BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023335
(283 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224117478|ref|XP_002317584.1| predicted protein [Populus trichocarpa]
gi|222860649|gb|EEE98196.1| predicted protein [Populus trichocarpa]
Length = 278
Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/286 (74%), Positives = 244/286 (85%), Gaps = 11/286 (3%)
Query: 1 MAKIIHEATENMTQLCRRVVHV-NIRRSLFDRVSIFRRFFRFIWERILVCSIGKQPAVRY 59
MA+++HE MTQLCR VVHV NI+ ++ +RV++F++FF+FIW+RIL CSIGK VRY
Sbjct: 1 MAEVVHE---KMTQLCREVVHVKNIKWNILERVTVFKQFFQFIWDRILACSIGK--PVRY 55
Query: 60 QKLTRRSSSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VK 118
++L R S P P+ MEAG+ L SG++ DSDLV LKISLLGDCQIGKTSF +K
Sbjct: 56 RRLASRPYS---PPPEAMEAGVESLEAASCSGFNPDSDLVRLKISLLGDCQIGKTSFMIK 112
Query: 119 YVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFM 177
YVG+EQE+ L M GLNL++KTL VQGARI+FSIWDV GDSRS DHVPIACKDAVAILFM
Sbjct: 113 YVGDEQEKKCLGMTGLNLMDKTLFVQGARISFSIWDVAGDSRSIDHVPIACKDAVAILFM 172
Query: 178 FDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAM 237
FDLTSRCTLNS++ WYS+ARKWNQTAIPILIGTKFDDFV+LPP+LQWTI TQARAYAKAM
Sbjct: 173 FDLTSRCTLNSVLEWYSQARKWNQTAIPILIGTKFDDFVQLPPNLQWTIVTQARAYAKAM 232
Query: 238 KATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
KATLFFSSA HNINVNKIFKFIMAKL NLPWTV+RNLTIGEPIIDF
Sbjct: 233 KATLFFSSAKHNINVNKIFKFIMAKLLNLPWTVERNLTIGEPIIDF 278
>gi|224126377|ref|XP_002319823.1| predicted protein [Populus trichocarpa]
gi|222858199|gb|EEE95746.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/288 (73%), Positives = 247/288 (85%), Gaps = 14/288 (4%)
Query: 1 MAKIIHEATENMTQLCRRVVHVN-IRRSLFDRVSIFRRFFRFIWERILVCSIGKQPAVRY 59
M+KI+HE MTQLC ++ H N I+ S+ +RV++F++FF FIW++IL CSIGK PA RY
Sbjct: 1 MSKIVHE---KMTQLCVKIAHGNSIKWSILERVTVFKQFFHFIWDKILACSIGK-PA-RY 55
Query: 60 QKLTRRSSSESSPAPDTMEAGLVELSRTFSS--GYDTDSDLVSLKISLLGDCQIGKTSFV 117
++LT RS S P P+ +EAG VE S +S G+ DSDLVSLKISLLGDCQIGKTSFV
Sbjct: 56 RRLTYRSCS---PPPEAIEAG-VETSLEAASCRGFSKDSDLVSLKISLLGDCQIGKTSFV 111
Query: 118 -KYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAIL 175
KYVG+EQE+ L+M GL+L++KTL VQGARI+FSIWDV GDS S DHVPIACKDAVAIL
Sbjct: 112 IKYVGDEQEKKCLEMTGLSLMDKTLFVQGARISFSIWDVAGDSSSLDHVPIACKDAVAIL 171
Query: 176 FMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAK 235
FMFDLTSRCTLN++V WY++ARKWNQTAIPILIGTKFDDFV+LPP+LQWTI TQARAYAK
Sbjct: 172 FMFDLTSRCTLNNVVEWYNQARKWNQTAIPILIGTKFDDFVQLPPNLQWTIVTQARAYAK 231
Query: 236 AMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
AMKATLFFSS+ HNINVNKIFKFIMAKLFNLPWTV+RNLT+GEPIIDF
Sbjct: 232 AMKATLFFSSSKHNINVNKIFKFIMAKLFNLPWTVERNLTVGEPIIDF 279
>gi|356553345|ref|XP_003545017.1| PREDICTED: septum-promoting GTP-binding protein 1-like [Glycine
max]
Length = 282
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/283 (72%), Positives = 236/283 (83%), Gaps = 6/283 (2%)
Query: 3 KIIHEATENMTQLCRRVVHVNIRRSLFDRVSIFRRFFRFIWERILVCSIGKQPAVRYQKL 62
KIIH+ T M+QLC+++V V++R RVS FFRFIW R++VCS+ P+ Y+KL
Sbjct: 4 KIIHDTTRKMSQLCQKIVQVDVRWGFLKRVSFVGHFFRFIWNRLVVCSVAGSPS-HYRKL 62
Query: 63 TRRSSSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVG 121
R S S PA T++ + + T + GYD+DSDLV+LKISLLGDC IGKT+FV KYVG
Sbjct: 63 PLRDPSSSPPA--TVD-DVFSSAATTTGGYDSDSDLVNLKISLLGDCHIGKTTFVIKYVG 119
Query: 122 NEQER-SLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDL 180
NEQE+ SLQM GLNL++KTL VQGARI+F IWDV GD RS D +P+ACKDAVAIL MFDL
Sbjct: 120 NEQEKGSLQMEGLNLMDKTLSVQGARISFRIWDVAGDKRSLDQIPMACKDAVAILIMFDL 179
Query: 181 TSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKAT 240
TSRCTLNS+VGWYSEARKWNQTAIPILIGTKFDDFVRLPPD+QWTIATQARAYA+AMKAT
Sbjct: 180 TSRCTLNSVVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDVQWTIATQARAYARAMKAT 239
Query: 241 LFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
LFFSSATHNINVNKIFKFIMAKLFNLPWTV+RNL +GEPIIDF
Sbjct: 240 LFFSSATHNINVNKIFKFIMAKLFNLPWTVERNLRVGEPIIDF 282
>gi|356501505|ref|XP_003519565.1| PREDICTED: septum-promoting GTP-binding protein 1-like [Glycine
max]
Length = 282
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/285 (71%), Positives = 236/285 (82%), Gaps = 10/285 (3%)
Query: 3 KIIHEATENMTQLCRRVVHVNIRRSLFDRVSIFRRFFRFIWERILVCSIGKQPAVRYQKL 62
KIIH+ T M+QLC+++V V++R + RVS FFRFIW R+LVCS+ +P+ +Y+KL
Sbjct: 4 KIIHDTTRKMSQLCQKIVKVDVRWGVLKRVSFVGHFFRFIWNRLLVCSVAGRPS-QYRKL 62
Query: 63 TRRSSSESSP--APDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KY 119
R S S P A D + + T + GYD+DSDLV+LKISLLGDC IGKT+FV KY
Sbjct: 63 PVRDPSSSPPSYADDVFFS-----ATTTTGGYDSDSDLVNLKISLLGDCHIGKTTFVIKY 117
Query: 120 VGNEQE-RSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMF 178
VGNEQE RSLQM GLNL++KTL VQGARI+F IWDV GD RS D +P+ACKD+VAIL MF
Sbjct: 118 VGNEQEKRSLQMEGLNLMDKTLSVQGARISFRIWDVAGDKRSLDQIPMACKDSVAILIMF 177
Query: 179 DLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMK 238
DLTSRCTLNS+VGWYSEARKWNQTAIPILIGTKFDDFVRLPPD+QWTI TQARAYA+AMK
Sbjct: 178 DLTSRCTLNSVVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDVQWTIVTQARAYARAMK 237
Query: 239 ATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
ATLFFSSATHNINVNKIFKFIMAKLFNLPWTV+RNL +GEPIIDF
Sbjct: 238 ATLFFSSATHNINVNKIFKFIMAKLFNLPWTVERNLRVGEPIIDF 282
>gi|225461736|ref|XP_002285529.1| PREDICTED: septum-promoting GTP-binding protein 1 [Vitis vinifera]
Length = 282
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/279 (73%), Positives = 241/279 (86%), Gaps = 6/279 (2%)
Query: 7 EATENMTQLCRRVVHVNIRRSLFDRVSIFRRFFRFIWERILVCSIGKQPAVRYQKLTRRS 66
EAT MTQLCR++V VNIR + DRV+IF++FFRFIW+RI+VCSIGK +RY +L+RRS
Sbjct: 8 EATGKMTQLCRKIVRVNIRVRILDRVTIFQKFFRFIWDRIIVCSIGK--PIRYHRLSRRS 65
Query: 67 SSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNEQE 125
S +T+E+GL + ++G D+DSDLVSLKI ++GDCQIGKTSF +KYVG+EQE
Sbjct: 66 PPPSPSP-ETIESGLQSDDPSTAAG-DSDSDLVSLKICVMGDCQIGKTSFLIKYVGDEQE 123
Query: 126 RS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRC 184
+ L+M GLNL++KTL+VQ ARIAFSIWDVGGD S HVPIACKDAVAILFMFDLTSRC
Sbjct: 124 KKCLEMTGLNLMDKTLIVQDARIAFSIWDVGGDHTSLTHVPIACKDAVAILFMFDLTSRC 183
Query: 185 TLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFS 244
TLNS++GWYS+AR+WNQTAIPI+IGTKFDDFV+LPPDLQ I TQAR YA+AMKATLFFS
Sbjct: 184 TLNSVIGWYSQARRWNQTAIPIMIGTKFDDFVKLPPDLQRPIVTQARGYARAMKATLFFS 243
Query: 245 SATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
SATHNINVNKIFKFIMAKLFNLPWTV+RNLTIGEPIIDF
Sbjct: 244 SATHNINVNKIFKFIMAKLFNLPWTVQRNLTIGEPIIDF 282
>gi|147838102|emb|CAN60928.1| hypothetical protein VITISV_008356 [Vitis vinifera]
gi|302142871|emb|CBI20166.3| unnamed protein product [Vitis vinifera]
Length = 277
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/279 (73%), Positives = 241/279 (86%), Gaps = 6/279 (2%)
Query: 7 EATENMTQLCRRVVHVNIRRSLFDRVSIFRRFFRFIWERILVCSIGKQPAVRYQKLTRRS 66
EAT MTQLCR++V VNIR + DRV+IF++FFRFIW+RI+VCSIGK +RY +L+RRS
Sbjct: 3 EATGKMTQLCRKIVRVNIRVRILDRVTIFQKFFRFIWDRIIVCSIGK--PIRYHRLSRRS 60
Query: 67 SSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNEQE 125
S +T+E+GL + ++G D+DSDLVSLKI ++GDCQIGKTSF +KYVG+EQE
Sbjct: 61 PPPSPSP-ETIESGLQSDDPSTAAG-DSDSDLVSLKICVMGDCQIGKTSFLIKYVGDEQE 118
Query: 126 RS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRC 184
+ L+M GLNL++KTL+VQ ARIAFSIWDVGGD S HVPIACKDAVAILFMFDLTSRC
Sbjct: 119 KKCLEMTGLNLMDKTLIVQDARIAFSIWDVGGDHTSLTHVPIACKDAVAILFMFDLTSRC 178
Query: 185 TLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFS 244
TLNS++GWYS+AR+WNQTAIPI+IGTKFDDFV+LPPDLQ I TQAR YA+AMKATLFFS
Sbjct: 179 TLNSVIGWYSQARRWNQTAIPIMIGTKFDDFVKLPPDLQRPIVTQARGYARAMKATLFFS 238
Query: 245 SATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
SATHNINVNKIFKFIMAKLFNLPWTV+RNLTIGEPIIDF
Sbjct: 239 SATHNINVNKIFKFIMAKLFNLPWTVQRNLTIGEPIIDF 277
>gi|357494385|ref|XP_003617481.1| Ras-related protein Rab-37 [Medicago truncatula]
gi|355518816|gb|AET00440.1| Ras-related protein Rab-37 [Medicago truncatula]
Length = 289
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/290 (68%), Positives = 242/290 (83%), Gaps = 8/290 (2%)
Query: 1 MAKIIHEATENMTQLCRRVVHVNIRRSLFDRVSIFRRFFRFIWERILVCSIGKQPAVRYQ 60
MAK+I E T+ MTQLCR++V V+++ + RVS +FFRFIW +++VCS+G+ PA +Y+
Sbjct: 1 MAKVIQETTKKMTQLCRKIVQVDVKYGMLQRVSFVGQFFRFIWNKLMVCSVGRSPA-QYR 59
Query: 61 KLTRRSSSESSPA-----PDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTS 115
+L+ SS SS + P T++ G + ++GY++DSDLV+LKISLLGDC IGKT+
Sbjct: 60 RLSLNHSSASSSSSLSPSPATVDDGFTREQQHTNNGYESDSDLVNLKISLLGDCHIGKTT 119
Query: 116 F-VKYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVA 173
F +KYVGNE E RSLQM GLNL++KTL VQGARI+F IWDV GD +S D +P+ACKDAVA
Sbjct: 120 FLIKYVGNEVEKRSLQMEGLNLMDKTLYVQGARISFCIWDVAGDKKSLDQIPMACKDAVA 179
Query: 174 ILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAY 233
+L MFDLTSR TLN++VGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTI TQARAY
Sbjct: 180 LLIMFDLTSRSTLNNVVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIVTQARAY 239
Query: 234 AKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
A+AMKATLFFSSATHNINVNKIFKFIMAKLFNLPWT++RNL +GEPIIDF
Sbjct: 240 ARAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTIERNLKVGEPIIDF 289
>gi|297796357|ref|XP_002866063.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata]
gi|297311898|gb|EFH42322.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata]
Length = 288
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/288 (65%), Positives = 226/288 (78%), Gaps = 7/288 (2%)
Query: 1 MAKIIHEATENMTQLCRRVVHVNIRRSLFDRVSIFRRFFRFIWERILVCSIGKQPAVRYQ 60
MA+ +HE +T CR++VHVNI+ + +RVSIF FFRF+W +I+ CS + + Y+
Sbjct: 1 MAEKVHEIAGKLTPFCRKIVHVNIKWRIIERVSIFGDFFRFLWRKIVSCSSIIEKPILYR 60
Query: 61 KLTRRSSSESSPAPDTMEAGLVELS---RTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV 117
++ R SS + D + E + R F SG +DSDLVSLKISLLGDCQ GKT+FV
Sbjct: 61 QIVHRISSTAGDIFDGDDDTATEHTVSTRRFGSG--SDSDLVSLKISLLGDCQTGKTTFV 118
Query: 118 -KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS-RSFDHVPIACKDAVAIL 175
KYVG+E + L+M GLNL++KT VQG I+FSIWDVGGD RS DH+PIACKDAVAIL
Sbjct: 119 IKYVGDENQGFLEMTGLNLMDKTFYVQGVTISFSIWDVGGDEKRSKDHIPIACKDAVAIL 178
Query: 176 FMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAK 235
FMFDLTSR TLN + GWYS+ARKWN+TAIPILIGTKFDDFVRLPP+LQWTI TQARAYAK
Sbjct: 179 FMFDLTSRSTLNRVFGWYSQARKWNKTAIPILIGTKFDDFVRLPPNLQWTIVTQARAYAK 238
Query: 236 AMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
MKA+LFFSSATHNINVNKIFKFI+AKLFNLPW + RNLT+GEPIID+
Sbjct: 239 VMKASLFFSSATHNINVNKIFKFILAKLFNLPWKIDRNLTLGEPIIDY 286
>gi|356567378|ref|XP_003551897.1| PREDICTED: septum-promoting GTP-binding protein 1-like [Glycine
max]
Length = 284
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/290 (66%), Positives = 223/290 (76%), Gaps = 13/290 (4%)
Query: 1 MAKIIHEATENMT----QLCRRVVH-VNIRRSLFDRVSIFRRFFRFIWERILVCSIGKQP 55
MAKII ++ T QLC R+VH VN+ +LF RVS RF IW+R+L+CS+G+
Sbjct: 1 MAKIIGKSRRRRTTTTQQLCHRMVHHVNVHCNLFHRVSFLGRF---IWDRMLLCSLGRP- 56
Query: 56 AVRYQKLTRRSSSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTS 115
Y +L R + + T S D+DSDLV+LKISLLGDC IGKTS
Sbjct: 57 --SYLRLPLRDPPPQATVHGGASMHGYPFTTTTPSPCDSDSDLVNLKISLLGDCHIGKTS 114
Query: 116 FV-KYVGNEQE-RSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVA 173
FV KYVG+EQE RSLQM GLNL++KTL VQGARI+FSIWDV GD+ S +P+ACKD+VA
Sbjct: 115 FVIKYVGDEQEKRSLQMKGLNLMDKTLFVQGARISFSIWDVAGDTGSLYQIPMACKDSVA 174
Query: 174 ILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAY 233
IL MFDLTSRCTLNS+VGWYS+ARKWNQ AIPILIGTKFDDFV+LPPD+QWTI TQARAY
Sbjct: 175 ILIMFDLTSRCTLNSVVGWYSKARKWNQIAIPILIGTKFDDFVKLPPDVQWTIVTQARAY 234
Query: 234 AKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
A+AM ATLFFSSATHNINVNKIFKFIMAKLFNLPW V+RNLT+GEP IDF
Sbjct: 235 ARAMNATLFFSSATHNINVNKIFKFIMAKLFNLPWKVERNLTLGEPTIDF 284
>gi|255648030|gb|ACU24471.1| unknown [Glycine max]
Length = 289
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/280 (68%), Positives = 222/280 (79%), Gaps = 20/280 (7%)
Query: 14 QLCRRVVH--VNIRRSLFDRVSIFRRFFRFIWERILVCSIGKQPAVRYQKLTRRSSSESS 71
QLC R+VH VN+R +LF +S RF IW+RIL+CS+G+ Y +L R S
Sbjct: 20 QLCNRMVHHHVNVRCNLFHSMSFLGRF---IWDRILLCSLGRP---SYLRLPLRDS---- 69
Query: 72 PAPDTMEAGLVEL-SRTFSSGY-----DTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQ 124
P P T+ G L F++ D+DSDLV+LKISLLGDC IGKTSFV KYVG+EQ
Sbjct: 70 PPPATVNGGGGSLHGHPFTTTTTTIPCDSDSDLVNLKISLLGDCHIGKTSFVIKYVGDEQ 129
Query: 125 E-RSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSR 183
E RSLQM GLNL++KTL VQGARI+FSIWDV GD S +P+ACKD+VAIL MFDLTSR
Sbjct: 130 EKRSLQMKGLNLMDKTLFVQGARISFSIWDVAGDPGSICQIPMACKDSVAILIMFDLTSR 189
Query: 184 CTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFF 243
CTLNS+VGWYS+ARKWNQTAIPILIGTKFDDFV+LPPD+QWTI TQARAYA+AMKATLFF
Sbjct: 190 CTLNSVVGWYSKARKWNQTAIPILIGTKFDDFVKLPPDVQWTIVTQARAYARAMKATLFF 249
Query: 244 SSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
SSA+HNINVNKIFKFIMAKLFNLPW V+RNLT+GEP IDF
Sbjct: 250 SSASHNINVNKIFKFIMAKLFNLPWKVERNLTLGEPTIDF 289
>gi|356530655|ref|XP_003533896.1| PREDICTED: septum-promoting GTP-binding protein 1-like [Glycine
max]
Length = 310
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 187/274 (68%), Positives = 216/274 (78%), Gaps = 8/274 (2%)
Query: 14 QLCRRVVH--VNIRRSLFDRVSIFRRFFRFIWERILVCSIGKQPAVRYQKLTRRSSSESS 71
QLC R+VH VN+R +LF +S RF IW+RIL+CS+G+ P+ L +
Sbjct: 41 QLCNRMVHHHVNVRCNLFHSMSFLGRF---IWDRILLCSLGR-PSYLRLPLRDPPPPATV 96
Query: 72 PAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQE-RSLQ 129
G + T + D+DSDLV+LKISLLGDC IGKTSFV KYVG+EQE RSLQ
Sbjct: 97 NGGGGSLHGHPFTTTTTTIPCDSDSDLVNLKISLLGDCHIGKTSFVIKYVGDEQEKRSLQ 156
Query: 130 MAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSI 189
M GLNL++KTL VQGARI+FSIWDV GD S +P+ACKD+VAIL MFDLTSRCTLNS+
Sbjct: 157 MKGLNLMDKTLFVQGARISFSIWDVAGDPGSICQIPMACKDSVAILIMFDLTSRCTLNSV 216
Query: 190 VGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHN 249
VGWYS+ARKWNQTAIPILIGTKFDDFV+LPPD+QWTI TQARAYA+AMKATLFFSSA+HN
Sbjct: 217 VGWYSKARKWNQTAIPILIGTKFDDFVKLPPDVQWTIVTQARAYARAMKATLFFSSASHN 276
Query: 250 INVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
INVNKIFKFIMAKLFNLPW V+RNLT+GEP IDF
Sbjct: 277 INVNKIFKFIMAKLFNLPWKVERNLTLGEPTIDF 310
>gi|255564003|ref|XP_002523001.1| sgp1 monomeric G-protein, putative [Ricinus communis]
gi|223537813|gb|EEF39431.1| sgp1 monomeric G-protein, putative [Ricinus communis]
Length = 245
Score = 360 bits (923), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 190/279 (68%), Positives = 217/279 (77%), Gaps = 41/279 (14%)
Query: 12 MTQLCRRV-VHVNIRRSLFDRVSIFRRFFRFIWERILVCSIGKQPAVRYQKLTRRSSSES 70
MTQ+CR++ +HV I+ S+ +RVS+FR+FF+FIW+RIL CSIGK VRY++LTR+ SS
Sbjct: 1 MTQICRKINLHVTIKWSILERVSVFRQFFQFIWDRILACSIGK--PVRYRRLTRQPSS-- 56
Query: 71 SPAPDTMEAGLV----ELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQE 125
P P+ +EAG ELS FS GY+ DSDLV LKISLLGDC+IGKTSFV KYVG+EQE
Sbjct: 57 -PPPEAIEAGGFAPSEELSSRFS-GYNADSDLVPLKISLLGDCRIGKTSFVVKYVGDEQE 114
Query: 126 RS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRC 184
+ L+M GLNL++KTL VQGARI FSIWDVGGDSRS DHVPIACKDAVAILFMFDLTSRC
Sbjct: 115 KKCLEMTGLNLMDKTLFVQGARITFSIWDVGGDSRSLDHVPIACKDAVAILFMFDLTSRC 174
Query: 185 TLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFS 244
TLNS+V WYS+ARKWNQ ARAYAKAMKATLFFS
Sbjct: 175 TLNSVVEWYSQARKWNQ----------------------------ARAYAKAMKATLFFS 206
Query: 245 SATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
SA HNINVNKIFKFIMAKLFNLPWT++RNLTIGEPIIDF
Sbjct: 207 SAKHNINVNKIFKFIMAKLFNLPWTLERNLTIGEPIIDF 245
>gi|15239761|ref|NP_200295.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|5824341|emb|CAB54517.1| SGP1 monomeric G-protein [Arabidopsis thaliana]
gi|9758264|dbj|BAB08763.1| SGP1 monomeric G-protein [Arabidopsis thaliana]
gi|332009163|gb|AED96546.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 288
Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 185/288 (64%), Positives = 224/288 (77%), Gaps = 7/288 (2%)
Query: 1 MAKIIHEATENMTQLCRRVVHVNIRRSLFDRVSIFRRFFRFIWERILVCSIGKQPAVRYQ 60
MA+ +HE +T CR++VHVN + + +RVSIF FFRF+W +I+ CS + + Y+
Sbjct: 1 MAEKVHEIAGKITPFCRKIVHVNRKWRIIERVSIFGDFFRFLWRKIVSCSSIIEKPILYR 60
Query: 61 KLTRRSSSESSPAPDTMEAGLVELS---RTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV 117
++ + SS + D + E + R F G +DSDLVSLKISLLGDCQ GKT+FV
Sbjct: 61 RIVHKISSTAGDIFDGDDDTTTEPTVSGRRF--GSSSDSDLVSLKISLLGDCQTGKTTFV 118
Query: 118 -KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS-RSFDHVPIACKDAVAIL 175
KYVG+E + L+M GLNL++KT VQG I+FSIWDVGGD RS DH+PIACKDAVAIL
Sbjct: 119 VKYVGDENQSFLEMTGLNLMDKTFYVQGVTISFSIWDVGGDEKRSKDHIPIACKDAVAIL 178
Query: 176 FMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAK 235
FMFDLTSR TLNS+ GWYS+ARKWN+TAIPILIGTKFDDFVRLPP+LQWTI TQARAYAK
Sbjct: 179 FMFDLTSRSTLNSVFGWYSQARKWNKTAIPILIGTKFDDFVRLPPNLQWTIVTQARAYAK 238
Query: 236 AMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
M A+LFFSSATHNINVNKIFKFI+A+LFNLPW + RNLT+GEPIID+
Sbjct: 239 VMNASLFFSSATHNINVNKIFKFILARLFNLPWKIDRNLTLGEPIIDY 286
>gi|449449613|ref|XP_004142559.1| PREDICTED: septum-promoting GTP-binding protein 1-like [Cucumis
sativus]
gi|449485370|ref|XP_004157147.1| PREDICTED: septum-promoting GTP-binding protein 1-like [Cucumis
sativus]
Length = 308
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 183/287 (63%), Positives = 218/287 (75%), Gaps = 13/287 (4%)
Query: 2 AKIIHEATEN-MTQLCRRVVHVNIRRSLFDRVSIFRRFFRFIWERILVCSIGKQPA--VR 58
+K+ H+AT MT+LCR++V R L +RVS+ R FFR +W+R+ CS G P R
Sbjct: 30 SKLAHDATSAAMTKLCRKLV----RWRLLERVSLVRHFFRLVWDRLFACSSGTTPKKYRR 85
Query: 59 YQKLTRRSSSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV- 117
+ ++ +PD S +DLVSLKISLLGDCQIGKTSFV
Sbjct: 86 LPSRSPPPPTDGGSSPDQPTTSGGFDSDFDFDS----ADLVSLKISLLGDCQIGKTSFVI 141
Query: 118 KYVGNEQER-SLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILF 176
KYVG+EQER SLQM+G+NL+NKTL +Q A I+F IWDV GDS S D +P+ACKDAVAILF
Sbjct: 142 KYVGDEQERNSLQMSGINLMNKTLNIQNALISFCIWDVKGDSSSQDQLPLACKDAVAILF 201
Query: 177 MFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKA 236
MFDLTSR TLNS+V WY+EARKWNQTAIPILIGTKFDDFVRLPP+LQWTI +QARAYA+
Sbjct: 202 MFDLTSRRTLNSVVDWYTEARKWNQTAIPILIGTKFDDFVRLPPNLQWTIVSQARAYARV 261
Query: 237 MKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
MKATLFFSS+ HNINVNKIFKFI AKLF++PW+++RNLTIGEPIIDF
Sbjct: 262 MKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSIERNLTIGEPIIDF 308
>gi|297739292|emb|CBI28943.3| unnamed protein product [Vitis vinifera]
Length = 1255
Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 172/305 (56%), Positives = 223/305 (73%), Gaps = 32/305 (10%)
Query: 4 IIHEATENMTQLCRRVVHVNIRRSLFDRVSIFRRFFRFIWERILVCSIGKQPAVRYQKLT 63
+ +A +M +L R+V +V +RR L RVS+ R +W+R L+ I + +++Y++L
Sbjct: 958 LFSKAILSMIKLSRKVFYVKLRRRLLCRVSLLGRCLMRLWDRFLL--ISRPKSIKYKQLL 1015
Query: 64 RRSSSESSPAPDTM-----------------------EAGLVELSRTFSSGYDTDSDLVS 100
R ++ + P P EAG D DSDLV+
Sbjct: 1016 RATTFAAKPVPSATTPAFPPPPPPPPPLPPPALQSSGEAGFARCRER-----DKDSDLVA 1070
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
LKISLLGDCQIGKTSFV KYVGNE+E+ +Q +G+NL++KTL V GARI++SIW+VGGD
Sbjct: 1071 LKISLLGDCQIGKTSFVIKYVGNEKEQGDIQTSGINLMDKTLYVGGARISYSIWEVGGDE 1130
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
++ +H+P+ACKD+VAIL+MFDLTSRCTLNS++ WY +ARKWNQ AIP+LIGTKFDDF++L
Sbjct: 1131 KAHNHIPMACKDSVAILYMFDLTSRCTLNSVISWYHQARKWNQNAIPVLIGTKFDDFIQL 1190
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGE 278
P DLQWT+A+QARAYAKA+ ATLFFSSAT+NINVNKIFKFI AKLFNLPWTV+RNLT+GE
Sbjct: 1191 PIDLQWTVASQARAYAKALNATLFFSSATYNINVNKIFKFITAKLFNLPWTVERNLTVGE 1250
Query: 279 PIIDF 283
P+IDF
Sbjct: 1251 PMIDF 1255
>gi|225447296|ref|XP_002279761.1| PREDICTED: septum-promoting GTP-binding protein 1-like [Vitis
vinifera]
Length = 290
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 171/297 (57%), Positives = 219/297 (73%), Gaps = 32/297 (10%)
Query: 12 MTQLCRRVVHVNIRRSLFDRVSIFRRFFRFIWERILVCSIGKQPAVRYQKLTRRSSSESS 71
M +L R+V +V +RR L RVS+ R +W+R L+ I + +++Y++L R ++ +
Sbjct: 1 MIKLSRKVFYVKLRRRLLCRVSLLGRCLMRLWDRFLL--ISRPKSIKYKQLLRATTFAAK 58
Query: 72 PAPDTM-----------------------EAGLVELSRTFSSGYDTDSDLVSLKISLLGD 108
P P EAG D DSDLV+LKISLLGD
Sbjct: 59 PVPSATTPAFPPPPPPPPPLPPPALQSSGEAGFARCRER-----DKDSDLVALKISLLGD 113
Query: 109 CQIGKTSFV-KYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPI 166
CQIGKTSFV KYVGNE+E+ +Q +G+NL++KTL V GARI++SIW+VGGD ++ +H+P+
Sbjct: 114 CQIGKTSFVIKYVGNEKEQGDIQTSGINLMDKTLYVGGARISYSIWEVGGDEKAHNHIPM 173
Query: 167 ACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTI 226
ACKD+VAIL+MFDLTSRCTLNS++ WY +ARKWNQ AIP+LIGTKFDDF++LP DLQWT+
Sbjct: 174 ACKDSVAILYMFDLTSRCTLNSVISWYHQARKWNQNAIPVLIGTKFDDFIQLPIDLQWTV 233
Query: 227 ATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
A+QARAYAKA+ ATLFFSSAT+NINVNKIFKFI AKLFNLPWTV+RNLT+GEP+IDF
Sbjct: 234 ASQARAYAKALNATLFFSSATYNINVNKIFKFITAKLFNLPWTVERNLTVGEPMIDF 290
>gi|357471237|ref|XP_003605903.1| Septum-promoting GTP-binding protein [Medicago truncatula]
gi|355506958|gb|AES88100.1| Septum-promoting GTP-binding protein [Medicago truncatula]
Length = 276
Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 173/280 (61%), Positives = 211/280 (75%), Gaps = 12/280 (4%)
Query: 12 MTQLCRRVVH-VNIRRSLFDRVSIFRRFFRFIWERILVCSIGKQPAVR--YQKLTRRS-- 66
M+ C + H +RR L RVS+ RR R+LVCS GKQP Y LT S
Sbjct: 1 MSDFCLKNGHSFALRRRLHSRVSLLRRCILRALHRLLVCS-GKQPGANATYSMLTPHSAL 59
Query: 67 -SSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNEQ 124
S +S T+E + F++ + D+DLVSLKISLLGDCQIGKTSF VKYVGNE+
Sbjct: 60 PSPRASLLDSTVETAIQ--PPVFNTN-ELDTDLVSLKISLLGDCQIGKTSFLVKYVGNEK 116
Query: 125 ERSL-QMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSR 183
E+ + Q G N ++KTL+V GARI++ IW+V GD +S D +P+ACKD+VAIL MFDLTSR
Sbjct: 117 EQGVEQRKGPNQMDKTLVVSGARISYCIWEVQGDGKSEDQLPMACKDSVAILIMFDLTSR 176
Query: 184 CTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFF 243
CTLNS++GWY EARKWNQTAIP+LIGTKFDDF++LP D+QWTIA++AR YAKA+ ATLFF
Sbjct: 177 CTLNSVLGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDMQWTIASEARTYAKALNATLFF 236
Query: 244 SSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
SSAT+NINVNKIFKFI AKLF+LPWTV+RNL +GEPIIDF
Sbjct: 237 SSATYNINVNKIFKFITAKLFDLPWTVERNLNVGEPIIDF 276
>gi|356542832|ref|XP_003539869.1| PREDICTED: septum-promoting GTP-binding protein 1-like [Glycine
max]
Length = 278
Score = 330 bits (846), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 167/265 (63%), Positives = 201/265 (75%), Gaps = 5/265 (1%)
Query: 24 IRRSLFDRVSIFRRFFRFIWERILVCSIGKQPAVRYQKLTRRSSSESSPAPDTMEAGLVE 83
+RR RVS+ +R + RIL+CS K Y L S P E G E
Sbjct: 14 VRRRFHHRVSLLQRCLLRVLHRILLCSGSKATNATYSMLPPALPSPPPPVSSDGELGREE 73
Query: 84 LSRTFSS---GYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQER-SLQMAGLNLINK 138
+ + S+ +D DSDLVSLKISLLGDCQIGKTSF+ KYVG+E+E+ Q GLN ++K
Sbjct: 74 MDLSSSAVFQTHDLDSDLVSLKISLLGDCQIGKTSFLAKYVGDEKEQQGNQREGLNQMDK 133
Query: 139 TLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK 198
TL+V+GARI++ IW+V GD +S D +P+AC D+VAIL MFDLTSRCTLNS+VGWY EARK
Sbjct: 134 TLVVEGARISYCIWEVQGDGKSEDQLPMACMDSVAILIMFDLTSRCTLNSVVGWYKEARK 193
Query: 199 WNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKF 258
WNQTAIP+LIGTKFDDF++LP DLQWTIA +AR YAKA+ ATLFFSSAT+NINVNKIFKF
Sbjct: 194 WNQTAIPVLIGTKFDDFIQLPIDLQWTIANEARKYAKALNATLFFSSATYNINVNKIFKF 253
Query: 259 IMAKLFNLPWTVKRNLTIGEPIIDF 283
I AKLF+LPWTV+RNLT+GEPIIDF
Sbjct: 254 ITAKLFDLPWTVERNLTVGEPIIDF 278
>gi|356517632|ref|XP_003527491.1| PREDICTED: septum-promoting GTP-binding protein 1-like [Glycine
max]
Length = 279
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/266 (62%), Positives = 201/266 (75%), Gaps = 6/266 (2%)
Query: 24 IRRSLFDRVSIFRRFFRFIWERILVCSIGKQPAVRYQKLTRRSSSESSPAPDTMEAGLVE 83
+RR RVS+ +R + RIL+CS K Y L S P E G E
Sbjct: 14 LRRRFHHRVSLLQRCLLRVLHRILLCSGSKPTNATYSMLPPALPSPPPPMGSDGELGREE 73
Query: 84 LSRTFSS---GYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNE--QERSLQMAGLNLIN 137
+ T S+ +D DSDLVSLKISLLGDCQIGKTSF+ KYVG+E Q++ Q GLN ++
Sbjct: 74 MDLTSSAVFHTHDLDSDLVSLKISLLGDCQIGKTSFLEKYVGDEKDQQQGNQREGLNQMD 133
Query: 138 KTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR 197
KTL+V+GARI++ IW+V GD +S D +P+AC D+VAIL MFDLTSRCTLNS+VGWY EAR
Sbjct: 134 KTLVVEGARISYCIWEVQGDGKSEDQLPMACMDSVAILIMFDLTSRCTLNSVVGWYKEAR 193
Query: 198 KWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 257
KWNQTAIP+LIGTKFDDF++LP DLQWTIA +AR YAKA+ ATLFFSSAT+NINVNKIFK
Sbjct: 194 KWNQTAIPVLIGTKFDDFIQLPIDLQWTIANEARKYAKALNATLFFSSATYNINVNKIFK 253
Query: 258 FIMAKLFNLPWTVKRNLTIGEPIIDF 283
F+ AKLF+LPWTV+RNLT+GEPIIDF
Sbjct: 254 FVTAKLFDLPWTVERNLTVGEPIIDF 279
>gi|125600478|gb|EAZ40054.1| hypothetical protein OsJ_24495 [Oryza sativa Japonica Group]
Length = 313
Score = 323 bits (829), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 167/303 (55%), Positives = 208/303 (68%), Gaps = 33/303 (10%)
Query: 7 EATENMTQLCRR---------------VVHVNIRRSLFDRVSIFRRFFRFIWERILVCSI 51
E T+ +TQLC + V+ +++R R+++ R R +W+++L
Sbjct: 18 EVTKAVTQLCAQGGGGGGRRRGRGRPAVLRLDLRWGRLLRLAVISRVVRLVWDQLLA--- 74
Query: 52 GKQPAVRYQKLTRRSSSESSPAPDTMEAGLV---------ELSRTFSSGYDTDSDLVSLK 102
P P + AG V + + D+VSLK
Sbjct: 75 ----CSSCAGGGGGRYRRLGPPPQGVAAGAVLSPLPRDADDDAAAADRDAADVEDVVSLK 130
Query: 103 ISLLGDCQIGKTSF-VKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDSRS 160
+SLLGDCQIGKTSF VKYVG+++E++ LQM GLNL++KTL V+GARIAFSIWDV GDS+
Sbjct: 131 VSLLGDCQIGKTSFMVKYVGDDEEQNGLQMTGLNLMDKTLAVRGARIAFSIWDVAGDSQF 190
Query: 161 FDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPP 220
DHVPIACKDAVAIL+MFDLTSRCTL +++ WY ARKWN+TAIPILIGTKFDDF +LP
Sbjct: 191 LDHVPIACKDAVAILYMFDLTSRCTLTNVIDWYERARKWNKTAIPILIGTKFDDFAQLPL 250
Query: 221 DLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPI 280
++QWTI +ARAYA+AMKATLFFSS+THNINVNKIFKFI AKLFNLPWTV+RNLT+GEPI
Sbjct: 251 EMQWTIVNEARAYARAMKATLFFSSSTHNINVNKIFKFITAKLFNLPWTVERNLTVGEPI 310
Query: 281 IDF 283
IDF
Sbjct: 311 IDF 313
>gi|226499814|ref|NP_001151110.1| septum-promoting GTP-binding protein 1 [Zea mays]
gi|195644366|gb|ACG41651.1| septum-promoting GTP-binding protein 1 [Zea mays]
gi|414590446|tpg|DAA41017.1| TPA: septum-promoting GTP-binding protein 1 [Zea mays]
Length = 300
Score = 323 bits (829), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 166/273 (60%), Positives = 204/273 (74%), Gaps = 10/273 (3%)
Query: 21 HVNIRRSLFDRVSIFRRFFRFIWERILVCSI---GKQPAVRYQKLTRRSSSES----SPA 73
+++R + R+++ R R +++L CS G RY++L +S+ + SP
Sbjct: 28 RLDLRWARLLRLAVVTRVLRLARDQLLACSSCGGGTAARRRYRRLGPPTSASAGPVLSPV 87
Query: 74 PDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGN--EQERSLQM 130
+ + D + ++VSLK+SLLGDCQIGKTSF VKYVG+ E++ LQM
Sbjct: 88 DRDDDCAADAEAAAPRDAADDEDNVVSLKVSLLGDCQIGKTSFMVKYVGDDGEEQNGLQM 147
Query: 131 AGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIV 190
GLNL++KT+ V+GARIA+SIWDV GD +S DHVPIACKDAVAIL+MFDLTSRCTLN+IV
Sbjct: 148 TGLNLMDKTMPVRGARIAYSIWDVAGDHQSVDHVPIACKDAVAILYMFDLTSRCTLNNIV 207
Query: 191 GWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNI 250
WY ARKWN+TAIPILIGTKFDDF +LP ++QW I QARAYA+AMKATLFFSSATHNI
Sbjct: 208 DWYGRARKWNKTAIPILIGTKFDDFAQLPLEMQWAIVNQARAYARAMKATLFFSSATHNI 267
Query: 251 NVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
NVNKIFKFI AKLFNLPWTV+RNLTIGEPIIDF
Sbjct: 268 NVNKIFKFITAKLFNLPWTVERNLTIGEPIIDF 300
>gi|33146727|dbj|BAC79616.1| putative Septum-promoting GTP-binding protein 1 (GTPase spg1)
[Oryza sativa Japonica Group]
Length = 297
Score = 323 bits (829), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 167/303 (55%), Positives = 208/303 (68%), Gaps = 33/303 (10%)
Query: 7 EATENMTQLCRR---------------VVHVNIRRSLFDRVSIFRRFFRFIWERILVCSI 51
E T+ +TQLC + V+ +++R R+++ R R +W+++L
Sbjct: 2 EVTKAVTQLCAQGGGGGGRRRGRGRPAVLRLDLRWGRLLRLAVISRVVRLVWDQLLA--- 58
Query: 52 GKQPAVRYQKLTRRSSSESSPAPDTMEAGLV---------ELSRTFSSGYDTDSDLVSLK 102
P P + AG V + + D+VSLK
Sbjct: 59 ----CSSCAGGGGGRYRRLGPPPQGVAAGAVLSPLPRDADDDAAAADRDAADVEDVVSLK 114
Query: 103 ISLLGDCQIGKTSF-VKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDSRS 160
+SLLGDCQIGKTSF VKYVG+++E++ LQM GLNL++KTL V+GARIAFSIWDV GDS+
Sbjct: 115 VSLLGDCQIGKTSFMVKYVGDDEEQNGLQMTGLNLMDKTLAVRGARIAFSIWDVAGDSQF 174
Query: 161 FDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPP 220
DHVPIACKDAVAIL+MFDLTSRCTL +++ WY ARKWN+TAIPILIGTKFDDF +LP
Sbjct: 175 LDHVPIACKDAVAILYMFDLTSRCTLTNVIDWYERARKWNKTAIPILIGTKFDDFAQLPL 234
Query: 221 DLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPI 280
++QWTI +ARAYA+AMKATLFFSS+THNINVNKIFKFI AKLFNLPWTV+RNLT+GEPI
Sbjct: 235 EMQWTIVNEARAYARAMKATLFFSSSTHNINVNKIFKFITAKLFNLPWTVERNLTVGEPI 294
Query: 281 IDF 283
IDF
Sbjct: 295 IDF 297
>gi|357116750|ref|XP_003560141.1| PREDICTED: septum-promoting GTP-binding protein 1-like
[Brachypodium distachyon]
Length = 305
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 162/264 (61%), Positives = 200/264 (75%), Gaps = 4/264 (1%)
Query: 23 NIRRSLFDRVSIFRRFFRFIWERILVCSIGKQPAVRYQKLTRRSSSESSPAPDTMEAGLV 82
++R + R+++ R R +W+++L CS RY++L P +E
Sbjct: 43 DLRWARLLRLAVATRVVRLVWDQLLACSSCGGGGGRYRRLGPPPHGGDVMCPVPIEDDDG 102
Query: 83 ELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGN--EQERSLQMAGLNLINKT 139
+ + + D+V LK+SLLGDCQIGKTSF VKYVG+ E++ LQM GLNL++KT
Sbjct: 103 GGAGADPDAGEVE-DVVGLKVSLLGDCQIGKTSFMVKYVGDDGEEQNGLQMTGLNLMDKT 161
Query: 140 LMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW 199
L V+GAR+AF+IWDV GDS+S DHVPIACKDAVAILFMFDLTSRCTLN+ + W+ ARKW
Sbjct: 162 LAVRGARLAFNIWDVAGDSQSIDHVPIACKDAVAILFMFDLTSRCTLNNTIDWHERARKW 221
Query: 200 NQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 259
N+TAIPILIGTKFDDF +LP ++QWTI +ARAYA+AMKATLFFSSATHNINVNKIFKFI
Sbjct: 222 NKTAIPILIGTKFDDFAQLPLEMQWTIVNEARAYARAMKATLFFSSATHNINVNKIFKFI 281
Query: 260 MAKLFNLPWTVKRNLTIGEPIIDF 283
AKLFNLPWTV+RNLT+GEPIIDF
Sbjct: 282 TAKLFNLPWTVERNLTVGEPIIDF 305
>gi|218199739|gb|EEC82166.1| hypothetical protein OsI_26241 [Oryza sativa Indica Group]
Length = 313
Score = 317 bits (812), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 149/190 (78%), Positives = 173/190 (91%), Gaps = 2/190 (1%)
Query: 96 SDLVSLKISLLGDCQIGKTSF-VKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWD 153
D+VSLK+SLLGDCQIGKTSF VKYVG+++E++ LQM GLNL++KTL V+GARIAFSIWD
Sbjct: 124 EDVVSLKVSLLGDCQIGKTSFMVKYVGDDEEQNGLQMTGLNLMDKTLAVRGARIAFSIWD 183
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFD 213
V GDS+ DHVPIACKDAVAIL+MFDLTSRCTL +++ WY ARKWN+TAIPILIGTKFD
Sbjct: 184 VAGDSQFLDHVPIACKDAVAILYMFDLTSRCTLTNVIDWYERARKWNKTAIPILIGTKFD 243
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRN 273
DF +LP ++QWTI +ARAYA+AMKATLFFSS+THNINVNKIFKFI AKLFNLPWTV+RN
Sbjct: 244 DFAQLPLEMQWTIVNEARAYARAMKATLFFSSSTHNINVNKIFKFITAKLFNLPWTVERN 303
Query: 274 LTIGEPIIDF 283
LT+GEPIIDF
Sbjct: 304 LTVGEPIIDF 313
>gi|30686351|ref|NP_850622.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|11994637|dbj|BAB02832.1| unnamed protein product [Arabidopsis thaliana]
gi|22316556|emb|CAD44270.1| monomeric G-protein [Arabidopsis thaliana]
gi|332643018|gb|AEE76539.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 292
Score = 312 bits (800), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 164/272 (60%), Positives = 203/272 (74%), Gaps = 25/272 (9%)
Query: 34 IFRRFFRFIWERILVCSIGKQPAVRYQKLTRR--SSSESSPAPDTMEA---------GLV 82
I RRF R +W RI+ C+ GK + RY L+R S + S P+P + A G
Sbjct: 24 ILRRFTRLLWSRIVACTPGK--SRRYLLLSRALPSPTVSRPSPSPIPAVDVVVGGGGGGG 81
Query: 83 ELSRTFSSGYD-------TDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQE---RSLQMA 131
E R S YD +DSDLVSLKISLLGD +IGKTSF+ KYVG E+E R L+
Sbjct: 82 EFVRRSSVVYDNDNSHRRSDSDLVSLKISLLGDPEIGKTSFLAKYVGEEKEVEMRELE-K 140
Query: 132 GLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVG 191
G+N +KTL + GARI++SIW++ G RS D +P+ACKD+VAILFMFDLTSRCTLNS++
Sbjct: 141 GINCTDKTLYMGGARISYSIWELEGAERSRDQIPVACKDSVAILFMFDLTSRCTLNSVIS 200
Query: 192 WYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNIN 251
WY +ARK NQTAIP+++GTKFD+F++LP DLQWTIA+QAR YAKA+ ATLFFSSA++NIN
Sbjct: 201 WYQQARKSNQTAIPVMVGTKFDEFIQLPIDLQWTIASQARTYAKALNATLFFSSASYNIN 260
Query: 252 VNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
VNKIFKF+ AKLF+LPWTV+RNLTIGEPIIDF
Sbjct: 261 VNKIFKFVTAKLFDLPWTVERNLTIGEPIIDF 292
>gi|414886932|tpg|DAA62946.1| TPA: hypothetical protein ZEAMMB73_463136 [Zea mays]
Length = 308
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/190 (77%), Positives = 170/190 (89%), Gaps = 3/190 (1%)
Query: 97 DLVSLKISLLGDCQIGKTSF-VKYVGN--EQERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++VSLK+SLLGDCQIGKTSF VKYVG+ E + LQM GLNL++K + V+GA+IA+SIWD
Sbjct: 119 NVVSLKVSLLGDCQIGKTSFMVKYVGDDGEDQNGLQMTGLNLMDKMMAVRGAKIAYSIWD 178
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFD 213
V GD +S DH+PIACKDAVAIL+MFDLTSRCTLN+IV WY ARKWN+TAIPILIGTKFD
Sbjct: 179 VAGDHQSVDHIPIACKDAVAILYMFDLTSRCTLNNIVDWYERARKWNKTAIPILIGTKFD 238
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRN 273
DF +LP ++QWTI QARAYA+AMKATLFFSSATHNINVNKIFKFI AKLF+LPWTV+RN
Sbjct: 239 DFAQLPLEMQWTIVNQARAYARAMKATLFFSSATHNINVNKIFKFITAKLFDLPWTVERN 298
Query: 274 LTIGEPIIDF 283
LTIGEPIIDF
Sbjct: 299 LTIGEPIIDF 308
>gi|18403119|ref|NP_566690.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|21592655|gb|AAM64604.1| putative SGP1 monomeric G-protein [Arabidopsis thaliana]
gi|332643019|gb|AEE76540.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 291
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 163/272 (59%), Positives = 203/272 (74%), Gaps = 26/272 (9%)
Query: 34 IFRRFFRFIWERILVCSIGKQPAVRYQKLTRR--SSSESSPAPDTMEA---------GLV 82
I RRF R +W RI+ C+ GK + RY L+R S + S P+P + A G
Sbjct: 24 ILRRFTRLLWSRIVACTPGK--SRRYLLLSRALPSPTVSRPSPSPIPAVDVVVGGGGGGG 81
Query: 83 ELSRTFSSGYD-------TDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQE---RSLQMA 131
E R S YD +DSDLVSLKISLLGD +IGKTSF+ KYVG E+E R L+
Sbjct: 82 EFVRRSSVVYDNDNSHRRSDSDLVSLKISLLGDPEIGKTSFLAKYVGEEKEVEMRELE-K 140
Query: 132 GLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVG 191
G+N +KTL + GARI++SIW++ + RS D +P+ACKD+VAILFMFDLTSRCTLNS++
Sbjct: 141 GINCTDKTLYMGGARISYSIWELEAE-RSRDQIPVACKDSVAILFMFDLTSRCTLNSVIS 199
Query: 192 WYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNIN 251
WY +ARK NQTAIP+++GTKFD+F++LP DLQWTIA+QAR YAKA+ ATLFFSSA++NIN
Sbjct: 200 WYQQARKSNQTAIPVMVGTKFDEFIQLPIDLQWTIASQARTYAKALNATLFFSSASYNIN 259
Query: 252 VNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
VNKIFKF+ AKLF+LPWTV+RNLTIGEPIIDF
Sbjct: 260 VNKIFKFVTAKLFDLPWTVERNLTIGEPIIDF 291
>gi|297830864|ref|XP_002883314.1| hypothetical protein ARALYDRAFT_479691 [Arabidopsis lyrata subsp.
lyrata]
gi|297329154|gb|EFH59573.1| hypothetical protein ARALYDRAFT_479691 [Arabidopsis lyrata subsp.
lyrata]
Length = 293
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 159/273 (58%), Positives = 196/273 (71%), Gaps = 26/273 (9%)
Query: 34 IFRRFFRFIWERILVCSIGKQPAVRYQKLTR------------RSSSESSPAPDTMEAGL 81
I RRF R +W RI+ C+ GK + RY L+R + + G
Sbjct: 24 ILRRFTRLLWSRIVACTPGK--SRRYLLLSRAVPSPTVSRPSPPPPIPAVDVDVVVVGGG 81
Query: 82 VELSRTFSSGYD-------TDSDLVSLKISLLGDCQIGKTSFV-KYVGNE---QERSLQM 130
E R S YD +DSDLVSLKISLLGD +IGKTSF+ KYVG E + R L+
Sbjct: 82 GEFVRRSSVVYDNDNSHRRSDSDLVSLKISLLGDPEIGKTSFLAKYVGEEKGVEMRELE- 140
Query: 131 AGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIV 190
G+N +KTL + GARI++SIWD+ G RS D +P+ACKD+VAILFMFDLTSRCTLNS++
Sbjct: 141 KGINCTDKTLYMGGARISYSIWDLEGAERSRDQIPVACKDSVAILFMFDLTSRCTLNSVI 200
Query: 191 GWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNI 250
WY +ARK NQTAIP+++GTKFD+F++LP DLQWTIA+QAR YAKA+ ATLFFSSA++NI
Sbjct: 201 SWYQQARKSNQTAIPVMVGTKFDEFIQLPIDLQWTIASQARTYAKALNATLFFSSASYNI 260
Query: 251 NVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
NVNKIFKF+ AKLF+LPWTV+RNLTIGEPIIDF
Sbjct: 261 NVNKIFKFVTAKLFDLPWTVERNLTIGEPIIDF 293
>gi|449468350|ref|XP_004151884.1| PREDICTED: septum-promoting GTP-binding protein 1-like [Cucumis
sativus]
gi|449526441|ref|XP_004170222.1| PREDICTED: septum-promoting GTP-binding protein 1-like [Cucumis
sativus]
Length = 262
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 152/264 (57%), Positives = 190/264 (71%), Gaps = 15/264 (5%)
Query: 24 IRRSLFDRVSIFRRFFRFIWERILVCSIGKQPAVRYQKLTRRSSS--ESSPAPDTMEAGL 81
+RR R + +R ++ IL C K+P S+S + P+T+ L
Sbjct: 10 LRRFTLTRRNALKRHACHFFDSILTCYSSKKPETYDDAALASSASVVDQEFMPETLTPSL 69
Query: 82 VELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKT 139
+ DLVSLKISLLGD QIGKT+F VKYVGNE E + GL L++KT
Sbjct: 70 CH-----------NPDLVSLKISLLGDSQIGKTTFLVKYVGNEMDEEKSEQTGLKLMDKT 118
Query: 140 LMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW 199
LMV+GARI +SIW+V GD++S D++ ACK +VAIL+MFDLTSR TLN+ + WY +AR+W
Sbjct: 119 LMVRGARIYYSIWEVEGDTKSQDYISTACKGSVAILYMFDLTSRRTLNNTLRWYRQARRW 178
Query: 200 NQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 259
NQTAIP+LIGTKFDDF++LP DLQW IA++ARAYAKA+ ATLFFSSAT+NINVNKIFKFI
Sbjct: 179 NQTAIPVLIGTKFDDFIQLPIDLQWAIASEARAYAKALNATLFFSSATYNINVNKIFKFI 238
Query: 260 MAKLFNLPWTVKRNLTIGEPIIDF 283
AKLF+LPWT++RNLTIGEPIIDF
Sbjct: 239 TAKLFDLPWTIERNLTIGEPIIDF 262
>gi|224131576|ref|XP_002321122.1| predicted protein [Populus trichocarpa]
gi|222861895|gb|EEE99437.1| predicted protein [Populus trichocarpa]
Length = 207
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/194 (70%), Positives = 168/194 (86%), Gaps = 2/194 (1%)
Query: 92 YDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAF 149
+D DSDLV+LKISLLGDCQIGKTSF+ KYVGNE++ ++ GL L+ KTLMV+ ARI++
Sbjct: 14 HDNDSDLVALKISLLGDCQIGKTSFLAKYVGNEKDEGVKHNNGLKLMKKTLMVKDARISY 73
Query: 150 SIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIG 209
S+W++ GD +P+ACK +VAIL MFDLTSR TLNS++ WY EAR+WNQTA+P++IG
Sbjct: 74 SLWELDGDEGLEQQIPVACKGSVAILIMFDLTSRVTLNSVIRWYQEARRWNQTAVPVIIG 133
Query: 210 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWT 269
TKFDDF++LP DLQWTIA+QARAYAK + ATLFFSSAT+NINVNKIFKFI AKLF+LPWT
Sbjct: 134 TKFDDFIQLPIDLQWTIASQARAYAKVLNATLFFSSATYNINVNKIFKFITAKLFDLPWT 193
Query: 270 VKRNLTIGEPIIDF 283
++RNLTIGEPIIDF
Sbjct: 194 LERNLTIGEPIIDF 207
>gi|115472433|ref|NP_001059815.1| Os07g0522900 [Oryza sativa Japonica Group]
gi|113611351|dbj|BAF21729.1| Os07g0522900, partial [Oryza sativa Japonica Group]
Length = 168
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 131/168 (77%), Positives = 153/168 (91%), Gaps = 1/168 (0%)
Query: 117 VKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAIL 175
VKYVG+++E++ LQM GLNL++KTL V+GARIAFSIWDV GDS+ DHVPIACKDAVAIL
Sbjct: 1 VKYVGDDEEQNGLQMTGLNLMDKTLAVRGARIAFSIWDVAGDSQFLDHVPIACKDAVAIL 60
Query: 176 FMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAK 235
+MFDLTSRCTL +++ WY ARKWN+TAIPILIGTKFDDF +LP ++QWTI +ARAYA+
Sbjct: 61 YMFDLTSRCTLTNVIDWYERARKWNKTAIPILIGTKFDDFAQLPLEMQWTIVNEARAYAR 120
Query: 236 AMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
AMKATLFFSS+THNINVNKIFKFI AKLFNLPWTV+RNLT+GEPIIDF
Sbjct: 121 AMKATLFFSSSTHNINVNKIFKFITAKLFNLPWTVERNLTVGEPIIDF 168
>gi|242045844|ref|XP_002460793.1| hypothetical protein SORBIDRAFT_02g034970 [Sorghum bicolor]
gi|241924170|gb|EER97314.1| hypothetical protein SORBIDRAFT_02g034970 [Sorghum bicolor]
Length = 154
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/154 (81%), Positives = 140/154 (90%)
Query: 130 MAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSI 189
M GLNL++KT+ V+GARIA+SIWDV GD +S DH+PIACKDAVAIL+MFDLTSRCTLN+I
Sbjct: 1 MTGLNLMDKTMAVRGARIAYSIWDVAGDHQSVDHIPIACKDAVAILYMFDLTSRCTLNNI 60
Query: 190 VGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHN 249
V WY ARKWN+TAIPILIGTKFDDF +LP ++QW I QARAYA+AMKATLFFSSATHN
Sbjct: 61 VDWYERARKWNKTAIPILIGTKFDDFAQLPLEMQWAIVNQARAYARAMKATLFFSSATHN 120
Query: 250 INVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
INVNKIFKFI AKLFNLPWTV+RNLTIGEPIIDF
Sbjct: 121 INVNKIFKFITAKLFNLPWTVERNLTIGEPIIDF 154
>gi|147770661|emb|CAN66740.1| hypothetical protein VITISV_021643 [Vitis vinifera]
Length = 204
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/246 (50%), Positives = 156/246 (63%), Gaps = 61/246 (24%)
Query: 57 VRYQKLTRRSSSESSPAPDTMEAGLV-------------ELSRTFSSGY------DTDSD 97
++Y++L R ++ + P P L + +G+ D DSD
Sbjct: 1 IKYKQLLRATTFAAKPVPSATTPAFPPPPPPPPPPLPPPALQSSGEAGFARCRERDKDSD 60
Query: 98 LVSLKISLLGDCQIGKTSFVKYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
LV+LKISLLGDCQIGKTSFV GD
Sbjct: 61 LVALKISLLGDCQIGKTSFVV-------------------------------------GD 83
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVR 217
++ +H+P+ACKD+VAIL+MFDLTS S++ WY +ARKWNQ AIP+LIGTKFDDF++
Sbjct: 84 EKAHNHIPMACKDSVAILYMFDLTS-----SVISWYHQARKWNQNAIPVLIGTKFDDFIQ 138
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIG 277
LP DLQWT+A+QARAYAKA+ ATLFFSSAT+NINVNKIFKFI AKLFNLPWTV+RNLT+G
Sbjct: 139 LPIDLQWTVASQARAYAKALNATLFFSSATYNINVNKIFKFITAKLFNLPWTVERNLTVG 198
Query: 278 EPIIDF 283
EP+IDF
Sbjct: 199 EPMIDF 204
>gi|326502398|dbj|BAJ95262.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 240
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/228 (52%), Positives = 150/228 (65%), Gaps = 13/228 (5%)
Query: 12 MTQLCRRVVHV-------NIRRSLFDRVSIFRRFFRFIWERILVCSIGKQPAVRYQKLTR 64
+TQLC R ++R + R+++ R R +W+++L CS +
Sbjct: 11 VTQLCGRGRRRRPAALRLDLRWARLLRLAVATRVVRLVWDQLLACSSCGGGGRYRRLGPP 70
Query: 65 RSSSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGN- 122
SP +AG + ++ D+V LK+SLLGDCQIGKTSF VKYVG+
Sbjct: 71 HGPDLLSPVAMDDDAGAAVDAHADAA---DVEDVVGLKVSLLGDCQIGKTSFMVKYVGDG 127
Query: 123 -EQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLT 181
EQ LQM GLNL++KTL V+GAR+AF+IWDV GDS+S DHVPIACKDAVAILFMFDLT
Sbjct: 128 EEQNGGLQMTGLNLMDKTLAVRGARLAFNIWDVAGDSQSADHVPIACKDAVAILFMFDLT 187
Query: 182 SRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQ 229
SRCTLN+I WY ARKWN+TAIPILIGTKFDDF +LP ++QWTI Q
Sbjct: 188 SRCTLNNITDWYERARKWNKTAIPILIGTKFDDFAQLPLEMQWTIVDQ 235
>gi|30686347|ref|NP_850621.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|332643020|gb|AEE76541.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 248
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/218 (54%), Positives = 152/218 (69%), Gaps = 26/218 (11%)
Query: 34 IFRRFFRFIWERILVCSIGKQPAVRYQKLTRR--SSSESSPAPDTMEA---------GLV 82
I RRF R +W RI+ C+ GK + RY L+R S + S P+P + A G
Sbjct: 24 ILRRFTRLLWSRIVACTPGK--SRRYLLLSRALPSPTVSRPSPSPIPAVDVVVGGGGGGG 81
Query: 83 ELSRTFSSGYD-------TDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQE---RSLQMA 131
E R S YD +DSDLVSLKISLLGD +IGKTSF+ KYVG E+E R L+
Sbjct: 82 EFVRRSSVVYDNDNSHRRSDSDLVSLKISLLGDPEIGKTSFLAKYVGEEKEVEMRELE-K 140
Query: 132 GLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVG 191
G+N +KTL + GARI++SIW++ + RS D +P+ACKD+VAILFMFDLTSRCTLNS++
Sbjct: 141 GINCTDKTLYMGGARISYSIWELEAE-RSRDQIPVACKDSVAILFMFDLTSRCTLNSVIS 199
Query: 192 WYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQ 229
WY +ARK NQTAIP+++GTKFD+F++LP DLQWTIA+Q
Sbjct: 200 WYQQARKSNQTAIPVMVGTKFDEFIQLPIDLQWTIASQ 237
>gi|42573674|ref|NP_974933.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|124301146|gb|ABN04825.1| At5g54840 [Arabidopsis thaliana]
gi|332009164|gb|AED96547.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 215
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/206 (55%), Positives = 147/206 (71%), Gaps = 7/206 (3%)
Query: 1 MAKIIHEATENMTQLCRRVVHVNIRRSLFDRVSIFRRFFRFIWERILVCSIGKQPAVRYQ 60
MA+ +HE +T CR++VHVN + + +RVSIF FFRF+W +I+ CS + + Y+
Sbjct: 1 MAEKVHEIAGKITPFCRKIVHVNRKWRIIERVSIFGDFFRFLWRKIVSCSSIIEKPILYR 60
Query: 61 KLTRRSSSESSPAPDTMEAGLVELS---RTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV 117
++ + SS + D + E + R F G +DSDLVSLKISLLGDCQ GKT+FV
Sbjct: 61 RIVHKISSTAGDIFDGDDDTTTEPTVSGRRF--GSSSDSDLVSLKISLLGDCQTGKTTFV 118
Query: 118 -KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS-RSFDHVPIACKDAVAIL 175
KYVG+E + L+M GLNL++KT VQG I+FSIWDVGGD RS DH+PIACKDAVAIL
Sbjct: 119 VKYVGDENQSFLEMTGLNLMDKTFYVQGVTISFSIWDVGGDEKRSKDHIPIACKDAVAIL 178
Query: 176 FMFDLTSRCTLNSIVGWYSEARKWNQ 201
FMFDLTSR TLNS+ GWYS+ARKWN+
Sbjct: 179 FMFDLTSRSTLNSVFGWYSQARKWNK 204
>gi|242044408|ref|XP_002460075.1| hypothetical protein SORBIDRAFT_02g022380 [Sorghum bicolor]
gi|241923452|gb|EER96596.1| hypothetical protein SORBIDRAFT_02g022380 [Sorghum bicolor]
Length = 139
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/127 (72%), Positives = 109/127 (85%), Gaps = 2/127 (1%)
Query: 117 VKYVGN--EQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAI 174
VKYVG+ E++ LQM GLNL++KT+ V+GARIA+SIWDV GD +S DH+PIACKDAVAI
Sbjct: 7 VKYVGDDGEEQNGLQMTGLNLMDKTMAVRGARIAYSIWDVAGDHQSVDHIPIACKDAVAI 66
Query: 175 LFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYA 234
L+MFDLTSRC LN+IV WY ARKWN+TAIPILIGTKFDDF +LP ++QW I QARAYA
Sbjct: 67 LYMFDLTSRCMLNNIVDWYERARKWNKTAIPILIGTKFDDFAQLPLEMQWAIVNQARAYA 126
Query: 235 KAMKATL 241
+AMKATL
Sbjct: 127 RAMKATL 133
>gi|358382417|gb|EHK20089.1| hypothetical protein TRIVIDRAFT_138117, partial [Trichoderma virens
Gv29-8]
Length = 229
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/229 (45%), Positives = 143/229 (62%), Gaps = 7/229 (3%)
Query: 55 PAVRYQKLTRRSSSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKT 114
P V L+R +S S+PAP R S V +K+ ++GD QIGKT
Sbjct: 2 PPVSGPSLSRPASGLSNPAPPPYND-----YRPSSGDQSNGRSHVVIKVGMVGDAQIGKT 56
Query: 115 SF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAV 172
S VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG + +P+ C DAV
Sbjct: 57 SLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVCNDAV 116
Query: 173 AILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARA 232
AILFMFDLT + TLNSI WY + R +N+TAIP+L+GTK+D FV P Q I+ QAR
Sbjct: 117 AILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPVLVGTKYDHFVNFPIQDQEEISNQARR 176
Query: 233 YAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPII 281
+AKAM+A+L FSS +H+INV KIFK +++K F+L T+ +GEP++
Sbjct: 177 FAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENVGEPLL 225
>gi|389629378|ref|XP_003712342.1| septum-promoting GTP-binding protein 1 [Magnaporthe oryzae 70-15]
gi|351644674|gb|EHA52535.1| septum-promoting GTP-binding protein 1 [Magnaporthe oryzae 70-15]
gi|440465432|gb|ELQ34752.1| septum-promoting GTP-binding protein 1 [Magnaporthe oryzae Y34]
gi|440481521|gb|ELQ62100.1| septum-promoting GTP-binding protein 1 [Magnaporthe oryzae P131]
Length = 311
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/195 (49%), Positives = 134/195 (68%), Gaps = 2/195 (1%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGAR 146
S DT + V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++
Sbjct: 112 GSNRDTGRNHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTE 171
Query: 147 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 206
I FSIWD+GG + +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIPI
Sbjct: 172 ITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPI 231
Query: 207 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
L+GTK+D FV P + Q I+ QAR +AKAM+A+L FSS +H+INV KIFK +++K F+L
Sbjct: 232 LVGTKYDHFVNFPREDQEEISNQARRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDL 291
Query: 267 PWTVKRNLTIGEPII 281
T+ +GEP++
Sbjct: 292 KCTIPEIENVGEPLL 306
>gi|408393465|gb|EKJ72729.1| hypothetical protein FPSE_07129 [Fusarium pseudograminearum CS3096]
Length = 292
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/230 (46%), Positives = 145/230 (63%), Gaps = 9/230 (3%)
Query: 54 QPAVRYQKLTRRSSSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGK 113
QPA L+R +S S+PA S+G + V +K+ ++GD QIGK
Sbjct: 65 QPA---PPLSRPASGLSNPAHQAYNDYRQGAGEPSSNGRNH----VVIKVGMVGDAQIGK 117
Query: 114 TSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDA 171
TS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG + +P+ C DA
Sbjct: 118 TSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVCNDA 177
Query: 172 VAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQAR 231
VAILFMFDLT + TLNSI WY + R +N+TAIPIL+GTK+D FV PP Q I+ QAR
Sbjct: 178 VAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDHFVNFPPQDQEEISNQAR 237
Query: 232 AYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPII 281
+AKAM+A L FSS +H+INV KIFK +++K F+L T+ +GEP++
Sbjct: 238 RFAKAMRAALIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENVGEPLL 287
>gi|259483460|tpe|CBF78868.1| TPA: GTP binding protein (SPG1), putative (AFU_orthologue;
AFUA_6G10330) [Aspergillus nidulans FGSC A4]
Length = 314
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 134/200 (67%), Gaps = 2/200 (1%)
Query: 84 LSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLM 141
LS T T + V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+
Sbjct: 110 LSGTQKQPAQTTKNSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTIS 169
Query: 142 VQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQ 201
++ I FSIWD+GG + +P+ C DAVAILFMFDLT + TLNSI WY + R +N+
Sbjct: 170 IRNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNK 229
Query: 202 TAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMA 261
TAIP L+GTK+D FV P + Q I+ QA+ +AKAMKA+L FSS +H+INV KIFK ++A
Sbjct: 230 TAIPFLVGTKYDHFVNFPREDQEEISIQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLA 289
Query: 262 KLFNLPWTVKRNLTIGEPII 281
K F+L T+ IGEP++
Sbjct: 290 KAFDLKCTIPEIENIGEPLL 309
>gi|303314601|ref|XP_003067309.1| septum-promoting GTP-binding protein, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240106977|gb|EER25164.1| septum-promoting GTP-binding protein, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320037626|gb|EFW19563.1| septum-promoting GTP-binding protein 1 [Coccidioides posadasii str.
Silveira]
gi|392869964|gb|EAS28508.2| septum-promoting GTP-binding protein 1 [Coccidioides immitis RS]
Length = 334
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 104/237 (43%), Positives = 148/237 (62%), Gaps = 11/237 (4%)
Query: 55 PAVRYQKLTRRSSSESSPAPDTMEAG--------LVELSRTFSSGYDTDSDLVSLKISLL 106
P + YQ+L + S S P G E + SG + + +V +K+ ++
Sbjct: 94 PTMAYQQLQQVPQSSSRPGSGLSSGGDRYGYSQSHSEQTSRPQSGPPSKNSVV-IKVGMV 152
Query: 107 GDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHV 164
GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG + +
Sbjct: 153 GDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNML 212
Query: 165 PIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQW 224
P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP+L+GTK+D FV P + Q
Sbjct: 213 PLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPLLVGTKYDHFVNFPREDQE 272
Query: 225 TIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPII 281
I+ QA+ +AKAM+A+L FSS +H+INV KIFK +++K F+L T+ IGEP++
Sbjct: 273 EISIQAKRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENIGEPLL 329
>gi|449302381|gb|EMC98390.1| hypothetical protein BAUCODRAFT_121261 [Baudoinia compniacensis
UAMH 10762]
Length = 272
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 130/185 (70%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 82 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 141
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D FV
Sbjct: 142 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 201
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+TQAR +AKAMKA+L FSS +H+INV KIFK ++AK F+L T+ +
Sbjct: 202 NFPREEQEEISTQARRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLRCTIPEIEHV 261
Query: 277 GEPII 281
GEP++
Sbjct: 262 GEPLL 266
>gi|358367457|dbj|GAA84076.1| GTP binding protein [Aspergillus kawachii IFO 4308]
Length = 311
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 104/233 (44%), Positives = 147/233 (63%), Gaps = 5/233 (2%)
Query: 54 QPAVRYQKLTRRSSSESSPAPDT-MEAGLVELSRTFSSGYDTDS--DLVSLKISLLGDCQ 110
QP + LT + S+ P + M L + + S + + + V +K+ ++GD Q
Sbjct: 74 QPRQNFSPLTHQPQPLSTSRPSSEMSNNLPQPTHDVSQKQPSQAAKNSVVIKVGMVGDAQ 133
Query: 111 IGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIAC 168
IGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG + +P+ C
Sbjct: 134 IGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVC 193
Query: 169 KDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIAT 228
DAVAILFMFDLT + TLNSI WY + R +N+TAIP LIGTK+D FV P + Q I+
Sbjct: 194 NDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKYDHFVNFPREDQEEISI 253
Query: 229 QARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPII 281
QA+ +AKAMKA+L FSS +H+INV KIFK ++AK F+L T+ +GEP++
Sbjct: 254 QAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLKCTIPEIENVGEPLL 306
>gi|19114197|ref|NP_593285.1| GTPase Spg1 [Schizosaccharomyces pombe 972h-]
gi|21542235|sp|P87027.1|SPG1_SCHPO RecName: Full=Septum-promoting GTP-binding protein 1; AltName:
Full=GTPase spg1; AltName: Full=Sid3 protein
gi|1935000|emb|CAA72985.1| GTPase [Schizosaccharomyces pombe]
gi|9408178|emb|CAB99273.1| GTPase Spg1 [Schizosaccharomyces pombe]
Length = 198
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 133/193 (68%), Gaps = 2/193 (1%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFS 150
D + V++K+ ++GD IGKTS V YV G+ E S Q G+N + KT+ ++ I FS
Sbjct: 3 DARKNNVTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFS 62
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGT 210
IWD+GG + +P+ C DAVAILFMFDL+ + TLNSI WY +AR +N+TA+PILIGT
Sbjct: 63 IWDLGGQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAVPILIGT 122
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTV 270
K+D F+ P + Q I QAR YAKAMKA+L F S +H+INV KIFK ++AK+F+L T+
Sbjct: 123 KYDHFMTFPREDQEEITKQARRYAKAMKASLVFCSTSHSINVQKIFKIVLAKVFDLKCTI 182
Query: 271 KRNLTIGEPIIDF 283
+G+PI+++
Sbjct: 183 PEIKNVGDPILEY 195
>gi|367024885|ref|XP_003661727.1| hypothetical protein MYCTH_2077959 [Myceliophthora thermophila ATCC
42464]
gi|347008995|gb|AEO56482.1| hypothetical protein MYCTH_2077959 [Myceliophthora thermophila ATCC
42464]
Length = 335
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 141/209 (67%), Gaps = 7/209 (3%)
Query: 80 GLVELSRTFSSGYDTDS-----DLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAG 132
G + SR S+G T++ + V +K+ ++GD QIGKTS VKYV G+ E +Q G
Sbjct: 122 GADQASRAGSNGPQTEAQNPGRNHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLG 181
Query: 133 LNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGW 192
+N + KT+ ++ I FSIWD+GG + +P+ C DAVAILFMFDLT + TLNSI W
Sbjct: 182 VNFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEW 241
Query: 193 YSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINV 252
Y + R +N+TAIP+L+GTK+D FV L + Q I+ QAR +AKAM+A+L FSS +H+INV
Sbjct: 242 YRQGRGFNKTAIPVLVGTKYDHFVNLSREEQEEISNQARRFAKAMRASLIFSSTSHSINV 301
Query: 253 NKIFKFIMAKLFNLPWTVKRNLTIGEPII 281
KIFK +++K F+L T+ +GEP++
Sbjct: 302 QKIFKIVLSKAFDLKCTIPEITNVGEPLL 330
>gi|238490670|ref|XP_002376572.1| GTP binding protein (SPG1), putative [Aspergillus flavus NRRL3357]
gi|317145506|ref|XP_001820848.2| GTP-binding protein (SPG1) [Aspergillus oryzae RIB40]
gi|220696985|gb|EED53326.1| GTP binding protein (SPG1), putative [Aspergillus flavus NRRL3357]
gi|391865592|gb|EIT74871.1| Ras GTPase [Aspergillus oryzae 3.042]
Length = 305
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 110/251 (43%), Positives = 153/251 (60%), Gaps = 26/251 (10%)
Query: 56 AVRYQKLTR--RSSSESSPAPDTM-EAGLVELSRTFSSGY-------DTDSDL------- 98
AV Y TR +S ++ P+P + + + LSR SSG T D+
Sbjct: 51 AVEYHSPTRDYQSHDDTRPSPSPLTQTQIPSLSRP-SSGLSSAPGISQTSQDVSQKQPSQ 109
Query: 99 ------VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFS 150
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FS
Sbjct: 110 QQTKNSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFS 169
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGT 210
IWD+GG + +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GT
Sbjct: 170 IWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGT 229
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTV 270
K+D FV P + Q I+ QA+ +AKAMKA+L FSS +H+INV KIFK ++AK F+L T+
Sbjct: 230 KYDHFVNFPREDQEEISVQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLKCTI 289
Query: 271 KRNLTIGEPII 281
+GEP++
Sbjct: 290 PEIENVGEPLL 300
>gi|255956441|ref|XP_002568973.1| Pc21g19820 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590684|emb|CAP96879.1| Pc21g19820 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 370
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 139/208 (66%), Gaps = 5/208 (2%)
Query: 79 AGLVELSRTFSS---GYDTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGL 133
AG+ +L + +S + + V +K+ ++GD QIGKTS VKYV G+ E +Q G+
Sbjct: 158 AGVSQLQQQDASQRQASQANKNSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGV 217
Query: 134 NLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWY 193
N + KT+ ++ I FSIWD+GG + +P+ C DAVAILFMFDLT + TLNSI WY
Sbjct: 218 NFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWY 277
Query: 194 SEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVN 253
+ R +N+TAIP L+GTK+D FV P + Q I+ QA+ +AKAMKA+L FSS +H+INV
Sbjct: 278 RQGRGFNKTAIPFLVGTKYDHFVNFPREDQEEISIQAKRFAKAMKASLIFSSTSHSINVQ 337
Query: 254 KIFKFIMAKLFNLPWTVKRNLTIGEPII 281
KIFK ++AK F+L T+ IGEP++
Sbjct: 338 KIFKIVLAKAFDLKCTIPEIENIGEPLL 365
>gi|402081349|gb|EJT76494.1| septum-promoting GTP-binding protein 1 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 332
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/195 (49%), Positives = 132/195 (67%), Gaps = 2/195 (1%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGAR 146
SS D V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++
Sbjct: 133 SSARDNGRSHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTE 192
Query: 147 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 206
I FSIWD+GG + +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIPI
Sbjct: 193 ITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPI 252
Query: 207 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
L+GTK+D FV P + Q I+ QAR +AKAM+A L FSS +H+INV KIFK +++K F+L
Sbjct: 253 LVGTKYDHFVNFPREDQEEISNQARRFAKAMRAALIFSSTSHSINVQKIFKIVLSKAFDL 312
Query: 267 PWTVKRNLTIGEPII 281
T+ +GEP++
Sbjct: 313 KCTIPEIENVGEPLL 327
>gi|296423250|ref|XP_002841168.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637402|emb|CAZ85359.1| unnamed protein product [Tuber melanosporum]
Length = 300
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 137/208 (65%), Gaps = 5/208 (2%)
Query: 79 AGLVELSRTFSSGYDTD---SDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGL 133
AG + SG D + V +K+ ++GD QIGKTS VKYV G+ E +Q G+
Sbjct: 88 AGTTPTQAHYGSGGAVDLGKRNSVVIKVGMVGDAQIGKTSLMVKYVEGSFDEDYIQTLGV 147
Query: 134 NLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWY 193
N + KT+ ++ I FSIWD+GG + +P+ C DAVAILFMFDLT + TLNSI WY
Sbjct: 148 NFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWY 207
Query: 194 SEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVN 253
+AR +N+TAIP L+GTK+D FV P + Q I+ QAR +A+AMKA+L FSS +H+INV
Sbjct: 208 RQARGFNKTAIPFLVGTKYDHFVNFPREDQEEISKQARKFARAMKASLIFSSTSHSINVQ 267
Query: 254 KIFKFIMAKLFNLPWTVKRNLTIGEPII 281
KIFK +++K F+L T+ +GEP++
Sbjct: 268 KIFKIVLSKAFDLKCTIPEIEHVGEPLL 295
>gi|66802470|ref|XP_635107.1| small GTPase [Dictyostelium discoideum AX4]
gi|60463433|gb|EAL61618.1| small GTPase [Dictyostelium discoideum AX4]
Length = 203
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 134/198 (67%), Gaps = 2/198 (1%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGA 145
F+ DT + V +K+ ++GD QIGKTS VKYV G E +Q G+N + KT+ ++G
Sbjct: 6 FTGSSDTKKNNVVVKVGMVGDSQIGKTSLMVKYVEGTFDEDYIQTLGVNFMEKTISIRGT 65
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP 205
I FSIWD+GG + +P+ C DAVAILFMFDL+ + TLNS+ WY +AR +N+TAIP
Sbjct: 66 EITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIP 125
Query: 206 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
LIGTKFD F P + Q I QAR +A AMK+ L F S +H+INV KIFK +++K F+
Sbjct: 126 FLIGTKFDVFATKPIEEQEEITKQARKFASAMKSPLIFCSTSHSINVQKIFKIVISKAFD 185
Query: 266 LPWTVKRNLTIGEPIIDF 283
L T+ + + +GEP++++
Sbjct: 186 LNCTIPKVVGVGEPLLEY 203
>gi|425777708|gb|EKV15865.1| GTP binding protein (SPG1), putative [Penicillium digitatum Pd1]
Length = 362
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 173 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 232
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D FV
Sbjct: 233 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 292
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QA+ +AKAMKA+L FSS +H+INV KIFK ++AK F+L T+ +
Sbjct: 293 NFPREDQEEISIQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLKCTIPEIENV 352
Query: 277 GEPII 281
GEP++
Sbjct: 353 GEPLL 357
>gi|242761774|ref|XP_002340246.1| GTP binding protein (SPG1), putative [Talaromyces stipitatus ATCC
10500]
gi|242761779|ref|XP_002340247.1| GTP binding protein (SPG1), putative [Talaromyces stipitatus ATCC
10500]
gi|218723442|gb|EED22859.1| GTP binding protein (SPG1), putative [Talaromyces stipitatus ATCC
10500]
gi|218723443|gb|EED22860.1| GTP binding protein (SPG1), putative [Talaromyces stipitatus ATCC
10500]
Length = 336
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 147 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 206
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP LIGTK+D FV
Sbjct: 207 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKYDHFV 266
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QA+ YAKAM+A+L FSS +H+INV KIFK +++K F+L T+ I
Sbjct: 267 NFPREDQEEISLQAKRYAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENI 326
Query: 277 GEPII 281
GEP++
Sbjct: 327 GEPLL 331
>gi|425780032|gb|EKV18055.1| GTP binding protein (SPG1), putative [Penicillium digitatum PHI26]
Length = 362
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 173 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 232
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D FV
Sbjct: 233 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 292
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QA+ +AKAMKA+L FSS +H+INV KIFK ++AK F+L T+ +
Sbjct: 293 NFPREDQEEISIQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLKCTIPEIENV 352
Query: 277 GEPII 281
GEP++
Sbjct: 353 GEPLL 357
>gi|213407448|ref|XP_002174495.1| GTPase Spg1 [Schizosaccharomyces japonicus yFS275]
gi|212002542|gb|EEB08202.1| GTPase Spg1 [Schizosaccharomyces japonicus yFS275]
Length = 198
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 131/187 (70%), Gaps = 2/187 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V++K+ ++GD IGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 9 VTIKLGMVGDSSIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 68
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDL+ + TLNSI WY +AR +N+TA+PILIGTK+D FV
Sbjct: 69 QREFVNMLPLVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAVPILIGTKYDYFV 128
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L + Q I QAR YAK MKA+L F S +H+INV KIFK ++AK+F+L T+ +
Sbjct: 129 GLSREDQEEITKQARRYAKVMKASLVFCSTSHSINVQKIFKIVLAKVFDLKCTIPEITAV 188
Query: 277 GEPIIDF 283
GEPI+++
Sbjct: 189 GEPILEY 195
>gi|328877042|gb|EGG25405.1| small GTPase [Dictyostelium fasciculatum]
Length = 204
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/193 (48%), Positives = 133/193 (68%), Gaps = 2/193 (1%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFS 150
D+ + V +K+ ++GD QIGKTS VKYV G E +Q G+N + KT+ ++G I FS
Sbjct: 12 DSKKNNVVVKVGMVGDSQIGKTSLMVKYVEGTFDEDYIQTLGVNFMEKTISIRGTEITFS 71
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGT 210
IWD+GG + +P+ C DAVAILFMFDL+ + TLNS+ WY +AR +N+TAIP LIGT
Sbjct: 72 IWDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGT 131
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTV 270
K+D F LP + Q I QAR +A AMK+ L F S +H+INV KIFK +++K F+L T+
Sbjct: 132 KYDVFATLPAEDQEEITKQARKFASAMKSPLIFCSTSHSINVQKIFKIVISKAFDLNCTI 191
Query: 271 KRNLTIGEPIIDF 283
+ + IGEP++++
Sbjct: 192 PKIINIGEPLLEY 204
>gi|212529950|ref|XP_002145132.1| GTP binding protein (SPG1), putative [Talaromyces marneffei ATCC
18224]
gi|210074530|gb|EEA28617.1| GTP binding protein (SPG1), putative [Talaromyces marneffei ATCC
18224]
Length = 332
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 143 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 202
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP LIGTK+D FV
Sbjct: 203 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKYDHFV 262
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QA+ YAKAM+A+L FSS +H+INV KIFK +++K F+L T+ I
Sbjct: 263 NFPREDQEEISLQAKRYAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENI 322
Query: 277 GEPII 281
GEP++
Sbjct: 323 GEPLL 327
>gi|119174895|ref|XP_001239770.1| hypothetical protein CIMG_09391 [Coccidioides immitis RS]
Length = 239
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 146/233 (62%), Gaps = 11/233 (4%)
Query: 59 YQKLTRRSSSESSPAPDTMEAG--------LVELSRTFSSGYDTDSDLVSLKISLLGDCQ 110
YQ+L + S S P G E + SG + + +V +K+ ++GD Q
Sbjct: 3 YQQLQQVPQSSSRPGSGLSSGGDRYGYSQSHSEQTSRPQSGPPSKNSVV-IKVGMVGDAQ 61
Query: 111 IGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIAC 168
IGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG + +P+ C
Sbjct: 62 IGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVC 121
Query: 169 KDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIAT 228
DAVAILFMFDLT + TLNSI WY + R +N+TAIP+L+GTK+D FV P + Q I+
Sbjct: 122 NDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPLLVGTKYDHFVNFPREDQEEISI 181
Query: 229 QARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPII 281
QA+ +AKAM+A+L FSS +H+INV KIFK +++K F+L T+ IGEP++
Sbjct: 182 QAKRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENIGEPLL 234
>gi|398407789|ref|XP_003855360.1| hypothetical protein MYCGRDRAFT_55813, partial [Zymoseptoria
tritici IPO323]
gi|339475244|gb|EGP90336.1| hypothetical protein MYCGRDRAFT_55813 [Zymoseptoria tritici IPO323]
Length = 287
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/244 (43%), Positives = 151/244 (61%), Gaps = 15/244 (6%)
Query: 53 KQPAVRYQK--LTRRSSSESSPAPDTMEAG--LVELSRTFSSG-YDTDSDL--------V 99
++P+ Y TR S S PD +++G + T S G +D + V
Sbjct: 41 QRPSTSYSDTGFTRPFSESQSGTPDNVQSGNGISRPPSTQSQGQFDQNGQRQQAQKNASV 100
Query: 100 SLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
+K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 101 VIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQ 160
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVR 217
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D FV
Sbjct: 161 REFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFVN 220
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIG 277
P + Q I+ QA+ +AKAMKA+L FSS +H+INV KIFK +++K F+L T+ +G
Sbjct: 221 FPREEQEEISMQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLSKAFDLRCTIPEIEHVG 280
Query: 278 EPII 281
EP++
Sbjct: 281 EPLL 284
>gi|452845079|gb|EME47012.1| hypothetical protein DOTSEDRAFT_69106 [Dothistroma septosporum
NZE10]
Length = 281
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 130/185 (70%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 92 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 151
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D FV
Sbjct: 152 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 211
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+TQA+ +AKAMKA+L FSS +H+INV KIFK +++K F+L T+ +
Sbjct: 212 NFPREEQEEISTQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLSKAFDLRCTIPEIENV 271
Query: 277 GEPII 281
GEP++
Sbjct: 272 GEPLL 276
>gi|317032148|ref|XP_001394138.2| GTP-binding protein (SPG1) [Aspergillus niger CBS 513.88]
Length = 311
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 122 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 181
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP LIGTK+D FV
Sbjct: 182 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKYDHFV 241
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QA+ +AKAMKA+L FSS +H+INV KIFK ++AK F+L T+ +
Sbjct: 242 NFPREDQEEISIQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLKCTIPEIENV 301
Query: 277 GEPII 281
GEP++
Sbjct: 302 GEPLL 306
>gi|119471324|ref|XP_001258159.1| GTP binding protein (SPG1), putative [Neosartorya fischeri NRRL
181]
gi|119406311|gb|EAW16262.1| GTP binding protein (SPG1), putative [Neosartorya fischeri NRRL
181]
Length = 319
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 130 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 189
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D FV
Sbjct: 190 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 249
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QA+ +AKAMKA+L FSS +H+INV KIFK ++AK F+L T+ I
Sbjct: 250 NFPREDQEEISIQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLKCTIPEIENI 309
Query: 277 GEPII 281
GEP++
Sbjct: 310 GEPLL 314
>gi|121699736|ref|XP_001268133.1| GTP binding protein (SPG1), putative [Aspergillus clavatus NRRL 1]
gi|119396275|gb|EAW06707.1| GTP binding protein (SPG1), putative [Aspergillus clavatus NRRL 1]
Length = 319
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 130 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 189
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D FV
Sbjct: 190 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 249
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QA+ +AKAMKA+L FSS +H+INV KIFK ++AK F+L T+ +
Sbjct: 250 NFPREDQEEISIQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLKCTIPEIENV 309
Query: 277 GEPII 281
GEP++
Sbjct: 310 GEPLL 314
>gi|367037751|ref|XP_003649256.1| hypothetical protein THITE_2107730 [Thielavia terrestris NRRL 8126]
gi|346996517|gb|AEO62920.1| hypothetical protein THITE_2107730 [Thielavia terrestris NRRL 8126]
Length = 340
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 138/209 (66%), Gaps = 7/209 (3%)
Query: 80 GLVELSRTFSSGYDTDS-----DLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAG 132
G + SR S+G + + V +K+ ++GD QIGKTS VKYV G+ E +Q G
Sbjct: 127 GADQASRAGSNGAPAEQQNPGRNHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLG 186
Query: 133 LNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGW 192
+N + KT+ ++ I FSIWD+GG + +P+ C DAVAILFMFDLT + TLNSI W
Sbjct: 187 VNFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEW 246
Query: 193 YSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINV 252
Y + R +N+TAIP+L+GTK+D FV L + Q I+ QAR +AKAM+A L FSS +H+INV
Sbjct: 247 YRQGRGFNKTAIPVLVGTKYDHFVNLSREEQEEISNQARRFAKAMRAALIFSSTSHSINV 306
Query: 253 NKIFKFIMAKLFNLPWTVKRNLTIGEPII 281
KIFK ++AK F+L T+ +GEP++
Sbjct: 307 QKIFKIVLAKAFDLKCTIPEITNVGEPLL 335
>gi|330802506|ref|XP_003289257.1| spg1, Ras superfamily GTPase [Dictyostelium purpureum]
gi|325080659|gb|EGC34205.1| spg1, Ras superfamily GTPase [Dictyostelium purpureum]
Length = 203
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/198 (47%), Positives = 133/198 (67%), Gaps = 2/198 (1%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGA 145
F+ D + V +K+ ++GD QIGKTS VKYV G E +Q G+N + KT+ ++G
Sbjct: 6 FTGSADAKKNNVVVKVGMVGDSQIGKTSLMVKYVEGTFDEDYIQTLGVNFMEKTISIRGT 65
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP 205
I FSIWD+GG + +P+ C DAVAILFMFDL+ + TLNS+ WY +AR +N+TAIP
Sbjct: 66 EITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIP 125
Query: 206 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
LIGTKFD F P + Q I QAR +A AMK+ L F S +H+INV KIFK +++K F+
Sbjct: 126 FLIGTKFDVFATKPIEEQEEITKQARKFASAMKSPLIFCSTSHSINVQKIFKIVISKAFD 185
Query: 266 LPWTVKRNLTIGEPIIDF 283
L T+ + + +GEP++++
Sbjct: 186 LNCTIPKVVNVGEPLLEY 203
>gi|134078809|emb|CAK45868.1| unnamed protein product [Aspergillus niger]
Length = 214
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 25 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 84
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP LIGTK+D FV
Sbjct: 85 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKYDHFV 144
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QA+ +AKAMKA+L FSS +H+INV KIFK ++AK F+L T+ +
Sbjct: 145 NFPREDQEEISIQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLKCTIPEIENV 204
Query: 277 GEPII 281
GEP++
Sbjct: 205 GEPLL 209
>gi|451851765|gb|EMD65063.1| hypothetical protein COCSADRAFT_116415 [Cochliobolus sativus
ND90Pr]
Length = 368
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 179 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 238
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D FV
Sbjct: 239 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 298
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QA+ +A+AMKA+L FSS +H+INV KIFK +++K F+L T+ I
Sbjct: 299 NFPREEQEEISNQAKRFARAMKASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENI 358
Query: 277 GEPII 281
GEP++
Sbjct: 359 GEPLL 363
>gi|358392743|gb|EHK42147.1| hypothetical protein TRIATDRAFT_29072 [Trichoderma atroviride IMI
206040]
Length = 272
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 143/229 (62%), Gaps = 7/229 (3%)
Query: 55 PAVRYQKLTRRSSSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKT 114
P L+R +S S+PA + R S + V +K+ ++GD QIGKT
Sbjct: 44 PVGGPSSLSRPASGLSNPAAPSYND-----YRPSSGDQSNGRNHVVIKVGMVGDAQIGKT 98
Query: 115 SF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAV 172
S VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG + +P+ C DAV
Sbjct: 99 SLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVCNDAV 158
Query: 173 AILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARA 232
AILFMFDLT + TLNSI WY + R +N+TAIP+L+GTK+D FV P Q I+ QAR
Sbjct: 159 AILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPVLVGTKYDHFVNFPIQDQEEISNQARR 218
Query: 233 YAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPII 281
+AKAM+A+L FSS +H+INV KIFK +++K F+L T+ +GEP++
Sbjct: 219 FAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENVGEPLL 267
>gi|406866836|gb|EKD19875.1| septum-promoting GTP-binding protein 1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 324
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 135/199 (67%), Gaps = 2/199 (1%)
Query: 85 SRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMV 142
+R S+ + + V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ +
Sbjct: 121 ARGASTDQSRNKNSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISI 180
Query: 143 QGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQT 202
+ I FSIWD+GG + +P+ C DAVAILFMFDLT + TLNSI WY + R +N+T
Sbjct: 181 RNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKT 240
Query: 203 AIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAK 262
AIP L+GTK+D FV P + Q I+ QAR +AKAM+A+L FSS +H+INV KIFK +++K
Sbjct: 241 AIPFLVGTKYDHFVNFPREDQEEISNQARRFAKAMRASLIFSSTSHSINVQKIFKIVLSK 300
Query: 263 LFNLPWTVKRNLTIGEPII 281
F+L T+ +GEP++
Sbjct: 301 AFDLKCTIPEIENVGEPLL 319
>gi|83768709|dbj|BAE58846.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 200
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 11 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 70
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D FV
Sbjct: 71 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 130
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QA+ +AKAMKA+L FSS +H+INV KIFK ++AK F+L T+ +
Sbjct: 131 NFPREDQEEISVQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLKCTIPEIENV 190
Query: 277 GEPII 281
GEP++
Sbjct: 191 GEPLL 195
>gi|451995428|gb|EMD87896.1| hypothetical protein COCHEDRAFT_1182963 [Cochliobolus
heterostrophus C5]
Length = 368
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 179 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 238
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D FV
Sbjct: 239 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 298
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QA+ +A+AMKA+L FSS +H+INV KIFK +++K F+L T+ I
Sbjct: 299 NFPREEQEEISNQAKRFARAMKASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENI 358
Query: 277 GEPII 281
GEP++
Sbjct: 359 GEPLL 363
>gi|440639791|gb|ELR09710.1| hypothetical protein GMDG_04196 [Geomyces destructans 20631-21]
Length = 332
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 135/199 (67%), Gaps = 2/199 (1%)
Query: 85 SRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMV 142
S T ++ + + V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ +
Sbjct: 128 SSTAATDTGRNKNSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISI 187
Query: 143 QGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQT 202
+ I FSIWD+GG + +P+ C DAVAILFMFDLT + TLNSI WY + R +N+T
Sbjct: 188 RNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKT 247
Query: 203 AIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAK 262
AIP L+GTK+D FV P + Q I+ QAR +AKAM+A+L FSS +H+INV KIFK +++K
Sbjct: 248 AIPFLVGTKYDHFVNFPREDQEEISNQARRFAKAMRASLIFSSTSHSINVQKIFKIVLSK 307
Query: 263 LFNLPWTVKRNLTIGEPII 281
F+L T+ IGEP++
Sbjct: 308 AFDLKCTIPEIENIGEPLL 326
>gi|380477690|emb|CCF44012.1| hypothetical protein CH063_03212 [Colletotrichum higginsianum]
Length = 302
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 113 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 172
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIPIL+GTK+D FV
Sbjct: 173 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDHFV 232
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QAR +AKAM+A L FSS +H+INV KIFK +++K F+L T+ +
Sbjct: 233 NFPREDQEEISNQARRFAKAMRAALIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENV 292
Query: 277 GEPII 281
GEP++
Sbjct: 293 GEPLL 297
>gi|2408103|emb|CAA04846.1| sid3 [Schizosaccharomyces pombe]
Length = 199
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 134/194 (69%), Gaps = 3/194 (1%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQ-MAGLNLINKTLMVQGARIAF 149
D + V++K+ ++GD IGKTS V YV G+ E S Q + G+N + KT+ ++ I F
Sbjct: 3 DARKNNVTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLVGVNFMEKTISIRNTEITF 62
Query: 150 SIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIG 209
SIWD+GG + +P+ C DAVAILFMFDL+ + TLNSI WY +AR +N+TA+PILIG
Sbjct: 63 SIWDLGGQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAVPILIG 122
Query: 210 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWT 269
TK+D F+ P + Q I QAR YAKAMKA+L F S +H+INV KIFK ++AK+F+L T
Sbjct: 123 TKYDHFMTFPREDQEEITKQARRYAKAMKASLVFCSTSHSINVQKIFKIVLAKVFDLKCT 182
Query: 270 VKRNLTIGEPIIDF 283
+ +G+PI+++
Sbjct: 183 IPEIKNVGDPILEY 196
>gi|281202275|gb|EFA76480.1| small GTPase [Polysphondylium pallidum PN500]
Length = 204
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/193 (48%), Positives = 132/193 (68%), Gaps = 2/193 (1%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFS 150
D+ + V +K+ ++GD QIGKTS VKYV G E +Q G+N + KT+ ++G I FS
Sbjct: 12 DSKKNNVVVKVGMVGDSQIGKTSLMVKYVEGTFDEDYIQTLGVNFMEKTISIRGTEITFS 71
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGT 210
IWD+GG + +P+ C DAVAILFMFDL+ + TLNS+ WY +AR +N+TAIP LIGT
Sbjct: 72 IWDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGT 131
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTV 270
K+D F LP + Q I QAR +A AMK+ L F S +H+INV KIFK +++K F+L T+
Sbjct: 132 KYDVFATLPAEDQEEITKQARKFASAMKSPLIFCSTSHSINVQKIFKIVISKAFDLNCTI 191
Query: 271 KRNLTIGEPIIDF 283
+ +GEP++++
Sbjct: 192 PKITNVGEPLLEY 204
>gi|340959762|gb|EGS20943.1| putative GTP binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 310
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 130/185 (70%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 121 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 180
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP+L+GTK+D FV
Sbjct: 181 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPVLVGTKYDHFV 240
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L + Q I+ QAR +AKAM+A+L FSS +H+INV KIFK +++K F+L T+ +
Sbjct: 241 NLSREEQEEISNQARRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEITNV 300
Query: 277 GEPII 281
GEP++
Sbjct: 301 GEPLL 305
>gi|310794332|gb|EFQ29793.1| hypothetical protein GLRG_04937 [Glomerella graminicola M1.001]
Length = 302
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 113 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 172
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIPIL+GTK+D FV
Sbjct: 173 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDHFV 232
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QAR +AKAM+A L FSS +H+INV KIFK +++K F+L T+ +
Sbjct: 233 NFPREDQEEISNQARRFAKAMRAALIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENV 292
Query: 277 GEPII 281
GEP++
Sbjct: 293 GEPLL 297
>gi|240274719|gb|EER38235.1| septum-promoting GTP-binding protein [Ajellomyces capsulatus H143]
gi|325091055|gb|EGC44365.1| septum-promoting GTP-binding protein [Ajellomyces capsulatus H88]
Length = 373
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 183 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 242
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP LIGTK+D FV
Sbjct: 243 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKYDHFV 302
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QA+ +AKAM+A+L FSS +H+INV KIFK +++K F+L T+ I
Sbjct: 303 NFPREDQEEISIQAKRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENI 362
Query: 277 GEPII 281
GEP++
Sbjct: 363 GEPLL 367
>gi|164423258|ref|XP_960671.2| protein TEM1 [Neurospora crassa OR74A]
gi|157070013|gb|EAA31435.2| protein TEM1 [Neurospora crassa OR74A]
Length = 282
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 137/203 (67%), Gaps = 6/203 (2%)
Query: 85 SRTFSSGYDTDS----DLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINK 138
SRT + G ++ + V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + K
Sbjct: 75 SRTTAGGSSSEQANGRNHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEK 134
Query: 139 TLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK 198
T+ ++ I FSIWD+GG + +P+ C DAVAILFMFDLT + TLNSI WY + R
Sbjct: 135 TISIRNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRG 194
Query: 199 WNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKF 258
+N+TAIP+L+GTK+D FV L + Q I+ QAR +AKAM+A L FSS +H+INV KIFK
Sbjct: 195 FNKTAIPVLVGTKYDHFVNLSREEQEEISNQARRFAKAMRAALIFSSTSHSINVQKIFKI 254
Query: 259 IMAKLFNLPWTVKRNLTIGEPII 281
+++K F+L T+ +GEP++
Sbjct: 255 VLSKAFDLKCTIPEISNVGEPLL 277
>gi|453086825|gb|EMF14866.1| small GTPase [Mycosphaerella populorum SO2202]
Length = 324
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 135 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 194
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D FV
Sbjct: 195 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 254
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QA+ +AKAMKA+L FSS +H+INV KIFK +++K F+L T+ +
Sbjct: 255 NFPREEQEEISQQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLSKAFDLRCTIPEIENV 314
Query: 277 GEPII 281
GEP++
Sbjct: 315 GEPLL 319
>gi|189199684|ref|XP_001936179.1| septum-promoting GTP-binding protein 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187983278|gb|EDU48766.1| septum-promoting GTP-binding protein 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 357
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 168 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 227
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D FV
Sbjct: 228 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 287
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QA+ +A+AMKA+L FSS +H+INV KIFK +++K F+L T+ I
Sbjct: 288 NFPREEQEEISNQAKRFARAMKASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENI 347
Query: 277 GEPII 281
GEP++
Sbjct: 348 GEPLL 352
>gi|330920338|ref|XP_003298967.1| hypothetical protein PTT_09857 [Pyrenophora teres f. teres 0-1]
gi|311327552|gb|EFQ92935.1| hypothetical protein PTT_09857 [Pyrenophora teres f. teres 0-1]
Length = 357
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 168 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 227
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D FV
Sbjct: 228 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 287
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QA+ +A+AMKA+L FSS +H+INV KIFK +++K F+L T+ I
Sbjct: 288 NFPREEQEEISNQAKRFARAMKASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENI 347
Query: 277 GEPII 281
GEP++
Sbjct: 348 GEPLL 352
>gi|154298912|ref|XP_001549877.1| septum-promoting GTP-binding protein 1 [Botryotinia fuckeliana
B05.10]
gi|347836713|emb|CCD51285.1| similar to septum-promoting GTP-binding protein [Botryotinia
fuckeliana]
Length = 312
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 135/204 (66%), Gaps = 11/204 (5%)
Query: 89 SSGYDTD---------SDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLIN 137
SSG TD + V +K+ ++GD QIGKTS VKYV G+ E +Q G+N +
Sbjct: 103 SSGASTDQQQQQQRGSKNSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFME 162
Query: 138 KTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR 197
KT+ ++ I FSIWD+GG + +P+ C DAVAILFMFDLT + TLNSI WY + R
Sbjct: 163 KTISIRNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGR 222
Query: 198 KWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 257
+N+TAIP L+GTK+D FV P + Q I+ QAR +AKAM+A+L FSS +H+INV KIFK
Sbjct: 223 GFNKTAIPFLVGTKYDHFVNFPREDQEEISNQARRFAKAMRASLIFSSTSHSINVQKIFK 282
Query: 258 FIMAKLFNLPWTVKRNLTIGEPII 281
+++K F+L T+ +GEP++
Sbjct: 283 IVLSKAFDLKCTIPEIENVGEPLL 306
>gi|378726709|gb|EHY53168.1| rab family, other [Exophiala dermatitidis NIH/UT8656]
Length = 297
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 108 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 167
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP LIGTK+D FV
Sbjct: 168 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKYDHFV 227
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QAR +AKAM+A+L FSS +H+INV KIFK +++K F+L T+ +
Sbjct: 228 NFPREDQEEISNQARRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENV 287
Query: 277 GEPII 281
GEP++
Sbjct: 288 GEPLL 292
>gi|336473535|gb|EGO61695.1| hypothetical protein NEUTE1DRAFT_120574 [Neurospora tetrasperma
FGSC 2508]
gi|350293164|gb|EGZ74249.1| small GTPase [Neurospora tetrasperma FGSC 2509]
Length = 314
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 137/203 (67%), Gaps = 6/203 (2%)
Query: 85 SRTFSSGYDTDS----DLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINK 138
SRT + G ++ + V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + K
Sbjct: 107 SRTTAGGSSSEQANGRNHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEK 166
Query: 139 TLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK 198
T+ ++ I FSIWD+GG + +P+ C DAVAILFMFDLT + TLNSI WY + R
Sbjct: 167 TISIRNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRG 226
Query: 199 WNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKF 258
+N+TAIP+L+GTK+D FV L + Q I+ QAR +AKAM+A L FSS +H+INV KIFK
Sbjct: 227 FNKTAIPVLVGTKYDHFVNLSREEQEEISNQARRFAKAMRAALIFSSTSHSINVQKIFKI 286
Query: 259 IMAKLFNLPWTVKRNLTIGEPII 281
+++K F+L T+ +GEP++
Sbjct: 287 VLSKAFDLKCTIPEISNVGEPLL 309
>gi|38566780|emb|CAE76091.1| related to septum initiation protein sid3 [Neurospora crassa]
Length = 314
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 137/203 (67%), Gaps = 6/203 (2%)
Query: 85 SRTFSSGYDTDS----DLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINK 138
SRT + G ++ + V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + K
Sbjct: 107 SRTTAGGSSSEQANGRNHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEK 166
Query: 139 TLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK 198
T+ ++ I FSIWD+GG + +P+ C DAVAILFMFDLT + TLNSI WY + R
Sbjct: 167 TISIRNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRG 226
Query: 199 WNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKF 258
+N+TAIP+L+GTK+D FV L + Q I+ QAR +AKAM+A L FSS +H+INV KIFK
Sbjct: 227 FNKTAIPVLVGTKYDHFVNLSREEQEEISNQARRFAKAMRAALIFSSTSHSINVQKIFKI 286
Query: 259 IMAKLFNLPWTVKRNLTIGEPII 281
+++K F+L T+ +GEP++
Sbjct: 287 VLSKAFDLKCTIPEISNVGEPLL 309
>gi|315042179|ref|XP_003170466.1| septum-promoting GTP-binding protein 1 [Arthroderma gypseum CBS
118893]
gi|311345500|gb|EFR04703.1| septum-promoting GTP-binding protein 1 [Arthroderma gypseum CBS
118893]
Length = 383
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 194 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 253
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D FV
Sbjct: 254 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 313
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QA+ +AKAM+A+L FSS +H+INV KIFK +++K F+L T+ I
Sbjct: 314 NFPREDQEEISIQAKRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENI 373
Query: 277 GEPII 281
GEP++
Sbjct: 374 GEPLL 378
>gi|400599410|gb|EJP67107.1| septum initiation protein sid3 [Beauveria bassiana ARSEF 2860]
Length = 317
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 128/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 128 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 187
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIPIL+GTK+D FV
Sbjct: 188 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDHFV 247
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P Q I+ QAR +AKAM+A L FSS +H+INV KIFK +++K F+L T+ +
Sbjct: 248 NFPIQDQEEISNQARRFAKAMRAALIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENV 307
Query: 277 GEPII 281
GEP++
Sbjct: 308 GEPLL 312
>gi|326473461|gb|EGD97470.1| GTP binding protein [Trichophyton tonsurans CBS 112818]
gi|326480315|gb|EGE04325.1| septum-promoting GTP-binding protein 1 [Trichophyton equinum CBS
127.97]
Length = 401
Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 212 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 271
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D FV
Sbjct: 272 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 331
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QA+ +AKAM+A+L FSS +H+INV KIFK +++K F+L T+ I
Sbjct: 332 NFPREDQEEISIQAKRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENI 391
Query: 277 GEPII 281
GEP++
Sbjct: 392 GEPLL 396
>gi|327300210|ref|XP_003234798.1| septum-promoting GTP-binding protein 1 [Trichophyton rubrum CBS
118892]
gi|326463692|gb|EGD89145.1| septum-promoting GTP-binding protein 1 [Trichophyton rubrum CBS
118892]
Length = 405
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 216 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 275
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D FV
Sbjct: 276 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 335
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QA+ +AKAM+A+L FSS +H+INV KIFK +++K F+L T+ I
Sbjct: 336 NFPREDQEEISIQAKRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENI 395
Query: 277 GEPII 281
GEP++
Sbjct: 396 GEPLL 400
>gi|356517630|ref|XP_003527490.1| PREDICTED: septum-promoting GTP-binding protein 1-like [Glycine
max]
Length = 107
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/107 (83%), Positives = 99/107 (92%)
Query: 177 MFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKA 236
MFDLTSR TLNS+VGWY EARKWNQTAIP+LIGTKFDDF++LP DLQWTIA +AR YAKA
Sbjct: 1 MFDLTSRRTLNSVVGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDLQWTIANEARKYAKA 60
Query: 237 MKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
+ ATLFFSSAT+NINVNKIFKFI AKLF+LPWTV+RNL +GEPIIDF
Sbjct: 61 LNATLFFSSATYNINVNKIFKFITAKLFDLPWTVERNLPVGEPIIDF 107
>gi|225684530|gb|EEH22814.1| septum-promoting GTP-binding protein [Paracoccidioides brasiliensis
Pb03]
Length = 244
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 54 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 113
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP LIGTK+D FV
Sbjct: 114 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKYDHFV 173
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QA+ +AKAM+A+L FSS +H+INV KIFK +++K F+L T+ I
Sbjct: 174 NFPREDQEEISIQAKRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENI 233
Query: 277 GEPII 281
GEP++
Sbjct: 234 GEPLL 238
>gi|407923827|gb|EKG16890.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 347
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 157 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 216
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D FV
Sbjct: 217 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 276
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QA+ +AKAMKA+L FSS +H+INV KIFK +++K F+L T+ +
Sbjct: 277 NFPREEQEEISNQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLSKAFDLRCTIPEIENV 336
Query: 277 GEPII 281
GEP++
Sbjct: 337 GEPLL 341
>gi|346318179|gb|EGX87783.1| protein TEM1 [Cordyceps militaris CM01]
Length = 443
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 128/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 254 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 313
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIPIL+GTK+D FV
Sbjct: 314 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDHFV 373
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P Q I+ QAR +AKAM+A L FSS +H+INV KIFK +++K F+L T+ +
Sbjct: 374 NFPIQDQEEISNQARRFAKAMRAALIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENV 433
Query: 277 GEPII 281
GEP++
Sbjct: 434 GEPLL 438
>gi|336263093|ref|XP_003346328.1| hypothetical protein SMAC_07977 [Sordaria macrospora k-hell]
gi|380088074|emb|CCC13907.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 315
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 126 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 185
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP+L+GTK+D FV
Sbjct: 186 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPVLVGTKYDHFV 245
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L + Q I+ QAR +AKAM+A L FSS +H+INV KIFK +++K F+L T+ +
Sbjct: 246 NLSREEQEEISNQARRFAKAMRAALIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEISNV 305
Query: 277 GEPII 281
GEP++
Sbjct: 306 GEPLL 310
>gi|452985901|gb|EME85657.1| hypothetical protein MYCFIDRAFT_130727 [Pseudocercospora fijiensis
CIRAD86]
Length = 223
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 34 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 93
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D FV
Sbjct: 94 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 153
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QA+ +AKAMKA+L FSS +H+INV KIFK +++K F+L T+ +
Sbjct: 154 NFPREEQEEISLQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLSKAFDLRCTIPEIENV 213
Query: 277 GEPII 281
GEP++
Sbjct: 214 GEPLL 218
>gi|327352093|gb|EGE80950.1| septum-promoting GTP-binding protein 1 [Ajellomyces dermatitidis
ATCC 18188]
Length = 366
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 176 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 235
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP LIGTK+D FV
Sbjct: 236 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKYDHFV 295
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ QA+ +A+AM+A+L FSS +H+INV KIFK +++K F+L T+ I
Sbjct: 296 NFPREDQEEISIQAKRFARAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENI 355
Query: 277 GEPII 281
GEP++
Sbjct: 356 GEPLL 360
>gi|448089001|ref|XP_004196690.1| Piso0_003915 [Millerozyma farinosa CBS 7064]
gi|448093180|ref|XP_004197721.1| Piso0_003915 [Millerozyma farinosa CBS 7064]
gi|359378112|emb|CCE84371.1| Piso0_003915 [Millerozyma farinosa CBS 7064]
gi|359379143|emb|CCE83340.1| Piso0_003915 [Millerozyma farinosa CBS 7064]
Length = 217
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 132/199 (66%), Gaps = 2/199 (1%)
Query: 85 SRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMV 142
+ T +S DT+ D V+LKI L+GD QIGKTS VKYV G+ E +Q G+N ++K + +
Sbjct: 16 ASTMASTQDTNRDRVALKIGLIGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMDKKIQI 75
Query: 143 QGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQT 202
+ I FSIWD+GG + +P+ DAVAILFMFDLT + TLNSI WY + R +N+T
Sbjct: 76 KNTVITFSIWDLGGQKEFINMLPLVSNDAVAILFMFDLTRKSTLNSIKEWYRQVRGFNKT 135
Query: 203 AIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAK 262
AIP L+GTK+D F+ L Q+ I QA+ Y AMKA + F S +H+INV KIFK I++K
Sbjct: 136 AIPFLVGTKYDQFIDLSHQDQYEITQQAKKYGSAMKAPVIFCSTSHSINVQKIFKIILSK 195
Query: 263 LFNLPWTVKRNLTIGEPII 281
F+L + + +GEPI+
Sbjct: 196 AFDLRLNLDEIVNVGEPIL 214
>gi|345570601|gb|EGX53422.1| hypothetical protein AOL_s00006g288 [Arthrobotrys oligospora ATCC
24927]
Length = 280
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 128/185 (69%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 86 VVIKVGMVGDAQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 145
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R N+TAIP LIGTK+D FV
Sbjct: 146 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGLNKTAIPFLIGTKYDHFV 205
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L + Q I+ QA+ +A+AMKA+L FSS +H+INV KIFK +++K F+L T+ +
Sbjct: 206 NLSKEDQEEISKQAKRFARAMKASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENV 265
Query: 277 GEPII 281
G+P++
Sbjct: 266 GDPLL 270
>gi|302773247|ref|XP_002970041.1| SPG1, ras family GTPase [Selaginella moellendorffii]
gi|300162552|gb|EFJ29165.1| SPG1, ras family GTPase [Selaginella moellendorffii]
Length = 265
Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 127/193 (65%), Gaps = 1/193 (0%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERSL-QMAGLNLINKTLMVQGARIA 148
S D D V LK++ +GDC+ GKTSF+ E+ Q G+ L K L ++ A+I
Sbjct: 71 SKADRSEDAVVLKVATVGDCESGKTSFLVSKSELSEKDYAQTLGVALREKCLRIKNAKIV 130
Query: 149 FSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI 208
FSIW++GGD D +P C+ A A++FMFDLT R TL S+ W+ ++RK N AIPIL+
Sbjct: 131 FSIWELGGDRLFEDLLPSVCEGAAAVIFMFDLTKRSTLKSVKEWFIKSRKINNCAIPILV 190
Query: 209 GTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPW 268
G+K+D F+ P D+Q I QA YA+ M A+LFFSS THNIN++KIFK I+AK+F+L
Sbjct: 191 GSKYDQFIYFPQDIQVAITKQAMFYAETMGASLFFSSTTHNINIHKIFKIIVAKVFDLRC 250
Query: 269 TVKRNLTIGEPII 281
+ RN +GEP++
Sbjct: 251 NISRNYNLGEPVV 263
>gi|302807002|ref|XP_002985232.1| SPG1, ras family GTPase [Selaginella moellendorffii]
gi|300147060|gb|EFJ13726.1| SPG1, ras family GTPase [Selaginella moellendorffii]
Length = 265
Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 127/190 (66%), Gaps = 1/190 (0%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSI 151
D D V LK++ +GDC+ GKTSF+ E+ +Q G+ L K L ++ A+I FSI
Sbjct: 74 DRSEDAVVLKVATVGDCESGKTSFLVSKSELSEKDYVQTLGVALREKCLRIKNAKIVFSI 133
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTK 211
W++GGD D +P C+ A A++FMFDLT R TL S+ W+ ++RK N AIP+L+G+K
Sbjct: 134 WELGGDRLFEDLLPSVCEGAAAVIFMFDLTKRSTLKSVKEWFIKSRKINNCAIPVLVGSK 193
Query: 212 FDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVK 271
+D F+ P D+Q I QA YA+ M A+LFFSS THNIN++KIFK I+AK+F+L +
Sbjct: 194 YDQFIYFPQDIQVAITKQAMFYAETMGASLFFSSTTHNINIHKIFKIIVAKVFDLRCNIS 253
Query: 272 RNLTIGEPII 281
RN +GEP++
Sbjct: 254 RNYNLGEPVV 263
>gi|302410263|ref|XP_003002965.1| septum-promoting GTP-binding protein [Verticillium albo-atrum
VaMs.102]
gi|261357989|gb|EEY20417.1| septum-promoting GTP-binding protein [Verticillium albo-atrum
VaMs.102]
Length = 184
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 125/179 (69%), Gaps = 2/179 (1%)
Query: 105 LLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFD 162
++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG +
Sbjct: 1 MVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVN 60
Query: 163 HVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDL 222
+P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIPIL+GTK+D FV P +
Sbjct: 61 MLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDHFVNFPRED 120
Query: 223 QWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPII 281
Q I+ QAR +AKAM+A L FSS +H+INV KIFK +++K F+L T+ +GEP++
Sbjct: 121 QEEISNQARRFAKAMRAALIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENVGEPLL 179
>gi|340519186|gb|EGR49425.1| ras small GTPase [Trichoderma reesei QM6a]
Length = 184
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 126/179 (70%), Gaps = 2/179 (1%)
Query: 105 LLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFD 162
++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG +
Sbjct: 1 MVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVN 60
Query: 163 HVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDL 222
+P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP+L+GTK+D FV P
Sbjct: 61 MLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPVLVGTKYDHFVNFPIQD 120
Query: 223 QWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPII 281
Q I++QAR +AKAM+A+L FSS +H+INV KIFK +++K F+L T+ +GEP++
Sbjct: 121 QEEISSQARRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENVGEPLL 179
>gi|302756715|ref|XP_002961781.1| SPG1, ras family GTPase [Selaginella moellendorffii]
gi|300170440|gb|EFJ37041.1| SPG1, ras family GTPase [Selaginella moellendorffii]
Length = 306
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 145/227 (63%), Gaps = 12/227 (5%)
Query: 59 YQKLTRRSSSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVK 118
+ T + S P+ D E+ ++++ G DT V +K+ ++GDCQ GKTS ++
Sbjct: 90 FPHATAHAPKPSQPSDDVHESCGLKVAY----GEDT----VVVKVGIVGDCQTGKTSLMQ 141
Query: 119 --YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILF 176
VG+ + G+N ++K L + A+IA SIW++GG +S VP C DA AIL
Sbjct: 142 NYVVGDRSNGDESIFGVNAMDKVLDIHVAKIALSIWELGGYKKSM--VPAVCNDAAAILI 199
Query: 177 MFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKA 236
+FDLT R TL+S+ W+ AR+ NQ AIP+L+GTKFD F+++P L+ I QAR YA+A
Sbjct: 200 LFDLTRRTTLHSVKQWFMLARQCNQGAIPVLVGTKFDQFIKMPEGLKSLITKQARLYAQA 259
Query: 237 MKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
M A L F+S +NINV+K+FK ++A++F+LP + RNLT GEP++ +
Sbjct: 260 MGAPLLFTSTPYNINVHKVFKIVLARIFDLPCNISRNLTPGEPLVVY 306
>gi|302762863|ref|XP_002964853.1| SPG1, ras family GTPase [Selaginella moellendorffii]
gi|300167086|gb|EFJ33691.1| SPG1, ras family GTPase [Selaginella moellendorffii]
Length = 306
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 145/227 (63%), Gaps = 12/227 (5%)
Query: 59 YQKLTRRSSSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVK 118
+ T + S P+ D E+ ++++ G DT V +K+ ++GDCQ GKTS ++
Sbjct: 90 FPHATAHAPKPSQPSDDVHESCGLKVAY----GEDT----VVVKVGIVGDCQTGKTSLMQ 141
Query: 119 --YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILF 176
VG+ + G+N ++K L + A+IA SIW++GG +S VP C DA AIL
Sbjct: 142 NYVVGDRSNGDESIFGVNAMDKVLDIHVAKIALSIWELGGYKKSM--VPAVCNDAAAILI 199
Query: 177 MFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKA 236
+FDLT R TL+S+ W+ AR+ NQ AIP+L+GTKFD F+++P L+ I QAR YA+A
Sbjct: 200 LFDLTRRTTLHSVKQWFMLARQCNQGAIPVLVGTKFDQFIKMPEGLKSLITKQARLYAQA 259
Query: 237 MKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
M A L F+S +NINV+K+FK ++A++F+LP + RNLT GEP++ +
Sbjct: 260 MGAPLLFTSTPYNINVHKVFKIVLARIFDLPCNISRNLTPGEPLVVY 306
>gi|396477150|ref|XP_003840208.1| hypothetical protein LEMA_P109940.1 [Leptosphaeria maculans JN3]
gi|312216779|emb|CBX96729.1| hypothetical protein LEMA_P109940.1 [Leptosphaeria maculans JN3]
Length = 429
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 127/185 (68%), Gaps = 5/185 (2%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 243 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 302
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D FV
Sbjct: 303 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 362
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P D Q I+ QAR +A+AMKA+L FSS +H+IN IFK +++K F+L T+ +
Sbjct: 363 NFPRDEQEEISNQARRFARAMKASLIFSSTSHSIN---IFKIVLSKAFDLKCTIPEIENV 419
Query: 277 GEPII 281
GEP++
Sbjct: 420 GEPLL 424
>gi|320165284|gb|EFW42183.1| sid3 [Capsaspora owczarzaki ATCC 30864]
Length = 218
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 125/187 (66%), Gaps = 2/187 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 32 VVVKVGMVGDSQIGKTSLMVKYVEGTFDEDYIQTLGVNFMEKTICIRNTEITFSIWDLGG 91
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDL+ + TLNS+ WY +AR +N+ AI LIGTKFD F
Sbjct: 92 QREFINMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKNAISFLIGTKFDIFA 151
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
+ P + Q + QAR YAKAMKA L F S +H INV KIFK +++K F+L T+ +
Sbjct: 152 QSPIEEQEEVTRQARKYAKAMKAPLIFCSTSHAINVQKIFKIVLSKAFDLKCTIPLIENV 211
Query: 277 GEPIIDF 283
GEPII++
Sbjct: 212 GEPIIEY 218
>gi|392576044|gb|EIW69176.1| hypothetical protein TREMEDRAFT_44341 [Tremella mesenterica DSM
1558]
Length = 216
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 125/189 (66%), Gaps = 2/189 (1%)
Query: 95 DSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIW 152
D + + LK+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIW
Sbjct: 23 DRNAIVLKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISIRNTEITFSIW 82
Query: 153 DVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKF 212
D+GG +P+ C DAVAILFMFDLT + TLNS+ WY +AR +N+TAIP+LIGTK+
Sbjct: 83 DLGGQREFVSMLPLVCNDAVAILFMFDLTRKATLNSVKEWYRQARGFNKTAIPVLIGTKY 142
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKR 272
D F D Q I QA+ ++KAM A L F S +H+INV KIFK ++AK F+L +
Sbjct: 143 DTFATFSRDEQEEITKQAKRFSKAMHAPLIFCSTSHSINVQKIFKIVLAKAFDLKCVIPE 202
Query: 273 NLTIGEPII 281
+GEPI+
Sbjct: 203 IDEVGEPIL 211
>gi|428162470|gb|EKX31612.1| hypothetical protein GUITHDRAFT_160353 [Guillardia theta CCMP2712]
Length = 213
Score = 186 bits (473), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 90/187 (48%), Positives = 129/187 (68%), Gaps = 2/187 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ A I FSIWD+GG
Sbjct: 27 VVVKVGMVGDAQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTVSIRNANITFSIWDLGG 86
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DA AILFMFDL+ TL S+ WY +AR +N+TA+ IL+GTK+D F
Sbjct: 87 QKEFINMLPLVCNDAAAILFMFDLSRVGTLKSVKEWYRQARGFNKTAVAILVGTKYDIFA 146
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P+ Q I QAR YAKAMKA L FSSA+H+INV K+FK +++++F+L + + +
Sbjct: 147 SYTPEEQADITKQARRYAKAMKAPLIFSSASHSINVQKLFKILLSRVFDLKCNIPKIVND 206
Query: 277 GEPIIDF 283
GEPI+++
Sbjct: 207 GEPILEY 213
>gi|328771379|gb|EGF81419.1| hypothetical protein BATDEDRAFT_87361 [Batrachochytrium
dendrobatidis JAM81]
Length = 226
Score = 186 bits (473), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/187 (48%), Positives = 127/187 (67%), Gaps = 2/187 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 40 VVIKVGMMGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTIAIRSTEITFSIWDLGG 99
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DA+AILFMFDL+ + TLNS+ WY +AR +N+TAIP LIGTK+D F
Sbjct: 100 QREFINMLPLVCNDAIAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGTKYDYFA 159
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I QAR +AKAM+A L F S +H+INV KIFK +++K F+L T+ R
Sbjct: 160 ASPYEEQEEITKQARRFAKAMRAPLIFCSTSHSINVQKIFKIVVSKAFDLRCTIPRIEET 219
Query: 277 GEPIIDF 283
G PI+++
Sbjct: 220 GAPILEY 226
>gi|343425098|emb|CBQ68635.1| probable TEM1-GTP-binding protein of the RAS superfamily
[Sporisorium reilianum SRZ2]
Length = 214
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 125/185 (67%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V LK+ ++GD QIGKTS V+YV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 25 VILKVGMVGDSQIGKTSLMVRYVEGSFNEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 84
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY +AR +N+TAIP L+GTK+D +
Sbjct: 85 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQARGFNKTAIPFLVGTKYDHYA 144
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
LP + Q I QAR ++KAMKA L F S +H INV KIFK ++AK F+L T+
Sbjct: 145 TLPREEQDEITKQARRFSKAMKAPLIFCSTSHAINVQKIFKVLLAKAFDLKCTIPEIKGA 204
Query: 277 GEPII 281
GEP++
Sbjct: 205 GEPLL 209
>gi|331227584|ref|XP_003326460.1| septum-promoting GTP-binding protein 1 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309305450|gb|EFP82041.1| septum-promoting GTP-binding protein 1 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 239
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 126/189 (66%), Gaps = 2/189 (1%)
Query: 95 DSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIW 152
D + V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIW
Sbjct: 46 DKNSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISIRNTEITFSIW 105
Query: 153 DVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKF 212
D+GG + +P+ C DAVAILFMFDL+ + TLNSI WY +AR +N+TAIP LIGTK+
Sbjct: 106 DLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAIPFLIGTKY 165
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKR 272
D F D Q I Q+R +AKAM+A L F S +H+INV KIFK +++K F+L T+
Sbjct: 166 DHFAAFSKDEQEEITRQSRRFAKAMRAPLIFCSTSHSINVQKIFKIVLSKAFDLKCTIPE 225
Query: 273 NLTIGEPII 281
GEP++
Sbjct: 226 ITGSGEPLL 234
>gi|390596104|gb|EIN05507.1| small monomeric GTPase [Punctularia strigosozonata HHB-11173 SS5]
Length = 223
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 127/191 (66%), Gaps = 2/191 (1%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFS 150
D ++ V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ V+ I FS
Sbjct: 28 DKNNSSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISVRRTTITFS 87
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGT 210
IWD+GG + +P+ C DAVAILFMFDL+ + TLNS+ WY +AR +N+TAIP LIGT
Sbjct: 88 IWDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGT 147
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTV 270
KFD F P D Q I QA+ +AKAM A+L F S + +INV KIFK ++AK F+L +
Sbjct: 148 KFDTFATFPRDEQEEITKQAKRFAKAMHASLIFCSTSASINVQKIFKIVLAKAFDLKCVI 207
Query: 271 KRNLTIGEPII 281
+GEPI+
Sbjct: 208 PEIEGVGEPIL 218
>gi|70992145|ref|XP_750921.1| GTP binding protein (SPG1) [Aspergillus fumigatus Af293]
gi|66848554|gb|EAL88883.1| GTP binding protein (SPG1), putative [Aspergillus fumigatus Af293]
Length = 389
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 130/196 (66%), Gaps = 13/196 (6%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 130 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 189
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D FV
Sbjct: 190 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 249
Query: 217 RLPPDLQWTIA-----------TQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
P + Q I+ +QA+ +AKAMKA+L FSS +H+INV KIFK ++AK F+
Sbjct: 250 NFPREDQEEISIQKMTRHVLMISQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFD 309
Query: 266 LPWTVKRNLTIGEPII 281
L T+ IGEP++
Sbjct: 310 LKCTIPEIENIGEPLL 325
>gi|71019857|ref|XP_760159.1| hypothetical protein UM04012.1 [Ustilago maydis 521]
gi|46099876|gb|EAK85109.1| hypothetical protein UM04012.1 [Ustilago maydis 521]
gi|68051237|tpe|CAI77247.1| TPA: Ras-GTPase [Ustilago maydis 521]
Length = 297
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 125/185 (67%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V LK+ ++GD QIGKTS V+YV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 34 VILKVGMVGDSQIGKTSLMVRYVEGSFNEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 93
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY +AR +N+TAIP L+GTK+D +
Sbjct: 94 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQARGFNKTAIPFLVGTKYDHYA 153
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
LP + Q I QAR ++KAMKA L F S +H INV KIFK ++AK F+L T+
Sbjct: 154 TLPREEQDEITKQARRFSKAMKAPLIFCSTSHAINVQKIFKVLLAKAFDLKCTIPEIKGP 213
Query: 277 GEPII 281
GEP++
Sbjct: 214 GEPLL 218
>gi|169856754|ref|XP_001835031.1| small monomeric GTPase [Coprinopsis cinerea okayama7#130]
gi|116503902|gb|EAU86797.1| small monomeric GTPase [Coprinopsis cinerea okayama7#130]
Length = 218
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 129/194 (66%), Gaps = 2/194 (1%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARI 147
+G + + + V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ V+ I
Sbjct: 20 NGENDERNSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISVRRTTI 79
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPIL 207
FSIWD+GG + +P+ C DAVAILFMFDL+ + TLNS+ WY +AR +N+TAIP L
Sbjct: 80 TFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFL 139
Query: 208 IGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLP 267
IGTKFD F P D Q I QA+ +A+AM A+L F S + +INV KIFK ++AK F+L
Sbjct: 140 IGTKFDQFATFPRDEQEEITKQAKRFARAMHASLIFCSTSASINVQKIFKIVLAKAFDLK 199
Query: 268 WTVKRNLTIGEPII 281
+ +GEPI+
Sbjct: 200 CVIPEIEGVGEPIL 213
>gi|159124490|gb|EDP49608.1| GTP binding protein (SPG1), putative [Aspergillus fumigatus A1163]
Length = 388
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 130/196 (66%), Gaps = 13/196 (6%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 129 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 188
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D FV
Sbjct: 189 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 248
Query: 217 RLPPDLQWTIA-----------TQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
P + Q I+ +QA+ +AKAMKA+L FSS +H+INV KIFK ++AK F+
Sbjct: 249 NFPREDQEEISIQKMTRHVLMISQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFD 308
Query: 266 LPWTVKRNLTIGEPII 281
L T+ IGEP++
Sbjct: 309 LKCTIPEIENIGEPLL 324
>gi|409077313|gb|EKM77679.1| hypothetical protein AGABI1DRAFT_114980 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426193199|gb|EKV43133.1| septum-promoting GTP-binding protein 1 [Agaricus bisporus var.
