RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 023332
(284 letters)
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 131 bits (330), Expect = 3e-38
Identities = 66/196 (33%), Positives = 115/196 (58%), Gaps = 5/196 (2%)
Query: 91 LIIVISGPSGVGKDALIKKLRES--RDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLT 148
+ ++S PSG GK +LI+ L ++ + V+ T+R RPGE +G+ Y+FV+ +EF
Sbjct: 3 TLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKE 62
Query: 149 MIDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVFL 208
MI ++ LE+A V+G+Y G ++ I + +A G D+ L +D QGAQ +R+ A +F+
Sbjct: 63 MISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGAQQIRQK-MPHARSIFI 121
Query: 209 MAESETALVERLVERKTESREELLVRIATAREEIKHVKNFDYVVVNAEGKLDVAVKLVES 268
+ S+ L RL R +S E + R+A A E+ H +DY++VN + D A+ +++
Sbjct: 122 LPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHYAEYDYLIVNDD--FDTALTDLKT 179
Query: 269 IIDAEKAKVQQRSAVI 284
II AE+ ++ ++
Sbjct: 180 IIRAERLRMSRQKQRH 195
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 121 bits (303), Expect = 2e-34
Identities = 74/185 (40%), Positives = 109/185 (58%), Gaps = 5/185 (2%)
Query: 93 IVISGPSGVGKDALIKKLRESR-DSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTMID 151
IVISGPSG GK L+KKL DS F V++T+R R GE NGKDY FVS +EF +MI
Sbjct: 4 IVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIK 63
Query: 152 KNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVFLMAE 211
NE +E+A G+Y G +++ G IL +D+QG ++++ + +A F+F+
Sbjct: 64 NNEFIEWAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVKSVKAIPELNARFLFIAPP 123
Query: 212 SETALVERLVERKTESREELLVRIATAREEIKHVKN--FDYVVVNAEGKLDVAVKLVESI 269
S L +RL R TE+ E + R++ A+ E+ + + D V+VN + LD A K ++
Sbjct: 124 SVEDLKKRLEGRGTETEESINKRLSAAQAELAYAETGAHDKVIVNDD--LDKAYKELKDF 181
Query: 270 IDAEK 274
I AEK
Sbjct: 182 IFAEK 186
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 114 bits (286), Expect = 8e-32
Identities = 68/190 (35%), Positives = 106/190 (55%), Gaps = 7/190 (3%)
Query: 93 IVISGPSGVGKDALIKKLRESRDS-LRFVVTATSRPMRPGEENGKDYYFVSKEEFLTMID 151
+V+SGPSG GK L+KKL + S F V+ T+R RPGEE+GKDYYFV++E I
Sbjct: 3 VVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMMQRDIA 62
Query: 152 KNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVFLMAE 211
+ +E+A G+ G K+ +R A +L VD+QG +++++ +++F+
Sbjct: 63 AGDFIEHAEFSGNLYGTSKEAVRAVQAMNRICVLDVDLQGVRSIKKT-DLCPIYIFVQPP 121
Query: 212 SETALVERLVERKTESREELLVRIATAREEIKHVKN---FDYVVVNAEGKLDVAVKLVES 268
S L +RL R TE+ E L R+A AR +++ K FD V++N + LD A ++
Sbjct: 122 SLDVLEQRLRLRNTETEESLAKRLAAARTDMESSKEPGLFDLVIINDD--LDKAYATLKQ 179
Query: 269 IIDAEKAKVQ 278
+ E K Q
Sbjct: 180 ALSEEIKKAQ 189
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 109 bits (273), Expect = 4e-30
Identities = 68/182 (37%), Positives = 106/182 (58%), Gaps = 5/182 (2%)
Query: 91 LIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTMI 150
++V+SGPS VGK +++ LRE +L F V+AT+R RPGE +G DY+F+ F +I
Sbjct: 3 RVVVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLI 62
Query: 151 DKNELLEYALVYGDYK--GIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVFL 208
D+ ELLE+A ++G G + +R A G +++ VD+ GA+ +++ AV VFL
Sbjct: 63 DQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKT-MPEAVTVFL 121
Query: 209 MAESETALVERLVERKTESREELLVRIATAREEIKHVKNFDYVVVNAEGKLDVAVKLVES 268
S L RL+ R TE+ + + R+ TAR E+ +FD VVVN L+ A + S
Sbjct: 122 APPSWQDLQARLIGRGTETADVIQRRLDTARIELAAQGDFDKVVVNRR--LESACAELVS 179
Query: 269 II 270
++
Sbjct: 180 LL 181
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 101 bits (252), Expect = 5e-27
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 15/183 (8%)
Query: 92 IIVISGPSGVGKDALIKKLRESR-DSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTMI 150
+V+ G GVG+ + L D + + T+RP + EENGK+YYFVS ++ + I
Sbjct: 5 TLVLLGAHGVGRRHIKNTLITKHPDRFAYPIPHTTRPPKKDEENGKNYYFVSHDQMMQDI 64
Query: 151 DKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVFLMA 210
NE LEY G + IR+ +G I A + R + VF+ A
Sbjct: 65 SNNEYLEYGSHEDAMYGTKLETIRKIHEQGLIAI-LDVEPQALKVLRTAEFAPFVVFIAA 123
Query: 211 ESETALVERLVERKTESREELLVRIATAREEIK--HVKNFDYVVVNAEGKLDVAVKLVES 268
+ T + +E L R+ + ++ + FD ++N E +D ++ +E
Sbjct: 124 PTITPGLN---------EDESLQRLQKESDILQRTYAHYFDLTIINNE--IDETIRHLEE 172
Query: 269 IID 271
++
Sbjct: 173 AVE 175
>d1kjwa2 c.37.1.1 (A:526-724) Guanylate kinase-like domain of Psd-95
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 199
Score = 98.0 bits (243), Expect = 2e-25
Identities = 40/188 (21%), Positives = 69/188 (36%), Gaps = 10/188 (5%)
Query: 93 IVISGPSGVGKDALIKKL-RESRDSLRFVVTATSRPMRPGEENGKDYYF-VSKEEFLTMI 150
I+I GP KD L E D V T+RP R E +G+DY+F S+E+ I
Sbjct: 12 IIILGP---TKDRANDDLLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKMEKDI 68
Query: 151 DKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVFLMA 210
++ +E G + +RE +G IL V + + + +F+
Sbjct: 69 QAHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRR-LQAAHLHPIAIFIRP 127
Query: 211 ESETALVERLVERKTESREELLVRIATAREEIKHVKNFDYVVVNAEGKLDVAVKLVESII 270
S ++E E + R + E + + F +V + V+ +I
Sbjct: 128 RSLENVLEINKRITEEQARKAFDRA--TKLEQEFTECFSAIVEGDS--FEEIYHKVKRVI 183
Query: 271 DAEKAKVQ 278
+
Sbjct: 184 EDLSGPYI 191
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 62.0 bits (149), Expect = 3e-12
Identities = 27/184 (14%), Positives = 62/184 (33%), Gaps = 16/184 (8%)
Query: 92 IIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTMID 151
+ +I+GP+GVGK K+L D+ ++ M G + + + LT +
Sbjct: 4 LYIITGPAGVGKSTTCKRLAAQLDNSAYIEGDIINHMVVGGY--RPPWESDELLALTWKN 61
Query: 152 KNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVFLMAE 211
+L L+ + + + + + + D + ++
Sbjct: 62 ITDLTVNFLLAQNDVVLDYIAFPDEAEALAQTV-----------QAKVDDVEIRFIILWT 110
Query: 212 SETALVERLVERKTESREELLVRIATAREEIKHVKNFDYVVVNAEGK-LDVAVKLVESII 270
+ L+ R RK + E++ R EE + + N +V+++
Sbjct: 111 NREELLRRDALRKKD--EQMGERCLELVEEFESKGIDERYFYNTSHLQPTNLNDIVKNLK 168
Query: 271 DAEK 274
+
Sbjct: 169 TNPR 172
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 59.2 bits (142), Expect = 2e-11
Identities = 24/191 (12%), Positives = 58/191 (30%), Gaps = 24/191 (12%)
Query: 92 IIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTMID 151
I+++SG G GK + + L G ++ I
Sbjct: 6 ILLLSGHPGSGKSTIAEALAN--------------------LPGVPKVHFHSDDLWGYIK 45
Query: 152 KNELLEYALVYGDYKG----IPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVF 207
+ + I Y +GY +IL ++ +
Sbjct: 46 HGRIDPWLPQSHQQNRMIMQIAADVAGRYAKEGYFVILDGVVRPDWLPAFTALARPLHYI 105
Query: 208 LMAESETALVERLVERKTESREELLVRIATAREEIKHVKNFDYVVVNAEGKLDVAVKLVE 267
++ + +ER ++R +S + LV + +V+ + D A++
Sbjct: 106 VLRTTAAEAIERCLDRGGDSLSDPLVVADLHSQFADLGAFEHHVLPVSGKDTDQALQSAI 165
Query: 268 SIIDAEKAKVQ 278
+ + + + ++
Sbjct: 166 NALQSGRFRID 176
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 45.9 bits (107), Expect = 1e-06
Identities = 23/180 (12%), Positives = 49/180 (27%), Gaps = 13/180 (7%)
Query: 86 PPPNPLIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEE 145
L++ I G S GK L +L ++ V E + + +
Sbjct: 18 KTAGRLVLGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMDDHIVERAKRYHTGNEEWF 77
Query: 146 FLTMIDKNELLEYALVYGDYKG---------IPKKQIREYMAKGYDIILRVDIQGAQTLR 196
+ + ++ K + + I+G R
Sbjct: 78 EYYYLQWDVEWLTHQLFRQLKASHQLTLPFYDHETDTHSKRTVYLSDSDMIMIEGVFLQR 137
Query: 197 RVLGDSAVFVFLMAESETALVERLVERKTESREELLVRIATAR----EEIKHVKNFDYVV 252
+ FV + R ++ ++ ++ + R A E + +K D V
Sbjct: 138 KEWRPFFDFVVYLDCPREIRFARENDQVKQNIQKFINRYWKAEDYYLETEEPIKRADVVF 197
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 43.9 bits (102), Expect = 5e-06
Identities = 20/179 (11%), Positives = 43/179 (24%), Gaps = 15/179 (8%)
Query: 92 IIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTMID 151
+I+++G S GK +++ L+ + E D
Sbjct: 5 MIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVD-------SLIEAMPLKMQSAEGGIEFD 57
Query: 152 KNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVL----GDSAVFVF 207
+ + + +G + + G II+ G + GD V
Sbjct: 58 ADGGVSIGPEFRALEGAWAEGVVAMARAGARIIIDDVFLGGAAAQERWRSFVGDLDVLWV 117
Query: 208 LMAESETALVERLVERKTESREELLVRIATAREEIKHVKNFDYVVVNAEGKLDVAVKLV 266
+ R R + + +D V + +
Sbjct: 118 GVRCDGAVAEGRETARGDRVAGMAAKQ----AYVVHEGVEYDVEVDTTHKESIECAWAI 172
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 43.4 bits (101), Expect = 8e-06
Identities = 26/199 (13%), Positives = 58/199 (29%), Gaps = 25/199 (12%)
Query: 88 PNPLIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFL 147
P ++ + G G GK + +V + +R +++G +
Sbjct: 4 SKPNVVFVLGGPGSGKGTQCANIVR---DFGWVHLSAGDLLRQEQQSGSKDGEMIATMIK 60
Query: 148 TMIDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRV---DIQGAQTLRRVLGDSAV 204
++ + K I K + + + +
Sbjct: 61 NGEIVPSIV--------TVKLLKNAIDANQGKNFLVDGFPRNEENNNSWEENMKDFVDTK 112
Query: 205 FVFLMAESETALVERLVERKTESR------EELLVRIATAREEIKHVKNF-----DYVVV 253
