BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023326
(284 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297740592|emb|CBI30774.3| unnamed protein product [Vitis vinifera]
Length = 277
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/244 (79%), Positives = 208/244 (85%), Gaps = 9/244 (3%)
Query: 36 ATSNPHLKCFLNQNKQPPVSNSNANASKKNKLVVKVGKKEQHLWQKRDSAGSGQKALNLV 95
TS H+KC N PP + + + ++ KVGKKE HLW+KRDS GSGQKALNLV
Sbjct: 41 VTSMRHVKCCHN----PP-----SYRAVEKEISKKVGKKEHHLWRKRDSIGSGQKALNLV 91
Query: 96 RIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQ 155
RIVSELPNEK AVYGALDKWTAWETEFPLIAAAKALRILRKR QW RVIQVAKWMLSKGQ
Sbjct: 92 RIVSELPNEKEAVYGALDKWTAWETEFPLIAAAKALRILRKRNQWKRVIQVAKWMLSKGQ 151
Query: 156 GATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKII 215
GATMGTYDTLLLAFD D R DEAESLWNMILHT TRSISK+LFSRMISLYDHHDM +K+I
Sbjct: 152 GATMGTYDTLLLAFDMDWRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDMRDKVI 211
Query: 216 EVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKWKYIHFKGERVRVRRD 275
EVFADMEELGV+PDEDTVRR+A AFQ +GQ+DKQKLVLKKY KWKYIHF GERVRVRRD
Sbjct: 212 EVFADMEELGVKPDEDTVRRVACAFQTLGQEDKQKLVLKKYQCKWKYIHFNGERVRVRRD 271
Query: 276 AWYE 279
AW E
Sbjct: 272 AWDE 275
>gi|224114395|ref|XP_002316747.1| predicted protein [Populus trichocarpa]
gi|222859812|gb|EEE97359.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/268 (69%), Positives = 216/268 (80%), Gaps = 2/268 (0%)
Query: 12 GFSNSCRIPPLQTASGFSLLTTKLATSNPHLKCFLNQNKQPPVSNSNANASKKNKLVVKV 71
S+ P ++ + F L T +L + P + L N+ A + K+V K
Sbjct: 6 ALSSGFLFPSVKIS--FFLRTARLTSLEPKVTSALCVKCSKKQLKLNSRADENRKVVKKS 63
Query: 72 GKKEQHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKAL 131
GKKE HLWQKRDSAGSGQKALNLVRIVSELPNEK AVYGALDKWTAWETEFPLIAAAKAL
Sbjct: 64 GKKEHHLWQKRDSAGSGQKALNLVRIVSELPNEKEAVYGALDKWTAWETEFPLIAAAKAL 123
Query: 132 RILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTR 191
+IL++R QW RVIQVAKWMLSKGQGAT+GTYDTLLLAFDKD R DEA+SLWNMI+H TR
Sbjct: 124 KILQQRRQWTRVIQVAKWMLSKGQGATLGTYDTLLLAFDKDDRVDEAKSLWNMIIHVHTR 183
Query: 192 SISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKL 251
S+SKRLFSRMISLYDHH+M ++IIEVFADMEELGVRPDEDTV R+A AF+++GQ++K++L
Sbjct: 184 SMSKRLFSRMISLYDHHNMQDEIIEVFADMEELGVRPDEDTVWRVARAFKKLGQEEKREL 243
Query: 252 VLKKYLSKWKYIHFKGERVRVRRDAWYE 279
VL++YL KWKYIHF GERVRV+RD W E
Sbjct: 244 VLERYLCKWKYIHFNGERVRVKRDGWNE 271
>gi|449513186|ref|XP_004164255.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Cucumis sativus]
Length = 270
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/265 (69%), Positives = 211/265 (79%), Gaps = 13/265 (4%)
Query: 24 TASGFSLLTTKLATSNPHLK---------CFLNQNKQPPVSNSNANASKKNKLVVKVGKK 74
T++GF L K+ H K C NQ QP S + + + ++V KVGK+
Sbjct: 7 TSTGFDALMPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFT----TPERRVVKKVGKE 62
Query: 75 EQHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRIL 134
HLW+KRDSAGSGQKALNLVRIVS+ PNEK AVYG L+KW AWETEFPLIAAAKALRIL
Sbjct: 63 THHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRIL 122
Query: 135 RKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSIS 194
RKR QW RVIQVAKWMLSKGQGATMGTYDTLLLAFD D R DEAESLWNMILHT TRSIS
Sbjct: 123 RKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSIS 182
Query: 195 KRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLK 254
KR+FSRMISLY+HHD+ +KIIE+FADMEELGV+PDEDTVRR+ AFQ++GQ+D +K+V K
Sbjct: 183 KRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVCRAFQKLGQEDNRKMVYK 242
Query: 255 KYLSKWKYIHFKGERVRVRRDAWYE 279
+Y +WKYIHFKGERVRVRRD W E
Sbjct: 243 RYSCQWKYIHFKGERVRVRRDGWDE 267
>gi|255571955|ref|XP_002526919.1| conserved hypothetical protein [Ricinus communis]
gi|223533738|gb|EEF35472.1| conserved hypothetical protein [Ricinus communis]
Length = 224
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 169/213 (79%), Positives = 186/213 (87%)
Query: 57 SNANASKKNKLVVKVGKKEQHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWT 116
SN K K V K GK+E HLW+KRDSA SG+KAL+LVRIV ELP+EK VYGALDKWT
Sbjct: 2 SNPRDDKSRKPVKKAGKEEHHLWKKRDSARSGEKALSLVRIVCELPDEKECVYGALDKWT 61
Query: 117 AWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRAD 176
AWETEFPLIA AK LRILRK QWLRVIQVAKWMLSKGQG TMGTYDTLLLAFD D+R D
Sbjct: 62 AWETEFPLIAVAKGLRILRKHNQWLRVIQVAKWMLSKGQGTTMGTYDTLLLAFDMDNRVD 121
Query: 177 EAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRI 236
EA SLWNMILHT RSISKRLFSRMISLYDHH+MP+ IIE+FADMEELGVRPDEDTVRR+
Sbjct: 122 EAASLWNMILHTHVRSISKRLFSRMISLYDHHNMPDGIIEIFADMEELGVRPDEDTVRRV 181
Query: 237 ASAFQRVGQDDKQKLVLKKYLSKWKYIHFKGER 269
A AF+ +GQ++KQKLVLK+Y+S+WKYIHFKGER
Sbjct: 182 ARAFKELGQEEKQKLVLKRYMSRWKYIHFKGER 214
>gi|356555478|ref|XP_003546058.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Glycine max]
Length = 288
Score = 343 bits (879), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 160/209 (76%), Positives = 184/209 (88%)
Query: 76 QHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILR 135
HLW+ RDSA SGQKAL LVR V +LPNEK AVYGALDKWTAWETEFP+IA +KAL+ILR
Sbjct: 80 HHLWKSRDSAQSGQKALALVRTVYKLPNEKEAVYGALDKWTAWETEFPVIAVSKALKILR 139
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
KRG W+RVIQVAKWMLSKGQGATMGTYDTLLLAFD D R DEAESLWNMI+H RS+SK
Sbjct: 140 KRGHWVRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMIIHAHMRSVSK 199
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
RLFSRMISLYDHH+MP+KII+VFADMEEL ++PDEDTVRR+A AF+ +G ++K+KLV+K+
Sbjct: 200 RLFSRMISLYDHHNMPDKIIDVFADMEELRLKPDEDTVRRVARAFRELGDEEKRKLVIKQ 259
Query: 256 YLSKWKYIHFKGERVRVRRDAWYESGSTN 284
Y KWKYIHF GERVRVR +AW ++ STN
Sbjct: 260 YGLKWKYIHFNGERVRVRTEAWEDNKSTN 288
>gi|255645904|gb|ACU23441.1| unknown [Glycine max]
Length = 288
Score = 342 bits (878), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 160/209 (76%), Positives = 184/209 (88%)
Query: 76 QHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILR 135
HLW+ RDSA SGQKAL LVR V +LPNEK AVYGALDKWTAWETEFP+IA +KAL+ILR
Sbjct: 80 HHLWKSRDSAQSGQKALALVRTVYKLPNEKEAVYGALDKWTAWETEFPVIAVSKALKILR 139
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
KRG W+RVIQVAKWMLSKGQGATMGTYDTLLLAFD D R DEAESLWNMI+H RS+SK
Sbjct: 140 KRGHWVRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMIIHAHLRSVSK 199
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
RLFSRMISLYDHH+MP+KII+VFADMEEL ++PDEDTVRR+A AF+ +G ++K+KLV+K+
Sbjct: 200 RLFSRMISLYDHHNMPDKIIDVFADMEELRLKPDEDTVRRVARAFRELGDEEKRKLVIKQ 259
Query: 256 YLSKWKYIHFKGERVRVRRDAWYESGSTN 284
Y KWKYIHF GERVRVR +AW ++ STN
Sbjct: 260 YGLKWKYIHFNGERVRVRTEAWEDNKSTN 288
>gi|297800166|ref|XP_002867967.1| hypothetical protein ARALYDRAFT_914772 [Arabidopsis lyrata subsp.
lyrata]
gi|297313803|gb|EFH44226.1| hypothetical protein ARALYDRAFT_914772 [Arabidopsis lyrata subsp.
lyrata]
Length = 284
Score = 340 bits (871), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 173/279 (62%), Positives = 210/279 (75%), Gaps = 9/279 (3%)
Query: 2 ICRSSWVMGFGFSNSCRIPPLQTASGFSLLTTKLATSNPHLK------CFLNQNKQPPVS 55
+C + +G GF+ P Q FSLL S LK C ++ +
Sbjct: 3 LCNFNPTLG-GFTFQGLSKP-QEFGCFSLLEFPSCGSYSKLKTKRFGFCIRSKFSEKQAG 60
Query: 56 NSNANASKKNKLVVKVGKKEQHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKW 115
+ N+ + KVGKKE HLW+K DSAGSGQKALNLVR++S LPNEK AVYGAL+KW
Sbjct: 61 KLDVATVNSNE-IKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKW 119
Query: 116 TAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRA 175
AWE EFP+IAAAKAL+ILRKR QW RVIQ+AKWMLSKGQGATMGTYDTLLLAFD D RA
Sbjct: 120 VAWEVEFPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDTLLLAFDMDQRA 179
Query: 176 DEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRR 235
DEAESLWNMILHT TRSI +RLF+RMI+LY H+D+ +K+IEVFADMEEL VRPDEDT RR
Sbjct: 180 DEAESLWNMILHTHTRSIPRRLFARMIALYAHYDLHDKVIEVFADMEELKVRPDEDTARR 239
Query: 236 IASAFQRVGQDDKQKLVLKKYLSKWKYIHFKGERVRVRR 274
+A AF+ +GQ++ +KL+L++YLS++KYI+F GERVRV+R
Sbjct: 240 VARAFRELGQEENRKLILRRYLSEFKYIYFNGERVRVKR 278
>gi|356549156|ref|XP_003542963.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g18975, chloroplastic-like [Glycine max]
Length = 289
Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 174/286 (60%), Positives = 206/286 (72%), Gaps = 2/286 (0%)
Query: 1 MICRSSWVMGFGFSNSC--RIPPLQTASGFSLLTTKLATSNPHLKCFLNQNKQPPVSNSN 58
M C SS V S C + P + + +T T++P C Q +
Sbjct: 4 MTCESSIVSPLFLSRICQAKTDPTRAFLLENKFSTITVTASPKTSCIRCTVVQSKFGHKG 63
Query: 59 ANASKKNKLVVKVGKKEQHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAW 118
+ +K K GKKE HLW+ RDSA SGQKAL LVR V +LPNEK AVYGALDKWTAW
Sbjct: 64 GSPMEKKKGKKTTGKKEHHLWKSRDSAQSGQKALALVRTVYKLPNEKEAVYGALDKWTAW 123
Query: 119 ETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEA 178
ETEFP+IA +KAL+ILRKRG W+R IQVAKWM+SKGQGATMGTYDTLLLAFD D R D A
Sbjct: 124 ETEFPVIAVSKALKILRKRGHWVRAIQVAKWMISKGQGATMGTYDTLLLAFDMDKRVDVA 183
Query: 179 ESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIAS 238
ES WNMI+H RS+SKRLFSRMISL DHH+M +KIIEVFADMEEL V+PDEDTVRR+A
Sbjct: 184 ESSWNMIIHAHIRSVSKRLFSRMISLXDHHNMLDKIIEVFADMEELRVKPDEDTVRRVAR 243
Query: 239 AFQRVGQDDKQKLVLKKYLSKWKYIHFKGERVRVRRDAWYESGSTN 284
AF+ +G+++K KLV+K+Y KWKYIHF GERV VR +AW ++ STN
Sbjct: 244 AFRELGEEEKWKLVIKRYGLKWKYIHFNGERVXVRTEAWEDNESTN 289
>gi|18415213|ref|NP_567571.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|186512032|ref|NP_001119009.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186688|ref|NP_001190768.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635632|sp|Q2V3H0.2|PP322_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18975, chloroplastic; Flags: Precursor
gi|332658715|gb|AEE84115.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658717|gb|AEE84117.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658718|gb|AEE84118.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 287
Score = 336 bits (861), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 171/270 (63%), Positives = 206/270 (76%), Gaps = 14/270 (5%)
Query: 19 IPPLQTAS------GFSLLTTKLATSNPHLK------CFLNQ--NKQPPVSNSNANASKK 64
I PLQ S FSLL + S LK C ++ K+ + A+
Sbjct: 12 IFPLQGLSKSQEFICFSLLQSPRCGSYSSLKTKRFGFCIRSKFSEKEAGKLDRGYVATVN 71
Query: 65 NKLVVKVGKKEQHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPL 124
+K + KVGKKE HLW+K DSAGSGQKALNLVR++S LPNEK AVYGAL+KW AWE EFP+
Sbjct: 72 SKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPI 131
Query: 125 IAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNM 184
IAAAKAL+ILRKR QW RVIQ+AKWMLSKGQGATMGTYD LLLAFD D RADEAESLWNM
Sbjct: 132 IAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLWNM 191
Query: 185 ILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
ILHT TRSI +RLF+RMI+LY HHD+ +K+IEVFADMEEL V PDED+ RR+A AF+ +
Sbjct: 192 ILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFRELN 251
Query: 245 QDDKQKLVLKKYLSKWKYIHFKGERVRVRR 274
Q++ +KL+L++YLS++KYI+F GERVRV+R
Sbjct: 252 QEENRKLILRRYLSEYKYIYFNGERVRVKR 281
>gi|79325165|ref|NP_001031667.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658716|gb|AEE84116.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 260
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 157/214 (73%), Positives = 187/214 (87%)
Query: 61 ASKKNKLVVKVGKKEQHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWET 120
A+ +K + KVGKKE HLW+K DSAGSGQKALNLVR++S LPNEK AVYGAL+KW AWE
Sbjct: 41 ATVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEV 100
Query: 121 EFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAES 180
EFP+IAAAKAL+ILRKR QW RVIQ+AKWMLSKGQGATMGTYD LLLAFD D RADEAES
Sbjct: 101 EFPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAES 160
Query: 181 LWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAF 240
LWNMILHT TRSI +RLF+RMI+LY HHD+ +K+IEVFADMEEL V PDED+ RR+A AF
Sbjct: 161 LWNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAF 220
Query: 241 QRVGQDDKQKLVLKKYLSKWKYIHFKGERVRVRR 274
+ + Q++ +KL+L++YLS++KYI+F GERVRV+R
Sbjct: 221 RELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 254
>gi|2832625|emb|CAA16754.1| putative protein [Arabidopsis thaliana]
gi|7268691|emb|CAB78899.1| putative protein [Arabidopsis thaliana]
Length = 626
Score = 323 bits (828), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 150/208 (72%), Positives = 180/208 (86%)
Query: 61 ASKKNKLVVKVGKKEQHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWET 120
A+ +K + KVGKKE HLW+K DSAGSGQKALNLVR++S LPNEK AVYGAL+KW AWE
Sbjct: 41 ATVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEV 100
Query: 121 EFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAES 180
EFP+IAAAKAL+ILRKR QW RVIQ+AKWMLSKGQGATMGTYD LLLAFD D RADEAES
Sbjct: 101 EFPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAES 160
Query: 181 LWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAF 240
LWNMILHT TRSI +RLF+RMI+LY HHD+ +K+IEVFADMEEL V PDED+ RR+A AF
Sbjct: 161 LWNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAF 220
Query: 241 QRVGQDDKQKLVLKKYLSKWKYIHFKGE 268
+ + Q++ +KL+L++YLS++KYI+F +
Sbjct: 221 RELNQEENRKLILRRYLSEYKYIYFNDQ 248
>gi|449464466|ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
[Cucumis sativus]
Length = 1830
Score = 300 bits (767), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 144/181 (79%), Positives = 159/181 (87%), Gaps = 4/181 (2%)
Query: 56 NSNANASKKN----KLVVKVGKKEQHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGA 111
N +A ++N ++V KVGK+ HLW+KRDSAGSGQKALNLVRIVS+ PNEK AVYG
Sbjct: 823 NQEIDAIRRNETWERVVKKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE 882
Query: 112 LDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDK 171
L+KW AWETEFPLIAAAKALRILRKR QW RVIQVAKWMLSKGQGATMGTYDTLLLAFD
Sbjct: 883 LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDM 942
Query: 172 DHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDED 231
D R DEAESLWNMILHT TRSISKR+FSRMISLY+HHD+ +KIIE+FADMEELGV+PDED
Sbjct: 943 DKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDED 1002
Query: 232 T 232
T
Sbjct: 1003 T 1003
>gi|226532337|ref|NP_001149127.1| EMB1417 [Zea mays]
gi|195624936|gb|ACG34298.1| EMB1417 [Zea mays]
gi|219884507|gb|ACL52628.1| unknown [Zea mays]
gi|224031003|gb|ACN34577.1| unknown [Zea mays]
Length = 249
Score = 293 bits (750), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 138/210 (65%), Positives = 170/210 (80%)
Query: 67 LVVKVGKKEQHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIA 126
LV K K+QHLW ++++AGSG+KAL L+ VS+LPNE+ A+YGALDKW+A+E EFP+IA
Sbjct: 37 LVSKKPNKQQHLWIRKETAGSGKKALRLIDAVSKLPNEREAIYGALDKWSAFEPEFPIIA 96
Query: 127 AAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMIL 186
AAKAL +L++R QWLR+IQV KW++SKGQ T TYDTLLLA D R DEAES+WN ++
Sbjct: 97 AAKALGMLKRRRQWLRIIQVTKWLMSKGQVLTWTTYDTLLLALLMDKRVDEAESVWNTVI 156
Query: 187 HTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQD 246
T TRS+ KRLFSRMI +YD H P+K++E+FADMEELGVRPDEDT RRI AF GQ+
Sbjct: 157 QTHTRSVPKRLFSRMILIYDIHQRPDKVLEIFADMEELGVRPDEDTARRIGKAFVASGQE 216
Query: 247 DKQKLVLKKYLSKWKYIHFKGERVRVRRDA 276
+K+K VL+KYL KWKYIHF GERVRVRRD
Sbjct: 217 EKEKHVLEKYLKKWKYIHFNGERVRVRRDG 246
>gi|357122518|ref|XP_003562962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Brachypodium distachyon]
Length = 241
Score = 293 bits (749), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 143/226 (63%), Positives = 173/226 (76%), Gaps = 3/226 (1%)
Query: 52 PPVSNSNANASKKNK---LVVKVGKKEQHLWQKRDSAGSGQKALNLVRIVSELPNEKHAV 108
PP S ++ + LV K KEQHLW ++DSAGSG+KAL LV VS+LPN K AV
Sbjct: 11 PPASATSGGGGRPTGTRALVSKRPNKEQHLWIRKDSAGSGKKALRLVNTVSKLPNGKEAV 70
Query: 109 YGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLA 168
YGALD+WTA+ETEFP+IAAAKAL +L+++ QW+++IQV KW++SKGQ T TYDTLLLA
Sbjct: 71 YGALDRWTAFETEFPIIAAAKALEMLKRQRQWIQIIQVTKWLMSKGQVLTWTTYDTLLLA 130
Query: 169 FDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRP 228
D R DEAES+WN ++ TRS+ KRLFSRMI +YD +P+K++EVFADMEELGV P
Sbjct: 131 LFMDGRLDEAESIWNTVIQKHTRSVPKRLFSRMILIYDSRRLPDKVLEVFADMEELGVHP 190
Query: 229 DEDTVRRIASAFQRVGQDDKQKLVLKKYLSKWKYIHFKGERVRVRR 274
DEDT RRI AF GQ+DKQK VL+KYL KWKYIHF GERVRVRR
Sbjct: 191 DEDTTRRIGRAFASSGQEDKQKPVLEKYLKKWKYIHFNGERVRVRR 236
>gi|326493972|dbj|BAJ85448.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511571|dbj|BAJ91930.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517433|dbj|BAK00083.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531618|dbj|BAJ97813.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 251
Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 139/208 (66%), Positives = 167/208 (80%)
Query: 67 LVVKVGKKEQHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIA 126
LV K K+ LW ++DSAGSG+KAL LV VS+LPNEK AVYGALD+WTA+E EFP+IA
Sbjct: 39 LVSKKPNKDHRLWIRKDSAGSGKKALCLVNTVSKLPNEKEAVYGALDRWTAFEPEFPIIA 98
Query: 127 AAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMIL 186
AAKAL +L+KR +WL++IQV KW++SKGQ T TYDTLLLA D R DEAES+WN IL
Sbjct: 99 AAKALEMLKKRRKWLQIIQVTKWLMSKGQVLTWTTYDTLLLALSMDGRVDEAESIWNTIL 158
Query: 187 HTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQD 246
T TRS+ K+LFSRMI +Y+ +P+K++E++ADMEELGVRPDEDT RRI AF GQ+
Sbjct: 159 QTYTRSVPKKLFSRMIQIYNTCHLPDKVLEIYADMEELGVRPDEDTTRRIGRAFATSGQE 218
Query: 247 DKQKLVLKKYLSKWKYIHFKGERVRVRR 274
DKQK VL+KYL KWKYIHF GERVRVRR
Sbjct: 219 DKQKPVLEKYLKKWKYIHFNGERVRVRR 246
>gi|34393638|dbj|BAC83317.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|125600619|gb|EAZ40195.1| hypothetical protein OsJ_24640 [Oryza sativa Japonica Group]
Length = 253
Score = 290 bits (743), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 152/258 (58%), Positives = 184/258 (71%), Gaps = 19/258 (7%)
Query: 25 ASGFSL-LTTKLATSNPHLKCFLNQNKQPPVSNSNANASKKNK------LVVKVGKKEQH 77
A FSL L ++A + P PP S + + LV K KE H
Sbjct: 2 AGAFSLRLGPRIAGTPP-----------PPASATKGEGRGGGRPTGSRALVSKKPNKEHH 50
Query: 78 LWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKR 137
LW ++DSAGSG+KAL+LV VS+LPNEK AVYGALDKWTA+E EFP IAAAKAL +L++R
Sbjct: 51 LWIRKDSAGSGKKALHLVNTVSKLPNEKEAVYGALDKWTAFEPEFPTIAAAKALEMLKRR 110
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
QWLR+IQVAKW++SKGQ T TYDTLLLA D R DEAES+WN I+ T TRS+ KRL
Sbjct: 111 RQWLRIIQVAKWLMSKGQVLTWTTYDTLLLALFMDGRIDEAESIWNNIIQTHTRSVPKRL 170
Query: 198 FSRMISLYDHHDMPNKIIEV-FADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
FSRMI +YD P+K++EV +ADMEELGV PDEDT RRI AF +GQ+DK+K+VL+KY
Sbjct: 171 FSRMILIYDTRHCPDKVLEVIYADMEELGVHPDEDTTRRIGRAFVTLGQEDKEKIVLEKY 230
Query: 257 LSKWKYIHFKGERVRVRR 274
L K+KY+HF GERVRVRR
Sbjct: 231 LKKYKYMHFNGERVRVRR 248
>gi|125558705|gb|EAZ04241.1| hypothetical protein OsI_26386 [Oryza sativa Indica Group]
Length = 253
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 151/258 (58%), Positives = 183/258 (70%), Gaps = 19/258 (7%)
Query: 25 ASGFSL-LTTKLATSNPHLKCFLNQNKQPPVSNSNANASKKNK------LVVKVGKKEQH 77
A FSL L ++A + P PP S + + L+ K KE H
Sbjct: 2 AGAFSLRLGPRIAGTPP-----------PPASATKGEGRGGGRPTGSRALLSKKPNKEHH 50
Query: 78 LWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKR 137
LW ++DSAGSG+KAL+LV VS+LPNEK AVYGALDKWTA+E EFP IAAAKAL +L++R
Sbjct: 51 LWIRKDSAGSGKKALHLVNTVSKLPNEKEAVYGALDKWTAFEPEFPTIAAAKALEMLKRR 110
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
QWLR+IQVAKW++SKGQ T TYDTLLLA D R DEAES+WN I+ T TRS+ KRL
Sbjct: 111 RQWLRIIQVAKWLMSKGQVLTWTTYDTLLLALFMDGRIDEAESIWNNIIQTHTRSVPKRL 170
Query: 198 FSRMISLYDHHDMPNKIIEV-FADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
FSRMI +YD P+K++EV +ADMEELGV PDEDT RRI AF +GQ+DK K+VL+KY
Sbjct: 171 FSRMILIYDTRHCPDKVLEVIYADMEELGVHPDEDTTRRIGRAFVTLGQEDKGKIVLEKY 230
Query: 257 LSKWKYIHFKGERVRVRR 274
L K+KY+HF GERVRVRR
Sbjct: 231 LKKYKYVHFNGERVRVRR 248
>gi|194699890|gb|ACF84029.1| unknown [Zea mays]
Length = 258
Score = 286 bits (731), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 138/219 (63%), Positives = 170/219 (77%), Gaps = 9/219 (4%)
Query: 67 LVVKVGKKEQHLWQKRDSAGSGQKALNLVR---------IVSELPNEKHAVYGALDKWTA 117
LV K K+QHLW ++++AGSG+KAL L+ VS+LPNE+ A+YGALDKW+A
Sbjct: 37 LVSKKPNKQQHLWIRKETAGSGKKALRLIDAVRYTLAIDTVSKLPNEREAIYGALDKWSA 96
Query: 118 WETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADE 177
+E EFP+IAAAKAL +L++R QWLR+IQV KW++SKGQ T TYDTLLLA D R DE
Sbjct: 97 FEPEFPIIAAAKALGMLKRRRQWLRIIQVTKWLMSKGQVLTWTTYDTLLLALLMDKRVDE 156
Query: 178 AESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIA 237
AES+WN ++ T TRS+ KRLFSRMI +YD H P+K++E+FADMEELGVRPDEDT RRI
Sbjct: 157 AESVWNTVIQTHTRSVPKRLFSRMILIYDIHQRPDKVLEIFADMEELGVRPDEDTARRIG 216
Query: 238 SAFQRVGQDDKQKLVLKKYLSKWKYIHFKGERVRVRRDA 276
AF GQ++K+K VL+KYL KWKYIHF GERVRVRRD
Sbjct: 217 KAFVASGQEEKEKHVLEKYLKKWKYIHFNGERVRVRRDG 255
>gi|242045910|ref|XP_002460826.1| hypothetical protein SORBIDRAFT_02g035690 [Sorghum bicolor]
gi|241924203|gb|EER97347.1| hypothetical protein SORBIDRAFT_02g035690 [Sorghum bicolor]
Length = 249
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 132/210 (62%), Positives = 168/210 (80%)
Query: 67 LVVKVGKKEQHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIA 126
LV K K+QHLW ++++AGSG+KAL L+ VS+LPNE+ A+YGALDKW+A+E EFP+IA
Sbjct: 37 LVSKKPNKQQHLWIRKETAGSGKKALRLIDAVSKLPNEREAIYGALDKWSAFEPEFPIIA 96
Query: 127 AAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMIL 186
AAKAL +L++R +WLR+IQV KW++SKGQ T TYDTL+LA D R DEAES+WN ++
Sbjct: 97 AAKALGMLKRRQKWLRIIQVTKWLMSKGQVLTWTTYDTLMLALFMDKRVDEAESIWNTVI 156
Query: 187 HTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQD 246
T RS+ KRLFSRMI +YD H P+K++E++ DMEELGVRPDEDT RRI AF GQ+
Sbjct: 157 QTHMRSVPKRLFSRMILMYDIHQRPDKVLEIYTDMEELGVRPDEDTARRIGKAFVAFGQE 216
Query: 247 DKQKLVLKKYLSKWKYIHFKGERVRVRRDA 276
+++K VL+KYL KWKYIHF GERVRVRRD
Sbjct: 217 EEEKHVLEKYLKKWKYIHFNGERVRVRRDG 246
>gi|359483806|ref|XP_002269512.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Vitis vinifera]
Length = 216
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 141/182 (77%), Positives = 152/182 (83%), Gaps = 9/182 (4%)
Query: 36 ATSNPHLKCFLNQNKQPPVSNSNANASKKNKLVVKVGKKEQHLWQKRDSAGSGQKALNLV 95
TS H+KC N PP + + + ++ KVGKKE HLW+KRDS GSGQKALNLV
Sbjct: 41 VTSMRHVKCCHN----PP-----SYRAVEKEISKKVGKKEHHLWRKRDSIGSGQKALNLV 91
Query: 96 RIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQ 155
RIVSELPNEK AVYGALDKWTAWETEFPLIAAAKALRILRKR QW RVIQVAKWMLSKGQ
Sbjct: 92 RIVSELPNEKEAVYGALDKWTAWETEFPLIAAAKALRILRKRNQWKRVIQVAKWMLSKGQ 151
Query: 156 GATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKII 215
GATMGTYDTLLLAFD D R DEAESLWNMILHT TRSISK+LFSRMISLYDHHDM +K+I
Sbjct: 152 GATMGTYDTLLLAFDMDWRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDMRDKVI 211
Query: 216 EV 217
E+
Sbjct: 212 EM 213
>gi|414887055|tpg|DAA63069.1| TPA: EMB1417 [Zea mays]
Length = 192
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 122/179 (68%), Positives = 148/179 (82%)
Query: 98 VSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGA 157
VS+LPNE+ A+YGALDKW+A+E EFP+IAAAKAL +L++R QWLR+IQV KW++SKGQ
Sbjct: 11 VSKLPNEREAIYGALDKWSAFEPEFPIIAAAKALGMLKRRRQWLRIIQVTKWLMSKGQVL 70
Query: 158 TMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEV 217
T TYDTLLLA D R DEAES+WN ++ T TRS+ KRLFSRMI +YD H P+K++E+
Sbjct: 71 TWTTYDTLLLALLMDKRVDEAESVWNTVIQTHTRSVPKRLFSRMILIYDIHQRPDKVLEI 130
Query: 218 FADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKWKYIHFKGERVRVRRDA 276
FADMEELGVRPD+DTVRRI AF GQ++K+K VL+KYL KWKYIHF GERVRVRRD
Sbjct: 131 FADMEELGVRPDKDTVRRIGKAFVASGQEEKEKHVLEKYLKKWKYIHFNGERVRVRRDG 189
>gi|414887054|tpg|DAA63068.1| TPA: hypothetical protein ZEAMMB73_902452 [Zea mays]
Length = 225
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/212 (57%), Positives = 148/212 (69%), Gaps = 33/212 (15%)
Query: 98 VSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGA 157
VS+LPNE+ A+YGALDKW+A+E EFP+IAAAKAL +L++R QWLR+IQV KW++SKGQ
Sbjct: 11 VSKLPNEREAIYGALDKWSAFEPEFPIIAAAKALGMLKRRRQWLRIIQVTKWLMSKGQVL 70
Query: 158 TMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIE- 216
T TYDTLLLA D R DEAES+WN ++ T TRS+ KRLFSRMI +YD H P+K++E
Sbjct: 71 TWTTYDTLLLALLMDKRVDEAESVWNTVIQTHTRSVPKRLFSRMILIYDIHQRPDKVLES 130
Query: 217 --------------------------------VFADMEELGVRPDEDTVRRIASAFQRVG 244
+FADMEELGVRPD+DTVRRI AF G
Sbjct: 131 CAVQCSRLSSIHVVTVTVTHLVLFMEPNHKRQIFADMEELGVRPDKDTVRRIGKAFVASG 190
Query: 245 QDDKQKLVLKKYLSKWKYIHFKGERVRVRRDA 276
Q++K+K VL+KYL KWKYIHF GERVRVRRD
Sbjct: 191 QEEKEKHVLEKYLKKWKYIHFNGERVRVRRDG 222
>gi|226712502|gb|ACO76260.1| At4g18975-like protein [Capsella grandiflora]
gi|226712504|gb|ACO76261.1| At4g18975-like protein [Capsella grandiflora]
gi|226712510|gb|ACO76264.1| At4g18975-like protein [Capsella grandiflora]
gi|226712512|gb|ACO76265.1| At4g18975-like protein [Capsella grandiflora]
gi|226712514|gb|ACO76266.1| At4g18975-like protein [Capsella grandiflora]
gi|226712516|gb|ACO76267.1| At4g18975-like protein [Capsella grandiflora]
gi|226712518|gb|ACO76268.1| At4g18975-like protein [Capsella grandiflora]
Length = 152
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/141 (81%), Positives = 126/141 (89%)
Query: 76 QHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILR 135
HLW+K DSAGSGQKALNLVR++S L NEK AVYGALDKW AWE EFP+IAAAKAL+ILR
Sbjct: 12 HHLWKKNDSAGSGQKALNLVRMLSGLSNEKEAVYGALDKWVAWEVEFPIIAAAKALQILR 71
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
KR QW RVIQVAKWMLSKGQGATMGTYDTLLLAFD D RADEAESLWNMILHT TRSI +
Sbjct: 72 KRSQWHRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDERADEAESLWNMILHTHTRSIPR 131
Query: 196 RLFSRMISLYDHHDMPNKIIE 216
RLF+RMI+LY HHD+ +K+IE
Sbjct: 132 RLFARMIALYSHHDLHDKVIE 152
>gi|226712452|gb|ACO76235.1| At4g18975-like protein [Capsella rubella]
gi|226712454|gb|ACO76236.1| At4g18975-like protein [Capsella rubella]
gi|226712456|gb|ACO76237.1| At4g18975-like protein [Capsella rubella]
gi|226712458|gb|ACO76238.1| At4g18975-like protein [Capsella rubella]
gi|226712460|gb|ACO76239.1| At4g18975-like protein [Capsella rubella]
gi|226712462|gb|ACO76240.1| At4g18975-like protein [Capsella rubella]
gi|226712464|gb|ACO76241.1| At4g18975-like protein [Capsella rubella]
gi|226712466|gb|ACO76242.1| At4g18975-like protein [Capsella rubella]
gi|226712468|gb|ACO76243.1| At4g18975-like protein [Capsella rubella]
gi|226712470|gb|ACO76244.1| At4g18975-like protein [Capsella rubella]
gi|226712472|gb|ACO76245.1| At4g18975-like protein [Capsella rubella]
gi|226712474|gb|ACO76246.1| At4g18975-like protein [Capsella rubella]
gi|226712476|gb|ACO76247.1| At4g18975-like protein [Capsella rubella]
gi|226712478|gb|ACO76248.1| At4g18975-like protein [Capsella rubella]
gi|226712480|gb|ACO76249.1| At4g18975-like protein [Capsella rubella]
gi|226712482|gb|ACO76250.1| At4g18975-like protein [Capsella rubella]
gi|226712484|gb|ACO76251.1| At4g18975-like protein [Capsella rubella]
gi|226712486|gb|ACO76252.1| At4g18975-like protein [Capsella rubella]
gi|226712488|gb|ACO76253.1| At4g18975-like protein [Capsella rubella]
gi|226712490|gb|ACO76254.1| At4g18975-like protein [Capsella rubella]
gi|226712492|gb|ACO76255.1| At4g18975-like protein [Capsella rubella]
gi|226712494|gb|ACO76256.1| At4g18975-like protein [Capsella rubella]
gi|226712496|gb|ACO76257.1| At4g18975-like protein [Capsella rubella]
gi|226712498|gb|ACO76258.1| At4g18975-like protein [Capsella rubella]
gi|226712500|gb|ACO76259.1| At4g18975-like protein [Capsella rubella]
Length = 152
Score = 239 bits (611), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 114/141 (80%), Positives = 126/141 (89%)
Query: 76 QHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILR 135
HLW+K DSAGSGQKALNLVR++S L NEK AVYGALDKW AWE EFP+IAAAKAL+ILR
Sbjct: 12 HHLWKKNDSAGSGQKALNLVRMLSGLSNEKEAVYGALDKWVAWEVEFPIIAAAKALQILR 71
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
KR QW RVIQVAKWMLSKGQGATMGTYDTLLLAFD D RADEAESLWNMIL+T TRSI +
Sbjct: 72 KRSQWHRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDERADEAESLWNMILNTHTRSIPR 131
Query: 196 RLFSRMISLYDHHDMPNKIIE 216
RLF+RMI+LY HHD+ +K+IE
Sbjct: 132 RLFARMIALYSHHDLHDKVIE 152
>gi|226712506|gb|ACO76262.1| At4g18975-like protein [Capsella grandiflora]
gi|226712508|gb|ACO76263.1| At4g18975-like protein [Capsella grandiflora]
Length = 152
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/141 (80%), Positives = 125/141 (88%)
Query: 76 QHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILR 135
HLW+K DSAGSGQKALNLVR++S L NEK AVYGALDKW AWE EFP+IAAAKAL+ILR
Sbjct: 12 HHLWKKNDSAGSGQKALNLVRMLSGLSNEKEAVYGALDKWVAWEVEFPIIAAAKALQILR 71
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
KR QW RVIQVAKWMLSKGQGATMGTYDTLLLAFD D RA EAESLWNMILHT TRSI +
Sbjct: 72 KRSQWHRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDERAYEAESLWNMILHTHTRSIPR 131
Query: 196 RLFSRMISLYDHHDMPNKIIE 216
RLF+RMI+LY HHD+ +K+IE
Sbjct: 132 RLFARMIALYSHHDLHDKVIE 152
>gi|414887017|tpg|DAA63031.1| TPA: EMB1417, mRNA [Zea mays]
Length = 147
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 115/144 (79%)
Query: 133 ILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRS 192
+L++R QWLR+IQV KW++SKGQ T TYDTLLLA D R DEAES+WN ++ T TRS
Sbjct: 1 MLKRRRQWLRIIQVTKWLMSKGQVLTWTTYDTLLLALLMDKRVDEAESVWNTVIQTHTRS 60
Query: 193 ISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLV 252
+ KRLFSRMI +YD H P+K++E+FADMEELGVRPDEDT RRI AF GQ++K+K V
Sbjct: 61 VPKRLFSRMILIYDIHQRPDKVLEIFADMEELGVRPDEDTARRIGKAFVASGQEEKEKHV 120
Query: 253 LKKYLSKWKYIHFKGERVRVRRDA 276
L+KYL KWKYIHF GERVRVRRD
Sbjct: 121 LEKYLKKWKYIHFNGERVRVRRDG 144
>gi|449445975|ref|XP_004140747.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Cucumis sativus]
Length = 331
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 134/208 (64%), Gaps = 1/208 (0%)
Query: 78 LWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKR 137
+W+ + G+ KA LV V L N K VYGALD + AWE EFPLI KAL+ L +
Sbjct: 60 VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQ 119
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
+W R+IQ+ KWMLSKGQG TMG+Y TLL A +D R DEAE LWN + SI +
Sbjct: 120 REWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIF 179
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKY- 256
F +MISLY M +K+ EVFADMEELGV+P+ V ++ + FQ +G DK K ++KKY
Sbjct: 180 FHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYP 239
Query: 257 LSKWKYIHFKGERVRVRRDAWYESGSTN 284
KW+Y + KG+RV++R E+G++N
Sbjct: 240 PPKWEYRYIKGKRVKIRAKYLSENGNSN 267
>gi|225464623|ref|XP_002274318.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21190
[Vitis vinifera]
gi|302143769|emb|CBI22630.3| unnamed protein product [Vitis vinifera]
Length = 295
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/197 (47%), Positives = 126/197 (63%), Gaps = 1/197 (0%)
Query: 78 LWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKR 137
+W+ R G+ K+ LV + L N K VYGALD + AWE EFPLI KAL+ L +
Sbjct: 42 VWKTRQRIGTISKSAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEDQ 101
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
+W R+IQV KWMLSKGQG TMG+Y TLL A +D R DEAE LW + S+ +
Sbjct: 102 KEWKRIIQVTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWTKLFSENLESLPRVF 161
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKY- 256
+ +MIS+Y DM K+ E+FADMEELG+RP+ V+ + FQ++G DK + + KKY
Sbjct: 162 YDKMISIYYRRDMHEKMFEIFADMEELGIRPNTSIVKMVGDVFQKLGMLDKYEKLQKKYP 221
Query: 257 LSKWKYIHFKGERVRVR 273
KW+Y + KG+RVR+R
Sbjct: 222 PPKWEYRYIKGKRVRIR 238
>gi|449485591|ref|XP_004157218.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Cucumis sativus]
Length = 258
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/189 (50%), Positives = 125/189 (66%), Gaps = 1/189 (0%)
Query: 97 IVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQG 156
+V L N K VYGALD + AWE EFPLI KAL+ L + +W R+IQ+ KWMLSKGQG
Sbjct: 6 MVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQG 65
Query: 157 ATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIE 216
TMG+Y TLL A +D R DEAE LWN + SI + F +MISLY M +K+ E
Sbjct: 66 RTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFE 125
Query: 217 VFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKY-LSKWKYIHFKGERVRVRRD 275
VFADMEELGV+P+ V ++ + FQ +G DK K ++KKY KW+Y + KG+RV++R
Sbjct: 126 VFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAK 185
Query: 276 AWYESGSTN 284
E+G++N
Sbjct: 186 YLSENGNSN 194
>gi|356559734|ref|XP_003548152.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Glycine max]
Length = 343
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/197 (48%), Positives = 123/197 (62%), Gaps = 1/197 (0%)
Query: 78 LWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKR 137
+W+ G+ KA LV + EL N K VYGALD + AWE EFPLI KAL+ L
Sbjct: 42 VWKTHKKIGTISKAAKLVNSIKELSNVKEEVYGALDSYVAWELEFPLITVKKALKTLESE 101
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
+W RVIQV KWMLSKGQG TMG+Y TLL A +D R DEAE LW +L S+ +R
Sbjct: 102 QEWKRVIQVTKWMLSKGQGKTMGSYFTLLNALVEDDRLDEAEELWTKLLMQYMESLPRRF 161
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK-QKLVLKKY 256
F +MIS+Y M K+ E+FADMEEL +RP+ V I AF+ +G DK QKL K
Sbjct: 162 FDKMISIYHKRGMHEKMFEIFADMEELCLRPNIAVVSMIGDAFKELGMLDKYQKLHAKYP 221
Query: 257 LSKWKYIHFKGERVRVR 273
+W+Y + +G+RV+V+
Sbjct: 222 PPQWEYRYIRGKRVKVK 238
>gi|224134835|ref|XP_002327501.1| predicted protein [Populus trichocarpa]
gi|222836055|gb|EEE74476.1| predicted protein [Populus trichocarpa]
Length = 229
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 128/209 (61%), Gaps = 1/209 (0%)
Query: 77 HLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRK 136
+W+ + G+ K+ LV + L N K VYGALD + AWE EFPLIA KALR L +
Sbjct: 13 RVWKTKRRIGTISKSAKLVDCIKGLSNVKEEVYGALDSFVAWELEFPLIAVKKALRALEE 72
Query: 137 RGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKR 196
+ +W R+IQV KWMLSKGQG TMGTY TL+ A +D R DE E LW + +
Sbjct: 73 QQEWKRIIQVTKWMLSKGQGRTMGTYFTLMNALAEDGRLDEVEELWTKLFSQYLEGTPRM 132
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK-QKLVLKK 255
+F +MIS+Y DM ++I E+FADMEELG+RP V + + FQR+G DK +KL K
Sbjct: 133 MFDKMISIYYKRDMHDQIFEIFADMEELGLRPSVSIVNMVGNVFQRLGMMDKYEKLKKKY 192
Query: 256 YLSKWKYIHFKGERVRVRRDAWYESGSTN 284
KW Y + KG+RVRVR E+G N
Sbjct: 193 PPPKWIYRYIKGKRVRVRAKNDNEAGDVN 221
>gi|255545154|ref|XP_002513638.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547546|gb|EEF49041.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 359
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 120/198 (60%), Gaps = 1/198 (0%)
Query: 77 HLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRK 136
+W+ + G+ K+ LV + L N K VYGALD AWE EFPLIA KAL+ L
Sbjct: 74 RVWKTKPRIGTISKSAKLVECIKGLSNVKEEVYGALDSLIAWELEFPLIAVKKALKTLEN 133
Query: 137 RGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKR 196
+W R+IQV KWMLSKGQG TMGTY TLL A +D R DEAE LW + +
Sbjct: 134 EQEWKRIIQVIKWMLSKGQGRTMGTYFTLLNALAEDERLDEAEELWTKLFSDNLEGTPRN 193
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQK-LVLKK 255
F +MIS+Y +M K+ E+FADMEELGVRP V + S FQ++G DK + L K
Sbjct: 194 FFDKMISIYYKREMHEKMFEIFADMEELGVRPSVSIVNMMGSVFQKLGMLDKYRKLKKKY 253
Query: 256 YLSKWKYIHFKGERVRVR 273
KW+Y + KG+RVR+R
Sbjct: 254 PPPKWEYRYIKGKRVRLR 271
>gi|18415645|ref|NP_567622.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75246109|sp|Q8LG95.1|PP332_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g21190; AltName: Full=Protein EMBRYO DEFECTIVE 1417
gi|21618230|gb|AAM67280.1| unknown [Arabidopsis thaliana]
gi|51969238|dbj|BAD43311.1| putative protein [Arabidopsis thaliana]
gi|51971351|dbj|BAD44340.1| putative protein [Arabidopsis thaliana]
gi|51971365|dbj|BAD44347.1| putative protein [Arabidopsis thaliana]
gi|332659017|gb|AEE84417.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 307
Score = 183 bits (464), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 94/224 (41%), Positives = 134/224 (59%), Gaps = 5/224 (2%)
Query: 55 SNSNANASKKNKLVVKVGK----KEQHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYG 110
S++ K N +VV + + +W+ R G+ KA ++ + L N K VYG
Sbjct: 18 SSTKLFTKKPNNVVVCAARGPRPRSPRVWKTRKRIGTISKAAKMIACIKGLSNVKEEVYG 77
Query: 111 ALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFD 170
ALD + AWE EFPL+ KAL IL +W ++IQV KWMLSKGQG TMGTY +LL A
Sbjct: 78 ALDSFIAWELEFPLVIVKKALVILEDEKEWKKIIQVTKWMLSKGQGRTMGTYFSLLNALA 137
Query: 171 KDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDE 230
+D+R DEAE LWN + ++ F++MIS+Y DM K+ EVFADMEELGV+P+
Sbjct: 138 EDNRLDEAEELWNKLFMEHLEGTPRKFFNKMISIYYKRDMHQKLFEVFADMEELGVKPNV 197
Query: 231 DTVRRIASAFQRVGQDDKQKLVLKKY-LSKWKYIHFKGERVRVR 273
V + F ++ DK + ++KKY +W++ + KG RV+V+
Sbjct: 198 AIVSMVGKVFVKLEMKDKYEKLMKKYPPPQWEFRYIKGRRVKVK 241
>gi|297799952|ref|XP_002867860.1| EMB1417 [Arabidopsis lyrata subsp. lyrata]
gi|297313696|gb|EFH44119.1| EMB1417 [Arabidopsis lyrata subsp. lyrata]
Length = 317
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/244 (40%), Positives = 144/244 (59%), Gaps = 11/244 (4%)
Query: 35 LATSNPHLKCFLNQNKQPPVSNSNANASKKNKLVVKVGK----KEQHLWQKRDSAGSGQK 90
L S P+L L Q K+ S++ + + N +VV + + +W+ R G+ K
Sbjct: 4 LRYSLPYL---LLQTKE---SSTKLFSKRPNNVVVCAARGPRPRSPRVWKTRKRIGTISK 57
Query: 91 ALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWM 150
A ++ + L N K VYGALD + AWE EFPL+ KAL IL +W ++IQV KWM
Sbjct: 58 AAKMIACIKGLSNVKEEVYGALDSFIAWELEFPLVIVKKALVILEDEKEWKKIIQVTKWM 117
Query: 151 LSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDM 210
LSKGQG TMGTY +LL A +D+R DEAE LWN + ++ F++MIS+Y DM
Sbjct: 118 LSKGQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKFFNKMISIYYKRDM 177
Query: 211 PNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKY-LSKWKYIHFKGER 269
K+ EVFADMEELGV+P+ V + F ++ DK + ++KKY +W++ + KG R
Sbjct: 178 HQKLFEVFADMEELGVKPNIAIVSMVGKVFVKLEMKDKYEKLMKKYPPPQWEFRYIKGRR 237
Query: 270 VRVR 273
V+V+
Sbjct: 238 VKVK 241
>gi|226498486|ref|NP_001150239.1| EMB1417 [Zea mays]
gi|195637738|gb|ACG38337.1| EMB1417 [Zea mays]
Length = 296
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 122/197 (61%), Gaps = 1/197 (0%)
Query: 78 LWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKR 137
+W+ R G+ K+ LV + L N K VYGALD + AWE EFPLI KAL+ L
Sbjct: 44 VWKTRKKIGTISKSQKLVECIKGLSNVKEEVYGALDSFVAWELEFPLIVVKKALKKLEDE 103
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
+W R+IQV KWM +KGQG TMG+Y TLL A +D R +EAE L+ M+ + +
Sbjct: 104 KEWKRIIQVIKWMFNKGQGKTMGSYYTLLNALIEDGRIEEAEELFGMVFSRYMEGLPRTF 163
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKY- 256
F RMIS Y + + + + E+FADMEELGVRPD +R + FQ++ DK + + KKY
Sbjct: 164 FMRMISFYYNVEAYDNMFEIFADMEELGVRPDGSIIRMLGDVFQKLEMMDKYEKLKKKYR 223
Query: 257 LSKWKYIHFKGERVRVR 273
KW+Y H KG+R+R+R
Sbjct: 224 PPKWEYRHIKGKRIRIR 240
>gi|356530814|ref|XP_003533975.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Glycine max]
Length = 343
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/197 (47%), Positives = 121/197 (61%), Gaps = 1/197 (0%)
Query: 78 LWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKR 137
+W+ G+ KA LV+ + EL N K VYGALD + AWE EFPLI KAL+ L
Sbjct: 42 VWKTHKKIGTISKAAKLVKSIKELSNVKEEVYGALDSYVAWELEFPLITVKKALKTLEFE 101
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
W RVIQ+ KWMLSKGQG TMG+Y TLL A +D R DEAE LW +L S+ +R
Sbjct: 102 QDWKRVIQITKWMLSKGQGKTMGSYFTLLNALVEDDRLDEAEELWTKLLMQYMESLPRRF 161
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQ-KLVLKKY 256
F +MIS+Y M K+ E+FADMEEL +RP+ V I AF+ G DK KL K
Sbjct: 162 FDKMISIYHKRGMHEKMFEIFADMEELCLRPNIVVVSMIGDAFKERGMLDKYLKLHAKYP 221
Query: 257 LSKWKYIHFKGERVRVR 273
+W+Y + +G+RV+V+
Sbjct: 222 PPQWEYRYIRGKRVKVK 238
>gi|255646324|gb|ACU23645.1| unknown [Glycine max]
Length = 343
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/197 (47%), Positives = 121/197 (61%), Gaps = 1/197 (0%)
Query: 78 LWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKR 137
+W+ G+ KA LV+ + EL N K VYGALD + AWE EFPLI KAL+ L
Sbjct: 42 VWKTHKKIGTISKAAKLVKSIKELSNVKEEVYGALDSYVAWELEFPLITVKKALKTLEFE 101
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
W RVIQ+ KWMLSKGQG TMG+Y TLL A +D R DEAE LW +L S+ +R
Sbjct: 102 QDWKRVIQITKWMLSKGQGKTMGSYFTLLNALVEDDRLDEAEELWTKLLMQYMESLPRRF 161
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQ-KLVLKKY 256
F +MIS+Y M K+ E+FADMEEL +RP+ V I AF+ G DK KL K
Sbjct: 162 FDKMISIYHKRGMHEKMFEIFADMEELCLRPNIVVVSMIGDAFKERGTLDKYLKLHAKYP 221
Query: 257 LSKWKYIHFKGERVRVR 273
+W+Y + +G+RV+V+
Sbjct: 222 PPQWEYRYIRGKRVKVK 238
>gi|357136512|ref|XP_003569848.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Brachypodium distachyon]
Length = 296
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 122/198 (61%), Gaps = 1/198 (0%)
Query: 77 HLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRK 136
+W+ G+ K+ LV+ + +L N K VYGALD + AWE EFPLIA KAL+ L
Sbjct: 43 RVWKADKRIGTVSKSQKLVKCIKDLSNVKEEVYGALDSFVAWELEFPLIAVKKALKTLED 102
Query: 137 RGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKR 196
+W R+IQV KWM +KGQG TMG+Y TLL A +D R +EAE L+ I + +
Sbjct: 103 EKEWKRIIQVIKWMFNKGQGKTMGSYYTLLNALIEDGRVEEAEELFGKIFSRYMEGLPRT 162
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
F R+ISLY KI EVFADMEELGVRPD VR + FQ++ DK + ++KKY
Sbjct: 163 FFMRIISLYYSLGSYQKIFEVFADMEELGVRPDRSIVRMLGQVFQKLEMFDKYEKLIKKY 222
Query: 257 -LSKWKYIHFKGERVRVR 273
K +Y + KG+R+R++
Sbjct: 223 PPPKIEYRYIKGKRIRLK 240
>gi|302802253|ref|XP_002982882.1| hypothetical protein SELMODRAFT_117025 [Selaginella moellendorffii]
gi|300149472|gb|EFJ16127.1| hypothetical protein SELMODRAFT_117025 [Selaginella moellendorffii]
Length = 296
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 88/205 (42%), Positives = 134/205 (65%), Gaps = 1/205 (0%)
Query: 79 WQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRG 138
W+K GS KA+NL++ V+ L + K +YGALD W+A+E +FP+ KALRILR +
Sbjct: 4 WKKTAKRGSSLKAVNLIKCVTNLSDCKEDIYGALDAWSAFEVDFPIEPVKKALRILRDQW 63
Query: 139 QWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLF 198