bisporus H97]
Length = 219
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 124/185 (67%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ V+ I FSIWD+GG
Sbjct: 30 VVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISVRRTTITFSIWDLGG 89
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDL+ + TLNS+ WY +AR +N+TAIP LIGTKFD F
Sbjct: 90 QREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGTKFDQFA 149
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P D Q I QA+ +AKAM A+L F S + +INV KIFK ++AK F+L + +
Sbjct: 150 TFPRDEQEEITKQAKRFAKAMHASLIFCSTSASINVQKIFKIVLAKAFDLKCVIPEIEGV 209
Query: 277 GEPII 281
GEPI+
Sbjct: 210 GEPIL 214
>gi|392586735|gb|EIW76071.1| small GTPase [Coniophora puteana RWD-64-598 SS2]
Length = 220
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 127/189 (67%), Gaps = 2/189 (1%)
Query: 95 DSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIW 152
D + V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ V+ I FSIW
Sbjct: 27 DKNSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISVRRTTITFSIW 86
Query: 153 DVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKF 212
D+GG + +P+ C DAVAILFMFDL+ + TLNS+ WY +AR +N+TAIP LIGTKF
Sbjct: 87 DLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGTKF 146
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKR 272
D F P D Q I QA+ +A+AM A+L F S++ +INV KIFK ++AK F+L +
Sbjct: 147 DTFATFPRDEQEEITKQAKRFARAMHASLIFCSSSASINVQKIFKIVLAKAFDLKCVIPE 206
Query: 273 NLTIGEPII 281
+GEP++
Sbjct: 207 IEGVGEPVL 215
>gi|443897609|dbj|GAC74949.1| ras GTPases [Pseudozyma antarctica T-34]
Length = 275
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 126/187 (67%), Gaps = 2/187 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V LK+ ++GD QIGKTS V+YV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 64 VILKVGMVGDSQIGKTSLMVRYVEGSFNEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 123
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY +AR +N+TAIP L+GTK+D +
Sbjct: 124 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQARGFNKTAIPFLVGTKYDHYA 183
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
LP + Q I QAR ++KAMKA L F S +H INV KIFK ++AK F+L T+
Sbjct: 184 TLPREEQDEITKQARRFSKAMKAPLIFCSTSHAINVQKIFKVLLAKAFDLKCTIPEIKGP 243
Query: 277 GEPIIDF 283
GEP++ +
Sbjct: 244 GEPLLIY 250
>gi|449545643|gb|EMD36614.1| septum-promoting GTP-binding protein 1 [Ceriporiopsis subvermispora
B]
Length = 226
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 126/189 (66%), Gaps = 2/189 (1%)
Query: 95 DSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIW 152
+ + V +K+ +LGD QIGKTS VKYV G+ E +Q G+N + KT+ V+ I FS+W
Sbjct: 33 EQNSVVIKVGMLGDSQIGKTSLMVKYVEGHFDEDYIQTLGVNFMEKTITVRRTSITFSLW 92
Query: 153 DVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKF 212
D+GG + +P+ C DAVAILFMFDL+ + TLNS+ WY +AR +N+TAIP LIGTKF
Sbjct: 93 DLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGTKF 152
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKR 272
D F P D Q I QA+ +AKAM A+L F S + +INV KIFK ++AK F+L +
Sbjct: 153 DTFATFPRDEQEEITKQAKRFAKAMHASLIFCSTSASINVQKIFKIVLAKAFDLKCVIPE 212
Query: 273 NLTIGEPII 281
+GEPI+
Sbjct: 213 IDGVGEPIL 221
>gi|353239293|emb|CCA71210.1| related to Ras-GTPase [Piriformospora indica DSM 11827]
Length = 221
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 127/193 (65%), Gaps = 2/193 (1%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFS 150
+ + + V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ V+ I FS
Sbjct: 26 NEEKNSVVVKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISVRRTTITFS 85
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGT 210
IWD+GG + +P+ C DAVAILFMFDL+ + TLNS+ WY +AR +N+TAIP LIGT
Sbjct: 86 IWDLGGQREFVNMLPLVCNDAVAILFMFDLSRKATLNSVKEWYRQARGFNKTAIPFLIGT 145
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTV 270
K+D F LP D Q I QA+ +AKAM A L F S +INV KIFK I+AK F+L +
Sbjct: 146 KYDLFASLPHDEQEEITKQAKRFAKAMHAGLVFCSTAASINVQKIFKIILAKAFDLKCVI 205
Query: 271 KRNLTIGEPIIDF 283
+GEPII +
Sbjct: 206 PEIDAVGEPIIQY 218
>gi|328853775|gb|EGG02911.1| hypothetical protein MELLADRAFT_49666 [Melampsora larici-populina
98AG31]
Length = 220
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 127/191 (66%), Gaps = 2/191 (1%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFS 150
+ D + V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FS
Sbjct: 25 NDDKNSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISIRNTEITFS 84
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGT 210
IWD+GG + +P+ C DAVAILFMFDL+ + TLNSI WY +AR +N+TAIP LIGT
Sbjct: 85 IWDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAIPFLIGT 144
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTV 270
K+D F D Q I Q+R +AKAM+A L F S +H+INV KIFK +++K F+L T+
Sbjct: 145 KYDHFAAFSKDEQEEITRQSRRFAKAMRAPLIFCSTSHSINVQKIFKIVLSKAFDLKCTI 204
Query: 271 KRNLTIGEPII 281
GEP++
Sbjct: 205 PEINGSGEPLL 215
>gi|393222433|gb|EJD07917.1| small GTPase [Fomitiporia mediterranea MF3/22]
Length = 233
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/195 (48%), Positives = 129/195 (66%), Gaps = 4/195 (2%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGAR 146
S G + +S V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ V+
Sbjct: 36 SEGDEKNS--VVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISVRRTT 93
Query: 147 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 206
I FSIWD+GG + +P+ C DAVAILFMFDL+ + TLNS+ WY +AR +N+TAIP
Sbjct: 94 ITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPF 153
Query: 207 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
LIGTK+D F P D Q I QA+ +AKAM A+L F S + +INV KIFK ++AK F+L
Sbjct: 154 LIGTKYDTFATFPRDEQEEITKQAKKFAKAMHASLIFCSTSASINVQKIFKIVLAKAFDL 213
Query: 267 PWTVKRNLTIGEPII 281
+ +GEPI+
Sbjct: 214 KCVIPEIEGVGEPIL 228
>gi|115399058|ref|XP_001215118.1| septum-promoting GTP-binding protein 1 [Aspergillus terreus
NIH2624]
gi|114192001|gb|EAU33701.1| septum-promoting GTP-binding protein 1 [Aspergillus terreus
NIH2624]
Length = 312
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 129/201 (64%), Gaps = 18/201 (8%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 107 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 166
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D FV
Sbjct: 167 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 226
Query: 217 RLPPDLQWTIATQ----------------ARAYAKAMKATLFFSSATHNINVNKIFKFIM 260
P + Q I+ Q A+ +AKAMKA+L FSS +H+INV KIFK ++
Sbjct: 227 NFPREDQEEISIQVRHIPRRGIPCTDGLKAKRFAKAMKASLIFSSTSHSINVQKIFKIVL 286
Query: 261 AKLFNLPWTVKRNLTIGEPII 281
AK F+L T+ IGEP++
Sbjct: 287 AKAFDLKCTIPEIENIGEPLL 307
>gi|409043843|gb|EKM53325.1| hypothetical protein PHACADRAFT_259605 [Phanerochaete carnosa
HHB-10118-sp]
Length = 224
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 142/219 (64%), Gaps = 4/219 (1%)
Query: 66 SSSESSPAPDTMEAG-LVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYV-GN 122
S+S S +M+AG + SR +G D +S +V +K+ ++GD QIGKTS VKYV G+
Sbjct: 2 SASSSHTPSASMDAGPSFQNSRQSENGDDKNSSVV-IKVGMVGDSQIGKTSLMVKYVEGS 60
Query: 123 EQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTS 182
E +Q G+N + KT+ V+ I FSIWD+GG + +P+ C DAVAILFMFDL+
Sbjct: 61 FDEDYIQTLGVNFMEKTITVRRTTITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLSR 120
Query: 183 RCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLF 242
+ TLNS+ WY +AR +N+TAIP LIGTKFD F P D Q I QA+ +AKAM A+L
Sbjct: 121 KSTLNSVKEWYRQARGFNKTAIPFLIGTKFDTFSTFPRDEQEEITKQAKRFAKAMHASLI 180
Query: 243 FSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPII 281
F S + +INV KIFK ++AK F+L + +GEPI+
Sbjct: 181 FCSTSASINVQKIFKIVLAKAFDLKCVIPEIEGVGEPIL 219
>gi|302687144|ref|XP_003033252.1| hypothetical protein SCHCODRAFT_84960 [Schizophyllum commune H4-8]
gi|300106946|gb|EFI98349.1| hypothetical protein SCHCODRAFT_84960 [Schizophyllum commune H4-8]
Length = 224
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/196 (47%), Positives = 130/196 (66%), Gaps = 3/196 (1%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGA 145
+ G D + +V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ V+
Sbjct: 25 LAEGNDEKNSVV-IKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISVRRT 83
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP 205
I FSIWD+GG + +P+ C DAVAILFMFDL+ + TLNS+ WY +AR +N+TAIP
Sbjct: 84 TITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIP 143
Query: 206 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
LIGTK+D F LP D Q I QA+ +A+AM A+L F S + +INV KIFK ++AK F+
Sbjct: 144 FLIGTKYDQFATLPRDEQEEITKQAKRFARAMHASLIFCSTSASINVQKIFKIVLAKAFD 203
Query: 266 LPWTVKRNLTIGEPII 281
L + +GEPI+
Sbjct: 204 LKCVIPEIEGVGEPIL 219
>gi|50420681|ref|XP_458877.1| DEHA2D09482p [Debaryomyces hansenii CBS767]
gi|49654544|emb|CAG87029.1| DEHA2D09482p [Debaryomyces hansenii CBS767]
Length = 199
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 124/185 (67%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V+LKI L+GD QIGKTS VKYV G+ E +Q G+N ++K + ++ I FSIWD+GG
Sbjct: 12 VALKIGLIGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMDKKIQIRNTVITFSIWDLGG 71
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D F+
Sbjct: 72 QKEFINMLPLVSNDAVAILFMFDLTRKSTLNSIKEWYRQVRGFNKTAIPFLVGTKYDQFI 131
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
LP Q I QA+ + AMKA + F S +H+INV KIFK I++K F+L + + +
Sbjct: 132 DLPYQDQMEITQQAKKFGHAMKAPVIFCSTSHSINVQKIFKIILSKAFDLRLNLDEIVNV 191
Query: 277 GEPII 281
GEPI+
Sbjct: 192 GEPIL 196
>gi|358056852|dbj|GAA97202.1| hypothetical protein E5Q_03878 [Mixia osmundae IAM 14324]
Length = 236
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 127/191 (66%), Gaps = 2/191 (1%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFS 150
D D + V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + K++ ++ I FS
Sbjct: 41 DDDRNSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKSISIRNTEITFS 100
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGT 210
IWD+GG + +P+ C DAVAILFMFDL+ + TLNSI WY +AR +N+TAIP L+GT
Sbjct: 101 IWDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAIPFLVGT 160
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTV 270
K+D F L Q + QA+ +AKAMKA L F S +H+INV KIFK +++K F+L T+
Sbjct: 161 KYDHFSTLAESEQEDVTRQAKRFAKAMKAPLIFCSTSHSINVQKIFKIVLSKAFDLKCTL 220
Query: 271 KRNLTIGEPII 281
GEP++
Sbjct: 221 PEITETGEPLL 231
>gi|389742746|gb|EIM83932.1| small GTPase [Stereum hirsutum FP-91666 SS1]
Length = 229
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 127/191 (66%), Gaps = 2/191 (1%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFS 150
+ + + V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ V+ I FS
Sbjct: 34 NDEKNSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISVRRTTITFS 93
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGT 210
IWD+GG + +P+ C DAVAILFMFDL+ + TLNS+ WY +AR +N+TAIP LIGT
Sbjct: 94 IWDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGT 153
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTV 270
KFD F P D Q I QA+ +AKAM A+L F S + +INV KIFK ++AK F+L +
Sbjct: 154 KFDTFATFPRDEQEEITKQAKRFAKAMHASLIFCSTSASINVQKIFKIVLAKAFDLKCVI 213
Query: 271 KRNLTIGEPII 281
+GEP++
Sbjct: 214 PEIEGVGEPVL 224
>gi|403419848|emb|CCM06548.1| predicted protein [Fibroporia radiculosa]
Length = 220
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 126/189 (66%), Gaps = 2/189 (1%)
Query: 95 DSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIW 152
+ + V +K+ +LGD QIGKTS VKYV G+ E +Q G+N + KT+ V+ I FS+W
Sbjct: 27 EQNSVVIKVGMLGDSQIGKTSLMVKYVEGHFDEDYIQTLGVNFMEKTITVRRTSITFSLW 86
Query: 153 DVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKF 212
D+GG + +P+ C DAVAILFMFDL+ + TLNS+ WY +AR +N+TAIP LIGTKF
Sbjct: 87 DLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGTKF 146
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKR 272
D F P D Q I QA+ +AKAM A+L F S + +INV KIFK ++AK F+L +
Sbjct: 147 DTFSTFPRDEQEEITKQAKRFAKAMHASLIFCSTSASINVQKIFKIVLAKAFDLKCVIPE 206
Query: 273 NLTIGEPII 281
+GEP++
Sbjct: 207 IDGVGEPVL 215
>gi|392562659|gb|EIW55839.1| small monomeric GTPase [Trametes versicolor FP-101664 SS1]
Length = 219
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 126/189 (66%), Gaps = 2/189 (1%)
Query: 95 DSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIW 152
+ + V +K+ +LGD QIGKTS VKYV G+ E +Q G+N + KT+ V+ I FS+W
Sbjct: 26 EQNSVVIKVGMLGDSQIGKTSLMVKYVEGHFDEDYIQTLGVNFMEKTITVRRTSITFSLW 85
Query: 153 DVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKF 212
D+GG + +P+ C DAVAILFMFDL+ + TLNS+ WY +AR +N+TAIP LIGTKF
Sbjct: 86 DLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGTKF 145
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKR 272
D F P D Q I QA+ +AKAM A+L F S + +INV KIFK ++AK F+L +
Sbjct: 146 DTFSTFPRDEQEEITKQAKRFAKAMHASLIFCSTSASINVQKIFKIVLAKAFDLKCVIPE 205
Query: 273 NLTIGEPII 281
+GEP++
Sbjct: 206 IDGVGEPVL 214
>gi|254573698|ref|XP_002493958.1| GTP-binding protein of the ras superfamily involved in termination
of M-phase [Komagataella pastoris GS115]
gi|238033757|emb|CAY71779.1| GTP-binding protein of the ras superfamily involved in termination
of M-phase [Komagataella pastoris GS115]
Length = 219
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 136/220 (61%), Gaps = 18/220 (8%)
Query: 64 RRSSSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYV-G 121
RRS SE P + +++ V++KI L+GD QIGKTS VKYV G
Sbjct: 11 RRSHSEQQNVPHSQR----------------ETNSVAVKIGLIGDAQIGKTSLMVKYVEG 54
Query: 122 NEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLT 181
E Q G N + + + ++ +I SIWD+GG+ + +P+ DAV I+FMFDLT
Sbjct: 55 CYDENYTQTLGANFMERIINIRNTQITLSIWDLGGEKEFINMLPLVTTDAVVIIFMFDLT 114
Query: 182 SRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATL 241
+ TLNSI WY +AR +N+TAIP L+GTK+D F+ LP + Q I QA+ YA+AM A+L
Sbjct: 115 RKSTLNSIKEWYRQARGFNKTAIPFLVGTKYDLFIDLPDEDQIEITNQAKKYARAMSASL 174
Query: 242 FFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPII 281
FSS +H+IN+ K+FK I++K+F++ T+ + GEP++
Sbjct: 175 IFSSTSHSINIQKLFKVILSKVFDIKATIPEIVNTGEPLL 214
>gi|336366022|gb|EGN94370.1| hypothetical protein SERLA73DRAFT_188215 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378696|gb|EGO19853.1| hypothetical protein SERLADRAFT_478249 [Serpula lacrymans var.
lacrymans S7.9]
Length = 226
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 127/191 (66%), Gaps = 2/191 (1%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFS 150
+ + + V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ V+ I FS
Sbjct: 31 NEEKNSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISVRRTTITFS 90
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGT 210
IWD+GG + +P+ C DAVAILFMFDL+ + TLNS+ WY +AR +N+TAIP LIGT
Sbjct: 91 IWDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGT 150
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTV 270
KFD F P D Q I QA+ +A+AM A+L F S + +INV KIFK ++AK F+L +
Sbjct: 151 KFDTFATFPRDEQEEITKQAKRFARAMHASLIFCSTSASINVQKIFKIVLAKAFDLKCVI 210
Query: 271 KRNLTIGEPII 281
IGEP++
Sbjct: 211 PEIEGIGEPVL 221
>gi|395331578|gb|EJF63959.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 277
Score = 183 bits (464), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 124/185 (67%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ +LGD QIGKTS VKYV G+ E +Q G+N + KT+ V+ I FS+WD+GG
Sbjct: 32 VVIKVGMLGDSQIGKTSLMVKYVEGHFDEDYIQTLGVNFMEKTISVRRTSITFSLWDLGG 91
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDL+ + TLNS+ WY +AR +N+TAIP LIGTKFD F
Sbjct: 92 QREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGTKFDTFS 151
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P D Q I QA+ +AKAM A+L F S + +INV KIFK ++AK F+L + +
Sbjct: 152 TFPRDEQEEITKQAKRFAKAMHASLIFCSTSASINVQKIFKIVLAKAFDLKCVIPEIDGV 211
Query: 277 GEPII 281
GEPI+
Sbjct: 212 GEPIL 216
>gi|344233903|gb|EGV65773.1| small GTPase [Candida tenuis ATCC 10573]
Length = 200
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 128/192 (66%), Gaps = 2/192 (1%)
Query: 92 YDTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAF 149
+D + V+LK+ L+GD QIGKTS VKYV G + +Q G+N ++K + ++ I F
Sbjct: 6 HDEQGNQVALKVGLIGDSQIGKTSLMVKYVEGTFDDDYIQTLGVNFMDKKIRIRNTIITF 65
Query: 150 SIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIG 209
SIWD+GG + +P+ DA+A+LFMFDLT + TLNSI WY + R +N+TAIP L+G
Sbjct: 66 SIWDLGGQKEFINMLPLVSNDAIAMLFMFDLTRKSTLNSIKEWYRQVRGFNKTAIPFLVG 125
Query: 210 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWT 269
TK+D+F+ LP Q I QA+ +A AMK+ + F S +H+INV KIFK I++K F+L
Sbjct: 126 TKYDEFIDLPHQDQIEITQQAKKFANAMKSPVVFCSTSHSINVQKIFKIILSKAFDLKLN 185
Query: 270 VKRNLTIGEPII 281
++ +GEPI+
Sbjct: 186 LEEITNVGEPIL 197
>gi|388857496|emb|CCF48852.1| probable Ras-GTPase [Ustilago hordei]
Length = 216
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 124/185 (67%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V LK+ ++GD QIGKTS V+YV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 27 VILKVGMVGDSQIGKTSLMVRYVEGSFNEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 86
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY +AR +N+TAIP L+GTK+D +
Sbjct: 87 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQARGFNKTAIPFLVGTKYDHYA 146
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
LP + Q I QA ++KAMKA L F S +H INV KIFK ++AK F+L T+
Sbjct: 147 TLPREEQDEITKQATRFSKAMKAPLIFCSTSHAINVQKIFKVLLAKAFDLKCTIPEIKGG 206
Query: 277 GEPII 281
GEP++
Sbjct: 207 GEPLL 211
>gi|402219698|gb|EJT99771.1| small monomeric GTPase [Dacryopinax sp. DJM-731 SS1]
Length = 217
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/187 (49%), Positives = 126/187 (67%), Gaps = 2/187 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V LK+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ V+ I FSIWD+GG
Sbjct: 28 VVLKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISVRKTTITFSIWDLGG 87
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ DAVA+LFMFDL+ + TLNS+ WY +AR +N++AIP LIGTKFD F
Sbjct: 88 QREFVNMLPLVSNDAVALLFMFDLSRKSTLNSVKEWYRQARGFNKSAIPFLIGTKFDLFA 147
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
+L D Q + QA+ +AKAM A L FSS + +INV KIFK ++AK F+L + T+
Sbjct: 148 QLGRDEQEEVTKQAKRFAKAMHAPLIFSSTSASINVQKIFKIVLAKAFDLKCVIPEIDTV 207
Query: 277 GEPIIDF 283
GEPI+ +
Sbjct: 208 GEPIVQY 214
>gi|344304528|gb|EGW34760.1| hypothetical protein SPAPADRAFT_145190 [Spathaspora passalidarum
NRRL Y-27907]
Length = 202
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/187 (49%), Positives = 124/187 (66%), Gaps = 2/187 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V+LKI L+GD QIGKTS VKYV G+ E +Q G+N ++K + ++ I FSIWD+GG
Sbjct: 15 VALKIGLIGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMDKKIQIRNTTITFSIWDLGG 74
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ DAVAILFMFDLT + TLNSI WY +AR +N+TAIP L+GTK+D F+
Sbjct: 75 QKEFINMLPLVSNDAVAILFMFDLTRKSTLNSIKEWYRQARGFNKTAIPFLVGTKYDQFI 134
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L Q I QA+ + AMKA + F S +H+INV KIFK I++K F+L + +
Sbjct: 135 DLSFQDQLEITQQAKKFGSAMKAPVVFCSTSHSINVQKIFKIILSKAFDLKLNLDEITNV 194
Query: 277 GEPIIDF 283
GEPI+ F
Sbjct: 195 GEPILIF 201
>gi|170116620|ref|XP_001889500.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164635502|gb|EDQ99808.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 247
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 127/191 (66%), Gaps = 2/191 (1%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFS 150
+ + + V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ V+ I FS
Sbjct: 25 NDEKNSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISVRRTTITFS 84
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGT 210
IWD+GG + +P+ C DAVAILFMFDL+ + TLNS+ WY +AR +N+TAIP LIGT
Sbjct: 85 IWDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGT 144
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTV 270
KFD F P D Q I QA+ +A+AM A+L F S + +INV KIFK ++AK F+L +
Sbjct: 145 KFDQFATFPRDEQEEITKQAKRFARAMHASLIFCSTSASINVQKIFKIVLAKAFDLKCVI 204
Query: 271 KRNLTIGEPII 281
+GEPI+
Sbjct: 205 PEIEGVGEPIL 215
>gi|241948475|ref|XP_002416960.1| M-phase controlling GTPase, putative; septum-promoting GTP-binding
protein, putative [Candida dubliniensis CD36]
gi|223640298|emb|CAX44548.1| M-phase controlling GTPase, putative [Candida dubliniensis CD36]
Length = 200
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 124/185 (67%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V+LKI L+GD QIGKTS VKYV G+ E +Q G+N ++K + ++ I FSIWD+GG
Sbjct: 13 VALKIGLIGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMDKKIQIRNTTITFSIWDLGG 72
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D F+
Sbjct: 73 QKEFINMLPLVSNDAVAILFMFDLTRKSTLNSIKEWYRQVRGFNKTAIPFLVGTKYDQFI 132
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L Q I QA+ + AMKA + F S +H+INV KIFK I++K F+L ++ + +
Sbjct: 133 DLSFQDQIEITQQAKKFGSAMKAPVIFCSTSHSINVQKIFKIILSKAFDLKLNLEEIVNV 192
Query: 277 GEPII 281
GEPI+
Sbjct: 193 GEPIL 197
>gi|448520296|ref|XP_003868272.1| Tem1 protein [Candida orthopsilosis Co 90-125]
gi|380352611|emb|CCG22838.1| Tem1 protein [Candida orthopsilosis]
Length = 198
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/187 (49%), Positives = 124/187 (66%), Gaps = 2/187 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V+LKI L+GD QIGKTS VKYV G+ E +Q G+N ++K + ++ I FSIWD+GG
Sbjct: 11 VALKIGLIGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMDKRIQIRNTTIMFSIWDLGG 70
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ DAVAILFMFDLT + TLNSI WY + R +N+TAIP LIGTK+D F+
Sbjct: 71 QKEFINMLPLVSNDAVAILFMFDLTRKSTLNSIKEWYRQVRGFNKTAIPFLIGTKYDQFI 130
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L Q I QA+ + AMKA + F S +H+INV KIFK I++K F+L + + +
Sbjct: 131 DLSFQDQIEITQQAKKFGAAMKAPVIFCSTSHSINVQKIFKIILSKAFDLKLNLDEIVNV 190
Query: 277 GEPIIDF 283
GEPI+ F
Sbjct: 191 GEPILIF 197
>gi|68468881|ref|XP_721499.1| potential Ras family GTPase [Candida albicans SC5314]
gi|46443419|gb|EAL02701.1| potential Ras family GTPase [Candida albicans SC5314]
Length = 226
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 123/185 (66%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V+LKI L+GD QIGKTS VKYV G+ E +Q G+N ++K + ++ I FSIWD+GG
Sbjct: 39 VALKIGLIGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMDKKIQIRNTTITFSIWDLGG 98
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D F+
Sbjct: 99 QKEFINMLPLVSNDAVAILFMFDLTRKSTLNSIKEWYRQVRGFNKTAIPFLVGTKYDQFI 158
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L Q I QA+ + AMKA + F S +H+INV KIFK I++K F+L + + +
Sbjct: 159 DLSFQDQIEITQQAKKFGSAMKAPVIFCSTSHSINVQKIFKIILSKAFDLKLNLDEIVNV 218
Query: 277 GEPII 281
GEPI+
Sbjct: 219 GEPIL 223
>gi|354544267|emb|CCE40990.1| hypothetical protein CPAR2_110280 [Candida parapsilosis]
Length = 200
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 93/197 (47%), Positives = 130/197 (65%), Gaps = 3/197 (1%)
Query: 90 SGYDTD-SDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGAR 146
G D D ++ V+LK+ L+GD QIGKTS VKYV G+ E +Q G+N ++K + ++
Sbjct: 3 EGQDQDQNNQVALKVGLIGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMDKRIQIRNTT 62
Query: 147 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 206
I FSIWD+GG + +P+ DAVAILFMFDLT + TLNSI +Y + R +N+TAIP
Sbjct: 63 IMFSIWDLGGQKEFINMLPLVSNDAVAILFMFDLTRKSTLNSIKEFYRQVRGFNKTAIPF 122
Query: 207 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
LIGTK+D F+ L Q I QA+ + AMKA + F S +H+INV KIFK I++K F+L
Sbjct: 123 LIGTKYDQFIDLSFQDQIEITQQAKKFGAAMKAPVIFCSTSHSINVQKIFKIILSKAFDL 182
Query: 267 PWTVKRNLTIGEPIIDF 283
++ + +GEPI+ F
Sbjct: 183 KLNLEEIVNVGEPILIF 199
>gi|150865994|ref|XP_001385439.2| hypothetical protein PICST_62699 [Scheffersomyces stipitis CBS
6054]
gi|149387250|gb|ABN67410.2| GTP-binding protein of the ras superfamily [Scheffersomyces
stipitis CBS 6054]
Length = 199
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 124/185 (67%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V+LKI L+GD QIGKTS VKYV G+ E +Q G+N ++K + ++ I FSIWD+GG
Sbjct: 12 VALKIGLIGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMDKKIQIRNTTITFSIWDLGG 71
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ DAVAILFMFDLT + TLNSI WY + R +N+TA+P LIGTK+D F+
Sbjct: 72 QKEFINMLPLVSNDAVAILFMFDLTRKSTLNSIKEWYRQVRGFNKTALPFLIGTKYDQFI 131
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L Q I +QA+ + +AMKA + F S +H+INV KIFK I++K F+L + I
Sbjct: 132 DLSYQDQVEITSQAKKFGRAMKAPVIFCSTSHSINVQKIFKIILSKAFDLRLNLDEINNI 191
Query: 277 GEPII 281
GEPI+
Sbjct: 192 GEPIL 196
>gi|68469427|ref|XP_721228.1| potential Ras family GTPase [Candida albicans SC5314]
gi|46443137|gb|EAL02421.1| potential Ras family GTPase [Candida albicans SC5314]
Length = 226
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 123/185 (66%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V+LKI L+GD QIGKTS VKYV G+ E +Q G+N ++K + ++ I FSIWD+GG
Sbjct: 39 VALKIGLIGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMDKKIQIRNTTITFSIWDLGG 98
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D F+
Sbjct: 99 QKEFINMLPLVSNDAVAILFMFDLTRKSTLNSIKEWYRQVRGFNKTAIPFLVGTKYDQFI 158
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L Q I QA+ + AMKA + F S +H+INV KIFK I++K F+L + + +
Sbjct: 159 DLSFQDQIEITQQAKKFGSAMKAPVIFCSTSHSINVQKIFKIILSKAFDLKLNLDEIVNV 218
Query: 277 GEPII 281
GEPI+
Sbjct: 219 GEPIL 223
>gi|321264910|ref|XP_003197172.1| small monomeric GTPase [Cryptococcus gattii WM276]
gi|317463650|gb|ADV25385.1| Small monomeric GTPase, putative [Cryptococcus gattii WM276]
Length = 193
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 121/185 (65%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
+ LK+ ++GD QIGKTS VKYV G+ E +Q G+N + K + ++ I FSIWD+GG
Sbjct: 4 IVLKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKAISIRNTEITFSIWDLGG 63
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+P+ DAVAILFMFDLT + TLNS+ WY +AR +N+TAIP+LIGTK+D F
Sbjct: 64 QREFVSMLPLVSNDAVAILFMFDLTRKSTLNSVKEWYRQARGFNKTAIPVLIGTKYDQFA 123
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P Q I QA+ ++KAM A L F S +H+INV KIFK ++AK F+L + +
Sbjct: 124 SFPRGEQEEITRQAKRFSKAMHAPLIFCSTSHSINVQKIFKIVLAKAFDLKCVIPEIDAV 183
Query: 277 GEPII 281
GEPI+
Sbjct: 184 GEPIL 188
>gi|388580622|gb|EIM20935.1| small monomeric GTPase [Wallemia sebi CBS 633.66]
Length = 191
Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 91/183 (49%), Positives = 123/183 (67%), Gaps = 2/183 (1%)
Query: 101 LKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
LK +L+GD IGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 5 LKTALVGDSSIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISIRQTEITFSIWDLGGQR 64
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
+ +P+ C DAVAILFMFDL+ + TLNSI WY +AR +N+TAIP L+GTKFD F L
Sbjct: 65 EFVNMLPLVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAIPFLVGTKFDIFAGL 124
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGE 278
P + Q I QA+ +AKAM A L F S +H+I+V KIFK +++K F+L T+ GE
Sbjct: 125 PKEDQDEITKQAKRFAKAMHAPLIFCSTSHSIHVQKIFKIVLSKAFDLKCTIPEVHESGE 184
Query: 279 PII 281
P++
Sbjct: 185 PLL 187
>gi|385302986|gb|EIF47089.1| gtp binding protein [Dekkera bruxellensis AWRI1499]
Length = 235
Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 130/195 (66%), Gaps = 2/195 (1%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGN-EQERSLQMAGLNLINKTLMVQGAR 146
+S + ++ + V+LK+ L+GD Q+GKTS VKYV N E Q G+N + +T+ ++
Sbjct: 36 NSSHHSEKNTVTLKVGLVGDAQVGKTSLMVKYVENCFDEIYTQTLGVNFMERTIRIRNTE 95
Query: 147 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 206
I FSIWD+GG++ + +P+ DAVA+LFMFDL+ + TL S+ WY +AR +N+TAIP
Sbjct: 96 ITFSIWDLGGEAEFTNMLPLVASDAVAVLFMFDLSRKITLXSVKDWYRQARGFNRTAIPF 155
Query: 207 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
L+GTK+D FV LP + Q I QA+ YA+AM A L F+S +IN+ KIFK +++K F+L
Sbjct: 156 LVGTKYDLFVDLPDEQQEEITRQAKKYARAMNAPLIFTSTCASINIQKIFKIVISKTFDL 215
Query: 267 PWTVKRNLTIGEPII 281
+ + GEPI+
Sbjct: 216 RLKIPEIVNTGEPIL 230
>gi|58270378|ref|XP_572345.1| small monomeric GTPase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134117828|ref|XP_772295.1| hypothetical protein CNBL1630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254908|gb|EAL17648.1| hypothetical protein CNBL1630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228603|gb|AAW45038.1| small monomeric GTPase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 193
Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 121/185 (65%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
+ LK+ ++GD QIGKTS VKYV G+ E +Q G+N + K + ++ I FSIWD+GG
Sbjct: 4 IVLKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKAISIRNTEITFSIWDLGG 63
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+P+ DAVAILFMFDLT + TLNS+ WY +AR +N+TAIP+LIGTK+D F
Sbjct: 64 QREFVSMLPLVSNDAVAILFMFDLTRKSTLNSVKEWYRQARGFNKTAIPVLIGTKYDQFA 123
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P Q I QA+ ++KAM A L F S +H+INV KIFK ++AK F+L + +
Sbjct: 124 SFPRAEQEEITRQAKRFSKAMHAPLIFCSTSHSINVQKIFKIVLAKAFDLKCVIPEIDAV 183
Query: 277 GEPII 281
GEPI+
Sbjct: 184 GEPIL 188
>gi|171692925|ref|XP_001911387.1| hypothetical protein [Podospora anserina S mat+]
gi|170946411|emb|CAP73212.1| unnamed protein product [Podospora anserina S mat+]
Length = 347
Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 102/239 (42%), Positives = 144/239 (60%), Gaps = 26/239 (10%)
Query: 52 GKQPAVRYQKLTRRSSSESSPAPDTMEAGLVELSRTFSSGYDTDSDL-------VSLKIS 104
G QP ++ L+R S S AP + + S+G D+ V +K+
Sbjct: 121 GNQP-LQQPSLSRPPSGLSGQAP----------TASSSNGQGVAGDVQNNGRNHVVIKVG 169
Query: 105 LLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFD 162
++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG +
Sbjct: 170 MVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVN 229
Query: 163 HVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDL 222
+P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP+L+GTK+D FV L +
Sbjct: 230 MLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPVLVGTKYDHFVNLSREE 289
Query: 223 QWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPII 281
Q I+TQ AM+A L FSS +H+INV KIFK +++K F+L T+ +GEP++
Sbjct: 290 QEEISTQ------AMRAALIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEISNVGEPLL 342
>gi|405124177|gb|AFR98939.1| septum-promoting GTP-binding protein 1 [Cryptococcus neoformans
var. grubii H99]
Length = 232
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 129/205 (62%), Gaps = 18/205 (8%)
Query: 95 DSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIW 152
D + + LK+ ++GD QIGKTS VKYV G+ E +Q G+N + K + ++ I FSIW
Sbjct: 23 DRNSIVLKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKAISIRNTEITFSIW 82
Query: 153 DVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKF 212
D+GG +P+ DAVAILFMFDLT + TLNSI WY +AR +N+TAIP+LIGTK+
Sbjct: 83 DLGGQREFVSMLPLVSNDAVAILFMFDLTRKSTLNSIKEWYRQARGFNKTAIPVLIGTKY 142
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN----LPW 268
D F P + Q I QA+ ++KAM A L F S +H+INV KIFK ++AK F+ LP
Sbjct: 143 DQFASFPREEQEEITRQAKRFSKAMHAPLIFCSTSHSINVQKIFKIVLAKAFDLKACLPH 202
Query: 269 TVKRNLT------------IGEPII 281
+++ LT +GEPI+
Sbjct: 203 SMRSILTFHSQCVIPEIDAVGEPIL 227
>gi|393229996|gb|EJD37608.1| small monomeric GTPase [Auricularia delicata TFB-10046 SS5]
Length = 217
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 127/189 (67%), Gaps = 2/189 (1%)
Query: 95 DSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIW 152
D + V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ V+ I FSIW
Sbjct: 24 DKNSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTITVRRTTITFSIW 83
Query: 153 DVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKF 212
D+GG + +P+ C DAVAILFMFDL+ + TLNS+ WY +AR +N+TAIP L+GTKF
Sbjct: 84 DLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLVGTKF 143
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKR 272
D F P D Q I QA+ +A+AMKA+L F S + +INV KIFK ++AK F+L +
Sbjct: 144 DVFSTFPRDEQEEITKQAKRFARAMKASLIFCSTSASINVQKIFKIVLAKAFDLKCVIPE 203
Query: 273 NLTIGEPII 281
+GEP++
Sbjct: 204 IEGVGEPVL 212
>gi|323448670|gb|EGB04565.1| hypothetical protein AURANDRAFT_32347 [Aureococcus anophagefferens]
Length = 196
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 125/187 (66%), Gaps = 2/187 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD Q+GKT+ VKYV N + +Q G+N + K++ ++ I FSIWD+GG
Sbjct: 10 VMVKVGMVGDSQVGKTTMMVKYVENRLDDEYIQTLGVNFMEKSITLRNTEITFSIWDLGG 69
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+P+ C DA A+LFMFDL+ + TL SI WY + R N++A +L+GTK+D FV
Sbjct: 70 HREFLSMLPLVCNDAAAVLFMFDLSRKSTLTSIKEWYRQVRGLNRSAFALLVGTKYDVFV 129
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
LPP+ Q I AR +AKAMKA F+SA +INV K+FK I++++F+L T+++ + +
Sbjct: 130 TLPPEEQAEIDRNARKFAKAMKAPCIFTSAHESINVQKMFKVILSRVFDLKCTLEKLVEV 189
Query: 277 GEPIIDF 283
GEP++ F
Sbjct: 190 GEPLLIF 196
>gi|50549767|ref|XP_502355.1| YALI0D03157p [Yarrowia lipolytica]
gi|49648223|emb|CAG80543.1| YALI0D03157p [Yarrowia lipolytica CLIB122]
Length = 200
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 127/185 (68%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
VSLKI L+GD QIGKTS VKY GN E +Q G+N + KT+ ++ I F IWD+GG
Sbjct: 9 VSLKIGLIGDAQIGKTSLMVKYAEGNFDEDYVQTLGVNFMEKTVSIRDTEITFLIWDLGG 68
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ D+VAILFMFDLT + TLNS+ WY +AR +N+TAIP L+GTK+D FV
Sbjct: 69 QREFVNMLPLVSNDSVAILFMFDLTRKSTLNSVKEWYRQARGFNKTAIPFLVGTKYDLFV 128
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
+LP + Q I QA+ +AKAMKA+L F S +H+INV KIFK +++K F+L T+
Sbjct: 129 QLPKEDQEEITQQAKKFAKAMKASLIFCSTSHSINVQKIFKIVLSKAFDLKLTIPEITNT 188
Query: 277 GEPII 281
GEPI+
Sbjct: 189 GEPIL 193
>gi|326533162|dbj|BAJ93553.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 105
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/96 (83%), Positives = 87/96 (90%)
Query: 188 SIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSAT 247
SI WY ARKWN+TAIPILIGTKFDDF +LP ++QWTI QARAYA+AMKATLFFSSAT
Sbjct: 10 SITDWYERARKWNKTAIPILIGTKFDDFAQLPLEMQWTIVDQARAYARAMKATLFFSSAT 69
Query: 248 HNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
HNINVNKIFKFI AKLFNLPWTV+RNLT+GEPIIDF
Sbjct: 70 HNINVNKIFKFITAKLFNLPWTVERNLTVGEPIIDF 105
>gi|430814096|emb|CCJ28623.1| unnamed protein product [Pneumocystis jirovecii]
Length = 188
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 107/152 (70%)
Query: 132 GLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVG 191
G+N + KT+ ++ I FSIWD+GG + +P+ C DAVAILFMFDLT + TLNSI
Sbjct: 34 GVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKE 93
Query: 192 WYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNIN 251
WY +AR +N+TAIP L+GTK+D F P + Q I QAR +A+AMKA+L F S +H+IN
Sbjct: 94 WYRQARGFNKTAIPFLVGTKYDHFANFPKEDQEEITKQARRFARAMKASLIFCSTSHSIN 153
Query: 252 VNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
V KIFK +++K F+L T+ + IGEPI+++
Sbjct: 154 VQKIFKIVLSKAFDLKCTIPEIINIGEPILEY 185
>gi|298714110|emb|CBJ27291.1| SPG1, Ras superfamily GTPase [Ectocarpus siliculosus]
Length = 237
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 125/197 (63%), Gaps = 2/197 (1%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGAR 146
+ +D + V +K+ ++GD Q+GKT+ VKYV N+ E + G+N + KT+ ++
Sbjct: 4 TKAHDASRNNVVVKVGMVGDAQVGKTTLMVKYVENKFDEEYIMTLGVNFMEKTITLRNTE 63
Query: 147 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 206
I FSIWD+GG +P+ C DAVAI FMFDL+ + TLNS+ WY + R N++A
Sbjct: 64 ITFSIWDLGGQREFLSMLPLVCNDAVAIFFMFDLSRKSTLNSVKEWYRQVRGLNRSAYAF 123
Query: 207 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
L+GTK+D + +P + Q I QAR +AKAM A L F+SA+H+INV K+FK +++++F+L
Sbjct: 124 LVGTKYDLYTSMPAEEQRDIDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSRVFDL 183
Query: 267 PWTVKRNLTIGEPIIDF 283
+ GEP++ F
Sbjct: 184 RCNLDEISGAGEPLLLF 200
>gi|301116934|ref|XP_002906195.1| septum-promoting GTP-binding protein 1 [Phytophthora infestans
T30-4]
gi|262107544|gb|EEY65596.1| septum-promoting GTP-binding protein 1 [Phytophthora infestans
T30-4]
Length = 181
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 116/181 (64%), Gaps = 2/181 (1%)
Query: 105 LLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFD 162
++GD Q+GKTS VKYV G E + G+N + KT+ ++ I FSIWD+GG
Sbjct: 1 MVGDAQVGKTSLMVKYVEGKFDEDYIHTLGVNFMEKTIALRNTEITFSIWDLGGHREFIS 60
Query: 163 HVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDL 222
+P+ C DAVAILFMFDL+ + TL SI WY + R N+ A P L+G K+D F +
Sbjct: 61 MLPLVCNDAVAILFMFDLSRKATLTSIKEWYRQVRSINKNAFPFLVGMKYDHFANFAAEE 120
Query: 223 QWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIID 282
Q I QAR +AKAMKA L F+SA+H+INV K+FK +++K+F+L TV +G+PI+
Sbjct: 121 QEDITKQARKFAKAMKAPLIFTSASHSINVQKVFKVVLSKVFDLKCTVPIIDRVGDPILQ 180
Query: 283 F 283
+
Sbjct: 181 Y 181
>gi|348688068|gb|EGZ27882.1| hypothetical protein PHYSODRAFT_472500 [Phytophthora sojae]
Length = 181
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 116/181 (64%), Gaps = 2/181 (1%)
Query: 105 LLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFD 162
++GD Q+GKTS VKYV G E + G+N + KT+ ++ I FSIWD+GG
Sbjct: 1 MVGDAQVGKTSLMVKYVEGKFDEDYIHTLGVNFMEKTIALRNTEITFSIWDLGGHREFIS 60
Query: 163 HVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDL 222
+P+ C DAVAILFMFDL+ + TL SI WY + R N+ A P L+G K+D F +
Sbjct: 61 MLPLVCNDAVAILFMFDLSRKATLTSIKEWYRQVRSINKNAFPFLVGMKYDHFANFAVEE 120
Query: 223 QWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIID 282
Q I QAR +AKAMKA L F+SA+H+INV K+FK +++K+F+L TV +G+PI+
Sbjct: 121 QEDITKQARKFAKAMKAPLIFTSASHSINVQKVFKVVLSKVFDLKCTVPIIDRVGDPILQ 180
Query: 283 F 283
+
Sbjct: 181 Y 181
>gi|290999088|ref|XP_002682112.1| ras family small GTPase [Naegleria gruberi]
gi|284095738|gb|EFC49368.1| ras family small GTPase [Naegleria gruberi]
Length = 195
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 117/185 (63%), Gaps = 2/185 (1%)
Query: 101 LKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
+K+ +LGD Q+GKTS VKYV G E + G+N + K + ++ + IWD+GG
Sbjct: 10 VKVGMLGDVQVGKTSLMVKYVNGKFDEDYIMTLGVNFLEKKVQIKNTEVNLMIWDLGGQK 69
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
+ + C D++A+ FMFDLT + TL S+ W+ +RK+N+ A+P LIGTK+D FV L
Sbjct: 70 EFMSMLDLVCNDSLALFFMFDLTRKQTLRSVKDWFLHSRKYNKRALPFLIGTKYDKFVDL 129
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGE 278
P + Q I QAR YA+ MK L + SA IN+ K+FK ++AK+F+ P ++ + IGE
Sbjct: 130 PKEDQEDITAQARKYAEKMKCPLIYCSAAAGINIKKLFKLVLAKVFDFPPSIDKITAIGE 189
Query: 279 PIIDF 283
PI+++
Sbjct: 190 PILEY 194
>gi|260951005|ref|XP_002619799.1| hypothetical protein CLUG_00958 [Clavispora lusitaniae ATCC 42720]
gi|238847371|gb|EEQ36835.1| hypothetical protein CLUG_00958 [Clavispora lusitaniae ATCC 42720]
Length = 176
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 112/166 (67%), Gaps = 1/166 (0%)
Query: 117 VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAIL 175
VKYV G+ E +Q G+N ++K + ++ I FSIWD+GG + +P+ DAVAIL
Sbjct: 2 VKYVEGSFDEDYIQTLGVNFMDKKIQIRSTNITFSIWDLGGQKEFINMLPLVSNDAVAIL 61
Query: 176 FMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAK 235
FMFDLT + TLNSI WY + R +N+TAIP L+GTK+D+F+ L P Q I QA+ + +
Sbjct: 62 FMFDLTRKSTLNSIKEWYRQVRGFNKTAIPFLVGTKYDEFIDLQPQDQLEITQQAKRFGR 121
Query: 236 AMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPII 281
AM+A + F S +H+INV KIFK I++K F+L ++ + +GEPI+
Sbjct: 122 AMRAPVIFCSTSHSINVQKIFKIILSKAFDLKLNIEEIVNVGEPIL 167
>gi|393230001|gb|EJD37613.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 449
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 116/167 (69%), Gaps = 2/167 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ V+ I FSIWD+GG
Sbjct: 127 VVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTITVRRTTITFSIWDLGG 186
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDL+ + TLNS+ WY +AR +N+TAIP L+GTKFD F
Sbjct: 187 QREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLVGTKFDVFS 246
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
P D Q I QA+ +A+AMKA+L F S + +INV KIFK ++AK+
Sbjct: 247 TFPRDEQEEITKQAKRFARAMKASLIFCSTSTSINVQKIFKIVLAKV 293
>gi|149243794|ref|XP_001526528.1| septum-promoting GTP-binding protein 1 [Lodderomyces elongisporus
NRRL YB-4239]
gi|146448922|gb|EDK43178.1| septum-promoting GTP-binding protein 1 [Lodderomyces elongisporus
NRRL YB-4239]
Length = 170
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 111/168 (66%), Gaps = 1/168 (0%)
Query: 117 VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAIL 175
VKYV G+ E +Q G+N ++K + ++ I FSIWD+GG + +P+ DAVAIL
Sbjct: 2 VKYVEGSFDEDYIQTLGVNFMDKRIQIRNTTIMFSIWDLGGQKEFINMLPLVSNDAVAIL 61
Query: 176 FMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAK 235
FMFDLT + TLNSI WY + R +N+TAIP L+GTK+D F+ LP Q I QA+ +
Sbjct: 62 FMFDLTRKSTLNSIKEWYRQVRGFNKTAIPFLVGTKYDQFIDLPFQDQIEITQQAKKFGA 121
Query: 236 AMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
AMKA + F S +H+INV KIFK I++K F++ ++ + +GEPI+ F
Sbjct: 122 AMKAPVIFCSTSHSINVQKIFKIILSKAFDIRLNLEEIVNVGEPILIF 169
>gi|320587722|gb|EFX00197.1| GTP-binding protein [Grosmannia clavigera kw1407]
Length = 495
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 108/172 (62%), Gaps = 22/172 (12%)
Query: 99 VSLKISLLGDCQIGKTSFVKYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
V +K+ ++GD QIGKTS + + N + I FSIWD+GG
Sbjct: 111 VVIKVGMVGDAQIGKTSLMVNIRNTE----------------------ITFSIWDLGGQR 148
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIPIL+GTK+D FV
Sbjct: 149 EFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDHFVNF 208
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTV 270
P + Q I+ QAR +AKAM+A L FSS +H+ NV KIFK +++K F+L T+
Sbjct: 209 PREDQEEISNQARRFAKAMRAALIFSSTSHSNNVQKIFKIVLSKAFDLKCTI 260
>gi|255714264|ref|XP_002553414.1| KLTH0D16236p [Lachancea thermotolerans]
gi|238934794|emb|CAR22976.1| KLTH0D16236p [Lachancea thermotolerans CBS 6340]
Length = 225
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 119/186 (63%), Gaps = 2/186 (1%)
Query: 100 SLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
+LKI L+GD Q+GKTS VKYV N E Q G+N ++K + + A I F I D+GG
Sbjct: 20 TLKIGLIGDAQVGKTSLMVKYVENVFDEEYTQTLGVNCLSKKITLGSADILFYIMDLGGQ 79
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVR 217
+ +P+A + A AI+F+FDLT TL SI W+ +A +N+ A+P+L+GTK+D FV
Sbjct: 80 REFINMLPLASEGAKAIIFLFDLTRPETLKSIKEWHRQATGFNEQAVPLLVGTKYDLFVN 139
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIG 277
L P+ Q I+ Q+ YA+AM A L F S +H+INV KIFK ++AKL+NL IG
Sbjct: 140 LDPEYQAQISKQSMRYAQAMDAPLIFCSTSHSINVQKIFKIVIAKLYNLTMRASEIKQIG 199
Query: 278 EPIIDF 283
+P++ +
Sbjct: 200 DPLLIY 205
>gi|238879215|gb|EEQ42853.1| septum-promoting GTP-binding protein 1 [Candida albicans WO-1]
Length = 170
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 108/166 (65%), Gaps = 1/166 (0%)
Query: 117 VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAIL 175
VKYV G+ E +Q G+N ++K + ++ I FSIWD+GG + +P+ DAVAIL
Sbjct: 2 VKYVEGSFDEDYIQTLGVNFMDKKIQIRNTTITFSIWDLGGQKEFINMLPLVSNDAVAIL 61
Query: 176 FMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAK 235
FMFDLT + TLNSI WY + R +N+TAIP L+GTK+D F+ L Q I QA+ +
Sbjct: 62 FMFDLTRKSTLNSIKEWYRQVRGFNKTAIPFLVGTKYDQFIDLSFQDQIEITQQAKKFGS 121
Query: 236 AMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPII 281
AMKA + F S +H+INV KIFK I++K F+L + + +GEPI+
Sbjct: 122 AMKAPVIFCSTSHSINVQKIFKIILSKAFDLKLNLDEIVNVGEPIL 167
>gi|50303633|ref|XP_451758.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640890|emb|CAH02151.1| KLLA0B05038p [Kluyveromyces lactis]
Length = 223
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 116/185 (62%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ L+GD Q+GKTS VKYV N E Q G++ + + +++ + FSI D+GG
Sbjct: 15 VKVKVGLIGDAQVGKTSLMVKYVQNVFDEEYTQTLGVHYLERKVVLGSTDVIFSIMDLGG 74
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ + AVAI+F+FDLT TLNSI WY +AR +N TAI IL+GTK+D FV
Sbjct: 75 QREFINMLPLVSEGAVAIVFLFDLTRPETLNSIKEWYRQARGFNDTAISILVGTKYDLFV 134
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
+ P+ Q ++ A YA+ MK+ L F S +INV KIFK ++AK FNL V I
Sbjct: 135 DMDPEYQENVSRTAMKYAQVMKSPLIFCSTQSSINVQKIFKVVIAKAFNLTLKVPEYKQI 194
Query: 277 GEPII 281
GEP++
Sbjct: 195 GEPLL 199
>gi|443915273|gb|ELU36795.1| small monomeric GTPase [Rhizoctonia solani AG-1 IA]
Length = 307
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 120/205 (58%), Gaps = 28/205 (13%)
Query: 95 DSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQM---------------AGLNLIN 137
+ + V +K+ ++GD QIGKTS VKYV G+ E +Q G+N +
Sbjct: 21 EKNSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGMYLYPFSDVRSPPPGVNFME 80
Query: 138 KTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR 197
KT+ V+ I FSIWD+GG + +P+ C DAVAILFMFDLT + TLNS+ WY
Sbjct: 81 KTISVRRTTITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSVKEWY---- 136
Query: 198 KWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 257
QTAIP LIGTKFD F P D Q I QA+ +AKAM A+L FSS + +INV KIFK
Sbjct: 137 --RQTAIPFLIGTKFDTFSTFPRDEQEEITKQAKRFAKAMHASLIFSSTSASINVQKIFK 194
Query: 258 FIMAK-----LFNLPWTVKRNLTIG 277
++AK L P K N+++G
Sbjct: 195 IVLAKVRRNDLLAYPLVFKCNVSLG 219
>gi|255730243|ref|XP_002550046.1| septum-promoting GTP-binding protein 1 [Candida tropicalis
MYA-3404]
gi|240132003|gb|EER31561.1| septum-promoting GTP-binding protein 1 [Candida tropicalis
MYA-3404]
Length = 170
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 108/166 (65%), Gaps = 1/166 (0%)
Query: 117 VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAIL 175
VKYV G+ + +Q G+N ++K + ++ I FSIWD+GG + +PI DAVAIL
Sbjct: 2 VKYVEGSFNDDYIQTLGVNFMDKKIQIKNTTITFSIWDLGGQKEFTNMLPIVSNDAVAIL 61
Query: 176 FMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAK 235
FMFDLT + TLNSI WY + R +N+TAIP L+GTK+D F+ L Q I QA+ +
Sbjct: 62 FMFDLTRKSTLNSIKEWYRQVRGFNKTAIPFLVGTKYDQFIDLSFQDQIEITQQAKKFGT 121
Query: 236 AMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPII 281
AMKA + F S +H+INV KIFK I++K F+L + + +GEPI+
Sbjct: 122 AMKAPVIFCSTSHSINVQKIFKIILSKAFDLKLKLDQIENVGEPIL 167
>gi|190348198|gb|EDK40610.2| hypothetical protein PGUG_04708 [Meyerozyma guilliermondii ATCC
6260]
Length = 170
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 107/166 (64%), Gaps = 1/166 (0%)
Query: 117 VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAIL 175
VKYV G E +Q G+N ++K + ++ I FSIWD+GG + +P+ DAVAIL
Sbjct: 2 VKYVEGAFDEDYIQTLGVNFMDKKIQIRNTTITFSIWDLGGQKEFINMLPLVSNDAVAIL 61
Query: 176 FMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAK 235
FMFDLT + TLNSI WY + R +N+TAIP L+GTK+D F+ Q I QA+ +
Sbjct: 62 FMFDLTRKSTLNSIKEWYRQVRGFNKTAIPFLVGTKYDQFIDQSQQDQVEITQQAKKFGS 121
Query: 236 AMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPII 281
AM+A + F S +H+INV KIFK +++K F+L ++ + IGEPI+
Sbjct: 122 AMRAPVIFCSTSHSINVQKIFKIVLSKAFDLKLNLEEIVNIGEPIL 167
>gi|401882786|gb|EJT47030.1| small monomeric GTPase [Trichosporon asahii var. asahii CBS 2479]
Length = 196
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 112/184 (60%), Gaps = 14/184 (7%)
Query: 95 DSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIW 152
D + + LK+ ++GD QIGKTS VKYV G+ E +Q G+N + K + ++ I FSIW
Sbjct: 24 DRNAIVLKVGMVGDAQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKAITIRNTEITFSIW 83
Query: 153 DVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKF 212
D+GG +P+ DAVAILFMFDLT + TLNS+ WY +AR +N+TAIP+LIGTK+
Sbjct: 84 DLGGQREFVSMLPLVSNDAVAILFMFDLTRKSTLNSVKEWYRQARGFNKTAIPVLIGTKY 143
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKR 272
D F P + Q I QA+ +AKAM A L KIFK ++AK F+L V
Sbjct: 144 DIFASYPREEQEEITKQAKRFAKAMHAPL------------KIFKIVLAKAFDLKVRVTM 191
Query: 273 NLTI 276
L I
Sbjct: 192 QLDI 195
>gi|146413565|ref|XP_001482753.1| hypothetical protein PGUG_04708 [Meyerozyma guilliermondii ATCC
6260]
Length = 170
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 106/166 (63%), Gaps = 1/166 (0%)
Query: 117 VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAIL 175
VKYV G E +Q G+N ++K + ++ I FSIWD+GG + +P+ DAVAIL
Sbjct: 2 VKYVEGAFDEDYIQTLGVNFMDKKIQIRNTTITFSIWDLGGQKEFINMLPLVSNDAVAIL 61
Query: 176 FMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAK 235
FMFDLT + TLNSI WY + R +N+TAIP L+GTK+D F+ Q I QA+ +
Sbjct: 62 FMFDLTRKSTLNSIKEWYRQVRGFNKTAIPFLVGTKYDQFIDQSQQDQVEITQQAKKFGS 121
Query: 236 AMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPII 281
AM+A + F S +H INV KIFK +++K F+L ++ + IGEPI+
Sbjct: 122 AMRAPVIFCSTSHLINVQKIFKIVLSKAFDLKLNLEEIVNIGEPIL 167
>gi|440798952|gb|ELR20013.1| GTP binding protein [Acanthamoeba castellanii str. Neff]
Length = 215
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 131/223 (58%), Gaps = 13/223 (5%)
Query: 63 TRRSSSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVG 121
T+RSS P P + G D +++V +K+ ++GD ++GKTS VKYV
Sbjct: 4 TKRSSL---PQPKQTNTTCKMADKYKRKGKDGKNEVV-IKVGMVGDSEVGKTSLMVKYVE 59
Query: 122 NE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDL 180
N+ E + G+N + KT+ + I+FSIWD+GG +P+ C+DA AILFMFDL
Sbjct: 60 NKFDEDYICTLGVNFMEKTVTLGKNEISFSIWDLGGSREFITMLPLVCEDAEAILFMFDL 119
Query: 181 TSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKAT 240
T + TL S+ R+ +TA P LIGTK+D F + + Q I QAR +AKAMKA
Sbjct: 120 TRKSTLISV-------REHTKTARPFLIGTKYDLFAQKEQEEQEEITKQARKFAKAMKAP 172
Query: 241 LFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
L F SA +INV KIFK ++AK F L T++ +GEPI+++
Sbjct: 173 LIFCSAHSSINVQKIFKIVLAKAFELKCTIEPITKVGEPILEY 215
>gi|452824023|gb|EME31029.1| small GTP-binding protein of Rab family [Galdieria sulphuraria]
Length = 184
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 107/158 (67%), Gaps = 2/158 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
+ +K +L+GD +GKTS VKYV G E +Q G+N + K + V+ I FSIWD+GG
Sbjct: 22 IVVKTALIGDPFVGKTSLMVKYVEGKFDEDYIQTLGVNFMEKNIYVKNLEITFSIWDLGG 81
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+P+A D VAI+FMFDLT + TL ++ WY ++R +N++A+P L+GTKFD F+
Sbjct: 82 QKDFVTMLPLALSDTVAIVFMFDLTRKITLQNVKEWYRQSRIYNKSALPFLVGTKFDGFI 141
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNK 254
LP + Q TI Q+R +A+AMKA L FSSA+H+INV K
Sbjct: 142 TLPKEEQITIIEQSRKFARAMKAPLIFSSASHSINVQK 179
>gi|342881725|gb|EGU82557.1| hypothetical protein FOXB_06923 [Fusarium oxysporum Fo5176]
Length = 267
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/239 (37%), Positives = 128/239 (53%), Gaps = 40/239 (16%)
Query: 53 KQPAVRYQKLTRRSSSESSPAPDTMEAGLVELSRTFSSGYDTDS--------DLVSLKIS 104
+ P+ RY + + S PA +GL + + Y S + V +K+
Sbjct: 54 EDPSTRYTPPVQTAPPISRPA-----SGLSNPAHQAYNDYRQSSGEPSSNGRNHVVIKVG 108
Query: 105 LLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFD 162
++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG +
Sbjct: 109 MVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVN 168
Query: 163 HVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDL 222
+P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIPIL+GTK+D FV PP
Sbjct: 169 MLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDHFVNFPPQD 228
Query: 223 QWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPII 281
Q I+ N+IFK +++K F+L T+ +GEP++
Sbjct: 229 QEEIS-------------------------NQIFKIVLSKAFDLKCTIPEIENVGEPLL 262
>gi|46130840|ref|XP_389151.1| hypothetical protein FG08975.1 [Gibberella zeae PH-1]
Length = 267
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 126/230 (54%), Gaps = 34/230 (14%)
Query: 54 QPAVRYQKLTRRSSSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGK 113
QPA L+R +S S+PA S+G + V +K+ ++GD QIGK
Sbjct: 65 QPA---PPLSRPASGLSNPAHQAYNDYRQGAGEPSSNGRNH----VVIKVGMVGDAQIGK 117
Query: 114 TSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDA 171
TS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG + +P+ C DA
Sbjct: 118 TSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVCNDA 177
Query: 172 VAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQAR 231
VAILFMFDLT + TLNSI WY + R +N+TAIPIL+GTK+D FV PP Q I+
Sbjct: 178 VAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDHFVNFPPQDQEEIS---- 233
Query: 232 AYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPII 281
N+IFK +++K F+L T+ +GEP++
Sbjct: 234 ---------------------NQIFKIVLSKAFDLKCTIPEIENVGEPLL 262
>gi|302896418|ref|XP_003047089.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256728017|gb|EEU41376.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 265
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 127/239 (53%), Gaps = 40/239 (16%)
Query: 53 KQPAVRYQKLTRRSSSESSPAPDTMEAGLVELSRTFSSGY--------DTDSDLVSLKIS 104
+ P+ RY + + S PA +GL + + Y + V +K+
Sbjct: 52 EDPSARYTPPVQPAPPISRPA-----SGLSNPAHQAYNDYRQGAGEPSSNGRNHVVIKVG 106
Query: 105 LLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFD 162
++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG +
Sbjct: 107 MVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVN 166
Query: 163 HVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDL 222
+P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIPIL+GTK+D FV PP
Sbjct: 167 MLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDHFVNFPPQD 226
Query: 223 QWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPII 281
Q I+ N+IFK +++K F+L T+ +GEP++
Sbjct: 227 QEEIS-------------------------NQIFKIVLSKAFDLKCTIPEIENVGEPLL 260
>gi|367012774|ref|XP_003680887.1| hypothetical protein TDEL_0D00920 [Torulaspora delbrueckii]
gi|359748547|emb|CCE91676.1| hypothetical protein TDEL_0D00920 [Torulaspora delbrueckii]
Length = 229
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 115/185 (62%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +++ L+GD Q+GKTS VKYV N E Q G+N + + + ++ I FS+ D+GG
Sbjct: 17 VDVQVGLVGDAQVGKTSLMVKYVQNVFDEEYTQTLGVNFLKRKVSIRSTDIVFSLMDLGG 76
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +PIA + AI+F+FDLT TL+SI WY +A N+TA+P+L+GTK+D FV
Sbjct: 77 QREFINMLPIASLGSSAIVFLFDLTRPETLSSIKEWYRQAHGLNETAVPLLVGTKYDLFV 136
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L P+ Q ++ + YA+ M A L F S +INV KIFK +AK+F L TV+ +
Sbjct: 137 DLDPEYQEQLSRTSMEYAQVMDAPLIFCSTAKSINVQKIFKIALAKIFKLTLTVQEINDV 196
Query: 277 GEPII 281
G+P++
Sbjct: 197 GDPLL 201
>gi|156842204|ref|XP_001644471.1| hypothetical protein Kpol_520p36 [Vanderwaltozyma polyspora DSM
70294]
gi|156115114|gb|EDO16613.1| hypothetical protein Kpol_520p36 [Vanderwaltozyma polyspora DSM
70294]
Length = 225
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 112/185 (60%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
+ ++I L+GD Q+GKTS VKYV N + Q G+N + + + V+ I FSI D+GG
Sbjct: 13 IEVQIGLVGDAQVGKTSLMVKYVQNIFNDEYTQTLGVNFLKRKVSVRSTDIVFSILDLGG 72
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +PIA + AI+F+FDLT TLNSI WY +A N AIPIL+GTK+D F+
Sbjct: 73 QKEFINMLPIASIGSSAIIFLFDLTRPETLNSIKEWYRQANGLNDQAIPILVGTKYDLFI 132
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L Q I+ A YA+ M A L F+S +INV KIFK ++K+FNL T+ I
Sbjct: 133 DLDQSTQEKISRIAMQYAQVMNAPLIFTSTAKSINVQKIFKIALSKIFNLTLTISEINEI 192
Query: 277 GEPII 281
G+P++
Sbjct: 193 GDPLL 197
>gi|366999086|ref|XP_003684279.1| hypothetical protein TPHA_0B01720 [Tetrapisispora phaffii CBS 4417]
gi|357522575|emb|CCE61845.1| hypothetical protein TPHA_0B01720 [Tetrapisispora phaffii CBS 4417]
Length = 296
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 116/187 (62%), Gaps = 2/187 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +++ L+GD Q+GKTS VKYV N E Q G+N + +T+ V+ I FS+ D+GG
Sbjct: 26 VEIQVGLIGDAQVGKTSLMVKYVQNIFNEEYTQTLGVNFLKRTVSVRSTDIVFSLLDLGG 85
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +PIA + AI+F+FDLT TLNSI WY +A N+ AIPIL+GTK+D F+
Sbjct: 86 QKEFINMLPIATVGSAAIVFLFDLTRPETLNSIKNWYRQANGLNEMAIPILVGTKYDLFI 145
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L + Q +I+ + A+ M + L F S + +INV KIFK ++K+FNL T+ I
Sbjct: 146 NLDKEHQDSISRLSMEIAQVMDSPLVFCSTSKSINVQKIFKIALSKIFNLTLTIPEINEI 205
Query: 277 GEPIIDF 283
G+P++ +
Sbjct: 206 GDPLLIY 212
>gi|366987563|ref|XP_003673548.1| hypothetical protein NCAS_0A06070 [Naumovozyma castellii CBS 4309]
gi|342299411|emb|CCC67165.1| hypothetical protein NCAS_0A06070 [Naumovozyma castellii CBS 4309]
Length = 225
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 108/185 (58%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V L+I L+GD Q+GKTS VKYV N E Q G+N + + + + I FS+ D+GG
Sbjct: 19 VDLQIGLVGDAQVGKTSLMVKYVQNIFDEEYTQTLGVNFLKRKVKLHSTDIVFSLMDLGG 78
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +PIA + I+F+FDLT TLNSI WY + + N AIPIL+GTK+D +
Sbjct: 79 QKEFINMLPIAAVGSSVIVFLFDLTRPETLNSIKDWYRQVKGLNDIAIPILVGTKYDLLI 138
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L + Q I+T A YA M A L F S +INV KIFK +AK+FNL V I
Sbjct: 139 NLSAEYQEQISTAAIDYANVMDAPLIFCSTAESINVQKIFKIALAKIFNLTLVVPEIRDI 198
Query: 277 GEPII 281
G+P++
Sbjct: 199 GDPLL 203
>gi|401624465|gb|EJS42522.1| tem1p [Saccharomyces arboricola H-6]
Length = 245
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 114/187 (60%), Gaps = 2/187 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNEQERSL-QMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +++ L+GD Q+GKTS VKYV N ++ Q G+N + + + ++ I FSI D+GG
Sbjct: 19 VEVQVGLVGDAQVGKTSLMVKYVQNIYDKEYTQTLGVNFLKRKVSIRSTDIVFSIMDLGG 78
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +PIA + I+F+FDLT TL+SI WY +A N +AIPIL+GTK+D +
Sbjct: 79 QREFINMLPIATVGSSVIIFLFDLTRPETLSSIKEWYRQAYGLNDSAIPILVGTKYDLLI 138
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L P+ Q I+ + YA+ M A L F S +IN+ KIFK +AK+FNL T+ I
Sbjct: 139 DLDPEYQEQISRTSMKYAQVMNAPLIFCSTAKSINIQKIFKIALAKIFNLTLTIPEINEI 198
Query: 277 GEPIIDF 283
G+P++ +
Sbjct: 199 GDPLLIY 205
>gi|429861946|gb|ELA36609.1| septum-promoting gtp-binding protein 1 [Colletotrichum
gloeosporioides Nara gc5]
Length = 277
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 110/185 (59%), Gaps = 27/185 (14%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 113 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 172
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIPIL+GTK+D FV
Sbjct: 173 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDHFV 232
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ N+IFK +++K F+L T+ +
Sbjct: 233 NFPREDQEEIS-------------------------NQIFKIVLSKAFDLKCTIPEIENV 267
Query: 277 GEPII 281
GEP++
Sbjct: 268 GEPLL 272
>gi|225561620|gb|EEH09900.1| septum-promoting GTP-binding protein [Ajellomyces capsulatus
G186AR]
Length = 348
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 108/185 (58%), Gaps = 27/185 (14%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 183 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 242
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP LIGTK+D FV
Sbjct: 243 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKYDHFV 302
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ Q IFK +++K F+L T+ I
Sbjct: 303 NFPREDQEEISIQ-------------------------IFKIVLSKAFDLKCTIPEIENI 337
Query: 277 GEPII 281
GEP++
Sbjct: 338 GEPLL 342
>gi|296816190|ref|XP_002848432.1| septum-promoting GTP-binding protein 1 [Arthroderma otae CBS
113480]
gi|238841457|gb|EEQ31119.1| septum-promoting GTP-binding protein 1 [Arthroderma otae CBS
113480]
Length = 358
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 108/185 (58%), Gaps = 27/185 (14%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 194 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 253
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D FV
Sbjct: 254 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 313
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ Q IFK +++K F+L T+ I
Sbjct: 314 NFPREDQEEISIQ-------------------------IFKIVLSKAFDLKCTIPEIENI 348
Query: 277 GEPII 281
GEP++
Sbjct: 349 GEPLL 353
>gi|401842934|gb|EJT44931.1| TEM1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 245
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 114/187 (60%), Gaps = 2/187 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNEQERSL-QMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +++ L+GD Q+GKTS VKYV N ++ Q G+N + + + ++ I FSI D+GG
Sbjct: 19 VEVQVGLVGDAQVGKTSLMVKYVQNIYDKEYTQTLGVNFLKRKVSIRSTDIIFSIMDLGG 78
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +PIA + I+F+FDLT TL+SI WY +A N +AIPIL+GTK+D +
Sbjct: 79 QREFINMLPIATVGSSVIIFLFDLTRPETLSSIKEWYRQAYGLNDSAIPILVGTKYDLLI 138
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L P+ Q I+ + YA+ M A L F S +IN+ KIFK +AK+FNL T+ I
Sbjct: 139 DLDPEYQEQISGTSMKYAQVMNAPLIFCSTAKSINIQKIFKIALAKIFNLTLTIPEINEI 198
Query: 277 GEPIIDF 283
G+P++ +
Sbjct: 199 GDPLLIY 205
>gi|365759134|gb|EHN00941.1| Tem1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 245
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 114/187 (60%), Gaps = 2/187 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNEQERSL-QMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +++ L+GD Q+GKTS VKYV N ++ Q G+N + + + ++ I FSI D+GG
Sbjct: 19 VEVQVGLVGDAQVGKTSLMVKYVQNIYDKEYTQTLGVNFLKRKVSIRSTDIIFSIMDLGG 78
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +PIA + I+F+FDLT TL+SI WY +A N +AIPIL+GTK+D +
Sbjct: 79 QREFINMLPIATVGSSVIIFLFDLTRPETLSSIKEWYRQAYGLNDSAIPILVGTKYDLLI 138
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L P+ Q I+ + YA+ M A L F S +IN+ KIFK +AK+FNL T+ I
Sbjct: 139 DLDPEYQEQISGTSMKYAQVMNAPLIFCSTAKSINIQKIFKIALAKIFNLTLTIPEINEI 198
Query: 277 GEPIIDF 283
G+P++ +
Sbjct: 199 GDPLLIY 205
>gi|256269741|gb|EEU05008.1| Tem1p [Saccharomyces cerevisiae JAY291]
Length = 245
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 114/187 (60%), Gaps = 2/187 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNEQERSL-QMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +++ L+GD Q+GKTS VKYV N ++ Q G+N + + + ++ I FSI D+GG
Sbjct: 19 VEVQVGLVGDAQVGKTSLMVKYVQNIYDKEYTQTLGVNFLKRKVSIRSTDIIFSIMDLGG 78
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +PIA + I+F+FDLT TL+SI WY +A N +AIPIL+GTK+D +
Sbjct: 79 QREFINMLPIATVGSSVIIFLFDLTRPETLSSIKEWYRQAYGLNDSAIPILVGTKYDLLI 138
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L P+ Q I+ + YA+ M A L F S +IN+ KIFK +AK+FNL T+ I
Sbjct: 139 DLDPEYQEQISRTSMKYAQVMNAPLIFCSTAKSINIQKIFKIALAKIFNLTLTIPEINEI 198
Query: 277 GEPIIDF 283
G+P++ +
Sbjct: 199 GDPLLIY 205
>gi|254579148|ref|XP_002495560.1| ZYRO0B14256p [Zygosaccharomyces rouxii]
gi|238938450|emb|CAR26627.1| ZYRO0B14256p [Zygosaccharomyces rouxii]
Length = 227
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 112/185 (60%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V ++I L+GD Q+GKTS VKYV N E Q G+N + + + ++ I FSI D+GG
Sbjct: 28 VEVQIGLVGDAQVGKTSLMVKYVQNVFDEEYTQTLGVNFLKRKVSIRSTDIIFSIMDLGG 87
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +PIA + A++F+FDLT TL SI WY +A N+ AIP+L+GTK+D FV
Sbjct: 88 QREFINMLPIASLGSSALVFLFDLTRPETLTSIKEWYRQAHGLNEGAIPVLVGTKYDLFV 147
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L P Q ++ + YA+ M A L F S +INV KIFK +AK+F+L TV I
Sbjct: 148 DLDPVYQEQLSRASMEYAQVMDAPLIFCSTAKSINVQKIFKVALAKIFSLTLTVPEINEI 207
Query: 277 GEPII 281
G+P++
Sbjct: 208 GDPLL 212
>gi|226294186|gb|EEH49606.1| septum-promoting GTP-binding protein [Paracoccidioides brasiliensis
Pb18]
Length = 328
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 108/185 (58%), Gaps = 27/185 (14%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 163 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 222
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP LIGTK+D FV
Sbjct: 223 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKYDHFV 282
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ Q IFK +++K F+L T+ I
Sbjct: 283 NFPREDQEEISIQ-------------------------IFKIVLSKAFDLKCTIPEIENI 317
Query: 277 GEPII 281
GEP++
Sbjct: 318 GEPLL 322
>gi|45190737|ref|NP_984991.1| AER132Wp [Ashbya gossypii ATCC 10895]
gi|44983716|gb|AAS52815.1| AER132Wp [Ashbya gossypii ATCC 10895]
gi|374108214|gb|AEY97121.1| FAER132Wp [Ashbya gossypii FDAG1]
Length = 232
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 113/187 (60%), Gaps = 2/187 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +KI L+GD Q+GKTS VKYV N E Q G++ + + + + + FSI D+GG
Sbjct: 14 VKIKIGLIGDAQVGKTSLMVKYVQNVFDEEYTQTLGVHYLERKINLGSTDVIFSIMDLGG 73
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ AVAI+F+FDLT TL SI WY +AR +N+TAIP+L+GTK+D FV
Sbjct: 74 QREFINMLPLVSNRAVAIIFLFDLTRPETLTSIREWYRQARGFNETAIPLLVGTKYDLFV 133
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L Q ++ + YA+ M A L F S +INV KIFK I+AK FNL + +
Sbjct: 134 NLDVAYQEELSKTSMRYAQVMGAPLVFCSTASSINVQKIFKVIIAKAFNLTLRIPEIKDM 193
Query: 277 GEPIIDF 283
G+P++ +
Sbjct: 194 GDPLLIY 200
>gi|6323576|ref|NP_013647.1| Tem1p [Saccharomyces cerevisiae S288c]
gi|730928|sp|P38987.1|TEM1_YEAST RecName: Full=Protein TEM1
gi|537606|dbj|BAA07371.1| GTP-binding protein Tem1p [Saccharomyces cerevisiae]
gi|558411|emb|CAA86257.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45269852|gb|AAS56306.1| YML064C [Saccharomyces cerevisiae]
gi|151946100|gb|EDN64331.1| GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190408179|gb|EDV11444.1| protein TEM1 [Saccharomyces cerevisiae RM11-1a]
gi|259148512|emb|CAY81757.1| Tem1p [Saccharomyces cerevisiae EC1118]
gi|285813938|tpg|DAA09833.1| TPA: Tem1p [Saccharomyces cerevisiae S288c]
gi|323303640|gb|EGA57428.1| Tem1p [Saccharomyces cerevisiae FostersB]
gi|323307816|gb|EGA61078.1| Tem1p [Saccharomyces cerevisiae FostersO]
gi|323352962|gb|EGA85262.1| Tem1p [Saccharomyces cerevisiae VL3]
gi|349580224|dbj|GAA25384.1| K7_Tem1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763689|gb|EHN05215.1| Tem1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392297519|gb|EIW08619.1| Tem1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 245
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 114/187 (60%), Gaps = 2/187 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNEQERSL-QMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +++ L+GD Q+GKTS VKYV N ++ Q G+N + + + ++ I FSI D+GG
Sbjct: 19 VEVQVGLVGDAQVGKTSLMVKYVQNIYDKEYTQTLGVNFLKRKVSIRSTDIIFSIMDLGG 78
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +PIA + I+F+FDLT TL+SI WY +A N +AIPIL+GTK+D +
Sbjct: 79 QREFINMLPIATVGSSVIIFLFDLTRPETLSSIKEWYRQAYGLNDSAIPILVGTKYDLLI 138
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L P+ Q I+ + YA+ M A L F S +IN+ KIFK +AK+FNL T+ I
Sbjct: 139 DLDPEYQEQISRTSMKYAQVMNAPLIFCSTAKSINIQKIFKIALAKIFNLTLTIPEINEI 198
Query: 277 GEPIIDF 283
G+P++ +
Sbjct: 199 GDPLLIY 205
>gi|261189809|ref|XP_002621315.1| septum-promoting GTP-binding protein 1 [Ajellomyces dermatitidis
SLH14081]
gi|239591551|gb|EEQ74132.1| septum-promoting GTP-binding protein 1 [Ajellomyces dermatitidis
SLH14081]
Length = 336
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 108/185 (58%), Gaps = 27/185 (14%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 171 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 230
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP LIGTK+D FV
Sbjct: 231 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKYDHFV 290
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ Q IFK +++K F+L T+ I
Sbjct: 291 NFPREDQEEISIQ-------------------------IFKIVLSKAFDLKCTIPEIENI 325
Query: 277 GEPII 281
GEP++
Sbjct: 326 GEPLL 330
>gi|295664480|ref|XP_002792792.1| septum-promoting GTP-binding protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226278906|gb|EEH34472.1| septum-promoting GTP-binding protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 328
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 108/185 (58%), Gaps = 27/185 (14%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 163 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 222
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP LIGTK+D FV
Sbjct: 223 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKYDHFV 282
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ Q IFK +++K F+L T+ I
Sbjct: 283 NFPREDQEEISIQ-------------------------IFKIVLSKAFDLKCTIPEIENI 317
Query: 277 GEPII 281
GEP++
Sbjct: 318 GEPLL 322
>gi|239612920|gb|EEQ89907.1| septum-promoting GTP-binding protein 1 [Ajellomyces dermatitidis
ER-3]
Length = 336
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 108/185 (58%), Gaps = 27/185 (14%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 171 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 230
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP LIGTK+D FV
Sbjct: 231 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKYDHFV 290
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
P + Q I+ Q IFK +++K F+L T+ I
Sbjct: 291 NFPREDQEEISIQ-------------------------IFKIVLSKAFDLKCTIPEIENI 325
Query: 277 GEPII 281
GEP++
Sbjct: 326 GEPLL 330
>gi|207342544|gb|EDZ70280.1| YML064Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 245
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 113/187 (60%), Gaps = 2/187 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNEQERSL-QMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +++ L+GD Q+GKTS VKYV N ++ Q G+N + + + ++ I FSI D+GG
Sbjct: 19 VEVQVGLVGDAQVGKTSLMVKYVQNIYDKEYTQTLGVNFLKRKVSIRSTDIIFSIMDLGG 78
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +PIA + I+F+FDLT TL SI WY +A N +AIPIL+GTK+D +
Sbjct: 79 QREFINMLPIATVGSSVIIFLFDLTRPETLGSIKEWYRQAYGLNDSAIPILVGTKYDLLI 138
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L P+ Q I+ + YA+ M A L F S +IN+ KIFK +AK+FNL T+ I
Sbjct: 139 DLDPEYQEQISRTSMKYAQVMNAPLIFCSTAKSINIQKIFKIALAKIFNLTLTIPEINEI 198
Query: 277 GEPIIDF 283
G+P++ +
Sbjct: 199 GDPLLIY 205
>gi|449016255|dbj|BAM79657.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 298
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 111/177 (62%), Gaps = 2/177 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
++LK+ ++GD GKTS V+Y G+ E + G+N + +++ ++ I FS+WD+GG
Sbjct: 111 LTLKVGMVGDAGCGKTSLMVRYCEGHFDEDYIMTLGVNFLERSVSLRHTDIVFSVWDLGG 170
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
S +P+ DA A+LF+FDLT + TL SI WY + R N TA+PIL+G K+D F+
Sbjct: 171 QSEFRTMLPLVTSDAAAMLFIFDLTRKTTLISIRDWYQQVRLLNVTAVPILVGNKYDLFI 230
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRN 273
L D Q +I +AR YA+AM A L F SA+H + V ++FK ++ +LF+L +R
Sbjct: 231 SLAADQQASIVRRARKYARAMHAPLVFCSASHCVQVQRVFKLVLVRLFDLQPAFERQ 287
>gi|406700563|gb|EKD03729.1| small monomeric GTPase [Trichosporon asahii var. asahii CBS 8904]
Length = 191
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 98/149 (65%), Gaps = 2/149 (1%)
Query: 95 DSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIW 152
D + + LK+ ++GD QIGKTS VKYV G+ E +Q G+N + K + ++ I FSIW
Sbjct: 24 DRNAIVLKVGMVGDAQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKAITIRNTEITFSIW 83
Query: 153 DVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKF 212
D+GG +P+ DAVAILFMFDLT + TLNS+ WY +AR +N+TAIP+LIGTK+
Sbjct: 84 DLGGQREFVSMLPLVSNDAVAILFMFDLTRKSTLNSVKEWYRQARGFNKTAIPVLIGTKY 143
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATL 241
D F P + Q I QA+ +AKAM A L
Sbjct: 144 DIFASYPREEQEEITKQAKRFAKAMHAPL 172
>gi|323336176|gb|EGA77447.1| Tem1p [Saccharomyces cerevisiae Vin13]
gi|323347072|gb|EGA81347.1| Tem1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 245
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 113/187 (60%), Gaps = 2/187 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNEQERSL-QMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +++ L+GD Q+GKTS VKYV N ++ Q G+N + + + ++ I FSI D+GG
Sbjct: 19 VEVQVGLVGDAQVGKTSLMVKYVQNIYDKEYTQTLGVNFLKRKVSIRSTDIIFSIMDLGG 78
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +PIA + I+F+FDLT TL SI WY +A N +AIPIL+GTK+D +
Sbjct: 79 QREFINMLPIATVGSSVIIFLFDLTRPETLXSIKEWYRQAYGLNDSAIPILVGTKYDLLI 138
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L P+ Q I+ + YA+ M A L F S +IN+ KIFK +AK+FNL T+ I
Sbjct: 139 DLDPEYQEQISRTSMKYAQVMNAPLIFCSTAKSINIQKIFKIALAKIFNLTLTIPEINEI 198
Query: 277 GEPIIDF 283
G+P++ +
Sbjct: 199 GDPLLIY 205
>gi|363748010|ref|XP_003644223.1| hypothetical protein Ecym_1155 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887855|gb|AET37406.1| hypothetical protein Ecym_1155 [Eremothecium cymbalariae
DBVPG#7215]
Length = 233
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +KI L+GD Q+GKTS VKYV N E Q G++ + + + + + FSI D+GG
Sbjct: 14 VKIKIGLIGDAQVGKTSLMVKYVQNVFDEEYTQTLGVHYLERKINLGSTDVIFSIMDLGG 73
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ AVAI+F+FDLT TL SI WY +AR +N+TAIP+L+GTK+D V
Sbjct: 74 QREFINMLPLVSNRAVAIIFLFDLTRPETLTSIREWYRQARGFNETAIPLLVGTKYDLLV 133
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L Q ++ + YA+ M A L F S +INV KIFK ++AK FNL + I
Sbjct: 134 NLDVAYQEEVSKTSMRYAQVMGAPLIFCSTASSINVQKIFKVVIAKAFNLTLRIPEIKDI 193
Query: 277 GEPIIDF 283
G+P++ +
Sbjct: 194 GDPLLIY 200
>gi|365986058|ref|XP_003669861.1| hypothetical protein NDAI_0D03040 [Naumovozyma dairenensis CBS 421]
gi|343768630|emb|CCD24618.1| hypothetical protein NDAI_0D03040 [Naumovozyma dairenensis CBS 421]
Length = 214
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 110/187 (58%), Gaps = 2/187 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V L++ L+GD Q+GKTS VKYV N E Q G+N + + + + I +S+ D+GG
Sbjct: 19 VDLQVGLVGDAQVGKTSLMVKYVQNIFDEEYTQTLGVNYLKRKVRLHSTDIIYSLMDLGG 78
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +PIA + AI+F+FDLT TLNSI WY + N AIPIL+GTK+D F+
Sbjct: 79 QREFINMLPIAAVGSSAIIFLFDLTRPETLNSIKDWYRQVNGLNDVAIPILVGTKYDLFI 138
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L + Q I+ A Y+K M + L F S IN+ KIFK +AK+FNL + T+
Sbjct: 139 GLDSNYQNHISNSAIEYSKIMNSPLVFCSTAEGINIQKIFKIALAKIFNLTLVIPEITTV 198
Query: 277 GEPIIDF 283
G+P++ +
Sbjct: 199 GDPLLIY 205
>gi|366997510|ref|XP_003678517.1| hypothetical protein NCAS_0J02000 [Naumovozyma castellii CBS 4309]
gi|342304389|emb|CCC72179.1| hypothetical protein NCAS_0J02000 [Naumovozyma castellii CBS 4309]
Length = 223
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 120/196 (61%), Gaps = 7/196 (3%)
Query: 93 DTDSDL-----VSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGA 145
D++++L + +++ L+GD Q+GKTS VKY N E Q G+NL+ + + ++ +
Sbjct: 12 DSEANLAQPEEIQIQVGLVGDAQVGKTSLMVKYAQNGFDEEYTQTLGVNLLKRKVRIKSS 71
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP 205
I FS+ D+GG + +PIA ++ I+F+FDLT +L SI WY +A N A+
Sbjct: 72 NIVFSLMDLGGQKEFINMLPIASVNSSVIIFLFDLTRPESLESIKNWYMQAHGLNHDAVC 131
Query: 206 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
IL+GTK+D F+ LP + Q I+ + YA+AM + L FSS+ +IN+ KIFK +AK+F+
Sbjct: 132 ILVGTKYDLFIDLPTEYQEQISRTSMKYAQAMDSPLIFSSSIASINIQKIFKIALAKVFD 191
Query: 266 LPWTVKRNLTIGEPII 281
L + IG+P++
Sbjct: 192 LTLIIPEITQIGDPLL 207
>gi|50293691|ref|XP_449257.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528570|emb|CAG62231.1| unnamed protein product [Candida glabrata]
Length = 254
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 111/185 (60%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +++ L+GD Q+GKTS VKYV N E Q G+N + + + ++ I FS+ D+GG
Sbjct: 27 VDIQVGLIGDAQVGKTSLMVKYVQNIFDEEYTQTLGVNFLKRKVSIRSTDIVFSLMDLGG 86
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +PIA + I+ +FDLT TLNSI WY +A N +AIPIL+GTK+D F+
Sbjct: 87 QREFINMLPIATLGSSVIILLFDLTRPETLNSIKEWYRQALGLNDSAIPILVGTKYDLFI 146
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L + Q ++ + YA+ M A L F S +IN+ KIFK +AK+F+L T+ I
Sbjct: 147 DLEEEYQEKVSKTSMKYAQVMDAPLIFCSTAKSINIQKIFKVALAKIFDLTLTIPEINEI 206
Query: 277 GEPII 281
G+P++
Sbjct: 207 GDPLL 211
>gi|255566385|ref|XP_002524178.1| sgp1 monomeric G-protein, putative [Ricinus communis]
gi|223536547|gb|EEF38193.1| sgp1 monomeric G-protein, putative [Ricinus communis]
Length = 196
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 107/169 (63%), Gaps = 13/169 (7%)
Query: 31 RVSIFRRFFRFIWERILVCSIGKQPAVRYQKLTRRSSSESSPAP---------DTMEAGL 81
R SI RR W +IL+CS+GK ++Y L R + + A + +
Sbjct: 13 RFSILRRCILRAWNQILMCSLGK--PIQYHMLPHRLTVPTPVATIVPTSGSVSSSPTSSP 70
Query: 82 VELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKT 139
S DSDLV+LKISLLGDCQIGKTSF+ KYVGNE +E+ + G+N+++KT
Sbjct: 71 PPPPMCVSHHDHKDSDLVALKISLLGDCQIGKTSFLAKYVGNEKEEKGMLKGGMNMMDKT 130
Query: 140 LMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNS 188
LMV+GARI++++W+V GD S +P+ACKD+VAIL MFDLTSR TLN
Sbjct: 131 LMVKGARISYNLWEVDGDEGSRGQIPVACKDSVAILIMFDLTSRVTLNG 179
>gi|238036883|dbj|BAH60832.1| mutant TEM1like protein [Candida glabrata]
Length = 254
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 111/185 (60%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +++ L+GD Q+GKTS VKYV N E Q G+N + + + ++ I FS+ D+GG
Sbjct: 27 VDIQVGLIGDAQVGKTSLMVKYVQNIFDEEYTQTLGVNFLKRKVSIRSTDIVFSLMDLGG 86
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +PIA + I+ +FDLT TLNSI WY +A N +AIPIL+GTK++ F+
Sbjct: 87 QREFINMLPIATLGSSVIILLFDLTRPETLNSIKEWYRQALGLNDSAIPILVGTKYNLFI 146
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L + Q ++ + YA+ M A L F S +IN+ KIFK +AK+F+L T+ I
Sbjct: 147 DLEEEYQEKVSKTSMKYAQVMDAPLIFCSTAKSINIQKIFKVALAKIFDLTLTIPEINEI 206
Query: 277 GEPII 281
G+P++
Sbjct: 207 GDPLL 211
>gi|67484658|ref|XP_657549.1| cell cycle-associated GTPase [Entamoeba histolytica HM-1:IMSS]
gi|167381212|ref|XP_001735623.1| septum-promoting GTP-binding protein [Entamoeba dispar SAW760]
gi|56474815|gb|EAL52171.1| cell cycle-associated GTPase, putative [Entamoeba histolytica
HM-1:IMSS]
gi|165902316|gb|EDR28173.1| septum-promoting GTP-binding protein, putative [Entamoeba dispar
SAW760]
gi|407043068|gb|EKE41717.1| cell cycle-associated GTPase, putative [Entamoeba nuttalli P19]
gi|449704011|gb|EMD44340.1| septum promoting GTP-binding protein, putative [Entamoeba
histolytica KU27]
Length = 189
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 2/186 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
+ LKI+++GD +GKTS VKYV GN E +Q G+N + KT+ ++G + FS+WD+GG
Sbjct: 4 IKLKIAMVGDAGVGKTSLMVKYVEGNFDEDYIQTLGVNCMEKTISLKGKEVTFSVWDLGG 63
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+P+ A ILF FDLT TLN+I WY EAR N +A IL+GTK+D F
Sbjct: 64 QREYITMLPMVMDGARVILFFFDLTRVMTLNNIKDWYKEARAHNNSASCILVGTKYDLFA 123
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L + I A YA+AMKA+ F S++ IN+ +FK +AK+F L V +
Sbjct: 124 DLDATEKSRITATALKYAQAMKASCVFCSSSQGINIQNVFKVSLAKVFGLTLNVPQTTEG 183
Query: 277 GEPIID 282
++D
Sbjct: 184 AVLVVD 189
>gi|410082754|ref|XP_003958955.1| hypothetical protein KAFR_0I00390 [Kazachstania africana CBS 2517]
gi|372465545|emb|CCF59820.1| hypothetical protein KAFR_0I00390 [Kazachstania africana CBS 2517]
Length = 231
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 110/185 (59%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +++ L+GD Q+GKTS VKYV N E Q G+N + + + ++ I FS+ D+GG
Sbjct: 20 VDIQVGLVGDAQVGKTSLMVKYVQNIFDEEYTQTLGVNFLKRKVNLRSTDIVFSLMDLGG 79
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+A + AI+F+FDLT TL S+ WY +A N AIPIL+GTK+D F+
Sbjct: 80 QREFINMLPLAAVGSAAIIFLFDLTRPETLESVKEWYRQAYGLNNQAIPILVGTKYDLFI 139
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
L + Q ++ A Y++ M A L F S +IN+ KIFK +AK+F+L T+
Sbjct: 140 DLDEEYQRQVSKTALDYSEVMDAPLVFCSTAKSINIQKIFKIALAKIFSLTLTISEIKDT 199
Query: 277 GEPII 281
G+PI+
Sbjct: 200 GDPIL 204
>gi|322712672|gb|EFZ04245.1| septum initiation protein sid3 [Metarhizium anisopliae ARSEF 23]
Length = 256
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 106/184 (57%), Gaps = 15/184 (8%)
Query: 55 PAVRYQKLTRRSSSESSPAPDTMEAGLVELSRTFSSGYDTDSD-------LVSLKISLLG 107
PA RY S S PA +GL + S Y S+ V +K+ ++G
Sbjct: 56 PAHRYTPPVS-GPSHSRPA-----SGLSNPTHQTHSDYRQGSNEPPNGRNHVVIKVGMVG 109
Query: 108 DCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVP 165
D QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG + +P
Sbjct: 110 DAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLP 169
Query: 166 IACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWT 225
+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIPIL+GTK+D FV P Q
Sbjct: 170 LVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDHFVNFPIQDQEE 229
Query: 226 IATQ 229
I+ Q
Sbjct: 230 ISNQ 233
>gi|322695311|gb|EFY87121.1| putative septum initiation protein sid3 [Metarhizium acridum CQMa
102]
Length = 256
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 106/184 (57%), Gaps = 15/184 (8%)
Query: 55 PAVRYQKLTRRSSSESSPAPDTMEAGLVELSRTFSSGYDTDSD-------LVSLKISLLG 107
PA RY S S PA +GL + S Y S+ V +K+ ++G
Sbjct: 56 PAHRYTPPVS-GPSHSRPA-----SGLSNPTHQSHSDYRQGSNEPQNGRNHVVIKVGMVG 109
Query: 108 DCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVP 165
D QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG + +P
Sbjct: 110 DAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLP 169
Query: 166 IACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWT 225
+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIPIL+GTK+D FV P Q
Sbjct: 170 LVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDHFVNFPIQDQEE 229
Query: 226 IATQ 229
I+ Q
Sbjct: 230 ISNQ 233
>gi|258566980|ref|XP_002584234.1| septum-promoting GTP-binding protein 1 [Uncinocarpus reesii 1704]
gi|237905680|gb|EEP80081.1| septum-promoting GTP-binding protein 1 [Uncinocarpus reesii 1704]
Length = 305
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 55 PAVRYQKLTRRSSSESSPAPDTMEAG--------LVELSRTFSSGYDTDSDLVSLKISLL 106
P + YQ+L + S S P G + + +G + + +V +K+ ++
Sbjct: 90 PTMSYQQLQQAPQSSSRPGSGLSSGGDRYGYAQSQPDQNSRPQAGPPSKNSVV-IKVGMV 148
Query: 107 GDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHV 164
GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG + +
Sbjct: 149 GDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNML 208
Query: 165 PIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQW 224
P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP+L+GTK+D FV P + Q
Sbjct: 209 PLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPLLVGTKYDHFVNFPREDQE 268
Query: 225 TIATQ 229
I+ Q
Sbjct: 269 EISIQ 273
>gi|302662967|ref|XP_003023132.1| hypothetical protein TRV_02710 [Trichophyton verrucosum HKI 0517]
gi|291187113|gb|EFE42514.1| hypothetical protein TRV_02710 [Trichophyton verrucosum HKI 0517]
Length = 365
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 91/141 (64%), Gaps = 6/141 (4%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNEQER-----SLQMAGLNLINKTLMVQGARIAFSIW 152
V +K+ ++GD QIGKTS VKYV ++ R + G+N + KT+ ++ I FSIW
Sbjct: 215 VVIKVGMVGDAQIGKTSLMVKYVEGDKSREALITNTTEPGVNFMEKTISIRNTEITFSIW 274
Query: 153 DVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKF 212
D+GG + +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+
Sbjct: 275 DLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKY 334
Query: 213 DDFVRLPPDLQWTIATQARAY 233
D FV P + Q I+ Q R +
Sbjct: 335 DHFVNFPREDQEEISIQVRPF 355
>gi|406602701|emb|CCH45749.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 175
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 105/166 (63%), Gaps = 1/166 (0%)
Query: 117 VKYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAIL 175
VKY N + + + G+N + K + + I F+IWD+GGD +P+ AVAI+
Sbjct: 2 VKYTNNTFDSNYKKTLGVNFMEKQIELNSTDIKFTIWDLGGDLEFSKMLPLTTDGAVAII 61
Query: 176 FMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAK 235
FMFDLT + +L ++ WY + R N+TAIP+L+GTK+D F+ + + Q + Q+ Y+K
Sbjct: 62 FMFDLTKKQSLINLKEWYKQVRLQNKTAIPLLVGTKYDLFLEMSEEYQKKLTIQSFKYSK 121
Query: 236 AMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPII 281
AMK++L F+S++ +IN+ K+FK +M+K F+L + IGEPI+
Sbjct: 122 AMKSSLIFTSSSDSINIQKVFKILMSKSFDLQLNLPELKNIGEPIL 167
>gi|169614393|ref|XP_001800613.1| hypothetical protein SNOG_10337 [Phaeosphaeria nodorum SN15]
gi|160707337|gb|EAT82672.2| hypothetical protein SNOG_10337 [Phaeosphaeria nodorum SN15]
Length = 360
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 102/185 (55%), Gaps = 40/185 (21%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 209 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 268
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GT
Sbjct: 269 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGT------ 322
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
NINV KIFK +++K F+L T+ I
Sbjct: 323 --------------------------------NINVQKIFKIVLSKAFDLKCTIPEIENI 350
Query: 277 GEPII 281
GEP++
Sbjct: 351 GEPLL 355
>gi|28396142|gb|AAO39054.1| Tem-1-like protein [Giardia intestinalis]
Length = 206
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 118/199 (59%), Gaps = 3/199 (1%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGA 145
G+ S + +KI+LLG+ + GKTS V+YV E +Q G+N + +T+ +
Sbjct: 4 LKKGFAQMSQQLIVKIALLGNAEAGKTSLMVRYVEGEFNHNYIQSLGVNFMERTITLHDN 63
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP 205
+ SIWD+GG+S + +P+ C ++ L++FDLTS+ +L SI WY +A+ N++A P
Sbjct: 64 PVLLSIWDLGGESEFKNMLPLVCDGSMVFLYIFDLTSKTSLASIKEWYRQAKALNRSAFP 123
Query: 206 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMK-ATLFFSSATHNINVNKIFKFIMAKLF 264
+L+G K+D F L D + I AR Y+KAMK L F+SA +N+N++FK ++ +F
Sbjct: 124 VLVGAKYDRFRELREDKKREIIEHARRYSKAMKNCPLVFTSAELGVNINRLFKLVVCLVF 183
Query: 265 NLPWTVKRNLTIGEPIIDF 283
L +++ +PI ++
Sbjct: 184 GLNPGIEQIEADDQPIFEY 202
>gi|403216154|emb|CCK70652.1| hypothetical protein KNAG_0E03990 [Kazachstania naganishii CBS
8797]
Length = 234
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 109/185 (58%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
+ +++ L+GD Q+GKTS VKYV N E Q G+N + + + ++ I FSI D+GG
Sbjct: 18 IDVQVGLVGDAQVGKTSLMVKYVQNIFDEEYTQTLGVNFLKRKVNLRSTDIIFSIMDLGG 77
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
+ +P+A + I+FMFDLT TL SI W+ +A N +A+PIL+GTK+D +
Sbjct: 78 QKEFINMLPLAAVGSSVIIFMFDLTRPKTLQSIKDWFRQAHGLNDSAVPILVGTKYDLSI 137
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
+ I+ A YA+ M A + F S +I++ KIFK +AK+FNL TV +I
Sbjct: 138 ETDERVPGNISCTAMRYAQVMNAPIVFCSTAKSIHIQKIFKIALAKIFNLTLTVPEIESI 197
Query: 277 GEPII 281
G+P++
Sbjct: 198 GDPLL 202
>gi|159114236|ref|XP_001707343.1| Tem-1-like protein [Giardia lamblia ATCC 50803]
gi|157435447|gb|EDO79669.1| Tem-1-like protein [Giardia lamblia ATCC 50803]
gi|308161347|gb|EFO63799.1| Tem-1-like protein [Giardia lamblia P15]
Length = 196
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 114/186 (61%), Gaps = 3/186 (1%)
Query: 101 LKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
+KI+LLG+ + GKTS V+YV E +Q G+N + +T+ + + SIWD+GG+S
Sbjct: 7 VKIALLGNAEAGKTSLMVRYVEGEFNHNYIQSLGVNFMERTITLHDNPVLLSIWDLGGES 66
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
+ +P+ C ++ L++FDLTS+ +L SI WY +A+ N++A P+L+G K+D F L
Sbjct: 67 EFKNMLPLVCDGSMVFLYIFDLTSKTSLASIKEWYRQAKALNRSAFPVLVGAKYDRFREL 126
Query: 219 PPDLQWTIATQARAYAKAMK-ATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIG 277
D + I AR Y+KAMK L F+SA +N+N++FK ++ +F L +++
Sbjct: 127 REDKKREIIEHARRYSKAMKNCPLVFTSAELGVNINRLFKLVVCLVFGLNPGIEQIEADD 186
Query: 278 EPIIDF 283
+PI ++
Sbjct: 187 QPIFEY 192
>gi|253745133|gb|EET01237.1| Tem-1-like protein [Giardia intestinalis ATCC 50581]
Length = 197
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 114/186 (61%), Gaps = 3/186 (1%)
Query: 101 LKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
+KI+LLG+ + GKTS V+YV E +Q G+N + +T+ + + SIWD+GG+S
Sbjct: 7 VKIALLGNAEAGKTSLMVRYVEGEFNHNYIQSLGVNFMERTITLHDNPVLLSIWDLGGES 66
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
+ +P+ C ++ L++FDLTS+ +L SI WY +A+ N++A P+L+G K+D F L
Sbjct: 67 EFKNMLPLVCDGSMVFLYIFDLTSKTSLASIKEWYRQAKALNRSAFPVLVGAKYDRFREL 126
Query: 219 PPDLQWTIATQARAYAKAMK-ATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIG 277
D + I AR Y+KAMK L F+SA +N+N++FK ++ +F L +++
Sbjct: 127 REDKRKEIIEHARRYSKAMKNCPLVFTSAELGVNINRLFKLVVCLVFGLNPGIEQIDADD 186
Query: 278 EPIIDF 283
+PI ++
Sbjct: 187 QPIFEY 192
>gi|14275892|dbj|BAB58892.1| Tem1-like protein [Giardia intestinalis]
Length = 177
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 101/169 (59%), Gaps = 2/169 (1%)
Query: 117 VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAIL 175
V+YV E +Q G+N + +T+ + + SIWD+GG+S + +P+ C ++ L
Sbjct: 5 VRYVEGEFNHNYIQSLGVNFMERTITLHDNPVLLSIWDLGGESEFKNMLPLVCDGSMVFL 64
Query: 176 FMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAK 235
++FDLTS+ +L SI WY +A+ N++A P+L+G K+D F L D + I AR Y+K
Sbjct: 65 YIFDLTSKTSLASIKEWYRQAKALNRSAFPVLVGAKYDRFRELREDKKREIIEHARRYSK 124
Query: 236 AMK-ATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPIIDF 283
AMK L F+SA +N+N++FK ++ +F L +++ +PI ++
Sbjct: 125 AMKNCPLVFTSAELGVNINRLFKLVVCLVFGLNPGIEQIEADDQPIFEY 173
>gi|302497239|ref|XP_003010620.1| hypothetical protein ARB_03321 [Arthroderma benhamiae CBS 112371]
gi|291174163|gb|EFE29980.1| hypothetical protein ARB_03321 [Arthroderma benhamiae CBS 112371]
Length = 350
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 81/136 (59%), Gaps = 14/136 (10%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
V +K+ ++GD QIGKTS VKYV + +Q I FSIWD+GG
Sbjct: 218 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDY-------------IQTLEITFSIWDLGGQ 264
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVR 217
+ +P+ C DAVAILFMFDLT + TLNSI WY + R +N+TAIP L+GTK+D FV
Sbjct: 265 REFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFVN 324
