Query 023334
Match_columns 283
No_of_seqs 56 out of 58
Neff 1.9
Searched_HMMs 29240
Date Mon Mar 25 05:04:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023334.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023334hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3maj_A DNA processing chain A; 97.9 0.00021 7.3E-09 66.4 13.4 133 140-278 127-266 (382)
2 2iz6_A Molybdenum cofactor car 97.4 0.00043 1.5E-08 57.6 7.9 123 139-280 12-137 (176)
3 3uqz_A DNA processing protein 97.3 0.0042 1.4E-07 56.0 13.3 133 140-278 106-245 (288)
4 2nx2_A Hypothetical protein YP 97.3 0.0045 1.5E-07 51.3 12.4 140 141-282 3-169 (181)
5 1rcu_A Conserved hypothetical 97.2 0.0026 8.9E-08 53.8 10.3 119 140-280 23-148 (195)
6 2a33_A Hypothetical protein; s 97.1 0.00089 3E-08 57.1 6.5 114 138-267 11-127 (215)
7 1weh_A Conserved hypothetical 97.1 0.00089 3.1E-08 54.7 6.0 62 141-204 2-65 (171)
8 1wek_A Hypothetical protein TT 97.0 0.0019 6.4E-08 55.2 8.1 117 135-271 32-153 (217)
9 1t35_A Hypothetical protein YV 97.0 0.0018 6E-08 53.9 7.6 114 141-270 2-118 (191)
10 3qua_A Putative uncharacterize 97.0 0.0022 7.7E-08 54.5 8.2 68 138-207 20-89 (199)
11 1ydh_A AT5G11950; structural g 96.4 0.0087 3E-07 51.2 7.5 124 139-280 8-141 (216)
12 3sbx_A Putative uncharacterize 96.4 0.013 4.4E-07 49.5 8.3 70 136-207 9-80 (189)
13 3gh1_A Predicted nucleotide-bi 93.1 0.3 1E-05 47.2 8.6 69 137-206 144-218 (462)
14 3bq9_A Predicted rossmann fold 92.3 0.51 1.7E-05 45.5 8.9 69 138-207 143-217 (460)
15 4h3v_A Oxidoreductase domain p 66.1 8.6 0.00029 31.9 5.1 51 186-240 67-118 (390)
16 1j0a_A 1-aminocyclopropane-1-c 61.9 25 0.00085 30.0 7.3 75 154-230 54-129 (325)
17 1t1j_A Hypothetical protein; s 58.9 7.9 0.00027 31.0 3.5 40 241-280 75-117 (125)
18 3bbn_B Ribosomal protein S2; s 58.7 13 0.00046 32.3 5.2 48 139-192 63-113 (231)
19 4gqa_A NAD binding oxidoreduct 58.4 90 0.0031 26.9 11.1 53 186-242 88-141 (412)
20 3iix_A Biotin synthetase, puta 55.7 89 0.003 26.0 10.0 82 127-216 88-170 (348)
21 3nra_A Aspartate aminotransfer 54.7 6.8 0.00023 32.2 2.5 40 152-191 81-124 (407)
22 3g7q_A Valine-pyruvate aminotr 49.8 11 0.00038 31.1 3.0 24 169-192 98-121 (417)
23 4fb5_A Probable oxidoreductase 48.2 73 0.0025 26.3 7.8 113 126-242 11-139 (393)
24 3h14_A Aminotransferase, class 47.8 9.5 0.00033 31.4 2.3 22 169-190 91-112 (391)
25 1tv8_A MOAA, molybdenum cofact 46.6 47 0.0016 27.9 6.5 41 128-170 55-95 (340)
26 2dr1_A PH1308 protein, 386AA l 45.2 11 0.00039 30.4 2.4 21 156-176 81-101 (386)
27 3kax_A Aminotransferase, class 45.1 16 0.00054 29.6 3.2 20 171-190 84-103 (383)
28 4dq6_A Putative pyridoxal phos 44.0 16 0.00055 29.6 3.1 20 171-190 92-111 (391)
29 3mc6_A Sphingosine-1-phosphate 43.8 18 0.0006 31.4 3.5 38 154-191 108-148 (497)
30 3ezs_A Aminotransferase ASPB; 42.6 22 0.00077 28.8 3.8 21 156-176 92-114 (376)
31 3dzz_A Putative pyridoxal 5'-p 42.5 23 0.0008 28.7 3.8 22 170-191 86-107 (391)
32 2bkw_A Alanine-glyoxylate amin 42.4 18 0.00061 29.2 3.1 20 171-190 61-80 (385)
33 4hvk_A Probable cysteine desul 41.7 16 0.00055 29.1 2.7 21 156-176 70-94 (382)
34 3vax_A Putative uncharacterize 41.6 15 0.00052 30.0 2.6 20 171-190 82-101 (400)
35 2v9d_A YAGE; dihydrodipicolini 41.3 1.9E+02 0.0065 25.6 11.7 142 109-256 32-192 (343)
36 1iug_A Putative aspartate amin 41.2 16 0.00054 29.1 2.6 13 231-243 137-149 (352)
37 4eb5_A Probable cysteine desul 41.2 21 0.00071 28.8 3.3 21 223-243 143-166 (382)
38 3kgw_A Alanine-glyoxylate amin 41.0 32 0.0011 27.7 4.4 12 232-243 165-176 (393)
39 2z9v_A Aspartate aminotransfer 40.4 17 0.0006 29.5 2.8 19 157-175 70-88 (392)
40 1svv_A Threonine aldolase; str 39.8 17 0.00057 28.9 2.5 20 157-176 77-96 (359)
41 1vjo_A Alanine--glyoxylate ami 39.1 18 0.0006 29.6 2.6 19 172-190 88-106 (393)
42 1eg5_A Aminotransferase; PLP-d 38.2 27 0.00091 28.1 3.5 20 171-190 63-82 (384)
43 2huf_A Alanine glyoxylate amin 37.6 19 0.00065 29.3 2.6 19 157-175 81-99 (393)
44 4a3s_A 6-phosphofructokinase; 37.6 13 0.00045 33.2 1.8 18 173-191 6-25 (319)
45 1c7n_A Cystalysin; transferase 37.6 19 0.00065 29.6 2.6 19 171-189 91-109 (399)
46 4aec_A Cysteine synthase, mito 36.9 53 0.0018 30.4 5.8 53 8-73 42-94 (430)
47 3f9t_A TDC, L-tyrosine decarbo 36.8 32 0.0011 27.5 3.7 20 173-192 90-109 (397)
48 2c0r_A PSAT, phosphoserine ami 36.4 13 0.00046 30.2 1.5 39 154-192 50-91 (362)
49 2qgq_A Protein TM_1862; alpha- 36.3 1.3E+02 0.0044 25.3 7.6 61 127-188 37-106 (304)
50 1r30_A Biotin synthase; SAM ra 36.2 92 0.0031 26.7 6.8 63 127-192 103-168 (369)
51 2q5c_A NTRC family transcripti 35.4 42 0.0014 27.3 4.4 37 126-163 81-117 (196)
52 1kmj_A Selenocysteine lyase; p 35.0 22 0.00076 28.7 2.6 20 170-189 86-105 (406)
53 2r8w_A AGR_C_1641P; APC7498, d 34.6 2.4E+02 0.0081 24.8 11.5 140 109-256 35-194 (332)
54 3qm2_A Phosphoserine aminotran 34.5 37 0.0013 30.1 4.1 37 156-192 75-114 (386)
55 2dgk_A GAD-beta, GADB, glutama 34.5 32 0.0011 29.5 3.7 38 154-191 82-125 (452)
56 2ch1_A 3-hydroxykynurenine tra 34.1 28 0.00096 28.4 3.1 21 156-176 79-99 (396)
57 3hdo_A Histidinol-phosphate am 33.9 35 0.0012 27.7 3.7 21 156-176 92-112 (360)
58 2zc0_A Alanine glyoxylate tran 33.9 17 0.00057 30.0 1.7 21 156-176 108-128 (407)
59 3ele_A Amino transferase; RER0 33.7 23 0.00077 29.1 2.5 21 170-190 100-120 (398)
60 4gs5_A Acyl-COA synthetase (AM 33.6 13 0.00043 31.7 1.0 10 172-181 42-51 (358)
61 1sff_A 4-aminobutyrate aminotr 33.6 19 0.00066 29.8 2.1 10 234-243 222-231 (426)
62 1j32_A Aspartate aminotransfer 33.3 18 0.00063 29.6 1.9 21 156-176 100-120 (388)
63 2fnu_A Aminotransferase; prote 33.1 28 0.00097 28.0 2.9 35 154-189 33-67 (375)
64 2e7j_A SEP-tRNA:Cys-tRNA synth 33.0 19 0.00064 29.0 1.8 21 156-176 79-99 (371)
65 3ffh_A Histidinol-phosphate am 32.0 26 0.00091 28.3 2.6 43 128-176 72-114 (363)
66 2is8_A Molybdopterin biosynthe 31.9 37 0.0013 26.8 3.3 33 151-183 43-76 (164)
67 3lvm_A Cysteine desulfurase; s 31.8 36 0.0012 28.1 3.4 21 223-243 168-191 (423)
68 3euc_A Histidinol-phosphate am 31.5 22 0.00075 28.9 2.0 19 157-175 96-114 (367)
69 3frk_A QDTB; aminotransferase, 31.1 29 0.001 28.4 2.7 20 224-243 130-149 (373)
70 1mkz_A Molybdenum cofactor bio 31.1 37 0.0013 27.1 3.3 51 128-183 32-83 (172)
71 3dyd_A Tyrosine aminotransfera 30.9 25 0.00085 29.9 2.3 21 156-176 128-148 (427)
72 2g2c_A Putative molybdenum cof 30.9 40 0.0014 26.6 3.4 32 152-183 52-83 (167)
73 2rfv_A Methionine gamma-lyase; 30.9 43 0.0015 28.0 3.8 21 223-243 154-177 (398)
74 3c8f_A Pyruvate formate-lyase 30.5 89 0.0031 23.8 5.2 47 128-177 55-107 (245)
75 1rv3_A Serine hydroxymethyltra 30.3 13 0.00043 33.1 0.5 20 172-192 114-133 (483)
76 3zrp_A Serine-pyruvate aminotr 30.2 27 0.00092 28.0 2.3 18 172-190 57-74 (384)
77 3mad_A Sphingosine-1-phosphate 29.9 30 0.001 30.4 2.7 39 154-192 140-183 (514)
78 3hno_A Pyrophosphate-dependent 29.9 23 0.00077 33.1 2.1 18 173-191 8-27 (419)
79 2raf_A Putative dinucleotide-b 29.8 1E+02 0.0036 24.4 5.7 61 140-222 19-79 (209)
80 3t18_A Aminotransferase class 29.6 31 0.0011 28.7 2.6 22 156-177 111-132 (413)
81 2z61_A Probable aspartate amin 29.5 28 0.00096 28.4 2.3 21 156-176 99-119 (370)
82 3ly1_A Putative histidinol-pho 29.4 25 0.00085 28.3 2.0 22 156-177 78-99 (354)
83 1pfk_A Phosphofructokinase; tr 29.4 23 0.00079 31.9 2.0 19 173-192 7-27 (320)
84 1zxx_A 6-phosphofructokinase; 29.4 23 0.00079 31.9 2.0 19 173-192 6-26 (319)
85 2yrr_A Aminotransferase, class 29.1 19 0.00067 28.4 1.3 19 172-190 55-73 (353)
86 3e2y_A Kynurenine-oxoglutarate 29.0 36 0.0012 28.0 2.9 19 171-189 87-105 (410)
87 1b5p_A Protein (aspartate amin 28.8 23 0.00078 29.4 1.7 20 171-190 93-112 (385)
88 3fdb_A Beta C-S lyase, putativ 28.8 33 0.0011 27.7 2.6 21 170-190 82-102 (377)
89 3get_A Histidinol-phosphate am 28.6 40 0.0014 27.3 3.1 21 156-176 92-112 (365)
90 3pzy_A MOG; ssgcid, seattle st 28.6 46 0.0016 26.6 3.4 28 156-183 53-80 (164)
91 1uuy_A CNX1, molybdopterin bio 28.5 43 0.0015 26.4 3.2 32 151-182 52-84 (167)
92 3a2b_A Serine palmitoyltransfe 28.4 34 0.0012 28.2 2.7 20 224-243 179-201 (398)
93 3if2_A Aminotransferase; YP_26 28.2 18 0.00061 30.4 1.0 38 155-192 85-129 (444)
94 2pbq_A Molybdenum cofactor bio 28.2 45 0.0015 26.7 3.3 51 128-182 29-81 (178)
95 1gd9_A Aspartate aminotransfer 28.1 41 0.0014 27.5 3.1 22 170-191 87-109 (389)
96 1v72_A Aldolase; PLP-dependent 28.0 40 0.0014 26.8 3.0 16 173-188 63-78 (356)
97 1m32_A 2-aminoethylphosphonate 27.8 33 0.0011 27.2 2.4 18 172-189 59-76 (366)
98 1iay_A ACC synthase 2, 1-amino 27.6 30 0.001 29.0 2.2 45 127-177 87-139 (428)
99 2uyy_A N-PAC protein; long-cha 27.6 58 0.002 26.8 4.0 45 126-177 11-60 (316)
100 1d2f_A MALY protein; aminotran 27.5 32 0.0011 28.3 2.3 21 170-190 88-108 (390)
101 2cb1_A O-acetyl homoserine sul 27.4 41 0.0014 28.6 3.1 21 223-243 145-168 (412)
102 3rpz_A ADP/ATP-dependent NAD(P 27.2 51 0.0017 28.6 3.7 36 169-205 30-68 (279)
103 1v9v_A KIAA0561 protein; helix 27.0 20 0.00068 29.3 1.0 42 135-176 22-63 (114)
104 3ml1_A NAPA, periplasmic nitra 26.5 89 0.0031 30.5 5.6 35 119-153 87-126 (802)
105 3ffr_A Phosphoserine aminotran 26.5 29 0.001 27.6 1.9 36 155-190 45-82 (362)
106 1c4k_A Protein (ornithine deca 26.3 22 0.00074 34.7 1.3 30 157-188 200-229 (730)
107 7aat_A Aspartate aminotransfer 26.2 45 0.0015 27.5 3.1 16 175-190 102-117 (401)
108 3nx3_A Acoat, acetylornithine 26.2 60 0.0021 26.8 3.8 40 152-192 77-116 (395)
109 3piu_A 1-aminocyclopropane-1-c 26.1 35 0.0012 28.8 2.4 22 155-176 120-141 (435)
110 3rq1_A Aminotransferase class 26.0 37 0.0013 28.2 2.5 53 119-177 75-133 (418)
111 3f0h_A Aminotransferase; RER07 25.9 35 0.0012 27.6 2.3 21 156-176 81-101 (376)
112 3fvs_A Kynurenine--oxoglutarat 25.9 48 0.0016 27.4 3.2 22 170-191 92-113 (422)
113 3nnk_A Ureidoglycine-glyoxylat 25.8 53 0.0018 26.8 3.3 19 158-176 76-94 (411)
114 2xzm_B RPS0E; ribosome, transl 25.8 34 0.0012 30.1 2.4 55 139-203 65-123 (241)
115 3g0t_A Putative aminotransfera 25.6 39 0.0013 28.1 2.6 12 156-167 115-126 (437)
116 3c1a_A Putative oxidoreductase 25.6 2.8E+02 0.0097 22.8 9.4 93 139-242 9-114 (315)
117 1b9h_A AHBA synthase, protein 25.5 81 0.0028 25.8 4.4 20 157-176 64-84 (388)
118 3gtz_A Putative translation in 25.1 17 0.00057 27.9 0.2 15 168-182 19-33 (124)
119 3kbq_A Protein TA0487; structu 24.9 60 0.002 26.7 3.5 48 128-183 27-76 (172)
120 3kjj_A NMB1025 protein; YJGF p 24.8 20 0.00068 27.8 0.6 16 167-182 24-39 (128)
121 1o69_A Aminotransferase; struc 24.8 43 0.0015 28.0 2.7 19 171-189 49-67 (394)
122 2r2n_A Kynurenine/alpha-aminoa 24.7 46 0.0016 28.1 2.9 21 156-176 118-138 (425)
123 2dou_A Probable N-succinyldiam 24.5 56 0.0019 26.7 3.3 21 156-176 97-117 (376)
124 3dr4_A Putative perosamine syn 24.5 45 0.0015 27.5 2.7 42 128-177 61-103 (391)
125 1t3i_A Probable cysteine desul 24.4 42 0.0014 27.4 2.5 13 231-243 185-197 (420)
126 1yiz_A Kynurenine aminotransfe 24.2 35 0.0012 28.5 2.1 21 156-176 111-131 (429)
127 2x5d_A Probable aminotransfera 24.1 44 0.0015 27.8 2.6 20 156-175 109-128 (412)
128 2q7w_A Aspartate aminotransfer 24.0 65 0.0022 26.3 3.6 20 156-175 104-125 (396)
129 2o1b_A Aminotransferase, class 23.9 43 0.0015 28.1 2.6 20 156-175 119-138 (404)
130 1v2d_A Glutamine aminotransfer 23.9 42 0.0014 27.5 2.4 20 156-175 88-107 (381)
131 1qwk_A Aldose reductase, aldo- 23.8 2.8E+02 0.0097 23.4 7.7 44 146-192 21-64 (317)
132 4d9b_A D-cysteine desulfhydras 23.7 3.4E+02 0.012 23.3 8.2 54 156-210 67-121 (342)
133 2okj_A Glutamate decarboxylase 23.7 36 0.0012 29.9 2.2 38 154-191 133-173 (504)
134 2nap_A Protein (periplasmic ni 23.6 1.3E+02 0.0045 28.1 6.0 34 119-152 75-113 (723)
135 3k12_A Uncharacterized protein 23.5 15 0.00052 28.0 -0.3 16 168-183 16-31 (122)
136 1mdo_A ARNB aminotransferase; 23.5 45 0.0015 27.2 2.5 41 128-176 44-85 (393)
137 3nyt_A Aminotransferase WBPE; 23.5 48 0.0016 27.2 2.7 20 224-243 129-148 (367)
138 3p1t_A Putative histidinol-pho 23.4 42 0.0014 26.6 2.3 20 223-242 140-162 (337)
139 3i4j_A Aminotransferase, class 23.4 1E+02 0.0036 25.8 4.8 38 154-191 73-111 (430)
140 2zyj_A Alpha-aminodipate amino 23.3 34 0.0012 28.3 1.8 43 128-176 79-121 (397)
141 3dtt_A NADP oxidoreductase; st 23.3 57 0.002 26.4 3.1 32 138-176 17-48 (245)
142 3rfq_A Pterin-4-alpha-carbinol 23.3 64 0.0022 26.7 3.4 33 151-183 71-103 (185)
143 3dxv_A Alpha-amino-epsilon-cap 23.2 40 0.0014 28.5 2.2 39 154-192 87-127 (439)
144 3uwc_A Nucleotide-sugar aminot 23.0 42 0.0014 27.2 2.2 18 226-243 133-150 (374)
145 1u08_A Hypothetical aminotrans 22.9 50 0.0017 27.1 2.7 20 156-175 101-120 (386)
146 3bwn_A AT1G70560, L-tryptophan 22.9 53 0.0018 27.8 3.0 24 155-178 100-127 (391)
147 3b46_A Aminotransferase BNA3; 22.9 34 0.0012 29.4 1.7 18 172-189 121-138 (447)
148 2x5f_A Aspartate_tyrosine_phen 22.7 35 0.0012 28.7 1.8 22 156-177 123-144 (430)
149 2bwn_A 5-aminolevulinate synth 22.6 42 0.0014 27.7 2.2 21 223-243 183-206 (401)
150 4dg8_A PA1221; ANL superfamily 22.4 28 0.00097 32.1 1.3 10 172-181 169-178 (620)
151 3nyq_A Malonyl-COA ligase; A/B 22.4 29 0.00098 30.6 1.2 10 172-181 160-169 (505)
152 3rg2_A Enterobactin synthase c 22.4 27 0.00091 31.7 1.0 10 172-181 189-198 (617)
153 1w3i_A EDA, 2-keto-3-deoxy glu 22.3 3.6E+02 0.012 22.9 11.6 92 115-207 6-104 (293)
154 1y5e_A Molybdenum cofactor bio 22.2 63 0.0021 25.5 3.1 51 128-183 35-86 (169)
155 3ot9_A Phosphopentomutase; alk 22.2 2.8E+02 0.0095 25.9 7.8 109 113-270 99-236 (399)
156 3ojc_A Putative aspartate/glut 22.1 44 0.0015 27.7 2.3 36 122-157 99-138 (231)
157 1xi9_A Putative transaminase; 22.0 37 0.0013 28.3 1.7 21 156-176 111-131 (406)
158 3kxw_A Saframycin MX1 syntheta 21.8 28 0.00096 30.7 1.1 10 172-181 172-181 (590)
159 3tb6_A Arabinose metabolism tr 21.8 2.5E+02 0.0085 21.6 6.4 33 136-169 133-165 (298)
160 3ktd_A Prephenate dehydrogenas 21.7 2.2E+02 0.0077 25.1 6.8 69 140-223 8-91 (341)
161 3cai_A Possible aminotransfera 21.6 67 0.0023 26.3 3.2 11 232-242 182-192 (406)
162 3l44_A Glutamate-1-semialdehyd 21.5 1.7E+02 0.006 24.5 5.8 38 155-192 97-134 (434)
163 1elu_A L-cysteine/L-cystine C- 21.4 49 0.0017 26.7 2.3 19 171-189 78-96 (390)
164 2e7z_A Acetylene hydratase AHY 21.3 1.3E+02 0.0045 28.3 5.5 51 120-176 75-134 (727)
165 1ax4_A Tryptophanase; tryptoph 21.3 57 0.0019 27.6 2.8 44 128-179 81-131 (467)
166 3dvo_A Sgrair restriction enzy 21.2 1.8E+02 0.0063 27.2 6.3 69 140-225 141-226 (338)
167 1vp4_A Aminotransferase, putat 21.2 36 0.0012 28.7 1.6 21 156-176 119-139 (425)
168 2x3l_A ORN/Lys/Arg decarboxyla 21.2 16 0.00054 32.1 -0.7 22 156-177 82-103 (446)
169 2o0r_A RV0858C (N-succinyldiam 21.1 41 0.0014 28.0 1.9 20 156-175 96-115 (411)
170 3ipl_A 2-succinylbenzoate--COA 21.0 29 0.001 30.1 1.0 10 172-181 168-177 (501)
171 3iwt_A 178AA long hypothetical 20.9 67 0.0023 25.1 3.0 51 128-183 44-95 (178)
172 3tcm_A Alanine aminotransferas 20.9 99 0.0034 27.4 4.4 40 151-190 136-178 (500)
173 1fg7_A Histidinol phosphate am 20.8 46 0.0016 27.4 2.1 44 128-177 63-107 (356)
174 1v25_A Long-chain-fatty-acid-C 20.7 33 0.0011 30.5 1.3 10 172-181 181-190 (541)
175 3a9z_A Selenocysteine lyase; P 20.7 51 0.0017 27.5 2.4 36 156-191 64-100 (432)
176 3hp4_A GDSL-esterase; psychrot 20.7 2.4E+02 0.0083 20.3 5.9 64 140-203 2-75 (185)
177 3op7_A Aminotransferase class 20.7 21 0.00072 29.1 0.0 52 119-176 58-111 (375)
178 3m5u_A Phosphoserine aminotran 20.6 46 0.0016 29.2 2.2 31 160-190 57-90 (361)
179 3r44_A Fatty acyl COA syntheta 20.5 29 0.00098 30.6 0.8 10 172-181 175-184 (517)
180 3ivr_A Putative long-chain-fat 20.4 28 0.00097 30.3 0.8 10 172-181 165-174 (509)
181 4fuq_A Malonyl COA synthetase; 20.4 28 0.00096 30.6 0.8 10 172-181 160-169 (503)
182 3oqb_A Oxidoreductase; structu 20.4 3.7E+02 0.013 22.7 7.7 88 186-279 75-167 (383)
183 4dll_A 2-hydroxy-3-oxopropiona 20.3 95 0.0033 26.2 4.0 33 137-176 28-60 (320)
184 3ni2_A 4-coumarate:COA ligase; 20.3 31 0.0011 30.5 1.0 10 172-181 183-192 (536)
185 2f48_A Diphosphate--fructose-6 20.3 42 0.0014 32.5 2.0 19 173-192 77-97 (555)
186 2pju_A Propionate catabolism o 20.1 77 0.0026 26.8 3.4 87 126-226 93-197 (225)
187 2epj_A Glutamate-1-semialdehyd 20.0 75 0.0026 26.8 3.3 36 154-189 97-132 (434)
No 1
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=97.85 E-value=0.00021 Score=66.40 Aligned_cols=133 Identities=21% Similarity=0.161 Sum_probs=104.6
Q ss_pred CceEEEecccccchhHHHHHHHHHHHHHhhCCeeeecCCCCchHHHHHhhhhhcCCCceeEeecccccCC-ChhHHHHHH
Q 023334 140 PRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQ-PPESQELLA 218 (283)
Q Consensus 140 ~rrIa~lGsRhvp~~hq~LIEllsyALvl~gNhi~TSGA~GTNAAvIRGaLrAe~P~lLTViLPQSL~kQ-p~ESqelLe 218 (283)
.+.|||.|||++.---.+..+-+++.|+..|-.|++-+|-|+-+|+-||||.+ . --.||+-.+++- |++.+++.+
T Consensus 127 ~~~vAIVGsR~~s~yG~~~a~~l~~~La~~g~~VVSGlA~GID~~AH~~AL~~-g---TIaVLg~Gld~~YP~~n~~L~~ 202 (382)
T 3maj_A 127 RPMIAIVGSRNASGAGLKFAGQLAADLGAAGFVVISGLARGIDQAAHRASLSS-G---TVAVLAGGHDKIYPAEHEDLLL 202 (382)
T ss_dssp SCEEEEECCSSCCHHHHHHHHHHHHHHHHHTCEEEECCCTTHHHHHHHHHTTT-C---EEEECSSCTTSCSSGGGHHHHH
T ss_pred CceEEEEeCCCCCHHHHHHHHHHHHHHHHCCcEEEeCCccCHHHHHHHHHHhC-C---eEEEECCCcCccCCHhhHHHHH
Confidence 57899999999999999999999999999998888888999999999999997 3 445889999985 889999999
Q ss_pred HHhh-----HhcCCCCCCCChHHHHhhhhHHHHhhhceeeEE-EeeCchHHHHHHHHHHhccCeeE
Q 023334 219 KVKT-----VIEKPHNDHLPLIEASRLCNMDIISHVQQVICF-AFHDSRLLMETCQEAKNLRKIVT 278 (283)
Q Consensus 219 ~V~h-----lVE~PeND~LpL~eAS~lCN~eIIsrcqQlICF-AFHDS~tLLetC~eAe~~~KiVT 278 (283)
++.. +=|-|-+.. |...---.-|+=|..-++=+|.. |-..|-+ |-|++.|-+++|-|-
T Consensus 203 ~I~~~~G~liSE~ppg~~-p~~~~Fp~RNRiIagLS~~vvVvEA~~kSGs-liTA~~Ale~gR~Vf 266 (382)
T 3maj_A 203 DIIQTRGAAISEMPLGHV-PRGKDFPRRNRLISGASVGVAVIEAAYRSGS-LITARRAADQGREVF 266 (382)
T ss_dssp HHHHTTCEEEECSCTTCC-CCTTHHHHHHHHHHHHCSCEEECCCCTTCTH-HHHHHHHHHHTCCEE
T ss_pred HHHHhCCcEEecCCCCCC-CCccccHHHHHHHHHhCCceEEEecCCCCcH-HHHHHHHHHhCCcEE
Confidence 9854 224444332 33322335687777788877765 4556777 568999999998774
No 2
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=97.42 E-value=0.00043 Score=57.59 Aligned_cols=123 Identities=15% Similarity=0.115 Sum_probs=81.6
Q ss_pred CCceEEEecccc--cchhHHHHHHHHHHHHHhhCCeeeecCC-CCchHHHHHhhhhhcCCCceeEeecccccCCChhHHH
Q 023334 139 GPRAIGFFGTRN--MGFMHQELIEILSYALVITKNHIYTSGA-SGTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQE 215 (283)
Q Consensus 139 G~rrIa~lGsRh--vp~~hq~LIEllsyALvl~gNhi~TSGA-~GTNAAvIRGaLrAe~P~lLTViLPQSL~kQp~ESqe 215 (283)
..++||++|||+ ..=-..+..+-+.+.|+..|..|+|=|+ .|.=.|+-|||+.+ .-.-+ =|||+. +++.+..-
T Consensus 12 ~~~~VaV~Gs~~~g~~~~~~~~A~~lg~~La~~g~~lVsGGg~~Gim~aa~~gAl~~-gG~ti-gVlP~~-~~~~~~~~- 87 (176)
T 2iz6_A 12 RKPIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGRSLGVMHEAMKGAKEA-GGTTI-GVLPGP-DTSEISDA- 87 (176)
T ss_dssp CCCEEEEECCCGGGCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSHHHHHHHHHHHT-TCCEE-EEECC------CCTT-
T ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCccCHhHHHHHHHHHc-CCEEE-EEeCch-hhhhhccC-
Confidence 457899999999 6666788999999999999999999999 99999999999998 43333 357876 33221100
Q ss_pred HHHHHhhHhcCCCCCCCChHHHHhhhhHHHHhhhceeeEEEeeCchHHHHHHHHHHhccCeeEEe
Q 023334 216 LLAKVKTVIEKPHNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLF 280 (283)
Q Consensus 216 lLe~V~hlVE~PeND~LpL~eAS~lCN~eIIsrcqQlICFAFHDS~tLLetC~eAe~~~KiVTLf 280 (283)
+..++ .-++++ -=|+-|+..+|=+|.+-= -+-||-|.. +|-+++|-|-++
T Consensus 88 ----~~~~i---~~~~~~------~Rk~~m~~~sda~IvlpG-g~GTL~E~~-~al~~~kpV~~l 137 (176)
T 2iz6_A 88 ----VDIPI---VTGLGS------ARDNINALSSNVLVAVGM-GPGTAAEVA-LALKAKKPVVLL 137 (176)
T ss_dssp ----CSEEE---ECCCCS------SSCCCCGGGCSEEEEESC-CHHHHHHHH-HHHHTTCCEEEE
T ss_pred ----CceeE---EcCCHH------HHHHHHHHhCCEEEEecC-CccHHHHHH-HHHHhCCcEEEE
Confidence 00010 011121 125667777888887753 466765554 555677776554
No 3
>3uqz_A DNA processing protein DPRA; SAM and rossmann fold, DNA processing protein A, DNA binding; HET: DNA SO4; 2.70A {Streptococcus pneumoniae}
Probab=97.29 E-value=0.0042 Score=55.99 Aligned_cols=133 Identities=21% Similarity=0.180 Sum_probs=97.2
Q ss_pred CceEEEecccccchhHHHHHHHHHHHHHhhCCeeeecC-CCCchHHHHHhhhhhcCCCceeEeecccccC-CChhHHHHH
Q 023334 140 PRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSG-ASGTNAAVIRGALRAERPDLLTVILPQSLKK-QPPESQELL 217 (283)
Q Consensus 140 ~rrIa~lGsRhvp~~hq~LIEllsyALvl~gNhi~TSG-A~GTNAAvIRGaLrAe~P~lLTViLPQSL~k-Qp~ESqelL 217 (283)
.+.|||.|||++.---.+..+-++..|+ .| ..++|| |-|+-+++-||||.+..+ --.||+..|++ -|++.+++.
