~Iil~~p-p~~~--~---------~----------------~~~~i~~~~~~~~~~ 315 (366)
T 2w9x_A 266 HADYVANYVKFVKQLHSNN--ARAQFILMNS-DQSN--G---------E----------------IAEQVGKVVAQLKGG 315 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHC--TTCEEEEEEE-SCGG--G---------H----------------HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCeEEEEeC-CCcC--c---------h----------------HHHHHHHHHHHHHhc
Confidence 4678899999998886642 3456666552 3221 0 1 012334444433323
Q ss_pred CCcceEEeeccccccccccCCCcccc
Q 023323 216 SKFPITFLNITQLSSYRKDAHTSIYK 241 (284)
Q Consensus 216 ~~~~v~lLdiT~ls~~R~DgHp~~y~ 241 (284)
...++.++|+.....+-.|-||+.-+
T Consensus 316 ~~~~v~~vd~~~~~~~~dd~HPn~~G 341 (366)
T 2w9x_A 316 GLHQVEQIVFKGLDYSGCHWHPSAND 341 (366)
T ss_dssp TCCCEEEEEECCCCCCBGGGBCCHHH
T ss_pred CCCcEEEEEccCCCCCCCCCCcCHHH
Confidence 34679999986555555667877543
No 31
>1vcc_A DNA topoisomerase I; DNA binding; HET: DNA; 1.60A {Vaccinia virus} SCOP: d.121.1.1
Probab=42.41 E-value=7 Score=27.91 Aligned_cols=15 Identities=60% Similarity=1.032 Sum_probs=11.9
Q ss_pred CceEEEe-ccccchhH
Q 023323 8 KRMMFVG-DSLNRGQY 22 (284)
Q Consensus 8 K~i~FVG-DSl~RNq~ 22 (284)
.+|+||| ||=+|-|+
T Consensus 55 ~~lIfvG~DSKgrkQY 70 (77)
T 1vcc_A 55 TRLIFVGSDSKGRRQY 70 (77)
T ss_dssp TSEEEEEECTTSCEEE
T ss_pred CceEEEeecCCCceee
Confidence 4699999 88888764
No 32
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=42.35 E-value=13 Score=33.73 Aligned_cols=29 Identities=21% Similarity=0.209 Sum_probs=24.1
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.+.|++|++|||-..-|...||+-+|+..
T Consensus 151 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~ 179 (310)
T 3csu_A 151 RLDNLHVAMVGDLKYGRTVHSLTQALAKF 179 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHHHTS
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhC
Confidence 47899999999966557899999988754
No 33
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=42.20 E-value=13 Score=34.03 Aligned_cols=26 Identities=23% Similarity=0.370 Sum_probs=22.3
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHR 31 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~ 31 (284)
.++|++|+||||- -|...||+-+++.
T Consensus 154 ~l~glkva~vGD~--~rva~Sl~~~~~~ 179 (323)
T 3gd5_A 154 RLAGLKLAYVGDG--NNVAHSLLLGCAK 179 (323)
T ss_dssp CCTTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCC--CcHHHHHHHHHHH
Confidence 4789999999997 6789999988854
No 34
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=40.85 E-value=17 Score=32.80 Aligned_cols=29 Identities=24% Similarity=0.348 Sum_probs=24.2
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.+.|++|++|||-..-|...||+-+++..
