Query 023328
Match_columns 284
No_of_seqs 136 out of 196
Neff 4.8
Searched_HMMs 13730
Date Mon Mar 25 04:57:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023328.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/023328hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1b0na1 a.34.1.1 (A:74-108) Si 77.1 1 7.3E-05 27.7 3.0 21 174-194 8-28 (35)
2 d1mxsa_ c.1.10.1 (A:) KDPG ald 73.2 3.5 0.00026 34.4 6.7 124 79-230 3-139 (216)
3 d1vhca_ c.1.10.1 (A:) Hypothet 72.5 4.1 0.0003 33.8 7.0 121 83-231 4-137 (212)
4 d1wbha1 c.1.10.1 (A:1-213) KDP 70.0 4.5 0.00033 33.6 6.6 124 129-281 40-175 (213)
5 d1stza1 a.4.5.51 (A:14-100) He 68.7 1.9 0.00014 31.2 3.4 70 21-116 4-73 (87)
6 d1wa3a1 c.1.10.1 (A:2-203) KDP 57.1 15 0.0011 29.8 7.5 125 128-281 33-169 (202)
7 d1kwma2 d.58.3.1 (A:1A-95A) Pr 53.4 17 0.0013 25.5 6.4 51 232-282 12-71 (95)
8 d2p5ka1 a.4.5.3 (A:2-64) Argin 50.1 4.1 0.0003 27.8 2.2 28 80-107 34-61 (63)
9 d1jhfa1 a.4.5.2 (A:2-72) LexA 46.3 6.4 0.00047 26.8 2.8 57 21-102 5-61 (71)
10 d1b4aa1 a.4.5.3 (A:4-78) Argin 45.2 6.1 0.00044 27.8 2.6 28 80-107 32-59 (75)
11 d1aoya_ a.4.5.3 (A:) Arginine 43.7 6.1 0.00045 28.0 2.4 26 82-107 42-67 (78)
12 d1wj5a_ a.4.5.59 (A:) OB fold- 43.5 5.1 0.00037 30.8 2.0 30 81-111 78-108 (120)
13 d1jqga2 d.58.3.1 (A:4P-100P) P 38.6 34 0.0025 23.6 6.0 46 237-282 15-63 (92)
14 d2boaa2 d.58.3.1 (A:4-99) Proc 36.9 35 0.0025 23.7 5.8 57 226-282 3-66 (94)
15 d1p6ra_ a.4.5.39 (A:) Penicill 31.5 16 0.0012 25.3 3.0 27 81-107 42-68 (82)
16 d2v9va2 a.4.5.35 (A:438-510) C 31.2 53 0.0038 21.6 5.7 61 147-233 6-66 (73)
17 d2ooxe1 d.37.1.1 (E:3-181) Unc 25.0 24 0.0017 26.3 3.2 41 138-178 117-167 (179)
18 d2g9wa1 a.4.5.39 (A:3-124) Hyp 23.8 26 0.0019 25.5 3.1 30 81-110 41-70 (122)
19 d1w8ia_ c.120.1.1 (A:) Hypothe 23.0 34 0.0025 25.6 3.8 112 131-261 3-122 (155)
20 d1pcaa1 d.58.3.1 (A:4A-99A) Pr 22.7 98 0.0072 21.0 6.1 57 226-282 3-66 (94)
21 d2af7a1 a.152.1.2 (A:1-119) Ga 22.7 33 0.0024 25.0 3.5 27 172-198 74-100 (119)
22 d1twia2 c.1.6.1 (A:50-313) Dia 22.6 28 0.0021 28.1 3.4 22 136-158 26-48 (264)
23 d1r1ta_ a.4.5.5 (A:) SmtB repr 22.4 19 0.0014 25.5 2.0 27 81-107 51-77 (98)
24 d1qzza1 a.4.5.29 (A:10-101) Ac 22.1 26 0.0019 24.7 2.7 36 81-117 55-90 (92)
25 d1syra_ c.47.1.1 (A:) Thioredo 21.5 90 0.0066 20.9 5.6 26 150-175 35-60 (103)
26 d1r1ua_ a.4.5.5 (A:) Metal-sen 21.3 21 0.0015 25.2 2.0 27 81-107 46-72 (94)
27 d1f3ta2 c.1.6.1 (A:44-283) Euk 21.0 30 0.0022 27.6 3.2 16 169-184 71-86 (240)
28 d2b5ea4 c.47.1.2 (A:23-141) Pr 20.6 22 0.0016 25.2 2.0 19 180-198 101-119 (119)
29 d1wrua2 b.106.1.1 (A:3-176) Ba 20.3 29 0.0021 25.9 2.8 28 238-265 144-171 (174)
30 d1wiva_ a.5.2.1 (A:) Ubiquitin 20.3 48 0.0035 22.5 3.7 30 170-199 41-71 (73)
31 d1sd4a_ a.4.5.39 (A:) Penicill 20.2 33 0.0024 25.0 3.0 27 81-107 39-65 (122)
No 1
>d1b0na1 a.34.1.1 (A:74-108) SinR repressor dimerisation domain {Bacillus subtilis [TaxId: 1423]}
Probab=77.09 E-value=1 Score=27.68 Aligned_cols=21 Identities=24% Similarity=0.455 Sum_probs=18.9
Q ss_pred HHHHHHHcCCCHHHHHHHHhh
Q 023328 174 SLYNAFENGITAEQIISFLQQ 194 (284)
Q Consensus 174 Sv~~Al~~GITA~QIi~fL~~ 194 (284)
=|+.|+.+||+-+|.-.||+-
T Consensus 8 lVkeAM~SGvSK~QFrEflef 28 (35)
T d1b0na1 8 LVRDAMTSGVSKKQFREFLDY 28 (35)
T ss_dssp HHHHHHHSCCCHHHHHHHHHH
T ss_pred HHHHHHHccCCHHHHHHHHHH
Confidence 479999999999999999973
No 2
>d1mxsa_ c.1.10.1 (A:) KDPG aldolase {Pseudomonas putida [TaxId: 303]}
Probab=73.20 E-value=3.5 Score=34.39 Aligned_cols=124 Identities=18% Similarity=0.260 Sum_probs=82.8
Q ss_pred CCHHHHHHHHHhhhcCeeeEee-CCCcceecchhhHHhhhcCCCcccccCcceEEEeeCceEEEecCChhHHHHHHHHHh
Q 023328 79 LSEIQRSMIKDFADLGLVKLQQ-GRKESWFIPTKLATNLSMSLTDSSARKEGFVVVETNFRMYAYSTSKLHCEILRLFSK 157 (284)
Q Consensus 79 Lt~~q~~~L~~l~~~GLvy~~~-~~~~~fy~pT~La~~L~~~~~~~~~~~~g~IIvETNFrvYAYT~S~lqiaiL~lF~~ 157 (284)
+++.+..+=.-|+.-++|=.-. .+.+.-- +++-.|.. .|.=++|-=+| +|--... ...