T Consensus 106 ~~~vaIVGsR~~s~yg~~~a~~l~~~La-~~-~~VVSGlA~GID~~AH~~aL~~~g~--TIaVl~~Gld~~YP~~n~~L~ 181 (288)
T 3uqz_A 106 FPKVAVVGSRACSKQGAKSVEKVIQGLE-NE-LVIVSGLAKGIDTAAHMAALQNGGK--TIAVIGTGLDVFYPKANKRLQ 181 (288)
T ss_dssp SCEEEEEECTTCCHHHHHHHHHHHHTTT-TC-SEEEECCCTTHHHHHHHHHHHHTCC--EEEECSSCTTCCSSGGGHHHH
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHHHHHh-hh-heEecCcccCHHHHHHHHHHhcCCC--EEEEecccccccCchhhHHHH
Confidence 3689999999999999999999999885 44 667777 689999999999998432 23479999987 477888887
Q ss_pred HHHhh----HhcCCCCCCCChHHHHhhhhHHHHhhhceeeEE-EeeCchHHHHHHHHHHhccCeeE
Q 023334 218 AKVKT----VIEKPHNDHLPLIEASRLCNMDIISHVQQVICF-AFHDSRLLMETCQEAKNLRKIVT 278 (283)
Q Consensus 218 e~V~h----lVE~PeND~LpL~eAS~lCN~eIIsrcqQlICF-AFHDS~tLLetC~eAe~~~KiVT 278 (283)
+++.+ +=|-|-+.. |...---.=|+=|-.-++=+|-. |=..|-+| -|++.|-+++|-|-
T Consensus 182 ~~i~~~GlliSE~ppg~~-p~~~~Fp~RNRiIagLS~~~vVvEA~~~SGsl-iTA~~Ale~gR~Vf 245 (288)
T 3uqz_A 182 DYIGNDHLVLSEYGPGEQ-PLKFHFPARNRIIAGLCRGVIVAEAKMRSGSL-ITCERAMEEGRDVF 245 (288)
T ss_dssp HHHHHHSEEEESSCTTCC-CCTTHHHHHHHHHHHHCSEEEEESCCTTCHHH-HHHHHHHHTTCEEE
T ss_pred HHhcccCcEeeccCCCCC-ccccccHHHHHHHHHcCCeEEEEecCCCChHH-HHHHHHHHcCCeEE
Confidence 77654 335554332 33332333477777777776655 44556665 69999999999764
No 4
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=97.28 E-value=0.0045 Score=51.32 Aligned_cols=140 Identities=14% Similarity=0.067 Sum_probs=88.8
Q ss_pred ceEEEecccccch------------hHHHHHHHHHHHHHhhC-CeeeecCCCCchHHHHHhhhhh--cCC-CceeEeecc
Q 023334 141 RAIGFFGTRNMGF------------MHQELIEILSYALVITK-NHIYTSGASGTNAAVIRGALRA--ERP-DLLTVILPQ 204 (283)
Q Consensus 141 rrIa~lGsRhvp~------------~hq~LIEllsyALvl~g-Nhi~TSGA~GTNAAvIRGaLrA--e~P-~lLTViLPQ 204 (283)
++|||-|-|..++ +-..|-+.|...+ -.| -+++|+||.|+=..+..-|+.. +-| =.|+|++|=
T Consensus 3 ~~i~vTGhR~~~l~if~~~~~~~~~ik~~L~~~l~~l~-~~G~~~~isgga~G~D~~aae~vl~lk~~y~~i~L~~v~Pf 81 (181)
T 2nx2_A 3 KVLAITGYKPFELGIFKQDDKALYYIKKAIKNRLIAFL-DEGLEWILISGQLGVELWAAEAAYDLQEEYPDLKVAVITPF 81 (181)
T ss_dssp CEEEEEECCHHHHTCCSSCCHHHHHHHHHHHHHHHHHH-TTTCCEEEECCCTTHHHHHHHHHHTTTTTCTTCEEEEEESS
T ss_pred eEEEEEeCCCccccCccccchHHHHHHHHHHHHHHHHH-hCCCcEEEECCCccHHHHHHHHHHHhccccCCceEEEEecc
Confidence 6999999998873 2333333333333 245 6999999999999998888773 346 468999993
Q ss_pred ccc--CCChhHHHHHHHHhhHhc----CCCCCCCChHHHHhhhhHHHHhhhceeeEEEe-eCchHHHHHHHHHHhc----
Q 023334 205 SLK--KQPPESQELLAKVKTVIE----KPHNDHLPLIEASRLCNMDIISHVQQVICFAF-HDSRLLMETCQEAKNL---- 273 (283)
Q Consensus 205 SL~--kQp~ESqelLe~V~hlVE----~PeND~LpL~eAS~lCN~eIIsrcqQlICFAF-HDS~tLLetC~eAe~~---- 273 (283)
.=- +=+++.|+.+..++.-.. -++. +..=+.+-+.=|+-+|.+||-+|+|-- +-.----.+.+.|+++
T Consensus 82 ~~~~~~w~~~~~~~y~~ll~~aD~v~~l~~~-~y~~~~~~~~rn~~mvd~sD~liavyDg~~~GgT~~~v~~A~~~~~~~ 160 (181)
T 2nx2_A 82 YEQEKNWKEPNKEQYEAVLAQADYEASLTHR-PYESPLQFKQKNQFFIDKSDGLLLLYDPEKEGSPKYMLGTAEKRREQD 160 (181)
T ss_dssp BCTTTTSCHHHHHHHHHHHHHCSEEEESSSS-BCCCHHHHHHHHHHHHHHSSEEEEECCTTTCCTTHHHHHHHHHHHHHH
T ss_pred cchhhCCCHHHHHHHHHHHHhCCeEEecccC-CCCCHHHHHHHHHHHHHHCCEEEEEEcCCCCCCHHHHHHHHHHhcccc
Confidence 322 226778877776655422 2221 111245666779999999999998853 1111233444555554
Q ss_pred cCeeEEeec
Q 023334 274 RKIVTLFYL 282 (283)
Q Consensus 274 ~KiVTLfYf 282 (283)
++-|.++-+
T Consensus 161 ~~pv~~I~~ 169 (181)
T 2nx2_A 161 GYPIYFITM 169 (181)
T ss_dssp CCCEEEECH
T ss_pred CCeEEEEcH
Confidence 577776644
No 5
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=97.19 E-value=0.0026 Score=53.84 Aligned_cols=119 Identities=16% Similarity=0.173 Sum_probs=82.9
Q ss_pred CceEEEeccccc-ch----hHHHHHHHHHHHHHhhCCeeeecCCCCchHHHHHhhhhhcCCCceeEeecccccCCChhHH
Q 023334 140 PRAIGFFGTRNM-GF----MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQ 214 (283)
Q Consensus 140 ~rrIa~lGsRhv-p~----~hq~LIEllsyALvl~gNhi~TSGA~GTNAAvIRGaLrAe~P~lLTViLPQSL~kQp~ESq 214 (283)
.++||++|+|+. .= -..+..+-+.+.|+..|..|+|-|+.|.=.|+-|||+.+. -. ..-|||. ++.+
T Consensus 23 m~~IaV~Gss~~~~~~~~~~~~~~A~~lg~~LA~~G~~vVsGg~~GiM~aa~~gAl~~G-G~-~iGVlP~--e~~~---- 94 (195)
T 1rcu_A 23 MKKVVVVGYSGPVNKSPVSELRDICLELGRTLAKKGYLVFNGGRDGVMELVSQGVREAG-GT-VVGILPD--EEAG---- 94 (195)
T ss_dssp CCEEEEEECCSCTTSTTTGGGHHHHHHHHHHHHHTTCEEEECCSSHHHHHHHHHHHHTT-CC-EEEEEST--TCCC----
T ss_pred CCeEEEEecCCCCCccccHHHHHHHHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHHHcC-Cc-EEEEeCC--cccC----
Confidence 468999999876 22 5678889999999999999999999999999999999983 33 3445787 2111
Q ss_pred HHHHHHhhHhcCCCCCCCChH--HHHhhhhHHHHhhhceeeEEEeeCchHHHHHHHHHHhccCeeEEe
Q 023334 215 ELLAKVKTVIEKPHNDHLPLI--EASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLF 280 (283)
Q Consensus 215 elLe~V~hlVE~PeND~LpL~--eAS~lCN~eIIsrcqQlICFAFHDS~tLLetC~eAe~~~KiVTLf 280 (283)
++. .++++. .--..=|.-|+..+|=+|.+-= -+-||-|.. +|-.++|-|-++
T Consensus 95 -----------~~~-~~~~~~~~~~f~~Rk~~m~~~sda~IvlpG-G~GTL~E~~-eal~~~kPV~ll 148 (195)
T 1rcu_A 95 -----------NPY-LSVAVKTGLDFQMRSFVLLRNADVVVSIGG-EIGTAIEIL-GAYALGKPVILL 148 (195)
T ss_dssp -----------CTT-CSEEEECCCCHHHHHHHHHTTCSEEEEESC-CHHHHHHHH-HHHHTTCCEEEE
T ss_pred -----------CCC-cceeeecCCCHHHHHHHHHHhCCEEEEecC-CCcHHHHHH-HHHhcCCCEEEE
Confidence 111 233322 1111237888999998888853 367766655 455577777666
No 6
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=97.09 E-value=0.00089 Score=57.12 Aligned_cols=114 Identities=20% Similarity=0.151 Sum_probs=73.5
Q ss_pred cCCceEEEe-cccccch-hHHHHHHHHHHHHHhhCCeeeecCCC-CchHHHHHhhhhhcCCCceeEeecccccCCChhHH
Q 023334 138 QGPRAIGFF-GTRNMGF-MHQELIEILSYALVITKNHIYTSGAS-GTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQ 214 (283)
Q Consensus 138 ~G~rrIa~l-GsRhvp~-~hq~LIEllsyALvl~gNhi~TSGA~-GTNAAvIRGaLrAe~P~lLTViLPQSL~kQp~ESq 214 (283)
..-++||++ |||+..= -..+..+-+.+.|+..|..|+|-||. |.=.|+-|||+.+. -.- .=|||..+.. +|.
T Consensus 11 ~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg~~GiM~aa~~gAl~~G-G~t-iGVlP~~~~~--~e~- 85 (215)
T 2a33_A 11 SKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGG-RHV-IGIIPKTLMP--REL- 85 (215)
T ss_dssp CSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTT-CCE-EEEEESSCC-------
T ss_pred CCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCChhhHhHHHHHHHHHcC-CcE-EEEcchHhcc--hhh-
Confidence 345689999 9999643 35788999999999999999999996 99999999999983 333 3347887754 111
Q ss_pred HHHHHHhhHhcCCCCCCCChHHHHhhhhHHHHhhhceeeEEEeeCchHHHHHH
Q 023334 215 ELLAKVKTVIEKPHNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETC 267 (283)
Q Consensus 215 elLe~V~hlVE~PeND~LpL~eAS~lCN~eIIsrcqQlICFAFHDS~tLLetC 267 (283)
-.+ .+.|.+.-+++ .-=|.-|+..+|=+|++-= -.-||-|-.
T Consensus 86 --~~~--~~~~~~~~~~f------~~Rk~~~~~~sda~VvlpG-G~GTLdElf 127 (215)
T 2a33_A 86 --TGE--TVGEVRAVADM------HQRKAEMAKHSDAFIALPG-GYGTLEELL 127 (215)
T ss_dssp --------CCEEEEESSH------HHHHHHHHHTCSEEEECSC-CHHHHHHHH
T ss_pred --ccC--CCCceeecCCH------HHHHHHHHHhCCEEEEeCC-CCchHHHHH
Confidence 000 01122222222 1236667778887777642 244554444
No 7
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=97.06 E-value=0.00089 Score=54.71 Aligned_cols=62 Identities=13% Similarity=0.032 Sum_probs=53.3
Q ss_pred ceEEEecccccch--hHHHHHHHHHHHHHhhCCeeeecCCCCchHHHHHhhhhhcCCCceeEeecc
Q 023334 141 RAIGFFGTRNMGF--MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQ 204 (283)
Q Consensus 141 rrIa~lGsRhvp~--~hq~LIEllsyALvl~gNhi~TSGA~GTNAAvIRGaLrAe~P~lLTViLPQ 204 (283)
|+||++|+|+.+- -+.+..+-+.+.|+..|..|+|=|+.|.=.|+-|||+.+.. . ..=|+|.
T Consensus 2 ~~V~V~gs~~~~~~~~~~~~A~~lg~~La~~g~~lV~Ggg~GiM~aa~~gAl~~gG-~-tiGV~~~ 65 (171)
T 1weh_A 2 RLLAVFVSSRLSPEDPLYARWVRYGEVLAEEGFGLACGGYQGGMEALARGVKAKGG-L-VVGVTAP 65 (171)
T ss_dssp EEEEEECCSSCCTTSHHHHHHHHHHHHHHHTTEEEEECCSSTHHHHHHHHHHHTTC-C-EEECCCG
T ss_pred CEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCChhhHHHHHHHHHHHcCC-c-EEEEecc
Confidence 5799999999987 67889999999999999999999999999999999999833 2 3334565
No 8
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=97.05 E-value=0.0019 Score=55.17 Aligned_cols=117 Identities=19% Similarity=0.106 Sum_probs=78.4
Q ss_pred HHhcCCceEEEecccccch--hHHHHHHHHHHHHHhhCCeeeecCCCCchHHHHHhhhhhcCCCceeEeecccccCCChh
Q 023334 135 IQQQGPRAIGFFGTRNMGF--MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQPPE 212 (283)
Q Consensus 135 IQq~G~rrIa~lGsRhvp~--~hq~LIEllsyALvl~gNhi~TSGA~GTNAAvIRGaLrAe~P~lLTViLPQSL~kQp~E 212 (283)
+..-|-+.||++|+|+.+- -+.+..+-+.+.|+..|..|+|=|+.|.=.||-|||+.+ .-.-+-|+ |+ + |.|
T Consensus 32 l~~~~~~~VaV~Gss~~~~~~~~~~~A~~lg~~La~~g~~lVsGGg~GiM~aa~~gAl~~-gG~~iGV~-~~-~---P~~ 105 (217)
T 1wek_A 32 LSELQVPLVSVFGSARFGEGHPAYEAGYRLGRALAEAGFGVVTGGGPGVMEAVNRGAYEA-GGVSVGLN-IE-L---PHE 105 (217)
T ss_dssp HHHCCSCEEEEECCSSCCTTSHHHHHHHHHHHHHHHHTCEEEECSCSHHHHHHHHHHHHT-TCCEEEEE-EC-C---TTC
T ss_pred HhhcCCCEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCChhhHHHHHHHHHHHc-CCCEEEEe-eC-C---cch
Confidence 4555656899999999986 667899999999999999999999999999999999998 43333332 32 1 221
Q ss_pred HHHHHHHHhhHhcCCCCCCCChH---HHHhhhhHHHHhhhceeeEEEeeCchHHHHHHHHHH
Q 023334 213 SQELLAKVKTVIEKPHNDHLPLI---EASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAK 271 (283)
Q Consensus 213 SqelLe~V~hlVE~PeND~LpL~---eAS~lCN~eIIsrcqQlICFAFHDS~tLLetC~eAe 271 (283)
...|..++.. .--.-=|.-|+..+|=+|++- =-+-||-|-.+...
T Consensus 106 -------------~~~~~~~t~~~~~~~f~~Rk~~m~~~sda~Ivlp-GG~GTL~El~e~lt 153 (217)
T 1wek_A 106 -------------QKPNPYQTHALSLRYFFVRKVLFVRYAVGFVFLP-GGFGTLDELSEVLV 153 (217)
T ss_dssp -------------CCCCSCCSEEEEESCHHHHHHHHHHTEEEEEECS-CCHHHHHHHHHHHH
T ss_pred -------------hhccccCCcCcccCCHHHHHHHHHHhCCEEEEeC-CCCcHHHHHHHHHH
Confidence 1122222211 001122666778888777765 34566666555443
No 9
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=97.02 E-value=0.0018 Score=53.92 Aligned_cols=114 Identities=11% Similarity=0.065 Sum_probs=75.7
Q ss_pred ceEEEecccccc--hhHHHHHHHHHHHHHhhCCeeeecCCC-CchHHHHHhhhhhcCCCceeEeecccccCCChhHHHHH
Q 023334 141 RAIGFFGTRNMG--FMHQELIEILSYALVITKNHIYTSGAS-GTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQELL 217 (283)
Q Consensus 141 rrIa~lGsRhvp--~~hq~LIEllsyALvl~gNhi~TSGA~-GTNAAvIRGaLrAe~P~lLTViLPQSL~kQp~ESqelL 217 (283)
|+||++|+|+.+ =-+.+..+-+.+.|+..|..|+|-|+. |.=.|+-|||+.+. - ...=|+|..|... +
T Consensus 2 ~~V~V~gss~~~~~~~~~~~A~~lg~~La~~g~~lV~GGg~~GiM~aa~~gA~~~g-G-~~iGv~p~~l~~~-----e-- 72 (191)
T 1t35_A 2 KTICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGGSRVGLMGTIADAIMENG-G-TAIGVMPSGLFSG-----E-- 72 (191)
T ss_dssp CEEEEECCSSCCSSTHHHHHHHHHHHHHHHTTCEEEECCCCSHHHHHHHHHHHTTT-C-CEEEEEETTCCHH-----H--
T ss_pred CEEEEEECCCCCCChHHHHHHHHHHHHHHHCCCEEEECCCcccHHHHHHHHHHHcC-C-eEEEEeCchhccc-----c--
Confidence 689999999974 456778999999999999999999997 99999999999983 3 3444678877621 1
Q ss_pred HHHhhHhcCCCCCCCChHHHHhhhhHHHHhhhceeeEEEeeCchHHHHHHHHH
Q 023334 218 AKVKTVIEKPHNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEA 270 (283)
Q Consensus 218 e~V~hlVE~PeND~LpL~eAS~lCN~eIIsrcqQlICFAFHDS~tLLetC~eA 270 (283)
+.++.-+.+....--..=|.-++..+|=+|++-= -.=||-|-.+..
T Consensus 73 ------~~~~~~~~~~~~~~~~~Rk~~~~~~sda~IvlPG-G~GTl~El~e~l 118 (191)
T 1t35_A 73 ------VVHQNLTELIEVNGMHERKAKMSELADGFISMPG-GFGTYEELFEVL 118 (191)
T ss_dssp ------HTTCCCSEEEEESHHHHHHHHHHHHCSEEEECSC-CHHHHHHHHHHH
T ss_pred ------cccCCCCccccCCCHHHHHHHHHHHCCEEEEeCC-CccHHHHHHHHH
Confidence 0111111111111112236677788887776642 245665555544
No 10
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=97.00 E-value=0.0022 Score=54.49 Aligned_cols=68 Identities=13% Similarity=0.131 Sum_probs=56.3
Q ss_pred cCCceEEEe-cccccchhHHHHHHHHHHHHHhhCCeeeecCCC-CchHHHHHhhhhhcCCCceeEeeccccc
Q 023334 138 QGPRAIGFF-GTRNMGFMHQELIEILSYALVITKNHIYTSGAS-GTNAAVIRGALRAERPDLLTVILPQSLK 207 (283)
Q Consensus 138 ~G~rrIa~l-GsRhvp~~hq~LIEllsyALvl~gNhi~TSGA~-GTNAAvIRGaLrAe~P~lLTViLPQSL~ 207 (283)
.+.++||++ |+|...--+.+..+-+.+.|+..|..|+|-|+. |.=.||-|||+++. -...-|+|+.|.
T Consensus 20 ~~~~~v~Vfggs~~~~~~~~~~A~~lg~~La~~g~~lV~GGG~~GlM~a~~~gA~~~G--G~viGv~p~~l~ 89 (199)
T 3qua_A 20 DRQWAVCVYCASGPTHPELLELAAEVGSSIAARGWTLVSGGGNVSAMGAVAQAARAKG--GHTVGVIPKALV 89 (199)
T ss_dssp -CCCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEECCBCSHHHHHHHHHHHHTT--CCEEEEEEGGGT
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCccCHHHHHHHHHHHcC--CcEEEEeCchhh
Confidence 567899999 578666677788899999999999999999986 99999999999883 244557888874
No 11
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=96.39 E-value=0.0087 Score=51.15 Aligned_cols=124 Identities=18% Similarity=0.156 Sum_probs=77.2
Q ss_pred CCceEEEe-cccccc-hhHHHHHHHHHHHHHhhCCeeeecCCC-CchHHHHHhhhhhcCCCceeEeecccccCCChhHHH
Q 023334 139 GPRAIGFF-GTRNMG-FMHQELIEILSYALVITKNHIYTSGAS-GTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQE 215 (283)
Q Consensus 139 G~rrIa~l-GsRhvp-~~hq~LIEllsyALvl~gNhi~TSGA~-GTNAAvIRGaLrAe~P~lLTViLPQSL~kQp~ESqe 215 (283)
.-++||++ |+|... =-+.+.-+-+.+.|+..|..|+|-|+. |.=.||-|||+.+.. ...=|+|..+..
T Consensus 8 ~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~~GlM~aa~~gA~~~GG--~~iGv~p~~l~~------- 78 (216)
T 1ydh_A 8 RFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGL--HVLGIIPKALMP------- 78 (216)
T ss_dssp SCSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTTC--CEEEEEEGGGHH-------
T ss_pred CCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCcccHhHHHHHHHHHcCC--cEEEEechhcCc-------
Confidence 34689999 678753 456778888999999999999999997 999999999999833 344456765421
Q ss_pred HHHHHhhHhcCCCCCC--CChHHHHhhhhHHHHhhhceeeEEEeeCchHHHHHHHHH-----HhccCeeEEe
Q 023334 216 LLAKVKTVIEKPHNDH--LPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEA-----KNLRKIVTLF 280 (283)
Q Consensus 216 lLe~V~hlVE~PeND~--LpL~eAS~lCN~eIIsrcqQlICFAFHDS~tLLetC~eA-----e~~~KiVTLf 280 (283)
.|.+.|.. +....--..=|.-++.++|=+|++-= -.=||-|-.+.. ...+|-|-|+
T Consensus 79 --------~e~~~~~~~~~~~~~~~~~Rk~~~~~~sda~I~lpG-G~GTLdElfE~lt~~qlg~~~kPvvll 141 (216)
T 1ydh_A 79 --------IEISGETVGDVRVVADMHERKAAMAQEAEAFIALPG-GYGTMEELLEMITWSQLGIHKKTVGLL 141 (216)
T ss_dssp --------HHCCSSCCSEEEEESSHHHHHHHHHHHCSEEEECSC-SHHHHHHHHHHHHHHHHTSCCCEEEEE
T ss_pred --------cccccCCCCcccccCCHHHHHHHHHHhCCEEEEeCC-CccHHHHHHHHHHHHHhcccCCCEEEe
Confidence 12233321 11111112336777888887777642 134444433221 1245555554
No 12
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=96.37 E-value=0.013 Score=49.50 Aligned_cols=70 Identities=14% Similarity=0.109 Sum_probs=53.4
Q ss_pred HhcCCceEEEecc-cccchhHHHHHHHHHHHHHhhCCeeeecCCC-CchHHHHHhhhhhcCCCceeEeeccccc
Q 023334 136 QQQGPRAIGFFGT-RNMGFMHQELIEILSYALVITKNHIYTSGAS-GTNAAVIRGALRAERPDLLTVILPQSLK 207 (283)
Q Consensus 136 Qq~G~rrIa~lGs-Rhvp~~hq~LIEllsyALvl~gNhi~TSGA~-GTNAAvIRGaLrAe~P~lLTViLPQSL~ 207 (283)
-..|.++||++|+ |...=-+.+.-+-+.+.|+..|+.|+|-|+. |.=.||-|||+.+. - ...=|+|+.|.
