Citrus Sinensis ID: 023336

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280---
Protein Sequence
MAATAGSIFAASSQFASATRSVSCRNATPSVSSTLGSSFKGASLPRSSPKQKKTVRITGKVTAAVTTATNPYEEIEEYTRPSWAMFELGKAPVYWKTMNGLPPMSGEKLKIFYNPYAKKLLPNEDFGIGFNGGFNQPFMCGGEPRAMLRKNRGQNDSPFYTIQICVPKHAINLIFSFTNGVEWDGPYRIKFLVPRAWRNKPMDFFNKGLADQLSKDGACEKAIFPDTDVVVDRCVLIGNLAAEGGDRCDLNLVPGCMDPSSPLYDPLANVDDGSCPLDSDIED
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccEEEEEEEEEcccccccccccccccHHHccccccEEEEEcccccccccccEEEEEcccccccccccccEEEEcccccccccccccHHHHHHHHHcccccccEEEEEEEcccEEEEEEEccccccccccEEEEEEcccccccccHHHHHHHHHHHHHccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHccccccccEEEccccccccccccccccccccccccccccccEEEEEEccEEEEEEEEEcccHHHHHHcccccHHHEEcccccEEEEccccccccccccEEEEEcccHHccccccHcEEEEcccccccccccccHHHHHHHHcccccccEEEEEEEccccEEEEEEEEcccccccccEEEEEEccHHHccccHHHHHHHHHHHHHHccccHHcEcccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MAATAGSIFAASSQFasatrsvscrnatpsvsstlgssfkgaslprsspkqkktvRITGKVTAAVttatnpyeeieeytrpswamfelgkapvywktmnglppmsgeklkifynpyakkllpnedfgigfnggfnqpfmcggepramlrknrgqndspfytiqicvPKHAINLIFSFtngvewdgpyrikflvprawrnkpmdffnkGLADqlskdgacekaifpdtdvVVDRCVLIGNlaaeggdrcdlnlvpgcmdpssplydplanvddgscpldsdied
Flexible Loop (DISEMBL)
MAATAGSIFAASSQFASATRSVSCRNAtpsvsstlgssfkgaslprsspkqkktvritgkvtaavttatnpyeeieeytrpswaMFELGKAPVYWKTMNGLPPMSGEKLKIFYNPYAKKLLPNEDFGIGFNGGFNQPFMCGGEPRAMLRKNRGQNDSPFYTIQICVPKHAINLIFSFtngvewdgpyRIKFLVPRAWRNKPMDFFNKGLADQLSKDGACEKAIFPDTDVVVDRCVLIGNLAaeggdrcdlnLVPGCMDPSSPLYDPLANVDDGSCPLDSDIED
Low Complexity Region (SEG)
MAATagsifaassqfasatrsVSCRNATPSVSSTLGSSFKGASLPRSSPKQKKTVRITGKvtaavttatNPYEEIEEYTRPSWAMFELGKAPVYWKTMNGLPPMSGEKLKIFYNPYAKKLLPNEDFGIGFNGGFNQPFMCGGEPRAMLRKNRGQNDSPFYTIQICVPKHAINLIFSFTNGVEWDGPYRIKFLVPRAWRNKPMDFFNKGLADQLSKDGACEKAIFPDTDVVVDRCVLIGNLAAEGGDRCDLNLVPGCMDPSSPLYDPLANVDDGSCPLDSDIED
Disordered region (IsUnstruct)
*******************************************************RITGKVTAAVTTATNPYEEIEEYTRPSWAMFELGKAPVYWKTMNGLPPMSGEKLKIFYNPYAKKLLPNEDFGIGFNGGFNQPFMCGGEPR***********SPFYTIQICVPKHAINLIFSFTNGVEWDGPYRIKFLVPRAWRNKPMDFFNKGLADQLSKDGACEKAIFPDTDVVVDRCVLIGNLAAEGGDRCDLNLVPGCMD*************************
Disordered Region (DISOPRED)