T Consensus 3 ~~~~~~~i~~~l~~~~iipvl~~~~~~~a~---~~~~al~~---------~Gi~~iEitl~------~p~a~~~---i~~ 61 (216)
T d1mxsa_ 3 MADKAARIDAICEKARILPVITIAREEDIL---PLADALAA---------GGIRTLEVTLR------SQHGLKA---IQV 61 (216)
T ss_dssp HHHHHHHHHHHHHHHSEEEEECCSCGGGHH---HHHHHHHH---------TTCCEEEEESS------STHHHHH---HHH
T ss_pred HHHHHHHHHHHHHhCCEEEEEECCCHHHHH---HHHHHHHH---------CCCCEEEEeCC------ChhHHHH---HHH
Confidence 3455556666666677764432 2222211 22222222 25555555444 5544444 456
Q ss_pred hHhcCCceEEE---EeCHHHHHHHHHcCC-------CHHHHHHHHhhcCCccccccCCCCCh--hHHHHHHHHHHhcCce
Q 023328 158 IEYQLPNLIVG---AITKESLYNAFENGI-------TAEQIISFLQQNAHPRVADRIPSVPE--NVCDQIRLWESDLNRV 225 (284)
Q Consensus 158 l~~r~Pnlvvg---~iTReSv~~Al~~GI-------TA~QIi~fL~~hAHp~m~~~~p~lP~--tV~dQIrLWe~E~~R~ 225 (284)
+..++|++.|| ++|++.+++|.+.|. +-..++.+-..+-.| .+|= |..+=...|+.-.+-+
T Consensus 62 l~~~~p~~~vGaGTV~~~~~~~~a~~aGa~FivsP~~~~~v~~~a~~~~i~-------~iPGv~TpsEi~~A~~~G~~~v 134 (216)
T d1mxsa_ 62 LREQRPELCVGAGTVLDRSMFAAVEAAGAQFVVTPGITEDILEAGVDSEIP-------LLPGISTPSEIMMGYALGYRRF 134 (216)
T ss_dssp HHHHCTTSEEEEECCCSHHHHHHHHHHTCSSEECSSCCHHHHHHHHHCSSC-------EECEECSHHHHHHHHTTTCCEE
T ss_pred HHHhCCCcceeeeeeecHHHHHHHHhCCCCEEECCCCcHHHHHHHHhcCCC-------ccCCcCCHHHHHHHHHCCCCEE
Confidence 66689999999 899999999999996 467888888877665 6774 7888889999999999
Q ss_pred eeccc
Q 023328 226 EMTPA 230 (284)
Q Consensus 226 ~~~~g 230 (284)
++.++
T Consensus 135 KlFPA 139 (216)
T d1mxsa_ 135 KLFPA 139 (216)
T ss_dssp EETTH
T ss_pred Eeccc
Confidence 98885
No 3
>d1vhca_ c.1.10.1 (A:) Hypothetical protein HI0047 {Haemophilus influenzae [TaxId: 727]}
Probab=72.55 E-value=4.1 Score=33.77 Aligned_cols=121 Identities=21% Similarity=0.319 Sum_probs=85.0
Q ss_pred HHHHHHHhhhcCeeeEeeC-CCcceecchhhHHhhhcCCCcccccCcceEEEeeCceEEEecCChhHHHHHHHHHhhHhc
Q 023328 83 QRSMIKDFADLGLVKLQQG-RKESWFIPTKLATNLSMSLTDSSARKEGFVVVETNFRMYAYSTSKLHCEILRLFSKIEYQ 161 (284)
Q Consensus 83 q~~~L~~l~~~GLvy~~~~-~~~~fy~pT~La~~L~~~~~~~~~~~~g~IIvETNFrvYAYT~S~lqiaiL~lF~~l~~r 161 (284)
-+++++.|.+.++|-.-.. +... .-+++-.|.. .|.=++|-=+| +|--. ....++..+
T Consensus 4 ~~~~~~~l~~~~iipvlr~~~~~~---~~~~~~al~~---------~Gi~~iEitl~------~~~a~---~~I~~l~~~ 62 (212)
T d1vhca_ 4 TQQIIEKLRELKIVPVIALDNADD---ILPLADTLAK---------NGLSVAEITFR------SEAAA---DAIRLLRAN 62 (212)
T ss_dssp HHHHHHHHHHHCEEEEECCSSGGG---HHHHHHHHHH---------TTCCEEEEETT------STTHH---HHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEEEeCCCHHH---HHHHHHHHHH---------CCCCEEEEeCC------ChhHH---HHHHHHHhc
Confidence 3578889999999866532 2222 1233333322 25556665554 33333 344566678
Q ss_pred CCceEEE---EeCHHHHHHHHHcCC-------CHHHHHHHHhhcCCccccccCCCCCh--hHHHHHHHHHHhcCceeecc
Q 023328 162 LPNLIVG---AITKESLYNAFENGI-------TAEQIISFLQQNAHPRVADRIPSVPE--NVCDQIRLWESDLNRVEMTP 229 (284)
Q Consensus 162 ~Pnlvvg---~iTReSv~~Al~~GI-------TA~QIi~fL~~hAHp~m~~~~p~lP~--tV~dQIrLWe~E~~R~~~~~ 229 (284)
+|++.+| ++|.+.+++|.+.|- .-++++.+-..+-.| .+|- |..+=...|+.-.+-+++.+
T Consensus 63 ~p~~~vGaGTV~~~~~~~~a~~aGa~FivSP~~~~~v~~~a~~~~i~-------~iPGv~TpsEi~~A~~~G~~~vK~FP 135 (212)
T d1vhca_ 63 RPDFLIAAGTVLTAEQVVLAKSSGADFVVTPGLNPKIVKLCQDLNFP-------ITPGVNNPMAIEIALEMGISAVKFFP 135 (212)
T ss_dssp CTTCEEEEESCCSHHHHHHHHHHTCSEEECSSCCHHHHHHHHHTTCC-------EECEECSHHHHHHHHHTTCCEEEETT
T ss_pred CCCceEeeeecccHHHHHHHHhhCCcEEECCCCCHHHHHHHHhcCCC-------ccCCcCCHHHHHHHHHCCCCEEEEcc
Confidence 9999999 899999999999995 356899998887665 7774 78888889999999999988
Q ss_pred ce
Q 023328 230 AH 231 (284)
Q Consensus 230 g~ 231 (284)
+-
T Consensus 136 A~ 137 (212)
T d1vhca_ 136 AE 137 (212)
T ss_dssp TT
T ss_pred cc
Confidence 63
No 4
>d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]}
Probab=70.00 E-value=4.5 Score=33.57 Aligned_cols=124 Identities=18% Similarity=0.264 Sum_probs=81.6
Q ss_pred ceEEEeeCceEEEecCChhHHHHHHHHHhhHhcCCceEEE---EeCHHHHHHHHHcCC-------CHHHHHHHHhhcCCc