T Consensus 9 ~~~~~~~I~Vfg~s~~~~~~~~~~A~~lg~~la~~g~~lv~GGG~~GlM~a~~~ga~~~G-G-~viGv~p~~l~ 80 (189)
T 3sbx_A 9 DEPGRWTVAVYCAAAPTHPELLELAGAVGAAIAARGWTLVWGGGHVSAMGAVSSAARAHG-G-WTVGVIPKMLV 80 (189)
T ss_dssp ----CCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEECCBCSHHHHHHHHHHHTTT-C-CEEEEEETTTT
T ss_pred CCCCCeEEEEEEeCCCCChHHHHHHHHHHHHHHHCCCEEEECCCccCHHHHHHHHHHHcC-C-cEEEEcCchhh
Confidence 3467899999985 5344455678888999999999999999987 99999999999883 2 34456788764
No 13
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A
Probab=93.15 E-value=0.3 Score=47.21 Aligned_cols=69 Identities=14% Similarity=0.197 Sum_probs=55.6
Q ss_pred hcCCceEEEecccccchhHHHHHHHHHHHHHhhCCeeeecCCCCchHHHHHhhhhhc------CCCceeEeecccc
Q 023334 137 QQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAE------RPDLLTVILPQSL 206 (283)
Q Consensus 137 q~G~rrIa~lGsRhvp~~hq~LIEllsyALvl~gNhi~TSGA~GTNAAvIRGaLrAe------~P~lLTViLPQSL 206 (283)
...++.+.++||....=-+-+..+-+.++|+..|..|+|-|+.|.=-|+.+||..+. .-..+-| +|+.|
T Consensus 144 ~r~~~IvV~cGSs~~~p~yye~A~eLGr~LA~~G~~LVtGGG~GLMeAa~aGA~~a~a~qr~aGG~vIGI-iP~~L 218 (462)
T 3gh1_A 144 GATPNLVVCWGGHSINEVEYQYTREVGHELGLRELNICTGCGPGAMEGPMKGAAVGHAKQRYSEYRYLGL-TEPSI 218 (462)
T ss_dssp TCCSCEEEEECCSSCCHHHHHHHHHHHHHHHHTTCEEEECCSSGGGTHHHHHHHHHHHHTTCTTCCEEEE-ECTTT
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcHHHHHHHHHHHHHhccccccCCCeEEEE-ccchh
Confidence 356666779999887778888899999999999999999999999999999998874 3334444 56654
No 14
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=92.27 E-value=0.51 Score=45.46 Aligned_cols=69 Identities=14% Similarity=0.240 Sum_probs=52.6
Q ss_pred cCCceEEEecccccchhHHHHHHHHHHHHHhhCCeeeecCCCCchHHHHHhhhhh------cCCCceeEeeccccc
Q 023334 138 QGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRA------ERPDLLTVILPQSLK 207 (283)
Q Consensus 138 ~G~rrIa~lGsRhvp~~hq~LIEllsyALvl~gNhi~TSGA~GTNAAvIRGaLrA------e~P~lLTViLPQSL~ 207 (283)
..++.++++|+....=-.-+..+-+.+.|+..|..|+|-|+.|.=-|+++||..+ ..-..+= |+|+.|.
T Consensus 143 ~~~~ivVv~GSs~~~~~~Ye~A~eLGr~LA~~G~~LVtGGG~GlMEaa~aGA~~a~s~qr~~GG~vIG-IiP~~L~ 217 (460)
T 3bq9_A 143 EEPNMVVCWGGHSINEIEYKYTKDVGYHIGLRGLNICTGCGPGAMKGPMKGATIGHAKQRVEGGRYLG-LTEPGII 217 (460)
T ss_dssp CCSCEEEEECCSSCCHHHHHHHHHHHHHHHHTTCEEEECCSSGGGTHHHHHHHHHHHHTTCSSCCEEE-EECTTTT
T ss_pred CCCCEEEEEcCCCCCCHHHHHHHHHHHHHHHCCCEEEeCCcHHHhhHHHhhHHhhcccccCCCCEEEE-EeChhhh
Confidence 4456788999987654445788889999999999999999999998889999877 2333344 4576643
No 15
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=66.08 E-value=8.6 Score=31.89 Aligned_cols=51 Identities=24% Similarity=0.233 Sum_probs=36.4
Q ss_pred HHhhhhhcCCCceeEeecccccCCChhHHHHHHHHhh-HhcCCCCCCCChHHHHhh
Q 023334 186 IRGALRAERPDLLTVILPQSLKKQPPESQELLAKVKT-VIEKPHNDHLPLIEASRL 240 (283)
Q Consensus 186 IRGaLrAe~P~lLTViLPQSL~kQp~ESqelLe~V~h-lVE~PeND~LpL~eAS~l 240 (283)
.+-.|..+++|.+.|..|-.+-. +-..+.|+.=+| ++|||=- +.+.||-+|
T Consensus 67 ~~~ll~~~~iDaV~I~tP~~~H~--~~~~~al~aGkhVl~EKPla--~t~~ea~~l 118 (390)
T 4h3v_A 67 WRTLLERDDVQLVDVCTPGDSHA--EIAIAALEAGKHVLCEKPLA--NTVAEAEAM 118 (390)
T ss_dssp HHHHTTCTTCSEEEECSCGGGHH--HHHHHHHHTTCEEEEESSSC--SSHHHHHHH
T ss_pred HHHHhcCCCCCEEEEeCChHHHH--HHHHHHHHcCCCceeecCcc--cchhHHHHH
Confidence 45567777899999999987643 334555666566 6899964 578898777
No 16
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=61.90 E-value=25 Score=29.95 Aligned_cols=75 Identities=17% Similarity=0.040 Sum_probs=45.1
Q ss_pred hHHHHHHHHHHHHHhhCCeeeecCCCCchHHHHHhhhhhcCCCceeEeecccccCCChhHHHHHHHH-hhHhcCCCCC
Q 023334 154 MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQELLAKV-KTVIEKPHND 230 (283)
Q Consensus 154 ~hq~LIEllsyALvl~gNhi~TSGA~GTNAAvIRGaLrAe~P~lLTViLPQSL~kQp~ESqelLe~V-~hlVE~PeND 230 (283)
--..+..++..|....-.+|+|+|++.-|.+.-=.+.-+..-=-.+|++|... +|++-.++++.. .+|+.-+.+.
T Consensus 54 K~R~~~~~i~~a~~~G~~~vv~~G~ssGN~g~alA~~a~~~G~~~~iv~p~~~--~~~~k~~~~~~~GA~v~~~~~~~ 129 (325)
T 1j0a_A 54 KIRKLEYLLGDALSKGADVVITVGAVHSNHAFVTGLAAKKLGLDAILVLRGKE--ELKGNYLLDKIMGIETRVYDAKD 129 (325)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCTTCHHHHHHHHHHHHTTCEEEEEEESCC--CSCHHHHHHHHTTCEEEEESCCS
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcCCcchHHHHHHHHHHHHhCCcEEEEECCCC--CCCchHHHHHHCCCEEEEeCcch
Confidence 33445566777777666789999865555543333333324445789999977 566666666643 2344444443
No 17
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=58.88 E-value=7.9 Score=30.96 Aligned_cols=40 Identities=15% Similarity=0.235 Sum_probs=36.0
Q ss_pred hhHHHHhhhceeeEE---EeeCchHHHHHHHHHHhccCeeEEe
Q 023334 241 CNMDIISHVQQVICF---AFHDSRLLMETCQEAKNLRKIVTLF 280 (283)
Q Consensus 241 CN~eIIsrcqQlICF---AFHDS~tLLetC~eAe~~~KiVTLf 280 (283)
.+..++.+||.|+.| -+.+|+=.-.--+.||++++-|.+|
T Consensus 75 ~~~~lL~~CdevwV~~L~Gw~~S~Gm~~Ei~~A~~~g~pV~~~ 117 (125)
T 1t1j_A 75 VDAFYMDHLEELIVLDLPGWRDSAGIRREMEFFEAGGQRVSLW 117 (125)
T ss_dssp HHHHHHHHCSEEEECCCTTGGGCHHHHHHHHHHHHTTCEEEEH
T ss_pred HHHHHHHhCCeeEEEecCCCCCChhHHHHHHHHHHCCCcEEEE
Confidence 557789999999999 8999999999999999999998764
No 18
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=58.72 E-value=13 Score=32.32 Aligned_cols=48 Identities=17% Similarity=0.179 Sum_probs=33.6
Q ss_pred CCceEEEecccccchhHHHHHHHHHHHHHhhCCeeee---cCCCCchHHHHHhhhhh
Q 023334 139 GPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYT---SGASGTNAAVIRGALRA 192 (283)
Q Consensus 139 G~rrIa~lGsRhvp~~hq~LIEllsyALvl~gNhi~T---SGA~GTNAAvIRGaLrA 192 (283)
.++.|-|+|||.-. |.+|+-.+ ..+|.+-++ -|++=||-..|+..++.
T Consensus 63 ~~~~iLfVgTk~~~---~~~V~~~A---~~~g~~yv~~rWlgG~LTN~~ti~~~i~~ 113 (231)
T 3bbn_B 63 RGKQFLIVGTKNKA---ADSVARAA---IRARCHYVNKKWLGGMLTNWSTTETRLHK 113 (231)
T ss_dssp TTCCEEEECCCTTT---HHHHHHHH---HHHTCEECCSSCCSCSSSCHHHHHHHHHH
T ss_pred CCCEEEEEeCcHHH---HHHHHHHH---HHhCCccccccccCCCCcCHHHHHHHHHH
Confidence 56789999999853 66654433 344655554 38999999999876554
No 19
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=58.37 E-value=90 Score=26.90 Aligned_cols=53 Identities=21% Similarity=0.266 Sum_probs=38.8
Q ss_pred HHhhhhhcCCCceeEeecccccCCChhHHHHHHHHhhH-hcCCCCCCCChHHHHhhhh
Q 023334 186 IRGALRAERPDLLTVILPQSLKKQPPESQELLAKVKTV-IEKPHNDHLPLIEASRLCN 242 (283)
Q Consensus 186 IRGaLrAe~P~lLTViLPQSL~kQp~ESqelLe~V~hl-VE~PeND~LpL~eAS~lCN 242 (283)
.+-.|..+++|.+.|..|-.+-. +-..+.|+.=+|| +|||=- +.+.||-+|..
T Consensus 88 ~~~ll~~~~vD~V~I~tp~~~H~--~~~~~al~aGkhVl~EKP~a--~~~~ea~~l~~ 141 (412)
T 4gqa_A 88 WRELVNDPQVDVVDITSPNHLHY--TMAMAAIAAGKHVYCEKPLA--VNEQQAQEMAQ 141 (412)
T ss_dssp HHHHHHCTTCCEEEECSCGGGHH--HHHHHHHHTTCEEEEESCSC--SSHHHHHHHHH
T ss_pred HHHHhcCCCCCEEEECCCcHHHH--HHHHHHHHcCCCeEeecCCc--CCHHHHHHHHH
Confidence 45566677899999999977653 4456667766775 899964 57889888764
No 20
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=55.74 E-value=89 Score=26.02 Aligned_cols=82 Identities=10% Similarity=-0.023 Sum_probs=55.6
Q ss_pred hHHHHHHHHHhcCCceEEEecccccchhH-HHHHHHHHHHHHhhCCeeeecCCCCchHHHHHhhhhhcCCCceeEeeccc
Q 023334 127 DYLQELLAIQQQGPRAIGFFGTRNMGFMH-QELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQS 205 (283)
Q Consensus 127 D~lqELaaIQq~G~rrIa~lGsRhvp~~h-q~LIEllsyALvl~gNhi~TSGA~GTNAAvIRGaLrAe~P~lLTViLPQS 205 (283)
++++++..+.+.|.+.|.|.|.. -|.++ ..+.|++.+.-.. |-+|-||++. .+-..++-...+ ..+.+. =+
T Consensus 88 ei~~~i~~~~~~g~~~i~~~gGe-~p~~~~~~~~~li~~i~~~-~~~i~~s~g~-l~~e~l~~L~~a-g~~~v~----i~ 159 (348)
T 3iix_A 88 EIVERARLAVQFGAKTIVLQSGE-DPYXMPDVISDIVKEIKKM-GVAVTLSLGE-WPREYYEKWKEA-GADRYL----LR 159 (348)
T ss_dssp HHHHHHHHHHHTTCSEEEEEESC-CGGGTTHHHHHHHHHHHTT-SCEEEEECCC-CCHHHHHHHHHH-TCCEEE----CC
T ss_pred HHHHHHHHHHHCCCCEEEEEeCC-CCCccHHHHHHHHHHHHhc-CceEEEecCC-CCHHHHHHHHHh-CCCEEe----ee
Confidence 38888888999999999998877 46777 8899999887766 7777766543 455566555554 444433 25
Q ss_pred ccCCChhHHHH
Q 023334 206 LKKQPPESQEL 216 (283)
Q Consensus 206 L~kQp~ESqel 216 (283)
++--.+|.++.
T Consensus 160 let~~~~~~~~ 170 (348)
T 3iix_A 160 HETANPVLHRK 170 (348)
T ss_dssp CBCSCHHHHHH
T ss_pred eeeCCHHHHHH
Confidence 55444444443
No 21
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=54.73 E-value=6.8 Score=32.16 Aligned_cols=40 Identities=15% Similarity=0.051 Sum_probs=22.5
Q ss_pred chhHHHHHHHHHHHHHh---h-CCeeeecCCCCchHHHHHhhhh
Q 023334 152 GFMHQELIEILSYALVI---T-KNHIYTSGASGTNAAVIRGALR 191 (283)
Q Consensus 152 p~~hq~LIEllsyALvl---~-gNhi~TSGA~GTNAAvIRGaLr 191 (283)
+-+++.+.|.++...-. . .+-++|+|++..+.+++++.+.
T Consensus 81 ~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~~ 124 (407)
T 3nra_A 81 LGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVA 124 (407)
T ss_dssp HHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhCC
Confidence 33455555555443332 1 4666777777777777766543
No 22
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=49.78 E-value=11 Score=31.12 Aligned_cols=24 Identities=13% Similarity=0.012 Sum_probs=15.8
Q ss_pred hCCeeeecCCCCchHHHHHhhhhh
Q 023334 169 TKNHIYTSGASGTNAAVIRGALRA 192 (283)
Q Consensus 169 ~gNhi~TSGA~GTNAAvIRGaLrA 192 (283)
..+-++|+|++..+..++++.++.
T Consensus 98 ~~~i~~t~G~t~al~~~~~~l~~~ 121 (417)
T 3g7q_A 98 PQNIALTNGSQSAFFYLFNLFAGR 121 (417)
T ss_dssp GGGEEEESCHHHHHHHHHHHHSBC
T ss_pred cccEEEeCCcHHHHHHHHHHHcCC
Confidence 356667777777777777766544
No 23
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=48.18 E-value=73 Score=26.32 Aligned_cols=113 Identities=24% Similarity=0.239 Sum_probs=58.7
Q ss_pred hhHHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHhhC-Ceeee-cCCCCchH-------------HHHHhhh
Q 023334 126 VDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITK-NHIYT-SGASGTNA-------------AVIRGAL 190 (283)
Q Consensus 126 vD~lqELaaIQq~G~rrIa~lGsRhvp~~hq~LIEllsyALvl~g-Nhi~T-SGA~GTNA-------------AvIRGaL 190 (283)
+|+.-|-.-|+.--|=||||+|.-.++-.|-.-+.-+...+.... -.|+- ..-.--.| .=.+-.|
T Consensus 11 ~~~~~~~~~~~~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell 90 (393)
T 4fb5_A 11 VDLGTENLYFQSMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALI 90 (393)
T ss_dssp -------------CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHH
T ss_pred cccCccCccccCCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHh
Confidence 455566666777667799999998888777554332222211111 11110 00000000 0145566
Q ss_pred hhcCCCceeEeecccccCCChhHHHHHHHHhh-HhcCCCCCCCChHHHHhhhh
Q 023334 191 RAERPDLLTVILPQSLKKQPPESQELLAKVKT-VIEKPHNDHLPLIEASRLCN 242 (283)
Q Consensus 191 rAe~P~lLTViLPQSL~kQp~ESqelLe~V~h-lVE~PeND~LpL~eAS~lCN 242 (283)
..+++|.+.|..|-.+-. +-..+.|+.=+| ++|||=- +.+.||.+|..
T Consensus 91 ~~~~iDaV~IatP~~~H~--~~a~~al~aGkhVl~EKPla--~~~~ea~~l~~ 139 (393)
T 4fb5_A 91 ADPEVDVVSVTTPNQFHA--EMAIAALEAGKHVWCEKPMA--PAYADAERMLA 139 (393)
T ss_dssp HCTTCCEEEECSCGGGHH--HHHHHHHHTTCEEEECSCSC--SSHHHHHHHHH
T ss_pred cCCCCcEEEECCChHHHH--HHHHHHHhcCCeEEEccCCc--ccHHHHHHhhh
Confidence 677899999999987643 335666777777 4799964 67888887764
No 24
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=47.83 E-value=9.5 Score=31.43 Aligned_cols=22 Identities=18% Similarity=0.225 Sum_probs=12.7
Q ss_pred hCCeeeecCCCCchHHHHHhhh
Q 023334 169 TKNHIYTSGASGTNAAVIRGAL 190 (283)
Q Consensus 169 ~gNhi~TSGA~GTNAAvIRGaL 190 (283)
..+-++|+|++..+.+++++.+
T Consensus 91 ~~~v~~t~g~~~al~~~~~~l~ 112 (391)
T 3h14_A 91 PGRVVITPGSSGGFLLAFTALF 112 (391)
T ss_dssp GGGEEEESSHHHHHHHHHHHHC
T ss_pred HHHEEEecChHHHHHHHHHHhc
Confidence 3455666666666666666554
No 25
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=46.63 E-value=47 Score=27.87 Aligned_cols=41 Identities=15% Similarity=0.127 Sum_probs=32.9
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHhhC
Q 023334 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITK 170 (283)
Q Consensus 128 ~lqELaaIQq~G~rrIa~lGsRhvp~~hq~LIEllsyALvl~g 170 (283)
+.+.+..+.+.|.+.|.|.|. =|++|..++|++.++-...+
T Consensus 55 i~~~i~~~~~~g~~~i~~tGG--EPll~~~l~~li~~~~~~~~ 95 (340)
T 1tv8_A 55 MARIAKVYAELGVKKIRITGG--EPLMRRDLDVLIAKLNQIDG 95 (340)
T ss_dssp HHHHHHHHHHTTCCEEEEESS--CGGGSTTHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHCCCCEEEEeCC--CccchhhHHHHHHHHHhCCC
Confidence 555566666789999999994 59999999999999876654
No 26
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=45.23 E-value=11 Score=30.37 Aligned_cols=21 Identities=10% Similarity=0.052 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHhhCCeeeec
Q 023334 156 QELIEILSYALVITKNHIYTS 176 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~TS 176 (283)
.+.++++..++...|..|+++
T Consensus 81 t~a~~~~~~~l~~~gd~vl~~ 101 (386)
T 2dr1_A 81 TGIMEASIRNGVSKGGKVLVT 101 (386)
T ss_dssp HHHHHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHHHHhhcCCCeEEEE
Confidence 344555555554455554443
No 27
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=45.07 E-value=16 Score=29.60 Aligned_cols=20 Identities=10% Similarity=0.150 Sum_probs=10.1
Q ss_pred CeeeecCCCCchHHHHHhhh
Q 023334 171 NHIYTSGASGTNAAVIRGAL 190 (283)
Q Consensus 171 Nhi~TSGA~GTNAAvIRGaL 190 (283)
+-++|+|++..+.+++++.+
T Consensus 84 ~v~~~~g~~~a~~~~~~~l~ 103 (383)
T 3kax_A 84 WIVFSAGIVPALSTSIQAFT 103 (383)
T ss_dssp GEEEESCHHHHHHHHHHHHC
T ss_pred hEEEcCCHHHHHHHHHHHhC
Confidence 44555555555555555443
No 28
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=44.03 E-value=16 Score=29.63 Aligned_cols=20 Identities=20% Similarity=0.202 Sum_probs=11.5
Q ss_pred CeeeecCCCCchHHHHHhhh
Q 023334 171 NHIYTSGASGTNAAVIRGAL 190 (283)
Q Consensus 171 Nhi~TSGA~GTNAAvIRGaL 190 (283)
+-++|+|++..+.++++..+
T Consensus 92 ~v~~~~g~~~a~~~~~~~~~ 111 (391)
T 4dq6_A 92 WLIYSPGVIPAISLLINELT 111 (391)
T ss_dssp GEEEESCHHHHHHHHHHHHS
T ss_pred HeEEcCChHHHHHHHHHHhC
Confidence 45556666655555555553
No 29
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=43.78 E-value=18 Score=31.39 Aligned_cols=38 Identities=16% Similarity=0.090 Sum_probs=25.3
Q ss_pred hHHHHHHHHHHHHHhh---CCeeeecCCCCchHHHHHhhhh
Q 023334 154 MHQELIEILSYALVIT---KNHIYTSGASGTNAAVIRGALR 191 (283)
Q Consensus 154 ~hq~LIEllsyALvl~---gNhi~TSGA~GTNAAvIRGaLr 191 (283)
+.+.+.+.++..+-.. ++-++|+|++..|.++++.+.+
T Consensus 108 l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~ 148 (497)
T 3mc6_A 108 MESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKM 148 (497)
T ss_dssp HHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHH
Confidence 3345555555544333 5678899988888888887764
No 30
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=42.56 E-value=22 Score=28.81 Aligned_cols=21 Identities=10% Similarity=0.093 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHhh--CCeeeec
Q 023334 156 QELIEILSYALVIT--KNHIYTS 176 (283)
Q Consensus 156 q~LIEllsyALvl~--gNhi~TS 176 (283)
++.++++..++... |.+|++.
T Consensus 92 ~~al~~~~~~~~~~~~gd~vl~~ 114 (376)
T 3ezs_A 92 REVLFNFPSFVLFDYQNPTIAYP 114 (376)
T ss_dssp HHHHHHHHHHHTTTCSSCEEEEE
T ss_pred HHHHHHHHHHHcCCCCCCEEEEe
Confidence 45666666666655 5565554
No 31
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=42.45 E-value=23 Score=28.66 Aligned_cols=22 Identities=18% Similarity=0.253 Sum_probs=13.8
Q ss_pred CCeeeecCCCCchHHHHHhhhh
Q 023334 170 KNHIYTSGASGTNAAVIRGALR 191 (283)
Q Consensus 170 gNhi~TSGA~GTNAAvIRGaLr 191 (283)
.+-++|||++..+.+++++.++
T Consensus 86 ~~i~~~~g~~~a~~~~~~~l~~ 107 (391)
T 3dzz_A 86 DWCVFASGVVPAISAMVRQFTS 107 (391)
T ss_dssp GGEEEESCHHHHHHHHHHHHSC
T ss_pred HHEEECCCHHHHHHHHHHHhCC
Confidence 3556667766666666666543
No 32
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=42.37 E-value=18 Score=29.18 Aligned_cols=20 Identities=0% Similarity=-0.076 Sum_probs=12.3
Q ss_pred CeeeecCCCCchHHHHHhhh
Q 023334 171 NHIYTSGASGTNAAVIRGAL 190 (283)
Q Consensus 171 Nhi~TSGA~GTNAAvIRGaL 190 (283)
+-++|+|++..+.+++++..
T Consensus 61 ~v~~~~g~t~al~~~~~~~~ 80 (385)
T 2bkw_A 61 PFVLAGSGTLGWDIFASNFI 80 (385)
T ss_dssp EEEEESCTTHHHHHHHHHHS
T ss_pred eEEEcCchHHHHHHHHHHHh
Confidence 44566666666666666654
No 33
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=41.68 E-value=16 Score=29.10 Aligned_cols=21 Identities=19% Similarity=0.158 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHH----hhCCeeeec
Q 023334 156 QELIEILSYALV----ITKNHIYTS 176 (283)
Q Consensus 156 q~LIEllsyALv----l~gNhi~TS 176 (283)
++.++++..++. ..|.+|+++
T Consensus 70 ~~a~~~~~~~~~~~~~~~gd~vi~~ 94 (382)
T 4hvk_A 70 TEANNLAIIGYAMRNARKGKHILVS 94 (382)
T ss_dssp HHHHHHHHHHHHHHHGGGCCEEEEE
T ss_pred hHHHHHHHHHhhhhhcCCCCEEEEC
Confidence 344555555555 445555443
No 34
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=41.55 E-value=15 Score=29.97 Aligned_cols=20 Identities=35% Similarity=0.527 Sum_probs=10.2
Q ss_pred CeeeecCCCCchHHHHHhhh
Q 023334 171 NHIYTSGASGTNAAVIRGAL 190 (283)
Q Consensus 171 Nhi~TSGA~GTNAAvIRGaL 190 (283)
+-++|+|++..+.+++++.+
T Consensus 82 ~v~~~~g~t~al~~~~~~l~ 101 (400)
T 3vax_A 82 ELIFTSGATESNNIALLGLA 101 (400)
T ss_dssp GEEEESCHHHHHHHHHHTTH
T ss_pred cEEEeCCHHHHHHHHHHHHH
Confidence 34555555555555555544
No 35
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=41.29 E-value=1.9e+02 Score=25.62 Aligned_cols=142 Identities=16% Similarity=0.199 Sum_probs=80.2
Q ss_pred hcccceeeecccccCCChh--HHHHHHH-HHhcCCceEEEeccc--ccchhHHHHHHHHHHHHHhhCCe---eeecCCCC
Q 023334 109 VEGSGAVMVSEFKPVPDVD--YLQELLA-IQQQGPRAIGFFGTR--NMGFMHQELIEILSYALVITKNH---IYTSGASG 180 (283)
Q Consensus 109 v~g~~~v~~~~~~~~p~vD--~lqELaa-IQq~G~rrIa~lGsR--hvp~~hq~LIEllsyALvl~gNh---i~TSGA~G 180 (283)
.+|.-...+.++..--++| -++++.. +-+.|-.-|.++||- -.-..+.+-.+++..+.-..+.+ |+-.|+..