**********ASSQF**************SVSSTLGSSFKGASLP*********VRITGKVTAAVTTATNPYEEIEEYTRPSWAMFELGKAPVYWKTMNGLPPMSGEKLKIFYNPYAKKLLPNEDFGIGFNGGFNQPFMCGGEP*********QNDSPFYTIQICVPKHAINLIFSFTNGVEWDGPYRIKFLVPRAWRNKPMDFFNKGLADQLSKDGACEKAIFPDTDVVVDRCVLIGNLAAEGGDRCDLNLVPGCMDPSSPLYDPLANVDDGSC*L******
Disordered Region (DISEMBL)
*********************************************************TGKVTAAVTTATNPYEEIEEYTRPSWAMFELGKAPVYWKTMNGLPPMSGEKLKIFYNPYAKKLLPNEDFGIGFNGGFNQPFMCGGEPRAMLRKNRGQNDSPFYTIQICVPKHAINLIFSFTNGVEWDGPYRIKFLVPRAWRNKPMDFFNKGLADQLSKDGACEKAIFPDTDVVVDRCVLIGNLAAEGGDRCDLNLVPGCMDPSSPLYDPLANVDDGSCPLDSDIED
Disordered Region (DISPRO)
**************FASATRSVSCRNATPSVSSTLGSSFKGASLPRSSPKQKKTVRITGKVTAAVTTATNPYEEIEEYTRPSWAMFELGKAPVYWKTMNGLPPMSGEKLKIFYNPYAKKLLPNEDFGIGFNGGFNQPFMCGGEPRAMLRKNRGQNDSPFYTIQICVPKHAINLIFSFTNGVEWDGPYRIKFLVPRAWRNKPMDFFNKGLADQLSKDGACEKAIFPDTDVVVDRCVLIGNLAAEGGDRCDLNLVPGCMDPSSPLYDPLANVDDGSCPL******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAATAGSIFAASSQFASATRSVSCRNATPSVSSTLGSSFKGASLPRSSPKQKKTVRITGKVTAAVTTATNPYEEIEEYTRPSWAMFELGKAPVYWKTMNGLPPMSGEKLKIFYNPYAKKLLPNEDFGIGFNGGFNQPFMCGGEPRAMLRKNRGQNDSPFYTIQICVPKHAINLIFSFTNGVEWDGPYRIKFLVPRAWRNKPMDFFNKGLADQLSKDGACEKAIFPDTDVVVDRCVLIGNLAAEGGDRCDLNLVPGCMDPSSPLYDPLANVDDGSCPLDSDIED
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	283
225442943	282	PREDICTED: uncharacterized protein LOC10	0.996	1.0	0.710	1e-119
255553199	279	conserved hypothetical protein [Ricinus	0.978	0.992	0.687	1e-114
224054336	286	predicted protein [Populus trichocarpa]	0.989	0.979	0.677	1e-111
114149950	277	chloroplast post-illumination chlorophyl	0.964	0.985	0.656	1e-109
357468177	280	hypothetical protein MTR_4g010140 [Medic	0.964	0.975	0.663	1e-108
359807532	277	uncharacterized protein LOC100790141 [Gl	0.968	0.989	0.645	1e-105
449436138	284	PREDICTED: uncharacterized protein LOC10	0.989	0.985	0.641	1e-104
449509289	284	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.989	0.985	0.641	1e-104
388501902	276	unknown [Lotus japonicus]	0.954	0.978	0.640	1e-100
356519306	272	PREDICTED: uncharacterized protein LOC10	0.961	1.0	0.635	1e-99