Q 023328 129 GFVVVETNFRMYAYSTSKLHCEILRLFSKIEYQLPNLIVG---AITKESLYNAFENGI-------TAEQIISFLQQNAHP 198 (284)
Q Consensus 129 g~IIvETNFrvYAYT~S~lqiaiL~lF~~l~~r~Pnlvvg---~iTReSv~~Al~~GI-------TA~QIi~fL~~hAHp 198 (284)
|.=++|-=+| +|-- +..+.++..++|++.+| ++|.+.+++|.+.|. .-..++.+...+-.|
T Consensus 40 Gi~~iEitl~------tp~a---~~~I~~l~~~~p~~~vGaGTV~~~~~~~~a~~aGa~FivSP~~~~~v~~~a~~~~i~ 110 (213)
T d1wbha1 40 GVRVLNVTLR------TECA---VDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLLKAATEGTIP 110 (213)
T ss_dssp TCCEEEEESC------STTH---HHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCEEESSCCHHHHHHHHHSSSC
T ss_pred CCCEEEEeCC------ChhH---HHHHHHHHHHCCCCeeeccccccHHHHHHHHHCCCcEEECCCCCHHHHHHHHhcCCC
Confidence 5555665444 3433 44455566789999999 899999999999995 456788888887655
Q ss_pred cccccCCCCCh--hHHHHHHHHHHhcCceeeccceeeccCCCHHHHHHHHHHHHHcCeEeeecCCCceEEEeccccHHHH
Q 023328 199 RVADRIPSVPE--NVCDQIRLWESDLNRVEMTPAHYYEEFPSRDVFEAACDYARDRSGLLWEDSKKMRLVVNAEIHMHMR 276 (284)
Q Consensus 199 ~m~~~~p~lP~--tV~dQIrLWe~E~~R~~~~~g~Ly~~f~s~~~fe~~~~yA~~~g~llw~~~~kr~~~V~~~~h~~v~ 276 (284)
.+|= |..+=...|+.-.+-+++.++-.+ . =.+|.+.+...+ +.-+.+-...=.-++++
T Consensus 111 -------~iPGv~TpsEi~~A~~~G~~~vKlFPA~~~---G-------g~~~lkal~~p~---p~~~~~ptGGV~~~n~~ 170 (213)
T d1wbha1 111 -------LIPGISTVSELMLGMDYGLKEFKFFPAEAN---G-------GVKALQAIAGPF---SQVRFCPTGGISPANYR 170 (213)
T ss_dssp -------EEEEESSHHHHHHHHHTTCCEEEETTTTTT---T-------HHHHHHHHHTTC---TTCEEEEBSSCCTTTHH
T ss_pred -------ccCCcCCHHHHHHHHHCCCCEEEeccchhc---C-------hHHHHHHhcCcc---cCCceeeeCCCCHHHHH
Confidence 6774 788888899999999999887433 1 123444433221 22233332233345688
Q ss_pred HHHhh
Q 023328 277 EFLRG 281 (284)
Q Consensus 277 ~f~k~ 281 (284)
+|++.
T Consensus 171 ~yl~~ 175 (213)
T d1wbha1 171 DYLAL 175 (213)
T ss_dssp HHHTS
T ss_pred HHHhC
Confidence 88764
No 5
>d1stza1 a.4.5.51 (A:14-100) Heat-inducible transcription repressor HrcA, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=68.71 E-value=1.9 Score=31.20 Aligned_cols=70 Identities=16% Similarity=0.153 Sum_probs=46.4
Q ss_pred hhHHHHHHHHhCCCCCCCCCCCChhHHHHHHhcCCcccchhhhccccccccccccCCCCCHHHHHHHHHhhhcCeeeEee
Q 023328 21 GQWECFLLQLISSAQAERPTNFSSSMMKVFQRGLLIQSILRSLKFLCQGILEAYNLNTLSEIQRSMIKDFADLGLVKLQQ 100 (284)
Q Consensus 21 ~~WE~IL~~mVgs~~~~~~~~~s~~v~~lL~~~~Lm~~~lf~L~~~~~~lG~~Y~~~~Lt~~q~~~L~~l~~~GLvy~~~ 100 (284)
+|.+.||.++|..-.. .+-+.+...|..+.|| +--+.|-++.|..|.+.|+|.+.-
T Consensus 4 ~Rq~~IL~~Ive~y~~---~g~Pv~s~~i~~~~~l---------------------~~S~aTIRn~m~~LE~~G~l~~~h 59 (87)
T d1stza1 4 DRQRKVLYCIVREYIE---NKKPVSSQRVLEVSNI---------------------EFSSATIRNDMKKLEYLGYIYQPH 59 (87)
T ss_dssp HHHHHHHHHHHHHHHH---HCSCBCHHHHHHHSCC---------------------CSCHHHHHHHHHHHHHTTSEECCS
T ss_pred HHHHHHHHHHHHHHHH---cCCccCHHHHHHHhCC---------------------CCCHHHHHHHHHHHHHCCcccCCC
Confidence 5777888888855322 2333344455444444 223689999999999999998865
Q ss_pred CCCcceecchhhHHhh
Q 023328 101 GRKESWFIPTKLATNL 116 (284)
Q Consensus 101 ~~~~~fy~pT~La~~L 116 (284)
..+++ +||..+..+
T Consensus 60 ~s~Gr--iPT~~g~r~ 73 (87)
T d1stza1 60 TSAGR--IPTDKGLRF 73 (87)
T ss_dssp SCSCB--EECHHHHHH
T ss_pred CCCCC--cccHHHHHH
Confidence 44443 499988755
No 6
>d1wa3a1 c.1.10.1 (A:2-203) KDPG aldolase {Thermotoga maritima [TaxId: 2336]}
Probab=57.11 E-value=15 Score=29.76 Aligned_cols=125 Identities=14% Similarity=0.212 Sum_probs=80.4
Q ss_pred cceEEEeeCceEEEecCChhHHHHHHHHHhhHhcCCceEEEE---eCHHHHHHHHHcCCC-------HHHHHHHHhhcCC
Q 023328 128 EGFVVVETNFRMYAYSTSKLHCEILRLFSKIEYQLPNLIVGA---ITKESLYNAFENGIT-------AEQIISFLQQNAH 197 (284)
Q Consensus 128 ~g~IIvETNFrvYAYT~S~lqiaiL~lF~~l~~r~Pnlvvg~---iTReSv~~Al~~GIT-------A~QIi~fL~~hAH 197 (284)
.|.=++|-.+| +|--...++..++ ...|++.||. +|++.+++|.+.|-. -.+++++...+-+
T Consensus 33 ~Gi~~iEitlr------~p~a~~~i~~l~~--~~~~~~~vGaGTV~~~~~~~~a~~aGa~fivsP~~~~~v~~~~~~~~i 104 (202)
T d1wa3a1 33 GGVHLIEITFT------VPDADTVIKELSF--LKEKGAIIGAGTVTSVEQCRKAVESGAEFIVSPHLDEEISQFCKEKGV 104 (202)