T Consensus 32 ~~Gv~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~s 111 (343)
T 2v9d_A 32 FTGIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTN 111 (343)
T ss_dssp SCEECCEECCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSC
T ss_pred cCCeEEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCC
Confidence 5677777777776433455 4555555 446899999999984 45566666666666666544443 34455555
Q ss_pred chHHH--HHhhhhhcCCCceeEeecccccCCChhHHHHHHHHhhHhcCCC---------CCCCChHHHHhhhhHHHHhhh
Q 023334 181 TNAAV--IRGALRAERPDLLTVILPQSLKKQPPESQELLAKVKTVIEKPH---------NDHLPLIEASRLCNMDIISHV 249 (283)
Q Consensus 181 TNAAv--IRGaLrAe~P~lLTViLPQSL~kQp~ESqelLe~V~hlVE~Pe---------ND~LpL~eAS~lCN~eIIsrc 249 (283)
|..++ .|-|-++ ..+-+-|+-|--.+--..+..+-.+.|..-+..|- .-.|+.+...+|++ ++
T Consensus 112 t~eai~la~~A~~~-Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~-----~~ 185 (343)
T 2v9d_A 112 ARETIELSQHAQQA-GADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLAD-----SR 185 (343)
T ss_dssp HHHHHHHHHHHHHH-TCSEEEEECCSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHH-----HC
T ss_pred HHHHHHHHHHHHhc-CCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHHH-----hC
Confidence 55544 3444444 67777777665433222333333444444333331 23456555555542 34
Q ss_pred ceeeEEE
Q 023334 250 QQVICFA 256 (283)
Q Consensus 250 qQlICFA 256 (283)
..++..=
T Consensus 186 pnIvgiK 192 (343)
T 2v9d_A 186 SNIIGIK 192 (343)
T ss_dssp TTEEEEE
T ss_pred CCEEEEE
Confidence 6666543
No 36
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=41.18 E-value=16 Score=29.10 Aligned_cols=13 Identities=15% Similarity=-0.023 Sum_probs=7.2
Q ss_pred CCChHHHHhhhhH
Q 023334 231 HLPLIEASRLCNM 243 (283)
Q Consensus 231 ~LpL~eAS~lCN~ 243 (283)
-+|+.+-..+|.+
T Consensus 137 ~~~l~~i~~l~~~ 149 (352)
T 1iug_A 137 LADLPALARAFKE 149 (352)
T ss_dssp ECCHHHHHHHHHH
T ss_pred ecCHHHHHHHHHh
Confidence 3555555555554
No 37
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=41.16 E-value=21 Score=28.78 Aligned_cols=21 Identities=19% Similarity=0.232 Sum_probs=12.6
Q ss_pred HhcCCCC---CCCChHHHHhhhhH
Q 023334 223 VIEKPHN---DHLPLIEASRLCNM 243 (283)
Q Consensus 223 lVE~PeN---D~LpL~eAS~lCN~ 243 (283)
+++.|.| .-+|+.+-..+|.+
T Consensus 143 ~~~~~~nptG~~~~l~~i~~l~~~ 166 (382)
T 4eb5_A 143 SVQHANNEIGTIQPVEEISEVLAG 166 (382)
T ss_dssp ECCSBCTTTCBBCCHHHHHHHHTT
T ss_pred EEeccCCCccccCCHHHHHHHHHH
Confidence 4455554 44677776677754
No 38
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=40.96 E-value=32 Score=27.65 Aligned_cols=12 Identities=33% Similarity=0.526 Sum_probs=5.8
Q ss_pred CChHHHHhhhhH
Q 023334 232 LPLIEASRLCNM 243 (283)
Q Consensus 232 LpL~eAS~lCN~ 243 (283)
+|+.+-..+|.+
T Consensus 165 ~~l~~i~~l~~~ 176 (393)
T 3kgw_A 165 QPLDGFGELCHR 176 (393)
T ss_dssp CCCTTHHHHHHH
T ss_pred ccHHHHHHHHHH
Confidence 444454555543
No 39
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=40.36 E-value=17 Score=29.55 Aligned_cols=19 Identities=11% Similarity=0.123 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHhhCCeeee
Q 023334 157 ELIEILSYALVITKNHIYT 175 (283)
Q Consensus 157 ~LIEllsyALvl~gNhi~T 175 (283)
+.++++..++...|.+|++
T Consensus 70 ~a~~~~~~~~~~~gd~Vl~ 88 (392)
T 2z9v_A 70 LGLEAAAASLISPDDVVLN 88 (392)
T ss_dssp HHHHHHHHHHCCTTCCEEE
T ss_pred HHHHHHHHHhcCCCCEEEE
Confidence 3444444444444444443
No 40
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=39.77 E-value=17 Score=28.93 Aligned_cols=20 Identities=5% Similarity=-0.097 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHhhCCeeeec
Q 023334 157 ELIEILSYALVITKNHIYTS 176 (283)
Q Consensus 157 ~LIEllsyALvl~gNhi~TS 176 (283)
+.++++-.++...|.+|+++
T Consensus 77 ~a~~~~~~~~~~~gd~vl~~ 96 (359)
T 1svv_A 77 QTNLIACSLALRPWEAVIAT 96 (359)
T ss_dssp HHHHHHHHHHCCTTEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEc
Confidence 44455555554444444443
No 41
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=39.12 E-value=18 Score=29.65 Aligned_cols=19 Identities=16% Similarity=0.143 Sum_probs=9.7
Q ss_pred eeeecCCCCchHHHHHhhh
Q 023334 172 HIYTSGASGTNAAVIRGAL 190 (283)
Q Consensus 172 hi~TSGA~GTNAAvIRGaL 190 (283)
-++|+|++..+.++++.++
T Consensus 88 v~~t~g~t~al~~~~~~~~ 106 (393)
T 1vjo_A 88 IAVSGTGTAAMEATIANAV 106 (393)
T ss_dssp EEESSCHHHHHHHHHHHHC
T ss_pred EEEeCchHHHHHHHHHhcc
Confidence 4455555555555555543
No 42
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=38.18 E-value=27 Score=28.05 Aligned_cols=20 Identities=15% Similarity=0.199 Sum_probs=12.0
Q ss_pred CeeeecCCCCchHHHHHhhh
Q 023334 171 NHIYTSGASGTNAAVIRGAL 190 (283)
Q Consensus 171 Nhi~TSGA~GTNAAvIRGaL 190 (283)
+-++|+|++..+.++++.+.
T Consensus 63 ~v~~~~g~t~a~~~~~~~~~ 82 (384)
T 1eg5_A 63 EIFFTSCATESINWILKTVA 82 (384)
T ss_dssp GEEEESCHHHHHHHHHHHHH
T ss_pred eEEEECCHHHHHHHHHHhhh
Confidence 45566666666666666555
No 43
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=37.63 E-value=19 Score=29.33 Aligned_cols=19 Identities=16% Similarity=0.029 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHhhCCeeee
Q 023334 157 ELIEILSYALVITKNHIYT 175 (283)
Q Consensus 157 ~LIEllsyALvl~gNhi~T 175 (283)
+.++++..++...|..|++
T Consensus 81 ~a~~~~~~~~~~~gd~vl~ 99 (393)
T 2huf_A 81 GGMEATLCNLLEDGDVILI 99 (393)
T ss_dssp HHHHHHHHHHCCTTCEEEE
T ss_pred HHHHHHHHHHhCCCCEEEE
Confidence 3344444444444444443
No 44
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=37.60 E-value=13 Score=33.18 Aligned_cols=18 Identities=50% Similarity=0.829 Sum_probs=13.3
Q ss_pred eeecCC--CCchHHHHHhhhh
Q 023334 173 IYTSGA--SGTNAAVIRGALR 191 (283)
Q Consensus 173 i~TSGA--~GTNAAvIRGaLr 191 (283)
|+|||+ .|.||+ |||+.|
T Consensus 6 IltsGG~~pG~Na~-ir~vv~ 25 (319)
T 4a3s_A 6 VLTSGGDSPGMNAA-VRAVVR 25 (319)
T ss_dssp EEEESSCCTTHHHH-HHHHHH
T ss_pred EECcCCCcHHHHHH-HHHHHH
Confidence 789997 788874 566554
No 45
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=37.58 E-value=19 Score=29.59 Aligned_cols=19 Identities=21% Similarity=0.092 Sum_probs=10.3
Q ss_pred CeeeecCCCCchHHHHHhh
Q 023334 171 NHIYTSGASGTNAAVIRGA 189 (283)
Q Consensus 171 Nhi~TSGA~GTNAAvIRGa 189 (283)
+-++|+|++..+.+++++.
T Consensus 91 ~v~~t~g~~~a~~~~~~~l 109 (399)
T 1c7n_A 91 WIINTAGVVPAVFNAVREF 109 (399)
T ss_dssp GEEEESSHHHHHHHHHHHH
T ss_pred hEEEcCCHHHHHHHHHHHh
Confidence 4455555555555555544
No 46
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=36.93 E-value=53 Score=30.41 Aligned_cols=53 Identities=26% Similarity=0.328 Sum_probs=0.0
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCcCCCCCCCccccccCCCCccccccccccccccccccccc
Q 023334 8 RLLLPLSSVSTTNATTPFFNSIDFPSKFLKSPNPNFNFFASSSHPTQHSWRARRTKKTWLCGNMRK 73 (283)
Q Consensus 8 ~lllpl~~~~~~~~~~p~~~~~~~~~~~~~s~npn~~~~~s~s~~~q~~~~~~~~r~~~~~~~~~~ 73 (283)
-||-||++++.+++..|++.+-.|...++.+ . +-|.....+++.+|-.|.+..
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-~~~~~~~~~~~~~~~~~~~~~ 94 (430)
T 4aec_A 42 LLLNPLTSSSSSSTLRRFRCSPEISSLSFSS------------A-SDFSLAMKRQSRSFADGSERD 94 (430)
T ss_dssp ------------------------------------------------------------------
T ss_pred hhcCCCCCchhhhhccccccchhhccCcccc------------c-cchhhcccCccceeecCCCCC
Confidence 3777888876666666653333333222211 1 235555566777787776543
No 47
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=36.78 E-value=32 Score=27.54 Aligned_cols=20 Identities=20% Similarity=0.199 Sum_probs=12.8
Q ss_pred eeecCCCCchHHHHHhhhhh
Q 023334 173 IYTSGASGTNAAVIRGALRA 192 (283)
Q Consensus 173 i~TSGA~GTNAAvIRGaLrA 192 (283)
++|+|++..+.++++.+...
T Consensus 90 ~~~~ggt~a~~~~~~~~~~~ 109 (397)
T 3f9t_A 90 HIVSGGTEANLMALRCIKNI 109 (397)
T ss_dssp EEESCHHHHHHHHHHHHHHH
T ss_pred EEecCcHHHHHHHHHHHHHH
Confidence 66666666666666666543
No 48
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=36.39 E-value=13 Score=30.18 Aligned_cols=39 Identities=23% Similarity=0.129 Sum_probs=25.3
Q ss_pred hHHHHHHHHHHHHHhhC--Ce-eeecCCCCchHHHHHhhhhh
Q 023334 154 MHQELIEILSYALVITK--NH-IYTSGASGTNAAVIRGALRA 192 (283)
Q Consensus 154 ~hq~LIEllsyALvl~g--Nh-i~TSGA~GTNAAvIRGaLrA 192 (283)
.++++.|.++.-+-... +- ++|+||+..+.+++++.++.
T Consensus 50 ~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l~~~ 91 (362)
T 2c0r_A 50 VHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLKE 91 (362)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhcCCC
Confidence 34555565555443333 32 46799999999999988753
No 49
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=36.33 E-value=1.3e+02 Score=25.32 Aligned_cols=61 Identities=15% Similarity=0.182 Sum_probs=38.9
Q ss_pred hHHHHHHHHHhcCCceEEEecccccchh------HHHHHHHHHHHHHhhCC-ee--eecCCCCchHHHHHh
Q 023334 127 DYLQELLAIQQQGPRAIGFFGTRNMGFM------HQELIEILSYALVITKN-HI--YTSGASGTNAAVIRG 188 (283)
Q Consensus 127 D~lqELaaIQq~G~rrIa~lGsRhvp~~------hq~LIEllsyALvl~gN-hi--~TSGA~GTNAAvIRG 188 (283)
++++|+..+.+.|.|.|.|.|. |+.+. +..+.|++.+.-...|- .| .|+-....+...|+-
T Consensus 37 ~i~~ei~~l~~~G~~ei~l~g~-~~~~yG~~~~~~~~l~~Ll~~l~~~~gi~~ir~~~~~p~~l~~e~l~~ 106 (304)
T 2qgq_A 37 DITREVEDLLKEGKKEIILVAQ-DTTSYGIDLYRKQALPDLLRRLNSLNGEFWIRVMYLHPDHLTEEIISA 106 (304)
T ss_dssp HHHHHHHHHHHTTCCEEEEECT-TGGGTTHHHHSSCCHHHHHHHHHTSSSSCEEEECCCCGGGCCHHHHHH
T ss_pred HHHHHHHHHHHCCCcEEEEEeE-cccccCCCCCcHHHHHHHHHHHHhcCCCcEEEEeeeecccCCHHHHHH
Confidence 4899999998899999999885 33321 45688888776655443 33 222233345555553
No 50
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=36.18 E-value=92 Score=26.75 Aligned_cols=63 Identities=10% Similarity=-0.018 Sum_probs=41.8
Q ss_pred hHHHHHHHHHhcCCceEEEeccc--ccchhHHHHHHHHHHHHHhhCCee-eecCCCCchHHHHHhhhhh
Q 023334 127 DYLQELLAIQQQGPRAIGFFGTR--NMGFMHQELIEILSYALVITKNHI-YTSGASGTNAAVIRGALRA 192 (283)
Q Consensus 127 D~lqELaaIQq~G~rrIa~lGsR--hvp~~hq~LIEllsyALvl~gNhi-~TSGA~GTNAAvIRGaLrA 192 (283)
++++++..+.+.|.++|.|-|+- +-+.-+..+.|++.++-.. |=.+ +|.|. .+...++-...+
T Consensus 103 ei~~~~~~~~~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~-g~~i~~t~G~--l~~e~l~~L~~a 168 (369)
T 1r30_A 103 QVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAM-GLEACMTLGT--LSESQAQRLANA 168 (369)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHHT-TSEEEEECSS--CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHHc-CCeEEEecCC--CCHHHHHHHHHC
Confidence 37888888888999999998753 6667788999999877653 3223 34443 344455544333
No 51
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=35.42 E-value=42 Score=27.31 Aligned_cols=37 Identities=11% Similarity=0.240 Sum_probs=30.0
Q ss_pred hhHHHHHHHHHhcCCceEEEecccccchhHHHHHHHHH
Q 023334 126 VDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILS 163 (283)
Q Consensus 126 vD~lqELaaIQq~G~rrIa~lGsRhvp~~hq~LIElls 163 (283)
.|+++=|...++.+. +||++|-.|+..--..+-+++.
T Consensus 81 ~Dil~al~~a~~~~~-kIavvg~~~~~~~~~~~~~ll~ 117 (196)
T 2q5c_A 81 FDTMRAVYNAKRFGN-ELALIAYKHSIVDKHEIEAMLG 117 (196)
T ss_dssp HHHHHHHHHHGGGCS-EEEEEEESSCSSCHHHHHHHHT
T ss_pred hHHHHHHHHHHhhCC-cEEEEeCcchhhHHHHHHHHhC
Confidence 589999999999875 8999999999877666655553
No 52
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=34.98 E-value=22 Score=28.75 Aligned_cols=20 Identities=10% Similarity=0.175 Sum_probs=11.9
Q ss_pred CCeeeecCCCCchHHHHHhh
Q 023334 170 KNHIYTSGASGTNAAVIRGA 189 (283)
Q Consensus 170 gNhi~TSGA~GTNAAvIRGa 189 (283)
.+-++|+|++..+.++++++
T Consensus 86 ~~v~~~~g~t~a~~~~~~~~ 105 (406)
T 1kmj_A 86 EELVFVRGTTEGINLVANSW 105 (406)
T ss_dssp GGEEEESSHHHHHHHHHHHT
T ss_pred CeEEEeCChhHHHHHHHHHh
Confidence 34456666666666666655
No 53
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=34.60 E-value=2.4e+02 Score=24.81 Aligned_cols=140 Identities=19% Similarity=0.196 Sum_probs=79.9
Q ss_pred hcccceeeecccccCCChh--HHHHHHH-HHhcCCceEEEeccc--ccchhHHHHHHHHHHHHHhhCCe---eeecCCCC
Q 023334 109 VEGSGAVMVSEFKPVPDVD--YLQELLA-IQQQGPRAIGFFGTR--NMGFMHQELIEILSYALVITKNH---IYTSGASG 180 (283)
Q Consensus 109 v~g~~~v~~~~~~~~p~vD--~lqELaa-IQq~G~rrIa~lGsR--hvp~~hq~LIEllsyALvl~gNh---i~TSGA~G 180 (283)
.+|.-...+.++..--++| -++.|.. +-+.|..-|.++||- -.-+.+.+-.+++..+.-..+.+ |+-.|+..
T Consensus 35 ~~Gv~~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~s 114 (332)
T 2r8w_A 35 FKGLSAFPITPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALR 114 (332)
T ss_dssp GCEEEECCCCCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSS
T ss_pred cCCeeEEeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCC
Confidence 5676666677775433355 4555555 446899999999984 44456666667766666555543 34455555
Q ss_pred chHHH--HHhhhhhcCCCceeEeecccccCCC-hhHHHHHHHHhhHhcCCC---------CCCCChHHHHhhhhHHHHhh
Q 023334 181 TNAAV--IRGALRAERPDLLTVILPQSLKKQP-PESQELLAKVKTVIEKPH---------NDHLPLIEASRLCNMDIISH 248 (283)
Q Consensus 181 TNAAv--IRGaLrAe~P~lLTViLPQSL~kQp-~ESqelLe~V~hlVE~Pe---------ND~LpL~eAS~lCN~eIIsr 248 (283)
|.-|+ .|-|-++ ..+-+-|+-|- ..|-+ .+..+-.+.|..-+..|- .-.|+.....+|+ +
T Consensus 115 t~eai~la~~A~~~-Gadavlv~~P~-Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La------~ 186 (332)
T 2r8w_A 115 TDEAVALAKDAEAA-GADALLLAPVS-YTPLTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLA------Y 186 (332)
T ss_dssp HHHHHHHHHHHHHH-TCSEEEECCCC-SSCCCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHHH------T
T ss_pred HHHHHHHHHHHHhc-CCCEEEECCCC-CCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHH------c
Confidence 55544 4555555 67777666664 44422 233334445554444441 2346665555554 2
Q ss_pred hceeeEEE
Q 023334 249 VQQVICFA 256 (283)
Q Consensus 249 cqQlICFA 256 (283)
+..++..=
T Consensus 187 ~pnIvgiK 194 (332)
T 2r8w_A 187 IPNIRAIK 194 (332)
T ss_dssp STTEEEEE
T ss_pred CCCEEEEE
Confidence 45666543
No 54
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=34.49 E-value=37 Score=30.11 Aligned_cols=37 Identities=22% Similarity=0.215 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHhhC--Ceee-ecCCCCchHHHHHhhhhh
Q 023334 156 QELIEILSYALVITK--NHIY-TSGASGTNAAVIRGALRA 192 (283)
Q Consensus 156 q~LIEllsyALvl~g--Nhi~-TSGA~GTNAAvIRGaLrA 192 (283)
.+.-|.++.-+-... .-++ |||||..+.++|+|.++.
T Consensus 75 ~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~~ 114 (386)
T 3qm2_A 75 EEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGD 114 (386)
T ss_dssp HHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccCC
Confidence 344556666554432 2466 688998888999998865
No 55
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=34.46 E-value=32 Score=29.53 Aligned_cols=38 Identities=8% Similarity=-0.063 Sum_probs=23.6
Q ss_pred hHHHHHHHHHHHHHhhC-C-----eeeecCCCCchHHHHHhhhh
Q 023334 154 MHQELIEILSYALVITK-N-----HIYTSGASGTNAAVIRGALR 191 (283)
Q Consensus 154 ~hq~LIEllsyALvl~g-N-----hi~TSGA~GTNAAvIRGaLr 191 (283)
+.+++.+.++.-+-... + -++|+||+..|..+++++..
T Consensus 82 l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~ 125 (452)
T 2dgk_A 82 IDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKW 125 (452)
T ss_dssp HHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHH
Confidence 34555555555443332 2 47888888888887777653
No 56
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=34.12 E-value=28 Score=28.37 Aligned_cols=21 Identities=10% Similarity=0.143 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHhhCCeeeec
Q 023334 156 QELIEILSYALVITKNHIYTS 176 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~TS 176 (283)
.+.++++..++...|..|++.
T Consensus 79 t~al~~~~~~~~~~gd~vl~~ 99 (396)
T 2ch1_A 79 HAGMEAMLSNLLEEGDRVLIA 99 (396)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCeEEEE
Confidence 566777777776666665554
No 57
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=33.93 E-value=35 Score=27.75 Aligned_cols=21 Identities=19% Similarity=0.137 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHhhCCeeeec
Q 023334 156 QELIEILSYALVITKNHIYTS 176 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~TS 176 (283)
.+.++++..++...|.+|++.
T Consensus 92 ~~al~~~~~~l~~~gd~Vl~~ 112 (360)
T 3hdo_A 92 DEVLNNLIRAFAAEGEEIGYV 112 (360)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEc
Confidence 445555555555555555544
No 58
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=33.93 E-value=17 Score=30.02 Aligned_cols=21 Identities=14% Similarity=0.265 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHhhCCeeeec
Q 023334 156 QELIEILSYALVITKNHIYTS 176 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~TS 176 (283)
.+.++++..++...|.+|++.
T Consensus 108 t~a~~~~~~~~~~~gd~vl~~ 128 (407)
T 2zc0_A 108 TGALDLLGRVLIDPGDVVITE 128 (407)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEe
Confidence 445555555554445554443
No 59
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=33.72 E-value=23 Score=29.15 Aligned_cols=21 Identities=24% Similarity=0.251 Sum_probs=11.9
Q ss_pred CCeeeecCCCCchHHHHHhhh
Q 023334 170 KNHIYTSGASGTNAAVIRGAL 190 (283)
Q Consensus 170 gNhi~TSGA~GTNAAvIRGaL 190 (283)
.+-++|+|++..+.+++++.+
T Consensus 100 ~~i~~~~g~~~al~~~~~~l~ 120 (398)
T 3ele_A 100 DNLYMTMGAAASLSICFRALT 120 (398)
T ss_dssp GGEEEESSHHHHHHHHHHHHC
T ss_pred HHEEEccCHHHHHHHHHHHHc
Confidence 345556666655555555553
No 60
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=33.62 E-value=13 Score=31.72 Aligned_cols=10 Identities=40% Similarity=0.617 Sum_probs=8.6
Q ss_pred eeeecCCCCc
Q 023334 172 HIYTSGASGT 181 (283)
Q Consensus 172 hi~TSGA~GT 181 (283)
-|||||.||.
T Consensus 42 Il~TSGTTG~ 51 (358)
T 4gs5_A 42 VLHTSGSTGM 51 (358)
T ss_dssp EEEEECTTSS
T ss_pred EEECCccccc
Confidence 4799999995
No 61
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=33.60 E-value=19 Score=29.84 Aligned_cols=10 Identities=20% Similarity=0.501 Sum_probs=4.9
Q ss_pred hHHHHhhhhH
Q 023334 234 LIEASRLCNM 243 (283)
Q Consensus 234 L~eAS~lCN~ 243 (283)
+.+-..+|.+
T Consensus 222 l~~l~~l~~~ 231 (426)
T 1sff_A 222 MQRLRALCDE 231 (426)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444555543
No 62
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=33.27 E-value=18 Score=29.58 Aligned_cols=21 Identities=14% Similarity=0.167 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHhhCCeeeec
Q 023334 156 QELIEILSYALVITKNHIYTS 176 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~TS 176 (283)
.+.++++..++...|.+|+++
T Consensus 100 ~~a~~~~~~~~~~~gd~vl~~ 120 (388)
T 1j32_A 100 KQSIFNLMLAMIEPGDEVIIP 120 (388)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEc
Confidence 455666666665556555554
No 63
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=33.12 E-value=28 Score=27.99 Aligned_cols=35 Identities=14% Similarity=0.052 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHHHHhhCCeeeecCCCCchHHHHHhh
Q 023334 154 MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGA 189 (283)
Q Consensus 154 ~hq~LIEllsyALvl~gNhi~TSGA~GTNAAvIRGa 189 (283)
....+-|.++.-+-.. +-++|+|++..+.++++++
T Consensus 33 ~~~~l~~~la~~~~~~-~v~~~~ggt~al~~~~~~~ 67 (375)
T 2fnu_A 33 RSLLFEEALCEFLGVK-HALVFNSATSALLTLYRNF 67 (375)
T ss_dssp HHHHHHHHHHHHHTCS-EEEEESCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCC-eEEEeCCHHHHHHHHHHHh
Confidence 3455555555544322 5677777777777777766
No 64
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=33.01 E-value=19 Score=29.01 Aligned_cols=21 Identities=10% Similarity=-0.001 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHhhCCeeeec
Q 023334 156 QELIEILSYALVITKNHIYTS 176 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~TS 176 (283)
.+.++++..++...|.+|+++
T Consensus 79 t~a~~~~~~~~~~~gd~vl~~ 99 (371)
T 2e7j_A 79 REAKFAVMHSLAKKDAWVVMD 99 (371)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEc
Confidence 455666666665566666554
No 65
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=32.00 E-value=26 Score=28.34 Aligned_cols=43 Identities=23% Similarity=0.242 Sum_probs=21.2
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHhhCCeeeec
Q 023334 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTS 176 (283)
Q Consensus 128 ~lqELaaIQq~G~rrIa~lGsRhvp~~hq~LIEllsyALvl~gNhi~TS 176 (283)
+-++++..-...+..|.+..+ -.+.++++..++...|.+|+++
T Consensus 72 lr~~la~~~~~~~~~v~~~~g------~t~a~~~~~~~~~~~gd~vl~~ 114 (363)
T 3ffh_A 72 LRKEVADFYQLEEEELIFTAG------VDELIELLTRVLLDTTTNTVMA 114 (363)
T ss_dssp HHHHHHHHHTCCGGGEEEESS------HHHHHHHHHHHHCSTTCEEEEE
T ss_pred HHHHHHHHhCCChhhEEEeCC------HHHHHHHHHHHHccCCCEEEEc
Confidence 445555554433444444332 2445555555555555555554
No 66
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=31.90 E-value=37 Score=26.76 Aligned_cols=33 Identities=15% Similarity=0.076 Sum_probs=24.0
Q ss_pred cchhHHHHHHHHHHHHHh-hCCeeeecCCCCchH
Q 023334 151 MGFMHQELIEILSYALVI-TKNHIYTSGASGTNA 183 (283)
Q Consensus 151 vp~~hq~LIEllsyALvl-~gNhi~TSGA~GTNA 183 (283)
+|=-...|.|.+..|+.. .-.-|+|||++|...