>gi|225442943|ref|XP_002266165.1| PREDICTED: uncharacterized protein LOC100264489 isoform 1 [Vitis vinifera] gi|225442945|ref|XP_002266207.1| PREDICTED: uncharacterized protein LOC100264489 isoform 2 [Vitis vinifera] gi|297743467|emb|CBI36334.3| unnamed protein product [Vitis vinifera]

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 201/283 (71%), Positives = 236/283 (83%), Gaps = 1/283 (0%)

Query: 1   MAATAGSIFAASSQFASATRSVSCRNATPSVSSTLGSSFKGASLPRSSPKQKKTVRITGK 60
           MAAT GSIFA+S+Q      SVS  N +PSV+  L S+F GASL    PK  K V++TGK
Sbjct: 1   MAATTGSIFASSTQRFPTVTSVSGTNGSPSVAGRLASNFMGASLRSRLPKMGKVVKVTGK 60

Query: 61  VTAAVTTATNPYEEIEEYTRPSWAMFELGKAPVYWKTMNGLPPMSGEKLKIFYNPYAKKL 120
           V+AA   AT P EE +E   PSWAMFELG+APVYWKTMNGLPP SGEKLK+FYNP A KL
Sbjct: 61  VSAAAV-ATTPVEETKEVKLPSWAMFELGRAPVYWKTMNGLPPSSGEKLKLFYNPVASKL 119

Query: 121 LPNEDFGIGFNGGFNQPFMCGGEPRAMLRKNRGQNDSPFYTIQICVPKHAINLIFSFTNG 180
           +PNEDFGIGFNGGFNQP MCGGEPRAML+K RG+ D P YTIQIC+PKHA+NLIFSFTNG
Sbjct: 120 VPNEDFGIGFNGGFNQPIMCGGEPRAMLKKARGKADRPIYTIQICIPKHAVNLIFSFTNG 179

Query: 181 VEWDGPYRIKFLVPRAWRNKPMDFFNKGLADQLSKDGACEKAIFPDTDVVVDRCVLIGNL 240
            EWDGPY+++F VP+AWRNKP++FFN+GLA++LSK+GAC+KAIFPDT++V+DRC LIGNL
Sbjct: 180 TEWDGPYKLQFQVPKAWRNKPIEFFNQGLAEELSKEGACDKAIFPDTNIVIDRCALIGNL 239

Query: 241 AAEGGDRCDLNLVPGCMDPSSPLYDPLANVDDGSCPLDSDIED 283
             EGGDRC+L+ V GC DPSSPLY+PLANVDDGSCP++SD ED
Sbjct: 240 TLEGGDRCNLDFVIGCTDPSSPLYNPLANVDDGSCPIESDSED 282

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553199|ref|XP_002517642.1| conserved hypothetical protein [Ricinus communis] gi|223543274|gb|EEF44806.1| conserved hypothetical protein [Ricinus communis]

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 194/282 (68%), Positives = 240/282 (85%), Gaps = 5/282 (1%)

Query: 2   AATAGSIFAASSQFASATRSVSCRNATPSVSSTLGSSFKGASLPRSSPKQKKTVRITGKV 61
           A+T+ S+F  ++Q  SATR +    A PSVS++LG++F GASL  SS K+ +TV+I+ +V
Sbjct: 3   ASTSASLFKLATQPYSATRLIP---ANPSVSNSLGTNFIGASLQVSSSKKNRTVKISRRV 59

Query: 62  TAAVTTATNPYEEIEEYTRPSWAMFELGKAPVYWKTMNGLPPMSGEKLKIFYNPYAKKLL 121
           TAAV  A  P EEI EY  PSWAMFELG+APVYWKTMNGLPP SGEKLK+FYNP AKKL 
Sbjct: 60  TAAVVVAPTPSEEITEYALPSWAMFELGRAPVYWKTMNGLPPASGEKLKLFYNPAAKKLN 119

Query: 122 PNEDFGIGFNGGFNQPFMCGGEPRAMLRKNRGQNDSPFYTIQICVPKHAINLIFSFTNGV 181
           PN++FGIGFNGGFNQP MCGGEPRAML+K RG+ D P YTIQICVPKHA+NLIFSFTNGV
Sbjct: 120 PNKEFGIGFNGGFNQPIMCGGEPRAMLKKTRGKADPPIYTIQICVPKHAVNLIFSFTNGV 179

Query: 182 EWDGPYRIKFLVPRAWRNKPMDFFNKGLADQLSKDGACEKAIFPDTDVVVDRCVLIGNLA 241
           EWDGPYR++F VP+ W+N+P++FFN+GLA++LSK+GAC++AIFPDT++V+DRC +IGNL+
Sbjct: 180 EWDGPYRLQFQVPKGWQNRPIEFFNEGLAEELSKEGACDRAIFPDTNIVIDRCAMIGNLS 239

Query: 242 AEGGDRCDLNLVPGCMDPSSPLYDPLANVDDGSCPLDSDIED 283
            EGGDRC+L+LVPGCMD +S LY+PLANVDDGSC +  D+ED
Sbjct: 240 IEGGDRCNLDLVPGCMDTASHLYNPLANVDDGSCAI--DLED 279

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054336|ref|XP_002298209.1| predicted protein [Populus trichocarpa] gi|222845467|gb|EEE83014.1| predicted protein [Populus trichocarpa]