T ss_dssp TTCCEEEEETT------STTHHHHHHHTHH--HHHTTCEEEEESCCSHHHHHHHHHHTCSEEECSSCCHHHHHHHHHHTC
T ss_pred cCCCEEEEecC------CccHHHHHHHHHH--hcCCCcEEEecccccHHHHHHHHhhcccEEeCCCCcHHHHHHHHhcCC
Confidence 46778888877 4444444443222 2349999984 999999999999853 4678888887776
Q ss_pred ccccccCCCCCh--hHHHHHHHHHHhcCceeeccceeeccCCCHHHHHHHHHHHHHcCeEeeecCCCceEEEeccccHHH
Q 023328 198 PRVADRIPSVPE--NVCDQIRLWESDLNRVEMTPAHYYEEFPSRDVFEAACDYARDRSGLLWEDSKKMRLVVNAEIHMHM 275 (284)
Q Consensus 198 p~m~~~~p~lP~--tV~dQIrLWe~E~~R~~~~~g~Ly~~f~s~~~fe~~~~yA~~~g~llw~~~~kr~~~V~~~~h~~v 275 (284)
| .+|- |..+=.+-|+.-.+-+++.++-.+ . -+|.+.+...+ +.-+.+-+.-=.-+++
T Consensus 105 ~-------~iPGv~TpsEi~~A~~~G~~~lK~fPa~~~----------G-~~~lk~l~~p~---p~i~~iptGGI~~~n~ 163 (202)
T d1wa3a1 105 F-------YMPGVMTPTELVKAMKLGHTILKLFPGEVV----------G-PQFVKAMKGPF---PNVKFVPTGGVNLDNV 163 (202)
T ss_dssp E-------EECEECSHHHHHHHHHTTCCEEEETTHHHH----------H-HHHHHHHHTTC---TTCEEEEBSSCCTTTH
T ss_pred c-------eeCCcCcHHHHHHHHHCCCCEEEecchhhc----------C-HHHHHHHhCcc---cCCcEEeeCCCCHHHH
Confidence 6 6674 777888889988888888775322 1 15666543221 2222222222234668
Q ss_pred HHHHhh
Q 023328 276 REFLRG 281 (284)
Q Consensus 276 ~~f~k~ 281 (284)
++|++.
T Consensus 164 ~~~l~a 169 (202)
T d1wa3a1 164 CEWFKA 169 (202)
T ss_dssp HHHHHH
T ss_pred HHHHHC
Confidence 888864
No 7
>d1kwma2 d.58.3.1 (A:1A-95A) Procarboxypeptidase B {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.36 E-value=17 Score=25.50 Aligned_cols=51 Identities=12% Similarity=0.225 Sum_probs=41.0
Q ss_pred eec-cCCCHHHHHHHHHHHHHcCeEeeecCCC--------ceEEEeccccHHHHHHHhhc
Q 023328 232 YYE-EFPSRDVFEAACDYARDRSGLLWEDSKK--------MRLVVNAEIHMHMREFLRGQ 282 (284)
Q Consensus 232 Ly~-~f~s~~~fe~~~~yA~~~g~llw~~~~k--------r~~~V~~~~h~~v~~f~k~~ 282 (284)
+|+ ...+.++.+.+.+.+++.++-.|..+.. -.+.|+++..+.+++|+++.
T Consensus 12 V~rV~~~~~~q~~~L~~L~~~~~ldfW~~~s~~~~~~g~~vdv~V~p~~~~~~~~~L~~~ 71 (95)
T d1kwma2 12 VFRVNVEDENHINIIRELASTTQIDFWKPDSVTQIKPHSTVDFRVKAEDTVTVENVLKQN 71 (95)
T ss_dssp EEEEEECSHHHHHHHHHHHHHSCEEEEESSSGGGCCSSEEEEEEECGGGHHHHHHHHHHT
T ss_pred EEEEEeCCHHHHHHHHHHhccCceEecCCCCccccCCCCeEEEEECHHHHHHHHHHHHHC
Confidence 454 3467788999999999999999976531 26899999999999999874
No 8
>d2p5ka1 a.4.5.3 (A:2-64) Arginine repressor (ArgR), N-terminal DNA-binding domain {Bacillus subtilis [TaxId: 1423]}
Probab=50.07 E-value=4.1 Score=27.82 Aligned_cols=28 Identities=21% Similarity=0.311 Sum_probs=23.7
Q ss_pred CHHHHHHHHHhhhcCeeeEeeCCCccee
Q 023328 80 SEIQRSMIKDFADLGLVKLQQGRKESWF 107 (284)
Q Consensus 80 t~~q~~~L~~l~~~GLvy~~~~~~~~fy 107 (284)
.-||-++=+||+|+|+|..+..++...|
T Consensus 34 ~vTQaTlSRDL~eLg~vKv~~~~g~~~Y 61 (63)
T d2p5ka1 34 KVTQATVSRDIKELHLVKVPTNNGSYKY 61 (63)
T ss_dssp CCCHHHHHHHHHHHTCEEEEETTTEEEE
T ss_pred CeeHHHHHHHHHHhCCEEeeCCCCcEEe
Confidence 3468888999999999999987777777
No 9
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=46.27 E-value=6.4 Score=26.81 Aligned_cols=57 Identities=12% Similarity=0.158 Sum_probs=40.1
Q ss_pred hhHHHHHHHHhCCCCCCCCCCCChhHHHHHHhcCCcccchhhhccccccccccccCCCCCHHHHHHHHHhhhcCeeeEee
Q 023328 21 GQWECFLLQLISSAQAERPTNFSSSMMKVFQRGLLIQSILRSLKFLCQGILEAYNLNTLSEIQRSMIKDFADLGLVKLQQ 100 (284)
Q Consensus 21 ~~WE~IL~~mVgs~~~~~~~~~s~~v~~lL~~~~Lm~~~lf~L~~~~~~lG~~Y~~~~Lt~~q~~~L~~l~~~GLvy~~~ 100 (284)
++...||.|+..--.. .+.++++.++-.+-|+-+ +.+-...|..|.+.|++-...
T Consensus 5 ~rQ~~vL~~I~~~~~~---~G~~Ps~rei~~~~g~~S----------------------~stv~~~l~~Le~kG~I~r~~ 59 (71)
T d1jhfa1 5 ARQQEVFDLIRDHISQ---TGMPPTRAEIAQRLGFRS----------------------PNAAEEHLKALARKGVIEIVS 59 (71)
T ss_dssp HHHHHHHHHHHHHHHH---HSSCCCHHHHHHHTTCSS----------------------HHHHHHHHHHHHHTTSEEECS
T ss_pred HHHHHHHHHHHHHHHH---hCCCCCHHHHHHHcCCCC----------------------HHHHHHHHHHHHHCcCeecCC
Confidence 4667788888765433 466677777766666522 467788999999999997764
Q ss_pred CC
Q 023328 101 GR 102 (284)
Q Consensus 101 ~~ 102 (284)
..