T Consensus 146 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~ 174 (299)
T 1pg5_A 146 TIDGLVFALLGDLKYARTVNSLLRILTRF 174 (299)
T ss_dssp CSTTCEEEEEECCSSCHHHHHHHHHGGGS
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhC
Confidence 47899999999976667899999888744
No 35
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A*
Probab=40.32 E-value=7 Score=35.19 Aligned_cols=28 Identities=14% Similarity=0.303 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcceEEEEe
Q 023323 136 ENAYRMVMKSMLRWVKLNMDPKKTRVFFTS 165 (284)
Q Consensus 136 ~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt 165 (284)
.+.|+..++.+++.|.+.. .++.|++-+
T Consensus 233 ~~~~~~~l~~li~~ir~~~--p~a~Iil~~ 260 (341)
T 2wao_A 233 KTKFVTAYKNLISEVRRNY--PDAHIFCCV 260 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHC--TTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCeEEEEe
Confidence 5678888888888885532 245666666
No 36
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=40.21 E-value=13 Score=33.84 Aligned_cols=27 Identities=19% Similarity=0.432 Sum_probs=21.9
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.+.|++|+||||- .|...||+=+|+..
T Consensus 152 ~l~gl~va~vGD~--~~va~Sl~~~~~~~ 178 (321)
T 1oth_A 152 SLKGLTLSWIGDG--NNILHSIMMSAAKF 178 (321)
T ss_dssp CCTTCEEEEESCS--SHHHHHHHTTTGGG
T ss_pred CcCCcEEEEECCc--hhhHHHHHHHHHHc
Confidence 4789999999993 47999998777654
No 37
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=40.07 E-value=13 Score=34.17 Aligned_cols=27 Identities=22% Similarity=0.436 Sum_probs=23.0
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.+.|++|+||||- -|...||+.+++..
T Consensus 172 ~l~glkva~vGD~--~rva~Sl~~~~~~~ 198 (339)
T 4a8t_A 172 KLEDCKVVFVGDA--TQVCFSLGLITTKM 198 (339)
T ss_dssp CGGGCEEEEESSC--CHHHHHHHHHHHHT
T ss_pred CCCCCEEEEECCC--chhHHHHHHHHHHc
Confidence 5789999999997 67899999888754
No 38
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=39.91 E-value=15 Score=33.23 Aligned_cols=29 Identities=28% Similarity=0.374 Sum_probs=23.8
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.+.|++|+||||-..-|...||+.+++..
T Consensus 148 ~l~glkva~vGD~~~~rva~Sl~~~~~~~ 176 (306)
T 4ekn_B 148 RIDGIKIAFVGDLKYGRTVHSLVYALSLF 176 (306)
T ss_dssp CSTTCEEEEESCTTTCHHHHHHHHHHHTS
T ss_pred CcCCCEEEEEcCCCCCcHHHHHHHHHHhc
Confidence 47899999999966557999999888643
No 39
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP}
Probab=38.93 E-value=11 Score=34.97 Aligned_cols=30 Identities=7% Similarity=0.061 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHhhCCCCcceEEEEecCC
Q 023323 137 NAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSP 168 (284)
Q Consensus 137 ~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP 168 (284)
+.|+..++.+++.|.+. ...+.|++-+..|
T Consensus 264 ~~~~~~l~~li~~ir~~--~P~a~Illv~p~~ 293 (385)
T 3skv_A 264 VDFPANLVGFVQIIRER--HPLTPIVLGSSVY 293 (385)
T ss_dssp TTHHHHHHHHHHHHHTT--CSSSCEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHH--CCCCcEEEEcCCC
Confidence 45677777777777553 2345677766554
No 40
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=37.78 E-value=15 Score=34.07 Aligned_cols=27 Identities=22% Similarity=0.436 Sum_probs=23.0
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.+.|++|+||||- -|...||+.+|+..