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 193/285 (67%), Positives = 230/285 (80%), Gaps = 5/285 (1%)

Query: 1   MAATAGSIFAASSQ---FASATRSVSCRNATPSVSSTLGSSFKGASLPRSSPKQKKTVRI 57
           MAAT  SIF  S+Q   F     + +  NA PSVS+TL SSF G+SL RS+ K+K+ V+I
Sbjct: 1   MAATGASIFQISTQPRVFTRPITTANINNANPSVSNTLASSFIGSSLQRSTTKKKRAVKI 60

Query: 58  TGKVTAAVTTATN--PYEEIEEYTRPSWAMFELGKAPVYWKTMNGLPPMSGEKLKIFYNP 115
             KV AA          EE++EY RP+WAMFELG APV+WKTMNGLPP SGE LK+FYNP
Sbjct: 61  GRKVIAAAAVTVATPSREEVKEYARPTWAMFELGSAPVFWKTMNGLPPSSGENLKLFYNP 120

Query: 116 YAKKLLPNEDFGIGFNGGFNQPFMCGGEPRAMLRKNRGQNDSPFYTIQICVPKHAINLIF 175
            A KL+PNE+FGI FNGGFNQP MCGGEPRAMLRK RG+ D PFYTIQICVPKHA+NLIF
Sbjct: 121 AANKLVPNEEFGIAFNGGFNQPIMCGGEPRAMLRKVRGKADPPFYTIQICVPKHAVNLIF 180

Query: 176 SFTNGVEWDGPYRIKFLVPRAWRNKPMDFFNKGLADQLSKDGACEKAIFPDTDVVVDRCV 235
           SFTNGV+WDGPYR++F V   WRNKP++FFN+GLA++LSK+GACEKAIFPDTD++V RC 
Sbjct: 181 SFTNGVDWDGPYRLQFQVHNGWRNKPIEFFNEGLAEELSKEGACEKAIFPDTDIIVTRCA 240

Query: 236 LIGNLAAEGGDRCDLNLVPGCMDPSSPLYDPLANVDDGSCPLDSD 280
           +IGNL+ EGGDRCDL+LV GCMDPSS LY+PLANVDDG+CP++ +
Sbjct: 241 MIGNLSIEGGDRCDLDLVSGCMDPSSHLYNPLANVDDGTCPIEME 285

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|114149950|gb|ABI51594.1| chloroplast post-illumination chlorophyll fluorescence increase protein [Nicotiana tabacum]

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 180/274 (65%), Positives = 223/274 (81%), Gaps = 1/274 (0%)

Query: 10  AASSQFASATRSVSCRNATPSVSSTLGSSFKGASLPRSSPKQKKTVRITGKVTAAVTTAT 69
           + ++   SATRS S  NATP+VS+   +SF GA L R  P  +K VRI G + AA   AT
Sbjct: 5   STNTSLFSATRSASNSNATPTVSNVYATSFMGAHLRRCYPATRKLVRINGGIVAAAV-AT 63

Query: 70  NPYEEIEEYTRPSWAMFELGKAPVYWKTMNGLPPMSGEKLKIFYNPYAKKLLPNEDFGIG 129
           +P EE++EY+ P+WA F+LG+APVYWKTMNGLPP +GE+LK+FYNP A  ++PNEDFGI 
Sbjct: 64  SPAEEVKEYSLPTWAKFDLGRAPVYWKTMNGLPPTAGERLKLFYNPAANNMVPNEDFGIA 123

Query: 130 FNGGFNQPFMCGGEPRAMLRKNRGQNDSPFYTIQICVPKHAINLIFSFTNGVEWDGPYRI 189
           FNGGFNQP MCGGEPRAML K RG+ D P YTIQIC+PKHA++LIFSFTNG EWDGPYR+
Sbjct: 124 FNGGFNQPIMCGGEPRAMLMKTRGKADPPIYTIQICIPKHALSLIFSFTNGTEWDGPYRL 183

Query: 190 KFLVPRAWRNKPMDFFNKGLADQLSKDGACEKAIFPDTDVVVDRCVLIGNLAAEGGDRCD 249
           +F VP AWRNKP +FF +GLA +LS++GAC+KAIFPDT++V+ RC ++GNL+ EGGDRCD
Sbjct: 184 QFQVPNAWRNKPTEFFTEGLAGELSQEGACDKAIFPDTNIVITRCAMVGNLSVEGGDRCD 243