QW RVIQV+KWMLSKG G TM TY L++A +K+ R +EAE +++ + ++ + F
Sbjct: 64 QWKRVIQVSKWMLSKGHGKTMATYQLLIVALEKEDRIEEAEEVFHGVFRRYLDALPRSHF 123
Query: 199 SRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKY-L 257
S M+ +Y+ M K++++FADMEEL VRPD+ V +A + +VG +K + V +KY L
Sbjct: 124 SLMMGIYNRAGMYEKLLDLFADMEELNVRPDQGLVEMVAEVYFKVGMPEKSEKVREKYPL 183
Query: 258 SKWKYIHFKGERVRVRRDAWYESGS 282
+++Y + KG R+RV Y++ S
Sbjct: 184 RRYEYRYLKGRRIRVPTKRLYQAES 208
>gi|218189084|gb|EEC71511.1| hypothetical protein OsI_03797 [Oryza sativa Indica Group]
Length = 295
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 94/198 (47%), Positives = 120/198 (60%), Gaps = 1/198 (0%)
Query: 77 HLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRK 136
+W+ R G+ K+ LV V L N K VYGALD + AWE EFPLIA KAL+ L
Sbjct: 43 RVWKTRKRIGTVSKSQKLVECVKGLSNVKEEVYGALDSFVAWELEFPLIAVKKALKTLED 102
Query: 137 RGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKR 196
+W R+IQV KWM +KGQG TMG+Y TLL A +D R +EAE L+ + +
Sbjct: 103 EKEWKRIIQVIKWMFNKGQGKTMGSYYTLLNALIEDGRVEEAEELYGKTFSRYLEGLPRT 162
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQ-KLVLKK 255
F RMISLY + K+ E+FADMEELGVRPD +R + FQ++G DK KL K
Sbjct: 163 FFMRMISLYYRLESYQKMFEIFADMEELGVRPDGSIIRMLGEVFQKLGMLDKYVKLKKKY 222
Query: 256 YLSKWKYIHFKGERVRVR 273
KW+Y H KG+R+RV+
Sbjct: 223 PPPKWEYRHIKGKRIRVK 240
>gi|2911076|emb|CAA17538.1| putative protein [Arabidopsis thaliana]
gi|7268916|emb|CAB79119.1| putative protein [Arabidopsis thaliana]
Length = 325
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 124/204 (60%), Gaps = 7/204 (3%)
Query: 77 HLWQKRDSAGSGQKALNLVRIV------SELPNEKHAVYGALDKWTAWETEFPLIAAAKA 130
+W+ R G+ KA ++ V L N K VYGALD + AWE EFPL+ KA
Sbjct: 56 RVWKTRKRIGTISKAAKMIACVMLSSYIKGLSNVKEEVYGALDSFIAWELEFPLVIVKKA 115
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
L IL +W ++IQV KWMLSKGQG TMGTY +LL A +D+R DEAE LWN +
Sbjct: 116 LVILEDEKEWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHL 175
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQK 250
++ F++MIS+Y DM K+ EVFADMEELGV+P+ V + F ++ DK +
Sbjct: 176 EGTPRKFFNKMISIYYKRDMHQKLFEVFADMEELGVKPNVAIVSMVGKVFVKLEMKDKYE 235
Query: 251 LVLKKY-LSKWKYIHFKGERVRVR 273
++KKY +W++ + KG RV+V+
Sbjct: 236 KLMKKYPPPQWEFRYIKGRRVKVK 259
>gi|302818634|ref|XP_002990990.1| hypothetical protein SELMODRAFT_47850 [Selaginella moellendorffii]
gi|300141321|gb|EFJ08034.1| hypothetical protein SELMODRAFT_47850 [Selaginella moellendorffii]
Length = 195
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 130/195 (66%), Gaps = 1/195 (0%)
Query: 79 WQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRG 138
W+K GS KA+NL++ ++ L + K +YGALD W+A+E +FP+ KALRILR +
Sbjct: 1 WKKTAKRGSSLKAVNLIKCIANLSDCKEDIYGALDAWSAFEVDFPIEPVKKALRILRDQW 60
Query: 139 QWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLF 198
QW RVIQV+KWMLSKG G TM TY L++A +K+ R +EAE +++ + ++ + F
Sbjct: 61 QWKRVIQVSKWMLSKGHGKTMATYQLLIVALEKEDRIEEAEEVFHGVFRRYLDALPRSHF 120
Query: 199 SRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKY-L 257
S M+ +Y+ M K++++FADMEEL VRPD+ V +A + +VG +K + V +KY L
Sbjct: 121 SLMMGIYNRAGMYEKLLDLFADMEELNVRPDQGLVEMVAEVYFKVGMPEKSEKVREKYPL 180
Query: 258 SKWKYIHFKGERVRV 272
+++Y + KG R+RV
Sbjct: 181 RRYEYRYLKGRRIRV 195
>gi|222619272|gb|EEE55404.1| hypothetical protein OsJ_03510 [Oryza sativa Japonica Group]
Length = 295
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/198 (47%), Positives = 119/198 (60%), Gaps = 1/198 (0%)
Query: 77 HLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRK 136
+W+ R G+ K+ LV V L N K VYGALD + AWE EFPLIA KAL+ L
Sbjct: 43 RVWKTRKRIGTVSKSQKLVECVKGLSNVKEEVYGALDSFVAWELEFPLIAVKKALKTLED 102
Query: 137 RGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKR 196
+W R+IQV KWM +KGQG TMG+Y TLL A +D R +EAE L+ I +
Sbjct: 103 EKEWKRIIQVIKWMFNKGQGKTMGSYYTLLNALIEDGRVEEAEELYGKIFSRYLEGLPHT 162
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQ-KLVLKK 255
F RMISLY + K+ E+FADMEELGVRPD +R + FQ++G DK KL K
Sbjct: 163 FFMRMISLYYRLESYQKMFEIFADMEELGVRPDGSIIRMLGEVFQKLGMLDKYVKLKKKY 222
Query: 256 YLSKWKYIHFKGERVRVR 273
KW+Y KG+R+RV+
Sbjct: 223 PPPKWEYRRIKGKRIRVK 240
>gi|413952394|gb|AFW85043.1| EMB1417 [Zea mays]
Length = 296
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 120/197 (60%), Gaps = 1/197 (0%)
Query: 78 LWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKR 137
+W+ R G+ K+ LV + L N K VYGALD + AWE EFPLI KAL+ L
Sbjct: 44 VWKTRKKIGTISKSQKLVECIKGLSNVKEEVYGALDSFVAWELEFPLIVVKKALKKLEDE 103
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
+W R+IQV KWM +KGQG TMG+Y TLL A +D R +EAE L+ M+ + +
Sbjct: 104 KEWKRIIQVIKWMFNKGQGKTMGSYYTLLNALIEDGRIEEAEELFGMVFSRYMEGLPRTF 163
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK-QKLVLKKY 256
F RMIS Y + +K+ E+FADMEELGVRPD +R + FQ++ DK +KL K
Sbjct: 164 FMRMISFYYSVEAYDKMFEIFADMEELGVRPDGSIIRMLGDVFQKLEMMDKYEKLKKKYP 223
Query: 257 LSKWKYIHFKGERVRVR 273
KW Y H KG+R+R+R
Sbjct: 224 PPKWDYRHIKGKRIRIR 240
>gi|226493814|ref|NP_001140314.1| uncharacterized protein LOC100272359 [Zea mays]
gi|194698952|gb|ACF83560.1| unknown [Zea mays]
gi|224032859|gb|ACN35505.1| unknown [Zea mays]
gi|414880433|tpg|DAA57564.1| TPA: hypothetical protein ZEAMMB73_276663 [Zea mays]
gi|414880434|tpg|DAA57565.1| TPA: hypothetical protein ZEAMMB73_276663 [Zea mays]
gi|414880435|tpg|DAA57566.1| TPA: hypothetical protein ZEAMMB73_276663 [Zea mays]
Length = 296
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/197 (45%), Positives = 120/197 (60%), Gaps = 1/197 (0%)
Query: 78 LWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKR 137
+W+ R G+ K+ LV + L N K VYGALD + AWE EFPLI KAL+ L
Sbjct: 44 VWKTRKKIGTISKSQKLVECIKGLSNVKEEVYGALDSFVAWELEFPLIVVKKALKKLEDE 103
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
+W R+IQV KWM +KGQG TMG+Y TLL A +D R +EAE L+ M+ + +
Sbjct: 104 KEWKRIIQVIKWMFNKGQGKTMGSYYTLLNALIEDGRIEEAEELFRMVFSRYMEGLPRTF 163
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK-QKLVLKKY 256
F R+IS Y +K+ E+FADMEELGVRPD +R + FQ++ DK +KL K
Sbjct: 164 FMRIISFYYSAGEHDKMFEIFADMEELGVRPDGSIIRMLGDVFQKIEMMDKYEKLKKKYP 223
Query: 257 LSKWKYIHFKGERVRVR 273
KW+Y + KG+R+R+R
Sbjct: 224 PPKWEYRYIKGKRIRIR 240
>gi|242058741|ref|XP_002458516.1| hypothetical protein SORBIDRAFT_03g035040 [Sorghum bicolor]
gi|241930491|gb|EES03636.1| hypothetical protein SORBIDRAFT_03g035040 [Sorghum bicolor]
Length = 296
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/197 (45%), Positives = 120/197 (60%), Gaps = 1/197 (0%)
Query: 78 LWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKR 137
+W+ + G+ K+ LV + L N K VYGALD + AWE EFPLI KAL+ L
Sbjct: 44 VWKTQKKIGTISKSQKLVECIKGLSNVKEEVYGALDSFVAWELEFPLIVVKKALQKLEGE 103
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
+W R+IQV KWM +KGQG TMG+Y TLL A +D R +EAE L+ M+ + +
Sbjct: 104 KEWKRIIQVIKWMFNKGQGKTMGSYYTLLNALIEDGRIEEAEELFGMVFSRYMEGLPRTF 163
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK-QKLVLKKY 256
F RMIS Y +K+ E+FADMEELGVRPD +R + FQ++ DK +KL K
Sbjct: 164 FMRMISFYYSVGAYDKMFEIFADMEELGVRPDGSIIRMLGDVFQKLEMMDKYEKLKKKYP 223
Query: 257 LSKWKYIHFKGERVRVR 273
KW+Y + KG+R+R+R
Sbjct: 224 PPKWEYRYIKGKRIRMR 240
>gi|168057514|ref|XP_001780759.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667777|gb|EDQ54398.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 204
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 129/201 (64%), Gaps = 1/201 (0%)
Query: 74 KEQHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRI 133
+ + W+ + GS KA LV ++ E P K +YGALD + AWE EFP+IA KA+
Sbjct: 4 RRKRAWKTTNRKGSFAKARKLVDLIDETPPAKEDIYGALDAFVAWELEFPIIAIKKAMAF 63
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
+ + +W ++IQV+KWMLSKGQG TMGT+ LL A D + R +EA++L+ +L +
Sbjct: 64 MAEEQKWRQIIQVSKWMLSKGQGKTMGTFTLLLEALDHEGRVEEADALFEKLLTEHEDAT 123
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
+ +F+ +I++++ H+ P ++++VFADMEEL ++PD TV R+A ++ +G + + V
Sbjct: 124 PRYMFTVVIAMFERHNNPRRLLQVFADMEELEIKPDMVTVERVARTYRSIGLMKRAEAVE 183
Query: 254 KKY-LSKWKYIHFKGERVRVR 273
KY +KW + + +G+ RVR
Sbjct: 184 AKYPPTKWGFRYKRGKAYRVR 204
>gi|302790525|ref|XP_002977030.1| hypothetical protein SELMODRAFT_443396 [Selaginella moellendorffii]
gi|300155508|gb|EFJ22140.1| hypothetical protein SELMODRAFT_443396 [Selaginella moellendorffii]
Length = 367
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 106/178 (59%)
Query: 89 QKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAK 148
Q+A +LV V LP+ K ++ A D W AWE FPL A L + QW RVI V K
Sbjct: 74 QRARDLVDAVLPLPDVKEEIWAACDTWIAWELRFPLHTIKMATHRLFRLKQWRRVIHVIK 133
Query: 149 WMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHH 208
WM SKG G TM TY LL A D D R DE E +W+ + T+ S+ + +++RMI++YD
Sbjct: 134 WMFSKGHGFTMNTYGCLLRALDIDGRVDEVEHIWHTFVVTKQESVPRVMYARMITMYDRR 193
Query: 209 DMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKWKYIHFK 266
+P+K I++F ++E G RPD T+ RI ++++G +K +L+K+ ++I FK
Sbjct: 194 ALPDKAIKMFKELELSGTRPDPATIIRIGKIYEKLGFTNKTAELLEKHKPTKRFISFK 251
>gi|296089642|emb|CBI39461.3| unnamed protein product [Vitis vinifera]
Length = 296
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 129/237 (54%), Gaps = 17/237 (7%)
Query: 25 ASGFSLLT-TKLA-TSNPHLKCFLNQ--NKQPPVSNSNANASKKNKLVVKVGKKEQHLWQ 80
AS +S T T+++ TSN FL N QP +S +A+ H Q
Sbjct: 26 ASSYSTFTQTQMSDTSNVGEVAFLGGQCNNQPMYHDSGKDAA------------SVHKHQ 73
Query: 81 KRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQW 140
++ K LV + +L + K AVYGALD W AWE FP+ + + L L K QW
Sbjct: 74 IGENVSRKDKINFLVTTLLDLKDSKEAVYGALDAWVAWEQNFPIASLKRVLITLEKEQQW 133
Query: 141 LRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSR 200
RVIQV KWMLSKGQG TMGTY L+ A D DHRA+EA W + T S+ L R
Sbjct: 134 HRVIQVVKWMLSKGQGTTMGTYGQLIRALDMDHRAEEAHEFWVKKIGTDLHSVPWHLCHR 193
Query: 201 MISLYDHHDMPNKIIEVFADMEELGVRP-DEDTVRRIASAFQRVGQDDKQKLVLKKY 256
MIS+Y ++M ++++F +E +P D+ V+++A A++ +G ++++ + +KY
Sbjct: 194 MISVYYRNNMLENLVKLFKGLEAFDRKPQDKLVVKKVADAYEMLGLLEEKERIFEKY 250
>gi|225433730|ref|XP_002269673.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform 1 [Vitis vinifera]
Length = 300
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 129/237 (54%), Gaps = 17/237 (7%)
Query: 25 ASGFSLLT-TKLA-TSNPHLKCFLNQ--NKQPPVSNSNANASKKNKLVVKVGKKEQHLWQ 80
AS +S T T+++ TSN FL N QP +S +A+ H Q
Sbjct: 30 ASSYSTFTQTQMSDTSNVGEVAFLGGQCNNQPMYHDSGKDAA------------SVHKHQ 77
Query: 81 KRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQW 140
++ K LV + +L + K AVYGALD W AWE FP+ + + L L K QW
Sbjct: 78 IGENVSRKDKINFLVTTLLDLKDSKEAVYGALDAWVAWEQNFPIASLKRVLITLEKEQQW 137
Query: 141 LRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSR 200
RVIQV KWMLSKGQG TMGTY L+ A D DHRA+EA W + T S+ L R
Sbjct: 138 HRVIQVVKWMLSKGQGTTMGTYGQLIRALDMDHRAEEAHEFWVKKIGTDLHSVPWHLCHR 197
Query: 201 MISLYDHHDMPNKIIEVFADMEELGVRP-DEDTVRRIASAFQRVGQDDKQKLVLKKY 256
MIS+Y ++M ++++F +E +P D+ V+++A A++ +G ++++ + +KY
Sbjct: 198 MISVYYRNNMLENLVKLFKGLEAFDRKPQDKLVVKKVADAYEMLGLLEEKERIFEKY 254
>gi|302797721|ref|XP_002980621.1| hypothetical protein SELMODRAFT_420308 [Selaginella moellendorffii]
gi|300151627|gb|EFJ18272.1| hypothetical protein SELMODRAFT_420308 [Selaginella moellendorffii]
Length = 314
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 104/178 (58%)
Query: 89 QKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAK 148
Q+A +LV V LP+ K ++ A D W AWE FPL A L + QW RVI V K
Sbjct: 96 QRARDLVDAVLPLPDVKGEIWAACDTWIAWELRFPLHTIEMATHRLFRLKQWRRVIHVIK 155
Query: 149 WMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHH 208
WM SKG G TM TY LL A D D R DE E +W+ + T+ S+ + +++RMI+ YD
Sbjct: 156 WMFSKGHGFTMNTYGCLLRALDIDGRVDEVEHIWHTFVVTKQESVPRVMYARMITTYDRR 215
Query: 209 DMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKWKYIHFK 266
+P+K I++F ++E G RPD T+ +I ++++G +K +L+K+ +I FK
Sbjct: 216 ALPDKAIKMFKELELSGTRPDPATIIKIGKIYEKLGFTNKTAELLEKHKPTKTFISFK 273
>gi|255570717|ref|XP_002526313.1| conserved hypothetical protein [Ricinus communis]
gi|223534394|gb|EEF36102.1| conserved hypothetical protein [Ricinus communis]
Length = 300
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 98/153 (64%), Gaps = 1/153 (0%)
Query: 105 KHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDT 164
K AVYGALD W AWE FP+ + + L +L K QW +V+QV KWMLSKGQG TMGTY
Sbjct: 97 KEAVYGALDAWVAWEHNFPIASLKRVLILLEKEQQWHKVVQVIKWMLSKGQGNTMGTYGQ 156
Query: 165 LLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEEL 224
L+ A D DHRA+EA W + S+ +L RMIS+Y ++M ++++F +E
Sbjct: 157 LIRALDMDHRANEAHMFWLKKIGLDLHSVPWQLCHRMISVYYRNNMLESLVKLFKGLEAF 216
Query: 225 GVR-PDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
+ PD+ ++++A A++ +G ++++ VL+KY
Sbjct: 217 DRKPPDKSILQKVADAYEMLGMLEEKERVLQKY 249
>gi|242082674|ref|XP_002441762.1| hypothetical protein SORBIDRAFT_08g002000 [Sorghum bicolor]
gi|241942455|gb|EES15600.1| hypothetical protein SORBIDRAFT_08g002000 [Sorghum bicolor]
Length = 300
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 123/210 (58%), Gaps = 3/210 (1%)
Query: 48 QNKQPPVSNSNANASKKNKLVVKVGKKEQHLWQKRDSAGSGQKALNLVRIVSELPNEKHA 107
QN+ P + +++ GK E+ K + S +K LV + L + + A
Sbjct: 65 QNELEPTTPVKGTDVIIDRIRKSTGKLEEGPVGK--NLSSAEKRKFLVNTLLSLEDSREA 122
Query: 108 VYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLL 167
VYG LD W A+E +FPL + +AL +L K QW R++QV KWMLSKGQG TM TY+ L+
Sbjct: 123 VYGTLDAWVAFEQDFPLASLKQALSVLEKEEQWHRIVQVVKWMLSKGQGNTMRTYELLVC 182
Query: 168 AFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVR 227
A +KD+RA+EA +W + S+ R M+++Y ++ ++++++F ++E G +
Sbjct: 183 ALEKDNRAEEAHRIWQKKIGHDLHSVPWRFCRLMLAIYYRNNRLDRLMKLFKELEACGRK 242
Query: 228 -PDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
P +D +R++ A++ +G +++K++L KY
Sbjct: 243 PPSKDIIRKVEDAYEMLGLLEEKKVLLDKY 272
>gi|224140311|ref|XP_002323526.1| predicted protein [Populus trichocarpa]
gi|222868156|gb|EEF05287.1| predicted protein [Populus trichocarpa]
Length = 269
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 120/214 (56%), Gaps = 12/214 (5%)
Query: 47 NQNKQPPVSNSNANASKKNKLVVKVGKKEQHLWQKRDSAGSGQKALNLVRIVS---ELPN 103
N + P + N SKK+K+ + L + ++L + +V +L +
Sbjct: 10 NSRQNPRRNQIGDNVSKKDKI--------KFLITTVSTQNPNYQSLFICMVVFTLLDLND 61
Query: 104 EKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYD 163
K +VYGALD W AWE +FP+ + + L L K QW R++QV KWMLSKGQG TMGTY
Sbjct: 62 SKDSVYGALDAWVAWEQKFPIASIKQVLIALEKEQQWHRIVQVIKWMLSKGQGTTMGTYA 121
Query: 164 TLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEE 223
+ A D DHRA EA W + S+ +L +RMIS+Y ++M +I++F +E
Sbjct: 122 QFIRALDMDHRAKEAHEFWLKKIGRDLHSVPWQLCNRMISIYYRNNMLENLIKLFKGLEA 181
Query: 224 LGVRPDEDT-VRRIASAFQRVGQDDKQKLVLKKY 256
+P E + V+++A +++ +G ++++ VL+KY
Sbjct: 182 FDRQPPEKSIVQKVADSYEMLGLLEEKERVLEKY 215
>gi|363807778|ref|NP_001241921.1| uncharacterized protein LOC100795658 [Glycine max]
gi|255637229|gb|ACU18945.1| unknown [Glycine max]
Length = 300
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 99/158 (62%), Gaps = 1/158 (0%)
Query: 100 ELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATM 159
EL + K AVYGALD W AWE FP+ + L L K QW RV+QV KWMLSKGQG TM
Sbjct: 84 ELNDSKEAVYGALDAWVAWEQNFPIASLKTILISLEKDQQWHRVVQVIKWMLSKGQGMTM 143
Query: 160 GTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFA 219
GTY L+ A D DHR +EA+ W + + + S+ +L MIS+Y ++M ++++F
Sbjct: 144 GTYGQLIRALDMDHRVEEAQKFWEIKIGSDLHSVPWQLCHLMISVYYRNNMLQDLVKLFK 203
Query: 220 DMEELGVRP-DEDTVRRIASAFQRVGQDDKQKLVLKKY 256
+E +P D+ ++++A+A++ +G ++ VL+KY
Sbjct: 204 GLEAFDRKPRDKSIIQKVANAYEVLGLVKEKVRVLEKY 241
>gi|357481969|ref|XP_003611270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512605|gb|AES94228.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 301
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 125/232 (53%), Gaps = 5/232 (2%)
Query: 28 FSLLTTKLATSNPHL--KCFLNQNKQPPVSNSNANASKKNKLVVKVGKKEQHLWQKRDSA 85
FS L T+L+ N +C+ QP S + + + + + K ++ +
Sbjct: 7 FSYLVTRLSQGNISNVNRCYSQILSQPSYSQTKSESVPSEQKASREIPK-HYIGENVSRK 65
Query: 86 GSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQ 145
+ L +R + + + K A+YGALD W AWE FP+ + L L K QW R++Q
Sbjct: 66 DRTKFLLTTLRDMDD-TDSKEAIYGALDAWVAWEQNFPIGSLRNILLCLEKEQQWHRIVQ 124
Query: 146 VAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLY 205
V KWMLSKGQG TMGTY L+ A D DHR EA W M + T S+ +L MIS+Y
Sbjct: 125 VIKWMLSKGQGTTMGTYGQLIRALDMDHRVGEAHKFWEMKIGTDLHSVPWQLCHLMISVY 184
Query: 206 DHHDMPNKIIEVFADMEELGVRP-DEDTVRRIASAFQRVGQDDKQKLVLKKY 256
++M ++ +F +E +P D+ ++++A+A++ +G ++++ V++KY
Sbjct: 185 YRNNMLEDLVRLFKGLEAFDRKPRDKLIIQKVANAYEMLGLIEEKERVMEKY 236
>gi|46931326|gb|AAT06467.1| At4g18975 [Arabidopsis thaliana]
gi|62320588|dbj|BAD95227.1| hypothetical protein [Arabidopsis thaliana]
Length = 152
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/85 (75%), Positives = 73/85 (85%)
Query: 61 ASKKNKLVVKVGKKEQHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWET 120
A+ +K + KVGKKE HLW+K DSAGSGQKALNLVR++S LPNEK AVYGAL+KW AWE
Sbjct: 68 ATVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEV 127
Query: 121 EFPLIAAAKALRILRKRGQWLRVIQ 145
EFP+IAAAKAL+ILRKR QW RVIQ
Sbjct: 128 EFPIIAAAKALQILRKRSQWHRVIQ 152
>gi|195606960|gb|ACG25310.1| EMB2748 [Zea mays]
Length = 322
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 107/172 (62%), Gaps = 1/172 (0%)
Query: 86 GSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQ 145
S +K LV + L + + AVYG LD W A+E +FPL + +AL +L K QW R++Q
Sbjct: 94 SSAEKRKFLVNTLLSLEDSREAVYGTLDAWVAFEQDFPLASLKQALSVLEKEEQWHRIVQ 153
Query: 146 VAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLY 205
V KWMLSKGQG TM TY+ L A +KD+RA+EA +W + S+ R M+++Y
Sbjct: 154 VIKWMLSKGQGNTMRTYELLACALEKDNRAEEAHRIWQNKVGHDLHSVPWRFCRLMLAIY 213
Query: 206 DHHDMPNKIIEVFADMEELGVR-PDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
++ ++++++F ++E G + P +D VR++ A++ +G + +K++L KY
Sbjct: 214 YRNNRLDRLVKLFKELEACGRKPPSKDIVRKVEDAYETLGLLEDKKVLLDKY 265
>gi|194706984|gb|ACF87576.1| unknown [Zea mays]
gi|413915962|gb|AFW55894.1| EMB2748 [Zea mays]
Length = 322
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 107/172 (62%), Gaps = 1/172 (0%)
Query: 86 GSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQ 145
S +K LV + L + + AVYG LD W A+E +FPL + +AL +L K QW R++Q
Sbjct: 94 SSAEKRKFLVNTLLSLEDSREAVYGTLDAWVAFEQDFPLASLKQALSVLEKEEQWHRIVQ 153
Query: 146 VAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLY 205
V KWMLSKGQG TM TY+ L A +KD+RA+EA +W + S+ R M+++Y
Sbjct: 154 VIKWMLSKGQGNTMRTYELLACALEKDNRAEEAHRIWQNKVGHDLHSVPWRFCRLMLAIY 213
Query: 206 DHHDMPNKIIEVFADMEELGVR-PDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
++ ++++++F ++E G + P +D VR++ A++ +G + +K++L KY
Sbjct: 214 YRNNRLDRLVKLFKELEACGRKPPSKDIVRKVEDAYETLGLLEDKKVLLDKY 265
>gi|297848694|ref|XP_002892228.1| EMB2748 [Arabidopsis lyrata subsp. lyrata]
gi|297338070|gb|EFH68487.1| EMB2748 [Arabidopsis lyrata subsp. lyrata]
Length = 395
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 102/164 (62%), Gaps = 1/164 (0%)
Query: 94 LVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSK 153
LV + ++ + K AVYGALD W AWE FP+ + + + IL K QW R+IQV KW+LSK
Sbjct: 150 LVNTLLDMEDNKEAVYGALDAWVAWERNFPIASLKRVIAILEKEHQWHRMIQVIKWILSK 209
Query: 154 GQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNK 213
GQG TMGTY L+ A D D RA+EA +W + S+ +L +M+ +Y ++M +
Sbjct: 210 GQGNTMGTYGQLIRALDMDRRAEEAHVIWRKKIGNDLHSVPWQLCLQMMRIYFRNNMLQE 269
Query: 214 IIEVFADMEELGVR-PDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
++++F D+E + PD+ V+ +A ++ +G D+++ V+ KY
Sbjct: 270 LVKLFKDLESYDRKPPDKHIVQTVADTYELLGMVDEKERVMTKY 313
>gi|449438159|ref|XP_004136857.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Cucumis sativus]
Length = 302
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 105/184 (57%), Gaps = 11/184 (5%)
Query: 94 LVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSK 153
LV + +L + K AVYGALD W AWE FP+ + L L K QW R++QV KWMLSK
Sbjct: 97 LVNTLLDLRDSKEAVYGALDAWVAWEQVFPIASLKHVLAALEKEQQWHRIVQVIKWMLSK 156
Query: 154 GQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNK 213
GQG TM Y L+ A D DHR +EA W M + + S+ ++ M+++Y +
Sbjct: 157 GQGTTMNVYGQLIRALDMDHRGEEAHKFWVMKIGSDLHSVPWQVCRSMMAIYYRNKRLED 216
Query: 214 IIEVFADMEELGVR-PDEDTVRRIASAFQRVGQDDKQKLVLKKY----------LSKWKY 262
++++F D+E G + PD+ V+R+A A + +G ++++ VL KY + K+K
Sbjct: 217 LVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLFDEKEGPMKKYKR 276
Query: 263 IHFK 266
I F+
Sbjct: 277 ISFE 280
>gi|255549552|ref|XP_002515828.1| conserved hypothetical protein [Ricinus communis]
gi|223545057|gb|EEF46570.1| conserved hypothetical protein [Ricinus communis]
Length = 317
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 97/153 (63%), Gaps = 1/153 (0%)
Query: 105 KHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDT 164
K AVYGA+D W AWE FP+ + + L +L K QW RV+QV KW++SKGQG TMGTY
Sbjct: 65 KEAVYGAVDAWVAWEHNFPIASLKRVLILLEKEQQWHRVVQVIKWIISKGQGNTMGTYGQ 124
Query: 165 LLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEEL 224
L+ A D DHRA+EA W + S+ +L RMIS+Y ++M ++++ +E
Sbjct: 125 LIRALDMDHRANEAHMFWLKKIGLDLHSVPWQLCHRMISVYYRNNMLESLVKLSKGLEAF 184
Query: 225 GVR-PDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
+ PD+ V+++A A++ +G ++++ VL+KY
Sbjct: 185 DHKPPDKSIVQKVADAYEMLGMLEEKERVLQKY 217
>gi|224090805|ref|XP_002309089.1| predicted protein [Populus trichocarpa]
gi|222855065|gb|EEE92612.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 98/158 (62%), Gaps = 1/158 (0%)
Query: 100 ELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATM 159
+L + K AVYGALD W AWE +FP+ + + L L K QW R++QV KWMLSKGQG TM
Sbjct: 74 DLNDSKDAVYGALDAWVAWEQKFPIASIKQVLIALEKEQQWHRIVQVIKWMLSKGQGTTM 133
Query: 160 GTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFA 219
TY L+ A D DHRA EA W + S+ +L + MI++Y ++M +I++F
Sbjct: 134 ATYAQLIRALDMDHRAKEAHEFWLKKIGRDLHSVPWKLCNSMITIYYRNNMLENLIKLFK 193
Query: 220 DMEELGVRPDEDT-VRRIASAFQRVGQDDKQKLVLKKY 256
+E +P E + V+++A A++ +G +++ +L+KY
Sbjct: 194 GLEAFDRKPPEKSIVQKVADAYEMLGLLEEKGRLLEKY 231
>gi|221327739|gb|ACM17558.1| expressed protein [Oryza brachyantha]
Length = 383
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 109/171 (63%), Gaps = 1/171 (0%)
Query: 87 SGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQV 146
S +K LV + +L + K VY L+ W A+E EFPL++ +AL +L K QW R++QV
Sbjct: 191 STEKRKFLVNTLLDLEDSKEVVYSTLNAWVAFEQEFPLVSIKQALVVLEKEEQWHRIVQV 250
Query: 147 AKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYD 206
KWMLSKGQG T+ TY+ L+ A +KD+RA+EA +W + +S+ R M+ +Y
Sbjct: 251 IKWMLSKGQGKTIRTYEQLVCALEKDNRAEEAYRIWEDKIAHDLQSVPWRFCRLMLGIYY 310
Query: 207 HHDMPNKIIEVFADMEELGVR-PDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
++ ++++++F ++E G + P +D VR++ A++ +G +++K +L+KY
Sbjct: 311 RNNRLDRLVKLFKNLEACGRKPPSKDIVRKVEDAYEMLGLIEEKKELLEKY 361
>gi|115440033|ref|NP_001044296.1| Os01g0757700 [Oryza sativa Japonica Group]
gi|113533827|dbj|BAF06210.1| Os01g0757700 [Oryza sativa Japonica Group]
gi|215734974|dbj|BAG95696.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 213
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 82/140 (58%)
Query: 78 LWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKR 137
+W+ R G+ K+ LV V L N K VYGALD + AWE EFPLIA KAL+ L
Sbjct: 44 VWKTRKRIGTVSKSQKLVECVKGLSNVKEEVYGALDSFVAWELEFPLIAVKKALKTLEDE 103
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
+W R+IQV KWM +KGQG TMG+Y TLL A +D R +EAE L+ I +
Sbjct: 104 KEWKRIIQVIKWMFNKGQGKTMGSYYTLLNALIEDGRVEEAEELYGKIFSRYLEGLPHTF 163
Query: 198 FSRMISLYDHHDMPNKIIEV 217
F RMISLY + K+ EV
Sbjct: 164 FMRMISLYYRLESYQKMFEV 183
>gi|125533224|gb|EAY79772.1| hypothetical protein OsI_34928 [Oryza sativa Indica Group]
Length = 292
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 107/172 (62%), Gaps = 1/172 (0%)
Query: 86 GSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQ 145
S +K LV + +L + K VY LD W A+E +FP+ + +AL L K QW R++Q
Sbjct: 93 SSAEKRKFLVNTLLDLEDSKEGVYSTLDAWVAFEQDFPVASIKQALVALEKEEQWHRIVQ 152
Query: 146 VAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLY 205
V KWMLSKGQG T+ TY+ L+ A +KD+RADEA +W + +S+ R M+ +Y
Sbjct: 153 VIKWMLSKGQGKTIRTYEQLVCALEKDNRADEACRIWEFKIAHDLQSVPWRFCRLMLGIY 212
Query: 206 DHHDMPNKIIEVFADMEELGVR-PDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
++ ++++++F ++E G + P +D VR++ A++ +G +++K +L+KY
Sbjct: 213 YRNNKLDRLVKLFKNLEACGRKPPSKDIVRKVEDAYEMLGLVEEKKELLEKY 264
>gi|115487086|ref|NP_001066030.1| Os12g0123100 [Oryza sativa Japonica Group]
gi|108862116|gb|ABA95695.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648537|dbj|BAF29049.1| Os12g0123100 [Oryza sativa Japonica Group]
gi|215697743|dbj|BAG91737.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218186343|gb|EEC68770.1| hypothetical protein OsI_37301 [Oryza sativa Indica Group]
gi|222616540|gb|EEE52672.1| hypothetical protein OsJ_35053 [Oryza sativa Japonica Group]
Length = 292
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 106/172 (61%), Gaps = 1/172 (0%)
Query: 86 GSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQ 145
S +K LV + +L + K VY LD W A+E EFP+ + +AL L K QW R++Q
Sbjct: 93 SSAEKRKFLVNTLLDLEDSKEGVYSTLDAWVAFEQEFPVASLKQALVALEKEEQWHRIVQ 152
Query: 146 VAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLY 205
V KWMLSKGQG T+ TY+ L+ A +KD+RADEA +W + + +S+ R M+ +Y
Sbjct: 153 VIKWMLSKGQGKTIRTYEQLVCALEKDNRADEACRIWELKIAHDLQSVPWRFCRLMLGIY 212
Query: 206 DHHDMPNKIIEVFADMEELGVR-PDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
++ + ++++F ++E G + P +D VR++ ++ +G +++K +L+KY
Sbjct: 213 YRNNRLDTLVKLFKNLEACGRKPPSKDIVRKVEDTYEMLGLVEEKKELLEKY 264
>gi|18390413|ref|NP_563712.1| uncharacterized protein [Arabidopsis thaliana]
gi|13430646|gb|AAK25945.1|AF360235_1 unknown protein [Arabidopsis thaliana]
gi|14532820|gb|AAK64092.1| unknown protein [Arabidopsis thaliana]
gi|332189597|gb|AEE27718.1| uncharacterized protein [Arabidopsis thaliana]
Length = 381
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 101/164 (61%), Gaps = 1/164 (0%)
Query: 94 LVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSK 153
LV + ++ + K AVYGALD W AWE FP+ + + L K QW R++QV KW+LSK
Sbjct: 149 LVNTLLDIEDNKEAVYGALDAWVAWERNFPIASLKIVIASLEKEHQWHRMVQVIKWILSK 208
Query: 154 GQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNK 213
GQG TMGTY L+ A D D RA+EA +W + S+ +L +M+ +Y ++M +
Sbjct: 209 GQGNTMGTYGQLIRALDMDRRAEEAHVIWRKKVGNDLHSVPWQLCLQMMRIYFRNNMLQE 268
Query: 214 IIEVFADMEELGVR-PDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
++++F D+E + PD+ V+ +A A++ +G D+++ V+ KY
Sbjct: 269 LVKLFKDLESYDRKPPDKHIVQTVADAYELLGMLDEKERVVTKY 312
>gi|115483917|ref|NP_001065620.1| Os11g0125500 [Oryza sativa Japonica Group]
gi|77548500|gb|ABA91297.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113644324|dbj|BAF27465.1| Os11g0125500 [Oryza sativa Japonica Group]
gi|125576035|gb|EAZ17257.1| hypothetical protein OsJ_32778 [Oryza sativa Japonica Group]
gi|215697284|dbj|BAG91278.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 292
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 106/172 (61%), Gaps = 1/172 (0%)
Query: 86 GSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQ 145
S +K LV + +L + K VY LD W A+E +FP+ + +AL L K QW R++Q
Sbjct: 93 SSAEKRKFLVNTLLDLEDSKEGVYSTLDAWVAFEQDFPVASIKQALVALEKEEQWHRIVQ 152
Query: 146 VAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLY 205
V KWM SKGQG T+ TY+ L+ A +KD+RADEA +W + +S+ R M+ +Y
Sbjct: 153 VIKWMSSKGQGKTIRTYEQLVCALEKDNRADEACRIWEFKIAHDLQSVPWRFCRLMLGIY 212
Query: 206 DHHDMPNKIIEVFADMEELGVR-PDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
++ ++++++F ++E G + P +D VR++ A++ +G +++K +L+KY
Sbjct: 213 YRNNKLDRLVKLFKNLEACGRKPPSKDIVRKVEDAYEMLGLVEEKKELLEKY 264
>gi|357153101|ref|XP_003576338.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Brachypodium distachyon]
Length = 316
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 119/204 (58%), Gaps = 8/204 (3%)
Query: 59 ANASKKNKLVV-KVGKKEQHLWQKRDSAG----SGQKALNLVRIVSELPNEKHAVYGALD 113
+ A K N V+ ++ K + L KR G S +K L+ + +L + K AVY LD
Sbjct: 63 STAMKDNDAVIDRIQKSTREL--KRGPVGHTLSSAEKRKFLINTLLDLEDSKEAVYSTLD 120
Query: 114 KWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDH 173
W A+E EFPL + +A+ L K QW R++QV KWMLSKGQG T+ TY+ L+ A +KD+
Sbjct: 121 AWVAFEQEFPLASIKQAIEALEKEEQWHRIVQVIKWMLSKGQGNTIRTYEQLVRALEKDN 180
Query: 174 RADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVR-PDEDT 232
RA+EA +W + S+ R M+++Y ++ +++I++F ++E G + P +
Sbjct: 181 RAEEAHRIWEKKISHDLHSVPWRFCGLMLAIYYRNNKLDRLIKLFHNLEACGRKCPSREY 240
Query: 233 VRRIASAFQRVGQDDKQKLVLKKY 256
+R++ A++ +G +++ +L KY
Sbjct: 241 IRKVEDAYEMLGLLEEKTALLDKY 264
>gi|2494119|gb|AAB80628.1| EST gb|T04104 comes from this gene [Arabidopsis thaliana]
Length = 398
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 98/158 (62%), Gaps = 1/158 (0%)
Query: 100 ELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATM 159
++ + K AVYGALD W AWE FP+ + + L K QW R++QV KW+LSKGQG TM
Sbjct: 172 DIEDNKEAVYGALDAWVAWERNFPIASLKIVIASLEKEHQWHRMVQVIKWILSKGQGNTM 231
Query: 160 GTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFA 219
GTY L+ A D D RA+EA +W + S+ +L +M+ +Y ++M +++++F
Sbjct: 232 GTYGQLIRALDMDRRAEEAHVIWRKKVGNDLHSVPWQLCLQMMRIYFRNNMLQELVKLFK 291
Query: 220 DMEELGVR-PDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
D+E + PD+ V+ +A A++ +G D+++ V+ KY
Sbjct: 292 DLESYDRKPPDKHIVQTVADAYELLGMLDEKERVVTKY 329
>gi|414880432|tpg|DAA57563.1| TPA: hypothetical protein ZEAMMB73_276663 [Zea mays]
Length = 193
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 81/139 (58%)
Query: 78 LWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKR 137
+W+ R G+ K+ LV + L N K VYGALD + AWE EFPLI KAL+ L
Sbjct: 44 VWKTRKKIGTISKSQKLVECIKGLSNVKEEVYGALDSFVAWELEFPLIVVKKALKKLEDE 103
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
+W R+IQV KWM +KGQG TMG+Y TLL A +D R +EAE L+ M+ + +
Sbjct: 104 KEWKRIIQVIKWMFNKGQGKTMGSYYTLLNALIEDGRIEEAEELFRMVFSRYMEGLPRTF 163
Query: 198 FSRMISLYDHHDMPNKIIE 216
F R+IS Y +K+ E
Sbjct: 164 FMRIISFYYSAGEHDKMFE 182
>gi|30678929|ref|NP_849590.1| uncharacterized protein [Arabidopsis thaliana]
gi|332189598|gb|AEE27719.1| uncharacterized protein [Arabidopsis thaliana]
Length = 384
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 101/167 (60%), Gaps = 4/167 (2%)
Query: 94 LVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSK 153
LV + ++ + K AVYGALD W AWE FP+ + + L K QW R++QV KW+LSK
Sbjct: 149 LVNTLLDIEDNKEAVYGALDAWVAWERNFPIASLKIVIASLEKEHQWHRMVQVIKWILSK 208
Query: 154 GQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNK 213
GQG TMGTY L+ A D D RA+EA +W + S+ +L +M+ +Y ++M +
Sbjct: 209 GQGNTMGTYGQLIRALDMDRRAEEAHVIWRKKVGNDLHSVPWQLCLQMMRIYFRNNMLQE 268
Query: 214 IIEV---FADMEELGVR-PDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
+++V F D+E + PD+ V+ +A A++ +G D+++ V+ KY
Sbjct: 269 LVKVMKLFKDLESYDRKPPDKHIVQTVADAYELLGMLDEKERVVTKY 315
>gi|413952395|gb|AFW85044.1| hypothetical protein ZEAMMB73_708833 [Zea mays]
Length = 287
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 80/129 (62%), Gaps = 1/129 (0%)
Query: 146 VAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLY 205
V KWM +KGQG TMG+Y TLL A +D R +EAE L+ M+ + + F RMIS Y
Sbjct: 64 VIKWMFNKGQGKTMGSYYTLLNALIEDGRIEEAEELFGMVFSRYMEGLPRTFFMRMISFY 123
Query: 206 DHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK-QKLVLKKYLSKWKYIH 264
+ +K+ E+FADMEELGVRPD +R + FQ++ DK +KL K KW Y H
Sbjct: 124 YSVEAYDKMFEIFADMEELGVRPDGSIIRMLGDVFQKLEMMDKYEKLKKKYPPPKWDYRH 183
Query: 265 FKGERVRVR 273
KG+R+R+R
Sbjct: 184 IKGKRIRIR 192
>gi|302798017|ref|XP_002980769.1| hypothetical protein SELMODRAFT_420330 [Selaginella moellendorffii]
gi|300151775|gb|EFJ18420.1| hypothetical protein SELMODRAFT_420330 [Selaginella moellendorffii]
Length = 233
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 92/169 (54%), Gaps = 19/169 (11%)
Query: 99 SELPNEK-HAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGA 157
+E+PNE+ A Y L + T + L+ A V KWM SKG G
Sbjct: 42 NEVPNERTKAPYDVLPRRTKMQRARDLVDA------------------VIKWMFSKGHGF 83
Query: 158 TMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEV 217
TM TY LL A D D R DE E +W+ + T+ S+ + +++RMI++YD +P+K I++
Sbjct: 84 TMNTYGCLLRALDIDGRVDEVEHIWHTFVVTKQESVPRVMYARMITMYDRRALPDKAIKM 143
Query: 218 FADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKWKYIHFK 266
F ++E G RPD T+ RI ++++G +K +L+K+ ++I FK
Sbjct: 144 FKELELSGTRPDPATIIRIGKIYEKLGFTNKTAELLEKHKPTKRFISFK 192
>gi|297607417|ref|NP_001059918.2| Os07g0545900 [Oryza sativa Japonica Group]
gi|255677866|dbj|BAF21832.2| Os07g0545900, partial [Oryza sativa Japonica Group]
Length = 63
Score = 94.7 bits (234), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/58 (70%), Positives = 50/58 (86%)
Query: 217 VFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKWKYIHFKGERVRVRR 274
++ADMEELGV PDEDT RRI AF +GQ+DK+K+VL+KYL K+KY+HF GERVRVRR
Sbjct: 1 IYADMEELGVHPDEDTTRRIGRAFVTLGQEDKEKIVLEKYLKKYKYMHFNGERVRVRR 58
>gi|225433732|ref|XP_002269708.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform 2 [Vitis vinifera]
Length = 252
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 143 VIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMI 202
V V KWMLSKGQG TMGTY L+ A D DHRA+EA W + T S+ L RMI
Sbjct: 92 VTTVVKWMLSKGQGTTMGTYGQLIRALDMDHRAEEAHEFWVKKIGTDLHSVPWHLCHRMI 151
Query: 203 SLYDHHDMPNKIIEVFADMEELGVRP-DEDTVRRIASAFQRVGQDDKQKLVLKKY 256
S+Y ++M ++++F +E +P D+ V+++A A++ +G ++++ + +KY
Sbjct: 152 SVYYRNNMLENLVKLFKGLEAFDRKPQDKLVVKKVADAYEMLGLLEEKERIFEKY 206
>gi|414887053|tpg|DAA63067.1| TPA: hypothetical protein ZEAMMB73_239988 [Zea mays]
Length = 107
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 51/68 (75%)
Query: 151 LSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDM 210
+SKGQ T TYDTLLLA D R DEAES+WN ++ T TRS+ KRLFSRMI +YD H
Sbjct: 1 MSKGQVLTWTTYDTLLLALLMDKRVDEAESVWNTVIQTHTRSVPKRLFSRMILIYDIHQR 60
Query: 211 PNKIIEVF 218
P+K++EV+
Sbjct: 61 PDKVLEVY 68
>gi|195604196|gb|ACG23928.1| hypothetical protein [Zea mays]
Length = 59
Score = 89.4 bits (220), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/56 (75%), Positives = 46/56 (82%)
Query: 221 MEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKWKYIHFKGERVRVRRDA 276
MEELGVRPDEDT RRI AF GQ++K+K VL+KYL KWKYIHF GERVRVRRD
Sbjct: 1 MEELGVRPDEDTTRRIGKAFVASGQEEKEKHVLEKYLKKWKYIHFNGERVRVRRDG 56
>gi|414887018|tpg|DAA63032.1| TPA: hypothetical protein ZEAMMB73_524388 [Zea mays]
Length = 59
Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/56 (75%), Positives = 46/56 (82%)
Query: 221 MEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKWKYIHFKGERVRVRRDA 276
MEELGVRPDEDT RRI AF GQ++K+K VL+KYL KWKYIHF GERVRVRRD
Sbjct: 1 MEELGVRPDEDTARRIGKAFVASGQEEKEKHVLEKYLKKWKYIHFNGERVRVRRDG 56
>gi|413915963|gb|AFW55895.1| hypothetical protein ZEAMMB73_595520 [Zea mays]
Length = 173
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query: 150 MLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHD 209
MLSKGQG TM TY+ L A +KD+RA+EA +W + S+ R M+++Y ++
Sbjct: 1 MLSKGQGNTMRTYELLACALEKDNRAEEAHRIWQNKVGHDLHSVPWRFCRLMLAIYYRNN 60
Query: 210 MPNKIIEVFADMEELGVR-PDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
++++++F ++E G + P +D VR++ A++ +G + +K++L KY
Sbjct: 61 RLDRLVKLFKELEACGRKPPSKDIVRKVEDAYETLGLLEDKKVLLDKY 108
>gi|226500752|ref|NP_001144036.1| uncharacterized protein LOC100276860 [Zea mays]
gi|195635811|gb|ACG37374.1| hypothetical protein [Zea mays]
Length = 165
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query: 150 MLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHD 209
MLSKGQG TM TY+ L A +KD+RA+EA +W + S+ R M+++Y ++
Sbjct: 1 MLSKGQGNTMRTYELLACALEKDNRAEEAHKIWQNKVGHDLHSVPWRFCRLMLAIYYRNN 60
Query: 210 MPNKIIEVFADMEELGVR-PDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
++++++F ++E G + P +D VR++ A++ +G + +K++L KY
Sbjct: 61 RLDRLVKLFKELEACGRKPPSKDIVRKVEDAYETLGLLEDKKVLLDKY 108
>gi|226494526|ref|NP_001141572.1| uncharacterized protein LOC100273688 [Zea mays]
gi|194705116|gb|ACF86642.1| unknown [Zea mays]
gi|413915964|gb|AFW55896.1| hypothetical protein ZEAMMB73_595520 [Zea mays]
Length = 165
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query: 150 MLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHD 209
MLSKGQG TM TY+ L A +KD+RA+EA +W + S+ R M+++Y ++
Sbjct: 1 MLSKGQGNTMRTYELLACALEKDNRAEEAHRIWQNKVGHDLHSVPWRFCRLMLAIYYRNN 60
Query: 210 MPNKIIEVFADMEELGVR-PDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
++++++F ++E G + P +D VR++ A++ +G + +K++L KY
Sbjct: 61 RLDRLVKLFKELEACGRKPPSKDIVRKVEDAYETLGLLEDKKVLLDKY 108
>gi|413935540|gb|AFW70091.1| hypothetical protein ZEAMMB73_191028 [Zea mays]
Length = 399
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 62/131 (47%), Gaps = 42/131 (32%)
Query: 144 IQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMIS 203
+ V KWM +KGQG TMG+Y TLL A +I
Sbjct: 182 VHVIKWMFNKGQGKTMGSYYTLLNA--------------------------------LIE 209
Query: 204 LYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK-QKLVLKKYLSKWKY 262
L+ +FADMEELGVRPD +R + FQ++ DK +KL K KW+Y
Sbjct: 210 LFGM---------IFADMEELGVRPDGSIIRMLGDVFQKLEMMDKYEKLKKKYPPPKWEY 260
Query: 263 IHFKGERVRVR 273
+ KG+R+R+R
Sbjct: 261 RYIKGKRIRIR 271
>gi|255604286|ref|XP_002538197.1| hypothetical protein RCOM_1887760 [Ricinus communis]
gi|223513334|gb|EEF24186.1| hypothetical protein RCOM_1887760 [Ricinus communis]
Length = 72
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%)
Query: 146 VAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLY 205
V KW++SKGQG TMGTY L+ A D DHRA+EA W + S+ +L RMIS+Y
Sbjct: 1 VIKWIISKGQGNTMGTYGQLIRALDMDHRANEAHMFWLKKIGLDLHSVPWQLCHRMISVY 60
Query: 206 DHHDMPNKIIEV 217
++M +++V
Sbjct: 61 YRNNMLESLVKV 72
>gi|224140309|ref|XP_002323525.1| predicted protein [Populus trichocarpa]
gi|222868155|gb|EEF05286.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 159 MGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVF 218
MGTY + A D DHRA EA W + S+ +L +RMIS+Y ++M +I++F
Sbjct: 1 MGTYAQFIRALDMDHRAKEAHEFWLTKIGRDLHSVPWKLCNRMISIYYRNNMLENLIKLF 60
Query: 219 ADMEELGVRPDEDT-VRRIASAFQRVGQDDKQKLVLKKY 256
+E +P E + V+++A +++ +G ++++ VL+KY
Sbjct: 61 KGLEAFDRQPPEKSIVQKVADSYEMLGLLEEKERVLEKY 99
>gi|449478943|ref|XP_004155460.1| PREDICTED: uncharacterized protein LOC101227783 [Cucumis sativus]
Length = 141
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 11/119 (9%)
Query: 159 MGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVF 218
M Y L+ A D DHR +EA W M + + S+ ++ M+++Y + ++++F
Sbjct: 1 MNVYGQLIRALDMDHRGEEAHKFWVMKIGSDLHSVPWQVCRSMMAIYYRNKRLEDLVKLF 60
Query: 219 ADMEELGVR-PDEDTVRRIASAFQRVGQDDKQKLVLKKY----------LSKWKYIHFK 266
D+E G + PD+ V+R+A A + +G ++++ VL KY + K+K I F+
Sbjct: 61 KDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLFDEKEGPMKKYKRISFE 119
>gi|326509733|dbj|BAJ87082.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 189
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 87 SGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQV 146
S +K L+ + +L + K AVY LD W A+E +FPL + +A+ L K QW R++QV
Sbjct: 107 SAEKRKFLIHTLLDLEDSKEAVYSTLDAWIAFEQDFPLASLKQAIVALEKEEQWHRIVQV 166
Query: 147 AKWML 151
+ ++
Sbjct: 167 LQIII 171
>gi|242067301|ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
gi|241934770|gb|EES07915.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
Length = 572
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 199 SRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQK 250
S MIS Y + PN+ + +F DM+E G+RPDE T+ + SA +G DK K
Sbjct: 272 SAMISGYADSNQPNEALSLFNDMQECGIRPDEVTMLSVISACANLGSLDKAK 323
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 145 QVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWN-MILHTQTRSISKRLFSRMIS 203
QV + M + G TY+ LL + K HR EA + N M+L+ + SI ++ +IS
Sbjct: 300 QVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVT--YNSLIS 357
Query: 204 LYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
Y M ++ +E+ M E G +PD T + S F+R G+
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK 399
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
+ G +++ M KG + TY TLL F++ + + A S++ + + + +
Sbjct: 361 RDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP-NI 419
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
F+ I +Y + +++++F ++ G+ PD T + + F + G D + V K+
Sbjct: 420 CTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKE 479
>gi|297828902|ref|XP_002882333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328173|gb|EFH58592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 506
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 14/202 (6%)
Query: 69 VKVGKKEQHLWQKRDSAGSGQKAL-----NLVRIVSELPNEKHAVYGALDKWTAWETEFP 123
K + E+ LW ++ G G + ++R + +E VY L + A +
Sbjct: 233 CKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ-QSEFVKVYEMLSEMEANGSPPN 291
Query: 124 LIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWN 183
I + L + ++ ++VA M G Y+ L+ + R +EAE ++
Sbjct: 292 SITYTTIMSSLNAQKEFEEALRVATRMKRSGCQPDSLFYNCLIHTLARSGRLEEAERVFR 351
Query: 184 MILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGV-RPDEDTVRRIA-SAFQ 241
+ + SI+ ++ MI++Y HHD +K IE+ +ME + PD T + + S F+
Sbjct: 352 VEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFK 411
Query: 242 R-----VGQDDKQKLVLKKYLS 258
R VG+ K+ +V K +LS
Sbjct: 412 RGDVVEVGKLLKE-MVTKHHLS 432
>gi|115529197|dbj|BAF34331.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 728
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K GQ +V V M + G + +Y+ L+ + K++ E E+L+ + + +
Sbjct: 602 KAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAEMETLFR-TMQEEGVVPDR 660
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
++ +I Y D P++ + F M++ G+ PD T + S F+R G D+