Query: 218 LPPDLQWTIATQARAY 233
P + Q I+ Q R +
Sbjct: 325 FPREDQEEISIQVRPF 340
>gi|123390419|ref|XP_001299882.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121880822|gb|EAX86952.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 192
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 105/185 (56%), Gaps = 2/185 (1%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
+++KI+L+G +GKT+ VKY G E + G+ + + + V+ + IWD+GG
Sbjct: 6 ITVKIALIGSSMVGKTTLMVKYCKGTFSEDYIATLGVQFLERQITVKNTPVNIVIWDIGG 65
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
D +P+ C A ++FMFDL++ +L ++ WY A N +A L+G KFD +
Sbjct: 66 QKSFMDMLPVCCDGAHVLIFMFDLSNITSLTALRDWYKSAYDCNPSARVFLVGNKFDLYF 125
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
+ + I +A+ +A+A+ A L + S TH+INV K+F+ I+A++F L +++
Sbjct: 126 EQTEEEKIAITNKAKKFAQAIGAPLMYCSNTHSINVKKLFQLIIAQVFGLDPRIEQCSDP 185
Query: 277 GEPII 281
EPI+
Sbjct: 186 NEPIV 190
>gi|440291385|gb|ELP84654.1| septum-promoting GTP-binding protein, putative [Entamoeba invadens
IP1]
Length = 189
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 97/175 (55%), Gaps = 2/175 (1%)
Query: 100 SLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
++KI++LGD ++GKTS VKYV G E + G+ + K + ++G I FSI D+GG
Sbjct: 6 TIKIAMLGDSEVGKTSLMVKYVEGKFNEDYIMTLGIAFMEKKINLRGHEITFSIGDLGGQ 65
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVR 217
+P A +L FDLT +LN++ WY R++N TA IL+GTK+D FV
Sbjct: 66 REYLTMLPNVLDGAHIVLLFFDLTRSVSLNNVKYWYKNTRQYNPTASIILVGTKYDLFVD 125
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKR 272
L + I A +A MK+ F SA INV+ IFK ++K + L +++
Sbjct: 126 LDEAERNKIVETALKFANLMKSACVFCSALLGINVDTIFKISLSKAYGLKLNIQQ 180
>gi|67542085|ref|XP_664810.1| hypothetical protein AN7206.2 [Aspergillus nidulans FGSC A4]
gi|40742268|gb|EAA61458.1| hypothetical protein AN7206.2 [Aspergillus nidulans FGSC A4]
Length = 268
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 79/123 (64%), Gaps = 2/123 (1%)
Query: 84 LSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLM 141
LS T T + V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+
Sbjct: 110 LSGTQKQPAQTTKNSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTIS 169
Query: 142 VQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQ 201
++ I FSIWD+GG + +P+ C DAVAILFMFDLT + TLNSI WY + R +N+
Sbjct: 170 IRNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNK 229
Query: 202 TAI 204
TAI
Sbjct: 230 TAI 232
>gi|384485670|gb|EIE77850.1| hypothetical protein RO3G_02554 [Rhizopus delemar RA 99-880]
Length = 161
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 88/140 (62%), Gaps = 3/140 (2%)
Query: 92 YDTDSDLVSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAF 149
+ T+++++ LKI ++GD QIGKTS +KY G +Q G+N + K++ ++ I F
Sbjct: 19 HSTNNNVI-LKIGIVGDAQIGKTSLMIKYAEGAYDPEYVQTLGVNFMEKSISIRQTEITF 77
Query: 150 SIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIG 209
SIWD+GG + +P C DAVAILF FDL+ +LN++ W+ + R TA+P+L+G
Sbjct: 78 SIWDLGGQKQFASMLPFVCNDAVAILFTFDLSKLSSLNNLREWHRQVRGITMTAVPLLVG 137
Query: 210 TKFDDFVRLPPDLQWTIATQ 229
TK+D+FV L + Q + Q
Sbjct: 138 TKYDEFVDLSFEHQQEMTRQ 157
>gi|323332257|gb|EGA73667.1| Tem1p [Saccharomyces cerevisiae AWRI796]
Length = 172
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 79/131 (60%)
Query: 153 DVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKF 212
D+GG + +PIA + I+F+FDLT TL SI WY +A N +AIPIL+GTK+
Sbjct: 2 DLGGQREFINMLPIATVGSSVIIFLFDLTRPETLGSIKEWYRQAYGLNDSAIPILVGTKY 61
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKR 272
D + L P+ Q I+ + YA+ M A L F S +IN+ KIFK +AK+FNL T+
Sbjct: 62 DLLIDLDPEYQEQISRTSMKYAQVMNAPLIFCSTAKSINIQKIFKIALAKIFNLTLTIPE 121
Query: 273 NLTIGEPIIDF 283
IG+P++ +
Sbjct: 122 INEIGDPLLIY 132
>gi|325182079|emb|CCA16532.1| septumpromoting GTPbinding protein 1 putative [Albugo laibachii
Nc14]
Length = 138
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 61/101 (60%)
Query: 131 AGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIV 190
+G+N + KT+ ++ I FSIWD+GG +P+ C DAVAILFMFDL+ + TL SI
Sbjct: 35 SGVNFMEKTIALRNTEITFSIWDLGGHREFISMLPLVCNDAVAILFMFDLSRKATLTSIK 94
Query: 191 GWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQAR 231
WY + R N+ A P L+G K+D F + + Q I Q R
Sbjct: 95 EWYRQVRSINKNAFPFLVGMKYDVFSKFNVEEQEDITKQVR 135
>gi|167539982|ref|XP_001741487.1| rab5 [Entamoeba dispar SAW760]
gi|165893902|gb|EDR22017.1| rab5, putative [Entamoeba dispar SAW760]
Length = 195
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 81/172 (47%), Gaps = 7/172 (4%)
Query: 94 TDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERSLQ--MAGLNLINKTLMVQGARIAFSI 151
++ + KI LLGD +GK+S V V ++ + Q G + KTL+V G I F I
Sbjct: 2 SEGNTYQFKIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIVDGDTIKFEI 61
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTK 211
WD G R P+ + + A L ++D+TS + W E R AI L+G K
Sbjct: 62 WDTAGQERYHSLTPMYYRGSNAALVVYDITSDSSFTQAKKWIDELRGSGNEAIIFLVGNK 121
Query: 212 FDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D D + +A YA+++ +SA NINVN++F I KL
Sbjct: 122 CD-----LADSRVITKEEAEGYARSLSIDYIETSAKANINVNELFDQIARKL 168
>gi|156064083|ref|XP_001597963.1| hypothetical protein SS1G_00049 [Sclerotinia sclerotiorum 1980]
gi|154690911|gb|EDN90649.1| hypothetical protein SS1G_00049 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 252
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 122 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 181
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSR 183
+ +P+ C DAVAILFMFDLT +
Sbjct: 182 QREFVNMLPLVCNDAVAILFMFDLTRK 208
>gi|115463295|ref|NP_001055247.1| Os05g0341600 [Oryza sativa Japonica Group]
gi|54291745|gb|AAV32114.1| unknown protein [Oryza sativa Japonica Group]
gi|113578798|dbj|BAF17161.1| Os05g0341600 [Oryza sativa Japonica Group]
gi|215767010|dbj|BAG99238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222631179|gb|EEE63311.1| hypothetical protein OsJ_18122 [Oryza sativa Japonica Group]
Length = 212
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 91/186 (48%), Gaps = 12/186 (6%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGN----EQERSLQMAGLNLINKTLMVQGARIAFSIWD 153
VS K+ LLGD ++GKTS V +YV + +QE ++Q + L K L+V+G I SIWD
Sbjct: 13 VSFKLVLLGDGRVGKTSLVLRYVNDVFSDKQEATVQASYLT---KRLVVEGVPITLSIWD 69
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFD 213
G + PI +DA A L ++D+T T + W E ++ I + I
Sbjct: 70 TAGQEKFHALGPIYYRDADAALLVYDITDNDTFLRVTKWVKELKQMANKDIVMAIAANKS 129
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRN 273
D VR + +A +YA+++ ATLF +SA ++ IF I +L
Sbjct: 130 DLVR----SKHIDTNEAASYAESIGATLFVTSAKAGTGIDDIFSDIAKRLLERRKNSSDG 185
Query: 274 LTIGEP 279
L++ P
Sbjct: 186 LSLAHP 191
>gi|125551885|gb|EAY97594.1| hypothetical protein OsI_19520 [Oryza sativa Indica Group]
Length = 210
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 91/186 (48%), Gaps = 12/186 (6%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGN----EQERSLQMAGLNLINKTLMVQGARIAFSIWD 153
VS K+ LLGD ++GKTS V +YV + +QE ++Q + L K L+V+G I SIWD
Sbjct: 11 VSFKLVLLGDGRVGKTSLVLRYVNDVFSDKQEATVQASYLT---KRLVVEGVPITLSIWD 67
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFD 213
G + PI +DA A L ++D+T T + W E ++ I + I
Sbjct: 68 TAGQEKFHALGPIYYRDADAALLVYDITDNDTFLRVTKWVKELKQMANKDIVMAIAANKS 127
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRN 273
D VR + +A +YA+++ ATLF +SA ++ IF I +L
Sbjct: 128 DLVR----SKHIDTNEAASYAESIGATLFVTSAKAGTGIDDIFSDIAKRLLEKRKNSSDG 183
Query: 274 LTIGEP 279
L++ P
Sbjct: 184 LSLAHP 189
>gi|407044250|gb|EKE42471.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 195
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 7/172 (4%)
Query: 94 TDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERSLQ--MAGLNLINKTLMVQGARIAFSI 151
++ + KI LLGD +GK+S V V ++ + Q G + KTL+V G I F I
Sbjct: 2 SEGNTYQFKIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIVDGDTIKFEI 61
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTK 211
WD G R P+ + + A L ++D+TS + W E R A+ L+G K
Sbjct: 62 WDTAGQERYHSLTPMYYRGSNAALVVYDITSDSSFIQAKKWIDELRGSGNEAVIFLVGNK 121
Query: 212 FDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D D + +A YA+++ +SA NINVN++F I KL
Sbjct: 122 CD-----LADSRVITKEEAEGYARSLSIDYIETSAKANINVNELFDQIARKL 168
>gi|67480015|ref|XP_655377.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|13537437|dbj|BAB40673.1| small GTPase Rab5 [Entamoeba histolytica]
gi|56472508|gb|EAL49990.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
Length = 195
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 82/173 (47%), Gaps = 9/173 (5%)
Query: 94 TDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERSLQ--MAGLNLINKTLMVQGARIAFSI 151
++ + KI LLGD +GK+S V V ++ + Q G + KTL+V G I F I
Sbjct: 2 SEGNTYQFKIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIVDGETIKFEI 61
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTK 211
WD G R P+ + + A L ++D+TS + W E R AI L+G K
Sbjct: 62 WDTAGQERYHSLTPMYYRGSNAALVVYDITSDSSFIQAKKWIDELRGSGNEAIIFLVGNK 121
Query: 212 FD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D D R+ +A YA+++ +SA NINVN++F I KL
Sbjct: 122 CDLDNSRV------ITKEEAEGYARSLSIDYIETSAKANINVNELFDQIARKL 168
>gi|238612177|ref|XP_002398151.1| hypothetical protein MPER_01301 [Moniliophthora perniciosa FA553]
gi|215474098|gb|EEB99081.1| hypothetical protein MPER_01301 [Moniliophthora perniciosa FA553]
Length = 100
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 55/93 (59%)
Query: 189 IVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATH 248
I+ + S + PILIGTKFD F P D Q I QA+ +A+AM A+L F S +
Sbjct: 3 IIHFISRVVPYTSDRNPILIGTKFDQFATFPRDEQEEITKQAKRFARAMHASLIFCSTSA 62
Query: 249 NINVNKIFKFIMAKLFNLPWTVKRNLTIGEPII 281
+INV KIFK ++AK F+L + +GEPI+
Sbjct: 63 SINVQKIFKIVLAKAFDLKCVIPEIEGVGEPIL 95
>gi|440294791|gb|ELP87736.1| GTP-binding protein YPT1, putative [Entamoeba invadens IP1]
Length = 200
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 10/186 (5%)
Query: 101 LKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
+ I+L GD +GKT F K VG +E + G ++ K L+++G +WD G
Sbjct: 2 ISIALSGDAFVGKTCFFKRFSVGQFEENTSSSIGCDVTCKKLILEGKSYNVQLWDTAGQE 61
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGW---YSEARKWNQTAIPILIGTKFDDF 215
++ +LFMFDLTS TL+ + W + E N + +LIGTK D
Sbjct: 62 IFRSTTATYFRNRSCVLFMFDLTSSETLSHVEDWLKTFYEINNENTPTLLVLIGTKCDLV 121
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLT 275
+ QA+ +AK F S+ NIN++ I F++ L N P ++
Sbjct: 122 AE-----RVVTEDQAKEFAKTHSIPYFECSSRLNINIDTIIHFVLKNLRNPPQLQQQTKK 176
Query: 276 IGEPII 281
EP+I
Sbjct: 177 EEEPVI 182
>gi|357612732|gb|EHJ68147.1| hypothetical protein KGM_14978 [Danaus plexippus]
Length = 217
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 14/170 (8%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GDC GKT V+ + GN ER G++ KTL+V G R+ IWD G
Sbjct: 21 FKIVLIGDCGTGKTCIVQRLKSGNFIERHGNTIGVDFSMKTLIVDGKRVKLQIWDTAGQE 80
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + A ++ ++D+T R T SI W E R++ + + + LIG K D +
Sbjct: 81 RFRTITQSYYRSANGVIIVYDITKRSTFLSIQKWIEEVRRYTSSNVIVSLIGNKCDLTEQ 140
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
+ PD + +++ + + +F +SA N NV F+ I +L
Sbjct: 141 REVEPD-------EPKSFCRYVPEIMFVMETSAKDNTNVEDTFRNIATEL 183
>gi|440798204|gb|ELR19272.1| GTPbinding protein [Acanthamoeba castellanii str. Neff]
Length = 184
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
++K+ ++GDC +GKT+ V ++V N+ ++ G + K L+ G I +WD G
Sbjct: 9 TVKVVIVGDCGVGKTALVQRFVFNKFDKHDSTIGAAFVTKDLLADGVLIKLEMWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFDDFVR 217
R P+ + A A L ++D+TS + + GW+SE R A+P +++G K
Sbjct: 69 RYRSLSPLYFRGADACLMVYDVTSSQSFADLEGWFSEFRSMAGAAVPMVVVGNKM----- 123
Query: 218 LPPDLQWTIATQAR---AYAKAMKATLFFSSATHNINVNKIF 256
DLQ T AR ++ F +SA N V+++F
Sbjct: 124 ---DLQTTRQVNARDAEEWSHGADCAHFVASAKDNTGVDEVF 162
>gi|440290249|gb|ELP83675.1| rab5, putative [Entamoeba invadens IP1]
Length = 194
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 85/190 (44%), Gaps = 10/190 (5%)
Query: 94 TDSDLVSLKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQGARIAFSI 151
T+ + KI LLGD +GK+S V V G +E G + KTL+V I F
Sbjct: 2 TEGNTYQFKIVLLGDSSVGKSSIVLRVCKGEYKEFQENTIGAAFLTKTLIVDKDTIKFEC 61
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTK 211
WD G R P+ + + A L +FD+TS + W E R+ + L+G K
Sbjct: 62 WDTAGQERYHSLTPMYYRGSNAALVVFDITSDSSYAQAKKWVDELRESANDTMIFLVGNK 121
Query: 212 FDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVK 271
D L T A AYA+++ +SA NINV+++F + K LP T K
Sbjct: 122 CD----LEGSRSVT-KEDAEAYARSISVDYIETSAKSNINVSELFDLVARK---LPKTEK 173
Query: 272 RNLTIGEPII 281
+ E +I
Sbjct: 174 GLIDQDEVVI 183
>gi|225710862|gb|ACO11277.1| Ras-related protein Rab-21 [Caligus rogercresseyi]
Length = 217
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
+ K+ LLG+ +GKTS V +YV ++ +R + + +NK L V+G R+ SIWD G
Sbjct: 14 NFKVVLLGEGCVGKTSCVLRYVDDQFNDRHITTLQASFLNKRLNVRGKRVNLSIWDTAGQ 73
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDFV 216
R PI +DA + ++D++ + + W E RK I +LI G K D
Sbjct: 74 ERFHALGPIYYRDANGAILVYDISDLDSFRKVKVWIKELRKMLGNKIVLLIAGNKID--- 130
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L Q T A YAK++ AT F +SA N ++++F
Sbjct: 131 -LEDSRQVETGT-AEEYAKSVGATHFHTSAKDNTGIDELF 168
>gi|167522685|ref|XP_001745680.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776029|gb|EDQ89651.1| predicted protein [Monosiga brevicollis MX1]
Length = 201
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 85/161 (52%), Gaps = 8/161 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
+++ ++GD +GK+S +Y NE E+++ G++ + KT+ V I +WD G
Sbjct: 7 VRVIMVGDSTVGKSSMAARYSRNEFYEQAISTIGVDFVLKTMQVDSKTIKMQVWDTAGQE 66
Query: 159 --RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDF 215
RS H DAV L ++D+T+ +++S+ GW AR + + I +IG KFD +
Sbjct: 67 RFRSITHSYYRGADAV--LVVYDITNADSVDSLSGWVERARAHAKVDVAIFIIGNKFDLY 124
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
P Q T +QA+ A+ + F +SA +INV IF
Sbjct: 125 DPADPQ-QVTNVSQAQHLARKLGLHHFVASAKSDINVQDIF 164
>gi|195170968|ref|XP_002026283.1| GL24681 [Drosophila persimilis]
gi|194111178|gb|EDW33221.1| GL24681 [Drosophila persimilis]
Length = 375
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 66/123 (53%), Gaps = 8/123 (6%)
Query: 97 DLVSLKISLLGDCQIGKTSF-VKYVGNEQERSL----QMAGLNLINKTLMVQGARIAFSI 151
D V+ K LLGD +GKTSF VKY N E L G+ L NK ++V G R+ I
Sbjct: 174 DTVNHKTILLGDSGVGKTSFLVKY--NTGEFRLGSFSATVGIALTNKVVVVDGTRVKLQI 231
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGT 210
WD G R +DA A+L ++D+T++ T ++I W E R++ Q + I LIG
Sbjct: 232 WDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGN 291
Query: 211 KFD 213
K D
Sbjct: 292 KAD 294
>gi|332018505|gb|EGI59095.1| Ras-related protein Rab-43 [Acromyrmex echinatior]
Length = 212
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GDC GKT V+ G ER G++ KT+++ G R+ IWD G
Sbjct: 14 FKIVLIGDCGTGKTCVVQRFRSGTFVERHGNTIGVDFTMKTVLIDGKRVKLQIWDTAGQE 73
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI-PILIGTKFDDFVR 217
R + A ++ ++D+T R T S+ W E R+++ + + +L+G K D
Sbjct: 74 RFRTITQSYYRSANGVIVVYDITKRSTFLSLQRWVEEVRRYSSSHVLLVLVGNKCD---- 129
Query: 218 LPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
DL+ +A A + + L +SA N N++ IF ++ ++L
Sbjct: 130 -LEDLREVKEIEAEALCQYLPEVLHVVETSAKDNTNIDSIFFYLASEL 176
>gi|16902020|gb|AAL27637.1| GH21984p [Drosophila melanogaster]
Length = 388
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 66/123 (53%), Gaps = 8/123 (6%)
Query: 97 DLVSLKISLLGDCQIGKTSF-VKYVGNEQERSL----QMAGLNLINKTLMVQGARIAFSI 151
D V+ K LLGD +GKTSF VKY N E L G+ L NK ++V G R+ I
Sbjct: 187 DTVNHKTILLGDSGVGKTSFLVKY--NTGEFRLGSFSATVGIALTNKVVVVDGTRVKLQI 244
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGT 210
WD G R +DA A+L ++D+T++ T ++I W E R++ Q + I LIG
Sbjct: 245 WDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGN 304
Query: 211 KFD 213
K D
Sbjct: 305 KAD 307
>gi|24668006|ref|NP_649303.2| Rab26, isoform B [Drosophila melanogaster]
gi|75027268|sp|Q9VP48.2|RAB26_DROME RecName: Full=Ras-related protein Rab-26; Flags: Precursor
gi|23094227|gb|AAF51708.2| Rab26, isoform B [Drosophila melanogaster]
gi|201065999|gb|ACH92409.1| FI07640p [Drosophila melanogaster]
Length = 388
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 66/123 (53%), Gaps = 8/123 (6%)
Query: 97 DLVSLKISLLGDCQIGKTSF-VKYVGNEQERSL----QMAGLNLINKTLMVQGARIAFSI 151
D V+ K LLGD +GKTSF VKY N E L G+ L NK ++V G R+ I
Sbjct: 187 DTVNHKTILLGDSGVGKTSFLVKY--NTGEFRLGSFSATVGIALTNKVVVVDGTRVKLQI 244
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGT 210
WD G R +DA A+L ++D+T++ T ++I W E R++ Q + I LIG
Sbjct: 245 WDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGN 304
Query: 211 KFD 213
K D
Sbjct: 305 KAD 307
>gi|440493727|gb|ELQ76160.1| putative Ras small GTPase [Trachipleistophora hominis]
Length = 213
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 13/187 (6%)
Query: 97 DLVSLKISLLGDCQIGKTSFV-KYVGNEQERSL-QMAGLNLINKTLMVQGARIAFSIWDV 154
DL + KI +LG+ +GKTS ++V +E + SL G++L+ KT+ V GA++ +IWD
Sbjct: 17 DLTTYKIIILGESYVGKTSIAQRFVNDEFDTSLFSTIGIDLLKKTVTVDGAKVRLNIWDT 76
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
G R + A I+ +FDL + +SI W+ + +PI L+G K+D
Sbjct: 77 AGQERFHSITKSYYRCADGIILVFDLLDLKSFDSIDRWFEGIHRETDENVPIFLVGNKYD 136
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRN 273
D D + + A++M F +SA +N+ +F + +L K
Sbjct: 137 D-AEHRVDFVLDVFEEK---ARSMNVEFFVTSAKTGLNIELLFTRMAEEL------SKNE 186
Query: 274 LTIGEPI 280
+G PI
Sbjct: 187 NVLGTPI 193
>gi|390594811|gb|EIN04220.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 272
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 99/191 (51%), Gaps = 16/191 (8%)
Query: 99 VSLKISLLGDCQIGKTSFVKYVGNEQ----ERSLQMAGLNLINKTLMVQGARIAFSIWDV 154
+++K+ L+G+ +GK+SF+ +EQ E + G++ + V+G ++ SIWD
Sbjct: 11 INVKLLLIGNSSVGKSSFLLRFSDEQWLPEEEASATIGVDFRVHKMEVKGKKVKLSIWDT 70
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFD 213
G R + A I+ M+D+++R + +++ W+SE + ++ I++G K D
Sbjct: 71 AGQERFRTITSSYYRGAQGIILMYDVSNRESFDALPRWFSELETYVSPSVAKIIVGNKVD 130
Query: 214 -DFVRLPPDLQWTIAT-QARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLP--WT 269
+F R +AT + A+A+ M + +SA + V++ F+ ++ ++ + P W
Sbjct: 131 KEFSR-------QVATGEGAAFAQRMDSLFIEASAKTAVGVSEAFEELVERIMDTPELWA 183
Query: 270 VKRNLTIGEPI 280
+ +L I PI
Sbjct: 184 ARESLRIHSPI 194
>gi|156392797|ref|XP_001636234.1| predicted protein [Nematostella vectensis]
gi|156223335|gb|EDO44171.1| predicted protein [Nematostella vectensis]
Length = 178
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 79/162 (48%), Gaps = 8/162 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQERSLQ-MAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI ++GD + GKTS + +Y RSL G++ KTL G RI IWD G
Sbjct: 14 FKIVIVGDYKCGKTSLLYRYTDKIFNRSLHSTVGVDFRCKTLTRDGKRIKLQIWDTAGHE 73
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R V + A +L ++D+TSR + S+ WY + Q A +L+G K L
Sbjct: 74 RFRTAVASYYRGATGVLLVYDITSRQSFCSVGHWYMQ-HNCEQEAKAVLVGNK----CHL 128
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIM 260
+ + ++A + R AK + F +SA NINV F+ ++
Sbjct: 129 DCEREVSVA-EGRGLAKELGLPFFETSAEKNINVTDCFEALV 169
>gi|346467757|gb|AEO33723.1| hypothetical protein [Amblyomma maculatum]
Length = 214
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 14/163 (8%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGN----EQERSLQMAGLNLINKTLMVQGARIAFSIWDV 154
+ K+ LLGD ++GKTS V +YV N +Q+ ++Q + L K ++++G I +IWD
Sbjct: 48 TFKLVLLGDGRVGKTSLVLRYVNNVFSEKQQATVQASYLT---KRVVIEGVPITLAIWDT 104
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDD 214
G R PI +DA A L ++D+T + + W E ++ I I I D
Sbjct: 105 AGQERFHALGPIYYRDADAALLVYDMTDNDSFVRVRKWVKELQQMASKTIIIAIAANKSD 164
Query: 215 FVRLPP-DLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
VR D+Q +A +YA ++ A +F +SA ++++F
Sbjct: 165 LVRSKKFDIQ-----EAESYAASIGARVFVTSAKSGEGIDEVF 202
>gi|195325951|ref|XP_002029694.1| GM25038 [Drosophila sechellia]
gi|194118637|gb|EDW40680.1| GM25038 [Drosophila sechellia]
Length = 219
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 10/168 (5%)
Query: 101 LKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GDC GKT V GN ER G++ KT+ V+G +I IWD G
Sbjct: 22 FKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQE 81
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFDDFVR 217
R + A +L ++D+T R + +++ W E R++ + + IL+G K D +
Sbjct: 82 RFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQ 141
Query: 218 LPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D + +AR + + LF +SA N+NV F+ + +L
Sbjct: 142 REVDFE-----EARQMCQYIPEILFVMETSAKENMNVEDAFRCLANEL 184
>gi|402218107|gb|EJT98185.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 215
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 91/180 (50%), Gaps = 12/180 (6%)
Query: 100 SLKISLLGDCQIGKTSFVKYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWDVG 155
+LKI L+GD +GK+S + ++ +E S G++ + + V G + SIWD
Sbjct: 12 NLKILLIGDSSVGKSSLLLRFSDQSFLSEEESSATIGVDFKVQRIEVDGVKYKLSIWDTA 71
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFD- 213
G R + A ++ ++D++SR + + + W++E + ++ +++G K D
Sbjct: 72 GQERFRTITSSYYRGAQGVILVYDVSSRESFDDLPRWFTELETYCGPSVAKVIVGNKIDK 131
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRN 273
+F R P + +AYA+ M A SSA I+V+++F+ I+ K+ P ++N
Sbjct: 132 EFSRRVP------TAEGQAYAERMGALFLESSAKRGIHVDEVFQTIVRKIVATPELWQKN 185
>gi|17737545|ref|NP_523970.1| Rab19, isoform A [Drosophila melanogaster]
gi|442630989|ref|NP_001261575.1| Rab19, isoform B [Drosophila melanogaster]
gi|194865952|ref|XP_001971685.1| GG14295 [Drosophila erecta]
gi|195491260|ref|XP_002093486.1| GE20724 [Drosophila yakuba]
gi|195588689|ref|XP_002084090.1| GD14074 [Drosophila simulans]
gi|2313047|dbj|BAA21712.1| rab-related protein 3 [Drosophila melanogaster]
gi|7295127|gb|AAF50452.1| Rab19, isoform A [Drosophila melanogaster]
gi|17945955|gb|AAL49022.1| RE48347p [Drosophila melanogaster]
gi|190653468|gb|EDV50711.1| GG14295 [Drosophila erecta]
gi|194179587|gb|EDW93198.1| GE20724 [Drosophila yakuba]
gi|194196099|gb|EDX09675.1| GD14074 [Drosophila simulans]
gi|220948860|gb|ACL86973.1| Rab-RP3-PA [synthetic construct]
gi|440215482|gb|AGB94270.1| Rab19, isoform B [Drosophila melanogaster]
Length = 219
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 10/168 (5%)
Query: 101 LKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GDC GKT V GN ER G++ KT+ V+G +I IWD G
Sbjct: 22 FKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQE 81
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFDDFVR 217
R + A +L ++D+T R + +++ W E R++ + + IL+G K D +
Sbjct: 82 RFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQ 141
Query: 218 LPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D + +AR + + LF +SA N+NV F+ + +L
Sbjct: 142 REVDFE-----EARQMCQYIPEILFVMETSAKENMNVEDAFRCLANEL 184
>gi|195376775|ref|XP_002047168.1| GJ13283 [Drosophila virilis]
gi|194154326|gb|EDW69510.1| GJ13283 [Drosophila virilis]
Length = 358
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 66/124 (53%), Gaps = 8/124 (6%)
Query: 96 SDLVSLKISLLGDCQIGKTSF-VKYVGNEQERSL----QMAGLNLINKTLMVQGARIAFS 150
D ++ K LLGD +GKTSF VKY N E L G+ L NK ++V G R+
Sbjct: 156 DDTINHKTILLGDSGVGKTSFLVKY--NTGEFRLGSFSATVGIALTNKVVVVDGTRVKLQ 213
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 209
IWD G R +DA A+L ++D+T++ T ++I W E R++ Q + I LIG
Sbjct: 214 IWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTFDNIRAWLGEIREYAQEDVVIVLIG 273
Query: 210 TKFD 213
K D
Sbjct: 274 NKAD 277
>gi|301104324|ref|XP_002901247.1| ras family GTPase, putative [Phytophthora infestans T30-4]
gi|262101181|gb|EEY59233.1| ras family GTPase, putative [Phytophthora infestans T30-4]
Length = 278
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 102 KISLLGDCQIGKTS-FVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
K+ LLG+ ++GKTS ++Y+ E ER + + ++K L+V R+A S+WD G R
Sbjct: 10 KVVLLGEGRVGKTSILLRYIKGEYDERQVSTLQASYLDKRLLVDNCRVALSLWDTAGQER 69
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVR-- 217
PI +DA L ++D+T + + W E R+ I I I D R
Sbjct: 70 FHALGPIYYRDADGALLVYDITDAESFRKVRTWVRELRRIVGDDISICIAGNKSDLHRNR 129
Query: 218 -LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
+P D +A+ YA+++ A F +SA N + +F + ++ N
Sbjct: 130 KVPED-------EAKRYAESVGAAHFDTSAKLNRGLEDVFVELTRRMLN 171
>gi|301090951|ref|XP_002895671.1| Rab21/Rab5 family GTPase, putative [Phytophthora infestans T30-4]
gi|262097098|gb|EEY55150.1| Rab21/Rab5 family GTPase, putative [Phytophthora infestans T30-4]
Length = 278
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 102 KISLLGDCQIGKTS-FVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
K+ LLG+ ++GKTS ++Y+ E ER + + ++K L+V R+A S+WD G R
Sbjct: 10 KVVLLGEGRVGKTSILLRYIKGEYDERQVSTLQASYLDKRLLVDNRRVALSLWDTAGQER 69
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVR-- 217
PI +DA L ++D+T + + W E R+ I I I D R
Sbjct: 70 FHALGPIYYRDADGALLVYDITDAESFRKVRTWVRELRRIVGDDISICIAGNKSDLHRNR 129
Query: 218 -LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
+P D +A+ YA+++ A F +SA N + +F + ++ N
Sbjct: 130 KVPED-------EAKRYAESVGAAHFDTSAKLNRGLEDVFVELTRRMLN 171
>gi|307192561|gb|EFN75749.1| Ras-related protein Rab-43 [Harpegnathos saltator]
Length = 215
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 10/168 (5%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GDC GKT V+ G ER G++ KT+++ G R+ IWD G
Sbjct: 22 FKIVLIGDCGTGKTCVVQRFKSGTYVERQGNTIGVDFSMKTVLIDGKRVKLQIWDTAGQE 81
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI-PILIGTKFDDFVR 217
R + A ++ ++D+T R T ++ W E R++ + + +L+G K D
Sbjct: 82 RFRTITQSYYRSANGVIIVYDITKRSTFLNLQRWMEEVRRYTSSHVLLVLVGNKCD---- 137
Query: 218 LPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
DL+ +A A + + L +SA N N++ IF ++ ++L
Sbjct: 138 -LEDLREVKKEEAEALCEYLPEVLHIVETSAKDNTNIDTIFFYLASEL 184
>gi|346980173|gb|EGY23625.1| septum-promoting GTP-binding protein [Verticillium dahliae VdLs.17]
Length = 271
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
V +K+ ++GD QIGKTS VKYV G+ E +Q G+N + KT+ ++ I FSIWD+GG
Sbjct: 150 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 209
Query: 157 DSRSFDHVPIACKDAVAILFM 177
+ +P+ C DAVAILF+
Sbjct: 210 QREFVNMLPLVCNDAVAILFI 230
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 239 ATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEPII 281
A LF +S H+INV KIFK +++K F+L T+ +GEP++
Sbjct: 226 AILFITS--HSINVQKIFKIVLSKAFDLKCTIPEIENVGEPLL 266
>gi|325188437|emb|CCA22973.1| Rab5 family GTPase putative [Albugo laibachii Nc14]
Length = 198
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 6/165 (3%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
+K+ LLGD +GK+S V ++V N + S G + ++K +MV+ I + IWD G
Sbjct: 11 VKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIMVENTPIKYQIWDTAGQE 70
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
+ P+ + A A + ++D+T + +L ++ W E ++ I I I D
Sbjct: 71 KYHSLAPMYYRGAAAAIVVYDITRKQSLATLKNWVKELKQLGPENIVIAIAGNKSDL--- 127
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D + + QA+AYA + A +SA + NV+ +F I +L
Sbjct: 128 -EDKREVPSAQAKAYADEIGALFIETSAKEDTNVSDLFISISKQL 171
>gi|195427457|ref|XP_002061793.1| GK17190 [Drosophila willistoni]
gi|194157878|gb|EDW72779.1| GK17190 [Drosophila willistoni]
Length = 219
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 10/168 (5%)
Query: 101 LKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GDC GKT V+ GN ER G++ KT+ V+G ++ IWD G
Sbjct: 22 FKIVLIGDCGTGKTCIVERFKTGNFVERHGNTIGVDFSMKTIAVEGKQVKLQIWDTAGQE 81
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFDDFVR 217
R + A +L ++D+T R + +++ W E R++ + + ILIG K D
Sbjct: 82 RFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILIGNKCDLDEE 141
Query: 218 LPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D + +AR + + LF +SA N+NV F+ + +L
Sbjct: 142 REVDFE-----EARQMCQYIPEILFVMETSAKSNMNVEDAFRCLATEL 184
>gi|348685093|gb|EGZ24908.1| hypothetical protein PHYSODRAFT_350023 [Phytophthora sojae]
Length = 282
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Query: 102 KISLLGDCQIGKTS-FVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
K+ LLG+ ++GKTS ++Y+ E ER + + ++K L+V R+A S+WD G R
Sbjct: 10 KVVLLGEGRVGKTSILLRYIKGEYDERQVSTLQASYLDKRLLVDNRRVALSLWDTAGQER 69
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVR-- 217
PI +DA L ++D+T + + W E R+ I I I D R
Sbjct: 70 FHALGPIYYRDADGALLVYDITDAESFRKVRTWVRELRRIVGDDISICIAGNKSDLHRNR 129
Query: 218 -LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRN 273
+P D +AR YA+++ A F +SA N + +F + ++ K+
Sbjct: 130 KVPED-------EARRYAESVGAAHFDTSAKLNRGLEDVFVELTRRMLERAGGKKKK 179
>gi|330793802|ref|XP_003284971.1| hypothetical protein DICPUDRAFT_96892 [Dictyostelium purpureum]
gi|325085092|gb|EGC38506.1| hypothetical protein DICPUDRAFT_96892 [Dictyostelium purpureum]
Length = 194
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 96 SDLVSLKISLLGDCQIGKTSFVKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
SD KI L+GD +GKTS + ++ QE S+ M ++ NK +++ G + IWD
Sbjct: 2 SDPDVFKILLIGDSAVGKTSLLLKFADDTFQETSVNMTSVDYKNKNIVIDGRTFSLQIWD 61
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWN-QTAIPILIGTKF 212
G R + A +L ++D+T + T N++ W E ++ Q +L+G KF
Sbjct: 62 TAGQERFRTITSSFYRGAHGVLVVYDMTDQGTYNNVKLWMQEINRYAVQGVSKVLVGNKF 121
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
D D + +T A+ YA +++ +SA NV + F + +++
Sbjct: 122 D-----QDDRKVVSSTVAKEYADSIEIPFLETSAKTGFNVEQAFSTMANEIY 168
>gi|125980342|ref|XP_001354195.1| GA20071 [Drosophila pseudoobscura pseudoobscura]
gi|195167530|ref|XP_002024586.1| GL22545 [Drosophila persimilis]
gi|54642500|gb|EAL31247.1| GA20071 [Drosophila pseudoobscura pseudoobscura]
gi|194107991|gb|EDW30034.1| GL22545 [Drosophila persimilis]
Length = 219
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 10/168 (5%)
Query: 101 LKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GDC GKT V GN ER G++ KT+ V+ +I IWD G
Sbjct: 22 FKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIEVEAKQIKLQIWDTAGQE 81
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFDDFVR 217
R + A +L ++D+T R + +++ W E R++ + + ILIG K D
Sbjct: 82 RFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILIGNKCDLETE 141
Query: 218 LPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D + +AR + + LF +SA N+NV F+ + +L
Sbjct: 142 REVDFE-----EARQMCQYIPEILFVMETSAKENMNVEDAFRCLATEL 184
>gi|241124292|ref|XP_002404123.1| RAB-19, 41 and, putative [Ixodes scapularis]
gi|215493584|gb|EEC03225.1| RAB-19, 41 and, putative [Ixodes scapularis]
Length = 208
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 10/170 (5%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GDC +GKT V G ER G++ KTL V+G ++ IWD G
Sbjct: 11 FKIVLIGDCGVGKTCVVHRFKSGMYVERHGNTIGVDFAMKTLTVEGKKVKLQIWDTAGQE 70
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFD--DF 215
R + A ++ ++D+T R + S+ W E R++ + +P +LIG K D
Sbjct: 71 RFRTITQSYYRSANGVIIVYDITKRSSFLSLPRWVEEVRRYTGSNVPLLLIGNKCDSESL 130
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
+ P+ +A Q + ++ +SA N N+ F + +L N
Sbjct: 131 REVTPEEAQGLAEQYPEFMAVLE-----TSAKENTNIEAAFVALATELKN 175
>gi|427787063|gb|JAA58983.1| Putative rab subfamily protein of small gtpase [Rhipicephalus
pulchellus]
Length = 208
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 4/167 (2%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GDC +GKT V G ER G++ KTL V+G ++ IWD G
Sbjct: 11 FKIVLIGDCGVGKTCVVHRFKSGMYVERHGNTIGVDFAMKTLTVEGKKVKLQIWDTAGQE 70
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R + A ++ ++D+T R + S+ W E R++ + +P+L+ D L
Sbjct: 71 RFRTITQSYYRSANGVIIVYDITKRSSFLSLPRWVEEVRRYTGSNVPLLLVGNKCDCESL 130
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
Q A Y + M AT+ +SA N N+ +F + +L N
Sbjct: 131 REVTQEEAQALADQYPEFM-ATI-ETSAKENTNIESVFVMLATELKN 175
>gi|348668632|gb|EGZ08456.1| hypothetical protein PHYSODRAFT_565187 [Phytophthora sojae]
Length = 200
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 6/158 (3%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
+K+ LLGD +GK+S V ++V N + S G + ++K ++V I + IWD G
Sbjct: 12 VKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
+ P+ + A A + ++D+T + +L ++ W E ++ I I I D
Sbjct: 72 KYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIAGNKSDL--- 128
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ + A+QARAYA+ + A +SA + NV+ +F
Sbjct: 129 -EEKREVPASQARAYAEEIGALFIETSAKEDTNVSDLF 165
>gi|307170291|gb|EFN62646.1| Ras-related protein Rab-43 [Camponotus floridanus]
Length = 223
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GDC GKT V+ G ER G++ KT+++ G RI IWD G
Sbjct: 24 FKIVLIGDCGTGKTCVVQRFRSGTFVERHGNTIGVDFTMKTVLIDGKRIKLQIWDTAGQE 83
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI-PILIGTKFDDFVR 217
R + A ++ ++D+T R T S+ W E R+++ + + +L+G K D
Sbjct: 84 RFRTITQSYYRCANGVIVVYDITKRSTFLSLQRWVEEVRRYSSSHVLLVLVGNKCD---- 139
Query: 218 LPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
+L+ +A A + + L +SA N N++ IF ++ ++L
Sbjct: 140 -LENLREVQKAEAEALCEYLPEVLHVVETSAKDNTNIDSIFFYLASEL 186
>gi|73535747|pdb|1Z08|A Chain A, Gppnhp-Bound Rab21 Q53g Mutant Gtpase
gi|73535748|pdb|1Z08|B Chain B, Gppnhp-Bound Rab21 Q53g Mutant Gtpase
gi|73535749|pdb|1Z08|C Chain C, Gppnhp-Bound Rab21 Q53g Mutant Gtpase
gi|73535750|pdb|1Z08|D Chain D, Gppnhp-Bound Rab21 Q53g Mutant Gtpase
Length = 170
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + G + + K L + G R+ +IWD G
Sbjct: 6 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQ 65
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 66 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 122
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 123 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 160
>gi|409075969|gb|EKM76344.1| hypothetical protein AGABI1DRAFT_115896 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426192906|gb|EKV42841.1| hypothetical protein AGABI2DRAFT_195613 [Agaricus bisporus var.
bisporus H97]
Length = 220
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 89/178 (50%), Gaps = 12/178 (6%)
Query: 96 SDLVSLKISLLGDCQIGKTSFVKYVGNEQ----ERSLQMAGLNLINKTLMVQGARIAFSI 151
S +++K+ L+G+ +GK+S + +EQ + S G++ + V+G +I SI
Sbjct: 8 SQPMNVKLLLIGNSSVGKSSLLLRFSDEQWLPEDESSATIGVDFRVHKMEVKGKKIKLSI 67
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGT 210
WD G R + A I+ ++D+++R T ++ WYSE + + + I IL+G
Sbjct: 68 WDTAGQERFRTITSSYYRGAQGIILVYDVSNRETFEALPRWYSELETYVSSSVIKILVGN 127
Query: 211 KFD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLP 267
K D +F R A + + +A+ M + +SA ++ V ++F ++ K+ P
Sbjct: 128 KLDKEFSRQ------VTAAEGQQFAERMGSLFIEASAKTSVGVKEVFTEVVEKILETP 179
>gi|118375516|ref|XP_001020942.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|89302709|gb|EAS00697.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
gi|307777796|dbj|BAJ21294.1| Rab-family small GTPase Rab5B [Tetrahymena thermophila]
Length = 197
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
+K+ +LGD +GKTS + N+ E S G + I K L F IWD G
Sbjct: 7 IKVVILGDAGVGKTSILNRFSNKGFDENSQTTLGASFIPKVLTRGDKTYKFQIWDTAGQE 66
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVR 217
+ P+ +D A L ++D+T+R + + + W E R+ I I ++G K D R
Sbjct: 67 KYRSLAPLYYRDTHAALIVYDITNRASFDVLKKWVQELREHGPANITIAVVGNKVDLIDR 126
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAK 262
D+++ +A+ YA + A ++SA N N+ +F I K
Sbjct: 127 --EDVKY---DEAKQYANELNAIFQYTSAKENQNIESLFIQIAEK 166
>gi|167385851|ref|XP_001737516.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165899672|gb|EDR26216.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 713
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 90/182 (49%), Gaps = 10/182 (5%)
Query: 101 LKISLLGDCQIGKTSFVK-YVGNEQERSLQ-MAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI ++GD +GKTS VK YV + + L+ G+++ NKT+ + G I S +D G
Sbjct: 520 FKIIVIGDASVGKTSLVKRYVDRKFYKELKPTIGVDIKNKTININGENICLSFFDTAGQE 579
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPIL-IGTKFDDFVR 217
+ K A A + ++D+T T NS+ WY++ R IP+L IG K D V
Sbjct: 580 KFAAVTDSYFKGAKACIIVYDITKAVTFNSVDKWYNKLRNIVSDPIPVLIIGNKLD--VE 637
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIG 277
D+ + + A+ + A +S + NV+K K I ++ N V +NL++
Sbjct: 638 QQRDITADVGA---SLARKLGAFFIETSCLNGSNVDKAIKIISNEISN--NKVVKNLSLA 692
Query: 278 EP 279
+P
Sbjct: 693 QP 694
>gi|195375225|ref|XP_002046402.1| GJ12523 [Drosophila virilis]
gi|194153560|gb|EDW68744.1| GJ12523 [Drosophila virilis]
Length = 220
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 10/168 (5%)
Query: 101 LKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GDC GKTS ++ GN ER G++ KT+ V+G ++ IWD G
Sbjct: 22 FKIVLIGDCCTGKTSILQRFKTGNYVERHGNTIGVDFSMKTIEVEGKQVKLQIWDTAGQE 81
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFDDFVR 217
R + ++ ++D+T R T ++ W E R++ + + ILIG K D
Sbjct: 82 RFRTITQSYYRANNGVIIVYDITKRSTFANLQKWIEEVRRYTASNVLIILIGNKCDLEAE 141
Query: 218 LPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D + +AR + + LF +SA N NV F+ + +L
Sbjct: 142 REVDFE-----EARQMCQYIPEILFVMETSAKENTNVEDAFRCLATEL 184
>gi|321465957|gb|EFX76955.1| hypothetical protein DAPPUDRAFT_305964 [Daphnia pulex]
Length = 213
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 91/187 (48%), Gaps = 14/187 (7%)
Query: 84 LSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLM 141
+SR F S + KI LLG+ +GKTS V +YV ++ E+ + + K +
Sbjct: 1 MSRNFGSNLGQ----LHFKIVLLGEGCVGKTSLVLRYVEDKFHEKHFSTIQASFLTKKIN 56
Query: 142 VQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WN 200
++G R+ +IWD G R PI +D+ A + ++D+T + + + W E R+
Sbjct: 57 LEGQRVTLAIWDTAGQERFHALGPIYYRDSHAAILVYDITDQDSFVKVQNWVKELRRILG 116
Query: 201 QTAIPILIGTKFD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 259
+ ++G K D D R P A +A Y+K++ AT + +SA N + ++F +
Sbjct: 117 DKVVLAIVGNKIDLDKERNVP------AEEALEYSKSVGATHYQTSAKTNRGIEELFLDL 170
Query: 260 MAKLFNL 266
+L +
Sbjct: 171 TQQLLRM 177
>gi|123410263|ref|XP_001303658.1| guanine nucleotide regulatory protein [Trichomonas vaginalis G3]
gi|67944367|gb|AAY83819.1| small Rab GTPase Rab11b [Trichomonas vaginalis]
gi|72536126|gb|AAZ73171.1| small Rab GTPase Rab11 [Trichomonas vaginalis]
gi|121885054|gb|EAX90728.1| guanine nucleotide regulatory protein, putative [Trichomonas
vaginalis G3]
Length = 211
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQ--ERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
LKI L+GD +GKT+ + +Q S G+ +KT+ ++G I IWD G
Sbjct: 10 LKIVLIGDSGVGKTNLLARFTRDQFNPESKSTIGVEFASKTMQIEGKTIKAQIWDTAGQE 69
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKFDDFVR 217
R + A+ L ++D+T+ T NS+ W E R+ ++ I +L+G K D
Sbjct: 70 RYRAITSAYYRGAIGALLLYDITASLTFNSLEKWLKELRENADEKIIVMLVGNKCD---- 125
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
+ + + A +AKA +SA NVN+ F+ ++ ++ N
Sbjct: 126 -LSEQRAVTSANALEFAKAQNLLFIETSAREATNVNEAFQTLICEIVN 172
>gi|123471393|ref|XP_001318896.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121901667|gb|EAY06673.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 198
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 100 SLKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S+K+ LLGD GKTS +K + + ++L G + + + + + IWD GD
Sbjct: 6 SIKVVLLGDSSCGKTSLIKAWMLEDNPTKTLATVGASFRRQFVDIDDIQYCIDIWDTAGD 65
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFDDFV 216
+ +P+ C+ A +FD+T T NS+ W E K + +P ILIG K D
Sbjct: 66 EKYSSTIPLYCRSAFGAFIVFDVTRPETFNSVSKWI-EILKQSAGDVPYILIGNKADLVD 124
Query: 217 RLPPDLQWTIATQARA--YAKAMKATLFFSSATHNINVNKIFKFI-MAKLFNLPWTVKRN 273
R+ I TQ +A YA +K F +SA +NV F + MA + V+R+
Sbjct: 125 RI-------IVTQEQANEYASTLKVDYFDTSALTGLNVEDAFSALAMAAVQASKEDVQRS 177
Query: 274 LT 275
T
Sbjct: 178 TT 179
>gi|195558515|ref|XP_002077302.1| GD11278 [Drosophila simulans]
gi|194202401|gb|EDX15977.1| GD11278 [Drosophila simulans]
Length = 215
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 8/168 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQ--ERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI +LGDC +GK+ + +++ E+ + G++ +++ V G + IWD GD
Sbjct: 8 FKILVLGDCGVGKSCLLMRFSDDRFTEKYVCTVGIDFRVRSVEVTGRMVMLQIWDTAGDE 67
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVR 217
R +P + A IL ++D+TS + SI GW E + ++ + L+G K DD
Sbjct: 68 RFKSLLPSYYRGATGILLVYDITSSKSFRSIDGWLEEIHRMCPESVNVLLVGNKCDDL-- 125
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
D + Q YA SA NVN +F + ++N
Sbjct: 126 ---DNRQVRLEQGFNYANLRAIGFHEVSAKSGANVNDVFNTLSVGIYN 170
>gi|195135342|ref|XP_002012093.1| GI16780 [Drosophila mojavensis]
gi|193918357|gb|EDW17224.1| GI16780 [Drosophila mojavensis]
Length = 219
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 10/168 (5%)
Query: 101 LKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GDC GKTS ++ GN ER G++ KT+ V+G ++ IWD G
Sbjct: 22 FKIVLIGDCCTGKTSILQRFKTGNYVERHGNTIGVDFSMKTIEVEGKQVKLQIWDTAGQE 81
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFDDFVR 217
R + ++ ++D+T R T ++ W E R++ + + ILIG K D
Sbjct: 82 RFRTITQSYYRANNGVIIVYDITKRATFANLQKWIEEVRRYTASNVLIILIGNKCDLESE 141
Query: 218 LPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D + +AR + + LF +SA N NV F+ + +L
Sbjct: 142 REVDFE-----EARQMCQYIPEILFVMETSAKENTNVEDAFRCLATEL 184
>gi|212537727|ref|XP_002149019.1| RAB GTPase Ypt5, putative [Talaromyces marneffei ATCC 18224]
gi|210068761|gb|EEA22852.1| RAB GTPase Ypt5, putative [Talaromyces marneffei ATCC 18224]
Length = 218
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 7/191 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQE--RSLQMAGLNLINKTLMVQGARIAFSIWDV 154
K+ LLG+ +GK+S V ++V ++ + R + L + + + F IWD
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDT 74
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFD 213
G R P+ ++A + ++D+T +L+ W E R+ N+ I L G K
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKSWVKELQRQANENIIIALAGNKL- 133
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRN 273
D V PD + A AYAK F +SA N NV ++F I KL L RN
Sbjct: 134 DLVTENPDKRAIATADAEAYAKEAGLLFFETSAKTNTNVKELFTAIAKKL-PLDQAGPRN 192
Query: 274 L-TIGEPIIDF 283
L T P +D
Sbjct: 193 LRTNARPGVDL 203
>gi|195350792|ref|XP_002041922.1| GM11275 [Drosophila sechellia]
gi|194123727|gb|EDW45770.1| GM11275 [Drosophila sechellia]
Length = 215
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 8/168 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQ--ERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI +LGDC +GK+ + +++ E+ + G++ +++ V G + IWD GD
Sbjct: 8 FKILVLGDCGVGKSCLLMRFSDDRFTEKYVCTVGIDFRVRSVEVTGRMVMLQIWDTAGDE 67
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVR 217
R +P + A IL ++D+TS + SI GW E + ++ + L+G K DD
Sbjct: 68 RFKSLLPSYYRGATGILLVYDITSSKSFRSIDGWLEEIHRMCPESVNVLLVGNKCDDL-- 125
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
D + Q YA SA NVN +F + ++N
Sbjct: 126 ---DNRQVRLEQGFNYANLRAIGFHEVSAKSGANVNDVFNTLSVGIYN 170
>gi|302815420|ref|XP_002989391.1| rab family GTPase [Selaginella moellendorffii]
gi|300142785|gb|EFJ09482.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 82/172 (47%), Gaps = 17/172 (9%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWDVG 155
K+ LLGD ++GKTS V +YV N+ Q ++Q + + K L V GA SIWD
Sbjct: 11 FKVVLLGDGEVGKTSLVLRYVNNQFSDSQSATIQAS---YLTKRLSVDGAVATLSIWDTA 67
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW--NQTAIPILIGTKFD 213
G R PI +DA L ++D+ R + + W E RK N+ + + G K D
Sbjct: 68 GQERFHALGPIYYRDADGALLVYDIMDRDSFTRVKNWVKELRKMASNKNIVLTIAGNKSD 127
Query: 214 -DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
D +R DLQ + YA ++ A F +SA N +++ F I +
Sbjct: 128 MDKLR-QVDLQ-----DSERYAASIGANHFVTSAKLNTGIDEAFMDIATRCL 173
>gi|356533295|ref|XP_003535201.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 212
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 23/198 (11%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTS-FVKYVGNEQERSLQMAGLNLINKTLMVQGARI 147
SSGYD +S KI L+GD +GK+S V ++ N E G++ K L V G R+
Sbjct: 8 SSGYD-----LSFKILLIGDSAVGKSSLLVSFISNSAEDIAPTIGVDFKIKMLTVGGKRL 62
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVG-WYSEARKW--NQTAI 204
+IWD G R + A I+ ++D+T R T ++ W E + NQ +
Sbjct: 63 KLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRDTFTNLSEVWSKEVELYSTNQNCV 122
Query: 205 PILIGTKFD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
+L+G K D D R+ + A A+ + F SA NV + F+ + K+
Sbjct: 123 KMLVGNKVDRDSERVVS------KEEGLALAEELGCLFFECSAKTRENVERCFEELALKI 176
Query: 264 FNLP-------WTVKRNL 274
+P VKRN+
Sbjct: 177 MEVPSLLEEGSTAVKRNI 194
>gi|168021891|ref|XP_001763474.1| Rab21-family small GTPase [Physcomitrella patens subsp. patens]
gi|162685267|gb|EDQ71663.1| Rab21-family small GTPase [Physcomitrella patens subsp. patens]
Length = 208
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
+ +K+ +LGD ++GKTS ++YV N E+ + + + K L V G ++ IWD G
Sbjct: 7 LQIKLVILGDGRVGKTSLALRYVHNVFSEKQMATIQASFLTKRLTVDGQVVSLCIWDTAG 66
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDF 215
R PI +DA A L ++DL + + + + W E +K I + I G K D
Sbjct: 67 QERFHALGPIYYRDADAALLVYDLLDKDSFDRVQSWVRELKKMASKNIVLSIAGNKSDMA 126
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L ++Q A YA+++ AT F +SA N + + F
Sbjct: 127 KSLHGNMQ-----DAEMYAESIGATHFVTSAKLNAGIEETF 162
>gi|294460994|gb|ADE76067.1| unknown [Picea sitchensis]
Length = 209
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 14/161 (8%)
Query: 102 KISLLGDCQIGKTSFV-KYV----GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
K+ LLGD ++GKTS V +YV + Q ++Q + L K L + G + SIWD G
Sbjct: 13 KLVLLGDGRVGKTSLVLRYVDDVFSDSQTATVQASYLT---KRLNINGVVVTLSIWDTAG 69
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
R PI +DA A L ++D+ + + + W E R+ I + I D V
Sbjct: 70 QERFHALGPIYYRDADAALLVYDIMDKDSFTRVRNWVKELRQMASKDIILAIAANKSDLV 129
Query: 217 RLPP-DLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
R DLQ +A YA ++ A F +SA N + ++F
Sbjct: 130 RSQKIDLQ-----EAERYAASIGAKHFVTSAKLNTGIEQVF 165
>gi|325182080|emb|CCA16533.1| septumpromoting GTPbinding protein 1 putative [Albugo laibachii
Nc14]
Length = 114
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%)
Query: 164 VPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQ 223
+P+ C DAVAILFMFDL+ + TL SI WY + R N+ A P L+G K+D F + + Q
Sbjct: 44 LPLVCNDAVAILFMFDLSRKATLTSIKEWYRQVRSINKNAFPFLVGMKYDVFSKFNVEEQ 103
Query: 224 WTIATQAR 231
I Q R
Sbjct: 104 EDITKQVR 111
>gi|301116125|ref|XP_002905791.1| Rab5 family GTPase, putative [Phytophthora infestans T30-4]
gi|262109091|gb|EEY67143.1| Rab5 family GTPase, putative [Phytophthora infestans T30-4]
Length = 200
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 6/158 (3%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
+K+ LLGD +GK+S V ++V N + S G + ++K ++V I + IWD G
Sbjct: 12 VKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
+ P+ + A A + ++D+T + +L ++ W E ++ I I I D
Sbjct: 72 KYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIAGNKSDL--- 128
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ + A+QARAYA + A +SA + NV+ +F
Sbjct: 129 -EEKREVPASQARAYAGEIGALFIETSAKEDTNVSDLF 165
>gi|302758026|ref|XP_002962436.1| rab family GTPase [Selaginella moellendorffii]
gi|300169297|gb|EFJ35899.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 82/172 (47%), Gaps = 17/172 (9%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWDVG 155
K+ LLGD ++GKTS V +YV N+ Q ++Q + + K L V GA SIWD
Sbjct: 11 FKVVLLGDGRVGKTSLVLRYVNNQFSDSQSATIQAS---YLTKRLSVDGAVATLSIWDTA 67
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW--NQTAIPILIGTKFD 213
G R PI +DA L ++D+ R + + W E RK N+ + + G K D
Sbjct: 68 GQERFHALGPIYYRDADGALLVYDIMDRDSFTRVKNWVKELRKMASNKNIVLTIAGNKSD 127
Query: 214 -DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
D +R DLQ + YA ++ A F +SA N +++ F I +
Sbjct: 128 MDKLR-QVDLQ-----DSERYAASIGANHFVTSAKLNTGIDEAFMDIATRCL 173
>gi|195127279|ref|XP_002008096.1| GI12014 [Drosophila mojavensis]
gi|193919705|gb|EDW18572.1| GI12014 [Drosophila mojavensis]
Length = 424
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 11/133 (8%)
Query: 89 SSGYDTDSDL-VSLKISLLGDCQIGKTSFV------KYVGNEQERSLQMAGLNLINKTLM 141
+ G D D D + K+ +LGD +GKTS + +YV + L G++ NK ++
Sbjct: 214 TPGQDEDEDFDIMGKVIMLGDSGVGKTSLLIRFRDGRYVPSY---FLSTVGIDFRNKVVV 270
Query: 142 VQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQ 201
V G R+ IWD G R +DA A+L ++D+T++ T ++I W E R++ Q
Sbjct: 271 VDGTRVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQ 330
Query: 202 TAIPI-LIGTKFD 213
+ I LIG K D
Sbjct: 331 EDVVIVLIGNKAD 343
>gi|198466657|ref|XP_002135235.1| GA23949 [Drosophila pseudoobscura pseudoobscura]
gi|198150700|gb|EDY73862.1| GA23949 [Drosophila pseudoobscura pseudoobscura]
Length = 417
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 70/140 (50%), Gaps = 13/140 (9%)
Query: 84 LSRTFSSGYDTDSDL---VSLKISLLGDCQIGKTSFV------KYVGNEQERSLQMAGLN 134
L R SSG D D + K+ +LGD +GKTS + +YV L G++
Sbjct: 200 LIRMISSGNGPDEDEDFDIMGKVIMLGDSGVGKTSLLIRFRDGRYV---PSYFLSTVGID 256
Query: 135 LINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYS 194
NK ++V G R+ IWD G R +DA A+L ++D+T++ T ++I W
Sbjct: 257 FRNKVVVVDGTRVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLG 316
Query: 195 EARKWNQTAIPI-LIGTKFD 213
E R++ Q + I LIG K D
Sbjct: 317 EIREYAQEDVVIVLIGNKAD 336
>gi|91086487|ref|XP_970606.1| PREDICTED: similar to rab 19, 41 and [Tribolium castaneum]
gi|270009806|gb|EFA06254.1| hypothetical protein TcasGA2_TC009113 [Tribolium castaneum]
Length = 221
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQ--ERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GDC GKT V+ N ER G++ KT+MV G ++ IWD G
Sbjct: 22 FKIVLIGDCGTGKTCIVQRFKNGTFIERHGNTIGVDFSMKTVMVDGKKVKLQIWDTAGQE 81
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVR 217
R + A ++ ++D+T R + S+ W E R+++ +++ + L+G K D
Sbjct: 82 RFRTITQSYYRSANGVIIVYDITKRSSFLSVARWVEEVRRYSGSSVLLALVGNKAD---- 137
Query: 218 LPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
L+ +A A + M LF +SA N N+ + F + +L
Sbjct: 138 -MESLREVEFEEAEAMCQYMPEVLFVLEASAKDNSNIEEAFLCLATEL 184
>gi|401828567|ref|XP_003887997.1| Rab GTPase [Encephalitozoon hellem ATCC 50504]
gi|392999005|gb|AFM99016.1| Rab GTPase [Encephalitozoon hellem ATCC 50504]
Length = 203
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 5/158 (3%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDSR 159
KI +LG+ +GKT + KY ++ ++SL G++ ++K +++ G + +IWD G R
Sbjct: 11 KIIVLGESDVGKTCLLHKYKEDDFKQSLMTTIGVDTVSKNIVLNGKNVMLNIWDTAGQER 70
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLP 219
F ++A IL +FD++ T + + W+ R+ L+G K D ++
Sbjct: 71 FFSITKSYYRNADGILLIFDISDERTFSCVDRWFGRIREETGNVPLFLVGNKRD---KVD 127
Query: 220 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 257
+ + ++ ++ A MKA + +SA NVN IF+
Sbjct: 128 STTYYEMESRFKSKADEMKAQYYTTSAKTGENVNNIFE 165
>gi|194688230|gb|ACF78199.1| unknown [Zea mays]
gi|195637900|gb|ACG38418.1| ras-related protein RHN1 [Zea mays]
gi|413933484|gb|AFW68035.1| Ras protein RHN1 [Zea mays]
Length = 203
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
K+ LLGD GK+S V ++V + QE ++ G ++TL V + F IWD G
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTI---GAAFFSQTLAVNDETVKFEIWDTAG 69
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFDDF 215
R P+ + A A + ++D+T+ + W E + + NQ I L G K D
Sbjct: 70 QERYHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNQNTIVALAGNKADML 129
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKLF 264
D + A +A+AYA+ + LFF +SA INVN IF I KL
Sbjct: 130 -----DARQVPAEEAKAYAQ--ENGLFFMETSAKTAINVNDIFYEIAKKLL 173
>gi|395533067|ref|XP_003768585.1| PREDICTED: ras-related protein Rab-37 [Sarcophilus harrisii]
Length = 224
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Query: 76 TMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERS---LQMAG 132
T E GL +L S YD +S K+ LLGD +GKT F+ + + S + G
Sbjct: 10 TRENGLPQLFSPSSPSYD-----LSGKVMLLGDSGVGKTCFLIHFKDGAFLSRTFIATVG 64
Query: 133 LNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGW 192
++ NK + V G ++ IWD G R +DA A+L ++D+T+R + +I W
Sbjct: 65 IDFRNKVVTVDGTKVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNRSSFENIRAW 124
Query: 193 YSEARKWNQTAIPI-LIGTKFD 213
+E ++ Q + I L+G K D
Sbjct: 125 LTEIHEYAQRDVVIMLLGNKAD 146
>gi|300121531|emb|CBK22050.2| unnamed protein product [Blastocystis hominis]
Length = 298
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 81/164 (49%), Gaps = 7/164 (4%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDSR 159
K LGD GKTS + +++ + + + Q G++ ++KT++ I +WD G R
Sbjct: 70 KFVFLGDAGTGKTSIITRFIYDSFDPTYQSTIGIDFLSKTILYNNRPIRMQLWDTAGQER 129
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLP 219
+P +D+ + ++D++SR + ++++ W + R I +++G K D
Sbjct: 130 FQSLIPSYIRDSSVAVIVYDISSRSSFDNVMKWVRDVRDQRDEVILVIVGNKTD-----L 184
Query: 220 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D + + + A+ A F SSA N N++ +F+ ++ KL
Sbjct: 185 SDSRAVTIEEGQKLAEDNNAMFFESSAKCNYNIDTVFRKVVEKL 228
>gi|325192953|emb|CCA27337.1| ras family GTPase putative [Albugo laibachii Nc14]
Length = 308
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 101 LKISLLGDCQIGKTS-FVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI LLG+ ++GKTS ++Y+ E ++ + + ++K LMV R+ SIWD G
Sbjct: 12 FKIVLLGEGRVGKTSILLRYIKGEYTDQQVSTLQASYLDKRLMVDNTRVQLSIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R PI +DA + ++D+T + + W E R+ I ILI D R
Sbjct: 72 RFHALGPIYYRDADGAVLVYDITDEESFRKVRTWVKELRRIVGDEIDILIAGNKSDLHR- 130
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ +A YA ++ AT F +SA N + ++F
Sbjct: 131 ---NRKVNEEEANNYAASVGATHFSTSAKLNRGLEEVF 165
>gi|303388805|ref|XP_003072636.1| Rab GTPase [Encephalitozoon intestinalis ATCC 50506]
gi|303301777|gb|ADM11276.1| Rab GTPase [Encephalitozoon intestinalis ATCC 50506]
Length = 201
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 11/171 (6%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+G+ +GKT +K +E Q + G++ K+L V+G R+ IWD G
Sbjct: 9 FKIILIGNSGVGKTCLMKRYTDETYSFTQSSTIGVDFKIKSLEVEGERVKLQIWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKFDD--- 214
R + + A I+ +FD+ S+ + N++ W SE RK N+ I++G K DD
Sbjct: 69 RFRAIISNYYRGAHGIIIVFDMGSKESFNNLGDWLSEVRKNTNENVEIIILGNKVDDKEK 128
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
V +++ + K++ + +SA NI VN F+++ KL +
Sbjct: 129 IVITEEEIERFLGEN-----NIEKSSFYMTSAKDNICVNDSFEYLTRKLID 174
>gi|167523210|ref|XP_001745942.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775743|gb|EDQ89366.1| predicted protein [Monosiga brevicollis MX1]
Length = 194
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDSR 159
KI LLG +GKTS V +YV + E ++ G + L V G R+ +WD G R
Sbjct: 4 KIVLLGAQSVGKTSLVLRYVDDAFEDAVSSTIGASFFTHKLTVDGCRVKLQLWDTAGQER 63
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLP 219
P+ + + A L ++D+T+ +L+ + GW +E ++ T+ + I D ++
Sbjct: 64 FRSMAPMYYRGSSAALIVYDVTTPKSLDEVKGWMAELQRNTDTSTVMCICANKVDLLKDD 123
Query: 220 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
L + R+YAK A F +SA +N+ F ++ +L +
Sbjct: 124 AHL----VEKGRSYAKQTNAIFFETSAKTGAGINEAFMAVVRELIS 165
>gi|24641152|ref|NP_727472.1| Rab at 9Fb [Drosophila melanogaster]
gi|22832069|gb|AAN09277.1| Rab at 9Fb [Drosophila melanogaster]
gi|90855733|gb|ABE01228.1| IP08727p [Drosophila melanogaster]
gi|220952298|gb|ACL88692.1| Rab9Fb-PA [synthetic construct]
gi|220958860|gb|ACL91973.1| Rab9Fb-PA [synthetic construct]
Length = 214
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 8/168 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQ--ERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI +LGD +GK+ + + + E+ + G++ + + + G + IWD GD
Sbjct: 8 FKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDE 67
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVR 217
R +P + A IL ++D+TS + +I GW E R+ + ++ + L+G K DD
Sbjct: 68 RFKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDL-- 125
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
D + Q YA + SA NVN +F + ++N
Sbjct: 126 ---DNRQVRMEQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYN 170
>gi|340376053|ref|XP_003386548.1| PREDICTED: ras-related protein Rab-21-like [Amphimedon
queenslandica]
Length = 222
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 14/172 (8%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
+ +K+ LLG+ +GKTS V +YV N+ ++ +Q + + K L + R+ +IWD G
Sbjct: 11 LQVKVVLLGEGCVGKTSIVLRYVQNQFNDKHIQTLQASFLQKNLTINRRRLCLNIWDTAG 70
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFDDF 215
R PI +D+ A + ++D+T + W E RK + + +++G K
Sbjct: 71 QERYHALGPIYYRDSHAAIVVYDITDEDSFTKAKNWVRELRKMLGDSCVLVIVGNK---- 126
Query: 216 VRLPPDLQWTIATQ---ARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
DL+ Q A+ YA ++ A F++SA N + ++F + +L
Sbjct: 127 ----SDLEKNKVIQEKDAQEYAASVGAKHFYTSAKQNKGIEEMFLDLSKRLL 174
>gi|403366976|gb|EJY83296.1| Ras-like protein Rab-11A [Oxytricha trifallax]
Length = 255
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 8/181 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GD +GK++ + ++V NE +++Q G+ K++ ++G + IWD G
Sbjct: 14 FKIVLVGDSGVGKSNLLMRFVKNEFHQNMQTTIGVEFSTKSMQIEGQLVKAQIWDTAGQE 73
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFDDFVR 217
R ++AV L ++D+T R + ++ W SE A + IL+G K D
Sbjct: 74 RYRALTHAYYRNAVGALLIYDITDRQSFENLKKWQSELANHSEANTVMILVGNKCD---- 129
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIG 277
D + +A +A++ +SA + NVN FK ++ ++F + K N +
Sbjct: 130 -LSDQRAIKIEEAEKFAQSNNMAFIETSALNAKNVNIAFKNLITEIFKISQVGKFNQQVK 188
Query: 278 E 278
E
Sbjct: 189 E 189
>gi|426241217|ref|XP_004014488.1| PREDICTED: ras-related protein Rab-22A [Ovis aries]
gi|296481198|tpg|DAA23313.1| TPA: RAS-related protein RAB-22A [Bos taurus]
Length = 194
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 I----DVREVMERDAKDYADSIHAVFVETSAKNAININELF 159
>gi|195046772|ref|XP_001992215.1| GH24326 [Drosophila grimshawi]
gi|193893056|gb|EDV91922.1| GH24326 [Drosophila grimshawi]
Length = 201
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 7/167 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ ++GD +GK+S + ++ + G++ +T+++ G R+ IWD G
Sbjct: 9 FKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVVIDGLRVKLQIWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R + ++ ++D+T+ + ++ W E + +L+G K DD
Sbjct: 69 RFRTITSTYYRGTHGVIIVYDVTNGDSFANVRTWLEEIKHNCDVVNKVLVGNKNDD---- 124
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
PD + I A+ YA+ M LF +SA NINV +F I ++ N
Sbjct: 125 -PDRKVVITEDAQRYARQMDIELFETSAKDNINVEDMFMSITRQVLN 170
>gi|348552524|ref|XP_003462077.1| PREDICTED: ras-related protein Rab-22A-like [Cavia porcellus]
Length = 194
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 I----DVREVMERDAKDYADSIHAIFVETSAKNAININELF 159
>gi|209156126|gb|ACI34295.1| Ras-related protein Rab-5C [Salmo salar]
Length = 220
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGARI 147
+G + + K+ LLG+ +GK+S V ++V G QE G + +T+ + +
Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFQEYQESTIGAAFLTQTVCLDDTTV 70
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 206
F IWD G R P+ + A A + ++D+T+R T W E ++ I I
Sbjct: 71 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNRDTFTRAKNWVKELQRQASPNIVIA 130
Query: 207 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
L G K D + DLQ +A+AYA +SA +NVN+IF I KL
Sbjct: 131 LAGNKADVANKRAVDLQ-----EAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|178056610|ref|NP_001116646.1| ras-related protein Rab-22A [Sus scrofa]
gi|147225162|emb|CAN13146.1| RAB22A, member RAS oncogene family [Sus scrofa]
Length = 194
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 I----DVREVLERDAKDYADSIHAIFVETSAKNAININELF 159
>gi|397525605|ref|XP_003832751.1| PREDICTED: ras-related protein Rab-22A-like [Pan paniscus]
Length = 219
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 28 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 87
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 88 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 147
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 148 I----DVREVMERDAKDYADSIHAIFVETSAKNAININELF 184
>gi|344296537|ref|XP_003419963.1| PREDICTED: ras-related protein Rab-22A-like [Loxodonta africana]
Length = 194
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPDIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 I----DVREVMERDAKDYADSIHAVFVETSAKNAININELF 159
>gi|194752067|ref|XP_001958344.1| GF10872 [Drosophila ananassae]
gi|190625626|gb|EDV41150.1| GF10872 [Drosophila ananassae]
Length = 219
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 10/168 (5%)
Query: 101 LKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GDC GKT V GN ER G++ KT+ V+G +I IWD G
Sbjct: 22 FKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQE 81
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQT-AIPILIGTKFDDFVR 217
R + A +L ++D+T R + ++ W E R++ + + IL+G K D
Sbjct: 82 RFRTITQSYYRSANGVLIVYDITKRSSFANLQKWIEEVRRYTASNVLIILVGNKCD---- 137
Query: 218 LPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
+ + +AR + + LF +SA N+NV F+ + +L
Sbjct: 138 -LEEEREVDFEEARQMCQYIPEILFVMETSAKENMNVEDAFRCLATEL 184
>gi|417396853|gb|JAA45460.1| Putative gtpase [Desmodus rotundus]
Length = 194
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 I----DVREVMERDAKDYADSIHAIFVETSAKNAININELF 159
>gi|149030014|gb|EDL85106.1| RAB22A, member RAS oncogene family (predicted), isoform CRA_b
[Rattus norvegicus]
gi|165971249|gb|AAI58651.1| Rab22a protein [Rattus norvegicus]
Length = 194
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 83/168 (49%), Gaps = 6/168 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ +I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D++ + A+ YA ++ A +SA + IN+N++F I +L
Sbjct: 123 T----DVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRL 166
>gi|355714872|gb|AES05145.1| RAB22A, member RAS oncoprotein family [Mustela putorius furo]
Length = 193
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 I----DVREVMERDAKDYADSIHAIFVETSAKNAININELF 159
>gi|281205763|gb|EFA79952.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 493
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 9/181 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GKTS + G QE S+ M ++ + + G IA IWD G
Sbjct: 7 FKLLLIGDSSVGKTSLLLRFADGTFQETSVSMTAVDNKVHNVTIDGKTIALQIWDTAGQE 66
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFDDFVR 217
R + A ++ ++D+T + + N++ W E ++ + +L+G KFD
Sbjct: 67 RFRTITSSFYRGAHGVVVVYDMTDQASFNNVKLWMQEIHRYAFAGVSRVLVGNKFD---- 122
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIG 277
D + T + YA ++ +SA NV +IF I +++ LP + + T G
Sbjct: 123 -LDDRKVVSTTMVKEYADSLGIPFLEASAKTGFNVEQIFLTIANEIYKLPTGLSKG-TGG 180
Query: 278 E 278
E
Sbjct: 181 E 181
>gi|302563975|ref|NP_001180746.1| ras-related protein Rab-22A [Macaca mulatta]
gi|297707438|ref|XP_002830512.1| PREDICTED: ras-related protein Rab-22A [Pongo abelii]
gi|397469142|ref|XP_003806222.1| PREDICTED: ras-related protein Rab-22A [Pan paniscus]
gi|402882151|ref|XP_003904614.1| PREDICTED: ras-related protein Rab-22A [Papio anubis]
gi|426392268|ref|XP_004062478.1| PREDICTED: ras-related protein Rab-22A [Gorilla gorilla gorilla]
gi|380788255|gb|AFE66003.1| ras-related protein Rab-22A [Macaca mulatta]
gi|383420237|gb|AFH33332.1| ras-related protein Rab-22A [Macaca mulatta]
gi|410220672|gb|JAA07555.1| RAB22A, member RAS oncogene family [Pan troglodytes]
gi|410260092|gb|JAA18012.1| RAB22A, member RAS oncogene family [Pan troglodytes]
gi|410298900|gb|JAA28050.1| RAB22A, member RAS oncogene family [Pan troglodytes]
gi|410335379|gb|JAA36636.1| RAB22A, member RAS oncogene family [Pan troglodytes]
Length = 194
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 I----DVREVMERDAKDYADSIHAIFVETSAKNAININELF 159
>gi|194749449|ref|XP_001957151.1| GF10277 [Drosophila ananassae]
gi|190624433|gb|EDV39957.1| GF10277 [Drosophila ananassae]
Length = 403
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 11/137 (8%)
Query: 84 LSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV------KYVGNEQERSLQMAGLNLIN 137
+S T + D D D++ K+ +LGD +GKTS + +YV L G++ N
Sbjct: 190 ISSTNAPEDDEDFDIMG-KVIMLGDSGVGKTSLLIRFRDGRYV---PSYFLSTVGIDFRN 245
Query: 138 KTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR 197
K ++V G R+ IWD G R +DA A+L ++D+T++ T ++I W E R
Sbjct: 246 KVVVVDGTRVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIR 305
Query: 198 KWNQTAIPI-LIGTKFD 213
++ Q + I LIG K D
Sbjct: 306 EYAQEDVVIVLIGNKAD 322
>gi|50978970|ref|NP_001003208.1| ras-related protein Rab-22A [Canis lupus familiaris]
gi|3256092|emb|CAA80473.1| Rab22a protein [Canis lupus familiaris]
Length = 194
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 I----DVREVMERDAKDYADSIHAIFVETSAKNAININELF 159
>gi|126302779|ref|XP_001368849.1| PREDICTED: ras-related protein Rab-22A-like [Monodelphis domestica]
gi|395506750|ref|XP_003757693.1| PREDICTED: ras-related protein Rab-22A [Sarcophilus harrisii]
Length = 194
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 I----DVREVMERDAKDYADSIHAIFVETSAKNAININELF 159
>gi|395829258|ref|XP_003787777.1| PREDICTED: ras-related protein Rab-22A [Otolemur garnettii]
Length = 194
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 I----DVREVMERDAKDYADSIHAIFVETSAKNAININELF 159
>gi|431892057|gb|ELK02504.1| Ras-related protein Rab-21 [Pteropus alecto]
Length = 227
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 21 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 80
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 81 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 137
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 138 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 175
>gi|410335381|gb|JAA36637.1| RAB22A, member RAS oncogene family [Pan troglodytes]
Length = 196
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 I----DVREVMERDAKDYADSIHAIFVETSAKNAININELF 159
>gi|30583895|gb|AAP36196.1| Homo sapiens RAB22A, member RAS oncogene family [synthetic
construct]
gi|61370724|gb|AAX43543.1| RAB22A member RAS oncogene family [synthetic construct]
gi|61370733|gb|AAX43544.1| RAB22A member RAS oncogene family [synthetic construct]
Length = 195
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 I----DVREVMERDAKDYADSIHAIFVETSAKNAININELF 159
>gi|10190714|ref|NP_065724.1| ras-related protein Rab-22A [Homo sapiens]
gi|13633614|sp|Q9UL26.2|RB22A_HUMAN RecName: Full=Ras-related protein Rab-22A; Short=Rab-22
gi|9961232|gb|AAF00047.2|AF091034_1 GTP-binding protein RAB22A [Homo sapiens]
gi|16041684|gb|AAH15710.1| RAB22A, member RAS oncogene family [Homo sapiens]
gi|30582931|gb|AAP35695.1| RAB22A, member RAS oncogene family [Homo sapiens]
gi|39645547|gb|AAH63457.1| RAB22A, member RAS oncogene family [Homo sapiens]
gi|61361041|gb|AAX41977.1| RAB22A member RAS oncogene family [synthetic construct]
gi|119595902|gb|EAW75496.1| RAB22A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595903|gb|EAW75497.1| RAB22A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|193787092|dbj|BAG52298.1| unnamed protein product [Homo sapiens]
gi|208967238|dbj|BAG73633.1| RAB22A, member RAS oncogene family [synthetic construct]
Length = 194
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 I----DVREVMERDAKDYADSIHAIFVETSAKNAININELF 159
>gi|18568105|gb|AAL75941.1|AF125104_1 RAB22 [Homo sapiens]
Length = 194
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 I----DVREVMERDAKDYADSIHAIFVETSAKNAININELF 159
>gi|62858707|ref|NP_001016319.1| RAB21, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89266851|emb|CAJ82566.1| RAB21, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|213624296|gb|AAI70902.1| RAB21, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|213624300|gb|AAI70908.1| RAB21, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 221
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 8/180 (4%)
Query: 96 SDLVSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
S S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD
Sbjct: 13 SKTYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWD 72
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKF 212
G R PI +D+ + ++D+T + + W E RK I + ++G K
Sbjct: 73 TAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKV 132
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKR 272
D L + ++ +A YA+++ A + +SA N + ++F + ++ T +R
Sbjct: 133 D----LEKERHVSV-QEAETYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQTDER 187
>gi|2500067|sp|P55745.3|RAB21_CANFA RecName: Full=Ras-related protein Rab-21; Flags: Precursor
Length = 223
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 17 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 76
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 77 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 133
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 134 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 171
>gi|301759615|ref|XP_002915660.1| PREDICTED: ras-related protein Rab-21-like [Ailuropoda melanoleuca]
Length = 220
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 14 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 73
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 74 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 130
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 131 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 168
>gi|410965116|ref|XP_003989098.1| PREDICTED: ras-related protein Rab-21 [Felis catus]
Length = 222
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 16 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 75
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 76 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 132
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 133 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 170
>gi|350584261|ref|XP_003481707.1| PREDICTED: ras-related protein Rab-21-like [Sus scrofa]
Length = 222
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 16 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 75
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 76 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 132
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 133 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 170
>gi|291389571|ref|XP_002711381.1| PREDICTED: RAB21, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 15 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 74
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 75 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 131
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 132 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 169
>gi|73535743|pdb|1YZU|A Chain A, Gppnhp-Bound Rab21 Gtpase At 2.50 A Resolution
gi|73535744|pdb|1YZU|B Chain B, Gppnhp-Bound Rab21 Gtpase At 2.50 A Resolution
gi|73535774|pdb|1Z0I|A Chain A, Gdp-Bound Rab21 Gtpase
gi|146387038|pdb|2OT3|B Chain B, Crystal Structure Of Rabex-5 Vps9 Domain In Complex With
Nucleotide Free Rab21
Length = 170
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 6 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 65
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 66 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 122
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 123 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 160
>gi|10636479|emb|CAC10538.1| GTP-binding protein RAB22A [Homo sapiens]
Length = 194
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 I----DVREVMERDAKDYADSIHAIFVETSAKNAININELF 159
>gi|405951631|gb|EKC19528.1| Ras-related protein Rab-21 [Crassostrea gigas]
Length = 208
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K LLG+ +GKTS V +YV N+ ++ + + + K L + G R+ SIWD G
Sbjct: 10 SFKCVLLGEGCVGKTSLVLRYVENKFNDKHITTLQASFLTKKLNIGGKRVNLSIWDTAGQ 69
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + I G K D
Sbjct: 70 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNDICLCIAGNKID--- 126
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + ++A A AYA ++ A F +SA N + ++F
Sbjct: 127 -LEKERHVSVA-DAEAYAASVGAKHFHTSAKLNKGIEEMF 164
>gi|73535741|pdb|1YZT|A Chain A, Gppnhp-Bound Rab21 Gtpase At 2.05 A Resolution
gi|73535742|pdb|1YZT|B Chain B, Gppnhp-Bound Rab21 Gtpase At 2.05 A Resolution
Length = 184
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 20 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 79
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 80 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 136
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 137 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 174
>gi|281340633|gb|EFB16217.1| hypothetical protein PANDA_003669 [Ailuropoda melanoleuca]
Length = 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 15 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 74
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 75 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 131
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 132 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 169
>gi|148747177|ref|NP_077756.2| ras-related protein Rab-22A [Mus musculus]
gi|46577691|sp|P35285.2|RB22A_MOUSE RecName: Full=Ras-related protein Rab-22A; Short=Rab-22; AltName:
Full=Rab-14
gi|13879258|gb|AAH06596.1| RAB22A, member RAS oncogene family [Mus musculus]
gi|14422309|emb|CAC41378.1| RAB22A protein [Mus musculus]
gi|26327515|dbj|BAC27501.1| unnamed protein product [Mus musculus]
gi|74144602|dbj|BAE27289.1| unnamed protein product [Mus musculus]
gi|74151840|dbj|BAE29707.1| unnamed protein product [Mus musculus]
gi|112293001|dbj|BAF02878.1| Rab22A [Mus musculus]
gi|148674704|gb|EDL06651.1| RAB22A, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 194
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ +I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 T----DVREVMERDAKDYADSIHAIFVETSAKNAININELF 159
>gi|355714869|gb|AES05144.1| ras-related protein Rab-21 [Mustela putorius furo]
Length = 213
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 7 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 66
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 67 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 123
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 124 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 161
>gi|258578121|ref|XP_002543242.1| GTP-binding protein ypt5 [Uncinocarpus reesii 1704]
gi|237903508|gb|EEP77909.1| GTP-binding protein ypt5 [Uncinocarpus reesii 1704]
Length = 217
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 7/188 (3%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQE--RSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
K+ LLG+ +GK+S V ++V ++ + R + L + + + F IWD G
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 77
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFDDFV 216
R P+ ++A + ++D+T +L+ W E R+ N+ I L G K D V
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGNKL-DLV 136
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNL-T 275
PD + A A AYA+ F +SA + NV ++F I KL L RNL +
Sbjct: 137 TDSPDKRAVQAADAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKL-PLDQAGPRNLRS 195
Query: 276 IGEPIIDF 283
P +D
Sbjct: 196 SARPGVDL 203
>gi|296488008|tpg|DAA30121.1| TPA: ras-related protein Rab-21 [Bos taurus]
Length = 196
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 16 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 75
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 76 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVD--- 132
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 133 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 170
>gi|396082089|gb|AFN83701.1| GTP-binding protein [Encephalitozoon romaleae SJ-2008]
Length = 203
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 5/158 (3%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDSR 159
KI +LG+ +GKT + KY ++ ++SL G++ ++K++++ G I +IWD G R
Sbjct: 11 KIIVLGESDVGKTCLLHKYKEDDFKQSLMTTIGVDTVSKSIVLNGKNIMLNIWDTAGQER 70
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLP 219
F ++A IL +FD++ T + + W+ R+ L+G K D ++
Sbjct: 71 FFSITKSYYRNADGILLIFDISDERTFSCVDRWFGRIREETGNVPLFLVGNKRD---KVD 127
Query: 220 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 257
+ ++ A+ MKA + +SA NVN IF+
Sbjct: 128 SATYHAMEGNFKSKAEEMKARYYTTSAKTGENVNNIFE 165
>gi|195013859|ref|XP_001983918.1| GH15303 [Drosophila grimshawi]
gi|193897400|gb|EDV96266.1| GH15303 [Drosophila grimshawi]
Length = 426
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 11/133 (8%)
Query: 89 SSGYDTDSDL-VSLKISLLGDCQIGKTSFV------KYVGNEQERSLQMAGLNLINKTLM 141
+ G D + D + K+ +LGD +GKTS + +YV + L G++ NK ++
Sbjct: 216 TPGQDEEEDFDIMGKVIMLGDSGVGKTSLLIRFRDGRYVPSY---FLSTVGIDFRNKVVV 272
Query: 142 VQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQ 201
V G R+ IWD G R +DA A+L ++D+T++ T ++I W E R++ Q
Sbjct: 273 VDGTRVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQ 332
Query: 202 TAIPI-LIGTKFD 213
+ I LIG K D
Sbjct: 333 EDVVIVLIGNKAD 345
>gi|307203700|gb|EFN82666.1| Ras-related protein Rab-21 [Harpegnathos saltator]
Length = 243
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
+ K+ LLG+ +GKTS ++YV ++ +R + + +NK L + G R+ +IWD G
Sbjct: 13 NFKVVLLGEGCVGKTSVALRYVEDKFNDRHISTVQASFLNKKLNINGKRVNLAIWDTAGQ 72
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDFV 216
+ PI + + + ++D+T T + W E +K + I + I G K D
Sbjct: 73 EKFHALGPIYYRMSNGAILVYDITDEDTFQKVKNWVKELKKMLGSEICLAIAGNKVD--- 129
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L D I +A YAK + A F +SA N N+ ++F
Sbjct: 130 -LEKDRNVAIE-EAEEYAKQVGAMHFHTSAKLNQNIEEMF 167
>gi|51948448|ref|NP_001004238.1| ras-related protein Rab-21 [Rattus norvegicus]
gi|81884468|sp|Q6AXT5.1|RAB21_RAT RecName: Full=Ras-related protein Rab-21; Flags: Precursor
gi|50927400|gb|AAH79323.1| RAB21, member RAS oncogene family [Rattus norvegicus]
gi|149066960|gb|EDM16693.1| RAB21, member RAS oncogene family [Rattus norvegicus]
Length = 223
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 17 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 76
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 77 ERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 133
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 134 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 171
>gi|344266375|ref|XP_003405256.1| PREDICTED: ras-related protein Rab-21-like [Loxodonta africana]
Length = 222
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 16 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 75
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 76 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 132
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 133 -LERERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 170
>gi|359320530|ref|XP_003431485.2| PREDICTED: RAB21, member RAS oncogene family, partial [Canis lupus
familiaris]
Length = 214
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 8 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 67
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 68 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 124
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 125 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 162
>gi|393214870|gb|EJD00362.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 234
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 93/190 (48%), Gaps = 14/190 (7%)
Query: 94 TDSDLVSLKISLLGDCQIGKTSFVKYVGNEQ----ERSLQMAGLNLINKTLMVQGARIAF 149
+DS +++K+ L+G+ +GK+S + +EQ + + G++ + + G ++
Sbjct: 11 SDSSPINVKLLLIGNSSVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMEINGKKVKL 70
Query: 150 SIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILI 208
SIWD G R + A I+ ++D+ +R + ++ WYSE + + + + IL+
Sbjct: 71 SIWDTAGQERFRTITSSYYRGAQGIILVYDVANRESFAALPRWYSELGTYVSDSVVKILV 130
Query: 209 GTKFD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLP 267
G K D +F R P ++ A+A+ M + +SA + V + F ++ ++ + P
Sbjct: 131 GNKVDKEFSRQVP------TSEGAAFAQRMGSLFVEASAKTAVGVREAFTDVVERILDTP 184
Query: 268 --WTVKRNLT 275
W N+T
Sbjct: 185 ELWAPVSNVT 194
>gi|348676764|gb|EGZ16581.1| hypothetical protein PHYSODRAFT_314323 [Phytophthora sojae]
Length = 314
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 108/260 (41%), Gaps = 27/260 (10%)
Query: 27 SLFDRVSIF--RRFFRFIWER-----------ILVCSIGKQPAVRYQKLTRRSSSE--SS 71
SLFD V F R + R LV + G Q + Y +L ++ + ++
Sbjct: 25 SLFDDVETLTPHEFLRDFYTRQGLYDKLEDVDALVETYGHQMHILYAELDKKYGTSFCTN 84
Query: 72 PAPDTMEAGLVEL---SRTFSSGYDTDSDLVSL--KISLLGDCQIGKTSFVK--YVGNEQ 124
P P E + E S T+++ S + KI LLG+ +GKT+ + + G
Sbjct: 85 PPPVASETRIAEPVTPSYTYAAPTTPKSPGKAPVNKIVLLGNSGVGKTNLISRLHKGEFN 144
Query: 125 ERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRC 184
E G+ + + V A + IWD G R + + A L +FD+ +R
Sbjct: 145 EEFASTIGVEFLTHVVKVDNADVKAQIWDTAGQERFHAMMSTYYRKAAGALLVFDVGNRA 204
Query: 185 TLNSIVGWYSEARKWNQTAI-PILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFF 243
+L + W + + + L+G K D LP D + A +AR +A A
Sbjct: 205 SLQDVERWLDQLLNVAEPGLHATLVGNKCD----LPADKRAVTAEEARQFAAAHHMAYVE 260
Query: 244 SSATHNINVNKIFKFIMAKL 263
+SA +NV + F+ ++A +
Sbjct: 261 TSAKTGLNVEEAFRGLVAAI 280
>gi|56967660|gb|AAW31979.1| CG2532 [Drosophila melanogaster]
gi|56967672|gb|AAW31985.1| CG2532 [Drosophila melanogaster]
Length = 174
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 8/168 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQ--ERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI +LGD +GK+ + + + E+ + G++ + + + G + IWD GD
Sbjct: 8 FKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDE 67
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVR 217
R +P + A IL ++D+TS + +I GW E R+ + ++ + L+G K DD
Sbjct: 68 RFKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDL-- 125
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
D + Q YA + SA NVN +F + ++N
Sbjct: 126 ---DNRQVRMEQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYN 170
>gi|340052328|emb|CCC46604.1| putative small GTP-binding protein RAB6 [Trypanosoma vivax Y486]
Length = 223
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 14/185 (7%)
Query: 92 YDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAF 149
Y + K+ LLGD +GKTS + +++ E S G++ +KTL++ G +
Sbjct: 2 YSGGGTFLRYKVVLLGDQSVGKTSIITRFINGTFEESYHATIGIDFFSKTLLLDGVTVRL 61
Query: 150 SIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR--KWNQTAIPIL 207
+WD G R +P +D+ A L ++D+ SR + + W + R + N+T I +L
Sbjct: 62 HVWDTAGQERFRALIPGYIRDSAATLVVYDVASRLSFLNTFKWVDDVRALRGNETII-VL 120
Query: 208 IGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFS--SATHNINVNKIFKFIMAKLFN 265
+G K D+ R T A KA + + F+ SA V +FK + L
Sbjct: 121 VGNKSDEHERRE-------VTAEEAQEKADEYGIMFTEVSAMLGTGVGALFKKVAETLVL 173
Query: 266 LPWTV 270
TV
Sbjct: 174 AEGTV 178
>gi|56967662|gb|AAW31980.1| CG2532 [Drosophila melanogaster]
gi|56967664|gb|AAW31981.1| CG2532 [Drosophila melanogaster]
gi|56967668|gb|AAW31983.1| CG2532 [Drosophila melanogaster]
gi|56967674|gb|AAW31986.1| CG2532 [Drosophila melanogaster]
gi|56967676|gb|AAW31987.1| CG2532 [Drosophila melanogaster]
Length = 174
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 8/168 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQ--ERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI +LGD +GK+ + + + E+ + G++ + + + G + IWD GD
Sbjct: 8 FKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDE 67
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVR 217
R +P + A IL ++D+TS + +I GW E R+ + ++ + L+G K DD
Sbjct: 68 RFKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDL-- 125
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
D + Q YA + SA NVN +F + ++N
Sbjct: 126 ---DNRQVRMEQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYN 170
>gi|345492946|ref|XP_003426961.1| PREDICTED: ras-related protein Rab-43-like [Nasonia vitripennis]
Length = 221
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GDC GKT V+ GN +R G++ KT++V G R+ IWD G
Sbjct: 23 FKIVLIGDCGTGKTCIVQKFRSGNFIQRHGNTIGVDFSMKTVLVDGKRVKLQIWDTAGQE 82
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI-PILIGTKFDDFVR 217
R + A ++ ++D+T R + S+ W E R++ + + IL+G K D
Sbjct: 83 RFRTITQSYYRSANGVILVYDITKRSSFLSLQRWIDEIRRYTSSHVLLILVGNKCD---- 138
Query: 218 LPPDLQWTIATQARAYAKAMKAT--LFFSSATHNINVNKIFKFIMAKL 263
D + +A A + + + +SA N N++ IF + ++L
Sbjct: 139 -LEDAREVQKAEAEAVCEYLPEVFRIVETSAKENTNIDSIFFCLASEL 185
>gi|302780591|ref|XP_002972070.1| rab family GTPase [Selaginella moellendorffii]
gi|300160369|gb|EFJ26987.1| rab family GTPase [Selaginella moellendorffii]
Length = 205
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 101/192 (52%), Gaps = 17/192 (8%)
Query: 80 GLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLIN 137
GL LS D+ + +K+ LLGD +GK+ V ++V + + S ++ G + ++
Sbjct: 11 GLPHLSDGSLENGSQDTKHLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSSKVTVGASFLS 70
Query: 138 KTLMVQ-GARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEA 196
+T+ +Q + + F IWD G R P+ + A A + ++DLTS+ + W E
Sbjct: 71 QTIALQDSSTVKFEIWDTAGQERYASLAPLYYRGASAAVVVYDLTSKESFQKAQYWVKEL 130
Query: 197 RKWNQTAIPI-LIGTKFD-DFVRLPPDLQWTIAT-QARAYAKAMKATLFFSSATHNI--N 251
+K I + L+G K D D +R T++T +ARAYA++ ++FF+ A+ N
Sbjct: 131 QKHANAGIVLALVGNKADLDNLR-------TVSTDEARAYAESN--SMFFTEASAKTAGN 181
Query: 252 VNKIFKFIMAKL 263
+N++F+ I +L
Sbjct: 182 INEVFEEIAKRL 193
>gi|167389639|ref|XP_001739030.1| GTP-binding protein ryH1 [Entamoeba dispar SAW760]
gi|165897453|gb|EDR24605.1| GTP-binding protein ryH1, putative [Entamoeba dispar SAW760]
Length = 196
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 13/182 (7%)
Query: 98 LVSLKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVG 155
L+ KI LGD +GKT + G+ G + KT+ Q I IWD
Sbjct: 4 LMKQKIVFLGDSSVGKTCIIGRFMTGDFSTGYEATIGTDFSTKTMTFQNKSIQLQIWDTA 63
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDD 214
G R +P +D+ A + ++D+ R + ++ W + R + I + L+G K
Sbjct: 64 GQERYRSLIPSYIRDSSAAVIVYDINDRQSFENVDKWIEDVRSKEKGEIFLFLVGNKL-- 121
Query: 215 FVRLPPDLQWTIATQARAYAKAM--KATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKR 272
DL TQ A AK + T F +SA NIN+ ++F I KL L V+
Sbjct: 122 ------DLGHREVTQKEALAKGQNYQCTCFETSAKTNINITELFNAITEKLSTLEPPVEE 175
Query: 273 NL 274
++
Sbjct: 176 HI 177
>gi|156547415|ref|XP_001604485.1| PREDICTED: ras-related protein Rab-21-like [Nasonia vitripennis]
Length = 222
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 8/166 (4%)
Query: 94 TDSDLVSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSI 151
+++ + K+ LLG+ +GKTS V +YV ++ ++ + + K L + G R+ +I
Sbjct: 4 SNASAYNFKVVLLGEGCVGKTSVVLRYVEDKFNDKHISTLQASFFKKKLNINGKRVNLAI 63
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GT 210
WD G + PI + + + ++D+T T + W E +K + I + I G
Sbjct: 64 WDTAGQEKFHALGPIYYRMSNGAILVYDITDEETFKKVKNWVKELKKMLGSDICLAIAGN 123
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
K D L + TI +A YAK + A F +SA N+NV ++F
Sbjct: 124 KVD----LEKERNVTIE-EAEEYAKQVGAVHFHTSAKQNLNVEEMF 164
>gi|298714399|emb|CBJ27456.1| RTW, Ras superfamily GTPase [Ectocarpus siliculosus]
Length = 202
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 76/169 (44%), Gaps = 13/169 (7%)
Query: 93 DTDSDLVS--LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQ-GARI 147
D D DL LK+ LLGD +GK+ V +Y+ +E R L L L K + G +
Sbjct: 14 DGDEDLEDPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNAKLDDGVEV 73
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPIL 207
WD G R P A A + +FD+T + T ++ WY E R+++++ +L
Sbjct: 74 KVDFWDTAGQERFSSMHPSYYYRAHACIMVFDVTRKATYKNLSDWYGELRQYSESIPCLL 133
Query: 208 IGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
I K D+ + + ++ +A+ FF SA NV K F
Sbjct: 134 IANKI--------DVDYQVTKKSFKFAQQHDLPFFFVSAADGTNVVKAF 174
>gi|330792269|ref|XP_003284212.1| Rab GTPase [Dictyostelium purpureum]
gi|325085909|gb|EGC39308.1| Rab GTPase [Dictyostelium purpureum]
Length = 223
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 89/170 (52%), Gaps = 10/170 (5%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI ++GD +GK++ + ++ NE E++ G++ K++ + I WD G
Sbjct: 10 FKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKIITAQCWDTAGQE 69
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPIL-IGTKFD-DFV 216
R + AV + ++D+TS+ + ++ W +E R+ ++ I I+ +G K D +
Sbjct: 70 RFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAESDILIMMVGNKSDLEMS 129
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
R P +A+A+A++ K + +SA ++ NVN+ F+ ++ +FNL
Sbjct: 130 REVP------TKEAKAFAESNKISFLETSALNSTNVNQAFETLLTDIFNL 173
>gi|66508944|ref|XP_624576.1| PREDICTED: ras-related protein Rab-43 [Apis mellifera]
Length = 219
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GDC GKT V+ G ER G++ KT+++ ++ IWD G
Sbjct: 21 FKIVLIGDCGTGKTCVVQRFRSGTFIERHGNTIGVDFSMKTILIDDKKVKLQIWDTAGQE 80
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI-PILIGTKFDDFVR 217
R + A ++ ++D+T R T S+ W E R++ + + ILIG K D
Sbjct: 81 RFRTITQSYYRSANGVIVVYDITKRSTFLSLQHWVEEVRRYTSSHVLLILIGNKCD---- 136
Query: 218 LPPDLQWTIATQARAYAKAMKATL--FFSSATHNINVNKIFKFIMAKL 263
+L+ +A A + + L +SA N N++ IF ++ ++L