Query: 250 LNLVPGCMDPSSPLYDPLANVDDGSCPLDSDIED 283
           L++VPGC+DPSSP ++PLANVDDGSCP  SD ED
Sbjct: 244 LDIVPGCIDPSSPYFNPLANVDDGSCPPYSDAED 277

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357468177|ref|XP_003604373.1| hypothetical protein MTR_4g010140 [Medicago truncatula] gi|217073576|gb|ACJ85148.1| unknown [Medicago truncatula] gi|355505428|gb|AES86570.1| hypothetical protein MTR_4g010140 [Medicago truncatula] gi|388504280|gb|AFK40206.1| unknown [Medicago truncatula]

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 187/282 (66%), Positives = 231/282 (81%), Gaps = 9/282 (3%)

Query: 1   MAATAGSIFAASSQ--FASATRSVSCRNATPSVSSTLGSSFKGASLPRSSPKQKKTVRIT 58
           MAAT  SIFA+S+Q  F+  TRS        S+++T GS+F   SLPR  P +++ V++ 
Sbjct: 1   MAATNASIFASSTQPCFSVTTRS-------HSITNTFGSNFLNVSLPRCYPMKERHVKVR 53

Query: 59  GKVTAAVTTATNPYEEIEEYTRPSWAMFELGKAPVYWKTMNGLPPMSGEKLKIFYNPYAK 118
             V AA   AT+P EEI+EY  PSWAMFELGKA VYWKT NG+ P SGEKLK+FYNP A 
Sbjct: 54  HVVNAAAAVATSPTEEIQEYKLPSWAMFELGKAAVYWKTTNGVAPTSGEKLKLFYNPAAA 113

Query: 119 KLLPNEDFGIGFNGGFNQPFMCGGEPRAMLRKNRGQNDSPFYTIQICVPKHAINLIFSFT 178
           +L PNE+FGI FNGGFNQP MCGGEPRAMLRK+RG+ DSP Y+IQICVPKHA+NLIFSFT
Sbjct: 114 QLAPNEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADSPIYSIQICVPKHALNLIFSFT 173

Query: 179 NGVEWDGPYRIKFLVPRAWRNKPMDFFNKGLADQLSKDGACEKAIFPDTDVVVDRCVLIG 238
           NGV+WDGPYR++F VP+  +NKP++FFN+GLA++LSK+GACE+AIFPDT  V+++C +IG
Sbjct: 174 NGVDWDGPYRLQFQVPKPLQNKPIEFFNEGLAEELSKEGACEQAIFPDTTAVIEKCAMIG 233

Query: 239 NLAAEGGDRCDLNLVPGCMDPSSPLYDPLANVDDGSCPLDSD 280
           NL+ EGGDRC+LNLVPGC+DPSSPLYDP+ANVDDGSCP++ D
Sbjct: 234 NLSKEGGDRCELNLVPGCIDPSSPLYDPMANVDDGSCPIEVD 275

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807532|ref|NP_001240893.1| uncharacterized protein LOC100790141 [Glycine max] gi|255639039|gb|ACU19820.1| unknown [Glycine max]

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 182/282 (64%), Positives = 224/282 (79%), Gaps = 8/282 (2%)

Query: 1   MAATAGSIFAASSQFASATRSVSCRNATPSVSSTLGSSFKGASLPRSSPKQKKTVRITGK 60
           MAAT  SIFA+S+Q        SC   +P++S+TL S F   S PRS   +KK V+ +  
Sbjct: 1   MAATNASIFASSTQ--------SCLPVSPTISNTLVSPFLNVSSPRSYLVKKKHVKFSKH 52

Query: 61  VTAAVTTATNPYEEIEEYTRPSWAMFELGKAPVYWKTMNGLPPMSGEKLKIFYNPYAKKL 120
           ++AA    T   EEI+EY  PSWA FE+G+A VYWKTMNGLPP SGEKLK+FYNP A +L
Sbjct: 53  ISAAAVATTTTTEEIQEYKLPSWAKFEIGRAAVYWKTMNGLPPSSGEKLKLFYNPAATQL 112