T Consensus 60 ~~ 61 (71)
T d1jhfa1 60 GA 61 (71)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 10
>d1b4aa1 a.4.5.3 (A:4-78) Arginine repressor (ArgR), N-terminal DNA-binding domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=45.20 E-value=6.1 Score=27.76 Aligned_cols=28 Identities=18% Similarity=0.303 Sum_probs=23.9
Q ss_pred CHHHHHHHHHhhhcCeeeEeeCCCccee
Q 023328 80 SEIQRSMIKDFADLGLVKLQQGRKESWF 107 (284)
Q Consensus 80 t~~q~~~L~~l~~~GLvy~~~~~~~~fy 107 (284)
+-||-++=+||+|+|+|..+..++...|
T Consensus 32 ~vTQaTlSRDL~eLg~vKv~~~~g~~~Y 59 (75)
T d1b4aa1 32 NVTQATVSRDIKEMQLVKVPMANGRYKY 59 (75)
T ss_dssp CCCHHHHHHHHHHTTCEEEECSSSCEEE
T ss_pred ceeHHHHHHHHHHhCCEEeeCCCCcEEE
Confidence 4578889999999999999987777777
No 11
>d1aoya_ a.4.5.3 (A:) Arginine repressor (ArgR), N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=43.73 E-value=6.1 Score=27.99 Aligned_cols=26 Identities=15% Similarity=0.300 Sum_probs=23.2
Q ss_pred HHHHHHHHhhhcCeeeEeeCCCccee
Q 023328 82 IQRSMIKDFADLGLVKLQQGRKESWF 107 (284)
Q Consensus 82 ~q~~~L~~l~~~GLvy~~~~~~~~fy 107 (284)
+|-.+=+||+|+|+|..+..++..+|
T Consensus 42 TQaTiSRDL~eLg~vKv~~~~g~~~Y 67 (78)
T d1aoya_ 42 NQSKVSRMLTKFGAVRTRNAKMEMVY 67 (78)
T ss_dssp CHHHHHHHHHHHTCEEEECTTSCEEE
T ss_pred hHHHHHHHHHHhCCEEeeCCCCCEEE
Confidence 68888999999999999988787878
No 12
>d1wj5a_ a.4.5.59 (A:) OB fold-containing protein 1, Obfc1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=43.49 E-value=5.1 Score=30.76 Aligned_cols=30 Identities=13% Similarity=0.297 Sum_probs=23.2
Q ss_pred HHHHHHHHHhhhcCeeeEeeCCC-cceecchh
Q 023328 81 EIQRSMIKDFADLGLVKLQQGRK-ESWFIPTK 111 (284)
Q Consensus 81 ~~q~~~L~~l~~~GLvy~~~~~~-~~fy~pT~ 111 (284)
.-.++.++-|.|-|+||++.+.. ..|| .|+
T Consensus 78 siFKeAi~~Lqe~G~VFqK~~~~D~lYy-VT~ 108 (120)
T d1wj5a_ 78 RVFKNALQLLQEKGLVFQRDSGSDKLYY-VTT 108 (120)
T ss_dssp HHHHHHHHHHHHHTSEECSSCSSSCCBE-ECS
T ss_pred HHHHHHHHHHHHCCEEEecCCCccceEE-eec
Confidence 44567899999999999997644 5788 554
No 13
>d1jqga2 d.58.3.1 (A:4P-100P) Procarboxypeptidase A {Cotton bollworm (Helicoverpa armigera) [TaxId: 29058]}
Probab=38.57 E-value=34 Score=23.60 Aligned_cols=46 Identities=20% Similarity=0.266 Sum_probs=38.2
Q ss_pred CCHHHHHHHHHHHHHcCeEeeecCC---CceEEEeccccHHHHHHHhhc
Q 023328 237 PSRDVFEAACDYARDRSGLLWEDSK---KMRLVVNAEIHMHMREFLRGQ 282 (284)
Q Consensus 237 ~s~~~fe~~~~yA~~~g~llw~~~~---kr~~~V~~~~h~~v~~f~k~~ 282 (284)
.+.++.+.+.++.+..++-.|..+. .-.+.|+++..+.+++|+++.
T Consensus 15 ~~~~q~~~L~~le~~~~~dfW~~~~~~~~vdI~V~p~~~~~f~~~L~~~ 63 (92)
T d1jqga2 15 ASMDQVKLVHDFENDLMLDVWSDAVPGRPGKVLVPKFKREIFENFLKQS 63 (92)
T ss_dssp CSHHHHHHHHHHHHHTTCEEEECCBTTBCEEEEECGGGHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhccCCcEecCCCCCCeEEEEECHHHHHHHHHHHHHc
Confidence 5678889999999999999997532 247899999999999999864
No 14
>d2boaa2 d.58.3.1 (A:4-99) Procarboxypeptidase A {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.89 E-value=35 Score=23.69 Aligned_cols=57 Identities=12% Similarity=0.197 Sum_probs=41.0
Q ss_pred eeccceeecc-CCCHHHHHHHHHHHHH--cCeEeeecCCC----ceEEEeccccHHHHHHHhhc
Q 023328 226 EMTPAHYYEE-FPSRDVFEAACDYARD--RSGLLWEDSKK----MRLVVNAEIHMHMREFLRGQ 282 (284)
Q Consensus 226 ~~~~g~Ly~~-f~s~~~fe~~~~yA~~--~g~llw~~~~k----r~~~V~~~~h~~v~~f~k~~ 282 (284)
.|..--+|+= -.|.++.+.+.++... .++-.|..+.. -.+.|++...+.+++|+++.