T Consensus 43 v~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~ 76 (164)
T 2is8_A 43 VPDEPPMIKKVLRLWADREGLDLILTNGGTGLAP 76 (164)
T ss_dssp ECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSST
T ss_pred cCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCCC
Confidence 333456778888887764 467899999999763
No 67
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=31.82 E-value=36 Score=28.11 Aligned_cols=21 Identities=14% Similarity=0.216 Sum_probs=13.0
Q ss_pred HhcCCCC---CCCChHHHHhhhhH
Q 023334 223 VIEKPHN---DHLPLIEASRLCNM 243 (283)
Q Consensus 223 lVE~PeN---D~LpL~eAS~lCN~ 243 (283)
+++.|.| .-+|+.+-..+|.+
T Consensus 168 ~~~~~~nptG~~~~l~~i~~l~~~ 191 (423)
T 3lvm_A 168 SIMHVNNEIGVVQDIAAIGEMCRA 191 (423)
T ss_dssp ECCSBCTTTCBBCCHHHHHHHHHH
T ss_pred EEeCCCCCCccccCHHHHHHHHHH
Confidence 3555443 45677777777765
No 68
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=31.52 E-value=22 Score=28.88 Aligned_cols=19 Identities=21% Similarity=0.350 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHhhCCeeee
Q 023334 157 ELIEILSYALVITKNHIYT 175 (283)
Q Consensus 157 ~LIEllsyALvl~gNhi~T 175 (283)
+.++++..++...|.+|++
T Consensus 96 ~a~~~~~~~~~~~gd~Vl~ 114 (367)
T 3euc_A 96 EIISMLALAAARPGAKVMA 114 (367)
T ss_dssp HHHHHHHHHTCCTTCEEEE
T ss_pred HHHHHHHHHHcCCCCEEEE
Confidence 3444444444444444443
No 69
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=31.14 E-value=29 Score=28.40 Aligned_cols=20 Identities=10% Similarity=0.019 Sum_probs=11.6
Q ss_pred hcCCCCCCCChHHHHhhhhH
Q 023334 224 IEKPHNDHLPLIEASRLCNM 243 (283)
Q Consensus 224 VE~PeND~LpL~eAS~lCN~ 243 (283)
+.+|...-.++.+-..+|.+
T Consensus 130 ~~n~~G~~~~l~~i~~l~~~ 149 (373)
T 3frk_A 130 AVHLYGQPADMDEIKRIAKK 149 (373)
T ss_dssp EECCTTCCCCHHHHHHHHHH
T ss_pred EECCCcCcccHHHHHHHHHH
Confidence 44555555666666666654
No 70
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=31.14 E-value=37 Score=27.11 Aligned_cols=51 Identities=14% Similarity=0.197 Sum_probs=31.3
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHh-hCCeeeecCCCCchH
Q 023334 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVI-TKNHIYTSGASGTNA 183 (283)
Q Consensus 128 ~lqELaaIQq~G~rrIa~lGsRhvp~~hq~LIEllsyALvl-~gNhi~TSGA~GTNA 183 (283)
++.++ +++.|-..+. ...+|=-...|.|.+..|+.. .-.-|+|||++|...
T Consensus 32 ~l~~~--L~~~G~~v~~---~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~~ 83 (172)
T 1mkz_A 32 YLRDS--AQEAGHHVVD---KAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTE 83 (172)
T ss_dssp HHHHH--HHHTTCEEEE---EEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSST
T ss_pred HHHHH--HHHCCCeEeE---EEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCCC
Confidence 45444 3455654221 123333446777888887765 468999999999753
No 71
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=30.93 E-value=25 Score=29.91 Aligned_cols=21 Identities=14% Similarity=0.178 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHhhCCeeeec
Q 023334 156 QELIEILSYALVITKNHIYTS 176 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~TS 176 (283)
.+.++++..++...|..|+++
T Consensus 128 t~al~~~~~~l~~~gd~vl~~ 148 (427)
T 3dyd_A 128 SQAIDLCLAVLANPGQNILVP 148 (427)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEc
Confidence 344445544444444444443
No 72
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=30.93 E-value=40 Score=26.60 Aligned_cols=32 Identities=25% Similarity=0.262 Sum_probs=23.1
Q ss_pred chhHHHHHHHHHHHHHhhCCeeeecCCCCchH
Q 023334 152 GFMHQELIEILSYALVITKNHIYTSGASGTNA 183 (283)
Q Consensus 152 p~~hq~LIEllsyALvl~gNhi~TSGA~GTNA 183 (283)
|==...|.|.+..|+...-.-|+|||++|...
T Consensus 52 ~Dd~~~I~~~l~~a~~~~~DlVittGG~g~~~ 83 (167)
T 2g2c_A 52 PEGYDTVVEAIATALKQGARFIITAGGTGIRA 83 (167)
T ss_dssp CSSHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 33346677777777654468999999999753
No 73
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=30.92 E-value=43 Score=28.04 Aligned_cols=21 Identities=19% Similarity=0.309 Sum_probs=14.1
Q ss_pred HhcCCCCC---CCChHHHHhhhhH
Q 023334 223 VIEKPHND---HLPLIEASRLCNM 243 (283)
Q Consensus 223 lVE~PeND---~LpL~eAS~lCN~ 243 (283)
++|.|.|- -.|+.+-..+|.+
T Consensus 154 ~~~~~~nptG~~~~l~~i~~l~~~ 177 (398)
T 2rfv_A 154 YIETPANPTLSLVDIETVAGIAHQ 177 (398)
T ss_dssp EEESSBTTTTBCCCHHHHHHHHHH
T ss_pred EEECCCCCCCcccCHHHHHHHHHH
Confidence 45666663 4677777777765
No 74
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=30.47 E-value=89 Score=23.84 Aligned_cols=47 Identities=11% Similarity=0.139 Sum_probs=32.8
Q ss_pred HHHHHHHHHhc---CCceEEEecccccchhHHH-HHHHHHHHHHhhCC--eeeecC
Q 023334 128 YLQELLAIQQQ---GPRAIGFFGTRNMGFMHQE-LIEILSYALVITKN--HIYTSG 177 (283)
Q Consensus 128 ~lqELaaIQq~---G~rrIa~lGsRhvp~~hq~-LIEllsyALvl~gN--hi~TSG 177 (283)
+++++..+... +.+.|.|.| -=|++|-. |.|++.++-.. |- .|.|.|
T Consensus 55 i~~~i~~~~~~~~~~~~~i~~~G--GEP~l~~~~l~~l~~~~~~~-~~~i~i~Tng 107 (245)
T 3c8f_A 55 LMKEVVTYRHFMNASGGGVTASG--GEAILQAEFVRDWFRACKKE-GIHTCLDTNG 107 (245)
T ss_dssp HHHHHGGGHHHHTSTTCEEEEEE--SCGGGGHHHHHHHHHHHHTT-TCCEEEEECC
T ss_pred HHHHHHHhhhhhcCCCCeEEEEC--CCcCCCHHHHHHHHHHHHHc-CCcEEEEeCC
Confidence 66666555443 468899999 45999988 68999988654 33 456666
No 75
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=30.34 E-value=13 Score=33.07 Aligned_cols=20 Identities=25% Similarity=0.139 Sum_probs=16.2
Q ss_pred eeeecCCCCchHHHHHhhhhh
Q 023334 172 HIYTSGASGTNAAVIRGALRA 192 (283)
Q Consensus 172 hi~TSGA~GTNAAvIRGaLrA 192 (283)
-++|||+ +.|.+++++.++.
T Consensus 114 V~~~sGs-~an~~~~~all~p 133 (483)
T 1rv3_A 114 VQPYSGS-PANFAVYTALVEP 133 (483)
T ss_dssp CCCSSHH-HHHHHHHHHHTCT
T ss_pred EEECCcH-HHHHHHHHHhcCC
Confidence 6788888 8899989888654
No 76
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=30.18 E-value=27 Score=28.02 Aligned_cols=18 Identities=17% Similarity=0.268 Sum_probs=9.7
Q ss_pred eeeecCCCCchHHHHHhhh
Q 023334 172 HIYTSGASGTNAAVIRGAL 190 (283)
Q Consensus 172 hi~TSGA~GTNAAvIRGaL 190 (283)
-++|+|++..+. ++++.+
T Consensus 57 v~~~~g~t~al~-~~~~~~ 74 (384)
T 3zrp_A 57 LIIPGGGTSAME-SVTSLL 74 (384)
T ss_dssp EEEESCHHHHHH-HGGGGC
T ss_pred EEEcCCcHHHHH-HHHhhc
Confidence 455666555555 555543
No 77
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=29.90 E-value=30 Score=30.42 Aligned_cols=39 Identities=13% Similarity=0.054 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHHHHhh---CCe--eeecCCCCchHHHHHhhhhh
Q 023334 154 MHQELIEILSYALVIT---KNH--IYTSGASGTNAAVIRGALRA 192 (283)
Q Consensus 154 ~hq~LIEllsyALvl~---gNh--i~TSGA~GTNAAvIRGaLrA 192 (283)
+.+.+.+.++.-+-.. .+- ++|+|++..|.++++.+.+.
T Consensus 140 le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~ 183 (514)
T 3mad_A 140 FEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDW 183 (514)
T ss_dssp HHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHH
Confidence 4455666666655444 466 99999999999999888654
No 78
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=29.88 E-value=23 Score=33.11 Aligned_cols=18 Identities=28% Similarity=0.361 Sum_probs=12.6
Q ss_pred eeecCC--CCchHHHHHhhhh
Q 023334 173 IYTSGA--SGTNAAVIRGALR 191 (283)
Q Consensus 173 i~TSGA--~GTNAAvIRGaLr 191 (283)
|+|||+ .|.||| |||+.|
T Consensus 8 VltsGGdapGmNa~-Ir~vv~ 27 (419)
T 3hno_A 8 YAQSGGVTAVINAS-AAGVIE 27 (419)
T ss_dssp EEECSSCCSSHHHH-HHHHHH
T ss_pred EEccCCChHHHHHH-HHHHHH
Confidence 689996 899974 455443
No 79
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=29.82 E-value=1e+02 Score=24.35 Aligned_cols=61 Identities=20% Similarity=0.307 Sum_probs=37.1
Q ss_pred CceEEEecccccchhHHHHHHHHHHHHHhhCCeeeecCCCCchHHHHHhhhhhcCCCceeEeecccccCCChhHHHHHHH
Q 023334 140 PRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQELLAK 219 (283)
Q Consensus 140 ~rrIa~lGsRhvp~~hq~LIEllsyALvl~gNhi~TSGA~GTNAAvIRGaLrAe~P~lLTViLPQSL~kQp~ESqelLe~ 219 (283)
.++|+|+|.-+|+- .+++.|+..|+.++-..-.-. .+++.|++-+-+| +...++.+++
T Consensus 19 ~~~I~iiG~G~mG~-------~la~~l~~~g~~V~~~~~~~~---------~~~~aD~vi~av~------~~~~~~v~~~ 76 (209)
T 2raf_A 19 GMEITIFGKGNMGQ-------AIGHNFEIAGHEVTYYGSKDQ---------ATTLGEIVIMAVP------YPALAALAKQ 76 (209)
T ss_dssp -CEEEEECCSHHHH-------HHHHHHHHTTCEEEEECTTCC---------CSSCCSEEEECSC------HHHHHHHHHH
T ss_pred CCEEEEECCCHHHH-------HHHHHHHHCCCEEEEEcCCHH---------HhccCCEEEEcCC------cHHHHHHHHH
Confidence 46899999988873 356777778888764432211 2346677666666 2334555555
Q ss_pred Hhh
Q 023334 220 VKT 222 (283)
Q Consensus 220 V~h 222 (283)
+..
T Consensus 77 l~~ 79 (209)
T 2raf_A 77 YAT 79 (209)
T ss_dssp THH
T ss_pred HHH
Confidence 543
No 80
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=29.57 E-value=31 Score=28.70 Aligned_cols=22 Identities=5% Similarity=0.051 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHhhCCeeeecC
Q 023334 156 QELIEILSYALVITKNHIYTSG 177 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~TSG 177 (283)
++.++++..++...|.+|++.-
T Consensus 111 ~~al~~~~~~~~~~gd~Vl~~~ 132 (413)
T 3t18_A 111 TGAIRSAIFSYLDEGDPLICHD 132 (413)
T ss_dssp HHHHHHHHHHHCCSSCEEEEES
T ss_pred HHHHHHHHHHhcCCCCEEEECC
Confidence 4556666666665666665543
No 81
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=29.50 E-value=28 Score=28.37 Aligned_cols=21 Identities=0% Similarity=-0.075 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHhhCCeeeec
Q 023334 156 QELIEILSYALVITKNHIYTS 176 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~TS 176 (283)
.+.++++..++...|.+|++.
T Consensus 99 ~~a~~~~~~~~~~~gd~vl~~ 119 (370)
T 2z61_A 99 SLGLFFALSSIIDDGDEVLIQ 119 (370)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEe
Confidence 455666666665555555443
No 82
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=29.39 E-value=25 Score=28.30 Aligned_cols=22 Identities=14% Similarity=-0.005 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHhhCCeeeecC
Q 023334 156 QELIEILSYALVITKNHIYTSG 177 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~TSG 177 (283)
.+.++++..++...|.+|++..
T Consensus 78 ~~a~~~~~~~l~~~gd~vl~~~ 99 (354)
T 3ly1_A 78 SEGIRAAIEAYASLEAQLVIPE 99 (354)
T ss_dssp HHHHHHHHHHHCCTTCEEEEES
T ss_pred HHHHHHHHHHHhCCCCeEEECC
Confidence 3455555555555555555443
No 83
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=29.39 E-value=23 Score=31.90 Aligned_cols=19 Identities=58% Similarity=0.928 Sum_probs=13.5
Q ss_pred eeecCC--CCchHHHHHhhhhh
Q 023334 173 IYTSGA--SGTNAAVIRGALRA 192 (283)
Q Consensus 173 i~TSGA--~GTNAAvIRGaLrA 192 (283)
|+|||+ .|.||| |||+.|.
T Consensus 7 IltsGGdapGmNaa-ir~vv~~ 27 (320)
T 1pfk_A 7 VLTSGGDAPGMNAA-IRGVVRS 27 (320)
T ss_dssp EEECSSCCTTHHHH-HHHHHHH
T ss_pred EEccCCCchhHHHH-HHHHHHH
Confidence 689998 699973 4555553
No 84
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=29.38 E-value=23 Score=31.88 Aligned_cols=19 Identities=53% Similarity=0.749 Sum_probs=13.9
Q ss_pred eeecCC--CCchHHHHHhhhhh
Q 023334 173 IYTSGA--SGTNAAVIRGALRA 192 (283)
Q Consensus 173 i~TSGA--~GTNAAvIRGaLrA 192 (283)
|+|||+ .|.||| |||+.|.
T Consensus 6 IltsGGdapGmNaa-ir~vv~~ 26 (319)
T 1zxx_A 6 ILTSGGDAPGMNAA-VRAVTRV 26 (319)
T ss_dssp EEECSSCCTTHHHH-HHHHHHH
T ss_pred EEccCCCchhHHHH-HHHHHHH
Confidence 689998 699974 5666554
No 85
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=29.09 E-value=19 Score=28.36 Aligned_cols=19 Identities=11% Similarity=-0.149 Sum_probs=9.6
Q ss_pred eeeecCCCCchHHHHHhhh
Q 023334 172 HIYTSGASGTNAAVIRGAL 190 (283)
Q Consensus 172 hi~TSGA~GTNAAvIRGaL 190 (283)
-++|+|++..+.+++++.+
T Consensus 55 v~~t~g~t~a~~~~~~~~~ 73 (353)
T 2yrr_A 55 AALAGSGSLGMEAGLANLD 73 (353)
T ss_dssp EEESSCHHHHHHHHHHTCS
T ss_pred EEEcCCcHHHHHHHHHHhc
Confidence 3455555555555555443
No 86
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=28.96 E-value=36 Score=27.97 Aligned_cols=19 Identities=26% Similarity=0.344 Sum_probs=8.7
Q ss_pred CeeeecCCCCchHHHHHhh
Q 023334 171 NHIYTSGASGTNAAVIRGA 189 (283)
Q Consensus 171 Nhi~TSGA~GTNAAvIRGa 189 (283)
+-++|+|++..+.++++..
T Consensus 87 ~i~~~~g~~~a~~~~~~~~ 105 (410)
T 3e2y_A 87 EILVAVGAYGSLFNSIQGL 105 (410)
T ss_dssp SEEEESHHHHHHHHHHHHH
T ss_pred CEEEeCCcHHHHHHHHHHh
Confidence 4444444444444444444
No 87
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=28.85 E-value=23 Score=29.38 Aligned_cols=20 Identities=25% Similarity=0.273 Sum_probs=11.5
Q ss_pred CeeeecCCCCchHHHHHhhh
Q 023334 171 NHIYTSGASGTNAAVIRGAL 190 (283)
Q Consensus 171 Nhi~TSGA~GTNAAvIRGaL 190 (283)
+-++|+|++..+.+++++.+
T Consensus 93 ~i~~t~g~~~al~~~~~~l~ 112 (385)
T 1b5p_A 93 ETIVTVGGSQALFNLFQAIL 112 (385)
T ss_dssp GEEEESHHHHHHHHHHHHHC
T ss_pred HEEEcCChHHHHHHHHHHhc
Confidence 45556666666656665554
No 88
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=28.79 E-value=33 Score=27.71 Aligned_cols=21 Identities=5% Similarity=-0.266 Sum_probs=12.6
Q ss_pred CCeeeecCCCCchHHHHHhhh
Q 023334 170 KNHIYTSGASGTNAAVIRGAL 190 (283)
Q Consensus 170 gNhi~TSGA~GTNAAvIRGaL 190 (283)
.+-++|+|++..+.+++++.+
T Consensus 82 ~~i~~t~g~~~a~~~~~~~~~ 102 (377)
T 3fdb_A 82 EWIFPIPDVVRGLYIAIDHFT 102 (377)
T ss_dssp GGEEEESCHHHHHHHHHHHHS
T ss_pred HHEEEeCChHHHHHHHHHHhc
Confidence 455666666666666666554
No 89
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=28.64 E-value=40 Score=27.32 Aligned_cols=21 Identities=19% Similarity=0.249 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHhhCCeeeec
Q 023334 156 QELIEILSYALVITKNHIYTS 176 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~TS 176 (283)
.+.++++..++...|.+|++.
T Consensus 92 ~~a~~~~~~~l~~~gd~vl~~ 112 (365)
T 3get_A 92 DQVIEFAIHSKLNSKNAFLQA 112 (365)
T ss_dssp HHHHHHHHHHHCCTTCEEEEC
T ss_pred HHHHHHHHHHHhCCCCEEEEe
Confidence 445555555555555555544
No 90
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=28.59 E-value=46 Score=26.56 Aligned_cols=28 Identities=29% Similarity=0.261 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhhCCeeeecCCCCchH
Q 023334 156 QELIEILSYALVITKNHIYTSGASGTNA 183 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~TSGA~GTNA 183 (283)
..|.+.+..|+...-.-|+|||++|...
T Consensus 53 ~~i~~al~~a~~~~~DlVittGG~s~g~ 80 (164)
T 3pzy_A 53 SPVGEALRKAIDDDVDVILTSGGTGIAP 80 (164)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 5667777777654567899999999764
No 91
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=28.52 E-value=43 Score=26.36 Aligned_cols=32 Identities=19% Similarity=0.151 Sum_probs=23.2
Q ss_pred cchhHHHHHHHHHHHHHh-hCCeeeecCCCCch
Q 023334 151 MGFMHQELIEILSYALVI-TKNHIYTSGASGTN 182 (283)
Q Consensus 151 vp~~hq~LIEllsyALvl-~gNhi~TSGA~GTN 182 (283)
+|=-...|.|.+..|+.. .-.-|+|||++|..
T Consensus 52 v~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 84 (167)
T 1uuy_A 52 VPDEVERIKDILQKWSDVDEMDLILTLGGTGFT 84 (167)
T ss_dssp ECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred cCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 333346677888887753 56789999999975
No 92
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=28.37 E-value=34 Score=28.18 Aligned_cols=20 Identities=15% Similarity=0.087 Sum_probs=13.4
Q ss_pred hcCCCCC---CCChHHHHhhhhH
Q 023334 224 IEKPHND---HLPLIEASRLCNM 243 (283)
Q Consensus 224 VE~PeND---~LpL~eAS~lCN~ 243 (283)
++.|.|- -+|+.+-..+|.+
T Consensus 179 ~~~~~nptG~~~~~~~l~~~~~~ 201 (398)
T 3a2b_A 179 TDGIFSMEGDIVNLPELTSIANE 201 (398)
T ss_dssp EESBCTTTCCBCCHHHHHHHHHH
T ss_pred EeCCCCCCCCccCHHHHHHHHHH
Confidence 4666553 5678787788875
No 93
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=28.25 E-value=18 Score=30.45 Aligned_cols=38 Identities=16% Similarity=0.090 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHH-------HhhCCeeeecCCCCchHHHHHhhhhh
Q 023334 155 HQELIEILSYAL-------VITKNHIYTSGASGTNAAVIRGALRA 192 (283)
Q Consensus 155 hq~LIEllsyAL-------vl~gNhi~TSGA~GTNAAvIRGaLrA 192 (283)
+..|-|-++.-+ +-..+-++|+|++..+.+++++.++.
T Consensus 85 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~ 129 (444)
T 3if2_A 85 DSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGA 129 (444)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEE
T ss_pred CHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCC
Confidence 445555555444 23467889999999999999988654
No 94
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=28.23 E-value=45 Score=26.72 Aligned_cols=51 Identities=12% Similarity=0.008 Sum_probs=33.2
Q ss_pred HHHHHHH-HHhcCCceEEEecccccchhHHHHHHHHHHHHHh-hCCeeeecCCCCch
Q 023334 128 YLQELLA-IQQQGPRAIGFFGTRNMGFMHQELIEILSYALVI-TKNHIYTSGASGTN 182 (283)
Q Consensus 128 ~lqELaa-IQq~G~rrIa~lGsRhvp~~hq~LIEllsyALvl-~gNhi~TSGA~GTN 182 (283)
++.++.. +.+.|-.. ..+ .+|=-...|.+.+..|+.. .-.-|+|||++|..
T Consensus 29 ~l~~~l~~l~~~G~~v--~~~--iv~Dd~~~I~~~l~~~~~~~~~DlVittGG~g~g 81 (178)
T 2pbq_A 29 AIIDYLKDVIITPFEV--EYR--VIPDERDLIEKTLIELADEKGCSLILTTGGTGPA 81 (178)
T ss_dssp HHHHHHHHHBCSCCEE--EEE--EECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred HHHHHHHHHHhCCCEE--EEE--EcCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 5554432 22567543 222 5555567788888888763 56899999999976
No 95
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=28.10 E-value=41 Score=27.50 Aligned_cols=22 Identities=18% Similarity=0.126 Sum_probs=15.8
Q ss_pred CC-eeeecCCCCchHHHHHhhhh
Q 023334 170 KN-HIYTSGASGTNAAVIRGALR 191 (283)
Q Consensus 170 gN-hi~TSGA~GTNAAvIRGaLr 191 (283)
.+ -++|+|++..+.++++..++
T Consensus 87 ~~~v~~~~g~~~a~~~~~~~~~~ 109 (389)
T 1gd9_A 87 KTEIMVLLGANQAFLMGLSAFLK 109 (389)
T ss_dssp TTSEEEESSTTHHHHHHHTTTCC
T ss_pred CCeEEEcCChHHHHHHHHHHhCC
Confidence 35 67788888777777777643
No 96
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=28.01 E-value=40 Score=26.77 Aligned_cols=16 Identities=13% Similarity=0.241 Sum_probs=7.0
Q ss_pred eeecCCCCchHHHHHh
Q 023334 173 IYTSGASGTNAAVIRG 188 (283)
Q Consensus 173 i~TSGA~GTNAAvIRG 188 (283)
++|+|++..|.++++.
T Consensus 63 ~~~~~gt~a~~~al~~ 78 (356)
T 1v72_A 63 FLVPTGTAANALCLSA 78 (356)
T ss_dssp EEESCHHHHHHHHHHT
T ss_pred EEeCCccHHHHHHHHH
Confidence 4444444444444444
No 97
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=27.76 E-value=33 Score=27.21 Aligned_cols=18 Identities=22% Similarity=0.171 Sum_probs=8.3
Q ss_pred eeeecCCCCchHHHHHhh
Q 023334 172 HIYTSGASGTNAAVIRGA 189 (283)
Q Consensus 172 hi~TSGA~GTNAAvIRGa 189 (283)
-++|+|++..+.++++++
T Consensus 59 v~~~~g~t~a~~~~~~~~ 76 (366)
T 1m32_A 59 VLLQGSGSYAVEAVLGSA 76 (366)
T ss_dssp EEEESCHHHHHHHHHHHS
T ss_pred EEEecChHHHHHHHHHHh
Confidence 344444444444444444
No 98
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=27.58 E-value=30 Score=29.03 Aligned_cols=45 Identities=9% Similarity=0.177 Sum_probs=28.2
Q ss_pred hHHHHHHHHHh--------cCCceEEEecccccchhHHHHHHHHHHHHHhhCCeeeecC
Q 023334 127 DYLQELLAIQQ--------QGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSG 177 (283)
Q Consensus 127 D~lqELaaIQq--------~G~rrIa~lGsRhvp~~hq~LIEllsyALvl~gNhi~TSG 177 (283)
++-+.++..-. ..+..|.+.. --++.++++..++...|..|++..