Sbjct: 661 WTYNTIIRTYGFADYPDRAVYWFKAMQDAGISPDRVTYMILVSTFERAGNIDE 713
>gi|168024876|ref|XP_001764961.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683770|gb|EDQ70177.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K GQ +V V M + G + +Y+ L+ + K++ E E+L+ + + +
Sbjct: 617 KAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAEMETLFR-TMQEEGVVPDR 675
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
++ +I Y D P++ + F M++ G+ PD T + S F+R G D+
Sbjct: 676 WTYNTIIRTYGFADYPDRAVYWFKAMQDAGISPDRVTYMILVSTFERAGNIDE 728
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 148 KWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDH 207
+ ML G ++ TY +LL + + + EAES+++ +L++ +++ +S MI+LY+
Sbjct: 71 QLMLQTGVLPSILTYSMMLLLYQRHRKVAEAESVFSHMLNSGVQAVVA--YSVMIALYNR 128
Query: 208 HDMPNKIIEVFADMEELGVRPDED 231
+ K ++ +M V PD D
Sbjct: 129 EGLFEKSEQIVTEMRRNNVTPDRD 152
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Query: 143 VIQVAKWMLSK-GQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRM 201
+I +A+ + S G + + +++ + + + A L+N H R + ++ M
Sbjct: 264 LINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFN---HMHERDVIS--WTAM 318
Query: 202 ISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYL 257
IS Y ++ +E+F +ME LG++PDE T+ + SA R+G D K + +Y+
Sbjct: 319 ISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYI 374
>gi|356555227|ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 486
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 4/159 (2%)
Query: 98 VSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGA 157
+S L N +V LD W + + + +R LRKR ++ + +Q+++WM +KG
Sbjct: 27 ISPLGNPNTSVVPVLDDWVFKGNKLRVAELQRIIRDLRKRSRFSQALQISEWMHNKGVCI 86
Query: 158 TMGT-YDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIE 216
T Y L K H AE+ ++ + + + + + + +++ Y +K +
Sbjct: 87 FSPTEYAVHLDLIGKVHGFSSAETYFDAL---KDQHKTNKTYGALLNCYVRQRQTDKALS 143
Query: 217 VFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
M++LG T I + +GQ +K VL++
Sbjct: 144 HLQKMKDLGFASSPLTYNDIMCLYTNIGQHEKVPDVLRE 182
>gi|115447457|ref|NP_001047508.1| Os02g0633200 [Oryza sativa Japonica Group]
gi|49388176|dbj|BAD25302.1| membrane-associated salt-inducible protein like [Oryza sativa
Japonica Group]
gi|113537039|dbj|BAF09422.1| Os02g0633200 [Oryza sativa Japonica Group]
gi|125540409|gb|EAY86804.1| hypothetical protein OsI_08180 [Oryza sativa Indica Group]
gi|125582977|gb|EAZ23908.1| hypothetical protein OsJ_07630 [Oryza sativa Japonica Group]
gi|215693356|dbj|BAG88738.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 455
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 5/134 (3%)
Query: 121 EFPLIAAAKALRILRKRGQWL----RVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRAD 176
EF + A + IL K L + +V M +G T Y T++ + K + +
Sbjct: 169 EFSITPDASSYGILVKAYCMLSKDAKAHEVLDQMRGQGFTPTNSIYTTMIDSMYKQKKME 228
Query: 177 EAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRI 236
+AE LW +L + R + +++ I + H ++EV A+MEE GV+PD T +
Sbjct: 229 QAERLWKQMLESG-RKPDQAVYNTKIMHHSLHGKTEDVLEVIAEMEEAGVKPDTITYNFL 287
Query: 237 ASAFQRVGQDDKQK 250
+++ + G+ + K
Sbjct: 288 MTSYCKHGKMETAK 301
>gi|359495626|ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic [Vitis vinifera]
Length = 701
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Query: 162 YDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADM 221
Y+ L F K D AE L++ +L + FS +IS +PNK +E F M
Sbjct: 179 YNVTLKVFRKCRNLDRAEKLFDEMLERGVKP-DNITFSTIISCARVSSLPNKAVEWFEKM 237
Query: 222 EELGVRPDEDTVRRIASAFQRVGQDDKQ-KLVLKKYLSKWK 261
E G PD+ T + A+ R G D KL + KW+
Sbjct: 238 PEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWR 278
>gi|297736717|emb|CBI25753.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Query: 162 YDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADM 221
Y+ L F K D AE L++ +L + FS +IS +PNK +E F M
Sbjct: 179 YNVTLKVFRKCRNLDRAEKLFDEMLERGVKP-DNITFSTIISCARVSSLPNKAVEWFEKM 237
Query: 222 EELGVRPDEDTVRRIASAFQRVGQDDKQ-KLVLKKYLSKWK 261
E G PD+ T + A+ R G D KL + KW+
Sbjct: 238 PEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWR 278
>gi|6721172|gb|AAF26800.1|AC016829_24 hypothetical protein [Arabidopsis thaliana]
Length = 572
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 17/219 (7%)
Query: 55 SNSNANASKKNKLV---VKVGKKEQHLWQKRDSAGSGQKAL-----NLVRIVSELPNEKH 106
S+ NA N + K + E+ LW ++ G G + ++R + E
Sbjct: 282 SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ-QFEFI 340
Query: 107 AVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLL 166
VY L + A + I + L + ++ ++VA M G Y+ L+
Sbjct: 341 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 400
Query: 167 LAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGV 226
+ R +EAE ++ + + SI+ ++ MI++Y HHD +K IE+ +ME +
Sbjct: 401 HTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNL 460
Query: 227 -RPDEDTVRRIA-SAFQR-----VGQDDKQKLVLKKYLS 258
PD T + + S F+R VG+ K+ +V K +LS
Sbjct: 461 CNPDVHTYQPLLRSCFKRGDVVEVGKLLKE-MVTKHHLS 498
>gi|147841962|emb|CAN63129.1| hypothetical protein VITISV_001456 [Vitis vinifera]
Length = 701
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Query: 162 YDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADM 221
Y+ L F K D AE L++ +L + FS +IS +PNK +E F M
Sbjct: 179 YNVTLKVFRKCRNLDXAEKLFDEMLERGVKP-DNITFSTIISCARVSSLPNKAVEWFEKM 237
Query: 222 EELGVRPDEDTVRRIASAFQRVGQDDKQ-KLVLKKYLSKWK 261
E G PD+ T + A+ R G D KL + KW+
Sbjct: 238 PEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWR 278
>gi|302761606|ref|XP_002964225.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
gi|300167954|gb|EFJ34558.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
Length = 580
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 20/156 (12%)
Query: 106 HAVYGALDKWTAWETEFPLI------------AAAKAL-RILRKRGQWLRVIQVAKWMLS 152
+ ++GAL K ++ F ++ + A AL RI K + ++ KWM S
Sbjct: 105 NVIFGALAKLQRFQDVFRMVEDLMAKNFTFSDSTADALVRIFCKALAVDKAVRFLKWMSS 164
Query: 153 KGQGATMGT--YDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFS--RMISLYDHH 208
KG M T Y+ L+ K R DEA L+ ++ + ++ +F+ MI
Sbjct: 165 KGLQVAMSTFEYNCLIEGLCKGDRIDEALRLYELM---RGNNVPADIFTYNNMIECISKL 221
Query: 209 DMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
M + +V MEE +PD+ R+ + F ++G
Sbjct: 222 GMVEQAEKVLKTMEESDCKPDKFIYTRVINGFCKLG 257
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
Query: 120 TEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAE 179
F ++ L+ L G + + M +G TY TLL AF K D A
Sbjct: 462 VNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAM 521
Query: 180 SLWNMILHTQ-TRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIAS 238
+W L T+SI+ L++ MI + + + E+F M+ELG PDE T R +
Sbjct: 522 MIWKDALSKGFTKSIT--LYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLID 579
Query: 239 AFQRVGQ 245
+ +VG
Sbjct: 580 GYCKVGN 586
>gi|212275364|ref|NP_001130677.1| uncharacterized protein LOC100191780 [Zea mays]
gi|194707568|gb|ACF87868.1| unknown [Zea mays]
gi|195624402|gb|ACG34031.1| membrane-associated salt-inducible protein like [Zea mays]
gi|195653371|gb|ACG46153.1| membrane-associated salt-inducible protein like [Zea mays]
gi|413937895|gb|AFW72446.1| putative membrane-associated salt-inducible protein [Zea mays]
Length = 471
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 145 QVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISL 204
Q M +G T Y TL+ + K +EAESLW ++ ++ ++
Sbjct: 202 QALDLMREQGISPTNRIYTTLIDSMYKRKMTNEAESLWKEMVESECEP-DVATYNVKAMY 260
Query: 205 YDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLV 252
Y H P +++EV +ME GV+PD T + +++ + G+ + K++
Sbjct: 261 YALHGKPEEVMEVMTEMEAAGVKPDTTTYNFLMTSYCKSGKLEDAKVL 308
>gi|384251704|gb|EIE25181.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 905
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ + K G W + I+V M ++G + TY+TL++A + + EA +++ +L +
Sbjct: 287 IDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACNMCGQPREAMAVYKRMLD-EG 345
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
S + ++ +IS Y +K++EVF +M G T + SA ++ GQ
Sbjct: 346 YSPNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVITYSSLISACEKAGQ 400
>gi|357151860|ref|XP_003575929.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14820-like, partial [Brachypodium
distachyon]
Length = 498
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 165 LLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEEL 224
++ + K+ + + A S++N H + + +S MIS Y ++ P++++ +F M+
Sbjct: 166 MVCGYAKNGKIEIARSIFN---HMAEKDVVS--WSAMISAYAENNQPSEVLNLFNKMQGC 220
Query: 225 GVRPDEDTVRRIASAFQRVGQDDKQK 250
GV PDE T+ + SA +G DK +
Sbjct: 221 GVSPDEITMLSVISACANIGSLDKAR 246
>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
Length = 981
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 144 IQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMIS 203
+QVA ++ G + ++L+ F R +AE L++ + T IS+ + MIS
Sbjct: 165 LQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDT--ISR---NAMIS 219
Query: 204 LYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIAS 238
+Y H + +K VF+DM G+RPD T+ + S
Sbjct: 220 MYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMS 254
>gi|18396782|ref|NP_566222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|79312733|ref|NP_001030630.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546763|sp|Q9M8W9.2|PP211_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04130, mitochondrial; Flags: Precursor
gi|332640519|gb|AEE74040.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332640520|gb|AEE74041.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 508
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 17/219 (7%)
Query: 55 SNSNANASKKNKLV---VKVGKKEQHLWQKRDSAGSGQKAL-----NLVRIVSELPNEKH 106
S+ NA N + K + E+ LW ++ G G + ++R + E
Sbjct: 218 SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ-QFEFI 276
Query: 107 AVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLL 166
VY L + A + I + L + ++ ++VA M G Y+ L+
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
Query: 167 LAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGV 226
+ R +EAE ++ + + SI+ ++ MI++Y HHD +K IE+ +ME +
Sbjct: 337 HTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNL 396
Query: 227 -RPDEDTVRRIA-SAFQR-----VGQDDKQKLVLKKYLS 258
PD T + + S F+R VG+ K+ +V K +LS
Sbjct: 397 CNPDVHTYQPLLRSCFKRGDVVEVGKLLKE-MVTKHHLS 434
>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
Length = 1215
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 144 IQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMIS 203
+QVA ++ G + ++L+ F R +AE L++ + T S ++ MIS
Sbjct: 467 LQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTIS-----WNAMIS 521
Query: 204 LYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIAS 238
+Y H + +K VF+DM G+RPD T+ + S
Sbjct: 522 MYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMS 556
>gi|194689808|gb|ACF78988.1| unknown [Zea mays]
Length = 279
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 145 QVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISL 204
Q M +G T Y TL+ + K +EAESLW ++ ++ ++
Sbjct: 10 QALDLMREQGISPTNRIYTTLIDSMYKRKMTNEAESLWKEMVESECEP-DVATYNVKAMY 68
Query: 205 YDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLV 252
Y H P +++EV +ME GV+PD T + +++ + G+ + K++
Sbjct: 69 YALHGKPEEVMEVMTEMEAAGVKPDTTTYNFLMTSYCKSGKLEDAKVL 116
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 90/219 (41%), Gaps = 34/219 (15%)
Query: 56 NSNANASKKNKLVVKVGKKEQHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKW 115
N+ + +LV K Q L+ + S + A ++ S N + L+KW
Sbjct: 99 NAEFCGRRSTRLVSKFHHGRQKLYMGKHSPEADMAAQEILSAPSMSGNSTALL---LEKW 155
Query: 116 T---AWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQ------------GATMG 160
+ +FP + LR L RG+W R +Q +WM+ +G +T+G
Sbjct: 156 SHQLVGLEDFPYL-----LRELGNRGEWERALQGYEWMVQQGHLRSEWSKLASIMISTLG 210
Query: 161 TYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFAD 220
+ +A D +RA +A N+ +S M+S Y + ++VF
Sbjct: 211 RLGKVEIALDVFNRAQKAGFGNNVYA-----------YSAMVSAYGRSGRCREALKVFQA 259
Query: 221 MEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSK 259
M++ G +P+ T I A + G D K+ L + + + K
Sbjct: 260 MKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQK 298
>gi|357113402|ref|XP_003558492.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Brachypodium distachyon]
Length = 688
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Query: 148 KWMLSKGQGATMGT-YDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYD 206
+W L + G Y+ +L A K R + E+LW+ +L + FS +IS
Sbjct: 149 RWFLGNAEVRNKGILYNVVLKALRKRRRWSDTEALWDEMLRDGVQP-DNTTFSTVISCAR 207
Query: 207 HHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD 247
+P K +E F M LG PD T + A+ R G D
Sbjct: 208 ACGLPRKAVEWFEKMPGLGCSPDMLTYSAVIDAYGRAGDAD 248
>gi|222423065|dbj|BAH19514.1| AT3G04130 [Arabidopsis thaliana]
Length = 508
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 17/219 (7%)
Query: 55 SNSNANASKKNKLV---VKVGKKEQHLWQKRDSAGSGQKAL-----NLVRIVSELPNEKH 106
S+ NA N + K + E+ LW ++ G G + ++R + E
Sbjct: 218 SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ-QFEFI 276
Query: 107 AVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLL 166
VY L + A + I + L + ++ ++VA M G Y+ L+
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
Query: 167 LAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGV 226
+ R +EAE ++ + + SI+ ++ MI++Y HHD +K IE+ +ME +
Sbjct: 337 HTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNL 396
Query: 227 -RPDEDTVRRIA-SAFQR-----VGQDDKQKLVLKKYLS 258
PD T + + S F+R VG+ K+ +V K +LS
Sbjct: 397 CNPDVHTYQPLLRSCFKRGDVVEVGKLLKE-MVTKHHLS 434
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 145 QVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWN-MILHTQTRSISKRLFSRMIS 203
QV + M + G TY+ LL + K HR EA + N M L+ + SI ++ +IS
Sbjct: 300 QVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVT--YNSLIS 357
Query: 204 LYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
Y M ++ +E+ M E G +PD T + S F+R G+
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK 399
Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
+ G +++ M KG + TY TLL F+ RA + ES N+ +
Sbjct: 361 RDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFE---RAGKVESAMNIFEEMRNAGCKP 417
Query: 196 RL--FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
+ F+ I +Y + ++++F ++ G+ PD T + + F + G D + V
Sbjct: 418 NICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 254 KK 255
K+
Sbjct: 478 KE 479
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ L K+G + I++ K ML G + +Y T++ K DEA L N+++ +
Sbjct: 469 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVK-KG 527
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
S + ++S + S NK+I++F ++++ VR D + S+ + G+ D+
Sbjct: 528 MSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDR 585
>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 1000
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 144 IQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMIS 203
+QVA ++ G + ++L+ F R +AE L++ + T S ++ MIS
Sbjct: 165 LQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTIS-----WNAMIS 219
Query: 204 LYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIAS 238
+Y H + +K VF+DM G+RPD T+ + S
Sbjct: 220 MYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMS 254
>gi|302817236|ref|XP_002990294.1| hypothetical protein SELMODRAFT_131439 [Selaginella moellendorffii]
gi|300141856|gb|EFJ08563.1| hypothetical protein SELMODRAFT_131439 [Selaginella moellendorffii]
Length = 1139
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G+ + I + + G ++ TYDT++ F K R +AE ++ L + +++
Sbjct: 875 GRLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFK-DLKSAGFQPDEKV 933
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
+S+M++ Y M ++F M+ G+RP E + + A+ R GQ K + +L
Sbjct: 934 YSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLL 989
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 11/117 (9%)
Query: 150 MLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHD 209
M+S+G + TY T+L+ +K R +A LW ++ ++ +S ++ MI++Y
Sbjct: 333 MMSRGIVPSSVTYTTMLIHLNKAERLADAALLWEDLVE-ESVELSPLAYALMITIYRKLG 391
Query: 210 MPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD----------KQKLVLKKY 256
+ +EVF M G PD + ++G+ D +Q+L KY
Sbjct: 392 RFEEALEVFEAMLGAGYYPDSLIYNMVLHMLGKLGRYDEAVDVFTAMQRQELCTSKY 448
>gi|326513138|dbj|BAK06809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 103 NEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTY 162
+E H V+ + W ++ET A L +L G+ L I + M KG +G Y
Sbjct: 375 SEAHNVFCQM--WNSYETG-DRDAFVSMLEVLCNSGKTLEAIDLLHMMPEKGVATDVGMY 431
Query: 163 DTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSR--MISLYDHHDMPNKIIEVFAD 220
+ + A K + SL++ + + I+ LF+ MIS Y + +K +F D
Sbjct: 432 NMVFSALGKLKQVSFITSLFDKM---KANGIAPDLFTYNIMISSYGRVGLVDKASGLFED 488
Query: 221 MEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
M +PD T + + + G D+ ++ K+
Sbjct: 489 MNASSCKPDVITYNSLINCLGKNGDLDEAHMLFKE 523
>gi|302794911|ref|XP_002979219.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
gi|300152987|gb|EFJ19627.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
Length = 1143
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
+ G+ + I + + G ++ TYDT++ F K R +AE ++ L + +
Sbjct: 874 RAGRLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFK-DLKSAGFQPDE 932
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
+++S+M++ Y M ++F M+ G+RP E + + A+ R GQ K + +L
Sbjct: 933 KVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLL 990
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 11/117 (9%)
Query: 150 MLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHD 209
M+S+G + TY T+L+ +K R +A LW ++ ++ +S ++ MI++Y
Sbjct: 337 MMSRGIVPSSVTYTTMLIHLNKAERLADAALLWEDLVE-ESVELSPLAYALMITIYRKLG 395
Query: 210 MPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD----------KQKLVLKKY 256
+ +EVF M G PD + ++G+ D +Q+L KY
Sbjct: 396 RFEEALEVFEAMLGAGYYPDSLIYNMVLHMLGKLGRYDEAVDVFTAMQRQELCTSKY 452
>gi|356527575|ref|XP_003532384.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61800-like [Glycine max]
Length = 577
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 37/147 (25%)
Query: 161 TYDTLLLAFDKDHRADEAESL-----------WNMILH--TQTRSISK--RLFSRM---- 201
+ +TL+ + HR ++A L +N ++H +TR IS+ LF M
Sbjct: 146 SLNTLIGVYSIHHRVNDAHKLFYECPHGDVVSYNALIHGLVKTRQISRARELFDEMPVRD 205
Query: 202 -------ISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLK 254
I+ Y H + N+ IE+F +M L V+PD + + SA ++G+
Sbjct: 206 EISWGTMIAGYSHLKLCNQAIELFNEMMRLEVKPDNIALVSVLSACAQLGE--------- 256
Query: 255 KYLSKWKYIHFKGERVRVRRDAWYESG 281
L + +H +R R+R D++ +G
Sbjct: 257 --LEQGSIVHDYIKRNRIRVDSYLATG 281
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ L K+G + I++ K ML G + +Y T++ K + DEA L N++++ +
Sbjct: 516 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN-KG 574
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
S + ++S + S NK+I++F ++++ +R D + S+ + G+ ++
Sbjct: 575 MSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETER 632
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ L K+G + I++ K ML G + +Y T++ K + DEA L N++++ +
Sbjct: 479 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN-KG 537
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
S + ++S + S NK+I++F ++++ +R D + S+ + G+ ++
Sbjct: 538 MSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETER 595
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ L K+G + I++ K ML G + +Y T++ K + DEA L N++++ +
Sbjct: 479 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN-KG 537
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
S + ++S + S NK+I++F ++++ +R D + S+ + G+ ++
Sbjct: 538 MSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETER 595
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L K+G+++R V MLS G TY+TLL+ +++ EA+ +++ +LH R +
Sbjct: 265 LCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLH---RGV 321
Query: 194 SKRL--FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
S L FS +I + + ++ + F DM+ G+ PD + + + R G
Sbjct: 322 SPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNG 374
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 137 RGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKR 196
RG+ +Q + M+ +G T+ TY+ L+ A D RA +A + ++ Q +S
Sbjct: 232 RGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDA---YAVLEEMQRNGLSPD 288
Query: 197 LFSR--MISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
+F+ +I+ Y K +EVF +M GVR T + AF R GQ
Sbjct: 289 VFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQ 339
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K G + ++V + M KG AT TY +L+ AF + + E + L+ + + R
Sbjct: 301 KEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRP-DV 359
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQK 250
+++ +I+ + + E+ A+ME+ + PD+ T + F +G+ D+ +
Sbjct: 360 VMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEAR 414
>gi|357150324|ref|XP_003575420.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Brachypodium distachyon]
Length = 468
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
Query: 115 WTAWETEFPLIAAAKALRILRKRGQWLR----VIQVAKWMLSKGQGATMGTYDTLLLAFD 170
+T EF + A + IL K +R +V M +G T + T++ +
Sbjct: 164 FTELSKEFSITPDATSYGILVKAHCMVRHDAKAHEVLAQMREEGISPTTTIFTTMIDSMY 223
Query: 171 KDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDE 230
K + +EAE+LW +L + + + ++ + H P ++ V A+ME GV+PD
Sbjct: 224 KQKKIEEAETLWKQMLESGCKPDQATYNVKAMN-FGLHGKPEDVLLVMAEMEAAGVKPDT 282
Query: 231 DTVRRIASAFQRVGQDDKQK 250
T + +++ + G+ + K
Sbjct: 283 ITYNFLMTSYCKNGKVEDAK 302
>gi|297600539|ref|NP_001049380.2| Os03g0215900 [Oryza sativa Japonica Group]
gi|108706847|gb|ABF94642.1| RSP67.2, putative, expressed [Oryza sativa Japonica Group]
gi|255674311|dbj|BAF11294.2| Os03g0215900 [Oryza sativa Japonica Group]
Length = 676
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Query: 162 YDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADM 221
Y+ L A K R +AE+LW +L + FS +IS MP K +E F M
Sbjct: 152 YNVALKALRKRRRWSDAEALWEEMLREGVQP-DNATFSTVISCARACGMPGKAVEWFEKM 210
Query: 222 EELGVRPDEDTVRRIASAFQRVGQDDKQ-KLVLKKYLSKWK 261
+ G PD T + A+ R G + +L + KW+
Sbjct: 211 PDFGCSPDMLTYSAVIDAYGRAGDAETALRLYDRARAEKWQ 251
>gi|302829725|ref|XP_002946429.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
gi|300268175|gb|EFJ52356.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
Length = 961
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K+GQ + +++ + M+ +G + TY +L+ A +K R + A L++ +H + +
Sbjct: 428 KKGQVEKALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSK-MHKENCKPNV 486
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
F+ +I+ H K E+F M+ G +PD T + +A++R GQ
Sbjct: 487 VTFNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQ 536
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 146 VAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLY 205
V K ML +G + TY+ L+ + K + +EA + + L Q R ++ +IS
Sbjct: 333 VYKQMLEEGCSPNLVTYNILIDVYVKRCQWEEAVKVLD-TLEKQAIQAEVRTYNTVISAC 391
Query: 206 DHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+ P + ++V+ M GV+P T + SA+ + GQ +K
Sbjct: 392 NKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEK 434
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ + KR QW ++V + + A + TY+T++ A +K + ++A ++ +L
Sbjct: 353 IDVYVKRCQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGV 412
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
+ S ++ +IS Y K +E+F DM G + T + SA ++ G+
Sbjct: 413 KP-SATTYTALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLISACEKAGR 466
>gi|297798228|ref|XP_002866998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312834|gb|EFH43257.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 411
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G + I++ + M KG T + T+L + K + AESLWN ++ +
Sbjct: 188 GSPQKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVAESLWNEMVKKGCELDNAAY 247
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLV 252
R++S + P ++ E+ +M +G++PD + + +A+ G D+ K V
Sbjct: 248 NVRIMSA--QKESPERVKELIEEMSTMGLKPDTISYNYLMTAYCEKGMLDEAKKV 300
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLL--LAFDKDHRADEAESLWNMILHT 188
+ L K G+ + M+ KG + +Y T+L A D + +++N++L T
Sbjct: 337 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML-T 395
Query: 189 QTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD 247
+ + +K +F+ +I+ Y M +K + +F DM+ G+ PD T + S+ R+G+ D
Sbjct: 396 KGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 454
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Query: 130 ALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQ 189
+ L K+G + I++ K ML G + +Y T++ K + DEA L N++++ +
Sbjct: 476 VINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN-K 534
Query: 190 TRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
S + ++S + S N++I++F +++++ +R D + S+ + G D+
Sbjct: 535 GMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDR 593
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLL--LAFDKDHRADEAESLWNMILHT 188
+ L K G+ + M+ KG + +Y T+L A D + +++N++L T
Sbjct: 357 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML-T 415
Query: 189 QTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD 247
+ + +K +F+ +I+ Y M +K + +F DM+ G+ PD T + S+ R+G+ D
Sbjct: 416 KGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 474
>gi|168036199|ref|XP_001770595.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678116|gb|EDQ64578.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 71/163 (43%), Gaps = 17/163 (10%)
Query: 83 DSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLR 142
+S G Q N+ + E+ N H G+L+ + L K G +
Sbjct: 578 NSYGKKQDFRNMEATLWEMQNAGHG--GSLEAYNC------------VLDAYGKAGHLDK 623
Query: 143 VIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKR-LFSRM 201
+ V M G + +Y+ L+ + + + E E+L++ + + I R ++ M
Sbjct: 624 LEDVIARMEKSGLQMDLASYNILINIYGRHTKIAEMEALFHKM--QEEGFIPDRWTYNTM 681
Query: 202 ISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
I Y + D P+K ++ F M++ G+ PD T + +AF++ G
Sbjct: 682 IRTYGYADYPDKAVDTFKMMQDSGIMPDRVTYVMLVAAFEKAG 724
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%)
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
F+ +ISLY I+ V ADM+ G PD T+ + A++R GQ K VL
Sbjct: 258 FNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERAGQTKKVVQVL 313
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 148 KWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDH 207
+ ML KG T TY ++L + K+ + ++AE ++ +L + + ++ +S MI++Y
Sbjct: 70 QMMLEKGVQPTRLTYSMMMLLYQKNGKVEDAEVAFSHMLQSGIQVVAA--YSAMIAIYTR 127
Query: 208 HDMPNKIIEVFADMEELGVRPDED 231
K ++ DM + PD D
Sbjct: 128 CGFFEKAEKIMEDMWNHKIAPDRD 151
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L K G+ ++ ++M +KG + +Y LL + + R + +L++ + +
Sbjct: 379 LCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVA- 437
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
+ F+ +IS + M ++ + VF +M+ GVRPD T + SAF R+G+
Sbjct: 438 NCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGR 489
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLL--LAFDKDHRADEAESLWNMILHTQTR 191
L K G+ + M+ KG + +Y T+L A D + +++N++L T+
Sbjct: 198 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML-TKGI 256
Query: 192 SISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD 247
+ +K +F+ +I+ Y M +K + +F DM+ G+ PD T + S+ R+G+ D
Sbjct: 257 APNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 312
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLL--LAFDKDHRADEAESLWNMILHTQTR 191
L K G+ + M+ KG + +Y T+L A D + +++N++L T+
Sbjct: 284 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML-TKGI 342
Query: 192 SISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD 247
+ +K +F+ +I+ Y M +K + +F DM+ G+ PD T + S+ R+G+ D
Sbjct: 343 APNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 398
>gi|357142780|ref|XP_003572691.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Brachypodium distachyon]
Length = 501
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 5/155 (3%)
Query: 108 VYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLL 167
VY LD ++ +I + L K + + V+ M S G Y++L+
Sbjct: 274 VYEILDSMSSEGCHPNVITYTMIMTSLAKCHMFEEALSVSHRMKSSGCKPDTLFYNSLIN 333
Query: 168 AFDKDHRADEAESLWN--MILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELG 225
K EA ++ M ++ RS++ ++ MIS++ + D+ + V +ME
Sbjct: 334 LLGKAGHLSEASQVFQVEMPMNGVPRSLAT--YNTMISVFCYKDLDEDALSVLKEMETQS 391
Query: 226 VRPDEDTVRRIASAF-QRVGQDDKQKLVLKKYLSK 259
+PD T R + F R GQDD + +L + ++K
Sbjct: 392 CKPDLQTYRPLLRLFLSRRGQDDTVRNLLNELMNK 426
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Query: 124 LIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWN 183
+I+ K + L ++G+ + + + +G T+ TY TL+ A + R + SL +
Sbjct: 43 VISRTKLMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLS 102
Query: 184 MILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRV 243
+ + S LF+ MI+ + ++ +++F M+E G +P T + F V
Sbjct: 103 KVEENGVKPDS-ILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIV 161
Query: 244 GQ 245
G+
Sbjct: 162 GR 163
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Query: 104 EKHAVYGALD----KWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQ-GAT 158
E +++G+LD AW+ F + LR R QW +I + +W+L +
Sbjct: 101 ESESIWGSLDMLPPTLDAWDDIFTVAVQ------LRMRKQWDSIISICRWILLRSSFKPD 154
Query: 159 MGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI-SKRLFSRMISLYDHHDMPNKIIEV 217
+ Y+ L+ AF + EAES + +L + R I ++ ++ +I Y + K V
Sbjct: 155 VICYNLLIEAFGQKLLYKEAESTYLQLL--EARCIPTEDTYALLIKAYCISGLLEKAEAV 212
Query: 218 FADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
FA+M G+ + + G DK + + K+
Sbjct: 213 FAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKR 250
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 56/126 (44%), Gaps = 5/126 (3%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ + K G+ +++ M+S + TY L+ AF ++ ++AE ++ + Q
Sbjct: 267 INLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQM---QE 323
Query: 191 RSISKRLFSR--MISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+ +++ ++ Y P E+F+ M+ +G PD + + A+ + G D
Sbjct: 324 AGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDD 383
Query: 249 QKLVLK 254
+ V K
Sbjct: 384 AEAVFK 389
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 5/153 (3%)
Query: 109 YGALDKWTAWETEFP--LIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLL 166
Y L + T E FP +I + L + G + I++ M+SKG T TY+TL+
Sbjct: 342 YCVLKEMT--EKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 399
Query: 167 LAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGV 226
+ K +AD AE L +L ++++ F+ +I L H M + + +M +
Sbjct: 400 KGYCKSGQADIAERLLKEMLSIGF-NVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNM 458
Query: 227 RPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSK 259
P + + S + G+ K + K+L+K
Sbjct: 459 SPGGGLLTTLISGLCKHGKHSKAVELWLKFLNK 491
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L K G + + M+ G AT+ TY L+ K + +EA S+ L + +
Sbjct: 291 LCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLE-KGFTP 349
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
++ +++ +I Y + + DM G+ P+ T+ I F ++GQ ++ + +L
Sbjct: 350 NEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECIL 409
Query: 254 KKYLSK 259
++ LS+
Sbjct: 410 EEMLSR 415
>gi|32489921|emb|CAE05513.1| OSJNBa0038P21.6 [Oryza sativa Japonica Group]
Length = 648
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 150 MLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHD 209
M+ KG + +Y TLL + + SL N+++ ++ + R F+ +I+ Y
Sbjct: 195 MVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMV-SKGIVPNHRFFNILINAYARCG 253
Query: 210 MPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD 247
M +K + +F DM+ G+ PD T + S+ R+G+ D
Sbjct: 254 MMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 291
>gi|449469206|ref|XP_004152312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Cucumis sativus]
Length = 873
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
+F+ MIS Y H M + ++VF +M E GV+PD V I SA G D+ L +
Sbjct: 658 MFTSMISGYAIHGMGEEALKVFTNMLESGVKPDHVVVTSILSACSHTGLVDQG---LNIF 714
Query: 257 LSKWKYIHFK 266
S + IH K
Sbjct: 715 HSMEEVIHIK 724
>gi|302790095|ref|XP_002976815.1| hypothetical protein SELMODRAFT_443322 [Selaginella moellendorffii]
gi|300155293|gb|EFJ21925.1| hypothetical protein SELMODRAFT_443322 [Selaginella moellendorffii]
Length = 641
Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Query: 146 VAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLY 205
+ K M+SKG + Y L+LAF R +E+ ++ +L + + +S ++
Sbjct: 355 LTKEMVSKGFKPSPSGYSALILAFASPARVNESWEVFQELLQQCGNVLDRETYSAFVTKL 414
Query: 206 DHHDMPNKIIEVFADM-EELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKWKYI 263
D + + + M E RPDE T++ + R G D + ++ + + ++K I
Sbjct: 415 AKMDRAAEAVRAYEGMTESCDRRPDEKTLQELVGCLCRTGSVDLAQWLINQVVHEFKNI 473
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L K G+ ++ M +KG + +Y TLL + + + L+N + + +
Sbjct: 380 LCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNS-MKSNGIAA 438
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
R+F+ +I Y M + + +F +M++ GV PD T + SAF R+G+
Sbjct: 439 DCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGR 490
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 199 SRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQK 250
S MIS Y D P + + +F++M+ G++PD+ T+ + SA R+G D+ K
Sbjct: 49 SAMISGYAESDKPQEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAK 100
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 34/211 (16%)
Query: 56 NSNANASKKNKLVVKVGKKEQHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKW 115
N+ + +LV K Q L+ + S + A ++ S N + L+KW
Sbjct: 100 NAEFCGRRSTRLVSKFHHGRQKLYMGKHSPEADLAAQEILSAPSTPLNSTALL---LEKW 156
Query: 116 T---AWETEFPLIAAAKALRILRKRGQWLRVIQVAKWM------------LSKGQGATMG 160
+ +FP + LR L RG+W R +Q +WM L+ +T+G
Sbjct: 157 SHQLVGLEDFPYL-----LRELGNRGEWERALQGYEWMVQQVHLRSEWSKLASIMISTLG 211
Query: 161 TYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFAD 220
+ +A D +RA +A N+ +S M+S Y + ++VF
Sbjct: 212 RLGKVEIALDVFNRAQKAGFGNNVYA-----------YSAMVSAYGRSGRCREALKVFQA 260
Query: 221 MEELGVRPDEDTVRRIASAFQRVGQDDKQKL 251
M++ G +P+ T I A + G D KQ L
Sbjct: 261 MKKAGCKPNLITYNTIIDACGKGGVDLKQAL 291
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ + + G W +V M +G + T++TL+ A K + + A S+ + +
Sbjct: 313 IAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTM---RG 369
Query: 191 RSISKRL--FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
++IS + +S MI Y + I ++ DM+E GVRPD + + + ++G+ D
Sbjct: 370 KNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDD 429
Query: 249 QKLVLK 254
+ K
Sbjct: 430 ALIACK 435
>gi|356524760|ref|XP_003530996.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Glycine max]
Length = 381
Score = 43.5 bits (101), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 68/156 (43%), Gaps = 3/156 (1%)
Query: 97 IVSELPNEKHAVYGAL--DKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKG 154
+ + L + K+ + G L D T + L+ ++ ++G + + V + + KG
Sbjct: 135 LAAYLHSRKYDIVGELFRDLPTQLSIKPDLVTYNTIIKAFCEKGSFDSALSVFQEIEEKG 194
Query: 155 QGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKI 214
T++TLL R +E E +W + + S+++ L + M +
Sbjct: 195 LSPDSITFNTLLDGLYSKGRFEEGEKVWEQMGVKNVAPGVRSYCSKLVGLAEVKKMGEAV 254
Query: 215 IEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQK 250
+ +F +ME+LGV+PD + + F G D+ K
Sbjct: 255 V-LFREMEKLGVKPDLFCINAVIKGFVNEGNLDEAK 289
>gi|449484874|ref|XP_004157004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Cucumis sativus]
Length = 881
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
+F+ MIS Y H M + ++VF +M E GV+PD V I SA G D+ L +
Sbjct: 658 MFTSMISGYAIHGMGEEALKVFTNMLESGVKPDHVVVTSILSACSHTGLVDQG---LNIF 714
Query: 257 LSKWKYIHFK 266
S + IH K
Sbjct: 715 HSMEEVIHIK 724
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ + K Q + ++V + M S G + TY L+ AF ++ ++AE ++ +
Sbjct: 284 INVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEE-MQQAG 342
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
++ ++ Y +P E+F+ ME +G PD + + AF R G
Sbjct: 343 HEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAG 396
>gi|38345134|emb|CAE02724.2| OSJNBa0055H05.11 [Oryza sativa Japonica Group]
gi|215697200|dbj|BAG91194.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 408
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 164 TLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEE 223
T++ + K+ + + A S++N + S +S MI+ Y P + + +F DM+
Sbjct: 81 TMVYGYAKNGKVEIAHSIFNGMPAKDVVS-----WSAMIAGYAESSKPMEALNLFHDMQR 135
Query: 224 LGVRPDEDTVRRIASAFQRVGQDDKQKLV 252
GV+PDE T+ + SA VG +K + +
Sbjct: 136 SGVKPDEITMLSVISACANVGALEKARCI 164
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L K G + + M+ G AT+ TY L+ K + +EA S+ L + +
Sbjct: 358 LCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLE-KGFTP 416
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
++ +++ +I Y + + DM G+ P+ T+ I F ++GQ ++ + +L
Sbjct: 417 NEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECIL 476
Query: 254 KKYLSK 259
++ LS+
Sbjct: 477 EEMLSR 482
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 161 TYDTLLLAFDKDHRADEAESLWN-MILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFA 219
TY+TL+ A ++ +EA ++N M+ H + ++ MIS+Y M + +F
Sbjct: 271 TYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWT--YNAMISVYGRCGMSREAGRLFK 328
Query: 220 DMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL---------KKYLSKWKYIHFKGER 269
D+E G PD T + AF R G DK K + K ++ IH G+R
Sbjct: 329 DLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKR 387
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 150 MLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHD 209
M+ KG + +Y TLL + + SL N+++ ++ + R F+ +I+ Y
Sbjct: 288 MVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMV-SKGIVPNHRFFNILINAYARCG 346
Query: 210 MPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD 247
M +K + +F DM+ G+ PD T + S+ R+G+ D
Sbjct: 347 MMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 384
>gi|42570403|ref|NP_850357.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330254930|gb|AEC10024.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 683
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Query: 158 TMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEV 217
T Y ++L A+ K + EAES++N + ++ M+ Y+ + K E+
Sbjct: 432 TKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEP-DVIAYTSMLHAYNASEKWGKACEL 490
Query: 218 FADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKWKYIHFKG 267
F +ME G+ PD + AF + GQ +++ L + K I F G
Sbjct: 491 FLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD--LMREKEIPFTG 538
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L K G+ + M +KG + TY LL + + + +L+N +
Sbjct: 342 LCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNS-MEGNGIVA 400
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
+R+F+ +I Y M ++ + +F M+E GV PD T + +AF R+G+
Sbjct: 401 DQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGR 452
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ + K Q + ++V + M S G + TY L+ AF ++ ++AE ++ +
Sbjct: 284 INVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEE-MQQAG 342
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
++ ++ Y +P E+F+ ME +G PD + + AF R G
Sbjct: 343 HEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAG 396
>gi|356522073|ref|XP_003529674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 685
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Query: 162 YDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADM 221
Y+ L F K D E L++ +L R FS +IS +PNK +E F M
Sbjct: 165 YNVTLKVFRKSKDLDAMEKLFDEMLQRGVRP-DNVTFSTIISCARICSLPNKAVEWFEKM 223
Query: 222 EELGVRPDEDTVRRIASAFQRVGQDD 247
G PD+ T + A+ R G D
Sbjct: 224 SSFGCEPDDVTYSAMIDAYGRAGNID 249
>gi|159464329|ref|XP_001690394.1| hypothetical protein CHLREDRAFT_114572 [Chlamydomonas reinhardtii]
gi|158279894|gb|EDP05653.1| predicted protein [Chlamydomonas reinhardtii]
Length = 287
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K+GQ + + + + M+ +G + TY +L+ A +K R + A L++ +H + +
Sbjct: 152 KKGQVEKALDIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSK-MHKENCKPNV 210
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
++ +I+ H K E+F M+ G +PD T + +A++R GQ
Sbjct: 211 VTYNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQ 260
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 146 VAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLY 205
V K ML +G + TY+ L+ + E L ++ + ++ R ++ +IS
Sbjct: 57 VYKQMLEEGCSPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQA-EVRTYNTVISAC 115
Query: 206 DHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+ P + ++V+ M GV+P T + SA+ + GQ +K
Sbjct: 116 NKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEK 158
>gi|30688764|ref|NP_850356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75158748|sp|Q8RWS8.1|PP199_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g41720; AltName: Full=Protein EMBRYO DEFECTIVE 2654
gi|20268762|gb|AAM14084.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|21436141|gb|AAM51317.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330254931|gb|AEC10025.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Query: 158 TMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEV 217
T Y ++L A+ K + EAES++N + ++ M+ Y+ + K E+
Sbjct: 564 TKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEP-DVIAYTSMLHAYNASEKWGKACEL 622
Query: 218 FADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKWKYIHFKG 267
F +ME G+ PD + AF + GQ +++ L + K I F G
Sbjct: 623 FLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD--LMREKEIPFTG 670