T Consensus 150 ~l~glkva~vGD~--~rva~Sl~~~~~~~ 176 (355)
T 4a8p_A 150 KLEDCKVVFVGDA--TQVCFSLGLITTKM 176 (355)
T ss_dssp CGGGCEEEEESCC--CHHHHHHHHHHHHT
T ss_pred CCCCCEEEEECCC--chhHHHHHHHHHHc
Confidence 5789999999997 67899999888754
No 41
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=36.37 E-value=13 Score=34.10 Aligned_cols=26 Identities=31% Similarity=0.563 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcceEEEEe
Q 023323 136 ENAYRMVMKSMLRWVKLNMDPKKTRVFFTS 165 (284)
Q Consensus 136 ~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt 165 (284)
.+.|+..|+.+++.+.+. ..++++-|
T Consensus 251 ~~~~~~~l~~ii~~lr~~----~a~vilvt 276 (375)
T 2o14_A 251 EAEFKEVMRDMIRQVKAK----GADVILST 276 (375)
T ss_dssp HHHHHHHHHHHHHHHHTT----TCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHC----CCEEEEEC
Confidence 567888999988888552 34566655
No 42
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=33.84 E-value=19 Score=33.28 Aligned_cols=28 Identities=18% Similarity=0.277 Sum_probs=22.1
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.+.|++|+||||-=+ |-..|++.+++..
T Consensus 178 ~l~gl~ia~vGD~~~-~va~S~~~~~~~~ 205 (358)
T 4h31_A 178 ALADIQFAYLGDARN-NVGNSLMVGAAKM 205 (358)
T ss_dssp CGGGCEEEEESCTTS-HHHHHHHHHHHHH
T ss_pred CcCceEEEecCCCCc-ccchHHHHHHHhc
Confidence 478899999999323 6899999888654
No 43
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=33.70 E-value=21 Score=32.55 Aligned_cols=28 Identities=21% Similarity=0.478 Sum_probs=22.6
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.+.|++|+|||| ..-|...||+-+|+..
T Consensus 164 ~l~gl~va~vGD-~~~rva~Sl~~~~~~~ 191 (325)
T 1vlv_A 164 RLKGVKVVFMGD-TRNNVATSLMIACAKM 191 (325)
T ss_dssp CSTTCEEEEESC-TTSHHHHHHHHHHHHT
T ss_pred CcCCcEEEEECC-CCcCcHHHHHHHHHHC
Confidence 478999999999 3247899999888754
No 44
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=32.22 E-value=15 Score=30.94 Aligned_cols=66 Identities=8% Similarity=0.198 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcCC
Q 023323 137 NAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWGGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNS 216 (284)
Q Consensus 137 ~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (284)
+.|+..|+.+++.+.+. ...+++-|..|.- .|.. |.. .+ ......++++++.++.
T Consensus 108 ~~~~~~l~~~i~~~~~~----g~~vil~tp~p~~----~~~~---~~~-~~-------------~~~~y~~~~~~vA~~~ 162 (233)
T 1k7c_A 108 LTFPAYLENAAKLFTAK----GAKVILSSQTPNN----PWET---GTF-VN-------------SPTRFVEYAELAAEVA 162 (233)
T ss_dssp EBHHHHHHHHHHHHHHT----TCEEEEECCCCCC----TTTT---SSC-CC-------------CCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHC----CCEEEEECCCCcc----ccCC---Ccc-cc-------------chHHHHHHHHHHHHHh
Confidence 45777888888776442 3456665655532 2321 111 10 0123445555554432
Q ss_pred CcceEEeeccccc
Q 023323 217 KFPITFLNITQLS 229 (284)
Q Consensus 217 ~~~v~lLdiT~ls 229 (284)
.+.++|...++
T Consensus 163 --~v~~iD~~~~~ 173 (233)
T 1k7c_A 163 --GVEYVDHWSYV 173 (233)
T ss_dssp --TCEEECHHHHH
T ss_pred --CCeEEecHHHH
Confidence 59999998654
No 45
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=30.31 E-value=25 Score=31.85 Aligned_cols=29 Identities=17% Similarity=0.164 Sum_probs=23.9
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.+.|++|+||||-..-|...||+=+++..
T Consensus 152 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~ 180 (308)
T 1ml4_A 152 RIDGLKIGLLGDLKYGRTVHSLAEALTFY 180 (308)
T ss_dssp CSSSEEEEEESCTTTCHHHHHHHHHGGGS
T ss_pred CCCCeEEEEeCCCCcCchHHHHHHHHHHC
Confidence 47899999999976557899999888754
No 46
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=28.36 E-value=29 Score=31.24 Aligned_cols=27 Identities=22% Similarity=0.287 Sum_probs=22.6
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.+.|++|++|||- -|...||+-+|+..