Sbjct: 137 -LENLREVEKGEAEALCQYLPEVLQVVETSAKENTNIDSIFFYLASEL 183
>gi|145534648|ref|XP_001453068.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833730|emb|CAI39337.1| rab_C74 [Paramecium tetraurelia]
gi|124420768|emb|CAK85671.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 13/185 (7%)
Query: 84 LSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVK-YVGNE-QERSLQMAGLNLINKTLM 141
+SRT YD KI L+GD +GKT+ +K ++ NE Q S G+ KT
Sbjct: 1 MSRTNDEDYD-----YLFKIVLIGDSGVGKTNILKRFINNEFQLESKPTIGVEFATKTFQ 55
Query: 142 VQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-N 200
QG + IWD G R + AV +D+T T + W SE ++ +
Sbjct: 56 QQGKSVKCQIWDTAGQERFRAITNAYYRGAVGAFICYDITREITFKNTEKWLSELKEHAD 115
Query: 201 QTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIM 260
+ I+IG K D D + +A+ Y ++ K +SA N++ F I+
Sbjct: 116 GNIVIIMIGNKID-----AVDSRAVRTDEAQDYCESQKIGFIETSALDGTNIDVAFNKIV 170
Query: 261 AKLFN 265
A +FN
Sbjct: 171 ANIFN 175
>gi|73535725|pdb|1YVD|A Chain A, Gppnhp-Bound Rab22 Gtpase
Length = 169
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQ-MAGLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ +I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 T----DVREVMERDAKDYADSIHAIFVETSAKNAININELF 159
>gi|395835767|ref|XP_003790844.1| PREDICTED: ras-related protein Rab-26 [Otolemur garnettii]
Length = 256
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 10/198 (5%)
Query: 70 SSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERS-- 127
+ P PD G + +R S G +D V+ K+ L+GD +GKT + + +
Sbjct: 34 AHPGPDAPPNGPPQANRP-SLGGGSDLYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGT 92
Query: 128 -LQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTL 186
+ G++ NK L V G ++ IWD G R +DA A+L ++D+TS+ +
Sbjct: 93 FISTVGIDFRNKVLDVDGVKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTSKSSF 152
Query: 187 NSIVGWYSEARKWNQ-TAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSS 245
++I W +E +++ Q A+ +L+G K D AK +S
Sbjct: 153 DNIQAWLTEIQEYAQHNAVLMLLGNKVDSAHE-----HVVKREDGEKLAKEYGLPFMETS 207
Query: 246 ATHNINVNKIFKFIMAKL 263
A +NV+ F I +L
Sbjct: 208 AKTGLNVDLAFTAIAKEL 225
>gi|339235645|ref|XP_003379377.1| GTP-binding protein Ypt2 [Trichinella spiralis]
gi|316977954|gb|EFV60990.1| GTP-binding protein Ypt2 [Trichinella spiralis]
Length = 189
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 8/165 (4%)
Query: 102 KISLLGDCQIGKTSFVKYVGNEQ--ERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
KI L+GD IGKT V+ N ER G++ KTL+V G R+ +WD GG R
Sbjct: 14 KIVLIGDMGIGKTCVVQRFKNGTFLERQGSTIGVDFTMKTLIVDGKRVKLQVWDTGGQER 73
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQ-TAIPILIGTKFDDFVRL 218
+ A I+ +D+T R + ++ W + K+ + +L+ TK D L
Sbjct: 74 FRTITQSYYRSANGIIICYDVTCRKSFKNVRRWLDDVLKFAAPNVVKLLVATKID----L 129
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D + + A A+A + +SA N+NV++ F+ + L
Sbjct: 130 END-RLVSTEEGEALAQAEQMNFIETSAKENLNVDQAFENLAKDL 173
>gi|7661922|ref|NP_055814.1| ras-related protein Rab-21 [Homo sapiens]
gi|13633613|sp|Q9UL25.3|RAB21_HUMAN RecName: Full=Ras-related protein Rab-21; Flags: Precursor
gi|6002585|gb|AAF00048.1|AF091035_1 GTP-binding protein RAB21 [Homo sapiens]
gi|18255274|gb|AAH21901.1| RAB21, member RAS oncogene family [Homo sapiens]
gi|62203472|gb|AAH92475.1| RAB21, member RAS oncogene family [Homo sapiens]
gi|117646202|emb|CAL38568.1| hypothetical protein [synthetic construct]
gi|119617676|gb|EAW97270.1| RAB21, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119617677|gb|EAW97271.1| RAB21, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|168279117|dbj|BAG11438.1| Ras-related protein Rab-21 [synthetic construct]
Length = 225
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 19 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 78
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 79 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 135
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 136 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 173
>gi|402886848|ref|XP_003906828.1| PREDICTED: ras-related protein Rab-21 [Papio anubis]
Length = 223
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 17 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 76
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 77 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 133
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 134 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 171
>gi|355564472|gb|EHH20972.1| Ras-related protein Rab-21 [Macaca mulatta]
Length = 223
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 17 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 76
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 77 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 133
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 134 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 171
>gi|332220901|ref|XP_003259597.1| PREDICTED: ras-related protein Rab-21 [Nomascus leucogenys]
Length = 225
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 19 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 78
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 79 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 135
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 136 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 173
>gi|296212384|ref|XP_002752808.1| PREDICTED: ras-related protein Rab-21 [Callithrix jacchus]
Length = 225
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 19 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 78
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 79 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 135
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 136 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 173
>gi|114645863|ref|XP_522469.2| PREDICTED: ras-related protein Rab-21 [Pan troglodytes]
gi|397526055|ref|XP_003832955.1| PREDICTED: ras-related protein Rab-21 [Pan paniscus]
Length = 224
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 18 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 77
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 78 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 134
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 135 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 172
>gi|109097798|ref|XP_001117520.1| PREDICTED: ras-related protein Rab-21-like [Macaca mulatta]
Length = 223
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 17 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 76
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 77 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 133
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 134 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 171
>gi|403272140|ref|XP_003927941.1| PREDICTED: ras-related protein Rab-21 [Saimiri boliviensis
boliviensis]
Length = 338
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 132 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 191
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 192 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 248
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 249 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 286
>gi|115397973|ref|XP_001214578.1| GTP-binding protein ypt5 [Aspergillus terreus NIH2624]
gi|114192769|gb|EAU34469.1| GTP-binding protein ypt5 [Aspergillus terreus NIH2624]
Length = 218
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 7/188 (3%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGAR-IAFSIWDVGGD 157
K+ LLG+ +GK+S V ++V N+ + G + +T+ + + + F IWD G
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKNQFDDYRESTIGAAFLTQTISLDDSTTVKFEIWDTAGQ 77
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFDDFV 216
R P+ ++A + ++D+T +L+ W E R+ N+ + L G K D V
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKL-DLV 136
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNL-T 275
PD + A AYA+ F +SA + NV+++F I KL L RN+ T
Sbjct: 137 TENPDKRAISTADAEAYAREAGLLFFETSAKSSTNVHELFTAIAKKL-PLDQAGPRNMRT 195
Query: 276 IGEPIIDF 283
P +D
Sbjct: 196 TPRPGVDL 203
>gi|50510367|dbj|BAD32169.1| mKIAA0118 protein [Mus musculus]
Length = 253
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 48 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 107
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 108 ERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 164
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 165 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 202
>gi|299738319|ref|XP_001838277.2| Rab18 [Coprinopsis cinerea okayama7#130]
gi|298403253|gb|EAU83465.2| Rab18 [Coprinopsis cinerea okayama7#130]
Length = 223
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 87/174 (50%), Gaps = 13/174 (7%)
Query: 99 VSLKISLLGDCQIGKTSFVKYVGNEQ----ERSLQMAGLNLINKTLMVQGARIAFSIWDV 154
+++K+ L+G+ +GK+S + +EQ + S G++ + V+G ++ SIWD
Sbjct: 15 INVKLLLIGNSSVGKSSLLLRFSDEQWLPEDESSATIGVDFRVHKMEVKGKKVKLSIWDT 74
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFD 213
G R + A I+ ++D+ +R T ++ WYSE + +++ + IL+G K
Sbjct: 75 AGQERFRTITSSYYRGAQGIILVYDVANRETFEALPRWYSELETYVSESVVKILVGNK-- 132
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLP 267
++ R P + +A+ M + +SA + V ++F+ ++ ++ + P
Sbjct: 133 EYSRQVP------TAEGEKFAQKMNSLFVEASAKTAVGVKEVFQELVERILDTP 180
>gi|240849355|ref|NP_001155346.1| ras-related protein Rab-21 [Ovis aries]
gi|238566822|gb|ACR46637.1| RAB21 [Ovis aries]
Length = 222
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 16 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 75
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 76 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVD--- 132
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 133 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 170
>gi|413933483|gb|AFW68034.1| putative GTP-binding protein [Zea mays]
Length = 199
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 87/180 (48%), Gaps = 21/180 (11%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
K+ LLGD GK+S V ++V + QE ++ G ++TL V + F IWD G
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTI---GAAFFSQTLAVNDETVKFEIWDTAG 69
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFDDF 215
R P+ + A A + ++D+T+ + W E + + NQ I L G K D
Sbjct: 70 QERYHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNQNTIVALAGNKADML 129
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFI--MAKLFN-LPWTV 270
D + A +A+AYA+ + LFF +SA INVN IF I M+ + N L W V
Sbjct: 130 -----DARQVPAEEAKAYAQ--ENGLFFMETSAKTAINVNDIFYEIGEMSTILNLLVWAV 182
>gi|115496760|ref|NP_001068785.1| ras-related protein Rab-21 [Bos taurus]
gi|122144675|sp|Q17R06.1|RAB21_BOVIN RecName: Full=Ras-related protein Rab-21; Flags: Precursor
gi|109658186|gb|AAI18089.1| RAB21, member RAS oncogene family [Bos taurus]
Length = 222
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 16 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 75
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 76 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVD--- 132
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 133 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 170
>gi|242808404|ref|XP_002485155.1| RAB GTPase Ypt5, putative [Talaromyces stipitatus ATCC 10500]
gi|218715780|gb|EED15202.1| RAB GTPase Ypt5, putative [Talaromyces stipitatus ATCC 10500]
Length = 218
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 84/191 (43%), Gaps = 7/191 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQE--RSLQMAGLNLINKTLMVQGARIAFSIWDV 154
K+ LLG+ +GK+S V ++V ++ + R + L + + + F IWD
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDT 74
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFD 213
G R P+ ++A + ++D+T +L+ W E R+ N+ I L G K
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKSWVKELQRQANENIIIALAGNKL- 133
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRN 273
D V PD + A AYAK F +SA NV ++F I KL L RN
Sbjct: 134 DLVTENPDKRAIATADAEAYAKEAGLLFFETSAKTTTNVKELFTAIAKKL-PLDQAGPRN 192
Query: 274 L-TIGEPIIDF 283
L T P +D
Sbjct: 193 LRTNTRPGVDL 203
>gi|167538835|ref|XP_001751068.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770407|gb|EDQ84120.1| predicted protein [Monosiga brevicollis MX1]
Length = 188
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 10/164 (6%)
Query: 100 SLKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
+K+ LGD +GK+ V+ + + + L L L V+G + WD G
Sbjct: 7 GVKVICLGDSAVGKSKLVERFLMDDYKPHQLSTFALTLFRHNAKVEGKDVVVDFWDTAGQ 66
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVR 217
R P +A + + +FD+T + T +++ WY E R++ + IP+++ V
Sbjct: 67 ERFASVHPSYYHEAHSCILVFDVTRKVTYKNLLTWYKELREY-RPKIPVIV-------VA 118
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMA 261
D+ +++ +A + K +F+SA+ NV KIF +A
Sbjct: 119 NKIDVDYSVTNKAFGFPKKHNLPFYFASASDGTNVVKIFNEAIA 162
>gi|33859751|ref|NP_077774.1| ras-related protein Rab-21 [Mus musculus]
gi|46577689|sp|P35282.4|RAB21_MOUSE RecName: Full=Ras-related protein Rab-21; AltName: Full=Rab-12;
Flags: Precursor
gi|32822759|gb|AAH55042.1| RAB21, member RAS oncogene family [Mus musculus]
gi|112292999|dbj|BAF02877.1| Rab21 [Mus musculus]
gi|148689817|gb|EDL21764.1| RAB21, member RAS oncogene family [Mus musculus]
Length = 222
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 17 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 76
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 77 ERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 133
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 134 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 171
>gi|403413519|emb|CCM00219.1| predicted protein [Fibroporia radiculosa]
Length = 224
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 90/175 (51%), Gaps = 12/175 (6%)
Query: 99 VSLKISLLGDCQIGKTSFVKYVGNEQ----ERSLQMAGLNLINKTLMVQGARIAFSIWDV 154
V++K+ L+G+ +GK+S + +EQ + + G++ + V+G ++ SIWD
Sbjct: 11 VNVKLLLIGNSSVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMEVKGKKVKLSIWDT 70
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFD 213
G R + A I+ ++D+ +R + +++ WYSE + + + + I++G K D
Sbjct: 71 AGQERFRTITSSYYRGAQGIILVYDVANRESFDALPRWYSELETYVSPSVVKIIVGNKVD 130
Query: 214 -DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLP 267
+F R ++ + +A+ M + F +SA +I V + F+ ++ K+ + P
Sbjct: 131 KEFSRQ------VSHSEGQHFAERMNSLFFEASAKTSIGVREAFQEVVEKILDTP 179
>gi|348521238|ref|XP_003448133.1| PREDICTED: ras-related protein Rab-21-like [Oreochromis niloticus]
Length = 216
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 11 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNITGKRVNLAIWDTAGQ 70
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 71 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 127
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKR 272
L D ++ +A +YA+++ A + +SA N + ++F + ++ +R
Sbjct: 128 -LDKDRHVSV-EEAESYAESVGAKHYHTSAKLNKGIEELFLDLCKRMMETAQAEER 181
>gi|225708794|gb|ACO10243.1| Ras-related protein Rab-39B [Caligus rogercresseyi]
Length = 250
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 15/196 (7%)
Query: 75 DTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVKYV--GNEQERSLQMAG 132
D +E ++ + TF ++ L+GD +GK+S ++Y G+ E S G
Sbjct: 3 DPLEKSMIPIDPTFR---------YQFRLILIGDSTVGKSSLLRYFTDGSFGEVSDPTVG 53
Query: 133 LNLINKTLMVQGARI-AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVG 191
++ K L V+ I +WD G R ++ VA L ++D+ +R + +
Sbjct: 54 IDFFAKLLPVKDGNIMKLLLWDTAGQERFRSITRSYYRNTVAALIIYDICNRDSFTHVPN 113
Query: 192 WYSEARKWNQT--AIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHN 249
W +EARK + ++ IL+G K D P + +AR +A+ +SA
Sbjct: 114 WMAEARKHMEPNKSVFILVGCKL-DISETNPGSREVPTEEARTFAELHGLQFLETSAKSG 172
Query: 250 INVNKIFKFIMAKLFN 265
INV+ +F+ + ++++
Sbjct: 173 INVDNVFRLLSQEIYD 188
>gi|148230174|ref|NP_001083402.1| RAB21, member RAS oncogene family [Xenopus laevis]
gi|38014530|gb|AAH60498.1| MGC68816 protein [Xenopus laevis]
Length = 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 96 SDLVSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
S S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD
Sbjct: 13 SKTYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWD 72
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKF 212
G R PI +D+ + ++D+T + + W E RK I + ++G K
Sbjct: 73 TAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKV 132
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
D L + +I +A YA+++ A + +SA N + ++F
Sbjct: 133 D----LEKERHVSI-QEAEEYAESVGAKHYHTSAKQNKGIEELF 171
>gi|302781680|ref|XP_002972614.1| rab family GTPase [Selaginella moellendorffii]
gi|300160081|gb|EFJ26700.1| rab family GTPase [Selaginella moellendorffii]
Length = 205
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 101/192 (52%), Gaps = 17/192 (8%)
Query: 80 GLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLIN 137
GL LS D+ + +K+ LLGD +GK+ V ++V + + S ++ G + ++
Sbjct: 11 GLPHLSDGSLENGSQDTKHLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSSKVTVGASFLS 70
Query: 138 KTLMVQ-GARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEA 196
+T+ +Q + + F IWD G R P+ + A A + ++DLTS+ + W E
Sbjct: 71 QTIALQDSSTVKFEIWDTAGQERYASLAPLYYRGASAAVVVYDLTSKESFQKAQYWVKEL 130
Query: 197 RKWNQTAIPI-LIGTKFD-DFVRLPPDLQWTIAT-QARAYAKAMKATLFFSSATHNI--N 251
+K I + L+G K D D +R T++T +ARAYA++ ++FF+ A+ N
Sbjct: 131 QKHANAGIVLALVGNKADLDNLR-------TVSTDEARAYAESN--SMFFTEASAKTAGN 181
Query: 252 VNKIFKFIMAKL 263
+N++F+ I +L
Sbjct: 182 INELFEEIAKRL 193
>gi|167389097|ref|XP_001738817.1| GTP-binding protein ryH1 [Entamoeba dispar SAW760]
gi|165897808|gb|EDR24880.1| GTP-binding protein ryH1, putative [Entamoeba dispar SAW760]
Length = 196
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 13/182 (7%)
Query: 98 LVSLKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVG 155
L+ KI LGD +GKT + G+ G + KT+ Q I IWD
Sbjct: 4 LMKQKIVFLGDSSVGKTCIIGRFMTGDFSTGYEATIGTDFSTKTMTFQNKSIQLQIWDTA 63
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDD 214
G R +P +D+ A + ++D+ R + ++ W + R + I + L+G K
Sbjct: 64 GQERYRSLIPSYIRDSSAAVIVYDINDRQSFENVDKWIEDVRSKEKGEIFLFLVGNKL-- 121
Query: 215 FVRLPPDLQWTIATQARAYAKAM--KATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKR 272
DL TQ A AK + T F +SA NIN+ ++F I KL L V+
Sbjct: 122 ------DLGHREVTQKEALAKGQNYQCTCFETSAKTNINITELFNAITEKLSTLEPPVED 175
Query: 273 NL 274
++
Sbjct: 176 HI 177
>gi|312082931|ref|XP_003143650.1| hypothetical protein LOAG_08070 [Loa loa]
gi|307761187|gb|EFO20421.1| hypothetical protein LOAG_08070 [Loa loa]
Length = 219
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 8/173 (4%)
Query: 94 TDSDLVSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSI 151
T++ L++ KI LLG+ +GKTS ++Y+ N + + + + K L V G + +I
Sbjct: 10 TNNLLLNFKIVLLGEGAVGKTSLMLRYIENRFNPQHVSTLQASFLCKKLHVDGQTVELNI 69
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGT 210
WD G + PI +D+ L ++D+T + + W E R ++IG
Sbjct: 70 WDTAGQEKFHALGPIYYRDSHGALLIYDITDTHSFEKVKMWVKELKRMLGDDVYLMIIGN 129
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
K D D+ +A YAK + A F +SA NI V ++F +++ L
Sbjct: 130 KLDLERNRNVDIN-----EAIGYAKLIGAKHFETSAKDNIGVTQVFDYLVKGL 177
>gi|183231256|ref|XP_655064.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169802558|gb|EAL49676.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
Length = 196
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 79/182 (43%), Gaps = 13/182 (7%)
Query: 98 LVSLKISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMVQGARIAFSIWDVG 155
L+ KI LGD +GKT + N + A G + KT+ Q I IWD
Sbjct: 4 LMKQKIVFLGDSSVGKTCIIGRFMNGDFNTGYEATIGTDFSTKTMTFQNKSIQLQIWDTA 63
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDD 214
G R +P +D+ A + ++D+ R + S+ W + R + I + L+G K
Sbjct: 64 GQERYRSLIPSYIRDSSAAVIVYDINDRQSFESVDKWIEDVRSKEKGEIFLFLVGNKL-- 121
Query: 215 FVRLPPDLQWTIATQARAYAKAM--KATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKR 272
DL TQ A AK + F +SA NIN+ ++F I KL L V+
Sbjct: 122 ------DLGHREVTQKEALAKGQNYQCMCFETSAKTNINITELFNAITEKLSTLEPPVEE 175
Query: 273 NL 274
++
Sbjct: 176 HI 177
>gi|417397373|gb|JAA45720.1| Putative gtpase [Desmodus rotundus]
Length = 221
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 15 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 74
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 75 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 131
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A YA+++ A + +SA N + ++F
Sbjct: 132 -LEKERHVSI-QEAELYAESVGAKHYHTSAKQNKGIEELF 169
>gi|156366329|ref|XP_001627091.1| predicted protein [Nematostella vectensis]
gi|156213990|gb|EDO34991.1| predicted protein [Nematostella vectensis]
Length = 216
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 8/159 (5%)
Query: 101 LKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ LLG+ +GKTS ++YV ++ ++ L + +NK L + G R+ +IWD G
Sbjct: 10 FKVVLLGEGCVGKTSLMLRYVQDKFNDKHLTTLQASFLNKRLNINGQRVNLAIWDTAGQE 69
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDFVR 217
R PI +D+ + ++D+T + + W E +K I + I G K D
Sbjct: 70 RFHALGPIYYRDSNGAILVYDITDEDSFLKVKNWVRELKKMLGDDICLCIAGNKID---- 125
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L D + A+ A AYAK + A F +SA N + ++F
Sbjct: 126 LEKD-RHVEASDAEAYAKTVGAKHFHTSAKLNKGIEEMF 163
>gi|390360094|ref|XP_003729629.1| PREDICTED: ras-related protein Rab-21-like [Strongylocentrotus
purpuratus]
Length = 207
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
+ K+ LLG+ +GKTS V +YV N+ ++ + + +NK L + G R+ IWD G
Sbjct: 10 NFKVVLLGEGCVGKTSLVLRYVENKFNDKHITTLQASFLNKKLNIGGKRVNLDIWDTAGQ 69
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDFV 216
R PI +D+ + ++D+T + + W E +K I + I G K D
Sbjct: 70 ERFHALGPIYYRDSNGAILVYDITDEDSFTKVKSWVKELKKMLGNDISLCIAGNKID--- 126
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L ++A A AYA ++ A F +SA N + ++F
Sbjct: 127 -LEKQRNVSVA-DAEAYAASVGAKHFHTSAKLNKGIEEMF 164
>gi|452847264|gb|EME49196.1| hypothetical protein DOTSEDRAFT_68068 [Dothistroma septosporum
NZE10]
Length = 224
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 5/183 (2%)
Query: 85 SRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNE--QERSLQMAGLNLINKTLM 141
+R G + K+ LLG+ +GK+S V ++V ++ R + L +
Sbjct: 3 ARMQQGGRPGGARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIAL 62
Query: 142 VQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWN 200
+ + F IWD G R P+ ++A + ++D+T +L+ W E R+ N
Sbjct: 63 DEQTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVKELQRQAN 122
Query: 201 QTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIM 260
+ I L G K D V PD + T A AYAK F +SA NV ++F I
Sbjct: 123 ENIIIALAGNKA-DLVAEQPDKRAVPTTDAEAYAKEANLLFFETSAKTAENVKELFTAIA 181
Query: 261 AKL 263
KL
Sbjct: 182 KKL 184
>gi|383854352|ref|XP_003702685.1| PREDICTED: 28S ribosomal protein S5, mitochondrial-like [Megachile
rotundata]
Length = 630
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GDC GKT V+ G ER G++ KT+++ +I IWD G
Sbjct: 432 FKIVLIGDCGTGKTCVVQRFRSGTFIERHGNTIGVDFSMKTVLIDDKKIKLQIWDTAGQE 491
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI-PILIGTKFDDFVR 217
R + A ++ ++D+T R T S+ W E R++ + + +L+G K D
Sbjct: 492 RFRTITQSYYRSANGVIVVYDITKRSTFLSLQHWVEEVRRYTSSHVLLVLVGNKCD---- 547
Query: 218 LPPDLQWTIATQARAYAKAMKATL--FFSSATHNINVNKIFKFIMAKL 263
DL+ +A A + + L +SA N N++ IF ++ ++L
Sbjct: 548 -LEDLREVEKEEAEALCQYLPEVLQVVETSAKENTNIDSIFFYLASEL 594
>gi|358335778|dbj|GAA38156.2| Ras-related protein Rab-18A, partial [Clonorchis sinensis]
Length = 168
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 4/124 (3%)
Query: 94 TDSDLVSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSI 151
TD++ V +K+ +LGD +GK+S + ++V + Q G + TLM+ G I F+I
Sbjct: 2 TDTEAVPIKLIVLGDSGVGKSSLIRRFVEDHFQPEEPATIGFDFKPFTLMIDGELIQFNI 61
Query: 152 WDVGGDSRSFDHV-PIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI-PILIG 209
WD G R ++ P + A +++D+TS+ +LNS+ W + ++ T++ +LIG
Sbjct: 62 WDTAGAERYSGYLTPSFYRGANGAFYVYDITSKKSLNSVHYWIEQTEQFTHTSVMKMLIG 121
Query: 210 TKFD 213
K D
Sbjct: 122 NKVD 125
>gi|321475351|gb|EFX86314.1| hypothetical protein DAPPUDRAFT_187550 [Daphnia pulex]
Length = 216
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI ++GDC IGKTS V+ G ER G++ KT++++G ++ IWD G
Sbjct: 18 FKIVVIGDCGIGKTSLVQRFKSGVFTERYTNTIGVDFAMKTIVIEGKQVKLQIWDTAGQE 77
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFD-DFV 216
R + A +L ++D+T R + S+ W E R++ I +LIG K D D +
Sbjct: 78 RFRTITQSYYRSANGVLLVYDITKRSSFLSLQKWMEEIRRFTANNISWVLIGNKCDMDTL 137
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
R + +A A A+ + + +SA N NV + F + +L
Sbjct: 138 REVEQV------EALAMAELIPEIVLVLETSAKDNTNVEQAFVELATEL 180
>gi|67480359|ref|XP_655529.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56472674|gb|EAL50140.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790136|dbj|BAD82864.1| small GTPase EhRabX16 [Entamoeba histolytica]
gi|449710575|gb|EMD49626.1| small GTPase EhRabX16, putative [Entamoeba histolytica KU27]
Length = 203
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 10/174 (5%)
Query: 96 SDLVSLKISLLGDCQIGKTSFVK-YVGNEQERSLQ-MAGLNLINKTLMVQGARIAFSIWD 153
+D + KI ++GD +GKTS VK YV E + L+ G+++ NKT+ + I + +D
Sbjct: 5 NDSIVFKIIVIGDANVGKTSLVKRYVDREFYKELKPTIGVDIKNKTININEENICLTFFD 64
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPIL-IGTKF 212
G + K A A + ++D+T T NS+ WY++ R IP+L IG K
Sbjct: 65 TAGQEKFAAVTDSYFKGAKACIIVYDITKAVTFNSVDKWYNKLRNIVSDPIPVLIIGNKS 124
Query: 213 DDFVRLPPDLQWTIATQARA-YAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
D + Q I T A A+ + A +S + NV+K K I ++ N
Sbjct: 125 D------IEQQRDITTDVGASLARKLGAFFIETSCLNGSNVDKAIKIISNEIIN 172
>gi|440905226|gb|ELR55633.1| Ras-related protein Rab-21, partial [Bos grunniens mutus]
Length = 214
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 8 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 67
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 68 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVD--- 124
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 125 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 162
>gi|225718090|gb|ACO14891.1| Ras-related protein Rab-39B [Caligus clemensi]
Length = 255
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 15/196 (7%)
Query: 75 DTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVKYV--GNEQERSLQMAG 132
D +E + + TF ++ L+GD +GK+S ++Y G+ E S G
Sbjct: 4 DPLEKSTIPIDPTFD---------YQFRLILIGDSTVGKSSLLRYFTDGSFGEVSDPTVG 54
Query: 133 LNLINKTLMVQGARI-AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVG 191
++ K L V+ R+ +WD G R ++ VA L ++D+ +R + +
Sbjct: 55 IDFFAKLLPVKDGRVMKLLLWDTAGQERFRSITRSYYRNTVAALLIYDICNRESFTHVPT 114
Query: 192 WYSEARKWNQT--AIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHN 249
W +EA+K + + IL+G K+ D P ++ +AR +A+ +SA
Sbjct: 115 WMAEAKKHMEPHKCVFILVGCKY-DIAESGPGIREVPTEEARTFAELHGLQFLETSAKTG 173
Query: 250 INVNKIFKFIMAKLFN 265
NV+K+F+ + ++++
Sbjct: 174 QNVDKVFRMLSQEIYD 189
>gi|291234199|ref|XP_002737035.1| PREDICTED: RAB21, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 216
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
+ K+ LLG+ +GKTS V +YV N+ E+ + + + K L + G R+ +IWD G
Sbjct: 13 NFKVVLLGEGAVGKTSVVLRYVENKFNEKHISTLQASFLTKKLNIGGKRVNLAIWDTAGQ 72
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + I G K D
Sbjct: 73 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNDIALCIAGNKID--- 129
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +A A +YA ++ A F ++A N + ++F
Sbjct: 130 -LEKERHVPVA-DAESYAASVGAKHFHTTAKLNKGIEEMF 167
>gi|307190847|gb|EFN74693.1| Ras-related protein Rab-21 [Camponotus floridanus]
Length = 224
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
+ K+ LLG+ +GKTS ++YV ++ ++ + + +NK L + G R+ +IWD G
Sbjct: 12 NFKVVLLGEGCVGKTSVALRYVEDKFNDKHITTLQASFLNKKLNINGKRVNLAIWDTAGQ 71
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDFV 216
+ PI + + + ++D+T T + W E +K + I ++I G K D
Sbjct: 72 EKFHALGPIYYRMSNGAILVYDITDEDTFQKVKNWVKELKKMLGSEICLVIAGNKVD--- 128
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L D I +A YAK + A F +SA N N+ ++F
Sbjct: 129 -LEKDRNVAI-DEAEEYAKQVGAMHFHTSAKLNQNIEEMF 166
>gi|327278061|ref|XP_003223781.1| PREDICTED: ras-related protein Rab-22A-like [Anolis carolinensis]
Length = 194
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 ----NDVREVMEKDAKDYADSIHAVFVETSAKNAININELF 159
>gi|183232546|ref|XP_655103.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169801978|gb|EAL49717.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449709304|gb|EMD48591.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 196
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 78/182 (42%), Gaps = 13/182 (7%)
Query: 98 LVSLKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVG 155
L+ KI LGD +GKT + G+ G + KT+ Q I IWD
Sbjct: 4 LMKQKIVFLGDSSVGKTCIIGRFMTGDFNTGYEATIGTDFSTKTMTFQNKSIQLQIWDTA 63
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDD 214
G R +P +D+ A + ++D+ R + S+ W + R + I + L+G K
Sbjct: 64 GQERYRSLIPSYIRDSSAAVIVYDINDRQSFESVDKWIEDVRSKEKGEIFLFLVGNKL-- 121
Query: 215 FVRLPPDLQWTIATQARAYAKAM--KATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKR 272
DL TQ A AK + F +SA NIN+ ++F I KL L V+
Sbjct: 122 ------DLGHREVTQKEALAKGQNYQCMCFETSAKTNINITELFNAITEKLSTLEPPVEE 175
Query: 273 NL 274
++
Sbjct: 176 HI 177
>gi|154420093|ref|XP_001583062.1| Ras family protein [Trichomonas vaginalis G3]
gi|121917301|gb|EAY22076.1| Ras family protein [Trichomonas vaginalis G3]
Length = 200
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 11/181 (6%)
Query: 87 TFSSGYDTDSDL-VSLKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQ 143
TF +D ++ + K+ L+GD +GKTS + Y + + + +
Sbjct: 2 TFEDPFDIENSADMEFKVVLVGDGYVGKTSIINRFYSDHFSTNEPPTIAASFLPIAMNKN 61
Query: 144 GARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEA-RKWNQT 202
G R+ +IWD G + VP+ + A ++ +FDLT+ T + WY++ Q
Sbjct: 62 GKRVVLNIWDTAGHEKFHCLVPLYARAANTLIVVFDLTNEMTFENAKEWYTKTILDVGQI 121
Query: 203 AIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAK 262
+ IL G K D L PD T+ +AKA +SA + NV ++FK I K
Sbjct: 122 PVCILCGNKLD----LMPDAN---TTKYEDWAKAHNCLFITTSAANGTNVQEMFKTITEK 174
Query: 263 L 263
L
Sbjct: 175 L 175
>gi|403273311|ref|XP_003928462.1| PREDICTED: ras-related protein Rab-26 [Saimiri boliviensis
boliviensis]
Length = 256
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 14/171 (8%)
Query: 47 LVCSIGKQPAVRYQKLTRRSSSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLL 106
L + G QPA S + P PD G + R S G D D V+ K+ L+
Sbjct: 20 LPAANGPQPA---------RSGTARPGPDAPPNGPPQPGRP-SLGSDGDFYDVAFKVMLV 69
Query: 107 GDCQIGKTSF-VKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDH 163
GD +GKT V++ + G++ NK L V G ++ +WD G R
Sbjct: 70 GDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSV 129
Query: 164 VPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
+DA A+L ++D+T++ + ++I W +E ++ Q + + L+G K D
Sbjct: 130 THAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVD 180
>gi|168061333|ref|XP_001782644.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162665877|gb|EDQ52547.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 211
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 9/182 (4%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMAGLNLINKTLMVQGARIA 148
+G D D++ LKI ++G+ +GK+S + ++ + + G++ K + +QG R+
Sbjct: 2 AGPGDDFDIL-LKIPVVGNSGVGKSSLLLRFAAGKFDELWPTIGVDFKVKMMNLQGKRLK 60
Query: 149 FSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVG-WYSEARKW--NQTAIP 205
+IWD G R + A I+ ++D+T R T + W E ++ N+ I
Sbjct: 61 LTIWDTAGQERFRTLTSTYYRGAQGIILVYDVTRRATFTDLTNVWLKEVERFSTNKDCIK 120
Query: 206 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
+LIG K D L + +A A+AK +SA +INV + F ++ K+ +
Sbjct: 121 MLIGNKVD----LEESERMVTKKEAIAFAKQHGCLFLEASAKTSINVQRCFNELVLKILD 176
Query: 266 LP 267
P
Sbjct: 177 TP 178
>gi|118082329|ref|XP_001233648.1| PREDICTED: ras-related protein Rab-21 [Gallus gallus]
Length = 220
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 15 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 74
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 75 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 131
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + ++ +A YA+++ A + +SA N + ++F
Sbjct: 132 -LEKERHVSV-QEAETYAESVGAKHYHTSAKQNKGIEELF 169
>gi|336463884|gb|EGO52124.1| hypothetical protein NEUTE1DRAFT_132863 [Neurospora tetrasperma
FGSC 2508]
Length = 1001
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
Query: 102 KISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMV-QGARIAFSIWDVGGDS 158
K+ LLG+ +GK+S V +Q S + + G + +T+ + + + F IWD G
Sbjct: 21 KLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTIALDENTTVKFEIWDTAGQE 80
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFDDFVR 217
R P+ ++A + ++D+T +L+ W E R+ N+ I L G K D V+
Sbjct: 81 RYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKL-DLVQ 139
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
PD + A+AYAK F +SA NV +F I KL
Sbjct: 140 EQPDKRAIQTADAQAYAKEAGLLFFETSAKTAENVQNLFTEIAKKL 185
>gi|301095181|ref|XP_002896692.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108831|gb|EEY66883.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
Length = 365
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 5/169 (2%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
LK+ L+GD +GK++ V ++ N+ S+Q G KT+ V R+ IWD G
Sbjct: 97 LKVVLIGDSGVGKSNLVMRFTKNKYMPHSVQTVGFEFATKTIRVGDRRLRAQIWDTAGQE 156
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFDDFVR 217
R ++AV + ++D+T+R + + GW ++ + +++ + IL+G K D
Sbjct: 157 RFQSLTAAYYRNAVGAMIVYDITNRSSFEHVTGWLAQVHEHSHESLVLILVGNKC-DLAH 215
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
LP Q + AR +A +SA NV FK ++ + L
Sbjct: 216 LPESRQVSTLEAAR-FAAKHSMEFLETSALDATNVVDAFKKLIVPVGRL 263
>gi|322778765|gb|EFZ09181.1| hypothetical protein SINV_03538 [Solenopsis invicta]
Length = 228
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
+ K+ LLG+ +GKTS ++YV ++ ++ + + +NK L + G R+ +IWD G
Sbjct: 11 NFKVVLLGEGCVGKTSVALRYVEDKFNDKHITTLQASFLNKKLNINGKRVNLAIWDTAGQ 70
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDFV 216
+ PI + + + ++D+T T + W E +K + I ++I G K D
Sbjct: 71 EKFHALGPIYYRMSNGAILVYDITDEDTFQKVKNWVKELKKMLGSEICLVIAGNKVD--- 127
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L D I +A YAK + A F +SA N N+ ++F
Sbjct: 128 -LEKDRNVAIE-EAEEYAKQVGAMHFHTSAKLNQNIEEMF 165
>gi|56967666|gb|AAW31982.1| CG2532 [Drosophila melanogaster]
gi|56967678|gb|AAW31988.1| CG2532 [Drosophila melanogaster]
Length = 174
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 8/168 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQ--ERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI +LGD +GK+ + + + E+ + G++ + + + G + IWD GD
Sbjct: 8 FKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDE 67
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVR 217
R +P + A IL ++D+TS + +I GW E R+ + + + L+G K DD
Sbjct: 68 RFKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSENVNVMLVGNKCDDL-- 125
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
D + Q YA + SA NVN +F + ++N
Sbjct: 126 ---DNRQVRMEQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYN 170
>gi|340714578|ref|XP_003395804.1| PREDICTED: ras-related protein Rab-43-like [Bombus terrestris]
gi|350411163|ref|XP_003489259.1| PREDICTED: ras-related protein Rab-43-like [Bombus impatiens]
Length = 219
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 10/168 (5%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GDC GKT V+ G ER G++ KT+++ ++ IWD G
Sbjct: 21 FKIVLIGDCGTGKTCVVQRFRSGTFIERHGNTIGVDFSMKTVLIDDKKVKLQIWDTAGQE 80
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI-PILIGTKFDDFVR 217
R + A ++ ++D+T R T S+ W E R++ + + IL+G K D
Sbjct: 81 RFRTITQSYYRSANGVIVVYDITKRSTFLSLQHWVEEVRRYTSSHVLLILVGNKCD---- 136
Query: 218 LPPDLQWTIATQARAYAKAMKATL--FFSSATHNINVNKIFKFIMAKL 263
L+ +A A + + L +SA N N++ +F ++ A+L
Sbjct: 137 -LESLREVEKGEAEALCQYLPEVLQVVETSAKENTNIDSVFFYLAAEL 183
>gi|327272884|ref|XP_003221214.1| PREDICTED: ras-related protein Rab-21-like [Anolis carolinensis]
Length = 235
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 30 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 89
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 90 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 146
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A YA+++ A + +SA N + ++F
Sbjct: 147 -LDKERHVSI-QEAETYAESVGARHYHTSAKQNKGIEELF 184
>gi|195481939|ref|XP_002101841.1| GE17848 [Drosophila yakuba]
gi|194189365|gb|EDX02949.1| GE17848 [Drosophila yakuba]
Length = 219
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 8/168 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQ--ERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI +LGDC +GK+ + +++ + L G++ +++ V G + +WD G+
Sbjct: 8 FKILVLGDCGVGKSCLLMRFSDDRFTGKYLCTVGVDFKVRSVEVAGQVVKLQVWDTAGEE 67
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFDDFVR 217
R +P + A IL ++D TS T SI GW E R+ +L+G K DD
Sbjct: 68 RFKSLLPAYYRGAHGILLVYDTTSANTFRSIDGWLEEIHRRCPDRVNVLLVGNKCDDLEH 127
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
L+ QA YA SA NVN F + +FN
Sbjct: 128 RQVSLE-----QALHYADRRALGFCEVSAKSGANVNYAFAALAVDIFN 170
>gi|18414255|ref|NP_568121.1| RAB GTPase-C2A [Arabidopsis thaliana]
gi|297810433|ref|XP_002873100.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|75098916|sp|O49841.1|RAC2A_ARATH RecName: Full=Ras-related protein RABC2a; Short=AtRABC2a; AltName:
Full=Ras-related protein Rab18B; Short=AtRab18B
gi|2723477|dbj|BAA24074.1| GTP-binding protein [Arabidopsis thaliana]
gi|7378638|emb|CAB83314.1| AtRab GTP-binding protein [Arabidopsis thaliana]
gi|26453054|dbj|BAC43603.1| putative AtRab GTP-binding protein [Arabidopsis thaliana]
gi|29824251|gb|AAP04086.1| unknown protein [Arabidopsis thaliana]
gi|297318937|gb|EFH49359.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332003236|gb|AED90619.1| RAB GTPase-C2A [Arabidopsis thaliana]
Length = 210
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 90/206 (43%), Gaps = 21/206 (10%)
Query: 85 SRTFSSGYDTDSDLVSLKISLLGDCQIGKTS-FVKYVGNEQERSLQMAGLNLINKTLMVQ 143
S + SGYD +S KI L+GD +GK+S V ++ + E G++ K L V
Sbjct: 3 SSSGQSGYD-----LSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVG 57
Query: 144 GARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVG-WYSEARKW--N 200
G R+ +IWD G R + A I+ ++D+T R T ++V W E + N
Sbjct: 58 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTN 117
Query: 201 QTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIM 260
Q + +L+G K D + I A AK + SA NV + F+ +
Sbjct: 118 QECVRMLVGNKVDRESERGVSREEGI-----ALAKELNCMFLECSARTRQNVEQCFEELA 172
Query: 261 AKLFNLP-------WTVKRNLTIGEP 279
K+ +P VKRN+ +P
Sbjct: 173 LKIMEVPSLLEEGSSAVKRNILKQKP 198
>gi|70994486|ref|XP_752022.1| RAB GTPase Ypt5 [Aspergillus fumigatus Af293]
gi|119500926|ref|XP_001267220.1| RAB GTPase Ypt5, putative [Neosartorya fischeri NRRL 181]
gi|66849656|gb|EAL89984.1| RAB GTPase Ypt5, putative [Aspergillus fumigatus Af293]
gi|119415385|gb|EAW25323.1| RAB GTPase Ypt5, putative [Neosartorya fischeri NRRL 181]
gi|159125065|gb|EDP50182.1| RAB GTPase Ypt5, putative [Aspergillus fumigatus A1163]
Length = 218
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 7/199 (3%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQE--RSLQMAGLNLINKTLMVQGAR 146
+G + K+ LLG+ +GK+S V ++V ++ + R + L + +
Sbjct: 7 AGTRPGARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTT 66
Query: 147 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIP 205
+ F IWD G R P+ ++A + ++D+T +L+ W E R+ N+ +
Sbjct: 67 VKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVI 126
Query: 206 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
L G K D V PD + A AYA+ F +SA + NV ++F I KL
Sbjct: 127 ALAGNKL-DLVTEHPDKRAIPTADAEAYAREAGLLFFETSAKTSTNVKELFAAIAKKL-P 184
Query: 266 LPWTVKRNL-TIGEPIIDF 283
L RNL T P +D
Sbjct: 185 LDQAGPRNLRTTPRPGVDL 203
>gi|325183560|emb|CCA18021.1| RTW putative [Albugo laibachii Nc14]
Length = 196
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 12/168 (7%)
Query: 94 TDSDLVSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGAR--IAF 149
TD +KI LLGD +GK+ V +Y+ +E Q R L L L K ++++G I
Sbjct: 8 TDEIPADVKIILLGDSAVGKSKLVERYMMDEFQPRQLSTYALTLYRKDVVMEGCDKPIKV 67
Query: 150 SIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIG 209
WD G R P + A + +FD+T + T ++ WY E R++ + L+
Sbjct: 68 DFWDTAGQERFSSMHPSYYFGSHACILVFDVTRKVTYQNLANWYQELREYCEHIPCFLVA 127
Query: 210 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 257
K D+ + T++ +A+ + F SA NV K+F+
Sbjct: 128 NKV--------DVDMNVTTKSFKFAENHQLEFEFVSAADGTNVVKVFE 167
>gi|149642869|ref|NP_001092635.1| ras-related protein Rab-22A [Bos taurus]
gi|148744911|gb|AAI42191.1| RAB22A protein [Bos taurus]
Length = 194
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ D++ + A+ YA ++ A +SA + IN+N++
Sbjct: 123 I----DVREVMERDAKDYADSIHAVFVETSAKNAININELL 159
>gi|85014405|ref|XP_955698.1| GTP-binding protein [Encephalitozoon cuniculi GB-M1]
gi|19171392|emb|CAD27117.1| RAS-RELATED PROTEIN GTP-BINDING PROTEIN [Encephalitozoon cuniculi
GB-M1]
gi|449330264|gb|AGE96524.1| ras-related protein GTP-binding protein [Encephalitozoon cuniculi]
Length = 203
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 5/158 (3%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDSR 159
KI +LG+ +GKT + KY ++ ++SL G++ ++K++++ G I +IWD G R
Sbjct: 11 KIIVLGESDVGKTCLLHKYKEDDFKQSLMTTIGVDTVSKSIVLNGKNIMLNIWDTAGQER 70
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLP 219
F ++A IL +FD++ T + + W+ R+ L+G K D ++
Sbjct: 71 FFSITKSYYRNADGILLIFDISDERTFSCVDRWFGRIREETGNVPLFLVGNKRD---KVD 127
Query: 220 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 257
+ + + + A M+A + +SA NVN IF+
Sbjct: 128 SAMYHEMEGRFKNKADEMRARYYTTSAKTGENVNNIFE 165
>gi|348680772|gb|EGZ20588.1| hypothetical protein PHYSODRAFT_465114 [Phytophthora sojae]
Length = 360
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 5/169 (2%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
LK+ L+GD +GK++ V ++ N+ S+Q G KT+ V R+ IWD G
Sbjct: 100 LKVVLIGDSGVGKSNLVMRFTKNKYMPHSVQTVGFEFATKTIRVGDRRLKAQIWDTAGQE 159
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFDDFVR 217
R ++AV + ++D+T+R + + GW ++ + +++ + IL+G K D
Sbjct: 160 RFQSLTAAYYRNAVGAMIVYDITNRSSFEHVTGWLAQVHEHSHESLVLILVGNKC-DLAH 218
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
LP + + AR +A +SA + NV FK ++ + L
Sbjct: 219 LPESREVSTLEAAR-FAAKHSMEFLETSALDSTNVVDAFKKLIVPVGRL 266
>gi|126339429|ref|XP_001370428.1| PREDICTED: ras-related protein Rab-21-like [Monodelphis domestica]
Length = 227
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 22 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 81
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 82 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 138
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + ++ +A YA+++ A + +SA N + ++F
Sbjct: 139 -LEKERHVSV-QEAETYAESVGAKHYHTSAKQNKGIEELF 176
>gi|449274250|gb|EMC83533.1| Ras-related protein Rab-22A [Columba livia]
Length = 194
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 ----NDVREVMEKDAKDYADSIHAIFVETSAKNAININELF 159
>gi|326437703|gb|EGD83273.1| small GTP binding protein RAB6A [Salpingoeca sp. ATCC 50818]
Length = 207
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 90/188 (47%), Gaps = 8/188 (4%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARI 147
S D +S L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++ +
Sbjct: 2 SQQDINSSLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTV 61
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPI 206
+WD G R +P +D+ + ++D+T+R + W + R + Q I +
Sbjct: 62 RLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRSSFQQTSRWIDDVRAERGQDVIIM 121
Query: 207 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
L+G K D L Q +I R AK + +SA NV ++F+ + L +
Sbjct: 122 LVGNKTD----LADKRQVSIDEGER-RAKELNVMFIETSAKAGHNVKELFRRVAGALPGM 176
Query: 267 PWTVKRNL 274
+ ++NL
Sbjct: 177 EASAEKNL 184
>gi|71894915|ref|NP_001026038.1| ras-related protein Rab-22A [Gallus gallus]
gi|53130292|emb|CAG31475.1| hypothetical protein RCJMB04_6n2 [Gallus gallus]
Length = 194
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 ----NDVREVMEKDAKDYADSIHAIFVETSAKNAININELF 159
>gi|366997238|ref|XP_003678381.1| hypothetical protein NCAS_0J00630 [Naumovozyma castellii CBS 4309]
gi|342304253|emb|CCC72042.1| hypothetical protein NCAS_0J00630 [Naumovozyma castellii CBS 4309]
Length = 218
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 85 SRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNEQERS-LQMAGLNLINKTLMV 142
S T + YD+ +KI L+GD +GK+ V++V N+ S + G++ KTL +
Sbjct: 16 SSTAAKNYDS-----VMKILLIGDSGVGKSCLLVRFVENKFNPSFITTIGIDFKIKTLDI 70
Query: 143 QGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQ 201
QG +I +WD G R + A+ I+ ++D+T T +I WYS + N+
Sbjct: 71 QGRKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFQNIRQWYSTVNEHANE 130
Query: 202 TAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF----K 257
+L+G K D R Q A+ + +SA ++ NVN +F K
Sbjct: 131 QVQLLLVGNKSDLGNR------QVTKEQGEELARELGLPFMEASAKNDDNVNDLFLQLAK 184
Query: 258 FIMAKLFN----LPWTVKRNLTI 276
I K+ N P T K+N+ I
Sbjct: 185 LIQEKIDNDEMGEPRTAKKNVNI 207
>gi|169596668|ref|XP_001791758.1| hypothetical protein SNOG_01101 [Phaeosphaeria nodorum SN15]
gi|111071476|gb|EAT92596.1| hypothetical protein SNOG_01101 [Phaeosphaeria nodorum SN15]
Length = 222
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 77 MEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNE--QERSLQMAGL 133
M A + + R SG S K+ LLG+ +GK+S V ++V ++ R +
Sbjct: 1 MSARVQQGQRPGGSG----SRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAA 56
Query: 134 NLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWY 193
L + + + F IWD G R P+ ++A + ++D+T +L+ W
Sbjct: 57 FLTQTIALDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWV 116
Query: 194 SE-ARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINV 252
E R+ N+ I L G K D V PD + A YA+ F +SA + NV
Sbjct: 117 KELQRQANENIIIALAGNKL-DLVTESPDKRAIQTADAEQYAREAGLLFFETSAKTSENV 175
Query: 253 NKIFKFIMAKLFNLPWTVKRNLTIGE 278
++F I KL L RNL G+
Sbjct: 176 RELFTAIAKKL-PLDQAGPRNLRPGQ 200
>gi|196015793|ref|XP_002117752.1| hypothetical protein TRIADDRAFT_61818 [Trichoplax adhaerens]
gi|190579637|gb|EDV19728.1| hypothetical protein TRIADDRAFT_61818 [Trichoplax adhaerens]
Length = 209
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
K+ LLG+ +GKTS V +Y N+ E+ L + + K L + G RI +IWD G R
Sbjct: 11 KVVLLGEGCVGKTSIVLRYCENKFNEKHLSTLQASYLEKKLNIGGKRINLAIWDTAGQER 70
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVRL 218
PI +++ + ++D+T + + W E RK I + ++G K D L
Sbjct: 71 FHALGPIYYRESHGAILVYDITDEDSFMKVKKWVKELRKMLGNEICLCIVGNKID----L 126
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
D + T+A YA+++ A F +SA N + ++F
Sbjct: 127 EKDRTVHV-TRAEDYAQSVGAVHFHTSAKMNKGIEEVF 163
>gi|399219055|emb|CCF75942.1| unnamed protein product [Babesia microti strain RI]
Length = 220
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 84 LSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLM 141
+S + GY+ + KI LLG+ GKTS V +++ + E + Q G++ ++KT+
Sbjct: 1 MSNAGNDGYNLGFGIKKYKIVLLGEQSSGKTSIVTRFMYDTFESTYQATIGIDFLSKTIT 60
Query: 142 VQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWN- 200
V+ ++ +WD G R +P +D+ A + +D+T+R + + W + R+
Sbjct: 61 VKKTQLRLQLWDTAGQERFRSLMPSYIRDSSAAVITYDITNRKSFENTTKWIDDVRRERA 120
Query: 201 QTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIM 260
AI IL+G K D D + + +AK +SA N++KIF +
Sbjct: 121 NNAILILVGNKTD-----LVDKRQVSYEEGEEHAKKYGMIFQETSAKEGTNISKIFFDVA 175
Query: 261 AKLFNLPWTVKRNLTIGEPIID 282
L + ++TI E ++D
Sbjct: 176 ESLLDFN---AGSVTIPEKLVD 194
>gi|224094073|ref|XP_002192267.1| PREDICTED: ras-related protein Rab-21 [Taeniopygia guttata]
Length = 220
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 15 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 74
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 75 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 131
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + ++ +A YA+++ A + +SA N + ++F
Sbjct: 132 -LEKERHVSV-QEAEMYAESVGAKHYHTSAKQNKGIEELF 169
>gi|147902647|ref|NP_001090471.1| RAB31, member RAS oncogene family [Xenopus laevis]
gi|71682203|gb|AAI00187.1| Rab31 protein [Xenopus laevis]
Length = 193
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 8/162 (4%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVPHQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDD 214
G R P+ + + A + ++D+T T +++ W E R+ I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSTAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCD- 121
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
D++ + +A+ YA ++ A +SA + IN+N++F
Sbjct: 122 ----LNDVREVLEKEAKDYADSINAVFVETSAKNAININELF 159
>gi|346323143|gb|EGX92741.1| Rab5-like protein ypt5 [Cordyceps militaris CM01]
Length = 220
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 5/174 (2%)
Query: 94 TDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMV-QGARIAFS 150
+++ K+ LLG+ +GK+S V +Q S + + G + +T+ + + + F
Sbjct: 13 SNNRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDETTTVKFE 72
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIG 209
IWD G R P+ ++A + ++D+T +L+ W E R+ N+ I L G
Sbjct: 73 IWDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAG 132
Query: 210 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
K D V PD + A A AYAK F +SA NV ++F I KL
Sbjct: 133 NKL-DLVTEQPDKRAIPAADAEAYAKEAGLLFFETSAKTAENVPELFTAIARKL 185
>gi|195012308|ref|XP_001983578.1| GH15503 [Drosophila grimshawi]
gi|193897060|gb|EDV95926.1| GH15503 [Drosophila grimshawi]
Length = 219
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 10/168 (5%)
Query: 101 LKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GDC GKTS ++ GN ER G++ KT+ V+G ++ IWD G
Sbjct: 22 FKIVLIGDCCTGKTSILQRFKTGNYVERHGNTIGVDFSMKTIEVEGKQVKLQIWDTAGQE 81
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFDDFVR 217
R + ++ ++D+T R T ++ W E R++ + + ILIG K D
Sbjct: 82 RFRTITQSYYRANNGVIIVYDITKRATFANLQKWIEEVRRYTASNVLIILIGNKCD---- 137
Query: 218 LPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
+ + +AR + + LF +SA N NV F+ + +L
Sbjct: 138 -LEEEREVDFEEARQMCQYIPEILFVMETSAKENTNVEDAFRCLATEL 184
>gi|224078511|ref|XP_002199135.1| PREDICTED: ras-related protein Rab-22A [Taeniopygia guttata]
Length = 194
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 ----NDVREVMEKDAKDYADSIHAIFVETSAKNAININELF 159
>gi|161085488|ref|NP_001097658.1| Rab26, isoform C [Drosophila melanogaster]
gi|281366559|ref|NP_001163488.1| Rab26, isoform D [Drosophila melanogaster]
gi|442633896|ref|NP_001262151.1| Rab26, isoform E [Drosophila melanogaster]
gi|66772429|gb|AAY55526.1| IP08719p [Drosophila melanogaster]
gi|158028599|gb|AAN12164.2| Rab26, isoform C [Drosophila melanogaster]
gi|189458927|gb|ACD99453.1| IP08419p [Drosophila melanogaster]
gi|272455263|gb|ACZ94759.1| Rab26, isoform D [Drosophila melanogaster]
gi|440216121|gb|AGB94844.1| Rab26, isoform E [Drosophila melanogaster]
Length = 410
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 10/119 (8%)
Query: 102 KISLLGDCQIGKTSFV------KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVG 155
K+ +LGD +GKTS + +YV L G++ NK ++V G R+ IWD
Sbjct: 214 KVIMLGDSGVGKTSLLIRFRDGRYV---PSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTA 270
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
G R +DA A+L ++D+T++ T ++I W E R++ Q + I LIG K D
Sbjct: 271 GQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKAD 329
>gi|66772349|gb|AAY55486.1| IP08619p [Drosophila melanogaster]
Length = 433
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 10/119 (8%)
Query: 102 KISLLGDCQIGKTSFV------KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVG 155
K+ +LGD +GKTS + +YV L G++ NK ++V G R+ IWD
Sbjct: 237 KVIMLGDSGVGKTSLLIRFRDGRYV---PSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTA 293
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
G R +DA A+L ++D+T++ T ++I W E R++ Q + I LIG K D
Sbjct: 294 GQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKAD 352
>gi|145549235|ref|XP_001460297.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428126|emb|CAK92900.1| unnamed protein product [Paramecium tetraurelia]
Length = 218
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 78/182 (42%), Gaps = 18/182 (9%)
Query: 94 TDSDLVSLKISLLGDCQIGKTS------FVKYVGNEQERSLQMAGLNLINKTLMVQGARI 147
T + KI LGD +GKTS F + GNEQ G++ I+KTL V +
Sbjct: 6 TSGPMQKYKIVFLGDQAVGKTSIINRFIFDNFTGNEQP----TVGIDFISKTLQVDNKSV 61
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPIL 207
+WD G R +P +D+ A + FD+T+ + ++ W + ++ + I
Sbjct: 62 RLQLWDTAGQERFRSLIPSYIRDSQAAIICFDITNEKSFQNLPRWIEDVKEERGDEVLIY 121
Query: 208 I-GTKFD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
I G K D + R P QA AK + A SA INV + FK + L
Sbjct: 122 ILGNKIDLENERQIP------TKQAEDKAKELGAQFQEVSAKSAINVAEFFKKLSYDLLG 175
Query: 266 LP 267
P
Sbjct: 176 NP 177
>gi|254939625|ref|NP_067386.3| ras-related protein Rab-37 isoform 1 [Mus musculus]
gi|7677422|gb|AAF67162.1|AF233582_1 GTPase Rab37 [Mus musculus]
gi|26333417|dbj|BAC30426.1| unnamed protein product [Mus musculus]
gi|26333651|dbj|BAC30543.1| unnamed protein product [Mus musculus]
gi|112293035|dbj|BAF02895.1| Rab37 [Mus musculus]
gi|118341700|gb|AAI28021.1| RAB37, member of RAS oncogene family [Mus musculus]
gi|148702512|gb|EDL34459.1| RAB37, member of RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 223
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 9/135 (6%)
Query: 83 ELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKT 139
E S FS YD ++ K+ LLGD +GKT F+ + S + G++ NK
Sbjct: 17 ERSPPFSPNYD-----LTGKVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKV 71
Query: 140 LMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW 199
+ V GAR+ IWD G R +DA A+L ++D+T++ + ++I W +E ++
Sbjct: 72 VTVDGARVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEY 131
Query: 200 NQTAIPI-LIGTKFD 213
Q + I L+G K D
Sbjct: 132 AQRDVVIMLLGNKAD 146
>gi|356548355|ref|XP_003542568.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 211
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 18/188 (9%)
Query: 99 VSLKISLLGDCQIGKTS-FVKYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
+S KI L+GD +GK+S V ++ N E G++ K L V G R+ +IWD G
Sbjct: 13 LSFKILLIGDSAVGKSSLLVSFISNSAEDIAPTIGVDFKIKMLTVGGKRLKLTIWDTAGQ 72
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSI-VGWYSEARKW--NQTAIPILIGTKFD- 213
R + A I+ ++D+T R T ++ + W E + NQ + +L+G K D
Sbjct: 73 ERFRTLTSSYYRGAQGIILVYDVTRRDTFTNLSLVWSKEVELYSTNQNCVKMLVGNKVDR 132
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLP------ 267
D R+ + A A+ + F SA NV + F+ + K+ +P
Sbjct: 133 DSERVVS------KEEGLALAEELGCLFFECSAKTRENVERCFEELALKIMEVPSLLEEG 186
Query: 268 -WTVKRNL 274
VKRN+
Sbjct: 187 STAVKRNI 194
>gi|195480512|ref|XP_002086676.1| GE23262 [Drosophila yakuba]
gi|195495620|ref|XP_002095344.1| GE19744 [Drosophila yakuba]
gi|194181445|gb|EDW95056.1| GE19744 [Drosophila yakuba]
gi|194186466|gb|EDX00078.1| GE23262 [Drosophila yakuba]
Length = 416
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 102 KISLLGDCQIGKTSFV------KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVG 155
K+ +LGD +GKTS + +YV + L G++ NK ++V G R+ IWD
Sbjct: 220 KVIMLGDSGVGKTSLLIRFRDGRYVPSY---FLSTVGIDFRNKVVVVDGTRVKLQIWDTA 276
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
G R +DA A+L ++D+T++ T ++I W E R++ Q + I LIG K D
Sbjct: 277 GQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKAD 335
>gi|121706988|ref|XP_001271697.1| RAB GTPase Ypt5, putative [Aspergillus clavatus NRRL 1]
gi|119399845|gb|EAW10271.1| RAB GTPase Ypt5, putative [Aspergillus clavatus NRRL 1]
Length = 218
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 7/188 (3%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQE--RSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
K+ LLG+ +GK+S V ++V ++ + R + L + + + F IWD G
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQ 77
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFDDFV 216
R P+ ++A + ++D+T +L+ W E R+ N+ + L G K D V
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKL-DLV 136
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNL-T 275
PD + A AYA+ F +SA + NV ++F I KL L RNL T
Sbjct: 137 TENPDKRAIQTADAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKL-PLDQAGPRNLRT 195
Query: 276 IGEPIIDF 283
P +D
Sbjct: 196 TPRPGVDL 203
>gi|255645626|gb|ACU23307.1| unknown [Glycine max]
Length = 211
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 18/188 (9%)
Query: 99 VSLKISLLGDCQIGKTS-FVKYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
+S KI L+GD +GK+S V ++ N E G++ K L V G R+ +IWD G
Sbjct: 13 LSFKILLIGDSAVGKSSLLVSFISNSAEGIAPTIGVDFKIKMLTVGGKRLKLTIWDTAGQ 72
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSI-VGWYSEARKW--NQTAIPILIGTKFD- 213
R + A I+ ++D+T R T ++ + W E + NQ + +L+G K D
Sbjct: 73 ERFRTLTSSYYRGAQGIILVYDVTRRDTFTNLSLVWSKEVELYSTNQNCVKMLVGNKVDR 132
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLP------ 267
D R+ + A A+ + F SA NV + F+ + K+ +P
Sbjct: 133 DSERVVSK------EEGLALAEELGCLFFECSAKTRENVERCFEELALKIMEVPSLLEEG 186
Query: 268 -WTVKRNL 274
VKRN+
Sbjct: 187 STAVKRNI 194
>gi|293340566|ref|XP_002724622.1| PREDICTED: ras-related protein Rab-37-like isoform 1 [Rattus
norvegicus]
gi|149054743|gb|EDM06560.1| rCG35079, isoform CRA_b [Rattus norvegicus]
Length = 223
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 9/135 (6%)
Query: 83 ELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKT 139
E S FS YD ++ K+ LLGD +GKT F+ + S + G++ NK
Sbjct: 17 ERSPPFSPNYD-----LTGKVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKV 71
Query: 140 LMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW 199
+ V GAR+ IWD G R +DA A+L ++D+T++ + ++I W +E ++
Sbjct: 72 VTVDGARVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEY 131
Query: 200 NQTAIPI-LIGTKFD 213
Q + I L+G K D
Sbjct: 132 AQRDVVIMLLGNKAD 146
>gi|380025950|ref|XP_003696725.1| PREDICTED: ras-related protein Rab-43-like [Apis florea]
Length = 219
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 10/168 (5%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GDC GKT V+ G ER G++ KT+++ ++ IWD G
Sbjct: 21 FKIVLIGDCGTGKTCVVQRFRSGTFIERHGNTIGVDFSMKTVLIDDKKVKLQIWDTAGQE 80
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI-PILIGTKFDDFVR 217
R + A ++ ++D+T R T S+ W E R++ + + IL+G K D
Sbjct: 81 RFRTITQSYYRSANGVIVVYDITKRSTFLSLQHWVEEVRRYTSSHVLLILVGNKCD---- 136
Query: 218 LPPDLQWTIATQARAYAKAMKATL--FFSSATHNINVNKIFKFIMAKL 263
L+ +A A + + L +SA N N++ IF ++ ++L
Sbjct: 137 -LESLREVEKGEAEALCQYLPEVLQVVETSAKENTNIDSIFFYLASEL 183
>gi|66802376|ref|XP_629970.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74896809|sp|Q54E92.1|RABG1_DICDI RecName: Full=Ras-related protein RabG1
gi|60463377|gb|EAL61565.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 196
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 11/174 (6%)
Query: 95 DSDLVSLKISLLGDCQIGKTSFV---KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSI 151
DSD+ KI L+GD +GKTS + N QE S+ M ++ NK + + G I
Sbjct: 3 DSDV--FKILLIGDSAVGKTSLLLRFTDPNNFQETSVNMTSVDYKNKNITIDGRTFNLQI 60
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGT 210
WD G R + A +L +D+T + T N++ W E +++ + +L+G
Sbjct: 61 WDTAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNVGLWMQEIQRYGVLGVSRVLVGN 120
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
K D D + A+ A+ YA + +SAT +NV + F + +++
Sbjct: 121 KCD-----LEDRKLVNASIAQEYADILGIPFIETSATTGVNVEEAFMAMADEIY 169
>gi|145257106|ref|XP_001401615.1| GTP-binding protein ypt5 [Aspergillus niger CBS 513.88]
gi|134058525|emb|CAL00734.1| unnamed protein product [Aspergillus niger]
gi|350632151|gb|EHA20519.1| hypothetical protein ASPNIDRAFT_54582 [Aspergillus niger ATCC 1015]
Length = 218
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 7/188 (3%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQE--RSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
K+ LLG+ +GK+S V ++V ++ + R + L + + + F IWD G
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQ 77
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFDDFV 216
R P+ ++A + ++D+T +L+ W E R+ N+ + L G K D V
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKL-DLV 136
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNL-T 275
PD + A AYA+ F +SA + NV ++F I KL L RNL T
Sbjct: 137 TESPDKRAIPTADAEAYAREAGLLFFETSAKTSSNVKELFTAIAKKL-PLDQAGPRNLRT 195
Query: 276 IGEPIIDF 283
P +D
Sbjct: 196 TPRPGVDL 203
>gi|194224580|ref|XP_001490105.2| PREDICTED: ras-related protein Rab-22A-like [Equus caballus]
Length = 194
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E + I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELGQHGPPNIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
V D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 V----DVREVMERDAKDYADSIHAIFVETSAKNAININELF 159
>gi|190406568|gb|EDV09835.1| GTP-binding protein SAS1 [Saccharomyces cerevisiae RM11-1a]
gi|207345675|gb|EDZ72422.1| YFL005Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146187|emb|CAY79446.1| Sec4p [Saccharomyces cerevisiae EC1118]
gi|323355176|gb|EGA87003.1| Sec4p [Saccharomyces cerevisiae VL3]
Length = 215
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 79 AGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNEQERS-LQMAGLNLI 136
+GL +S + +G DS +KI L+GD +GK+ V++V ++ S + G++
Sbjct: 2 SGLRTVSASSGNGKSYDS---IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFK 58
Query: 137 NKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEA 196
KT+ + G ++ +WD G R + A+ I+ ++D+T T +I W+
Sbjct: 59 IKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTV 118
Query: 197 RKW-NQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKI 255
+ N A +L+G K D R+ A Q A AK + SSA ++ NVN+I
Sbjct: 119 NEHANDEAQLLLVGNKSDMETRV------VTADQGEALAKELGIPFIESSAKNDDNVNEI 172
Query: 256 FKFIMAKL 263
F F +AKL
Sbjct: 173 F-FTLAKL 179
>gi|30580479|sp|Q8WQ53.1|RAB21_GEOCY RecName: Full=Ras-related protein Rab-21
gi|18073931|emb|CAC85935.1| Ras-realted small GTPase [Geodia cydonium]
Length = 229
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
V K+ LLG+ +GKTS V +Y N+ E++LQ + + K L + G RI +IWD
Sbjct: 15 VKAKVVLLGEGAVGKTSLVLRYSENKFNDKHEQTLQAS---FVEKRLNIGGKRIQLAIWD 71
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKF 212
G R PI +D+ + ++D+T + + W E ++ + + ++G K
Sbjct: 72 TAGQERYHALGPIYYRDSQGAIIVYDITDEDSFHKARNWIKELKRMLGDKVTLCIVGNKI 131
Query: 213 DDFVRLPPDLQWTIATQ-ARAYAKAMKATLFFSSATHNINVNKIF 256
D D Q T++ + A YA+++ A +++SA + V ++F
Sbjct: 132 D------LDRQRTVSEKDALEYAESVGAKHYYTSAKQSKGVAELF 170
>gi|187471093|sp|Q54FL2.2|RABG2_DICDI RecName: Full=Ras-related protein RabG2
Length = 197
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 96 SDLVSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
SD KI L+GD +GKTS + ++ N QE S+ M ++ NK +++ G IWD
Sbjct: 2 SDPDVFKILLIGDSAVGKTSLLLRFADNSFQETSVNMTSVDYKNKNIVIDGRTFNLQIWD 61
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKF 212
G R + A +L +D+T + T N++ W E +++ + +L+G K
Sbjct: 62 TAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNVRLWMQEIQRYAVLGVSRVLVGNKC 121
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
D D + + AR YA ++ +SA +NV + F + +++
Sbjct: 122 D-----LEDRKLVNTSIAREYADSLGIPFMEASAATGVNVEEAFMAMANEIY 168
>gi|390340630|ref|XP_003725281.1| PREDICTED: ras-related protein Rab-31-like [Strongylocentrotus
purpuratus]
Length = 163
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 100 SLKISLLGDCQIGKTS----FVKYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVG 155
S+K+ LLG +GKTS FV+ GN E+ + G ++++L Q +F++WD
Sbjct: 5 SIKVCLLGTTWVGKTSITTRFVQ--GNFDEKYVSTIGGAFLSRSLYFQNIEYSFALWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDD 214
G R P+ + A A L ++D+T + + + W SE R I I +IG K D
Sbjct: 63 GQERFRSMAPLTYRSAAAALIVYDITKQDSFEDVDSWISELRSMGPEEILIYVIGNKVDL 122
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 259
R D + A YA+ F SSA + IF I
Sbjct: 123 ESRRVVDRE-----VAERYAQTKGVFHFHSSAKTGQGIEDIFYHI 162
>gi|348520672|ref|XP_003447851.1| PREDICTED: ras-related protein Rab-15-like [Oreochromis niloticus]
Length = 211
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMVQGARIAFSIWDVGGDS 158
++ +LGD +GKT ++ + ++ G++ KTL V G ++ IWD G
Sbjct: 9 FRLLMLGDSGVGKTCMLRRFTESDFDTTHISTIGIDFKMKTLEVDGTKVRVQIWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFDDFVR 217
R + A I+F++D+T + + I W S+ ++ Q ILIG K DD +R
Sbjct: 69 RYQTITKQYYRRAQGIIFVYDITDKLSFKHIAKWVSDVDEYTTQKMETILIGNKCDDSLR 128
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 257
+ Q A + F +SA+ NIN+++ FK
Sbjct: 129 -----REVSKNQGTKLAGSYGMEFFETSASKNINISESFK 163
>gi|56790148|dbj|BAD82870.1| small GTPase EhRabX22 [Entamoeba histolytica]
Length = 192
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 13/178 (7%)
Query: 102 KISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
KI LGD +GKT + G+ G + KT+ Q I IWD G R
Sbjct: 4 KIVFLGDSSVGKTCIIGRFMTGDFNTGYEATIGTDFSTKTMTFQNKSIQLQIWDTAGQER 63
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVRL 218
+P +D+ A + ++D+ R + S+ W + R + I + L+G K
Sbjct: 64 YRSLIPSYIRDSSAAVIVYDINDRQSFESVDKWIEDVRSKEKGEIFLFLVGNKL------ 117
Query: 219 PPDLQWTIATQARAYAKAM--KATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNL 274
DL TQ A AK + F +SA NIN+ ++F I KL L V+ ++
Sbjct: 118 --DLGHREVTQKEALAKGQNYQCMCFETSAKTNINITELFNAITEKLSTLEPPVEEHI 173
>gi|355786315|gb|EHH66498.1| Ras-related protein Rab-21, partial [Macaca fascicularis]
Length = 205
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G R
Sbjct: 1 KVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQER 60
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVRL 218
PI +D+ + ++D+T + + W E RK I + ++G K D L
Sbjct: 61 FHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID----L 116
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ +I +A +YA+++ A + +SA N + ++F
Sbjct: 117 EKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 153
>gi|320165409|gb|EFW42308.1| Rab31 protein [Capsaspora owczarzaki ATCC 30864]
Length = 201
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 87/169 (51%), Gaps = 8/169 (4%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVG 155
L +K+ LLGD +GK+S V ++V + E S G + ++KTL+V+ + IWD
Sbjct: 6 LREVKLCLLGDAGVGKSSLVLRFVADSFNENSESTIGASFMSKTLIVEDQTFKYQIWDTA 65
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G + P+ ++A A + ++++T + + ++ W E R++ + I + I D
Sbjct: 66 GQEKYRGLAPMYYRNAAAAIIVYEITRKQSFEALKHWVKELRQFGPSNIILAIAGNKSDL 125
Query: 216 VRLPPDLQWTIAT-QARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
+ Q +++ +A+ YA ++ A +SA NV+ +F+ + +L
Sbjct: 126 -----ESQRQVSSDEAKEYADSIDALFVETSALTADNVSYLFEALSKRL 169
>gi|14318517|ref|NP_116650.1| Sec4p [Saccharomyces cerevisiae S288c]
gi|134394|sp|P07560.1|SEC4_YEAST RecName: Full=Ras-related protein SEC4; AltName: Full=Suppressor of
RHO3 protein 6
gi|172566|gb|AAA35032.1| ras-like protein [Saccharomyces cerevisiae]
gi|836749|dbj|BAA09233.1| Ras-related protein [Saccharomyces cerevisiae]
gi|51013137|gb|AAT92862.1| YFL005W [Saccharomyces cerevisiae]
gi|151940757|gb|EDN59144.1| small GTP binding protein [Saccharomyces cerevisiae YJM789]
gi|256268867|gb|EEU04218.1| Sec4p [Saccharomyces cerevisiae JAY291]
gi|285811889|tpg|DAA12434.1| TPA: Sec4p [Saccharomyces cerevisiae S288c]
gi|349577911|dbj|GAA23078.1| K7_Sec4p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299666|gb|EIW10759.1| Sec4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 215
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 79 AGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNEQERS-LQMAGLNLI 136
+GL +S + +G DS +KI L+GD +GK+ V++V ++ S + G++
Sbjct: 2 SGLRTVSASSGNGKSYDS---IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFK 58
Query: 137 NKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEA 196
KT+ + G ++ +WD G R + A+ I+ ++D+T T +I W+
Sbjct: 59 IKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTV 118
Query: 197 RKW-NQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKI 255
+ N A +L+G K D R+ A Q A AK + SSA ++ NVN+I
Sbjct: 119 NEHANDEAQLLLVGNKSDMETRV------VTADQGEALAKELGIPFIESSAKNDDNVNEI 172
Query: 256 FKFIMAKL 263
F F +AKL
Sbjct: 173 F-FTLAKL 179
>gi|395515756|ref|XP_003762065.1| PREDICTED: ras-related protein Rab-26 [Sarcophilus harrisii]
Length = 261
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 34/207 (16%)
Query: 73 APDTMEAGLVELSRTF--SSG--YDTDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERS- 127
AP+T GL+ R SSG YD V+ K+ L+GD +GKT + + +
Sbjct: 42 APETPRNGLLLSGRPSLSSSGDFYD-----VAFKVMLVGDSGVGKTCLLVRFKDGAFLAG 96
Query: 128 --LQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCT 185
+ G++ NK L V G ++ IWD G R +DA A+L ++D+T+R +
Sbjct: 97 TFISTVGIDFRNKVLNVDGVKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNRAS 156
Query: 186 LNSIVGWYSEARKWNQT-AIPILIGTKFDDFVRLPPDLQWTIATQARA--------YAKA 236
++I W +E ++ Q + +L+G K D +TQ R AK
Sbjct: 157 FDNIQAWLTEIHEYAQKDVVLMLLGNKVD-------------STQERVVKREDGEKLAKE 203
Query: 237 MKATLFFSSATHNINVNKIFKFIMAKL 263
+SA +NV+ FK I +L
Sbjct: 204 YGVPFMETSAKTGLNVDLAFKAIAKEL 230
>gi|89258431|gb|ABD65439.1| Rab21 [Suberites domuncula]
Length = 222
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
V K+ LLG+ +GKTS V +YV N+ E +LQ + + KTL + RI +IWD
Sbjct: 12 VKAKVVLLGEGAVGKTSIVLRYVENKFNDKHESTLQAS---FLQKTLNIGPRRIQLAIWD 68
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKF 212
G R PI +DA + ++D+T + W E R+ I + ++G K
Sbjct: 69 TAGQERFHALGPIYYRDAQGAVVVYDITDVDSFTKAKNWIKELRRIVGDNIAVCIVGNKI 128
Query: 213 DDFVRLPPDLQWTIAT-QARAYAKAMKATLFFSSATHNINVNKIF 256
D + T++ +A YA ++ AT F +SA N V ++F
Sbjct: 129 D------LEKHRTVSHREAEDYASSVGATHFNTSAKQNKGVQELF 167
>gi|12084567|pdb|1G17|A Chain A, Crystal Structure Of Sec4-Guanosine-5'-(Beta,Gamma)-
Imidotriphosphate
gi|12084568|pdb|1G17|B Chain B, Crystal Structure Of Sec4-Guanosine-5'-(Beta,Gamma)-
Imidotriphosphate
Length = 170
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 10/166 (6%)
Query: 101 LKISLLGDCQIGKTSF-VKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
+KI L+GD +GK+ V++V ++ S + G++ KT+ + G ++ IWD G
Sbjct: 4 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQE 63
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFDDFVR 217
R + A+ I+ ++D+T T +I W+ + N A +L+G K D R
Sbjct: 64 RFRTITTAYYRGAMGIILVYDITDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETR 123
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
+ A Q A AK + SSA ++ NVN+IF F +AKL
Sbjct: 124 V------VTADQGEALAKELGIPFIESSAKNDDNVNEIF-FTLAKL 162
>gi|332022383|gb|EGI62695.1| Ras-related protein Rab-21 [Acromyrmex echinatior]
Length = 239
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 10/161 (6%)
Query: 100 SLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
+ K+ LLG+ +GKTS ++YV ++ ++ + + +NK L + G R+ +IWD G
Sbjct: 11 NFKVVLLGEGCVGKTSVALRYVEDKFNDKHITTLQASFLNKKLNINGKRVNLAIWDTAGQ 70
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDFV 216
+ PI + + + ++D+T T + W E +K + I ++I G K D
Sbjct: 71 EKFHALGPIYYRMSNGAILVYDITDEDTFQKVKNWVKELKKMLGSEICLVIAGNKVD--- 127
Query: 217 RLPPDLQWTIAT-QARAYAKAMKATLFFSSATHNINVNKIF 256
L D +AT +A YAK + A F +SA N N+ ++F
Sbjct: 128 -LEKD--RNVATEEAEEYAKQVGAMHFHTSAKLNQNIEEMF 165
>gi|187609396|pdb|3CPH|A Chain A, Crystal Structure Of Sec4 In Complex With Rab-Gdi
Length = 213
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 79 AGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNEQERS-LQMAGLNLI 136
+GL +S + +G DS +KI L+GD +GK+ V++V ++ S + G++
Sbjct: 2 SGLRTVSASSGNGKSYDS---IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFK 58
Query: 137 NKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEA 196
KT+ + G ++ +WD G R + A+ I+ ++D+T T +I W+
Sbjct: 59 IKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTV 118
Query: 197 RKW-NQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKI 255
+ N A +L+G K D R+ A Q A AK + SSA ++ NVN+I
Sbjct: 119 NEHANDEAQLLLVGNKSDMETRV------VTADQGEALAKELGIPFIESSAKNDDNVNEI 172
Query: 256 FKFIMAKL 263
F F +AKL
Sbjct: 173 F-FTLAKL 179
>gi|323305102|gb|EGA58852.1| Sec4p [Saccharomyces cerevisiae FostersB]
gi|323348772|gb|EGA83012.1| Sec4p [Saccharomyces cerevisiae Lalvin QA23]
gi|365765838|gb|EHN07343.1| Sec4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 215
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 79 AGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNEQERS-LQMAGLNLI 136
+GL +S + +G DS +KI L+GD +GK+ V++V ++ S + G++
Sbjct: 2 SGLRTVSASSGNGKSYDS---IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFK 58
Query: 137 NKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEA 196
KT+ + G ++ +WD G R + A+ I+ ++D+T T +I W+
Sbjct: 59 IKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTV 118
Query: 197 RKW-NQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKI 255
+ N A +L+G K D R+ A Q A AK + SSA ++ NVN+I
Sbjct: 119 NEHANDEAQLLLVGNKSDMETRV------VTADQGEALAKELGIPFIESSAKNDDNVNEI 172
Query: 256 FKFIMAKL 263
F F +AKL
Sbjct: 173 F-FTLAKL 179
>gi|12852239|dbj|BAB29331.1| unnamed protein product [Mus musculus]
Length = 194
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T T +++ W E R+ ++ + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKAETFSTLENWVRELRQHGPHSMVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 T----DVREVMERDAKDYADSIHAIFVETSAKNAININELF 159
>gi|325180386|emb|CCA14789.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 369
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 16/222 (7%)
Query: 48 VCSIGKQPAVRYQKLTRRSSSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLG 107
VC I + Y +LT RS S + +P + SS ++LK+ L+G
Sbjct: 62 VCPIS---SSYYNQLTSRSLSSNMDSPVSGSP--------LSSTTSFKDVTLTLKVVLIG 110
Query: 108 DCQIGKTSFVKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVP 165
D Q+GK++ V N S Q G +TL V RI +WD G R +
Sbjct: 111 DSQVGKSNLVLRFTNSTFHAHSEQTVGFEFATRTLRVGKRRIKVQVWDSSGKDRFQSLIA 170
Query: 166 IACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFDDFVRLPPDLQW 224
+ AV + ++D+T+R + +I W + +++ ++ + +L+G K D LP Q
Sbjct: 171 AYYRHAVGAMVVYDVTNRTSFENIERWLRQMQQYAHENLVMVLVGNKC-DLAHLPNSRQV 229
Query: 225 TIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+ AR +A +SA + NV + F+ ++ + L
Sbjct: 230 STLEAAR-FADKYSMEFLETSALDSTNVIEAFRKLIVPVGRL 270
>gi|367012904|ref|XP_003680952.1| hypothetical protein TDEL_0D01570 [Torulaspora delbrueckii]
gi|359748612|emb|CCE91741.1| hypothetical protein TDEL_0D01570 [Torulaspora delbrueckii]
Length = 217
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 11/178 (6%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGAR------IAF 149
+ K+ LLGD +GK+S V ++V N E G +++T+ V+ + I F
Sbjct: 1 MFQFKLVLLGDSSVGKSSIVYRFVKNSFDEFRESTIGAAFLSQTIKVKESDDGEETVIKF 60
Query: 150 SIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK--WNQTAIPIL 207
IWD G R P+ ++A A L ++D+T + +L W +E + + + L
Sbjct: 61 EIWDTAGQERYKSLAPMYYRNANAALVVYDVTQQDSLVKAQSWVNELKNKVGDDDLVICL 120
Query: 208 IGTKFDDFVRLPPDLQWTIAT-QARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
+G K D D + + T +AR+YA + SA +NV +IF+ I KLF
Sbjct: 121 VGNKVDLCDEDAEDNKRAVGTEEARSYANEQNLLFYEVSAKTGLNVQQIFQSIGEKLF 178
>gi|401623107|gb|EJS41224.1| sec4p [Saccharomyces arboricola H-6]
Length = 215
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 79 AGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNEQERS-LQMAGLNLI 136
+GL +S + +G DS +KI L+GD +GK+ V++V ++ S + G++
Sbjct: 2 SGLRTVSASSGNGKSYDS---IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFK 58
Query: 137 NKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEA 196
KT+ + G ++ +WD G R + A+ I+ ++D+T T +I W+
Sbjct: 59 IKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTV 118
Query: 197 RKW-NQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKI 255
+ N A +L+G K D D + A Q A AK + SSA ++ NVN+I
Sbjct: 119 NEHANDEAQLLLVGNKSD------MDTRVVTADQGEALAKELGIPFIESSAKNDNNVNEI 172
Query: 256 FKFIMAKL 263
F F +AKL
Sbjct: 173 F-FTLAKL 179
>gi|300174998|emb|CBK20309.2| unnamed protein product [Blastocystis hominis]
Length = 183
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 10/165 (6%)
Query: 103 ISLLGDCQIGKTSFVKYVGNEQER--SLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRS 160
+ L+GD +GKT+ + N++ S G+ K + V + I IWD G R
Sbjct: 20 VVLIGDSNVGKTNILSRFANDEFNLDSKATVGVEFSAKCVKVNNSIIKAQIWDTAGQERY 79
Query: 161 FDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQ-TAIPILIGTKFDDFVRLP 219
+ AV L ++D+TSR + ++ GW SE R+ + + +LIG K D L
Sbjct: 80 RSITSAYYRGAVGALMVYDITSRSSFENVEGWLSELRQHSDGDMVVVLIGNKCD----LA 135
Query: 220 PDLQWTIAT-QARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
Q +I+T +ARAYA+ +SA +++ F ++ +L
Sbjct: 136 N--QRSISTDEARAYAEKHNMAFIETSAYERTGIDEAFTMVLKRL 178
>gi|12084563|pdb|1G16|A Chain A, Crystal Structure Of Sec4-Gdp
gi|12084564|pdb|1G16|B Chain B, Crystal Structure Of Sec4-Gdp
gi|12084565|pdb|1G16|C Chain C, Crystal Structure Of Sec4-Gdp
gi|12084566|pdb|1G16|D Chain D, Crystal Structure Of Sec4-Gdp
Length = 170
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 10/165 (6%)
Query: 102 KISLLGDCQIGKTSF-VKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
KI L+GD +GK+ V++V ++ S + G++ KT+ + G ++ IWD G R
Sbjct: 5 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQER 64
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFDDFVRL 218
+ A I+ ++D+T T +I W+ + N A +L+G K D R+
Sbjct: 65 FRTITTAYYRGAXGIILVYDITDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDXETRV 124
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
A Q A AK + SSA ++ NVN+IF F +AKL
Sbjct: 125 ------VTADQGEALAKELGIPFIESSAKNDDNVNEIF-FTLAKL 162
>gi|146180823|ref|XP_001021546.2| Ras-related protein Rab11, putative [Tetrahymena thermophila]
gi|146144367|gb|EAS01301.2| Ras-related protein Rab11, putative [Tetrahymena thermophila SB210]
gi|307777778|dbj|BAJ21285.1| Rab-family small GTPase Rab11E [Tetrahymena thermophila]
Length = 206
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 5/172 (2%)
Query: 98 LVSLKISLLGDCQIGKTSFVK-YVGNE-QERSLQMAGLNLINKTLMVQ-GARIAFSIWDV 154
+ + KI L+GD +GKT +K Y NE + S G+ K + ++ G ++ IWD
Sbjct: 6 IATYKIVLVGDTSVGKTHLLKRYSKNELPKNSAPTIGVEFGTKEVTLKDGTKVKAQIWDT 65
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
G R + + + AV L ++D+T T NSI+ W + + I I L+G K D
Sbjct: 66 AGQERYRGILSLHFRRAVGALLVYDITKEKTYNSIMKWMEDLKYLADPDIVIMLVGNKLD 125
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
+ + + +IA +A+ +A K +SA N+ ++F+ ++ +++N
Sbjct: 126 LVTKTQENRKVSIA-EAQQFALDNKLIFKETSAVLGTNIKEVFEQLLQEIYN 176
>gi|12832758|dbj|BAB22245.1| unnamed protein product [Mus musculus]
Length = 215
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G +T + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E R+ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELRRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|1710019|sp|P51154.1|RB22A_CANFA RecName: Full=Ras-related protein Rab-22A; Short=Rab-22
Length = 194
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G P+ + + A + ++D+T T +++ W E R+ I + I D
Sbjct: 63 GQEAFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 I----DVREVMERDAKDYADSIHAIFVETSAKNAININELF 159
>gi|255075421|ref|XP_002501385.1| predicted protein [Micromonas sp. RCC299]
gi|226516649|gb|ACO62643.1| predicted protein [Micromonas sp. RCC299]
Length = 202
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 82/174 (47%), Gaps = 14/174 (8%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIW 152
++ K+ LLGD GK+S V ++V + QE ++ G + +T+ V A + F IW
Sbjct: 6 VMQAKLVLLGDMGAGKSSLVLRFVKGQFFEYQESTI---GAAFLTQTVSVSDATVKFEIW 62
Query: 153 DVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTK 211
D G R P+ + A A + ++D+ S + W E R+ N + L G K
Sbjct: 63 DTAGQERYHSLAPMYYRGAAAAIIVYDIQSPSSFERAKSWVRELQRQGNANLVMALAGNK 122
Query: 212 FDDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D P+ + A +A+AYA + LFF +SA NVN +F I KL
Sbjct: 123 -ADIAEKEPEKRKVDADEAQAYAD--ENGLFFMETSARTAANVNDLFYEIARKL 173
>gi|85115075|ref|XP_964811.1| Rab5-like protein ypt5 [Neurospora crassa OR74A]
gi|28926605|gb|EAA35575.1| Rab5-like protein ypt5 [Neurospora crassa OR74A]
gi|38636468|emb|CAE82003.1| probable GTP-binding protein ypt5 [Neurospora crassa]
gi|350295957|gb|EGZ76934.1| putative GTP-binding protein ypt5 [Neurospora tetrasperma FGSC
2509]
Length = 220
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 5/170 (2%)
Query: 98 LVSLKISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMV-QGARIAFSIWDV 154
K+ LLG+ +GK+S V +Q S + + G + +T+ + + + F IWD
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTIALDENTTVKFEIWDT 76
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFD 213
G R P+ ++A + ++D+T +L+ W E R+ N+ I L G K
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKL- 135
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D V+ PD + A+AYAK F +SA NV +F I KL
Sbjct: 136 DLVQEQPDKRAIQTADAQAYAKEAGLLFFETSAKTAENVQNLFTEIAKKL 185
>gi|125981885|ref|XP_001354946.1| GA21885 [Drosophila pseudoobscura pseudoobscura]
gi|54643258|gb|EAL32002.1| GA21885 [Drosophila pseudoobscura pseudoobscura]
Length = 200
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 78/167 (46%), Gaps = 7/167 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ ++GD +GK+S + ++ + G++ +T+ + G R+ IWD G
Sbjct: 9 FKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIDGLRVKLQIWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R + ++ ++D+T+ + ++ W E + +L+G K DD
Sbjct: 69 RFRTITSTYYRGTHGVIIVYDVTNGDSFANVRRWLEEIQNNCDVVNKVLVGNKNDD---- 124
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
PD + I A+ +AK M L+ +SA NINV+ +F I ++ N
Sbjct: 125 -PDCKVVITEDAQRFAKQMDIELYETSAKDNINVDNMFLSITRQVLN 170
>gi|118093304|ref|XP_421874.2| PREDICTED: ras-related protein Rab-17 [Gallus gallus]
Length = 213
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 8/166 (4%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRS 160
K+ LLG +GK+S +YV N+ + SL G + +T+ ++ A I IWD G +
Sbjct: 21 KMVLLGSTSVGKSSLAYRYVKNDFKESLPTVGCSFFTQTIQLETATIKLEIWDTAGQEKY 80
Query: 161 FDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK--WNQTAIPILIGTKFDDFVRL 218
+ + A A L ++DLT++ TLN W E K + L+G K D
Sbjct: 81 HSVCHLYYRGAHAALLVYDLTNKETLNRAKQWLMELEKEFLPDEIVIALVGNKTD----- 135
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
D + A +A++ +SA N VN +F + +L
Sbjct: 136 LADEREVAAEDGEEFARSRSLLFMETSAKSNHQVNDVFMAVAQELL 181
>gi|399163161|gb|AFP33156.1| rab-21, partial [Caenorhabditis elegans]
Length = 206
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 8/180 (4%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFS 150
+ D KI LLG+ +GK+S V ++V N+ + L + NKT+ V+ +
Sbjct: 4 NVDQKSFKFKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLH 63
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIG 209
IWD G + PI + + +L +FD+T R + + W E + TA +++G
Sbjct: 64 IWDTAGQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVG 123
Query: 210 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWT 269
K D L + Q T A AYA++ A +SA N+ ++ F+ + AK+ T
Sbjct: 124 NKID----LEEERQVT-RQDAEAYAESEGALYMETSAQDNVGISDAFESLTAKMIEHSRT 178
>gi|74219413|dbj|BAE29485.1| unnamed protein product [Mus musculus]
Length = 215
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G DT + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 7 TRPNGPDTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|390462760|ref|XP_003732900.1| PREDICTED: ras-related protein Rab-22A-like [Callithrix jacchus]
Length = 228
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 13/191 (6%)
Query: 71 SPAPDTMEAGLVEL---SRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQER 126
+P+P ++ + +L S SG+ + L + LLGD +GK+S V ++V + +
Sbjct: 11 TPSPASVRDAVCQLRGPSLHVGSGFTSGISL----LCLLGDTGVGKSSIVWRFVEDSFDP 66
Query: 127 SLQMA-GLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCT 185
++ G + + KT+ Q F IWD G R P+ + + A + ++D+T T
Sbjct: 67 NINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEET 126
Query: 186 LNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSS 245
+++ W E R+ I + I D + D++ + A+ YA ++ A +S
Sbjct: 127 FSTLKNWVKELRQHGPPNIVVAIAGNKCDLI----DVREVMERDAKDYADSIHAIFVETS 182
Query: 246 ATHNINVNKIF 256
A + IN+N++F
Sbjct: 183 AKNAININELF 193
>gi|388515701|gb|AFK45912.1| unknown [Medicago truncatula]
Length = 200
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 84/173 (48%), Gaps = 18/173 (10%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ K+ LLGD GK+S V ++V + QE ++ G ++TL V A + F IWD
Sbjct: 9 LNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTI---GAAFFSQTLAVNDATVKFEIWD 65
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKF 212
G R P+ + A A + ++D+TS + + W E +K N + L G+K
Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFSRAKKWVQELQKQGNPNMVMALAGSKS 125
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D D + A +AR YA+ + LFF +SA NVN +F I +L
Sbjct: 126 D-----LEDKRDVTAEEARVYAE--ENGLFFMETSAKSAANVNDVFYEIAKRL 171
>gi|17535871|ref|NP_495854.1| Protein RAB-21 [Caenorhabditis elegans]
gi|3879231|emb|CAA91296.1| Protein RAB-21 [Caenorhabditis elegans]
Length = 207
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 8/180 (4%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFS 150
+ D KI LLG+ +GK+S V ++V N+ + L + NKT+ V+ +
Sbjct: 5 NVDQKSFKFKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLH 64
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIG 209
IWD G + PI + + +L +FD+T R + + W E + TA +++G
Sbjct: 65 IWDTAGQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVG 124
Query: 210 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWT 269
K D L + Q T A AYA++ A +SA N+ ++ F+ + AK+ T
Sbjct: 125 NKID----LEEERQVT-RQDAEAYAESEGALYMETSAQDNVGISDAFESLTAKMIEHSRT 179
>gi|407916415|gb|EKG09787.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 219
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 7/204 (3%)
Query: 85 SRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQE--RSLQMAGLNLINKTLM 141
+R G S K+ LLG+ +GK+S V ++V ++ + R + L +
Sbjct: 3 ARVQPGGRPGGSRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIAL 62
Query: 142 VQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWN 200
+ F IWD G R P+ ++A + ++D+T +L+ W E R+ N
Sbjct: 63 DDNTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVKELQRQAN 122
Query: 201 QTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIM 260
+ + L G K D V PD + A A YA+ F +SA NV ++F I
Sbjct: 123 ENIVIALAGNKL-DLVTENPDKRAIPAADAEQYAREAGLLFFETSAKTAENVRELFTAIA 181
Query: 261 AKLFNLPWTVKRNLTIG-EPIIDF 283
KL L RN+ G P +D
Sbjct: 182 KKL-PLDQAGPRNIRSGPRPGVDL 204
>gi|358390924|gb|EHK40329.1| hypothetical protein TRIATDRAFT_132347 [Trichoderma atroviride IMI
206040]
Length = 220
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 5/173 (2%)
Query: 95 DSDLVSLKISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMV-QGARIAFSI 151
++ K+ LLG+ +GK+S V +Q S + + G + +T+ + + + F I
Sbjct: 14 NTRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEI 73
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGT 210
WD G R P+ ++A + ++D+T +L+ W E R+ N+ I L G
Sbjct: 74 WDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGN 133
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
K D V PD + A AYA+ F +SA NV ++F I KL
Sbjct: 134 KL-DLVNEQPDKRAIPTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKL 185
>gi|400977|sp|P31583.1|RHN1_NICPL RecName: Full=Ras-related protein RHN1
gi|19691|emb|CAA46112.1| small GTP binding protein [Nicotiana plumbaginifolia]
Length = 200
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ K+ LLGD GK+S V ++V + QE ++ G + TL V A + F IWD
Sbjct: 9 LNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTI---GAAFFSSTLAVNNATVKFEIWD 65
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKF 212
G R P+ + A A + ++D+TS + W E +K N + L G K
Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFARAKKWVQELQKQGNPNMVMALAGNKA 125
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D D + A +AR YA+ + LFF +SA +NVN IF I +L
Sbjct: 126 D-----LEDRRKVTAEEARLYAE--ENGLFFMETSAKTAVNVNAIFYEIAKRL 171
>gi|73535775|pdb|1Z0J|A Chain A, Structure Of Gtp-Bound Rab22q64l Gtpase In Complex With
The Minimal Rab Binding Domain Of Rabenosyn-5
Length = 170
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 96 SDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQ-MAGLNLINKTLMVQGARIAFSIWD 153
S L LK+ LLGD +GK+S + ++V + + ++ G + + KT+ Q F IWD
Sbjct: 2 SALRELKVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWD 61
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFD 213
G R P+ + + A + ++D+T T +++ W E R+ +I + I
Sbjct: 62 TAGLERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKC 121
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
D D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 122 DLT----DVREVMERDAKDYADSIHAIFVETSAKNAININELF 160