>gi|297827821|ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
gi|297327632|gb|EFH58052.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
Length = 822
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 158 TMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEV 217
T Y ++L A+ K + EAES++N + + ++ M+ Y+ + K E+
Sbjct: 564 TKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCKP-DVIAYTSMLHAYNASEKWGKACEL 622
Query: 218 FADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKWKYIHFKG 267
F +ME G+ PD + AF + GQ +++ L + K + F G
Sbjct: 623 FLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD--LMREKEVPFTG 670
>gi|413924746|gb|AFW64678.1| hypothetical protein ZEAMMB73_926861 [Zea mays]
Length = 655
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 199 SRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQK 250
S MIS Y + PN+ + +F M+E G+R DE T+ + SA +G DK K
Sbjct: 352 SAMISGYVDSNQPNEALSLFNGMQECGIRSDEITMLSVISACANLGSLDKAK 403
>gi|255553021|ref|XP_002517553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543185|gb|EEF44717.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 145 QVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISL 204
++ +++ G G + + L+ + EAE +++ T+ R + ++ MIS
Sbjct: 325 EIHGYVVRTGYGNDVSVHSLLIQMYASLGYWKEAEKVFS---ETECRDVVS--WTAMISG 379
Query: 205 YDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD 247
Y+ + M +K +E + +ME G+ PDE T+ + SA +GQ D
Sbjct: 380 YEGNLMHDKALETYKNMELAGIVPDEITIACVLSACASLGQLD 422
>gi|356541064|ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 703
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 153 KGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI--SKRLFSRMISLYDHHDM 210
KG + Y+TL+ A+ K +R +EAE L+ + +T+ I ++ F+ ++ Y
Sbjct: 360 KGVSSNTIVYNTLMDAYCKSNRVEEAEGLF---VEMKTKGIKPTEATFNILMYAYSRKMQ 416
Query: 211 PNKIIEVFADMEELGVRPDEDTVRRIASAFQR 242
P + ++ A+M+E G++P+ + I SA+ +
Sbjct: 417 PEIVEKLMAEMQETGLKPNAKSYTCIISAYGK 448
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ + K G +LR + ML KG + TY++++ F K +R +EA + + ++ ++
Sbjct: 343 IGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMV-SEG 401
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQK 250
S FS +I Y + +E+F++M + G+ D T + F +VG + +
Sbjct: 402 CSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQ 461
Query: 251 LVLKKYLS 258
+ ++ +S
Sbjct: 462 DIFEEMVS 469
>gi|226507328|ref|NP_001141753.1| uncharacterized protein LOC100273888 [Zea mays]
gi|194705810|gb|ACF86989.1| unknown [Zea mays]
Length = 467
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 5/120 (4%)
Query: 125 IAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNM 184
IA A++ + + G V QV ++ T ++L+ A+ K R D + SL+
Sbjct: 215 IAVMTAIQAVSEFGHLKGVKQVHCFVYRALLEKDTKTMNSLITAYAKCGRLDLSVSLFLS 274
Query: 185 ILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
+ H S ++ MIS Y H K++E+F MEE + PD T + SA G
Sbjct: 275 LEHRDLDS-----WNSMISAYGMHGFYTKVLEMFKLMEEGNINPDGLTFSSVLSACSHAG 329
>gi|242040057|ref|XP_002467423.1| hypothetical protein SORBIDRAFT_01g027765 [Sorghum bicolor]
gi|241921277|gb|EER94421.1| hypothetical protein SORBIDRAFT_01g027765 [Sorghum bicolor]
Length = 682
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 144 IQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMIS 203
+QV ++ G + ++LL F R +AE L++ + + IS ++ MIS
Sbjct: 165 LQVTAHVVVSGLLTHVSVANSLLTMFGNLRRVQDAERLFDRM--EERDRIS---WNAMIS 219
Query: 204 LYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIAS 238
+Y H ++ +K V +DM +GVRPD T+ + S
Sbjct: 220 MYSHEEVYSKCFMVLSDMRHVGVRPDVTTLCSLVS 254
>gi|413917311|gb|AFW57243.1| hypothetical protein ZEAMMB73_018964 [Zea mays]
Length = 514
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 168 AFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVR 227
AF K D+AE +W I T+ S++++ F+ M+S+Y H + +K VF +M G +
Sbjct: 329 AFGKVGSIDQAEKIWIHIKSTKKLSLTEQ-FNSMLSVYCRHGVVDKASSVFKEMRANGCQ 387
Query: 228 PDEDTVRRIASAFQRVG 244
P+ T R +A + G
Sbjct: 388 PNAITYRHLALGCLKSG 404
>gi|302797569|ref|XP_002980545.1| hypothetical protein SELMODRAFT_420164 [Selaginella moellendorffii]
gi|300151551|gb|EFJ18196.1| hypothetical protein SELMODRAFT_420164 [Selaginella moellendorffii]
Length = 622
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Query: 146 VAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLY 205
+ K M+SKG + Y L+LAF R +E+ ++ +L + + +S ++
Sbjct: 331 LTKEMVSKGFKPSPSGYSALILAFASPARVNESWEVFQELLQQCGNVLDRETYSAFVTKL 390
Query: 206 DHHDMPNKIIEVFADM-EELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKWKYI 263
D + + + M E RPDE T++ + R G D + ++ + + +K I
Sbjct: 391 AKMDRAAEAVRAYEGMTESCDRRPDEKTLQELVGCLCRTGSVDLAQWLINQVVHDFKNI 449
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 161 TYDTLLLAFDKDHRADEAESLWN-MILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFA 219
TY+TL+ A ++ +EA ++N M+ H + ++ MIS+Y M + +F
Sbjct: 328 TYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWT--YNAMISVYGRCGMSREAGRLFK 385
Query: 220 DMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL---------KKYLSKWKYIHFKGER 269
D+E G PD T + AF R G DK K + K ++ IH G+R
Sbjct: 386 DLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKR 444
>gi|356557981|ref|XP_003547288.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 706
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 162 YDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL--FSRMISLYDHHDMPNKIIEVFA 219
Y+ L F K + AE L++ +LH R ++ L FS MIS +P+K ++ F
Sbjct: 184 YNVTLKLFRKVKDFEGAEKLFDEMLH---RGVNPNLITFSTMISCASVCSLPHKAVKWFE 240
Query: 220 DMEELGVRPDEDTVRRIASAFQRVGQDD 247
M G PD + + A+ R G D
Sbjct: 241 MMPSFGCEPDNNVCSSMIYAYTRTGNTD 268
>gi|326503836|dbj|BAK02704.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ + K Q + ++V K M S G A + TY L+ AF ++ ++AE ++ +
Sbjct: 91 INVYGKSKQPMSAMKVFKEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEE-MQQAG 149
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQK 250
++ ++ Y P E+F+ M+ +G PD + + A+ R G + +
Sbjct: 150 HEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAE 209
Query: 251 LVLK 254
V +
Sbjct: 210 AVFE 213
>gi|224107245|ref|XP_002314420.1| predicted protein [Populus trichocarpa]
gi|222863460|gb|EEF00591.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 11/169 (6%)
Query: 78 LWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPL--IAAAKALRILR 135
+++ S G G + ++ ++S V G +T F A +
Sbjct: 180 MYRLMVSTGLGPSEVTMIDLISACGRAMAIVEGQQLHCVVVKTSFDCYDFVQATVIHFYS 239
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
G+ I A + L G + + + L+ F ++ D+A L+N + S
Sbjct: 240 ACGR----INEACFQLEFGMKDHVASRNALIAGFIRNRIIDQARELFNEMPERDVFS--- 292
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
+S MIS Y D P +E+F M G+RP+E T+ + SA +G
Sbjct: 293 --WSTMISGYTQSDQPGMALELFHRMVTSGIRPNEVTMVSVFSAIAALG 339
>gi|255557995|ref|XP_002520026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540790|gb|EEF42350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1040
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 86/196 (43%), Gaps = 11/196 (5%)
Query: 53 PVSNSNANASKKNKLVVKVGKKEQ--HLWQKRDSAGSGQKALNLVRIVSELPNE-KHAVY 109
P+ NS +A K GK E L+++ G A+ + IV L N KH
Sbjct: 653 PIVNSMIDA------YAKCGKSEDAYSLYREVTDRGLNLGAVGVSIIVKALSNRGKHQEA 706
Query: 110 GALDKWTAWET-EFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLA 168
+ + + E + +A ++ + + G+ + + MLS G ++ TY+T++
Sbjct: 707 ENIVRKSIRENMDLDTVAYNIFIKAMLEAGRLHFAASIYEHMLSLGVTPSIQTYNTMISV 766
Query: 169 FDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRP 228
+ + + D+A ++N + S+ ++ + M+S Y N+ +F M+E G++P
Sbjct: 767 YGRGEKLDKAVEIFNTACSSGV-SLDEKAYMNMVSYYGKAGKRNEASLLFTKMQEEGIKP 825
Query: 229 DEDTVRRIASAFQRVG 244
+ + + F G
Sbjct: 826 GKVSYNIMIKVFAIAG 841
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 58/137 (42%), Gaps = 7/137 (5%)
Query: 124 LIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWN 183
L+ L +L K G W V + M ++G + T+ ++ + K H + +AE L+
Sbjct: 171 LVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLF- 229
Query: 184 MILHTQTRSISKRLFSRMISLYDHHDMPNKII---EVFADMEELGVRPDEDTVRRIASAF 240
+ +++ +L + H + E+FA+++ +G PD T + A+
Sbjct: 230 ---QSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAY 286
Query: 241 QRVGQDDKQKLVLKKYL 257
R G K V + L
Sbjct: 287 SRGGHPAGAKEVFETML 303
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 161 TYDTLLLAFDKDHRADEAESLWN-MILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFA 219
TY+TL+ A ++ +EA ++N M+ H + ++ MIS+Y M + +F
Sbjct: 296 TYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWT--YNAMISVYGRCGMSREAGRLFK 353
Query: 220 DMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL---------KKYLSKWKYIHFKGER 269
D+E G PD T + AF R G DK K + K ++ IH G+R
Sbjct: 354 DLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKR 412
>gi|242062404|ref|XP_002452491.1| hypothetical protein SORBIDRAFT_04g026810 [Sorghum bicolor]
gi|241932322|gb|EES05467.1| hypothetical protein SORBIDRAFT_04g026810 [Sorghum bicolor]
Length = 468
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 7/130 (5%)
Query: 145 QVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISL 204
QV M +G T Y +L+ + K +EAESLW ++ + + +
Sbjct: 199 QVLDLMREQGISPTASIYTSLIDSMYKRKMTNEAESLWKEMVESGCEPDVVTYNVKAL-Y 257
Query: 205 YDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSK----- 259
Y H P ++IEV +ME G++P+ T + ++ + G+ + K++ K
Sbjct: 258 YMAHGKPEEVIEVMTEMEAAGLKPNTITYNYLMISYCKSGKLEDAKVLYHSLAEKGCSAD 317
Query: 260 -WKYIHFKGE 268
+ Y H E
Sbjct: 318 AYTYKHMLAE 327
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Query: 109 YGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLA 168
+ D+ E ++ L+ L + G + +++ ML +G Y TLL
Sbjct: 262 FNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDG 321
Query: 169 FDKDHRADEAESLWNMILHTQTRSISKRL--FSRMISLYDHHDMPNKIIEVFADMEELGV 226
K A +LW+ IL R I+K + F+ MI+ + E F MEELG
Sbjct: 322 LFKMGDFSRALTLWDDIL---ARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGC 378
Query: 227 RPDEDTVRRIASAFQRVGQ 245
+PD T R ++ + +VG
Sbjct: 379 KPDGITYRTLSDGYCKVGN 397
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 8/155 (5%)
Query: 103 NEKHAVYGALDKWTAWETE--FPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMG 160
N+ ++Y AL + TE + L+ LR GQ R V M G T
Sbjct: 182 NKAESIYMALLEAHCVPTEDTYALL-----LRAYCNSGQLHRAEGVISEMQKNGLPPTAT 236
Query: 161 TYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFAD 220
Y+ L K +++A ++ + + R+ + ++ MI++Y P ++VF +
Sbjct: 237 VYNAYLDGLLKARCSEKAVEVYQRMKKERCRT-NTETYTLMINVYGKAKQPMSSLKVFNE 295
Query: 221 MEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
M+ +G +P+ T + +AF R G +K + V ++
Sbjct: 296 MKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEE 330
>gi|255552151|ref|XP_002517120.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543755|gb|EEF45283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 477
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 73/173 (42%), Gaps = 7/173 (4%)
Query: 78 LWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKR 137
L+++ S+ + L I+S K+ YG E F L ++ I
Sbjct: 212 LFEEMRSSNVEPDKMVLSTIISACARAKNLGYGKEVHDLIIENNFALDPHLESGLISLYA 271
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G + +AK + + + T++ + K R ++A ++N Q
Sbjct: 272 G--CGCMDMAKELFTNMSSRNLVVSTTMVSGYLKVGRIEDARLIFN-----QMDEKDLIC 324
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQK 250
+S MIS Y D P + + +F +M+ LG+ PDE T+ + SA +G D+ K
Sbjct: 325 WSIMISGYAESDQPQEALHLFNEMQFLGIEPDEVTMLSVISACAHLGVLDQAK 377
>gi|222628408|gb|EEE60540.1| hypothetical protein OsJ_13880 [Oryza sativa Japonica Group]
Length = 594
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 164 TLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEE 223
T++ + K+ + + A S++N + S +S MI+ Y P + + +F DM+
Sbjct: 241 TMVYGYAKNGKVEIAHSIFNGMPAKDVVS-----WSAMIAGYAESSKPMEALNLFHDMQR 295
Query: 224 LGVRPDEDTVRRIASAFQRVGQDDKQKLV 252
GV+PDE T+ + SA VG +K + +
Sbjct: 296 SGVKPDEITMLSVISACANVGALEKARCI 324
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Query: 135 RKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSIS 194
RK Q+ + + SKG + TY +L + + EA LW+ ++
Sbjct: 239 RKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCI 298
Query: 195 KRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLV 252
+S +I Y HH M + + F DM + G+ PD + A+ + G+ + +L+
Sbjct: 299 IA-YSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELL 355
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 199 SRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASA 239
+ MIS Y H+ + NK +EVF+ M+E G+ PD T+ I SA
Sbjct: 431 TSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSA 471
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 146 VAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLY 205
V ++L +G +T+ +TL+ + + + +++ + + R + ++ +IS+Y
Sbjct: 304 VHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFD---YMKKRDVIS--WNSLISIY 358
Query: 206 DHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKWKYIHF 265
H + K I++F +M GV P T + A G ++ K++ + L+K++ IH
Sbjct: 359 GMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYR-IHP 417
Query: 266 KGERVRVRRD 275
+ E D
Sbjct: 418 RMEHYACMVD 427
>gi|115443945|ref|NP_001045752.1| Os02g0126500 [Oryza sativa Japonica Group]
gi|41053073|dbj|BAD08017.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113535283|dbj|BAF07666.1| Os02g0126500 [Oryza sativa Japonica Group]
gi|125537906|gb|EAY84301.1| hypothetical protein OsI_05679 [Oryza sativa Indica Group]
gi|125580654|gb|EAZ21585.1| hypothetical protein OsJ_05212 [Oryza sativa Japonica Group]
Length = 427
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 169 FDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRP 228
+ K A+ ++++ I L++ +++ Y H M ++I+++ M GVRP
Sbjct: 218 YAKCGLVSHAKRVFDLAQQVNAVGIDVVLWTALLNAYGRHGMCKEVIQIYDRMVASGVRP 277
Query: 229 DEDTVRRIASAFQRVGQ 245
DE T+ + SA Q G+
Sbjct: 278 DELTILAVLSACQHAGE 294
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Query: 135 RKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSIS 194
RK Q+ + + SKG + TY +L + + EA LW+ ++
Sbjct: 239 RKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCI 298
Query: 195 KRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLV 252
+S +I Y HH M + + F DM + G+ PD + A+ + G+ + +L+
Sbjct: 299 IA-YSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELL 355
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 18/106 (16%)
Query: 168 AFDKDHRADEAESLWNMILHTQTRSIS--KRLFSRM-----------ISLYDHHDMPNKI 214
+ + +H A SL ++ +T ++ +F RM I++Y ++ MPN+
Sbjct: 231 SLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEA 290
Query: 215 IEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKW 260
+ +F MEE G++PD T IAS G D L L + L K+
Sbjct: 291 VSLFLQMEECGMKPDAVT---IASLLPACG--DLSALFLGRRLHKY 331
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 18/106 (16%)
Query: 168 AFDKDHRADEAESLWNMILHTQTRSIS--KRLFSRM-----------ISLYDHHDMPNKI 214
+ + +H A SL ++ +T ++ +F RM I++Y ++ MPN+
Sbjct: 231 SLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEA 290
Query: 215 IEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKW 260
+ +F MEE G++PD T IAS G D L L + L K+
Sbjct: 291 VSLFLQMEECGMKPDAVT---IASLLPACG--DLSALFLGRRLHKY 331
>gi|414867301|tpg|DAA45858.1| TPA: hypothetical protein ZEAMMB73_727333 [Zea mays]
Length = 805
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 5/120 (4%)
Query: 125 IAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNM 184
IA A++ + + G V QV ++ T ++L+ A+ K R D + SL+
Sbjct: 553 IAVMTAIQAVSEFGHLKGVKQVHCFVYRALLEKDTKTMNSLITAYAKCGRLDLSVSLFLS 612
Query: 185 ILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
+ H S ++ MIS Y H K++E+F MEE + PD T + SA G
Sbjct: 613 LEHRDLDS-----WNSMISAYGMHGFYTKVLEMFKLMEEGNINPDGLTFSSVLSACSHAG 667
>gi|357444861|ref|XP_003592708.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355481756|gb|AES62959.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 1430
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 52/105 (49%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K G+ + ++ + M G + T+ L+ F K+ R D+A L++ + + +
Sbjct: 242 KLGEVDKAFELVERMGECGMRLSEKTFCVLIHGFVKESRVDKALQLFDKMRREDSFTPDV 301
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAF 240
L+ +I + ++ I +F++M+E GVRPD + ++ S F
Sbjct: 302 SLYDVLIGGLCKNKDTDRAISLFSEMKEFGVRPDIGILTKLISCF 346
>gi|302833221|ref|XP_002948174.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
gi|300266394|gb|EFJ50581.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
Length = 1001
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 133 ILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRS 192
+ K GQW R I V M +G + TY+TL++A + ++ EA +++ +L + +
Sbjct: 223 VYGKLGQWERAIHVLDVMKHEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLL-SDGFT 281
Query: 193 ISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
+ ++ +IS Y K +EV+ +M + T + SA ++ GQ
Sbjct: 282 PNSTTYNALISAYGKTTQLGKALEVYQEMLRQNMDRSVITYSSLISACEKAGQ 334
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Query: 102 PNEKHAVYGAL--DKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATM 159
P E AVY L D +T T + + +A K Q + ++V + ML + ++
Sbjct: 265 PREALAVYQRLLSDGFTPNSTTYNALISAYG-----KTTQLGKALEVYQEMLRQNMDRSV 319
Query: 160 GTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL-FSRMISLYDHHDMPNKIIEVF 218
TY +L+ A +K + + A ++N + Q + + + ++ +++ K EVF
Sbjct: 320 ITYSSLISACEKAGQWETALRIFNEM--QQDKCVPNTVTYNSLVTACAQGGQWEKAAEVF 377
Query: 219 ADMEELGVRPDEDTVRRIASAFQRVGQ 245
M G PD T + SA++R GQ
Sbjct: 378 EQMNAHGCTPDVVTYTALISAYERGGQ 404
>gi|449459744|ref|XP_004147606.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Cucumis sativus]
gi|449529850|ref|XP_004171911.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Cucumis sativus]
Length = 580
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 164 TLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEE 223
TL+ + K + A L++ + ++ +S F+ MI+ Y + MPNK +E+F M +
Sbjct: 268 TLIAGYSKLGEVNSAYELFDKMEESEKELLS---FNAMIACYSQNSMPNKALELFNLMLQ 324
Query: 224 --LGVRPDEDTVRRIASAFQRVG 244
+ ++PDE T + SA ++G
Sbjct: 325 PHVNIQPDEMTFASVISACTQLG 347
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G+ ++ M G GAT+ TY++L+ K + EAE ++ +I T T +
Sbjct: 431 GKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLI--TSTGHCPDVI 488
Query: 198 -FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKL 251
++ +IS Y + K +E++ M++LG++P +T + S + G K+ L
Sbjct: 489 TYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETL 543
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 17/153 (11%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI-- 193
+ G R +V + G TY L+ F K + + AE L + Q R +
Sbjct: 250 RAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEML---LTDMQLRGVGH 306
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ-DDKQKL- 251
++ +F+ MI Y H M +K +E+ A ME +G++ D T +A RV + +D +KL
Sbjct: 307 NQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLL 366
Query: 252 -------VLKKYLSKWKYIHF---KGERVRVRR 274
V Y+S I +G+ V RR
Sbjct: 367 HIMTENGVESNYVSYTTLISIHSKEGDMVEARR 399
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Query: 142 RVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRM 201
RV +V K M S G T+GTY L+ + ES+++ I +S +
Sbjct: 186 RVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAG-DVYFYSAV 244
Query: 202 ISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
I+ Y + EVF + G+ P+E T + + F ++GQ + +++L
Sbjct: 245 INAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLL 296
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L K G+ + M+ KG + +Y LL + ++L+N+++ +
Sbjct: 339 LCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMV-CEGVVP 397
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD 247
+ +F+ +I+ Y M +K + +F DM + GV PD T + SAF R+G+ D
Sbjct: 398 DRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLD 451
>gi|303280720|ref|XP_003059652.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458307|gb|EEH55604.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 196
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 139 QWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNM--ILHTQTRSISKR 196
QW + ++V + M ++G A + TY L+ A K + D+A ++ + + + I+
Sbjct: 42 QWKKALEVFEEMRAEGVEANIYTYSALISACAKGKQLDKALEIFELCKVNGVEPDGIT-- 99
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
+ MIS + +K +E+F M++ G+ + T + +A +R G+ D + V
Sbjct: 100 -YGAMISACEKGRRVDKALEIFVQMKKAGMEANAITYNALLAACERAGKADDAREVF 155
>gi|356536609|ref|XP_003536829.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Glycine max]
Length = 787
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 133 ILRKRGQWLRVIQVAKWMLSKGQ-GATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTR 191
IL+ + W R +Q+ +W +KG+ + Y+ +L + + D ESLW ++ +
Sbjct: 99 ILKAQVSWQRALQIFEWFKNKGRYDLNVIHYNIMLCTLGRARKWDLVESLWTE-MNAKGV 157
Query: 192 SISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKL 251
+ + +I Y + + + M+ G+ PDE T+ + ++R G+ K +
Sbjct: 158 APVNSTYGTLIDAYSKGGLKEEALAWLQRMQSQGMEPDEVTMGIVVLLYKRAGEFQKAQE 217
Query: 252 VLKKYL 257
++++
Sbjct: 218 FFRRWM 223
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/119 (18%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
+ G + + + ++ GQ + +Y+T++ ++ K + A +++ ++ + S
Sbjct: 585 REGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDS- 643
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLK 254
++ + Y + M + + V M + G +PDE T R + A+ ++G+ ++ + +LK
Sbjct: 644 FTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILK 702
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Query: 164 TLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEE 223
T +L + K DEAE + + H S F+ MIS+Y M +K + FA +
Sbjct: 508 TFVLVYSKCSLVDEAEDAFLAMRHHGYLS-DTSTFNAMISMYGKKGMMDKATDTFALLRS 566
Query: 224 LGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLS 258
G+ PD T + + R G K + L++ ++
Sbjct: 567 TGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMA 601
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/133 (18%), Positives = 58/133 (43%), Gaps = 34/133 (25%)
Query: 150 MLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMI-----------------LHTQTRS 192
M+SKG + TY +LL A+ + + ++A ++N + +H + ++
Sbjct: 284 MVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKN 343
Query: 193 ISKRLF-----------------SRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRR 235
S+ + + ++ + + M +++++VF M++ G PD+ T
Sbjct: 344 FSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNI 403
Query: 236 IASAFQRVGQDDK 248
+ A+ R G D+
Sbjct: 404 LIEAYGRCGSSDQ 416
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
+ G + + +V M G+ + TY+TLL ++ K R D+A ++ ++ + R
Sbjct: 682 REGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRP-DN 740
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQK 250
F+ ++ Y + + + V M E G +P + T + + + R ++K
Sbjct: 741 FTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGYNRNASPSRKK 795
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 2/130 (1%)
Query: 131 LRILRKRG-QWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQ 189
L + KRG W R+ + + M TY+T++ A ++ EA L+ +
Sbjct: 255 LDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAG 314
Query: 190 TRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQ 249
++ ++ ++ +Y M + E+ +ME G+ P+ T + +A+ R G D+
Sbjct: 315 C-CPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEA 373
Query: 250 KLVLKKYLSK 259
+ K LSK
Sbjct: 374 AALKKSLLSK 383
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L K G+ + M+ KG + +Y LL + ++L+N+++ +
Sbjct: 268 LCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMV-CEGVVP 326
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD 247
+ +F+ +I+ Y M +K + +F DM + GV PD T + SAF R+G+ D
Sbjct: 327 DRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLD 380
>gi|388499386|gb|AFK37759.1| unknown [Lotus japonicus]
Length = 500
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ + K G+ ++V MLS + TY L+ AF ++ ++AE ++ Q
Sbjct: 274 INLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVFE---QMQE 330
Query: 191 RSISKRLFSR--MISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
+ ++S ++ Y P E+F+ M+ +G PD + + A+ R G
Sbjct: 331 AGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAG 386
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 125 IAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNM 184
+ + + L K G+ + ML+KG + +Y TLL + + +L+N+
Sbjct: 317 VTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNL 376
Query: 185 ILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
++ ++ +F+ +++ Y M + + +F DM++ G+ PD T + AF R+G
Sbjct: 377 MVRDGIVP-NQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMG 435
Query: 245 QDD 247
D
Sbjct: 436 SMD 438
>gi|260655145|ref|ZP_05860633.1| periplasmic [Fe] hydrogenase, large subunit [Jonquetella anthropi
E3_33 E1]
gi|424844979|ref|ZP_18269590.1| hydrogenase, Fe-only [Jonquetella anthropi DSM 22815]
gi|260630067|gb|EEX48261.1| periplasmic [Fe] hydrogenase, large subunit [Jonquetella anthropi
E3_33 E1]
gi|363986417|gb|EHM13247.1| hydrogenase, Fe-only [Jonquetella anthropi DSM 22815]
Length = 577
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 98 VSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGA 157
V P +KH +D T+ +FPLI R K + +R +QV +
Sbjct: 118 VHSTPFKKH-----IDDRTS-NPDFPLI------RDYSKCIKCMRCVQVCDKIQHSNVWD 165
Query: 158 TMGTYDTLLLAFDKDHRADEAESLW--NMILHTQTRSISKRLFSRMISLYDHHDMPNKII 215
+ + T+ + K +R ++A + I H ++ +R ++ L D D P+KI+
Sbjct: 166 VVNSGGTITVDVGKAYRLEDAPCVLCGQCITHCPVGALHERDDTQ--KLMDAIDDPDKIV 223
Query: 216 EV-------FADMEELGVRPDEDTVRRIASAFQRVGQD 246
V A EE G++P+E TV R+ASA + +G D
Sbjct: 224 LVQIAPAIRTAWCEEFGMKPEEATVNRLASALRIIGFD 261
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L K G+ + +V M+ KG Y TLL + + + L ++++ T+
Sbjct: 286 LCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQP- 344
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD 247
+F+ +I Y H M ++ + F+ M + G+ P+ T + A RVG+ D
Sbjct: 345 DHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVD 398
>gi|125585400|gb|EAZ26064.1| hypothetical protein OsJ_09917 [Oryza sativa Japonica Group]
Length = 552
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Query: 162 YDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADM 221
Y+ L A K R +AE+LW +L + FS +IS MP K +E F M
Sbjct: 28 YNVALKALRKRRRWSDAEALWEEMLREGVQP-DNATFSTVISCARACGMPGKAVEWFEKM 86
Query: 222 EELGVRPDEDTVRRIASAFQR 242
+ G PD T + A+ R
Sbjct: 87 PDFGCSPDMLTYSAVIDAYGR 107
>gi|413953500|gb|AFW86149.1| hypothetical protein ZEAMMB73_846563 [Zea mays]
Length = 1039
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 87/193 (45%), Gaps = 9/193 (4%)
Query: 69 VKVGKKEQ--HLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWT--AWETEFPL 124
K G+ E HL+ + GS + A+ +V+ L KH + ++ + E L
Sbjct: 687 CKCGRAEDAYHLFMEMADQGSYRNAVTASILVTHLT--KHGKFQEVENIMHGCFRDEVQL 744
Query: 125 IAAA--KALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLW 182
A ++ + + G+ + + M+S G +M T++T++ + K + D+A ++
Sbjct: 745 DTALYNTFIKSMLESGKLHSAVSIYDRMVSSGVSQSMQTFNTMISVYGKGGKLDKAVEMF 804
Query: 183 NMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQR 242
I +++++ M+SLY + +F M+E G+RP + + + +A+
Sbjct: 805 AAA-QELGLPIDEKMYTNMLSLYGKAGRHQEASLMFKRMKEDGIRPGKISFNSMINAYAT 863
Query: 243 VGQDDKQKLVLKK 255
G + K V ++
Sbjct: 864 SGLFSEAKSVFQE 876
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K G+ + ++ M+ K + TY L+ A+ K +EAE L+ L +TR+I
Sbjct: 779 KHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLF---LDMETRNIIP 835
Query: 196 RLFSRMISLYDHHDMPN--KIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
+ L ++ + N K+I +F DME G+ D +ASA+ + G+ + +L
Sbjct: 836 NTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLL 895
Query: 254 KKYL 257
K L
Sbjct: 896 NKSL 899
>gi|356528278|ref|XP_003532731.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Glycine max]
Length = 1079
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/179 (18%), Positives = 84/179 (46%), Gaps = 5/179 (2%)
Query: 70 KVGKKEQHLWQKRDSAGSGQK--ALNLVRIVSELPNE-KHAVYGALDKWTAWET-EFPLI 125
K GK+E+ + + G G+ A+ + V+ L N KH + + + E E +
Sbjct: 729 KCGKQEKAYLLYKQATGEGRDLGAVGISIAVNSLTNGGKHQEAENIVQRSLEENLELDTV 788
Query: 126 AAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMI 185
A ++ + + G+ + + M+S G ++ T++T++ + +D + D A ++N
Sbjct: 789 AYNTFIKAMLEAGKLHFASSIFEHMISSGVAPSIETFNTMISVYGQDQKLDRAVEMFNQA 848
Query: 186 LHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
+ + + ++ + +I Y + + ++F+ M+E G++P + + + + + G
Sbjct: 849 -SSCSVPLDEKTYMNLIGYYGKAGLMLEASQLFSKMQEGGIKPGKVSYNIMINVYANAG 906
>gi|357138821|ref|XP_003570985.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Brachypodium distachyon]
Length = 613
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ + K Q + +++ M S G A + TY L+ AF ++ ++AE ++ +
Sbjct: 299 INVYGKSKQPMSAMKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQ-MQQAG 357
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
++ ++ Y P E+F+ M+ +G PD + + A+ R G
Sbjct: 358 HEPDVYAYNALMEAYSRAGFPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAG 411
>gi|356560497|ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Glycine max]
Length = 490
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 63/141 (44%), Gaps = 1/141 (0%)
Query: 108 VYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLL 167
VY LD+ A +I + L K ++ ++V + M S G +++L+
Sbjct: 266 VYELLDEMQAQGCSANVITYTSIMCALGKAKKFEEALKVPERMRSSGCRPDTLFFNSLIH 325
Query: 168 AFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEEL-GV 226
+ R D+A ++ + + S + ++ MIS++ +H + +E+ +ME G
Sbjct: 326 TLGRAGRLDDAADVFKVEMPKAGVSPNTSTYNSMISMFCYHAQEKRALEILKEMENSGGC 385
Query: 227 RPDEDTVRRIASAFQRVGQDD 247
+PD T + + R G+ D
Sbjct: 386 KPDAQTYHPLIKSCFRSGKID 406
>gi|242078281|ref|XP_002443909.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
gi|241940259|gb|EES13404.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
Length = 521
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 161 TYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFAD 220
++ + AF K D+AE +W I T+ S++++ F+ ++S+Y H + +K VF +
Sbjct: 329 SFTVAIEAFGKVGSIDQAEKIWVQIKSTKKLSLTEQ-FNSILSVYCRHGVVDKASSVFKE 387
Query: 221 MEELGVRPDEDTVRRIASAFQRVG 244
M G +P+ T R +A + G
Sbjct: 388 MRANGCQPNAITYRHLALGCLKSG 411
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K G+ + ++ M+ K + TY L+ A+ K +EAE L+ L +TR+I
Sbjct: 812 KHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLF---LDMETRNIIP 868
Query: 196 RLFSRMISLYDHHDMPN--KIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
+ L ++ + N K+I +F DME G+ D +ASA+ + G+ + +L
Sbjct: 869 NTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLL 928
Query: 254 KKYL 257
K L
Sbjct: 929 NKSL 932
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 52/115 (45%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+R K G + +QV M S G ++ T+++LLL K R + A+S+++ +L T
Sbjct: 163 IRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYG 222
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
+ F+ +I + + M ++ F +M PD T + R G+
Sbjct: 223 VTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGK 277
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 142 RVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRM 201
R IQ + M+S+G + TY+T+L A KD + D A L N L ++ S ++ +
Sbjct: 174 RAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQ-LSSKGCSPVLITYNTV 232
Query: 202 ISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
I ++ +E+ +M G++PD T + + R G+
Sbjct: 233 IDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGK 276
>gi|356521277|ref|XP_003529283.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Glycine max]
Length = 379
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Query: 124 LIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWN 183
L+ ++ ++G + + V + + KG T++TLL R +E E +W
Sbjct: 162 LVTYNTIIKAFCEKGSFDSALSVLREIEEKGLSPDSITFNTLLDGLYSKGRFEEGEKVWE 221
Query: 184 MILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRV 243
+ + S+++ L + + +E+F +ME++GV+PD + + F
Sbjct: 222 QMSVNNVAPGVRSYCSKLVGLAEVKK-AGEAVELFREMEKVGVKPDLFCINAVIKGFVNE 280
Query: 244 GQDDKQK 250
G D+ K
Sbjct: 281 GNLDEAK 287
>gi|302763819|ref|XP_002965331.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
gi|300167564|gb|EFJ34169.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
Length = 806
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 177 EAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRI 236
EA +++ IL +S F+ MIS Y H+ P + +E+F +M GV P+E T +
Sbjct: 406 EAREVFDSILENSKTVVS---FTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATV 462
Query: 237 ASAFQRVG 244
+A +G
Sbjct: 463 LAACVAIG 470
>gi|2632061|emb|CAA05629.1| membrane-associated salt-inducible protein like [Arabidopsis
thaliana]
Length = 428
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G + I++ + M KG T + T+L + K + A++LWN ++ +
Sbjct: 204 GTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAY 263
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLV 252
R++S + P ++ E+ +M +G++PD + + +A+ G D+ K V
Sbjct: 264 NVRIMSA--QKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKV 316
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G + I++ M+SKG T TY+TL+ + K+ +AD AE L +L ++++
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF-NVNQGS 437
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
F+ +I L H M + + +M + P + + S + G+ K
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488
>gi|413922815|gb|AFW62747.1| hypothetical protein ZEAMMB73_141955 [Zea mays]
Length = 301
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 199 SRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQK 250
S MIS Y + PN+ + +F M+E G+R DE T+ + SA +G +K K
Sbjct: 111 SAMISGYVDSNQPNEALSLFNGMQECGIRSDEVTMLSVISACANLGSLNKAK 162
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G + I++ M+SKG T TY+TL+ + K+ +AD AE L +L ++++
Sbjct: 392 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF-NVNQGS 450
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
F+ +I L H M + + +M + P + + S + G+ K
Sbjct: 451 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 501
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G + I++ M+SKG T TY+TL+ + K+ +AD AE L +L ++++
Sbjct: 368 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF-NVNQGS 426
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
F+ +I L H M + + +M + P + + S + G+ K
Sbjct: 427 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 477
>gi|15234493|ref|NP_195386.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181418|sp|Q9M065.1|PP352_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g36680, mitochondrial; Flags: Precursor
gi|2464912|emb|CAB16807.1| salt-inducible like protein [Arabidopsis thaliana]
gi|7270616|emb|CAB80334.1| salt-inducible like protein [Arabidopsis thaliana]
gi|17381286|gb|AAL36061.1| C7A10_680/C7A10_680 [Arabidopsis thaliana]
gi|24111267|gb|AAN46757.1| At4g36680/C7A10_680 [Arabidopsis thaliana]
gi|332661286|gb|AEE86686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 412
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G + I++ + M KG T + T+L + K + A++LWN ++ +
Sbjct: 188 GTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAY 247
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLV 252
R++S + P ++ E+ +M +G++PD + + +A+ G D+ K V
Sbjct: 248 NVRIMSA--QKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKV 300
>gi|356545987|ref|XP_003541414.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 613
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 193 ISKRLFSRM-----------ISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQ 241
+++RLF +M IS Y H + +E+F ++E+LG+ PDE V SA
Sbjct: 268 VARRLFDQMGERDVVSWTAMISGYCHAGCFQEALELFVELEDLGMEPDEVVVVAALSACA 327
Query: 242 RVGQDDKQKLVLKKY-LSKWKYIHFKGERVRVRRDAWYESGS 282
R+G + + + KY W+ H +G V D + + GS
Sbjct: 328 RLGALELGRRIHHKYDRDSWQCGHNRGFTCAV-VDMYAKCGS 368
>gi|224144700|ref|XP_002325381.1| predicted protein [Populus trichocarpa]
gi|222862256|gb|EEE99762.1| predicted protein [Populus trichocarpa]
Length = 1071
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 53 PVSNSNANASKKNKLVVKVGKKEQH--LWQKRDSAGSGQKALNLVRIVSELPNE-KHAVY 109
P+ NS +A VK GK E+ L+++ G A+ + +V+ L N KH
Sbjct: 700 PIINSMIDAC------VKCGKFEEAYLLYEEVAQRGHNLGAVGIGMVVNALTNSGKHPEA 753
Query: 110 GALDKWTAWE-TEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLA 168
+ + + + E +A ++ + + G+ + + ML G ++ TY+T++
Sbjct: 754 ENIIRRSIQDRMELDTVAYNIFIKAMLEAGRLHFATSIYEHMLLLGFTPSIQTYNTMISV 813
Query: 169 FDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRP 228
+ + + D+A ++N + S+ ++ + MI+ Y ++ +FA M+E G++P
Sbjct: 814 YGRGRKLDKAVEVFNTACSSGV-SLDEKAYMNMINYYGKAGKRHEASLLFAKMQEEGIKP 872
Query: 229 DEDTVRRIASAFQRVG 244
+ +A + G
Sbjct: 873 GVVSYNVMAKVYAMSG 888
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 15/98 (15%)
Query: 178 AESLWNMILHTQTRSISKRLFSRM-----------ISLYDHHDMPNKIIEVFADMEELGV 226
SL M L+ + +++LFSRM IS Y+++ +P+K I+ + M++ V
Sbjct: 335 CNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSV 394
Query: 227 RPDEDTVRRIASAFQRVGQDDK----QKLVLKKYLSKW 260
+PDE TV + SA +G D KL +K L +
Sbjct: 395 KPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 432
>gi|302819880|ref|XP_002991609.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
gi|300140642|gb|EFJ07363.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
Length = 356
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 152 SKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMP 211
S+G T+ +Y+ ++ AF K+ D+ E + ++ + R F+ +I+ Y P
Sbjct: 91 SRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRP-DLFSFNALIAAYAMSRKP 149
Query: 212 NKIIEVFADMEELGVRPDEDTVRRIASAFQR 242
+ ++VF++M+ GV PD T + F R
Sbjct: 150 ERGLQVFSNMKAAGVLPDIVTYTTLIQMFSR 180
>gi|297737368|emb|CBI26569.3| unnamed protein product [Vitis vinifera]
Length = 392
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 142 RVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRM 201
+ +++ M + G ++G+Y T++ A R EAE+++ ++H + +L R+
Sbjct: 84 KAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREMVH-----LGLKLDLRV 138
Query: 202 ISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
I +Y + M K +E+ ++ E+GV D+ I F + G+ + V +K
Sbjct: 139 IGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVFEK 192
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G+ +Q + M+ +G T+ TY+ L+ A D RA +A + ++ Q S +
Sbjct: 233 GKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDA---YAVLEEMQKNGFSPDV 289
Query: 198 FSR--MISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
F+ +I+ Y K +EVF +M + GVR T + F R GQ
Sbjct: 290 FTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQ 339
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K G + ++V + M KG AT TY +L+ F + + E + L+N+ + R
Sbjct: 301 KEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRP-DV 359
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
+++ +I+ + + E+ A+ME+ + PD+ T + F +G+ D+ + ++ +
Sbjct: 360 VMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDE 419
>gi|357487731|ref|XP_003614153.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515488|gb|AES97111.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 691
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 150 MLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDH-H 208
M KG + Y+TL+ A+ K +R +EAE L+ + + + I + I +Y +
Sbjct: 345 MEKKGISSNAIVYNTLMDAYCKSNRVEEAEGLF---VEMKAKGIKPTAVTFNILMYAYSR 401
Query: 209 DMPNKIIE-VFADMEELGVRPDEDTVRRIASAFQR 242
M KI+E + A+M++ G++P+ ++ + SA+ R
Sbjct: 402 RMQPKIVESLLAEMKDFGLKPNANSYTCLISAYGR 436
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 15/98 (15%)
Query: 178 AESLWNMILHTQTRSISKRLFSRM-----------ISLYDHHDMPNKIIEVFADMEELGV 226
SL M L+ + +++LFSRM IS Y+++ +P K I+ + M++ V
Sbjct: 335 CNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSV 394
Query: 227 RPDEDTVRRIASAFQRVGQDDK----QKLVLKKYLSKW 260
+PDE TV + SA +G D KL +K L +
Sbjct: 395 KPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 432
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 124 LIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWN 183
+I + L K Q + I + K + +G A M TY+ L+ KD R +A+ ++
Sbjct: 399 VITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQ 458
Query: 184 MILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRV 243
+L + ++ +S MI+ + ++ + + + ME+ G PD I +AF
Sbjct: 459 DLL-MKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEK 517
Query: 244 GQDDKQKLVLKKYLSKWKY 262
+DK + +L++ + Y
Sbjct: 518 DMNDKAEKLLREMIDCVDY 536
>gi|296084128|emb|CBI24516.3| unnamed protein product [Vitis vinifera]
Length = 970
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 154 GQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNK 213
G AT+ Y TL + R +EAE L+ + ++ I K +++ +I Y
Sbjct: 109 GLPATIHLYKTLFYGLCRQERVEEAE-LFVGEMESEGHFIDKMMYTSLIHGYCRGKKMRT 167
Query: 214 IIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKW 260
+ VF M ++G PD T + F ++G DK +L +S+W
Sbjct: 168 AMRVFLRMLKMGCDPDTYTYNTLIHGFVKLGLFDK-GWILHNQMSEW 213
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 7/118 (5%)
Query: 123 PLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLW 182
PLIA L ++G +++ + M G + T+ TL+ F KD DEA L+
Sbjct: 445 PLIAG------LCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLF 498
Query: 183 NMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAF 240
+ ++ + ++ F+ MI Y K +++ M + G+ PD T R + S
Sbjct: 499 DKMIDSSVVP-NEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVL 555
>gi|357120648|ref|XP_003562037.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Brachypodium distachyon]
Length = 807