T Consensus 3 ~y~G~qV~rV~p~~~~q~~~L~~L~~~~~~~ldfW~~p~~~~~~vdv~V~p~~~~~~~~~L~~~ 66 (94)
T d2boaa2 3 KFFGDQVLRINVRNGDEISKLSQLVNSNNLKLNFWKSPSSFNRPVDVLVPSVSLQAFKSFLRSQ 66 (94)
T ss_dssp CCTTCEEEEECCCSHHHHHHHHHHTTTTGGGCEEEECCCSSSSCEEEEECGGGHHHHHHHHHHT
T ss_pred cccCCEEEEEEcCCHHHHHHHHHHHhcCCCCeeeeCCCCCCCCeEEEEECHHHHHHHHHHHHHC
Confidence 3444446653 3456778888888554 57888976543 47899999999999999875
No 15
>d1p6ra_ a.4.5.39 (A:) Penicillinase repressor BlaI {Bacillus licheniformis [TaxId: 1402]}
Probab=31.54 E-value=16 Score=25.30 Aligned_cols=27 Identities=7% Similarity=0.169 Sum_probs=21.9
Q ss_pred HHHHHHHHHhhhcCeeeEeeCCCccee
Q 023328 81 EIQRSMIKDFADLGLVKLQQGRKESWF 107 (284)
Q Consensus 81 ~~q~~~L~~l~~~GLvy~~~~~~~~fy 107 (284)
.|-+.+|..|.+-|+|-.++.....+|
T Consensus 42 tTv~T~L~rL~~KG~l~~~k~gr~~~Y 68 (82)
T d1p6ra_ 42 KTIQTMLLRLIKKGALNHHKEGRVFVY 68 (82)
T ss_dssp HHHHHHHHHHHHTTSEEEEEETTEEEE
T ss_pred hHHHHHHHHHHHCCCeEEEecCCeEEE
Confidence 588999999999999987765555555
No 16
>d2v9va2 a.4.5.35 (A:438-510) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=31.21 E-value=53 Score=21.60 Aligned_cols=61 Identities=15% Similarity=0.202 Sum_probs=44.5
Q ss_pred hHHHHHHHHHhhHhcCCceEEEEeCHHHHHHHHHcCCCHHHHHHHHhhcCCccccccCCCCChhHHHHHHHHHHhcCcee
Q 023328 147 LHCEILRLFSKIEYQLPNLIVGAITKESLYNAFENGITAEQIISFLQQNAHPRVADRIPSVPENVCDQIRLWESDLNRVE 226 (284)
Q Consensus 147 lqiaiL~lF~~l~~r~Pnlvvg~iTReSv~~Al~~GITA~QIi~fL~~hAHp~m~~~~p~lP~tV~dQIrLWe~E~~R~~ 226 (284)
++-.|++...+...+.| ++-|++.+.+.+-+. +.+|+.+.+.+--+-.+.+++.
T Consensus 6 l~~~i~~~L~~fH~~~P---------------~~~G~~keeLr~~l~-----------~~~~~~~f~~lL~~l~~~g~l~ 59 (73)
T d2v9va2 6 WWQAVTRALEEFHSRYP---------------LRPGLAREELRSRYF-----------SRLPARVYQALLEEWSREGRLQ 59 (73)
T ss_dssp HHHHHHHHHHHHHHHCT---------------TSSCEEHHHHHHHHC-----------TTSCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHHHHHCc---------------cccCCCHHHHHHHhc-----------ccCCHHHHHHHHHHHHHCCChh
Confidence 34456666666666666 356777777766543 4788889999988888999998
Q ss_pred eccceee
Q 023328 227 MTPAHYY 233 (284)
Q Consensus 227 ~~~g~Ly 233 (284)
...+++.
T Consensus 60 ~~g~~v~ 66 (73)
T d2v9va2 60 LAANTVA 66 (73)
T ss_dssp ECSSEEE
T ss_pred eeCCEEE
Confidence 8888764
No 17
>d2ooxe1 d.37.1.1 (E:3-181) Uncharacterized protein C1556.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Probab=25.03 E-value=24 Score=26.28 Aligned_cols=41 Identities=17% Similarity=0.248 Sum_probs=28.3
Q ss_pred eEEEecCChhHHHHHHHHHhhHhcCCc----------eEEEEeCHHHHHHH
Q 023328 138 RMYAYSTSKLHCEILRLFSKIEYQLPN----------LIVGAITKESLYNA 178 (284)
Q Consensus 138 rvYAYT~S~lqiaiL~lF~~l~~r~Pn----------lvvg~iTReSv~~A 178 (284)
-+++..+.++.-++..+..+-..|+|- .++|+||+..|-+.
T Consensus 117 ~i~v~~~~sl~~~~~~m~~~~~~~lpVvd~~g~~~~~~vvgiiT~~dIlk~ 167 (179)
T d2ooxe1 117 TIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKF 167 (179)
T ss_dssp CCCBCTTSBHHHHHHHHHHTTCSEEEEEEECTTTCCEEEEEEEEHHHHHHH
T ss_pred ceEECCCCcHHHHHHHhhhcCceEEEEEecCCCcCCCcEEEEEeHHHHHHH
Confidence 356777888877666666666666654 58999998764433
No 18
>d2g9wa1 a.4.5.39 (A:3-124) Hypothetical protein Rv1846c {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=23.78 E-value=26 Score=25.54 Aligned_cols=30 Identities=13% Similarity=0.245 Sum_probs=21.1
Q ss_pred HHHHHHHHHhhhcCeeeEeeCCCcceecch
Q 023328 81 EIQRSMIKDFADLGLVKLQQGRKESWFIPT 110 (284)
Q Consensus 81 ~~q~~~L~~l~~~GLvy~~~~~~~~fy~pT 110 (284)
.|-+.+|+.|.+-|+|-..+......|.|+
T Consensus 41 sTV~T~L~rL~~Kg~l~~~~~gr~~~Y~~~ 70 (122)
T d2g9wa1 41 TTVMAVLQRLAKKNLVLQIRDDRAHRYAPV 70 (122)
T ss_dssp HHHHHHHHHHHHTTSEEEEC---CCEEEES
T ss_pred HHHHHHHHHHHHCCCEEEeecCCeEEEEeC
Confidence 588999999999999987764444444354
No 19
>d1w8ia_ c.120.1.1 (A:) Hypothetical protein AF1683 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=23.03 E-value=34 Score=25.65 Aligned_cols=112 Identities=13% Similarity=0.009 Sum_probs=71.2
Q ss_pred EEEeeCceEEEec-CChhHHHHHHHHHhhHh-cCCceEEEEeCH-HHHHHHHHcCCCHHHHHHHHhhcCCccccccCCCC
Q 023328 131 VVVETNFRMYAYS-TSKLHCEILRLFSKIEY-QLPNLIVGAITK-ESLYNAFENGITAEQIISFLQQNAHPRVADRIPSV 207 (284)
Q Consensus 131 IIvETNFrvYAYT-~S~lqiaiL~lF~~l~~-r~Pnlvvg~iTR-eSv~~Al~~GITA~QIi~fL~~hAHp~m~~~~p~l 207 (284)
.+|.||+=+..+. +.+.|-...++|.++.. ..+.+++....= |-+.-.-..+-.|.+.+..+..... + .++
T Consensus 3 ~lvDT~~liA~~~~~D~~H~~a~~~~~~~~~~~~~~lvtt~~VL~E~~~ll~~~~~~a~~~l~~ll~~~~--v----~Vi 76 (155)
T d1w8ia_ 3 ALIDTGIFFGFYSLKDVHHMDSVAIVVHAVEGKWGRLFVTNHILDETLTLLKYKKLPADKFLEGFVESGV--L----NII 76 (155)
T ss_dssp EEECHHHHHHHHCTTSTTHHHHHHHHHHHHTTTTSEEEEEHHHHHHHHHHHHHTTCCHHHHHHHHTTTSS--S----EEE
T ss_pred EEEEhHHHHHHHcCCchhHHHHHHHHHHHHhccCCceeecchhHHHHHHHHHhhhHHHHHHHHHHHhCCC--e----EEE
Confidence 5778887665553 55778888999988754 566677664332 3333334445566677666543321 1 378
Q ss_pred ChhHHHHHHHHHHhc-----CceeeccceeeccCCCHHHHHHHHHHHHHcCeEeeecCC
Q 023328 208 PENVCDQIRLWESDL-----NRVEMTPAHYYEEFPSRDVFEAACDYARDRSGLLWEDSK 261 (284)
Q Consensus 208 P~tV~dQIrLWe~E~-----~R~~~~~g~Ly~~f~s~~~fe~~~~yA~~~g~llw~~~~ 261 (284)
|.+..+-.+-||.=+ ..+.+++++++ ..|+++|+-++.-|.