>gi|347841938|emb|CCD56510.1| similar to ras-related protein rab-5a [Botryotinia fuckeliana]
Length = 221
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 82/189 (43%), Gaps = 6/189 (3%)
Query: 95 DSDLVSLKISLLGDCQIGKTSFV-KYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSI 151
+S K+ LLG+ +GK+S V ++V ++ R + L + + + F I
Sbjct: 13 NSRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEI 72
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGT 210
WD G R P+ ++A + ++D+T +L+ W E R+ N+ I L G
Sbjct: 73 WDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGN 132
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTV 270
K D V PD + A YAK F +SA + NV ++F I KL L
Sbjct: 133 KL-DLVTEQPDKRAITTEDASNYAKEAGLLFFETSAKTSENVRELFTAIAKKL-PLDQAG 190
Query: 271 KRNLTIGEP 279
RN G P
Sbjct: 191 PRNPRAGGP 199
>gi|402594577|gb|EJW88503.1| Rab21 protein [Wuchereria bancrofti]
Length = 223
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 94 TDSDLVSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSI 151
T+S L + KI LLG+ +GKTS ++YV N+ + + + ++K L V G + +I
Sbjct: 10 TNSSLFNFKIVLLGEGAVGKTSLMLRYVENKFSPQHVSTLQASFLSKKLHVDGQAVVLNI 69
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNS--IVGWYSE-ARKWNQTAIPILI 208
WD G + PI +D+ L ++D+T + + W E R ++I
Sbjct: 70 WDTAGQEKFHALGPIYYRDSHGALLIYDVTDTNSFEKAPVKMWVKELKRMLGDDVYLVII 129
Query: 209 GTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
G K D D +A YAK++ A F +SA NI V ++F +++ L
Sbjct: 130 GNKVDLERNRNVD-----TDEAIGYAKSIGAEHFETSAKDNIGVTQVFDYLVKGL 179
>gi|432943838|ref|XP_004083295.1| PREDICTED: ras-related protein Rab-21-like [Oryzias latipes]
Length = 220
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 8/176 (4%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 15 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNITGKRVNLAIWDTAGQ 74
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 75 ERFHALGPIYYRDSNGAVLVYDVTDEDSFQKVKNWVKELRKMLGNDICLCIVGNKID--- 131
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKR 272
L D ++ A +YA+++ A + +SA N + ++F + ++ +R
Sbjct: 132 -LDKDRHVSV-EDAESYAESVGAKHYHTSAKLNKGIEELFLDLCKRMMETAHAEER 185
>gi|307184090|gb|EFN70625.1| Ras-related protein Rab-39B [Camponotus floridanus]
Length = 218
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 7/170 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQ-GARIAFSIWDVGGD 157
++ L+GD +GK+S +KY G E S G++ + + V+ G RI +WD G
Sbjct: 10 FRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARLIEVKDGTRIKLQLWDTAGQ 69
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI--LIGTKFDDF 215
R +++V L ++D+ +R + I W EAR+ + P+ L+G K D
Sbjct: 70 ERFRSITKSYYRNSVGALLIYDVCNRASFEHIPQWMMEARRHIEPHRPVFALVGCKLD-- 127
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
+ + +ARA+A +SA INV + F+ + +++N
Sbjct: 128 LVTNGGRREVSKEEARAFADEHGVHHIETSAKTGINVEEAFRAVTQEVYN 177
>gi|408400098|gb|EKJ79185.1| hypothetical protein FPSE_00660 [Fusarium pseudograminearum CS3096]
Length = 220
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 5/174 (2%)
Query: 94 TDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMV-QGARIAFS 150
T++ K+ LLG+ +GK+S V +Q S + + G + +T+ + + + F
Sbjct: 13 TNTRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFE 72
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIG 209
IWD G R P+ ++A + ++D+T +L+ W E R+ N+ + L G
Sbjct: 73 IWDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIVIALAG 132
Query: 210 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
K D V PD + A AYA+ F +SA NV +F I KL
Sbjct: 133 NKL-DLVTEQPDKRAISTADAEAYAREAGLLFFETSAKTAENVQTLFTAIAKKL 185
>gi|449478127|ref|XP_004155229.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 220
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFS 150
D D D + K+ L+GD +GK++ + ++ NE S G+ +TL V+G +
Sbjct: 6 DDDYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQ 64
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 209
IWD G R + A+ L ++D+T T +++ W E R + I I LIG
Sbjct: 65 IWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIG 124
Query: 210 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWT 269
K D L+ A++YA+ + +SA NV K F+ I+++++ +
Sbjct: 125 NKTD-----LKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRI--I 177
Query: 270 VKRNLTIGEP 279
K++L EP
Sbjct: 178 SKKSLNSEEP 187
>gi|126341423|ref|XP_001369723.1| PREDICTED: ras-related protein Rab-5A-like [Monodelphis domestica]
Length = 215
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G +T + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALAGNKADLASKRAVDFQ-----EAQSYADDNSLLFMETSAKTSVNVNEIFMAIAKKL 181
>gi|449431866|ref|XP_004133721.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 216
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFS 150
D D D + K+ L+GD +GK++ + ++ NE S G+ +TL V+G +
Sbjct: 6 DDDYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQ 64
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 209
IWD G R + A+ L ++D+T T +++ W E R + I I LIG
Sbjct: 65 IWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIG 124
Query: 210 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWT 269
K D L+ A++YA+ + +SA NV K F+ I+++++ +
Sbjct: 125 NKTD-----LKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRI--I 177
Query: 270 VKRNLTIGEP 279
K++L EP
Sbjct: 178 SKKSLNSEEP 187
>gi|340517201|gb|EGR47446.1| rab5-like GTPase [Trichoderma reesei QM6a]
Length = 220
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 5/173 (2%)
Query: 95 DSDLVSLKISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMV-QGARIAFSI 151
++ K+ LLG+ +GK+S V +Q S + + G + +T+ + + + F I
Sbjct: 14 NTRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEI 73
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGT 210
WD G R P+ ++A + ++D+T +L+ W E R+ N+ I L G
Sbjct: 74 WDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGN 133
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
K D V PD + A AYA+ F +SA NV ++F I KL
Sbjct: 134 KL-DLVNEQPDKRAISTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKL 185
>gi|302927547|ref|XP_003054520.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735461|gb|EEU48807.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 220
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 5/174 (2%)
Query: 94 TDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMV-QGARIAFS 150
T++ K+ LLG+ +GK+S V +Q S + + G + +T+ + + + F
Sbjct: 13 TNTRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFE 72
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIG 209
IWD G R P+ ++A + ++D+T +L+ W E R+ N+ I L G
Sbjct: 73 IWDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAG 132
Query: 210 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
K D V PD + A AYA+ F +SA NV +F I KL
Sbjct: 133 NKL-DLVTEQPDKRAIPTADAEAYAREAGLLFFETSAKTAENVANLFTAIAKKL 185
>gi|398403677|ref|XP_003853305.1| ras small GTPase related protein [Zymoseptoria tritici IPO323]
gi|339473187|gb|EGP88281.1| ras small GTPase related protein [Zymoseptoria tritici IPO323]
Length = 225
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 5/183 (2%)
Query: 85 SRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQE--RSLQMAGLNLINKTLM 141
+R G + + K+ LLG+ +GK+S V ++V ++ + R + L +
Sbjct: 3 ARMQQGGRPSGARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIAL 62
Query: 142 VQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWN 200
+ + F IWD G R P+ ++A + ++D+T +L+ W E R+ N
Sbjct: 63 DEQTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVKELQRQAN 122
Query: 201 QTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIM 260
+ I L G K D V PD + A AYA+ F +SA NV ++F I
Sbjct: 123 ENIIIALAGNKA-DLVAEQPDKRAVPTADAEAYAREANLLFFETSAKTAENVKELFTAIA 181
Query: 261 AKL 263
KL
Sbjct: 182 KKL 184
>gi|355560060|gb|EHH16788.1| hypothetical protein EGK_12135 [Macaca mulatta]
Length = 215
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G +T + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A++ ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAVIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMKTSAKTSMNVNEIFMAIAKKL 181
>gi|389632835|ref|XP_003714070.1| GTP-binding protein ypt5 [Magnaporthe oryzae 70-15]
gi|351646403|gb|EHA54263.1| GTP-binding protein ypt5 [Magnaporthe oryzae 70-15]
Length = 221
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 5/170 (2%)
Query: 98 LVSLKISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMV-QGARIAFSIWDV 154
K+ LLG+ +GK+S V +Q S + + G + +T+ + + + F IWD
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDT 76
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFD 213
G R P+ ++A + ++D+T +L+ W E R+ N+ I L G K
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKL- 135
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D V PD + ++A AYA+ F +SA NV +F I KL
Sbjct: 136 DLVTEQPDKRAVPTSEAEAYAREAGLLFFETSAKTAENVRDLFTAIAKKL 185
>gi|149898836|gb|ABR27886.1| Ras-related small GTPase [Triatoma infestans]
Length = 218
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
+ K+ LLG+ +GKTS V +YV ++ E+ L +NK L + G RI +IWD G
Sbjct: 14 NFKVVLLGEGCVGKTSVVLRYVEDKFNEKHLTTLQATFLNKKLNIGGKRINLAIWDTAGQ 73
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDFV 216
R PI + + + ++D+T + + W E +K + I + I G K D
Sbjct: 74 ERFHALGPIYYRMSNGAVLVYDITDEDSFQKVKNWVKELKKMLGSEICLTIAGNKID--- 130
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + + T A YA ++ A F +SA N + ++F
Sbjct: 131 -LQKERNVPVET-AENYAASVGAVHFHTSAKQNTGIEEMF 168
>gi|407040045|gb|EKE39952.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 209
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 24/195 (12%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
+ I+L GD +GKT F K G + G ++I K L++ G + +WD G
Sbjct: 6 ISIALSGDAFVGKTCFFKRFSSGEFNPNTASSIGCDVICKKLILDGKQYNVQLWDTAGQE 65
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGW---YSEARKWNQTAIPILIGTKFDDF 215
++ ILFMFD+T+ + I W + E + ++ + +L+G K D
Sbjct: 66 MFRSTTATYFRNRHCILFMFDVTNSESFTHIEDWMKVFYEIQNEDKKTLLVLVGNKNDMI 125
Query: 216 V--RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL-------FNL 266
++ P+ A+ +AK+ F SA NIN++ I +F++ +L L
Sbjct: 126 AERQVSPE-------DAKDFAKSHNINYFECSAKENINIDNIIEFVIRELRLQRMLVETL 178
Query: 267 PWTVKRNLTIGEPII 281
P +++ I EPII
Sbjct: 179 PKEIEK---IDEPII 190
>gi|432858229|ref|XP_004068856.1| PREDICTED: ras-related protein Rab-22A-like [Oryzias latipes]
Length = 194
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 8/169 (4%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQ-MAGLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GKTS V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKTSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDD 214
G R P+ + + A + ++D+T + ++ W E R+ I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSAAAVIVYDITKEDSFQTLKNWVKELRQHGPPNIVVAIAGNKCD- 121
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D + A+ YA+++ A +SA + IN+N++F I ++
Sbjct: 122 ----LSDAREVSEKDAKDYAESIHAIFVETSAKNAININEVFTEISKRI 166
>gi|123482533|ref|XP_001323810.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|67944359|gb|AAY83815.1| small Rab GTPase Rab5a [Trichomonas vaginalis]
gi|121906682|gb|EAY11587.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 201
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 96 SDLVSLKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQGARIAFSIWD 153
S+L K+ +LG +GK+S V + G+ E G ++KT+ + + IWD
Sbjct: 7 SNLKEAKVVMLGSTTVGKSSIVTMLTRGSFSESCASTIGAAFLSKTINLGDQELKLQIWD 66
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFD 213
GG R P+ ++A A + ++D+TS + N + W E R+ +I I +
Sbjct: 67 TGGSERYRAMAPMYFQNANAAIIVYDITSSTSYNDVESWLKELREKGPASIIIALAGNKS 126
Query: 214 DFVRLPPDLQWTIATQ-ARAYAKAMKATLF-FSSATHNINVNKIF 256
D D Q +AT+ A+++A+ +F +SA IN+ +IF
Sbjct: 127 DL-----DQQRCVATEDAQSFAQKHGIPIFKETSALKGINIQEIF 166
>gi|307174062|gb|EFN64749.1| Ras-related protein Rab-24 [Camponotus floridanus]
Length = 201
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 78/182 (42%), Gaps = 12/182 (6%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGN--EQERSLQMA-GLNLINKTLMVQGARIAFSIWDV 154
V LKI LLG+ +GKTS + +YV + R Q G K + V G + IWD
Sbjct: 4 VDLKIVLLGNAMVGKTSLMQRYVHDSFNGNRPYQNTIGTVFAAKQVQVNGVSLVMGIWDT 63
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFD- 213
G + + A A + +D+T T W E R + L TK D
Sbjct: 64 AGSEKYDAMTRTYYRGAKAAIVCYDITKFSTFQRAKHWVRELRSIEENCKVYLCATKKDL 123
Query: 214 ---DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTV 270
FV PDLQ T+ YA+ + LF +S+ NV+K+F I+ + P +
Sbjct: 124 CDEGFVSDDPDLQNTV----EKYARGTQTKLFITSSKTGENVDKLFDEIVQDFVSNPENL 179
Query: 271 KR 272
++
Sbjct: 180 QQ 181
>gi|242091099|ref|XP_002441382.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
gi|241946667|gb|EES19812.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
Length = 220
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 89 SSGYDTDSDLVSL-KISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGA 145
GY + D L K+ L+GD +GK++ + ++ NE S G+ ++L V G
Sbjct: 5 GGGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGK 64
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAI 204
I IWD G R + AV L ++D+T R T +++ W E R +Q+ +
Sbjct: 65 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQSIV 124
Query: 205 PILIGTKFDDFVRLPPDLQWTIAT---QARAYAKAMKATLFFSSATHNINVNKIFKFIMA 261
+LIG K DL+ +A A+ YA+A +SA NV+ F ++
Sbjct: 125 VMLIGNK--------SDLRHLVAVSTDDAKEYAEAESMYFMETSALDATNVDNAFSEVLT 176
Query: 262 KLFNL 266
+++ +
Sbjct: 177 QIYQI 181
>gi|115495915|ref|NP_001070133.1| ras-related protein Rab-21 [Danio rerio]
gi|115313619|gb|AAI24523.1| Zgc:154045 [Danio rerio]
gi|182891700|gb|AAI65035.1| Zgc:154045 protein [Danio rerio]
Length = 216
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 10 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNITGKRVNLAIWDTAGQ 69
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 70 ERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 126
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + ++ +A YA+++ A + +SA N + ++F
Sbjct: 127 -LEKERHVSV-EEAEGYAESVGAKHYHTSAKLNKGIEELF 164
>gi|46577707|sp|Q9JKM7.2|RAB37_MOUSE RecName: Full=Ras-related protein Rab-37; Flags: Precursor
gi|26341240|dbj|BAC34282.1| unnamed protein product [Mus musculus]
Length = 223
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 9/135 (6%)
Query: 83 ELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKT 139
E S FS YD ++ K+ LLGD +GKT F+ + S + G++ NK
Sbjct: 17 ERSPPFSPNYD-----LTGKVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDSRNKV 71
Query: 140 LMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW 199
+ V GAR+ IWD G R +DA A+L ++D+T++ + ++I W +E ++
Sbjct: 72 VTVDGARVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEY 131
Query: 200 NQTAIPI-LIGTKFD 213
Q + I L+G K D
Sbjct: 132 AQRDVVIMLLGNKAD 146
>gi|357460687|ref|XP_003600625.1| GTP binding protein [Medicago truncatula]
gi|355489673|gb|AES70876.1| GTP binding protein [Medicago truncatula]
Length = 200
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 18/173 (10%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ K+ LLGD GK+S V ++V + QE ++ G ++TL V A + F IWD
Sbjct: 9 LNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTI---GAAFFSQTLAVNDATVKFEIWD 65
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKF 212
G R P+ + A A + ++D+TS + + W E +K N + L G K
Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFSRAKKWVQELQKQGNPNMVMALAGNKS 125
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D D + A +AR YA+ + LFF +SA NVN +F I +L
Sbjct: 126 D-----LEDKRKVTAEEARVYAE--ENGLFFMETSAKSAANVNDVFYEIAKRL 171
>gi|119180268|ref|XP_001241623.1| ras-related protein [Coccidioides immitis RS]
gi|303321211|ref|XP_003070600.1| Ras-related protein ypt5, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240110296|gb|EER28455.1| Ras-related protein ypt5, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320035923|gb|EFW17863.1| GTP-binding protein ypt5 [Coccidioides posadasii str. Silveira]
gi|392866497|gb|EJB11129.1| GTP-binding protein ypt5 [Coccidioides immitis RS]
Length = 217
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 6/181 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQE--RSLQMAGLNLINKTLMVQGARIAFSIWDV 154
K+ LLG+ +GK+S V ++V ++ + R + L + + + F IWD
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDT 74
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFD 213
G R P+ ++A + ++D+T +L+ W E R+ N+ I L G K
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGNKL- 133
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRN 273
D V PD + A AYA+ F +SA + NV ++F I KL L RN
Sbjct: 134 DLVTDSPDKRAVQTADAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKL-PLDQAGPRN 192
Query: 274 L 274
L
Sbjct: 193 L 193
>gi|195592112|ref|XP_002085780.1| GD14951 [Drosophila simulans]
gi|194197789|gb|EDX11365.1| GD14951 [Drosophila simulans]
Length = 265
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 14/148 (9%)
Query: 75 DTMEAGLVELSR-TFSSG-YDTDSDLVSLKISLLGDCQIGKTSFV------KYVGNEQER 126
+T +A + EL R F G Y+ + S + +LGD +GKTS + +YV
Sbjct: 42 ETTQARIEELRRRPFGDGCYNPPAAPAS--VIMLGDSGVGKTSLLIRFRDGRYV---PSY 96
Query: 127 SLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTL 186
L G++ NK ++V G R+ IWD G R +DA A+L ++D+T++ T
Sbjct: 97 FLSTVGIDFRNKVVVVDGTRVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTY 156
Query: 187 NSIVGWYSEARKWNQTAIPI-LIGTKFD 213
++I W E R++ Q + I LIG K D
Sbjct: 157 DNIRAWLGEIREYAQEDVVIVLIGNKAD 184
>gi|547478|emb|CAA85733.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098297|prf||2115367E small GTP-binding protein
Length = 200
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ K+ LLGD GK+S V ++V + QE ++ G ++TL V A + F IWD
Sbjct: 9 LNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTI---GAAFFSQTLAVNDATVKFEIWD 65
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKF 212
G R P+ + A A + ++D+TS + W E +K N + L G K
Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMALTGNKS 125
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D D + A +AR YA+ + LFF +SA NVN +F I +L
Sbjct: 126 D-----LEDKRKVTAEEARVYAE--ENGLFFMETSAKSAANVNDVFYEIAKRL 171
>gi|194893325|ref|XP_001977854.1| GG18010 [Drosophila erecta]
gi|195479590|ref|XP_002100946.1| GE17342 [Drosophila yakuba]
gi|190649503|gb|EDV46781.1| GG18010 [Drosophila erecta]
gi|194188470|gb|EDX02054.1| GE17342 [Drosophila yakuba]
Length = 201
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 78/167 (46%), Gaps = 7/167 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ ++GD +GK+S + ++ + G++ +T+ ++G R+ IWD G
Sbjct: 9 FKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R + ++ ++D+T+ + ++ W E + +L+G K DD
Sbjct: 69 RFRTITSTYYRGTHGVIVVYDVTNGDSFANVRRWLEEIQNNCDVVKKVLVGNKNDD---- 124
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
PD + I A+ +AK M LF +SA NINV +F I ++ +
Sbjct: 125 -PDRKVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLD 170
>gi|20129057|ref|NP_608373.1| Rab35, isoform A [Drosophila melanogaster]
gi|320542347|ref|NP_001188678.1| Rab35, isoform B [Drosophila melanogaster]
gi|442617060|ref|NP_001259739.1| Rab35, isoform D [Drosophila melanogaster]
gi|195345901|ref|XP_002039507.1| GM22691 [Drosophila sechellia]
gi|195567823|ref|XP_002107458.1| GD15551 [Drosophila simulans]
gi|7289283|gb|AAF45371.1| Rab35, isoform A [Drosophila melanogaster]
gi|20151577|gb|AAM11148.1| LD21953p [Drosophila melanogaster]
gi|194134733|gb|EDW56249.1| GM22691 [Drosophila sechellia]
gi|194204865|gb|EDX18441.1| GD15551 [Drosophila simulans]
gi|220944822|gb|ACL84954.1| Rab35-PA [synthetic construct]
gi|220954600|gb|ACL89843.1| Rab35-PA [synthetic construct]
gi|318069472|gb|ADV37760.1| Rab35, isoform B [Drosophila melanogaster]
gi|440216975|gb|AGB95578.1| Rab35, isoform D [Drosophila melanogaster]
Length = 201
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 78/167 (46%), Gaps = 7/167 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ ++GD +GK+S + ++ + G++ +T+ ++G R+ IWD G
Sbjct: 9 FKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R + ++ ++D+T+ + ++ W E + +L+G K DD
Sbjct: 69 RFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDVVKKVLVGNKNDD---- 124
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
PD + I A+ +AK M LF +SA NINV +F I ++ +
Sbjct: 125 -PDRKVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLD 170
>gi|115495947|ref|NP_001069654.1| ras-related protein Rab-5A [Bos taurus]
gi|344288083|ref|XP_003415780.1| PREDICTED: ras-related protein Rab-5A-like [Loxodonta africana]
gi|122144200|sp|Q0IIG7.1|RAB5A_BOVIN RecName: Full=Ras-related protein Rab-5A
gi|113911876|gb|AAI22652.1| RAB5A, member RAS oncogene family [Bos taurus]
Length = 215
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G +T + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
Query: 264 -FNLPWTVKRNLTIGEPI 280
N P N T G +
Sbjct: 182 PKNEPQNPGANSTRGRGV 199
>gi|178056558|ref|NP_001116652.1| ras-related protein Rab-5A [Sus scrofa]
gi|122131883|sp|Q06AU6.1|RAB5A_PIG RecName: Full=Ras-related protein Rab-5A
gi|115394760|gb|ABI97174.1| RAB5A [Sus scrofa]
Length = 215
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G +T + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
Query: 264 -FNLPWTVKRNLTIGEPI 280
N P N T G +
Sbjct: 182 PKNEPQNPGINCTRGRGV 199
>gi|145515727|ref|XP_001443763.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411152|emb|CAK76366.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 10/187 (5%)
Query: 100 SLKISLLGDCQIGKTSFVKYVGNEQ--ERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
+KI+ LG+ +GK+S VK E+ E + G + + K + Q +I IWD G
Sbjct: 4 EIKITFLGNSGVGKSSIVKRYCFEEFDEHNQSNLGADYVPKEMEYQNNKIKLQIWDTAGQ 63
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKFD--- 213
+ VP+ ++A A++ ++D+T + + + W S + ++ + L+G K D
Sbjct: 64 EKFRSLVPLFLRNAQAVIIVYDITQKSSFTQLKEWVSSLEQICSKNQLFFLVGNKCDLIE 123
Query: 214 -DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVK- 271
+ V Q++ Q Y + +KA L ++S +N + ++F+ I+ + +K
Sbjct: 124 QEQVTYDEAKQYSYVQQ--PYIQNLKAPLQYTSCKNNEGIQELFQKIVEEYLKQEEELKN 181
Query: 272 RNLTIGE 278
+ L I E
Sbjct: 182 KELLINE 188
>gi|12311684|emb|CAC24477.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ K+ LLGD GK+S V ++V + QE ++ G ++TL V A + F IWD
Sbjct: 9 LNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTI---GAAFFSQTLAVNDATVKFEIWD 65
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKF 212
G R P+ + A A + ++D+TS + W E +K N + L G K
Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKA 125
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D D + A +AR YA+ + LFF +SA NVN +F I +L
Sbjct: 126 D-----LEDKRKVTAEEARVYAE--ENGLFFMETSAKTAANVNDVFHEIAKRL 171
>gi|123967398|ref|XP_001313874.1| Ras family protein [Trichomonas vaginalis G3]
gi|121895785|gb|EAY00957.1| Ras family protein [Trichomonas vaginalis G3]
Length = 196
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 87/183 (47%), Gaps = 10/183 (5%)
Query: 99 VSLKISLLGDCQIGKTSFVKYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
V K+ +GD +GKTS + + + L G N + T+ ++G ++ +IWD G
Sbjct: 8 VKGKVVFVGDASVGKTSLIYHYNQTKGNPLPTVGANSVPCTVPIEGKTVSLNIWDTAGQE 67
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
VP+ + + A + ++D T++ + ++I WY A + + I++ K
Sbjct: 68 NFQCLVPMFARCSNAAIIVYDSTNKQSFDNIALWYKYAIEESNVPNVIIVSNK------- 120
Query: 219 PPDLQWTI-ATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIG 277
DL+ I A + + + LFF+SA NV+ +F+ I A++ + + N I
Sbjct: 121 -SDLESVITAEEIHSMKEKYNCPLFFTSAITGSNVDILFREI-AEIVDKEQSKDANRAID 178
Query: 278 EPI 280
+PI
Sbjct: 179 QPI 181
>gi|195441269|ref|XP_002068437.1| GK20471 [Drosophila willistoni]
gi|194164522|gb|EDW79423.1| GK20471 [Drosophila willistoni]
Length = 194
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 105 LLGDCQIGKTSFV------KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
+LGD +GKTS + +YV L G++ NK ++V G R+ IWD G
Sbjct: 3 MLGDSGVGKTSLLIRFRDGRYV---PSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTAGQE 59
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
R +DA A+L ++D+T++ T ++I W E R++ Q + I LIG K D
Sbjct: 60 RFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKAD 115
>gi|156085268|ref|XP_001610116.1| Rab11b protein [Babesia bovis T2Bo]
gi|154797368|gb|EDO06548.1| Rab11b protein, putative [Babesia bovis]
Length = 232
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 5/169 (2%)
Query: 102 KISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTL-MVQGARIAFSIWDVGGDS 158
KI LLGD +GK+ + + G +++ G+ +T+ + G + IWD G
Sbjct: 11 KIILLGDATVGKSHLLSHYIRGTLPKQAKATIGVEFATRTVPLASGGTVKAQIWDTAGQE 70
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI-PILIGTKFDDFVR 217
R + AV L ++D+T+R + + W E R + I +L+G K D ++
Sbjct: 71 RYRSITSAHYRRAVGALLVYDITNRQSFYNCHKWLDELRMAAEPDIVVVLVGNKIDLAIQ 130
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
P ++ QA +A LF +SA NV +F+F++ ++ NL
Sbjct: 131 -DPSVRQVHREQATMFANEWNLHLFEASAVSGYNVKDVFEFLLQEIHNL 178
>gi|358387599|gb|EHK25193.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 220
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 5/173 (2%)
Query: 95 DSDLVSLKISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMV-QGARIAFSI 151
++ K+ LLG+ +GK+S V +Q S + + G + +T+ + + + F I
Sbjct: 14 NTRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEI 73
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGT 210
WD G R P+ ++A + ++D+T +L+ W E R+ N+ I L G
Sbjct: 74 WDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGN 133
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
K D V PD + A AYA+ F +SA NV ++F I KL
Sbjct: 134 KL-DLVTEQPDKRAIPTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKL 185
>gi|114585675|ref|XP_516319.2| PREDICTED: ras-related protein Rab-5A [Pan troglodytes]
gi|397511743|ref|XP_003826226.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Pan paniscus]
gi|410210354|gb|JAA02396.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410263980|gb|JAA19956.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410302036|gb|JAA29618.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410335267|gb|JAA36580.1| RAB5A, member RAS oncogene family [Pan troglodytes]
Length = 216
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 9/201 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G +T + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
Query: 264 -FNLPWTVKRNLTIGEPIIDF 283
N P N G +D
Sbjct: 182 PKNEPQNPGANSARGRGGVDL 202
>gi|351728017|ref|NP_001235133.1| uncharacterized protein LOC100499980 [Glycine max]
gi|255628259|gb|ACU14474.1| unknown [Glycine max]
Length = 216
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 10/182 (5%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +TL V+G + IWD G
Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGGTVKAQIWDTAGQE 72
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVR 217
R + A+ L ++D+T T ++ W E R I I LIG K D
Sbjct: 73 RYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIGNKTD---- 128
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIG 277
L+ A+ Y++ + +SA NV K F+ I+A+++ + K++L+
Sbjct: 129 -LKHLRAVATEDAQGYSEKEGLSFIETSALEATNVEKAFQTILAEIYRI--ISKKSLSSN 185
Query: 278 EP 279
EP
Sbjct: 186 EP 187
>gi|291232375|ref|XP_002736136.1| PREDICTED: RAS-related protein RAB-22A-like [Saccoglossus
kowalevskii]
Length = 178
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 6/161 (3%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
+K+ LLGD +GK+S V ++V + S G + ++KTL+V F IWD G
Sbjct: 6 IKLCLLGDSGVGKSSLVQRFVSDTFNTHSQPTIGASFMSKTLVVDDQSYKFQIWDTAGQE 65
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
+ P+ + A A + ++D+T + +++ W E ++ + + I D V
Sbjct: 66 KYRGLAPMYYRGAAAAIIVYDITRESSFSAVKMWVRELEQYGPGDVVLAIAGNKADLV-- 123
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 259
D + +A YA + AT +SA +NV ++F I
Sbjct: 124 --DQREVTYDEAHKYADQINATFVETSAKTAVNVTQLFTAI 162
>gi|340709811|ref|XP_003393494.1| PREDICTED: ras-related protein Rab-39B-like [Bombus terrestris]
gi|350410358|ref|XP_003489019.1| PREDICTED: ras-related protein Rab-39B-like [Bombus impatiens]
Length = 218
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 7/170 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQ-GARIAFSIWDVGGD 157
++ L+GD +GK+S +KY G E S G++ + + V+ G RI +WD G
Sbjct: 10 FRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARLIEVKDGTRIKLQLWDTAGQ 69
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI--LIGTKFDDF 215
R +++V L ++D+ +R + I W EAR+ + P+ L+G K D
Sbjct: 70 ERFRSITKSYYRNSVGALLVYDVCNRASFEHIPQWMMEARRHIEPHRPVFALVGCKLD-- 127
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
+ + +ARA+A +SA +NV + F+ + +++N
Sbjct: 128 LVTNGSRREVSKEEARAFADQHGVHHIETSAKTGVNVEEAFRTVTQEVYN 177
>gi|451852641|gb|EMD65936.1| hypothetical protein COCSADRAFT_198789 [Cochliobolus sativus
ND90Pr]
gi|451997104|gb|EMD89569.1| hypothetical protein COCHEDRAFT_1021897 [Cochliobolus
heterostrophus C5]
Length = 221
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 6/187 (3%)
Query: 96 SDLVSLKISLLGDCQIGKTSFV-KYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIW 152
S K+ LLG+ +GK+S V ++V ++ R + L + + + F IW
Sbjct: 15 SRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDENTTVKFEIW 74
Query: 153 DVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTK 211
D G R P+ ++A + ++D+T +L+ W E R+ N+ I L G K
Sbjct: 75 DTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGNK 134
Query: 212 FDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVK 271
D V PD + A YA+ F +SA + NV ++F I KL +
Sbjct: 135 L-DLVTESPDKRAISTADAEQYAREAGLLFFETSAKTSENVKELFTAIAKKL-PIDQAGP 192
Query: 272 RNLTIGE 278
RNL G+
Sbjct: 193 RNLRPGQ 199
>gi|123484501|ref|XP_001324283.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121907163|gb|EAY12060.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 193
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 10/168 (5%)
Query: 100 SLKISLLGDCQIGKTSFV--KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S KI LLG+ GKTS + K +G G N + + ++ + +WD G
Sbjct: 8 SYKIILLGNSGTGKTSIIDRKRLGTTAPDLHPTIGCNSTDMVINLKDKSVKLKVWDTAGQ 67
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFDDFV 216
VPI + A A L +FD+T ++ S+ GW S + T +P ++G K D
Sbjct: 68 EEYKSIVPIYTRGAHAALLVFDVTDMSSIQSLDGWRSMLLESEPTEVPFFVVGNKID--- 124
Query: 217 RLPPDLQWTIATQ-ARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
+ TI+ + A+ YA A L+F SA +N++F+ + K+
Sbjct: 125 ---MKSENTISREIAQTYATRYSADLYFVSALSGQGINELFEKVAEKV 169
>gi|443716621|gb|ELU08055.1| hypothetical protein CAPTEDRAFT_163376 [Capitella teleta]
Length = 216
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
+ K+ LLG+ +GKTS + ++V N+ ++ L + +NK + + G R+ +IWD G
Sbjct: 8 TFKVVLLGEGAVGKTSLLLRFVENKFNDKHLTTLQASFLNKKMNIGGKRVNLAIWDTAGQ 67
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 68 ERFHALGPIYYRDSNGAVLVYDITDEDSFLKVKNWVKELRKMLGNEISLCIVGNKVD--- 124
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L D ++ A +YA ++ A + +SA N + ++F
Sbjct: 125 -LENDRHISV-QDAESYAASVGARHYHTSAKLNKGIEEMF 162
>gi|396081134|gb|AFN82753.1| Rab GTPase [Encephalitozoon romaleae SJ-2008]
Length = 201
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 85/171 (49%), Gaps = 11/171 (6%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+G+ +GKT +K +E Q + G++ K+L V+G ++ IWD G
Sbjct: 9 FKMILIGNSGVGKTCLMKRYTDETYSFTQSSTIGVDFKIKSLEVEGEKVKLQIWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKFDD--- 214
R + + A I+ +FD+ S+ + +++ W +E RK N+ I++G K DD
Sbjct: 69 RFRAIISNYYRGAHGIIMVFDMGSKESFDNLGDWLAEVRKNTNENVEIIILGNKVDDKEK 128
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
V +++ ++ K++ + +SA NI VN F+++ KL +
Sbjct: 129 IVVTEEEIERFLSENG-----IEKSSFYMTSAKDNICVNDSFEYLTRKLID 174
>gi|195348513|ref|XP_002040793.1| GM22359 [Drosophila sechellia]
gi|194122303|gb|EDW44346.1| GM22359 [Drosophila sechellia]
Length = 194
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 105 LLGDCQIGKTSFV------KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
+LGD +GKTS + +YV L G++ NK ++V G R+ IWD G
Sbjct: 1 MLGDSGVGKTSLLIRFRDGRYV---PSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTAGQE 57
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
R +DA A+L ++D+T++ T ++I W E R++ Q + I LIG K D
Sbjct: 58 RFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKAD 113
>gi|12311678|emb|CAC24474.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 196
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
++ K LLGD GK+S V ++V G E + G ++TL V A + F IWD G
Sbjct: 5 LNAKFVLLGDMGAGKSSLVLRFVKGQFLEFQVSTIGAAFFSQTLAVNDATVKFEIWDTAG 64
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKFDDF 215
R P+ + A A + ++D+TS + W E +K N + L G K D
Sbjct: 65 QERYHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKAD-- 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D + A +AR YA+ + LFF +SA NVN +F I +L
Sbjct: 123 ---LEDKRKVTAEEARVYAE--ENGLFFMETSAKTAANVNDVFHEIAKRL 167
>gi|291414764|ref|XP_002723624.1| PREDICTED: RAB37, member RAS oncogene family isoform 2 [Oryctolagus
cuniculus]
Length = 223
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 102 KISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ LLGD +GKT F+ + S L G++ NK + V GAR+ IWD G
Sbjct: 31 KVMLLGDSGVGKTCFLLQFRDGAFLSGTFLATVGVDFRNKVVTVDGARVKLQIWDTAGQE 90
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
R +DA A+L ++D+T++ + ++I W +E ++ Q + I L+G K D
Sbjct: 91 RFRSVTHAYYRDAQALLLLYDITNKASFDNIRAWLTEVHEYAQRDVVIMLLGNKAD 146
>gi|429964349|gb|ELA46347.1| small GTP-binding protein domain protein [Vavraia culicis
'floridensis']
Length = 202
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 97 DLVSLKISLLGDCQIGKTSFVK-YVGNEQERSL-QMAGLNLINKTLMVQGARIAFSIWDV 154
DL + KI +LG+ +GKTS + +V +E + SL G++L+ K + V + IWD
Sbjct: 6 DLTTYKIIILGESYVGKTSIARRFVNDEFDTSLFSTIGIDLLKKIVKVDDTEVKLDIWDT 65
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
G R + A I+ +FDL + + I W+ ++PI L+G K+D
Sbjct: 66 AGQERFHSITKSYYRSADGIILVFDLLDLKSFDCIDRWFEGIYTETDRSVPIFLVGNKYD 125
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRN 273
+ D + + A+ M F +SA + +N+ +F + +L RN
Sbjct: 126 E-AEHKKDFVLDVFEEK---ARNMNVEFFVTSAKNGLNIELLFSRMAEEL-------SRN 174
Query: 274 LTI-GEPIID 282
+ G PI D
Sbjct: 175 ENVLGTPIND 184
>gi|317737971|ref|NP_001188086.1| ras-related protein rab-22a [Ictalurus punctatus]
gi|308323839|gb|ADO29055.1| ras-related protein rab-22a [Ictalurus punctatus]
Length = 197
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 8/169 (4%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQ-MAGLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 5 LRELKVCLLGDTGVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 64
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDD 214
G R P+ + + A + ++D+T + ++ W E + + I + I G K D
Sbjct: 65 GQERFRALAPMYYRGSAAAIIVYDITKEESFLTLKNWVKELHQHGPSNIVVAIAGDKCD- 123
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D + + A+ YA ++ A +SA + IN+N+IF I K+
Sbjct: 124 ----VSDAREVLEKDAKDYADSIHAIFVETSAKNAININEIFTEISQKI 168
>gi|238491614|ref|XP_002377044.1| RAB GTPase Ypt5, putative [Aspergillus flavus NRRL3357]
gi|317146075|ref|XP_001821272.2| GTP-binding protein ypt5 [Aspergillus oryzae RIB40]
gi|220697457|gb|EED53798.1| RAB GTPase Ypt5, putative [Aspergillus flavus NRRL3357]
gi|391869236|gb|EIT78438.1| GTPase Rab5/YPT51 [Aspergillus oryzae 3.042]
Length = 218
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 7/188 (3%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQE--RSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
K+ LLG+ +GK+S V ++V ++ + R + L + + + F IWD G
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQ 77
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFDDFV 216
R P+ ++A + ++D+T +L+ W E R+ N+ + L G K D V
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKL-DLV 136
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNL-T 275
PD + A AYA+ F +SA + NV ++F I KL L RNL T
Sbjct: 137 TENPDKRAIPTADAEAYAREAGLLFFETSAKTSSNVRELFTAIAKKL-PLDQAGPRNLRT 195
Query: 276 IGEPIIDF 283
P +D
Sbjct: 196 NPRPGVDL 203
>gi|395328454|gb|EJF60846.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 227
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 92/186 (49%), Gaps = 12/186 (6%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFVKYVGNEQ----ERSLQMAGLNLINKTLMVQ 143
S D + +++K+ L+G+ +GK+S + +EQ + S G++ + V+
Sbjct: 1 MSQSQDKATAPINVKLLLIGNSSVGKSSLLLRFSDEQWLPEDESSATIGVDFRVHKMDVK 60
Query: 144 GARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQT 202
G ++ SIWD G R + A I+ ++D+ +R + +++ W+SE + + +
Sbjct: 61 GKKVKLSIWDTAGQERFRTITSSYYRGAQGIILVYDVANRESFDALPKWFSELETYVSSS 120
Query: 203 AIPILIGTKFD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMA 261
+ I++G K D ++ R A++ +A+A M A +SA + V + F+ ++
Sbjct: 121 VVKIIVGNKVDKEYSRQ------VSASEGQAFAARMDALFVEASAKTAVGVQEAFRDVVE 174
Query: 262 KLFNLP 267
++ + P
Sbjct: 175 RIMDTP 180
>gi|67466429|ref|XP_649362.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56465788|gb|EAL43980.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790094|dbj|BAD82843.1| small GTPase EhRabK2 [Entamoeba histolytica]
gi|449707799|gb|EMD47391.1| small GTPase EhRabK2, putative [Entamoeba histolytica KU27]
Length = 209
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 24/195 (12%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
+ I+L GD +GKT F K G + G ++I K L++ G + +WD G
Sbjct: 6 ISIALSGDAFVGKTCFFKRFSSGEFNPNTASSIGCDVICKKLILDGKQYNVQLWDTAGQE 65
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGW---YSEARKWNQTAIPILIGTKFDDF 215
++ ILFMFD+T+ + I W + E + ++ + +L+G K D
Sbjct: 66 MFRSTTATYFRNRHCILFMFDVTNSESFTHIEDWMEVFYEIQNEDKKTLLVLVGNKNDMI 125
Query: 216 V--RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL-------FNL 266
++ P+ A+ +AK+ F SA NIN++ I +F++ +L L
Sbjct: 126 AERQVSPE-------DAKDFAKSHNINYFECSAKENINIDNIIEFVIRELRLQRMLVETL 178
Query: 267 PWTVKRNLTIGEPII 281
P +++ I EPI+
Sbjct: 179 PKEIEK---IDEPIV 190
>gi|322785382|gb|EFZ12055.1| hypothetical protein SINV_03176 [Solenopsis invicta]
gi|332019048|gb|EGI59580.1| Ras-related protein Rab-39B [Acromyrmex echinatior]
Length = 218
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 7/170 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQ-GARIAFSIWDVGGD 157
++ L+GD +GK+S +KY G E S G++ + + V+ G RI +WD G
Sbjct: 10 FRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARLIEVKDGTRIKLQLWDTAGQ 69
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI--LIGTKFDDF 215
R +++V L ++D+ +R + I W EAR+ + P+ L+G K D
Sbjct: 70 ERFRSITKSYYRNSVGALLVYDVCNRASFEHIPQWMMEARRHIEPHRPVFALVGCKLD-- 127
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
+ + +ARA+A +SA +NV + F+ + +++N
Sbjct: 128 LVTNGGRREVSKEEARAFADEHGVHHIETSAKTGVNVEEAFRTVTQEVYN 177
>gi|307192501|gb|EFN75689.1| Ras-related protein Rab-39B [Harpegnathos saltator]
Length = 218
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 7/170 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQ-GARIAFSIWDVGGD 157
++ L+GD +GK+S +KY G E S G++ + + V+ G RI +WD G
Sbjct: 10 FRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARLIEVKDGTRIKLQLWDTAGQ 69
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI--LIGTKFDDF 215
R +++V L ++D+ +R + I W EAR+ + P+ L+G K D
Sbjct: 70 ERFRSITKSYYRNSVGALLVYDVCNRASFEHIPQWMMEARRHIEPHRPVFALVGCKLD-- 127
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
+ + +ARA+A +SA +NV + F+ + +++N
Sbjct: 128 LVTNGGRREVSKEEARAFADEHGVHHIETSAKTGVNVEEAFRTVTQEVYN 177
>gi|301759461|ref|XP_002915568.1| PREDICTED: ras-related protein Rab-22A-like [Ailuropoda
melanoleuca]
Length = 194
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGD 157
SLK+ L+ D +GK+S V ++V + + ++ G + + KT+ Q F IWD G
Sbjct: 5 SLKLCLIQDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQ 64
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVR 217
R P+ + + A + ++D+T T +++ W E R+ I + I D +
Sbjct: 65 ERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLI- 123
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 124 ---DVREVMERDAKDYADSIHAIFVETSAKNAININELF 159
>gi|261205984|ref|XP_002627729.1| GTP-binding protein ypt5 [Ajellomyces dermatitidis SLH14081]
gi|239592788|gb|EEQ75369.1| GTP-binding protein ypt5 [Ajellomyces dermatitidis SLH14081]
gi|327350703|gb|EGE79560.1| Ypt5 protein [Ajellomyces dermatitidis ATCC 18188]
Length = 217
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQE--RSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
K+ LLG+ +GK+S V ++V ++ + R + L + + + F IWD G
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 77
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFDDFV 216
R P+ ++A + ++D+T +L+ W E R+ N+ + L G K D V
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKL-DLV 136
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNL 274
PD + A AYA+ F +SA + NV ++F I KL L RNL
Sbjct: 137 TDSPDKRAIQTADAEAYAREAGLLFFETSAKSSTNVRELFTAIAKKL-PLDQAGPRNL 193
>gi|67526769|ref|XP_661446.1| hypothetical protein AN3842.2 [Aspergillus nidulans FGSC A4]
gi|40739917|gb|EAA59107.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259481595|tpe|CBF75261.1| TPA: RAB GTPase Ypt5, putative (AFU_orthologue; AFUA_4G08040)
[Aspergillus nidulans FGSC A4]
Length = 218
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 7/188 (3%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQE--RSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
K+ LLG+ +GK+S V ++V ++ + R + L + + + F IWD G
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQ 77
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFDDFV 216
R P+ ++A + ++D+T +L+ W E R+ N+ + L G K D V
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKL-DLV 136
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNL-T 275
PD + A AYA+ F +SA + NV ++F I KL L RN+ T
Sbjct: 137 TENPDKRAIPTADAEAYAREAGLLFFETSAKTSSNVRELFTAIAKKL-PLDQAGPRNMRT 195
Query: 276 IGEPIIDF 283
P +D
Sbjct: 196 APRPGVDL 203
>gi|194875496|ref|XP_001973609.1| GG16176 [Drosophila erecta]
gi|190655392|gb|EDV52635.1| GG16176 [Drosophila erecta]
Length = 196
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 105 LLGDCQIGKTSFV------KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
+LGD +GKTS + +YV L G++ NK ++V G R+ IWD G
Sbjct: 3 MLGDSGVGKTSLLIRFRDGRYV---PSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTAGQE 59
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
R +DA A+L ++D+T++ T ++I W E R++ Q + I LIG K D
Sbjct: 60 RFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKAD 115
>gi|395541042|ref|XP_003772457.1| PREDICTED: ras-related protein Rab-21-like, partial [Sarcophilus
harrisii]
Length = 223
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 19 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 78
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 79 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 135
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + ++ +A Y++++ A + +SA N + ++F
Sbjct: 136 -LEKERHVSV-QEAEMYSESVGAKHYHTSAKQNKGIEELF 173
>gi|255570960|ref|XP_002526431.1| protein with unknown function [Ricinus communis]
gi|223534211|gb|EEF35926.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 10/182 (5%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +TL V+G + IWD G
Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQE 72
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVR 217
R + A+ L ++D+T T ++ W E R I I LIG K D
Sbjct: 73 RYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIGNKTD---- 128
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIG 277
L+ A+ YA+ + +SA NV K F+ I+++++ + K++LT
Sbjct: 129 -LKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRI--ISKKSLTSE 185
Query: 278 EP 279
EP
Sbjct: 186 EP 187
>gi|149241639|pdb|2EQB|A Chain A, Crystal Structure Of The Rab Gtpase Sec4p, The Sec2p Gef
Domain, And Phosphate Complex
Length = 174
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 10/166 (6%)
Query: 101 LKISLLGDCQIGKTSF-VKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
+KI L+GD +GK+ V++V ++ S + G++ KT+ + G ++ +WD G
Sbjct: 8 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 67
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFDDFVR 217
R + A+ I+ ++D+T T +I W+ + N A +L+G K D R
Sbjct: 68 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETR 127
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
+ A Q A AK + SSA ++ NVN+IF F +AKL
Sbjct: 128 V------VTADQGEALAKELGIPFIESSAKNDDNVNEIF-FTLAKL 166
>gi|449438915|ref|XP_004137233.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 17/185 (9%)
Query: 90 SGYDTDSDLVSL-KISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGAR 146
+GY D D L K+ L+GD +GK++ + ++ NE S G+ +TL V G
Sbjct: 2 AGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKV 61
Query: 147 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 206
I IWD G R + AV L ++D+T T ++ W E + + I +
Sbjct: 62 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVV 121
Query: 207 -LIGTKFD--DFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMA 261
L+G K D V +P + ++YA+ + +L+F +SA +NV K F ++
Sbjct: 122 MLVGNKSDLRHLVAVPTE-------DGKSYAE--RESLYFIETSALEAVNVEKAFAEVLT 172
Query: 262 KLFNL 266
+++++
Sbjct: 173 QIYHI 177
>gi|378725883|gb|EHY52342.1| GTP-binding protein ypt5 [Exophiala dermatitidis NIH/UT8656]
Length = 219
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 6/181 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQE--RSLQMAGLNLINKTLMVQGARIAFSIWDV 154
K+ LLG+ +GK+S V ++V ++ + R + L + + + F IWD
Sbjct: 16 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDT 75
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFD 213
G R P+ ++A + ++D+T +L+ W E R+ N+ + L G K
Sbjct: 76 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKL- 134
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRN 273
D V PD + A AYAK F +SA NV ++F I KL L RN
Sbjct: 135 DLVNEHPDKRAIQTADAEAYAKEAGLLFFETSAKTATNVRELFTAIAKKL-PLDQAGPRN 193
Query: 274 L 274
L
Sbjct: 194 L 194
>gi|239611052|gb|EEQ88039.1| ypt5 protein [Ajellomyces dermatitidis ER-3]
Length = 208
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 74/178 (41%), Gaps = 9/178 (5%)
Query: 98 LVSLKISLLGDCQIGKTSFVKYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
K+ LLG+ +GK F Y R + L + + + F IWD G
Sbjct: 15 FAQFKLVLLGESAVGKDQFDDY------RESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 68
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFDDFV 216
R P+ ++A + ++D+T +L+ W E R+ N+ + L G K D V
Sbjct: 69 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKL-DLV 127
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNL 274
PD + A AYA+ F +SA + NV ++F I KL L RNL
Sbjct: 128 TDSPDKRAIQTADAEAYAREAGLLFFETSAKSSTNVRELFTAIAKKL-PLDQAGPRNL 184
>gi|195394019|ref|XP_002055643.1| GJ19473 [Drosophila virilis]
gi|194150153|gb|EDW65844.1| GJ19473 [Drosophila virilis]
Length = 201
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 7/167 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ ++GD +GK+S + ++ + G++ +T+++ G R+ IWD G
Sbjct: 9 FKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVVIDGLRVKLQIWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R + ++ ++D+T+ + ++ W E + +L+G K DD
Sbjct: 69 RFRTITSTYYRGTHGVIIVYDVTNGDSFANVRRWLEEIQNNCDVVNKVLVGNKNDD---- 124
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
PD + I A+ +A+ M LF +SA N+NV +F I ++ N
Sbjct: 125 -PDRKVVITEDAQRFARQMDIELFETSAKDNLNVEDMFLSITRQVLN 170
>gi|356569718|ref|XP_003553043.1| PREDICTED: ras-related protein RHN1-like [Glycine max]
Length = 200
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ K+ LLGD GK+S V ++V + QE ++ G ++TL V A + F IWD
Sbjct: 9 LNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTI---GAAFFSQTLAVNDATVKFEIWD 65
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKF 212
G R P+ + A A + ++D+TS + W E +K N + L G K
Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMALAGNKA 125
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D D + A +AR YA+ + LFF +SA NVN IF I +L
Sbjct: 126 D-----LEDKRKVTAEEARVYAE--ENGLFFMETSAKTASNVNDIFYEIAKRL 171
>gi|91089681|ref|XP_974614.1| PREDICTED: similar to Rab-protein 6 CG6601-PA [Tribolium castaneum]
gi|270012633|gb|EFA09081.1| hypothetical protein TcasGA2_TC006800 [Tribolium castaneum]
Length = 210
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 8/179 (4%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQ-MAGLNLINKTLMVQGA 145
FS D + L K+ LG+ +GKTS + K++ + + + Q G++ ++KT+ +
Sbjct: 4 FSISQDYNPSLQKYKLVFLGEQSVGKTSIITKFMYDSFDTAYQATVGIDFLSKTMYLTDK 63
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAI 204
+ +WD G R +P +D+ + +FD+T+ T + W ++ R + + I
Sbjct: 64 TVRLQLWDTAGQERFRSLIPAYIRDSSVAVVVFDVTNIETFHQTTKWINDVRMERGDSVI 123
Query: 205 PILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
L+G K D DL+ + AK + T +SA +N+ ++FK I L
Sbjct: 124 VFLVGNKVD-----LKDLRQVSIEEGEQKAKELNVTFVETSAKVGLNIKQLFKRITESL 177
>gi|449521271|ref|XP_004167653.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 17/185 (9%)
Query: 90 SGYDTDSDLVSL-KISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGAR 146
+GY D D L K+ L+GD +GK++ + ++ NE S G+ +TL V G
Sbjct: 2 AGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKV 61
Query: 147 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 206
I IWD G R + AV L ++D+T T ++ W E + + I +
Sbjct: 62 IKAQIWDTAGQGRYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVV 121
Query: 207 -LIGTKFD--DFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMA 261
L+G K D V +P + ++YA+ + +L+F +SA +NV K F ++
Sbjct: 122 MLVGNKSDLRHLVAVPTE-------DGKSYAE--RESLYFIETSALEAVNVEKAFAEVLT 172
Query: 262 KLFNL 266
+++++
Sbjct: 173 QIYHI 177
>gi|254583598|ref|XP_002497367.1| ZYRO0F03872p [Zygosaccharomyces rouxii]
gi|238940260|emb|CAR28434.1| ZYRO0F03872p [Zygosaccharomyces rouxii]
Length = 217
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 79 AGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNEQERS-LQMAGLNLI 136
+GL +S + +G DS +KI L+GD +GK+ V++V ++ S + G++
Sbjct: 2 SGLRTVSASSGNGKSYDS---IMKILLIGDSGVGKSCLLVRFVDDKFNPSFITTIGIDFK 58
Query: 137 NKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEA 196
KT+ + G +I +WD G R + A+ I+ ++D+T T ++I W+
Sbjct: 59 IKTVDINGKKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFSNIRQWFKTV 118
Query: 197 RKW-NQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKI 255
+ N A +L+G K D D + Q A AK + SSA ++ NVN+I
Sbjct: 119 NEHANDDAQLLLVGNKSD------MDTRTVTYEQGEALAKELGIPFIESSAKNDDNVNEI 172
Query: 256 FKFIMAKL 263
F F +AKL
Sbjct: 173 F-FTLAKL 179
>gi|224113131|ref|XP_002316401.1| predicted protein [Populus trichocarpa]
gi|118482557|gb|ABK93199.1| unknown [Populus trichocarpa]
gi|222865441|gb|EEF02572.1| predicted protein [Populus trichocarpa]
Length = 212
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 11/188 (5%)
Query: 84 LSRTFSSGYDTDSDLVSLKISLLGDCQIGKTS-FVKYVGNEQERSLQMAGLNLINKTLMV 142
++ +FS G++ D S KI L+GD +GK+S + ++ N G++ K L +
Sbjct: 1 MAGSFSKGWNNSYDY-SFKILLIGDSGVGKSSLLLSFISNSVRDLSPTIGVDFKIKVLTL 59
Query: 143 QGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVG-WYSEARKW-N 200
G R+ +IWD G R + A I+ ++D+T R T ++ W E + N
Sbjct: 60 GGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFENLSDIWAEEVELYTN 119
Query: 201 QTAIPILIGTKFDDFVRLPPDLQWTIA-TQARAYAKAMKATLFFSSATHNINVNKIFKFI 259
Q I IL+G K D D + ++ + A A+ K + SA NV + FK +
Sbjct: 120 QKCIKILVGNKVD------RDSERVVSREEGMALAQEHKCSFLECSAKTRENVLQCFKEL 173
Query: 260 MAKLFNLP 267
K+ +P
Sbjct: 174 TLKISEVP 181
>gi|147899221|ref|NP_001080535.1| RAB5A, member RAS oncogene family [Xenopus laevis]
gi|27694927|gb|AAH43866.1| Rab5a-prov protein [Xenopus laevis]
gi|76780128|gb|AAI06314.1| Rab5a-prov protein [Xenopus laevis]
Length = 216
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G + + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 8 TRPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 67
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 68 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 127
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A+AYA +SA ++NVN+IF I KL
Sbjct: 128 VIALSGNKADLSTKRAVDFQ-----EAQAYADDNSLLFMETSAKTSVNVNEIFMAIAKKL 182
>gi|453089344|gb|EMF17384.1| ras-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 225
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 5/170 (2%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWDV 154
K+ LLG+ +GK+S V ++V ++ R + L + + + F IWD
Sbjct: 17 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDEQTTVKFEIWDT 76
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFD 213
G R P+ ++A + ++D+T +L+ W E R+ N+ I L G K
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGNKA- 135
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D V PD + A AYAK F +SA NV ++F I KL
Sbjct: 136 DLVAEQPDKRAVSTADAEAYAKEANLLFFETSAKTAENVKELFTAIAKKL 185
>gi|195438709|ref|XP_002067275.1| GK16335 [Drosophila willistoni]
gi|194163360|gb|EDW78261.1| GK16335 [Drosophila willistoni]
Length = 200
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 7/167 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ ++GD +GK+S + ++ + G++ +T+++ G R+ IWD G
Sbjct: 9 FKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVVIDGLRVKLQIWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R + ++ ++D+T+ + ++ W E + +L+G K DD
Sbjct: 69 RFRTITSTYYRGTHGVIIVYDVTNGDSFANVRRWLEEIQNNCDVVNKVLVGNKNDD---- 124
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
PD + I A+ +A+ M L+ +SA NINV +F I ++ N
Sbjct: 125 -PDRKVVITEDAQRFARQMDIELYETSAKDNINVEDMFLSITRQVLN 170
>gi|225441147|ref|XP_002267276.1| PREDICTED: ras-related protein RABC2a [Vitis vinifera]
gi|297739985|emb|CBI30167.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 11/185 (5%)
Query: 99 VSLKISLLGDCQIGKTS-FVKYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
+S KI L+GD +GK+S V ++ + E G++ K L V G R+ +IWD G
Sbjct: 13 LSFKILLIGDSAVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKLTIWDTAGQ 72
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVG-WYSEARKW--NQTAIPILIGTKFDD 214
R + A I+ ++D+T R + ++ W E + NQ + +L+G K D
Sbjct: 73 ERFRTLTSSYYRGAQGIILVYDVTRRESFTNLSDVWAKEVELYSTNQDCVKMLVGNKVDR 132
Query: 215 FVRLPPDLQWTIA-TQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRN 273
+ + ++ + A AK F SA NV K F+ + K+ +P ++
Sbjct: 133 ------ESERVVSREEGIALAKEHGCLFFECSAKTRENVEKCFEELALKIMEVPSLLEEG 186
Query: 274 LTIGE 278
T+G+
Sbjct: 187 STVGK 191
>gi|123495541|ref|XP_001326768.1| Ras family protein [Trichomonas vaginalis G3]
gi|62736326|gb|AAX97492.1| small Rab GTPase RabX17 [Trichomonas vaginalis]
gi|121909687|gb|EAY14545.1| Ras family protein [Trichomonas vaginalis G3]
Length = 211
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 8/162 (4%)
Query: 96 SDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWD 153
S+ V+LK LLG+ ++GKTS +YV G+ + + NK L V +++ F IWD
Sbjct: 10 SNSVTLKAVLLGESKVGKTSLCSRYVSGDWDSNTAATISASCFNKDLTVDDSKVKFYIWD 69
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPIL-IGTKF 212
G + PI + A + +FDLT+ T++ W +E R IP++ IG K
Sbjct: 70 TAGQEQFRSISPIYYRSAHVAIIVFDLTAIPTIDVANFWVNELRNNGPAGIPLIAIGNKS 129
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNK 254
D +R+ L+ ARA+A + A F SA NV++
Sbjct: 130 D--LRM---LRMIQNADARAFADNIGALYFECSALSGDNVDE 166
>gi|366990901|ref|XP_003675218.1| hypothetical protein NCAS_0B07630 [Naumovozyma castellii CBS 4309]
gi|342301082|emb|CCC68847.1| hypothetical protein NCAS_0B07630 [Naumovozyma castellii CBS 4309]
Length = 216
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 15/179 (8%)
Query: 98 LVSLKISLLGDCQIGKTS----FVKYVGNEQERSLQMAGLNLINKTLMVQGAR------I 147
++ K+ LLGD +GK+S FVK +E S G +++T+ ++ I
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVHRFVKDSFDELRES--TIGAAFLSQTIKIKAEEQEEDVVI 58
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK--WNQTAIP 205
F IWD G R P+ ++A A L ++DLT + +L W E + ++ +
Sbjct: 59 KFEIWDTAGQERYKSLAPMYYRNANAALVVYDLTQKDSLVKARSWVEELKNKVGDEDLVI 118
Query: 206 ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
L+G K D DL+ ++A+AYA+ SA V ++F+ I KL+
Sbjct: 119 FLVGNKL-DLCEGEEDLRAVDTSEAKAYAEEQNLLFTEVSAKTGQGVKEVFRSIGEKLY 176
>gi|242038603|ref|XP_002466696.1| hypothetical protein SORBIDRAFT_01g012480 [Sorghum bicolor]
gi|241920550|gb|EER93694.1| hypothetical protein SORBIDRAFT_01g012480 [Sorghum bicolor]
Length = 203
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 18/171 (10%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
K+ LLGD GK+S V ++V + QE ++ G ++TL V + F IWD G
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTI---GAAFFSQTLAVNDETVKFEIWDTAG 69
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFDDF 215
R P+ + A A + ++D+T+ + W E + + N I L G K D
Sbjct: 70 QERYHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNPNTIVALAGNKADML 129
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKLF 264
D + A +A+ YA+ + LFF +SA INVN IF I +L
Sbjct: 130 -----DARQVPAEEAKTYAQ--ENGLFFMETSAKSAINVNDIFYEIAKRLL 173
>gi|12083645|ref|NP_073183.1| ras-related protein Rab-5A [Rattus norvegicus]
gi|3309068|gb|AAC26004.1| small GTP-binding protein rab5 [Rattus norvegicus]
gi|149027113|gb|EDL82849.1| RAB5A, member RAS oncogene family [Rattus norvegicus]
gi|171847366|gb|AAI61848.1| Rab5a protein [Rattus norvegicus]
Length = 215
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G +T + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFSRAKNWVKELQRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|47212281|emb|CAF89513.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 8/176 (4%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 12 SFKAVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNITGKRVNLAIWDTAGQ 71
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 72 ERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNDICLCIVGNKID--- 128
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKR 272
L D ++ +A +YA+++ A + +SA N + ++F + ++ +R
Sbjct: 129 -LDKDRHVSV-EEAESYAESVGARHYHTSAKLNKGIEELFLDLCKRMMETAQAEER 182
>gi|402083928|gb|EJT78946.1| GTP-binding protein ypt5 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 221
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 5/170 (2%)
Query: 98 LVSLKISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMV-QGARIAFSIWDV 154
K+ LLG+ +GK+S V +Q S + + G + +T+ + + + F IWD
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDT 76
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFD 213
G R P+ ++A + ++D+T +L+ W E R+ N+ I L G K
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKL- 135
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D V PD + A AYA+ F +SA NV ++F I KL
Sbjct: 136 DLVTEQPDKRAVSTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKL 185
>gi|441639329|ref|XP_003277577.2| PREDICTED: ras-related protein Rab-22A [Nomascus leucogenys]
Length = 250
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 6/156 (3%)
Query: 103 ISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDSRS 160
+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD G R
Sbjct: 64 LCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERF 123
Query: 161 FDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPP 220
P+ + + A + ++D+T T +++ W E R+ I + I D +
Sbjct: 124 RALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLI---- 179
Query: 221 DLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 180 DVREVMERDAKDYADSIHAIFVETSAKNAININELF 215
>gi|406864129|gb|EKD17175.1| Rab5-like protein ypt5 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 220
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 5/170 (2%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQE--RSLQMAGLNLINKTLMVQGARIAFSIWDV 154
K+ LLG+ +GK+S V ++V ++ + R + L + + F IWD
Sbjct: 17 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDFRESTIGAAFLTQTISLDDNTTVKFEIWDT 76
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFD 213
G R P+ ++A + ++D+T +L+ W E R+ N+ I L G K
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKQWVKELQRQANENIIIALAGNKL- 135
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D V PD + A AYAK F +SA + NV ++F I KL
Sbjct: 136 DLVTAQPDKRAITTADAEAYAKEAGLLFFETSAKTSENVRELFTSIAKKL 185
>gi|12311680|emb|CAC24475.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 196
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ K LLGD GK+S V ++V + QE ++ G ++TL V A + F IWD
Sbjct: 5 LNAKFVLLGDMGAGKSSLVLRFVKGQFLEFQESTI---GAAFFSQTLAVNDATVKFEIWD 61
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKF 212
G R P+ + A A + ++D+TS + W E +K N + L G K
Sbjct: 62 TAGQERYHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKA 121
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D D + A +AR YA+ + LFF +SA NVN +F I +L
Sbjct: 122 D-----LEDKREVTAEEARVYAE--ENGLFFMETSAKTAANVNDVFHEIAKRL 167
>gi|383857603|ref|XP_003704294.1| PREDICTED: ras-related protein RabJ-like [Megachile rotundata]
Length = 217
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 8/182 (4%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVG 155
+V K+ LG +GKTS + +YVG E G + L V+ +I +WD
Sbjct: 3 IVEGKVVALGSQGVGKTSMIIRYVGKAFNEHVDPTIGASFFTCKLNVENVKIMLQVWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDD 214
G R P+ ++A A + +FDLT T ++ GW +E R+ + A+ + +IG K D
Sbjct: 63 GQERFRSMAPMYYRNANAAMLVFDLTQYNTFAAMKGWVTELRRNVEDAMVLAVIGNKSDL 122
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNL 274
D A + R YA + A+ +S + + +F I L L T + ++
Sbjct: 123 IKERQVD-----AEEGRVYATNIGASYHETSVLQDEGIENVFLDIGMGLLRLASTEQDSM 177
Query: 275 TI 276
+I
Sbjct: 178 SI 179
>gi|367051801|ref|XP_003656279.1| hypothetical protein THITE_2069455 [Thielavia terrestris NRRL 8126]
gi|347003544|gb|AEO69943.1| hypothetical protein THITE_2069455 [Thielavia terrestris NRRL 8126]
Length = 219
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 5/173 (2%)
Query: 95 DSDLVSLKISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMV-QGARIAFSI 151
++ K+ LLG+ +GK+S V +Q S + + G + +T+ + + + F I
Sbjct: 13 NTRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEI 72
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGT 210
WD G R P+ ++A + ++D+T +L+ W E R+ N+ I L G
Sbjct: 73 WDTAGQERYKSLAPMYYRNANCAVVVYDITQATSLDKAKSWVKELQRQANENIIIALAGN 132
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
K D V PD + A AYA+ F +SA NV ++F I KL
Sbjct: 133 KL-DLVAEQPDKRAVQTADAEAYAREAGLLFFETSAKTAENVQELFTAIAKKL 184
>gi|354476585|ref|XP_003500505.1| PREDICTED: ras-related protein Rab-5A-like [Cricetulus griseus]
gi|344240325|gb|EGV96428.1| Ras-related protein Rab-5A [Cricetulus griseus]
Length = 215
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G +T + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSVNVNEIFMAIAKKL 181
>gi|170044398|ref|XP_001849836.1| ras-related protein Rab-39B [Culex quinquefasciatus]
gi|167867568|gb|EDS30951.1| ras-related protein Rab-39B [Culex quinquefasciatus]
Length = 219
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
Query: 105 LLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQ-GARIAFSIWDVGGDSRSF 161
L+GD +GK+S +KY G E S G++ + V+ G RI +WD G R
Sbjct: 14 LIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFAHLIEVKDGTRIKLQLWDTAGQERFR 73
Query: 162 DHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI--LIGTKFDDFVRLP 219
+++V +L ++D+T+ + I W EA++ + P+ L+G K D V
Sbjct: 74 SITKSYYRNSVGVLLVYDITNHASFEHIPLWMMEAKRHIEPHRPVFALVGCKL-DLVNNG 132
Query: 220 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
+ +AR++A+ +SA +NV + F + +++N
Sbjct: 133 VQRREVSVEEARSFAEQHGLIFVETSARTGVNVREAFSLVTQEVYN 178
>gi|383861916|ref|XP_003706430.1| PREDICTED: ras-related protein Rab-39B-like [Megachile rotundata]
Length = 218
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 7/170 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQ-GARIAFSIWDVGGD 157
++ L+GD +GK+S ++Y G E S G++ + + V+ G RI +WD G
Sbjct: 10 FRLILIGDSTVGKSSLLRYFTDGKFAELSDPTVGVDFFARLIEVKDGTRIKLQLWDTAGQ 69
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI--LIGTKFDDF 215
R +++V L ++D+ +R + I W EAR+ + P+ L+G K D
Sbjct: 70 ERFRSITKSYYRNSVGALLVYDVCNRASFEHIPQWMMEARRHIEPHRPVFALVGCKLD-- 127
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
+ + +ARA+A +SA INV + F+ + +++N
Sbjct: 128 LVTNGGRREVSKEEARAFADQHGVHHIETSAKTGINVEETFRTVTQEVYN 177
>gi|56118785|ref|NP_991282.2| ras-related protein Rab-22A [Danio rerio]
gi|55250250|gb|AAH85393.1| RAB22A, member RAS oncogene family [Danio rerio]
gi|182889502|gb|AAI65262.1| Rab22a protein [Danio rerio]
Length = 196
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 8/169 (4%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDD 214
G R P+ + + A + ++D+T + ++ W E R+ I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAIAGNKCD- 121
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D + A+ YA ++ A +SA + IN+N++F I ++
Sbjct: 122 ----LSDAREVSEKDAKDYADSIHAIFIETSAKNAININEVFTQISERI 166
>gi|432867924|ref|XP_004071340.1| PREDICTED: ras-related protein Rab-5C-like [Oryzias latipes]
Length = 218
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 8/178 (4%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGAR 146
++G + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 10 TNGTAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTT 69
Query: 147 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 206
+ F IWD G R P+ + A A + +FD+T+ T W E ++ I I
Sbjct: 70 VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITNTDTFTRAKNWVKELQRQASPNIVI 129
Query: 207 -LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
L G K D + D Q +A+AYA +SA +NVN+IF I KL
Sbjct: 130 ALAGNKADLTNKRNVDFQ-----EAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|156391919|ref|XP_001635797.1| predicted protein [Nematostella vectensis]
gi|156222894|gb|EDO43734.1| predicted protein [Nematostella vectensis]
Length = 222
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 10/161 (6%)
Query: 99 VSLKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
S+K+ LGD +GK+ V+ + + + L L L + V I WD G
Sbjct: 23 TSVKVICLGDSAVGKSKLVERFLMDGYKPQQLSTYALTLFHYETKVDDKDIRVDFWDTAG 82
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
R P A A L +FD+T + T ++ WY E RK+ + I++ K
Sbjct: 83 QERFSSMHPSYYHQAHACLLVFDITRKITYKNLANWYKELRKYRDSIPCIVVANKI---- 138
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 257
D+ + + ++ + K +F SA+ NV K+F+
Sbjct: 139 ----DVDYKVTQKSFNFPKKYGLPFYFVSASDGTNVVKVFR 175
>gi|37681919|gb|AAQ97837.1| RAB22A, member RAS oncogene family [Danio rerio]
Length = 196
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 8/169 (4%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDD 214
G R P+ + + A + ++D+T + ++ W E R+ I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAIAGNKCD- 121
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D + A+ YA ++ A +SA + IN+N++F I ++
Sbjct: 122 ----LSDAREVSEKDAKDYADSIHAIFIETSAKNAININEVFTQISERI 166
>gi|449268714|gb|EMC79563.1| Ras-related protein Rab-17 [Columba livia]
Length = 214
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 10/167 (5%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRS 160
K+ LLG+ +GK+S +YV N+ + SL G + +TL ++ A + F IWD G +
Sbjct: 21 KVVLLGNTSVGKSSLAYRYVKNDFKESLPTVGCSFFTQTLNLEVATVRFEIWDTAGQEKY 80
Query: 161 FDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK--WNQTAIPILIGTKFDDFVRL 218
+ + A A L ++D+T++ TLN W ++ K + L+G K D +
Sbjct: 81 HSVCHLYYRGAHAALLVYDITNKETLNRAKLWLTDLEKEFLPDEIVIALVGNKTDLAAK- 139
Query: 219 PPDLQWTIATQARAYAKAMKATLFF-SSATHNINVNKIFKFIMAKLF 264
+AT+ K LF +SA N VN IF I +L
Sbjct: 140 -----REVATEEGEEFARTKGLLFMETSAKSNHQVNDIFMAIAQELL 181
>gi|429852674|gb|ELA27799.1| rab GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 221
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 5/173 (2%)
Query: 95 DSDLVSLKISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMV-QGARIAFSI 151
++ K+ LLG+ +GK+S V +Q S + + G + +T+ + + + F I
Sbjct: 15 NTRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEI 74
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGT 210
WD G R P+ ++A + ++D+T +L+ W E R+ N+ I L G
Sbjct: 75 WDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGN 134
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
K D V PD + A AYA+ F +SA NV +F I KL
Sbjct: 135 KL-DLVNEQPDKRAVSTADAEAYAREAGLLFFETSAKTAENVKDLFTAIAKKL 186
>gi|225556792|gb|EEH05080.1| GTP-binding protein ypt5 [Ajellomyces capsulatus G186AR]
gi|240281654|gb|EER45157.1| GTP-binding protein [Ajellomyces capsulatus H143]
gi|325087805|gb|EGC41115.1| GTP-binding protein ypt5 [Ajellomyces capsulatus H88]
Length = 217
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQE--RSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
K+ LLG+ +GK+S V ++V ++ + R + L + + + F IWD G
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 77
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFDDFV 216
R P+ ++A + ++D+T +L+ W E R+ N+ + L G K D V
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKL-DLV 136
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNL 274
PD + A AYA+ F +SA + NV ++F I KL L RNL
Sbjct: 137 TDSPDKRAIQTVDAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKL-PLDQAGPRNL 193
>gi|73965070|ref|XP_540417.2| PREDICTED: ras-related protein Rab-37 [Canis lupus familiaris]
Length = 223
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 9/147 (6%)
Query: 71 SPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERS--- 127
S A T + E S S YD V+ K+ LLGD +GKT F+ + S
Sbjct: 5 SGAAATRDGEAPEHSPPCSPSYD-----VTGKVMLLGDSGVGKTCFLIQFKDGAFLSGNF 59
Query: 128 LQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLN 187
+ G++ NK + V G R+ IWD G R +DA A+L ++D+T++ + +
Sbjct: 60 IATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFD 119
Query: 188 SIVGWYSEARKWNQTAIPI-LIGTKFD 213
+I W +E ++ Q + I L+G K D
Sbjct: 120 NIRAWLTEIHEYAQRDVVIMLLGNKAD 146
>gi|348509081|ref|XP_003442080.1| PREDICTED: ras-related protein Rab-5C-like [Oreochromis niloticus]
Length = 220
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 8/178 (4%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGAR 146
++G S + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 10 TNGTAASSKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTT 69
Query: 147 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 206
+ F IWD G R P+ + A A + ++D+T+ T W E ++ I I
Sbjct: 70 VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVI 129
Query: 207 LI-GTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I G K D + D Q +A+AYA +SA +NVN+IF I KL
Sbjct: 130 AIAGNKADLANKRAVDFQ-----EAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|356505277|ref|XP_003521418.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 211
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 11/182 (6%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
+S KI L+GD +GK+S V ++ + E G++ KTL V G R+ +IWD G
Sbjct: 13 LSFKILLIGDSGVGKSSLLVSFISSSVEDLSPTIGVDFKIKTLTVGGKRLKLTIWDTAGQ 72
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVG-WYSEARKW--NQTAIPILIGTKFDD 214
R + A I+ ++D+T R T ++ W E + NQ + IL+G K D
Sbjct: 73 ERFRTLNSSYYRKAQGIILVYDVTRRETFTNLSEVWSKEVELYSTNQDCVKILVGNKVD- 131
Query: 215 FVRLPPDLQWTIA-TQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRN 273
D + ++ + A AK + L SA NV + F+ + K+ P ++
Sbjct: 132 -----RDTERAVSREEGLALAKELGCLLLECSAKTRENVEQCFEELALKIMEAPSLLEEG 186
Query: 274 LT 275
T
Sbjct: 187 ST 188
>gi|387017940|gb|AFJ51088.1| ras-related protein Rab-5A-like [Crotalus adamanteus]
Length = 215
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 9/198 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G + + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 7 TRPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
I F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTIKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALAGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSVNVNEIFMAIAKKL 181
Query: 264 -FNLPWTVKRNLTIGEPI 280
N P N + G +
Sbjct: 182 PKNEPQNTGANSSRGRGV 199
>gi|123490680|ref|XP_001325660.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121908563|gb|EAY13437.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 194
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 102 KISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMVQGARIAFSIWDVGGDSR 159
K+ +LGD +GKT V ++ N+Q M+ G++ T+ + + S+WD G
Sbjct: 13 KVPVLGDAAVGKTCIVDWIHNKQFNPATMSNVGVSTTQVTIKLDDKEVPLSLWDTAGQET 72
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVRL 218
VP+ ++A IL +FD++ R + ++VGW + R P+ L+ K D +
Sbjct: 73 YRSLVPLYTRNAEVILLVFDISERKSFRNLVGWMNYIRNDLAATCPVMLVCNKIDRDGGV 132
Query: 219 P-PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 259
P P++ R +A++ T+ ++SA + ++F +
Sbjct: 133 PRPEI--------REFAESNSLTVNYTSAVTGQGIEELFNEV 166
>gi|297800092|ref|XP_002867930.1| hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp.
lyrata]
gi|297313766|gb|EFH44189.1| hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp.
lyrata]
Length = 200
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 18/173 (10%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ K+ LLGD GK+S V ++V ++ QE ++ G ++TL V A + F IWD
Sbjct: 9 INAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTI---GAAFFSQTLAVNDATVKFEIWD 65
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKF 212
G R P+ + A A + +FD+T++ + W E + + N + L G K
Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKS 125
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D D + A +A+ YA+ + LFF +SA NV +IF I +L
Sbjct: 126 DLL-----DARKVTAEEAQTYAQ--ENGLFFMETSAKTATNVKEIFYEIARRL 171
>gi|262401089|gb|ACY66447.1| putative ras-related protein Rab [Scylla paramamosain]
Length = 197
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 101 LKISLLGDCQIGKTSFV------KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDV 154
K+ ++GD +GK+S + + GN + G++ +TL V G R+ IWD
Sbjct: 5 FKLLIIGDSGVGKSSLLLRFADNTFTGN----YITTIGVDFKIRTLEVDGERVKLQIWDT 60
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDD 214
G R + ++ ++D+T+ + ++ W E + + IL+G K D
Sbjct: 61 AGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVKRWLHEIEQNCEVVNRILVGNKND- 119
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
PD + + A+ +A M +LF +SA NINV ++F +M K+
Sbjct: 120 ----CPDRKVVLYEDAKRFADQMTISLFETSAKDNINVEEMFT-VMTKM 163
>gi|134105123|pdb|2OCY|C Chain C, Complex Of The Guanine Exchange Factor Sec2p And The Rab
Gtpase Sec4p
Length = 170
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 10/165 (6%)
Query: 102 KISLLGDCQIGKTSF-VKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
KI L+GD +GK+ V++V ++ S + G++ KT+ + G ++ +WD G R
Sbjct: 5 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 64
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFDDFVRL 218
+ A I+ ++D+T T +I W+ + N A +L+G K D R+
Sbjct: 65 FRTITTAYYRGAXGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDXETRV 124
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
A Q A AK + SSA ++ NVN+IF F +AKL
Sbjct: 125 ------VTADQGEALAKELGIPFIESSAKNDDNVNEIF-FTLAKL 162
>gi|331234359|ref|XP_003329839.1| hypothetical protein PGTG_11776 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309308829|gb|EFP85420.1| hypothetical protein PGTG_11776 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 236
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 14/174 (8%)
Query: 100 SLKISLLGDCQIGKTS----FVKYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVG 155
+LK+ L+G +GK+S F V E S G++ K + +G R SIWD
Sbjct: 30 TLKLLLIGSSSVGKSSLLLRFTDQVFLSAEESSATIGVDFKFKLIDHKGKRYKLSIWDTA 89
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWN---QTAIPILIGTKF 212
G R + A +L ++D+T+R + S+ W+SE + Q + +++G K
Sbjct: 90 GQERFRTLTSSYYRGAQGVLLVYDVTNRASFESLPSWFSELDTFAHSPQDVVRVIVGNKV 149
Query: 213 DDFVRLPPDLQWTIAT-QARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
D D T++T + RA+A A F +S V+++F+ ++ K+ +
Sbjct: 150 D------KDESRTVSTDEGRAFASDNHAMFFETSVKTRKGVDEVFEAVVDKIID 197
>gi|212275548|ref|NP_001130433.1| uncharacterized protein LOC100191530 [Zea mays]
gi|194689106|gb|ACF78637.1| unknown [Zea mays]
gi|414869113|tpg|DAA47670.1| TPA: ras protein RHN1 [Zea mays]
Length = 204
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 18/171 (10%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
K+ LLGD GK+S V ++V + QE ++ G ++TL V + F IWD G
Sbjct: 14 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTI---GAAFFSQTLAVNDETVKFEIWDTAG 70
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFDDF 215
R P+ + A A + ++D+T+ + W E + + N I L G K D
Sbjct: 71 QERYHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNSNTIVALAGNKADLL 130
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKLF 264
D + A +A+AYA+ + LFF +SA NVN +F I KL
Sbjct: 131 -----DTRQVSADEAKAYAQ--ENGLFFMETSAKTATNVNDVFYEIAKKLL 174
>gi|156035889|ref|XP_001586056.1| hypothetical protein SS1G_13149 [Sclerotinia sclerotiorum 1980]
gi|154698553|gb|EDN98291.1| hypothetical protein SS1G_13149 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 221
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 6/189 (3%)
Query: 95 DSDLVSLKISLLGDCQIGKTSFV-KYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSI 151
+S K+ LLG+ +GK+S V ++V ++ R + L + + + F I
Sbjct: 13 NSRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEI 72
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGT 210
WD G R P+ ++A + ++D+T +L+ W E R+ N+ I L G
Sbjct: 73 WDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGN 132
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTV 270
K D V PD + A YA+ F +SA + NV ++F I KL L
Sbjct: 133 KL-DLVTEQPDKRAITTEDASNYAREAGLLFFETSAKTSENVRELFTAIAKKL-PLDQAG 190
Query: 271 KRNLTIGEP 279
RN G P
Sbjct: 191 PRNPRAGGP 199
>gi|385303401|gb|EIF47476.1| putative rab family gtp-binding protein [Dekkera bruxellensis
AWRI1499]
Length = 217
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 16/194 (8%)
Query: 96 SDLVSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ +S+K+ LLG+ +GK+S V ++V N+ +E G + + ++ I F IWD
Sbjct: 6 NNQISVKLVLLGEAAVGKSSLVLRFVSNDFEENKEPTIGAAFLTQRCIIGDKNIKFEIWD 65
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCT-LNSIVGWYSEARKWNQTAIPI-LIGTK 211
G R + P+ ++A A L ++D+T + L+ W E + I I L+G K
Sbjct: 66 TAGQERFANLTPLYYRNAQAALVVYDVTKPSSFLSXQRHWVKELHEQASKNIVIALVGNK 125
Query: 212 FDDFVRLPPDLQWTIA-------TQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
FD + L P+ I + + A+ F +SA +NVNK+F I K
Sbjct: 126 FD--LILDPESGEEIEGARKVSIDEGKXLAEEENLLFFETSAKTGLNVNKVFTTIGEK-- 181
Query: 265 NLPWTVKRNLTIGE 278
+P T K+ E
Sbjct: 182 -IPDTXKQXXNXDE 194
>gi|149634147|ref|XP_001508982.1| PREDICTED: ras-related protein Rab-5A-like [Ornithorhynchus
anatinus]
Length = 215
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G +T + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALAGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|395540249|ref|XP_003772070.1| PREDICTED: ras-related protein Rab-5A [Sarcophilus harrisii]
Length = 215
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G +T + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALAGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|226291514|gb|EEH46942.1| GTP-binding protein ypt5 [Paracoccidioides brasiliensis Pb18]
Length = 217
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 5/167 (2%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQE--RSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
K+ LLG+ +GK+S V ++V ++ + R + L + + + F IWD G
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQ 77
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFDDFV 216
R P+ ++A + ++D+T +L+ W E R+ N+ I L G K D V
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGNKL-DLV 136
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
PD + A AYA+ F +SA NV ++F I KL
Sbjct: 137 MDSPDKRAIQTADAEAYAREAGLLFFETSAKSATNVRELFTAIAKKL 183
>gi|213514424|ref|NP_001134194.1| Ras-related protein Rab-22A [Salmo salar]
gi|209731382|gb|ACI66560.1| Ras-related protein Rab-22A [Salmo salar]
Length = 195
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDNFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDD 214
G R P+ + + A + ++D+T + ++ W E R+ I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEDSFQTLKNWVKELRQHGPPNIVVAIAGNKCD- 121
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
D + A+ YA ++ A +SA + IN+N++F
Sbjct: 122 ----LSDAREVSEKDAKDYADSIHAIFVETSAKNAININEVF 159
>gi|357612151|gb|EHJ67842.1| Ras-related small GTPase [Danaus plexippus]
Length = 208
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
+ K+ LLG+ +GKTS + +Y+ ++ ++ L +NK L + G RI SIWD G
Sbjct: 10 NFKVVLLGEGCVGKTSLLLRYIEDKYNDKHLTTLQATFLNKKLNINGKRINLSIWDTAGQ 69
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDFV 216
+ PI +++ + ++D+T + + W E RK + I ++I G K D
Sbjct: 70 EKFHALGPIYYRNSNGAILVYDITDEDSFGKVKNWVKELRKMLGSDIVLVIAGNKID--- 126
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L D + +A +YA + A F +SA N V ++F
Sbjct: 127 -LEQDRTVPLE-EAESYAVMVGARHFNTSAKMNQGVEELF 164
>gi|440470816|gb|ELQ39867.1| mitochondrion protein [Magnaporthe oryzae Y34]
gi|440482453|gb|ELQ62942.1| mitochondrion protein [Magnaporthe oryzae P131]
Length = 932
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 8/170 (4%)
Query: 95 DSDLVSLKISLLGDCQIGKTSFVKYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDV 154
++ K+ LLG+ +GK F Y R + L + + + F IWD
Sbjct: 14 NNRFAQFKLVLLGESAVGKDQFDSY------RESTIGAAFLTQTISLDENTTVKFEIWDT 67
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFD 213
G R P+ ++A + ++D+T +L+ W E R+ N+ I L G K
Sbjct: 68 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKL- 126
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D V PD + ++A AYA+ F +SA NV +F I KL
Sbjct: 127 DLVTEQPDKRAVPTSEAEAYAREAGLLFFETSAKTAENVRDLFTAIAKKL 176
>gi|123500553|ref|XP_001327882.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121910818|gb|EAY15659.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 196
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 101 LKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
+KI LLGD +GKTS ++ VGN G + +V+G + +F IWD G
Sbjct: 8 IKIVLLGDQAVGKTSLLQKWVVGNYDVNLPPTVGGATQIRQDVVEGVKYSFQIWDTAGAE 67
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R P+ +DA A + +FDLTS+ ++++I W + ++P +I +D V
Sbjct: 68 RYRALTPLYTRDAAAAMIVFDLTSQTSVDNIKQWVEFVHQ--HGSMPFIIVGNKEDLV-- 123
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 257
D Q +A A ++++ F +SA NV+ F+
Sbjct: 124 --DEQIITPEEALELAFSVQSQFFATSAKTGNNVDLAFR 160
>gi|12311682|emb|CAC24476.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ K LLGD GK+S V ++V + QE ++ G ++TL V A + F IWD
Sbjct: 9 LNAKFVLLGDMGAGKSSLVLRFVKGQFLEFQESTI---GAAFFSQTLAVNDATVKFEIWD 65
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKF 212
G R P+ + A A + ++D+TS + W E +K N + L G K
Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKA 125
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D D + A +AR YA+ + LFF +SA NVN +F I +L
Sbjct: 126 D-----LEDKRKVTAEEARVYAE--ENGLFFMETSAKTAANVNDVFHEIAKRL 171
>gi|1370172|emb|CAA98163.1| RAB1X [Lotus japonicus]
Length = 208
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 23/198 (11%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTS-FVKYVGNEQERSLQMAGLNLINKTLMVQGARI 147
S GYD +S KI L+GD +GK+S V ++ + E G++ K L V G R+
Sbjct: 5 SGGYD-----LSFKILLIGDSGVGKSSLLVSFISSSVEDQSPTIGVDFKIKMLTVGGKRL 59
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVG-WYSEARKW--NQTAI 204
++WD G R + A I+ ++D+T R T ++ W E + NQ +
Sbjct: 60 KLTLWDTAGQERFRTLTSSYYRGAQGIILVYDVTKRETFTNLSEVWSKELELYSNNQDCV 119
Query: 205 PILIGTKFD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
+L+G K D D R + A AK + L SA NV + F+ + K+
Sbjct: 120 KMLVGNKVDRDAARAVS------REEGLALAKELGCLLIECSAKTRENVEQCFEELALKI 173
Query: 264 FNLP-------WTVKRNL 274
P VKRN+
Sbjct: 174 MEAPSLLEEGSTAVKRNI 191
>gi|409082156|gb|EKM82514.1| hypothetical protein AGABI1DRAFT_111121 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426199982|gb|EKV49906.1| GTP binding protein [Agaricus bisporus var. bisporus H97]
Length = 214
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 15/186 (8%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDSR 159
KI LLGD +GKTS + +++ + + + Q G++ ++KT+ ++ + +WD G R
Sbjct: 22 KIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 81
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFDDFVRL 218
+P +D+ + +FD+T+R + S W + R + I +L+G K D L
Sbjct: 82 FRSLIPSYIRDSSVAIVVFDITNRQSFMSTTKWIEDVRSERGNDVIIVLVGNKAD----L 137
Query: 219 PPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
Q T+ A AKA + + F +SA NV +FK I +LP K N +
Sbjct: 138 SDKRQVTL---EEATAKATQLNIMFMETSAKAGHNVKGLFKKIA---MSLPGMEKENQSD 191
Query: 277 GEPIID 282
ID
Sbjct: 192 TNTKID 197
>gi|198424649|ref|XP_002130574.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 208
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 14/166 (8%)
Query: 96 SDLVSLKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWD 153
D+ LKI LGD +GK+ V+ V + + L L N + G +I+ WD
Sbjct: 10 EDVEKLKIICLGDSAVGKSKLVERFLVDGYKPQQQSTYALTLFNYETKLNGKKISVDFWD 69
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFD 213
G R P A A + +FD T + T ++ WY E R++ +L+ K D
Sbjct: 70 TAGQERFSSMHPSYYHQAQACILVFDATRKVTYKNLNNWYKELRQYRPNIPCLLVANKID 129
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATL--FFSSATHNINVNKIFK 257
+ R +A K L +F SA + NV K+F+
Sbjct: 130 ----------VDLGVTKRTFAFGTKHNLPQYFVSAANGTNVVKVFR 165
>gi|348558194|ref|XP_003464903.1| PREDICTED: ras-related protein Rab-37-like [Cavia porcellus]
Length = 273
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 102 KISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ LLGD +GKT F+ + S + G++ NK + V GAR+ IWD G
Sbjct: 32 KVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGARVKLQIWDTAGQE 91
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
R +DA A+L ++D+T++ + ++I W +E ++ Q + I L+G K D
Sbjct: 92 RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIVLLGNKAD 147
>gi|295668134|ref|XP_002794616.1| GTP-binding protein ypt5 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286032|gb|EEH41598.1| GTP-binding protein ypt5 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 214
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 5/167 (2%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQE--RSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
K+ LLG+ +GK+S V ++V ++ + R + L + + + F IWD G
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQ 77
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFDDFV 216
R P+ ++A + ++D+T +L+ W E R+ N+ I L G K D V
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQVSSLDKAKSWVKELQRQANENIIIALAGNKL-DLV 136
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
PD + A AYA+ F +SA NV ++F I KL
Sbjct: 137 MDSPDKRAIQTADAEAYAREAGLLFFETSAKSATNVRELFTAIAKKL 183
>gi|225466271|ref|XP_002272169.1| PREDICTED: ras-related protein Rab5 [Vitis vinifera]
gi|147795279|emb|CAN67253.1| hypothetical protein VITISV_014431 [Vitis vinifera]
Length = 200
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ K+ LLGD GK+S V ++V + QE ++ G ++TL V A + F IWD
Sbjct: 9 LNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTI---GAAFFSQTLAVNDATVKFEIWD 65
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKF 212
G R P+ + A A + ++D+TS + W E +K N + L G K
Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITSTESFARAKKWVQELQKQGNPNMVMALAGNKA 125
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D D + A +AR YA+ + LFF +SA +NVN F I +L
Sbjct: 126 D-----LEDKRKVTAEEARVYAE--ENGLFFTETSAKTAVNVNDTFYEIAKRL 171
>gi|167538218|ref|XP_001750774.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770691|gb|EDQ84373.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 8/166 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ LLG+ +GK+S V ++V G E G + +T+ V + F IWD G
Sbjct: 16 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVAVDDVTVKFEIWDTAGQE 75
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFDDFVR 217
R P+ + A A + ++D+T+ T W E R+ N + L G K D +
Sbjct: 76 RYHSLAPMYYRGAQAAIVVYDITNADTFQRARSWVKELQRQANPNIVIALAGNKADLASK 135
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D +ARAYA+ +SA + +NV +IF I KL
Sbjct: 136 QQVD-----TNEARAYAEENGLLFMETSAKNAMNVTEIFMAIAKKL 176
>gi|71896479|ref|NP_001025499.1| RAB5C, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89270950|emb|CAJ81259.1| RAB5C, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 83/188 (44%), Gaps = 9/188 (4%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGARI 147
+G + + K+ LLG+ +GK+S V ++V G E G + +TL + +
Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTV 70
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 206
F IWD G R P+ + A A + ++D+T+ T W E ++ I I
Sbjct: 71 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTETFARAKNWVKELQRQASPNIVIA 130
Query: 207 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL-FN 265
L G K D + D Q +A+AYA +SA +NVN+IF I KL N
Sbjct: 131 LSGNKADLSSKRAVDFQ-----EAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKN 185
Query: 266 LPWTVKRN 273
P + N
Sbjct: 186 EPQNAQGN 193
>gi|401885802|gb|EJT49887.1| putative Ras-related protein Rab-18 [Trichosporon asahii var.