FV E + +RL++R S E + R T + K V + ++
Sbjct: 113 FVLFFDCPEEVMTQRLLKRGESSGRSDDNIESIKKRFNTFNVQTKLVIDHYNKFDKVKII 172
Query: 254 NAEGKLDVAVKLVESIIDA 272
A ++ VE++ +
Sbjct: 173 PANRDVNEVYNDVENLFKS 191
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 43.4 bits (101), Expect = 8e-06
Identities = 19/190 (10%), Positives = 50/190 (26%), Gaps = 14/190 (7%)
Query: 92 IIVISGPSGVGKDALIKKLRE---SRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLT 148
++V++G GVG + + +V+ S +E +
Sbjct: 3 VVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFGSVMFEVAKEENLVSDRDQMRKMDP 62
Query: 149 MIDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVFL 208
K + + + + G + + + + +
Sbjct: 63 ETQKRIQKMAGRKIAEMAKESPVAVDTHSTVSTPKGY---LPGLPSWVLNELNPDLIIVV 119
Query: 209 MAESETALVERLVERKTE---SREELLVRIATAREEI-----KHVKNFDYVVVNAEGKLD 260
+ L+ R+ + + + +V N G LD
Sbjct: 120 ETTGDEILMRRMSDETRVRDLDTASTIEQHQFMNRCAAMSYGVLTGATVKIVQNRNGLLD 179
Query: 261 VAVKLVESII 270
AV+ + +++
Sbjct: 180 QAVEELTNVL 189
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 42.6 bits (99), Expect = 1e-05
Identities = 30/197 (15%), Positives = 71/197 (36%), Gaps = 14/197 (7%)
Query: 89 NPLIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLT 148
+PL ++ISG GK + ++ + + +R G + +
Sbjct: 2 DPLKVMISGAPASGKGTQCELIKT---KYQLAHISAGDLLRAEIAAGSENG----KRAKE 54
Query: 149 MIDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVFL 208
++K +L+ +V + + + G+ + L L
Sbjct: 55 FMEKGQLVPDEIVVNMV--KERLRQPDAQENGWLLDGYPRSYSQAMALETLEIRPDTFIL 112
Query: 209 MAESETALVERLVERKTESREELLVRIATAREEIKHVKNF---DYVVVNAEGKLDVAVKL 265
+ + LVER+V TE E++ +R+ T + I+ + + V V + +D
Sbjct: 113 LDVPDELLVERVVFDDTE--EKVKLRLETYYQNIESLLSTYENIIVKVQGDATVDAVFAK 170
Query: 266 VESIIDAEKAKVQQRSA 282
++ ++ + K + +
Sbjct: 171 IDELLGSILEKKNEMVS 187
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 41.6 bits (96), Expect = 2e-05
Identities = 29/184 (15%), Positives = 61/184 (33%), Gaps = 20/184 (10%)
Query: 89 NPLIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLT 148
+ I V+ G SG GK A+ ++ + F+ P R E+ +
Sbjct: 5 DHHIYVLMGVSGSGKSAVASEV-AHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPW 63
Query: 149 MIDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVFL 208
+ N+ I ++++ + L R + F++L
Sbjct: 64 LQALNDAAFAMQRTNKVSLIVCSALKKHY---------------RDLLREGNPNLSFIYL 108
Query: 209 MAESETALVERLVERKTESREELLVRIATAREEIKHVKNFDYVVVNAEGKLDVAVKLVES 268
+ + + RL RK + ++ + D +VV+ + L+ +V S
Sbjct: 109 KGDFDV-IESRLKARKGHFFKTQMLVTQFETLQEPGADETDVLVVDIDQPLE---GVVAS 164
Query: 269 IIDA 272
I+
Sbjct: 165 TIEV 168
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 41.5 bits (96), Expect = 4e-05
Identities = 35/200 (17%), Positives = 63/200 (31%), Gaps = 18/200 (9%)
Query: 83 PVCPPPNPLIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVS 142
P P +I + G G GK +KL + FV + +R
Sbjct: 1 PAFSPDQVSVIFVLGGPGAGKGTQCEKLVK---DYSFVHLSAGDLLR---AEQGRAGSQY 54
Query: 143 KEEFLTMIDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDS 202
E I + +++ + + ++ K + A + R
Sbjct: 55 GELIKNCIKEGQIVPQEITLALLRNAISDNVKANKHKFLIDGFPRKMDQAISFER-DIVE 113
Query: 203 AVFVFLMAESETALVERLVERKTESR------EELLVRIATAREEIKHVKNF-----DYV 251
+ F+ E ++ERL+ER S E + R T +E V + V
Sbjct: 114 SKFILFFDCPEDIMLERLLERGKTSGRSDDNIESIKKRFNTFKETSMPVIEYFETKSKVV 173
Query: 252 VVNAEGKLDVAVKLVESIID 271
V + ++ K V+ I
Sbjct: 174 RVRCDRSVEDVYKDVQDAIR 193
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 194
Score = 40.0 bits (92), Expect = 1e-04
Identities = 32/195 (16%), Positives = 58/195 (29%), Gaps = 13/195 (6%)
Query: 90 PLIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTM 149
PL++ + G G GK ++ E R R ++ + +
Sbjct: 1 PLVVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKEGKI 60
Query: 150 IDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVFLM 209
+ + D Q +++ G+ +T+ FV
Sbjct: 61 VPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKA--DVSFVLFF 118
Query: 210 AESETALVERLVERKTESR------EELLVRIATAREEIKHVKNF-----DYVVVNAEGK 258
+ +ER +ER S E L RI T + K + + ++A
Sbjct: 119 DCNNEICIERCLERGKSSGRSDDNRESLEKRIQTYLQSTKPIIDLYEEMGKVKKIDASKS 178
Query: 259 LDVAVKLVESIIDAE 273
+D V I D E
Sbjct: 179 VDEVFDEVVQIFDKE 193
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus
[TaxId: 274]}
Length = 191
Score = 39.9 bits (92), Expect = 1e-04
Identities = 32/187 (17%), Positives = 61/187 (32%), Gaps = 5/187 (2%)
Query: 89 NPLIIVISGPSGVGKDALIKKLRESR----DSLRFVVTATSRPMRPGEENGKDYYFVSKE 144
+P+II I+G G GK + LR D A + + +
Sbjct: 2 HPIIIGITGNIGSGKSTVAALLRSWGYPVLDLDALAARARENKEEELKRLFPEAVVGGRL 61
Query: 145 EFLTMIDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAV 204
+ + L + P+ + V ++ +
Sbjct: 62 DRRALARLVFSDPERLKALEAVVHPEVRRLLMEELSRLEAPLVFLEIPLLFEKGWEGRLH 121
Query: 205 FVFLMAESETALVERLVERKTESREELLVRIATAREEIKHVKNFDYVVVNAEGKLDVAVK 264
L+A V R++ R SREE+L R E + K +V+ N G L+ +
Sbjct: 122 GTLLVAAPLEERVRRVMARSGLSREEVLARERAQMPEEEKRKRATWVLEN-TGSLEDLER 180
Query: 265 LVESIID 271
+++++
Sbjct: 181 ALKAVLA 187
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 38.9 bits (89), Expect = 2e-04
Identities = 22/143 (15%), Positives = 44/143 (30%), Gaps = 9/143 (6%)
Query: 92 IIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTMID 151
II+ G G GK ++ + R E +Y + K+E +
Sbjct: 4 IILTIGCPGSGKSTWAREFIAKNPGFYNINRDDYRQSIMAHEERDEYKYTKKKEGIVTGM 63
Query: 152 KNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVFLMAE 211
+ + + L GD + + + +T + G
Sbjct: 64 QFDTAKSILYGGDSV--------KGVIISDTNLNPERRLAWETFAKEYGWKVEHKVFDVP 115
Query: 212 SETALVERLVERKTESREELLVR 234
LV+R +R T++ ++R
Sbjct: 116 WTE-LVKRNSKRGTKAVPIDVLR 137
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 39.2 bits (90), Expect = 2e-04
Identities = 25/191 (13%), Positives = 56/191 (29%), Gaps = 12/191 (6%)
Query: 92 IIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTMID 151
I +++G GVGK ++ K++E D+ + K Y ++E +
Sbjct: 3 IGIVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATALKLGYAKDRDEMRKLSV 62
Query: 152 KNELLEYALVYGDYKGIPKKQ------------IREYMAKGYDIILRVDIQGAQTLRRVL 199
+ + + IR + V + ++ +L
Sbjct: 63 EKQKKLQIDAAKGIAEEARAGGEGYLFIDTHAVIRTPSGYLPGLPSYVITEINPSVIFLL 122
Query: 200 GDSAVFVFLMAESETALVERLVERKTESREELLVRIATAREEIKHVKNFDYVVVNAEGKL 259
+ + +T ++ E + A + V+VN EG
Sbjct: 123 EADPKIILSRQKRDTTRNRNDYSDESVILETINFARYAATASAVLAGSTVKVIVNVEGDP 182
Query: 260 DVAVKLVESII 270
+A + +
Sbjct: 183 SIAANEIIRSM 193
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 37.2 bits (85), Expect = 8e-04
Identities = 24/193 (12%), Positives = 52/193 (26%), Gaps = 23/193 (11%)
Query: 91 LIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTMI 150
+ IV+ G G GK ++ E +T R + G + +K +
Sbjct: 1 MNIVLMGLPGAGKGTQADRIVE---KYGTPHISTGDMFRAAIQEGTELGVKAKS----FM 53
Query: 151 DKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGD-----SAVF 205
D+ L D I + R + + L L
Sbjct: 54 DQGAL------VPDEVTIGIVRERLSKSDCDNGFLLDGFPRTVPQAEALDQLLADMGRKI 107
Query: 206 VFLMAESETALVERLVERKTESREELLVRIATAREEIKHVKNF-----DYVVVNAEGKLD 260
++ ++ + + R+ + + F V +N + +
Sbjct: 108 EHVLNIQVEKEELIARLTADDNPDTVTNRLEVNMNQTAPLLAFYDSKEVLVNINGQKDIK 167
Query: 261 VAVKLVESIIDAE 273
K ++ I+
Sbjct: 168 DVFKDLDVILQGN 180
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 37.2 bits (85), Expect = 0.001
Identities = 19/199 (9%), Positives = 50/199 (25%), Gaps = 9/199 (4%)
Query: 91 LIIVISGPSGVGKDALIKKLRE--SRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLT 148
+IV+ G GK +KL E R + + Y +
Sbjct: 4 ALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDH 63
Query: 149 MIDKNELLEYALVYGDYKGIPKKQIREYMAKGYDII-------LRVDIQGAQTLRRVLGD 201
+ K + + + + + + L
Sbjct: 64 SVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGLPK 123
Query: 202 SAVFVFLMAESETALVERLVERKTESREELLVRIATAREEIKHVKNFDYVVVNAEGKLDV 261
+ +FL + A + R ++ ++ +V+A ++
Sbjct: 124 PDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKSIEA 183
Query: 262 AVKLVESIIDAEKAKVQQR 280
+ + + + A ++
Sbjct: 184 VHEDIRVLSEDAIATATEK 202
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 36.9 bits (84), Expect = 0.001
Identities = 29/189 (15%), Positives = 56/189 (29%), Gaps = 28/189 (14%)
Query: 88 PNPLIIVISGPSGVGKDALIKKLRESRDSLRFV-VTATSRPMRPGEENGKDYYFVSKEEF 146
P + I+I+G G GK ++ + + D + + V + E + EE
Sbjct: 3 PKGINILITGTPGTGKTSMAEMIAAELDGFQHLEVGKLVKENHFYTEYDTELDTHIIEEK 62
Query: 147 LTMIDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFV 206
+ + ++ + E + + + V
Sbjct: 63 DEDRLLDFMEP--IMVSRGNHVVDYHSSELFPERWFHM---------------------V 99
Query: 207 FLMAESETALVERLVERKTESR----EELLVRIATAREEIKHVKNFDYVVVNAEGKLDVA 262
++ S L ERL +R+ EE + D V+V L+
Sbjct: 100 VVLHTSTEVLFERLTKRQYSEAKRAENMEAEIQCICEEEARDAYEDDIVLVRENDTLEQM 159
Query: 263 VKLVESIID 271
VE I +
Sbjct: 160 AATVEEIRE 168
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia
coli [TaxId: 562]}
Length = 179
Score = 36.8 bits (84), Expect = 0.001
Identities = 23/185 (12%), Positives = 54/185 (29%), Gaps = 12/185 (6%)
Query: 91 LIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTMI 150
+ I++ G GK + + E +T +R ++G + +K+ ++
Sbjct: 1 MRIILLGAPVAGKGTQAQFIMEKYG---IPQISTGDMLRAAVKSGSELGKQAKD----IM 53
Query: 151 DKNELLEYALVYGDYKGIP-----KKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVF 205
D +L+ LV K + + + VL
Sbjct: 54 DAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPD 113
Query: 206 VFLMAESETALVERLVERKTESREELLVRIATAREEIKHVKNFDYVVVNAEGKLDVAVKL 265
++ E V ++ ++ + + N Y V+ +
Sbjct: 114 ELIVDRIVKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRAD 173
Query: 266 VESII 270
+E I+
Sbjct: 174 LEKIL 178
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 36.8 bits (84), Expect = 0.001
Identities = 24/189 (12%), Positives = 60/189 (31%), Gaps = 17/189 (8%)
Query: 91 LIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTMI 150
+ +V+ G G GK +K+ + +T R + G +K+ +
Sbjct: 1 MNLVLMGLPGAGKGTQAEKIVA---AYGIPHISTGDMFRAAMKEGTPLGLQAKQ----YM 53
Query: 151 DKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVFLMA 210
D+ +L+ + ++ ++ G+ + +
Sbjct: 54 DRGDLVP---DEVTIGIVRERLSKDDCQNGFLLDGFPRTVAQAEALETMLADIGRKLDYV 110
Query: 211 ESETALVERLVERKTESREELLV--RIATAREEIKHVKNF-----DYVVVNAEGKLDVAV 263
+ L+ER T E V R+ +++K + +F +N E ++
Sbjct: 111 IHIDVRQDVLMERLTADDNEATVANRLEVNMKQMKPLVDFYEQKGYLRNINGEQDMEKVF 170
Query: 264 KLVESIIDA 272
+ ++
Sbjct: 171 ADIRELLGG 179
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 36.0 bits (82), Expect = 0.002
Identities = 32/186 (17%), Positives = 52/186 (27%), Gaps = 11/186 (5%)
Query: 91 LIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTMI 150
+ +++ GP G GK KL E L +T R E G +K
Sbjct: 1 MRVLLLGPPGAGKGTQAVKLAE---KLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGD 57
Query: 151 DKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVFLMA 210
L LV + + + G V
Sbjct: 58 LVPSDLTNELV---DDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFR 114
Query: 211 ESETALVERLVERKTESREELLVR--IATAREEIKHVKNF---DYVVVNAEGKLDVAVKL 265
SE L+ERL R + ++ + R+E + + V+A G +D
Sbjct: 115 VSEEVLLERLKGRGRADDTDDVILNRMKVYRDETAPLLEYYRDQLKTVDAVGTMDEVFAR 174
Query: 266 VESIID 271
+
Sbjct: 175 ALRALG 180
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 35.4 bits (80), Expect = 0.004
Identities = 18/94 (19%), Positives = 30/94 (31%), Gaps = 1/94 (1%)
Query: 91 LIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTMI 150
++I I G G GK L++KL + + V + P R G+ D + +
Sbjct: 1 MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFP-RYGQSVAADIAAEALHGEHGDL 59
Query: 151 DKNELLEYALVYGDYKGIPKKQIREYMAKGYDII 184
+ L D G I+
Sbjct: 60 ASSVYAMATLFALDRAGAVHTIQGLCRGYDVVIL 93
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 35.3 bits (80), Expect = 0.004
Identities = 31/197 (15%), Positives = 60/197 (30%), Gaps = 20/197 (10%)
Query: 89 NPLIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLT 148
II + G G GK +K+ + + +T +R K
Sbjct: 7 KSKIIFVVGGPGSGKGTQCEKIVQ---KYGYTHLSTGDLLR---AEVSSGSARGKMLSEI 60
Query: 149 MIDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVFL 208
M + ++ + + +KG+ I +
Sbjct: 61 MEKGQLVPLETVLDMLRDAM---VAKVDTSKGFLIDGYPREVKQGEEFERKIGQPTLLLY 117
Query: 209 MAESETALVERLVE------RKTESREELLVRIATAREEIKHVKNF-----DYVVVNAEG 257
+ + +RL++ R ++ E + R+ T + + V F VNAEG
Sbjct: 118 VDAGPETMTKRLLKRGETSGRVDDNEETIKKRLETYYKATEPVIAFYEKRGIVRKVNAEG 177
Query: 258 KLDVAVKLVESIIDAEK 274
+D V + +D K
Sbjct: 178 SVDDVFSQVCTHLDTLK 194
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 35.0 bits (79), Expect = 0.005
Identities = 6/40 (15%), Positives = 15/40 (37%)
Query: 90 PLIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMR 129
P ++I G G GK + + ++ + + +
Sbjct: 9 PFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRN 48
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 34.6 bits (78), Expect = 0.007
Identities = 27/187 (14%), Positives = 52/187 (27%), Gaps = 4/187 (2%)
Query: 92 IIVISGPSGVGKDALIKKLRE--SRDSLRFVVTATSRPMRPGEENGKD-YYFVSKEEFLT 148
+ ++GP GVGK LI K E + T + G G D L+
Sbjct: 3 HVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLS 62
Query: 149 MIDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGA-QTLRRVLGDSAVFVF 207
+ + + G + +G +F
Sbjct: 63 RVGLEPPPGKRECRVGQYVVDLTSFEQLALPVLRNADCSSGPGQRVCVIDEIGKMELFSQ 122
Query: 208 LMAESETALVERLVERKTESREELLVRIATAREEIKHVKNFDYVVVNAEGKLDVAVKLVE 267
L ++ + + + EEI++ K+ V E + + +V
Sbjct: 123 LFIQAVRQTLSTPGTIILGTIPVPKGKPLALVEEIRNRKDVKVFNVTKENRNHLLPDIVT 182
Query: 268 SIIDAEK 274
+ + K
Sbjct: 183 CVQSSRK 189
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 34.4 bits (78), Expect = 0.011
Identities = 24/151 (15%), Positives = 49/151 (32%), Gaps = 8/151 (5%)
Query: 89 NPLIIVISGPSGVGKDALIKKL-RESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFL 147
N L + ++G G GK ++ V P P G ++ L
Sbjct: 53 NTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSP-VTGGSILGDKTRMNDL 111
Query: 148 TMIDKNELLEYALVYGDYKGIPKKQIREYM----AKGYDIILRVDIQGAQTLRRVLGDSA 203
+ + G ++ RE M A GYD+++ + Q+ V
Sbjct: 112 AR--AEAAFIRPVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQSETEVARMVD 169
Query: 204 VFVFLMAESETALVERLVERKTESREELLVR 234
F+ L ++ + + E + +++
Sbjct: 170 CFISLQIAGGGDDLQGIKKGLMEVADLIVIN 200
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 34.2 bits (77), Expect = 0.011
Identities = 8/37 (21%), Positives = 13/37 (35%)
Query: 91 LIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRP 127
+I+V G +G GK L + + V
Sbjct: 1 MIVVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLDT 37
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 33.5 bits (75), Expect = 0.013
Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 86 PPPNPLI-IVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYF 140
PPP+ +V+ G GVGK AL + +S + T + +G
Sbjct: 1 PPPSETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARL 56
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId:
562]}
Length = 210
Score = 33.8 bits (76), Expect = 0.015
Identities = 16/91 (17%), Positives = 30/91 (32%)
Query: 91 LIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTMI 150
IVI G G GK + E+ + L +R + K + + +
Sbjct: 3 KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLLLDIKSVGDE 62
Query: 151 DKNELLEYALVYGDYKGIPKKQIREYMAKGY 181
+ E + Y + + I+ +A G
Sbjct: 63 VITDKAEVLMFYAARVQLVETVIKPALANGT 93
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 33.4 bits (75), Expect = 0.017
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 90 PLIIVISGPSGVGKDALIKKLRE 112
P +I +SG + GK ++ K+ +
Sbjct: 2 PFLIGVSGGTASGKSSVCAKIVQ 24
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 33.1 bits (74), Expect = 0.025
Identities = 8/47 (17%), Positives = 14/47 (29%)
Query: 90 PLIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGK 136
P + I G VGK +K L ++ + +
Sbjct: 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWHVATEPVATWQNIQAAGNQ 48
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4
[TaxId: 10331]}
Length = 333
Score = 33.4 bits (76), Expect = 0.026
Identities = 5/27 (18%), Positives = 10/27 (37%)
Query: 86 PPPNPLIIVISGPSGVGKDALIKKLRE 112
+ I + G G+GK + +
Sbjct: 2 HMVTIVRIYLDGVYGIGKSTTGRVMAS 28
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 32.7 bits (73), Expect = 0.034
Identities = 11/66 (16%), Positives = 23/66 (34%), Gaps = 5/66 (7%)
Query: 92 IIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTMID 151
I I G GK + L++ + V +R N + +E ++ +
Sbjct: 4 KISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARW-----CNVQSTQDEFEELTMSQKN 58
Query: 152 KNELLE 157
+L+
Sbjct: 59 GGNVLQ 64
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 32.9 bits (74), Expect = 0.036
Identities = 31/185 (16%), Positives = 59/185 (31%), Gaps = 23/185 (12%)
Query: 88 PNPLIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEF- 146
N L I++ G GVGK + + + R ++ E S+ F
Sbjct: 30 VNSLTILVMGKGGVGKSSTVNSIIGER---VVSISPF-----QSEGPRPVMVSRSRAGFT 81
Query: 147 LTMIDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRV--------DIQGAQTLRRV 198
L +ID L+E + I K + + + R+ D A+ +
Sbjct: 82 LNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDS 141
Query: 199 LGDSA----VFVFLMAESETALVERLVERKTESREEL--LVRIATAREEIKHVKNFDYVV 252
G + A+ E ++ E L +VR + ++ + V+
Sbjct: 142 FGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLKKDAQASDIPVVL 201
Query: 253 VNAEG 257
+ G
Sbjct: 202 IENSG 206
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 32.1 bits (72), Expect = 0.037
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 86 PPPNPLIIVISGPSGVGKDALIKKLRESRDSLRF 119
PNP ++V G G GK I++ S +
Sbjct: 10 LSPNPEVVVAVGFPGAGKSTFIQEHLVSAGYVHV 43
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type
1, different strains [TaxId: 10298]}