Query: 121 LPNEDFGIGFNGGFNQPFMCGGEPRAMLRKNRGQNDSPFYTIQICVPKHAINLIFSFTNG 180
           +PNE+FGI FNGGFNQP MCGGEPRAMLRK RG+ D+P Y+IQIC+PKHA+NLIFSFTNG
Sbjct: 113 VPNEEFGIAFNGGFNQPIMCGGEPRAMLRKYRGKADAPIYSIQICIPKHALNLIFSFTNG 172

Query: 181 VEWDGPYRIKFLVPRAWRNKPMDFFNKGLADQLSKDGACEKAIFPDTDVVVDRCVLIGNL 240
           V+WDGPYR++F VP+A +NKP+DFFNKGLA++LSK+GACE+AIFPDT+ V+ +C +IGNL
Sbjct: 173 VDWDGPYRLQFQVPKALQNKPIDFFNKGLAEELSKEGACEQAIFPDTNKVITKCAMIGNL 232

Query: 241 AAEGGDRCDLNLVPGCMDPSSPLYDPLANVDDGSCPLDSDIE 282
           + EGGDRCDLN V GC DPSS LY+PLANVDDG+C ++ D E
Sbjct: 233 SKEGGDRCDLNFVVGCTDPSSHLYNPLANVDDGTCTIELDSE 274

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436138|ref|XP_004135851.1| PREDICTED: uncharacterized protein LOC101207565 [Cucumis sativus]

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 184/287 (64%), Positives = 220/287 (76%), Gaps = 7/287 (2%)

Query: 1   MAATAGSIFAAS----SQFASATRSVSCRNATPSVSSTLGSSFKGASLPRSSPKQKKTVR 56
           MAAT   IFA+S        +  R  SC  +T ++ S +  S     LP +   + +TVR
Sbjct: 1   MAATNAPIFASSFPTSLPITTQRRGESCPQSTRTLGSGISGSSFSKCLPNNKDVRFRTVR 60

Query: 57  ITGKVTAAVTTATNPYEEIEEYTRPSWAMFELGKAPVYWKTMNGLPPMSGEKLKIFYNPY 116
              KV AAV    +P EE+ E   PSW +FELGKAPVYWKT+NGLPP +GEKLK+FYNP 
Sbjct: 61  ---KVNAAVAVEASPAEEMTEIKLPSWTLFELGKAPVYWKTVNGLPPTAGEKLKLFYNPA 117

Query: 117 AKKLLPNEDFGIGFNGGFNQPFMCGGEPRAMLRKNRGQNDSPFYTIQICVPKHAINLIFS 176
           A  L PN+DFGI FNGGFNQP MCGGEPRAMLRK+RG+ D P YTIQIC+PKHAINLIFS
Sbjct: 118 ATNLAPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICIPKHAINLIFS 177

Query: 177 FTNGVEWDGPYRIKFLVPRAWRNKPMDFFNKGLADQLSKDGACEKAIFPDTDVVVDRCVL 236
           FTNG +WDGPYR++F VP+AW+NKP+DFFN+GLA++LSK+GAC++AIFPDT VVV RC +
Sbjct: 178 FTNGTDWDGPYRLQFQVPKAWQNKPIDFFNQGLAEELSKEGACDRAIFPDTSVVVTRCAM 237

Query: 237 IGNLAAEGGDRCDLNLVPGCMDPSSPLYDPLANVDDGSCPLDSDIED 283
           IGNL  EGGDRCDLNLV GC DPSS L++PLANVDDGSCP+D+D ED
Sbjct: 238 IGNLTVEGGDRCDLNLVLGCTDPSSHLFNPLANVDDGSCPIDTDTED 284

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449509289|ref|XP_004163546.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101207565 [Cucumis sativus]

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 184/287 (64%), Positives = 220/287 (76%), Gaps = 7/287 (2%)

Query: 1   MAATAGSIFAAS----SQFASATRSVSCRNATPSVSSTLGSSFKGASLPRSSPKQKKTVR 56
           MAAT   IFA+S        +  R  SC  +T ++ S +  S     LP +   + +TVR
Sbjct: 1   MAATNAPIFASSFPTSLPITTQRRGESCPQSTRTLGSGISGSSFSKCLPNNKDVRFRTVR 60