T Consensus 151 ~l~gl~ia~vGD~--~rva~Sl~~~~~~~ 177 (301)
T 2ef0_A 151 GLAGLEVAWVGDG--NNVLNSLLEVAPLA 177 (301)
T ss_dssp CCTTCEEEEESCC--CHHHHHHHHHHHHH
T ss_pred CcCCcEEEEECCC--chhHHHHHHHHHHc
Confidence 4789999999994 57899999888754
No 47
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=27.55 E-value=21 Score=29.51 Aligned_cols=22 Identities=18% Similarity=0.225 Sum_probs=17.2
Q ss_pred ccccCCCCccEEEEeccccccc
Q 023323 91 NHGQHWKGADILVFNTYLWWMT 112 (284)
Q Consensus 91 ~~~~~w~~~DvlV~ntGhWw~~ 112 (284)
+....+.++|.|||.+=-||..
T Consensus 80 ~~~~~l~~AD~iV~~~P~y~~~ 101 (212)
T 3r6w_A 80 QLVGELFDSDLLVISTPMYNFS 101 (212)
T ss_dssp HHHHHHHHCSEEEEEEECBTTB
T ss_pred HHHHHHHhCCEEEEEcCccccc
Confidence 3345677899999999999863
No 48
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=26.94 E-value=32 Score=31.17 Aligned_cols=27 Identities=26% Similarity=0.496 Sum_probs=22.6
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.+.|++|+||||- -|...||+=+|+..
T Consensus 152 ~l~gl~va~vGD~--~rva~Sl~~~~~~~ 178 (315)
T 1pvv_A 152 TIKGVKVVYVGDG--NNVAHSLMIAGTKL 178 (315)
T ss_dssp CCTTCEEEEESCC--CHHHHHHHHHHHHT
T ss_pred CcCCcEEEEECCC--cchHHHHHHHHHHC
Confidence 4789999999994 57899999888754
No 49
>3t6g_B Breast cancer anti-estrogen resistance protein 1; CDC25-homology domain, GTPase exchange factor, focal-adhesio targeting domain, signaling protein; 2.50A {Homo sapiens}
Probab=25.87 E-value=3.8 Score=35.60 Aligned_cols=16 Identities=38% Similarity=0.906 Sum_probs=12.3
Q ss_pred ccCCceEEEeccccch
Q 023323 5 LRGKRMMFVGDSLNRG 20 (284)
Q Consensus 5 ~RgK~i~FVGDSl~RN 20 (284)
|-+-+++||||.|+|+
T Consensus 144 lsAHKLVfIGDTL~r~ 159 (229)
T 3t6g_B 144 LSAHKLVFIGDTLSRQ 159 (229)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred EEeeeeeeecchHHHh
Confidence 3445788999999985
No 50
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=25.57 E-value=37 Score=30.43 Aligned_cols=29 Identities=24% Similarity=0.390 Sum_probs=24.4
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.++|++|++|||=..-|-..||+-+|+..
T Consensus 143 ~l~gl~va~vGDl~~~rva~Sl~~~~~~~ 171 (291)
T 3d6n_B 143 EVKDLRVLYVGDIKHSRVFRSGAPLLNMF 171 (291)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHHT
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHHC
Confidence 47899999999966678999999888754
No 51
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=25.48 E-value=33 Score=31.44 Aligned_cols=28 Identities=18% Similarity=0.284 Sum_probs=22.8
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.++|++|+||||- .-|...||+-+++..