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K GQ +V ML +G + T++TL+ + K HR ++ SL M+ Q
Sbjct: 265 KAGQLEKVSDAFSQMLREGVVPDIFTFNTLIHVWGKHHRMEQVSSLVRMMEEFQCLP-DT 323
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
R ++ +ISLY D + F M+ + PD + R + + G K + ++K+
Sbjct: 324 RTYNILISLYREIDEIDVAEFYFCKMKAENLVPDTVSCRTLLYGYSTRGMVTKAEALIKE 383
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/128 (20%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Query: 133 ILRKRGQWLRVIQVAKWML-SKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTR 191
IL+++ W R +++ W + + Y+ +L + R D LW+ +H+
Sbjct: 114 ILKEQKDWRRAVEIFDWFRRERCHELNVIHYNVVLCVVGRATRWDLVVGLWHQ-MHSCGV 172
Query: 192 SISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKL 251
+ +I +Y + DM + G+ PDE T+ + A+++ G+ +K +L
Sbjct: 173 VPENATYGTLIDVYCKGGRERAALLWLGDMCKRGLVPDEVTMSTVLQAYKKAGEYEKAEL 232
Query: 252 VLKKYLSK 259
+++ S+
Sbjct: 233 FFRRWSSE 240
>gi|359490245|ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like [Vitis vinifera]
Length = 1101
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 154 GQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNK 213
G AT+ Y TL + R +EAE L+ + ++ I K +++ +I Y
Sbjct: 229 GLPATIHLYKTLFYGLCRQERVEEAE-LFVGEMESEGHFIDKMMYTSLIHGYCRGKKMRT 287
Query: 214 IIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKW 260
+ VF M ++G PD T + F ++G DK +L +S+W
Sbjct: 288 AMRVFLRMLKMGCDPDTYTYNTLIHGFVKLGLFDK-GWILHNQMSEW 333
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 145 QVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISL 204
+V +++ G A + ++L+ DEAE +++ + S ++ MIS
Sbjct: 317 EVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVS-----WTAMISG 371
Query: 205 YDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
Y+ + +P K +E + ME GV PDE T+ + SA +G DK
Sbjct: 372 YEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDK 415
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 142 RVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRM 201
R I+ M+S+G + TY+TLL A KD + D A + N L ++ S ++ +
Sbjct: 240 RAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ-LSSKGCSPVLITYNTV 298
Query: 202 ISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
I + I++ +M G++PD T + S R G+ D+
Sbjct: 299 IDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDE 345
>gi|168030898|ref|XP_001767959.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680801|gb|EDQ67234.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 957
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G+ +++ M KG T T++TLL F + ++A ++N ++ + ++
Sbjct: 366 GRHAEALKLFDVMAEKGLLTTRMTWNTLLHCFVRIGDVEQATKVYNDMVEAGSANVVT-- 423
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
+ MI+LY M + A+M E GV+PDE + DK +V+++
Sbjct: 424 YGNMINLYSKFQMVEDAENLLAEMRESGVKPDEYIYGSFVKLYCNSDMIDKATMVVQE 481
>gi|302776756|ref|XP_002971525.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
gi|300160657|gb|EFJ27274.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
Length = 356
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 152 SKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMP 211
S+G T+ +Y+ ++ AF K+ D+ E + ++ + R F+ +I+ Y P
Sbjct: 91 SRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRP-DLFSFNALIAAYAMSRKP 149
Query: 212 NKIIEVFADMEELGVRPDEDTVRRIASAFQR 242
+ ++VF++M+ GV PD T + F R
Sbjct: 150 ERGLQVFSNMKAAGVLPDIVTYTTLIQMFSR 180
>gi|242091740|ref|XP_002436360.1| hypothetical protein SORBIDRAFT_10g001070 [Sorghum bicolor]
gi|241914583|gb|EER87727.1| hypothetical protein SORBIDRAFT_10g001070 [Sorghum bicolor]
Length = 999
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L K G+ I + M+S G +M T++ ++ F K + D+A ++ I
Sbjct: 722 LTKHGKLHSAISIYDRMISSGTSQSMQTFNLMISVFGKGGKLDKAVEMFAAA-QELGLPI 780
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
+++++ M+SLY + +F M+E G+RP + + + +A+ G
Sbjct: 781 DEKMYTNMLSLYGKAGRHQEASLMFKRMKEDGIRPGKISFNSMINAYATSG 831
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 150 MLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHD 209
M+ +G T L+ K + A S+++ ++ + T S S + F+ MIS++
Sbjct: 703 MVDQGSNRDAVTVSILVTHLTKHGKLHSAISIYDRMISSGT-SQSMQTFNLMISVFGKGG 761
Query: 210 MPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
+K +E+FA +ELG+ DE + S + + G+ + L+ K+
Sbjct: 762 KLDKAVEMFAAAQELGLPIDEKMYTNMLSLYGKAGRHQEASLMFKR 807
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 199 SRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQK 250
S MIS Y D P + + +F +M+ LG++PD+ T+ + +A +G D+ K
Sbjct: 324 SAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAK 375
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 145 QVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISL 204
+V +++ G A + ++L+ DEAE +++ + S ++ MIS
Sbjct: 317 EVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVS-----WTAMISG 371
Query: 205 YDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
Y+ + +P K +E + ME GV PDE T+ + SA +G DK
Sbjct: 372 YEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDK 415
>gi|297808589|ref|XP_002872178.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318015|gb|EFH48437.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 8/126 (6%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI--SK 195
G +Q M G T TY+TL+ + + + + +L +++L + +
Sbjct: 123 GNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSALLDLMLEESNVDVRPNI 182
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK------Q 249
R F+ ++ + + EV MEE GVRPD T IA+ + + G+ + +
Sbjct: 183 RTFNVLVQAWCKKKKVEEAWEVVHKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVE 242
Query: 250 KLVLKK 255
K+V+K+
Sbjct: 243 KMVMKE 248
>gi|15226322|ref|NP_180372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75268044|sp|Q9ZUU7.1|PP174_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g28050
gi|4063753|gb|AAC98461.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|20197952|gb|AAM15326.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330252979|gb|AEC08073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 146 VAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLY 205
V K M + + +Y L+ F + +EAE L +++H + + L++ +++ Y
Sbjct: 268 VLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLV-LMMHDKKLRVESYLYNLIMNGY 326
Query: 206 DHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
+ K+IE++++M GV P++DT + + + G+
Sbjct: 327 SRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGK 366
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 127 AAKALRILRKRGQWLRVIQVAKW-------------------MLSKGQGATMGTYDTLLL 167
AAK R ++KRG ++ + M +KG + +Y TLL
Sbjct: 354 AAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLH 413
Query: 168 AFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVR 227
+ + + L+N + + + + +F+ +I Y M + + +F +M++ GV
Sbjct: 414 GYASEGCFADMIGLFNS-MKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVS 472
Query: 228 PDEDTVRRIASAFQRVGQ 245
PD T + S F R+G+
Sbjct: 473 PDVVTYSTVISTFSRMGR 490
>gi|30689969|ref|NP_197945.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|357528836|sp|Q8GZ63.2|PP397_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g25630
gi|332006092|gb|AED93475.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 574
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 8/126 (6%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK-- 195
G +Q M G T TY+TL+ + + + + L +++L +
Sbjct: 129 GNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNI 188
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK------Q 249
R F+ ++ + + EV MEE GVRPD T IA+ + + G+ + +
Sbjct: 189 RTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVE 248
Query: 250 KLVLKK 255
K+V+K+
Sbjct: 249 KMVMKE 254
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
L L ++G+ V + M+S G + TY TL+ F + D+A L+ ++
Sbjct: 199 LNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGC 258
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQK 250
R + ++ ++ P++ E+F M E G PD+ T + F VG+ ++
Sbjct: 259 RP-NAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAV 317
Query: 251 LVLKKYLSK 259
V + +SK
Sbjct: 318 EVFDEMVSK 326
>gi|168049914|ref|XP_001777406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671255|gb|EDQ57810.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 5/154 (3%)
Query: 93 NLVRIVSELPNEKHAVYGALDKWTAWETEFPL--IAAAKALRILRKRGQWLRVIQVAKWM 150
++V I++ L + K A+ +L KW E F L L++LR+ QW Q+A+ M
Sbjct: 12 DVVAILNTLKSWKVAL--SLFKWLQAEQNFNLNIYTYNVMLKVLRRGQQWELSQQIAEDM 69
Query: 151 LSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDM 210
++ G TY TL+ ++ + D A + W +H +S MI +Y
Sbjct: 70 INAGIRPDNITYSTLISCANRCNYQDAAMA-WFDRMHDAQCVPDAVTYSTMIDVYGKVGK 128
Query: 211 PNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
++ + ++ +++ G +PD+ T + F R G
Sbjct: 129 YDEAVALYESVKKSGWKPDKVTYGTMVRLFGRAG 162
>gi|168032379|ref|XP_001768696.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679988|gb|EDQ66428.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 211
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Query: 109 YGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLA 168
YGA T +E + + + K+G V + + M G A G++D LLLA
Sbjct: 52 YGAKPDPTTYE---------RLMHLHAKKGHAELVEDIFQQMREAGVDAKCGSFDALLLA 102
Query: 169 FDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRP 228
+ + + D+A S++ + S+ F+ +I + ++++ D+ E RP
Sbjct: 103 YCRAGKPDQALSVFREYKLSMKPSLVA--FNMIIDACGKAGRDEEAVQLYVDLIECRYRP 160
Query: 229 DEDTVRRIASAFQRVGQDDKQKLVLKKYLS 258
D T + SA + G+ +K + ++ LS
Sbjct: 161 DTVTYTSLISAVVQAGRYEKADELYRRMLS 190
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 63/151 (41%), Gaps = 17/151 (11%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKR- 196
G R +V + G TY L+ F K + + AE L + Q R +
Sbjct: 267 GNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEML---LADMQLRGVGHNQ 323
Query: 197 -LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ-DDKQKL--- 251
+F+ MI Y H M K +E+ A ME++G+ D T +A RV + +D +KL
Sbjct: 324 IVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHI 383
Query: 252 -----VLKKYLSKWKYIHF---KGERVRVRR 274
V Y+S I +G+ V RR
Sbjct: 384 MAEKGVAPNYVSYTTLISIHAKEGDMVEARR 414
>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMI----LHTQTR 191
K G R ++ S G T ++LA R EAE+L+ I L +TR
Sbjct: 253 KAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTR 312
Query: 192 SISKRL--FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQ 249
+ + L + R SL D V ++ME+ GV+PDE T + + G+ +
Sbjct: 313 AYNALLKGYVRTGSLKDAE-------FVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESA 365
Query: 250 KLVLKK 255
++VLK+
Sbjct: 366 RIVLKE 371
>gi|26449475|dbj|BAC41864.1| unknown protein [Arabidopsis thaliana]
gi|29028966|gb|AAO64862.1| At5g25630 [Arabidopsis thaliana]
Length = 574
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 8/126 (6%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK-- 195
G +Q M G T TY+TL+ + + + + L +++L +
Sbjct: 129 GNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNI 188
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK------Q 249
R F+ ++ + + EV MEE GVRPD T IA+ + + G+ + +
Sbjct: 189 RTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVE 248
Query: 250 KLVLKK 255
K+V+K+
Sbjct: 249 KMVMKE 254
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L K G+ V M KGQ + +Y+ +L + + L++++L +
Sbjct: 347 LCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI-AP 405
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD 247
F+ +I Y + M +K + +F +M + GV+PD T R + +A R+G+ D
Sbjct: 406 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMD 459
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L K G+ V M KGQ + +Y+ +L + + L++++L +
Sbjct: 334 LCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI-AP 392
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD 247
F+ +I Y + M +K + +F +M + GV+PD T R + +A R+G+ D
Sbjct: 393 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMD 446
>gi|218200769|gb|EEC83196.1| hypothetical protein OsI_28450 [Oryza sativa Indica Group]
Length = 669
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 133 ILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRS 192
++R L + A +L T++TL+ A+ + R +A +L++ + S
Sbjct: 251 LIRVHAGLLGRLSDALLLLRTAASVDASTFNTLITAYARAGRVTDARALFDEMPARNAVS 310
Query: 193 ISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLV 252
+S M++ Y + + +FA M+ GV PD+ + + +A ++G ++ K V
Sbjct: 311 -----WSAMVNGYVQAGDGREALGLFARMQADGVIPDDTVLVGVLAACAQLGVLEQGKWV 365
Query: 253 LKKYLSKWKYI 263
++ LSKW I
Sbjct: 366 HEEILSKWDEI 376
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L K G+ V M KGQ + +Y+ +L + + L++++L +
Sbjct: 337 LCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI-AP 395
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD 247
F+ +I Y + M +K + +F +M + GV+PD T R + +A R+G+ D
Sbjct: 396 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMD 449
>gi|255553939|ref|XP_002518010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542992|gb|EEF44528.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 824
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
+F+ M+ Y H M + + +F+DM +LG++PD + + SA G D+ LK +
Sbjct: 590 VFTAMVGGYAMHGMGEEALRIFSDMLDLGIKPDHIVITAVLSACCHAGLVDEG---LKIF 646
Query: 257 LSKWKYIHFKGERVRVRRDAWYES 280
S K I+ ++ RDA +S
Sbjct: 647 HSIEKGIN----EIQAGRDALSKS 666
>gi|357141422|ref|XP_003572219.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Brachypodium distachyon]
Length = 571
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 174 RADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTV 233
R + ES W++ + + R +S MI+ + +P +++FA+M+ +GV PD T+
Sbjct: 246 RCGDVESAWSVFHEMLDKDV--RTWSVMIAGLAVNGLPRDALKLFAEMKNIGVDPDSITM 303
Query: 234 RRIASAFQRVGQDDKQKLVL 253
+ SA G D+ K+ L
Sbjct: 304 TAVLSACSHAGMVDEGKMFL 323
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 161 TYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL--FSRMISLYDHHDMPNKIIEVF 218
+Y+TLL F ++RA+EA L +M+ Q RS L ++ +I+ + +K +F
Sbjct: 168 SYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLF 227
Query: 219 ADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSK 259
DM + G+ P+ T + + D+ + V ++ + K
Sbjct: 228 LDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDK 268
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEA-ESLWNMILHTQ 189
+ R+ + QV + M G T++TLL + K R EA E L M
Sbjct: 295 ISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGF 354
Query: 190 TRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD 247
+ SI ++ +IS Y + + +E+ M E G++PD T + S F++ G D+
Sbjct: 355 SPSIVT--YNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDE 410
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G R + MLSKG T TY +L+ + +R EA+ L+ IL Q S +
Sbjct: 362 GNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILD-QGVSPDVIM 420
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
F+ MI + + + + +M+ V PDE T + R G+ ++ +++L +
Sbjct: 421 FNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 478
>gi|449457361|ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Cucumis sativus]
Length = 858
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K GQ + ML +G T T++T++ + E L + Q
Sbjct: 328 KAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKEVTFLMQKMEELQCPP-DT 386
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAF 240
R ++ +ISLY HD + FA+MEE G++PD + R + A+
Sbjct: 387 RTYNILISLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTLLYAY 431
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 2/127 (1%)
Query: 133 ILRKRGQWLRVIQVAKWM-LSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTR 191
IL+++ W R +++ +W ++ + Y+ +L K + ESLW + +
Sbjct: 159 ILKEQTSWERALEIFEWFNMAGCYEVNVIHYNIVLGTLGKAQKWRLVESLWVEMNKKGIK 218
Query: 192 SISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKL 251
I+ + +I +Y + + M E G+ PDE T+ + +++ G+ K +
Sbjct: 219 PINST-YGTLIDVYSKGGFKEEALVWLERMNEQGMEPDEVTMGIVVQLYKKAGEFQKAES 277
Query: 252 VLKKYLS 258
KK+ S
Sbjct: 278 FFKKWSS 284
>gi|334187948|ref|NP_001190400.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332006093|gb|AED93476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 8/126 (6%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK-- 195
G +Q M G T TY+TL+ + + + + L +++L +
Sbjct: 129 GNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNI 188
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK------Q 249
R F+ ++ + + EV MEE GVRPD T IA+ + + G+ + +
Sbjct: 189 RTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVE 248
Query: 250 KLVLKK 255
K+V+K+
Sbjct: 249 KMVMKE 254
>gi|297801170|ref|XP_002868469.1| hypothetical protein ARALYDRAFT_330235 [Arabidopsis lyrata subsp.
lyrata]
gi|297314305|gb|EFH44728.1| hypothetical protein ARALYDRAFT_330235 [Arabidopsis lyrata subsp.
lyrata]
Length = 448
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 9/134 (6%)
Query: 128 AKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILH 187
K +RI R G W + + + + + G + Y++++ F K DEA +++
Sbjct: 145 GKIIRIYRDNGMWKKALGIVEEIKEIGLPMDVEIYNSIIDTFGKYGELDEA---LDVLEK 201
Query: 188 TQTRSISKRLFS---RMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
Q+ S SK S +I + HH + +E+F M++ G+ PD R + R+G
Sbjct: 202 MQSSSDSKPNISTWNSLIRWHCHHGALDMALELFTMMQDQGLYPDP---RMFVNLITRLG 258
Query: 245 QDDKQKLVLKKYLS 258
++ ++ K + S
Sbjct: 259 ENGNWNMIDKHFES 272
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 199 SRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
S MIS +D HDM + ++F M ++GV+P++ T +A R G
Sbjct: 332 SLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGD 378
>gi|449518091|ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g23020-like [Cucumis sativus]
Length = 859
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K GQ + ML +G T T++T++ + E L + Q
Sbjct: 329 KAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKEVTFLMQKMEELQCPP-DT 387
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAF 240
R ++ +ISLY HD + FA+MEE G++PD + R + A+
Sbjct: 388 RTYNILISLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTLLYAY 432
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 2/127 (1%)
Query: 133 ILRKRGQWLRVIQVAKWM-LSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTR 191
IL+++ W R +++ +W ++ + Y+ +L K + ESLW + +
Sbjct: 160 ILKEQTSWERALEIFEWFNMAGCYEVNVIHYNIVLGTLGKAQKWRLVESLWVEMNKKGIK 219
Query: 192 SISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKL 251
I+ + +I +Y + + M E G+ PDE T+ + +++ G+ K +
Sbjct: 220 PINST-YGTLIDVYSKGGFKEEALVWLERMNEQGMEPDEVTMGIVVQLYKKAGEFQKAES 278
Query: 252 VLKKYLS 258
KK+ S
Sbjct: 279 FFKKWSS 285
>gi|227202654|dbj|BAH56800.1| AT2G41720 [Arabidopsis thaliana]
Length = 815
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Query: 158 TMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEV 217
T Y ++L A+ K + EAES++N + ++ M+ Y+ + K E+
Sbjct: 564 TKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEP-DVIAYTSMLHAYNASEKWGKACEL 622
Query: 218 FADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKWKYIHFKG 267
+ME G+ PD + AF + GQ +++ L + K I F G
Sbjct: 623 LLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD--LMREKEIPFTG 670
>gi|224091939|ref|XP_002309408.1| predicted protein [Populus trichocarpa]
gi|222855384|gb|EEE92931.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 199 SRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLS 258
S +IS Y ++ PN+ +++F +M + V+PDE + + SA ++G D K V YLS
Sbjct: 268 SALISGYSRNEQPNEAVKIFFEMVSMNVKPDEFIMVSLMSACSQLGNSDLAKWV-DSYLS 326
Query: 259 K 259
+
Sbjct: 327 Q 327
>gi|297808179|ref|XP_002871973.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317810|gb|EFH48232.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 831
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 50/107 (46%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G + +++ + M G T T++TL+ + K + +E+ L M+L + + R
Sbjct: 403 GNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLEMMLRDEMLQPNDRT 462
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
+ ++ + + + + M+ GV+PD T +A A+ R+G
Sbjct: 463 CNILVQAWCNQRKIEEAWNIVYKMQSFGVKPDAVTFNTLARAYSRIG 509
>gi|255562697|ref|XP_002522354.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538432|gb|EEF40038.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 704
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 185 ILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
++ +Q + + ++ MI Y HH M + + +FA++ E G+ PD+ T + SA G
Sbjct: 470 LIFSQVCNPDLKCWNSMIGGYSHHGMAEEAVMLFAEVLECGLTPDQVTFLSLLSACNHSG 529
Query: 245 QDDKQKLVLKKYLSKWKYIHFKG 267
+K K + W Y+ G
Sbjct: 530 LVEKGKFL-------WDYMKKNG 545
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 123 PLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLW 182
PLIA L + G +++ + M +G T+ L+ F KD + DEA L+
Sbjct: 448 PLIAG------LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLF 501
Query: 183 NMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAF 240
+ ++ + ++ F+ MI Y K +++ M E+G++PD T R + S
Sbjct: 502 DKMIDSNVIP-NEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRS--I 193
+ G R +V + G TY L+ F K + + AE L + Q R I
Sbjct: 184 RAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEML---VTDMQVRGVGI 240
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
++ +F+ MI Y +M +K +E+ ME++G+ D T +A +R + D+ K +L
Sbjct: 241 NQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLL 300
Query: 254 KKYLSK 259
+ + K
Sbjct: 301 RIMIEK 306
>gi|357110688|ref|XP_003557148.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Brachypodium distachyon]
Length = 1038
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 36/209 (17%), Positives = 89/209 (42%), Gaps = 15/209 (7%)
Query: 53 PVSNSNANASKKNKLVVKVGKKEQ--HLWQKRDSAGSGQKALNLVRIVSELPNEKHAVY- 109
PV N+ +A + K GK + +L+ + G + A+ + +VS L KH +
Sbjct: 678 PVYNAMVDA------LCKCGKTAEAYNLFMEMADRGHSRDAVTISILVSHLT--KHGKFQ 729
Query: 110 ---GALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLL 166
++ + + + ++ + + G+ + + M+S G ++ T++ ++
Sbjct: 730 EAENIINGCFHGKVQLDTVVYNTFIKSMLESGKLYSAVSIHDRMISSGIPQSLQTFNIMI 789
Query: 167 LAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGV 226
+ + + D+A ++ R I ++ ++ M+S Y +F M+E G+
Sbjct: 790 SVYGQGGKLDKATEMFTAAQELGLR-IDEKTYTNMLSFYGKAGRHQDASVLFTRMKEEGI 848
Query: 227 RPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
P + + + + + G DK K + ++
Sbjct: 849 MPGKISFNSMVNVYATSGLHDKAKFIFEE 877
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 145 QVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISL 204
Q+ ++L G +++L+ + +EAE++++ T+ R + ++ MIS
Sbjct: 329 QIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFS---RTECRDLVS--WTAMISG 383
Query: 205 YDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASA 239
Y++ MP K +E + ME G+ PDE T+ + SA
Sbjct: 384 YENCLMPQKALETYKMMEAEGIMPDEITIAIVLSA 418
>gi|159465707|ref|XP_001691064.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
gi|158279750|gb|EDP05510.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
Length = 630
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K G+W R I V M +G + TY+TL++A + ++ EA +++ +L + + +
Sbjct: 150 KLGRWERAIHVLDLMKQEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLL-SDGYTPNS 208
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
++ +IS Y K +EV+ +M + T + SA ++ GQ
Sbjct: 209 TTYNALISAYGKTMQLGKALEVYQEMLRQNMERSVITYSSLISACEKAGQ 258
>gi|297737146|emb|CBI26347.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 133 ILRKRGQWLRVIQVAKWMLSKG-QGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTR 191
IL+++ W R +++ +W+ KG + Y+ +L K + ESLW+ ++ +R
Sbjct: 169 ILKEQSCWERALEIFEWLKKKGCYELNVIHYNIMLRILGKARKWHHVESLWDEMM---SR 225
Query: 192 SIS--KRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQ 249
I+ + +I +Y + + + M + G+ PDE T+ + +++ G+ K
Sbjct: 226 GITPVNSTYGTLIDVYSKGGLTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKA 285
Query: 250 KLVLK 254
+ K
Sbjct: 286 EQFFK 290
>gi|302790816|ref|XP_002977175.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
gi|300155151|gb|EFJ21784.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
Length = 806
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 177 EAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRI 236
EA +++ IL +S F+ MI+ Y H+ P + +E+F +M GV P+E T +
Sbjct: 406 EAREVFDSILENSKTVVS---FTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATV 462
Query: 237 ASAFQRVG 244
+A +G
Sbjct: 463 LAACVAIG 470
>gi|387193283|gb|AFJ68696.1| hypothetical protein NGATSA_2008400, partial [Nannochloropsis
gaditana CCMP526]
Length = 501
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 36/152 (23%)
Query: 129 KALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRAD------EAES-- 180
+A+ IL +R + R +Q+ + M +G A Y+ + A H A E ES
Sbjct: 59 QAIAILAERREGPRAVQLLREMQGRGFQARTAEYNHAMFACLDRHWATALELFHEVESGA 118
Query: 181 -------------------------LWNMILHT---QTRSISKRLFSRMISLYDHHDMPN 212
L + IL + Q +S LF+ ++ +Y
Sbjct: 119 VPGVRMDTGTTMAALGACRSGKKWQLASAILESARAQEVELSLVLFNAVLGVYAAAQQTG 178
Query: 213 KIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
K++E +M LGVRPDE T AF +VG
Sbjct: 179 KVLETLEEMRFLGVRPDEFTYNTAIGAFAKVG 210
>gi|242082435|ref|XP_002445986.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
gi|241942336|gb|EES15481.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
Length = 567
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 120 TEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAE 179
T ++ A AL +LR+ G+ I + K ML G + + L+ + K E+E
Sbjct: 272 TLIAVLTACSALALLRQ-GKSTHAIAI-KAMLESG----ISFSNALMTMYSKCGNVGESE 325
Query: 180 SLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASA 239
++ ++ +T+ I ++ +I+ Y H K+I +F +ME G+ PD+ T + SA
Sbjct: 326 LVF---INLRTKDIVS--WNTIIAAYAQHGKYQKVIALFHEMEMTGLIPDDITFLSVLSA 380
Query: 240 FQRVGQDDKQKLVLKKYLSKW 260
VG+ D + SK+
Sbjct: 381 CGHVGKVDASLKLFDLMSSKY 401
>gi|359477372|ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Vitis vinifera]
Length = 881
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 133 ILRKRGQWLRVIQVAKWMLSKG-QGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTR 191
IL+++ W R +++ +W+ KG + Y+ +L K + ESLW+ ++ +R
Sbjct: 169 ILKEQSCWERALEIFEWLKKKGCYELNVIHYNIMLRILGKARKWHHVESLWDEMM---SR 225
Query: 192 SIS--KRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQ 249
I+ + +I +Y + + + M + G+ PDE T+ + +++ G+ K
Sbjct: 226 GITPVNSTYGTLIDVYSKGGLTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKA 285
Query: 250 KLVLK 254
+ K
Sbjct: 286 EQFFK 290
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 142 RVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRM 201
R I+ M+S+G + TY+TLL A KD + D A + N L ++ S ++ +
Sbjct: 409 RAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ-LSSKGCSPVLITYNTV 467
Query: 202 ISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
I + I++ +M G++PD T + S R G+ D+
Sbjct: 468 IDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDE 514
>gi|403416583|emb|CCM03283.1| predicted protein [Fibroporia radiculosa]
Length = 740
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
FS ++ + MP++ +V ADM LG+ P T+ ++SAF RVG +K
Sbjct: 547 FSFFVNAFGKLHMPSRAAQVVADMCRLGIAPTVHTLTMLSSAFARVGDMEK 597
>gi|356544457|ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 711
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 153 KGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI--SKRLFSRMISLYDHHDM 210
KG + Y+TL+ A+ K +R +EAE L+ + +T+ I ++ F+ ++ Y
Sbjct: 368 KGVSSNAIVYNTLMDAYCKSNRVEEAEGLF---IEMKTKGIKHTEATFNILMYAYSRKMQ 424
Query: 211 PNKIIEVFADMEELGVRPDEDTVRRIASAF 240
P + ++ A+M++ G++P+ + + SA+
Sbjct: 425 PEIVEKLMAEMQDAGLKPNAKSYTCLISAY 454
>gi|168012346|ref|XP_001758863.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690000|gb|EDQ76369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 367
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 161 TYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFAD 220
T++TLL+ + R EA ++ IL + + ++ ++ +Y + IEVF +
Sbjct: 153 TFNTLLMMHVQGGRLKEAAEVYQRILDAGLKP-TVVTYTGLVQMYCRASKHKEAIEVFLE 211
Query: 221 MEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
M +G +PD + S + + G ++ LV ++
Sbjct: 212 MRRVGCKPDLMIYSLMISVYGKAGSAEEAALVFRQ 246
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 142 RVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRM 201
R I+ M+S+G + TY+TLL A KD + D A + N L ++ S ++ +
Sbjct: 352 RAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ-LSSKGCSPVLITYNTV 410
Query: 202 ISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
I + I++ +M G++PD T + S R G+ D+
Sbjct: 411 IDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDE 457
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 123 PLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLW 182
PLIA L + G +++ + M +G T+ L+ F KD + DEA L+
Sbjct: 448 PLIAG------LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLF 501
Query: 183 NMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAF 240
+ ++ + ++ F+ MI Y K +++ M E+G++PD T R + S
Sbjct: 502 DKMIDSNVIP-NEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558
>gi|356533844|ref|XP_003535468.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Glycine max]
Length = 813
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 133 ILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRS 192
IL+++ +W R +++ +W KG Y+ +L + + + ESLWN R
Sbjct: 125 ILKEQLRWDRALEIFEWFNKKGHELNTIHYNIMLRSLGRARQWRRVESLWN---EMNARG 181
Query: 193 ISKRL--FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQK 250
I+ + +I +Y + + M GV+PDE T+ + +++ G+ K +
Sbjct: 182 IAATCSTYGTLIDVYSKGGRRDDALSWLDMMLGQGVQPDEVTMVIVVQLYKKAGEFQKAE 241
Query: 251 LVLKK 255
KK
Sbjct: 242 EFFKK 246
>gi|3107905|dbj|BAA25906.1| leaf protein [Ipomoea nil]
Length = 665
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 1/126 (0%)
Query: 129 KALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHT 188
K ++ L +RG+ V + K + +G T+ TY T+L A R L +
Sbjct: 73 KLMKTLIERGKPQEVHSITKGLTEEGHRPTLVTYTTVLAALTLQKRFKSIPLLLKKVEQN 132
Query: 189 QTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
R S F+ MI+ + + +++F M E G +P T + F +G+ ++
Sbjct: 133 GLRPDSI-FFNPMINAFCESGNVKEAMKIFRKMREKGCKPTASTFNALIKGFGIIGKPEE 191
Query: 249 QKLVLK 254
+L+
Sbjct: 192 SSKLLE 197
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L K G+ V M KGQ + +Y +L + + L+N++L + +
Sbjct: 331 LCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLML-SDGIAP 389
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD 247
+F+ +I Y M ++ +F +M E GV PD T + +A R+G+ D
Sbjct: 390 DSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMD 443
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 15/94 (15%)
Query: 169 FDKDHRADEAESLWNMILHTQTR--------SISKRLFSR-------MISLYDHHDMPNK 213
+ ++H D A +L N ++ +R SI KR+ R MIS + H +
Sbjct: 296 YIEEHGYDGALNLCNSLITMYSRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGRE 355
Query: 214 IIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD 247
IE F M++LGV PD+ T+ + SA G D
Sbjct: 356 AIEAFEQMQQLGVSPDDQTLTGVLSACSHCGLVD 389
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 123 PLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLW 182
PLIA L + G +++ + M +G T+ L+ F KD + DEA L+
Sbjct: 471 PLIAG------LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLF 524
Query: 183 NMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAF 240
+ ++ + ++ F+ MI Y K +++ M E+G++PD T R + S
Sbjct: 525 DKMIDSNVIP-NEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 581
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K+GQ +Q+ + M S G+ + TY L+ + K ++ +EA + + +L+T + +
Sbjct: 445 KQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKP-TL 503
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDE 230
R +S +I Y P + E F M G RPD+
Sbjct: 504 RTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQ 538
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 161 TYDTLLLAFDKDHRADEAESLWN-MILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFA 219
TY+TL+ A + +EA ++++ M+ H + ++ MIS+Y + K ++F
Sbjct: 330 TYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWT--YNAMISVYGRCGLSGKAEQLFN 387
Query: 220 DMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
D+E G PD + AF R G +K K + ++
Sbjct: 388 DLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEE 423
>gi|89070699|ref|ZP_01157968.1| DNA polymerase I [Oceanicola granulosus HTCC2516]
gi|89043720|gb|EAR49924.1| DNA polymerase I [Oceanicola granulosus HTCC2516]
Length = 933
Score = 40.4 bits (93), Expect = 0.91, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 14/93 (15%)
Query: 154 GQGATMGTYDTLLLAFDKDHRADEAE---SLWNMILHTQTRSISKRLFSRMIS-LYDHHD 209
G G + T+D + + + A+EA+ LW +++ ++LF + ++ +Y+ +
Sbjct: 483 GTGKSARTFDRVPVEAVTPYAAEEADIVLRLW--------QALKQQLFRKQVTRVYETLE 534
Query: 210 MPNKIIEVFADMEELGVRPDEDTVRRIASAFQR 242
P +I V A ME G+R D DT+ R+++AF +
Sbjct: 535 RP--LIPVLAGMERAGIRVDRDTLSRMSNAFSQ 565
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G ++ Q+ ++ G G + + L+ + K + A ++N + + +
Sbjct: 462 GTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVIT----- 516
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
++ +IS + H K +E+F +M E+GV+P+E T + SA VG D+
Sbjct: 517 WTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDE 567
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 12/100 (12%)
Query: 168 AFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVR 227
+ K R D+A +++ QT ++ MIS Y D P + + VF +M G++
Sbjct: 290 GYSKAGRLDDARVIFD-----QTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIK 344
Query: 228 PDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKWKYIHFKG 267
PD T+ + SA +G DK K V +Y H G
Sbjct: 345 PDVVTMLSVISACVNLGTLDKAKWV-------HRYTHLNG 377
>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
Length = 698
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
++GQ ++ V + G TY L+ A+ + D E+L+ + R +
Sbjct: 329 RKGQLQQIDTVKTLLRDTGMSINKITYCLLIDAYARAGLMDRLEALYQEMRDCDIRP-NT 387
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
+++RMI++Y K +++ +M++ GV PD I + F R Q ++ ++ K
Sbjct: 388 YMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDAHVYNVIINTFGRTRQLEQARIAFFK 447
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRS--I 193
+ G R +V + G TY L+ F K + + AE L + Q R I
Sbjct: 260 RAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEML---VTDMQVRGVGI 316
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
++ +F+ MI Y +M +K +E+ ME++G+ D T +A +R + D+ K +L
Sbjct: 317 NQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLL 376
Query: 254 KKYLSK 259
+ + K
Sbjct: 377 RIMIEK 382
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 54/116 (46%), Gaps = 5/116 (4%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ + + G + V+ + M+ + MGTY+ L+ A K ++A+ + +LH
Sbjct: 395 IEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKI---LLHMDE 451
Query: 191 RSI--SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
+ I S + ++ +I Y + + +F M E+G +P +T + + F R G
Sbjct: 452 KGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGG 507
>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
Length = 770
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 199 SRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQK 250
+ MIS Y H P + I++F DM GVRP+E T + SA G +K +
Sbjct: 463 TSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAE 514
>gi|357484133|ref|XP_003612353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513688|gb|AES95311.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 68/160 (42%), Gaps = 11/160 (6%)
Query: 122 FPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESL 181
PL +A + + G+ L V + + G + +++ + K +E+E +
Sbjct: 557 LPLCISACSQLLTISEGKQLHV-----FAIKSGYSCDVYIGSSIIDMYAKCGNIEESEKV 611
Query: 182 WNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQ 241
++ L + F+ +IS Y HH + IEV + +E+ GV P+ T + SA
Sbjct: 612 FDEQLKPNEVT-----FNAIISGYAHHGKAQQAIEVLSKLEKNGVAPNHVTFLALMSACS 666
Query: 242 RVGQDDKQKLVLKKYLSKWKYIHFKGERVRVRRDAWYESG 281
G ++ + L K+K I K E DA+ +G
Sbjct: 667 HAGYVEETSHLFTLMLDKYK-IKPKSEHYSCLVDAYGRAG 705
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ + K Q + ++V M S G + TY L+ AF ++ ++AE ++ +
Sbjct: 287 INVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEE-MQQAG 345
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQK 250
++ ++ Y +P E+F+ M+ +G PD + + A+ R G + +
Sbjct: 346 HEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAE 405
Query: 251 LVLKK 255
V ++
Sbjct: 406 AVFEE 410
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 103 NEKHAVYGALDKWTAWETE--FPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMG 160
N+ ++Y AL + TE + L+ LR G R V M G
Sbjct: 192 NKAESIYMALLEAQCVPTEDTYALL-----LRAYCNAGSLHRAEGVISEMREHGIPPNAT 246
Query: 161 TYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFAD 220
Y+ L K ++A ++ + + R+ + F+ MI++Y P ++VF +
Sbjct: 247 VYNAYLDGLLKARCTEKAVEVYQRMKRERCRA-NTETFTLMINVYGKAKQPMSSMKVFNE 305
Query: 221 MEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
M+ +G +P+ T + +AF R G +K + V ++
Sbjct: 306 MKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEE 340
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRS--I 193
+ G R +V + G TY L+ F K + + AE L + Q R I
Sbjct: 260 RAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEML---VTDMQVRGVGI 316
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
++ +F+ MI Y +M +K +E+ ME++G+ D T +A +R + D+ K +L
Sbjct: 317 NQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLL 376
Query: 254 KKYLSK 259
+ + K
Sbjct: 377 RIMIEK 382
>gi|307103654|gb|EFN51912.1| hypothetical protein CHLNCDRAFT_59068 [Chlorella variabilis]
Length = 1025
Score = 40.4 bits (93), Expect = 0.98, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Query: 124 LIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWN 183
L+ + + K G W I+V + +G + TY+T+++A + +A EA ++
Sbjct: 265 LVTYNTLIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYE 324
Query: 184 MILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRV 243
+L + + ++ +IS Y + ++ +++F DM G + T + SA ++
Sbjct: 325 RMLAAGAQPTATT-YTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKA 383
Query: 244 GQ 245
G+
Sbjct: 384 GR 385
Score = 39.3 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K GQ R +Q+ + M+ +G + TY +L+ A +K R + A L+ +HT+ +
Sbjct: 347 KNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALELFRE-MHTEGCRPNV 405
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
++ +I+ K E+F M+ G +PD T + +A+ R G
Sbjct: 406 VTYNSLIAACAQGAQWEKAQEMFEQMQHRGCKPDAVTFGGLIAAYDRAGH 455
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L K G+ ++ ++M +KG + +Y LL + + R + +L++ + S
Sbjct: 347 LCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVS- 405
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
+ + +IS + M ++ + VF +M+ GVRP+ T + SAF R+G+
Sbjct: 406 NCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGR 457
>gi|242032435|ref|XP_002463612.1| hypothetical protein SORBIDRAFT_01g002930 [Sorghum bicolor]
gi|241917466|gb|EER90610.1| hypothetical protein SORBIDRAFT_01g002930 [Sorghum bicolor]
Length = 638
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G + V + M + G T TY LL + + R D L+ + +
Sbjct: 105 GATAEAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRELFREMRTAVPPDTAT-- 162
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYL 257
++ + +Y +++E+F DM E GV PD T + +A R G + + VL +Y+
Sbjct: 163 YNVLFRVYGDGGFFKEVVELFHDMLETGVEPDMVTCENVMAACGRGGLHEDAREVL-EYM 221
Query: 258 SK 259
++
Sbjct: 222 TR 223
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 69/147 (46%), Gaps = 7/147 (4%)
Query: 97 IVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQG 156
++S LP + A A + P + A A+R++ + G+ + A +L G
Sbjct: 97 LLSGLPGAELAAVAARELHGEGVLHHPRVLAT-AIRVMARAGR----LAEASALLDAAPG 151
Query: 157 ATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMP-NKII 215
G Y L+ AF + R +A +++ ++ + + + ++ ++ +Y +P +++
Sbjct: 152 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQP-AIVTYNVVLHVYSKMAVPWKEVV 210
Query: 216 EVFADMEELGVRPDEDTVRRIASAFQR 242
E+ A M+E GV PD T + S +R
Sbjct: 211 ELVASMKEHGVAPDRYTYNTLISCCRR 237
>gi|218194139|gb|EEC76566.1| hypothetical protein OsI_14394 [Oryza sativa Indica Group]
Length = 701
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 2/136 (1%)
Query: 122 FPL--IAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAE 179
FPL I AL+ LR QW + ++A ML+ G TY TL+ A + + D+A
Sbjct: 171 FPLDTIVFNVALKSLRAARQWPQAERLALDMLASGVPLDNITYSTLITAARRCRQFDKAV 230
Query: 180 SLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASA 239
+ + + + +S ++ +Y M +++ +F G +PD +A
Sbjct: 231 EWFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKM 290
Query: 240 FQRVGQDDKQKLVLKK 255
F G D + V K+
Sbjct: 291 FGEAGDYDGIQFVFKE 306
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L + G+W ++V M +KG + TY+TL+ K + DEA L +
Sbjct: 54 LGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVP- 112
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
R ++ +IS ++ +FA+M E G PD T + +VG+ K +L
Sbjct: 113 DVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELL 172
Query: 254 KK 255
++
Sbjct: 173 EE 174
>gi|297723955|ref|NP_001174341.1| Os05g0313900 [Oryza sativa Japonica Group]
gi|255676233|dbj|BAH93069.1| Os05g0313900 [Oryza sativa Japonica Group]
Length = 1070
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 161 TYDTLLLAFDKDHRADEAES-LWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFA 219
TY+ LL A K RAD+A++ L M+ S+ K + ++ Y + P+ +VF
Sbjct: 176 TYNCLLDALAKAGRADDAQARLREMVARCGDGSVDKYTLTSLLRCYCNAGRPDDANDVFQ 235
Query: 220 DMEELGVRPDEDTVRRIASAFQRVGQDD 247
M ELG DE + + AF + G+ D
Sbjct: 236 RMSELG-WVDEHVLTTLMVAFSKWGKVD 262
>gi|302841458|ref|XP_002952274.1| hypothetical protein VOLCADRAFT_42994 [Volvox carteri f.