Query: 57  ITGKVTAAVTTATNPYEEIEEYTRPSWAMFELGKAPVYWKTMNGLPPMSGEKLKIFYNPY 116
              KV AAV    +P EE+ E   PSW +FELGKAPVYWKT+NGLPP +GEKLK+FYNP 
Sbjct: 61  ---KVNAAVAVEASPAEEMTEIKLPSWTLFELGKAPVYWKTVNGLPPTAGEKLKLFYNPA 117

Query: 117 AKKLLPNEDFGIGFNGGFNQPFMCGGEPRAMLRKNRGQNDSPFYTIQICVPKHAINLIFS 176
           A  L PN+DFGI FNGGFNQP MCGGEPRAMLRK+RG+ D P YTIQIC+PKHAINLIFS
Sbjct: 118 ATNLAPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICIPKHAINLIFS 177

Query: 177 FTNGVEWDGPYRIKFLVPRAWRNKPMDFFNKGLADQLSKDGACEKAIFPDTDVVVDRCVL 236
           FTNG +WDGPYR++F VP+AW+NKP+DFFN+GLA++LSK+GAC++AIFPDT VVV RC +
Sbjct: 178 FTNGTDWDGPYRLQFXVPKAWQNKPIDFFNQGLAEELSKEGACDRAIFPDTSVVVTRCAM 237

Query: 237 IGNLAAEGGDRCDLNLVPGCMDPSSPLYDPLANVDDGSCPLDSDIED 283
           IGNL  EGGDRCDLNLV GC DPSS L++PLANVDDGSCP+D+D ED
Sbjct: 238 IGNLTVEGGDRCDLNLVLGCTDPSSHLFNPLANVDDGSCPIDTDTED 284

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388501902|gb|AFK39017.1| unknown [Lotus japonicus]

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 180/281 (64%), Positives = 221/281 (78%), Gaps = 11/281 (3%)

Query: 1   MAATAGSIFAASS-QFASATRSVSCRNATPSVSSTLGSSFKGASLPRSSPKQKKTVRITG 59
           MAAT  SIFA+S+ Q     R          + +TL S+F   SLPR    +++ V++T 
Sbjct: 1   MAATNASIFASSTTQPCLPIR----------IPNTLASTFLNVSLPRCYLVKERNVKVTR 50

Query: 60  KVTAAVTTATNPYEEIEEYTRPSWAMFELGKAPVYWKTMNGLPPMSGEKLKIFYNPYAKK 119
            + AAV  AT P +EIEEY  PSWA FELGKA VYWKTMNGLPP SGEKLK+FYNP + +
Sbjct: 51  TINAAVAVATTPAQEIEEYKIPSWANFELGKASVYWKTMNGLPPTSGEKLKLFYNPTSTQ 110

Query: 120 LLPNEDFGIGFNGGFNQPFMCGGEPRAMLRKNRGQNDSPFYTIQICVPKHAINLIFSFTN 179
           L PNE+FGI FNGGFNQP MCGGEPRAMLRK+RG+ D+P Y+IQICVPKHA+NLIFSFTN
Sbjct: 111 LAPNEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYSIQICVPKHALNLIFSFTN 170

Query: 180 GVEWDGPYRIKFLVPRAWRNKPMDFFNKGLADQLSKDGACEKAIFPDTDVVVDRCVLIGN 239
           GV+WDGPYR++F VP+  +NKP++FFN+GLA++L K+GACE+AIFPD++ V+ +C ++GN
Sbjct: 171 GVDWDGPYRLQFQVPKVLQNKPIEFFNEGLAEELGKEGACEQAIFPDSNKVITKCAMLGN 230

Query: 240 LAAEGGDRCDLNLVPGCMDPSSPLYDPLANVDDGSCPLDSD 280
           L  EGGDRCDLNLV GC DPSS LY+PLANVDDG+CPLD D
Sbjct: 231 LTVEGGDRCDLNLVEGCTDPSSHLYNPLANVDDGTCPLDLD 271

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356519306|ref|XP_003528314.1| PREDICTED: uncharacterized protein LOC100818459 [Glycine max]

 Score =  368 bits (945), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 178/280 (63%), Positives = 222/280 (79%), Gaps = 8/280 (2%)