T Consensus 87 ~lr~~la~~~~~~~g~~~~~~~~~i~~~~------G~~~ai~~~~~~~~~~gd~Vl~~~ 139 (428)
T 1iay_A 87 EFRKAIAKFMEKTRGGRVRFDPERVVMAG------GATGANETIIFCLADPGDAFLVPS 139 (428)
T ss_dssp HHHHHHHHHHHHHTTTCSCCCTTSCEEEE------HHHHHHHHHHHHHCCTTCEEEEES
T ss_pred HHHHHHHHHHHHhcCCCCCCChhhEEEcc------ChHHHHHHHHHHhCCCCCeEEEcc
Confidence 36666776654 2244554332 236788888888877777777653
No 99
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=27.55 E-value=58 Score=26.84 Aligned_cols=45 Identities=29% Similarity=0.332 Sum_probs=21.2
Q ss_pred hhHHHHHHHHHhcCC-----ceEEEecccccchhHHHHHHHHHHHHHhhCCeeeecC
Q 023334 126 VDYLQELLAIQQQGP-----RAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSG 177 (283)
Q Consensus 126 vD~lqELaaIQq~G~-----rrIa~lGsRhvp~~hq~LIEllsyALvl~gNhi~TSG 177 (283)
+|+.......|..++ ++|||+|.-+|+-. ++..|...|+.++-..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~-------~a~~l~~~g~~V~~~~ 60 (316)
T 2uyy_A 11 VDLGTENLYFQSMGSITPTDKKIGFLGLGLMGSG-------IVSNLLKMGHTVTVWN 60 (316)
T ss_dssp --------------CCCCCSSCEEEECCSHHHHH-------HHHHHHHTTCCEEEEC
T ss_pred cCccccceeecCCCCCCCCCCeEEEEcccHHHHH-------HHHHHHhCCCEEEEEe
Confidence 677777777776555 78999999887753 3445556677765443
No 100
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=27.45 E-value=32 Score=28.30 Aligned_cols=21 Identities=14% Similarity=0.113 Sum_probs=13.0
Q ss_pred CCeeeecCCCCchHHHHHhhh
Q 023334 170 KNHIYTSGASGTNAAVIRGAL 190 (283)
Q Consensus 170 gNhi~TSGA~GTNAAvIRGaL 190 (283)
.+-++|+|++..+.+++++.+
T Consensus 88 ~~v~~t~g~~~al~~~~~~l~ 108 (390)
T 1d2f_A 88 QTVVYGPSVIYMVSELIRQWS 108 (390)
T ss_dssp GGEEEESCHHHHHHHHHHHSS
T ss_pred HHEEEcCCHHHHHHHHHHHhc
Confidence 455666666666666666554
No 101
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=27.40 E-value=41 Score=28.59 Aligned_cols=21 Identities=19% Similarity=0.058 Sum_probs=13.0
Q ss_pred HhcCCCC---CCCChHHHHhhhhH
Q 023334 223 VIEKPHN---DHLPLIEASRLCNM 243 (283)
Q Consensus 223 lVE~PeN---D~LpL~eAS~lCN~ 243 (283)
++|.|.| .-.++.+-..+|.+
T Consensus 145 ~~~~~~n~~G~~~~l~~i~~l~~~ 168 (412)
T 2cb1_A 145 FVETVANPALLVPDLEALATLAEE 168 (412)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHH
T ss_pred EEeCCCCCCcccccHHHHHHHHHH
Confidence 3455555 34677777777765
No 102
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=27.20 E-value=51 Score=28.62 Aligned_cols=36 Identities=17% Similarity=0.245 Sum_probs=24.1
Q ss_pred hCCeeeecCCCCchHHHH---HhhhhhcCCCceeEeeccc
Q 023334 169 TKNHIYTSGASGTNAAVI---RGALRAERPDLLTVILPQS 205 (283)
Q Consensus 169 ~gNhi~TSGA~GTNAAvI---RGaLrAe~P~lLTViLPQS 205 (283)
-||-++-.|+.|...|++ ++|||+ -..++||..|++
T Consensus 30 ~G~vlvigGs~~~~GA~~laa~aAlr~-GaGlv~~~~~~~ 68 (279)
T 3rpz_A 30 YGTALLLAGSDDMPGAALLAGLGAMRS-GLGKLVIGTSEN 68 (279)
T ss_dssp GCEEEEECCBTTBCHHHHHHHHHHHTT-TCSEEEEEECTT
T ss_pred CCEEEEEeCCCCCCcHHHHHHHHHHHh-CCCeEEEEecHH
Confidence 356666666666555554 777787 777777777665
No 103
>1v9v_A KIAA0561 protein; helix bundle, MAST205, microtubule-associated serine/threonine protein kinase, structural genomics; NMR {Homo sapiens} SCOP: a.29.10.1
Probab=27.03 E-value=20 Score=29.32 Aligned_cols=42 Identities=21% Similarity=0.381 Sum_probs=31.1
Q ss_pred HHhcCCceEEEecccccchhHHHHHHHHHHHHHhhCCeeeec
Q 023334 135 IQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTS 176 (283)
Q Consensus 135 IQq~G~rrIa~lGsRhvp~~hq~LIEllsyALvl~gNhi~TS 176 (283)
|....+....=++.--..|+|-|+||+-.-.|-.+..-++||
T Consensus 22 i~~~~~~~~~~laDgvl~FiHHQiiElARDCL~KSr~~LITs 63 (114)
T 1v9v_A 22 LTAYAPGARLALADGVLGFIHHQIVELARDCLAKSGENLVTS 63 (114)
T ss_dssp HHHSCBTTTBCCSCHHHHHHHHHHHHHHHHHHHHHHHTCCCH
T ss_pred HHhcCccccccchHHHHHHHHHHHHHHHHHHHHHHHccchHH
Confidence 344455555455666678999999999988888887777776
No 104
>3ml1_A NAPA, periplasmic nitrate reductase; heterodimer, oxidoreductase; HET: MGD HEC; 1.60A {Ralstonia eutropha} PDB: 3o5a_A* 1ogy_A* 2nya_A*
Probab=26.50 E-value=89 Score=30.49 Aligned_cols=35 Identities=29% Similarity=0.615 Sum_probs=25.6
Q ss_pred ccccCCC---hh-HHHHHHHHHh-cCCceEEEecccccch
Q 023334 119 EFKPVPD---VD-YLQELLAIQQ-QGPRAIGFFGTRNMGF 153 (283)
Q Consensus 119 ~~~~~p~---vD-~lqELaaIQq-~G~rrIa~lGsRhvp~ 153 (283)
+++++.- +| ++++|..|++ .|+..|+++||-.+..
T Consensus 87 ~~~~isWdeAl~~ia~~l~~i~~~~G~~si~~~~sg~~~~ 126 (802)
T 3ml1_A 87 DFAPVTWDQAFDEMERQFKRVLKEKGPTAVGMFGSGQWTV 126 (802)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHHHTCGGGEEEEECTTSCH
T ss_pred CeEEeCHHHHHHHHHHHHHHHHHhcCCCeEEEEeCCCCch
Confidence 4555552 66 6788888765 6999999999877654
No 105
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=26.47 E-value=29 Score=27.56 Aligned_cols=36 Identities=11% Similarity=0.159 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHh--hCCeeeecCCCCchHHHHHhhh
Q 023334 155 HQELIEILSYALVI--TKNHIYTSGASGTNAAVIRGAL 190 (283)
Q Consensus 155 hq~LIEllsyALvl--~gNhi~TSGA~GTNAAvIRGaL 190 (283)
...+.|.++.-+-. ..+-++|+|++..+.+++++.+
T Consensus 45 ~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~ 82 (362)
T 3ffr_A 45 YKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCV 82 (362)
T ss_dssp HHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhcc
Confidence 34455555544422 2346778888888888888776
No 106
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=26.27 E-value=22 Score=34.73 Aligned_cols=30 Identities=13% Similarity=0.138 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHhhCCeeeecCCCCchHHHHHh
Q 023334 157 ELIEILSYALVITKNHIYTSGASGTNAAVIRG 188 (283)
Q Consensus 157 ~LIEllsyALvl~gNhi~TSGA~GTNAAvIRG 188 (283)
..++++-.|++..|.+|+++-- ...+++.|
T Consensus 200 ~an~~ai~al~~pGD~VLv~~~--~H~S~~~~ 229 (730)
T 1c4k_A 200 NANNTVTSALVSNGDLVLFDRN--NHKSVYNS 229 (730)
T ss_dssp HHHHHHHHHHCCTTCEEEEETT--CCHHHHHH
T ss_pred HHHHHHHHHhcCCCCEEEEcCC--chHHHHHH
Confidence 4556666666666777666532 34455555
No 107
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=26.24 E-value=45 Score=27.47 Aligned_cols=16 Identities=6% Similarity=-0.157 Sum_probs=8.4
Q ss_pred ecCCCCchHHHHHhhh
Q 023334 175 TSGASGTNAAVIRGAL 190 (283)
Q Consensus 175 TSGA~GTNAAvIRGaL 190 (283)
|+|+++.+..++++..
T Consensus 102 t~G~~~al~~~~~~l~ 117 (401)
T 7aat_A 102 GISGTGSLRVGANFLQ 117 (401)
T ss_dssp EEHHHHHHHHHHHHHH
T ss_pred cCcchHHHHHHHHHHH
Confidence 5555555555555443
No 108
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=26.15 E-value=60 Score=26.76 Aligned_cols=40 Identities=10% Similarity=0.045 Sum_probs=28.4
Q ss_pred chhHHHHHHHHHHHHHhhCCeeeecCCCCchHHHHHhhhhh
Q 023334 152 GFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRA 192 (283)
Q Consensus 152 p~~hq~LIEllsyALvl~gNhi~TSGA~GTNAAvIRGaLrA 192 (283)
.-.++.|.|.++.-+- ..+-++|+|++..|.++|+.+.+.
T Consensus 77 ~~~~~~l~~~la~~~~-~~~v~~~~gg~ea~~~al~~~~~~ 116 (395)
T 3nx3_A 77 NENIAAAAKNLAKASA-LERVFFTNSGTESIEGAMKTARKY 116 (395)
T ss_dssp CHHHHHHHHHHHHHHT-CSEEEEESSHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcC-CCeEEEeCCHHHHHHHHHHHHHHH
Confidence 3456666666665442 457789999999999999877654
No 109
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=26.12 E-value=35 Score=28.78 Aligned_cols=22 Identities=9% Similarity=0.101 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHhhCCeeeec
Q 023334 155 HQELIEILSYALVITKNHIYTS 176 (283)
Q Consensus 155 hq~LIEllsyALvl~gNhi~TS 176 (283)
-.+.++++..++...|..|++.
T Consensus 120 g~~a~~~~~~~l~~~gd~vl~~ 141 (435)
T 3piu_A 120 ATSANETFIFCLADPGEAVLIP 141 (435)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEE
T ss_pred hHHHHHHHHHHhcCCCCeEEEC
Confidence 3456666666666666666553
No 110
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=26.01 E-value=37 Score=28.24 Aligned_cols=53 Identities=13% Similarity=0.089 Sum_probs=30.4
Q ss_pred ccccCCCh-hHHHHHHH-HHh-cCCc---eEEEecccccchhHHHHHHHHHHHHHhhCCeeeecC
Q 023334 119 EFKPVPDV-DYLQELLA-IQQ-QGPR---AIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSG 177 (283)
Q Consensus 119 ~~~~~p~v-D~lqELaa-IQq-~G~r---rIa~lGsRhvp~~hq~LIEllsyALvl~gNhi~TSG 177 (283)
.|.+.... ++.++++. +.. .|+. .|.+..+ -++.++++..++...|.+|++.-
T Consensus 75 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g------~~~al~~~~~~l~~~gd~Vl~~~ 133 (418)
T 3rq1_A 75 GYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAG------GTGGIHHLIHNYTEPGDEVLTAD 133 (418)
T ss_dssp SCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESH------HHHHHHHHHHHHSCTTCEEEEES
T ss_pred CCCCCCChHHHHHHHHHHHhcccCccccccEEECCc------hHHHHHHHHHHhcCCCCEEEECC
Confidence 45554333 36677766 322 3455 5544432 35667777777777777777654
No 111
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=25.93 E-value=35 Score=27.55 Aligned_cols=21 Identities=10% Similarity=0.131 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHhhCCeeeec
Q 023334 156 QELIEILSYALVITKNHIYTS 176 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~TS 176 (283)
.+-++++-.++...|..+++.
T Consensus 81 t~al~~~~~~~~~~gd~vi~~ 101 (376)
T 3f0h_A 81 TGSMEAVVMNCFTKKDKVLVI 101 (376)
T ss_dssp HHHHHHHHHHHCCTTCCEEEE
T ss_pred hHHHHHHHHhccCCCCeEEEE
Confidence 356677777776667666554
No 112
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=25.87 E-value=48 Score=27.42 Aligned_cols=22 Identities=18% Similarity=0.286 Sum_probs=13.6
Q ss_pred CCeeeecCCCCchHHHHHhhhh
Q 023334 170 KNHIYTSGASGTNAAVIRGALR 191 (283)
Q Consensus 170 gNhi~TSGA~GTNAAvIRGaLr 191 (283)
.+-++|+|++..+.+++++.++
T Consensus 92 ~~i~~~~g~~~a~~~~~~~~~~ 113 (422)
T 3fvs_A 92 RNVLVTVGGYGALFTAFQALVD 113 (422)
T ss_dssp HHEEEESHHHHHHHHHHHHHCC
T ss_pred CcEEEECChHHHHHHHHHHHcC
Confidence 3566666666666666666543
No 113
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=25.76 E-value=53 Score=26.79 Aligned_cols=19 Identities=11% Similarity=0.141 Sum_probs=8.6
Q ss_pred HHHHHHHHHHhhCCeeeec
Q 023334 158 LIEILSYALVITKNHIYTS 176 (283)
Q Consensus 158 LIEllsyALvl~gNhi~TS 176 (283)
-++++..++...|.+|+++
T Consensus 76 al~~~~~~~~~~gd~Vl~~ 94 (411)
T 3nnk_A 76 GIEAILVSAIRPGDKVLVP 94 (411)
T ss_dssp HHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEe
Confidence 3444444444444444443
No 114
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=25.76 E-value=34 Score=30.12 Aligned_cols=55 Identities=20% Similarity=0.129 Sum_probs=32.5
Q ss_pred CCceEEEecccccchhHHHHHHHHHHHHHhhCCee----eecCCCCchHHHHHhhhhhcCCCceeEeec
Q 023334 139 GPRAIGFFGTRNMGFMHQELIEILSYALVITKNHI----YTSGASGTNAAVIRGALRAERPDLLTVILP 203 (283)
Q Consensus 139 G~rrIa~lGsRhvp~~hq~LIEllsyALvl~gNhi----~TSGA~GTNAAvIRGaLrAe~P~lLTViLP 203 (283)
.++.|-|+|||+. .|.+|+-. |.....+.+ . .|++=||-.. +.. ..|++|-|+=|
T Consensus 65 ~~~~iLfVgtk~~---~~~~V~~~--A~~~g~~yv~~~RW-lgG~LTN~~t--~~~--~~PdlliV~Dp 123 (241)
T 2xzm_B 65 HPEDVMVVCSRIY---GQRAAIKF--AGYTHCKSTSSSRW-TPGTLTNYQT--LKY--EEPRVLIVTDP 123 (241)
T ss_dssp SGGGEEEECCSHH---HHHHHHHH--HHHHTCBCCCCSSC-CTTTTTCTTC--TTC--CCCSEEEESCT
T ss_pred CCCeEEEEECCHH---HHHHHHHH--HHHhCCEEeccccc-cCCcccCccc--ccc--CCCCEEEEECC
Confidence 3678999999975 36666533 333333334 3 3777777643 333 25888776643
No 115
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=25.65 E-value=39 Score=28.11 Aligned_cols=12 Identities=0% Similarity=-0.380 Sum_probs=5.7
Q ss_pred HHHHHHHHHHHH
Q 023334 156 QELIEILSYALV 167 (283)
Q Consensus 156 q~LIEllsyALv 167 (283)
++.++++..++.
T Consensus 115 t~al~~~~~~l~ 126 (437)
T 3g0t_A 115 MQGCFVSFLVAN 126 (437)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 344455545544
No 116
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=25.56 E-value=2.8e+02 Score=22.82 Aligned_cols=93 Identities=17% Similarity=0.234 Sum_probs=50.7
Q ss_pred CCceEEEecccccchhHHHHHHHHHHHHHhh-CCeeee-cCCCCchH----------HHHHhhhhhcCCCceeEeecccc
Q 023334 139 GPRAIGFFGTRNMGFMHQELIEILSYALVIT-KNHIYT-SGASGTNA----------AVIRGALRAERPDLLTVILPQSL 206 (283)
Q Consensus 139 G~rrIa~lGsRhvp~~hq~LIEllsyALvl~-gNhi~T-SGA~GTNA----------AvIRGaLrAe~P~lLTViLPQSL 206 (283)
.+.||||+|.-+|+-.|-. +|... +..++. ..-..-.+ .-.+-++..+++|.+-|..|...
T Consensus 9 ~~~~igiIG~G~~g~~~~~-------~l~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~~~ 81 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIR-------TIAGLPGAALVRLASSNPDNLALVPPGCVIESDWRSVVSAPEVEAVIIATPPAT 81 (315)
T ss_dssp CCEEEEEEECTTTTTTHHH-------HHHHCTTEEEEEEEESCHHHHTTCCTTCEEESSTHHHHTCTTCCEEEEESCGGG
T ss_pred CcceEEEECCcHHHHHHHH-------HHHhCCCcEEEEEEeCCHHHHHHHHhhCcccCCHHHHhhCCCCCEEEEeCChHH
Confidence 4568999999999865532 22222 333321 11000000 01234455458899999998765
Q ss_pred cCCChhHHHHHHHHhh-HhcCCCCCCCChHHHHhhhh
Q 023334 207 KKQPPESQELLAKVKT-VIEKPHNDHLPLIEASRLCN 242 (283)
Q Consensus 207 ~kQp~ESqelLe~V~h-lVE~PeND~LpL~eAS~lCN 242 (283)
- .+-..+.|+.=+| ++|||-- +++.+|.++..
T Consensus 82 h--~~~~~~al~~Gk~v~~eKP~~--~~~~~~~~l~~ 114 (315)
T 3c1a_A 82 H--AEITLAAIASGKAVLVEKPLT--LDLAEAEAVAA 114 (315)
T ss_dssp H--HHHHHHHHHTTCEEEEESSSC--SCHHHHHHHHH
T ss_pred H--HHHHHHHHHCCCcEEEcCCCc--CCHHHHHHHHH
Confidence 3 2223344444344 4799853 56778777654
No 117
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=25.49 E-value=81 Score=25.80 Aligned_cols=20 Identities=10% Similarity=0.134 Sum_probs=10.7
Q ss_pred HHHHHHHHHH-HhhCCeeeec
Q 023334 157 ELIEILSYAL-VITKNHIYTS 176 (283)
Q Consensus 157 ~LIEllsyAL-vl~gNhi~TS 176 (283)
+.++++..++ ...|.+|+++
T Consensus 64 ~al~~~l~~l~~~~gd~Vi~~ 84 (388)
T 1b9h_A 64 HALELALQVMGVGPGTEVIVP 84 (388)
T ss_dssp HHHHHHHHHTTCCTTCEEEEE
T ss_pred HHHHHHHHHcCCCCcCEEEEC
Confidence 4555555555 4445555554
No 118
>3gtz_A Putative translation initiation inhibitor; structural genomics, unknown function, PSI-2, protein struct initiative; 2.50A {Salmonella typhimurium}
Probab=25.07 E-value=17 Score=27.91 Aligned_cols=15 Identities=20% Similarity=0.372 Sum_probs=12.9
Q ss_pred hhCCeeeecCCCCch
Q 023334 168 ITKNHIYTSGASGTN 182 (283)
Q Consensus 168 l~gNhi~TSGA~GTN 182 (283)
..||.||+||-.|.+
T Consensus 19 ~~g~~lfvSGq~~~d 33 (124)
T 3gtz_A 19 IYNNTLWYTGVPENL 33 (124)
T ss_dssp EETTEEEEEECCSCT
T ss_pred EECCEEEEeccCCCC
Confidence 459999999998876
No 119
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=24.87 E-value=60 Score=26.70 Aligned_cols=48 Identities=15% Similarity=0.145 Sum_probs=31.3
Q ss_pred HHHHHHHHHhcCCc--eEEEecccccchhHHHHHHHHHHHHHhhCCeeeecCCCCchH
Q 023334 128 YLQELLAIQQQGPR--AIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNA 183 (283)
Q Consensus 128 ~lqELaaIQq~G~r--rIa~lGsRhvp~~hq~LIEllsyALvl~gNhi~TSGA~GTNA 183 (283)
++.++ +.+.|-. ++.+++- -...|.|.+..|+.. -.-|+|||++|...
T Consensus 27 ~l~~~--L~~~G~~v~~~~iv~D-----d~~~I~~~l~~a~~~-~DlVittGG~g~~~ 76 (172)
T 3kbq_A 27 FIGNF--LTYHGYQVRRGFVVMD-----DLDEIGWAFRVALEV-SDLVVSSGGLGPTF 76 (172)
T ss_dssp HHHHH--HHHTTCEEEEEEEECS-----CHHHHHHHHHHHHHH-CSEEEEESCCSSST
T ss_pred HHHHH--HHHCCCEEEEEEEeCC-----CHHHHHHHHHHHHhc-CCEEEEcCCCcCCc
Confidence 45443 3445643 3444443 356778888877664 78999999999765
No 120
>3kjj_A NMB1025 protein; YJGF protein family, OPPF, structural genomics, oxford protein production facility, UN function; 1.90A {Neisseria meningitidis serogroup B} PDB: 3kjk_A
Probab=24.82 E-value=20 Score=27.84 Aligned_cols=16 Identities=31% Similarity=0.331 Sum_probs=13.3
Q ss_pred HhhCCeeeecCCCCch
Q 023334 167 VITKNHIYTSGASGTN 182 (283)
Q Consensus 167 vl~gNhi~TSGA~GTN 182 (283)
+..||.||+||-.|.+
T Consensus 24 v~~g~~lfvSGq~~~d 39 (128)
T 3kjj_A 24 VGANGLIFLSGMVPEN 39 (128)
T ss_dssp EEETTEEEECCBCCSS
T ss_pred EEECCEEEEeecCCCC
Confidence 3469999999998876
No 121
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=24.79 E-value=43 Score=27.98 Aligned_cols=19 Identities=21% Similarity=0.183 Sum_probs=9.7
Q ss_pred CeeeecCCCCchHHHHHhh
Q 023334 171 NHIYTSGASGTNAAVIRGA 189 (283)
Q Consensus 171 Nhi~TSGA~GTNAAvIRGa 189 (283)
+-++|+|++..+.+++++.
T Consensus 49 ~v~~~~ggt~al~~~~~~l 67 (394)
T 1o69_A 49 NALALNSATAALHLALRVA 67 (394)
T ss_dssp EEEEESCHHHHHHHHHHHT
T ss_pred cEEEeCCHHHHHHHHHHHc
Confidence 4455555555555555544
No 122
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=24.66 E-value=46 Score=28.15 Aligned_cols=21 Identities=5% Similarity=0.020 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHhhCCeeeec
Q 023334 156 QELIEILSYALVITKNHIYTS 176 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~TS 176 (283)
++.++++..++...|.+|++.
T Consensus 118 ~~al~~~~~~l~~~gd~Vlv~ 138 (425)
T 2r2n_A 118 QQGLCKVFEMIINPGDNVLLD 138 (425)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEe
Confidence 566666666666566665554
No 123
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=24.48 E-value=56 Score=26.66 Aligned_cols=21 Identities=24% Similarity=0.186 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHhhCCeeeec
Q 023334 156 QELIEILSYALVITKNHIYTS 176 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~TS 176 (283)
++.++++..++...|.+|++.
T Consensus 97 ~~a~~~~~~~l~~~gd~vl~~ 117 (376)
T 2dou_A 97 QEGLAHLLLALTEPEDLLLLP 117 (376)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEC
Confidence 445555555554445555543
No 124
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=24.47 E-value=45 Score=27.46 Aligned_cols=42 Identities=5% Similarity=0.068 Sum_probs=22.6
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHH-HhhCCeeeecC
Q 023334 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYAL-VITKNHIYTSG 177 (283)
Q Consensus 128 ~lqELaaIQq~G~rrIa~lGsRhvp~~hq~LIEllsyAL-vl~gNhi~TSG 177 (283)
+-+.|+.+- |.+.+.+.++- .+-++++-.++ ...|.+|+++.
T Consensus 61 l~~~la~~~--~~~~~i~~~~g------t~al~~~l~~~~~~~gd~vl~~~ 103 (391)
T 3dr4_A 61 FEKAFADYC--GVKHAIACNNG------TTALHLALVAMGIGPGDEVIVPS 103 (391)
T ss_dssp HHHHHHHHH--TCSEEEEESSH------HHHHHHHHHHHTCCTTCEEEEES
T ss_pred HHHHHHHHh--CCCcEEEeCCH------HHHHHHHHHHcCCCCcCEEEECC
Confidence 445555543 33455555442 23456666666 55676777654
No 125
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=24.41 E-value=42 Score=27.37 Aligned_cols=13 Identities=23% Similarity=0.227 Sum_probs=6.8
Q ss_pred CCChHHHHhhhhH
Q 023334 231 HLPLIEASRLCNM 243 (283)
Q Consensus 231 ~LpL~eAS~lCN~ 243 (283)
-+|+.+-..+|.+
T Consensus 185 ~~~l~~i~~l~~~ 197 (420)
T 1t3i_A 185 VNPAEEIAQLAHQ 197 (420)
T ss_dssp BCCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHH
Confidence 3555555555543
No 126
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=24.20 E-value=35 Score=28.52 Aligned_cols=21 Identities=10% Similarity=-0.080 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHhhCCeeeec
Q 023334 156 QELIEILSYALVITKNHIYTS 176 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~TS 176 (283)
.+.++++..++...|.+|++.
T Consensus 111 ~~a~~~~~~~~~~~gd~Vl~~ 131 (429)
T 1yiz_A 111 YEALYATIQGHVDEGDEVIII 131 (429)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEc
Confidence 556666666666556655544
No 127
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=24.11 E-value=44 Score=27.84 Aligned_cols=20 Identities=20% Similarity=0.127 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHhhCCeeee
Q 023334 156 QELIEILSYALVITKNHIYT 175 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~T 175 (283)
.+.++++..++...|.+|++
T Consensus 109 ~~a~~~~~~~~~~~gd~Vl~ 128 (412)
T 2x5d_A 109 KEGLAHLMLATLDHGDTILV 128 (412)
T ss_dssp HHHHHHHHHHHCCTTCEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEE
Confidence 44455555555444444444
No 128
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=24.02 E-value=65 Score=26.29 Aligned_cols=20 Identities=5% Similarity=0.160 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHh--hCCeeee
Q 023334 156 QELIEILSYALVI--TKNHIYT 175 (283)
Q Consensus 156 q~LIEllsyALvl--~gNhi~T 175 (283)
.+.++++..++.. .|.+|++
T Consensus 104 ~~a~~~~~~~~~~~~~gd~Vl~ 125 (396)
T 2q7w_A 104 TGALRVAADFLAKNTSVKRVWV 125 (396)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEE
T ss_pred hhhHHHHHHHHHHhCCCCEEEE
Confidence 4555555554432 4544444
No 129
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=23.91 E-value=43 Score=28.09 Aligned_cols=20 Identities=0% Similarity=0.032 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHhhCCeeee
Q 023334 156 QELIEILSYALVITKNHIYT 175 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~T 175 (283)
++.++++..++...|.+|++
T Consensus 119 ~~al~~~~~~l~~~gd~Vl~ 138 (404)
T 2o1b_A 119 KNGLVAVPTCVINPGDYVLL 138 (404)
T ss_dssp HHHHHHHHHHHCCTTCEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEE
Confidence 34445555554444444443
No 130
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=23.89 E-value=42 Score=27.47 Aligned_cols=20 Identities=20% Similarity=0.225 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHhhCCeeee
Q 023334 156 QELIEILSYALVITKNHIYT 175 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~T 175 (283)
.+.++++..++...|.+|++
T Consensus 88 ~~a~~~~~~~~~~~gd~Vl~ 107 (381)
T 1v2d_A 88 TEALYVLLQSLVGPGDEVVV 107 (381)
T ss_dssp HHHHHHHHHHHCCTTCEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEE
Confidence 34455555555444444443
No 131
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=23.85 E-value=2.8e+02 Score=23.43 Aligned_cols=44 Identities=23% Similarity=0.200 Sum_probs=33.3
Q ss_pred ecccccchhHHHHHHHHHHHHHhhCCeeeecCCCCchHHHHHhhhhh
Q 023334 146 FGTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRA 192 (283)
Q Consensus 146 lGsRhvp~~hq~LIEllsyALvl~gNhi~TSGA~GTNAAvIRGaLrA 192 (283)
|||-. +-..+.++++.+|+-.+.|+|=|.-.=| |-..|--||+.
T Consensus 21 lGt~~--~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg-~E~~vG~al~~ 64 (317)
T 1qwk_A 21 LGTWQ--SSPAEVITAVKTAVKAGYRLIDTASVYQ-NEEAIGTAIKE 64 (317)
T ss_dssp EECTT--CCHHHHHHHHHHHHHHTCCEEECCGGGT-CHHHHHHHHHH
T ss_pred EECCc--CCHHHHHHHHHHHHHcCCCEEEcccccc-CHHHHHHHHHH
Confidence 46644 3467899999999999999999997777 45555555553
No 132
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=23.74 E-value=3.4e+02 Score=23.27 Aligned_cols=54 Identities=13% Similarity=0.099 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHhhCCeeeecCC-CCchHHHHHhhhhhcCCCceeEeecccccCCC
Q 023334 156 QELIEILSYALVITKNHIYTSGA-SGTNAAVIRGALRAERPDLLTVILPQSLKKQP 210 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~TSGA-~GTNAAvIRGaLrAe~P~lLTViLPQSL~kQp 210 (283)
.-+--++..|.......|+|.|| +|-.+..+--+-+. .==-.+|++|.......