nagariensis]
gi|300262539|gb|EFJ46745.1| hypothetical protein VOLCADRAFT_42994 [Volvox carteri f.
nagariensis]
Length = 225
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 161 TYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFAD 220
TY+TL++A + ++ EA ++N +L + + ++ +I++Y K++E F +
Sbjct: 59 TYNTLMIACNSSNQWHEALGVYNEML-ANGHTPNTTTYNALITVYTKAGQLEKVMETFRE 117
Query: 221 MEELGVRPDEDTVRRIASAFQRVGQ 245
ME G T + SA +R GQ
Sbjct: 118 MESAGCERTVITYSALISACERDGQ 142
>gi|295830921|gb|ADG39129.1| AT5G21222-like protein [Neslia paniculata]
Length = 166
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 51/107 (47%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G + +++ + M G T T++TL+ + K + +E+ L M+L + + R
Sbjct: 59 GNLDQAMKIFEQMKESGCKPTTSTFNTLIKGYGKLGKLEESSRLLEMMLRDEMLQPNDRT 118
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
+ ++ + + + ++ M+ GV+PD T +A A+ R+G
Sbjct: 119 CNILVQAWCNQRKVEEAWQIVYKMQSYGVKPDVVTFNTLARAYARIG 165
>gi|242035425|ref|XP_002465107.1| hypothetical protein SORBIDRAFT_01g032140 [Sorghum bicolor]
gi|241918961|gb|EER92105.1| hypothetical protein SORBIDRAFT_01g032140 [Sorghum bicolor]
Length = 805
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 161 TYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFAD 220
T ++L+ A+ K R D + L+ + H S ++ MIS Y H K++E+F
Sbjct: 589 TINSLITAYAKCGRLDLSVGLFLSLEHRDLDS-----WNSMISAYGMHGFYTKVLEMFKL 643
Query: 221 MEELGVRPDEDTVRRIASAFQRVG 244
MEE + PD T + SA G
Sbjct: 644 MEEGNINPDGLTFSSVLSACSHAG 667
>gi|19071826|dbj|BAB85657.1| PnC401 homologue [Arabidopsis thaliana]
Length = 831
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 51/107 (47%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G + +++ + M G T T++TL+ + K + +E+ L +M+L + + R
Sbjct: 403 GNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRT 462
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
+ ++ + + + + M+ GV+PD T +A A+ R+G
Sbjct: 463 CNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIG 509
>gi|358345906|ref|XP_003637015.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358347053|ref|XP_003637577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502950|gb|AES84153.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503512|gb|AES84715.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 823
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 133 ILRKRGQWLRVIQVAKWMLSKG-QGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTR 191
IL+++ W R + + +W KG + Y+ + K+ + ESLWN +
Sbjct: 115 ILKEQVCWKRALMIFEWFKKKGCYELNVIHYNIMFWILGKERKWRVLESLWNEMNENGVV 174
Query: 192 SISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKL 251
++ + +I +Y + + + M+ G+ PDE T+ + ++R G+ K
Sbjct: 175 PVNST-YGTLIDVYSKGGLIEEALAWLLRMQSEGMEPDEVTMGVVVQLYKRAGEFQKA-- 231
Query: 252 VLKKYLSKWKYIHFKGERVRVRRD 275
+++ +W +GE +R+ D
Sbjct: 232 --EEFFLRWS----RGEPLRIEID 249
>gi|42570531|ref|NP_850859.2| SNF1-like protein kinase [Arabidopsis thaliana]
gi|75160582|sp|Q8S9D1.1|PP395_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g21222; AltName: Full=SNF1-like protein kinase AtC401
gi|19071860|dbj|BAB85674.1| SNF1-like protein kinase [Arabidopsis thaliana]
gi|332005563|gb|AED92946.1| SNF1-like protein kinase [Arabidopsis thaliana]
Length = 831
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 51/107 (47%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G + +++ + M G T T++TL+ + K + +E+ L +M+L + + R
Sbjct: 403 GNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRT 462
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
+ ++ + + + + M+ GV+PD T +A A+ R+G
Sbjct: 463 CNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIG 509
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI--SK 195
G+ + + + + + S+G ++ TY+ L+ F R + M+ + R I SK
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGF---CRKGDTSGAAKMVKEMEERGIKPSK 408
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
++ +I + D K I++ MEELG+ PD T + F GQ ++ + K
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Query: 256 YLSK 259
+ K
Sbjct: 469 MVEK 472
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 128 AKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILH 187
A A+R++ + G+ + A +L G G Y L+ AF + R +A +++ ++
Sbjct: 145 ATAIRVMARAGR----LAEASALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVD 200
Query: 188 TQTRSISKRLFSRMISLYDHHDMP-NKIIEVFADMEELGVRPDEDTVRRIASAFQR 242
+ + + ++ ++ +Y +P +++E+ A M+E GV PD T + S +R
Sbjct: 201 SGVQP-AIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRR 255
>gi|29294052|gb|AAO73889.1| protein kinase family [Arabidopsis thaliana]
Length = 854
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 51/107 (47%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G + +++ + M G T T++TL+ + K + +E+ L +M+L + + R
Sbjct: 426 GNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRT 485
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
+ ++ + + + + M+ GV+PD T +A A+ R+G
Sbjct: 486 CNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIG 532
>gi|115444491|ref|NP_001046025.1| Os02g0170000 [Oryza sativa Japonica Group]
gi|49388067|dbj|BAD25179.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535556|dbj|BAF07939.1| Os02g0170000 [Oryza sativa Japonica Group]
Length = 397
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ + K Q + ++V M S G + TY L+ AF ++ ++AE ++ +
Sbjct: 89 INVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEE-MQQAG 147
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQK 250
++ ++ Y +P E+F+ M+ +G PD + + A+ R G + +
Sbjct: 148 HEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAE 207
Query: 251 LVLKK 255
V ++
Sbjct: 208 AVFEE 212
>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
Length = 933
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 75/186 (40%), Gaps = 30/186 (16%)
Query: 70 KVGKKEQH-----LWQKRDSAGSGQKALNLV-RIVSELPNEKHAVYGALDKWTAWETEFP 123
KVG H L AG G++ L+L+ +VS Y AL W
Sbjct: 302 KVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDW-------- 353
Query: 124 LIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWN 183
L K+G+ V ++ LS TY L+ A K H DEAE
Sbjct: 354 ----------LGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAE---Q 400
Query: 184 MILHTQTRSISKRL--FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQ 241
++L + +SIS + FS +I+ + + +K E M+E G+ P+ T + F
Sbjct: 401 VLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFF 460
Query: 242 RV-GQD 246
+ GQD
Sbjct: 461 KFQGQD 466
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 123 PLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLW 182
PLIA L + G +++ + M +G T+ L+ F KD + DEA L+
Sbjct: 448 PLIAG------LCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLF 501
Query: 183 NMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAF 240
+ ++ + ++ F+ MI Y K +++ M E+G++PD T R + S
Sbjct: 502 DKMIDSNVIP-NEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Query: 135 RKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEA-ESLWNMILHTQTRSI 193
R+ + +V + M + G TY+ LL + K R EA E L M SI
Sbjct: 302 RRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSI 361
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD 247
++ +IS Y + ++ +E+ + M + G++PD T + S F++ G+DD
Sbjct: 362 VT--YNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDD 413
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Query: 124 LIAAAKALRILRKRGQ-WLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLW 182
LI L + K G W ++ + M S G + TY+TL+ + + +EA ++
Sbjct: 255 LITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVF 314
Query: 183 NMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQR 242
+ S K ++ ++ +Y P + +EV +ME G P T + SA+ R
Sbjct: 315 EE-MKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYAR 373
Query: 243 VGQDDK 248
G D+
Sbjct: 374 DGLLDE 379
>gi|115445617|ref|NP_001046588.1| Os02g0290000 [Oryza sativa Japonica Group]
gi|47847947|dbj|BAD21737.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536119|dbj|BAF08502.1| Os02g0290000 [Oryza sativa Japonica Group]
Length = 930
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 164 TLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEE 223
LL A+ K A +L+ + LH +F+ MI Y H M K +E+F+ M
Sbjct: 677 ALLDAYSKCGNIANAYNLFQVSLHKDLV-----IFTAMIGAYAMHGMAEKAVELFSKMLT 731
Query: 224 LGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
L ++PD + + SA G D + K
Sbjct: 732 LDIKPDHVVLTALLSACSHAGLVDAGIKIFKS 763
>gi|242073178|ref|XP_002446525.1| hypothetical protein SORBIDRAFT_06g017520 [Sorghum bicolor]
gi|241937708|gb|EES10853.1| hypothetical protein SORBIDRAFT_06g017520 [Sorghum bicolor]
Length = 910
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
F+ MI Y H M K +E+F+ M +L +RPD + + SA G D + K
Sbjct: 688 FTAMIGCYAMHGMAEKAVELFSKMIKLDIRPDHVVLTTLLSACSHAGLVDAGIKIFKS 745
>gi|41393251|gb|AAS01974.1| putative chloroplastic RNA-binding protein, with alternative
splicing isoforms [Oryza sativa Japonica Group]
gi|108712189|gb|ABF99984.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 884
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 2/136 (1%)
Query: 122 FPL--IAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAE 179
FPL I AL+ LR QW + ++A ML+ G TY TL+ A + + D+A
Sbjct: 168 FPLDTIVFNVALKSLRAARQWPQAERLALDMLASGVPLDNITYSTLITAARRCRQFDKAV 227
Query: 180 SLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASA 239
+ + + + +S ++ +Y M +++ +F G +PD +A
Sbjct: 228 EWFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKM 287
Query: 240 FQRVGQDDKQKLVLKK 255
F G D + V K+
Sbjct: 288 FGEAGDYDGIQFVFKE 303
>gi|356574710|ref|XP_003555488.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Glycine max]
Length = 821
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Query: 133 ILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRS 192
IL+++ +W R +++ +W KG + Y+ +L + + + ESLWN ++ + +
Sbjct: 121 ILKEQLRWDRALEIFEWFNKKGHELNVIHYNIMLRSLGRARQWRRVESLWNE-MNARGIA 179
Query: 193 ISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLV 252
+ + +I +Y + + M GV+PDE T+ + +++ G+ K +
Sbjct: 180 ATCSTYGTLIDVYSKGGRRDDALSWLNMMLGQGVQPDEVTMVIVVQLYKKAGEFQKGEEF 239
Query: 253 LKKYLS 258
+K+ S
Sbjct: 240 FRKWSS 245
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%)
Query: 121 EFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAES 180
E +I LR L + QW RV + M ++G AT TY TL+ + K R D+A S
Sbjct: 144 ELNVIHYNIMLRSLGRARQWRRVESLWNEMNARGIAATCSTYGTLIDVYSKGGRRDDALS 203
Query: 181 LWNMIL 186
NM+L
Sbjct: 204 WLNMML 209
>gi|218190515|gb|EEC72942.1| hypothetical protein OsI_06806 [Oryza sativa Indica Group]
Length = 1030
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Query: 164 TLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEE 223
LL A+ K A +L+ + LH +F+ MI Y H M K +E+F+ M
Sbjct: 677 ALLDAYSKCGNIANAYNLFQVSLHKDLV-----IFTAMIGAYAMHGMAEKAVELFSKMLT 731
Query: 224 LGVRPDEDTVRRIASAFQRVGQDDKQKLVLK 254
L ++PD + + SA G D + K
Sbjct: 732 LDIKPDHVVLTALLSACSHAGLVDAGIKIFK 762
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Query: 135 RKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEA-ESLWNMILHTQTRSI 193
R+ + +V + M + G TY+ LL + K R EA E L M SI
Sbjct: 302 RRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSI 361
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD 247
++ +IS Y + ++ +E+ + M + G++PD T + S F++ G+DD
Sbjct: 362 VT--YNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDD 413
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Query: 124 LIAAAKALRILRKRGQ-WLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLW 182
LI L + K G W ++ + M S G + TY+TL+ + + +EA ++
Sbjct: 255 LITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVF 314
Query: 183 NMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQR 242
+ S K ++ ++ +Y P + +EV +ME G P T + SA+ R
Sbjct: 315 EE-MKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYAR 373
Query: 243 VGQDDK 248
G D+
Sbjct: 374 DGLLDE 379
>gi|115456691|ref|NP_001051946.1| Os03g0856100 [Oryza sativa Japonica Group]
gi|41393252|gb|AAS01975.1| putative chloroplastic RNA-binding protein, with alternative
splicing isoforms [Oryza sativa Japonica Group]
gi|113550417|dbj|BAF13860.1| Os03g0856100 [Oryza sativa Japonica Group]
gi|222626198|gb|EEE60330.1| hypothetical protein OsJ_13428 [Oryza sativa Japonica Group]
Length = 640
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 2/136 (1%)
Query: 122 FPL--IAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAE 179
FPL I AL+ LR QW + ++A ML+ G TY TL+ A + + D+A
Sbjct: 108 FPLDTIVFNVALKSLRAARQWPQAERLALDMLASGVPLDNITYSTLITAARRCRQFDKAV 167
Query: 180 SLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASA 239
+ + + + +S ++ +Y M +++ +F G +PD +A
Sbjct: 168 EWFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKM 227
Query: 240 FQRVGQDDKQKLVLKK 255
F G D + V K+
Sbjct: 228 FGEAGDYDGIQFVFKE 243
>gi|413925171|gb|AFW65103.1| hypothetical protein ZEAMMB73_773985 [Zea mays]
Length = 567
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 11/141 (7%)
Query: 120 TEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAE 179
T ++ A AL +LR+ G+ I + K ML G + + L+ + K E+E
Sbjct: 272 TLIAVLTACSALALLRQ-GKSTHAIAI-KAMLESG----ISFSNALMTMYSKCGNVGESE 325
Query: 180 SLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASA 239
++ ++ +T+ I ++ +I+ Y H K+I +F +ME G+ PD+ T + SA
Sbjct: 326 LVF---INLRTKDIVS--WNTIIAAYAQHGKYQKVIALFHEMEVTGLIPDDITFLSVLSA 380
Query: 240 FQRVGQDDKQKLVLKKYLSKW 260
VG D + SK+
Sbjct: 381 CGHVGMVDASLKLFDLMSSKY 401
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 128 AKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILH 187
A A+R++ + G+ + A +L G G Y L+ AF + R +A +++ ++
Sbjct: 145 ATAIRVMARAGR----LAEASALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVD 200
Query: 188 TQTRSISKRLFSRMISLYDHHDMP-NKIIEVFADMEELGVRPDEDTVRRIASAFQR 242
+ + + ++ ++ +Y +P +++E+ A M+E GV PD T + S +R
Sbjct: 201 SGVQP-AIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRR 255
>gi|357140426|ref|XP_003571769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Brachypodium distachyon]
Length = 637
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 5/127 (3%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
L +L G+ L I + M KG +G Y+ + A K + +L++ + +
Sbjct: 400 LEVLCNSGKTLEAIDLLHMMPEKGIDTDIGMYNMVFSALGKLKQVSFISTLFDKM---KA 456
Query: 191 RSISKRLFSR--MISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
I+ LF+ MIS Y + +K +F +ME +PD T + + + G D+
Sbjct: 457 SGIAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDE 516
Query: 249 QKLVLKK 255
++ K+
Sbjct: 517 AHILFKE 523
>gi|115436130|ref|NP_001042823.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|57899055|dbj|BAD87829.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532354|dbj|BAF04737.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|222618277|gb|EEE54409.1| hypothetical protein OsJ_01440 [Oryza sativa Japonica Group]
Length = 484
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 9/171 (5%)
Query: 81 KRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAA--AKALRILRKRG 138
K+D G++ L L E +V LD+W E + AA AK R L K
Sbjct: 40 KKDKRPLGRRLLELGDAAGE-----GSVSRVLDEWVREGREEAIAAADLAKCARDLHKVK 94
Query: 139 QWLRVIQVAKWML-SKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
+ +++ WM+ +KG T Y L + + AE ++ I + TR + R
Sbjct: 95 RDAHALELMDWMVNTKGMSMTYARYALHLELLYSVYGIEAAEEYFSGI-PSFTRDQNHRT 153
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+ +++ Y M K ++ M+ELG+ + + + +GQ K
Sbjct: 154 YGALLNCYCSAKMEEKATNIYRRMDELGIPSSTKLMNNLMGLYLELGQHSK 204
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ + K Q + ++V M S G + TY L+ AF ++ ++AE ++ +
Sbjct: 430 INVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEE-MQQAG 488
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQK 250
++ ++ Y +P E+F+ M+ +G PD + + A+ R G + +
Sbjct: 489 HEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAE 548
Query: 251 LVLKK 255
V ++
Sbjct: 549 AVFEE 553
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 4/153 (2%)
Query: 103 NEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTY 162
N+ ++Y AL + TE A LR G R V M G Y
Sbjct: 335 NKAESIYMALLEAQCVPTE---DTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVY 391
Query: 163 DTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADME 222
+ L K ++A ++ + + R+ + F+ MI++Y P ++VF +M+
Sbjct: 392 NAYLDGLLKARCTEKAVEVYQRMKRERCRA-NTETFTLMINVYGKAKQPMSSMKVFNEMK 450
Query: 223 ELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
+G +P+ T + +AF R G +K + V ++
Sbjct: 451 SIGCKPNICTYTALVNAFAREGLCEKAEEVFEE 483
>gi|452824913|gb|EME31913.1| mitochondrial protein translocase, MPT family isoform 2 [Galdieria
sulphuraria]
Length = 465
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 150 MLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL--FSRMISLYDH 207
M S G TY+TL+ A+ R D AE+ + QT +L F+ +++ Y
Sbjct: 272 MESDGIEPDRVTYNTLIKAYGYMRRHDLAEAAFKQ----QTSKFGPQLVGFNTLMNGYCE 327
Query: 208 HDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
++++E+FA ++ELG++PD T I +VGQ
Sbjct: 328 DKKFSRVLELFAQLKELGLKPDVKTYSTII----KVGQ 361
>gi|222622633|gb|EEE56765.1| hypothetical protein OsJ_06312 [Oryza sativa Japonica Group]
Length = 836
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Query: 165 LLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEEL 224
LL A+ K A +L+ + LH +F+ MI Y H M K +E+F+ M L
Sbjct: 543 LLDAYSKCGNIANAYNLFQVSLHKDLV-----IFTAMIGAYAMHGMAEKAVELFSKMLTL 597
Query: 225 GVRPDEDTVRRIASAFQRVGQDDKQKLVLK 254
++PD + + SA G D + K
Sbjct: 598 DIKPDHVVLTALLSACSHAGLVDAGIKIFK 627
>gi|222631078|gb|EEE63210.1| hypothetical protein OsJ_18020 [Oryza sativa Japonica Group]
Length = 975
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 161 TYDTLLLAFDKDHRADEAES-LWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFA 219
TY+ LL A K RAD+A++ L M+ S+ K + ++ Y + P+ +VF
Sbjct: 176 TYNCLLDALAKAGRADDAQARLREMVARCGDGSVDKYTLTSLLRCYCNAGRPDDANDVFQ 235
Query: 220 DMEELGVRPDEDTVRRIASAFQRVGQDD 247
M ELG DE + + AF + G+ D
Sbjct: 236 RMSELG-WVDEHVLTTLMVAFSKWGKVD 262
>gi|218188053|gb|EEC70480.1| hypothetical protein OsI_01546 [Oryza sativa Indica Group]
Length = 484
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 9/171 (5%)
Query: 81 KRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAA--AKALRILRKRG 138
K+D G++ L L E +V LD+W E + AA AK R L K
Sbjct: 40 KKDKRPLGRRLLELGDAAGE-----GSVSRVLDEWVREGREEAIAAADLAKCARDLHKVK 94
Query: 139 QWLRVIQVAKWML-SKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
+ +++ WM+ +KG T Y L + + AE ++ I + TR + R
Sbjct: 95 RDAHALELMDWMVNTKGMSMTYARYALHLELLYSVYGIEAAEEYFSGI-PSFTRDQNHRT 153
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+ +++ Y M K ++ M+ELG+ + + + +GQ K
Sbjct: 154 YGALLNCYCSAKMEEKATNIYRRMDELGIPSSTKLMNNLMGLYLELGQHSK 204
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 6/156 (3%)
Query: 105 KHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDT 164
K A+ G L K + E ++ + + L K G+ ++ M +G + TY T
Sbjct: 261 KEAI-GTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRT 319
Query: 165 LLLAFDKDHRADEAESLWNMILHTQTRS--ISKRLFSRMISLYDHHDMPNKIIEVFADME 222
LL K+ R E+E L+++++ + I+ L D K++ A M
Sbjct: 320 LLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLL---ASMV 376
Query: 223 ELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLS 258
+GV+PD T + + + RV + D + K+ +S
Sbjct: 377 SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVS 412
>gi|293336578|ref|NP_001168380.1| uncharacterized protein LOC100382149 [Zea mays]
gi|223947871|gb|ACN28019.1| unknown [Zea mays]
gi|413955892|gb|AFW88541.1| hypothetical protein ZEAMMB73_254585 [Zea mays]
Length = 651
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 64/119 (53%), Gaps = 6/119 (5%)
Query: 144 IQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMIS 203
+ A+ + G+ ++++++ + K+ R ++A++L++++ S +S MI+
Sbjct: 320 VVAARRLFDNGESLDHFSWNSMISGYLKNGRVEDAKALFDVMPDKDNVS-----WSAMIA 374
Query: 204 LYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKWKY 262
H++ ++ + VF M ++PD+ T+ + SA + ++ KLV +Y+ K++Y
Sbjct: 375 GCVHNNQSSEALNVFDSMRAHEIKPDDVTLVSVISACSNLSALEQGKLV-HEYIRKYQY 432
>gi|218196531|gb|EEC78958.1| hypothetical protein OsI_19424 [Oryza sativa Indica Group]
Length = 975
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 161 TYDTLLLAFDKDHRADEAES-LWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFA 219
TY+ LL A K RAD+A++ L M+ S+ K + ++ Y + P+ +VF
Sbjct: 176 TYNCLLDALAKAGRADDAQARLREMVARCGDGSVDKYTLTSLLRCYCNAGRPDDANDVFQ 235
Query: 220 DMEELGVRPDEDTVRRIASAFQRVGQDD 247
M ELG DE + + AF + G+ D
Sbjct: 236 RMSELG-WVDEHVLTTLMVAFSKWGKVD 262
>gi|255551665|ref|XP_002516878.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543966|gb|EEF45492.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 714
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 143 VIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMI 202
+IQV M KG + Y+TL+ A++K ++ +E E ++ + + S F+ ++
Sbjct: 354 IIQVE--MAKKGAFSNAIVYNTLMDAYNKSNQIEEVEGIFAEMKAKGLKPTSAT-FNILM 410
Query: 203 SLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQR 242
Y P + E+ +M++ G++PD + + SA+ R
Sbjct: 411 DAYSRRMQPEIVEELLLEMQDAGLQPDAKSYTCLISAYGR 450
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 75/186 (40%), Gaps = 30/186 (16%)
Query: 70 KVGKKEQH-----LWQKRDSAGSGQKALNLV-RIVSELPNEKHAVYGALDKWTAWETEFP 123
KVG H L AG G++ L+L+ +VS Y AL W
Sbjct: 302 KVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDW-------- 353
Query: 124 LIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWN 183
L K+G+ V ++ LS TY L+ A K H DEAE
Sbjct: 354 ----------LGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAE---Q 400
Query: 184 MILHTQTRSISKRL--FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQ 241
++L + +SIS + FS +I+ + + +K E M+E G+ P+ T + F
Sbjct: 401 VLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFF 460
Query: 242 RV-GQD 246
+ GQD
Sbjct: 461 KFQGQD 466
>gi|224089803|ref|XP_002308816.1| predicted protein [Populus trichocarpa]
gi|222854792|gb|EEE92339.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 161 TYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFAD 220
Y+ L F K D+AE L++ +L + FS +IS ++ +K +E F
Sbjct: 178 VYNVTLKVFRKGRDLDKAEKLFDEMLERGVKP-DNFTFSTIISCARLCNLADKAVEWFEK 236
Query: 221 MEELGVRPDEDTVRRIASAFQRVGQDDK 248
M G+ PD+ T+ + ++ R G +K
Sbjct: 237 MPSFGLEPDDVTLSTMIDSYGRAGNVEK 264
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 9/171 (5%)
Query: 77 HLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEF---PLIAAAKALRI 133
+L K ++A + I+ L +H V AL+ + ET+ ++ + +
Sbjct: 171 NLLNKMEAAKIEADVVIFNTIIDSLCKYRH-VDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L G+W Q+ M+ K + T++ L+ AF K+ + EAE L + ++ RSI
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK---RSI 286
Query: 194 SKRLFS--RMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQR 242
+F+ +I+ + HD +K ++F M PD DT + F +
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
>gi|296086986|emb|CBI33242.3| unnamed protein product [Vitis vinifera]
Length = 335
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 69/163 (42%), Gaps = 4/163 (2%)
Query: 92 LNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWML 151
++L +S L + +V LD W + + + + LRKR ++ + +++++WM
Sbjct: 39 ISLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEWMS 98
Query: 152 SKGQGATMGTYDTLLLAFDKDHRAD-EAESLWNMILHTQTRSISKRLFSRMISLYDHHDM 210
KG A T + L R AES +N + Q + + + +++ Y
Sbjct: 99 KKGICAFSPTEHAVQLDLIGRVRGFLSAESYFNSL---QNHDKTDKTYGALLNCYVRQRQ 155
Query: 211 PNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
+K + M+E+G T I + VGQ +K VL
Sbjct: 156 TDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVL 198
>gi|388510802|gb|AFK43467.1| unknown [Lotus japonicus]
Length = 259
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 154 GQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNK 213
G A + Y ++L ++ EAE L++ ++ + R+F+ MI +Y K
Sbjct: 131 GFDALLPLYSDMILLLGRNKMVGEAEELFSQVVEKGLKP-DTRMFTEMIGVYLQGGNTEK 189
Query: 214 IIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD 247
+E++ M+ G PD+ T + + ++ G+ +
Sbjct: 190 AMELYRSMKASGCSPDKLTFTILIRSLEKSGEQE 223
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 75/186 (40%), Gaps = 30/186 (16%)
Query: 70 KVGKKEQH-----LWQKRDSAGSGQKALNLV-RIVSELPNEKHAVYGALDKWTAWETEFP 123
KVG H L AG G++ L+L+ +VS Y AL W
Sbjct: 302 KVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDW-------- 353
Query: 124 LIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWN 183
L K+G+ V ++ LS TY L+ A K H DEAE
Sbjct: 354 ----------LGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAE---Q 400
Query: 184 MILHTQTRSISKRL--FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQ 241
++L + +SIS + FS +I+ + + +K E M+E G+ P+ T + F
Sbjct: 401 VLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFF 460
Query: 242 RV-GQD 246
+ GQD
Sbjct: 461 KFQGQD 466
>gi|9755888|emb|CAC01941.1| RSP67.2 [Raphanus sativus]
Length = 700
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 162 YDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADM 221
Y+ + F K +++E L++ +L + F+ +IS +PN+ +E F M
Sbjct: 176 YNVTMKVFRKSKDLEKSEKLFDEMLQRGVKP-DNATFTTLISCARQCGLPNRAVEWFEKM 234
Query: 222 EELGVRPDEDTVRRIASAFQRVG 244
G+ PD T+ + A+ R G
Sbjct: 235 PSFGLEPDNVTLAAMIDAYGRAG 257
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 161 TYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFAD 220
TY+++L AF +D R +E E + M+ + S + ++ MI +Y M K E++
Sbjct: 257 TYNSVLHAFARDGRIEEVERIRGMMRDARCSS-DEITYNTMIHMYGKAGMHRKAEELYVQ 315
Query: 221 MEELGVRPDEDTVRRIASAFQRVG 244
M+E G PD T + + G
Sbjct: 316 MKEEGRCPDSVTFTVLIDTLGKAG 339
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLW-NMILHTQ 189
+ + K G + + V K M G T++TL++ + ++ EA++L MI
Sbjct: 817 ISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGN 876
Query: 190 TRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQ 249
+IS ++ +IS Y VF + E G +PD + + +++ G+ K
Sbjct: 877 APNIST--YTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKI 934
Query: 250 KLVLKK 255
+ V+++
Sbjct: 935 EEVIEQ 940
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 161 TYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFAD 220
TY+++L AF +D R +E E + M+ + S + ++ MI +Y M K E++
Sbjct: 268 TYNSVLHAFARDGRIEEVERIRGMMRDARCSS-DEITYNTMIHMYGKAGMHRKAEELYVQ 326
Query: 221 MEELGVRPDEDTVRRIASAFQRVG 244
M+E G PD T + + G
Sbjct: 327 MKEEGRCPDSVTFTVLIDTLGKAG 350
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 144 IQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMIS 203
I VA+ + + + ++++++ + K + D A+++++ + S +S MIS
Sbjct: 427 IMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVS-----WSSMIS 481
Query: 204 LYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLV 252
Y +D+ ++ + +F +M+ G +PDE T+ + SA R+ ++ K V
Sbjct: 482 GYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWV 530
>gi|297790207|ref|XP_002863007.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297308804|gb|EFH39266.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 842
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 49/124 (39%), Gaps = 9/124 (7%)
Query: 132 RILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTR 191
+L K W R + VA M S+G A + A+ + EAE ++ R
Sbjct: 451 EMLEKSWSWFRRVHVAGNMSSEGYSANID-------AYGERGYLSEAERVFICCQEVNKR 503
Query: 192 SISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKL 251
++ + ++ MI Y K E+F M GV PD+ T + DK K
Sbjct: 504 TVLE--YNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKC 561
Query: 252 VLKK 255
L+K
Sbjct: 562 YLEK 565
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/147 (19%), Positives = 68/147 (46%), Gaps = 4/147 (2%)
Query: 103 NEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTY 162
+E A+Y L + + ET++P + + + L +R + + + + A T+
Sbjct: 662 DEAEAIYRKLLR-SCNETQYPDVYTSHCMNNLCSERSMVRKAEAIFESMKQRREANEFTF 720
Query: 163 DTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL-FSRMISLYDHHDMPNKIIEVFADM 221
+L + K+ R +EA + + + R ++ L ++ ++ LY + +E F +M
Sbjct: 721 AMMLCMYKKNGRFEEATQIAKQM--REMRILTDPLSYNSVLGLYALDGRFKEAVETFKEM 778
Query: 222 EELGVRPDEDTVRRIASAFQRVGQDDK 248
G++PD+ T + + + ++G K
Sbjct: 779 VSSGIQPDDSTFKSLGTILIKLGMSKK 805
>gi|116789832|gb|ABK25404.1| unknown [Picea sitchensis]
Length = 278
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 150 MLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHD 209
M + G ++ TY+T++ + K A ++N L S+ ++ +S MIS Y
Sbjct: 1 MKAAGIVPSLQTYNTMISVYGKARELQNAVQIFNS-LQKSGLSVDEKTYSNMISCYGKAG 59
Query: 210 MPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
++F+ M++ G++P + T + A+ R G
Sbjct: 60 FFQDAAKLFSRMQQEGIKPGKVTYNTMLDAYARSG 94
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 146 VAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISL- 204
+ K M G + +Y+TLL F + RA+EA L +M+ +Q RS + S I +
Sbjct: 152 LVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVIN 211
Query: 205 -YDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSK 259
+ +K +F +M + G++P+ T + + D+ + V ++ + K
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK 267
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 154 GQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNK 213
G + +++ L+ + ++ D A L+N + S +S MIS Y ++ PN
Sbjct: 391 GSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVFS-----WSTMISGYTQNEQPNL 445
Query: 214 IIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
+E+F M G++P+E T+ + SA G
Sbjct: 446 ALELFHKMVASGIKPNEVTMVSVLSAIATSG 476
>gi|391348513|ref|XP_003748491.1| PREDICTED: protein PTCD3 homolog, mitochondrial-like [Metaseiulus
occidentalis]
Length = 652
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 8/133 (6%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
+R QW +V VA+ + + + Y L+ K D L+ +L T+ ++
Sbjct: 200 RRNQW-KVGGVAEKIFEEIENKDGEAYSALIRGMLKHGNVDRGYKLFEEML-TKNLVPTR 257
Query: 196 RLFSRMIS-----LYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQK 250
+F+ +I H ++E+ MEE GVRPD T SA R+G D+ K
Sbjct: 258 HVFNHLIRWVPLLKESHQSRLAFLMELLNRMEECGVRPDLITFNSALSACSRLGHTDRSK 317
Query: 251 LVLKKYLSKWKYI 263
+V + L++ +++
Sbjct: 318 IV-PELLAEMRFL 329
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 3/136 (2%)
Query: 121 EFPLIAAAKALRILRKRGQ-WLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAE 179
E LI L + K G W ++I + + M G + TY+TL+ +EA
Sbjct: 211 EPTLITYNAILNVYGKMGMPWAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEAL 270
Query: 180 SLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASA 239
L+ I R ++ ++ +Y P + +EV ME RP T + SA
Sbjct: 271 DLFEEIKVAGFRP-DAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSA 329
Query: 240 FQRVGQDDKQKLVLKK 255
+ R G + LVLK+
Sbjct: 330 YVRGGLLE-DALVLKR 344
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 201 MISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ-DDKQKLVLK 254
MIS Y PN+ I +F +M+ G++PD TV + +A+ R G+ DD + L +K
Sbjct: 227 MISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIK 281
>gi|297830924|ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329184|gb|EFH59603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 824
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 186 LHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
+ +QT+ + ++ MI Y H M + I +F M+ELG++PD + SA G
Sbjct: 582 MFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQELGIKPDAIAFVAVLSACSYSGL 641
Query: 246 DDK 248
D+
Sbjct: 642 VDE 644
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 9/171 (5%)
Query: 77 HLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEF---PLIAAAKALRI 133
+L K ++A + I+ L +H V AL+ + ET+ ++ + +
Sbjct: 170 NLLNKMEAAKIEADVVIFNTIIDSLCKYRH-VDDALNLFKEMETKGIRPNVVTYSSLISC 228
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L G+W Q+ M+ K + T++ L+ AF K+ + EAE L + ++ RSI
Sbjct: 229 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK---RSI 285
Query: 194 SKRLFS--RMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQR 242
+F+ +I+ + HD +K ++F M PD DT + F +
Sbjct: 286 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 336
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 13/87 (14%)
Query: 175 ADEAESLWNMILHTQTRSISKRLF-------------SRMISLYDHHDMPNKIIEVFADM 221
AD +L NM +++++F + MI+ Y HH +K I +F +M
Sbjct: 386 ADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEM 445
Query: 222 EELGVRPDEDTVRRIASAFQRVGQDDK 248
+ LG RPD T + SA G D+
Sbjct: 446 QALGFRPDNVTYIALLSACSHAGLVDE 472
>gi|449465220|ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Cucumis sativus]
Length = 874
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 163 DTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADME 222
+ +++ F K+ D+A +++M+ S +S MIS Y +++P+ +++F M
Sbjct: 566 NVMIVGFTKNGMIDQARQIFDMMPEKDVFS-----WSTMISGYAQNELPDVALDLFHGMI 620
Query: 223 ELGVRPDEDTVRRIASAFQRVGQ 245
+ V P+E T+ + SA +G+
Sbjct: 621 DSKVEPNEITMVSVFSAIAALGK 643
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 13/87 (14%)
Query: 175 ADEAESLWNMILHTQTRSISKRLF-------------SRMISLYDHHDMPNKIIEVFADM 221
AD +L NM +++++F + MI+ Y HH +K I +F +M
Sbjct: 386 ADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEM 445
Query: 222 EELGVRPDEDTVRRIASAFQRVGQDDK 248
+ LG RPD T + SA G D+
Sbjct: 446 QALGFRPDNVTYIALLSACSHAGLVDE 472
>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 161 TYDTLLLAFDKDHRADEAESLWNMILHTQ-TRSISKRLFSRMISLYDHHDMPNKIIEVFA 219
TY TL++ F ++ + ++A +W+ + + T ++S F+ +I HH +E F
Sbjct: 488 TYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVST--FNSLIGGLCHHGKTELAMEKFD 545
Query: 220 DMEELGVRPDEDTVRRIASAFQRVGQDDK 248
++ E G+ PD+ T I + + G+ +K
Sbjct: 546 ELAESGLLPDDSTFNSIILGYCKEGRVEK 574
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ + K+G + I++ K ML G + +Y T++ K + +EA L N++++ +
Sbjct: 465 INFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMIN-KG 523
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQR 242
+ + ++S M S +KII++F +++ VR D + S+ +
Sbjct: 524 ITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCK 575
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 6/147 (4%)
Query: 124 LIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWN 183
LI+ + + L K G+ +++ M++KG Y ++ A ++ R D+ +++
Sbjct: 493 LISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFD 552
Query: 184 MILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDT----VRRIAS- 238
I RS L++ +IS ++ I+ FA M G P+E T +R +AS
Sbjct: 553 SIQDATVRS-DAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASE 611
Query: 239 AFQRVGQDDKQKLVLKKYLSKWKYIHF 265
R QD +L ++ + K HF
Sbjct: 612 GLVREAQDLLSELCSRRAVRKHLVRHF 638
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 64/151 (42%), Gaps = 5/151 (3%)
Query: 111 ALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFD 170
+D+ ++ LI + G+ + + + + + S+G ++ TY+ L+ F
Sbjct: 325 VMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGF- 383
Query: 171 KDHRADEAESLWNMILHTQTRSI--SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRP 228
R + M+ + R I SK ++ +I + D I++ + MEELG+ P
Sbjct: 384 --CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVP 441
Query: 229 DEDTVRRIASAFQRVGQDDKQKLVLKKYLSK 259
D T + F GQ ++ + K + K
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKSMVEK 472
>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
Group]
gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
Length = 618
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 16/167 (9%)
Query: 101 LPNEKHAVYGALDKWTAWETEFPLIAAAKA-LRILRKRGQWLRVIQVAKWMLSKGQGATM 159
LP+E +V+G L E P + A A L L K RV ++ ML +G ++
Sbjct: 121 LPDEALSVFGRL-------RELPALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSV 173
Query: 160 GTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL--FSRMISLYDHHDMPNKIIEV 217
TY+TL+ A H+ D A++ W + R I + ++ MI D +
Sbjct: 174 VTYNTLINAC--RHQGDVAKA-WEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGL 230
Query: 218 FADMEELGVRPDEDTVRRIASA-FQRVGQDDKQKLVLKKYLSKWKYI 263
F +M+E G+RP+ T + S+ F+R + K LV L K +
Sbjct: 231 FLEMKEAGMRPNLYTYNALMSSHFKR--DNIKHALVFYYDLLKCGLV 275
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
Query: 161 TYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKR----LFSRMISLYDHHDMPNKIIE 216
Y +++ A+ K + EAES++ T+ + + R ++ MI YD + K
Sbjct: 586 VYSSVICAYSKQGQVTEAESMF-----TKMKMVGCRPDVITYTAMIHAYDVAENWEKASA 640
Query: 217 VFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKWK 261
+F +ME V+PD + AF + GQ K LVL +++ + K
Sbjct: 641 LFLEMETDDVQPDSIACSSLMRAFNKGGQPAKV-LVLAEFMREKK 684
>gi|283797458|ref|ZP_06346611.1| ferredoxin hydrogenase [Clostridium sp. M62/1]
gi|291074825|gb|EFE12189.1| hydrogenase, Fe-only [Clostridium sp. M62/1]
gi|295115958|emb|CBL36805.1| hydrogenases, Fe-only [butyrate-producing bacterium SM4/1]
Length = 588
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 104/250 (41%), Gaps = 28/250 (11%)
Query: 6 SWVMGFGFSNSCRIPPLQTASGFSLLTTKLATSNPHLKCFLNQNKQPPVSNSNANASKKN 65
++ G +CR+ ++ A L+T+ ++ F N + +N
Sbjct: 34 CYLKGINEIGACRVCIVEVAGTSRLVTSCNTPVTEGMEVFTNSARVREARKTNV------ 87
Query: 66 KLVVKVGKKEQHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLI 125
+L++ QH SG L V L +++ ++ A +WT T FPL+
Sbjct: 88 ELILS-----QHHTNCPTCVRSGNCKLQKVANDLNLVTDEYPIHYAKTRWT---TTFPLV 139
Query: 126 -AAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNM 184
A K ++ +R ++ + W + G++ T+ ++ ++ +A +
Sbjct: 140 RDAGKCIKCMRCVQICDKIQSLNVWDVQN-----TGSHTTVDVSRGREIKASDCSLCGQC 194
Query: 185 ILHTQTRSISKRL-FSRMISLYDHHDMPNKIIEV-------FADMEELGVRPDEDTVRRI 236
I H T ++ +R SR+ S+ + P+KI V A EE G+ + T +R+
Sbjct: 195 ITHCPTGALQERDDVSRIFSMNGDLNNPDKITVVQIAPAVRAAWGEEFGLSREFATDKRL 254
Query: 237 ASAFQRVGQD 246
+A +R+G D
Sbjct: 255 VAALRRMGFD 264
>gi|222641578|gb|EEE69710.1| hypothetical protein OsJ_29377 [Oryza sativa Japonica Group]
Length = 577
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 16/167 (9%)
Query: 101 LPNEKHAVYGALDKWTAWETEFPLIAAAKA-LRILRKRGQWLRVIQVAKWMLSKGQGATM 159
LP+E +V+G L E P + A A L L K RV ++ ML +G ++
Sbjct: 121 LPDEALSVFGRL-------RELPALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSV 173
Query: 160 GTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL--FSRMISLYDHHDMPNKIIEV 217
TY+TL+ A H+ D A++ W + R I + ++ MI D +
Sbjct: 174 VTYNTLINAC--RHQGDVAKA-WEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGL 230
Query: 218 FADMEELGVRPDEDTVRRIASA-FQRVGQDDKQKLVLKKYLSKWKYI 263
F +M+E G+RP+ T + S+ F+R + K LV L K +
Sbjct: 231 FLEMKEAGMRPNLYTYNALMSSHFKR--DNIKHALVFYYDLLKCGLV 275
>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 696
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K G R ++ S G T ++LA R EAE+L+ I +
Sbjct: 269 KAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEP-RT 327
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
R ++ ++ Y V ++ME+ GV+PDE T + A+ G+ + ++VLK+
Sbjct: 328 RAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKE 387
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
Query: 161 TYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKR----LFSRMISLYDHHDMPNKIIE 216
Y +++ A+ K + EAES++ T+ + + R ++ MI YD + K
Sbjct: 586 VYSSVICAYSKQGQVTEAESMF-----TKMKMVGCRPDVITYTAMIHAYDVAENWEKASA 640
Query: 217 VFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKWK 261
+F +ME V+PD + AF + GQ K LVL +++ + K
Sbjct: 641 LFLEMETDDVQPDSIACSSLMRAFNKGGQPAKV-LVLAEFMREKK 684
>gi|359483464|ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Vitis vinifera]
Length = 506
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 69/163 (42%), Gaps = 4/163 (2%)
Query: 92 LNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWML 151
++L +S L + +V LD W + + + + LRKR ++ + +++++WM
Sbjct: 39 ISLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEWMS 98
Query: 152 SKGQGATMGTYDTLLLAFDKDHRAD-EAESLWNMILHTQTRSISKRLFSRMISLYDHHDM 210
KG A T + L R AES +N + Q + + + +++ Y
Sbjct: 99 KKGICAFSPTEHAVQLDLIGRVRGFLSAESYFNSL---QNHDKTDKTYGALLNCYVRQRQ 155
Query: 211 PNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
+K + M+E+G T I + VGQ +K VL
Sbjct: 156 TDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVL 198
>gi|55295905|dbj|BAD67773.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 1013
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/221 (17%), Positives = 97/221 (43%), Gaps = 15/221 (6%)
Query: 43 KCFLNQNKQPPVSNSNANASKKNKLVVKVGKKEQ--HLWQKRDSAGSGQKALNLVRIVSE 100
K F + PV S NA + + GK E+ L+ + G A+ + +V+
Sbjct: 633 KLFETASTSFPVGGSVYNAMVDA--LCRCGKTEEAYRLFMELIDQGHNGDAVTISILVTH 690
Query: 101 LPNEK------HAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKG 154
L ++ + +Y L E E + ++ + + G+ + + M+S G
Sbjct: 691 LTKQEKFQEAENIIYRCLHD----EAELDTVVYNTFIKSMLESGKLYSAVSIYDRMISSG 746
Query: 155 QGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKI 214
+M T++ ++ + + + ++A +++ I ++ ++ M+S Y ++
Sbjct: 747 IPRSMQTFNIMISVYGQGGKLEKAVEMFSAA-QELGLPIDEKTYTNMLSFYGKAGKHHEA 805
Query: 215 IEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
+F+ M+E G+RP + + + +A+ G ++ +++ ++
Sbjct: 806 SLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQE 846
>gi|412991232|emb|CCO16077.1| predicted protein [Bathycoccus prasinos]
Length = 671
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 148 KWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDH 207
K + G TM TY +L+ A K ++A EAE ++N + +F+ + Y
Sbjct: 145 KKLKDSGHRPTMKTYTSLICALGKQNKAKEAEEIFNQEARVEF-DCDAAIFNAITHGYCE 203
Query: 208 HDMPNKIIEVFAD--MEELGV--RPD 229
+D P++ ++ F D +EE+G+ RPD
Sbjct: 204 NDQPDEAMQ-FVDSWVEEIGLCDRPD 228
>gi|295090032|emb|CBK76139.1| hydrogenases, Fe-only [Clostridium cf. saccharolyticum K10]
Length = 588
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 104/250 (41%), Gaps = 28/250 (11%)
Query: 6 SWVMGFGFSNSCRIPPLQTASGFSLLTTKLATSNPHLKCFLNQNKQPPVSNSNANASKKN 65
++ G +CR+ ++ A L+T+ ++ F N + +N
Sbjct: 34 CYLKGINEIGACRVCIVEVAGTSRLVTSCNTPVTEGMEVFTNSARVREARKTNV------ 87
Query: 66 KLVVKVGKKEQHLWQKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLI 125
+L++ QH SG L V L +++ ++ A +WT T FPL+
Sbjct: 88 ELILS-----QHHTNCPTCVRSGNCKLQKVANDLNLVTDEYPIHYAKTRWT---TTFPLV 139
Query: 126 -AAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNM 184
A K ++ +R ++ + W + G++ T+ ++ ++ +A +
Sbjct: 140 RDAGKCIKCMRCVQICDKIQSLNVWDVQN-----TGSHTTVDVSRGREIKASDCSLCGQC 194
Query: 185 ILHTQTRSISKRL-FSRMISLYDHHDMPNKIIEV-------FADMEELGVRPDEDTVRRI 236
I H T ++ +R SR+ S+ + P+KI V A EE G+ + T +R+
Sbjct: 195 ITHCPTGALQERDDVSRIFSMNGDLNNPDKITVVQIAPAVRAAWGEEFGLSREFATDKRL 254
Query: 237 ASAFQRVGQD 246
+A +R+G D
Sbjct: 255 VAALRRMGFD 264
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 144 IQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMIS 203
I VA+ + + + ++++++ + K + D A+++++ + S +S MIS
Sbjct: 292 IMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVS-----WSSMIS 346
Query: 204 LYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLV 252
Y +D+ ++ + +F +M+ G +PDE T+ + SA R+ ++ K V
Sbjct: 347 GYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWV 395
>gi|168006155|ref|XP_001755775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693094|gb|EDQ79448.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 429
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 161 TYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFAD 220
+Y T++ AF K ++AE L+ ++ ++ +S R F+ ++S Y + +K ++ D
Sbjct: 227 SYITVIEAFGKLGMVEKAEELYEVMSQSKGLILS-RQFNSLLSAYTRQGLMDKAEKLMDD 285
Query: 221 MEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYL 257
ME+LG + + T + + + + Q DK +K+ L
Sbjct: 286 MEKLGRKKNAITYHHLVTGYLKTDQLDKAVAAMKEAL 322
>gi|357502627|ref|XP_003621602.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496617|gb|AES77820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 613
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%)