T Consensus 77 ~~~~e~~~rA~eL~~~~~~d~~lsftDa~~~-------------alA~~l~i~i~TfD~ 122 (155)
T d1w8ia_ 77 YTDDEVERKALEVFKARVYEKGFSYTDAISE-------------VVAEELKLKLISYDS 122 (155)
T ss_dssp CCCHHHHHHHHHHHHHTTTSTTCCHHHHHHH-------------HHHHHHTCEEECSCT
T ss_pred ecchHHHHHHHHHHHhhccccCCCHHHHHHH-------------HHHHHcCCCEEEecC
Confidence 899888888888632 24666766654 567888887775553
No 20
>d1pcaa1 d.58.3.1 (A:4A-99A) Procarboxypeptidase A {Pig (Sus scrofa) [TaxId: 9823]}
Probab=22.69 E-value=98 Score=21.05 Aligned_cols=57 Identities=7% Similarity=0.077 Sum_probs=38.5
Q ss_pred eeccceeeccC-CCHHHHHHHHHHHHH--cCeEeeecCCC----ceEEEeccccHHHHHHHhhc
Q 023328 226 EMTPAHYYEEF-PSRDVFEAACDYARD--RSGLLWEDSKK----MRLVVNAEIHMHMREFLRGQ 282 (284)
Q Consensus 226 ~~~~g~Ly~~f-~s~~~fe~~~~yA~~--~g~llw~~~~k----r~~~V~~~~h~~v~~f~k~~ 282 (284)
.+.+-=+|+=. .+.++.+.+.++... .++-.|..+.. -.+.|+++..+.+++|+++.
T Consensus 3 ~Y~g~kV~rV~~~~~~q~~~L~~L~~~~~~~ldfW~~p~~~~~~vdi~V~p~~~~~~~~~L~~~ 66 (94)
T d1pcaa1 3 DFVGHQVLRISVDDEAQVQKVKELEDLEHLQLDFWRGPARPGFPIDVRVPFPSIQAVKVFLEAH 66 (94)
T ss_dssp CCTTCEEEEECCCSHHHHHHHHHHTTCGGC--EEEECCCSTTSCEEEEECGGGHHHHHHHHHHT
T ss_pred cccCCEEEEEEcCCHHHHHHHHHHHhCCCCceEeeCCCCCCCCeEEEEECHHHHHHHHHHHHHC
Confidence 34444466533 355677888777553 46778987642 37899999999999999875
No 21
>d2af7a1 a.152.1.2 (A:1-119) Gamma-carboxymuconolactone decarboxylase, CMD {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=22.66 E-value=33 Score=25.03 Aligned_cols=27 Identities=26% Similarity=0.330 Sum_probs=22.0
Q ss_pred HHHHHHHHHcCCCHHHHHHHHhhcCCc
Q 023328 172 KESLYNAFENGITAEQIISFLQQNAHP 198 (284)
Q Consensus 172 ReSv~~Al~~GITA~QIi~fL~~hAHp 198 (284)
+--++.|+++|+|.++|..-+..-+..
T Consensus 74 ~~H~~~Al~~G~t~eEi~e~~~~~~~y 100 (119)
T d2af7a1 74 KSHVRGALNAGCSKDEIIEVMIQMAVY 100 (119)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 457899999999999999887755543
No 22
>d1twia2 c.1.6.1 (A:50-313) Diaminopimelate decarboxylase LysA {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=22.64 E-value=28 Score=28.10 Aligned_cols=22 Identities=36% Similarity=0.641 Sum_probs=13.1
Q ss_pred CceE-EEecCChhHHHHHHHHHhh
Q 023328 136 NFRM-YAYSTSKLHCEILRLFSKI 158 (284)
Q Consensus 136 NFrv-YAYT~S~lqiaiL~lF~~l 158 (284)
+|+| ||...+|. .+||+.+.+.
T Consensus 26 ~~~i~YAvKaN~~-~~vl~~l~~~ 48 (264)
T d1twia2 26 EFIVAYAYKANAN-LAITRLLAKL 48 (264)
T ss_dssp CEEEEEEGGGCCC-HHHHHHHHHT
T ss_pred ceEEEEEeccCCC-HHHHHHHHHc
Confidence 4555 77777776 3455655443
No 23
>d1r1ta_ a.4.5.5 (A:) SmtB repressor {Cyanobacteria (Synechococcus), pcc7942 [TaxId: 1129]}
Probab=22.41 E-value=19 Score=25.52 Aligned_cols=27 Identities=11% Similarity=0.358 Sum_probs=21.3
Q ss_pred HHHHHHHHHhhhcCeeeEeeCCCccee
Q 023328 81 EIQRSMIKDFADLGLVKLQQGRKESWF 107 (284)
Q Consensus 81 ~~q~~~L~~l~~~GLvy~~~~~~~~fy 107 (284)
++--.=|+.|++.|||..++.....||
T Consensus 51 stvS~HL~~L~~aglV~~~r~G~~~~Y 77 (98)
T d1r1ta_ 51 SAVSHQLRSLRNLRLVSYRKQGRHVYY 77 (98)
T ss_dssp HHHHHHHHHHHHTTSEEEEEETTEEEE
T ss_pred HHHHHHHHHHHHCCceEEEEECCEEEE
Confidence 445556888999999999887777777
No 24
>d1qzza1 a.4.5.29 (A:10-101) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}
Probab=22.13 E-value=26 Score=24.71 Aligned_cols=36 Identities=14% Similarity=0.299 Sum_probs=27.1
Q ss_pred HHHHHHHHHhhhcCeeeEeeCCCcceecchhhHHhhh
Q 023328 81 EIQRSMIKDFADLGLVKLQQGRKESWFIPTKLATNLS 117 (284)
Q Consensus 81 ~~q~~~L~~l~~~GLvy~~~~~~~~fy~pT~La~~L~ 117 (284)
+.-..+|+.|..+||+-....+...|. ||++.--|+
T Consensus 55 ~~l~rLlr~L~a~gll~~~~d~~~~~~-~t~~g~lL~ 90 (92)
T d1qzza1 55 QALSRLVRHLTVVGVLEGGEKQGRPLR-PTRLGMLLA 90 (92)
T ss_dssp HHHHHHHHHHHHTTSEECCCC-CCCCE-ECTTGGGGS
T ss_pred hHHHHHHHHHHHCCCeeeecCCCceec-ccHHHHhcc
Confidence 455679999999999987765555677 999876654
No 25
>d1syra_ c.47.1.1 (A:) Thioredoxin {Malarial parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=21.49 E-value=90 Score=20.94 Aligned_cols=26 Identities=4% Similarity=0.206 Sum_probs=15.9
Q ss_pred HHHHHHHhhHhcCCceEEEEeCHHHH
Q 023328 150 EILRLFSKIEYQLPNLIVGAITKESL 175 (284)
Q Consensus 150 aiL~lF~~l~~r~Pnlvvg~iTReSv 175 (284)
.+...|.++...+|+..++.+.-+..