Length = 329
Score = 32.3 bits (73), Expect = 0.061
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 88 PNPLIIVISGPSGVGKDALIKKLRE 112
P L + I GP G+GK + L
Sbjct: 2 PTLLRVYIDGPHGMGKTTTTQLLVA 26
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 32.0 bits (72), Expect = 0.069
Identities = 27/179 (15%), Positives = 49/179 (27%), Gaps = 31/179 (17%)
Query: 88 PNPLIIVISGPSGVGKDALIKKLRESRDSLRFVVT-----ATSRPMRPGEENGKDYYFVS 142
+ L + ++G +G GK + I LR + T N + F
Sbjct: 54 SSVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVFW- 112
Query: 143 KEEFLTMIDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRV--------DIQGAQT 194
G P + + YD + + DI A+
Sbjct: 113 ---------------DLPGIGSTNFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAKA 157
Query: 195 LRRVLGDSAVFVFLMAESETALVERLVERKTESREELLVRIATAREEIKHVKNFDYVVV 253
+ + FV +S+ E E +T +E++L I +
Sbjct: 158 ISMM-KKEFYFVRTKVDSDIT-NEADGEPQTFDKEKVLQDIRLNCVNTFRENGIAEPPI 214
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 31.6 bits (70), Expect = 0.073
Identities = 12/185 (6%), Positives = 46/185 (24%), Gaps = 5/185 (2%)
Query: 92 IIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTMID 151
+ I G GK L+ KL ++ + + + +
Sbjct: 9 TVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYPQMALGHQ 68
Query: 152 KNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVFLMAE 211
+ + + Y+ + +
Sbjct: 69 RYIDYAVRHSHKIAFIDTDFITTQAFCIQYEGKAHPFLDSMIKEYPFDVTILLKNNTEWV 128
Query: 212 SETALVERLVERKTESREELLVRIATAREEIKHVKNFDYVVVNAEGKLDVAVKLVESIID 271
+ +++ + ++ L + + +++ Y + + ++E +++
Sbjct: 129 DDGLRSLGSQKQRQQFQQLLKKLLDKYKVPYIEIESPSY-----LDRYNQVKAVIEKVLN 183
Query: 272 AEKAK 276
E+
Sbjct: 184 EEEIS 188
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 31.3 bits (70), Expect = 0.088
Identities = 20/202 (9%), Positives = 58/202 (28%), Gaps = 22/202 (10%)
Query: 87 PPNPLIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEF 146
L I G G GK + ++ + ++ + + +
Sbjct: 3 SARLLRAAIMGAPGSGKGTVSSRITK---HFELKHLSSGDLL---------RDNMLRGTE 50
Query: 147 LTMIDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFV 206
+ ++ K + + L+ D + + + ++ Q V
Sbjct: 51 IGVLAKTFIDQGKLIPDDVMTRLVLHELKNLTQYNWLLDGFPRTLPQAEALDRAYQIDTV 110
Query: 207 FLMAESETALVERLVERKTESREELLVRIATAREEIKHVKNF-----DYVVVNAEGKLDV 261
+ + +RL +R E ++ R+ + + V + + +
Sbjct: 111 INLNVPFEVIKQRLTDR----PETVVKRLKAYEAQTEPVLEYYRKKGVLETFSGTETNKI 166
Query: 262 AVKLVESIIDAEKAKVQQRSAV 283
V + + + + Q ++V
Sbjct: 167 WPH-VYAFLQTKLPQRSQETSV 187
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 30.8 bits (68), Expect = 0.10
Identities = 8/49 (16%), Positives = 14/49 (28%), Gaps = 4/49 (8%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFV 141
++ G GK L+ L+ R + E + F
Sbjct: 3 LLFLGLDNAGKTTLLHMLKND----RLATLQPTWHPTSEELAIGNIKFT 47
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 31.1 bits (70), Expect = 0.12
Identities = 15/136 (11%), Positives = 32/136 (23%), Gaps = 12/136 (8%)
Query: 89 NPLIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRP-----GEENGKDYYFVSK 143
L I + G G+GK ++ + P+ GE+ Y
Sbjct: 4 GVLRIYLDGAYGIGKTTAAEEFLHHFAITPNRILLIGEPLSYWRNLAGEDAICGIYGTQT 63
Query: 144 EEFLTMIDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTL-------R 196
+ + + P + ++ D +Q + R
Sbjct: 64 RRLNGDVSPEDAQRLTAHFQSLFCSPHAIMHAKISALMDTSTSDLVQVNKEPYKIMLSDR 123
Query: 197 RVLGDSAVFVFLMAES 212
+ + F
Sbjct: 124 HPIASTICFPLSRYLV 139
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 427
Score = 31.2 bits (69), Expect = 0.14
Identities = 17/107 (15%), Positives = 29/107 (27%), Gaps = 13/107 (12%)
Query: 86 PPPNPLIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEE-----NGKDYYF 140
I GP+G GK ++ D++ FV+ S +R G
Sbjct: 21 GFGESNFTSIIGPNGSGKSNMM-------DAISFVLGVRSNHLRSNILKDLIYRGVLNDE 73
Query: 141 VSKE-EFLTMIDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILR 186
S + + N Y + + +R G
Sbjct: 74 NSDDYDNEGAASSNPQSAYVKAFYQKGNKLVELMRIISRNGDTSYKI 120
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 30.5 bits (67), Expect = 0.14
Identities = 6/30 (20%), Positives = 12/30 (40%)
Query: 85 CPPPNPLIIVISGPSGVGKDALIKKLRESR 114
P + + +G S GK + + L +
Sbjct: 11 LPSDTGIEVAFAGRSNAGKSSALNTLTNQK 40
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal
domain {Escherichia coli [TaxId: 562]}
Length = 222
Score = 30.6 bits (68), Expect = 0.15
Identities = 8/34 (23%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 89 NPL-IIVISGPSGVGKDALIKKLRESRDSLRFVV 121
NP+ + +++G G GK L++ + + + V
Sbjct: 1 NPIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAV 34
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 30.7 bits (68), Expect = 0.16
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 90 PLIIVISGPSGVGKDALIKKLRESRDSLR 118
P +IV+ G GK + KKL + +
Sbjct: 2 PTLIVMVGLPARGKTYISKKLTRYLNFIG 30
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 30.9 bits (68), Expect = 0.16
Identities = 7/39 (17%), Positives = 13/39 (33%)
Query: 92 IIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRP 130
I ++ G GK ++IK + + R
Sbjct: 31 ITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEERN 69
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 30.1 bits (66), Expect = 0.18
Identities = 11/48 (22%), Positives = 18/48 (37%), Gaps = 4/48 (8%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYF 140
I+I G G GK ++ +L+ V T + K+ F
Sbjct: 8 ILILGLDGAGKTTILYRLQVG----EVVTTIPTIGFNVETVTYKNLKF 51
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 30.1 bits (66), Expect = 0.18
Identities = 10/49 (20%), Positives = 15/49 (30%)
Query: 92 IIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYF 140
+ I G VGK L+ L + + T+R G
Sbjct: 7 FVAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQI 55
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 30.1 bits (66), Expect = 0.18
Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 8/50 (16%)
Query: 62 VKKAELLRSLEASLGHAFDSNPVCPPPNPLIIVISGPSGVGKDALIKKLR 111
V K+E++ S P I ++G S VGK + I L
Sbjct: 3 VTKSEIVISA-VKPEQ-------YPEGGLPEIALAGRSNVGKSSFINSLI 44
>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase
(ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}
Length = 431
Score = 30.8 bits (68), Expect = 0.19
Identities = 9/37 (24%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 154 ELLEYALVYGDYKGIP--KKQIREYMAKGYDIILRVD 188
+ ++ DY G+P KK + ++MA+ + D
Sbjct: 72 SIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFD 108
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 30.3 bits (67), Expect = 0.21
Identities = 20/226 (8%), Positives = 50/226 (22%), Gaps = 15/226 (6%)
Query: 64 KAELLRSLEASLGHAFDSNPVCPPPNPLIIVISGPSGVGKDALIKKLRESRDSLRFVVTA 123
+ L +LE + P ++ G G GK +L + E V+
Sbjct: 12 ENRLNDNLEELIQGKKAVES------PTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDN 65
Query: 124 T----SRPMRPGEENGKDYYFVSKEEFLTMIDKNELLEYALVYG-----DYKGIPKKQIR 174
P + V + ++ G + G
Sbjct: 66 DTFKQQHPNFDELVKLYEKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIEGTGRTTDVPI 125
Query: 175 EYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVFLMAESETALVERLVERKTESREELLVR 234
+ + + + + ++ + R ++ +
Sbjct: 126 QTATMLQAKGYETKMYVMAVPKINSYLGTIERYETMYADDPMTARATPKQAHDIVVKNLP 185
Query: 235 IATAREEIKHVKNFDYVVVNAEGKLDVAVKLVESIIDAEKAKVQQR 280
+ + + KL +++ K R
Sbjct: 186 TNLETLHKTGLFSDIRLYNREGVKLYSSLETPSISPKETLEKELNR 231
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 29.7 bits (65), Expect = 0.23
Identities = 9/48 (18%), Positives = 12/48 (25%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYF 140
+V+ G GVGK L DS+
Sbjct: 6 VVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESA 53
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 253
Score = 30.1 bits (66), Expect = 0.23
Identities = 11/55 (20%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Query: 58 QTAAVKK-AELLRSLEASLGHAFDSNPVCPPPNPLIIVISGPSGVGKDALIKKLR 111
+V K L + E S ++F ++ GP G+GK +
Sbjct: 19 NKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVA 73
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence
recognition protein Ffh {Archaeon Acidianus ambivalens
[TaxId: 2283]}
Length = 211
Score = 30.1 bits (67), Expect = 0.24
Identities = 11/32 (34%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 80 DSNPVCPPPN-PLIIVISGPSGVGKDALIKKL 110
D P P P +I++ G G GK KL
Sbjct: 1 DKEPKVIPDKIPYVIMLVGVQGTGKATTAGKL 32
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae
[TaxId: 727]}
Length = 205
Score = 29.8 bits (66), Expect = 0.25
Identities = 27/196 (13%), Positives = 58/196 (29%), Gaps = 18/196 (9%)
Query: 90 PLIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTM 149
I+ ++G G GK + + L + R E F
Sbjct: 2 TYIVGLTGGIGSGKTTIANLFTD----LGVPLVDADVVAREVVAKDSPLLSKIVEHFGAQ 57
Query: 150 I--DKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVF-- 205