Query: 124 LIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWN 183
L+A + L K G+ QV M S GQ TY+ L+ + +K ++ +EA ++N
Sbjct: 395 LVACNVLINSLGKEGELKLAFQVYNTMKSFGQKPDAYTYNALMSSLNKANKHNEALKIFN 454
Query: 184 MILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGV 226
I +Q +K L++ + + ++ +E+ ME G+
Sbjct: 455 RIERSQICEFNKHLYNTALMSCSELRLWDRAVEILWKMEASGL 497
>gi|92118128|ref|YP_577857.1| extracellular ligand-binding receptor [Nitrobacter hamburgensis
X14]
gi|91801022|gb|ABE63397.1| amino acid/amide ABC transporter substrate-binding protein, HAAT
family [Nitrobacter hamburgensis X14]
Length = 373
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 189 QTRSISKRLFSRMISLYDHHDMPNKII---EVFADMEELGVRPDED----TVRRIASAFQ 241
Q RSI++R+ SR I H + I E +AD L + P T R + + +
Sbjct: 80 QARSIAERIASRGIPFVAGHFCSSSSIPASEAYADGNVLQITPASTNPLFTERNLWNVLR 139
Query: 242 RVGQDDKQKLVLKKYLSKWKYIHFKGERVRVRRD 275
G+DD+Q +V +Y+ K +FKG+ V + D
Sbjct: 140 ICGRDDQQGVVAAEYIVK----NFKGKNVAILND 169
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ + K+G + I++ K ML G + +Y T++ K + +EA L N++++ +
Sbjct: 440 INFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMIN-KG 498
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQR 242
+ + ++S M S +KII++F +++ VR D + S+ +
Sbjct: 499 ITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCK 550
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 6/147 (4%)
Query: 124 LIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWN 183
LI+ + + L K G+ +++ M++KG Y ++ A ++ R D+ +++
Sbjct: 468 LISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFD 527
Query: 184 MILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDT----VRRIAS- 238
I RS L++ +IS ++ I+ FA M G P+E T +R +AS
Sbjct: 528 SIQDATVRS-DAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASE 586
Query: 239 AFQRVGQDDKQKLVLKKYLSKWKYIHF 265
R QD +L ++ + K HF
Sbjct: 587 GLVREAQDLLSELCSRRAVRKHLVRHF 613
>gi|238481433|ref|NP_001154751.1| tetracopeptide epeat-containing protein-like protein [Arabidopsis
thaliana]
gi|332006684|gb|AED94067.1| tetracopeptide epeat-containing protein-like protein [Arabidopsis
thaliana]
Length = 284
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 8/126 (6%)
Query: 128 AKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEA------ESL 181
K +RI R G W + + + + + G + Y++++ F K DE E +
Sbjct: 89 GKIIRIYRDNGMWKKALGIVEEIREIGLPMDVEIYNSVIDTFGKYGELDEELQFGSFEDI 148
Query: 182 WNMI--LHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASA 239
++ L +Q + S LF + + Y + + ++V ME G+ P+ + + +A
Sbjct: 149 GELVGKLKSQGVAPSANLFCTLANAYAQQGLCKQTVKVLKMMENEGIEPNLIMLNVLINA 208
Query: 240 FQRVGQ 245
F G+
Sbjct: 209 FGTAGK 214
>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Glycine max]
Length = 586
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 159 MGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVF 218
M +++L + K EA++L+ +L S ++ MI+ Y H + NK +E+F
Sbjct: 244 MSVANSVLDMYMKCGLTVEADALFREMLERNVVS-----WTVMITGYGKHGIGNKAVELF 298
Query: 219 ADMEELGVRPDEDTVRRIASAFQRVG 244
+M+E G+ PD T + SA G
Sbjct: 299 NEMQENGIEPDSVTYLAVLSACSHSG 324
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L RG+ + + K M S G + TY+TL+ F K+ R +EAE +++ + + I
Sbjct: 466 LCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFD---EMELQGI 522
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEEL---GVRPDEDTVRRIASAFQRVG 244
S+ + + +L D ++ E M+++ G++PD+ T + + F R G
Sbjct: 523 SRNVVTYN-TLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAG 575
>gi|357446577|ref|XP_003593564.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482612|gb|AES63815.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 495
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 71/170 (41%), Gaps = 4/170 (2%)
Query: 80 QKRDSAGSGQKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQ 139
+ R S K +L ++S L N+ +V LD W + + + +R LRKR +
Sbjct: 16 RNRSYYTSKTKKPSLYSVISPLGNQTTSVAPQLDDWVYKGNKVSVGELQRIVRDLRKRSR 75
Query: 140 WLRVIQVAKWMLSKGQGATMGTYDTLLLAFD-KDHRADEAESLWNMILHTQTRSISKRLF 198
+ + +QV++WM G + L + H AE+ +N + + +++
Sbjct: 76 FTQALQVSEWMNKIGVCIFSPVEHAVHLDLTGRVHGFYAAETYFNSLKDIER---NEKTH 132
Query: 199 SRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+++ Y +K + M+ELG T I + +GQ +K
Sbjct: 133 GALLNCYVRQRQVDKSLSHLKKMKELGFALSSLTYNNIMCLYTNIGQHEK 182
>gi|356562139|ref|XP_003549331.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 689
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Query: 162 YDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADM 221
Y+ L F K D E L++ +L R + FS +IS +PNK +E F M
Sbjct: 169 YNVTLKVFRKSKDLDAMEKLFDEMLQRGVRPDNVS-FSTIISCARICSLPNKAVEWFEKM 227
Query: 222 EELGVRPDEDTVRRIASAFQRVGQDD 247
PD+ T + A+ R G D
Sbjct: 228 PSFRCEPDDVTYSAMIDAYGRAGNID 253
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 150 MLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLY---- 205
M S G TY +++ AF K D+AE L+ L + + + + M+ +Y
Sbjct: 1025 MKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEE-LRSNGYKLDRSFYHLMMKMYRTSG 1083
Query: 206 DHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLK 254
DH N ++E+ M+E G+ P+ T+ + ++ + GQ ++ +LK
Sbjct: 1084 DHQKAEN-LLEI---MKEAGIEPNTATMHLLMVSYGKSGQPEEADRILK 1128
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
L K G +V +++ M+ G G TY+T++ + K R DEA L+ + +
Sbjct: 413 LYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYR-DMKSSG 471
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
R+ ++ +I L + +V ++M + GV+P T + A+ +VG+
Sbjct: 472 RNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALICAYAKVGR 526
>gi|302801820|ref|XP_002982666.1| hypothetical protein SELMODRAFT_421954 [Selaginella moellendorffii]
gi|300149765|gb|EFJ16419.1| hypothetical protein SELMODRAFT_421954 [Selaginella moellendorffii]
Length = 796
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 158 TMGTYDTLLLAFDKDHRADEAESLWNMILHTQ-TRSISKRL-FSRMISLYDHHDMPNKII 215
T Y+TL+ + K H+ DEA W Q +R + F+ ++SLY + K++
Sbjct: 169 TTVAYNTLIKVYGKAHKLDEA---WGYYKEMQDSRCVPDIFTFNTLMSLYSYAGQSEKVL 225
Query: 216 EVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
EV+ +M+++G D + +VG+ D ++ ++
Sbjct: 226 EVYDEMQKIGCSLDRVGYEVVVPHAGKVGRLDLACMLFER 265
>gi|297827241|ref|XP_002881503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327342|gb|EFH57762.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 669
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 199 SRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLS 258
+ +I+ Y H + +F M+ LG +PD T+ + SAF G DK + + L+
Sbjct: 436 TAIITAYAVHGDSDSACSLFDQMQCLGTKPDNVTLTAVLSAFAHSGDSDKAQHIFDSMLT 495
Query: 259 KW 260
K+
Sbjct: 496 KY 497
>gi|255542942|ref|XP_002512534.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548495|gb|EEF49986.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 444
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 142 RVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRM 201
R I A+ + + G ++++++ + K ++A++L++++ S +S M
Sbjct: 208 REIDSAQKLFNVGYSLDQISWNSMISGYLKCGEIEKAKALFDIMNDKDLVS-----WSAM 262
Query: 202 ISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQK 250
IS Y HD + + +F +M+ GV+PDE T+ + SA + D+ K
Sbjct: 263 ISGYAQHDRFAETLALFQEMQLDGVKPDETTLVSVVSACTHLAALDQGK 311
>gi|218197431|gb|EEC79858.1| hypothetical protein OsI_21342 [Oryza sativa Indica Group]
Length = 1013
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/221 (17%), Positives = 97/221 (43%), Gaps = 15/221 (6%)
Query: 43 KCFLNQNKQPPVSNSNANASKKNKLVVKVGKKEQ--HLWQKRDSAGSGQKALNLVRIVSE 100
K F + PV S NA + + GK E+ L+ + G A+ + +V+
Sbjct: 633 KLFETASTSFPVGGSVYNAMVDA--LCRCGKTEEAYRLFMELIDQGHNGDAVTISILVTH 690
Query: 101 LPNEK------HAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKG 154
L ++ + +Y L E E + ++ + + G+ + + M+S G
Sbjct: 691 LTKQEKFQEAENIIYRCLHD----EAELDTVVYNTFIKSMLESGKLYSAVSIYDRMISSG 746
Query: 155 QGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKI 214
+M T++ ++ + + + ++A +++ I ++ ++ M+S Y ++
Sbjct: 747 IPRSMQTFNIMISVYGQGGKLEKAVEMFSAA-QELGLPIDEKTYTNMLSFYGKAGKHHEA 805
Query: 215 IEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
+F+ M+E G+RP + + + +A+ G ++ +++ ++
Sbjct: 806 SLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQE 846
>gi|302798857|ref|XP_002981188.1| hypothetical protein SELMODRAFT_420654 [Selaginella moellendorffii]
gi|300151242|gb|EFJ17889.1| hypothetical protein SELMODRAFT_420654 [Selaginella moellendorffii]
Length = 796
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 158 TMGTYDTLLLAFDKDHRADEAESLWNMILHTQ-TRSISKRL-FSRMISLYDHHDMPNKII 215
T Y+TL+ + K H+ DEA W Q +R + F+ ++SLY + K++
Sbjct: 169 TTVAYNTLIKVYGKAHKLDEA---WGYYKEMQDSRCVPDIFTFNTLMSLYSYAGQSEKVL 225
Query: 216 EVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
EV+ +M+++G D + +VG+ D ++ ++
Sbjct: 226 EVYDEMQKIGCSLDRVGYEVVVPHAGKVGRLDLACMLFER 265
>gi|255661204|gb|ACU25771.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 426
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLV 252
+FSRMI L+ + ++EVF M LG PD + + + +A+ ++ + DK V
Sbjct: 357 VFSRMIDLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKAHXV 412
>gi|224061145|ref|XP_002300357.1| predicted protein [Populus trichocarpa]
gi|222847615|gb|EEE85162.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K G I++ K M S+G + TY ++ + + +EA + + ++ +S
Sbjct: 322 KGGDMKEAIEIMKLMESRGLKPDVYTYTVIISGYSNGGQMEEACYILSEAKKKHSK-LSP 380
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAF 240
+ +I Y D +K +E+ A+ME+ GV+P+ D ++ +
Sbjct: 381 VTYHALIRGYCKLDQFDKALELLAEMEKFGVQPNADEYNKLIQSL 425
>gi|224137724|ref|XP_002322628.1| predicted protein [Populus trichocarpa]
gi|222867258|gb|EEF04389.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 178 AESLWNMILHTQTRSISKRLF-------------SRMISLYDHHDMPNKIIEVFADMEEL 224
A +L NM SI++++F + MI+ Y HH + IE+F DM+ L
Sbjct: 298 ASALLNMYSKCGELSIARKIFDDVVISQRDLVLWNGMIAAYAHHGCGMEAIELFEDMQGL 357
Query: 225 GVRPDEDTVRRIASAFQRVGQDDK 248
G +P++ + + SA G D+
Sbjct: 358 GFKPNDVSYVELLSACSHAGLVDE 381
>gi|15232594|ref|NP_190245.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206903|sp|Q9SNB7.1|PP264_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g46610
gi|6523064|emb|CAB62331.1| hypothetical protein [Arabidopsis thaliana]
gi|332644660|gb|AEE78181.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 144 IQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL--FSRM 201
IQ+ K M+ G+ T+ +Y LL A +K DEA +WN H I L ++ M
Sbjct: 478 IQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWN---HMIKVGIEPNLYAYTTM 534
Query: 202 ISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
S+ N + + +M G+ P T + S R G
Sbjct: 535 ASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNG 577
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/136 (20%), Positives = 68/136 (50%), Gaps = 1/136 (0%)
Query: 124 LIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWN 183
++A + + K G+ ++ K M+ +G TY +L+ F K+++ D+A + +
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 184 MILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRV 243
+++ ++ + R F+ +I+ Y ++ + +E+F M GV D T + F +
Sbjct: 377 LMV-SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435
Query: 244 GQDDKQKLVLKKYLSK 259
G+ + K + ++ +S+
Sbjct: 436 GKLEVAKELFQEMVSR 451
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 12/140 (8%)
Query: 122 FPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESL 181
P A A+ I G+W+ V + K + S +++ T +L+ + K + A +
Sbjct: 374 LPACAHLGAIDI----GRWIHV-YIDKRLKSATNASSLRT--SLIDMYAKCGDIEAAHQV 426
Query: 182 WNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQ 241
+N ILH S + +F + H + ++F+ M ++G+ PD+ T + SA
Sbjct: 427 FNSILHKSLSSWNAMIFG-----FAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACS 481
Query: 242 RVGQDDKQKLVLKKYLSKWK 261
R G D + + + +K
Sbjct: 482 RSGMLDLGRHIFRTMTQDYK 501
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 160 GTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFA 219
+++++L F + D+A +N I S ++ M++ Y HD+ N+ E+F
Sbjct: 435 ASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVS-----WNTMVNAYVKHDLFNESFEIFC 489
Query: 220 DMEELGVRPDEDTVRRIASAFQRVG 244
M+ V+PD+ T+ + S+ +VG
Sbjct: 490 KMQSSNVKPDKTTLISLLSSCAKVG 514
>gi|319951788|ref|YP_004163055.1| dead/deah box helicase domain protein [Cellulophaga algicola DSM
14237]
gi|319420448|gb|ADV47557.1| DEAD/DEAH box helicase domain protein [Cellulophaga algicola DSM
14237]
Length = 429
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 176 DEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIE----VFADMEELGVRPDED 231
DEA+ + +M + I +L ++ SL+ MP I+E + + E++ ++P++
Sbjct: 155 DEADQMLDMGFIHDVKKIIAKLPAKRQSLFFSATMPKTIVELSQKILGEFEQVTIKPEQA 214
Query: 232 TVRRIASAFQRVGQDDKQKLVL 253
T ++ A V + DK KL++
Sbjct: 215 TAEKVEQAIYFVPKGDKVKLLV 236
>gi|449516814|ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like isoform 1 [Cucumis sativus]
Length = 703
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 163 DTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADME 222
+ +++ F K+ D+A +++M+ S +S MIS Y +++P+ +++F M
Sbjct: 395 NVMIVGFTKNGMIDQARQIFDMMPEKDVFS-----WSTMISGYAQNELPDVALDLFHGMI 449
Query: 223 ELGVRPDEDTVRRIASAFQRVGQ 245
+ V P+E T+ + SA +G+
Sbjct: 450 DSKVEPNEITMVSVFSAIAALGK 472
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 150 MLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLY---- 205
M S G + TY +L+ AF+K ++AE L+ L + + + + M+ Y
Sbjct: 1010 MRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEE-LRSNGYKLDRAFYHLMMKTYRTSG 1068
Query: 206 DHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLK 254
DH N + A M+E G+ P T+ + ++ + GQ ++ + VLK
Sbjct: 1069 DHRKAEN----LLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLK 1113
>gi|147821710|emb|CAN68290.1| hypothetical protein VITISV_019715 [Vitis vinifera]
Length = 717
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 144 IQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMIS 203
I AK + + + +++++L F K ++A L++ + R + ++ M++
Sbjct: 312 IDEAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEM---PCRDVVS--WNSMLA 366
Query: 204 LYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLS 258
Y PN+++ +F M +GV+P E TV + SA +G DK L L Y++
Sbjct: 367 CYAQCGKPNEVLALFDQMRAVGVKPTEATVVSLLSACAHLGALDK-GLHLHTYIN 420
>gi|147807263|emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
Length = 506
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 69/163 (42%), Gaps = 4/163 (2%)
Query: 92 LNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWML 151
++L +S L + +V LD W + + + + LRKR ++ + +++++WM
Sbjct: 39 ISLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEWMS 98
Query: 152 SKGQGATMGTYDTLLLAFDKDHRAD-EAESLWNMILHTQTRSISKRLFSRMISLYDHHDM 210
KG A T + L R AES +N + Q + + + +++ Y
Sbjct: 99 KKGICAFSPTEHAVQLDLIGRVRGFLSAESYFNSL---QNHDKTDKTYGALLNCYVRQRQ 155
Query: 211 PNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
+K + M+E+G T I + VGQ +K VL
Sbjct: 156 TDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVL 198
>gi|357125571|ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 600
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 199 SRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLV 252
S MI Y M N+ + +F DM+ +GV PDE T+ + SA + G D K V
Sbjct: 198 SSMIGGYSRMGMVNEALGLFRDMQAVGVNPDEVTMVSVISACAKAGALDLGKWV 251
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query: 133 ILRKRGQWLRVIQVAKWMLSKG--QGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+L GQ+ +V ++ M ++G Q T+ TY L+ AF K R D A L N +
Sbjct: 203 MLIHEGQYEKVHELYNEMSNEGHCQPDTV-TYSALISAFCKLGRQDSAIRLLNEMKENGM 261
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+ +K +++ +ISL+ D + + +F +M + RPD T + + G+ D+
Sbjct: 262 QPTAK-IYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDE 318
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 11/71 (15%)
Query: 199 SRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLS 258
S M+S Y M N+ + +F +M+ +GV PDE T+ + SA + G D L
Sbjct: 246 SAMVSGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALD---------LG 296
Query: 259 KW--KYIHFKG 267
KW YI KG
Sbjct: 297 KWVHAYIDRKG 307
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 11/71 (15%)
Query: 199 SRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLS 258
S M+S Y M N+ + +F +M+ +GV PDE T+ + SA + G D L
Sbjct: 197 SAMVSGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALD---------LG 247
Query: 259 KW--KYIHFKG 267
KW YI KG
Sbjct: 248 KWVHAYIDRKG 258
>gi|452824912|gb|EME31912.1| mitochondrial protein translocase, MPT family isoform 1 [Galdieria
sulphuraria]
Length = 464
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 150 MLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL--FSRMISLYDH 207
M S G TY+TL+ A+ R D AE+ + QT +L F+ +++ Y
Sbjct: 272 MESDGIEPDRVTYNTLIKAYGYMRRHDLAEAAFKQ----QTSKFGPQLVGFNTLMNGYCE 327
Query: 208 HDMPNKIIEVFADMEELGVRPDEDTVRRI 236
++++E+FA ++ELG++PD T I
Sbjct: 328 DKKFSRVLELFAQLKELGLKPDVKTYSTI 356
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 161 TYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFAD 220
+Y TL++ + KD ++ EA LW+ + + S ++ MI H ++ I+ +
Sbjct: 494 SYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIP-SIITYNTMIGGLCHSGKTDQSIDKLNE 552
Query: 221 MEELGVRPDEDTVRRIASAFQRVGQDDK 248
+ E G+ PDE T I + R GQ +K
Sbjct: 553 LLESGLVPDETTYNTIILGYCREGQVEK 580
>gi|168000146|ref|XP_001752777.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695940|gb|EDQ82281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 694
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 144 IQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMIS 203
I+V + M + GQ + +Y LL A +K + +AE +W +L T+ ++ ++ MI+
Sbjct: 481 IEVFQRMTAAGQQPGVLSYGALLSALEKGNLTSQAEQVWKHMLKVGTKP-NEYAYTTMIT 539
Query: 204 LYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQR 242
+ ++ ++F DM+ G+ P T + +A R
Sbjct: 540 VRGKSGNYSEAADLFYDMQRNGMEPTVVTHNAMITACAR 578
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 161 TYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL--FSRMISLYDHHDMPNKIIEVF 218
+Y+TLL F + RA+EA L +M+ +Q RS + ++ +I+ + +K +F
Sbjct: 167 SYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLF 226
Query: 219 ADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSK 259
+M + G++P+ T + + D+ + V ++ + K
Sbjct: 227 LEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK 267
>gi|297811553|ref|XP_002873660.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319497|gb|EFH49919.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 144 IQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL--FSRM 201
IQ+ K M+ G+ T+ +Y LL A +K DEA +WN H I L ++ M
Sbjct: 487 IQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWN---HMIKVGIEPNLYAYTTM 543
Query: 202 ISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
S+ N + + +M G+ P T + S R G
Sbjct: 544 ASVLTGQQKFNLLDTLLKEMASKGIEPSVVTYNAVISGCARNG 586
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 75/186 (40%), Gaps = 30/186 (16%)
Query: 70 KVGKKEQH-----LWQKRDSAGSGQKALNLV-RIVSELPNEKHAVYGALDKWTAWETEFP 123
KVG H L AG G++ L+L+ +VS Y AL W
Sbjct: 302 KVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDW-------- 353
Query: 124 LIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWN 183
L K+G+ V ++ LS TY L+ A K H DEAE
Sbjct: 354 ----------LGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAE---Q 400
Query: 184 MILHTQTRSISKRL--FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQ 241
++L + +SIS + FS +I+ + + +K E M+E G+ P+ T + F
Sbjct: 401 VLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFF 460
Query: 242 RV-GQD 246
+ GQD
Sbjct: 461 KFQGQD 466
>gi|224112076|ref|XP_002316075.1| predicted protein [Populus trichocarpa]
gi|222865115|gb|EEF02246.1| predicted protein [Populus trichocarpa]
Length = 434
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 57/129 (44%)
Query: 129 KALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHT 188
K L +L + GQ R Q+ M+ +G T Y LL A+ +++ DE S+ N +
Sbjct: 92 KLLVLLGRCGQPQRAHQLFDEMVEEGIEPTTELYTALLAAYCRNNLIDEGFSIINQMKSL 151
Query: 189 QTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+S ++ I ++ +M+E + P+ T + S + RVG D+
Sbjct: 152 PRCQPDVYTYSTLLKACVDASRFELIDTLYQEMDERLISPNTVTQNVVLSGYGRVGMYDQ 211
Query: 249 QKLVLKKYL 257
+ VL + L
Sbjct: 212 MERVLSEML 220
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 7/121 (5%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L K +W + Q+ + MLSKG + TY T++ + K R D+A SL + T RS
Sbjct: 167 LFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGT-GRSP 225
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTV--RRIASAFQRVGQDDKQKL 251
S L+S +I HD ++ E+F E+ +D + S + G+ D+ K
Sbjct: 226 SGSLYSTLIDGLCKHDRHDEARELF----EMAAGDVQDVIVYTSFISGLCKAGKLDEAKA 281
Query: 252 V 252
V
Sbjct: 282 V 282
>gi|449469755|ref|XP_004152584.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Cucumis sativus]
Length = 708
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 150 MLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHD 209
M KG + + Y+T++ AF K ++ +EAE ++ + + S F+ +++ Y
Sbjct: 355 MEKKGVASNVIMYNTIMDAFSKSNQIEEAEGVFAEMKSKGVKPTSAS-FNILMNAYSRRM 413
Query: 210 MPNKIIEVFADMEELGVRPDEDTVRRIASAFQR 242
P + ++ +M+++G+ P+ + + SA+ R
Sbjct: 414 QPEIVEKLLVEMKDMGLEPNVKSYTCLISAYGR 446
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
+ G R +V + G TY L+ F K + + AE L + Q +++
Sbjct: 294 RAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLL-ADMQGQGVGLNQ 352
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
+F+ MI Y M + +++ A ME++GV D T +A RV + D+ K +L
Sbjct: 353 IIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLL 410
>gi|356541109|ref|XP_003539025.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Glycine max]
Length = 681
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 178 AESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIA 237
AE L+ ++ + +I L++ +I+ Y HH NK IE+F +M V+PD T +
Sbjct: 439 AEKLFRLVTDSDRDAI---LYNVIIAGYAHHGFENKAIELFQEMLNKSVKPDAVTFVALL 495
Query: 238 SAFQRVG 244
SA + G
Sbjct: 496 SACRHRG 502
>gi|295830917|gb|ADG39127.1| AT5G21222-like protein [Capsella grandiflora]
Length = 166
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 51/108 (47%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G + +++ + M G T T++TL+ + K + +E+ L ++L + + R
Sbjct: 59 GNLDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRT 118
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
+ ++ + + + + M+ GV+PD T +A A+ R+G+
Sbjct: 119 CNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAXAYARIGE 166
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
L + K G++ + + V K M + G + TY+ LL + K +R DE ++ + +
Sbjct: 408 LSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRV 467
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPD 229
S + +S +I +Y + + +EVF + ++ G++ D
Sbjct: 468 -SPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKAD 505
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ L K+G + I++ K ML G + +Y T++ K + +EA L N++++ +
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVN-KG 526
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
S + ++S + NK+I++F ++++ +R D + S+ + + D+
Sbjct: 527 ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDR 584
>gi|340027381|ref|ZP_08663444.1| DNA polymerase I [Paracoccus sp. TRP]
Length = 944
Score = 38.9 bits (89), Expect = 2.7, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 154 GQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNK 213
G G T ++ + + ++ A++AE W + H + K + + + Y+ + P
Sbjct: 493 GTGRTQISFAEVPVDKASEYAAEDAEVTWRLWDHLR----PKLAPNHVTTAYERLERP-- 546
Query: 214 IIEVFADMEELGVRPDEDTVRRIASAFQR 242
++ V ADME G+R D + +RR++SAF +
Sbjct: 547 MVPVLADMEMTGIRIDAEHLRRMSSAFAQ 575
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI--SK 195
G+ + + + + + S+G ++ TY+ L+ F K A ++ + R I SK
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGA---GKVVKEMEERGIKPSK 408
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQ----KL 251
++ +I + D K I++ + MEELG+ PD T + F GQ ++ KL
Sbjct: 409 ITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKL 468
Query: 252 VLKKYLSKWKYIH 264
++ K L K I+
Sbjct: 469 MVAKKLEPNKVIY 481
>gi|295830909|gb|ADG39123.1| AT5G21222-like protein [Capsella grandiflora]
gi|295830919|gb|ADG39128.1| AT5G21222-like protein [Capsella grandiflora]
Length = 166
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 51/108 (47%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G + +++ + M G T T++TL+ + K + +E+ L ++L + + R
Sbjct: 59 GNLDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRT 118
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
+ ++ + + + + M+ GV+PD T +A A+ R+G+
Sbjct: 119 CNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAXAYARIGE 166
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G + + MLSKG T TY +L+ + +R EA+ L+ IL Q S +
Sbjct: 438 GNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILD-QGVSPDVIM 496
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
F+ M+ + + + + +M+ V PDE T + R G+ ++ +++L +
Sbjct: 497 FNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 554
>gi|357491823|ref|XP_003616199.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355517534|gb|AES99157.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 872
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Query: 142 RVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRM 201
+ +Q+ ML + + Y TL+ F K + +A L+ + + + + + +
Sbjct: 621 KALQLLPVMLKRNVLPGVVNYSTLISCFAKQTNSKKAVKLFTRMTKVGI-TFNIKTHTAL 679
Query: 202 ISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSK 259
I L + +K ++F DME+ GV PD+ T + +AF G+ K + + L +
Sbjct: 680 IDLCIRNCKIDKACDLFEDMEKRGVHPDQITYNTLIAAFCNTGEMIIAKTLFDRMLQE 737
>gi|297835316|ref|XP_002885540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331380|gb|EFH61799.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 841
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Query: 133 ILRKRGQWLRVIQVAKWMLSKG-QGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTR 191
IL+++ +W R +++ +W SKG + Y+ +L K + +SLW+ ++ +
Sbjct: 159 ILKEQTRWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIK 218
Query: 192 SISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKL 251
I+ + +I +Y + + M ++G++PDE T + +++ + K +
Sbjct: 219 PINST-YGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEE 277
Query: 252 VLKK 255
KK
Sbjct: 278 FFKK 281
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/147 (19%), Positives = 69/147 (46%), Gaps = 4/147 (2%)
Query: 103 NEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTY 162
+E A+Y L + + ET++P + + + L + +R + + + + A T+
Sbjct: 661 DEAEAIYRKLLR-SCNETQYPDVYTSNCMINLYSQRSMVRKAEAIFESMKQRREANEFTF 719
Query: 163 DTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL-FSRMISLYDHHDMPNKIIEVFADM 221
+L + K+ R +EA + + + R ++ L ++ ++ LY + +E F +M
Sbjct: 720 AMMLCMYKKNGRFEEATQIAKQM--REMRILTDPLSYNSVLGLYALDGRFKEAVETFKEM 777
Query: 222 EELGVRPDEDTVRRIASAFQRVGQDDK 248
G++PD+ T + + + ++G K
Sbjct: 778 VSSGIQPDDSTFKSLGTILIKLGMSKK 804
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 9/124 (7%)
Query: 132 RILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTR 191
+L K W + VA M S+G A + A+ + EAE ++ R
Sbjct: 450 EMLEKSWSWFKRFHVAGNMSSEGYSANID-------AYGERGYLSEAERVFICCQEVNKR 502
Query: 192 SISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKL 251
++ + ++ MI Y K E+F M GV PD+ T + DK K
Sbjct: 503 TVLE--YNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKC 560
Query: 252 VLKK 255
L+K
Sbjct: 561 YLEK 564
>gi|295830915|gb|ADG39126.1| AT5G21222-like protein [Capsella grandiflora]
Length = 166
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 51/108 (47%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G + +++ + M G T T++TL+ + K + +E+ L ++L + + R
Sbjct: 59 GNLDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRT 118
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
+ ++ + + + + M+ GV+PD T +A A+ R+G+
Sbjct: 119 CNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGE 166
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ L K+G + I++ K ML G + +Y T++ K + +EA L N++++ +
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVN-KG 526
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
S + ++S + NK+I++F ++++ +R D + S+ + + D+
Sbjct: 527 ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDR 584
>gi|295830913|gb|ADG39125.1| AT5G21222-like protein [Capsella grandiflora]
Length = 166
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 51/108 (47%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G + +++ + M G T T++TL+ + K + +E+ L ++L + + R
Sbjct: 59 GNLDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRT 118
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
+ ++ + + + + M+ GV+PD T +A A+ R+G+
Sbjct: 119 CNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGE 166
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L K G ++ +++ M G T TY L+ + K+ ++ A+++++ + TQ
Sbjct: 235 LVKGGNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDE-MRTQRCKP 293
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
+ F+ +++ + K E+F M+E G PD + ++ R G
Sbjct: 294 NICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAG 344
>gi|345293243|gb|AEN83113.1| AT5G21222-like protein, partial [Capsella rubella]
gi|345293245|gb|AEN83114.1| AT5G21222-like protein, partial [Capsella rubella]
gi|345293247|gb|AEN83115.1| AT5G21222-like protein, partial [Capsella rubella]
gi|345293249|gb|AEN83116.1| AT5G21222-like protein, partial [Capsella rubella]
gi|345293251|gb|AEN83117.1| AT5G21222-like protein, partial [Capsella rubella]
gi|345293253|gb|AEN83118.1| AT5G21222-like protein, partial [Capsella rubella]
gi|345293255|gb|AEN83119.1| AT5G21222-like protein, partial [Capsella rubella]
gi|345293257|gb|AEN83120.1| AT5G21222-like protein, partial [Capsella rubella]
Length = 160
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 51/108 (47%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G + +++ + M G T T++TL+ + K + +E+ L ++L + + R
Sbjct: 53 GNLDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRT 112
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
+ ++ + + + + M+ GV+PD T +A A+ R+G+
Sbjct: 113 CNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLARAYARIGE 160
>gi|357499079|ref|XP_003619828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494843|gb|AES76046.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 895
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 147 AKWMLSKGQGATMGTYD----TLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMI 202
A ML K Q + D TL +AF ++ + D AESL N I + + ++ ++
Sbjct: 415 AMRMLKKMQQENLKLVDSTLATLSVAFSRELQLDLAESLLNQI----SECLYPHPYNALL 470
Query: 203 SLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAF 240
+ D + P + + VFA M ++ + PD T + S F
Sbjct: 471 ASCDALNQPERAVRVFAKMRKIKLLPDMRTYELLFSLF 508
>gi|357462685|ref|XP_003601624.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490672|gb|AES71875.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 124 LIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWN 183
+++ LR+ + G + + + M KG + TY+T++ + K D+A N
Sbjct: 371 VVSYNTVLRVYGEAGLFGEAVHLFSLMQMKGVPQNVVTYNTMISIYGKSLEHDKAT---N 427
Query: 184 MILHTQTRSISKR--LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQ 241
+I Q+R I +S +IS+++ ++ +F + GV+ DE + + A+Q
Sbjct: 428 LIQEMQSRGIQPNAITYSTIISIWEKAGKLDRAAMLFHKLRTSGVKIDEILYQTMIVAYQ 487
Query: 242 RVG 244
+ G
Sbjct: 488 KAG 490
>gi|298712189|emb|CBJ33061.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 531
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 20/103 (19%)
Query: 84 SAGSGQK--ALNLVR------IVSELPNEKHAVYGALDKWTA--WETEFPLIAAAKALR- 132
AG+GQ AL L+R I + N KHA+Y D T WE L+ ++ LR
Sbjct: 118 CAGTGQASTALRLLREMEERGIEATASNYKHALYACCDSKTGENWEAAAALLRRSETLRN 177
Query: 133 ---------ILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLL 166
R+ GQW + ++V + M G + YDT++
Sbjct: 178 NFFYGRVIMACRRAGQWQKALEVLREMSRVGLAPDIFCYDTVI 220
>gi|297792071|ref|XP_002863920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309755|gb|EFH40179.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 498
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 128 AKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILH 187
K + +L K Q + ++ + M+++G Y LL A+ + R D A +L +
Sbjct: 157 VKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALLSAYSRSGRFDAAFTLLERMKS 216
Query: 188 TQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAF-QRVGQD 246
+ +S +I + +K+ ++ +DM LG+RP+ T + S Q +G+D
Sbjct: 217 SHNCQPDVHTYSILIKSFLQVFAFDKVHDLLSDMRRLGIRPNTITFVEMESTLIQMLGED 276
Query: 247 D 247
D
Sbjct: 277 D 277
>gi|75676398|ref|YP_318819.1| extracellular ligand-binding receptor [Nitrobacter winogradskyi
Nb-255]
gi|74421268|gb|ABA05467.1| amino acid/amide ABC transporter substrate-binding protein, HAAT
family [Nitrobacter winogradskyi Nb-255]
Length = 371
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 189 QTRSISKRLFSRMISLYDHHDMPNKII---EVFADMEELGVRPDED----TVRRIASAFQ 241
Q RSI++R+ SR I L H + I E +AD L + P T R++ + +
Sbjct: 80 QARSIAERIASRGIPLVAGHFCSSSSIPASEAYADGNTLQITPATTNPLFTERKLWNVLR 139
Query: 242 RVGQDDKQKLVLKKYLSKWKYIHFKGERVRVRRD 275
G+DD+Q +V +Y+ K +FK + + + D
Sbjct: 140 VCGRDDQQGIVAAEYIVK----NFKDKNIAILND 169
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSIS- 194
K G+ +++ M G TY+ +L K R++E + M+ ++ S
Sbjct: 398 KAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNE---MIKMLCDMKSNGCSP 454
Query: 195 -KRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQD 246
+ ++ M++L + M + VF +M+ G PD DT + SA+ R G +
Sbjct: 455 NRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSE 507
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ R+RG + Q+ M + G T+++LL + K R +EA + + +
Sbjct: 263 ISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAGC 322
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD 247
+ S ++ +IS Y + + +E+ +ME G++PD T + S R+G+ D
Sbjct: 323 -TPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKID 378
>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
Length = 618
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 14/146 (9%)
Query: 101 LPNEKHAVYGALDKWTAWETEFPLIAAAKA-LRILRKRGQWLRVIQVAKWMLSKGQGATM 159
LP+E +V+G L E P + A A L L K RV ++ ML +G ++
Sbjct: 121 LPDEALSVFGRL-------RELPALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSV 173
Query: 160 GTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL--FSRMISLYDHHDMPNKIIEV 217
TY+TL+ A H+ D A++ W + R I + ++ MI D +
Sbjct: 174 VTYNTLINAC--RHQGDVAKA-WEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGL 230
Query: 218 FADMEELGVRPDEDTVRRIASA-FQR 242
F +M+E G+RP+ T + S+ F+R
Sbjct: 231 FLEMKEAGMRPNLYTYNALMSSHFKR 256
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 161 TYDTLLLAFDKDHRADEA-ESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFA 219
TY+TLL + K R EA E L M ++ + SI ++ +IS Y + + +E+
Sbjct: 141 TYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVT--YNSLISAYARDGLLEEAMELKN 198
Query: 220 DMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
M E G++ D T + S F R G+D+ V ++
Sbjct: 199 QMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEE 234
>gi|356540087|ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 667
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+F MI+L+ + ++EVF M E+G PD D + + +AF ++ + DK
Sbjct: 527 VFGCMINLFSKNKKYANVVEVFEKMREVGYFPDSDVIALVLNAFGKLREFDK 578
>gi|356540373|ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 881
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 7/142 (4%)
Query: 122 FPL--IAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAE 179
FPL +K + I R G W + I+V + + +G ++++ F K DEA
Sbjct: 220 FPLNSFMYSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTHICNSIIDTFGKYGELDEAL 279
Query: 180 SLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASA 239
L+ + R + ++ +I + K +F DM+E G+ PD I S
Sbjct: 280 KLFKKMQKEGVRP-NIVTWNSLIKWHCKEGDFMKAFHLFTDMQEQGLYPDPKIFVTIISC 338
Query: 240 FQRVGQDDKQKLVLKKYLSKWK 261
G+ D ++KKY K
Sbjct: 339 LGEQGKWD----IIKKYFESMK 356
>gi|295830911|gb|ADG39124.1| AT5G21222-like protein [Capsella grandiflora]
Length = 166
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 51/108 (47%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G + +++ + M G T T++TL+ + K + +E+ L ++L + + R
Sbjct: 59 GNLDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRT 118
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
+ ++ + + + + M+ GV+PD T +A A+ R+G+
Sbjct: 119 CNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLARAYARIGE 166
>gi|255547888|ref|XP_002515001.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546052|gb|EEF47555.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 466
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 82/202 (40%), Gaps = 10/202 (4%)
Query: 55 SNSNANASKKNKLV---VKVGKKEQHLWQKRDSAGSGQKAL-----NLVRIVSELPNEKH 106
S+ + NA+ N + KV + E+ W ++ G G +V+ N
Sbjct: 182 SHISPNANTFNIFIHGWCKVNRVEEAYWTIQEMKGHGCTPCVISYSTIVQFYCHRSNFS- 240
Query: 107 AVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLL 166
VY LD+ A ++ + L K ++ +Q+A+ M S G Y++L+
Sbjct: 241 KVYELLDEMEAQGLIPNVVTYTSVMSALAKSEEYEEALQIAQRMKSVGCKPDTLFYNSLI 300
Query: 167 LAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADME-ELG 225
K R +EA ++ + + + ++ MI++ HH K + + ++E +
Sbjct: 301 HTLGKAGRPEEAIQVFEVEMPNTGVPPNTSTYNSMIAMLCHHSQERKALNLLKEIEASII 360
Query: 226 VRPDEDTVRRIASAFQRVGQDD 247
+PD T + + + G D
Sbjct: 361 CKPDVQTYYPLLKSCFKAGSID 382
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 161 TYDTLLLAFDKDHRADEA-ESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFA 219
TY+ LL + K R+ EA E L M + SI ++ +IS Y + +E+
Sbjct: 308 TYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVT--YNSLISAYARDGLLEDALELKN 365
Query: 220 DMEELGVRPDEDTVRRIASAFQRVGQD 246
M E G++PD T + S F++ G+D
Sbjct: 366 QMVEKGIKPDVFTYTTLLSGFEKAGKD 392
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ L K+G + I++ K ML G + +Y T++ K + +EA L N++++ +
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVN-KG 526
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQR 242
S + ++S + NK+I++F ++++ +R D + S+ +
Sbjct: 527 ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCK 578
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ L K+G + I++ K ML G + +Y T++ K + +EA L N++++ +
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVN-KG 526
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQR 242
S + ++S + NK+I++F ++++ +R D + S+ +
Sbjct: 527 ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCK 578
>gi|326519576|dbj|BAK00161.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 608
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 137 RGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKR 196
RG + ++V M +G T +D+++ AF K+ + DEA +++ +L T+TR + R
Sbjct: 451 RGMSCQALEVLYQMQHEGISPTAACWDSVISAFMKNEQIDEALEIFSEMLLTKTRP-NLR 509
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRP 228
+S +IS + M +++ + M E+ P
Sbjct: 510 TWSLLISGLSRNGMHCEVMNLCCKMHEVEPAP 541
>gi|302767038|ref|XP_002966939.1| hypothetical protein SELMODRAFT_30641 [Selaginella moellendorffii]
gi|300164930|gb|EFJ31538.1| hypothetical protein SELMODRAFT_30641 [Selaginella moellendorffii]
Length = 506
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 55/124 (44%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
+RG I++ K M G ++ + L K D A + ++ + S
Sbjct: 88 ERGNLRATIELLKDMAENGSTLSIQDLNGCLRGLCKAGNVDGALEFFREAKNSFSLRASV 147
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
+S +++ N + E+ +ME +G+ D+DT I + + G DK K+++++
Sbjct: 148 STYSILVAALTAAKRNNDVYEILREMESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVER 207
Query: 256 YLSK 259
+S+
Sbjct: 208 MISR 211
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L K G+ + M +KG + TY LL + + + +L+N +
Sbjct: 342 LCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNS-MEGNGIVA 400
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
+++ +I Y M ++ + +F M+E GV PD T + +AF R+G+
Sbjct: 401 DHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGR 452
>gi|255661174|gb|ACU25756.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 426
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+F RMI L+ + ++EVF +M LG PD + + + +A+ ++ + DK
Sbjct: 357 VFERMIHLFSKYKKYGNVVEVFDEMRGLGYFPDSNVIALVLNAYGKLHEFDK 408
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G + + MLSKG T TY +L+ + +R EA+ L+ IL Q S +
Sbjct: 416 GNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILD-QGVSPDVIM 474
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
F+ M+ + + + + +M+ V PDE T + R G+ ++ +++L +
Sbjct: 475 FNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 532
>gi|393229856|gb|EJD37471.1| WD40 repeat-like protein [Auricularia delicata TFB-10046 SS5]
Length = 576
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 93 NLVRIVSELPNEKHAVYGALDKWTA--WETEFPLIAAAKALRILRKRGQWLRVIQVAKWM 150
N VR V+ PN KH G+ D WT W T+ A+R+LR W+R + +
Sbjct: 442 NTVRSVAFSPNGKHLASGS-DDWTVRIWNTQ-----TGAAVRVLRGHTDWVRSVAFSP-- 493
Query: 151 LSKGQGATMGTYDTLLLAFDKDHRADEAESLWNM 184
G+ G+ D + +D D + A+ LW +
Sbjct: 494 --DGKRIATGSKDKTVRVWDFDLHREIAQGLWRL 525
>gi|242047208|ref|XP_002461350.1| hypothetical protein SORBIDRAFT_02g001400 [Sorghum bicolor]
gi|241924727|gb|EER97871.1| hypothetical protein SORBIDRAFT_02g001400 [Sorghum bicolor]
Length = 560
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 55/129 (42%)
Query: 129 KALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHT 188
K + +L + GQ R Q+ ML +G T G Y L+ A+ + D+A L N + +
Sbjct: 211 KLIVLLGRSGQPARAHQLFDEMLQQGCQPTPGLYTALIGAYCRSGLLDDALQLLNDMKGS 270
Query: 189 QTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+S +I + I ++ DM E + P+ T + S + + G+ D
Sbjct: 271 PLCQPDVYTYSTIIKACVDATRFDLIDVMYKDMAERSIAPNTVTQNIVLSGYGKAGRLDD 330
Query: 249 QKLVLKKYL 257
+ VL L
Sbjct: 331 MEKVLSDML 339
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
+ R+ + + + + M +G TY+ LL F K R EA + +
Sbjct: 271 ISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQE-MEANG 329
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD 247
S + ++ +IS Y + + +++ M G++PD T + S F++ G+DD
Sbjct: 330 FSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDD 386
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Query: 124 LIAAAKALRILRKRGQ-WLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLW 182
LI L + K G W V + + M S+G + TY+TL+ + +EA L+
Sbjct: 228 LITYNVVLNVYGKMGMPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLF 287
Query: 183 NMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQR 242
+ + + K ++ ++ ++ P + ++V +ME G P T + SA+ +
Sbjct: 288 QQ-MKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAK 346
Query: 243 VG 244
G
Sbjct: 347 GG 348
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
++G R + + KG + TY L+ K AE L N + ++ +I++
Sbjct: 341 RKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNE-MQSKGVNITQ 399
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQK 250
+F+ +I Y M ++ ++ ME+ G + D T IAS F R+ + D+ K
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAK 454
>gi|410110141|gb|AFV61150.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
turbinata]
Length = 441
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+F RMI L + + +IEVF M LG PD D + + +A+ ++ + DK
Sbjct: 364 VFERMIHLLSKYKKYSNVIEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDK 415
>gi|388512253|gb|AFK44188.1| unknown [Medicago truncatula]
Length = 376
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 58/131 (44%), Gaps = 9/131 (6%)
Query: 124 LIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWN 183
L++ ++ L ++G + + V + M G + + T++TLL R ++ E LW