asahii CBS 2479]
Length = 222
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE---QERSLQMAGLNLINKTLMVQGARIAFSIWDVG 155
+LK+ L+G+ +GK+S + ++ ++ +E + G++ K++ V G R SIWD
Sbjct: 12 NLKLLLIGNSSVGKSSLLLRFTDDDFLSEEETAATIGVDFKVKSVEVDGRRYKLSIWDTA 71
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFDD 214
G R + A ++ ++D+T R T + ++ W+ E + + + I++G K D
Sbjct: 72 GQERFRTLTSSYYRGAQGVILVYDVTQRNTFDELIKWFREIDTYCAEDVVKIIVGNKVDK 131
Query: 215 FV-----RLPPDLQWT---IATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
R ++T + +A+A M SA + VN F+ ++ ++
Sbjct: 132 VTLVAIRRADESQEFTRQVTTEEGQAFADRMGTLFMECSAKTRVGVNDAFQVLVRRILET 191
Query: 267 P--WT 269
P WT
Sbjct: 192 PSLWT 196
>gi|389749162|gb|EIM90339.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 214
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 16/183 (8%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDSR 159
KI LLGD +GKTS + +++ + + + Q G++ ++KTL + + +WD G R
Sbjct: 21 KIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTLYLDDRTVRLQLWDTAGQER 80
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFDDFVRL 218
+P +D+ + +FD+T+R + S W + R + + +L+G K D L
Sbjct: 81 FRSLIPSYIRDSTVAIVVFDITNRASFMSTTKWIDDVRSERGNDVMVVLVGNKAD----L 136
Query: 219 PPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
Q T+ A AK+ + + F +SA NV +FK I +LP K N
Sbjct: 137 SDKRQVTL---EEATAKSQQLNIMFMETSAKAGHNVKSLFKKIA---MSLPGMEKENQN- 189
Query: 277 GEP 279
EP
Sbjct: 190 AEP 192
>gi|72384499|gb|AAZ67615.1| 80A08_30 [Brassica rapa subsp. pekinensis]
Length = 223
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 89 SSGYDTDSDLVS--LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQG 144
S GY S + K+ L+GD +GK+ + +Y NE S G+ +TL++
Sbjct: 3 SGGYGDPSQKIDYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVMDH 62
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTA 203
+ IWD G R + AV + ++D+T R T + I W E R ++
Sbjct: 63 KSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRGHADKNI 122
Query: 204 IPILIGTKFDDFVRLPPDLQWTIATQ-ARAYAKAMKATLFFSSATHNINVNKIFKFIMAK 262
+ IL+G K D + Q I+T+ A+ +A+ +SA + +NV F ++ +
Sbjct: 123 VIILVGNKSD------LEDQRAISTEDAKEFAETEGLFFLETSALNAVNVETAFSTVLTE 176
Query: 263 LFNLPWTVKRNLTIGE 278
+FN+ K+NL GE
Sbjct: 177 IFNI--VNKKNLVAGE 190
>gi|326921972|ref|XP_003207227.1| PREDICTED: ras-related protein Rab-5A-like [Meleagris gallopavo]
Length = 215
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 9/198 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G + + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 7 TRPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A+AYA +SA ++NVN+IF I KL
Sbjct: 127 VIALAGNKADLANKRAVDFQ-----EAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
Query: 264 -FNLPWTVKRNLTIGEPI 280
N P N G +
Sbjct: 182 PKNEPQNTGANSARGRGV 199
>gi|168028226|ref|XP_001766629.1| Rab21-family small GTPase [Physcomitrella patens subsp. patens]
gi|162682061|gb|EDQ68482.1| Rab21-family small GTPase [Physcomitrella patens subsp. patens]
Length = 222
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 6/178 (3%)
Query: 81 LVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINK 138
+VE + G + +K+ LLGD ++GKTS ++YV N E+ + + K
Sbjct: 2 VVEAAEDRGGGRMRSGAPLQIKLVLLGDGRVGKTSLTLRYVNNIFSEKQTATIQASYLTK 61
Query: 139 TLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK 198
L+V G + IWD G R PI +DA A L ++DL + + + + W E +K
Sbjct: 62 RLVVDGQAVNLCIWDTAGQERFHALGPIYYRDADAALLVYDLLDKDSFDRVQSWVRELKK 121
Query: 199 WNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
I + I D +L Q + + YA+ + A F +SA N + + F
Sbjct: 122 MASKKIVLAIAGNKSDMDKLR---QVNMEDSVK-YAELIGAKHFVTSAKLNTGIEEAF 175
>gi|380027163|ref|XP_003697300.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-39B-like
[Apis florea]
Length = 218
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 7/170 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQ-GARIAFSIWDVGGD 157
++ L+GD +GK+S +KY G E S G++ + + V+ G RI +WD G
Sbjct: 10 FRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARLIEVKDGTRIKLQLWDTAGQ 69
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI--LIGTKFDDF 215
R +++V L ++D+ +R + I W +AR+ + P+ L+G K D
Sbjct: 70 ERFRSITKSYYRNSVGALLVYDVCNRASFEHIPQWMMDARRHIEPHRPVFALVGCKLD-- 127
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
+ + +ARA+A +SA INV + F+ + +++N
Sbjct: 128 LVTNGSRREVSKEEARAFADEHGVHHIETSAKTGINVEEAFRTVTQEVYN 177
>gi|266879|sp|P29687.1|RAB5_TOBAC RecName: Full=Ras-related protein Rab5
gi|19986|emb|CAA45352.1| Nt-rab5 [Nicotiana tabacum]
Length = 200
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ K+ LLGD GK+S V ++V + QE ++ G + T+ V A + F IWD
Sbjct: 9 LNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTI---GAAFFSSTVSVNNATVKFEIWD 65
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKF 212
G R P+ + A A + ++D+TS +L W E +K N + L G K
Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITSTESLARAKKWVQELQKQGNPNMVMALAGNKA 125
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D D + A +AR YA+ + LFF +SA NVN IF I +L
Sbjct: 126 D-----LEDKRKVTAEEARLYAE--ENGLFFMETSAKTATNVNDIFYEIAKRL 171
>gi|225468180|ref|XP_002273530.1| PREDICTED: ras-related protein Rab11A [Vitis vinifera]
gi|147811153|emb|CAN70163.1| hypothetical protein VITISV_039255 [Vitis vinifera]
Length = 226
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 18/198 (9%)
Query: 89 SSGYDTDSDLVS--LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQG 144
GY S + K+ L+GD +GK+ + ++ NE S G+ +TL++Q
Sbjct: 4 GGGYGDSSQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH 63
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTA 203
+ IWD G R + AV + ++D+T R + + I W E R ++
Sbjct: 64 KSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRGHADKNI 123
Query: 204 IPILIGTKFDDFVRLPPDLQWTIATQ-ARAYAKAMKATLFF--SSATHNINVNKIFKFIM 260
+ ILIG K D + Q + T+ A+ +A+ K LFF +SA NV F ++
Sbjct: 124 VIILIGNKTD------LEEQRAVPTEDAKEFAE--KEGLFFLETSALEATNVENAFLTVL 175
Query: 261 AKLFNLPWTVKRNLTIGE 278
++FN+ K+NL GE
Sbjct: 176 TEIFNI--VNKKNLVAGE 191
>gi|56118881|ref|NP_001008068.1| RAB5A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|51703418|gb|AAH80959.1| RAB5A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89267359|emb|CAJ83124.1| RAB5A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G + + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 8 TRPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 67
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 68 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 127
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A+AYA +SA ++NVN+IF I KL
Sbjct: 128 VIALSGNKADLASKRAVDFQ-----EAQAYADDNSLLFMETSAKTSVNVNEIFMAIAKKL 182
>gi|341881170|gb|EGT37105.1| hypothetical protein CAEBREN_13223 [Caenorhabditis brenneri]
Length = 210
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 8/173 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI LLG+ +GK+S V ++V N+ R L + ++KT+ + + IWD G
Sbjct: 13 FKIVLLGEGCVGKSSLVLRFVENKFSSRHLSTIQASFVSKTIHIDDCKAELHIWDTAGQE 72
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKFDDFVR 217
+ PI + + +L +FD+T R + + W E + +TA +++G K D
Sbjct: 73 KYHALGPIYYRGSNGVLLVFDITDRRSFERVKNWVLEIKTCLGKTAEILIVGNKTD---- 128
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTV 270
D + A YA + A +SA NI + + F+ + AK+ T
Sbjct: 129 -LEDERLISRQDAEVYADSENALYMETSAQDNIGIPEAFEALTAKMIEHARTA 180
>gi|319921858|gb|ADV78543.1| small GTP binding protein Rab5 [Oryza sativa Indica Group]
Length = 203
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 18/171 (10%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
K+ LLGD GK+S V ++V + QE ++ G ++TL V + F IWD G
Sbjct: 13 KLVLLGDVGTGKSSLVLRFVKGQFVEFQESTI---GAAFFSQTLAVNDETVKFEIWDTAG 69
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFDDF 215
R P+ + A A + ++D+T+ + W E + + N I L G K D
Sbjct: 70 QERYHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGNKADMI 129
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKLF 264
+ + A +AR YA+ + LFF +SA INVN +F I +L
Sbjct: 130 -----EARQVPAEEARTYAQ--ENGLFFMETSAKTAINVNDVFHEIAKRLL 173
>gi|115612989|ref|XP_790094.2| PREDICTED: ras-related protein Rab-31-like [Strongylocentrotus
purpuratus]
Length = 195
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 12/168 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDS 158
+K+ LLGD +GK+S V ++V + S+ G + ++KTL V F IWD G
Sbjct: 6 IKLCLLGDSGVGKSSIVQRFVSDTYYESIPPTIGASFMSKTLAVDEKMYKFQIWDTAGQE 65
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFD--DF 215
+ P+ + A A + ++D+TS+ + + + W E R+ I I I G K D D
Sbjct: 66 KYRGLAPMYYRGAAAAIVVYDITSQASFSKVRDWIRELRQHGPENIVISIAGNKCDLEDL 125
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
+P + A YA+ + A +SA N+ ++F I KL
Sbjct: 126 REIPVKI-------AAEYAEEVGAVFTETSAKTAANIKELFIAISKKL 166
>gi|332024332|gb|EGI64531.1| Ras-related protein RabJ [Acromyrmex echinatior]
Length = 219
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 8/177 (4%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRS 160
K+ +LG +GKTS + +YVGN + S +A + N + ++ +I +WD G R
Sbjct: 7 KVIMLGSQGVGKTSLIGRYVGNVEHVSPTIAA-SFFNCKINLEDVKIKLQVWDTAGQERF 65
Query: 161 FDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKFDDFVRLP 219
P+ + A L +FDLT T +I W E ++ +T + +LIG K D +
Sbjct: 66 RSMAPMYYRTCNAALLVFDLTQYSTFVAIKSWVKELQQNVEETMVLVLIGNKSDLVQKRQ 125
Query: 220 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
D + R YA + AT S +N V +F I L + N T+
Sbjct: 126 VD-----GEEGRRYATTIGATYHEISVLYNEGVKTVFLAIAMGLRRMASDNNDNTTL 177
>gi|340897464|gb|EGS17054.1| hypothetical protein CTHT_0073810 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 219
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 5/177 (2%)
Query: 91 GYDTDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMV-QGARI 147
G ++ K+ LLG+ +GK+S V +Q S + + G + +T+ + + +
Sbjct: 8 GARGNTRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTV 67
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPI 206
F IWD G R P+ ++A + ++D+T +L+ W E R+ N+ I
Sbjct: 68 KFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIA 127
Query: 207 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
L G K D V PD + A AYA+ F +SA NV ++F I KL
Sbjct: 128 LAGNKL-DLVADNPDKRAVQTADAEAYAREAGLLFFETSAKTAENVQELFTAIARKL 183
>gi|158295454|ref|XP_316217.3| AGAP006159-PA [Anopheles gambiae str. PEST]
gi|157016045|gb|EAA10814.3| AGAP006159-PA [Anopheles gambiae str. PEST]
Length = 242
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 8/171 (4%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNEQERSLQ-MAGLNLINKTLMVQGARIAFSIWDVGG 156
+ KI +LG +GKTS V +YV N + + G + + ++ ++ +WD G
Sbjct: 4 IEAKIVVLGSQGVGKTSLVVRYVSNVYTKEISPTIGASFFTCKVNLEDFKVKMQVWDTAG 63
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDF 215
R P+ ++A A L +FDLT + N I GW E ++ Q + + L+G K D
Sbjct: 64 QERFKAMAPLYYRNANAALLVFDLTQYNSFNEIKGWVQELQRNVQEPMVLSLVGNKLDLE 123
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+ + +A YA ++ F +SA H+ + ++F I L L
Sbjct: 124 AKRAVSRE-----EAMLYANSIGGNYFETSALHDQGIEQVFISIAVGLIKL 169
>gi|126307942|ref|XP_001364024.1| PREDICTED: ras-related protein Rab-5C-like [Monodelphis domestica]
Length = 216
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 13/195 (6%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGARI 147
+G + + K+ LLG+ +GK+S V ++V G E G + +T+ + +
Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTV 70
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 206
F IWD G R P+ + A A + ++D+T+ T W E ++ I I
Sbjct: 71 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIA 130
Query: 207 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL--- 263
L G K D + D Q +A+AYA+ +SA +NVN+IF I KL
Sbjct: 131 LAGNKADLGSKRAVDFQ-----EAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKLPKN 185
Query: 264 --FNLPWTVKRNLTI 276
N P RN +
Sbjct: 186 EPQNAPGAPGRNRGV 200
>gi|157120330|ref|XP_001653610.1| ras-related protein Rab-39B, putative [Aedes aegypti]
gi|108874991|gb|EAT39216.1| AAEL008959-PA [Aedes aegypti]
Length = 219
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
Query: 105 LLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQ-GARIAFSIWDVGGDSRSF 161
L+GD +GK+S +KY G E S G++ + V+ G RI +WD G R
Sbjct: 14 LIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFAHLIEVKDGTRIKLQLWDTAGQERFR 73
Query: 162 DHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI--LIGTKFDDFVRLP 219
+++V +L ++D+T+ + I W EA++ + P+ L+G K D V
Sbjct: 74 SITKSYYRNSVGVLLVYDITNHASFEHIPLWMMEAKRHIEPHRPVFALVGCKL-DLVNNG 132
Query: 220 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
+ +AR++A+ +SA +NV + F + +++N
Sbjct: 133 VQRREVSVEEARSFAEQNGLIFVETSARTGVNVREAFSLVTQEVYN 178
>gi|449544952|gb|EMD35924.1| hypothetical protein CERSUDRAFT_53067 [Ceriporiopsis subvermispora
B]
Length = 223
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 88/175 (50%), Gaps = 12/175 (6%)
Query: 99 VSLKISLLGDCQIGKTSFVKYVGNEQ----ERSLQMAGLNLINKTLMVQGARIAFSIWDV 154
+++K+ L+G+ +GK+S + +EQ + S G++ + V G ++ SIWD
Sbjct: 10 INVKLLLIGNSSVGKSSLLLRFSDEQWLPEDESSATIGVDFRVHKMEVNGKKVKLSIWDT 69
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFD 213
G R + A I+ ++D+ +R + +++ WYSE + + + + I++G K D
Sbjct: 70 AGQERFRTITSSYYRGAQGIILVYDVANRESFDALPRWYSELETYVSSSVVKIIVGNKVD 129
Query: 214 -DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLP 267
+F R ++ + +A+ M + +SA ++ V + F+ ++ K+ + P
Sbjct: 130 KEFSRQ------VSYSEGQQFAQRMGSLFVEASAKTSVGVREAFQEVVEKIIDTP 178
>gi|113931342|ref|NP_001039118.1| RAB22A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89268938|emb|CAJ82023.1| RAB22A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 193
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 8/162 (4%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVPHQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDD 214
G R P+ + + A + ++D+T T ++ W E R+ I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSTAAIIVYDITKEETFLTLKNWVKELRQHGPPNIVVAIAGNKCD- 121
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 122 ----LNDVREVLEKDAKDYADSINAVFVETSAKNAININELF 159
>gi|355714960|gb|AES05177.1| RAB5A, member RAS oncoprotein family [Mustela putorius furo]
Length = 213
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G +T + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 6 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 65
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 66 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 125
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 126 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 180
>gi|403347619|gb|EJY73239.1| Rab GTPase [Oxytricha trifallax]
Length = 230
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSI--WDVGG 156
L I +LGD +GKTS VK NE + + G++ + + + + + + WD G
Sbjct: 21 LNILILGDASVGKTSLVKLYNNETFELNRICTLGVDFYTRKVKSEYSNQTYKVCLWDTAG 80
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGW----YSEARKWNQTAIPILIGTKF 212
R K + AI+ FD+TS + ++V W Y +A ++ + IL+G K
Sbjct: 81 QERFRSIAHTFYKSSKAIIVAFDVTSLLSFENVVVWLKGIYQQA---SEEVVIILVGNKV 137
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D D + Q RA A K F +SA+ N NV +F FI+ K+
Sbjct: 138 D-----LKDQRRITFEQGRALANKYKIRYFETSASLNYNVENMFDFIIDKV 183
>gi|402900984|ref|XP_003913439.1| PREDICTED: ras-related protein Rab-37 isoform 2 [Papio anubis]
Length = 196
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 102 KISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ LLGD +GKT F+ + S + G++ NK + V G R+ IWD G
Sbjct: 4 KVMLLGDSGVGKTCFLIRFKDGAFLSGAFIATVGIDFRNKVVTVDGMRVKLQIWDTAGQE 63
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
R +DA A+L ++D+TS+ + +SI W +E ++ Q + I L+G K D
Sbjct: 64 RFRSVTHAYYRDAQALLLLYDITSKSSFDSIRAWLTEIHEYAQRDVVIMLLGNKAD 119
>gi|326922383|ref|XP_003207428.1| PREDICTED: ras-related protein Rab-17-like, partial [Meleagris
gallopavo]
Length = 212
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 8/166 (4%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRS 160
K+ LLG +GK+S +YV N+ + SL G + +T+ ++ A I IWD G +
Sbjct: 49 KMVLLGSTSVGKSSLAYRYVKNDFKESLPTVGCSFFTQTIQLETATIKLEIWDTAGQEKY 108
Query: 161 FDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK--WNQTAIPILIGTKFDDFVRL 218
+ + A A L ++DLT++ T N W E K + L+G K D
Sbjct: 109 HSVCHLYYRGAHAALLVYDLTNKETFNRAKQWLMELEKEFLPDEIVIALVGNKTD----- 163
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
D + A +A++ +SA N VN IF + +L
Sbjct: 164 LADEREVAAEDGEEFARSRSLLFMETSAKSNHQVNDIFMAVARELL 209
>gi|224142139|ref|XP_002324416.1| predicted protein [Populus trichocarpa]
gi|222865850|gb|EEF02981.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 14/176 (7%)
Query: 94 TDSDLVSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIA 148
T S+ + K+ LLGD GKTS V ++V + QE ++ G + L + A I
Sbjct: 4 TGSNNIQAKLVLLGDMGTGKTSLVLRFVKGQFLEFQESTI---GAAFFTQVLSLNEATIK 60
Query: 149 FSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPIL 207
F IWD G R P+ + A A + ++D+TS + W +E R+ N I L
Sbjct: 61 FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVTELQRQGNPNLIMFL 120
Query: 208 IGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
+G K D + ++ + YAK +SA NVN++F I +L
Sbjct: 121 VGNKVDLQQKRKVGIE-----EGEQYAKENGMVFLETSAKTAQNVNELFYEIAKRL 171
>gi|449677953|ref|XP_002167019.2| PREDICTED: ras-related protein Rab-21-like [Hydra magnipapillata]
Length = 217
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTS-FVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
+ K+ LLG+ +GKTS ++Y ++ ++ L +N+ L + RI SIWD G
Sbjct: 9 NFKVVLLGEGCVGKTSILLRYCQDKFNDKHLTTLQAAFLNRRLNIDSKRINLSIWDTAGQ 68
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + I G K D
Sbjct: 69 ERFHALGPIYYRDSQGAILVYDITDEDSFQKVKNWVKELRKMLGEEICLCIAGNKID--- 125
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ + ++A YAK++ A + +SA N + ++F
Sbjct: 126 --MEKERHVLVSEAEEYAKSVGAKHYHTSAKLNRGIEEMF 163
>gi|426394985|ref|XP_004063762.1| PREDICTED: rab-like protein 2B [Gorilla gorilla gorilla]
Length = 238
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 28/184 (15%)
Query: 92 YDTDSDLVSLKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAF 149
YD D ++ KI LGD +GK+ ++ + Q + L L L T V G I
Sbjct: 16 YDADDNV---KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILV 72
Query: 150 SIWDVGGDSR------SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTA 203
WD G R S+ H AC + +FD+ + T ++ WY+E R++
Sbjct: 73 DFWDTAGQERFQSMHASYYHKAHAC------IMVFDVQRKVTYRNLSTWYTELREFRPEI 126
Query: 204 IPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF--KFIMA 261
I++ K DD + ++ ++AK L+F SA NV K++ + +
Sbjct: 127 PCIVVANKIDDI---------NVTQKSFSFAKKFSLPLYFVSAADGTNVVKVWLTAEVAS 177
Query: 262 KLFN 265
KLFN
Sbjct: 178 KLFN 181
>gi|426336923|ref|XP_004031703.1| PREDICTED: rab-like protein 2B-like isoform 3 [Gorilla gorilla
gorilla]
Length = 238
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 28/184 (15%)
Query: 92 YDTDSDLVSLKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAF 149
YD D ++ KI LGD +GK+ ++ + Q + L L L T V G I
Sbjct: 16 YDADDNV---KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILV 72
Query: 150 SIWDVGGDSR------SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTA 203
WD G R S+ H AC + +FD+ + T ++ WY+E R++
Sbjct: 73 DFWDTAGQERFQSMHASYYHKAHAC------IMVFDVQRKVTYRNLSTWYTELREFRPEI 126
Query: 204 IPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF--KFIMA 261
I++ K DD + ++ ++AK L+F SA NV K++ + +
Sbjct: 127 PCIVVANKIDDI---------NVTQKSFSFAKKFSLPLYFVSAADGTNVVKVWLTAEVAS 177
Query: 262 KLFN 265
KLFN
Sbjct: 178 KLFN 181
>gi|392333087|ref|XP_003752788.1| PREDICTED: ras-related protein Rab-5A-like [Rattus norvegicus]
gi|392353206|ref|XP_003751425.1| PREDICTED: ras-related protein Rab-5A-like [Rattus norvegicus]
Length = 215
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G +T + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFSRAKNWVKELQRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A++YA +SA +NVN+IF I KL
Sbjct: 127 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTPMNVNEIFMAIAKKL 181
>gi|194762836|ref|XP_001963540.1| GF20451 [Drosophila ananassae]
gi|190629199|gb|EDV44616.1| GF20451 [Drosophila ananassae]
Length = 200
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 7/158 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ ++GD +GK+S + ++ + G++ +T+ + G R+ IWD G
Sbjct: 9 FKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIGGLRVKLQIWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R + ++ ++D+T+ + ++ W E + +L+G K DD
Sbjct: 69 RFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDVVNKVLVGNKNDD---- 124
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
PD + I A+ +AK M LF +SA NINV+++F
Sbjct: 125 -PDRKVVITEDAQRFAKQMDIELFETSAKDNINVDEMF 161
>gi|196002379|ref|XP_002111057.1| hypothetical protein TRIADDRAFT_23051 [Trichoplax adhaerens]
gi|190587008|gb|EDV27061.1| hypothetical protein TRIADDRAFT_23051 [Trichoplax adhaerens]
Length = 200
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 10/164 (6%)
Query: 96 SDLVSLKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWD 153
S +KI LGD +GK+ V+ + + + + L L L + G I IWD
Sbjct: 19 STTAKIKIICLGDSAVGKSKLVERFLMDDYKPQQLSTYALTLFRYNTTMNGKSIGVDIWD 78
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFD 213
G R P A A + FD+T + T ++ WY E R++ + +++ K
Sbjct: 79 TAGQERFASLHPSYYHQAHACILTFDVTRKITYKNLSRWYKELREYRPSIPCVVVANKI- 137
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 257
D+ ++I ++ + K +F SA+ NV K+F+
Sbjct: 138 -------DVDFSITKKSFNFVKKHNLPFYFVSASDGTNVVKVFR 174
>gi|442759105|gb|JAA71711.1| Putative gtpase [Ixodes ricinus]
Length = 215
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 10/161 (6%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +YV N+ ++ L + + K+L + G R+ +IWD G
Sbjct: 13 SFKVVLLGEGCVGKTSLVLRYVQNKFNDKHLTTLQASFLQKSLNIAGKRVHLAIWDTAGQ 72
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD-DF 215
+ PI +D+ + ++D+T + + W E RK + + ++G K D +
Sbjct: 73 EKFHALGPIYYRDSNGAILVYDITDEDSFQKVKSWVRELRKMLGGDVCLTIVGNKTDLEK 132
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
R P +A AYA ++ AT +SA + + ++F
Sbjct: 133 QRAVP------VAEAEAYAASVGATHLQTSAKLSRGIEELF 167
>gi|260825718|ref|XP_002607813.1| hypothetical protein BRAFLDRAFT_56868 [Branchiostoma floridae]
gi|229293162|gb|EEN63823.1| hypothetical protein BRAFLDRAFT_56868 [Branchiostoma floridae]
Length = 203
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 10/168 (5%)
Query: 92 YDTDSDLVSLKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAF 149
YD + +K+ LGD +GK+ V+ + Q + L L L V G +
Sbjct: 11 YDKEDGEYKVKVICLGDSAVGKSKLVERFLMDGYQPQQLSTYALTLFRYQTEVGGKDVCV 70
Query: 150 SIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIG 209
WD G R + P A + +FD+T + T ++ W+ E R++ + IP L+
Sbjct: 71 DFWDTAGQERFNNMHPSYYYQAHCCILVFDVTRKVTYKNLPNWFKELRQY-RPEIPCLVC 129
Query: 210 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 257
D+ + + ++ +AK + +F SA+ NV K+F+
Sbjct: 130 AN-------KIDVDYKVTQKSFNFAKKHQLPFYFVSASDGTNVVKMFR 170
>gi|47217560|emb|CAG02487.1| unnamed protein product [Tetraodon nigroviridis]
Length = 206
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 83/173 (47%), Gaps = 8/173 (4%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERS-LQMAGLNLINKTLMVQGAR 146
++G D D + K+ ++GD +GK+S + ++ N S + G++ +T+ + G +
Sbjct: 3 ATGMARDYDYL-FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEK 61
Query: 147 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 206
+ IWD G R + ++ ++D+TS + ++ W E + I
Sbjct: 62 VKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRI 121
Query: 207 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 259
L+G K DD P+ + T A+ +A+ M LF +SA NINV ++F I
Sbjct: 122 LVGNKNDD-----PNSKVVETTDAQKFAEQMGINLFETSAKENINVEEMFNCI 169
>gi|388854821|emb|CCF51502.1| probable Ras-related protein Rab-18 [Ustilago hordei]
Length = 232
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 94 TDSDLVSLKISLLGDCQIGKTS-FVKYVGNE---QERSLQMAGLNLINKTLMVQGARIAF 149
+ SD+ +LKI L+G +GK+S +++ +E E + G++ K + V G R
Sbjct: 2 SSSDIPTLKILLIGASSVGKSSLLLRFTDDEFLSPEETTATIGVDYRIKGIEVGGKRFKL 61
Query: 150 SIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW--NQTAIPIL 207
SIWD G R + A ++ +D+T R T +++ W++E + ++ + I+
Sbjct: 62 SIWDTAGQERFRTLTSSYYRGAQGVIIAYDVTQRDTFDALPTWFNELETFTTSEDVVKII 121
Query: 208 IGTKFD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+G K D +F R+ + + +A M SA + VN F ++ ++ +
Sbjct: 122 VGNKVDKEFSRV------VTTEEGQGFADKMGCLFVECSAKKGVGVNGAFDELVNRIIST 175
Query: 267 P 267
P
Sbjct: 176 P 176
>gi|355568894|gb|EHH25175.1| hypothetical protein EGK_08953 [Macaca mulatta]
Length = 223
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 102 KISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ LLGD +GKT F+ + S + G++ NK + V G R+ IWD G
Sbjct: 31 KVMLLGDSGVGKTCFLIRFKDGAFLSGAFIATVGIDFRNKVVTVDGMRVKLQIWDTAGQE 90
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
R +DA A+L ++D+TS+ + +SI W +E ++ Q + I L+G K D
Sbjct: 91 RFRSVTHAYYRDAQALLLLYDITSKSSFDSIRAWLTEIHEYAQRDVVIMLLGNKAD 146
>gi|297671900|ref|XP_002814060.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Pongo abelii]
gi|332215304|ref|XP_003256781.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Nomascus
leucogenys]
Length = 215
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G +T + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|6010033|emb|CAB57220.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Query: 99 VSLKISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMVQGARIAFSIWDVGG 156
++ K+ LLGD GK+S V Q Q + G ++TL V A + F IWD G
Sbjct: 9 LNAKLVLLGDMGAGKSSLVLLFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKFDDF 215
R P+ + A A + ++D+TS + W E +K N + L G K D
Sbjct: 69 QERYHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKAD-- 126
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D + A +AR YA+ + LFF +SA NVN +F I +L
Sbjct: 127 ---LEDKRKVTAEEARVYAE--ENGLFFMETSAKTAANVNDVFHEIAKRL 171
>gi|443895663|dbj|GAC73008.1| GTPase Rab18 [Pseudozyma antarctica T-34]
Length = 233
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Query: 96 SDLVSLKISLLGDCQIGKTSFV-KYVGNE---QERSLQMAGLNLINKTLMVQGARIAFSI 151
D+ +LKI L+G +GK+S + ++ +E E + G++ K + V G R SI
Sbjct: 5 GDVPTLKILLIGASSVGKSSLLLRFTDDEFLSPEETTATIGVDYRIKGIEVGGKRFKLSI 64
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW--NQTAIPILIG 209
WD G R + A ++ +D+T R T +++ W++E + ++ + I++G
Sbjct: 65 WDTAGQERFRTLTSSYYRGAQGVIIAYDVTQRDTFDALPTWFNELETFTTSEDVVKIIVG 124
Query: 210 TKFD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLP 267
K D +F R+ + +A+A M SA + VN F ++ ++ + P
Sbjct: 125 NKVDKEFSRV------VTTDEGQAFADKMGCLFVECSAKKGVGVNGAFDELVNRIISTP 177
>gi|417408714|gb|JAA50897.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 214
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G +T + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 6 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 65
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 66 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 125
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 126 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 180
>gi|351723071|ref|NP_001236498.1| uncharacterized protein LOC100527726 [Glycine max]
gi|255633056|gb|ACU16883.1| unknown [Glycine max]
Length = 194
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 11/174 (6%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
+S KI L+GD +GK+S V ++ + E G++ KTL V G R+ +IWD G
Sbjct: 13 LSFKILLIGDSGVGKSSLLVSFISSSVEDLSPTIGVDFKIKTLTVGGKRLKLTIWDTAGQ 72
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVG-WYSEARKW--NQTAIPILIGTKFDD 214
R + A I+ ++D+T R T ++ W E + NQ + IL+G K D
Sbjct: 73 ERFRTLNSSYYRKAQGIILVYDVTRRETFTNLSEVWSKEVELYSTNQDCVKILVGNKVD- 131
Query: 215 FVRLPPDLQWTIA-TQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLP 267
D + ++ + A AK + L SA NV + F+ + K+ P
Sbjct: 132 -----RDTERAVSREEGLALAKDLGCLLLECSAKTRENVEQCFEELALKIMEAP 180
>gi|209147261|gb|ACI32882.1| Ras-related protein Rab-5C [Salmo salar]
Length = 219
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 8/178 (4%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGAR 146
++G ++ + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 10 TNGAAANNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTT 69
Query: 147 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 206
+ F IWD G R P+ + A A + ++D+T+ T W E ++ I I
Sbjct: 70 VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVI 129
Query: 207 -LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
L G K D + D Q +A+AYA +SA +NVN+IF I KL
Sbjct: 130 ALAGNKADLANKRAVDFQ-----EAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|402900982|ref|XP_003913438.1| PREDICTED: ras-related protein Rab-37 isoform 1 [Papio anubis]
Length = 223
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 102 KISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ LLGD +GKT F+ + S + G++ NK + V G R+ IWD G
Sbjct: 31 KVMLLGDSGVGKTCFLIRFKDGAFLSGAFIATVGIDFRNKVVTVDGMRVKLQIWDTAGQE 90
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
R +DA A+L ++D+TS+ + +SI W +E ++ Q + I L+G K D
Sbjct: 91 RFRSVTHAYYRDAQALLLLYDITSKSSFDSIRAWLTEIHEYAQRDVVIMLLGNKAD 146
>gi|62898834|dbj|BAD97271.1| RAB6A, member RAS oncogene family isoform a variant [Homo sapiens]
Length = 208
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 8/189 (4%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGA 145
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 1 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP 205
I +WD G R +P +D+ A + ++D+T+ + W + R + I
Sbjct: 61 TIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDII 120
Query: 206 I-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
I L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 121 IMLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALP 175
Query: 265 NLPWTVKRN 273
+ T R+
Sbjct: 176 GMESTQDRS 184
>gi|452988143|gb|EME87898.1| hypothetical protein MYCFIDRAFT_70384 [Pseudocercospora fijiensis
CIRAD86]
Length = 222
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 5/170 (2%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQE--RSLQMAGLNLINKTLMVQGARIAFSIWDV 154
K+ LLG+ +GK+S V ++V ++ + R + L + + + F IWD
Sbjct: 14 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDEQTTVKFEIWDT 73
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFD 213
G R P+ ++A + ++D+T +L W E R+ N+ I L G K
Sbjct: 74 AGQERYKSLAPMYYRNANCAVVVYDITQAASLEKAKAWVKELQRQANENIIIALAGNKA- 132
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D V PD + A AYAK F +SA NV ++F I KL
Sbjct: 133 DLVAEQPDKRAVSTADAEAYAKEAGLLFFETSAKTAENVKELFTAIAKKL 182
>gi|330936207|ref|XP_003305289.1| hypothetical protein PTT_18094 [Pyrenophora teres f. teres 0-1]
gi|311317754|gb|EFQ86627.1| hypothetical protein PTT_18094 [Pyrenophora teres f. teres 0-1]
Length = 220
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 6/187 (3%)
Query: 96 SDLVSLKISLLGDCQIGKTSFV-KYVGNEQE--RSLQMAGLNLINKTLMVQGARIAFSIW 152
S K+ LLG+ +GK+S V ++V ++ + R + L + + + F IW
Sbjct: 14 SRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDENTTVKFEIW 73
Query: 153 DVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTK 211
D G R P+ ++A + ++D+T +L+ W E R+ N+ I L G K
Sbjct: 74 DTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGNK 133
Query: 212 FDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVK 271
D V PD + A YA+ F +SA NV ++F I KL +
Sbjct: 134 L-DLVTESPDKRAISTADAEQYAREAGLLFFETSAKTCENVKELFTAIAKKL-PIDQAGP 191
Query: 272 RNLTIGE 278
RNL G+
Sbjct: 192 RNLRPGQ 198
>gi|388453587|ref|NP_001253537.1| ras-related protein Rab-37 [Macaca mulatta]
gi|383417977|gb|AFH32202.1| ras-related protein Rab-37 isoform 2 [Macaca mulatta]
Length = 223
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 102 KISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ LLGD +GKT F+ + S + G++ NK + V G R+ IWD G
Sbjct: 31 KVMLLGDSGVGKTCFLIRFKDGAFLSGAFIATVGIDFRNKVVTVDGMRVKLQIWDTAGQE 90
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
R +DA A+L ++D+TS+ + +SI W +E ++ Q + I L+G K D
Sbjct: 91 RFRSVTHAYYRDAQALLLLYDITSKSSFDSIRAWLTEIHEYAQRDVVIMLLGNKAD 146
>gi|6010031|emb|CAB57219.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ K+ LLGD GK+S V ++V + QE ++ G ++TL+V A + F IWD
Sbjct: 9 LNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTI---GAAFFSQTLVVNDATVKFEIWD 65
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKF 212
G R P+ + A A + ++D+TS + W E +K N + L G K
Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKA 125
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D D + +AR YA+ + LFF +SA NVN +F I +L
Sbjct: 126 D-----LEDKRKVTVEEARVYAE--ENGLFFMETSAKTAANVNDVFHEIAKRL 171
>gi|440896494|gb|ELR48410.1| Ras-related protein Rab-5A, partial [Bos grunniens mutus]
Length = 218
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G +T + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 10 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 69
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 70 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 129
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 130 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 184
>gi|50979150|ref|NP_001003317.1| ras-related protein Rab-5A [Canis lupus familiaris]
gi|386781059|ref|NP_001248077.1| ras-related protein Rab-5A [Macaca mulatta]
gi|149729693|ref|XP_001495368.1| PREDICTED: ras-related protein Rab-5A-like [Equus caballus]
gi|296228179|ref|XP_002759690.1| PREDICTED: ras-related protein Rab-5A-like [Callithrix jacchus]
gi|301784142|ref|XP_002927485.1| PREDICTED: ras-related protein Rab-5A-like [Ailuropoda melanoleuca]
gi|395816586|ref|XP_003781781.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Otolemur
garnettii]
gi|402861674|ref|XP_003895210.1| PREDICTED: ras-related protein Rab-5A [Papio anubis]
gi|410971499|ref|XP_003992206.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Felis catus]
gi|131794|sp|P18066.1|RAB5A_CANFA RecName: Full=Ras-related protein Rab-5A
gi|47117089|sp|P61271.1|RAB5A_MACFA RecName: Full=Ras-related protein Rab-5A
gi|164056|gb|AAA30889.1| GTP-binding protein (rab5) [Canis lupus familiaris]
gi|14388408|dbj|BAB60752.1| hypothetical protein [Macaca fascicularis]
gi|281349668|gb|EFB25252.1| hypothetical protein PANDA_017269 [Ailuropoda melanoleuca]
gi|351700929|gb|EHB03848.1| Ras-related protein Rab-5A [Heterocephalus glaber]
gi|380787143|gb|AFE65447.1| ras-related protein Rab-5A [Macaca mulatta]
gi|383413157|gb|AFH29792.1| ras-related protein Rab-5A [Macaca mulatta]
gi|384941102|gb|AFI34156.1| ras-related protein Rab-5A [Macaca mulatta]
gi|431917016|gb|ELK16772.1| Ras-related protein Rab-5A [Pteropus alecto]
Length = 215
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G +T + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|19923231|ref|NP_002860.2| ras-related protein Rab-6A isoform a [Homo sapiens]
gi|397487242|ref|XP_003814714.1| PREDICTED: ras-related protein Rab-6A isoform 2 [Pan paniscus]
gi|4680635|gb|AAD27707.1|AF130122_1 small GTP binding protein RAB6 isoform [Homo sapiens]
gi|6684463|gb|AAF23593.1|AF119836_1 GTP-binding protein RAB6C [Homo sapiens]
gi|8163754|gb|AAF73841.1|AF198616_1 Rab GTPase RAB6A' [Homo sapiens]
gi|20379058|gb|AAM21089.1|AF498941_1 small GTP binding protein RAB6C [Homo sapiens]
gi|13177664|gb|AAH03617.1| RAB6A, member RAS oncogene family [Homo sapiens]
gi|16552748|dbj|BAB71371.1| unnamed protein product [Homo sapiens]
gi|46249771|gb|AAH68486.1| RAB6A protein [Homo sapiens]
gi|119595315|gb|EAW74909.1| RAB6A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119595317|gb|EAW74911.1| RAB6A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
Length = 208
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 8/189 (4%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGA 145
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 1 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAI 204
I +WD G R +P +D+ A + ++D+T+ + W + R + I
Sbjct: 61 TIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
Query: 205 PILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
+L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 121 IMLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALP 175
Query: 265 NLPWTVKRN 273
+ T R+
Sbjct: 176 GMESTQDRS 184
>gi|19923262|ref|NP_004153.2| ras-related protein Rab-5A [Homo sapiens]
gi|426339659|ref|XP_004033761.1| PREDICTED: ras-related protein Rab-5A [Gorilla gorilla gorilla]
gi|1346958|sp|P20339.2|RAB5A_HUMAN RecName: Full=Ras-related protein Rab-5A
gi|20379048|gb|AAM21084.1|AF498936_1 small GTP binding protein RAB5A [Homo sapiens]
gi|27462979|gb|AAO15677.1|AF464088_1 cervical cancer oncogene 10 protein [Homo sapiens]
gi|12654847|gb|AAH01267.1| RAB5A, member RAS oncogene family [Homo sapiens]
gi|17390678|gb|AAH18288.1| RAB5A, member RAS oncogene family [Homo sapiens]
gi|49168472|emb|CAG38731.1| RAB5A [Homo sapiens]
gi|117644362|emb|CAL37675.1| hypothetical protein [synthetic construct]
gi|117644826|emb|CAL37879.1| hypothetical protein [synthetic construct]
gi|119584705|gb|EAW64301.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119584706|gb|EAW64302.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119584707|gb|EAW64303.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123981774|gb|ABM82716.1| RAB5A, member RAS oncogene family [synthetic construct]
gi|123996593|gb|ABM85898.1| RAB5A, member RAS oncogene family [synthetic construct]
gi|189069166|dbj|BAG35504.1| unnamed protein product [Homo sapiens]
gi|261860476|dbj|BAI46760.1| RAB5A, member RAS oncogene family [synthetic construct]
Length = 215
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G +T + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|403356514|gb|EJY77853.1| Small GTPase Rab5c, putative [Oxytricha trifallax]
Length = 205
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 12/170 (7%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTL---MVQGARIAFSIWDVG 155
K+ LLGD +GKTS ++ Q + Q A G + ++K + A+I +WD
Sbjct: 5 FKVVLLGDTSVGKTSILQRFAKGQFKKDQDATIGAHFMSKIVELPQANNAQIKLQVWDTA 64
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDD 214
G + PI +DA A + +FD+TS+ TL + GW ++ R + I I L G K D
Sbjct: 65 GQEKYRSVTPIYFRDAAAAICVFDITSKQTLENAEGWINDLRSYAPNHIIIALAGNKSDL 124
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLF-FSSATHNINVNKIFKFIMAKL 263
+ + +Q + +A + +F +SA + +N++F I K+
Sbjct: 125 YAQEEVSIQM-----GKDFALKHQVEIFQQTSAKEDTGINELFLKIATKI 169
>gi|367018094|ref|XP_003658332.1| hypothetical protein MYCTH_2293959 [Myceliophthora thermophila ATCC
42464]
gi|347005599|gb|AEO53087.1| hypothetical protein MYCTH_2293959 [Myceliophthora thermophila ATCC
42464]
Length = 219
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 5/170 (2%)
Query: 98 LVSLKISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMV-QGARIAFSIWDV 154
K+ LLG+ +GK+S V +Q S + + G + +T+ + + + F IWD
Sbjct: 16 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDT 75
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFD 213
G R P+ ++A + ++D+T +L+ W E R+ N+ I L G K
Sbjct: 76 AGQERYKSLAPMYYRNANCAVVVYDITQATSLDKAKSWVKELQRQANENIIIALAGNKL- 134
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D V PD + A AYA+ F +SA NV ++F I KL
Sbjct: 135 DLVTEQPDKRAIETADAEAYAREAGLLFFETSAKTAENVQELFTAIAKKL 184
>gi|224096151|ref|XP_002310552.1| predicted protein [Populus trichocarpa]
gi|222853455|gb|EEE91002.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 89 SSGYDTDSDLVS--LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQG 144
GY S + K+ L+GD +GK+ + ++ NE S G+ +TL++
Sbjct: 4 GGGYGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDH 63
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTA 203
+ IWD G R + AV + ++D+T R T + I W E R ++
Sbjct: 64 KSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNI 123
Query: 204 IPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMA 261
+ ILIG K D D + A+ +A+ K LFF +SA NV F ++
Sbjct: 124 VIILIGNKSD-----LEDQRAVPTEDAKEFAQ--KEGLFFLETSALQATNVENAFMTVLT 176
Query: 262 KLFNLPWTVKRNLTIGEPIID 282
++FN+ K+NL GE I+
Sbjct: 177 EIFNI--VNKKNLVAGEDQIN 195
>gi|13385374|ref|NP_080163.1| ras-related protein Rab-5A [Mus musculus]
gi|32171710|sp|Q9CQD1.1|RAB5A_MOUSE RecName: Full=Ras-related protein Rab-5A
gi|12842239|dbj|BAB25527.1| unnamed protein product [Mus musculus]
gi|12845986|dbj|BAB26985.1| unnamed protein product [Mus musculus]
gi|13436026|gb|AAH04842.1| RAB5A, member RAS oncogene family [Mus musculus]
gi|21706419|gb|AAH34370.1| RAB5A, member RAS oncogene family [Mus musculus]
gi|26349503|dbj|BAC38391.1| unnamed protein product [Mus musculus]
gi|66396634|gb|AAH96481.1| Rab5a protein [Mus musculus]
gi|74139798|dbj|BAE31744.1| unnamed protein product [Mus musculus]
gi|74185181|dbj|BAE30082.1| unnamed protein product [Mus musculus]
gi|74198271|dbj|BAE35305.1| unnamed protein product [Mus musculus]
gi|74214066|dbj|BAE29448.1| unnamed protein product [Mus musculus]
gi|74219518|dbj|BAE29531.1| unnamed protein product [Mus musculus]
gi|112292955|dbj|BAF02855.1| Rab5A [Mus musculus]
gi|148691716|gb|EDL23663.1| RAB5A, member RAS oncogene family [Mus musculus]
Length = 215
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G +T + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|291399699|ref|XP_002716250.1| PREDICTED: RAB5A, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 215
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G +T + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|300797426|ref|NP_001180044.1| ras-related protein Rab-6A [Bos taurus]
gi|386782131|ref|NP_001248232.1| ras-related protein Rab-6A [Macaca mulatta]
gi|291384294|ref|XP_002708750.1| PREDICTED: RAB6A, member RAS oncogene family-like isoform 1
[Oryctolagus cuniculus]
gi|301759053|ref|XP_002915363.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Ailuropoda
melanoleuca]
gi|332211363|ref|XP_003254789.1| PREDICTED: ras-related protein Rab-6A isoform 2 [Nomascus
leucogenys]
gi|426245109|ref|XP_004016356.1| PREDICTED: ras-related protein Rab-6A [Ovis aries]
gi|296479822|tpg|DAA21937.1| TPA: RAB6A, member RAS oncogene family-like isoform 1 [Bos taurus]
gi|380788415|gb|AFE66083.1| ras-related protein Rab-6A isoform a [Macaca mulatta]
Length = 208
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 8/189 (4%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGA 145
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 1 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAI 204
I +WD G R +P +D+ A + ++D+T+ + W + R + I
Sbjct: 61 TIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
Query: 205 PILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
+L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 121 IMLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALP 175
Query: 265 NLPWTVKRN 273
+ T R+
Sbjct: 176 GMESTQDRS 184
>gi|417397129|gb|JAA45598.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 208
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 8/189 (4%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGA 145
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 1 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAI 204
I +WD G R +P +D+ A + ++D+T+ + W + R + I
Sbjct: 61 TIRLQLWDTAGQERFSSLIPSYIRDSTAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
Query: 205 PILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
+L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 121 IMLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALP 175
Query: 265 NLPWTVKRN 273
+ T R+
Sbjct: 176 GMESTQDRS 184
>gi|383100637|emb|CCF17540.1| RabE GTPase protein [Micrasterias denticulata]
Length = 206
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 8/159 (5%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQ--ERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
LK+ L+GD +GK+S + + + + G++ +T+ + G ++ SIWD G
Sbjct: 13 LKLLLIGDSSVGKSSLLLRFAEDSFSQTFISTIGVDFKTRTIDIDGEQVKLSIWDTAGQE 72
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFDDFVR 217
R + A I+ ++D+TS + NSI GW + ++ IL+G K D
Sbjct: 73 RFRTITAAYYRGANGIVLVYDITSESSFNSIRGWIRNIEEHASENVCKILVGNKAD---- 128
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
D + Q +A A + F +SA +INV + F
Sbjct: 129 -MEDRRVVSKEQGQALANEFRIKFFETSAKADINVEEAF 166
>gi|57530730|ref|NP_001006363.1| ras-related protein Rab-5A [Gallus gallus]
gi|53135109|emb|CAG32396.1| hypothetical protein RCJMB04_24h4 [Gallus gallus]
Length = 215
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G + + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 7 TRPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A+AYA +SA ++NVN+IF I KL
Sbjct: 127 VIALAGNKADLANKRAVDFQ-----EAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|343098455|ref|NP_001230202.1| ras-related protein Rab-6A [Sus scrofa]
Length = 208
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 8/189 (4%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGA 145
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 1 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAI 204
I +WD G R +P +D+ A + ++D+T+ + W + R + I
Sbjct: 61 TIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
Query: 205 PILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
+L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 121 IMLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALP 175
Query: 265 NLPWTVKRN 273
+ T R+
Sbjct: 176 GMESTQDRS 184
>gi|224045361|ref|XP_002196933.1| PREDICTED: ras-related protein Rab-5A [Taeniopygia guttata]
Length = 215
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G + + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 7 TRPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A+AYA +SA ++NVN+IF I KL
Sbjct: 127 VIALAGNKADLANKRAVDFQ-----EAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|289741455|gb|ADD19475.1| GTP-binding protein H-ray [Glossina morsitans morsitans]
Length = 200
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 7/158 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ ++GD +GK+S + ++ + G++ +T+++ G R+ IWD G
Sbjct: 9 FKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVVIDGMRVKLQIWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R + ++ ++D+T+ + ++ W E + +L+G K DD
Sbjct: 69 RFRTITSTYYRGTHGVIIVYDVTNGESFANVRRWLDEIQNNCDVVNKVLVGNKNDD---- 124
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
PD + I A+ +A+ M LF +SA N+NV ++F
Sbjct: 125 -PDRKVVITEDAQRFARQMDIELFETSAKDNVNVEEMF 161
>gi|213514896|ref|NP_001134562.1| ras-related protein Rab-35 [Salmo salar]
gi|209734286|gb|ACI68012.1| Ras-related protein Rab-35 [Salmo salar]
gi|209734894|gb|ACI68316.1| Ras-related protein Rab-35 [Salmo salar]
Length = 201
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ ++GD +GK+S + ++ N S + G++ +T+++ G ++ IWD G
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVVINGEKVKLQIWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R + ++ ++D+TS + ++ W E + IL+G K DD
Sbjct: 69 RFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDD---- 124
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 259
P+ + T A+ +A+ M LF +SA NINV ++F I
Sbjct: 125 -PNSKVVETTDAQKFAEQMGINLFETSAKENINVEEMFNCI 164
>gi|213972608|ref|NP_445818.1| ras-related protein Rab-6A [Rattus norvegicus]
gi|254750706|ref|NP_001157135.1| ras-related protein Rab-6A isoform 1 [Mus musculus]
gi|17512290|gb|AAH19118.1| Rab6 protein [Mus musculus]
gi|74150583|dbj|BAE32315.1| unnamed protein product [Mus musculus]
gi|148684517|gb|EDL16464.1| RAB6, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|149068776|gb|EDM18328.1| rCG39700, isoform CRA_d [Rattus norvegicus]
Length = 208
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 8/189 (4%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGA 145
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 1 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAI 204
I +WD G R +P +D+ A + ++D+T+ + W + R + I
Sbjct: 61 TIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
Query: 205 PILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
+L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 121 IMLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALP 175
Query: 265 NLPWTVKRN 273
+ T R+
Sbjct: 176 GMESTQDRS 184
>gi|393216771|gb|EJD02261.1| GTP binding protein [Fomitiporia mediterranea MF3/22]
Length = 215
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 8/171 (4%)
Query: 96 SDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWD 153
S L KI LLGD +GKTS + +++ + + + Q G++ ++KT+ ++ + +WD
Sbjct: 15 SPLKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 74
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKF 212
G R +P +D+ + +FD+T+R + S W E R + I +L+G K
Sbjct: 75 TAGQERFRSLIPSYIRDSSVAIVVFDITNRQSFLSTRKWIDEVRSERGNDVIIVLVGNKA 134
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D D + QA+ A +K +SA NV +F+ I L
Sbjct: 135 D-----LSDKREVTLEQAQELADELKIMFMETSAKAGHNVKSLFRKIALAL 180
>gi|66818593|ref|XP_642956.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897296|sp|Q550H6.1|RB11C_DICDI RecName: Full=Ras-related protein Rab-11C
gi|60471082|gb|EAL69052.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 224
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 88/170 (51%), Gaps = 10/170 (5%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI ++GD +GK++ + ++ NE E++ G++ K++ + I WD G
Sbjct: 11 FKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCWDTAGQE 70
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPIL-IGTKFD-DFV 216
R + AV + ++D+TS+ + ++ W +E R+ + I I+ +G K D +
Sbjct: 71 RFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGNKSDLEMS 130
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
R P +A+A+A++ K + +SA ++ NVN+ F+ ++ +++L
Sbjct: 131 REVP------TKEAQAFAESNKISFLETSALNSTNVNQSFERLLTDIYHL 174
>gi|414874079|tpg|DAA52636.1| TPA: ras protein RHN1 [Zea mays]
Length = 248
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 72 PAPDTMEAGLV--ELSRTF------SSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGN 122
P P + GL+ E F S + + + + K+ LLGD GK+S V ++V
Sbjct: 20 PQPGSFSCGLISSEARPQFRHQPSNSMAANFGNKIRNAKLVLLGDVGAGKSSLVLRFVKG 79
Query: 123 E----QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMF 178
+ QE ++ G ++TL V + F IWD G R P+ + A A + ++
Sbjct: 80 QFVEFQESTI---GAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVY 136
Query: 179 DLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAM 237
D+T+ + W E + + N I L G K D D + +A+ YA+
Sbjct: 137 DITNPASFTRAKKWVQELQAQGNPNTIVALAGNKVDML-----DARHVAVEEAKTYAQ-- 189
Query: 238 KATLFF--SSATHNINVNKIFKFIMAKLF 264
+ LFF +SA INVN IF I +L
Sbjct: 190 ENGLFFMETSAKTAINVNDIFYEIAKRLL 218
>gi|297469971|ref|XP_001249324.2| PREDICTED: ras-related protein Rab-21 [Bos taurus]
gi|297493177|ref|XP_002700179.1| PREDICTED: ras-related protein Rab-21 [Bos taurus]
gi|296470701|tpg|DAA12816.1| TPA: ras-related protein Rab-21-like [Bos taurus]
Length = 272
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V Y N+ ++ + + + K L + G R+ +IWD G
Sbjct: 66 SFKVVLLGEGCVGKTSLVLCYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 125
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R PI +D+ + ++D+T + + W E RK I + ++G K D
Sbjct: 126 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVD--- 182
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L + +I +A +YA+++ A + +SA N + ++F
Sbjct: 183 -LEKERHVSI-QEAESYAESVGAKHYHTSAKQNKGIEELF 220
>gi|392559791|gb|EIW52975.1| ras-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 227
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 91/186 (48%), Gaps = 12/186 (6%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFVKYVGNEQ----ERSLQMAGLNLINKTLMVQ 143
S D S +++K+ L+G+ +GK+S + +EQ + S G++ + V+
Sbjct: 1 MSQTQDKPSAPINVKLLLIGNSSVGKSSLLLRFSDEQWLPEDESNATIGVDFRVHKMEVK 60
Query: 144 GARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQT 202
R+ SIWD G R + A I+ ++D+ +R + ++ W+SE + + +
Sbjct: 61 SKRVKLSIWDTAGQERFRTITSSYYRGAQGIILVYDVANRESFEALPRWFSELETYVSSS 120
Query: 203 AIPILIGTKFD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMA 261
+ I++G K D ++ R Q + A + +A+A M A +SA + V F+ ++A
Sbjct: 121 VVKIIVGNKVDKEYSR-----QVSTA-EGQAFATRMGALFIEASAKTAVGVEDAFRDVVA 174
Query: 262 KLFNLP 267
++ + P
Sbjct: 175 RIIDTP 180
>gi|351713433|gb|EHB16352.1| Ras-related protein Rab-5A [Heterocephalus glaber]
Length = 221
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 9/198 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQG 144
T +G +T + + K+ LLG+ +GK+S V + G E G + +T+ +
Sbjct: 7 TRPNGANTGNKICQFKLVLLGESVVGKSSLVLHFVKGQFHEFQESTTGAAFLTQTMCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD+ G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDIAGQERYHSLAPMHYRGAQASIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L+G D R D Q +A++ A +SA ++NVN+IF I KL
Sbjct: 127 AIALLGNTADLANRRAVDFQ-----EAQSCADDNSFLFLETSAKTSMNVNEIFMAIAKKL 181
Query: 264 F-NLPWTVKRNLTIGEPI 280
N P N G +
Sbjct: 182 SKNEPQNPGENSARGRGV 199
>gi|395814866|ref|XP_003780960.1| PREDICTED: ras-related protein Rab-6A isoform 1 [Otolemur
garnettii]
Length = 208
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 8/189 (4%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGA 145
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 1 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAI 204
I +WD G R +P +D+ A + ++D+T+ + W + R + I
Sbjct: 61 TIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
Query: 205 PILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
+L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 121 IMLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALP 175
Query: 265 NLPWTVKRN 273
+ T R+
Sbjct: 176 GMESTQDRS 184
>gi|449281648|gb|EMC88684.1| Ras-related protein Rab-5A [Columba livia]
Length = 215
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G + + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 7 TRPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A+AYA +SA ++NVN+IF I KL
Sbjct: 127 VIALAGNKADLANKRAVDFQ-----EAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|66500451|ref|XP_623117.1| PREDICTED: ras-related protein Rab-39A [Apis mellifera]
Length = 218
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 7/170 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQ-GARIAFSIWDVGGD 157
++ L+GD +GK+S +KY G E S G++ + + V+ G RI +WD G
Sbjct: 10 FRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARLIEVKDGTRIKLQLWDTAGQ 69
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI--LIGTKFDDF 215
R +++V L ++D+ +R + I W +AR+ + P+ L+G K D
Sbjct: 70 ERFRSITKSYYRNSVGALLVYDVCNRASFEHIPQWMMDARRHIEPHRPVFALVGCKLD-- 127
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
+ + +ARA+A +SA +NV + F+ + +++N
Sbjct: 128 LVTNGSRREVSKEEARAFADEHGVHHIETSAKTGVNVEEAFRTVTQEVYN 177
>gi|441617414|ref|XP_004088443.1| PREDICTED: rab-like protein 2B [Nomascus leucogenys]
Length = 227
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 100 SLKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
++KI LGD +GK+ ++ + + Q + L L L T MV G I WD G
Sbjct: 20 NVKIICLGDSAVGKSKLMERFLMDSFQPQQLSTYALTLYKHTAMVDGKTILVDFWDTAGQ 79
Query: 158 SR------SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTK 211
R S+ H AC + +FD+ + T ++ WY+E R++ I++ K
Sbjct: 80 ERFQSMRASYYHKAHAC------IMVFDVQRKVTYKNLSTWYTELREFRPEIPCIVVANK 133
Query: 212 FDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
DD + ++ +AK L+F SA NV K+F
Sbjct: 134 IDDI---------NVTQKSFNFAKKFSLPLYFVSAADGTNVVKLF 169
>gi|340504816|gb|EGR31228.1| rab11b protein, putative [Ichthyophthirius multifiliis]
Length = 208
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 9/179 (5%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFVK-YVGNE-QERSLQMAGLNLINKTLMVQ-GARIAF 149
D + S KI L+GD +GKT+ +K YV N+ + G+ K ++++ G +I
Sbjct: 2 DNPDTIESYKIVLVGDASVGKTNLLKRYVKNQLPQNPAPTIGVEFATKQVVLKDGVKIKT 61
Query: 150 SIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LI 208
IWD G R + AV L ++D+T + +S+ W + + I I L+
Sbjct: 62 QIWDTAGQERYRSITSAHYRRAVGALLVYDITKEKSYSSVTKWMEDLKYQADPDIVIFLV 121
Query: 209 GTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKLFN 265
G K D V + +AR + A++ +FF +SA NVN++F+ ++ +++N
Sbjct: 122 GNKL-DLVEKNESARKVSKEEARNF--ALENKMFFEETSAVTAQNVNEVFEKLLQEIYN 177
>gi|224115414|ref|XP_002332129.1| predicted protein [Populus trichocarpa]
gi|222875179|gb|EEF12310.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 18/178 (10%)
Query: 94 TDSDLVSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIA 148
T + ++ K+ LLGD GK+S V ++V + QE ++ G ++TL V A +
Sbjct: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTI---GAAFFSQTLAVNDATVK 60
Query: 149 FSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPIL 207
F IWD G R P+ + A A + ++D++++ + W E + + N + L
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDISNQASFERAKKWVQELQAQGNPNMVMAL 120
Query: 208 IGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
G K D D + A +A+ YA+ + LFF +SA NVN IF I +L
Sbjct: 121 AGNKADLL-----DARKVTAEEAQVYAQ--EYGLFFIETSAKTATNVNDIFYEIAKRL 171
>gi|340501146|gb|EGR27957.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 204
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 10/178 (5%)
Query: 93 DTDSDLVS-LKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAF 149
DT + V+ K+ L+GD +GKT+FVK G ++R + G+N+ N L I F
Sbjct: 2 DTQTKYVAEFKLVLVGDGGVGKTTFVKRHQTGEFEKRYVATQGVNVSNLILNTNHGPIKF 61
Query: 150 SIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIG 209
++WD G + A A + MFD+TSR T ++ W+ + + + +L+G
Sbjct: 62 NLWDTAGQEKLGGLREGYYIGAHAAIIMFDVTSRITYKNVPKWHKDLTRICENIPIVLVG 121
Query: 210 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLP 267
K D R + + + + + SA N K F +I+ KL P
Sbjct: 122 NKVDSKDR-------KVKARQITFHRRRSLQYYDVSAKSNYQYEKPFLWILRKLIGDP 172
>gi|281201450|gb|EFA75660.1| GTP-binding nuclear protein Ran [Polysphondylium pallidum PN500]
gi|281201452|gb|EFA75662.1| hypothetical protein PPL_10923 [Polysphondylium pallidum PN500]
Length = 221
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 9/167 (5%)
Query: 100 SLKISLLGDCQIGKTSFVK-YVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S+KI L+GD +GKT +VK +V E Q R + G + +I F +WD G+
Sbjct: 14 SIKIVLIGDGGVGKTCYVKRHVSGEFQARYIPTVGCEVNPLPFYTNYGKILFDVWDTAGN 73
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVR 217
+ +A + MFD+TSR T +I W+S+ R+ + +++G K D R
Sbjct: 74 EQYGGLRDGYYINAQCAMLMFDVTSRMTYKNIPNWFSDLRRVCEDIPVVILGNKVDVKDR 133
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
+ + + + SA N N K F ++++KL
Sbjct: 134 -------KVKPSQITFHRKFGLGYYDISAKSNYNFEKPFTYLLSKLL 173
>gi|354466525|ref|XP_003495724.1| PREDICTED: ras-related protein Rab-37-like [Cricetulus griseus]
Length = 223
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 9/145 (6%)
Query: 73 APDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERS---LQ 129
A T + E S S YD ++ K+ LLGD +GKT F+ + S +
Sbjct: 7 AATTGDGEAPERSPPCSPNYD-----LTGKVMLLGDSGVGKTCFLIQFKDGAFLSGTFIA 61
Query: 130 MAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSI 189
G++ NK + V GAR+ IWD G R +DA A+L ++D+T++ + ++I
Sbjct: 62 TVGIDFRNKVVTVDGARVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNI 121
Query: 190 VGWYSEARKWNQ-TAIPILIGTKFD 213
W +E ++ Q + +L+G K D
Sbjct: 122 RAWLTEIHEYAQRDVVVMLLGNKAD 146
>gi|294888433|ref|XP_002772463.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
gi|239876689|gb|EER04279.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
Length = 215
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGAR-IAFSIWDVGG 156
S K+ LGD +GKTS + +++ + Q G++ + K + + R I +WD G
Sbjct: 18 SHKVIFLGDQSVGKTSIITRFLYGAFDTHYQATIGIDFVAKVITLDDGRMIKLQLWDTAG 77
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR--KWNQTAIPI-LIGTKFD 213
R +P +D A + +FDL+S+ + NS+ W + R K + I L+G K D
Sbjct: 78 QERFRSLIPAYLRDTAACVVVFDLSSKESFNSVRSWVDQVRDEKGTNGGVEIVLVGNKAD 137
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 259
DL+ +A A A+ + F +SA I++++IF I
Sbjct: 138 -----MADLRQVSNEEASALAEELGLKYFETSAKSGIDIDEIFTEI 178
>gi|240849221|ref|NP_001155353.1| ras-related protein Rab-5A [Ovis aries]
gi|238566829|gb|ACR46638.1| RAB5A [Ovis aries]
Length = 215
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGARI 147
+G +T + + K+ LLG+ +GK+S V ++V G E G + +T+ + +
Sbjct: 10 NGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTV 69
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 206
F IWD G R P+ + A A + ++D+T+ + W E ++ I I
Sbjct: 70 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIA 129
Query: 207 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 130 LSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|156554894|ref|XP_001600275.1| PREDICTED: ras-related protein Rab-39B-like [Nasonia vitripennis]
Length = 218
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 7/170 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQ-GARIAFSIWDVGGD 157
++ L+GD +GK+S +KY G E S G++ + + V+ G RI +WD G
Sbjct: 10 FRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARLIEVKDGTRIKLQLWDTAGQ 69
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI--LIGTKFDDF 215
R +++V L ++D+ +R + I W EAR+ + P+ L+G K D
Sbjct: 70 ERFRSITKSYYRNSVGALLVYDVCNRTSFEHIPRWMMEARRHIEPHRPVFCLVGCKLD-- 127
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
+ + +ARA+A +SA +NV + F+ + +++N
Sbjct: 128 LVTNGGRREVSREEARAFADQYGVHHVETSAKTGLNVEEAFRTVTQEVYN 177
>gi|255626087|gb|ACU13388.1| unknown [Glycine max]
Length = 204
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ K+ LLGD GK+S V ++V + QE ++ G ++TL V A + F IWD
Sbjct: 9 LNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTI---GAAFFSQTLAVNDATVKFEIWD 65
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKF 212
G R P+ + A A + ++D+TS + W E +K N + L G K
Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMALAGNKA 125
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIF 256
D D + A +AR YA+ + LFF +SA NVN IF
Sbjct: 126 D-----LEDKRKVTAEEARVYAE--ENGLFFMETSAKTASNVNDIF 164
>gi|145490291|ref|XP_001431146.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831437|emb|CAI39305.1| rab_C42 [Paramecium tetraurelia]
gi|124398249|emb|CAK63748.1| unnamed protein product [Paramecium tetraurelia]
Length = 400
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 7/168 (4%)
Query: 101 LKISLLGDCQIGKTS-FVKYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
LKI LLGD IGK+S + KY + G++ +K + QG ++ +WD G
Sbjct: 212 LKIILLGDNGIGKSSLYQKYCFQTIISTTPTIGVDCYDKIVEFQGKKLKIILWDTSGQEA 271
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKFDDFVRL 218
V C +A ++ F++++TS+ T I+ W + A+K ++ I +LIG K D L
Sbjct: 272 FMPIVQPHCNNANSVFFIYNITSKDTFQGIIKWINLAKKSASRNTINVLIGNKID----L 327
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
Q + +T+ + A+ +K + +SA ++ + +++ + L
Sbjct: 328 NSSRQVS-STEGQQLAQDLKLKFYETSARYDNPLEDPINYVLEQFLKL 374
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
+KI LGD GKT+ + KYV + + S G++ K++ QG I IWD G
Sbjct: 12 QIKILFLGDTDTGKTTLLLKYVTGKFDPSQTTIGVDFKYKSVGYQGKMIRIQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFD 213
R K+A F +D+T++ ++ ++ + + I ILIG K D
Sbjct: 72 RYRSINQTQFKNANCFFFFYDITNQKPFEEVLRLLNDVEQLASPDVIKILIGNKID 127
>gi|348537324|ref|XP_003456145.1| PREDICTED: ras-related protein Rab-22A-like [Oreochromis niloticus]
Length = 194
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 8/169 (4%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDD 214
G R P+ + + A + ++D+T + ++ W E R+ I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEDSFQTLKNWVKELRQHGPPNIVVAIAGNKCD- 121
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D + A+ YA ++ A +SA + IN+N++F I ++
Sbjct: 122 ----LSDAREVPEKDAKDYADSIHAIFVETSAKNAININEVFVEISKRI 166
>gi|323337771|gb|EGA79014.1| Sec4p [Saccharomyces cerevisiae Vin13]
Length = 186
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 12/181 (6%)
Query: 79 AGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNEQERS-LQMAGLNLI 136
+GL +S + +G DS +KI L+GD +GK+ V++V ++ S + G++
Sbjct: 2 SGLRTVSASSGNGKSYDS---IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFK 58
Query: 137 NKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEA 196
KT+ + G ++ +WD G R + A+ I+ ++D+T T +I W+
Sbjct: 59 IKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTV 118
Query: 197 RKW-NQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKI 255
+ N A +L+G K D R+ A Q A AK + SSA ++ NVN+I
Sbjct: 119 NEHANDEAQLLLVGNKSDMETRV------VTADQGEALAKELGIPFIESSAKNDDNVNEI 172
Query: 256 F 256
F
Sbjct: 173 F 173
>gi|154312633|ref|XP_001555644.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
Length = 237
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 87/205 (42%), Gaps = 22/205 (10%)
Query: 95 DSDLVSLKISLLGDCQIGKTSFV-KYV--GNEQERSLQMA---------------GLNLI 136
+S K+ LLG+ +GK+S V ++V G + R +M G +
Sbjct: 13 NSRFAQFKLVLLGESAVGKSSLVLRFVKPGYDSNREFRMNKDHTADHTTDRESTIGAAFL 72
Query: 137 NKTLMV-QGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE 195
+T+ + + + F IWD G R P+ ++A + ++D+T +L+ W E
Sbjct: 73 TQTISLDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKE 132
Query: 196 -ARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNK 254
R+ N+ I L G K D V PD + A YAK F +SA + NV +
Sbjct: 133 LQRQANENIIIALAGNKL-DLVTEQPDKRAITTEDASNYAKEAGLLFFETSAKTSENVRE 191
Query: 255 IFKFIMAKLFNLPWTVKRNLTIGEP 279
+F I KL L RN G P
Sbjct: 192 LFTAIAKKL-PLDQAGPRNPRAGGP 215
>gi|291237548|ref|XP_002738700.1| PREDICTED: RAB5B, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 217
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 15/188 (7%)
Query: 84 LSRTFSSG-YDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNEQERSLQMA-GLNLINKTL 140
+SR S+ YD K+ L+G+ +GK+S ++YV E ++ +Q G +KTL
Sbjct: 1 MSRNGSTQRYDKRPQRFQYKLVLVGEAGVGKSSLAMQYVRGEFDKDMQTTIGAAFTSKTL 60
Query: 141 MVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWN 200
V+ A I IWD G + + + A A + ++D+T + T + W R+ +
Sbjct: 61 HVENALIELQIWDTAGTEKYHSLASMYYRGAHAAIVVYDITQQTTFLRVNSW---VRELH 117
Query: 201 QTAIP----ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ A P IL G K D D + A+AYA T +SA +NV+ +F
Sbjct: 118 RQATPNIAIILAGNKAD-----LEDTRKVSCEDAQAYANDNSITFIETSAKTALNVDDLF 172
Query: 257 KFIMAKLF 264
+ KL
Sbjct: 173 STLAIKLH 180
>gi|380811476|gb|AFE77613.1| ras-related protein Rab-26 [Macaca mulatta]
Length = 256
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 5/151 (3%)
Query: 67 SSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNE-- 123
S + P PD G ++ R S G D V+ K+ L+GD +GKT V++
Sbjct: 31 SGTARPGPDAPPNGPLQPGRP-SLGGGGDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFL 89
Query: 124 QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSR 183
+ G++ NK L V G ++ +WD G R +DA A+L ++D+T++
Sbjct: 90 AGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNK 149
Query: 184 CTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
+ ++I W +E ++ Q + + L+G K D
Sbjct: 150 ASFDNIQAWLAEIHEYAQHDVALMLLGNKVD 180
>gi|341890273|gb|EGT46208.1| hypothetical protein CAEBREN_29374 [Caenorhabditis brenneri]
Length = 210
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GD +GKT V+ GN +R G++ KTL + G R+ IWD GG
Sbjct: 11 FKIVLVGDMGVGKTCVVQRFRSGNFVDRQGTTIGVDFTMKTLNIDGKRVKLQIWDTGGQE 70
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQ-TAIPILIGTKFDDFVR 217
R + A I+ +D+T + + S+ W + K+ + +LIGTK D
Sbjct: 71 RFRTITQSYYRSANGIVLCYDMTCKQSFGSLQRWIDDVSKFAAPNVVKLLIGTKCD---- 126
Query: 218 LPPDLQWTIATQARAYAKAMKA-TLFFSSATHNINVNKIF 256
D + A +A +A T+ +SA ++INV+ F
Sbjct: 127 -LEDQRAVEADEAEMLQRANGMFTMLETSAKNDINVDNAF 165
>gi|319411948|emb|CBQ73991.1| probable Ras-related protein Rab-18 [Sporisorium reilianum SRZ2]
Length = 233
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 96 SDLVSLKISLLGDCQIGKTSFV-KYVGNE---QERSLQMAGLNLINKTLMVQGARIAFSI 151
+D+ +LKI L+G +GK+S + ++ +E E + G++ K + V G R SI
Sbjct: 5 ADVPTLKILLIGASSVGKSSLLLRFTDDEFLSPEETTATIGVDYRIKGIEVGGKRFKLSI 64
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQT--AIPILIG 209
WD G R + A ++ +D+T R T +++ W++E + + + I++G
Sbjct: 65 WDTAGQERFRTLTSSYYRGAQGVIIAYDVTQRDTFDALPTWFNELETFTTSDDVVKIIVG 124
Query: 210 TKFD-DFVRLPPDLQWTIATQ-ARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLP 267
K D +F R+ + TQ +A+A M SA + VN F ++ ++ + P
Sbjct: 125 NKVDKEFSRV-------VTTQEGQAFADKMGCLFVECSAKKGVGVNGAFDELVNRIISTP 177
>gi|224069599|ref|XP_002326383.1| predicted protein [Populus trichocarpa]
gi|222833576|gb|EEE72053.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 18/193 (9%)
Query: 99 VSLKISLLGDCQIGKTS-FVKYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
+S KI L+GD +GK+S V ++ + E G++ K L V G R+ +IWD G
Sbjct: 14 LSFKILLIGDSGVGKSSLLVSFISSSVEDIAPTIGVDFKIKQLTVGGKRLKLTIWDTAGQ 73
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVG-WYSEARKW--NQTAIPILIGTKFDD 214
R ++A I+ ++D+T R T ++ W E + NQ + +L+G K D
Sbjct: 74 ERFRTLTSSYYRNAQGIILVYDVTRRETFTNLSDVWTKEVDLYSTNQDCVKMLVGNKVD- 132
Query: 215 FVRLPPDLQWTIA-TQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLP------ 267
D + + + + AK T SA NV + F+ + K+ +P
Sbjct: 133 -----KDSERDVTRDEGMSLAKEHGCTFLECSAKTRQNVEQCFEELALKIMEVPSLMEEG 187
Query: 268 -WTVKRNLTIGEP 279
VKRN+ +P
Sbjct: 188 STAVKRNILKQKP 200
>gi|403282653|ref|XP_003932756.1| PREDICTED: ras-related protein Rab-22A [Saimiri boliviensis
boliviensis]
Length = 248
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 6/156 (3%)
Query: 103 ISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDSRS 160
+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD G R
Sbjct: 62 LCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERF 121
Query: 161 FDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPP 220
P+ + + A + ++D+T T +++ W E R+ I + I D +
Sbjct: 122 RALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLI---- 177
Query: 221 DLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 178 DVREVMERDAKDYADSIHAIFVETSAKNAININELF 213
>gi|348551618|ref|XP_003461627.1| PREDICTED: rab-like protein 2A-like [Cavia porcellus]
Length = 217
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 25/173 (14%)
Query: 92 YDTDSDLVSLKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAF 149
YD D S+KI LGD +GK+ ++ + Q + L L+L T V G I
Sbjct: 16 YDADD---SVKIICLGDSAVGKSKLMERFLMDRFQPQQLSTYALSLYKHTATVDGKTILV 72
Query: 150 SIWDVGGDSR------SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTA 203
WD G R S+ H AC + +FD+ + T ++ WY+E R++
Sbjct: 73 DFWDTAGQERFQSMHASYYHKAHAC------IMVFDVQRKVTYKNLSAWYTELREFRPEI 126
Query: 204 IPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
I++ K D DLQ + ++ +A+ L+F SA NV K+F
Sbjct: 127 PCIVVANKID------ADLQ--VTQKSFNFARKFSLPLYFVSAADGTNVVKLF 171
>gi|288965976|gb|ADC79634.1| Ras family protein [Ditylenchus destructor]
Length = 211
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 15/170 (8%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQ--ERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GD +GKT V+ N E+ G++ KTL+V G RI IWD GG
Sbjct: 11 FKIVLIGDMGVGKTCVVQRFKNGSYIEKQGTTIGVDFTMKTLIVDGKRIKLQIWDTGGQE 70
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP----ILIGTKFDD 214
R + A I+ +D+T R + S+ W + K+ A+P ILIGTK D
Sbjct: 71 RFRTITQSYYRSANGIILCYDITCRQSSESLHRWIDDVSKF---AVPNVAKILIGTKAD- 126
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFS-SATHNINVNKIFKFIMAKL 263
D + + +A F S+ N+NV+ +F + +L
Sbjct: 127 ----LQDQRVIDPEEGEQLCRAHNMIKFLEVSSKSNVNVDVVFNELARQL 172
>gi|198427845|ref|XP_002120167.1| PREDICTED: similar to RAB12, member RAS oncogene family [Ciona
intestinalis]
Length = 223
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 95/183 (51%), Gaps = 12/183 (6%)
Query: 99 VSLKISLLGDCQIGKTSFVKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
+ L++ L+GD +GKT F++ ++ +E S G++ KT+ V G RI IWD G
Sbjct: 25 LKLQMILIGDRNVGKTCFLERYTDDLFREESKSTVGIDFRIKTVTVGGRRIRLQIWDTAG 84
Query: 157 DSRSFDHVPIA-CKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDD 214
R F+ + A ++A IL ++D+T+ + +I W ++ ++ + + ++G K D
Sbjct: 85 QER-FNSITTAYYRNARGILLLYDVTNPESYRNITKWMKLIEEYGRSDVEVAIVGNKAD- 142
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF-NLPWTVKRN 273
++Q +AR +A+ + +SA ++NV+ +F ++ K+ +P +RN
Sbjct: 143 ----LENVQVN-THKARNFAENCGFIFYETSAKASLNVDTVFVNLIYKILKQIPQPHERN 197
Query: 274 LTI 276
I
Sbjct: 198 PQI 200
>gi|224097728|ref|XP_002311057.1| predicted protein [Populus trichocarpa]
gi|222850877|gb|EEE88424.1| predicted protein [Populus trichocarpa]
Length = 214
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 12/189 (6%)
Query: 84 LSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERSLQ-MAGLNLINKTLMV 142
++ +FS G + D S KI L+GD +GK+S + + R L G++ K L V
Sbjct: 1 MAGSFSKGGNNSYDY-SFKILLIGDSGVGKSSLLLSFISSSVRDLSPTIGVDFKVKMLTV 59
Query: 143 QGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVG-WYSEARKW-- 199
G R+ +IWD G R + + A I+ ++D+T R T ++ W E +
Sbjct: 60 GGKRLKLTIWDTAGQERFGTLISSYYRGAHGIILVYDVTRRETFENLSDIWAKEVELYST 119
Query: 200 NQTAIPILIGTKFDDFVRLPPDLQWTIA-TQARAYAKAMKATLFFSSATHNINVNKIFKF 258
N I IL+G K D D + ++ + A A+ K + F SA + NV + FK
Sbjct: 120 NHDGIKILVGNKVD------RDSERAVSREEGMALAQQHKCSFFECSAKTSENVLQCFKE 173
Query: 259 IMAKLFNLP 267
+ K+ +P
Sbjct: 174 LTLKILEVP 182
>gi|156382558|ref|XP_001632620.1| predicted protein [Nematostella vectensis]
gi|156219678|gb|EDO40557.1| predicted protein [Nematostella vectensis]
Length = 209
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 12/190 (6%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFVKYVGNE--QERSLQMAGLNLINKTLMVQGARI 147
S Y + + LK+ LLGD +GK+ V ++ S G + K ++V
Sbjct: 2 SAYGSQDSIRELKVCLLGDAGVGKSCLVHRFVSDIFNASSPPTIGAAFMTKMMIVNDKAY 61
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPIL 207
F+IWD G R P+ +DA A + ++D+T T +S+ W E +++ I I
Sbjct: 62 KFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLRPWIRELQRYGPQDIVIA 121
Query: 208 I-GTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL--- 263
+ G K D D + A+ +A ++ A +SA + NV+ +F+ + KL
Sbjct: 122 VAGNKCDK-----ADQRDVQVQDAQDFAGSVDAIFAETSALTSKNVHWLFEELCKKLPHE 176
Query: 264 -FNLPWTVKR 272
+P+ K+
Sbjct: 177 NMEVPYHHKK 186
>gi|290998075|ref|XP_002681606.1| rab family small GTPase [Naegleria gruberi]
gi|284095231|gb|EFC48862.1| rab family small GTPase [Naegleria gruberi]
Length = 236
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 100 SLKISLLGDCQIGKTS----FVKYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVG 155
S KI LLG+ ++GKTS F+K V ++ ++S A + K ++V ++ S+WD
Sbjct: 6 SFKIVLLGEGRVGKTSLTLRFIKDVFDDNQQSTIQA--TYLQKDIIVGNQQVTLSVWDTA 63
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDD 214
G R PI ++A L ++D+T + T + W E RK I I ++G K D
Sbjct: 64 GQERFHALGPIYYRNADGALLVYDITDQDTFDRAKTWVMELRKVLGDDIVITIVGNKCDM 123
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF----KFIMAKLFNLP 267
+ QA YA+++ A SA N NV + F K I+ K N P
Sbjct: 124 IKH-----RQVSEEQALEYAQSVGANHLLVSAKANKNVAESFLDLTKRILEKKANTP 175
>gi|348677368|gb|EGZ17185.1| hypothetical protein PHYSODRAFT_351128 [Phytophthora sojae]
Length = 211
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 14/163 (8%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGAR----IAFSIWDV 154
+K+ LLGD +GK+ V +++ NE Q R L L L K + + G + WD
Sbjct: 20 VKVILLGDSAVGKSKLVERFMMNEYQPRQLSTFALTLFRKEVGLDGENGKRTVKVDFWDT 79
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDD 214
G R P A A + +FD+T + T ++ WY E R++ + L+ K
Sbjct: 80 AGQERFSSMHPSYYYGATACILVFDVTRKVTYQNLANWYKELREYCENIPCFLVANKI-- 137
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 257
D+ + ++ +A+ F SA NV K+FK
Sbjct: 138 ------DVDMNVTSKKFKFAETHNLEFSFVSAADGTNVVKVFK 174
>gi|388497366|gb|AFK36749.1| unknown [Lotus japonicus]
Length = 218
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 8/169 (4%)
Query: 101 LKISLLGDCQIGKTS-FVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ F ++ NE S G+ +TL V+G + IWD G
Sbjct: 13 FKVVLIGDSGVGKSNLFSRFTRNEFCLESKSTIGVEFATRTLEVEGRMVKAQIWDTAGQE 72
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVR 217
R + A+ L ++D+T + ++ W E R I I LIG K D
Sbjct: 73 RYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVIMLIGNKTD---- 128
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
L+ A++YA+ + +SA NV+K F+ I+A+++ +
Sbjct: 129 -LKHLRGVATEDAQSYAEKEGLSFIETSALEATNVDKAFQTILAQIYRI 176
>gi|110761970|ref|XP_001122072.1| PREDICTED: ras-related protein RabJ-like [Apis mellifera]
Length = 221
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 8/171 (4%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNEQERSLQ-MAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
K+ LG +GKTS + +Y+G L G + L V+ ARI +WD G R
Sbjct: 7 KVVALGSQGVGKTSIIMRYIGKSCNEHLNPTIGASFFTCKLNVENARIMLRVWDTAGQER 66
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFDDFVRL 218
P+ ++A A + +FDLT T ++ W +E R+ + + ++IG K D L
Sbjct: 67 FKSMAPMYYRNANAAMLVFDLTQYNTFAAMKRWVTELRRNVEEVMTLVVIGNKSD----L 122
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWT 269
+ Q A + R YA + A+ +S N + +F I + L L T
Sbjct: 123 TKERQ-VDAEEGRVYATKIGASYHETSVLQNEGIKNVFLAIGSGLLKLSST 172
>gi|347963812|ref|XP_310666.5| AGAP000433-PA [Anopheles gambiae str. PEST]
gi|347963814|ref|XP_003436992.1| AGAP000433-PB [Anopheles gambiae str. PEST]
gi|333467022|gb|EAA06272.6| AGAP000433-PA [Anopheles gambiae str. PEST]
gi|333467023|gb|EGK96454.1| AGAP000433-PB [Anopheles gambiae str. PEST]
Length = 219
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 105 LLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMV-QGARIAFSIWDVGGDSRSF 161
L+GD +GK+S +KY G E S G++ + V G RI +WD G R
Sbjct: 14 LIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFAHLIEVMDGTRIKLQLWDTAGQERFR 73
Query: 162 DHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI--LIGTKFDDFVRLP 219
+++V +L ++D+T+ + I W EA++ + P+ L+G K D
Sbjct: 74 SITKSYYRNSVGVLLVYDITNHASFEHIPLWMMEAKRHIEPHRPVFALVGCKLDLVTSGA 133
Query: 220 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
+ +I +AR +A+ +SA +NV + F + +++N
Sbjct: 134 QQREVSIE-EARTFAEQHGLIFVETSARSGMNVREAFTLVTQEVYN 178
>gi|417397259|gb|JAA45663.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 215
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G +T + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 127 VIALSGNKADLANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIGKKL 181
>gi|623586|gb|AAA74117.1| putative [Nicotiana tabacum]
Length = 208
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 84/171 (49%), Gaps = 8/171 (4%)
Query: 96 SDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWD 153
S L K+ LGD +GKTS + +++ ++ + + Q G++ ++KT+ ++ +A +WD
Sbjct: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVALQLWD 64
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKF 212
G R +P +D+ + ++D+ SR + + W E R + I +L+G K
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKT 124
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D L Q +I +A A A+ + +SA N+ +F+ I A L
Sbjct: 125 D----LVEKRQVSI-EEAEAKARELNVMFIETSAKAGFNIKPLFRKIAAAL 170
>gi|427787091|gb|JAA58997.1| Putative rab35 member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 200
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 15/165 (9%)
Query: 101 LKISLLGDCQIGKTSFV------KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDV 154
K+ ++GD +GK+S + + GN + G++ +TL V G R+ IWD
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFTGN----YITTIGVDFKIRTLEVDGERVKLQIWDT 64
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDD 214
G R + ++ ++D+T+ + ++ W E + IL+G K DD
Sbjct: 65 AGQERFRTITSTYYRGTHGVVVVYDVTNGESFANVKRWLHEIEQNCDVVNRILVGNKNDD 124
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 259
P + + A+ +A M LF +SA NINV ++F I
Sbjct: 125 -----PSRKVVLTEDAQRFADQMGIQLFETSAKENINVEEMFNAI 164
>gi|328869307|gb|EGG17685.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 244
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 99 VSLKISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
+ KI LLG +GKT+ V+Y G R L G + + K + V G RI F IWD G
Sbjct: 36 IECKIVLLGSTDVGKTAISVRYAEGIFPMRPLSTVGASFLTKNVNVDGNRIKFQIWDTAG 95
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFDDF 215
R + + A + +FD++S+ + + I W E + + + I+ G K D
Sbjct: 96 QERFRSLASMYYRGASVAILVFDVSSQKSFDKIKEWVQELKINIQEDIVMIVCGNKIDKE 155
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
+ D+ A+ YA +KA + +SA N ++ +F I +L
Sbjct: 156 RVVDRDI-------AKTYADDIKALYYETSAKMNEGIDVMFLEIAKRLL 197
>gi|449266530|gb|EMC77577.1| Ras-related protein Rab-21, partial [Columba livia]
Length = 201
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 8/155 (5%)
Query: 105 LLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFD 162
LLG+ +GKTS V +Y N+ ++ + + + K L + G R+ +IWD G R
Sbjct: 1 LLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHA 60
Query: 163 HVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVRLPPD 221
PI +D+ + ++D+T + + W E RK I + ++G K D L +
Sbjct: 61 LGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID----LEKE 116
Query: 222 LQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
++ +A YA+++ A + +SA N + ++F
Sbjct: 117 RHVSV-QEAETYAESVGAKHYHTSAKQNKGIEELF 150
>gi|410055384|ref|XP_001135766.3| PREDICTED: ras-related protein Rab-22A [Pan troglodytes]
Length = 230
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 6/156 (3%)
Query: 103 ISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDSRS 160
+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD G R
Sbjct: 44 LCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERF 103
Query: 161 FDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLPP 220
P+ + + A + ++D+T T +++ W E R+ I + I D +
Sbjct: 104 RALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLI---- 159
Query: 221 DLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
D++ + A+ YA ++ A +SA + IN+N++F
Sbjct: 160 DVREVMERDAKDYADSIHAIFVETSAKNAININELF 195
>gi|226498408|ref|NP_001147694.1| ras-related protein RHN1 [Zea mays]
gi|195613140|gb|ACG28400.1| ras-related protein RHN1 [Zea mays]
gi|195652993|gb|ACG45964.1| ras-related protein RHN1 [Zea mays]
gi|238006674|gb|ACR34372.1| unknown [Zea mays]
Length = 203
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
K+ LLGD GK+S V ++V + QE ++ G ++TL V + F IWD G
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTI---GAAFFSQTLAVNDETVKFEIWDTAG 69
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFDDF 215
R P+ + A A + ++D+T+ + W E + + N I L G K D
Sbjct: 70 QERYHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNPNTIVALAGNKVDML 129
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKLF 264
D + +A+ YA+ + LFF +SA INVN IF I +L
Sbjct: 130 -----DARHVAVEEAKTYAQ--ENGLFFMETSAKTAINVNDIFYEIAKRLL 173
>gi|317418736|emb|CBN80774.1| Ras-related protein Rab-22A [Dicentrarchus labrax]
Length = 194
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLGD +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDD 214
G R P+ + + A + ++D+T + ++ W E R+ I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAIAGNKCD- 121
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
D + A+ YA ++ A +SA + IN+N++F
Sbjct: 122 ----LSDAREVPEKDAKDYADSIHAIFVETSAKNAININEVF 159
>gi|240974176|ref|XP_002401800.1| zinc finger protein, putative [Ixodes scapularis]
gi|215491064|gb|EEC00705.1| zinc finger protein, putative [Ixodes scapularis]
gi|442756045|gb|JAA70182.1| Putative gtpase rab1/ypt1 small g protein superfamily [Ixodes
ricinus]
Length = 199
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 15/165 (9%)
Query: 101 LKISLLGDCQIGKTSFV------KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDV 154
K+ ++GD +GK+S + + GN + G++ +TL V G R+ IWD
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFTGN----YITTIGVDFKIRTLEVDGERVKLQIWDT 64
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDD 214
G R + ++ ++D+T+ + ++ W E + IL+G K DD
Sbjct: 65 AGQERFRTITSTYYRGTHGVVVVYDVTNGESFANVKRWLHEIEQNCDVVNRILVGNKNDD 124
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 259
P + + A+ +A M LF +SA NINV ++F I
Sbjct: 125 -----PSRKVVLTEDAQRFADQMGIQLFETSAKENINVEEMFNAI 164
>gi|402907305|ref|XP_003916417.1| PREDICTED: ras-related protein Rab-26 isoform 1 [Papio anubis]
Length = 256
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 7/163 (4%)
Query: 55 PAVRYQKLTRRSSSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKT 114
PA + R S + P PD G ++ R S G D ++ K+ L+GD +GKT
Sbjct: 21 PATNGPRPAR--SGTARPGPDAPPNGPLQPGRP-SLGGGGDFYDIAFKVMLVGDSGVGKT 77
Query: 115 SF-VKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDA 171
V++ + G++ NK L V G ++ +WD G R +DA
Sbjct: 78 CLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDA 137
Query: 172 VAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
A+L ++D+T++ + ++I W +E ++ Q + + L+G K D
Sbjct: 138 HALLLLYDVTNKASFDNIQAWLAEIHEYAQHDVALMLLGNKVD 180
>gi|41393159|ref|NP_958909.1| ras-related protein Rab-5C [Danio rerio]
gi|28277724|gb|AAH45466.1| RAB5C, member RAS oncogene family [Danio rerio]
gi|41351014|gb|AAH65634.1| RAB5C, member RAS oncogene family [Danio rerio]
gi|182891710|gb|AAI65047.1| Rab5c protein [Danio rerio]
Length = 221
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 8/169 (4%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVG 155
+ K+ LLG+ +GK+S V ++V G E G + +TL + + F IWD
Sbjct: 20 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKFEIWDTA 79
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDD 214
G R P+ + A A + ++D+T+ T W E ++ I I L G K D
Sbjct: 80 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADL 139
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
+ D Q +A+AYA +SA +NVN+IF I KL
Sbjct: 140 ANKRAVDFQ-----EAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 183
>gi|123471850|ref|XP_001319122.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121901898|gb|EAY06899.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 194
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 12/178 (6%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNEQERSL-QMAGLNLINKTLMVQGARIAFSIWDVGG 156
+ KI ++GD +GKTS + +YV E + ++ G++ K + + G +I IWD G
Sbjct: 4 IQKKIIVVGDSSVGKTSVIHRYVKGEFDSTIIATIGIDYRAKDIEINGQKIKLQIWDTIG 63
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFDDF 215
+ P + A ++ +D T + + + W Q++IP IL+G K D
Sbjct: 64 QEKYRSLAPQYFRRADGVILFYDTTVKTSFTHLQNWLDSIINNAQSSIPVILVGNKVDLP 123
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRN 273
+P + A +A+ K LFF SA N+++IF I L TV+++
Sbjct: 124 EVVPKE-------HAIDFARDKKLELFFCSAKSGDNIDQIFNRIAE--LTLQHTVEQD 172
>gi|354478791|ref|XP_003501598.1| PREDICTED: ras-related protein Rab-26-like, partial [Cricetulus
griseus]
Length = 234
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 70 SSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERS-- 127
+ P P+ + G + R S G D V+ K+ L+GD +GKT + + +
Sbjct: 12 ARPGPEALPNGPPQSGRP-SLGGSGDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGT 70
Query: 128 -LQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTL 186
+ G++ NK L V G ++ IWD G R +DA A+L ++D+T++ +
Sbjct: 71 FISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSF 130
Query: 187 NSIVGWYSEARKW-NQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFF-- 243
++I W +E +++ Q + +L+G K D Q + + A + L F
Sbjct: 131 DNIQAWLTEIQEYAQQDVVLMLLGNKVD-------STQERVVKREDGEKLAKEYGLPFME 183
Query: 244 SSATHNINVNKIFKFIMAKL 263
+SA +NV+ F I +L
Sbjct: 184 TSAKTGLNVDLAFTAIAKEL 203
>gi|297849266|ref|XP_002892514.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
gi|297338356|gb|EFH68773.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 8/169 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +TL V+G + IWD G
Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQE 72
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVR 217
R + A+ L ++D+T T ++ W E R + I I LIG K D
Sbjct: 73 RYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTD---- 128
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
L+ A++YA+ + +SA +NV K F+ I+++++ +
Sbjct: 129 -LKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRI 176
>gi|195163365|ref|XP_002022521.1| GL12921 [Drosophila persimilis]
gi|194104513|gb|EDW26556.1| GL12921 [Drosophila persimilis]
Length = 200
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ ++ D +GK+S + ++ + G++ +T+ + G R+ IWD G
Sbjct: 9 FKLLIIADSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIDGLRVKLQIWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R + ++ ++D+T+ + ++ W E + +L+G K DD
Sbjct: 69 RFRTITSTYYRGTHGVIIVYDVTNGDSFANVRRWLEEIQNNCDVVNKVLVGNKNDD---- 124
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
PD + I A+ +AK M L+ +SA NINV+ +F I ++ N
Sbjct: 125 -PDCKVVITEDAQRFAKQMDIELYETSAKDNINVDNMFLSITRQVLN 170
>gi|225707110|gb|ACO09401.1| Ras-related protein Rab-5C [Osmerus mordax]
Length = 219
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 8/178 (4%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGAR 146
++G + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 10 TNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTT 69
Query: 147 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 206
+ F IWD G R P+ + A A + ++D+T+ T W E ++ I I
Sbjct: 70 VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVI 129
Query: 207 -LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
L G K D + D Q +A+AYA +SA +NVN+IF I KL
Sbjct: 130 ALAGNKADLANKRAVDFQ-----EAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|15237828|ref|NP_200723.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
gi|75170819|sp|Q9FIF9.1|RAA2D_ARATH RecName: Full=Ras-related protein RABA2d; Short=AtRABA2d
gi|13877729|gb|AAK43942.1|AF370127_1 putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|9759237|dbj|BAB09761.1| GTP-binding protein rab11 [Arabidopsis thaliana]
gi|14532854|gb|AAK64109.1| putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|332009766|gb|AED97149.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
Length = 217
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 8/169 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GD +GKT+ + ++ NE S G+ +TL V+G + IWD G
Sbjct: 13 FKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQE 72
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDFVR 217
R + AV L ++D+T R T ++++ W E R + I I++ G K D
Sbjct: 73 RYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKAD---- 128
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
L+ + A+ + +SA NV K F+ ++A+++++
Sbjct: 129 -LNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHI 176
>gi|167518440|ref|XP_001743560.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777522|gb|EDQ91138.1| predicted protein [Monosiga brevicollis MX1]
Length = 180
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 11/162 (6%)
Query: 100 SLKISLLGDCQIGKTSFVK-YV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
++K+ LLGD GK+S + YV G+ R G + + K + + + SIWD G
Sbjct: 5 NVKLCLLGDAGCGKSSLAQLYVYGSCPPRLEPTIGASFLTKMITLDNRELKLSIWDTAGQ 64
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWN--QTAIPILIGTKFDDF 215
+ P+ +DA A + ++D+T T ++ W SE N Q + G K D
Sbjct: 65 EKYRGLAPMYYRDAEAAVIVYDITKASTFQNVRSWVSELTAINPGQRLALAIAGNKAD-- 122
Query: 216 VRLPPDLQWTIATQ-ARAYAKAMKATLFFSSATHNINVNKIF 256
D Q +A Q A YA+++ A F +SA INV+++F
Sbjct: 123 ----LDEQRQVAYQDASKYAESVGAIFFETSAIQGINVHELF 160
>gi|449283056|gb|EMC89759.1| Ras-related protein Rab-37, partial [Columba livia]
Length = 213
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
L++ LLGD +GKT F+ + S + G++ NK + V G ++ IWD G
Sbjct: 20 LQVMLLGDSGVGKTCFLLQFKDGAFLSGTFIATVGIDFRNKVVAVDGVKVKLQIWDTAGQ 79
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
R +DA A+L ++D+TS+ + ++I W +E ++ Q + I L+G K D
Sbjct: 80 ERFRSVTHAYYRDAQALLLLYDITSKMSFDNIRAWLTEIHEYAQKDVVIMLLGNKAD 136
>gi|195131589|ref|XP_002010233.1| GI14806 [Drosophila mojavensis]
gi|193908683|gb|EDW07550.1| GI14806 [Drosophila mojavensis]
Length = 201
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ ++GD +GK+S + ++ + G++ +T+ + G R+ IWD G
Sbjct: 9 FKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVEINGLRVKLQIWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R + ++ ++D+T+ + ++ W E + +L+G K DD
Sbjct: 69 RFRTITSTYYRGTHGVIIVYDVTNGDSFANVRRWLEEIQNNCDVVNKVLVGNKNDD---- 124
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
PD + I A+ +A+ M LF +SA NINV +F I ++ +
Sbjct: 125 -PDRKVVITEDAQRFARQMDIELFETSAKDNINVEDMFLSITRQVLD 170
>gi|410902731|ref|XP_003964847.1| PREDICTED: ras-related protein Rab-5C-like [Takifugu rubripes]
Length = 220
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T ++G + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 8 TRTNGTAVSNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDD 67
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ T W E ++ I
Sbjct: 68 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNI 127
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A+AYA +SA +NVN+IF I KL
Sbjct: 128 VIALAGNKADLANKRAVDHQ-----EAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|357629667|gb|EHJ78287.1| hypothetical protein KGM_09470 [Danaus plexippus]
Length = 263
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 17/182 (9%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTS-FVKY------VGNEQERSLQMAGLNLINKTLMV 142
+G D V K+ LLGD +GKT V++ GN + G++ NK + V
Sbjct: 61 TGKQEDKYDVFGKVMLLGDSGVGKTCMLVRFRDGTFLAGN----YISTVGIDFRNKVVTV 116
Query: 143 QGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQT 202
G ++ IWD G R +DA A+L ++D+T++ + ++I W E R++ Q
Sbjct: 117 DGIKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTSFDNIRAWLGEIREYAQD 176
Query: 203 AIPI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMA 261
+ I L+G K D + + + + A+ + +SA +NV F +
Sbjct: 177 DVVIMLLGNKSDSGLERAVRRE-----EGQRLAREYQVAFMETSAKTGLNVEAAFSHVAR 231
Query: 262 KL 263
L
Sbjct: 232 SL 233
>gi|221220906|gb|ACM09114.1| Ras-related protein Rab-5C [Salmo salar]
Length = 219
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 8/178 (4%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGAR 146
++G + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 10 TNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTT 69
Query: 147 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 206
+ F IWD G R P+ + A A + ++D+T+ T W E ++ I I
Sbjct: 70 VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVI 129
Query: 207 -LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
L G K D + D Q +A+AYA +SA +NVN+IF I KL
Sbjct: 130 ALAGNKADLANKRAVDFQ-----EAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|15235113|ref|NP_193699.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|75337446|sp|Q9SN68.1|RAF2B_ARATH RecName: Full=Ras-related protein RABF2b; Short=AtRABF2b; AltName:
Full=Ras-related protein Ara-7; AltName:
Full=Ras-related protein Rab5B; Short=AtRab5B
gi|13878093|gb|AAK44124.1|AF370309_1 putative small GTP-binding protein [Arabidopsis thaliana]
gi|2853090|emb|CAA16940.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|7268760|emb|CAB78966.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|12964606|dbj|BAB32669.1| Ara7 [Arabidopsis thaliana]
gi|15450605|gb|AAK96574.1| AT4g19640/F24J7_190 [Arabidopsis thaliana]
gi|17104761|gb|AAL34269.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|332658807|gb|AEE84207.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 200
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 18/173 (10%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ K+ LLGD GK+S V ++V ++ QE ++ G ++TL V A + F IWD
Sbjct: 9 INAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTI---GAAFFSQTLAVNDATVKFEIWD 65
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKF 212
G R P+ + A A + +FD+T++ + W E + + N + L G K
Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKS 125
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D D + A A+ YA+ + LFF +SA NV +IF I +L
Sbjct: 126 DLL-----DARKVTAEDAQTYAQ--ENGLFFMETSAKTATNVKEIFYEIARRL 171
>gi|297738167|emb|CBI27368.3| unnamed protein product [Vitis vinifera]
Length = 191
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ K+ LLGD GK+S V ++V + QE ++ G ++TL V A + F IWD
Sbjct: 9 LNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTI---GAAFFSQTLAVNDATVKFEIWD 65
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKF 212
G R P+ + A A + ++D+TS + W E +K N + L G K
Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITSTESFARAKKWVQELQKQGNPNMVMALAGNKA 125
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIF 256
D D + A +AR YA+ + LFF +SA +NVN F
Sbjct: 126 D-----LEDKRKVTAEEARVYAE--ENGLFFTETSAKTAVNVNDTF 164
>gi|623584|gb|AAA74116.1| putative, partial [Nicotiana tabacum]
Length = 209
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 8/168 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI ++GD +GK++ + +Y NE S G+ +TL + G + IWD G
Sbjct: 5 FKIVIIGDSAVGKSNLLTRYARNEFNLHSKATIGVEFQTQTLEIDGKEVKAQIWDTAGQE 64
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFDDFVR 217
R + A L ++D+T R T +SI W E + + T + +L+G K D
Sbjct: 65 RFRAVTSAYYRGAFGALVVYDITRRTTFDSIPRWLDELKTHSDTTVARMLVGNKCD---- 120
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
+++ + ++ A++ +SA NVNK F ++ +++N
Sbjct: 121 -LDNIRAVSVEEGKSLAESEGMFFMETSALDATNVNKAFDMVIREIYN 167
>gi|363807594|ref|NP_001242153.1| uncharacterized protein LOC100791620 [Glycine max]
gi|255642884|gb|ACU22609.1| unknown [Glycine max]
Length = 200
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ K+ LLGD GK+ V ++V + QE ++ G ++TL V A + F IWD
Sbjct: 9 LNAKLVLLGDMGAGKSGLVLRFVKGQFLEFQESTI---GAAFFSQTLAVNDATVKFEIWD 65
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKF 212
G R P+ + A A + ++D+TS + W E +K N + L G K
Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMALAGNKA 125
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D D + A +AR YA+ + LFF +SA NVN IF I +L
Sbjct: 126 D-----LEDKRKVTAEEARVYAE--ENGLFFMETSAKTASNVNDIFYEIAKRL 171
>gi|388501294|gb|AFK38713.1| unknown [Medicago truncatula]
Length = 208
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ K+ LLGD GK+S V ++V + QE ++ G ++TL V A + F IWD
Sbjct: 9 LNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTI---GAAFFSQTLAVNDATVKFEIWD 65
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKF 212
G R P+ + A A + ++D+T+ + W E +K N + G K
Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNLESFTRAKKWVQELQKQGNPNMVVAFAGNKA 125
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D D + A +AR YA+ + LFF +SA NVN IF I KL
Sbjct: 126 D-----LEDKRKVTAEEARVYAE--ENGLFFIETSAKTAANVNDIFYEIAKKL 171
>gi|255710579|ref|XP_002551573.1| KLTH0A02662p [Lachancea thermotolerans]
gi|238932950|emb|CAR21131.1| KLTH0A02662p [Lachancea thermotolerans CBS 6340]
Length = 213
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 10/166 (6%)
Query: 101 LKISLLGDCQIGKTSF-VKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
+KI L+GD +GK+ V++V ++ S + G++ KT+ + G ++ +WD G
Sbjct: 21 MKILLVGDSGVGKSCLLVRFVEDKFSPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFDDFVR 217
R + A+ I+ ++D+T T ++I W+S + N A +L+G K D
Sbjct: 81 RFRTITTAYYRGAMGIILVYDVTDERTFSNIKQWFSTVNQHANDEAQLLLVGNKSD---- 136
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D + Q A AK + +SA + NVN IF F++AKL
Sbjct: 137 --MDTRAVSTDQGEALAKELGIPFVEASAKDDTNVNDIF-FLLAKL 179
>gi|426394987|ref|XP_004063763.1| PREDICTED: rab-like protein 2B [Gorilla gorilla gorilla]
Length = 228
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 26/173 (15%)
Query: 92 YDTDSDLVSLKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAF 149
YD D ++ KI LGD +GK+ ++ + Q + L L L T V G I
Sbjct: 16 YDADDNV---KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILV 72
Query: 150 SIWDVGGDSR------SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTA 203
WD G R S+ H AC + +FD+ + T ++ WY+E R++
Sbjct: 73 DFWDTAGQERFQSMHASYYHKAHAC------IMVFDVQRKVTYRNLSTWYTELREFRPEI 126
Query: 204 IPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
I++ K DD + ++ ++AK L+F SA NV K+F
Sbjct: 127 PCIVVANKIDDI---------NVTQKSFSFAKKFSLPLYFVSAADGTNVVKLF 170
>gi|326437345|gb|EGD82915.1| Rabl2a protein [Salpingoeca sp. ATCC 50818]
Length = 208
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 16/182 (8%)
Query: 77 MEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLN 134
M + +L+ T +G +T +K+ LGD +GK+ V+ + + + L L
Sbjct: 1 MADDVAKLAETSGTGENT------VKVICLGDSAVGKSKLVERFLMDDYKPHQLSTYALT 54
Query: 135 LINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYS 194
L T V + WD G R P +A + + +FD+T + T ++ WY
Sbjct: 55 LFKHTATVGDKEVVVDFWDTAGQERFSSMHPSYYHEAHSCILVFDITRKVTYKNLQTWYK 114
Query: 195 EARKWNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNK 254
E RK+ I + K D+ +++ ++ + K F SA+ NV K
Sbjct: 115 ELRKYRPKIPVICVANKI--------DIDYSVTQKSFGFPKKHGLPFHFVSASDGTNVVK 166
Query: 255 IF 256
+F
Sbjct: 167 VF 168
>gi|351701680|gb|EHB04599.1| Ras-related protein Rab-37 [Heterocephalus glaber]
Length = 252
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 102 KISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ LLGD +GKT F+ + S + G++ NK + V GAR+ IWD G
Sbjct: 31 KVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGARVKLQIWDTAGQE 90
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
R +DA A+L ++D+T++ + ++I W +E ++ Q + I L+G K D
Sbjct: 91 RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIVLLGNKAD 146
>gi|15242309|ref|NP_199326.1| Ras-related protein RHA1 [Arabidopsis thaliana]
gi|297794787|ref|XP_002865278.1| hypothetical protein ARALYDRAFT_494466 [Arabidopsis lyrata subsp.
lyrata]
gi|400976|sp|P31582.1|RAF2A_ARATH RecName: Full=Ras-related protein RABF2a; Short=AtRABF2a; AltName:
Full=Ras-related protein Rab5A; Short=AtRab5A; AltName:
Full=Ras-related protein Rha1
gi|14488100|gb|AAK63870.1|AF389298_1 AT5g45130/K17O22_15 [Arabidopsis thaliana]
gi|16484|emb|CAA41863.1| RHA1 [Arabidopsis thaliana]
gi|397594|emb|CAA80534.1| GTP-binding protein [Arabidopsis thaliana]
gi|9758988|dbj|BAB09498.1| ras-related GTP-binding protein RHA1 [Arabidopsis thaliana]
gi|20453279|gb|AAM19878.1| AT5g45130/K17O22_15 [Arabidopsis thaliana]
gi|297311113|gb|EFH41537.1| hypothetical protein ARALYDRAFT_494466 [Arabidopsis lyrata subsp.