I ++ EL AL + K + QT L +
Sbjct: 58 ILTEQGELNRAALRERVFNHDEDKLWLNNLLHPAIRERMKQKLAEQTAPYTLFVVPLLIE 117
Query: 206 ---------VFLMAESETALVERLVERKTESREELLVRIATAREEIKHVKNFDYVVVNAE 256
+ ++ S + R +R + E++ + + + + +K D V+ N +
Sbjct: 118 NKLTALCDRILVVDVSPQTQLARSAQRDNNNFEQIQRIMNSQVSQQERLKWADDVINN-D 176
Query: 257 GKLDVAVKLVESIIDA 272
+L + ++ +
Sbjct: 177 AELAQNLPHLQQKVLE 192
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 29.6 bits (65), Expect = 0.25
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 92 IIVISGPSGVGKDALIKKL 110
++ + SG GK L+KKL
Sbjct: 4 LLAFAAWSGTGKTTLLKKL 22
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 286
Score = 30.1 bits (67), Expect = 0.25
Identities = 11/36 (30%), Positives = 14/36 (38%), Gaps = 4/36 (11%)
Query: 90 PLIIVISGPSGVGK----DALIKKLRESRDSLRFVV 121
PL I SGP G GK + L E + +
Sbjct: 27 PLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIG 62
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal
recognition particle receptor FtsY {Thermotoga maritima
[TaxId: 2336]}
Length = 213
Score = 30.1 bits (67), Expect = 0.25
Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 16/104 (15%)
Query: 86 PPPNPLIIVISGPSGVGKDALIKKL----RESRDSLRFVVTATSRPMRPGEENGKDYYFV 141
PP P +I++ G +G GK KL + S+ T R E K +
Sbjct: 7 PPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRA--AAIEQLKIWGER 64
Query: 142 SKEEFLTMIDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIIL 185
++ + D + + +A+ D+++
Sbjct: 65 VGATVISHSEG----------ADPAAVAFDAVAHALARNKDVVI 98
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal
recognition particle receptor FtsY {Escherichia coli
[TaxId: 562]}
Length = 211
Score = 29.6 bits (66), Expect = 0.30
Identities = 19/97 (19%), Positives = 37/97 (38%), Gaps = 10/97 (10%)
Query: 90 PLIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTM 149
P +I++ G +GVGK I KL + +F + G + + E+
Sbjct: 9 PFVILMVGVNGVGKTTTIGKL-----ARQF----EQQGKSVMLAAGDTFRAAAVEQLQVW 59
Query: 150 IDKNELLEYALVYGDY-KGIPKKQIREYMAKGYDIIL 185
+N + A G + I+ A+ D+++
Sbjct: 60 GQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLI 96
>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase
(ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId:
4081]}
Length = 428
Score = 30.0 bits (66), Expect = 0.30
Identities = 21/113 (18%), Positives = 39/113 (34%), Gaps = 30/113 (26%)
Query: 78 AFDSNPVCPPPNPLIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKD 137
A+DS+P P NP ++ G+ ++ L L E
Sbjct: 23 AYDSDPFHPLKNPNGVI---QMGLAENQLCLDLIED------------------------ 55
Query: 138 YYFVSKEEFLTMIDKNELLEYALVYGDYKGIP--KKQIREYMAKGYDIILRVD 188
+ + + + + + DY G+P +K I ++M K +R D
Sbjct: 56 -WIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFD 107
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni
[TaxId: 197]}
Length = 161
Score = 29.1 bits (64), Expect = 0.32
Identities = 18/155 (11%), Positives = 46/155 (29%), Gaps = 3/155 (1%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTMIDK 152
IV G G GK L + L + D + + + + + + +E F ++
Sbjct: 3 IVFIGFMGSGKSTLARALAKDLD--LVFLDSDFLIEQKFNQKVSEIFEQKRENFFREQEQ 60
Query: 153 NELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVFLMAES 212
++ + + + + +R+ D L
Sbjct: 61 KMADFFSSCEKACIATGGGFVNVSNLEKAGFCIYLKADFEYLKKRLDKDEISKRPLFY-D 119
Query: 213 ETALVERLVERKTESREELLVRIATAREEIKHVKN 247
E + ER ++ ++ + + I + +
Sbjct: 120 EIKAKKLYNERLSKYEQKANFILNIENKNIDELLS 154
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli
[TaxId: 562]}
Length = 208
Score = 29.4 bits (65), Expect = 0.35
Identities = 29/198 (14%), Positives = 66/198 (33%), Gaps = 26/198 (13%)
Query: 90 PLIIVISGPSGVGK-----------------DALIKKLRESRDSLRFVVTATSRPMRPGE 132
I+ ++G G GK D + +++ E +
Sbjct: 3 RYIVALTGGIGSGKSTVANAFADLGINVIDADIIARQVVEPGAPALHAIADHFGANMIAA 62
Query: 133 ENGKDYYFVSKEEFLTMIDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGA 192
+ + + F +KN L AL++ + + QI++ + ++ + ++
Sbjct: 63 DGTLQRRALRERIFANPEEKNWL--NALLHPLIQQETQHQIQQATSPYVLWVVPLLVE-- 118
Query: 193 QTLRRVLGDSAVFVFLMAESETALVERLVERKTESREELLVRIATAREEIKHVKNFDYVV 252
+ + + + ET L +R ++R +RE + +A + D V+
Sbjct: 119 ---NSLYKKANRVLVVDVSPETQL-KRTMQRDDVTREHVEQILAAQATREARLAVADDVI 174
Query: 253 VNAEGKLDVAVKLVESII 270
N G D V +
Sbjct: 175 DN-NGAPDAIASDVARLH 191
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 29.2 bits (64), Expect = 0.38
Identities = 12/55 (21%), Positives = 17/55 (30%), Gaps = 1/55 (1%)
Query: 87 PPNPLI-IVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYF 140
P ++ V+ G VGK L+ +V T GK Y
Sbjct: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLL 59
>d3frua2 d.19.1.1 (A:1-178) Fc (IgG) receptor, alpha-1 and alpha-2
domains {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 178
Score = 29.2 bits (65), Expect = 0.42
Identities = 6/21 (28%), Positives = 8/21 (38%), Gaps = 1/21 (4%)
Query: 112 ESRDSLRFVVTATSRPMRPGE 132
E R L + + A S G
Sbjct: 2 EPRLPLMYHLAAVSDL-STGL 21
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Length = 225
Score = 29.3 bits (64), Expect = 0.43
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 92 IIVISGPSGVGKDALIKKL 110
+I I GPSG GK L K +
Sbjct: 5 VITIDGPSGAGKGTLCKAM 23
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId:
1313]}
Length = 223
Score = 29.2 bits (64), Expect = 0.44
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 89 NPLIIVISGPSGVGKDALIKKL 110
+ I I GP+ GK + K +
Sbjct: 2 KTIQIAIDGPASSGKSTVAKII 23
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 28.9 bits (63), Expect = 0.50
Identities = 10/49 (20%), Positives = 17/49 (34%), Gaps = 4/49 (8%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFV 141
I++ G GK ++ KL+ V T + K+ F
Sbjct: 3 ILMVGLDAAGKTTILYKLKLG----EIVTTIPTIGFNVETVEYKNISFT 47
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal
recognition particle receptor FtsY {Thermus aquaticus
[TaxId: 271]}
Length = 207
Score = 28.9 bits (64), Expect = 0.50
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 83 PVCPPPNPLIIVISGPSGVGKDALIKKL 110
PV P ++++ G +GVGK I KL
Sbjct: 1 PVEPKGR--VVLVVGVNGVGKTTTIAKL 26
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 28.5 bits (62), Expect = 0.55
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 93 IVISGPSGVGKDALIKKLRESRDS 116
+++ G GVGK AL + D
Sbjct: 4 VLLLGAPGVGKSALARIFGGVEDG 27
>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of
P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 228
Score = 28.9 bits (64), Expect = 0.59
Identities = 12/58 (20%), Positives = 20/58 (34%), Gaps = 6/58 (10%)
Query: 33 PQRRFHHSLSLT-PHFFSSNLRMNHTQ---TAAV--KKAELLRSLEASLGHAFDSNPV 84
P RRF + S PH S+ + A + + SL++ G +
Sbjct: 1 PHRRFEYKYSFKGPHLVQSDGTVPFWAHAGNAIPSADQIRIAPSLKSQRGSVWTKTKA 58
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 28.5 bits (62), Expect = 0.59
Identities = 23/157 (14%), Positives = 50/157 (31%), Gaps = 5/157 (3%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPG----EENGKDYYFVSKEEFLT 148
I + GP G GK + ++L + ++ F + R G + ++
Sbjct: 5 IFLVGPMGAGKSTIGRQL-AQQLNMEFYDSDQEIEKRTGADVGWVFDLEGEEGFRDREEK 63
Query: 149 MIDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVFL 208
+I++ + ++ + ++ R ++ ++ Q R + +
Sbjct: 64 VINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLARTQRDKKRPLLHV 123
Query: 209 MAESETALVERLVERKTESREELLVRIATAREEIKHV 245
L ER E V I T + K V
Sbjct: 124 ETPPREVLEALANERNPLYEEIADVTIRTDDQSAKVV 160
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 28.4 bits (62), Expect = 0.62
Identities = 15/69 (21%), Positives = 29/69 (42%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTMIDK 152
+VI G VGK L+ +L ++ + T+R + E + F + +
Sbjct: 3 MVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSET 62
Query: 153 NELLEYALV 161
N+L+E +
Sbjct: 63 NDLVERLGI 71
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 369
Score = 29.0 bits (63), Expect = 0.63
Identities = 14/108 (12%), Positives = 29/108 (26%), Gaps = 11/108 (10%)
Query: 87 PPNPLIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEEN----GKDYYFVS 142
I +I G +G GK +L+ D++ + R ++ G ++
Sbjct: 20 EFKEGINLIIGQNGSGKSSLL-------DAILVGLYWPLRIKDIKKDEFTKVGARDTYID 72
Query: 143 KEEFLTMIDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQ 190
+ Y + K++ K I
Sbjct: 73 LIFEKDGTKYRITRRFLKGYSSGEIHAMKRLVGNEWKHVTEPSSKAIS 120
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 28.5 bits (62), Expect = 0.68
Identities = 14/50 (28%), Positives = 19/50 (38%)
Query: 92 IIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFV 141
I I G VGK L+ KL + S+ T+R G Y +
Sbjct: 7 FIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAI 56
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 28.5 bits (62), Expect = 0.68
Identities = 5/22 (22%), Positives = 10/22 (45%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
+++ G GK ++KK
Sbjct: 5 LLMLGLDNAGKTTILKKFNGED 26