T Consensus 67 R~~~~~l~~a~~~G~~~vv~~s~tsGN~g~alA~aa~~-~G~~~~iv~p~~~~~~~ 121 (342)
T 4d9b_A 67 RKLEFLVADALREGADTLITAGAIQSNHVRQTAAVAAK-LGLHCVALLENPIGTTA 121 (342)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHHHH-HTCEEEEEEECTTCCCC
T ss_pred HhHHHHHHHHHHcCCCEEEEcCCcccHHHHHHHHHHHH-hCCcEEEEEeCCCCCcc
Confidence 34445566666666678998876 44443222222222 22346899998876654
No 133
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=23.73 E-value=36 Score=29.86 Aligned_cols=38 Identities=18% Similarity=0.174 Sum_probs=28.9
Q ss_pred hHHHHHHHHHHHHHhh---CCeeeecCCCCchHHHHHhhhh
Q 023334 154 MHQELIEILSYALVIT---KNHIYTSGASGTNAAVIRGALR 191 (283)
Q Consensus 154 ~hq~LIEllsyALvl~---gNhi~TSGA~GTNAAvIRGaLr 191 (283)
+-+++++.++.-+-.. ++-++|+|||..|..+++++..
T Consensus 133 le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~ 173 (504)
T 2okj_A 133 MEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARY 173 (504)
T ss_dssp HHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHH
Confidence 4566777777766553 4679999999999999998853
No 134
>2nap_A Protein (periplasmic nitrate reductase); nitrogenous acceptor, dissimilatory nitrate reductase; HET: MGD MES; 1.90A {Desulfovibrio desulfuricans} SCOP: b.52.2.2 c.81.1.1 PDB: 2jim_A* 2jir_A* 2jip_A* 2v45_A* 2v3v_A* 2jiq_A* 2jio_A*
Probab=23.61 E-value=1.3e+02 Score=28.14 Aligned_cols=34 Identities=18% Similarity=0.424 Sum_probs=23.9
Q ss_pred ccccCCC---hh-HHHHHHHHHh-cCCceEEEecccccc
Q 023334 119 EFKPVPD---VD-YLQELLAIQQ-QGPRAIGFFGTRNMG 152 (283)
Q Consensus 119 ~~~~~p~---vD-~lqELaaIQq-~G~rrIa~lGsRhvp 152 (283)
+++++.= +| +++.|..|++ .|+..|+++|+....
T Consensus 75 ~~~~isWdeAl~~ia~~l~~~~~~~G~~~i~~~~~~~~~ 113 (723)
T 2nap_A 75 KLEPVSWDEALDLMASRFRSSIDMYGPNSVAWYGSGQCL 113 (723)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTSC
T ss_pred CEEEecHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCccc
Confidence 3555552 56 6678877765 599999999886554
No 135
>3k12_A Uncharacterized protein A6V7T0; structural genomics, unknown function, PSI-2, protein struct initiative; 1.49A {Pseudomonas aeruginosa}
Probab=23.54 E-value=15 Score=27.97 Aligned_cols=16 Identities=19% Similarity=0.501 Sum_probs=13.2
Q ss_pred hhCCeeeecCCCCchH
Q 023334 168 ITKNHIYTSGASGTNA 183 (283)
Q Consensus 168 l~gNhi~TSGA~GTNA 183 (283)
..||.||+||-.|.+.
T Consensus 16 ~~g~~vfvSGq~~~d~ 31 (122)
T 3k12_A 16 LHGNTVYIGGQVADDP 31 (122)
T ss_dssp EETTEEEEEEECCSST
T ss_pred EECCEEEEeeccCCCC
Confidence 4589999999888753
No 136
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=23.52 E-value=45 Score=27.21 Aligned_cols=41 Identities=12% Similarity=0.085 Sum_probs=21.8
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHH-HhhCCeeeec
Q 023334 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYAL-VITKNHIYTS 176 (283)
Q Consensus 128 ~lqELaaIQq~G~rrIa~lGsRhvp~~hq~LIEllsyAL-vl~gNhi~TS 176 (283)
+-++|+..- |.+.+.+.++ -.+.++++..++ ...|..|+++
T Consensus 44 l~~~la~~~--~~~~~~~~~~------gt~al~~~~~~~~~~~gd~Vl~~ 85 (393)
T 1mdo_A 44 LEAAFCRLT--GNQYAVAVSS------ATAGMHIALMALGIGEGDEVITP 85 (393)
T ss_dssp HHHHHHHHH--CCSEEEEESC------HHHHHHHHHHHTTCCTTCEEEEE
T ss_pred HHHHHHHHh--CCCcEEEecC------hHHHHHHHHHHcCCCCCCEEEeC
Confidence 444444443 3345544433 255667776666 5556666655
No 137
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=23.50 E-value=48 Score=27.23 Aligned_cols=20 Identities=0% Similarity=-0.169 Sum_probs=12.0
Q ss_pred hcCCCCCCCChHHHHhhhhH
Q 023334 224 IEKPHNDHLPLIEASRLCNM 243 (283)
Q Consensus 224 VE~PeND~LpL~eAS~lCN~ 243 (283)
+++|...-.++.+-..+|..
T Consensus 129 ~~~~~G~~~~~~~i~~la~~ 148 (367)
T 3nyt_A 129 PVSLYGQCADFDAINAIASK 148 (367)
T ss_dssp CBCGGGCCCCHHHHHHHHHH
T ss_pred eeCCccChhhHHHHHHHHHH
Confidence 44555555566666666654
No 138
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=23.38 E-value=42 Score=26.65 Aligned_cols=20 Identities=30% Similarity=0.400 Sum_probs=13.1
Q ss_pred HhcCCCC---CCCChHHHHhhhh
Q 023334 223 VIEKPHN---DHLPLIEASRLCN 242 (283)
Q Consensus 223 lVE~PeN---D~LpL~eAS~lCN 242 (283)
++..|+| .-+|+.+-.++|.
T Consensus 140 ~i~~p~nptG~~~~~~~l~~l~~ 162 (337)
T 3p1t_A 140 VLANPSNPTGQALSAGELDQLRQ 162 (337)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHH
T ss_pred EEeCCCCCCCCCCCHHHHHHHHH
Confidence 4555555 5678887777764
No 139
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=23.35 E-value=1e+02 Score=25.82 Aligned_cols=38 Identities=18% Similarity=0.132 Sum_probs=22.7
Q ss_pred hHHHHHHHHHHHHHh-hCCeeeecCCCCchHHHHHhhhh
Q 023334 154 MHQELIEILSYALVI-TKNHIYTSGASGTNAAVIRGALR 191 (283)
Q Consensus 154 ~hq~LIEllsyALvl-~gNhi~TSGA~GTNAAvIRGaLr 191 (283)
.+..|.|.++.-+-. ..+-++|+|++-.|.++|+.+.+
T Consensus 73 ~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~~~~~ 111 (430)
T 3i4j_A 73 VLEEYAGRLARFVGLPTFRFWAVSGGSEATESAVKLARQ 111 (430)
T ss_dssp HHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHH
Confidence 455565655543321 23567777777777777776654
No 140
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=23.30 E-value=34 Score=28.25 Aligned_cols=43 Identities=5% Similarity=0.022 Sum_probs=23.3
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHhhCCeeeec
Q 023334 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTS 176 (283)
Q Consensus 128 ~lqELaaIQq~G~rrIa~lGsRhvp~~hq~LIEllsyALvl~gNhi~TS 176 (283)
+.++|+..-...+..|.+..+ -++.++++..++...|.+|++.
T Consensus 79 l~~~la~~~g~~~~~v~~~~g------~~~al~~~~~~~~~~gd~Vl~~ 121 (397)
T 2zyj_A 79 LRAFVAEWIGVRPEEVLITTG------SQQALDLVGKVFLDEGSPVLLE 121 (397)
T ss_dssp HHHHHHHHHTSCGGGEEEESH------HHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHhCCChhhEEEecc------HHHHHHHHHHHhCCCCCEEEEe
Confidence 555555554322334443321 3566777777776666666664
No 141
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=23.27 E-value=57 Score=26.39 Aligned_cols=32 Identities=19% Similarity=0.159 Sum_probs=22.7
Q ss_pred cCCceEEEecccccchhHHHHHHHHHHHHHhhCCeeeec
Q 023334 138 QGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTS 176 (283)
Q Consensus 138 ~G~rrIa~lGsRhvp~~hq~LIEllsyALvl~gNhi~TS 176 (283)
-..++|||+|.-+|+- -|+..|+..||.++-.
T Consensus 17 ~~~~kIgiIG~G~mG~-------alA~~L~~~G~~V~~~ 48 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGR-------TMAGALADLGHEVTIG 48 (245)
T ss_dssp --CCEEEEECCSHHHH-------HHHHHHHHTTCEEEEE
T ss_pred cCCCeEEEECCCHHHH-------HHHHHHHHCCCEEEEE
Confidence 3468999999988874 3566677778877643
No 142
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=23.25 E-value=64 Score=26.70 Aligned_cols=33 Identities=12% Similarity=0.198 Sum_probs=24.1
Q ss_pred cchhHHHHHHHHHHHHHhhCCeeeecCCCCchH
Q 023334 151 MGFMHQELIEILSYALVITKNHIYTSGASGTNA 183 (283)
Q Consensus 151 vp~~hq~LIEllsyALvl~gNhi~TSGA~GTNA 183 (283)
+|=-...|.+.+..|+...-.-|+|||++|...
T Consensus 71 v~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~ 103 (185)
T 3rfq_A 71 VEADEVDIRNALNTAVIGGVDLVVSVGGTGVTP 103 (185)
T ss_dssp ECSCHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred eCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 333456777888877755567899999999754
No 143
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=23.18 E-value=40 Score=28.47 Aligned_cols=39 Identities=23% Similarity=0.177 Sum_probs=24.0
Q ss_pred hHHHHHHHHHHHHH--hhCCeeeecCCCCchHHHHHhhhhh
Q 023334 154 MHQELIEILSYALV--ITKNHIYTSGASGTNAAVIRGALRA 192 (283)
Q Consensus 154 ~hq~LIEllsyALv--l~gNhi~TSGA~GTNAAvIRGaLrA 192 (283)
.+.+|.|.++.-+- ...+-++|+|++..|.++|+.+...
T Consensus 87 ~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~~ 127 (439)
T 3dxv_A 87 PAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVKA 127 (439)
T ss_dssp HHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHHH
Confidence 45566665554431 1146677888887777888766543
No 144
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=22.99 E-value=42 Score=27.21 Aligned_cols=18 Identities=0% Similarity=0.025 Sum_probs=9.4
Q ss_pred CCCCCCCChHHHHhhhhH
Q 023334 226 KPHNDHLPLIEASRLCNM 243 (283)
Q Consensus 226 ~PeND~LpL~eAS~lCN~ 243 (283)
+|...-.++.+-..+|.+
T Consensus 133 n~~G~~~~~~~i~~~~~~ 150 (374)
T 3uwc_A 133 HYTGNIADMPALAKIAKK 150 (374)
T ss_dssp CGGGCCCCHHHHHHHHHH
T ss_pred CCcCCcCCHHHHHHHHHH
Confidence 344444555555555554
No 145
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=22.94 E-value=50 Score=27.07 Aligned_cols=20 Identities=20% Similarity=0.137 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHhhCCeeee
Q 023334 156 QELIEILSYALVITKNHIYT 175 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~T 175 (283)
++.++++..++...|.+|++
T Consensus 101 ~~a~~~~~~~~~~~gd~vl~ 120 (386)
T 1u08_A 101 TEALYAAITALVRNGDEVIC 120 (386)
T ss_dssp HHHHHHHHHHHCCTTCEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEE
Confidence 44555555555444544444
No 146
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=22.92 E-value=53 Score=27.78 Aligned_cols=24 Identities=13% Similarity=0.105 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHhhCC----eeeecCC
Q 023334 155 HQELIEILSYALVITKN----HIYTSGA 178 (283)
Q Consensus 155 hq~LIEllsyALvl~gN----hi~TSGA 178 (283)
-++.+.++..++...|. +|++..-
T Consensus 100 ~~~al~~~~~~l~~~Gd~~~~~Vlv~~P 127 (391)
T 3bwn_A 100 STQLCQAAVHALSSLARSQPVSVVAAAP 127 (391)
T ss_dssp HHHHHHHHHHHHHHTSSSSSEEEEECSS
T ss_pred hHHHHHHHHHHhcCCCCCCcceEEEcCC
Confidence 36777888888877777 7776654
No 147
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=22.92 E-value=34 Score=29.38 Aligned_cols=18 Identities=22% Similarity=0.222 Sum_probs=8.1
Q ss_pred eeeecCCCCchHHHHHhh
Q 023334 172 HIYTSGASGTNAAVIRGA 189 (283)
Q Consensus 172 hi~TSGA~GTNAAvIRGa 189 (283)
-++|+|++..+.++++..
T Consensus 121 v~~t~G~~~al~~~~~~l 138 (447)
T 3b46_A 121 VTVTTGANEGILSCLMGL 138 (447)
T ss_dssp EEEESHHHHHHHHHHHHH
T ss_pred EEEeCCHHHHHHHHHHHH
Confidence 344444444444444444
No 148
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=22.74 E-value=35 Score=28.65 Aligned_cols=22 Identities=9% Similarity=0.113 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHhhCCeeeecC
Q 023334 156 QELIEILSYALVITKNHIYTSG 177 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~TSG 177 (283)
++.++++..++...|.+|++.-
T Consensus 123 ~~al~~~~~~l~~~gd~Vl~~~ 144 (430)
T 2x5f_A 123 THGLSLVGDLFVNQDDTILLPE 144 (430)
T ss_dssp HHHHHHHHHHHCCTTCEEEEES
T ss_pred hHHHHHHHHHHhCCCCEEEEcC
Confidence 6778888888877787777663
No 149
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=22.61 E-value=42 Score=27.69 Aligned_cols=21 Identities=19% Similarity=0.240 Sum_probs=14.8
Q ss_pred HhcCCCC---CCCChHHHHhhhhH
Q 023334 223 VIEKPHN---DHLPLIEASRLCNM 243 (283)
Q Consensus 223 lVE~PeN---D~LpL~eAS~lCN~ 243 (283)
+++.|.| .-+|+.+-..+|.+
T Consensus 183 ~~~~~~nptG~~~~l~~i~~l~~~ 206 (401)
T 2bwn_A 183 AFESVYSMDGDFGPIKEICDIAEE 206 (401)
T ss_dssp EEESBCTTTCCBCCHHHHHHHHHH
T ss_pred EEecCcCCCCCcCCHHHHHHHHHH
Confidence 4566665 45788888888875
No 150
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=22.41 E-value=28 Score=32.05 Aligned_cols=10 Identities=30% Similarity=0.630 Sum_probs=8.7
Q ss_pred eeeecCCCCc
Q 023334 172 HIYTSGASGT 181 (283)
Q Consensus 172 hi~TSGA~GT 181 (283)
-|||||+||.
T Consensus 169 iiyTSGSTG~ 178 (620)
T 4dg8_A 169 INFSSGTTGR 178 (620)
T ss_dssp EEEEBSSSSS
T ss_pred EEECCCcccc
Confidence 4799999996
No 151
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=22.39 E-value=29 Score=30.62 Aligned_cols=10 Identities=50% Similarity=0.966 Sum_probs=8.8
Q ss_pred eeeecCCCCc
Q 023334 172 HIYTSGASGT 181 (283)
Q Consensus 172 hi~TSGA~GT 181 (283)
-+||||.||.
T Consensus 160 i~~TSGTTG~ 169 (505)
T 3nyq_A 160 VVYTSGTTGP 169 (505)
T ss_dssp EEEECCSSSS
T ss_pred EEeCCCCcCC
Confidence 5899999995
No 152
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=22.36 E-value=27 Score=31.68 Aligned_cols=10 Identities=30% Similarity=0.591 Sum_probs=8.6
Q ss_pred eeeecCCCCc
Q 023334 172 HIYTSGASGT 181 (283)
Q Consensus 172 hi~TSGA~GT 181 (283)
-+||||+||.
T Consensus 189 ii~TSGSTG~ 198 (617)
T 3rg2_A 189 FQLSGGTTGT 198 (617)
T ss_dssp EEECCCSSSS
T ss_pred EEECCCcCCC
Confidence 4789999995
No 153
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=22.34 E-value=3.6e+02 Score=22.94 Aligned_cols=92 Identities=15% Similarity=0.137 Sum_probs=53.7
Q ss_pred eeecccccCCChh--HHHHHHH-HHhcCCceEEEecc--cccchhHHHHHHHHHHHHHhhCCeeeecCCCCchHHH--HH
Q 023334 115 VMVSEFKPVPDVD--YLQELLA-IQQQGPRAIGFFGT--RNMGFMHQELIEILSYALVITKNHIYTSGASGTNAAV--IR 187 (283)
Q Consensus 115 v~~~~~~~~p~vD--~lqELaa-IQq~G~rrIa~lGs--Rhvp~~hq~LIEllsyALvl~gNhi~TSGA~GTNAAv--IR 187 (283)
....++..=-++| -++++.. +-+.|-.-|.++|| .-.-+.+.+-.+++..+.-..+.-|+-.|+..|.-++ .|
T Consensus 6 a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~gviaGvg~~~t~~ai~la~ 85 (293)
T 1w3i_A 6 PIITPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNKIIFQVGGLNLDDAIRLAK 85 (293)
T ss_dssp ECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHHH
T ss_pred EeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHH
Confidence 3344554322355 4555555 34689999999998 4455667777777777765544444445555555443 33
Q ss_pred hhhhhcCCCceeEeeccccc
Q 023334 188 GALRAERPDLLTVILPQSLK 207 (283)
Q Consensus 188 GaLrAe~P~lLTViLPQSL~ 207 (283)
-|-++ ..+-+-|+-|--.+
T Consensus 86 ~A~~~-Gadavlv~~P~y~~ 104 (293)
T 1w3i_A 86 LSKDF-DIVGIASYAPYYYP 104 (293)
T ss_dssp HGGGS-CCSEEEEECCCSCS
T ss_pred HHHhc-CCCEEEEcCCCCCC
Confidence 34333 56777777664433
No 154
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=22.24 E-value=63 Score=25.52 Aligned_cols=51 Identities=14% Similarity=0.216 Sum_probs=30.3
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHH-hhCCeeeecCCCCchH
Q 023334 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALV-ITKNHIYTSGASGTNA 183 (283)
Q Consensus 128 ~lqELaaIQq~G~rrIa~lGsRhvp~~hq~LIEllsyALv-l~gNhi~TSGA~GTNA 183 (283)
++.++ +++.|-.-+. ...+|=-...|.|.+..|+. ..-.-|+|||++|...
T Consensus 35 ~l~~~--L~~~G~~v~~---~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~ 86 (169)
T 1y5e_A 35 LLHEL--LKEAGHKVTS---YEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGITK 86 (169)
T ss_dssp HHHHH--HHHHTCEEEE---EEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSST
T ss_pred HHHHH--HHHCCCeEeE---EEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCCC
Confidence 55544 3445654221 12233334667777777765 2457999999999764
No 155
>3ot9_A Phosphopentomutase; alkaline phosphatase like core domain, R phosphate, ribose-1-phosphate, glucose-1,6-bisphosphate, PH transfer, isomerase; HET: TPO G16; 1.75A {Bacillus cereus} PDB: 3m8y_A* 3m8w_A* 3m8z_A* 3twz_A* 3tx0_A 3uo0_A* 3un2_A 3un3_A* 3un5_A 3uny_A
Probab=22.24 E-value=2.8e+02 Score=25.91 Aligned_cols=109 Identities=28% Similarity=0.479 Sum_probs=71.5
Q ss_pred ceeeecccccCCC---hhHHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHhhCCee-eecCCCCchHHHHHh
Q 023334 113 GAVMVSEFKPVPD---VDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHI-YTSGASGTNAAVIRG 188 (283)
Q Consensus 113 ~~v~~~~~~~~p~---vD~lqELaaIQq~G~rrIa~lGsRhvp~~hq~LIEllsyALvl~gNhi-~TSGA~GTNAAvIRG 188 (283)
|.....++.-.|+ -++++|+.+ ..|.+ +||-+|.+-+ ++||=+----..+|.-| |||+-+
T Consensus 99 G~~~~~p~~~~~~~fp~~l~~~~~~--~~g~~---~l~n~~~sgt--~ii~~~g~~~~~tg~~ivytsads--------- 162 (399)
T 3ot9_A 99 GLYIDTPFQVFPEGFPKELLDELEE--KTGRK---IIGNKPASGT--EILDELGQEQMETGSLIVYTSADS--------- 162 (399)
T ss_dssp TCCCCSCCCCCTTCCCHHHHHHHHH--HHTCC---EEEEEECCHH--HHHHHHHHHHHHHCCEEEEECSSS---------
T ss_pred CCCcCCCCCcCCccccHHHHHHHHH--HhCCe---EEecccCCcc--cHHHhhCHHHHhhCCceEEEcCCc---------
Confidence 3444555555555 247777643 45644 7788876655 47766666556677666 999764
Q ss_pred hhhhcCCCceeEeecccccCCChhHHHHHHHHhhHhcCCCCCCCChHHHHhhhh--HHHHh----hhceeeEEEe-----
Q 023334 189 ALRAERPDLLTVILPQSLKKQPPESQELLAKVKTVIEKPHNDHLPLIEASRLCN--MDIIS----HVQQVICFAF----- 257 (283)
Q Consensus 189 aLrAe~P~lLTViLPQSL~kQp~ESqelLe~V~hlVE~PeND~LpL~eAS~lCN--~eIIs----rcqQlICFAF----- 257 (283)
|.++- -+-|.+||.|--++|- ++|+. ++-.||++-|
T Consensus 163 -------------------------------v~qia--ahe~~~~~e~ly~~c~~ar~~~~~~~~~vgRVIarpf~G~~~ 209 (399)
T 3ot9_A 163 -------------------------------VLQIA--AHEEVVPLDELYKICKIARELTLDEKYMVGRVIARPFVGEPG 209 (399)
T ss_dssp -------------------------------EEEEE--EETTTSCHHHHHHHHHHHHHHTCSTTSCCSEEEEEEEEEETT
T ss_pred -------------------------------eeEEE--ecccccCHHHHHHHHHHHHHHhccCccceeeEEeccccCCCC
Confidence 33332 2457899999999995 56654 3778999877
Q ss_pred --------eC------chHHHHHHHHH
Q 023334 258 --------HD------SRLLMETCQEA 270 (283)
Q Consensus 258 --------HD------S~tLLetC~eA 270 (283)
|| ..|+++..++|
T Consensus 210 ~f~rt~~r~d~~~~p~~pTvld~L~~a 236 (399)
T 3ot9_A 210 NFTRTPNRHDYALKPFGRTVMNELKDS 236 (399)
T ss_dssp EEEECTTCEEEECCCSSCCHHHHHHHT
T ss_pred CcccCccccccCCCCCCCCHHHHHHHc
Confidence 44 37888877654
No 156
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=22.14 E-value=44 Score=27.71 Aligned_cols=36 Identities=33% Similarity=0.546 Sum_probs=21.1
Q ss_pred cCCChhHHHHH-HHHHhcCCceEEEecccc---cchhHHH
Q 023334 122 PVPDVDYLQEL-LAIQQQGPRAIGFFGTRN---MGFMHQE 157 (283)
Q Consensus 122 ~~p~vD~lqEL-aaIQq~G~rrIa~lGsRh---vp~~hq~ 157 (283)
++|=+....+. .++...|.||||+|||+- -++....
T Consensus 99 ~iPvi~i~~~~~~~a~~~~~~rVgvLaT~~T~~s~~y~~~ 138 (231)
T 3ojc_A 99 GLPLLHIADATAVQIKQQGIDKIGLLGTRYTMEQGFYRGR 138 (231)
T ss_dssp CSCBCCHHHHHHHHHHHTTCCEEEEESCHHHHHSTTTHHH
T ss_pred CCCEeccHHHHHHHHHHcCCCEEEEEcCHHHhhchHHHHH
Confidence 45544433322 234457899999999874 4555443
No 157
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=22.01 E-value=37 Score=28.27 Aligned_cols=21 Identities=19% Similarity=0.257 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHhhCCeeeec
Q 023334 156 QELIEILSYALVITKNHIYTS 176 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~TS 176 (283)
++.++++..++...|.+|+++
T Consensus 111 ~~al~~~~~~l~~~gd~Vl~~ 131 (406)
T 1xi9_A 111 TEALQLIFGALLDPGDEILVP 131 (406)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEc
Confidence 445555555554445555443
No 158
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=21.84 E-value=28 Score=30.67 Aligned_cols=10 Identities=40% Similarity=0.471 Sum_probs=8.6
Q ss_pred eeeecCCCCc
Q 023334 172 HIYTSGASGT 181 (283)
Q Consensus 172 hi~TSGA~GT 181 (283)
-+||||.||.
T Consensus 172 i~~TSGTTG~ 181 (590)
T 3kxw_A 172 LQYTSGSTMH 181 (590)
T ss_dssp EEECSSCSSS
T ss_pred EEeCcCCCCC
Confidence 4799999994
No 159
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=21.83 E-value=2.5e+02 Score=21.59 Aligned_cols=33 Identities=6% Similarity=-0.242 Sum_probs=17.3
Q ss_pred HhcCCceEEEecccccchhHHHHHHHHHHHHHhh
Q 023334 136 QQQGPRAIGFFGTRNMGFMHQELIEILSYALVIT 169 (283)
Q Consensus 136 Qq~G~rrIa~lGsRhvp~~hq~LIEllsyALvl~ 169 (283)
-+.|.|+||+++...- ..++.-.+=...+|...
T Consensus 133 ~~~G~~~i~~i~~~~~-~~~~~R~~gf~~~l~~~ 165 (298)
T 3tb6_A 133 LSLGHTHMMGIFKADD-TQGVKRMNGFIQAHRER 165 (298)
T ss_dssp HHTTCCSEEEEEESSS-HHHHHHHHHHHHHHHHT
T ss_pred HHCCCCcEEEEcCCCC-ccHHHHHHHHHHHHHHc
Confidence 3457788887765443 33334344444444433
No 160
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=21.72 E-value=2.2e+02 Score=25.06 Aligned_cols=69 Identities=22% Similarity=0.269 Sum_probs=41.9
Q ss_pred CceEEEecccccchhHHHHHHHHHHHHHhhCCeeeecCCCC---------------chHHHHHhhhhhcCCCceeEeecc
Q 023334 140 PRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASG---------------TNAAVIRGALRAERPDLLTVILPQ 204 (283)
Q Consensus 140 ~rrIa~lGsRhvp~~hq~LIEllsyALvl~gNhi~TSGA~G---------------TNAAvIRGaLrAe~P~lLTViLPQ 204 (283)
.++|||+|.-+||- -|+.+|...|+.|+-..-+- .+..+++.| +++.|++-+-+|
T Consensus 8 ~~kIgIIG~G~mG~-------slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a--~~~aDlVilavP- 77 (341)
T 3ktd_A 8 SRPVCILGLGLIGG-------SLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRA--AAEDALIVLAVP- 77 (341)
T ss_dssp SSCEEEECCSHHHH-------HHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHH--HHTTCEEEECSC-
T ss_pred CCEEEEEeecHHHH-------HHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhc--ccCCCEEEEeCC-
Confidence 46899999887774 35666777788776544321 112233333 235788887788
Q ss_pred cccCCChhHHHHHHHHhhH
Q 023334 205 SLKKQPPESQELLAKVKTV 223 (283)
Q Consensus 205 SL~kQp~ESqelLe~V~hl 223 (283)
+....+.++++..+
T Consensus 78 -----~~~~~~vl~~l~~~ 91 (341)
T 3ktd_A 78 -----MTAIDSLLDAVHTH 91 (341)
T ss_dssp -----HHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHcc
Confidence 23556677766654
No 161
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=21.64 E-value=67 Score=26.31 Aligned_cols=11 Identities=18% Similarity=0.253 Sum_probs=5.4
Q ss_pred CChHHHHhhhh
Q 023334 232 LPLIEASRLCN 242 (283)
Q Consensus 232 LpL~eAS~lCN 242 (283)
.|+.+-..+|.