lyrata]
gi|332007825|gb|AED95208.1| Ras-related protein RHA1 [Arabidopsis thaliana]
Length = 200
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 18/173 (10%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ K+ LLGD GK+S V ++V ++ QE ++ G ++TL V A + F IWD
Sbjct: 9 INAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTI---GAAFFSQTLAVNDATVKFEIWD 65
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKF 212
G R P+ + A A + +FD+T++ + W E + + N + L G K
Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D D + A +A YA+ + +LFF +SA NV IF I +L
Sbjct: 126 DLL-----DARKVSAEEAEIYAQ--ENSLFFMETSAKTATNVKDIFYEIAKRL 171
>gi|168988599|pdb|2EFC|B Chain B, Ara7-GdpATVPS9A
gi|168988601|pdb|2EFC|D Chain D, Ara7-GdpATVPS9A
gi|168988603|pdb|2EFD|B Chain B, Ara7ATVPS9A
gi|168988605|pdb|2EFD|D Chain D, Ara7ATVPS9A
gi|168988607|pdb|2EFE|B Chain B, Ara7-Gdpnh2ATVPS9A
gi|168988609|pdb|2EFE|D Chain D, Ara7-Gdpnh2ATVPS9A
gi|168988611|pdb|2EFH|B Chain B, Ara7-GdpATVPS9A(D185N)
gi|168988613|pdb|2EFH|D Chain D, Ara7-GdpATVPS9A(D185N)
gi|453056092|pdb|4G01|B Chain B, Ara7-gdp-ca2+/vps9a
Length = 181
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 18/173 (10%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ K+ LLGD GK+S V ++V ++ QE ++ G ++TL V A + F IWD
Sbjct: 11 INAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTI---GAAFFSQTLAVNDATVKFEIWD 67
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKF 212
G R P+ + A A + +FD+T++ + W E + + N + L G K
Sbjct: 68 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKS 127
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D D + A A+ YA+ + LFF +SA NV +IF I +L
Sbjct: 128 DLL-----DARKVTAEDAQTYAQ--ENGLFFMETSAKTATNVKEIFYEIARRL 173
>gi|388491226|gb|AFK33679.1| unknown [Lotus japonicus]
Length = 200
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 22/175 (12%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ K+ LLGD GK+S V ++V + QE ++ G ++TL V A + F IWD
Sbjct: 9 LNAKLVLLGDMGTGKSSLVLRFVKGQFLEFQESTI---GAAFFSQTLAVNDATVKFEIWD 65
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKF 212
G R P+ + A A + ++D+TS + W E +K N + L G K
Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVVALAGNKS 125
Query: 213 D--DFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D D ++ P+ +AR YA+ LFF +SA NVN +F I +L
Sbjct: 126 DLEDKRKVTPE-------EARVYAE--DNGLFFMGTSAKTAANVNDVFYEIAKRL 171
>gi|348522271|ref|XP_003448649.1| PREDICTED: ras-related protein Rab-35-like [Oreochromis niloticus]
Length = 201
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ ++GD +GK+S + ++ N S + G++ +T+ + G ++ IWD G
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R + ++ ++D+TS + ++ W E + IL+G K DD
Sbjct: 69 RFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDD---- 124
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 259
P+ + T A+ +A+ M +LF +SA N+NV ++F I
Sbjct: 125 -PNSKVVETTDAQKFAEQMGISLFETSAKENVNVEEMFNCI 164
>gi|148908627|gb|ABR17422.1| unknown [Picea sitchensis]
Length = 198
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
+S K+ LLGD GK+S V ++V G E G ++TL + I F IWD G
Sbjct: 6 MSAKLVLLGDMGAGKSSMVLRFVRGQFFEYQESTIGAAFFSQTLALNETTIKFEIWDTAG 65
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFDDF 215
R P+ + A A + ++D+TS + N W E R+ N + L G K D
Sbjct: 66 QERYHSLAPMYYRGAAAAIVVYDITSLDSFNRAKKWVQELQRQGNPNMVMTLAGNKADLT 125
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIF 256
+ +L+ +A+AY A + LFF +SA NVN++F
Sbjct: 126 AKRKVELE-----EAQAY--ATENGLFFIETSAKTAQNVNELF 161
>gi|225706608|gb|ACO09150.1| Ras-related protein Rab-35 [Osmerus mordax]
gi|225717328|gb|ACO14510.1| Ras-related protein Rab-35 [Esox lucius]
Length = 201
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ ++GD +GK+S + ++ N S + G++ +T+ + G ++ IWD G
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R + ++ ++D+TS + ++ W E + IL+G K DD
Sbjct: 69 RFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDD---- 124
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 259
P+ + T A+ +A+ M LF +SA NINV ++F I
Sbjct: 125 -PNSKVVETTDAQKFAEQMGINLFETSAKENINVEEMFNCI 164
>gi|170583481|ref|XP_001896599.1| ras-related protein Rab-21 [Brugia malayi]
gi|158596123|gb|EDP34522.1| ras-related protein Rab-21, putative [Brugia malayi]
Length = 219
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 22/179 (12%)
Query: 94 TDSDLVSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSI 151
T S L + KI LLG+ +GKTS ++YV N+ + + + ++K L V G + +I
Sbjct: 10 TSSSLFNFKIVLLGEGAVGKTSLMLRYVENKFSPQHVSTLQASFLSKKLHVDGQTVVLNI 69
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK------WNQTAIP 205
WD G + PI +D+ L ++D+T + + +ARK
Sbjct: 70 WDTAGQEKFHALGPIYYRDSHGALLIYDVTDSHS-------FEKARKNELKRMLGDDVYL 122
Query: 206 ILIGTKFDDFVRLPPDLQWTIAT-QARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
++IG K D + + T +A YAK++ A F +SA NI V ++F +++ L
Sbjct: 123 MIIGNKMD------LERNRNVNTDEAIGYAKSIGAKYFETSAKDNIGVTQVFDYLVKGL 175
>gi|126335536|ref|XP_001367034.1| PREDICTED: ras-related protein Rab-26-like [Monodelphis domestica]
Length = 261
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 25/177 (14%)
Query: 99 VSLKISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKTLMVQGARIAFSIWDVG 155
V+ K+ L+GD +GKT + + + + G++ NK L V G ++ IWD
Sbjct: 67 VAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLNVDGVKVKLQIWDTA 126
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQT-AIPILIGTKFDD 214
G R +DA A+L ++D+T+R + ++I W +E ++ Q + +L+G K D
Sbjct: 127 GQERFRSVTHAYYRDAHALLLLYDVTNRASFDNIQAWLTEIHEYAQKDVVLMLLGNKVD- 185
Query: 215 FVRLPPDLQWTIATQARA--------YAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
+TQ R AK +SA +NV+ FK I +L
Sbjct: 186 ------------STQERVVKREDGEKLAKEYGVPFMETSAKTGLNVDLAFKAIAKEL 230
>gi|154147600|ref|NP_001093711.1| RAB31, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|134023906|gb|AAI35942.1| rab31 protein [Xenopus (Silurana) tropicalis]
Length = 194
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 8/166 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDS 158
LK+ LLGD +GK+S V ++V + + ++ G + + KT+ F IWD G
Sbjct: 6 LKVCLLGDTGVGKSSIVSRFVQDHFDHNISPTIGASFMTKTVPSGNELHKFLIWDTAGQE 65
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDFVR 217
R P+ + + A + ++D+T + T +++ W E ++ I + I G K D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDTFHTLKKWVKELKEHGPENIVMAIAGNKCD---- 121
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D + AR YA+++ A + +SA + INV ++F+ I ++
Sbjct: 122 -LSDTREVTMKDAREYAESIGAIVVETSAKNAINVEELFQGISRRI 166
>gi|125580167|gb|EAZ21313.1| hypothetical protein OsJ_36965 [Oryza sativa Japonica Group]
gi|218187297|gb|EEC69724.1| hypothetical protein OsI_39224 [Oryza sativa Indica Group]
Length = 198
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
K+ LLGD GK+S V ++V + QE ++ G ++TL V + F IWD G
Sbjct: 13 KLVLLGDVGTGKSSLVLRFVKGQFVEFQESTI---GAAFFSQTLAVNDETVKFEIWDTAG 69
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFD-- 213
R P+ + A A + ++D+T+ + W E + + N I L G K D
Sbjct: 70 QERYHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGNKADMV 129
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKLF 264
+ ++P A +A+ YA+ + LFF +SA INVN +F I +L
Sbjct: 130 EARQVP-------AEEAKTYAQ--ENGLFFMETSAKTAINVNDVFHEIAKRLL 173
>gi|324512193|gb|ADY45056.1| Ras-related protein Rab-21 [Ascaris suum]
Length = 239
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 91/182 (50%), Gaps = 8/182 (4%)
Query: 81 LVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINK 138
LV R ++ + + + K+ LLG+ +GK+S ++YV N+ R + + + K
Sbjct: 17 LVTFHRMEAAASTSANTSFTFKVVLLGEGAVGKSSLMLRYVENKFNPRHISTIQASFLCK 76
Query: 139 TLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK 198
++V G + +IWD G + PI +D+ L ++D+T + + W E R+
Sbjct: 77 KIVVDGNAVILNIWDTAGQEKFHALGPIYYRDSHGALLIYDITDLHSFEKVKSWVKELRR 136
Query: 199 -WNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 257
++ + +++G K D + +++ A + YAK++ A +SA +N+ +N+ F+
Sbjct: 137 ILGESVVLLIVGNKTD--LERNRNVERQTALE---YAKSVGADHCETSAKNNVGINEAFE 191
Query: 258 FI 259
+
Sbjct: 192 LL 193
>gi|1370178|emb|CAA98166.1| RAB5A [Lotus japonicus]
gi|388504250|gb|AFK40191.1| unknown [Lotus japonicus]
Length = 200
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ K+ LLGD GK+S V ++V + QE ++ G ++TL V A + F IWD
Sbjct: 9 LNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTI---GAAFFSQTLAVNDATVKFEIWD 65
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKF 212
G R P+ + A A + ++D+TS + W E +K N + G K
Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMAFAGNKS 125
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D D + A +AR YA+ + LFF +SA NVN +F I +L
Sbjct: 126 D-----LEDKRKVTADEARVYAE--ENGLFFMETSAKTAANVNDVFYEIAKRL 171
>gi|406695666|gb|EKC98968.1| putative Ras-related protein Rab-18 [Trichosporon asahii var.
asahii CBS 8904]
Length = 222
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 100 SLKISLLGDCQIGKTS-FVKYVGNE---QERSLQMAGLNLINKTLMVQGARIAFSIWDVG 155
+LK+ L+G+ +GK+S +++ ++ +E + G++ K++ V G R SIWD
Sbjct: 12 NLKLLLIGNSSVGKSSLLLRFTDDDFLSEEETAATIGVDFKVKSVEVDGRRYKLSIWDTA 71
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFDD 214
G R + A ++ ++D++ R T + ++ W+ E + + + I++G K D
Sbjct: 72 GQERFRTLTSSYYRGAQGVILVYDVSQRNTFDELIKWFREIETYCAEDVVKIIVGNKVDK 131
Query: 215 FV-----RLPPDLQWT---IATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
R ++T + +A+A M SA + VN F+ ++ ++
Sbjct: 132 VTLVAMRRADESQEFTRQVTTEEGQAFADRMGTLFMECSAKTRVGVNDAFQELVRRILET 191
Query: 267 P--WT 269
P WT
Sbjct: 192 PSLWT 196
>gi|449455421|ref|XP_004145451.1| PREDICTED: ras-related protein RABF2b-like [Cucumis sativus]
Length = 199
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 18/173 (10%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ K+ LLGD GK+S V ++V + QE ++ G ++TL V A + F IWD
Sbjct: 9 INAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTI---GAAFFSQTLAVNDATVKFEIWD 65
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKF 212
G R P+ + A A + ++D+T++ + + W E + + N + L G K
Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQGSFDRAKKWVQELQAQGNPNMVMALAGNKS 125
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D D + A A+ YA+ + LFF +SA NVN IF I +L
Sbjct: 126 DLL-----DSRKVAAEDAQTYAQ--ENGLFFMETSAKSAANVNDIFYEIAKRL 171
>gi|359478027|ref|XP_002264559.2| PREDICTED: ras-related protein RABA5c-like isoform 2 [Vitis
vinifera]
Length = 302
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 8/181 (4%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGA 145
FS D + + K+ ++GD +GK++ + +Y NE S G+ +++ + G
Sbjct: 85 FSIMEDEEGEEYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGK 144
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP 205
+ IWD G R + AV L ++D++ R T +S+ W E + ++T +
Sbjct: 145 EVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVA 204
Query: 206 -ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
+L+G K D +++ + ++ A+A +SA + NV K F+ ++ +++
Sbjct: 205 RMLVGNKSD-----LENIRDVSVEEGKSLAEAEGLFFIETSALDSTNVKKAFEIVIREIY 259
Query: 265 N 265
N
Sbjct: 260 N 260
>gi|357491715|ref|XP_003616145.1| GTP binding protein [Medicago truncatula]
gi|355517480|gb|AES99103.1| GTP binding protein [Medicago truncatula]
Length = 200
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ K+ LLGD GK+S V ++V + QE ++ G ++TL V A + F IWD
Sbjct: 9 LNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTI---GAAFFSQTLAVNDATVKFEIWD 65
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKF 212
G R P+ + A A + ++D+T+ + W E +K N + G K
Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNLESFTRAKKWVQELQKQGNPNMVVAFAGNKA 125
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D D + A +AR YA+ + LFF +SA NVN IF I KL
Sbjct: 126 D-----LEDKRKVTAEEARVYAE--ENGLFFIETSAKTAANVNDIFYEIAKKL 171
>gi|326381131|ref|NP_001191951.1| ras-related protein Rab-21-like [Acyrthosiphon pisum]
Length = 226
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +Y ++ ++ + + + K L + G RI SIWD G
Sbjct: 19 SFKVVLLGEGCVGKTSLVLRYTEDKFNDKHVSTLQASFVKKKLNLNGRRINLSIWDTAGQ 78
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDFV 216
R PI + + + ++D+T + + W E +K + I ++I G K D
Sbjct: 79 ERFHALGPIYYRMSNGAILVYDITDEDSFQKVKNWIKELKKMLGSEICLVIAGNKID--- 135
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L D ++ A YA ++ A F +SA N + +IF
Sbjct: 136 -LEKDRTVSLE-DAEKYASSVGAVHFHTSAKMNSGIEEIF 173
>gi|147784781|emb|CAN66526.1| hypothetical protein VITISV_043978 [Vitis vinifera]
Length = 215
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 90/179 (50%), Gaps = 14/179 (7%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFS 150
D + + K+ ++GD +GK++ + +Y NE S G+ +++ + G +
Sbjct: 3 DEEGEEYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKAQ 62
Query: 151 IWDVGGDSRSFDHVPIA-CKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILI 208
IWD G R F V A + AV L ++D++ R T +S+ W E + ++T + +L+
Sbjct: 63 IWDTAGQER-FRAVTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLV 121
Query: 209 GTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKLFN 265
G K D +++ + ++ A+A LFF +SA + NV K F+ ++ +++N
Sbjct: 122 GNKSD-----LENIRDVSVEEGKSLAEA--EGLFFIETSALDSTNVKKAFEIVIREIYN 173
>gi|427787329|gb|JAA59116.1| Putative rab-protein 3 [Rhipicephalus pulchellus]
Length = 221
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQERS--LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI ++G+ +GKTSF+ ++ S + G++ KT+ R+ IWD G
Sbjct: 22 FKILIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQE 81
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWN-QTAIPILIGTKFDDFVR 217
R + A+ + M+D+T+ + NS+ W ++ + ++ A IL+G K D
Sbjct: 82 RYRTITTAYYRGAMGFILMYDVTNEESFNSVQDWVTQIKTYSWDNAQVILVGNKCD---- 137
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 257
D + A + R A + F +SA N+NV +F+
Sbjct: 138 -MEDERVVSAERGRQLADQLGLEFFETSAKENVNVKAVFE 176
>gi|145508972|ref|XP_001440430.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834482|emb|CAI44559.1| rab_A51 [Paramecium tetraurelia]
gi|124407647|emb|CAK73033.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 75/147 (51%), Gaps = 16/147 (10%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
K+ LG+ +GKTS + ++V N +S G++ I K + + G + +WD G R
Sbjct: 10 KLVFLGNSYVGKTSIIERFVSNTFDPKSQPTVGIDFIGKNITIDGKNMRLLLWDTAGQER 69
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR--KWNQTAIPILIGTKFDDFVR 217
+P +DA + +FD+TSR + S+ W++E + + N+ AI IL G K
Sbjct: 70 FHSLIPGYVRDAQCAIIVFDVTSRHSFESLDRWFNEVKQTRGNEAAIVIL-GNKI----- 123
Query: 218 LPPDLQWTIATQ-ARAYAKAMKATLFF 243
D + I++Q AR Y AMK + +
Sbjct: 124 ---DAERVISSQEARDY--AMKKDILY 145
>gi|407039313|gb|EKE39573.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 201
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 2/167 (1%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
+K+ +LG+ GKT + +++ NE R G +KT+ I + +WD G R
Sbjct: 33 IKVVVLGEMGTGKTCILHRWISNEFVRQTATVGCAFSSKTITYNKRIIKYELWDAAGQER 92
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLP 219
I ++A L ++D+T R T N++ W +E + I ILI DD
Sbjct: 93 YRSLSSIYYRNATVALLVYDITKRETFNAVTDWVAELKSNTTNDIMILIVGNKDDLQEER 152
Query: 220 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
Q ++ + + L S+ T N N+N+IF I KL L
Sbjct: 153 EVNQNSVNDFINSCNSNIIGNLECSAKTGN-NINQIFDIISEKLLEL 198
>gi|195963429|ref|NP_001124395.1| rab-like protein 2B isoform 3 [Homo sapiens]
Length = 238
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 28/184 (15%)
Query: 92 YDTDSDLVSLKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAF 149
YD D ++ KI LGD +GK+ ++ + Q + L L L T V G I
Sbjct: 16 YDADDNV---KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILV 72
Query: 150 SIWDVGGDSR------SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTA 203
WD G R S+ H AC + +FD+ + T ++ WY+E R++
Sbjct: 73 DFWDTAGQERFQSMHASYYHKAHAC------IMVFDVQRKVTYRNLSTWYTELREFRPEI 126
Query: 204 IPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF--KFIMA 261
I++ K DD + ++ +AK L+F SA NV K++ + +
Sbjct: 127 PCIVVANKIDDI---------NVTQKSFNFAKKFSLPLYFVSAADGTNVVKVWLTAEVAS 177
Query: 262 KLFN 265
KLFN
Sbjct: 178 KLFN 181
>gi|303390262|ref|XP_003073362.1| Rab5-like GTPase [Encephalitozoon intestinalis ATCC 50506]
gi|303302508|gb|ADM12002.1| Rab5-like GTPase [Encephalitozoon intestinalis ATCC 50506]
Length = 197
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 77/176 (43%), Gaps = 8/176 (4%)
Query: 91 GYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIA 148
G D + K+ +LG +GK+S V KYV E G + + KT+ I
Sbjct: 3 GIKEDMKTYTFKMVVLGYYSVGKSSLVLKYVKGEFNPNEESTIGASFLTKTVFTPEGSIK 62
Query: 149 FSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPIL 207
F IWD G R +P+ + A L ++D+TS + + W E + + + I +L
Sbjct: 63 FEIWDTAGQERYNSLIPMYYRGAQVALIVYDITSVESFETAKRWVEELSFEKPREFIKVL 122
Query: 208 IGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
IG K D L D + Q + YA + F SSA N+ +IF I K+
Sbjct: 123 IGNKSD----LEEDRKVEFQ-QGKEYADSQNLLFFESSAKTGKNIAEIFNAIAEKV 173
>gi|67473906|ref|XP_652702.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469581|gb|EAL47316.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790106|dbj|BAD82849.1| small GTPase EhRabN1 [Entamoeba histolytica]
gi|449702611|gb|EMD43216.1| small GTPase EhRabN1, putative [Entamoeba histolytica KU27]
Length = 201
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 2/167 (1%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
+K+ +LG+ GKT + +++ NE R G +KT+ I + +WD G R
Sbjct: 33 IKVVVLGEMGTGKTCILHRWISNEFVRQTATVGCAFSSKTVTYNKRIIKYELWDAAGQER 92
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLP 219
I ++A L ++D+T R T N++ W +E + I ILI DD
Sbjct: 93 YRSLSSIYYRNATVALLVYDITKRETFNAVTDWVAELKSNTTNDIMILIVGNKDDLQEER 152
Query: 220 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
Q ++ + + L S+ T N N+N+IF I KL L
Sbjct: 153 EVNQNSVNDFINSSNSNIIGNLECSAKTGN-NINQIFDIISEKLLEL 198
>gi|307177872|gb|EFN66832.1| Ras-related protein RabJ [Camponotus floridanus]
Length = 217
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 9/167 (5%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRS 160
K+ LLG +GKTS + +Y+GN S + G + N L + +I +WD G R
Sbjct: 7 KVVLLGSQGVGKTSLIGRYIGNFDNVSPTI-GASFFNCKLNLGDMKIKLHVWDTAGQERF 65
Query: 161 FDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKFDDFVRLP 219
P+ ++A A + +FDLT + +I GW E ++ T + +IG K D R
Sbjct: 66 RSMAPMYYRNANAAMLVFDLTQYNSFAAIKGWVKELQQNVEDTMVLAVIGNKSDLHQR-- 123
Query: 220 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+ + YA ++ AT S HN V +F I L +
Sbjct: 124 ----QVDGEEGQKYATSIGATYHEISVLHNEGVETVFLAIAKGLLRM 166
>gi|198418761|ref|XP_002119635.1| PREDICTED: similar to Ras-related protein Rab-21 [Ciona
intestinalis]
Length = 218
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 8/169 (4%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
K+ LLG+ +GKTS V +Y ++ ++ + + +NK L + G R+ SIWD G R
Sbjct: 9 KVVLLGEGCVGKTSLVLRYCEDKFNDKHITTLQASFLNKKLNIGGKRVNLSIWDTAGQER 68
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDFVRL 218
PI +D+ + ++D+T + + W E RK I + I G K D L
Sbjct: 69 FHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGQDICLCIAGNKID----L 124
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLP 267
++ +A YA ++ A +SA N ++ +F + K+ +
Sbjct: 125 EKSRHVSV-QEAEEYAASVGAKHVHTSAKLNKGIDDVFLTLSKKMMQVS 172
>gi|56753826|gb|AAW25110.1| SJCHGC06157 protein [Schistosoma japonicum]
Length = 211
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 11/173 (6%)
Query: 98 LVSLKISLLGDCQIGKTSFVKYVGNEQERSLQMAGLNLINKTLMV---QGARIAFSIWDV 154
L++ K+ L+GD +GK+S + N+ S A + + K +V G +I SIWD
Sbjct: 9 LINFKLLLIGDSGVGKSSLLMRYTNDCFESQLSATIGVDFKVKLVTVPDGTKIKLSIWDT 68
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW--NQTAIPILIGTKF 212
G R P + + A +F++D+ +R + +++ W E + + N I +L+G K
Sbjct: 69 AGQERFRTLTPNVYRGSHAAVFVYDVANRESFDNLKIWMEELKTYSDNPNMIKLLVGNKI 128
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
D RL + +A+ +SA + VN++F I+ K+FN
Sbjct: 129 DSVPRLIS------REEGLRFARLYNMPYAETSAKTSEGVNQLFSDIVTKIFN 175
>gi|116182662|ref|XP_001221180.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88186256|gb|EAQ93724.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 201
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 71/170 (41%), Gaps = 17/170 (10%)
Query: 95 DSDLVSLKISLLGDCQIGKTSFVKYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDV 154
++ K+ LLG+ +GK+S V L + + + + F IWD
Sbjct: 13 NNRFAQFKLVLLGESAVGKSSIV---------------LRFVKTISLDENTTVKFEIWDT 57
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFD 213
G R P+ ++A + ++D+T +L+ W E R+ N+ I L G K
Sbjct: 58 AGQERYKSLAPMYYRNANCAVVVYDITQATSLDKAKSWVKELQRQANENIIIALAGNKL- 116
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D V PD + A AYAK F +SA NV ++F I KL
Sbjct: 117 DLVTEQPDKRAIETADAEAYAKEAGLLFFETSAKTAENVQELFTAIAKKL 166
>gi|427787355|gb|JAA59129.1| Putative rab-protein 3 [Rhipicephalus pulchellus]
Length = 221
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQERS--LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI ++G+ +GKTSF+ ++ S + G++ KT+ R+ IWD G
Sbjct: 22 FKILIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQE 81
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWN-QTAIPILIGTKFDDFVR 217
R + A+ + M+D+T+ + NS+ W ++ + ++ A IL+G K D
Sbjct: 82 RYRTITTAYYRGAMGFILMYDVTNEESFNSVQDWVTQIKTYSWDNAQVILVGNKCD---- 137
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 257
D + A + R A + F +SA N+NV +F+
Sbjct: 138 -MEDERVVSAERGRQLADQLGLEFFETSAKENVNVKAVFE 176
>gi|159478240|ref|XP_001697212.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158274686|gb|EDP00467.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 229
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 13/187 (6%)
Query: 100 SLKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGAR-IAFSIWDVGG 156
++KI LLGD +GK+ V+ + N + L L L Q A+ +A IWD G
Sbjct: 23 AIKIILLGDSAVGKSKLVERFLLDNYKPHQLSTYALTLYRYNFKTQDAKTVACDIWDTAG 82
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
R A A + +FD+T + T ++ WY E + N IP L+ V
Sbjct: 83 QERFNSMHSSYYYRAHACIMVFDVTRKVTYKNLEKWYDELQD-NCKGIPTLV-------V 134
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTI 276
D+ + + +++ +A K FF SA+ NV KIF MA + + W
Sbjct: 135 ANKIDIDYKVTSKSFNFAAKRKLPFFFVSASDGTNVVKIFN--MAIMAGMRWKAAPKDDF 192
Query: 277 GEPIIDF 283
+ ++D
Sbjct: 193 YQEVLDL 199
>gi|45360657|ref|NP_989002.1| uncharacterized protein LOC394598 [Xenopus (Silurana) tropicalis]
gi|38174213|gb|AAH61274.1| hypothetical protein MGC75714 [Xenopus (Silurana) tropicalis]
Length = 201
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 7/158 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK+S + ++ N S + G++ +TL++ G R+ IWD G
Sbjct: 10 FKLLLIGDSGVGKSSLLLRFSDNSFSGSYITTIGVDFKIRTLVLDGERVKLQIWDTAGQE 69
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R ++ ++ ++D+TS + ++ W E + + +L+G K DD
Sbjct: 70 RFRTITSTYYRNTHGVIVVYDVTSPESFVNVKRWLHEITQNCDSVCTVLVGNKDDD---- 125
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
P + A A+ +A M +F +SA N NV ++F
Sbjct: 126 -PSRKRVEAADAKRFADQMGVRMFETSAKENRNVEEMF 162
>gi|410981792|ref|XP_003997250.1| PREDICTED: ras-related protein Rab-37 [Felis catus]
Length = 340
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 9/147 (6%)
Query: 71 SPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERS--- 127
S A T + E S S YD V+ K+ LLGD +GKT F+ + S
Sbjct: 122 SGAAATRDGEAPEHSPPCSPSYD-----VTGKVMLLGDSGVGKTCFLIQFKDGAFLSGTF 176
Query: 128 LQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLN 187
+ G++ NK + V G R+ IWD G R +DA A+L ++D+T++ + +
Sbjct: 177 IATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFD 236
Query: 188 SIVGWYSEARKWNQTAIPI-LIGTKFD 213
+I W +E ++ Q + I L+G K D
Sbjct: 237 NIRAWLTEIHEYAQRDVVIMLLGNKAD 263
>gi|355754356|gb|EHH58321.1| hypothetical protein EGM_08143, partial [Macaca fascicularis]
Length = 192
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 103 ISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
+ LLGD +GKT F+ + S + G++ NK + V G R+ IWD G R
Sbjct: 1 VMLLGDSGVGKTCFLIRFKDGAFLSGAFIATVGIDFRNKVVTVDGMRVKLQIWDTAGQER 60
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
+DA A+L ++D+TS+ + +SI W +E ++ Q + I L+G K D
Sbjct: 61 FRSVTHAYYRDAQALLLLYDITSKSSFDSIRAWLTEIHEYAQRDVVIMLLGNKAD 115
>gi|294921841|ref|XP_002778737.1| Rab2, putative [Perkinsus marinus ATCC 50983]
gi|239887457|gb|EER10532.1| Rab2, putative [Perkinsus marinus ATCC 50983]
Length = 381
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 15/176 (8%)
Query: 99 VSLKISLLGDCQIGKT----SFVKYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDV 154
+ LKI ++GD GK+ F+ V N+Q S G+ +K + V R+ IWD
Sbjct: 24 IRLKIIIIGDAGSGKSCIIRQFLDGVFNDQ--SEHTIGVEFASKVIKVNSKRVKLQIWDT 81
Query: 155 GGDSRSFDHVPIA---CKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILI-G 209
G R + + A ++ ++D+TSR + N + GW +AR + Q + ++I G
Sbjct: 82 AGQQRCTGYRSVTRSYYGGAAGVVLLYDITSRESYNHLPGWLQDARCQTGQKDLSVVILG 141
Query: 210 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
K D L D + +A +A+ A +SA V ++F+ + ++FN
Sbjct: 142 NKKD----LGSDQREVSFLEASRFAQENSALFMETSAATGEGVQEVFRTLTTRIFN 193
>gi|194387154|dbj|BAG59943.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 15/217 (6%)
Query: 57 VRYQKLTRR-SSSESSPAP-DTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKT 114
VR KL R + + + P P DT A + L D + D + K+ L+GD +GK+
Sbjct: 12 VRQLKLGARVTPAATPPGPTDTTAAPALSLLGRAMGTRDDEYDYL-FKVVLIGDSGVGKS 70
Query: 115 SFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAV 172
+ + ++ NE S G+ +++ V G I IWD G R + AV
Sbjct: 71 NLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAV 130
Query: 173 AILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DFVRLPPDLQWTIATQ 229
L ++D+ T ++ W E R + I I L+G K D +P D +
Sbjct: 131 GALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTD-------E 183
Query: 230 ARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
ARA+A+ + +SA + NV F+ I+ +++ +
Sbjct: 184 ARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 220
>gi|15217568|ref|NP_172434.1| Ras-related protein RABA2a [Arabidopsis thaliana]
gi|3024516|sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a; AltName:
Full=Ras-related protein Rab11C; Short=AtRab11C; Flags:
Precursor
gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs
gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene
[Arabidopsis thaliana]
gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana]
gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana]
gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|332190350|gb|AEE28471.1| Ras-related protein RABA2a [Arabidopsis thaliana]
Length = 217
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 8/169 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +TL V+G + IWD G
Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQE 72
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVR 217
R + A+ L ++D+T T ++ W E R + I I LIG K D
Sbjct: 73 RYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTD---- 128
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
L+ A++YA+ + +SA +NV K F+ I+++++ +
Sbjct: 129 -LKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRI 176
>gi|326521104|dbj|BAJ96755.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 85/178 (47%), Gaps = 11/178 (6%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFS 150
D + D + KI L+GD +GK++ + ++ NE S G+ +TL ++G +
Sbjct: 6 DNEYDYL-FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTVKAQ 64
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 209
IWD G R + AV L +FD+T R T +++ W E R I + ++G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVMMVG 124
Query: 210 TKFD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
K D + +R P+ ++A+++ + +SA INV K F +++++ +
Sbjct: 125 NKSDLNHLRSVPE------EDSQAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQI 176
>gi|195643312|gb|ACG41124.1| ras-related protein RHN1 [Zea mays]
Length = 203
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
K+ LLGD GK+S V ++V + QE ++ G ++TL V + F IWD G
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTI---GAAFFSQTLAVNDETVKFEIWDTAG 69
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFDDF 215
R P+ + A A + ++D+T+ + W E + + N I L G K D
Sbjct: 70 QERYHSLAPMYYRGAAAAIVVYDITNPASTTCTKKWVQELQAQGNPNTIVALAGNKVDML 129
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKLF 264
D + +A+ YA+ + LFF +SA INVN IF I +L
Sbjct: 130 -----DARHVAVEEAKTYAQ--ENGLFFMETSAKTAINVNDIFYEIAKRLL 173
>gi|115489706|ref|NP_001067340.1| Os12g0631100 [Oryza sativa Japonica Group]
gi|12057010|emb|CAC19792.1| RAB5A protein [Oryza sativa Indica Group]
gi|108863007|gb|ABG22102.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113649847|dbj|BAF30359.1| Os12g0631100 [Oryza sativa Japonica Group]
gi|215686475|dbj|BAG87736.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
K+ LLGD GK+S V ++V + QE ++ G ++TL V + F IWD G
Sbjct: 13 KLVLLGDVGTGKSSLVLRFVKGQFVEFQESTI---GAAFFSQTLAVNDETVKFEIWDTAG 69
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFD-- 213
R P+ + A A + ++D+T+ + W E + + N I L G K D
Sbjct: 70 QERYHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGNKADMV 129
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKLF 264
+ ++P A +A+ YA+ + LFF +SA INVN +F I +L
Sbjct: 130 EARQVP-------AEEAKTYAQ--ENGLFFMETSAKTAINVNDVFHEIAKRLL 173
>gi|380022458|ref|XP_003695062.1| PREDICTED: ras-related protein RabJ-like isoform 1 [Apis florea]
Length = 221
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 8/171 (4%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNEQERSLQ-MAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
K+ LG +GKTS + +Y+G L G + L ++ ARI +WD G R
Sbjct: 7 KVVALGSQGVGKTSIIMRYIGKSCNEHLSPTIGASFFTCKLNLENARIMLRVWDTAGQER 66
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFDDFVRL 218
P+ ++A A + +FDLT T ++ W +E R+ + + ++IG K D L
Sbjct: 67 FRSMAPMYYRNANAAMLVFDLTQYNTFAAMKRWVTELRRNVEEVMTLVVIGNKSD----L 122
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWT 269
+ Q A + R YA + A+ + +S N + +F I L L T
Sbjct: 123 TKERQ-VDAEEGRVYATKIGASYYETSVLQNEGIKNVFLAIGNGLLKLSST 172
>gi|332814186|ref|XP_001152747.2| PREDICTED: LOW QUALITY PROTEIN: RAB, member of RAS oncogene
family-like 2A isoform 5 [Pan troglodytes]
Length = 229
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 92 YDTDSDLVSLKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAF 149
YD D ++ KI LGD +GK+ ++ + Q + L L L T MV G I
Sbjct: 16 YDADDNV---KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTAMVDGKTILV 72
Query: 150 SIWDVGGDSR------SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTA 203
WD G R S+ H AC + +FD+ + T ++ WY+E R++
Sbjct: 73 DFWDTAGQERFQSMHASYYHKAHAC------IMVFDVQRKVTYRNLSTWYTELREFRPEI 126
Query: 204 IPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
I++ K D + + ++ ++AK L+F SA NV K+F
Sbjct: 127 PCIVVANKIDADI--------NVTQKSFSFAKKFSLPLYFVSAADGTNVVKLF 171
>gi|378756664|gb|EHY66688.1| rab-protein 10 [Nematocida sp. 1 ERTm2]
Length = 208
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 78/164 (47%), Gaps = 4/164 (2%)
Query: 97 DLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDV 154
+ + LK+ ++G+ +GKTS + +++ N+ E++ G++ +K + V G I IWD
Sbjct: 4 ECLQLKLLIIGESNVGKTSILQRFIDNKFEKTFSTTIGIDFRSKAIKVDGKEIELQIWDT 63
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
G R F + + I FDLTS + S+ W E ++ +P+ L+G K D
Sbjct: 64 AGQERFFSITRSYYRGSDGIFLTFDLTSESSFASLTKWIGEIKEKVDEKVPVFLLGNKKD 123
Query: 214 DFVRLPPDLQ-WTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
++ + + ++ +K + +SA N+ +IF
Sbjct: 124 LLKGSESEINLLATVNRIKEISEELKVPWYSTSAKSGENIEEIF 167
>gi|301768909|ref|XP_002919871.1| PREDICTED: ras-related protein Rab-37-like isoform 1 [Ailuropoda
melanoleuca]
Length = 223
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 9/147 (6%)
Query: 71 SPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERS--- 127
S A T + E S S YD ++ K+ LLGD +GKT F+ + S
Sbjct: 5 SGAAATRDGEAPERSPPCSPSYD-----LTGKVMLLGDSGVGKTCFLIQFKDGAFLSGTF 59
Query: 128 LQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLN 187
+ G++ NK + V G R+ IWD G R +DA A+L ++D+T + + +
Sbjct: 60 IATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITDKSSFD 119
Query: 188 SIVGWYSEARKWNQTAIPI-LIGTKFD 213
+I W +E ++ Q + I L+G K D
Sbjct: 120 NIRAWLTEIHEYAQRDVVIMLLGNKAD 146
>gi|300120200|emb|CBK19754.2| unnamed protein product [Blastocystis hominis]
Length = 219
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 8/169 (4%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L K+ LGD +GKTS + +++ + + S Q G++ ++KT+ + + +WD
Sbjct: 20 LEKYKLVFLGDPGVGKTSIITRFMYDTFDSSYQATIGIDFLSKTMYLDDRTVRLQLWDTA 79
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFDD 214
G R +P +D+ + ++DLT+R + + W S+ R + + +L+G K D
Sbjct: 80 GQERFRSLIPSYIRDSSVAVIVYDLTNRTSFENTRKWLSDVRVERGDDVVIVLVGNKTD- 138
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D + + A AK + +SA N NV +F+ + L
Sbjct: 139 ----LSDSRQVSTNEGEALAKELNVLFIETSAKCNFNVTALFRKVATTL 183
>gi|388513607|gb|AFK44865.1| unknown [Lotus japonicus]
Length = 196
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 8/169 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +TL V+G + IWD G
Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLEVEGRMVKAQIWDTAGQE 72
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVR 217
R + A+ L ++D+T + ++ W E R I I LIG K D
Sbjct: 73 RYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVIMLIGNKTD---- 128
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
L+ A++YA+ + +SA NV+K F+ I+A+++ +
Sbjct: 129 -LKHLRGVATEDAQSYAEKEGLSFIETSALEATNVDKAFQTILAQIYRI 176
>gi|402225252|gb|EJU05313.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 215
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDSR 159
KI LLGD +GKTS + +++ + +++ Q G++ ++KT+ ++ + +WD G R
Sbjct: 20 KIVLLGDQSVGKTSLITRFMYDTFDQTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 79
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFDDFVRL 218
+P +D+ + +FD+T+R + S W + R + I +L+G K D L
Sbjct: 80 FRSLIPSYIRDSSVAIVVFDITNRASFLSTTKWIDDVRSERGGDVIIVLVGNKAD----L 135
Query: 219 PPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFI 259
D Q TQ A K+ + + + +SA NV +FK I
Sbjct: 136 SNDRQ---VTQEEAQQKSTELDIIYMETSAKAGHNVKTLFKKI 175
>gi|387017964|gb|AFJ51100.1| ras-related protein Rab-35-like [Crotalus adamanteus]
Length = 202
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ ++GD +GK+S + ++ N S + G++ +TL++ G R+ IWD G
Sbjct: 10 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTLVINGERVKLQIWDTAGQE 69
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R ++ ++ ++D+T+ + ++ W E + IL+G K +D R
Sbjct: 70 RFRTITSTYYRNTHGVIIVYDVTNAESFVNVKRWLHEIGQNCDNVCKILVGNKCEDLSRK 129
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 259
+ AR +++ M LF +SA N+NV ++F I
Sbjct: 130 QVE-----TADARRFSEQMGVRLFETSAKENLNVEEMFNAI 165
>gi|392579448|gb|EIW72575.1| hypothetical protein TREMEDRAFT_66953 [Tremella mesenterica DSM
1558]
Length = 246
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 81/199 (40%), Gaps = 32/199 (16%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFS 150
+T V +K+ LLG+ +GK+S V ++V N+ E + G + + ++ + F
Sbjct: 4 ETPMKAVQVKLVLLGEAAVGKSSLVLRFVQNDFNENTSPTIGAAFLTQRCRLENRIVKFE 63
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIG 209
IWD G R P+ ++A A + ++D+T +L W E R+ N I L+G
Sbjct: 64 IWDTAGQERFHSLAPMYYRNAAAAVVVYDITKSASLEKAKAWVKELQRQANPNIIIALVG 123
Query: 210 TKFD---DFVRLPP--------------------------DLQWTIATQARAYAKAMKAT 240
K D D PP D + +A YAK
Sbjct: 124 NKLDLVSDTPSEPPTDGLEVERDEEDEETTPKPAEKTEEGDSRQVSIAEAETYAKECGLL 183
Query: 241 LFFSSATHNINVNKIFKFI 259
F +SA NVN++F I
Sbjct: 184 FFEASAKVGTNVNEVFTEI 202
>gi|193713749|ref|XP_001945092.1| PREDICTED: ras-related protein Rab-43-like isoform 1 [Acyrthosiphon
pisum]
gi|328718639|ref|XP_003246535.1| PREDICTED: ras-related protein Rab-43-like isoform 2 [Acyrthosiphon
pisum]
Length = 235
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 10/168 (5%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GDC GKT V+ G E G++ KT+ + G ++ IWD G
Sbjct: 38 FKIVLIGDCGTGKTCVVQRFKSGTYAENQGNTIGVDFSMKTIKIDGKKVKLQIWDTAGHE 97
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI-PILIGTKFDDFVR 217
R + A +L ++D+T R T ++ W E R++ + + +LIG K D
Sbjct: 98 RFRTITQSYYRSANGVLLVYDITKRATFLNLQRWVEEVRRYTSSNVLLVLIGNKCD---- 153
Query: 218 LPPDLQWTIATQARAYAKAMKATL--FFSSATHNINVNKIFKFIMAKL 263
L + Q ++ +A A + L +SA N N+ + F I ++L
Sbjct: 154 LEENRQVELS-EADAMCEYFPELLSVLETSAKENKNIEEAFVTIASEL 200
>gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human Rab11b Gtpase
gi|93279477|pdb|2F9M|A Chain A, 3d Structure Of Active Human Rab11b Gtpase
Length = 199
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 6 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 65
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R + I I L+G K D
Sbjct: 66 RYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 125
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 126 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 169
>gi|384496634|gb|EIE87125.1| hypothetical protein RO3G_11836 [Rhizopus delemar RA 99-880]
Length = 234
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 18/184 (9%)
Query: 94 TDSDLVSLKISLLGDCQIGKTSFV------KYVGNEQERSLQMAGLNLINKTLMVQGARI 147
T + ++K+ LLG+ +GK+S V +YV N + G +N+ + I
Sbjct: 15 TPGKMKNVKLVLLGESAVGKSSIVLRFVDRQYVENRE----PTIGAAFLNQKCNFKDRSI 70
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 206
F IWD G R P+ +++ A + ++D+T TL+ W E ++ T I I
Sbjct: 71 KFEIWDTAGQERFHSLAPMYYRNSQAAIVVYDITKAATLDKAKSWVKELQRQANTDIVIA 130
Query: 207 LIGTKFD-----DFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFI 259
L+G K D D L + ++ A A A +A L F +SA NV+ +F I
Sbjct: 131 LVGNKLDLVEGEDGEPLEDEEHEREVSKEDAQAYADEAGLLFFETSAKSAQNVDNVFSSI 190
Query: 260 MAKL 263
K+
Sbjct: 191 AQKI 194
>gi|389743618|gb|EIM84802.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 228
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 99 VSLKISLLGDCQIGKTSFVKYVGNEQ----ERSLQMAGLNLINKTLMVQGARIAFSIWDV 154
+++K+ L+G+ +GK+S + +EQ + + G++ + V+G ++ SIWD
Sbjct: 10 INVKLLLIGNSSVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMDVKGKKVKLSIWDT 69
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFD 213
G R + A I+ ++D+++R + +++ W+SE + + + + I++G K D
Sbjct: 70 AGQERFRTITSSYYRGAQGIILVYDVSNRESFDALPRWFSELETYVSSSVVKIIVGNKVD 129
Query: 214 -DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLP 267
++ R P +A +A +SA ++ V F+ ++A++ + P
Sbjct: 130 KEYSRQVP------TAEAEQFAARQNCLFVEASAKTSVGVRDAFRNVVAQILDTP 178
>gi|170087436|ref|XP_001874941.1| GTP binding protein [Laccaria bicolor S238N-H82]
gi|164650141|gb|EDR14382.1| GTP binding protein [Laccaria bicolor S238N-H82]
Length = 213
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDSR 159
KI LLGD +GKTS + +++ + + + Q G++ ++KT+ ++ + +WD G R
Sbjct: 21 KIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 80
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFDDFVRL 218
+P +D+ + +FD+T+R + S W + R + I +L+G K D L
Sbjct: 81 FRSLIPSYIRDSSVAIVVFDITNRQSFLSTTKWIDDVRSERGNDVIIVLVGNKAD----L 136
Query: 219 PPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKLFNLPWTVKRN 273
Q T+ A AK+ + + F +SA NV +FK I +LP K N
Sbjct: 137 SDKRQVTL---EEATAKSTQLNIMFMETSAKAGHNVKSLFKKIA---MSLPGMEKEN 187
>gi|449018630|dbj|BAM82032.1| small GTP-binding protein of Rab family, Rab6 [Cyanidioschyzon
merolae strain 10D]
Length = 211
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 8/173 (4%)
Query: 94 TDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSI 151
T + L K+ LGD +GKTS + +++ ++ + + Q G++ ++KT+ ++ + +
Sbjct: 8 TAAALSKYKLVFLGDQAVGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQL 67
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGT 210
WD G R +P +D+ + ++D+TSR + + W E R + I +L+G
Sbjct: 68 WDTAGQERFRSLIPSYIRDSSVAVVVYDVTSRRSFLNTAKWIEEVRNERGNEVIIVLVGN 127
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
K D D + + A AK + +SA NV +F+ I A L
Sbjct: 128 KSD-----QNDKRQVSVEEGEAKAKELDVLFIETSAKTGANVKALFRKIAAAL 175
>gi|50308977|ref|XP_454494.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643629|emb|CAG99581.1| KLLA0E12079p [Kluyveromyces lactis]
Length = 214
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 11/182 (6%)
Query: 86 RTFSSGYDTDSDLVS-LKISLLGDCQIGKTSF-VKYVGNEQERS-LQMAGLNLINKTLMV 142
RT S+ T+ + S +KI LLGD +GK+ V++V ++ + + G++ KT+ +
Sbjct: 5 RTVSANGSTNKNYDSVMKILLLGDSGVGKSCLLVRFVEDKFTPTFITTIGIDFKIKTVDI 64
Query: 143 QGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQ 201
G R+ +WD G R + A+ I+ ++D+T T +I W+S + ++
Sbjct: 65 NGKRVKLQLWDTAGQERFRTITTAYYRGAMGIVLIYDVTDERTFENIRQWFSTVNQHASE 124
Query: 202 TAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMA 261
+ +L+G K D D + Q A AK + +SA + NV++IF F +A
Sbjct: 125 DVVMLLVGNKKD------MDTRTVSYEQGEALAKELGIPFIEASAKDDTNVSEIF-FTLA 177
Query: 262 KL 263
KL
Sbjct: 178 KL 179
>gi|429327748|gb|AFZ79508.1| Ras family Rab small GTP-binding protein [Babesia equi]
Length = 219
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 5/173 (2%)
Query: 102 KISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTL-MVQGARIAFSIWDVGGDS 158
KI LLGD +GK+ + +Y+ G +S G+ +T+ + G + IWD G
Sbjct: 11 KIILLGDATVGKSHMLCQYIKGTVPSQSKATIGVEFATRTVPLASGGTVKAQIWDTAGQE 70
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVR 217
R + AV L ++D+T+R + ++ W E R I I L+G K D V
Sbjct: 71 RYRSITSAHYRRAVGALLVYDITNRQSFHNCRKWLKELRNAADDDIIITLVGNKV-DLVE 129
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTV 270
L+ QA +A T + +SA + NV +IF+ ++ + ++ V
Sbjct: 130 RDESLRQVHVEQAAKFASENNLTFYEASAVTSYNVKRIFEHLLQDVHDVKSRV 182
>gi|348588935|ref|XP_003480220.1| PREDICTED: ras-related protein Rab-5A-like [Cavia porcellus]
Length = 215
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G +T + + K+ LLG+ +GK+S V ++V G E G +T+ +
Sbjct: 7 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGSCFSTQTVCLDD 66
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q +A++YA+ +SA ++NVN+IF I KL
Sbjct: 127 VIALSGNKADLANKRAVDFQ-----EAQSYAEDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|255683305|ref|NP_001157461.1| ras-related protein Rab-37 isoform 4 [Homo sapiens]
gi|221044570|dbj|BAH13962.1| unnamed protein product [Homo sapiens]
gi|261860674|dbj|BAI46859.1| RAB37, member RAS oncogene family [synthetic construct]
Length = 228
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 102 KISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ LLGD +GKT F+ + S + G++ NK + V G R+ IWD G
Sbjct: 36 KVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQE 95
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
R +DA A+L ++D+T++ + ++I W +E ++ Q + I L+G K D
Sbjct: 96 RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKAD 151
>gi|390597749|gb|EIN07148.1| GTP binding protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 214
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 8/165 (4%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDSR 159
KI LLGD +GKTS + +++ + + + Q G++ ++KT+ ++ + +WD G R
Sbjct: 21 KIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 80
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFDDFVRL 218
+P +D+ + +FD+T+R + S W + R + I +L+G K D L
Sbjct: 81 FRSLIPSYIRDSSVAIVVFDITNRASFLSTSKWIDDVRSERGNDVIIVLVGNKAD----L 136
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
Q T+ +A ++ M +SA NV +FK I L
Sbjct: 137 SDKRQVTLE-EATTKSQEMNVMFMETSAKAGHNVKSLFKKIAMSL 180
>gi|226088538|dbj|BAH37015.1| NtRab11D [Nicotiana tabacum]
Length = 222
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 16/198 (8%)
Query: 88 FSSGYDTDSDLVS--LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQ 143
+SGY S + K+ L+GD +GK+ + ++ NE S G+ +TL++Q
Sbjct: 1 MASGYGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQ 60
Query: 144 GARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQT 202
+ IWD G R + AV + ++D+T R T + I W E R ++
Sbjct: 61 HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRN 120
Query: 203 AIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIM 260
+ +LIG K D D + A+ +A+ K LFF +SA NV F ++
Sbjct: 121 IVIMLIGNKTD-----LEDQRAVPTEDAKEFAQ--KEGLFFLETSAMEATNVEDAFLTVL 173
Query: 261 AKLFNLPWTVKRNLTIGE 278
++FN+ K+NL E
Sbjct: 174 TEIFNI--VNKKNLAADE 189
>gi|196001837|ref|XP_002110786.1| hypothetical protein TRIADDRAFT_49948 [Trichoplax adhaerens]
gi|190586737|gb|EDV26790.1| hypothetical protein TRIADDRAFT_49948 [Trichoplax adhaerens]
Length = 205
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 95 DSDLVSLKISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMVQGARIAFSIW 152
D + +LKI ++G+ +GK+S + ++Q Q A G++ KT+ V+G R+ +IW
Sbjct: 2 DDVIATLKILIIGEAGVGKSSLLLRFTDDQFDPEQSATIGVDFKIKTVNVEGNRVKLAIW 61
Query: 153 DVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW--NQTAIPILIGT 210
D G R P + A ++ ++D + R + + + W +E R + + I +L+G
Sbjct: 62 DTAGQERFRTLTPSYYRGAQGVILVYDTSKRTSFDKLENWLTELRTYCTKRDVIKMLVGN 121
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLP--W 268
K D R L T +A+ + SA +V F ++ K+ P W
Sbjct: 122 KIDKDQREVDTLTGT------NFARRYQMLFTECSAKTCDHVQDAFDELVHKIIQTPGLW 175
Query: 269 TVKRN---LTIGE 278
+++ L IGE
Sbjct: 176 DTEKSNSGLKIGE 188
>gi|167383306|ref|XP_001736482.1| rab6 [Entamoeba dispar SAW760]
gi|165901130|gb|EDR27285.1| rab6, putative [Entamoeba dispar SAW760]
Length = 186
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 21/192 (10%)
Query: 96 SDLVSLKISLLGDCQIGKTSFVKYVGNEQERSLQMA-----GLNLINKTLMVQGARIAFS 150
D+ K+ +GDC +GKT + G + M+ G + + + + V +I
Sbjct: 2 EDICRHKVVFIGDCSVGKTCII---GRFTSKIFDMSYDATIGTDFVTQIMDVDNKKIELQ 58
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGT 210
IWD G R +P + A ++ ++D++ + T N+I W+ E N T + I +G
Sbjct: 59 IWDTAGQERYRSLIPNYIRGASVVVIVYDISDKQTFNNIDHWFDEVPDRNSTLVYI-VGN 117
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMK--ATLFFSSATHNINVNKIFKFIMAKLFNL-P 267
K D + T+ K+ K A +SA +I + +F+ I + L L P
Sbjct: 118 KVDSERGV---------TKEEGMQKSYKWSARFIETSALKDIGITDLFEDIASNLAPLSP 168
Query: 268 WTVKRNLTIGEP 279
+ L I EP
Sbjct: 169 KCTEAPLRINEP 180
>gi|338711687|ref|XP_003362562.1| PREDICTED: ras-related protein Rab-37-like [Equus caballus]
Length = 223
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 9/145 (6%)
Query: 73 APDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERS---LQ 129
A T + E S S YD ++ K+ LLGD +GKT F+ + S +
Sbjct: 7 AAATRDGKAPERSPPCSPSYD-----LTGKVMLLGDSGVGKTCFLIQFKDGAFLSGTFIA 61
Query: 130 MAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSI 189
G++ NK + V G R+ IWD G R +DA A+L ++D+T++ + ++I
Sbjct: 62 TVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNI 121
Query: 190 VGWYSEARKWNQTAIPI-LIGTKFD 213
W +E ++ Q + I L+G K D
Sbjct: 122 RAWLTEIHEYAQRDVVIMLLGNKAD 146
>gi|365760935|gb|EHN02617.1| Sec4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 215
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 13/188 (6%)
Query: 79 AGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNEQERS-LQMAGLNLI 136
+GL +S + +G DS +KI L+GD +GK+ V++V ++ S + G++
Sbjct: 2 SGLRTVSASSGNGKSYDS---IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFK 58
Query: 137 NKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEA 196
KT+ + G ++ +WD G R + A+ I+ ++D+T T +I W+
Sbjct: 59 IKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTV 118
Query: 197 RKW-NQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKI 255
+ A +L+G K D D + Q A AK + SSA ++ NVN+I
Sbjct: 119 NEHATDEAQLLLVGNKSD------MDTRVVTVDQGEALAKELGIPFIESSAKNDDNVNEI 172
Query: 256 FKFIMAKL 263
F F +AKL
Sbjct: 173 F-FTLAKL 179
>gi|148222944|ref|NP_001080714.1| RAB5C, member RAS oncogene family [Xenopus laevis]
gi|33416792|gb|AAH56058.1| Rab5-prov protein [Xenopus laevis]
Length = 215
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 8/177 (4%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGARI 147
+G + + K+ LLG+ +GK+S V ++V G E G + +T+ + +
Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTV 70
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 206
F IWD G R P+ + A A + ++D+T+ T W E ++ I I
Sbjct: 71 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTETFARAKNWVKELQRQASPNIVIA 130
Query: 207 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
L G K D + D Q +A+AYA +SA +NVN+IF I KL
Sbjct: 131 LSGNKADLSSKRAVDFQ-----EAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|13774086|gb|AAK38149.1| small GTP-binding protein [Oryza sativa]
Length = 203
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
K+ LLGD GK+S V ++V + QE ++ G ++TL V + F IWD G
Sbjct: 13 KLVLLGDVGTGKSSLVLRFVKGQFVEFQESTI---GAAFFSQTLAVNDETVKFEIWDTAG 69
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFD-- 213
R P+ + A A + ++D+T+ + W E + + N I L G K D
Sbjct: 70 QERYHGLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGNKADMV 129
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKLF 264
+ ++P A +A+ YA+ + LFF +SA INVN +F I +L
Sbjct: 130 EARQVP-------AEEAKTYAQ--ENGLFFMETSAKTAINVNDVFHEIAKRLL 173
>gi|5902038|ref|NP_009013.1| rab-like protein 2A [Homo sapiens]
gi|7549817|ref|NP_038198.1| rab-like protein 2A [Homo sapiens]
gi|12643870|sp|Q9UBK7.1|RBL2A_HUMAN RecName: Full=Rab-like protein 2A
gi|5771388|gb|AAD51377.1|AF095350_1 RAB-like protein 2A [Homo sapiens]
gi|5771390|gb|AAD51378.1|AF095351_1 RAB-like protein 2A [Homo sapiens]
Length = 228
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 26/173 (15%)
Query: 92 YDTDSDLVSLKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAF 149
YD D ++ KI LGD +GK+ ++ + Q + L L L T V G I
Sbjct: 16 YDADDNV---KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILV 72
Query: 150 SIWDVGGDSR------SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTA 203
WD G R S+ H AC + +FD+ + T ++ WY+E R++
Sbjct: 73 DFWDTAGQERFQSMHASYYHKAHAC------IMVFDIQRKVTYRNLSTWYTELREFRPEI 126
Query: 204 IPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
I++ K DD + ++ +AK L+F SA NV K+F
Sbjct: 127 PCIVVANKIDDI---------NVTQKSFNFAKKFSLPLYFVSAADGTNVVKLF 170
>gi|432115938|gb|ELK37080.1| Ras-related protein Rab-37 [Myotis davidii]
Length = 223
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 82/185 (44%), Gaps = 20/185 (10%)
Query: 102 KISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ LLGD +GKT F+ + S + G++ NK + V G R+ IWD G
Sbjct: 31 KVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQE 90
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD---D 214
R +DA A+L ++D+T++ + +I W +E ++ Q + I L+G K D +
Sbjct: 91 RFRSVTHAYYRDAQALLLLYDITNKSSFENIRAWLTEIHEYAQKDVVIMLLGNKADVSSE 150
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNL 274
V D + T AR Y T SA +NV F I +L + L
Sbjct: 151 RVIRSEDGE----TLAREYGVPFMET----SAKTGMNVELAFLAIAKEL-----KYRAGL 197
Query: 275 TIGEP 279
GEP
Sbjct: 198 QAGEP 202
>gi|409107174|pdb|4DKX|A Chain A, Crystal Structure Of The Rab 6a'(Q72l)
gi|409107175|pdb|4DKX|B Chain B, Crystal Structure Of The Rab 6a'(Q72l)
Length = 216
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 8/189 (4%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGA 145
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 1 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAI 204
I +WD G R +P +D+ A + ++D+T+ + W + R + I
Sbjct: 61 TIRLQLWDTAGLERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
Query: 205 PILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
+L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 121 IMLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALP 175
Query: 265 NLPWTVKRN 273
+ T R+
Sbjct: 176 GMESTQDRS 184
>gi|322712113|gb|EFZ03686.1| Rab5-like protein ypt5 [Metarhizium anisopliae ARSEF 23]
Length = 220
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 5/170 (2%)
Query: 98 LVSLKISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMV-QGARIAFSIWDV 154
K+ LLG+ +GK+S V +Q S + + G + +T+ + + + F IWD
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEIWDT 76
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFD 213
G R P+ ++A + ++D+T +L+ W E R+ + I L G K
Sbjct: 77 AGQERYKSLAPMYYRNANCAVIVYDITQSSSLDKAKAWVKELQRQAKEDIIIALAGNKL- 135
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D V PD + A AYA+ F +SA NV ++F I KL
Sbjct: 136 DLVTEQPDKRAIPTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKL 185
>gi|113206062|ref|NP_001038105.1| ras-related protein Rab-6A [Gallus gallus]
gi|118573265|sp|Q1KME6.3|RAB6A_CHICK RecName: Full=Ras-related protein Rab-6A
gi|93209536|gb|ABF00126.1| GTP-binding protein [Gallus gallus]
Length = 208
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGA 145
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 1 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAI 204
I +WD G R +P +D+ A + ++D+T+ + W + R + I
Sbjct: 61 TIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
Query: 205 PILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
+L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 121 IMLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALP 175
Query: 265 NLPWT 269
+ T
Sbjct: 176 GMEST 180
>gi|3024528|sp|Q39434.1|RB2BV_BETVU RecName: Full=Ras-related protein Rab2BV
gi|974778|emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris]
Length = 214
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
KI L+GD +GK++ + ++ NE S G+ +TL V+G + IWD G R
Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQER 73
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRLP 219
+ AV L ++D+T R T +++ W E R + I I++ D L
Sbjct: 74 YRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLR 133
Query: 220 PDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKLFNL 266
++ A A K L F +SA +N+ K F+ I+ +++++
Sbjct: 134 A------VSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHI 176
>gi|357114010|ref|XP_003558794.1| PREDICTED: ras-related protein RABF1-like [Brachypodium distachyon]
Length = 199
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 70 SSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERS 127
SS P GL ++ ++ TDS+ + K+ LLGD +GK+ V ++V G S
Sbjct: 4 SSSVPARSTGGLNNINDNSTA---TDSNELRAKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
Query: 128 LQMAGLNLINKTLMVQGARIA-FSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTL 186
G + +++TL ++ + I F IWD G R P+ + A A + ++D+TS +
Sbjct: 61 KVTVGASFLSQTLALEDSTIVKFEIWDTAGQERYAALAPLYYRGAAAAIVVYDITSPESF 120
Query: 187 NSIVGWYSEARK-WNQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFF-- 243
W E +K N I +L+G K D + + +A+ YA+ K ++FF
Sbjct: 121 KKAQYWVKELQKHGNPGIIMVLVGNKADLH-----ESRSVPTQEAQEYAE--KNSMFFME 173
Query: 244 SSATHNINVNKIFKFIMAKL 263
+SA N+N++F+ I +L
Sbjct: 174 TSAKTADNINQLFEEIAKRL 193
>gi|115533542|ref|NP_001041294.1| Protein RAB-37, isoform b [Caenorhabditis elegans]
gi|351061891|emb|CCD69767.1| Protein RAB-37, isoform b [Caenorhabditis elegans]
Length = 223
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 82/177 (46%), Gaps = 11/177 (6%)
Query: 96 SDLVSLKISLLGDCQIGKTSF-VKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIW 152
++L + K+ LLGD GKT ++Y + G++ NK + + ++ IW
Sbjct: 25 AELTTFKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIW 84
Query: 153 DVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTK 211
D G R +DA A+L ++D+ +R + + W S+ +++ + A+ + L+G K
Sbjct: 85 DTAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNK 144
Query: 212 FDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPW 268
D +P D + + A+A + +SA NV++ F + ++ L +
Sbjct: 145 CDLPRAVPTD-------EGKRLAEAYQIPFMETSAKTGFNVDRAFLGLAERMLKLKY 194
>gi|255640576|gb|ACU20573.1| unknown [Glycine max]
Length = 213
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 96 SDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWD 153
S L K+ LGD +GKTS + +++ ++ + + Q G++ ++KT+ ++ + +WD
Sbjct: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKF 212
G R +P +D+ + ++D+ SR T + W E R + I +L+G K
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTAKWIEEVRTERGSDVIIVLVGNKT 124
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D L Q +I + A A+ + +SA N+ +F+ I A L
Sbjct: 125 D----LVEKRQVSIE-EGEAKARELNVMFIETSAKAGFNIKALFRKIAAAL 170
>gi|196008565|ref|XP_002114148.1| hypothetical protein TRIADDRAFT_58315 [Trichoplax adhaerens]
gi|190583167|gb|EDV23238.1| hypothetical protein TRIADDRAFT_58315 [Trichoplax adhaerens]
Length = 210
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 8/168 (4%)
Query: 102 KISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTL-MVQGA---RIAFSIWDVG 155
K+ LLG GKTS V+Y+ + E G KT+ ++ G ++ +IWD
Sbjct: 8 KVVLLGRTGSGKTSLIVRYISSVFSENVKPTIGAAFSKKTVQLIHGEERKQVVLAIWDTA 67
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKFDD 214
GD R P+ +++ A + FDL R + N + W E K Q + GTK D
Sbjct: 68 GDERYESMAPLYYRNSSAAIICFDLADRQSYNKVDFWVKELVEKVEQNCKLYICGTKTDL 127
Query: 215 FVRLPPDLQWTIA-TQARAYAKAMKATLFFSSATHNINVNKIFKFIMA 261
L+ + T+ AYAK + A +S+ N ++ +FK + A
Sbjct: 128 LAEYGGPLKRAVGPTEVMAYAKKLNAKFVETSSKSNYGIDDLFKLVAA 175
>gi|126327865|ref|XP_001363135.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Monodelphis
domestica]
Length = 208
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGA 145
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 1 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAI 204
I +WD G R +P +D+ A + ++D+T+ + W + R + I
Sbjct: 61 TIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
Query: 205 PILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
+L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 121 IMLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALP 175
Query: 265 NLPWT 269
+ T
Sbjct: 176 GMEST 180
>gi|115441051|ref|NP_001044805.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|15408893|dbj|BAB64284.1| putative Ras-related GTP-binding protein RAB11C [Oryza sativa
Japonica Group]
gi|113534336|dbj|BAF06719.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|125528382|gb|EAY76496.1| hypothetical protein OsI_04436 [Oryza sativa Indica Group]
gi|125572634|gb|EAZ14149.1| hypothetical protein OsJ_04079 [Oryza sativa Japonica Group]
gi|215700996|dbj|BAG92420.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 11/178 (6%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQ-ERSLQMAGLNLINKTLMVQGARIAFS 150
D + D + KI L+GD +GK++ + ++ NE S G+ +TL ++G I
Sbjct: 6 DNEYDYL-FKIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTIKAQ 64
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 209
IWD G R + AV L +FD+T R T +++ W E R I + ++G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVMMVG 124
Query: 210 TKFD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
K D + +R P+ A+++ + +SA INV K F +++++ +
Sbjct: 125 NKSDLNHLRSVPE------EDGHAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQI 176
>gi|397484432|ref|XP_003813381.1| PREDICTED: ras-related protein Rab-37 isoform 3 [Pan paniscus]
Length = 228
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 102 KISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ LLGD +GKT F+ + S + G++ NK + V G R+ IWD G
Sbjct: 36 KVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQE 95
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
R +DA A+L ++D+T++ + ++I W +E ++ Q + I L+G K D
Sbjct: 96 RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKAD 151
>gi|348553989|ref|XP_003462808.1| PREDICTED: ras-related protein Rab-43-like [Cavia porcellus]
Length = 210
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 101 LKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GKT V+ G ER G++ KTL +QG R+ IWD G
Sbjct: 17 FKLVLVGDASVGKTCVVQRFKTGTFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQE 76
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI-PILIGTKFD 213
R + A + +D+T R T S+ W + RK+ ++I +LIG K D
Sbjct: 77 RFRTITQSYYRSANGAILAYDITKRSTFLSVPHWIEDVRKYAGSSIVQLLIGNKSD 132
>gi|340716929|ref|XP_003396943.1| PREDICTED: ras-related protein Rab-21-like [Bombus terrestris]
gi|350426815|ref|XP_003494550.1| PREDICTED: ras-related protein Rab-21-like [Bombus impatiens]
Length = 225
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 8/160 (5%)
Query: 100 SLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
+ K+ LLG+ +GKTS ++YV N+ +R + + +NK L V G ++ +IWD G
Sbjct: 16 NFKVVLLGEGCVGKTSVALRYVENKFNDRHISTLQASFLNKKLTVHGKKVNLAIWDTAGQ 75
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDFV 216
+ PI + + + ++D+T T ++ W +E RK + I + I G K D
Sbjct: 76 EKFHALGPIYYRMSNGAIIVYDVTDYDTFQRVINWVTELRKMLGSGICLAIAGNKID--- 132
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L D + +A +A A F SA + N+ ++F
Sbjct: 133 -LEKD-RRVCTEEAEEFANKTGAMHFHISAKLSENIEEMF 170
>gi|91093509|ref|XP_969295.1| PREDICTED: similar to ras-related protein Rab-39B, putative
[Tribolium castaneum]
gi|270002676|gb|EEZ99123.1| hypothetical protein TcasGA2_TC005229 [Tribolium castaneum]
Length = 218
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 84/171 (49%), Gaps = 9/171 (5%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQ-GARIAFSIWDVGGD 157
++ L+GD +GK+S +KY G E S G++ + + V+ G RI +WD G
Sbjct: 10 FRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARLIEVKDGTRIKLQLWDTAGQ 69
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI--LIGTKFDDF 215
R +++V L ++D+ +R + I W SEAR+ + P+ L+G K D
Sbjct: 70 ERFRSITKSYYRNSVGALLVYDICNRASFEHIPVWMSEARRHIEPHRPVFALVGCKLD-- 127
Query: 216 VRLPPDLQWTIA-TQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
+ Q ++ +A+A+A +SA + +NV + F+ + +++N
Sbjct: 128 -LVNNGGQREVSKEEAKAFADQNGIFNVETSAKNGMNVEEAFRSVTQEVYN 177
>gi|354485034|ref|XP_003504689.1| PREDICTED: ras-related protein Rab-5C-like [Cricetulus griseus]
gi|344251933|gb|EGW08037.1| Ras-related protein Rab-5C [Cricetulus griseus]
Length = 216
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGARI 147
+G + + K+ LLG+ +GK+S V ++V G E G + +T+ + +
Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTV 70
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 206
F IWD G R P+ + A A + ++D+T+ T W E ++ I I
Sbjct: 71 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIA 130
Query: 207 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
L G K D + + Q +A+AYA +SA +NVN+IF I K L
Sbjct: 131 LAGNKADLASKRAVEFQ-----EAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---L 182
Query: 267 PWTVKRNLTIGEP 279
P +N+T G P
Sbjct: 183 PKNEPQNVT-GAP 194
>gi|311266848|ref|XP_003131275.1| PREDICTED: ras-related protein Rab-37-like isoform 1 [Sus scrofa]
Length = 223
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 9/145 (6%)
Query: 73 APDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERS---LQ 129
A T + E S S YD ++ K+ LLGD +GKT F+ + S +
Sbjct: 7 AAATRDGEAPERSPPCSPSYD-----LTGKVMLLGDSGVGKTCFLIQFKDGAFLSGTFIA 61
Query: 130 MAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSI 189
G++ NK + V G R+ IWD G R +DA A+L ++D+T++ + ++I
Sbjct: 62 TVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNI 121
Query: 190 VGWYSEARKWNQTAIPI-LIGTKFD 213
W +E ++ Q + I L+G K D
Sbjct: 122 RAWLTEIHEYAQRDVVIMLLGNKAD 146
>gi|300175460|emb|CBK20771.2| unnamed protein product [Blastocystis hominis]
Length = 196
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
+ K+ LLGD +GK+ V ++V +E QE ++ G + +T+ V I F IWD
Sbjct: 6 LHFKLVLLGDTAVGKSCLVVRFVRDEFFPFQEPTI---GAAFLTQTVNVDNVTIKFEIWD 62
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGTKF 212
G R P+ + A A + ++D+TSR + N W E R+ + + L G K
Sbjct: 63 TAGQERYRSLAPMYYRGAAAAIVVYDITSRESFNGAKTWVKELQRRGDPNVVIALAGNKC 122
Query: 213 D--DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D + ++P + +A YA +SA +NV +IF+ I KL
Sbjct: 123 DLEENRQIPRE-------EAEEYAVENGLLFMETSAKMALNVREIFESIGHKL 168
>gi|6679583|ref|NP_033023.1| ras-related protein Rab-11B [Mus musculus]
gi|1172815|sp|P46638.3|RB11B_MOUSE RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|433064|gb|AAC42093.1| Rab11b [Mus musculus]
gi|27502091|gb|AAO17377.1| RAB11B protein [Mus musculus]
gi|32493335|gb|AAH54753.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|55391484|gb|AAH85270.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|74138737|dbj|BAE27183.1| unnamed protein product [Mus musculus]
gi|74138750|dbj|BAE27188.1| unnamed protein product [Mus musculus]
gi|74144654|dbj|BAE27312.1| unnamed protein product [Mus musculus]
gi|74147424|dbj|BAE27582.1| unnamed protein product [Mus musculus]
gi|74151060|dbj|BAE27658.1| unnamed protein product [Mus musculus]
gi|74195098|dbj|BAE28293.1| unnamed protein product [Mus musculus]
gi|74195236|dbj|BAE28347.1| unnamed protein product [Mus musculus]
gi|112292981|dbj|BAF02868.1| Rab11B [Mus musculus]
gi|148678259|gb|EDL10206.1| mCG22989, isoform CRA_b [Mus musculus]
gi|187957168|gb|AAI57917.1| RAB11B, member RAS oncogene family [Mus musculus]
Length = 218
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R + I I L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|449440149|ref|XP_004137847.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
gi|449501036|ref|XP_004161260.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABC2a-like
[Cucumis sativus]
Length = 210
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 10/192 (5%)
Query: 89 SSGYDTDSDLVSLKISLLGDCQIGKTS-FVKYVGNEQERSLQMAGLNLINKTLMVQGARI 147
SSG ++ DL S K+ L+GD +GK+S + ++ + G++ K L V G R+
Sbjct: 4 SSGQSSNYDL-SFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGKRL 62
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVG-WYSEARKW--NQTAI 204
+IWD G R + A I+ ++D+T R T ++ W E + N+ +
Sbjct: 63 KLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKDCV 122
Query: 205 PILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
+LIG K D + I A AK + + SA NV K F+ + K+
Sbjct: 123 KMLIGNKVDRESERAVSREEGI-----ALAKVLGSYFLECSAKTRENVEKCFEDLALKIM 177
Query: 265 NLPWTVKRNLTI 276
P ++ T+
Sbjct: 178 EAPSLIEEGSTV 189
>gi|302692114|ref|XP_003035736.1| hypothetical protein SCHCODRAFT_81164 [Schizophyllum commune H4-8]
gi|300109432|gb|EFJ00834.1| hypothetical protein SCHCODRAFT_81164 [Schizophyllum commune H4-8]
Length = 210
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDSR 159
KI LLGD +GKTS + +++ + + + Q G++ ++KT+ ++ + +WD G R
Sbjct: 18 KIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 77
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFDDFVRL 218
+P +D+ + +FD+T+R + S W + R + I +L+G K D L
Sbjct: 78 FRSLIPSYIRDSSVAIVVFDITNRQSFLSTSKWIDDVRSERGNDVIIVLVGNKAD----L 133
Query: 219 PPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
Q T+ A AKA + + F +SA NV +FK I L
Sbjct: 134 SDKRQVTL---EEATAKAQQLNIMFMETSAKAGHNVKSLFKKIAMSL 177
>gi|353236471|emb|CCA68465.1| probable YPT6-GTP-binding protein of the rab family [Piriformospora
indica DSM 11827]
Length = 219
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 12/175 (6%)
Query: 94 TDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSI 151
T S L KI LLGD +GKTS + +++ + + + Q G++ ++KT+ ++ + +
Sbjct: 13 TSSPLKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQL 72
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGT 210
WD G R +P +D+ + ++D+T+R + S W + R + I +L+G
Sbjct: 73 WDTAGQERFRSLIPSYIRDSSVAIVVYDITNRASFLSTSKWIDDVRSERGNDVIIVLVGN 132
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
K D L Q T A KA + L F +SA NV +FK I L
Sbjct: 133 KAD----LSDKRQ---VTHEEASTKATQLNLMFMETSAKAGHNVKSLFKKIAMAL 180
>gi|49456921|emb|CAG46781.1| RAB6A [Homo sapiens]
Length = 208
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 8/189 (4%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGA 145
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 1 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAI 204
I +WD G R +P +D+ A + ++D+T+ + W + R + I
Sbjct: 61 TIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
Query: 205 PILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
+L+G K D L Q +I R AK + +SA +V ++F+ + A L
Sbjct: 121 IMLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYDVKQLFRRVAAALP 175
Query: 265 NLPWTVKRN 273
+ T R+
Sbjct: 176 GMESTQDRS 184
>gi|255575776|ref|XP_002528787.1| protein with unknown function [Ricinus communis]
gi|223531790|gb|EEF33609.1| protein with unknown function [Ricinus communis]
Length = 208
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 96 SDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWD 153
S L K+ LGD +GKTS + +++ ++ + + Q G++ ++KT+ ++ + +WD
Sbjct: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKF 212
G R +P +D+ + +FD+ SR T + W E R + I +L+G K
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKT 124
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D L Q +I + A A+ + +SA N+ +F+ I A L
Sbjct: 125 D----LVEKRQVSIE-EGEAKARDLNVMFIETSAKAGFNIKALFRKIAAAL 170
>gi|426346635|ref|XP_004040977.1| PREDICTED: ras-related protein Rab-37 isoform 1 [Gorilla gorilla
gorilla]
Length = 223
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 9/145 (6%)
Query: 73 APDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERS---LQ 129
A T + E S S YD ++ K+ LLGD +GKT F+ + S +
Sbjct: 7 AAATRDGEAPERSPPCSPSYD-----LTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIA 61
Query: 130 MAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSI 189
G++ NK + V G R+ IWD G R +DA A+L ++D+T++ + ++I
Sbjct: 62 TVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNI 121
Query: 190 VGWYSEARKWNQTAIPI-LIGTKFD 213
W +E ++ Q + I L+G K D
Sbjct: 122 RAWLTEIHEYAQRDVVIMLLGNKAD 146
>gi|41393127|ref|NP_958893.1| RAB5A, member RAS oncogene family, a [Danio rerio]
gi|28838709|gb|AAH47803.1| RAB5A, member RAS oncogene family [Danio rerio]
gi|39645921|gb|AAH63966.1| Rab5a protein [Danio rerio]
Length = 216
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G + + + K+ LLG+ +GK+S V ++V G E G + +TL +
Sbjct: 8 TRPNGSNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDD 67
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 68 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 127
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q A++YA +SA ++NVN+IF I KL
Sbjct: 128 VIALSGNKADLANKRAVDFQ-----DAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 182
>gi|410950267|ref|XP_003981831.1| PREDICTED: ras-related protein Rab-11B [Felis catus]
Length = 218
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R + I I L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|356497062|ref|XP_003517383.1| PREDICTED: ras-related protein RABH1b-like [Glycine max]
Length = 207
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 96 SDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWD 153
S L K+ LGD +GKTS + +++ ++ + + Q G++ ++KT+ ++ + +WD
Sbjct: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKF 212
G R +P +D+ + ++D+ SR T + W E R + I +L+G K
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTAKWIEEVRTERGSDVIIVLVGNKT 124
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D L Q +I + A A+ + +SA N+ +F+ I A L
Sbjct: 125 D----LVEKRQVSIE-EGEAKARELNVMFIETSAKAGFNIKALFRKIAAAL 170
>gi|351701311|gb|EHB04230.1| Ras-related protein Rab-11B [Heterocephalus glaber]
Length = 218
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R + I I L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|291414762|ref|XP_002723623.1| PREDICTED: RAB37, member RAS oncogene family isoform 1 [Oryctolagus
cuniculus]
Length = 216
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 102 KISLLGDCQIGKTSFVKYVGNEQERSL-----QMAGLNLINKTLMVQGARIAFSIWDVGG 156
K L+GD +GKTS + V +Q + + G+ NK + V GAR+ IWD G
Sbjct: 24 KTILVGDSGVGKTSLL--VQFDQGKFIPGSFSATVGIGFTNKVVTVDGARVKLQIWDTAG 81
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
R +DA A+L ++D+T++ + ++I W +E ++ Q + I L+G K D
Sbjct: 82 QERFRSVTHAYYRDAQALLLLYDITNKASFDNIRAWLTEVHEYAQRDVVIMLLGNKAD 139
>gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens]
gi|254071179|gb|ACT64349.1| RAB11B, member RAS oncogene family protein [synthetic construct]
gi|254071181|gb|ACT64350.1| RAB11B, member RAS oncogene family protein [synthetic construct]
Length = 218
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R + I I L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|410922303|ref|XP_003974622.1| PREDICTED: ras-related protein Rab-35-like [Takifugu rubripes]
Length = 201
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ ++GD +GK+S + ++ N S + G++ +T+ + G ++ IWD G
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R + ++ ++D+TS + ++ W E + IL+G K DD
Sbjct: 69 RFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDD---- 124
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 259
P+ + T A+ +A+ M LF +SA N+NV ++F I
Sbjct: 125 -PNSKVVETTDAQKFAEQMGINLFETSAKENLNVEEMFNCI 164
>gi|332860184|ref|XP_003317379.1| PREDICTED: RAB, member of RAS oncogene family-like 2B [Pan
troglodytes]
Length = 228
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 26/173 (15%)
Query: 92 YDTDSDLVSLKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAF 149
YD D ++ KI LGD +GK+ ++ + Q + L L L T V G I
Sbjct: 16 YDADDNV---KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILV 72
Query: 150 SIWDVGGDSR------SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTA 203
WD G R S+ H AC + +FD+ + T ++ WY+E R++
Sbjct: 73 DFWDTAGQERFQSMHASYYHKAHAC------IMVFDVQRKVTYRNLSTWYTELREFRPEI 126
Query: 204 IPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
I++ K DD + ++ +AK L+F SA NV K+F
Sbjct: 127 PCIVVANKIDDI---------NVTQKSFNFAKKFSLPLYFVSAADGTNVVKLF 170
>gi|332260869|ref|XP_003279503.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Nomascus
leucogenys]
Length = 249
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 18/219 (8%)
Query: 70 SSPAPD---TMEAGLVELSRTFSS---GYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-G 121
+SP P T AG R ++ G + + K+ LLG+ +GK+S V ++V G
Sbjct: 18 TSPHPHAFWTTTAGRAMAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKG 77
Query: 122 NEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLT 181
E G + +T+ + + F IWD G R P+ + A A + ++D+T
Sbjct: 78 QFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIT 137
Query: 182 SRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKAT 240
+ T W E ++ I I L G K D + + Q +A+AYA
Sbjct: 138 NTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQ-----EAQAYADDNSLL 192
Query: 241 LFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEP 279
+SA +NVN+IF I K LP +N T G P
Sbjct: 193 FMETSAKTAMNVNEIFMAIAKK---LPKNEPQNAT-GAP 227
>gi|91090906|ref|XP_973803.1| PREDICTED: similar to RAB37, member RAS oncogene family [Tribolium
castaneum]
Length = 253
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 6/156 (3%)
Query: 64 RRSSSESSPAPDTME--AGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKY- 119
R S +S+P+P E+ + + D + + K LLGD +GKTS VK+
Sbjct: 19 RVSGQKSTPSPTGYRDYKPPAEVLKLCQTDVLEDCEQIVHKTILLGDSGVGKTSLLVKFD 78
Query: 120 VGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMF 178
G Q + G+ NK + V ++ IWD G R +DA A+L ++
Sbjct: 79 TGRFQSGNFSATVGIGFTNKVVTVDQTKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLY 138
Query: 179 DLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
D+T++ + ++I W SE R++ Q + I L+G K D
Sbjct: 139 DVTNKTSFDNIRAWLSEIREYAQDDVVIMLLGNKAD 174
>gi|355703084|gb|EHH29575.1| GTP-binding protein YPT3 [Macaca mulatta]
Length = 218
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 13/179 (7%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFS 150
D + D + K+ L+GD +GK++ + ++ NE S G+ +++ V G I
Sbjct: 5 DDEYDYI-FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 209
IWD G R + AV L ++D+ T ++ W E R + I I L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 123
Query: 210 TKFD--DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
K D +P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 124 NKSDLRHLRAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|328709774|ref|XP_003244066.1| PREDICTED: ras-related protein Rab-26-like isoform 2 [Acyrthosiphon
pisum]
Length = 270
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 102 KISLLGDCQIGKTSF-VKY-VGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDS 158
K LLGD +GKTS VK+ G Q + G+ NK + V +++ IWD G
Sbjct: 76 KTILLGDSGVGKTSLLVKFDTGKFQTGNFSATVGIGFTNKIISVDDSKVKLQIWDTAGQE 135
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFD 213
R +DA A+L ++D+T++ + ++I W SE R + N + +LIG K D
Sbjct: 136 RFRSVTHAYYRDAHALLLLYDVTNKVSFDNIRAWLSEIRDYANDQVVIMLIGNKAD 191
>gi|432950660|ref|XP_004084550.1| PREDICTED: ras-related protein Rab-35-like [Oryzias latipes]
Length = 201
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ ++GD +GK+S + ++ N S + G++ +T+ + G ++ IWD G
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R + ++ ++D+TS + ++ W E + IL+G K DD
Sbjct: 69 RFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDD---- 124
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 259
P + T A+ +A+ M +LF +SA N+NV ++F I
Sbjct: 125 -PGSKVVETTDAQKFAEQMGISLFETSAKENVNVEEMFNCI 164
>gi|115450775|ref|NP_001048988.1| Os03g0151900 [Oryza sativa Japonica Group]
gi|11992279|gb|AAG42497.1|AF323991_1 small GTP-binding protein RAB5B [Oryza sativa Indica Group]
gi|108706223|gb|ABF94018.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113547459|dbj|BAF10902.1| Os03g0151900 [Oryza sativa Japonica Group]
gi|215740565|dbj|BAG97221.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768306|dbj|BAH00535.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192105|gb|EEC74532.1| hypothetical protein OsI_10050 [Oryza sativa Indica Group]
gi|222624202|gb|EEE58334.1| hypothetical protein OsJ_09439 [Oryza sativa Japonica Group]
Length = 199
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 70 SSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERS 127
SS P GL +S S+ TDS + K+ LLGD +GK+ V ++V G S
Sbjct: 4 SSSVPARSTGGLNNISNDNSA---TDSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
Query: 128 LQMAGLNLINKTLMVQGARIA-FSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTL 186
G + +++TL ++ + I F IWD G R P+ + A A + ++D+TS +
Sbjct: 61 KVTVGASFLSQTLALEDSTIVKFEIWDTAGQERYAALAPLYYRGAAAAVVVYDITSPESF 120
Query: 187 NSIVGWYSEARKWNQTA-IPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSS 245
+ W E +K I +L+G K D + + + +A+ YA+ +S
Sbjct: 121 SKAQYWVKELQKHGSPDIIMVLVGNKADLH-----ENRHVSSQEAQEYAEKNNMVFIETS 175
Query: 246 ATHNINVNKIFKFIMAKL 263
A N+N++F+ I +L
Sbjct: 176 AKTADNINQVFEEIAKRL 193
>gi|359322436|ref|XP_003639844.1| PREDICTED: ras-related protein Rab-6A [Canis lupus familiaris]
Length = 208
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 8/189 (4%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGA 145
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 1 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAI 204
I +WD G R +P +D+ + ++D+T+ + W + R + I
Sbjct: 61 TIRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
Query: 205 PILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
+L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 121 IMLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALP 175
Query: 265 NLPWTVKRN 273
+ T R+
Sbjct: 176 GMESTQDRS 184
>gi|410730349|ref|XP_003671354.2| hypothetical protein NDAI_0G03340 [Naumovozyma dairenensis CBS 421]
gi|401780172|emb|CCD26111.2| hypothetical protein NDAI_0G03340 [Naumovozyma dairenensis CBS 421]
Length = 207
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 91 GYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNEQERS-LQMAGLNLINKTLMVQGARIA 148
GYD+ +KI L+GD +GK+ V++V ++ S + G++ KT+ + G ++
Sbjct: 9 GYDS-----IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVK 63
Query: 149 FSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPIL 207
+WD G R + A+ I+ ++D+T T ++I W+ + N A +L
Sbjct: 64 LQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFSNIKQWFKTVNEHANDEAQLLL 123
Query: 208 IGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
+G K D D + Q + AK + SSA ++ NVN+IF F +AKL
Sbjct: 124 VGNKSD------MDTRVVTYEQGESLAKELGLPFVESSAKNDDNVNEIF-FTLAKL 172
>gi|426346639|ref|XP_004040979.1| PREDICTED: ras-related protein Rab-37 isoform 3 [Gorilla gorilla
gorilla]
gi|221041138|dbj|BAH12246.1| unnamed protein product [Homo sapiens]
Length = 196
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 102 KISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ LLGD +GKT F+ + S + G++ NK + V G R+ IWD G
Sbjct: 4 KVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQE 63
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
R +DA A+L ++D+T++ + ++I W +E ++ Q + I L+G K D
Sbjct: 64 RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKAD 119
>gi|763130|emb|CAA56176.1| YPT3 [Homo sapiens]
Length = 218
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R + I I L+G K D
Sbjct: 72 RYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|380016771|ref|XP_003692346.1| PREDICTED: ras-related protein Rab-21-like [Apis florea]
Length = 222
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 8/172 (4%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGA 145
+S + +++ + K+ LLG+ +GKTS ++YV N+ +R + + +NK L +
Sbjct: 1 MASSISSTNNVYNFKVVLLGEGCVGKTSVALRYVENKFNDRHISTLQASFLNKKLTIHEK 60
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP 205
++ +IWD G + PI + + + ++D+T T ++ W +E RK + I
Sbjct: 61 KVNLAIWDTAGQEKFHALGPIYYRMSNGAIIVYDVTDYDTFLRVINWVTELRKMLGSGIC 120
Query: 206 ILI-GTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ I G K D L D + I +A +A A F SA N N+ ++F
Sbjct: 121 LAIAGNKID----LEKDRRVYIE-EAEEFANKAGAMHFHISAKLNENIEEMF 167
>gi|74831371|emb|CAI39291.1| rab_C69 [Paramecium tetraurelia]
Length = 221
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 15/182 (8%)
Query: 94 TDSDLVSLKISLLGDCQIGKTS------FVKYVGNEQERSLQMAGLNLINKTLMVQGARI 147
T + KI LGD +GKTS F + GNEQ G++ I+KTL V +
Sbjct: 6 TSGPMQKYKIVFLGDQAVGKTSIINRFIFDNFTGNEQP----TVGIDFISKTLQVDNKSV 61
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPIL 207
+WD G R +P +D+ A + FD+T+ + ++ W + ++ + I
Sbjct: 62 RLQLWDTAGQERFRSLIPSYIRDSQAAIICFDITNEKSFQNLPRWIEDVKEERGDEVLIY 121
Query: 208 I-GTKFD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
I G K D + R P Q +A+ +++ + A SA INV + FK + L
Sbjct: 122 ILGNKIDLENERQIPTKQ--AEDKAKVFSE-LGAQFQEVSAKSAINVAEFFKKLSYDLLG 178
Query: 266 LP 267
P
Sbjct: 179 NP 180
>gi|393245652|gb|EJD53162.1| GTP binding protein [Auricularia delicata TFB-10046 SS5]
Length = 214
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 12/173 (6%)
Query: 96 SDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWD 153
S L KI LLGD +GKTS + +++ + + + Q G++ ++KT+ ++ + +WD
Sbjct: 15 SPLKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 74
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKF 212
G R +P +D+ + +FD+T+R + S W + R + I +L+G K
Sbjct: 75 TAGQERFRSLIPSYIRDSSVAIVVFDITNRASFLSTTKWIDDVRSERGSDVIIVLVGNKA 134
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D L Q T A KA + + F +SA NV +FK I L
Sbjct: 135 D----LSDKRQ---VTHEEATNKATEMNIMFMETSAKAGHNVKSLFKKIAMSL 180
>gi|182889996|gb|AAI65915.1| Rab5a protein [Danio rerio]
Length = 216
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G + + + K+ LLG+ +GK+S V ++V G E G + +TL +
Sbjct: 8 TRPNGSNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDD 67
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 68 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 127
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q A++YA +SA ++NVN+IF I KL
Sbjct: 128 VIALSGNKADLANKRAVDFQ-----DAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 182
>gi|15224916|ref|NP_181989.1| Ras-related protein RABH1B [Arabidopsis thaliana]
gi|297828175|ref|XP_002881970.1| hypothetical protein ARALYDRAFT_903887 [Arabidopsis lyrata subsp.
lyrata]
gi|75318653|sp|O80501.1|RAH1B_ARATH RecName: Full=Ras-related protein RABH1b; Short=AtRABH1b; AltName:
Full=Ras-related protein Rab6A; Short=AtRab6A
gi|3341681|gb|AAC27463.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|21593488|gb|AAM65455.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|107738267|gb|ABF83670.1| At2g44610 [Arabidopsis thaliana]
gi|110742258|dbj|BAE99055.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|297327809|gb|EFH58229.1| hypothetical protein ARALYDRAFT_903887 [Arabidopsis lyrata subsp.