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium
extorquens [TaxId: 408]}
Length = 323
Score = 28.7 bits (63), Expect = 0.69
Identities = 23/130 (17%), Positives = 36/130 (27%), Gaps = 6/130 (4%)
Query: 88 PNPLIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFL 147
+ + I+G GVGK I L + V + K
Sbjct: 49 GRAIRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSS--TRTGGSILGDKTRMA 106
Query: 148 TMIDKNELLEYALVYGDYKGIPKKQIREYMA----KGYDIILRVDIQGAQTLRRVLGDSA 203
+ G + RE M G+D+IL + Q+ V +
Sbjct: 107 RLAIDRNAFIRPSPSSGTLGGVAAKTRETMLLCEAAGFDVILVETVGVGQSETAVADLTD 166
Query: 204 VFVFLMAESE 213
F+ LM
Sbjct: 167 FFLVLMLPGA 176
>d3clsd2 c.31.1.2 (D:196-318) C-terminal domain of the electron
transfer flavoprotein alpha subunit {Methylophilus
methylotrophus [TaxId: 17]}
Length = 123
Score = 27.8 bits (62), Expect = 0.80
Identities = 8/36 (22%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPM 128
++S G+G++ +++ RE D + S P+
Sbjct: 9 FIMSIGRGIGEETNVEQFRELADEAGATL-CCSCPI 43
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 28.1 bits (61), Expect = 0.84
Identities = 3/22 (13%), Positives = 8/22 (36%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
+ + G GK + + +
Sbjct: 5 LTLVGLQYSGKTTFVNVIASGQ 26
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 28.1 bits (61), Expect = 0.85
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSLRFVVT 122
++I G SGVGK +L+ + + S ++ T
Sbjct: 5 VIILGDSGVGKTSLMNQYVNKKFSNQYKAT 34
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 28.0 bits (61), Expect = 0.87
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 86 PPPNPLIIVISGPSGVGKDALIKKLRESRDS 116
P + I++ G GK L+K+L S
Sbjct: 12 APDQEVRILLLGLDNAGKTTLLKQLASEDIS 42
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 27.9 bits (61), Expect = 0.90
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 92 IIVISGPSGVGKDALIKKL 110
+ + G GK L++K
Sbjct: 3 VWQVVGYKHSGKTTLMEKW 21
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 28.0 bits (61), Expect = 0.93
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 93 IVISGPSGVGKDALIKKL 110
I+I+G GVGK L+KK+
Sbjct: 3 IIITGEPGVGKTTLVKKI 20
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 28.0 bits (61), Expect = 0.94
Identities = 25/184 (13%), Positives = 58/184 (31%), Gaps = 15/184 (8%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTMIDK 152
+V+ GP G GK L+E AT +R G +K+
Sbjct: 5 MVLIGPPGAGKGTQAPNLQE---RFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLV 61
Query: 153 NELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVFLMAES 212
++ + ++ + P + ++ G+ + + + G +
Sbjct: 62 SDDIMVNMIKDELTNNPACK-NGFILDGF-PRTIPQAEKLDQMLKEQGTPLEKAIELKVD 119
Query: 213 ETALVERLVERKTESREELLVRIATAREEIKHVKNF-----DYVVVNAEGKLDVAVKLVE 267
+ LV R + + L R+A + + + +F + V+A +
Sbjct: 120 DELLVAR-----ITNADALKKRLAAYHAQTEPIVDFYKKTGIWAGVDASQPPATVWADIL 174
Query: 268 SIID 271
+ +
Sbjct: 175 NKLG 178
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 28.0 bits (61), Expect = 0.95
Identities = 10/48 (20%), Positives = 16/48 (33%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYF 140
V+ G VGK L+ ++ +V T G+ Y
Sbjct: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTL 53
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence
recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Length = 207
Score = 28.1 bits (62), Expect = 0.99
Identities = 6/22 (27%), Positives = 9/22 (40%)
Query: 89 NPLIIVISGPSGVGKDALIKKL 110
+ + + G G GK KL
Sbjct: 9 DRNLWFLVGLQGSGKTTTAAKL 30
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum
aerophilum [TaxId: 13773]}
Length = 276
Score = 28.2 bits (61), Expect = 0.99
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Query: 66 ELLRSLEASLGHAFDSNPVCPPPNPLIIVISGPSGVGKDALIK 108
+ L+ L+ LG+ NP P + G G GK ++
Sbjct: 23 QQLQQLDILLGNWLR-NPGHHYPR---ATLLGRPGTGKTVTLR 61
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 28.0 bits (61), Expect = 1.0
Identities = 22/150 (14%), Positives = 45/150 (30%), Gaps = 6/150 (4%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTMIDK 152
I+++G GVGK L K+L + L+++ +G D + +
Sbjct: 7 ILLTGTPGVGKTTLGKELAS-KSGLKYINVGD-LAREEQLYDGYDEEYDCPILDEDRVVD 64
Query: 153 NELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVFLMAES 212
+ E +LR D R+ L
Sbjct: 65 ELDNQMREGGVIVDYHGCDFFPE-RWFHIVFVLRTDTN--VLYERLETRGYNEKKLTDNI 121
Query: 213 ETALV-ERLVERKTESREELLVRIATAREE 241
+ + E +EE++ ++ + + E
Sbjct: 122 QCEIFQVLYEEATASYKEEIVHQLPSNKPE 151
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 28.0 bits (61), Expect = 1.1
Identities = 6/22 (27%), Positives = 9/22 (40%)
Query: 91 LIIVISGPSGVGKDALIKKLRE 112
+I+I G GK L +
Sbjct: 4 KLILIEGLDRTGKTTQCNILYK 25
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 27.9 bits (61), Expect = 1.1
Identities = 13/59 (22%), Positives = 20/59 (33%), Gaps = 6/59 (10%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTMID 151
I+I G S VGK + + + + T + K Y K L + D
Sbjct: 8 ILIIGNSSVGKTSFLFRYADDS------FTPAFVSTVGIDFKVKTIYRNDKRIKLQIWD 60
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 27.7 bits (60), Expect = 1.1
Identities = 11/48 (22%), Positives = 18/48 (37%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYF 140
+ I G +GVGK AL+ + R + T S + +
Sbjct: 5 LAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSM 52
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 27.7 bits (60), Expect = 1.1
Identities = 4/24 (16%), Positives = 10/24 (41%)
Query: 93 IVISGPSGVGKDALIKKLRESRDS 116
++I G GK ++ + +
Sbjct: 18 VIIVGLDNAGKTTILYQFSMNEVV 41
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 27.7 bits (60), Expect = 1.2
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
+V+ G VGK ++I++ +
Sbjct: 5 MVVVGNGAVGKSSMIQRYCKGI 26
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 27.7 bits (60), Expect = 1.2
Identities = 11/48 (22%), Positives = 17/48 (35%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYF 140
IV+ G S GK AL+ + +V T E + +
Sbjct: 5 IVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIEL 52
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 27.7 bits (60), Expect = 1.3
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
+V G GK L+ L++ R
Sbjct: 16 LVFLGLDNAGKTTLLHMLKDDR 37
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 27.5 bits (60), Expect = 1.3
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
IV+ G +GVGK L+++ +
Sbjct: 8 IVLIGNAGVGKTCLVRRFTQGL 29
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 27.6 bits (60), Expect = 1.3
Identities = 7/48 (14%), Positives = 17/48 (35%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYF 140
+ + G GVGK +L+ + + ++ T + +
Sbjct: 5 VAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTL 52
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 27.5 bits (60), Expect = 1.5
Identities = 8/36 (22%), Positives = 18/36 (50%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPM 128
++ G SGVGK + + +++ + +F+ T
Sbjct: 8 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFR 43
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 27.4 bits (60), Expect = 1.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
I++ G SGVGK L+ + E +
Sbjct: 5 ILLIGDSGVGKSCLLVRFVEDK 26
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 27.3 bits (59), Expect = 1.6
Identities = 5/22 (22%), Positives = 13/22 (59%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
+V+ G + VGK +++ + +
Sbjct: 6 LVLLGEAAVGKSSIVLRFVSND 27
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 27.3 bits (59), Expect = 1.7
Identities = 6/22 (27%), Positives = 10/22 (45%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
+V+ G G GK +K+
Sbjct: 6 LVLVGDGGTGKTTFVKRHLTGE 27
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 27.3 bits (59), Expect = 1.7
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
+V+ G GVGK AL +L ++
Sbjct: 6 LVVVGAGGVGKSALTIQLIQNH 27
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 27.3 bits (59), Expect = 1.7
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
++I G SGVGK +L+ + +
Sbjct: 5 VIILGDSGVGKTSLMHRYVNDK 26
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 27.3 bits (59), Expect = 1.7
Identities = 7/27 (25%), Positives = 11/27 (40%)
Query: 88 PNPLIIVISGPSGVGKDALIKKLRESR 114
P + V+ G VGK L+ +
Sbjct: 3 PQAIKCVVVGDGAVGKTCLLISYTTNA 29
>d3cdda1 b.106.1.1 (A:181-348) Baseplate protein gpP {Shewanella
oneidensis [TaxId: 70863]}
Length = 168
Score = 27.1 bits (60), Expect = 1.8
Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Query: 68 LRSLEASL---GHAFDSNPVCPPPNPLIIVISGPSGVGKDALIKKLRESRD 115
+S A G N L+ VI G+ ++ LI + S D
Sbjct: 96 GKSNMAEYTVTGWRIPQTGKLWNINTLVPVIDEIMGLDEEMLIASILFSED 146
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 27.3 bits (59), Expect = 1.8