Sbjct: 159 LVSYNTYIKALLEKGSFDSAVSVLEEMEKDGVESDLITFNTLLDGLYSKGRFEDGEKLWE 218
Query: 184 MI----LHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASA 239
+ + R+ + RL ++ + +E + +ME+ GV+PD + +
Sbjct: 219 KLGEKNVVPNIRTYNARLLGLAVA-----KRAGEAVEFYEEMEKKGVKPDLFSFNALIKG 273
Query: 240 FQRVGQDDKQK 250
F G D+ K
Sbjct: 274 FANEGNLDEAK 284
>gi|297833394|ref|XP_002884579.1| EMB2750 [Arabidopsis lyrata subsp. lyrata]
gi|297330419|gb|EFH60838.1| EMB2750 [Arabidopsis lyrata subsp. lyrata]
Length = 486
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%)
Query: 129 KALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHT 188
K L +L K GQ R ++ ML +G T+ Y LL A+ + + D+A S+ + +
Sbjct: 129 KLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDTMKGL 188
Query: 189 QTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+S ++ + + ++ +M+E + P+ T + S + RVG+ D+
Sbjct: 189 PQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQ 248
Query: 249 QKLVLKKYL 257
+ VL L
Sbjct: 249 MEKVLSDML 257
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 16/127 (12%)
Query: 124 LIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWN 183
L A ++ L I KRG+ Q+ +++ G ++ ++ L + K D+A L++
Sbjct: 162 LHACSQLLDI--KRGK-----QIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFD 214
Query: 184 MILHTQTRSISKRLFS--RMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQ 241
R ++K + S MIS Y + P ++F +M+ G+ PD+ T+ I SA+
Sbjct: 215 -------RMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYF 267
Query: 242 RVGQDDK 248
+ G D+
Sbjct: 268 QCGYIDE 274
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/136 (20%), Positives = 68/136 (50%), Gaps = 1/136 (0%)
Query: 124 LIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWN 183
++A + + K G+ ++ K M+ +G TY +L+ F K+++ D+A + +
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 184 MILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRV 243
+++ ++ + R F+ +I+ Y ++ + +E+F M GV D T + F +
Sbjct: 377 LMV-SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435
Query: 244 GQDDKQKLVLKKYLSK 259
G+ + K + ++ +S+
Sbjct: 436 GKLEVAKELFQEMVSR 451
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 64/137 (46%), Gaps = 2/137 (1%)
Query: 124 LIAAAKALRILRKRGQ-WLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLW 182
L+ L + K G+ W +++++ M S+G T T+L A ++ DEA +
Sbjct: 257 LVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFF 316
Query: 183 NMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQR 242
+ L ++ ++ ++ ++ + ++ + V ++MEE PD T + +A+ R
Sbjct: 317 SG-LKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVR 375
Query: 243 VGQDDKQKLVLKKYLSK 259
G ++ +V+ SK
Sbjct: 376 AGFHEEGAVVIDAMASK 392
>gi|410110099|gb|AFV61129.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
trifolia]
Length = 440
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+F RMI L + + ++EVF M LG PD D + + +A+ ++ + DK
Sbjct: 363 VFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAXVLNAYGKLQEFDK 414
>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
Length = 394
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 7/121 (5%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L K +W + Q+ + MLSKG + TY T++ + K R D+A SL + T RS
Sbjct: 94 LFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGT-GRSP 152
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTV--RRIASAFQRVGQDDKQKL 251
S L+S +I HD + E+F E+ +D + S + G+ D+ K
Sbjct: 153 SGSLYSTLIDGLCKHDRHEEARELF----EMAAGDVQDVIVYTSFISGLCKAGKLDEAKA 208
Query: 252 V 252
V
Sbjct: 209 V 209
>gi|255661134|gb|ACU25736.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
gi|255661138|gb|ACU25738.1| pentatricopeptide repeat-containing protein [Verbena halei]
gi|255661140|gb|ACU25739.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 426
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+F RMI L+ + ++EVF M LG PD + + I +A+ ++ + DK
Sbjct: 357 VFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDK 408
>gi|255661144|gb|ACU25741.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 426
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+F RMI L+ + ++EVF M LG PD + + I +A+ ++ + DK
Sbjct: 357 VFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDK 408
>gi|255661142|gb|ACU25740.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 426
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+F RMI L+ + ++EVF M LG PD + + I +A+ ++ + DK
Sbjct: 357 VFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDK 408
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 168 AFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVR 227
+ K R D+A+ +++ QT ++ MIS Y D P + + VF +M G++
Sbjct: 287 GYSKCGRLDDAQVIFD-----QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIK 341
Query: 228 PDEDTVRRIASAFQRVGQDDKQK 250
PD ++ + SA +G DK K
Sbjct: 342 PDVVSMFSVISACANLGILDKAK 364
>gi|86142428|ref|ZP_01060938.1| putative ATP-dependent RNA helicase [Leeuwenhoekiella blandensis
MED217]
gi|85831180|gb|EAQ49637.1| putative ATP-dependent RNA helicase [Leeuwenhoekiella blandensis
MED217]
Length = 442
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 20/186 (10%)
Query: 78 LWQKRDSAGSGQ-----KALNLVRIVSELPNEKHAVYGALDKWTAWETE--FPLIAAAKA 130
L Q D GSG+ KAL +V EL + K+T ++ F + A
Sbjct: 60 LQQIYDKVGSGKGKRKLKAL-IVTPTRELAIQIEDNVKEYSKYTGIQSTVIFGGVKQASQ 118
Query: 131 LRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQT 190
++ +RK L L K +GT + L+L DEA+ + +M
Sbjct: 119 VQAMRKGVDVLTATPGRLLDLVKQGFIDLGTIEYLVL--------DEADQMLDMGFIHDI 170
Query: 191 RSISKRLFSRMISLYDHHDMPNKIIE----VFADMEELGVRPDEDTVRRIASAFQRVGQD 246
+ I K + + SL+ MP +II+ + D E++ + P++ T R+ A V +
Sbjct: 171 KKILKLVPHKRQSLFFSATMPKEIIDLSKLILGDFEKVSIAPEKPTAERVDQAVYFVSKK 230
Query: 247 DKQKLV 252
+K KL+
Sbjct: 231 NKAKLL 236
>gi|357131803|ref|XP_003567523.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 577
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 201 MISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
++S Y HH +++EVF M L V+PD T + +A G DK
Sbjct: 398 LLSGYAHHGYGKEVVEVFEQMRRLNVQPDHTTFLLVLTACSHAGLVDK 445
>gi|255661132|gb|ACU25735.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 426
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+F RMI L+ + ++EVF M LG PD + + I +A+ ++ + DK
Sbjct: 357 VFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDK 408
>gi|255661130|gb|ACU25734.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 426
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+F RMI L+ + ++EVF M LG PD + + I +A+ ++ + DK
Sbjct: 357 VFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDK 408
>gi|224054128|ref|XP_002298105.1| predicted protein [Populus trichocarpa]
gi|222845363|gb|EEE82910.1| predicted protein [Populus trichocarpa]
Length = 401
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 64/141 (45%), Gaps = 13/141 (9%)
Query: 118 WETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADE 177
++ EF + + ++ L +RG + + M G + TY TL A+ K+++A+
Sbjct: 172 FDIEFDIFSVNIIVKALCERGVLDKSYLLMVEMEKSGVTPDVITYTTLTSAYYKNNKAEI 231
Query: 178 AESLWNMIL------HTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDED 231
LWN+++ + T ++ + + + +D V M+++G+ PDE
Sbjct: 232 GNGLWNLMVLKGCLPNLATFNVRIQYLVNIRRAWHAND-------VMRLMQKIGIVPDEV 284
Query: 232 TVRRIASAFQRVGQDDKQKLV 252
+ + F +VG + KLV
Sbjct: 285 SYNLVLKGFFQVGNLEMAKLV 305
>gi|225454795|ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Vitis vinifera]
Length = 1071
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/180 (18%), Positives = 81/180 (45%), Gaps = 5/180 (2%)
Query: 70 KVGKKEQ--HLWQKRDSAGSGQKALNLVRIVSELPNE-KH-AVYGALDKWTAWETEFPLI 125
K GK E+ HL+++ G +++ ++V L N KH + + E +
Sbjct: 721 KCGKAEEAYHLYEEVTGKGIELGVVSISKVVHALANYGKHQEAENVIRRSFEDGLELDTV 780
Query: 126 AAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMI 185
A + + G+ + M+S G ++ TY+T++ + + + D+A ++N
Sbjct: 781 AYNTFINAMLGAGRLHFANSIYDRMVSLGVAPSIQTYNTMISVYGRGRKLDKAVEMFNKA 840
Query: 186 LHTQTR-SISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
+ S+ ++ ++ +IS Y ++ +F +M+E G++P + + + + + G
Sbjct: 841 RCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVSYNIMINVYATAG 900
>gi|168063537|ref|XP_001783727.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664733|gb|EDQ51441.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 445
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 42/96 (43%)
Query: 150 MLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHD 209
M +G +Y+TL+ + D + +EA L + + R F+ +I + H
Sbjct: 86 MKERGCPLITSSYNTLIKGYGLDGQPEEAMKLLQEMAKDVNSKPNDRTFNMLIKAWAHDK 145
Query: 210 MPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
P K V + M GV PD + +A F ++G+
Sbjct: 146 NPEKARNVISMMRAAGVGPDVVSYNTLAQLFAKLGK 181
>gi|297737325|emb|CBI26526.3| unnamed protein product [Vitis vinifera]
Length = 1005
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 34/180 (18%), Positives = 81/180 (45%), Gaps = 5/180 (2%)
Query: 70 KVGKKEQ--HLWQKRDSAGSGQKALNLVRIVSELPNE-KH-AVYGALDKWTAWETEFPLI 125
K GK E+ HL+++ G +++ ++V L N KH + + E +
Sbjct: 655 KCGKAEEAYHLYEEVTGKGIELGVVSISKVVHALANYGKHQEAENVIRRSFEDGLELDTV 714
Query: 126 AAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMI 185
A + + G+ + M+S G ++ TY+T++ + + + D+A ++N
Sbjct: 715 AYNTFINAMLGAGRLHFANSIYDRMVSLGVAPSIQTYNTMISVYGRGRKLDKAVEMFNKA 774
Query: 186 LHTQTR-SISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
+ S+ ++ ++ +IS Y ++ +F +M+E G++P + + + + + G
Sbjct: 775 RCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVSYNIMINVYATAG 834
>gi|125602283|gb|EAZ41608.1| hypothetical protein OsJ_26140 [Oryza sativa Japonica Group]
Length = 524
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 168 AFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVR 227
AF K D+AE +W T+ ++++ F+ ++S+Y H + +K VF +M G +
Sbjct: 332 AFGKVGSIDQAEEIWGKFESTRKPKLTEQ-FNSILSVYCRHGLVDKASAVFKEMRANGCQ 390
Query: 228 PDEDTVRRIASAFQRVG 244
P+ T R + + G
Sbjct: 391 PNAITYRHLTLGCLKAG 407
>gi|224077490|ref|XP_002305269.1| predicted protein [Populus trichocarpa]
gi|222848233|gb|EEE85780.1| predicted protein [Populus trichocarpa]
Length = 97
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 221 MEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
MEELG+RP V + S FQR+G DK + + KK
Sbjct: 1 MEELGLRPSVSIVNMVGSVFQRLGMTDKNEKLKKKI 36
>gi|15228936|ref|NP_188942.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273922|sp|Q9LS88.1|PP250_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g23020
gi|9294191|dbj|BAB02093.1| unnamed protein product [Arabidopsis thaliana]
gi|332643185|gb|AEE76706.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 842
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Query: 133 ILRKRGQWLRVIQVAKWMLSKG-QGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTR 191
IL+++ W R +++ +W SKG + Y+ +L K + +SLW+ ++ +
Sbjct: 160 ILKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIK 219
Query: 192 SISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKL 251
I+ + +I +Y + + M ++G++PDE T + +++ + K +
Sbjct: 220 PINST-YGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEE 278
Query: 252 VLKK 255
KK
Sbjct: 279 FFKK 282
>gi|242051158|ref|XP_002463323.1| hypothetical protein SORBIDRAFT_02g041810 [Sorghum bicolor]
gi|241926700|gb|EER99844.1| hypothetical protein SORBIDRAFT_02g041810 [Sorghum bicolor]
Length = 576
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRL 197
G+W V +W+ S G L+ ++K +EA +++ I + +
Sbjct: 205 GKW-----VEEWVRSAGMEVDSLIGSALVGMYEKCGEMEEARRVFDGISNKDVVA----- 254
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
++ MI+ Y + M N+ I +F M E G+RPD+ T+ + S+ VG
Sbjct: 255 WNAMITGYAQNGMSNEAIALFHSMREAGLRPDKITLVGVLSSCAAVG 301
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 64/153 (41%), Gaps = 30/153 (19%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDK---------------DHRADEAESLW 182
G W + ++V M+S G + T+ ++L A + + R + E L
Sbjct: 389 GNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLL 448
Query: 183 NMILHTQTRSISK----RLFSR-----------MISLYDHHDMPNKIIEVFADMEELGVR 227
+ +L ++ ++ R+F+ MIS Y H P + + F +M++ G++
Sbjct: 449 SALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLK 508
Query: 228 PDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKW 260
PD T+ + SA G D+ + SK+
Sbjct: 509 PDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKY 541
>gi|410110113|gb|AFV61136.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
filifolia]
Length = 439
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+F RMI L + + ++EVF M LG PD D + + +A+ ++ + DK
Sbjct: 363 VFERMIHLLSKYKKXSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDK 414
>gi|240255936|ref|NP_193372.6| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|374095491|sp|Q8GWE0.3|PP314_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16390, chloroplastic; AltName: Full=Chloroplastic
RNA-binding protein P67; Flags: Precursor
gi|332658341|gb|AEE83741.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 702
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 162 YDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADM 221
Y+ + F K +++E L++ +L + F+ +IS + +P + +E F M
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKP-DNATFTTIISCARQNGVPKRAVEWFEKM 236
Query: 222 EELGVRPDEDTVRRIASAFQRVGQDD 247
G PD T+ + A+ R G D
Sbjct: 237 SSFGCEPDNVTMAAMIDAYGRAGNVD 262
>gi|284434715|gb|ADB85413.1| putative endonuclease [Phyllostachys edulis]
Length = 787
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/115 (20%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 142 RVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRM 201
R+I + K M G + +++ AF K+ +E E+ W+ +L + ++ RM
Sbjct: 315 RIIALRKEMKRAGFDECVDVLVSVMRAFSKEGNVEETEATWHKVLQSGFEPPAQAYVCRM 374
Query: 202 ISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
Y P K +++F +M+E + P+ + +I + D + ++ ++
Sbjct: 375 -EAYARTGKPMKSLDIFKEMKEQNIPPNVASYHKIIEIMANAQEIDITEQLMDEF 428
>gi|410110117|gb|AFV61138.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
hermannioides]
Length = 382
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+F RMI L + + ++EVF M LG PD D + + +A+ ++ + DK
Sbjct: 318 VFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDK 369
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 5/126 (3%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K G + + V + M G T++ L+ AF K R D S+W + Q ++ S
Sbjct: 101 KAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVD---SVWKLFEEMQNQNCSP 157
Query: 196 RL--FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
+ +S +I K ++VF DM+ G RP+ T + + G DK +
Sbjct: 158 NVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLF 217
Query: 254 KKYLSK 259
++ S+
Sbjct: 218 EEMTSE 223
>gi|26452823|dbj|BAC43491.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 702
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 162 YDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADM 221
Y+ + F K +++E L++ +L + F+ +IS + +P + +E F M
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKP-DNATFTTIISCARQNGVPKRAVEWFEKM 236
Query: 222 EELGVRPDEDTVRRIASAFQRVGQDD 247
G PD T+ + A+ R G D
Sbjct: 237 SSFGCEPDNVTMAAMIDAYGRAGNVD 262
>gi|119384590|ref|YP_915646.1| DNA polymerase I [Paracoccus denitrificans PD1222]
gi|119374357|gb|ABL69950.1| DNA polymerase I [Paracoccus denitrificans PD1222]
Length = 940
Score = 37.7 bits (86), Expect = 5.6, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 154 GQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNK 213
G G + + + + ++ A++AE W + H + K + + + Y+ + P
Sbjct: 489 GSGKSQINFSQVAIDKASEYAAEDAEVTWRLWRHLR----PKLAPNHVTTAYERLERP-- 542
Query: 214 IIEVFADMEELGVRPDEDTVRRIASAFQR 242
+I V ADME G+R D + ++R+++AF +
Sbjct: 543 MIAVLADMEMAGIRIDSEHLKRMSNAFAQ 571
>gi|356509555|ref|XP_003523513.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 542
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 201 MISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
MIS H + I++F DME GV+PDE TV + +A + G
Sbjct: 240 MISGLASHGLCKDAIDMFVDMESSGVKPDERTVTTVLTACRNAG 283
>gi|115465970|ref|NP_001056584.1| Os06g0111300 [Oryza sativa Japonica Group]
gi|113594624|dbj|BAF18498.1| Os06g0111300 [Oryza sativa Japonica Group]
Length = 978
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/122 (17%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L K+G+ + + M+S G +M T++ ++ + + + ++A +++ I
Sbjct: 691 LTKQGKLYSAVSIYDRMISSGIPRSMQTFNIMISVYGQGGKLEKAVEMFSAA-QELGLPI 749
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
++ ++ M+S Y ++ +F+ M+E G+RP + + + +A+ G ++ +++
Sbjct: 750 DEKTYTNMLSFYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIF 809
Query: 254 KK 255
++
Sbjct: 810 QE 811
>gi|9755842|emb|CAC01928.1| 67kD chloroplastic RNA-binding protein, P67 [Arabidopsis thaliana]
Length = 702
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 162 YDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADM 221
Y+ + F K +++E L++ +L + F+ +IS + +P + +E F M
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKP-DNATFTTIISCARQNGVPKRAVEWFEKM 236
Query: 222 EELGVRPDEDTVRRIASAFQRVGQDD 247
G PD T+ + A+ R G D
Sbjct: 237 SSFGCEPDNVTMAAMIDAYGRAGNVD 262
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
L K G L V + M+ KG + TY+ L+ + + DEA+ L+N+++ + +
Sbjct: 197 LSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVR-KGCAP 255
Query: 194 SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ-DDKQKLV 252
S R ++ +I + ++ + A+M + PD T + F + G+ D QKL+
Sbjct: 256 SVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLL 315
>gi|356505262|ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Glycine max]
Length = 566
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 199 SRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLS 258
S +IS Y + +PN+ + VF +ME + V+PDE + + SA ++G + + V Y+S
Sbjct: 291 SALISGYVQNGLPNQALRVFLEMELMNVKPDEFILVSLMSASAQLGHLELAQWV-DSYVS 349
Query: 259 K 259
K
Sbjct: 350 K 350
>gi|410110115|gb|AFV61137.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
hederifolia]
Length = 364
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+F RMI L + + ++EVF M LG PD D + + +A+ ++ + DK
Sbjct: 300 VFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDK 351
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 8/128 (6%)
Query: 134 LRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSI 193
+RK G+ L + + K S+G ++ TY+ L+ F K A ++ + R I
Sbjct: 351 VRKLGKALSLCRDLK---SRGLSPSLVTYNILVSGFCKKGDTSGA---GKVVKEMEERGI 404
Query: 194 --SKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKL 251
SK ++ +I + D K I++ + MEELG+ PD T + F G+ ++
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASR 464
Query: 252 VLKKYLSK 259
+ K + K
Sbjct: 465 LFKSMVEK 472
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K+GQ +Q+ + M S G+ TY L+ + K ++ EA + + +L+T + K
Sbjct: 443 KQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLK 502
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPD 229
+S +I Y P + E F M G+RPD
Sbjct: 503 T-YSALICGYAKAGKPVEAEETFDCMLRSGIRPD 535
>gi|410110111|gb|AFV61135.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
duartei]
Length = 381
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+F RMI L + + ++EVF M LG PD D + + +A+ ++ + DK
Sbjct: 317 VFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDK 368
>gi|410110095|gb|AFV61127.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
montevidensis]
Length = 418
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+F RMI L + + ++EVF M LG PD D + + +A+ ++ + DK
Sbjct: 347 VFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDK 398
>gi|115473337|ref|NP_001060267.1| Os07g0615000 [Oryza sativa Japonica Group]
gi|113611803|dbj|BAF22181.1| Os07g0615000 [Oryza sativa Japonica Group]
Length = 259
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Query: 150 MLSKGQGATMGTYDTLLLAFDKDHRADEAESLW-NMILHTQTRSISKRLFSRMISLYDHH 208
ML +G + TY +L+ D R E L NMIL T + +++ +I+ Y
Sbjct: 86 MLDEGTMPNIFTYTSLINGLCHDDRLPEMTPLLKNMILEGLTPD--RIMYTSLIACYCKR 143
Query: 209 DMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSK 259
K +E+F +M+ G+ PD + + +V D +L++++ +K
Sbjct: 144 SNMKKAMEIFREMKNGGISPDTFVYTCLIGGYTKVRAMDFAELLMEEMETK 194
>gi|422292736|gb|EKU20038.1| hypothetical protein NGA_2025410 [Nannochloropsis gaditana CCMP526]
gi|422295019|gb|EKU22318.1| hypothetical protein NGA_2025420 [Nannochloropsis gaditana CCMP526]
Length = 527
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 49/109 (44%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
KR +W + +Q+ + M +KG TY LL ++ + A+SLW + +
Sbjct: 203 KRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNL 262
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
L+S + ++ + + +F +M V+P+ T + AF R G
Sbjct: 263 ELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAG 311
>gi|410110085|gb|AFV61122.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
fucata]
Length = 382
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+F RMI L + + ++EVF M LG PD D + + +A+ ++ + DK
Sbjct: 318 VFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDK 369
>gi|410110105|gb|AFV61132.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
aristata]
Length = 382
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+F RMI L + + ++EVF M LG PD D + + +A+ ++ + DK
Sbjct: 318 VFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDK 369
>gi|410110089|gb|AFV61124.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
macropoda]
Length = 427
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+F RMI L + + ++EVF M LG PD D + + +A+ ++ + DK
Sbjct: 364 VFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDK 415
>gi|297804554|ref|XP_002870161.1| hypothetical protein ARALYDRAFT_915114 [Arabidopsis lyrata subsp.
lyrata]
gi|297315997|gb|EFH46420.1| hypothetical protein ARALYDRAFT_915114 [Arabidopsis lyrata subsp.
lyrata]
Length = 702
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 162 YDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADM 221
Y+ L F K +++E L++ +L + F+ +IS +P + +E F M
Sbjct: 178 YNVTLKVFRKSKNLEKSEKLFDEMLERGVKP-DNATFTTIISCARQSGVPKRAVEWFEKM 236
Query: 222 EELGVRPDEDTVRRIASAFQRVGQ 245
G PD T+ + A+ R G
Sbjct: 237 SSFGCEPDNVTLAAMIDAYGRAGN 260
>gi|15230719|ref|NP_187294.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207273|sp|Q9SQU6.1|PP216_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g06430, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2750; Flags: Precursor
gi|6437546|gb|AAF08573.1|AC011623_6 unknown protein [Arabidopsis thaliana]
gi|20466300|gb|AAM20467.1| unknown protein [Arabidopsis thaliana]
gi|30387593|gb|AAP31962.1| At3g06430 [Arabidopsis thaliana]
gi|332640870|gb|AEE74391.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 486
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%)
Query: 129 KALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHT 188
K L +L K GQ R ++ ML +G T+ Y LL A+ + + D+A S+ + +
Sbjct: 129 KLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSF 188
Query: 189 QTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+S ++ + + ++ +M+E + P+ T + S + RVG+ D+
Sbjct: 189 PQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQ 248
Query: 249 QKLVLKKYL 257
+ VL L
Sbjct: 249 MEKVLSDML 257
>gi|387192495|gb|AFJ68660.1| hypothetical protein NGATSA_2025410, partial [Nannochloropsis
gaditana CCMP526]
Length = 527
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 49/109 (44%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
KR +W + +Q+ + M +KG TY LL ++ + A+SLW + +
Sbjct: 203 KRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNL 262
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
L+S + ++ + + +F +M V+P+ T + AF R G
Sbjct: 263 ELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAG 311
>gi|255661184|gb|ACU25761.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 426
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+F RMI L + + ++EVF M LG PD D + + +A+ ++ + DK
Sbjct: 357 VFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDK 408
>gi|2191182|gb|AAB61067.1| similar to N. tabacum membrane-associated salt-inducible protein
(PID:g473874) [Arabidopsis thaliana]
Length = 597
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 64/153 (41%), Gaps = 30/153 (19%)
Query: 138 GQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDK---------------DHRADEAESLW 182
G W + ++V M+S G + T+ ++L A + + R + E L
Sbjct: 295 GNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLL 354
Query: 183 NMILHTQTRSISK----RLFSR-----------MISLYDHHDMPNKIIEVFADMEELGVR 227
+ +L ++ ++ R+F+ MIS Y H P + + F +M++ G++
Sbjct: 355 SALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLK 414
Query: 228 PDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKW 260
PD T+ + SA G D+ + SK+
Sbjct: 415 PDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKY 447
>gi|410110093|gb|AFV61126.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
microcephala]
Length = 440
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+F RMI L + + ++EVF M LG PD D + + +A+ ++ + DK
Sbjct: 363 VFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDK 414
>gi|224069810|ref|XP_002303045.1| predicted protein [Populus trichocarpa]
gi|222844771|gb|EEE82318.1| predicted protein [Populus trichocarpa]
Length = 388
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%)
Query: 128 AKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILH 187
K + +L K Q + Q+ + M+ +G T +Y LL A+ + D+A S+ + +
Sbjct: 34 VKLIVMLGKCKQPDKAHQLFQAMIDEGCAVTHESYTALLSAYGRSGLFDKAFSIMEEMKN 93
Query: 188 TQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDD 247
T +S +I +K+ + +DME LG+RP+ T + A+ +
Sbjct: 94 TPDCRPDVHTYSILIKSCLQVFAFDKVQVLLSDMESLGIRPNTVTYNTVIDAYGKAKMFA 153
Query: 248 KQKLVLKKYLSK 259
+ + L + LS+
Sbjct: 154 EMEATLMEMLSQ 165
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
+ G + + + + M + G A++ TY+ LL + + DEAE L L Q
Sbjct: 521 ESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELI-YTLRNQGLRPDV 579
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
++ +IS + +K +E+ +M + G+RP T + SA G+ + + ++
Sbjct: 580 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQ 639
Query: 256 YLSK 259
L K
Sbjct: 640 MLHK 643
>gi|242082341|ref|XP_002445939.1| hypothetical protein SORBIDRAFT_07g028400 [Sorghum bicolor]
gi|241942289|gb|EES15434.1| hypothetical protein SORBIDRAFT_07g028400 [Sorghum bicolor]
Length = 465
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 5/138 (3%)
Query: 118 WETEFPLIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADE 177
+ E I+ ++I G +V + M G + TY TL+ AF K + +
Sbjct: 232 YGVELDDISCNTVVKIYCDMGDLRAAYRVMQGMEGAGVQPDVVTYTTLMAAFYKCGQREV 291
Query: 178 AESLWNMILHTQTRSISKRL--FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRR 235
+ LWN++ + R L ++ I + + + E+ M +G++PDE T
Sbjct: 292 GDGLWNLM---RLRGCEPTLATYNVRIQFLINRERGWQANELVRKMYAVGIKPDEITYNL 348
Query: 236 IASAFQRVGQDDKQKLVL 253
I F +G+ + K V
Sbjct: 349 IIKGFFMMGEHEMAKTVF 366
>gi|240254375|ref|NP_001031285.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332197698|gb|AEE35819.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 693
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRV 243
F+ +++ YD D P + + V A M+EL +RPD T + S F V
Sbjct: 438 FNNLLAAYDSLDQPERAVRVLARMKELKLRPDMRTYELLFSLFGNV 483
>gi|68611229|emb|CAE03043.3| OSJNBa0084A10.18 [Oryza sativa Japonica Group]
Length = 729
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 146 VAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLY 205
V W + G +L+ + K EA ++ +IL T + ++ MI+ Y
Sbjct: 397 VHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVT-----WNAMIATY 451
Query: 206 DHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
+H + ++ ++VF M + G RPD T I SA G
Sbjct: 452 AYHGLADEALKVFDMMTKAGFRPDHATFLSILSACAHKG 490
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 5/124 (4%)
Query: 124 LIAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWN 183
+I + A+ RK GQW + + K M + G + TY T++ D + + E +
Sbjct: 256 VIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVI---DACAKRGQWEPAFR 312
Query: 184 MILHTQTRSISKRL--FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQ 241
+++ T+ + + +S +I + + + +M+E GV PD T SA
Sbjct: 313 LLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACA 372
Query: 242 RVGQ 245
+ GQ
Sbjct: 373 KKGQ 376
>gi|357137172|ref|XP_003570175.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15820-like [Brachypodium distachyon]
Length = 787
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/115 (19%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 142 RVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRM 201
R+I + K M G ++ +++ AF K+ R +E E W+ ++ + ++ +M
Sbjct: 315 RIIALRKEMKQAGFDESLDVLVSVMRAFSKEGRVEETEETWHKVIQRGSERPAQAYVCQM 374
Query: 202 ISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKY 256
Y P K +++F +M+ + P+ T +I + D + ++ ++
Sbjct: 375 -EAYARAGEPMKSLDIFKEMKRQSISPNVATYHKIIEIMANAKEVDLAEQLMNEF 428
>gi|168045490|ref|XP_001775210.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673423|gb|EDQ59946.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 404
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K G + + ++ M+ G TY L+ A+ K + AE+ + + T S+
Sbjct: 211 KGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYGKAGLWENAENTFKGMKGTNV-SVDV 269
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
++ MI Y + K E+F M+ G+RP++ T + A+ + G ++ + V
Sbjct: 270 MAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLSLMEAYGKAGLPEESRNVF 327
>gi|225456802|ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Vitis vinifera]
gi|147821419|emb|CAN76897.1| hypothetical protein VITISV_010606 [Vitis vinifera]
Length = 692
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 150 MLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHD 209
M KG + Y+TL+ A+ K +R +EAE L+ + S ++ ++ Y
Sbjct: 339 MEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSA-TYNILMDAYSRRM 397
Query: 210 MPNKIIEVFADMEELGVRPDEDTVRRIASAFQR 242
P I + +M+++G+ P+ + + SA+ R
Sbjct: 398 QPEIIENLLLEMQDMGLEPNVKSYTCLISAYGR 430
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Query: 154 GQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNK 213
G T+ TYD ++ F + R D A +W+ + + LFS +I+ H
Sbjct: 431 GCEPTLSTYDIMIRMFCNEERVDMAIQIWDE-MKAKGVLPGMHLFSTLINSLCHEHKLED 489
Query: 214 IIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
F +M ++G+RP + A G+ D L+ +K
Sbjct: 490 ACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEK 531
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Query: 154 GQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNK 213
G T+ TYD ++ F + R D A +W+ + + LFS +I+ H
Sbjct: 431 GCEPTLSTYDIMIRMFCNEERVDMAIQIWDE-MKAKGVLPGMHLFSTLINSLCHEHKLED 489
Query: 214 IIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKK 255
F +M ++G+RP + A G+ D L+ +K
Sbjct: 490 ACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEK 531
>gi|334183937|ref|NP_001185409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332197699|gb|AEE35820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 801
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRV 243
F+ +++ YD D P + + V A M+EL +RPD T + S F V
Sbjct: 434 FNNLLAAYDSLDQPERAVRVLARMKELKLRPDMRTYELLFSLFGNV 479
>gi|2244996|emb|CAB10416.1| salt-inducible protein homolog [Arabidopsis thaliana]
gi|7268388|emb|CAB78681.1| salt-inducible protein homolog [Arabidopsis thaliana]
Length = 777
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 162 YDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADM 221
Y+ + F K +++E L++ +L + F+ +IS + +P + +E F M
Sbjct: 253 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKP-DNATFTTIISCARQNGVPKRAVEWFEKM 311
Query: 222 EELGVRPDEDTVRRIASAFQRVGQDD 247
G PD T+ + A+ R G D
Sbjct: 312 SSFGCEPDNVTMAAMIDAYGRAGNVD 337
>gi|297733647|emb|CBI14894.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 150 MLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHD 209
M KG + Y+TL+ A+ K +R +EAE L+ + S ++ ++ Y
Sbjct: 339 MEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSA-TYNILMDAYSRRM 397
Query: 210 MPNKIIEVFADMEELGVRPDEDTVRRIASAFQR 242
P I + +M+++G+ P+ + + SA+ R
Sbjct: 398 QPEIIENLLLEMQDMGLEPNVKSYTCLISAYGR 430
>gi|42563256|ref|NP_177755.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806405|sp|Q9SGQ6.2|PP126_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g76280
gi|332197697|gb|AEE35818.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 773
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRV 243
F+ +++ YD D P + + V A M+EL +RPD T + S F V
Sbjct: 406 FNNLLAAYDSLDQPERAVRVLARMKELKLRPDMRTYELLFSLFGNV 451
>gi|356550382|ref|XP_003543566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 572
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 201 MISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
MIS H + I++F DME GV+PDE TV + +A + G
Sbjct: 270 MISGLASHGLCKDAIDMFVDMESSGVKPDERTVTAVLTACRNAG 313
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K G + +++ + M +G AT+ TY +L+ A K + E + L++ + R
Sbjct: 339 KEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP-DL 397
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ-DDKQKLV 252
L++ +I+ + ++ E+ +ME+ + PD+ T + +G+ D+ +KL+
Sbjct: 398 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 455
>gi|357125122|ref|XP_003564244.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Brachypodium distachyon]
Length = 502
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%)
Query: 129 KALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHT 188
K + +L K Q + ++ + M+ +G + +Y L+ A+ + D A SL + + T
Sbjct: 156 KLITMLGKCKQPGKAHELFQAMVDEGCAPNLESYTALVSAYSRSGSFDRAFSLLDRMKAT 215
Query: 189 QTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDK 248
+ +S +I H +K+ ++ ADM G+RP+ T + A+ + G+ +
Sbjct: 216 PGCRPDVQTYSILIKSCLHAYDFDKVKDLLADMACGGIRPNTVTYNTLVDAYGKAGRFAE 275
Query: 249 QKLVLKKYLSK 259
+ L + LS+
Sbjct: 276 MESTLLEMLSE 286
>gi|6554490|gb|AAF16672.1|AC012394_21 hypothetical protein; 84465-87513 [Arabidopsis thaliana]
Length = 558
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
F+ +++ YD D P + + V A M+EL +RPD T + S F V
Sbjct: 177 FNNLLAAYDSLDQPERAVRVLARMKELKLRPDMRTYELLFSLFGNVN 223
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
++G + + ML +G + TY+T+L K EA+ L+N R++
Sbjct: 422 RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN---EMTERALFP 478
Query: 196 RLFSRMISLYDHHDMPN--KIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
++ I + H + N +E+F M+E +R D T + F +VG D K +
Sbjct: 479 DSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIW 538
Query: 254 KKYLSK 259
+SK
Sbjct: 539 ADMVSK 544
>gi|225430810|ref|XP_002271426.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Vitis vinifera]
Length = 414
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Query: 142 RVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRM 201
+ I + K M KG T T+ T+L A K ++D AE +W+ + + M
Sbjct: 195 KAISMLKEMEEKGVEITAVTFTTILDALYKQGQSDRAEKVWHEMAKKGCLDVGAYNVKIM 254
Query: 202 ISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLV 252
+ H P + + +M G++PD + + +++ + G D+ K V
Sbjct: 255 FA---HGGDPENVKALIDEMSNAGLKPDTISYNYLMTSYCKSGMVDEAKKV 302
>gi|125548358|gb|EAY94180.1| hypothetical protein OsI_15952 [Oryza sativa Indica Group]
Length = 655
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 146 VAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLY 205
V W + G +L+ + K EA ++ +IL T + ++ MI+ Y
Sbjct: 397 VHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVT-----WNAMIATY 451
Query: 206 DHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
+H + ++ ++VF M + G RPD T I SA G
Sbjct: 452 AYHGLADEALKVFDMMTKAGFRPDHATFLSILSACAHKG 490
>gi|116310106|emb|CAH67125.1| H0315E07.3 [Oryza sativa Indica Group]
gi|222628896|gb|EEE61028.1| hypothetical protein OsJ_14863 [Oryza sativa Japonica Group]
Length = 655
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 146 VAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLY 205
V W + G +L+ + K EA ++ +IL T + ++ MI+ Y
Sbjct: 397 VHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVT-----WNAMIATY 451
Query: 206 DHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
+H + ++ ++VF M + G RPD T I SA G
Sbjct: 452 AYHGLADEALKVFDMMTKAGFRPDHATFLSILSACAHKG 490
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K G + +++ + M +G AT+ TY L+ A K + E + L++ + R
Sbjct: 673 KEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP-DL 731
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ-DDKQKLV 252
L++ +I+ + ++ E+ +ME+ + PD+ T + +G+ D+ +KL+
Sbjct: 732 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 789
>gi|297799892|ref|XP_002867830.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313666|gb|EFH44089.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 66/164 (40%), Gaps = 2/164 (1%)
Query: 90 KALNLVRIVSELPNEKHAVYGALDKWTAWETEFPLIAAAKALRILRKRGQWLRVIQVAKW 149
K L +S L + K +VY L W + + + + LR+R ++L ++V+KW
Sbjct: 23 KKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKW 82
Query: 150 MLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHD 209
M G T + L D R + + + + +++ + +++ Y
Sbjct: 83 MNETGVCVFSPTEHAVHL--DLIGRVYGFVTAEEYFENLKEQYKNEKTYGALLNCYVRQQ 140
Query: 210 MPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
K + F M+E+G T I + +GQ +K VL
Sbjct: 141 NVEKSLLHFQKMKEMGFVSSSLTYNNIMCLYTNIGQHEKVPGVL 184
>gi|297735184|emb|CBI17546.3| unnamed protein product [Vitis vinifera]
Length = 371
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Query: 142 RVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRM 201
+ I + K M KG T T+ T+L A K ++D AE +W+ + + M
Sbjct: 152 KAISMLKEMEEKGVEITAVTFTTILDALYKQGQSDRAEKVWHEMAKKGCLDVGAYNVKIM 211
Query: 202 ISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLV 252
+ H P + + +M G++PD + + +++ + G D+ K V
Sbjct: 212 FA---HGGDPENVKALIDEMSNAGLKPDTISYNYLMTSYCKSGMVDEAKKV 259
>gi|449436321|ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
gi|449514880|ref|XP_004164505.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
Length = 477
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 46/93 (49%)
Query: 161 TYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFAD 220
TY+T++ F K ++ ESL ++ + + F+ I Y + + K+ + + +
Sbjct: 235 TYNTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKMEKWYKE 294
Query: 221 MEELGVRPDEDTVRRIASAFQRVGQDDKQKLVL 253
+ +G+ PD T + S++ + G DK K VL
Sbjct: 295 FQLMGIEPDIWTYNSMISSYGKAGMYDKMKSVL 327
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 169 FDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGVRP 228
FD+ + D A WN+IL+ RS S + +D D + + +F DM+ +G+RP
Sbjct: 310 FDRINEPDLAT--WNVILNAYARSSSY---HSYSNSFDDADFSLESLYLFRDMQVIGIRP 364
Query: 229 DEDTVRRIASAFQRVG 244
+E T+ + SA +G
Sbjct: 365 NEVTIVALISACSNLG 380
>gi|6573717|gb|AAF17637.1|AC009978_13 T23E18.21 [Arabidopsis thaliana]
Length = 800
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 198 FSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVG 244
F+ +++ YD D P + + V A M+EL +RPD T + S F V
Sbjct: 390 FNNLLAAYDSLDQPERAVRVLARMKELKLRPDMRTYELLFSLFGNVN 436
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K G + +++ + M +G AT+ TY +L+ A K + E + L++ + R
Sbjct: 226 KEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP-DL 284
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ-DDKQKLV 252
L++ +I+ + ++ E+ +ME+ + PD+ T + +G+ D+ +KL+
Sbjct: 285 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 342
>gi|147840633|emb|CAN68320.1| hypothetical protein VITISV_032192 [Vitis vinifera]
Length = 416
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Query: 142 RVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRM 201
+ I + K M KG T T+ T+L A K ++D AE +W+ + + M
Sbjct: 197 KAISMLKEMEEKGVEITAVTFTTILDALYKQGQSDRAEKVWHEMAKKGCLDVGAYNVKIM 256
Query: 202 ISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKLV 252
+ H P + + +M G++PD + + +++ + G D+ K V
Sbjct: 257 FA---HGGDPENVKALIDEMSNAGLKPDTISYNYLMTSYCKSGMMDEAKKV 304
>gi|384247929|gb|EIE21414.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 448
Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K G W +QV + +G + TY+T+L A ++ + + A ++ +L + +
Sbjct: 155 KMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQPEHALRVYERMLADGAQPTAT 214
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ 245
++ +IS Y + + +F DM G + T + SA ++ G+
Sbjct: 215 T-YTALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLISACEKAGR 263
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 165 LLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEEL 224
LL + K R D A ++N + +Q S ++ MIS Y H + K +E+F +M+
Sbjct: 721 LLDMYSKCGRIDYASKVFNSM--SQKNEFS---WNSMISGYARHGLGEKALEIFEEMQRN 775
Query: 225 GVRPDEDTVRRIASAFQRVGQDDK 248
G PD T + SA G D+
Sbjct: 776 GACPDHVTFVSVLSACSHAGLVDR 799
>gi|407768162|ref|ZP_11115541.1| DNA polymerase I [Thalassospira xiamenensis M-5 = DSM 17429]
gi|407288875|gb|EKF14352.1| DNA polymerase I [Thalassospira xiamenensis M-5 = DSM 17429]
Length = 941
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 154 GQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISKRLFSR-MISLYDHHDMPN 212
G G T T+D + L D+ A++A+ + LH R + R+ M S+Y+ D P
Sbjct: 491 GSGKTQITFDQVPLDKALDYAAEDAD--ITLRLH---RLLKPRIAQEHMASVYETLDRP- 544
Query: 213 KIIEVFADMEELGVRPDEDTVRRIASAFQR 242
++ V A ME LG+R D D ++ +++ F +
Sbjct: 545 -LVPVLAKMESLGIRIDADKLKTLSNDFAK 573
>gi|356567152|ref|XP_003551785.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29290-like [Glycine max]
Length = 749
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 68/162 (41%), Gaps = 4/162 (2%)
Query: 69 VKVGKKEQHLWQKRDSAGSG----QKALNLVRIVSELPNEKHAVYGALDKWTAWETEFPL 124
V+ + + L+ R+ +G LN++ V + A +K E + L
Sbjct: 470 VRFDQSDLALYAYREMVQNGYEPDNNTLNVIISVCAKEGKWDAALSVFNKMLKVELKPNL 529
Query: 125 IAAAKALRILRKRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNM 184
+A + L + G+ +V QV M S T++ LL + +K R +A L+ M
Sbjct: 530 VACNALINSLGRAGELKQVFQVYNTMKSLDLKPDAYTFNALLSSLNKADRHHKALELFEM 589
Query: 185 ILHTQTRSISKRLFSRMISLYDHHDMPNKIIEVFADMEELGV 226
I QT + L++ ++ + ++ IE+ ME G+
Sbjct: 590 IERDQTSQFNVHLYNTVLMSCSKLRLWDRAIEILWQMEASGL 631
>gi|347954486|gb|AEP33743.1| chlororespiratory reduction 21, partial [Lobularia maritima]
Length = 734
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 197 LFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQDDKQKL 251
L+ MIS Y + + + ++ ++EE+G+ PD+ T+ + SA + G D KQ +
Sbjct: 598 LYGAMISAYALYGKLKEAVTLYRNLEEIGIEPDDKTITSLLSACKNAG-DTKQAI 651
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 136 KRGQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDKDHRADEAESLWNMILHTQTRSISK 195
K G + +++ + M +G AT+ TY L+ A K + E + L++ + R
Sbjct: 668 KEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP-DL 726
Query: 196 RLFSRMISLYDHHDMPNKIIEVFADMEELGVRPDEDTVRRIASAFQRVGQ-DDKQKLV 252
L++ +I+ + ++ E+ +ME+ + PD+ T + +G+ D+ +KL+
Sbjct: 727 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 784
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.131 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,489,867,730
Number of Sequences: 23463169
Number of extensions: 171285128
Number of successful extensions: 454603
Number of sequences better than 100.0: 653
Number of HSP's better than 100.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 444
Number of HSP's that attempted gapping in prelim test: 452942
Number of HSP's gapped (non-prelim): 1979
length of query: 284
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 143
effective length of database: 9,050,888,538
effective search space: 1294277060934
effective search space used: 1294277060934
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)