lyrata]
gi|330255353|gb|AEC10447.1| Ras-related protein RABH1B [Arabidopsis thaliana]
gi|741994|prf||2008312A GTP-binding protein
Length = 208
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 96 SDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWD 153
S L K+ LGD +GKTS + +++ ++ + + Q G++ ++KT+ ++ + +WD
Sbjct: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKF 212
G R +P +D+ + ++D+ SR + + W E R + I +L+G K
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLVGNKT 124
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D L Q +I +A A A+ + +SA N+ +F+ I A L
Sbjct: 125 D----LVDKRQVSIE-EAEAKARELNVMFIETSAKAGFNIKALFRKIAAAL 170
>gi|401825835|ref|XP_003887012.1| Rab GTPase [Encephalitozoon hellem ATCC 50504]
gi|392998169|gb|AFM98031.1| Rab GTPase [Encephalitozoon hellem ATCC 50504]
Length = 202
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 11/171 (6%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+G+ +GKT +K +E Q + G++ K+L +G ++ IWD G
Sbjct: 9 FKIILIGNSGVGKTCLMKRYTDETYSFTQSSTIGVDFKIKSLEAEGEKVKLQIWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKFDD--- 214
R + + A I+ +FD+ S+ + +++ W E RK N+ I++G K DD
Sbjct: 69 RFRAIISNYYRGAHGIIIVFDMGSKESFDNLGDWLGEVRKNTNENVEMIILGNKVDDKEK 128
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
V +++ + K++ + +SA NI VN F+++ +L +
Sbjct: 129 IVVTEEEVEKFLNENG-----IEKSSFYMTSAKDNICVNDSFEYLTRRLID 174
>gi|328856833|gb|EGG05952.1| hypothetical protein MELLADRAFT_116620 [Melampsora larici-populina
98AG31]
Length = 216
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQG-ARIAFSIWDVGGD 157
K+ LLG+ +GK+S V ++V N+ QE G + +T+ + I + IWD G
Sbjct: 15 FKLVLLGESAVGKSSLVLRFVQNDFQEYRESTIGAAFLTQTVQLDDQTTIKYEIWDTAGQ 74
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFV 216
R P+ ++A + ++D+TS +L W E ++ + I I L G K D
Sbjct: 75 ERYKSLAPMYYRNANCAVVVYDITSSASLEKAKNWIRELQRQADSQIVIALAGNKAD--- 131
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
L Q + A AR +A+ F +SA NV++IF+ I KL
Sbjct: 132 -LEERRQVSTA-DARQFAEEENLLFFETSAKDATNVHEIFQAIAKKL 176
>gi|297850098|ref|XP_002892930.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
gi|297338772|gb|EFH69189.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 15/195 (7%)
Query: 90 SGYDTDSDLVSL-KISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGAR 146
+GY + D L K+ L+GD +GK++ + ++ NE S G+ +TL V G
Sbjct: 2 AGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKV 61
Query: 147 IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI 206
I IWD G R + AV L ++D+T R T ++ W E + I +
Sbjct: 62 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVV 121
Query: 207 -LIGTKFD--DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
L+G K D + +P + ++YA+ +SA NV F ++ ++
Sbjct: 122 MLVGNKSDLRHLLAVPTE-------DGKSYAEQESLCFMETSALEATNVEDAFAEVLTQI 174
Query: 264 FNLPWTVKRNLTIGE 278
+ + T K+ + GE
Sbjct: 175 YRI--TSKKQVEAGE 187
>gi|173259|gb|AAA35246.1| ras-like protein [Yarrowia lipolytica]
Length = 209
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 7/170 (4%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
KI LLG +GKT FV +YV N+ Q G + K ++V + IWD G R
Sbjct: 7 KIVLLGAQGVGKTCFVTRYVNNKFQAGQASTIGASFSRKRVVVNDTTVRLQIWDTAGQER 66
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVRL 218
PI + A + +D+TSR + +++ W E ++ + I I ++GTK D V+
Sbjct: 67 FRSMAPIYYRSATCGILCYDVTSRASFDAMHLWLLELKQNLSSDIIIHIVGTKV-DLVKD 125
Query: 219 PPDLQWTIATQARAYAKAM---KATLFFSSATHNINVNKIFKFIMAKLFN 265
P L+ Q YA + SA + V ++F+ I+ KL +
Sbjct: 126 EPSLREVPFEQCVEYASEWLQDDSCCHEISAKDDEGVEEVFEVIITKLLD 175
>gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus]
Length = 218
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R + I I L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|156403879|ref|XP_001640135.1| predicted protein [Nematostella vectensis]
gi|156227268|gb|EDO48072.1| predicted protein [Nematostella vectensis]
Length = 165
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 101 LKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTL-MVQGARIAFSIWDVGGD 157
K+ ++GD +GKTSFV +YV GN + G++ K + Q A + +WD+ G
Sbjct: 6 FKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIGVDFALKVIPWAQDATVRLQLWDIAGQ 65
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWY----SEARKWNQTAIP-ILIGTKF 212
R + K A A + MFDLTS+ T NS + W S+ + N IP IL+G K
Sbjct: 66 ERFTSMTRVYYKGAAACVIMFDLTSQQTFNSTIKWKNDLDSKCKLPNGKPIPCILVGNKS 125
Query: 213 DDFVRLPP 220
D R P
Sbjct: 126 DLSARPVP 133
>gi|126308787|ref|XP_001378194.1| PREDICTED: ras-related protein Rab-37-like [Monodelphis domestica]
Length = 273
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 102 KISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ LLGD +GKT F+ + + S + G++ NK + V G ++ IWD G
Sbjct: 80 KVMLLGDSGVGKTCFLIHFKDGAFLSGTFIATVGIDFRNKVVTVDGTKVKLQIWDTAGQE 139
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
R +DA A+L ++D+T++ + ++I W +E ++ Q + I L+G K D
Sbjct: 140 RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQKDVVIMLLGNKAD 195
>gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R + I I L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSDIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|397484428|ref|XP_003813379.1| PREDICTED: ras-related protein Rab-37 isoform 1 [Pan paniscus]
Length = 223
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 9/145 (6%)
Query: 73 APDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERS---LQ 129
A T + E S S YD ++ K+ LLGD +GKT F+ + S +
Sbjct: 7 AAATRDGEAPERSPPCSPSYD-----LTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIA 61
Query: 130 MAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSI 189
G++ NK + V G R+ IWD G R +DA A+L ++D+T++ + ++I
Sbjct: 62 TVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNI 121
Query: 190 VGWYSEARKWNQTAIPI-LIGTKFD 213
W +E ++ Q + I L+G K D
Sbjct: 122 RAWLTEIHEYAQRDVVIMLLGNKAD 146
>gi|322795122|gb|EFZ17962.1| hypothetical protein SINV_05258 [Solenopsis invicta]
Length = 219
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRS 160
K+ +LG +GKTS + +Y+GN + S + G + N + + +I +WD G R
Sbjct: 7 KVVMLGSQGVGKTSLIGRYLGNFEHASPTI-GASFFNCKINLDDMKIKLQVWDTAGQERF 65
Query: 161 FDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKFDDFVRLP 219
P+ +++ A + +FDLT T +I W E ++ +T + LIG K D +
Sbjct: 66 RSMAPMYYRNSNAAMLVFDLTQYNTFAAIKSWVKELQQNVEETMVLALIGNKSDLVQQRQ 125
Query: 220 PDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D + + YA + AT S HN V +F I L
Sbjct: 126 VD-----GEEGQRYATTIGATYHEISVLHNEGVESVFLAIAMSL 164
>gi|300708060|ref|XP_002996218.1| hypothetical protein NCER_100724 [Nosema ceranae BRL01]
gi|239605499|gb|EEQ82547.1| hypothetical protein NCER_100724 [Nosema ceranae BRL01]
Length = 196
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 16/167 (9%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWDV 154
+ K+ +LG +GK+S V KY NE +E ++ G + I KT+ + A + F IWD
Sbjct: 11 TYKMVVLGYYSVGKSSLVLKYAKNEFNPNEESTI---GASFITKTMTTKDACVKFEIWDT 67
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTA--IPILIGTKF 212
G R +P+ + A L ++D+TSR + + W E K+ +T + +L+ K
Sbjct: 68 AGQERYNSLIPMYYRGAQIGLIVYDITSRESFDVAKRWVEEL-KFEKTKDFLKVLVANKI 126
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 259
D L D + T + R YA +SA NV+KIF+ +
Sbjct: 127 D----LNEDRKVTFE-EGRDYAIQQNLLFVEASAKDGTNVSKIFELV 168
>gi|193645765|ref|XP_001950094.1| PREDICTED: ras-related protein Rab-11A-like isoform 1
[Acyrthosiphon pisum]
Length = 217
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 10/170 (5%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKIIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFD-DFV 216
R + AV L ++D+ + T ++ W SE R +Q + +L+G K D +
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKQLTYQNVERWLSELRDHADQNIVIMLVGNKSDLRHL 131
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
R P A +A A+A+A + +SA + NV F+ I+ +++N+
Sbjct: 132 RAVP------ADEATAFAEANNLSFIETSALDSTNVETAFENILTEIYNI 175
>gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus]
Length = 217
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFD--DF 215
R + AV L ++D+ T ++ W E R +Q + +L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVK-RNL 274
+P D +ARA+A+ + +SA + NV F+ I+ +++ + + RN
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVESAFQQILTEIYRIVSQKQIRND 184
Query: 275 TIGEP 279
T +P
Sbjct: 185 TDNDP 189
>gi|82596931|ref|XP_726467.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481886|gb|EAA18032.1| Rab6 [Plasmodium yoelii yoelii]
Length = 282
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 8/176 (4%)
Query: 94 TDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSI 151
+DS L K+ LG+ +GKTS + +++ + + + Q G++ ++KTL + + +
Sbjct: 80 SDSGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQL 139
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGT 210
WD G R +P +D+ A + ++D+T+R + + W + + + I +L+G
Sbjct: 140 WDTAGQERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIVLVGN 199
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
K D DL+ + A+ +SA N+ +FK I AKL NL
Sbjct: 200 KTD-----LADLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIAAKLPNL 250
>gi|440793018|gb|ELR14219.1| GTPbinding protein [Acanthamoeba castellanii str. Neff]
Length = 195
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 9/186 (4%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L K+ LGD +GKTS + +++ + + + Q G++ ++KT+ ++ I +WD
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 66
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFDD 214
G R +P +D+ + ++D+T+R T W + R + I +L+G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAIVVYDITNRTTFLDTARWVEDIRAERGNDVILMLVGNKTD- 125
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL-PWTVKRN 273
D + A + + AK A +SA NV +F+ + A L + P K+N
Sbjct: 126 ----LADKRCVSAEEGESKAKEFGAMFIETSAKAGYNVKPLFRQVAAALPGIDPIIQKQN 181
Query: 274 LTIGEP 279
+P
Sbjct: 182 TRKWKP 187
>gi|301785982|ref|XP_002928408.1| PREDICTED: ras-related protein Rab-11B-like [Ailuropoda
melanoleuca]
Length = 274
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R + I I L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|291240075|ref|XP_002739946.1| PREDICTED: RAB, member of RAS oncogene family-like 2A-like
[Saccoglossus kowalevskii]
Length = 222
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 10/160 (6%)
Query: 100 SLKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S+KI LGD +GK+ V+ + Q + L L L V + WD G
Sbjct: 19 SVKIICLGDSAVGKSKLVERFLMDGYQPQQLSTYALTLFRYNTTVNSKEVVVDFWDTAGQ 78
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVR 217
R P A + +FD+T + T ++ W+ E R++ + I K
Sbjct: 79 ERFSSMHPSYYHQAHCCILVFDITRKITYKNLPNWFKELREYRPSIPCICAANKI----- 133
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 257
D+ + + +A +AK +F SA+ NV K+F+
Sbjct: 134 ---DVDYNVTKKAFNFAKKHNMPFYFVSASDGTNVVKLFR 170
>gi|444727864|gb|ELW68342.1| Ras-related protein Rab-37 [Tupaia chinensis]
Length = 293
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 102 KISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ LLGD +GKT F+ + S + G++ NK + V G R+ IWD G
Sbjct: 101 KVMLLGDSGVGKTCFLIQFKDGAFLSRTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQE 160
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
R +DA A+L ++D+T++ + ++I W +E ++ Q + I L+G K D
Sbjct: 161 RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKAD 216
>gi|395532394|ref|XP_003768255.1| PREDICTED: uncharacterized protein LOC100922389 [Sarcophilus
harrisii]
Length = 495
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 13/195 (6%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGARI 147
+G + + K+ LLG+ +GK+S V ++V G E G + +T+ + +
Sbjct: 290 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTV 349
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 206
F IWD G R P+ + A A + ++D+T+ T W E ++ I I
Sbjct: 350 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIA 409
Query: 207 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF-- 264
L G K D + D Q +A+AYA +SA +NVN+IF I KL
Sbjct: 410 LAGNKADLASKRAVDFQ-----EAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKN 464
Query: 265 ---NLPWTVKRNLTI 276
N P RN +
Sbjct: 465 EPQNAPGAPGRNRGV 479
>gi|224046076|ref|XP_002190163.1| PREDICTED: ras-related protein Rab-31 [Taeniopygia guttata]
Length = 195
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 90/182 (49%), Gaps = 11/182 (6%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGD 157
LK+ LLGD +GK+S V ++V + + ++ G + + KT+ F IWD G
Sbjct: 6 ELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQ 65
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWN--QTAIPILIGTKFDDF 215
R P+ + + A + ++D+T + + +++ W E ++ A+PI G K D
Sbjct: 66 ERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENNAMPIA-GNKCD-- 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL-PWTVKRNL 274
D++ A+ YA+++ A + +SA + +N+ ++F+ I ++ L P + N
Sbjct: 123 ---LSDIREVPMKDAKEYAESIGAIVVETSAKNAVNIEELFQGISQQIPPLDPHEISNNG 179
Query: 275 TI 276
I
Sbjct: 180 AI 181
>gi|19173100|ref|NP_597651.1| similarity to RAS-LIKE GTP-BINDING PROTEIN YPT1 [Encephalitozoon
cuniculi GB-M1]
gi|19168767|emb|CAD26286.1| similarity to RAS-LIKE GTP-BINDING PROTEIN YPT1 [Encephalitozoon
cuniculi GB-M1]
Length = 201
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 11/169 (6%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+G+ +GKT +K +E Q + G++ K+L V G ++ IWD G
Sbjct: 9 FKMILIGNSGVGKTCLMKRYTDETYSFTQSSTIGVDFKIKSLEVAGEKVKLQIWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDD--- 214
R + + A I+ +FD+ S+ + +++ W SE RK + I+I G K DD
Sbjct: 69 RFRAIISNYYRGAHGIIIVFDMGSKESFDNLGDWLSEVRKNTSENVEIIILGNKVDDKEK 128
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
V +++ + K++ + +SA NI VN+ F+ + +L
Sbjct: 129 IVVTDEEIEKFLGENG-----IEKSSFYMTSAKDNICVNESFEHLTKRL 172
>gi|335290820|ref|XP_003356293.1| PREDICTED: ras-related protein Rab-39A-like [Sus scrofa]
Length = 219
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 17/172 (9%)
Query: 100 SLKISLLGDCQIGKTSFVK-YVGN-----EQERSLQMA---GLNLINKTLMVQ-GARIAF 149
+I+LLGD +GKTS ++ YV + E E L+ A G+ ++TL ++ G R+
Sbjct: 9 QFRIALLGDTAVGKTSLLRRYVADAPWIPEPEPELESAPTVGVEFYSRTLQLRAGPRVKL 68
Query: 150 SIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE--ARKWNQTAIPIL 207
+WD G R ++ V +L +FD+T+R + I W+ E A + AI +L
Sbjct: 69 QLWDTAGQERFRCITRSFYRNVVGVLLVFDVTNRKSFEHIRDWHQEVMATQGPDKAIFLL 128
Query: 208 IGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 259
+G K D ++ A +A A ++ +SA +N NV+ F +
Sbjct: 129 VGHKSD-----LQSMRCVSAQEAEELAASLGMAFVETSAKNNCNVDLAFNTV 175
>gi|225708202|gb|ACO09947.1| Ras-related protein Rab-5C [Osmerus mordax]
Length = 220
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 84/198 (42%), Gaps = 9/198 (4%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGARI 147
+G + + K+ LLG+ +GK+S V ++V G E G + +T+ + +
Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTV 70
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 206
F IWD G R P+ + A A + ++D+T+ T W E ++ I I
Sbjct: 71 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIA 130
Query: 207 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL-FN 265
L G K D + D Q +A+AYA +SA +NVN+IF I KL N
Sbjct: 131 LAGNKADIANKRAIDQQ-----EAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKN 185
Query: 266 LPWTVKRNLTIGEPIIDF 283
P P +D
Sbjct: 186 EPQGGAGTGGRTRPGVDL 203
>gi|213513268|ref|NP_001133617.1| Ras-related protein Rab-5A [Salmo salar]
gi|197631797|gb|ACH70622.1| member RAS oncogene family [Salmo salar]
gi|209154698|gb|ACI33581.1| Ras-related protein Rab-5A [Salmo salar]
Length = 216
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G +T + + K+ LLG+ +GK+S V ++V G E G + +T+ +
Sbjct: 8 TRPNGPNTGNKISQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD 67
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T++ + W E ++ I
Sbjct: 68 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNKESFARAKNWVKELQRQASPNI 127
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q A++YA +SA ++NVN++F I KL
Sbjct: 128 VIALAGNKADLANKRALDFQ-----DAQSYADDNSLLFMETSAKTSMNVNEMFMAIAKKL 182
>gi|147903483|ref|NP_001080506.1| RAB6A, member RAS oncogene family [Xenopus laevis]
gi|28302338|gb|AAH46683.1| Rab6-prov protein [Xenopus laevis]
Length = 208
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 8/179 (4%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGA 145
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 1 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAI 204
I +WD G R +P +D+ A + ++D+T+ + W + R + I
Sbjct: 61 TIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
Query: 205 PILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
+L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 121 IMLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|14249144|ref|NP_116006.1| ras-related protein Rab-11B [Rattus norvegicus]
gi|78369332|ref|NP_001030468.1| ras-related protein Rab-11B [Bos taurus]
gi|190358517|ref|NP_004209.2| ras-related protein Rab-11B [Homo sapiens]
gi|226529709|ref|NP_001142168.1| uncharacterized protein LOC100274335 [Zea mays]
gi|349585085|ref|NP_001231804.1| RAB11B, member RAS oncogene family [Sus scrofa]
gi|387762845|ref|NP_001248413.1| ras-related protein Rab-11B [Macaca mulatta]
gi|297703412|ref|XP_002828633.1| PREDICTED: ras-related protein Rab-11B [Pongo abelii]
gi|332264185|ref|XP_003281127.1| PREDICTED: ras-related protein Rab-11B isoform 1 [Nomascus
leucogenys]
gi|332852540|ref|XP_001147785.2| PREDICTED: ras-related protein Rab-11B [Pan troglodytes]
gi|344299320|ref|XP_003421334.1| PREDICTED: ras-related protein Rab-11B-like [Loxodonta africana]
gi|345786671|ref|XP_854399.2| PREDICTED: ras-related protein Rab-11B [Canis lupus familiaris]
gi|354496877|ref|XP_003510550.1| PREDICTED: ras-related protein Rab-11B-like [Cricetulus griseus]
gi|397477329|ref|XP_003810025.1| PREDICTED: ras-related protein Rab-11B [Pan paniscus]
gi|402904037|ref|XP_003914857.1| PREDICTED: ras-related protein Rab-11B [Papio anubis]
gi|403296089|ref|XP_003938953.1| PREDICTED: ras-related protein Rab-11B [Saimiri boliviensis
boliviensis]
gi|426229069|ref|XP_004008616.1| PREDICTED: ras-related protein Rab-11B [Ovis aries]
gi|426387018|ref|XP_004059975.1| PREDICTED: ras-related protein Rab-11B [Gorilla gorilla gorilla]
gi|38258938|sp|Q15907.4|RB11B_HUMAN RecName: Full=Ras-related protein Rab-11B; AltName:
Full=GTP-binding protein YPT3; Flags: Precursor
gi|50403673|sp|O35509.4|RB11B_RAT RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|108860922|sp|Q3MHP2.3|RB11B_BOVIN RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|9837357|gb|AAG00542.1|AF286534_1 GTP-binding protein RAB11B [Rattus norvegicus]
gi|20379070|gb|AAM21095.1|AF498947_1 small GTP binding protein RAB11B [Homo sapiens]
gi|38303833|gb|AAH62041.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|54695942|gb|AAV38343.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|61355645|gb|AAX41161.1| RAB11B member RAS oncogene family [synthetic construct]
gi|75773827|gb|AAI05163.1| RAB11B, member RAS oncogene family [Bos taurus]
gi|82414868|gb|AAI10082.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|90085246|dbj|BAE91364.1| unnamed protein product [Macaca fascicularis]
gi|119589331|gb|EAW68925.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119589333|gb|EAW68927.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|149031659|gb|EDL86622.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|189066581|dbj|BAG35831.1| unnamed protein product [Homo sapiens]
gi|194707448|gb|ACF87808.1| unknown [Zea mays]
gi|296485751|tpg|DAA27866.1| TPA: ras-related protein Rab-11B [Bos taurus]
gi|307686193|dbj|BAJ21027.1| RAB11B, member RAS oncogene family [synthetic construct]
gi|344244036|gb|EGW00140.1| Ras-related protein Rab-11B [Cricetulus griseus]
gi|380817956|gb|AFE80852.1| ras-related protein Rab-11B [Macaca mulatta]
gi|383422851|gb|AFH34639.1| ras-related protein Rab-11B [Macaca mulatta]
gi|385281372|gb|AFI57838.1| ras-related protein Rab-11B [Capra hircus]
gi|410217180|gb|JAA05809.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410217182|gb|JAA05810.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410257678|gb|JAA16806.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410301334|gb|JAA29267.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410337015|gb|JAA37454.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|432104449|gb|ELK31073.1| Ras-related protein Rab-11B [Myotis davidii]
Length = 218
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R + I I L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|291416041|ref|XP_002724256.1| PREDICTED: RAB26, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 256
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 70 SSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNE--QER 126
+ P P G + R S G D V+ K+ L+GD +GKT V++
Sbjct: 34 ARPGPKAPPNGPPQPGRP-SVGGGGDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGS 92
Query: 127 SLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTL 186
+ G++ NK L V G ++ IWD G R +DA A+L ++D+T++ +
Sbjct: 93 FISTVGIDFRNKALDVDGTKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKASF 152
Query: 187 NSIVGWYSEARKWNQ-TAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSS 245
N+I W +E R+ Q + +L+ K D + AK +S
Sbjct: 153 NNIQAWLAEIREHAQHDVVLMLLANKVDSAHE-----RVVKREDGEKLAKEYGLPFMETS 207
Query: 246 ATHNINVNKIFKFIMAKL 263
A +NV+ F+ I +L
Sbjct: 208 AKTGLNVDLAFRAIAKEL 225
>gi|221048037|gb|ACL98126.1| RAB11B protein [Epinephelus coioides]
Length = 218
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R I I L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 132 RAVPTD-------EARAFAEGNTLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|354721184|ref|NP_001238968.1| ras-related protein Rab-5C isoform b [Homo sapiens]
gi|397485578|ref|XP_003813920.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Pan paniscus]
Length = 249
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 18/219 (8%)
Query: 70 SSPAPD---TMEAGLVELSRTFSS---GYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-G 121
+SP P T AG R ++ G + + K+ LLG+ +GK+S V ++V G
Sbjct: 18 TSPHPHALWTTTAGRAMAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKG 77
Query: 122 NEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLT 181
E G + +T+ + + F IWD G R P+ + A A + ++D+T
Sbjct: 78 QFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIT 137
Query: 182 SRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKAT 240
+ T W E ++ I I L G K D + + Q +A+AYA
Sbjct: 138 NTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQ-----EAQAYADDNSLL 192
Query: 241 LFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIGEP 279
+SA +NVN+IF I K LP +N T G P
Sbjct: 193 FMETSAKTAMNVNEIFMAIAKK---LPKNEPQNAT-GAP 227
>gi|54859685|ref|NP_001006639.1| ras-related protein Rab-37 isoform 2 [Homo sapiens]
gi|20139581|sp|Q96AX2.3|RAB37_HUMAN RecName: Full=Ras-related protein Rab-37; Flags: Precursor
gi|16741621|gb|AAH16615.1| RAB37 protein [Homo sapiens]
gi|21758002|dbj|BAC05227.1| unnamed protein product [Homo sapiens]
gi|119609585|gb|EAW89179.1| RAB37, member RAS oncogene family, isoform CRA_c [Homo sapiens]
gi|119609587|gb|EAW89181.1| RAB37, member RAS oncogene family, isoform CRA_c [Homo sapiens]
Length = 223
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Query: 83 ELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKT 139
E S S YD ++ K+ LLGD +GKT F+ + S + G++ NK
Sbjct: 17 ERSPPCSPSYD-----LTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKV 71
Query: 140 LMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW 199
+ V G R+ IWD G R +DA A+L ++D+T++ + ++I W +E ++
Sbjct: 72 VTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEY 131
Query: 200 NQTAIPI-LIGTKFD 213
Q + I L+G K D
Sbjct: 132 AQRDVVIMLLGNKAD 146
>gi|343473101|emb|CCD14917.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 231
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
+ KI LLGD +GKTS V +++ + ++ Q G++ +KTL V + +WD
Sbjct: 27 MAKYKIVLLGDQSVGKTSLVTRFMYDTFDQQYQATIGIDFFSKTLHVDNRAVWLHVWDTA 86
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDD 214
G R +P +++ A + ++D+TSR + S W E RK + + + L+G K D
Sbjct: 87 GQERFRSLIPSYIRNSAAAIIVYDITSRVSFLSTFDWVDEVRKVRGSDVVVALVGNKCDA 146
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
R ++T+ A KA + L F SA NV +F+ + +
Sbjct: 147 QERR------EVSTE-EAQKKADEYCLIFVEVSAKQGTNVKSLFRKVAEAM 190
>gi|281342864|gb|EFB18448.1| hypothetical protein PANDA_018338 [Ailuropoda melanoleuca]
Length = 204
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 12/170 (7%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G R
Sbjct: 1 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 60
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DFV 216
+ AV L ++D+ T ++ W E R + I I L+G K D
Sbjct: 61 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 120
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 121 AVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 163
>gi|356541335|ref|XP_003539133.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABH1b-like
[Glycine max]
Length = 236
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 96 SDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWD 153
S L K+ LGD +GKTS + +++ ++ + + Q G++ ++KT+ ++ + +WD
Sbjct: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKF 212
G R +P +D+ + ++D+ SR T + W E R + I +L+G K
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTAKWIEEVRTERGSDVIIVLVGNKT 124
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D L Q +I + A A+ + +SA N+ +F+ I A L
Sbjct: 125 D----LVEKRQVSIE-EGEAKARELNVMFIETSAKAGFNIKALFRKIAAAL 170
>gi|241151857|ref|XP_002406775.1| RAS-related protein, putative [Ixodes scapularis]
gi|215493921|gb|EEC03562.1| RAS-related protein, putative [Ixodes scapularis]
Length = 215
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
S K+ LLG+ +GKTS V +YV N+ ++ + + K L + G R+ +IWD G
Sbjct: 13 SFKVVLLGEGCVGKTSLVLRYVQNKFNDKHFSTLQASFLEKKLNIAGKRVHLAIWDTAGQ 72
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD-DF 215
+ PI +D+ + ++D+T + + W E RK + + ++G K D +
Sbjct: 73 EKFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVRELRKMLGGDVCLTIVGNKTDLEK 132
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
R P +A AYA ++ AT +SA + + ++F
Sbjct: 133 QRAVP------VAEAEAYAASVGATHLQTSAKLSRGIEELF 167
>gi|226491888|ref|NP_001147252.1| ras-related protein Rab11C [Zea mays]
gi|195609118|gb|ACG26389.1| ras-related protein Rab11C [Zea mays]
Length = 217
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 8/169 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +TL V+G + IWD G
Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQE 72
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVR 217
R + A+ L ++D+T T ++ W E R I I LIG K D
Sbjct: 73 RYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADYNIVIMLIGNKTD---- 128
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
L+ A++YA+ + +SA +NV K F+ I+++++ +
Sbjct: 129 -LKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRI 176
>gi|56967680|gb|AAW31989.1| CG2885 [Drosophila melanogaster]
Length = 195
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 12/170 (7%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQ--ERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ +LGD +GK+ + +++ E+ L+ G+++ +++ + + +WD GD
Sbjct: 8 FKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDK 67
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFDDFVR 217
R +P + A IL ++D+TS + +I GW E R+ I +L+G K DD
Sbjct: 68 RFNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVIVLLVGNKSDD--- 124
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFS--SATHNINVNKIFKFIMAKLFN 265
P+ + Q YA + L F SA +NV +IF + +++
Sbjct: 125 --PNHRQVSMEQGFNYAH--RGALGFEEVSAKSGMNVYEIFSSLAMDIYH 170
>gi|399217018|emb|CCF73705.1| unnamed protein product [Babesia microti strain RI]
Length = 243
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 102 KISLLGDCQIGKTS--------FVKYVGNEQERSLQMA-GLNLINKTLMVQ-GARIAFSI 151
KI L+GD +GK + +Y+ N + G+ +T+ +Q G + I
Sbjct: 11 KIILIGDATVGKDTTNVGKSYLLSRYIKNSLPPVAKATIGVEFATRTVPLQTGGTVKAQI 70
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQT-AIPILIGT 210
WD G R + AV + ++D+T+R + ++ W E R+ + I IL+G
Sbjct: 71 WDTAGQERYRSITSAHYRRAVGAVLVYDVTNRQSFTNVQKWLDELRQAAEPDVIVILVGN 130
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTV 270
K D + P Q + A+ +A+ F +SA NV +IF+ ++ ++FNL
Sbjct: 131 KVDLLDKSPLARQVPL-QMAQKFAEECNIQHFEASAVTGYNVKQIFEHLLQEIFNLQSRA 189
Query: 271 KRNLTIGEPIIDF 283
N+ + + +
Sbjct: 190 AVNMVVHSESVKY 202
>gi|405974092|gb|EKC38762.1| Ras-related protein Rab-31 [Crassostrea gigas]
Length = 224
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 7/173 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDS 158
+K+ LLG+ +GK+S V ++V + + +L+ G + + K L V F IWD G
Sbjct: 6 VKVCLLGESGVGKSSIVLRFVSDSFKGALESTIGASFMTKRLEVGDVSYQFQIWDTAGQE 65
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
+ P+ + A A + ++D+T T ++ W E ++ + I I D
Sbjct: 66 KYRSLAPMYYRGASAAIIVYDITREATYRTVKDWVRELKRNCTADMVIAIAGNKSDL--- 122
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVK 271
DL+ A A YA+++ A +SA +NV +F I KL N+ V+
Sbjct: 123 -NDLREVRARDAEEYAQSIGALFIETSALSAVNVPHLFTAI-GKLCNINSAVE 173
>gi|363753442|ref|XP_003646937.1| hypothetical protein Ecym_5362 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890573|gb|AET40120.1| hypothetical protein Ecym_5362 [Eremothecium cymbalariae
DBVPG#7215]
Length = 209
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 7/173 (4%)
Query: 95 DSDLVSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIW 152
+S++ S+K+ LLG+ +GK+S V ++V N+ E G + + + + I F IW
Sbjct: 2 NSNVASIKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNMGNQTIKFEIW 61
Query: 153 DVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTK 211
D G R P+ ++A A L ++D+T + W E + +I I L+G K
Sbjct: 62 DTAGQERFASLAPMYYRNAQAALVVYDITKPQSFIKARHWVKELHEQASKSIIIALVGNK 121
Query: 212 FDDFVRLPPDLQWTIA-TQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D L D + +A +A + A+ F +SA NVN++F I K+
Sbjct: 122 LD---LLESDEERKVAREEAESLAQEEGLLFFETSAKTGDNVNEVFLGIGEKI 171
>gi|432855565|ref|XP_004068250.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R + I I L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 132 RAVPTD-------EARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|47220716|emb|CAG11785.1| unnamed protein product [Tetraodon nigroviridis]
Length = 194
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 6/161 (3%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQ-MAGLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLG+ +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGETGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P+ + + A + ++D+T + ++ W E R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEDSFQTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ D + A+ YA ++ A +SA + IN+N++F
Sbjct: 123 L----DAREVSEKDAKDYADSIHAIFVETSAKNAININEVF 159
>gi|321453282|gb|EFX64533.1| hypothetical protein DAPPUDRAFT_304534 [Daphnia pulex]
Length = 219
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQERS--LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ ++G+ +GKTSF+ ++ S + G++ KT+ Q R+ IWD G
Sbjct: 22 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQE 81
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWN-QTAIPILIGTKFDDFVR 217
R + A+ L M+D+T+ + NS+ W ++ + ++ A IL+G K D
Sbjct: 82 RYRTITTAYYRGAMGFLLMYDITNEESFNSVQDWCTQIKTYSWDNAQVILVGNKCD---- 137
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 257
D + + + A + F +SA NINV +F+
Sbjct: 138 -MEDERVISYERGKQLADQLGLEFFETSAKENINVKAVFE 176
>gi|224129448|ref|XP_002328719.1| predicted protein [Populus trichocarpa]
gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa]
gi|222839017|gb|EEE77368.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 8/169 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +TL V+G + IWD G
Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQE 72
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVR 217
R + A+ L ++D+T T ++ W E R + I I LIG K D
Sbjct: 73 RYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTD---- 128
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
L+ A++YA+ +SA NV K F+ I+++++ +
Sbjct: 129 -LKHLRAVATEDAQSYAEKEGLAFIETSALEATNVEKAFQTILSEIYRI 176
>gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R I I L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|332030618|gb|EGI70306.1| Ras-related protein Rab-35 [Acromyrmex echinatior]
Length = 201
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 7/166 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ ++GD +GK+S + ++ N S + G++ +T+ V G R+ IWD G
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFNGSYITTIGVDFKIQTVEVDGERVKLQIWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R + ++ ++D+TS T ++ W E + +L+G K D
Sbjct: 69 RFRTITSTYYRGTHGVIVVYDVTSGDTFANVKRWLHEIEQNCDVVNRVLVGNKND----- 123
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
P+ + + A+ +A M LF +SA NINV ++F I ++
Sbjct: 124 APNQKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITRQVL 169
>gi|71019037|ref|XP_759749.1| hypothetical protein UM03602.1 [Ustilago maydis 521]
gi|46099272|gb|EAK84505.1| hypothetical protein UM03602.1 [Ustilago maydis 521]
Length = 233
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Query: 96 SDLVSLKISLLGDCQIGKTSFV-KYVGNE---QERSLQMAGLNLINKTLMVQGARIAFSI 151
+D+ +LKI L+G +GK+S + ++ +E E + G++ K + V G R SI
Sbjct: 5 NDVPTLKILLIGASSVGKSSLLLRFTDDEFLSPEETTATIGVDYRIKGIEVGGKRFKLSI 64
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQT--AIPILIG 209
WD G R + A ++ +D+T R T +++ W++E + + + +++G
Sbjct: 65 WDTAGQERFRTLTSSYYRGAQGVIITYDVTQRDTFDALPTWFNELETFTTSDDVVKVIVG 124
Query: 210 TKFD-DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLP 267
K D +F R+ + + +A+ M SA + VN F ++ ++ + P
Sbjct: 125 NKVDKEFSRV------VTTKEGQEFAEKMGCLFVECSAKKGVGVNGAFDELVNRIISTP 177
>gi|189502804|gb|ACE06783.1| unknown [Schistosoma japonicum]
Length = 248
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQERS--LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ ++G+ +GKTSF+ ++ S + G++ KT+ Q R+ IWD G
Sbjct: 57 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTIFRQDKRVKLQIWDTAGQE 116
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWN-QTAIPILIGTKFDDFVR 217
R + A+ + M+D+T+ + N++ W ++ + ++ A +L+G K D
Sbjct: 117 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWVTQIKTYSWDNAQVVLVGNKCD---- 172
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 257
D + + R A + F +SA NINV +F+
Sbjct: 173 -LVDDRVVSVDRGRHLAHQLGLEFFEASAKENINVKNVFE 211
>gi|449465314|ref|XP_004150373.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
gi|449513018|ref|XP_004164205.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
Length = 215
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 10/188 (5%)
Query: 100 SLKISLLGDCQIGKTS-FVKYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
S KI L+GD +GK+S + Y+ N G++ K + V G ++ +IWD G
Sbjct: 16 SFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGGKKLKLTIWDTAGQE 75
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVG-WYSEARKW--NQTAIPILIGTKFDDF 215
R + A I+ ++D+T R T +++ W E + N+ I IL+G K D
Sbjct: 76 RFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNKVDR- 134
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKR-NL 274
D T + AK K+ SA NV++ FK + +K+ +P ++ ++
Sbjct: 135 ---GSDRAVT-TEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSV 190
Query: 275 TIGEPIID 282
+ + I+D
Sbjct: 191 VVKQKILD 198
>gi|440910197|gb|ELR60022.1| Ras-related protein Rab-11B, partial [Bos grunniens mutus]
Length = 225
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 19 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 78
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R + I I L+G K D
Sbjct: 79 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 138
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 139 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 182
>gi|38679888|ref|NP_942599.1| ras-related protein Rab-6A isoform b [Homo sapiens]
gi|197102660|ref|NP_001125644.1| ras-related protein Rab-6A [Pongo abelii]
gi|397487240|ref|XP_003814713.1| PREDICTED: ras-related protein Rab-6A isoform 1 [Pan paniscus]
gi|131796|sp|P20340.3|RAB6A_HUMAN RecName: Full=Ras-related protein Rab-6A; Short=Rab-6
gi|75055038|sp|Q5RAV6.3|RAB6A_PONAB RecName: Full=Ras-related protein Rab-6A
gi|4585565|gb|AAD25535.1|AF130986_1 RAS-related protein RAB6 [Homo sapiens]
gi|20379054|gb|AAM21087.1|AF498939_1 small GTP binding protein RAB6A [Homo sapiens]
gi|550072|gb|AAA60246.1| GTP-binding protein [Homo sapiens]
gi|54696264|gb|AAV38504.1| RAB6A, member RAS oncogene family [Homo sapiens]
gi|55728729|emb|CAH91104.1| hypothetical protein [Pongo abelii]
gi|61356023|gb|AAX41200.1| RAB6A member RAS oncogene family [synthetic construct]
gi|66911837|gb|AAH96818.1| RAB6A, member RAS oncogene family [Homo sapiens]
gi|119595313|gb|EAW74907.1| RAB6A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595314|gb|EAW74908.1| RAB6A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595316|gb|EAW74910.1| RAB6A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595318|gb|EAW74912.1| RAB6A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|158260519|dbj|BAF82437.1| unnamed protein product [Homo sapiens]
gi|158261287|dbj|BAF82821.1| unnamed protein product [Homo sapiens]
gi|190692045|gb|ACE87797.1| RAB6A, member RAS oncogene family protein [synthetic construct]
gi|254071271|gb|ACT64395.1| RAB6A, member RAS oncogene family protein [synthetic construct]
gi|261860502|dbj|BAI46773.1| RAB6A, member RAS oncogene family [synthetic construct]
Length = 208
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 88/189 (46%), Gaps = 8/189 (4%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGA 145
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 1 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAI 204
+ +WD G R +P +D+ + ++D+T+ + W + R + I
Sbjct: 61 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
Query: 205 PILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
+L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 121 IMLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALP 175
Query: 265 NLPWTVKRN 273
+ T R+
Sbjct: 176 GMESTQDRS 184
>gi|397484434|ref|XP_003813382.1| PREDICTED: ras-related protein Rab-37 isoform 4 [Pan paniscus]
Length = 196
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 102 KISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ LLGD +GKT F+ + S + G++ NK + V G R+ IWD G
Sbjct: 4 KVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQE 63
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
R +DA A+L ++D+T++ + ++I W +E ++ Q + I L+G K D
Sbjct: 64 RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKAD 119
>gi|357125866|ref|XP_003564610.1| PREDICTED: ras-related protein Rab11C-like [Brachypodium
distachyon]
Length = 216
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 10/170 (5%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GD +GK++ + ++ NE S G+ +TL + G + IWD G
Sbjct: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKTVKAQIWDTAGQE 72
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD-DFV 216
R + AV L +FD+T R T +++ W E R I + ++G K D + +
Sbjct: 73 RYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVMMVGNKSDLNHL 132
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
R P+ ++A+++ + +SA INV K F +++++ +
Sbjct: 133 RSVPE------EDSQAFSEKESLSFLETSALEAINVEKAFHTVLSEIHQI 176
>gi|15222396|ref|NP_172221.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
gi|297843530|ref|XP_002889646.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332320580|sp|Q9LNW1.2|RAA2B_ARATH RecName: Full=Ras-related protein RABA2b; Short=AtRABA2b
gi|297335488|gb|EFH65905.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332190000|gb|AEE28121.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
Length = 214
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 10/169 (5%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
KI L+GD +GK++ + ++ NE S G+ +TL V+G + IWD G R
Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQER 73
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFD-DFVR 217
+ AV L ++D+T R T +++ W E R + I I++ G K D + +R
Sbjct: 74 YRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAGNKSDLNHLR 133
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
D R+ A+ + +SA N+ K F+ I+++++++
Sbjct: 134 SVAD------EDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHI 176
>gi|224071962|ref|XP_002199537.1| PREDICTED: ras-related protein Rab-35 [Taeniopygia guttata]
Length = 201
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ ++GD +GK+S + ++ N S + G++ +T+ + G ++ IWD G
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R + ++ ++D+TS + ++ W E + IL+G K DD
Sbjct: 69 RFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDD---- 124
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 259
PD + A +A M+ LF +SA NINV ++F I
Sbjct: 125 -PDRKVVETEDAYKFAGQMEIQLFETSAKENINVEEMFNCI 164
>gi|303730|dbj|BAA02108.1| GTP-binding protein [Pisum sativum]
gi|738933|prf||2001457A GTP-binding protein
Length = 215
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 12/170 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GD +GK++ + ++ NE S G+ +T+ + G + IWD G
Sbjct: 13 FKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQTVEIDGKEVKAQIWDTAGQE 72
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFDDFVR 217
R + A L ++D++ R T +SI W E N + + +L+G K D
Sbjct: 73 RFRAVTSAYYRGAFGALVVYDISRRGTFDSIKRWLDELTTQNDSTVARMLVGNKCD---- 128
Query: 218 LPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKLFN 265
L+ + +A+A+ + LFF +SA + NV K F+ ++ +++N
Sbjct: 129 -LESLREVSTEEGKAFAE--EEGLFFMETSALDSTNVQKAFEIVIREIYN 175
>gi|403280619|ref|XP_003931813.1| PREDICTED: ras-related protein Rab-37 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 223
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 102 KISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ LLGD +GKT F+ + S + G++ NK + V G R+ IWD G
Sbjct: 31 KVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGMRVKLQIWDTAGQE 90
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
R +DA A+L ++D+T++ + ++I W +E ++ Q + I L+G K D
Sbjct: 91 RFRSVTHAYYRDAQALLLLYDITNKASFDNIRAWLTEIHEYAQRDVVIMLLGNKAD 146
>gi|357627683|gb|EHJ77299.1| small GTP binding protein RAB5 [Danaus plexippus]
Length = 209
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 8/171 (4%)
Query: 96 SDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWD 153
+ + K+ LLG+ +GK+S V ++V G E G + +TL + + F IWD
Sbjct: 16 TKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKFEIWD 75
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKF 212
G R P+ + A A + ++D+T++ T W E ++ +I I L G K
Sbjct: 76 TAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKS 135
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D + + + +A+AYA +SA +NVN IF I KL
Sbjct: 136 DLAAKRMVEFE-----EAQAYADENGLLFMETSAKTAMNVNDIFLAIANKL 181
>gi|444714079|gb|ELW54967.1| Ras-related protein Rab-5C [Tupaia chinensis]
Length = 216
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 13/192 (6%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGARI 147
+G + + K+ LLG+ +GK+S V ++V G E G + +T+ + +
Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTV 70
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 206
F IWD G R P+ + A A + ++D+T+ T W E ++ I I
Sbjct: 71 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIA 130
Query: 207 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL--- 263
L G K D + + Q +A+AYA +SA +NVN+IF I KL
Sbjct: 131 LAGNKADLASKRAVEFQ-----EAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKN 185
Query: 264 --FNLPWTVKRN 273
N P RN
Sbjct: 186 EPQNAPGAPGRN 197
>gi|320166151|gb|EFW43050.1| Rab21 [Capsaspora owczarzaki ATCC 30864]
Length = 202
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 8/164 (4%)
Query: 96 SDLVSLKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
D ++ KI LLG+ +GKTS V +Y N ++ + + + K L + G R+ +IWD
Sbjct: 2 GDSLTFKIVLLGEGCVGKTSLVLRYCENRFVDKHISTLQASFLTKRLNIGGKRVNLNIWD 61
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFD 213
G R PI +D+ + ++D+T + + W E +K I ++I
Sbjct: 62 TAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELKKMLGNDIALVIAGNKS 121
Query: 214 DFVRLPPDLQWTIATQ-ARAYAKAMKATLFFSSATHNINVNKIF 256
D + T++ + A YA ++ A F++SA + + ++F
Sbjct: 122 DLEK-----HRTVSAEAAEQYAASVGARHFYTSAKLSKGIEELF 160
>gi|307104270|gb|EFN52525.1| GTP binding protein [Chlorella variabilis]
Length = 211
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
L K+ LGD +GKTS + +++ ++ + + Q G++ ++KT+ ++ + +WD
Sbjct: 9 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 68
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFDD 214
G R +P +D+ + ++D+TSR + +I W E R + I +L+G K D
Sbjct: 69 GQERFRSLIPSYIRDSSVAVVVYDVTSRQSFLNIQRWVEEVRAERGSDVIIVLVGNKTD- 127
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNL 274
L Q +I + A A+ + +SA N+ +F+ I A LP N
Sbjct: 128 ---LVDKRQVSI-EEGDAKARELNVMFIETSAKAGFNIKALFRKIAAA---LPGMEALNS 180
Query: 275 TIGEPIID 282
E ++D
Sbjct: 181 AKQEDLVD 188
>gi|242036893|ref|XP_002465841.1| hypothetical protein SORBIDRAFT_01g046830 [Sorghum bicolor]
gi|241919695|gb|EER92839.1| hypothetical protein SORBIDRAFT_01g046830 [Sorghum bicolor]
Length = 200
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 70 SSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERS 127
SS P GL +S S TDS + K+ LLGD +GK+ V ++V G S
Sbjct: 4 SSSVPARSTGGLNTISNDSSPA--TDSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTS 61
Query: 128 LQMAGLNLINKTLMVQGARIA-FSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTL 186
G + +++TL ++ + I F IWD G R P+ + A A + ++D+TS +
Sbjct: 62 KVTVGASFLSQTLALEDSTIVKFEIWDTAGQERYAALAPLYYRGAAAAIVVYDITSPESF 121
Query: 187 NSIVGWYSEARKWNQTAIP-ILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFF-- 243
+ W E +K I +L+G K D D + + A+ YA+ K +FF
Sbjct: 122 SKAQYWVKELQKHGSPGIVMVLVGNKADLH-----DNRSVSSQDAQDYAE--KNNMFFIE 174
Query: 244 SSATHNINVNKIFKFIMAKL 263
+SA N+N++F+ I +L
Sbjct: 175 TSAKTADNINQLFEEIAKRL 194
>gi|123412712|ref|XP_001304133.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121885564|gb|EAX91203.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 191
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 9/171 (5%)
Query: 96 SDLVSLKISLLGDCQIGKTSFVKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
S+ +I +GD +GKTS + Y N + R++ G + V + + +WD
Sbjct: 3 SNETQPRIIFIGDSGVGKTSIIHYAKNGFFESRTMTTIGAGITQMETKVGNETVKYQLWD 62
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKF 212
G + VPI K A A + +F +T T + GW + + + I L+G K
Sbjct: 63 TAGQEMYRNIVPIYFKGATAAIIVFSVTDAETFRHLDGWIKQLQDHASEKVGIVLVGNKI 122
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D PD + I + AY K + ++SA N++ + I + L
Sbjct: 123 DS-----PDHKVEIE-EGNAYGKTYGYPVIYTSAVTGENIDVLIDHIASSL 167
>gi|119609583|gb|EAW89177.1| RAB37, member RAS oncogene family, isoform CRA_a [Homo sapiens]
Length = 189
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 102 KISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ LLGD +GKT F+ + S + G++ NK + V G R+ IWD G
Sbjct: 31 KVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQE 90
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
R +DA A+L ++D+T++ + ++I W +E ++ Q + I L+G K D
Sbjct: 91 RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKAD 146
>gi|407409243|gb|EKF32227.1| small GTP-binding protein RAB6, putative [Trypanosoma cruzi
marinkellei]
Length = 283
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 13/175 (7%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVG 155
+V KI LLGD +GKTS V +++ + ++ Q G++ +KT+ V + +WD
Sbjct: 39 VVKHKIVLLGDQSVGKTSLVTRFMYDTFDQQYQATIGIDFFSKTIPVDNRTVRLHVWDTA 98
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDD 214
G R +P +++ + ++D+TSR + W E R ++ I L+G K D
Sbjct: 99 GQERFRSLIPSYIRNSSGTIVVYDITSRASFLGTFKWIDEVRAERGDSVVIFLVGNKSD- 157
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFS--SATHNINVNKIFKFIMAKLFNLP 267
+ + + A KA + L F SA NV +F+ MA+L LP
Sbjct: 158 ------AQEKRVVSTEEAQKKAEEYNLVFMEVSAKQGKNVKALFR-KMAELLPLP 205
>gi|123392739|ref|XP_001300294.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736296|gb|AAX97477.1| small Rab GTPase RabF2 [Trichomonas vaginalis]
gi|121881309|gb|EAX87364.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 193
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 102 KISLLGDCQIGKTSFVKYVGNEQ-----ERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
K+ L+G GKTS V+ N Q S+Q A K +M+ G IWD G
Sbjct: 9 KVVLVGTTHTGKTSIVQRYVNGQFMINSVSSMQAA---FFQKNVMIGGKEQTLEIWDTAG 65
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFD-D 214
R P+ +DA + +FD+T + + W +E + +I +L+G K D +
Sbjct: 66 QERFRSLTPMYYRDARVAIVVFDITDANSFSKAKQWINELKSSRGDSISLVLVGNKSDLE 125
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
F+R+ ++A+ YAK + F +SA +N+ ++F
Sbjct: 126 FIRVVQ------MSEAKQYAKLLDIPYFETSAKTGVNIEEVF 161
>gi|41055758|ref|NP_957264.1| RAB5A, member RAS oncogene family, b [Danio rerio]
gi|29124637|gb|AAH49057.1| RAB5A, member RAS oncogene family like [Danio rerio]
Length = 216
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Query: 87 TFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQG 144
T +G +T + + K+ LLG+ +GK+S V ++V G E G + +TL +
Sbjct: 8 TRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDD 67
Query: 145 ARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI 204
+ F IWD G R P+ + A A + ++D+T+ + W E ++ I
Sbjct: 68 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 127
Query: 205 PI-LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
I L G K D + D Q A++YA +SA ++NV++IF I KL
Sbjct: 128 VIALAGNKADLANKRALDFQ-----DAQSYADDNSLLFMETSAKTSMNVSEIFMAIAKKL 182
>gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens]
Length = 218
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R + I I L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|440635533|gb|ELR05452.1| rab family, other [Geomyces destructans 20631-21]
Length = 219
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 5/173 (2%)
Query: 95 DSDLVSLKISLLGDCQIGKTSFV-KYVGNEQE--RSLQMAGLNLINKTLMVQGARIAFSI 151
++ K+ LLG+ +GK+S V ++V ++ + R + L + + + F I
Sbjct: 13 NARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDEATTVKFEI 72
Query: 152 WDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE-ARKWNQTAIPILIGT 210
WD G R P+ ++A + ++D+T +L+ W E R+ N+ I L G
Sbjct: 73 WDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIIIALAGN 132
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
K D V D + A AYAK F +SA + NV ++F I KL
Sbjct: 133 KL-DLVTEQQDKRVIQTADAEAYAKEAGLLFFETSAKTSENVRELFTAIAKKL 184
>gi|254939635|ref|NP_001157225.1| ras-related protein Rab-37 isoform 2 [Mus musculus]
gi|26337951|dbj|BAC32661.1| unnamed protein product [Mus musculus]
gi|148702511|gb|EDL34458.1| RAB37, member of RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 216
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 96 SDLVSLKISLLGDCQIGKTSFVKYVGNEQERSL-----QMAGLNLINKTLMVQGARIAFS 150
S+ V K L+GD +GKTS + V +Q + + G+ NK + V GAR+
Sbjct: 18 SEHVLHKTILVGDSGVGKTSLL--VQFDQGKFIPGSFSATVGIGFTNKVVTVDGARVKLQ 75
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 209
IWD G R +DA A+L ++D+T++ + ++I W +E ++ Q + I L+G
Sbjct: 76 IWDTAGQERFRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEYAQRDVVIMLLG 135
Query: 210 TKFD 213
K D
Sbjct: 136 NKAD 139
>gi|131849|sp|P22129.1|RB11B_DISOM RecName: Full=Ras-related protein Rab-11B; AltName: Full=ORA3;
Flags: Precursor
gi|213121|gb|AAA49233.1| GTP-binding protein [Discopyge ommata]
Length = 218
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R I I L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|395814868|ref|XP_003780961.1| PREDICTED: ras-related protein Rab-6A isoform 2 [Otolemur
garnettii]
Length = 208
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 88/189 (46%), Gaps = 8/189 (4%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGA 145
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 1 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAI 204
+ +WD G R +P +D+ + ++D+T+ + W + R + I
Sbjct: 61 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
Query: 205 PILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
+L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 121 IMLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALP 175
Query: 265 NLPWTVKRN 273
+ T R+
Sbjct: 176 GMESTQDRS 184
>gi|330822635|ref|XP_003291754.1| hypothetical protein DICPUDRAFT_156394 [Dictyostelium purpureum]
gi|325078046|gb|EGC31720.1| hypothetical protein DICPUDRAFT_156394 [Dictyostelium purpureum]
Length = 231
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 8/167 (4%)
Query: 102 KISLLGDCQIGKTSF-VKYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
K+ LLG +GKT+ ++Y G +R G + + KT+ ++G +I + IWD G R
Sbjct: 10 KVVLLGSSDVGKTAAAIRYAEGVFPKRPTPTIGASFLTKTINIEGNKIKYLIWDTAGQDR 69
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDFVRL 218
P+ + A + +FD+T + + +++ W E + Q I +++ G K D L
Sbjct: 70 FRSLTPMYYRGACVAILVFDITHQKSFDTVKDWVEELKSNIQEDIVLVVCGNKLD----L 125
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
Q T A+ YA +KA SA N V ++F I KL +
Sbjct: 126 QHKRQVKRET-AKMYADEIKALYVEISAKENEGVEQMFLEIARKLIS 171
>gi|168025719|ref|XP_001765381.1| Rab21-family small GTPase [Physcomitrella patens subsp. patens]
gi|162683434|gb|EDQ69844.1| Rab21-family small GTPase [Physcomitrella patens subsp. patens]
Length = 208
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 7/161 (4%)
Query: 98 LVSLKISLLGDCQIGKTSF-VKYVGNEQ-ERSLQMAGLNLINKTLMVQGARIAFSIWDVG 155
L+ + + LLGD ++GKTS ++Y+ N E+ + + + K L V G + IWD
Sbjct: 6 LIQINLVLLGDGRVGKTSLALRYINNVFFEKQMATIQASYLTKRLSVDGQDVNICIWDTT 65
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G R P +DA A L ++DL + + + + W E +K I + I D
Sbjct: 66 GQERFHGLGPFYYRDADAALLVYDLLDKDSFDRVKSWVRELKKMASKTIVLAIAGNKSDM 125
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
D + Y++++ A+ F +SA N + + F
Sbjct: 126 -----DQSRHVNMHDAVYSESIGASHFVASAKLNTGIEEAF 161
>gi|56967682|gb|AAW31990.1| CG2885 [Drosophila melanogaster]
Length = 195
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 8/168 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQ--ERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ +LGD +GK+ + +++ E+ L+ G+++ +++ + + +WD GD
Sbjct: 8 FKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDK 67
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVR 217
R +P + A IL ++D+TS + +I GW E R+ + + L+G K DD
Sbjct: 68 RFNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDD--- 124
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
P+ + Q YA SA +NV IF + +++
Sbjct: 125 --PNHRQVSMEQGFNYAHRQSLCFEEVSAKSGMNVYDIFSSLAMDIYH 170
>gi|5902040|ref|NP_009012.1| rab-like protein 2B isoform 2 [Homo sapiens]
gi|195963427|ref|NP_001124394.1| rab-like protein 2B isoform 2 [Homo sapiens]
gi|12229940|sp|Q9UNT1.1|RBL2B_HUMAN RecName: Full=Rab-like protein 2B
gi|5771392|gb|AAD51379.1|AF095352_1 RAB-like protein 2B [Homo sapiens]
Length = 228
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 26/173 (15%)
Query: 92 YDTDSDLVSLKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAF 149
YD D ++ KI LGD +GK+ ++ + Q + L L L T V G I
Sbjct: 16 YDADDNV---KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILV 72
Query: 150 SIWDVGGDSR------SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTA 203
WD G R S+ H AC + +FD+ + T ++ WY+E R++
Sbjct: 73 DFWDTAGQERFQSMHASYYHKAHAC------IMVFDVQRKVTYRNLSTWYTELREFRPEI 126
Query: 204 IPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
I++ K DD + ++ +AK L+F SA NV K+F
Sbjct: 127 PCIVVANKIDDI---------NVTQKSFNFAKKFSLPLYFVSAADGTNVVKLF 170
>gi|56790068|dbj|BAD82830.1| small GTPase EhRabF4 [Entamoeba histolytica]
Length = 211
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Query: 102 KISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
KI L+GD +GKTS V +Y G G N I + + QG I ++WD G +
Sbjct: 28 KICLVGDQSVGKTSLVNRYAKGGFSTNEKATIGANFIATSYIKQGQEIKLALWDTAGQEK 87
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDD 214
V + + + + ++D+T+R T I GWY E K + +L+G K D+
Sbjct: 88 YRSMVSMYYRGSRGAVIVYDVTNRTTFEDIRGWYDEIFKAEPDVVCMLVGNKADN 142
>gi|392588635|gb|EIW77967.1| ras-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 229
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 85/175 (48%), Gaps = 12/175 (6%)
Query: 99 VSLKISLLGDCQIGKTSFVKYVGNEQ----ERSLQMAGLNLINKTLMVQGARIAFSIWDV 154
V++K+ L+G+ +GK+S + +EQ + + G++ + V G ++ SIWD
Sbjct: 17 VNVKLLLIGNASVGKSSLLLRFSDEQWLPEDEATATIGVDFRVHKMEVNGRKVKLSIWDT 76
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFD 213
G R + A I+ ++D+++R T ++ W+SE + + T + I++G K D
Sbjct: 77 AGQERFRTITSSYYRGAQGIILVYDVSNRETFEALPRWFSEIETYVSPTVVRIIVGNKLD 136
Query: 214 -DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLP 267
+ R P ++ A+A+ A +SA + V + F+ ++ + + P
Sbjct: 137 KENSRQVP------TSEGAAFAERQDALFLEASAKTAVGVRETFEDVVRHILDTP 185
>gi|358249314|ref|NP_001240030.1| uncharacterized protein LOC100797258 [Glycine max]
gi|255645100|gb|ACU23049.1| unknown [Glycine max]
Length = 217
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 10/182 (5%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +TL V+G + IWD G
Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQE 72
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVR 217
R + A+ L ++D+T T ++ W E R I I LIG K D
Sbjct: 73 RYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIGNKTD---- 128
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLTIG 277
L+ A+ YA+ + +SA NV F+ I+A+++ + K++L+
Sbjct: 129 -LKHLRAVATEDAQGYAEKEGLSFIETSALEATNVENAFQTILAEIYRI--ISKKSLSSN 185
Query: 278 EP 279
+P
Sbjct: 186 DP 187
>gi|224120066|ref|XP_002331128.1| predicted protein [Populus trichocarpa]
gi|222872856|gb|EEF09987.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 8/169 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +TL V+G + IWD G
Sbjct: 13 FKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQE 72
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVR 217
R + A+ L ++D+T T ++ W E R + I I LIG K D
Sbjct: 73 RYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTD---- 128
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
L+ A++YA+ +SA NV+K F+ I+++++ +
Sbjct: 129 -LKHLRAVATEDAQSYAEKEGLAFVETSALEATNVDKAFQTILSEIYRI 176
>gi|170058469|ref|XP_001864935.1| ras-related protein Rab [Culex quinquefasciatus]
gi|167877567|gb|EDS40950.1| ras-related protein Rab [Culex quinquefasciatus]
Length = 203
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 7/166 (4%)
Query: 101 LKISLLGDCQIGKTSF-VKYVGNEQERS-LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ ++GD +GK+S +++ N S + G++ +T+++ G R+ IWD G
Sbjct: 9 FKLLIIGDSGVGKSSLLIRFSDNTFSGSYITTIGVDFKIRTVVINGERVKLQIWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R + ++ ++D+T+ + ++ W E +L+G K DD
Sbjct: 69 RFRTITNTYYRGTHGVIVVYDVTNGESFANVKRWLQEIESNCDVVNKVLVGNKNDD---- 124
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
P+ + I + +AK M LF +SA N+NV ++F I ++
Sbjct: 125 -PNRKVVITEDSDRFAKQMDIQLFETSAKDNLNVEEMFLAITEQVL 169
>gi|124512632|ref|XP_001349449.1| PfRab18, GTPase [Plasmodium falciparum 3D7]
gi|19310063|emb|CAD27350.1| Rab18 GTPase [Plasmodium falciparum]
gi|23499218|emb|CAD51298.1| PfRab18, GTPase [Plasmodium falciparum 3D7]
Length = 201
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Query: 106 LGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDH 163
+GD +GK+S + +Y N+ +E+ L G++ K L + I IWD G R
Sbjct: 16 VGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVGIWDTAGQERFRTL 75
Query: 164 VPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW--NQTAIPILIGTKFDDFVRLPPD 221
++A AI+ ++D T R + ++ W +E K+ N+ AI +L+ K D P+
Sbjct: 76 TSAYYRNAHAIILVYDCTVRESFENLDVWINEIDKYSTNKNAIKMLVANKID-----KPN 130
Query: 222 LQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLP-----WTVKRNLTI 276
+ T + + +A +SA ++IN+ F+ ++ ++ N P V +NL +
Sbjct: 131 HEVT-KDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLLELSIVTKNLKL 189
Query: 277 GEP 279
G+
Sbjct: 190 GKK 192
>gi|67469385|ref|XP_650671.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56467319|gb|EAL45284.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790150|dbj|BAD82871.1| small GTPase EhRabX23 [Entamoeba histolytica]
gi|449705577|gb|EMD45593.1| small GTPase EhRabX23, putative [Entamoeba histolytica KU27]
Length = 186
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 21/192 (10%)
Query: 96 SDLVSLKISLLGDCQIGKTSFVKYVGNEQERSLQMA-----GLNLINKTLMVQGARIAFS 150
D+ K+ +GDC +GKT + G ++ M+ G + + + + V +I
Sbjct: 2 EDICRHKVVFIGDCSVGKTCII---GRFTSKNFDMSYDATIGTDFVTQIMDVDNKKIELQ 58
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGT 210
IWD G R +P + A ++ ++D++ + T N+I W+ E T + I +G
Sbjct: 59 IWDTAGQERYRSLIPNYIRGASVVVIVYDISDKQTFNNIDHWFDEVPDRESTLVYI-VGN 117
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMK--ATLFFSSATHNINVNKIFKFIMAKLFNL-P 267
K D T+ K+ K A +SA +I + +F+ I + L L P
Sbjct: 118 KVD---------SQRGVTKEEGMQKSYKWSARFIETSALKDIGITDLFEDIASNLAPLAP 168
Query: 268 WTVKRNLTIGEP 279
+ L I EP
Sbjct: 169 KCTEAPLRINEP 180
>gi|294949590|ref|XP_002786273.1| Rab5B protein, putative [Perkinsus marinus ATCC 50983]
gi|239900430|gb|EER18069.1| Rab5B protein, putative [Perkinsus marinus ATCC 50983]
Length = 217
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 67 SSESSPAPDTMEAGLVEL--SRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNE 123
S+++ AP AG + + SR SG ++ KI LLGD +GK+S +++
Sbjct: 6 STDAGSAPGGRAAGGLNVTGSRASPSGIES-------KIVLLGDSGVGKSSMALRFCQGR 58
Query: 124 ----QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFD 179
E ++ A L I + L ++ IWD GG R P+ +DA + ++D
Sbjct: 59 FPPFHEVTIGAAFLQQIVR-LPSSNTQLKLHIWDTGGQERFRAMAPLYYRDAAGAVVVYD 117
Query: 180 LTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDFVRLPPDLQWTIATQARAYAKAMK 238
+ S+ + S+ W SE R + I + G K D LP Q +A + +
Sbjct: 118 VGSKESFESVKFWVSELRSKGPPDVRIAVAGNKAD----LPESDQVVTTQEAEEFCQENG 173
Query: 239 ATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRN 273
F +SA N+ K+F+ + +++N+ + +R+
Sbjct: 174 LLCFRTSAMTGANIGKLFEAVAEEVYNVIKSKQRS 208
>gi|148672384|gb|EDL04331.1| RAB, member of RAS oncogene family-like 2A, isoform CRA_b [Mus
musculus]
Length = 250
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 92 YDTDSDLVSLKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAF 149
YDT ++ KI LGD +GK+ ++ + Q + L L L T V G I
Sbjct: 16 YDTHENV---KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILV 72
Query: 150 SIWDVGGDSR------SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTA 203
WD G R S+ H AC + +FD+ + T ++ WY+E R++
Sbjct: 73 DFWDTAGQERFQSMHASYYHKAHAC------IMVFDVQRKITYKNLGTWYAELREFRPEI 126
Query: 204 IPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
IL+ K D D+Q T + ++AK L+F SA NV K+F
Sbjct: 127 PCILVANKID------ADIQMT--QKNFSFAKKFSLPLYFVSAADGTNVVKLF 171
>gi|449703887|gb|EMD44244.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 196
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 81/177 (45%), Gaps = 8/177 (4%)
Query: 99 VSLKISLLGDCQIGKTSFVKYVGNEQ--ERSLQMAGLNLINKTLMVQGARIAFSIWDVGG 156
+ +K+ ++G+ +GKT + ++Q E + G+ +++K + V G ++ IWD G
Sbjct: 1 MKMKLIMIGESSVGKTCCMNRFVSDQFSEVTKSTVGVGMVSKEMEVNGIKVKLQIWDTAG 60
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFV 216
R ++A+ + MFD+++R + ++ W K + + +L G K D
Sbjct: 61 QERFATLSSNYFRNAMGGVIMFDVSNRQSFENVSNWIDACNKIEEKRVLVLAGNKTD--- 117
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRN 273
D + + A AK F SA + +N++F+ + ++ LP +N
Sbjct: 118 ---LDERVITKEEGEARAKEFGLKYFEVSAKTGVGINEMFETLTKEIVALPKAEAQN 171
>gi|348500484|ref|XP_003437803.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
gi|410924493|ref|XP_003975716.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R I I L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|291384296|ref|XP_002708751.1| PREDICTED: RAB6A, member RAS oncogene family-like isoform 2
[Oryctolagus cuniculus]
gi|301759055|ref|XP_002915364.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Ailuropoda
melanoleuca]
gi|332211361|ref|XP_003254788.1| PREDICTED: ras-related protein Rab-6A isoform 1 [Nomascus
leucogenys]
gi|426245107|ref|XP_004016355.1| PREDICTED: ras-related protein Rab-6A [Ovis aries]
gi|296479823|tpg|DAA21938.1| TPA: RAB6A, member RAS oncogene family-like isoform 2 [Bos taurus]
gi|355566853|gb|EHH23232.1| hypothetical protein EGK_06662 [Macaca mulatta]
gi|355752448|gb|EHH56568.1| hypothetical protein EGM_06013 [Macaca fascicularis]
gi|380788413|gb|AFE66082.1| ras-related protein Rab-6A isoform b [Macaca mulatta]
gi|380788417|gb|AFE66084.1| ras-related protein Rab-6A isoform b [Macaca mulatta]
Length = 208
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 88/189 (46%), Gaps = 8/189 (4%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGA 145
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 1 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAI 204
+ +WD G R +P +D+ + ++D+T+ + W + R + I
Sbjct: 61 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
Query: 205 PILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
+L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 121 IMLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALP 175
Query: 265 NLPWTVKRN 273
+ T R+
Sbjct: 176 GMESTQDRS 184
>gi|409049886|gb|EKM59363.1| hypothetical protein PHACADRAFT_249809 [Phanerochaete carnosa
HHB-10118-sp]
Length = 365
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGN--EQERSLQMAGLNLINKTLMVQGARIAFSIWDVG 155
V KI ++G+ +GKTS + +Y N E + + G I+K L V G RI +WD
Sbjct: 19 VDAKIVVMGNTGVGKTSLLYRYTQNKFEPKNTTSTTGALFISKKLYVNGIRIRLQLWDTA 78
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKFD 213
G R P+ + A A L M+D+T+ + I GW E + + I ++G+K D
Sbjct: 79 GQERFRSMAPMYYRGAHAALLMYDITNAASFEDIRGWLEELKSNCSPDLIIYIVGSKAD 137
>gi|332375364|gb|AEE62823.1| unknown [Dendroctonus ponderosae]
Length = 213
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V+G + IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFD--DF 215
R + AV L ++D+ T ++ W E R +Q + +L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
+P D +A+AYA+ + + +SA + NV F I+ +++
Sbjct: 132 RAVPTD-------EAKAYAERNQLSFIETSALDSTNVEAAFTNILTEIY 173
>gi|67610128|ref|XP_667084.1| Rab5 [Cryptosporidium hominis TU502]
gi|54658188|gb|EAL36862.1| Rab5 [Cryptosporidium hominis]
Length = 218
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 75/182 (41%), Gaps = 15/182 (8%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQERSLQMAGLNLINKTLMVQGARI------AFSIWDV 154
LK+ LLGD +GK+ V ++ Q I M Q + F IWD
Sbjct: 14 LKLVLLGDASVGKSCLVVRFSKDEFHEYQEP---TIGAAFMTQSVNVDDDYTVKFEIWDT 70
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
G R P+ + A A + ++D+T+ T W SE + N I + L+G K+D
Sbjct: 71 AGQERYRSLAPMYYRGAAAAIVVYDITNVETFQGAKSWISELQNINNNDIVVALVGNKYD 130
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRN 273
D + AR YAK F +SA NV ++F+ I KL N N
Sbjct: 131 LESSRTVD-----SETARNYAKEKGILSFETSAKTGYNVQELFEEIARKLPNTKKLDSNN 185
Query: 274 LT 275
++
Sbjct: 186 MS 187
>gi|508285|gb|AAA74081.1| Rab5c-like protein, similar to Canis familiaris Rab5c protein, PIR
Accession Number S38625 [Homo sapiens]
gi|642532|gb|AAB08927.1| ras-related small GTP binding protein Rab5 [Homo sapiens]
Length = 216
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 12/193 (6%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGARI 147
+G + + K+ LLG+ +GK+S V ++V G E G + +T+ + +
Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTV 70
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 206
F IWD G R P+ + A A + ++D+T+ T W E ++ I I
Sbjct: 71 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIA 130
Query: 207 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
L G K D + + Q +A+AYA +SA +NVN+IF I K L
Sbjct: 131 LAGNKADLASKRAVEFQ-----EAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---L 182
Query: 267 PWTVKRNLTIGEP 279
P +N T G P
Sbjct: 183 PKNEPQNAT-GAP 194
>gi|149054742|gb|EDM06559.1| rCG35079, isoform CRA_a [Rattus norvegicus]
Length = 216
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 96 SDLVSLKISLLGDCQIGKTSFVKYVGNEQERSL-----QMAGLNLINKTLMVQGARIAFS 150
S+ V K L+GD +GKTS + V +Q + + G+ NK + V GAR+
Sbjct: 18 SEHVLHKTILVGDSGVGKTSLL--VQFDQGKFIPGSFSATVGIGFTNKVVTVDGARVKLQ 75
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 209
IWD G R +DA A+L ++D+T++ + ++I W +E ++ Q + I L+G
Sbjct: 76 IWDTAGQERFRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEYAQRDVVIMLLG 135
Query: 210 TKFD 213
K D
Sbjct: 136 NKAD 139
>gi|27066019|pdb|1N6P|A Chain A, Crystal Structure Of Human Rab5a A30e Mutant Complex With
Gppnhp
Length = 170
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 8/169 (4%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVG 155
+ K+ LLG+ ++GK+S V ++V G E G + +T+ + + F IWD
Sbjct: 4 ICQFKLVLLGESEVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 63
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDD 214
G R P+ + A A + ++D+T+ + W E ++ I I L G K D
Sbjct: 64 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 123
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
+ D Q +A++YA +SA ++NVN+IF I KL
Sbjct: 124 ANKRAVDFQ-----EAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 167
>gi|13195674|ref|NP_077249.1| ras-related protein Rab-6A isoform 2 [Mus musculus]
gi|13638404|sp|P35279.4|RAB6A_MOUSE RecName: Full=Ras-related protein Rab-6A; Short=Rab-6
gi|313104164|sp|Q9WVB1.2|RAB6A_RAT RecName: Full=Ras-related protein Rab-6A; Short=Rab-6
gi|7670415|dbj|BAA95059.1| unnamed protein product [Mus musculus]
gi|26341820|dbj|BAC34572.1| unnamed protein product [Mus musculus]
gi|26350389|dbj|BAC38834.1| unnamed protein product [Mus musculus]
gi|26350969|dbj|BAC39121.1| unnamed protein product [Mus musculus]
gi|74144412|dbj|BAE36058.1| unnamed protein product [Mus musculus]
gi|74146903|dbj|BAE41406.1| unnamed protein product [Mus musculus]
gi|74227574|dbj|BAE35649.1| unnamed protein product [Mus musculus]
gi|112292961|dbj|BAF02858.1| Rab6A [Mus musculus]
gi|148684515|gb|EDL16462.1| RAB6, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148684520|gb|EDL16467.1| RAB6, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149068773|gb|EDM18325.1| rCG39700, isoform CRA_b [Rattus norvegicus]
gi|149068775|gb|EDM18327.1| rCG39700, isoform CRA_b [Rattus norvegicus]
Length = 208
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 88/189 (46%), Gaps = 8/189 (4%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGA 145
S+G D + L K+ LG+ +GKTS + +++ + + + Q G++ ++KT+ ++
Sbjct: 1 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAI 204
+ +WD G R +P +D+ + ++D+T+ + W + R + I
Sbjct: 61 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
Query: 205 PILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
+L+G K D L Q +I R AK + +SA NV ++F+ + A L
Sbjct: 121 IMLVGNKTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALP 175
Query: 265 NLPWTVKRN 273
+ T R+
Sbjct: 176 GMESTQDRS 184
>gi|334326820|ref|XP_001376337.2| PREDICTED: ras-related protein Rab-11B-like [Monodelphis domestica]
Length = 218
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 94 TDSDLVSL--KISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAF 149
T S L+SL K L+GD +GK++ + ++ NE S G+ +++ V G I
Sbjct: 3 TASYLISLICKFVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA 62
Query: 150 SIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LI 208
IWD G R + AV L ++D+ T ++ W E R I I L+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLV 122
Query: 209 GTKFD--DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
G K D +P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 123 GNKSDLRHLRAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|29841146|gb|AAP06159.1| similar to NM_078963 GTP-binding protein rab3A in Drosophila
melanogaster [Schistosoma japonicum]
gi|226480624|emb|CAX73409.1| Rab-protein 8 [Schistosoma japonicum]
Length = 216
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQERS--LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ ++G+ +GKTSF+ ++ S + G++ KT+ Q R+ IWD G
Sbjct: 16 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTIFRQDKRVKLQIWDTAGQE 75
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWN-QTAIPILIGTKFDDFVR 217
R + A+ + M+D+T+ + N++ W ++ + ++ A +L+G K D
Sbjct: 76 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWVTQIKTYSWDNAQVVLVGNKCD---- 131
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFK 257
L D ++ + R A + F +SA NINV +F+
Sbjct: 132 LVDDRVVSV-DRGRHLAHQLGLEFFEASAKENINVKNVFE 170
>gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [synthetic construct]
Length = 219
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R + I I L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|395841772|ref|XP_003793707.1| PREDICTED: ras-related protein Rab-11B [Otolemur garnettii]
Length = 249
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 43 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 102
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R + I I L+G K D
Sbjct: 103 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 162
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 163 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 206
>gi|66548006|ref|XP_393353.2| PREDICTED: ras-related protein Rab-21 [Apis mellifera]
Length = 222
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 88 FSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNE-QERSLQMAGLNLINKTLMVQGA 145
+S +++ + K+ LLG+ +GKTS ++YV N+ +R + + +NK L +
Sbjct: 1 MASSISNTNNVYNFKVVLLGEGCVGKTSVALRYVENKFNDRHISTLQASFLNKKLTIHEK 60
Query: 146 RIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP 205
++ +IWD G + PI + + + ++D+T T ++ W +E RK + I
Sbjct: 61 KVNLAIWDTAGQEKFHALGPIYYRMSNGAIIVYDVTDYDTFLRVINWVTELRKMLGSGIC 120
Query: 206 ILI-GTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
+ I G K D L D + I +A +A A F SA N N+ ++F
Sbjct: 121 LAIAGNKID----LEKDRRVYIE-EAEEFANKAGAMHFHISAKLNENIEEMF 167
>gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|148237448|ref|NP_001087959.1| uncharacterized protein LOC494642 [Xenopus laevis]
gi|52078458|gb|AAH82421.1| LOC494642 protein [Xenopus laevis]
gi|54037941|gb|AAH84173.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|89267988|emb|CAJ81987.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271367|emb|CAJ83815.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 218
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R I I L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|407040921|gb|EKE40414.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 186
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 21/192 (10%)
Query: 96 SDLVSLKISLLGDCQIGKTSFVKYVGNEQERSLQMA-----GLNLINKTLMVQGARIAFS 150
D+ K+ +GDC +GKT + G ++ M+ G + + + + V +I
Sbjct: 2 EDICRHKVVFIGDCSVGKTCII---GRFTSKNFDMSYDATIGTDFVTQIMDVDNKKIELQ 58
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGT 210
IWD G R +P + A ++ ++D++ + T N+I W+ E T + I +G
Sbjct: 59 IWDTAGQERYRSLIPNYIRGASVVVIVYDISDKQTFNNIDHWFDEVPDRESTLVYI-VGN 117
Query: 211 KFDDFVRLPPDLQWTIATQARAYAKAMK--ATLFFSSATHNINVNKIFKFIMAKLFNL-P 267
K D + T+ K+ K A +SA +I + +F+ I + L L P
Sbjct: 118 KVDSERGV---------TKEEGMQKSYKWSARFIETSALKDIGITDLFEDIASNLAPLAP 168
Query: 268 WTVKRNLTIGEP 279
+ L I EP
Sbjct: 169 KCTEAPLRINEP 180
>gi|406604644|emb|CCH43902.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 203
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 14/193 (7%)
Query: 85 SRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYVGNEQERS-LQMAGLNLINKTLMV 142
+RT S YD+ LK+ L+GD +GK+ + ++V ++ S + G++ +T+ +
Sbjct: 3 TRTPSRAYDS-----ILKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIEI 57
Query: 143 QGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQ 201
G RI +WD G R + A I+ ++D+T T ++ W+ + N+
Sbjct: 58 DGKRIKLQVWDTAGQERFRTITTAYYRGATGIILVYDVTDERTFENVRNWFQTVHQHANE 117
Query: 202 TAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMA 261
IL+G K D+ DL+ + + + A+ + +SA N NV+++F F +A
Sbjct: 118 DTQLILVGNKNDE-----KDLRAVSSERGESLAQELGIPFLEASAKTNDNVDELF-FKLA 171
Query: 262 KLFNLPWTVKRNL 274
K+ NL
Sbjct: 172 KIIQENNKSNENL 184
>gi|323309243|gb|EGA62464.1| Sec4p [Saccharomyces cerevisiae FostersO]
Length = 186
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 12/181 (6%)
Query: 79 AGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNEQERS-LQMAGLNLI 136
+GL +S + +G DS +KI L+GD +GK+ V++V ++ S + G++
Sbjct: 2 SGLRTVSASSGNGKSYDS---IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFK 58
Query: 137 NKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEA 196
KT+ + G ++ +WD G R + A+ I+ ++D+T T +I W+
Sbjct: 59 IKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTV 118
Query: 197 RKW-NQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKI 255
+ N A +L+G K D R+ A Q A AK + SSA ++ NVN+
Sbjct: 119 NEHANDEAQLLLVGNKSDMETRV------VTADQGEALAKELGIPFIESSAKNDDNVNEX 172
Query: 256 F 256
F
Sbjct: 173 F 173
>gi|297701715|ref|XP_002827851.1| PREDICTED: ras-related protein Rab-37 isoform 1 [Pongo abelii]
Length = 221
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 102 KISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ LLGD +GKT F+ + S + G++ NK + V G R+ IWD G
Sbjct: 31 KVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQE 90
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
R +DA A+L ++D+T++ + ++I W +E ++ Q + I L+G K D
Sbjct: 91 RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKAD 146
>gi|67472102|ref|XP_651915.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978608|dbj|BAD34971.1| EhRab7D protein [Entamoeba histolytica]
gi|56468706|gb|EAL46529.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449709825|gb|EMD49016.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 204
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 11/163 (6%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQERSLQMA--GLNLINKTLMVQGARIAFSIWDVGGDS 158
K L+GD +GKTS + N Q + A G + + K + V GA+ IWD G
Sbjct: 8 FKAILIGDSGVGKTSLINRYVNNQFSDVYKATIGSDFLIKPVTVNGAQYTLQIWDTAGHE 67
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSE----ARKWNQTAIPI-LIGTKFD 213
R V + + + FD+T+R + N + W +E A N +IPI ++G K D
Sbjct: 68 RYSCVVTTFYRGSDCCVLCFDVTNRDSFNHLEKWKNEFIDGANATNPASIPIYVVGNKID 127
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
P+ + QAR + K F +SA + NV +F
Sbjct: 128 ----CEPNKREVSQEQAREWCKLNGHKYFETSAMNAENVTDLF 166
>gi|297796867|ref|XP_002866318.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
gi|297312153|gb|EFH42577.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 8/169 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GD +GK++ + ++ NE S G+ +TL V+G + IWD G
Sbjct: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQE 72
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDDFVR 217
R + AV L ++D+T R T ++++ W E R + I I++ G K D
Sbjct: 73 RYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKAD---- 128
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
L+ + A+ + +SA NV K F+ ++A+++++
Sbjct: 129 -LNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHI 176
>gi|294888082|ref|XP_002772341.1| Rab18 GTPase, putative [Perkinsus marinus ATCC 50983]
gi|239876460|gb|EER04157.1| Rab18 GTPase, putative [Perkinsus marinus ATCC 50983]
Length = 193
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 90/182 (49%), Gaps = 13/182 (7%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
K+ ++GD +GK+ + ++ +E ++ L G++ K L + G R+ +IWD G R
Sbjct: 11 KLLIIGDSGVGKSCLLLRFCDDEFNDKQLATIGVDFKVKYLSLMGKRLKLAIWDTAGQER 70
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW--NQTAIPILIGTKFDDFVR 217
+ A I+ ++D+TSR + ++ W E RK+ +++++ +L+ K D
Sbjct: 71 FRTLTSSYYRGAQGIVLVYDVTSRESFENLEYWLEEVRKYATSRSSVKMLVANKVD---- 126
Query: 218 LPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKLFNLPWTVKRNLT 275
++ T+ A++ + F SSA + V +IF+ ++ K+ + P ++
Sbjct: 127 ---EVNGGDVTRREGEKFAIEHDMLFIESSAKLKVGVKEIFQQLVLKILDTPDLLQNTTP 183
Query: 276 IG 277
+G
Sbjct: 184 LG 185
>gi|193606029|ref|XP_001944241.1| PREDICTED: ras-related protein Rab-5C-like [Acyrthosiphon pisum]
Length = 211
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 10/175 (5%)
Query: 93 DTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGARIAFS 150
T + K+ LLG+ +GK+S V ++V G E G + +T+ + + F
Sbjct: 13 QTPGKICQFKLVLLGESSVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTIHLNDVAVKFE 72
Query: 151 IWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIG 209
IWD G R P+ + A A + ++D+T++ T W E ++ I I L G
Sbjct: 73 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFERAKNWVKELQRQATPGIVIALAG 132
Query: 210 TKFDDFVRLPPDLQWTIATQARAYAKAMKATLFF-SSATHNINVNKIFKFIMAKL 263
K D + +Q T +Q AY + LF +SA + NV +IFK I KL
Sbjct: 133 NKLD--LNTMRSVQ-TDESQTYAYENGL---LFMETSAKTSANVTEIFKAIAEKL 181
>gi|118482090|gb|ABK92976.1| unknown [Populus trichocarpa]
Length = 200
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 18/173 (10%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNE----QERSLQMAGLNLINKTLMVQGARIAFSIWD 153
++ K+ LLGD GK+S V ++V + QE ++ G ++TL V A + F IWD
Sbjct: 9 INAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTI---GAAFFSQTLAVNDATVKFEIWD 65
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKF 212
G R P+ + A A + ++D++++ + W E + + N + L G K
Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIIVYDISNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKL 263
D D + A +A+ +A+ + LFF +SA NVN IF I +L
Sbjct: 126 DLL-----DARKVAAEEAQVFAQ--ENGLFFMETSAKTATNVNDIFYEIAKRL 171
>gi|431906666|gb|ELK10787.1| Ras-related protein Rab-26 [Pteropus alecto]
Length = 284
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 11/202 (5%)
Query: 72 PAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFVKYVGNEQERS---L 128
P P GL++ R S G D V+ K+ L+GD +GKT + + + +
Sbjct: 36 PGPQVPPNGLLQPGRP-SLGGGGDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFI 94
Query: 129 QMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNS 188
G++ NK L V G ++ IWD G R +DA A+L ++D+T++ + ++
Sbjct: 95 STVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDN 154
Query: 189 IVGWYSEARKWNQ-TAIPILIGTKFDDFVRLPPDLQWTIATQAR-AYAKAMKATLFFSSA 246
I W +E +++ Q + +L+G K P ++ R A + +L+ +
Sbjct: 155 IQAWLTEIQEYAQHDVVLMLLGNKVGI-----PTCPLQPGSEGRLAPGQLSPRSLYQVDS 209
Query: 247 THNINVNKIFKFIMAKLFNLPW 268
T V + +AK + LP+
Sbjct: 210 TQERVVKREDGEKLAKEYGLPF 231
>gi|395749413|ref|XP_003778939.1| PREDICTED: ras-related protein Rab-37 [Pongo abelii]
Length = 194
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 102 KISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ LLGD +GKT F+ + S + G++ NK + V G R+ IWD G
Sbjct: 4 KVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQE 63
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
R +DA A+L ++D+T++ + ++I W +E ++ Q + I L+G K D
Sbjct: 64 RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKAD 119
>gi|66359380|ref|XP_626868.1| Rab5 like small GTpase [Cryptosporidium parvum Iowa II]
gi|46228121|gb|EAK89020.1| Rab5 like small GTpase [Cryptosporidium parvum Iowa II]
Length = 218
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 72/172 (41%), Gaps = 15/172 (8%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQERSLQMAGLNLINKTLMVQGARI------AFSIWDV 154
LK+ LLGD +GK+ V ++ Q I M Q + F IWD
Sbjct: 14 LKLVLLGDASVGKSCLVVRFSKDEFHEYQEP---TIGAAFMTQSVNVDDDYTVKFEIWDT 70
Query: 155 GGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
G R P+ + A A + ++D+T+ T W SE + N I + L+G K+D
Sbjct: 71 AGQERYRSLAPMYYRGAAAAIVVYDITNVETFQGAKSWISELQNINNNDIVVALVGNKYD 130
Query: 214 DFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
D + AR YAK F +SA NV ++F+ I KL N
Sbjct: 131 LESSRTVD-----SETARNYAKEKGILSFETSAKTGYNVQELFEEIARKLPN 177
>gi|10880926|gb|AAG24438.1|AF304518_1 small GTP-binding protein RAB5B [Oryza sativa]
gi|5931625|dbj|BAA84717.1| rab5B [Oryza sativa Japonica Group]
Length = 199
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 70 SSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERS 127
SS P GL +S S+ TDS + K+ LLGD +GK+ V ++V G S
Sbjct: 4 SSSVPARSTGGLNNISNDNSA---TDSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
Query: 128 LQMAGLNLINKTLMVQGARIA-FSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTL 186
G + +++TL ++ + I F IWD G R P+ + A A + ++D+TS +
Sbjct: 61 KVTVGASFLSQTLALEDSTIVKFEIWDTAGQERYAALAPLYYRGAAAAVVVYDITSPESF 120
Query: 187 NSIVGWYSEARKWNQTA-IPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSS 245
+ W E +K I +L+G K D + + +A+ YA+ +S
Sbjct: 121 SKAQYWVKELQKHGSPDIIMVLVGNKADLHKN-----RHVSSQEAQEYAEKNNMVFIETS 175
Query: 246 ATHNINVNKIFKFIMAKL 263
A N+N++F+ I +L
Sbjct: 176 AKTADNINQVFEEIAKRL 193
>gi|256082187|ref|XP_002577342.1| rab 3 and [Schistosoma mansoni]
Length = 236
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 8/159 (5%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQERS--LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ ++G+ +GKTSF+ ++ S + G++ KT+ Q R+ IWD G
Sbjct: 35 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTIFRQDKRVKLQIWDTAGQE 94
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWN-QTAIPILIGTKFDDFVR 217
R + A+ + M+D+T+ + N++ W ++ + ++ A +L+G K D
Sbjct: 95 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWVTQIKTYSWDNAQVVLVGNKCD---- 150
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
L D ++ + R A + F +SA N+NV +F
Sbjct: 151 LVDDRAVSV-DRGRHLAHQLGLEFFEASAKENVNVKNVF 188
>gi|41393545|ref|NP_004574.2| ras-related protein Rab-5C isoform a [Homo sapiens]
gi|41393614|ref|NP_958842.1| ras-related protein Rab-5C isoform a [Homo sapiens]
gi|197101217|ref|NP_001127529.1| ras-related protein Rab-5C [Pongo abelii]
gi|350539365|ref|NP_001233312.1| ras-related protein Rab-5C [Pan troglodytes]
gi|388454362|ref|NP_001253100.1| ras-related protein Rab-5C [Macaca mulatta]
gi|332260865|ref|XP_003279501.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Nomascus
leucogenys]
gi|332260867|ref|XP_003279502.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Nomascus
leucogenys]
gi|397485574|ref|XP_003813918.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Pan paniscus]
gi|397485576|ref|XP_003813919.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Pan paniscus]
gi|397485580|ref|XP_003813921.1| PREDICTED: ras-related protein Rab-5C isoform 4 [Pan paniscus]
gi|426348253|ref|XP_004041752.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Gorilla gorilla
gorilla]
gi|426348259|ref|XP_004041755.1| PREDICTED: ras-related protein Rab-5C isoform 4 [Gorilla gorilla
gorilla]
gi|441677628|ref|XP_004092752.1| PREDICTED: ras-related protein Rab-5C [Nomascus leucogenys]
gi|441677631|ref|XP_004092753.1| PREDICTED: ras-related protein Rab-5C [Nomascus leucogenys]
gi|38258923|sp|P51148.2|RAB5C_HUMAN RecName: Full=Ras-related protein Rab-5C; AltName: Full=L1880;
AltName: Full=RAB5L
gi|75054865|sp|Q5R7L7.1|RAB5C_PONAB RecName: Full=Ras-related protein Rab-5C
gi|7672665|gb|AAF66594.1|AF141304_1 small GTPase [Homo sapiens]
gi|20379052|gb|AAM21086.1|AF498938_1 small GTP binding protein RAB5C [Homo sapiens]
gi|49456757|emb|CAG46699.1| RAB5C [Homo sapiens]
gi|54695838|gb|AAV38291.1| RAB5C, member RAS oncogene family [Homo sapiens]
gi|55731054|emb|CAH92243.1| hypothetical protein [Pongo abelii]
gi|60822879|gb|AAX36624.1| RAB5C member RAS oncogene family [synthetic construct]
gi|61356072|gb|AAX41205.1| RAB5C member RAS oncogene family [synthetic construct]
gi|76779854|gb|AAI06040.1| RAB5C, member RAS oncogene family [Homo sapiens]
gi|109731489|gb|AAI14440.1| RAB5C, member RAS oncogene family [Homo sapiens]
gi|119581209|gb|EAW60805.1| RAB5C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119581210|gb|EAW60806.1| RAB5C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119581211|gb|EAW60807.1| RAB5C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|190689983|gb|ACE86766.1| RAB5C, member RAS oncogene family protein [synthetic construct]
gi|190691355|gb|ACE87452.1| RAB5C, member RAS oncogene family protein [synthetic construct]
gi|261860716|dbj|BAI46880.1| RAB5C, member RAS oncogene family [synthetic construct]
gi|343960018|dbj|BAK63863.1| ras-related protein Rab-5C [Pan troglodytes]
gi|355568697|gb|EHH24978.1| RAB5L [Macaca mulatta]
gi|355754177|gb|EHH58142.1| hypothetical protein EGM_07930 [Macaca fascicularis]
gi|380815232|gb|AFE79490.1| ras-related protein Rab-5C isoform a [Macaca mulatta]
gi|383411673|gb|AFH29050.1| ras-related protein Rab-5C isoform a [Macaca mulatta]
gi|384941764|gb|AFI34487.1| ras-related protein Rab-5C isoform a [Macaca mulatta]
Length = 216
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 12/193 (6%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGARI 147
+G + + K+ LLG+ +GK+S V ++V G E G + +T+ + +
Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTV 70
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 206
F IWD G R P+ + A A + ++D+T+ T W E ++ I I
Sbjct: 71 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIA 130
Query: 207 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
L G K D + + Q +A+AYA +SA +NVN+IF I K L
Sbjct: 131 LAGNKADLASKRAVEFQ-----EAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKK---L 182
Query: 267 PWTVKRNLTIGEP 279
P +N T G P
Sbjct: 183 PKNEPQNAT-GAP 194
>gi|77736431|ref|NP_001029915.1| ras-related protein Rab-5C [Bos taurus]
gi|346716331|ref|NP_001231183.1| ras-related protein Rab-5C [Sus scrofa]
gi|410981133|ref|XP_003996927.1| PREDICTED: ras-related protein Rab-5C [Felis catus]
gi|426238047|ref|XP_004012969.1| PREDICTED: ras-related protein Rab-5C [Ovis aries]
gi|75052596|sp|Q58DS9.1|RAB5C_BOVIN RecName: Full=Ras-related protein Rab-5C
gi|61553191|gb|AAX46365.1| RAB5C, member RAS oncogene family isoform b [Bos taurus]
gi|109659170|gb|AAI18227.1| RAB5C, member RAS oncogene family [Bos taurus]
gi|296476370|tpg|DAA18485.1| TPA: ras-related protein Rab-5C [Bos taurus]
gi|440903244|gb|ELR53931.1| Ras-related protein Rab-5C [Bos grunniens mutus]
Length = 216
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 8/177 (4%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGARI 147
+G + + K+ LLG+ +GK+S V ++V G E G + +T+ + +
Sbjct: 11 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTV 70
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 206
F IWD G R P+ + A A + ++D+T+ T W E ++ I I
Sbjct: 71 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIA 130
Query: 207 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
L G K D + + Q +A+AYA+ +SA +NVN+IF I KL
Sbjct: 131 LAGNKADLASKRAVEFQ-----EAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|357146391|ref|XP_003573975.1| PREDICTED: ras-related protein RABF1-like [Brachypodium distachyon]
Length = 200
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 18/201 (8%)
Query: 70 SSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERS 127
SS P GL ++ S+ TDS + +K+ LLGD +GK+ V ++V G S
Sbjct: 4 SSSLPANNAGGLSNINNENSA---TDSKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
Query: 128 LQMAGLNLINKTLMVQGAR-IAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTL 186
G + +++TL ++ + + F IWD G R P+ + A A + ++D+TS +
Sbjct: 61 KVTVGASFLSQTLALEDSTTVKFEIWDTAGQERYAALAPLYYRGAGAAVVVYDITSAESF 120
Query: 187 NSIVGWYSEARK-WNQTAIPILIGTKFDDFVRLPPDLQWTIATQ-ARAYAKAMKATLFF- 243
+ W E +K +Q + L+G K D + T+++Q A+ YA+ + ++FF
Sbjct: 121 SKAQYWVKELQKHGSQDMVMALVGNKADLHEKR------TVSSQDAQEYAE--RNSMFFV 172
Query: 244 -SSATHNINVNKIFKFIMAKL 263
+SA N+N++F+ I +L
Sbjct: 173 ETSAKTADNINQLFEEIAKRL 193
>gi|340723572|ref|XP_003400163.1| PREDICTED: ras-related protein RabJ-like [Bombus terrestris]
Length = 220
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 9/180 (5%)
Query: 99 VSLKISLLGDCQIGKTSFV-KYVGNEQERSLQ-MAGLNLINKTLMVQGARIAFSIWDVGG 156
+ KI +LG +GKTS + +Y+G + G + N L +Q I +WD G
Sbjct: 3 IEAKIVVLGSQGVGKTSMIMRYIGKTYNSQVNPTIGASFFNCKLNIQDTGIMLRVWDTAG 62
Query: 157 DSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKFDDF 215
R P+ ++A A + +FDLT T ++ W +E R+ +T + ++IG K D
Sbjct: 63 QERFRSMAPMYYRNANAAMLVFDLTQYNTFAAMKRWVTELRRNVEETLVLVVIGNKSDLI 122
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRNLT 275
+ + A + R YA + A+ +S + +F + L L T RN T
Sbjct: 123 EKRQVN-----AEEGRLYATKIGASYHETSVLQGEGIENVFLTVARGLLGLSST-DRNST 176
>gi|332240060|ref|XP_003269208.1| PREDICTED: ras-related protein Rab-26 [Nomascus leucogenys]
Length = 271
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 91/213 (42%), Gaps = 12/213 (5%)
Query: 55 PAVRYQKLTRRSSSESSPAPDTMEAGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKT 114
PA + R ++ S PD G ++ R S G D V+ K+ L+GD +GKT
Sbjct: 36 PAANGARPARSGTARS--GPDAPPNGPLQAGRP-SLGGGGDFYDVAFKVMLVGDSGVGKT 92
Query: 115 SF-VKYVGNE--QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDA 171
V++ + G++ NK L V G ++ +WD G R +DA
Sbjct: 93 CLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDA 152
Query: 172 VAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVRLPPDLQWTIATQA 230
A+L ++D+T++ + ++I W +E ++ Q + + L+G K D +
Sbjct: 153 HALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAHE-----RAVKREDG 207
Query: 231 RAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
AK +SA +NV+ F I +L
Sbjct: 208 EKLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 240
>gi|183233500|ref|XP_654217.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169801546|gb|EAL48831.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449701817|gb|EMD42563.1| small GTPase EhRabF4, putative [Entamoeba histolytica KU27]
Length = 190
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Query: 102 KISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
KI L+GD +GKTS V +Y G G N I + + QG I ++WD G +
Sbjct: 7 KICLVGDQSVGKTSLVNRYAKGGFSTNEKATIGANFIATSYIKQGQEIKLALWDTAGQEK 66
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDD 214
V + + + + ++D+T+R T I GWY E K + +L+G K D+
Sbjct: 67 YRSMVSMYYRGSRGAVIVYDVTNRTTFEDIRGWYDEIFKAEPDVVCMLVGNKADN 121
>gi|123430802|ref|XP_001307966.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121889622|gb|EAX95036.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 189
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
K+ +G+ +GKTS + +Y N E +L G N T+ + + ++WD G R
Sbjct: 4 KVPFVGNPSVGKTSIISRYASNVFNEETLPTVGACNFNFTINLNDEEVVMNVWDTAGQER 63
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVRL 218
VP+ + + I+ FD++ T ++ WY + R PI L+ K D ++
Sbjct: 64 FRSLVPLYTRGSSLIVITFDISEIETFKAVDDWYQKLRDEFGMKCPIFLVANKMDLDPKV 123
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 259
P + +++A+A + FF+SA N + ++F I
Sbjct: 124 P-------INEIKSWAQAHQCQAFFTSAMTNRGIEELFTTI 157
>gi|50540176|ref|NP_001002555.1| ras-related protein Rab-11B [Danio rerio]
gi|326665348|ref|XP_003198017.1| PREDICTED: ras-related protein Rab-11B-like isoform 1 [Danio rerio]
gi|326665350|ref|XP_003198018.1| PREDICTED: ras-related protein Rab-11B-like isoform 2 [Danio rerio]
gi|49904559|gb|AAH76247.1| Zgc:92772 [Danio rerio]
Length = 218
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R I I L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|68075529|ref|XP_679683.1| Rab18 GTPase [Plasmodium berghei strain ANKA]
gi|56500482|emb|CAH95262.1| Rab18 GTPase, putative [Plasmodium berghei]
Length = 201
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 15/183 (8%)
Query: 106 LGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSRSFDH 163
+GD +GK+S + +Y N+ +E+ L G++ K L + I IWD G R
Sbjct: 16 VGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVGIWDTAGQERFRTL 75
Query: 164 VPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW--NQTAIPILIGTKFDDFVRLPPD 221
++A AI+ ++D T R + ++ W E K+ N+ AI +L+ K D P+
Sbjct: 76 TSAYYRNAHAIILVYDCTVRESFENLDVWIHEIDKYSTNKNAIKMLVANKID-----KPN 130
Query: 222 LQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLP-----WTVKRNLTI 276
+ T + + +A +SA ++IN+ F+ ++ ++ N P V +NL +
Sbjct: 131 HEVT-KDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLLELSVVTKNLKL 189
Query: 277 GEP 279
G+
Sbjct: 190 GKK 192
>gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R I I L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 132 RAVPTD-------EARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|410919323|ref|XP_003973134.1| PREDICTED: ras-related protein Rab-22A-like [Takifugu rubripes]
Length = 194
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 98 LVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQ-MAGLNLINKTLMVQGARIAFSIWDVG 155
L LK+ LLG+ +GK+S V ++V + + ++ G + + KT+ Q F IWD
Sbjct: 3 LRELKVCLLGETGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILI-GTKFDD 214
G R P+ + + A + ++D+T + ++ W E R+ I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAIAGNKCD- 121
Query: 215 FVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIF 256
D + A+ YA ++ A +SA + IN+N++F
Sbjct: 122 ----LSDAREVSEKDAKDYADSIHAIFVETSAKNAININEVF 159
>gi|348504740|ref|XP_003439919.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R I I L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 132 RAVPTD-------EARAFAEKNTLSFIETSALDSTNVEEAFKSILTEIYRI 175
>gi|307777892|dbj|BAJ21342.1| Rab-family small GTPase RabX27 [Tetrahymena thermophila]
Length = 181
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 9/166 (5%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ +LGD +GK+S + +++ N + + ++ NKT+ + + + WD G
Sbjct: 19 FKVLVLGDGGVGKSSLLDRFINNTFDAKYRATIAIDYKNKTIDLPKESVQLNFWDFSGHP 78
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFDDFVR 217
++ KDA AIL + D+T R +L+ + W EA + IP +++G K D VR
Sbjct: 79 EFYEVRNEFYKDANAILLVLDVTLRRSLDGLDMWLREAHEMGVQGIPTVVVGNKKDMSVR 138
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
+ A +AK + F SA+ ++++FKF+ KL
Sbjct: 139 AVSE------NDAYNWAKTRQFDYFEVSASQGTGLDELFKFLAEKL 178
>gi|296203112|ref|XP_002748751.1| PREDICTED: ras-related protein Rab-37 isoform 1 [Callithrix
jacchus]
Length = 223
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 102 KISLLGDCQIGKTSFVKYVGNEQERS---LQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ LLGD +GKT F+ + S + G++ NK + V G R+ IWD G
Sbjct: 31 KVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKLVTVDGMRVKLQIWDTAGQE 90
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD 213
R +DA A+L ++D+T++ + ++I W +E ++ Q + I L+G K D
Sbjct: 91 RFRSVTHAYYRDAQALLLLYDITNKASFDNIRAWLTEIHEYAQRDVVIMLLGNKAD 146
>gi|60302752|ref|NP_001012569.1| ras-related protein Rab-11B [Gallus gallus]
gi|224087229|ref|XP_002190133.1| PREDICTED: ras-related protein Rab-11B [Taeniopygia guttata]
gi|60098771|emb|CAH65216.1| hypothetical protein RCJMB04_8i9 [Gallus gallus]
Length = 218
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R I I L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|224138818|ref|XP_002322909.1| predicted protein [Populus trichocarpa]
gi|222867539|gb|EEF04670.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 86/200 (43%), Gaps = 16/200 (8%)
Query: 91 GYDTDSDLVSLKISLLGDCQIGKTS-FVKYVGNEQERSLQMAGLNLINKTLMVQGARIAF 149
G + S +S KI L+GD +GK+S V ++ + E G++ K L V G R+
Sbjct: 2 GSSSGSYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKL 61
Query: 150 SIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCT---LNSIVGWYSEARKWNQTAIPI 206
+IWD G R ++A I+ ++D+T R T L+ + G E NQ + +
Sbjct: 62 TIWDTAGQERFRTLTSSYYRNAQGIILVYDVTRRETFTNLSDVWGKEVELFSTNQDCVKM 121
Query: 207 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
L+G K D + + A AK SA NV + F+ + K+ +
Sbjct: 122 LVGNKVD-----KESGRDVTKDEGMALAKQHGCLFLECSAKTRENVEQCFEELALKIMEV 176
Query: 267 P-------WTVKRNLTIGEP 279
P VKRN+ +P
Sbjct: 177 PSLLEEGSTAVKRNILKQKP 196
>gi|224124790|ref|XP_002329949.1| predicted protein [Populus trichocarpa]
gi|222871971|gb|EEF09102.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 6/168 (3%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GD +GK++ + ++ NE S G+ +TL V G + IWD G
Sbjct: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTVKAQIWDTAGQE 72
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVRL 218
R + AV L ++D+T R T +++ W E R + I I++ D L
Sbjct: 73 RYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHL 132
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
L+ A A+ + +SA N+ K F+ I+ +++++
Sbjct: 133 RAVLE----EDGHALAEKEGLSFLETSALEATNIEKAFQTILTEIYHI 176
>gi|66821415|ref|XP_644189.1| GTP-binding nuclear protein Ran [Dictyostelium discoideum AX4]
gi|60472411|gb|EAL70364.1| GTP-binding nuclear protein Ran [Dictyostelium discoideum AX4]
Length = 754
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 101 LKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
+K+ L+GD +GKT+F+K +G Q+ + G+ L N L + F IWD GD
Sbjct: 53 IKLILVGDSGVGKTTFLKRHIIGEFQKSHIPTVGVELSNLILYTNIGNVNFDIWDTCGDE 112
Query: 159 R--SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKFD 213
+ F H+ I MFD++SR + ++ W++E K IP IL+G K D
Sbjct: 113 KFEVFRHLYYVGSQCAII--MFDVSSRVSYRNVPSWFNELTKELGNNIPIILVGNKVD 168
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 13/121 (10%)
Query: 101 LKISLLGDCQIGKTSFVK--YVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
+K+ L+GD +GK++++ G + + + G ++ + FSIWD+
Sbjct: 513 IKLVLIGDGGVGKSTYINRLLTGEFETQYVATFGCSVHKFNFKTTIGDVNFSIWDM---- 568
Query: 159 RSFDHVPIACKD-----AVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIP-ILIGTKF 212
+F +P A +D A + MFD+ SR + S+ W++E + +P +L+G K
Sbjct: 569 -AFTRLPGAMRDDYMTGAECAIIMFDVCSRESYRSVNDWFNELLRITGKVVPMVLVGNKV 627
Query: 213 D 213
+
Sbjct: 628 E 628
>gi|327274891|ref|XP_003222209.1| PREDICTED: ras-related protein Rab-5A-like isoform 1 [Anolis
carolinensis]
gi|327274893|ref|XP_003222210.1| PREDICTED: ras-related protein Rab-5A-like isoform 2 [Anolis
carolinensis]
Length = 215
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 9/195 (4%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGARI 147
+G + + + K+ LLG+ +GK+S V ++V G E G + +T+ + +
Sbjct: 10 NGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTV 69
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 206
F IWD G R P+ + A A + ++D+T+ + W E ++ I I
Sbjct: 70 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIA 129
Query: 207 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL-FN 265
L G K D + D Q A++YA +SA ++NVN+IF I KL N
Sbjct: 130 LAGNKADLANKRAVDFQ-----DAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKN 184
Query: 266 LPWTVKRNLTIGEPI 280
P N G +
Sbjct: 185 EPQNTGANSVRGRGV 199
>gi|330799964|ref|XP_003288010.1| hypothetical protein DICPUDRAFT_78832 [Dictyostelium purpureum]
gi|325081969|gb|EGC35467.1| hypothetical protein DICPUDRAFT_78832 [Dictyostelium purpureum]
Length = 210
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 87/162 (53%), Gaps = 11/162 (6%)
Query: 101 LKISLLGDCQIGKTS-FVKYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVG-GD 157
K+ L+G+ ++GKTS +KYV E E + G++ K + + + F +WD G
Sbjct: 15 FKVLLVGNFKVGKTSILLKYVDGEFTENYIATIGIDFKVKNIEIDNESLKFILWDHPRGC 74
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVG-WYSEARKW--NQTAIP--ILIGTKF 212
R ++ I+F++D+T + + +SI WY E +K+ ++ IP +++GTK
Sbjct: 75 DRLRTITSAYYRNLNGIIFVYDITDKKSFSSIQSIWYPECKKYSPDKAYIPSILILGTKS 134
Query: 213 DDFVRLPPDLQWTIAT-QARAYAKAMKATLFFSSATHNINVN 253
D +R + + + T QAR YA ++KA F S+ N+N++
Sbjct: 135 D--LRNQSNYKECVDTDQAREYAASIKALFFEVSSKENLNLD 174
>gi|255556838|ref|XP_002519452.1| protein with unknown function [Ricinus communis]
gi|223541315|gb|EEF42866.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 11/182 (6%)
Query: 99 VSLKISLLGDCQIGKTS-FVKYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGD 157
+S KI L+GD +GK+S V ++ + E G++ K L V G R+ +IWD G
Sbjct: 15 LSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVDGKRLKLTIWDTAGQ 74
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVG-WYSEARKW--NQTAIPILIGTKFDD 214
R ++A I+ ++D+T R T ++ W E + N+ + +L+G K D
Sbjct: 75 ERFRTLTSSYYRNAQGIILVYDVTRRETFTNLSDVWAKEVDLYCTNKDCVKMLVGNKLD- 133
Query: 215 FVRLPPDLQWTIA-TQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVKRN 273
D + ++ + A AK SA NV K F+ + K+ +P ++
Sbjct: 134 -----IDSERAVSREEGMALAKEHGCAFLECSAKTRENVEKCFEELALKIMEVPSLLEEG 188
Query: 274 LT 275
T
Sbjct: 189 ST 190
>gi|187607443|ref|NP_001120303.1| uncharacterized protein LOC100145363 [Xenopus (Silurana)
tropicalis]
gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio]
gi|169642085|gb|AAI60799.1| LOC100145363 protein [Xenopus (Silurana) tropicalis]
Length = 218
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R I I L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|410921188|ref|XP_003974065.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R I I L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 132 RAVPTD-------EARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|340379533|ref|XP_003388281.1| PREDICTED: ras-related protein Rab-30-like [Amphimedon
queenslandica]
Length = 212
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 101 LKISLLGDCQIGKTSFVKYV--GNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
KI L+GD +GKTS V+ G + G++ KTL V G+ I IWD G
Sbjct: 9 FKIVLIGDAGVGKTSIVRRYTDGVFTSAGIPTIGVDFCIKTLSVNGSAIKLQIWDTAGQE 68
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAI-PILIGTKFDDFVR 217
R + A AI+ ++D+ S T ++ W SE ++ T + ILIG K D R
Sbjct: 69 RFRTITQSYYRSADAIVLVYDIGSATTFRNLPEWLSEVDRYAGTTVHKILIGNKSD---R 125
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
++Q + +Q +A+ +SA N++ +F+ + L
Sbjct: 126 TDREIQTHLGSQ---FAQENDMPFLETSAKSADNIDNLFEQLAKTL 168
>gi|308510398|ref|XP_003117382.1| CRE-RAB-21 protein [Caenorhabditis remanei]
gi|308242296|gb|EFO86248.1| CRE-RAB-21 protein [Caenorhabditis remanei]
Length = 210
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 8/168 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ LLG+ +GK+S V ++V N+ R L + +KT+ + + IWD G
Sbjct: 13 FKVVLLGEGCVGKSSLVLRFVENKFSSRHLSTIQASFQSKTVHIDDCKAELHIWDTAGQE 72
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKFDDFVR 217
+ PI + + +L +FD+T R + + W E + +TA +++G K D
Sbjct: 73 KYHALGPIYYRGSNGVLLVFDITDRRSFEKVKNWVLEIKTCLGKTAEILIVGNKID---- 128
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
D + A YA+ A +SA N+ ++ F+ + +K+ +
Sbjct: 129 -LEDERQVSRQDAEVYAETEGALYMETSAQENMGISDAFEALTSKMID 175
>gi|355714965|gb|AES05179.1| RAB5C, member RAS oncoprotein family [Mustela putorius furo]
Length = 215
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 8/177 (4%)
Query: 90 SGYDTDSDLVSLKISLLGDCQIGKTSFV-KYV-GNEQERSLQMAGLNLINKTLMVQGARI 147
+G + + K+ LLG+ +GK+S V ++V G E G + +T+ + +
Sbjct: 43 NGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTV 102
Query: 148 AFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI- 206
F IWD G R P+ + A A + ++D+T+ T W E ++ I I
Sbjct: 103 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIA 162
Query: 207 LIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
L G K D + + Q +A+AYA +SA +NVN+IF I KL
Sbjct: 163 LAGNKADLASKRAVEFQ-----EAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 214
>gi|170596273|ref|XP_001902705.1| Ras-related protein Rab-11B [Brugia malayi]
gi|312076250|ref|XP_003140777.1| rab family protein [Loa loa]
gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putative [Brugia malayi]
gi|307764062|gb|EFO23296.1| Ras-like protein Rab-11B [Loa loa]
gi|402584459|gb|EJW78400.1| rab family protein [Wuchereria bancrofti]
Length = 215
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ +++ V+G + IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFD--DF 215
R + AV L ++D+ T ++ W E R +Q + +L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLF 264
+P D +A+AYA+ + + +SA + NV F I+ +++
Sbjct: 132 RAVPTD-------EAKAYAEKNQLSFIETSALDSTNVEAAFTNILTEIY 173
>gi|395511731|ref|XP_003760106.1| PREDICTED: ras-related protein Rab-31 [Sarcophilus harrisii]
Length = 195
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 79/162 (48%), Gaps = 6/162 (3%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGD 157
LK+ LLGD +GK+S V ++V + + ++ G + + KT+ F IWD G
Sbjct: 6 ELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQ 65
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVR 217
R P+ + + A + ++D+T + + N++ W E ++ I + I D
Sbjct: 66 ERFHSLAPMYYRGSAAAVIVYDITKQDSFNTLKKWVKELKEHGPENIVMAIAGNKCDL-- 123
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 259
D++ A+ YA+++ A + +SA IN+ ++F+ I
Sbjct: 124 --SDIREVPMKDAKEYAESIGAVVVETSAKCAINIEELFQGI 163
>gi|56967688|gb|AAW31993.1| CG2885 [Drosophila melanogaster]
Length = 195
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 8/168 (4%)
Query: 101 LKISLLGDCQIGKTSFVKYVGNEQ--ERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ +LGD +GK+ + +++ E+ L+ G+++ +++ + + +WD GD
Sbjct: 8 FKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDK 67
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFDDFVR 217
R +P + A IL ++D+TS + +I GW E R+ I +L+G K DD
Sbjct: 68 RFNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVIVLLVGNKSDD--- 124
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
P+ + Q YA SA +NV IF + +++
Sbjct: 125 --PNHRQVSMEQGFNYAHRRALGFEEVSAKSGMNVYDIFSSLAMDIYH 170
>gi|348551270|ref|XP_003461453.1| PREDICTED: ras-related protein Rab-11B-like [Cavia porcellus]
Length = 278
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 12/170 (7%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
K+ L+GD +GK++ + ++ NE S G+ +++ V G I IWD G R
Sbjct: 73 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 132
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DFV 216
+ AV L ++D+ T ++ W E R + I I L+G K D
Sbjct: 133 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 192
Query: 217 RLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 193 AVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 235
>gi|224126375|ref|XP_002329538.1| predicted protein [Populus trichocarpa]
gi|222870247|gb|EEF07378.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 96 SDLVSLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWD 153
S L K+ LGD +GKTS + +++ ++ + + Q G++ ++KT+ ++ I +WD
Sbjct: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 64
Query: 154 VGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEAR-KWNQTAIPILIGTKF 212
G R +P +D+ + +FD+ SR + + W E R + I +L+G K
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKT 124
Query: 213 DDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKL 263
D L Q +I + A A+ + +SA N+ +F+ I A L
Sbjct: 125 D----LVEKRQVSI-EEGEAKARELNVMFIETSAKAGFNIKPLFRKIAAAL 170
>gi|146162031|ref|XP_001008484.2| Ras family protein [Tetrahymena thermophila]
gi|1172841|sp|P41915.1|RAN_TETTH RecName: Full=GTP-binding nuclear protein Ran; AltName: Full=GTPase
Ran; AltName: Full=Ras-like protein TC4
gi|559386|dbj|BAA04600.1| Ran/TC4 [Tetrahymena thermophila]
gi|146146630|gb|EAR88239.2| Ras family protein [Tetrahymena thermophila SB210]
Length = 225
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 76/174 (43%), Gaps = 13/174 (7%)
Query: 98 LVSLKISLLGDCQIGKTSFV--KYVGNEQERSLQMAGLNLINKTLMVQGARIAFSIWDVG 155
+ K+ L+GD +GKT+FV G ++R + G+N+ N L I F+IWD
Sbjct: 9 VAEFKLVLVGDGGVGKTTFVTRHQTGEFEKRYIATQGVNVSNMVLYTTKGPIRFNIWDTA 68
Query: 156 GDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDF 215
G + A A + MFD+TSR T +I W+ + + + +L+G K D
Sbjct: 69 GQEKLGGLREGYYIGANAAIMMFDVTSRITYKNIPKWHKDLTRICENIPIVLVGNKVDSK 128
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFS--SATHNINVNKIFKFIMAKLFNLP 267
R +AR K +L + SA N K F +I+ KL P
Sbjct: 129 DR---------KVKARQITFHRKRSLQYYDVSAKSNYQYEKPFLWILRKLTGDP 173
>gi|7689359|gb|AAF67746.1|AF254800_1 GTP-binding protein Rab0 [Rattus norvegicus]
Length = 194
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 81/162 (50%), Gaps = 6/162 (3%)
Query: 100 SLKISLLGDCQIGKTSFV-KYVGNEQERSLQMA-GLNLINKTLMVQGARIAFSIWDVGGD 157
LK+ LLGD +GK+S V ++V + + ++ G + + KT+ F IWD G
Sbjct: 5 ELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQ 64
Query: 158 SRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPILIGTKFDDFVR 217
R P+ + + A + ++D+T + + +++ W E +++ I + I D
Sbjct: 65 ERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEYGPENIVMAIAGNKCDL-- 122
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFI 259
D++ A+ YA+++ A + +SA + IN+ ++F+ I
Sbjct: 123 --SDIREVPLKDAKEYAESIGALVVETSAKNAINIEELFQGI 162
>gi|50543172|ref|XP_499752.1| YALI0A04367p [Yarrowia lipolytica]
gi|54042069|sp|P41925.2|RYL2_YARLI RecName: Full=Ras-like GTP-binding protein RYL2
gi|49645617|emb|CAG83676.1| YALI0A04367p [Yarrowia lipolytica CLIB122]
Length = 209
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 7/170 (4%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
KI LLG +GKT FV +YV N+ Q G + K ++V + IWD G R
Sbjct: 7 KIVLLGAQGVGKTCFVTRYVNNKFQAGQASTIGASFSRKRVVVNDTTVRLQIWDTAGQER 66
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFDDFVRL 218
PI + A + +D+TSR + +++ W E ++ + I I ++GTK D V+
Sbjct: 67 FRSMAPIYYRSASCGILCYDVTSRASFDAMHLWLLELKQNLSSDIIIHIVGTKV-DLVKD 125
Query: 219 PPDLQWTIATQARAYAKAM---KATLFFSSATHNINVNKIFKFIMAKLFN 265
P L+ Q YA + SA + V ++F+ I+ KL +
Sbjct: 126 EPSLREVPFEQCVEYASEWLQDDSCCHEISAKDDEGVEEVFEVIITKLLD 175
>gi|405952895|gb|EKC20651.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 234
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 8/167 (4%)
Query: 102 KISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDSR 159
K+ L GD +GKT+ + ++ NE S G+ +++ + G + IWD G R
Sbjct: 33 KVVLTGDSGVGKTNLLSRFTRNEFSLESRSTIGVEFATRSVHIDGKTLKAQIWDTAGQDR 92
Query: 160 SFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFDDFVRL 218
+ AV ++F++D+ R T +++ W EAR + + I +L+G K D
Sbjct: 93 YRAITNAYYRKAVGVIFVYDIAKRPTFDNLDKWLKEARNFTDDDVILMLVGNKTD----- 147
Query: 219 PPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFN 265
L+ + +AR+YA+ + +SA +V+ F+ I+ ++++
Sbjct: 148 LRHLRAVSSQEARSYAEKNNMSYIETSALDCTHVDLAFQSILKEIYS 194
>gi|323333722|gb|EGA75114.1| Sec4p [Saccharomyces cerevisiae AWRI796]
Length = 186
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 12/181 (6%)
Query: 79 AGLVELSRTFSSGYDTDSDLVSLKISLLGDCQIGKTSF-VKYVGNEQERS-LQMAGLNLI 136
+GL +S + +G DS +KI L+GD +GK+ V++V ++ S + G++
Sbjct: 2 SGLRTVSASSGNGKSYDS---IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFK 58
Query: 137 NKTLMVQGARIAFSIWDVGGDSRSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEA 196
KT+ + G ++ +WD G R + A+ I+ ++D+T T +I W+
Sbjct: 59 IKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTV 118
Query: 197 RKW-NQTAIPILIGTKFDDFVRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKI 255
+ N A +L+G K D R+ A Q A AK + SSA ++ NVN+
Sbjct: 119 NEHANDEAQLLLVGNKSDMETRV------VTADQGEALAKELGIPFIESSAKNDDNVNEY 172
Query: 256 F 256
F
Sbjct: 173 F 173
>gi|351726222|ref|NP_001237375.1| uncharacterized protein LOC100527786 [Glycine max]
gi|255633206|gb|ACU16959.1| unknown [Glycine max]
Length = 223
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 16/184 (8%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK+ + ++ NE S G+ +TL++Q + IWD G
Sbjct: 18 FKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQE 77
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKW-NQTAIPILIGTKFDDFVR 217
R + AV + ++D+T R + + I W E R ++ + ILIG K D
Sbjct: 78 RYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRNHADKNIVIILIGNKSD---- 133
Query: 218 LPPDLQWTIATQ-ARAYAKAMKATLFF--SSATHNINVNKIFKFIMAKLFNLPWTVKRNL 274
+ Q + T+ A+ +A+ K LFF +SA NV F ++ ++FN+ K+NL
Sbjct: 134 --LENQRQVPTEDAKEFAE--KEGLFFLETSALEATNVETAFMTVLTEIFNI--VNKKNL 187
Query: 275 TIGE 278
G+
Sbjct: 188 AAGD 191
>gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus]
Length = 218
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 12/171 (7%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ L+GD +GK++ + ++ NE S G+ ++ V G I IWD G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATHSIQVDGKTIKAQIWDTAGQE 71
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARKWNQTAIPI-LIGTKFD--DF 215
R + AV L ++D+ T ++ W E R + I I L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 216 VRLPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNL 266
+P D +ARA+A+ + +SA + NV + FK I+ +++ +
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|268532416|ref|XP_002631336.1| C. briggsae CBR-RAB-21 protein [Caenorhabditis briggsae]
Length = 206
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 8/173 (4%)
Query: 101 LKISLLGDCQIGKTSFV-KYVGNE-QERSLQMAGLNLINKTLMVQGARIAFSIWDVGGDS 158
K+ LLG+ +GK+S V ++V N+ R L + NKT+ V + IWD G
Sbjct: 11 FKVVLLGEGCVGKSSLVLRFVENKFSTRHLSTIQASFQNKTVQVDDCKAELHIWDTAGQE 70
Query: 159 RSFDHVPIACKDAVAILFMFDLTSRCTLNSIVGWYSEARK-WNQTAIPILIGTKFDDFVR 217
+ PI + + +L +FD+T + + + W E + +TA +++G K D
Sbjct: 71 KYHALGPIYYRGSNGVLLVFDITEQRSFKKVKNWVLEIKTCLGKTAEILIVGNKID---- 126
Query: 218 LPPDLQWTIATQARAYAKAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTV 270
D + +A +YA++ A +SA N +++ F + K+ T
Sbjct: 127 -LDDERQVSRQEAESYAESEGALYMETSAQENRGISEAFTALTEKMIQHSRTA 178
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.136 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,048,888,720
Number of Sequences: 23463169
Number of extensions: 152562629
Number of successful extensions: 436683
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1967
Number of HSP's successfully gapped in prelim test: 8932
Number of HSP's that attempted gapping in prelim test: 427444
Number of HSP's gapped (non-prelim): 11074
length of query: 283
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 142
effective length of database: 9,050,888,538
effective search space: 1285226172396
effective search space used: 1285226172396
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 76 (33.9 bits)