Identities = 11/48 (22%), Positives = 18/48 (37%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYF 140
+VI G GK L+ + + +V T + E +GK
Sbjct: 5 LVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVEL 52
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 27.2 bits (59), Expect = 1.8
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
+V G VGK +LI +
Sbjct: 3 LVFLGEQSVGKTSLITRFMYDS 24
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 27.3 bits (59), Expect = 1.8
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
+V+ G S VGK +L+ + + +
Sbjct: 9 LVLLGESAVGKSSLVLRFVKGQ 30
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 27.0 bits (59), Expect = 1.9
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSLRFVVTAT 124
+++ G SGVGK ++ + E + F+ T
Sbjct: 9 LLLIGDSGVGKTCVLFRFSEDAFNSTFISTIG 40
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 27.2 bits (59), Expect = 1.9
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 93 IVISGPSGVGKDALIKKLRE 112
I++ G GK ++ KL+
Sbjct: 15 ILMLGLDAAGKTTILYKLKL 34
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli
[TaxId: 562]}
Length = 308
Score = 27.4 bits (60), Expect = 1.9
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 87 PPNPLIIVISGPSGVGKDALIKKLRE 112
P II I+G VGK + L+
Sbjct: 77 QRIPYIISIAGSVAVGKSTTARVLQA 102
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 27.1 bits (59), Expect = 2.0
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
+I G GVGK L+ + E +
Sbjct: 7 YIIIGDMGVGKSCLLHQFTEKK 28
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 27.2 bits (59), Expect = 2.0
Identities = 27/192 (14%), Positives = 60/192 (31%), Gaps = 14/192 (7%)
Query: 88 PNPLIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFL 147
P + V+ GP G GK KL + + AT +R +G + +
Sbjct: 1 PKGVRAVLLGPPGAGKGTQAPKLAK---NFCVCHLATGDMLRAMVASGSELGK---KLKA 54
Query: 148 TMIDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVF 207
TM + + ++ K + + + L + V
Sbjct: 55 TMDAGKLVSDEMVLELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVI 114
Query: 208 LMAESETALVERLVERKTES---REELLVRIATAREEIKHVKNF-----DYVVVNAEGKL 259
+ ++ L+ R+ R S ++ L +R+ + + + + ++A
Sbjct: 115 EFSIPDSLLIRRITGRLIHSDDNKKALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQTP 174
Query: 260 DVAVKLVESIID 271
DV + +
Sbjct: 175 DVVFASILAAFS 186
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 26.8 bits (58), Expect = 2.0
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
+V+ G VGK +L+ + E++
Sbjct: 6 VVLLGEGCVGKTSLVLRYCENK 27
>d1yeya1 c.1.11.2 (A:184-435) RTS beta protein {Xanthomonas
campestris pv. campestris [TaxId: 340]}
Length = 252
Score = 27.2 bits (59), Expect = 2.0
Identities = 10/87 (11%), Positives = 27/87 (31%), Gaps = 7/87 (8%)
Query: 171 KQIREYMAKGYDII-------LRVDIQGAQTLRRVLGDSAVFVFLMAESETALVERLVER 223
+ +E +A G+ I ++ DI+ + R +G + R
Sbjct: 21 RLAKEAVADGFRTIKLKVGANVQDDIRRCRLARAAIGPDIAMAVDANQRWDVGPAIDWMR 80
Query: 224 KTESREELLVRIATAREEIKHVKNFDY 250
+ + + T+ +++
Sbjct: 81 QLAEFDIAWIEEPTSPDDVLGHAAIRQ 107
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 26.8 bits (58), Expect = 2.0
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
+++ G SGVGK L+ + ++
Sbjct: 9 VMLVGDSGVGKTCLLVRFKDGA 30
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 26.8 bits (58), Expect = 2.1
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
++ G +G GK L+ + E +
Sbjct: 8 FLVIGNAGTGKSCLLHQFIEKK 29
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides
[TaxId: 1063]}
Length = 288
Score = 27.2 bits (60), Expect = 2.1
Identities = 6/24 (25%), Positives = 10/24 (41%)
Query: 89 NPLIIVISGPSGVGKDALIKKLRE 112
II ++G SG G + +
Sbjct: 3 KHPIISVTGSSGAGTSTVKHTFDQ 26
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 26.8 bits (58), Expect = 2.1
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
+++ G GVGK AL +
Sbjct: 7 VIMVGSGGVGKSALTLQFMYDE 28
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 27.1 bits (59), Expect = 2.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
I+I G SGVGK +L+ + +
Sbjct: 10 ILIIGESGVGKSSLLLRFTDDT 31
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 27.0 bits (58), Expect = 2.2
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
I I G VGK +L + E +
Sbjct: 7 IAILGYRSVGKSSLTIQFVEGQ 28
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 26.9 bits (58), Expect = 2.2
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
+ + G +GVGK +++ + E
Sbjct: 7 VCLLGDTGVGKSSIMWRFVEDS 28
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 26.9 bits (58), Expect = 2.2
Identities = 5/22 (22%), Positives = 9/22 (40%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
++ G GK L +L +
Sbjct: 3 VLFVGLCDSGKTLLFVRLLTGQ 24
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 26.8 bits (58), Expect = 2.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
+V+ G SGVGK L+ + +
Sbjct: 7 VVLIGDSGVGKSNLLSRFTRNE 28
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 27.0 bits (58), Expect = 2.3
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
I+ +G S VGK LI +L +
Sbjct: 3 IIFAGRSNVGKSTLIYRLTGKK 24
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase
III, N-domain {Escherichia coli [TaxId: 562]}
Length = 207
Score = 27.0 bits (58), Expect = 2.3
Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 15/46 (32%)
Query: 66 ELLRSLEAS-LGHAFDSNPVCPPPNPLIIVISGPSGVGKDALIKKL 110
+L+ S +A HA ++I G+G DALI L
Sbjct: 13 KLVASYQAGRGHHA--------------LLIQALPGMGDDALIYAL 44
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal
domain {Aeropyrum pernix [TaxId: 56636]}
Length = 287
Score = 27.0 bits (58), Expect = 2.5
Identities = 7/29 (24%), Positives = 10/29 (34%)
Query: 82 NPVCPPPNPLIIVISGPSGVGKDALIKKL 110
+ +I G G+GK L K
Sbjct: 38 SGAGLSDVNMIYGSIGRVGIGKTTLAKFT 66
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 26.7 bits (58), Expect = 2.5
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSLRFVVT 122
+++ G SGVGK L+ + + + ++ T
Sbjct: 9 LLLIGNSGVGKSCLLLRFSDDTYTNDYIST 38
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli
[TaxId: 562]}
Length = 222
Score = 26.9 bits (58), Expect = 2.6
Identities = 10/94 (10%), Positives = 24/94 (25%), Gaps = 7/94 (7%)
Query: 87 PPNPLIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEF 146
+ L+ +SG +G GK + + + + S+++
Sbjct: 21 DLDELVTTLSGGNGAGKSTTM-------AAFVTALIPDLTLLHFRNTTEAGATSGSRDKG 73
Query: 147 LTMIDKNELLEYALVYGDYKGIPKKQIREYMAKG 180
L K + L + +
Sbjct: 74 LHGKLKAGVCYSMLDTINSRHQRVVVGVRLQQVA 107
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 26.4 bits (57), Expect = 2.6
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
+V+ G GVGK AL +
Sbjct: 6 VVVLGSGGVGKSALTVQFVTGT 27
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 26.5 bits (57), Expect = 2.7
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
+V+ G GVGK AL + +
Sbjct: 7 LVVVGDGGVGKSALTIQFFQKI 28
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 26.5 bits (57), Expect = 2.8
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
I++ G S VGK L + R
Sbjct: 5 IIVIGDSNVGKTCLTYRFCAGR 26
>d1efva2 c.31.1.2 (A:208-331) C-terminal domain of the electron
transfer flavoprotein alpha subunit {Human (Homo
sapiens) [TaxId: 9606]}
Length = 124
Score = 26.2 bits (58), Expect = 2.8
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPM 128
+V+SG G+ K L + D L V SR
Sbjct: 10 VVVSGGRGLKSGENFKLLYDLADQLHAAV-GASRAA 44
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 26.4 bits (57), Expect = 2.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
+I G +GVGK L+ + + R
Sbjct: 6 YIIIGDTGVGKSCLLLQFTDKR 27
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 26.6 bits (57), Expect = 2.9
Identities = 9/48 (18%), Positives = 19/48 (39%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYF 140
+VI+G GK +L+ L ++ + T+R + +
Sbjct: 4 VVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPL 51
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 26.5 bits (57), Expect = 2.9
Identities = 5/22 (22%), Positives = 10/22 (45%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
+ + G + GK +LI +
Sbjct: 8 LGVLGDARSGKSSLIHRFLTGS 29
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.5 bits (57), Expect = 3.0
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
+V+ G GVGK AL + +S
Sbjct: 8 LVVVGGGGVGKSALTIQFIQSY 29
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 26.5 bits (57), Expect = 3.1
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 93 IVISGPSGVGKDALIKKLRESR 114
+V+ G GVGK AL + +
Sbjct: 6 LVVLGSGGVGKSALTVQFVQGI 27
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 26.3 bits (56), Expect = 3.1
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSL 117
++I G VGK L KL + + ++
Sbjct: 3 VLIVGRPNVGKSTLFNKLVKKKKAI 27
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus
thermophilus [TaxId: 274]}
Length = 387
Score = 26.9 bits (59), Expect = 3.3
Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 3/22 (13%)
Query: 89 NPLIIVISGPSGVGKDALIKKL 110
NP++I G GVGK A+++ L
Sbjct: 45 NPVLI---GEPGVGKTAIVEGL 63
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 26.6 bits (57), Expect = 3.3
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 92 IIVISGPSGVGKDALIKKLR 111
I +I G +G GK +L+ +
Sbjct: 25 INLIIGQNGSGKSSLLDAIL 44
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 26.5 bits (57), Expect = 3.5
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSLRFVVT 122
+++ G GVGK +L+ + ++ + T
Sbjct: 9 VILLGDGGVGKSSLMNRYVTNKFDTQLFHT 38
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 26.5 bits (57), Expect = 3.5
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 92 IIVISGPSGVGKDALIKKLRESR 114
I+I+GP GK +L+ L
Sbjct: 5 SIIIAGPQNSGKTSLLTLLTTDS 27
>d2aeea1 c.61.1.1 (A:1-208) Orotate PRTase {Streptococcus pyogenes
[TaxId: 1314]}
Length = 208
Score = 26.3 bits (57), Expect = 4.3
Identities = 9/74 (12%), Positives = 24/74 (32%), Gaps = 4/74 (5%)
Query: 103 KDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTMIDKNELLEYALVY 162
+ VV + + +N K+ + +T+ + EL+ A +
Sbjct: 131 VLDAAAAASREGADVLGVVAIFTYELPKASQNFKEA----GIKLITLSNYTELIAVAKLQ 186
Query: 163 GDYKGIPKKQIREY 176
G ++++
Sbjct: 187 GYITNDGLHLLKKF 200
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 26.0 bits (56), Expect = 4.5
Identities = 6/24 (25%), Positives = 11/24 (45%)
Query: 93 IVISGPSGVGKDALIKKLRESRDS 116
I++ G GK +K++R
Sbjct: 5 ILLLGAGESGKSTFLKQMRIIHGQ 28
>d1lw7a1 c.26.1.3 (A:57-219) Transcriptional regulator NadR,
NMN-adenylyltransferase domain {Haemophilus influenzae
[TaxId: 727]}
Length = 163
Score = 25.9 bits (56), Expect = 4.8
Identities = 13/103 (12%), Positives = 29/103 (28%), Gaps = 7/103 (6%)
Query: 105 ALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEFLTMIDKNELLEYALVYGD 164
+I + D L +V + + + K + ++ L + + +
Sbjct: 20 NMIYEAFSKVDELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQ-------IFKYQ 72
Query: 165 YKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVF 207
I + E Y + + +TL VF
Sbjct: 73 KNQIFIHHLVEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVF 115
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 26.1 bits (56), Expect = 4.9
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 93 IVISGPSGVGKDALIKKLRE 112
+++ G GK IK++R
Sbjct: 5 LLLLGTGESGKSTFIKQMRI 24
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS
kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 25.8 bits (55), Expect = 5.0
Identities = 6/21 (28%), Positives = 10/21 (47%)
Query: 90 PLIIVISGPSGVGKDALIKKL 110
+ ++G SG GK + L
Sbjct: 19 GCTVWLTGLSGAGKTTVSMAL 39
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 25.7 bits (55), Expect = 5.3
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 93 IVISGPSGVGKDALIKKLRESRDS 116
I+I G G GK ++ +L+
Sbjct: 20 ILILGLDGAGKTTILYRLQIGEVV 43
>d1txka1 b.1.18.2 (A:397-511) Glucans biosynthesis protein G (MdoG,
OpgG), C-terminal domain {Escherichia coli [TaxId: 562]}
Length = 115
Score = 25.2 bits (55), Expect = 5.3
Identities = 6/32 (18%), Positives = 10/32 (31%)
Query: 90 PLIIVISGPSGVGKDALIKKLRESRDSLRFVV 121
V G +R+ ++ FVV
Sbjct: 2 DNAWVQQTRRSTGDVKQSNLIRQPDGTIAFVV 33
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic
domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Length = 258
Score = 25.8 bits (55), Expect = 5.8
Identities = 8/55 (14%), Positives = 19/55 (34%)
Query: 92 IIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEF 146
+ +G G GK ++ + + + F+ + K Y ++ F
Sbjct: 36 VTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGEVAQPKAVYIDTEGTF 90
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Length = 309
Score = 26.0 bits (56), Expect = 6.1
Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Query: 58 QTAAVKK-AELLRSLEASLGHAFDSNPVCPPPNPLIIVISGPSGVGKDALIK 108
Q A + A LR+ + P N I++ GP+GVGK + +
Sbjct: 19 QADAKRAVAIALRNRWRRMQLQEPLRHEVTPKN---ILMIGPTGVGKTEIAR 67
>d1grja1 a.2.1.1 (A:2-79) GreA transcript cleavage protein,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 78
Score = 24.3 bits (53), Expect = 6.2
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 208 LMAESETALVERLVERKTESREELLVRIATAREEIKHVKNFDY 250
+ L E L K+ R E++ IA ARE +N +Y
Sbjct: 5 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEY 47
>d2g39a1 c.124.1.2 (A:3-223) Acetyl-CoA hydrolase (PA5445)
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 221
Score = 25.6 bits (56), Expect = 6.5
Identities = 7/49 (14%), Positives = 21/49 (42%)
Query: 228 REELLVRIATAREEIKHVKNFDYVVVNAEGKLDVAVKLVESIIDAEKAK 276
LL ++ +A E +++ V ++ + A + +++ K +
Sbjct: 6 LPSLLDKVMSAAEAADLIQDGMTVGMSGFTRAGEAKAVPQALAMRAKER 54
>d1exua2 d.19.1.1 (A:4-176) Fc (IgG) receptor, alpha-1 and alpha-2
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 173
Score = 25.4 bits (55), Expect = 6.5
Identities = 8/17 (47%), Positives = 10/17 (58%), Gaps = 1/17 (5%)
Query: 116 SLRFVVTATSRPMRPGE 132
SL + +TA S P PG
Sbjct: 3 SLLYHLTAVSSP-APGT 18
>d2gp4a2 d.334.1.1 (A:1-418) 6-phosphogluconate dehydratase EDD
{Shewanella oneidensis [TaxId: 70863]}
Length = 418
Score = 25.8 bits (56), Expect = 6.6
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 214 TALVERLVERKTESREELLVRIATAREEIKH 244
++ +R++ R SRE L + AR H
Sbjct: 6 QSVTDRIIARSKASREAYLAALNDARNHGVH 36
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 25.3 bits (54), Expect = 6.9
Identities = 4/20 (20%), Positives = 12/20 (60%)
Query: 93 IVISGPSGVGKDALIKKLRE 112
+++ G GK ++K+++
Sbjct: 5 LLLLGAGESGKSTIVKQMKI 24
>d3d37a2 b.106.1.1 (A:179-347) Baseplate protein gpP {Neisseria
meningitidis [TaxId: 487]}
Length = 169
Score = 25.2 bits (55), Expect = 7.0
Identities = 11/69 (15%), Positives = 20/69 (28%), Gaps = 8/69 (11%)
Query: 55 NHTQTAAVKKAELLRS--------LEASLGHAFDSNPVCPPPNPLIIVISGPSGVGKDAL 106
A K+A+ + L ++G + V P + VI G+
Sbjct: 78 ADNLAALQKQAKKQLADWRLEGFTLTITVGGHKTRDGVLWQPGLRVHVIDDEHGIDAVFF 137
Query: 107 IKKLRESRD 115
+ R
Sbjct: 138 LMGRRFMLS 146
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId:
2336]}
Length = 308
Score = 25.8 bits (55), Expect = 7.1
Identities = 19/114 (16%), Positives = 38/114 (33%), Gaps = 9/114 (7%)
Query: 87 PPNPLIIVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPMRPGEENGKDYYFVSKEEF 146
+ + I GP+G GK +I D++++V S+ E + S+
Sbjct: 21 GFSDRVTAIVGPNGSGKSNII-------DAIKWVFGEQSKKELRASEKFDMIFAGSENLP 73
Query: 147 LTMIDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLG 200
EL+ G+ + ++ R Y V ++ + G
Sbjct: 74 PAGSAYVELVFE--ENGEEITVARELKRTGENTYYLNGSPVRLKDIRDRFAGTG 125
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 25.5 bits (55), Expect = 7.7
Identities = 5/19 (26%), Positives = 12/19 (63%)
Query: 93 IVISGPSGVGKDALIKKLR 111
+++ G GK ++K++R
Sbjct: 9 LLLLGAGESGKSTIVKQMR 27
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 25.1 bits (53), Expect = 8.0
Identities = 7/27 (25%), Positives = 10/27 (37%), Gaps = 4/27 (14%)
Query: 90 PLIIVISGPSGVGK----DALIKKLRE 112
I ++G GK AL L +
Sbjct: 6 GFTIFLTGYMNSGKDAIARALQVTLNQ 32
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase
{Bacteriophage T4 [TaxId: 10665]}
Length = 241
Score = 25.3 bits (54), Expect = 8.2
Identities = 12/75 (16%), Positives = 23/75 (30%), Gaps = 5/75 (6%)
Query: 91 LIIVISGPSGVGKDALIKKLRESRDSLRF-----VVTATSRPMRPGEENGKDYYFVSKEE 145
+I +SG GKD + + ++++ + A + N KE
Sbjct: 2 KLIFLSGVKRSGKDTTADFIMSNYSAVKYQLAGPIKDALAYAWGVFAANTDYPCLTRKEF 61
Query: 146 FLTMIDKNELLEYAL 160
D+ L
Sbjct: 62 EGIDYDRETNLNLTK 76
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 25.0 bits (53), Expect = 9.9
Identities = 21/155 (13%), Positives = 46/155 (29%), Gaps = 3/155 (1%)
Query: 93 IVISGPSGVGKDALIKKLRESRDSLRFVVTATSRPM--RPGEENGKDYYFVSKEEFLTMI 150
V+ G G GK + ++L + + + T + + + +
Sbjct: 4 AVLVGLPGSGKSTIGRRLAK-ALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEED 62
Query: 151 DKNELLEYALVYGDYKGIPKKQIREYMAKGYDIILRVDIQGAQTLRRVLGDSAVFVFLMA 210
L G A ++ ++I A+ +RR G++ +
Sbjct: 63 VVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLLAGP 122
Query: 211 ESETALVERLVERKTESREELLVRIATAREEIKHV 245
+ + +R R +R+ T R V
Sbjct: 123 DRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAV 157
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.134 0.368
Gapped
Lambda K H
0.267 0.0435 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,014,481
Number of extensions: 48207
Number of successful extensions: 433
Number of sequences better than 10.0: 1
Number of HSP's gapped: 408
Number of HSP's successfully gapped: 181
Length of query: 284
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 200
Effective length of database: 1,254,276
Effective search space: 250855200
Effective search space used: 250855200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)