T Consensus 182 ~~l~~i~~l~~ 192 (406)
T 3cai_A 182 TDLRAMTKLVH 192 (406)
T ss_dssp CCCHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 44554445554
No 162
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=21.49 E-value=1.7e+02 Score=24.49 Aligned_cols=38 Identities=13% Similarity=0.119 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHhhCCeeeecCCCCchHHHHHhhhhh
Q 023334 155 HQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRA 192 (283)
Q Consensus 155 hq~LIEllsyALvl~gNhi~TSGA~GTNAAvIRGaLrA 192 (283)
+.+|.|.++..+--..+-++|+|++-.|.++||.+...
T Consensus 97 ~~~l~~~la~~~~~~~~v~~~~sGsea~~~ai~~a~~~ 134 (434)
T 3l44_A 97 EVKFAKMLKEAMPALDKVRFVNSGTEAVMTTIRVARAY 134 (434)
T ss_dssp HHHHHHHHHHHCTTCSEEEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHHh
Confidence 34444444433222356778888888888888866553
No 163
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=21.45 E-value=49 Score=26.66 Aligned_cols=19 Identities=16% Similarity=0.123 Sum_probs=10.9
Q ss_pred CeeeecCCCCchHHHHHhh
Q 023334 171 NHIYTSGASGTNAAVIRGA 189 (283)
Q Consensus 171 Nhi~TSGA~GTNAAvIRGa 189 (283)
+-++|+|++..+.++++++
T Consensus 78 ~v~~~~g~t~a~~~~~~~~ 96 (390)
T 1elu_A 78 TITITDNVTTGCDIVLWGL 96 (390)
T ss_dssp GEEEESSHHHHHHHHHHHS
T ss_pred HEEEeCChHHHHHHHHhCC
Confidence 3455666666555555555
No 164
>2e7z_A Acetylene hydratase AHY; tungstoprotein, DMSO reductase family, iron-sulfur-cluster, lyase; HET: MGD; 1.26A {Pelobacter acetylenicus}
Probab=21.34 E-value=1.3e+02 Score=28.26 Aligned_cols=51 Identities=16% Similarity=0.234 Sum_probs=32.7
Q ss_pred cccCCC---hh-HHHHHHHHHh-cCCceEEEecc-ccc-c--hhHHHHHHHHHHHHHhhCCeeeec
Q 023334 120 FKPVPD---VD-YLQELLAIQQ-QGPRAIGFFGT-RNM-G--FMHQELIEILSYALVITKNHIYTS 176 (283)
Q Consensus 120 ~~~~p~---vD-~lqELaaIQq-~G~rrIa~lGs-Rhv-p--~~hq~LIEllsyALvl~gNhi~TS 176 (283)
++++.= +| ++++|..|++ .|+..|+++++ ++. . ++++.+.. + +..+++.+.
T Consensus 75 ~~~isWdeAl~~ia~~l~~i~~~~G~~~i~~~~~~~~~~~~~~~~~~~~~----~--~G~~n~~~~ 134 (727)
T 2e7z_A 75 WERISWDQALDEIAEKLKKIIAKYGPESLGVSQTEINQQSEYGTLRRFMN----L--LGSPNWTSA 134 (727)
T ss_dssp EEECCHHHHHHHHHHHHHHHHHHHCGGGEEEEECGGGTCCCTTHHHHHHH----H--HTCCCEECG
T ss_pred eEEecHHHHHHHHHHHHHHHHHhhCCcEEEEEeCCCCCccchHHHHHHHH----H--cCCCCccCC
Confidence 455442 56 6688888876 49999999965 333 4 66655543 2 455666663
No 165
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=21.28 E-value=57 Score=27.60 Aligned_cols=44 Identities=11% Similarity=-0.055 Sum_probs=23.0
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHh----hCCe---eeecCCC
Q 023334 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVI----TKNH---IYTSGAS 179 (283)
Q Consensus 128 ~lqELaaIQq~G~rrIa~lGsRhvp~~hq~LIEllsyALvl----~gNh---i~TSGA~ 179 (283)
+.+.|+..- |.+.|.|..+ -.+-+++.-.++.. .|.+ ++++...
T Consensus 81 l~~~la~~~--~~~~v~~t~g------gt~A~~~al~~~~~~~~~~Gd~~~~viv~~~~ 131 (467)
T 1ax4_A 81 LKDKAKELF--NYDYIIPAHQ------GRGAENILFPVLLKYKQKEGKAKNPVFISNFH 131 (467)
T ss_dssp HHHHHHHHH--CCCEEEEESS------HHHHHHHHHHHHHHHHHHTTCCSSCEEEESSC
T ss_pred HHHHHHHHc--CCCcEEEcCC------cHHHHHHHHHHHHHhhccCCCccceEEEeccc
Confidence 445555543 3345544432 13455666666665 6776 6666333
No 166
>3dvo_A Sgrair restriction enzyme; restriction enzyme/DNA complex; HET: DNA; 1.89A {Streptomyces griseus} PDB: 3dpg_A* 3dw9_A* 3mq6_A* 3mqy_A* 3n78_A* 3n7b_A*
Probab=21.22 E-value=1.8e+02 Score=27.24 Aligned_cols=69 Identities=26% Similarity=0.386 Sum_probs=51.5
Q ss_pred CceEEEec-ccccchh------HHHHHHHHHHHHHhhCCeeeecCCCCchHHHHHhhhhhcCCCceeEeecccccC----
Q 023334 140 PRAIGFFG-TRNMGFM------HQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKK---- 208 (283)
Q Consensus 140 ~rrIa~lG-sRhvp~~------hq~LIEllsyALvl~gNhi~TSGA~GTNAAvIRGaLrAe~P~lLTViLPQSL~k---- 208 (283)
-|+||++- -|-.-+. -+..||-+.-+|-..|=.|+|| .||++-|.+|.-|..
T Consensus 141 ~r~vAvl~LPr~fD~~kLf~~e~re~i~~le~~L~k~Gv~LitS-----------------nPDlviVr~pd~l~n~~~~ 203 (338)
T 3dvo_A 141 RRQVAVLNLPRSFDWVSLLVPESQEVIEEFRAGLRKDGLGLPTS-----------------TPDLAVVVLPEEFQNDEMW 203 (338)
T ss_dssp GGCEEEEECCTTCCGGGGBCHHHHHHHHHHHHHHHHTTCBCCCC-----------------CCSEEEEECCGGGTTCGGG
T ss_pred cceeEEEECCCccchhhhhhHHHHHHHHHHHHHHHhhceecccC-----------------CCCEEEEeCCccccChhhh
Confidence 36788882 2222222 4788899999999999999999 899999999866655
Q ss_pred ------CChhHHHHHHHHhhHhc
Q 023334 209 ------QPPESQELLAKVKTVIE 225 (283)
Q Consensus 209 ------Qp~ESqelLe~V~hlVE 225 (283)
-.+|++..|+..-+.+|
T Consensus 204 ~ePI~kLt~eN~~~L~t~yq~le 226 (338)
T 3dvo_A 204 REEIAGLTRPNQILLSGAYQRLQ 226 (338)
T ss_dssp GCCCSSCCHHHHHHHHHTHHHHT
T ss_pred cccccccCchhHHHHHHHHHHHh
Confidence 45677777777766665
No 167
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=21.16 E-value=36 Score=28.69 Aligned_cols=21 Identities=5% Similarity=0.134 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHhhCCeeeec
Q 023334 156 QELIEILSYALVITKNHIYTS 176 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~TS 176 (283)
++.++++..++...|.+|++.
T Consensus 119 ~~al~~~~~~l~~~gd~Vl~~ 139 (425)
T 1vp4_A 119 QQALDLIGKLFLDDESYCVLD 139 (425)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEe
Confidence 455666666665555555543
No 168
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=21.15 E-value=16 Score=32.13 Aligned_cols=22 Identities=14% Similarity=0.022 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHhhCCeeeecC
Q 023334 156 QELIEILSYALVITKNHIYTSG 177 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~TSG 177 (283)
.+.++++-.+++..|..|+++-
T Consensus 82 t~a~~~~~~a~~~~gd~Vlv~~ 103 (446)
T 2x3l_A 82 TSGILSVIQSFSQKKGDILMAR 103 (446)
T ss_dssp HHHHHHHHHTTTTSSSCEEECT
T ss_pred HHHHHHHHHHhcCCCCEEEEec
Confidence 5667777777777777777654
No 169
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=21.11 E-value=41 Score=28.02 Aligned_cols=20 Identities=20% Similarity=0.180 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHhhCCeeee
Q 023334 156 QELIEILSYALVITKNHIYT 175 (283)
Q Consensus 156 q~LIEllsyALvl~gNhi~T 175 (283)
.+.++++..++...|..|++
T Consensus 96 ~~al~~~~~~~~~~gd~Vl~ 115 (411)
T 2o0r_A 96 TEAIAAAVLGLVEPGSEVLL 115 (411)
T ss_dssp HHHHHHHHHHHCCTTCEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEE
Confidence 34455555555444444443
No 170
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=21.01 E-value=29 Score=30.05 Aligned_cols=10 Identities=40% Similarity=0.850 Sum_probs=8.6
Q ss_pred eeeecCCCCc
Q 023334 172 HIYTSGASGT 181 (283)
Q Consensus 172 hi~TSGA~GT 181 (283)
-+||||.||.
T Consensus 168 i~~TSGTTG~ 177 (501)
T 3ipl_A 168 IMFTSGTTGP 177 (501)
T ss_dssp EEECCTTTSC
T ss_pred EEECCCCCCC
Confidence 4899999995
No 171
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=20.93 E-value=67 Score=25.09 Aligned_cols=51 Identities=20% Similarity=0.414 Sum_probs=29.4
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHhhC-CeeeecCCCCchH
Q 023334 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITK-NHIYTSGASGTNA 183 (283)
Q Consensus 128 ~lqELaaIQq~G~rrIa~lGsRhvp~~hq~LIEllsyALvl~g-Nhi~TSGA~GTNA 183 (283)
++.++ +.+.|-..+.. ..+|=--..|.+.+..+++..+ .-|+|||++|...
T Consensus 44 ~L~~~--L~~~G~~v~~~---~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~~ 95 (178)
T 3iwt_A 44 IIKQL--LIENGHKIIGY---SLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYSP 95 (178)
T ss_dssp HHHHH--HHHTTCEEEEE---EEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSST
T ss_pred HHHHH--HHHCCCEEEEE---EEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccCC
Confidence 55544 34566543211 2223233566666777666544 6899999999653
No 172
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=20.91 E-value=99 Score=27.41 Aligned_cols=40 Identities=10% Similarity=0.042 Sum_probs=26.6
Q ss_pred cchhHHHHHHHHHHHH---HhhCCeeeecCCCCchHHHHHhhh
Q 023334 151 MGFMHQELIEILSYAL---VITKNHIYTSGASGTNAAVIRGAL 190 (283)
Q Consensus 151 vp~~hq~LIEllsyAL---vl~gNhi~TSGA~GTNAAvIRGaL 190 (283)
.+-+++.+.+.+..-. +-..+-++|+|+++.+.++++..+
T Consensus 136 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~ 178 (500)
T 3tcm_A 136 IHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLI 178 (500)
T ss_dssp CHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHc
Confidence 4455666666554221 234677889999888888888765
No 173
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=20.78 E-value=46 Score=27.40 Aligned_cols=44 Identities=16% Similarity=0.100 Sum_probs=27.4
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHhhC-CeeeecC
Q 023334 128 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITK-NHIYTSG 177 (283)
Q Consensus 128 ~lqELaaIQq~G~rrIa~lGsRhvp~~hq~LIEllsyALvl~g-Nhi~TSG 177 (283)
+-+.++..-.-.+..|.+..+ -++.++++..++...| .+|++..
T Consensus 63 lr~~la~~~~~~~~~v~~~~G------~~~ai~~~~~~~~~~g~d~Vl~~~ 107 (356)
T 1fg7_A 63 VIENYAQYAGVKPEQVLVSRG------ADEGIELLIRAFCEPGKDAILYCP 107 (356)
T ss_dssp HHHHHHHHHTSCGGGEEEESH------HHHHHHHHHHHHCCTTTCEEEECS
T ss_pred HHHHHHHHhCCChHHEEEcCC------HHHHHHHHHHHHhCCCCCEEEEeC
Confidence 666666665444445544321 3678888888887677 6776653
No 174
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=20.72 E-value=33 Score=30.45 Aligned_cols=10 Identities=40% Similarity=0.790 Sum_probs=8.6
Q ss_pred eeeecCCCCc
Q 023334 172 HIYTSGASGT 181 (283)
Q Consensus 172 hi~TSGA~GT 181 (283)
-+||||.||.
T Consensus 181 i~~TSGTTG~ 190 (541)
T 1v25_A 181 MAYTTGTTGL 190 (541)
T ss_dssp EEEECSSSSS
T ss_pred EEECCCCCCC
Confidence 4799999995
No 175
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=20.69 E-value=51 Score=27.46 Aligned_cols=36 Identities=25% Similarity=0.326 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHh-hCCeeeecCCCCchHHHHHhhhh
Q 023334 156 QELIEILSYALVI-TKNHIYTSGASGTNAAVIRGALR 191 (283)
Q Consensus 156 q~LIEllsyALvl-~gNhi~TSGA~GTNAAvIRGaLr 191 (283)
..+.|.++.-+-. ..+-++|+|++..+.++++++.+
T Consensus 64 ~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~ 100 (432)
T 3a9z_A 64 NTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVR 100 (432)
T ss_dssp HHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCeEEEeCChHHHHHHHHHHHHh
Confidence 5666666665533 25789999999999999999874
No 176
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=20.66 E-value=2.4e+02 Score=20.27 Aligned_cols=64 Identities=14% Similarity=0.191 Sum_probs=35.4
Q ss_pred CceEEEeccccc---chh-HHHHHHHHHHHHHhh--CCeeeecCCCCchHHH----HHhhhhhcCCCceeEeec
Q 023334 140 PRAIGFFGTRNM---GFM-HQELIEILSYALVIT--KNHIYTSGASGTNAAV----IRGALRAERPDLLTVILP 203 (283)
Q Consensus 140 ~rrIa~lGsRhv---p~~-hq~LIEllsyALvl~--gNhi~TSGA~GTNAAv----IRGaLrAe~P~lLTViLP 203 (283)
.++|.++|--.. +.. ..-...+++..|... +-.++..|-+|.++.- +.-.+...+|+++.|.+-
T Consensus 2 ~~~i~~~GDSit~G~g~~~~~~~~~~l~~~l~~~~~~~~v~n~g~~G~~~~~~~~~~~~~~~~~~pd~vvi~~G 75 (185)
T 3hp4_A 2 DNTILILGDXLSAAYGLQQEEGWVKLLQDKYDAEQSDIVLINASISGETSGGALRRLDALLEQYEPTHVLIELG 75 (185)
T ss_dssp CEEEEEEECTTTTTTTSCGGGSHHHHHHHHHHHTTCCEEEEECCCTTCCHHHHHHHHHHHHHHHCCSEEEEECC
T ss_pred CCeEEEECCcccccCCCCCcccHHHHHHHHHHhcCCcEEEEECCcCCccHHHHHHHHHHHHhhcCCCEEEEEee
Confidence 467888885432 111 122334455555443 3456667777776643 333444459999888753
No 177
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=20.66 E-value=21 Score=29.08 Aligned_cols=52 Identities=10% Similarity=0.136 Sum_probs=29.7
Q ss_pred ccccCCChh-HHHHHHHHH-hcCCceEEEecccccchhHHHHHHHHHHHHHhhCCeeeec
Q 023334 119 EFKPVPDVD-YLQELLAIQ-QQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTS 176 (283)
Q Consensus 119 ~~~~~p~vD-~lqELaaIQ-q~G~rrIa~lGsRhvp~~hq~LIEllsyALvl~gNhi~TS 176 (283)
.|.+.+... +-++++..- ..++..|.+..+ -.+.++++..++...|.+|++.
T Consensus 58 ~y~~~~g~~~l~~~la~~~~~~~~~~v~~~~g------~~~a~~~~~~~l~~~gd~Vl~~ 111 (375)
T 3op7_A 58 NYGWIEGSPAFKKSVSQLYTGVKPEQILQTNG------ATGANLLVLYSLIEPGDHVISL 111 (375)
T ss_dssp SSCCTTCCHHHHHHHHTTSSSCCGGGEEEESH------HHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCCCCChHHHHHHHHHHhccCChhhEEEcCC------hHHHHHHHHHHhcCCCCEEEEe
Confidence 355544444 556666543 234455544432 3567777778887777777654
No 178
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=20.60 E-value=46 Score=29.21 Aligned_cols=31 Identities=16% Similarity=0.093 Sum_probs=21.7
Q ss_pred HHHHHHHHhh-C-Ceee-ecCCCCchHHHHHhhh
Q 023334 160 EILSYALVIT-K-NHIY-TSGASGTNAAVIRGAL 190 (283)
Q Consensus 160 EllsyALvl~-g-Nhi~-TSGA~GTNAAvIRGaL 190 (283)
|.+++-+-.. . +-++ |||+|..+.++|+|.+
T Consensus 57 ~~la~ll~~~~~~~v~f~t~~~T~a~n~~~~~~~ 90 (361)
T 3m5u_A 57 EKAKKLYELNDDYEVLFLQGGASLQFAMIPMNLA 90 (361)
T ss_dssp HHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHC
T ss_pred HHHHHHhCCCCCceEEEEcCcHHHHHHHHHHhcC
Confidence 3444444332 2 3466 9999999999999998
No 179
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=20.48 E-value=29 Score=30.63 Aligned_cols=10 Identities=50% Similarity=0.926 Sum_probs=5.8
Q ss_pred eeeecCCCCc
Q 023334 172 HIYTSGASGT 181 (283)
Q Consensus 172 hi~TSGA~GT 181 (283)
-+||||+||.
T Consensus 175 i~~TSGTTG~ 184 (517)
T 3r44_A 175 IMYTSGTTGH 184 (517)
T ss_dssp EEEECC---C
T ss_pred EEECCccccc
Confidence 4899999995
No 180
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=20.38 E-value=28 Score=30.31 Aligned_cols=10 Identities=30% Similarity=0.355 Sum_probs=6.8
Q ss_pred eeeecCCCCc
Q 023334 172 HIYTSGASGT 181 (283)
Q Consensus 172 hi~TSGA~GT 181 (283)
-+||||.||.
T Consensus 165 i~~TSGTTG~ 174 (509)
T 3ivr_A 165 IIHTAAVGGR 174 (509)
T ss_dssp EEEEEC--CC
T ss_pred EEeCCCCCCC
Confidence 5899999996
No 181
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=20.37 E-value=28 Score=30.56 Aligned_cols=10 Identities=50% Similarity=0.939 Sum_probs=6.7
Q ss_pred eeeecCCCCc
Q 023334 172 HIYTSGASGT 181 (283)
Q Consensus 172 hi~TSGA~GT 181 (283)
-+||||+||.
T Consensus 160 i~~TSGTTG~ 169 (503)
T 4fuq_A 160 ILYTSGTTGR 169 (503)
T ss_dssp EEECC--CCS
T ss_pred EEECCCcccC
Confidence 4899999995
No 182
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=20.37 E-value=3.7e+02 Score=22.73 Aligned_cols=88 Identities=13% Similarity=0.106 Sum_probs=47.9
Q ss_pred HHhhhhhcCCCceeEeecccccCCChhHHHHHHHHhh-HhcCCCCCCCChHHHHhhhhHHHHhhhceeeEEE----eeCc
Q 023334 186 IRGALRAERPDLLTVILPQSLKKQPPESQELLAKVKT-VIEKPHNDHLPLIEASRLCNMDIISHVQQVICFA----FHDS 260 (283)
Q Consensus 186 IRGaLrAe~P~lLTViLPQSL~kQp~ESqelLe~V~h-lVE~PeND~LpL~eAS~lCN~eIIsrcqQlICFA----FHDS 260 (283)
++-.|..+++|.+-|..|-.+- .+-..+.|+.=+| ++|||-- +.+.||.+|-. ...+..-.+.-+ |+..
T Consensus 75 ~~~ll~~~~iD~V~i~tp~~~h--~~~~~~al~~Gk~V~~EKP~a--~~~~~~~~l~~--~a~~~~~~~~v~~~~r~~p~ 148 (383)
T 3oqb_A 75 LDAALADKNDTMFFDAATTQAR--PGLLTQAINAGKHVYCEKPIA--TNFEEALEVVK--LANSKGVKHGTVQDKLFLPG 148 (383)
T ss_dssp HHHHHHCSSCCEEEECSCSSSS--HHHHHHHHTTTCEEEECSCSC--SSHHHHHHHHH--HHHHTTCCEEECCGGGGSHH
T ss_pred HHHHhcCCCCCEEEECCCchHH--HHHHHHHHHCCCeEEEcCCCC--CCHHHHHHHHH--HHHHcCCeEEEEeccccCHH
Confidence 3445555678888888887443 3445566665555 5799974 57778877643 233333333333 2333
Q ss_pred hHHHHHHHHHHhccCeeEE
Q 023334 261 RLLMETCQEAKNLRKIVTL 279 (283)
Q Consensus 261 ~tLLetC~eAe~~~KiVTL 279 (283)
-.-+...-++.+.++|+.+
T Consensus 149 ~~~~~~~i~~g~iG~i~~~ 167 (383)
T 3oqb_A 149 LKKIAFLRDSGFFGRILSV 167 (383)
T ss_dssp HHHHHHHHHTTTTSSEEEE
T ss_pred HHHHHHHHHcCCCCCcEEE
Confidence 2233333333456676654
No 183
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=20.30 E-value=95 Score=26.18 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=23.0
Q ss_pred hcCCceEEEecccccchhHHHHHHHHHHHHHhhCCeeeec
Q 023334 137 QQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTS 176 (283)
Q Consensus 137 q~G~rrIa~lGsRhvp~~hq~LIEllsyALvl~gNhi~TS 176 (283)
....++|||+|.-+||- -|+..|+..|+.++--
T Consensus 28 ~~~~~~I~iIG~G~mG~-------~~a~~l~~~G~~V~~~ 60 (320)
T 4dll_A 28 DPYARKITFLGTGSMGL-------PMARRLCEAGYALQVW 60 (320)
T ss_dssp -CCCSEEEEECCTTTHH-------HHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEECccHHHH-------HHHHHHHhCCCeEEEE
Confidence 33456999999999984 3555666678877643
No 184
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=20.28 E-value=31 Score=30.48 Aligned_cols=10 Identities=40% Similarity=0.700 Sum_probs=8.4
Q ss_pred eeeecCCCCc
Q 023334 172 HIYTSGASGT 181 (283)
Q Consensus 172 hi~TSGA~GT 181 (283)
-+||||+||.
T Consensus 183 i~~TSGTTG~ 192 (536)
T 3ni2_A 183 LPYSSGTTGL 192 (536)
T ss_dssp CCEECTTSSS
T ss_pred EEcCCCcccc
Confidence 3699999995
No 185
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=20.27 E-value=42 Score=32.50 Aligned_cols=19 Identities=37% Similarity=0.576 Sum_probs=13.9
Q ss_pred eeecCC--CCchHHHHHhhhhh
Q 023334 173 IYTSGA--SGTNAAVIRGALRA 192 (283)
Q Consensus 173 i~TSGA--~GTNAAvIRGaLrA 192 (283)
|+|||+ .|.||| |||+.|+
T Consensus 77 IltsGGdaPGmNa~-Ir~vv~~ 97 (555)
T 2f48_A 77 IILSGGPAPGGHNV-ISGVFDA 97 (555)
T ss_dssp EEEBSSCCTTHHHH-HHHHHHH
T ss_pred EECcCCCcHhHHHH-HHHHHHH
Confidence 469998 688875 4777655
No 186
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=20.05 E-value=77 Score=26.83 Aligned_cols=87 Identities=11% Similarity=0.044 Sum_probs=55.5
Q ss_pred hhHHHHHHHHHhcCCceEEEecccccchhHHHHHHHHH------------------HHHHhhCCeeeecCCCCchHHHHH
Q 023334 126 VDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILS------------------YALVITKNHIYTSGASGTNAAVIR 187 (283)
Q Consensus 126 vD~lqELaaIQq~G~rrIa~lGsRhvp~~hq~LIElls------------------yALvl~gNhi~TSGA~GTNAAvIR 187 (283)
.|+++=|...++.+ ++||++|-.|+..--..+-+++. ..+...|-.++--|+..++.|-=
T Consensus 93 ~Dil~aL~~a~~~~-~kIavVg~~~~~~~~~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~~G~~vVVG~~~~~~~A~~- 170 (225)
T 2pju_A 93 YDVLQFLAKAGKLT-SSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAGLITDLAEE- 170 (225)
T ss_dssp HHHHHHHHHTTCTT-SCEEEEEESSCCHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEESHHHHHHHHH-
T ss_pred HHHHHHHHHHHhhC-CcEEEEeCchhhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHH-
Confidence 58999999998877 58999999998766554444443 34556677777777666666533
Q ss_pred hhhhhcCCCceeEeecccccCCChhHHHHHHHHhhHhcC
Q 023334 188 GALRAERPDLLTVILPQSLKKQPPESQELLAKVKTVIEK 226 (283)
Q Consensus 188 GaLrAe~P~lLTViLPQSL~kQp~ESqelLe~V~hlVE~ 226 (283)
-.+=.|++- | ..-.++-+++-+++.+.
T Consensus 171 -------~Gl~~vlI~-s----~eSI~~Ai~eA~~l~~~ 197 (225)
T 2pju_A 171 -------AGMTGIFIY-S----AATVRQAFSDALDMTRM 197 (225)
T ss_dssp -------TTSEEEESS-C----HHHHHHHHHHHHHHHHH
T ss_pred -------cCCcEEEEC-C----HHHHHHHHHHHHHHHHH
Confidence 334445544 4 13445556665555544
No 187
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=20.04 E-value=75 Score=26.81 Aligned_cols=36 Identities=14% Similarity=-0.009 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHHHHhhCCeeeecCCCCchHHHHHhh
Q 023334 154 MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGA 189 (283)
Q Consensus 154 ~hq~LIEllsyALvl~gNhi~TSGA~GTNAAvIRGa 189 (283)
.+.+|-|.++.-+--..+-++|+|++-.|.++||.|
T Consensus 97 ~~~~l~~~la~~~~~~~~v~~~~sgseA~~~al~~a 132 (434)
T 2epj_A 97 AEVLLAEKILGYVKRGGMIRFVNSGTEATMTAIRLA 132 (434)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHH
Confidence 455666666654312345678888888888888875
Done!