T Consensus 152 ~l~gl~va~vGD~-~~~va~Sl~~~~~~~ 179 (335)
T 1dxh_A 152 PLHDISYAYLGDA-RNNMGNSLLLIGAKL 179 (335)
T ss_dssp CGGGCEEEEESCC-SSHHHHHHHHHHHHT
T ss_pred CcCCeEEEEecCC-ccchHHHHHHHHHHc
Confidence 5789999999994 237899999888754
No 52
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=24.24 E-value=39 Score=30.46 Aligned_cols=28 Identities=25% Similarity=0.298 Sum_probs=22.7
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.++|++|+||||- --|...||+-+|+..
T Consensus 145 ~l~gl~va~vGD~-~~rva~Sl~~~~~~~ 172 (307)
T 2i6u_A 145 ALRGLRLSYFGDG-ANNMAHSLLLGGVTA 172 (307)
T ss_dssp CCTTCEEEEESCT-TSHHHHHHHHHHHHT
T ss_pred CcCCeEEEEECCC-CcCcHHHHHHHHHHC
Confidence 4789999999994 238899999888754
No 53
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=24.10 E-value=39 Score=30.91 Aligned_cols=28 Identities=14% Similarity=0.172 Sum_probs=22.7
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.++|++|+||||- .-|...||+-+++..
T Consensus 152 ~l~gl~ia~vGD~-~~~va~Sl~~~~~~~ 179 (333)
T 1duv_G 152 AFNEMTLVYAGDA-RNNMGNSMLEAAALT 179 (333)
T ss_dssp CGGGCEEEEESCT-TSHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCC-ccchHHHHHHHHHHc
Confidence 5789999999994 237899999887754
No 54
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=23.96 E-value=40 Score=31.23 Aligned_cols=28 Identities=25% Similarity=0.344 Sum_probs=22.8
Q ss_pred cccCCceEEEeccccchhHHHHhhhhhcc
Q 023323 4 TLRGKRMMFVGDSLNRGQYISMVCLLHRL 32 (284)
Q Consensus 4 ~~RgK~i~FVGDSl~RNq~eSLlClL~~~ 32 (284)
.+.|++|+||||- .-|...||+-+|+..
T Consensus 173 ~l~gl~va~vGD~-~~rva~Sl~~~~~~l 200 (359)
T 2w37_A 173 KLQGLTLTFMGDG-RNNVANSLLVTGAIL 200 (359)
T ss_dssp CCTTCEEEEESCT-TSHHHHHHHHHHHHH
T ss_pred CcCCeEEEEECCC-ccchHHHHHHHHHHc
Confidence 5789999999994 237899999888754
No 55
>1oeg_A Apolipoprotein E; sialic acid, heparin-binding, repeat, signal, disease mutation, polymorphism; NMR {Homo sapiens} SCOP: j.39.1.1
Probab=22.71 E-value=30 Score=19.78 Aligned_cols=16 Identities=19% Similarity=0.219 Sum_probs=12.2
Q ss_pred cchhHHHHhhhhhccc
Q 023323 18 NRGQYISMVCLLHRLV 33 (284)
Q Consensus 18 ~RNq~eSLlClL~~~~ 33 (284)
.|+||+.|+=-+..++
T Consensus 6 mr~Q~~~lveKvq~a~ 21 (26)
T 1oeg_A 6 MQRQWAGLVEKVQAAV 21 (26)
T ss_dssp TTTHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4889999987766653
No 56
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=21.62 E-value=35 Score=29.54 Aligned_cols=14 Identities=21% Similarity=0.508 Sum_probs=11.9
Q ss_pred cCCceEEEeccccc
Q 023323 6 RGKRMMFVGDSLNR 19 (284)
Q Consensus 6 RgK~i~FVGDSl~R 19 (284)
.|+.+++|||+++=
T Consensus 229 ~~~~v~~vGDGiND 242 (297)
T 4fe3_A 229 DNSNIILLGDSQGD 242 (297)
T ss_dssp TCCEEEEEESSGGG
T ss_pred cCCEEEEEeCcHHH
Confidence 45789999999987
Done!