T Consensus 35 ~~~~~~~~l~~~~~~~~~~~vd~d~~ 60 (103)
T d1syra_ 35 RIAPFYEECSKTYTKMVFIKVDVDEV 60 (103)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEETTTT
T ss_pred cccccchhhhhcccceEEEeeccccC
Confidence 44556666666677776666654433
No 26
>d1r1ua_ a.4.5.5 (A:) Metal-sensing transcriptional repressor CzrA {Staphylococcus aureus [TaxId: 1280]}
Probab=21.32 E-value=21 Score=25.20 Aligned_cols=27 Identities=15% Similarity=0.162 Sum_probs=21.3
Q ss_pred HHHHHHHHHhhhcCeeeEeeCCCccee
Q 023328 81 EIQRSMIKDFADLGLVKLQQGRKESWF 107 (284)
Q Consensus 81 ~~q~~~L~~l~~~GLvy~~~~~~~~fy 107 (284)
++--.=|+.|++.|||..++.....||
T Consensus 46 ~~vS~HL~~L~~~glv~~~r~G~~~~Y 72 (94)
T d1r1ua_ 46 SNVSHQLKLLKSVHLVKAKRQGQSMIY 72 (94)
T ss_dssp HHHHHHHHHHHHTTSEEEEEETTEEEE
T ss_pred HHHHHHHHHHHHCCceEEEEECCEEEE
Confidence 344556888999999999887777788
No 27
>d1f3ta2 c.1.6.1 (A:44-283) Eukaryotic ornithine decarboxylase {Trypanosoma brucei [TaxId: 5691]}
Probab=20.96 E-value=30 Score=27.62 Aligned_cols=16 Identities=13% Similarity=0.177 Sum_probs=12.0
Q ss_pred EeCHHHHHHHHHcCCC
Q 023328 169 AITKESLYNAFENGIT 184 (284)
Q Consensus 169 ~iTReSv~~Al~~GIT 184 (284)
--|++.++.|+++|+.
T Consensus 71 ~k~~~ei~~a~~~g~~ 86 (240)
T d1f3ta2 71 CKQISHIRYARDSGVD 86 (240)
T ss_dssp SCCHHHHHHHHHTTCC
T ss_pred cchhHHHHHHHHhccc
Confidence 3578888888888874
No 28
>d2b5ea4 c.47.1.2 (A:23-141) Protein disulfide isomerase, PDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.57 E-value=22 Score=25.17 Aligned_cols=19 Identities=37% Similarity=0.625 Sum_probs=16.4
Q ss_pred HcCCCHHHHHHHHhhcCCc
Q 023328 180 ENGITAEQIISFLQQNAHP 198 (284)
Q Consensus 180 ~~GITA~QIi~fL~~hAHp 198 (284)
....|+++|+.||++++.|
T Consensus 101 ~g~~~~~~l~~fi~k~~~P 119 (119)
T d2b5ea4 101 EGPRTAEAIVQFMIKQSQP 119 (119)
T ss_dssp CSCCSHHHHHHHHHHHTSC
T ss_pred cCCCCHHHHHHHHHHhhCC
Confidence 4457999999999999987
No 29
>d1wrua2 b.106.1.1 (A:3-176) Baseplate protein gpP {Bacteriophage mu [TaxId: 10677]}
Probab=20.29 E-value=29 Score=25.93 Aligned_cols=28 Identities=25% Similarity=0.283 Sum_probs=22.4
Q ss_pred CHHHHHHHHHHHHHcCeEeeecCCCceE
Q 023328 238 SRDVFEAACDYARDRSGLLWEDSKKMRL 265 (284)
Q Consensus 238 s~~~fe~~~~yA~~~g~llw~~~~kr~~ 265 (284)
+..+|+-+.+.|++.|+.+|.+.+.+..
T Consensus 144 ~ESd~~fl~RLa~~~G~~~~~~~~G~Lv 171 (174)
T d1wrua2 144 SETVYEALVRASRARGVLMTSNAAGELV 171 (174)
T ss_dssp TCBHHHHHHHHHHTTTCEEEECGGGCEE
T ss_pred CCcHHHHHHHHHHHCCCEEEECCCcEEE
Confidence 4678999999999999999976544433
No 30
>d1wiva_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=20.28 E-value=48 Score=22.49 Aligned_cols=30 Identities=17% Similarity=0.307 Sum_probs=24.4
Q ss_pred eCHHHHHHHHHc-CCCHHHHHHHHhhcCCcc
Q 023328 170 ITKESLYNAFEN-GITAEQIISFLQQNAHPR 199 (284)
Q Consensus 170 iTReSv~~Al~~-GITA~QIi~fL~~hAHp~ 199 (284)
.+|+.+++||.. |=..+.-+.||-+|+||.
T Consensus 41 F~~~~a~~AL~~~~~n~e~Av~~Lls~~~~~ 71 (73)
T d1wiva_ 41 FAEDVARKALKASGGDIEKATDWVFNNSGPS 71 (73)
T ss_dssp CCHHHHHHHHHHTTSCHHHHHHHHHHSCCSS
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHHHcCCCCC
Confidence 378888888864 456899999999999983
No 31
>d1sd4a_ a.4.5.39 (A:) Penicillinase repressor BlaI {Staphylococcus aureus [TaxId: 1280]}
Probab=20.15 E-value=33 Score=25.04 Aligned_cols=27 Identities=11% Similarity=0.265 Sum_probs=21.0
Q ss_pred HHHHHHHHHhhhcCeeeEeeCCCccee
Q 023328 81 EIQRSMIKDFADLGLVKLQQGRKESWF 107 (284)
Q Consensus 81 ~~q~~~L~~l~~~GLvy~~~~~~~~fy 107 (284)
.|-+.+|..|.+-|+|-..+......|
T Consensus 39 tTv~T~L~rL~~Kg~l~~~~~gr~~~Y 65 (122)
T d1sd4a_ 39 KTIRTLITRLYKKEIIKRYKSENIYFY 65 (122)
T ss_dssp HHHHHHHHHHHHTTSEEEEEETTEEEE
T ss_pred hHHHHHHHHHHhhhceeeeccCCeEEE
Confidence 578999999999999977665444444
Done!