Query: 1   MAATAGSIFAASSQFASATRSVSCRNATPSVSSTLGSSFKGASLPRSSPKQKKTVRITGK 60
           MAAT  SIFA+S+Q         C    P++ +TL + F   S PRS   +KK V+ + K
Sbjct: 1   MAATNASIFASSTQ--------PCLPVPPTIPNTLATPFLNVSSPRSYLVKKKHVKFSKK 52

Query: 61  VTAAVTTATNPYEEIEEYTRPSWAMFELGKAPVYWKTMNGLPPMSGEKLKIFYNPYAKKL 120
           ++AA    T   EEI+EY  PSWA FE+G+A VYWKTMNGLPP SGEKLK+FYNP A +L
Sbjct: 53  ISAAAVATTTTTEEIQEYKLPSWAKFEIGRAAVYWKTMNGLPPTSGEKLKLFYNPAATQL 112

Query: 121 LPNEDFGIGFNGGFNQPFMCGGEPRAMLRKNRGQNDSPFYTIQICVPKHAINLIFSFTNG 180
           +PNE+FGI FNGGFNQP MCGGEPRAMLRK+RG+ D+P Y+IQIC+PKHA+NLIFSFTNG
Sbjct: 113 VPNEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYSIQICIPKHALNLIFSFTNG 172

Query: 181 VEWDGPYRIKFLVPRAWRNKPMDFFNKGLADQLSKDGACEKAIFPDTDVVVDRCVLIGNL 240
           V+WDGPYR++F VP+A +NKP+DFFNKGLA++LSK+GACE+AIFPDT+ ++ +C +IGNL
Sbjct: 173 VDWDGPYRLQFQVPKALQNKPIDFFNKGLAEELSKEGACEQAIFPDTNKIITKCAMIGNL 232

Query: 241 AAEGGDRCDLNLVPGCMDPSSPLYDPLANVDDGSCPLDSD 280
           + EGGDRCDLN V GC DPSS LY+PLANVDDG+C ++ D
Sbjct: 233 SKEGGDRCDLNFVLGCTDPSSHLYNPLANVDDGTCTIELD 272

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	283
TAIR|locus:2093287	268	PIFI "AT3G15840" [Arabidopsis	0.876	0.925	0.639	1.4e-89

TAIR|locus:2093287 PIFI "AT3G15840" [Arabidopsis thaliana (taxid:3702)]

 Score = 894 (319.8 bits), Expect = 1.4e-89, P = 1.4e-89
 Identities = 163/255 (63%), Positives = 202/255 (79%)

Query:    30 SVSSTLGSSFKGASLPRSSPKQKKTVRITGKXXXXXXXXXNPYEEIEEYTRPSWAMFELG 89
             S  S L SS  G  L R  P++K  +++             P EEI+EY  PSWAMFE+G
Sbjct:    20 SKRSFLYSSRIGPIL-RRFPRKKLDLQVKAVATTLA-----PLEEIKEYKLPSWAMFEMG 73

Query:    90 KAPVYWKTMNGLPPMSGEKLKIFYNPYAKKLLPNEDFGIGFNGGFNQPFMCGGEPRAMLR 149
              APVYWKTMNGLPP SGEKLK+FYNP A KL  NED+G+ FNGGFNQP MCGGEPRAML+
Sbjct:    74 TAPVYWKTMNGLPPTSGEKLKLFYNPAASKLTLNEDYGVAFNGGFNQPIMCGGEPRAMLK 133

Query:   150 KNRGQNDSPFYTIQICVPKHAINLIFSFTNGVEWDGPYRIKFLVPRAWRNKPMDFFNKGL 209
             K+RG+ DSP YT+QIC+PKHA+NLIFSFTNGV+WDGPYR++F VP+ W+NKP++FFN+GL
Sbjct:   134 KDRGKADSPIYTMQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKRWQNKPIEFFNEGL 193

Query:   210 ADQLSKDGACEKAIFPDTDVVVDRCVLIGNLAAEGGDRCDLNLVPGCMDPSSPLYDPLAN 269
             A++LS+DGACE+AIFPD++VV  RC +I NL  EGGDRC+L+LVPGCMD +S  ++P AN
Sbjct:   194 ANELSQDGACERAIFPDSNVVPTRCTMIANLTVEGGDRCNLDLVPGCMDTNSEHFNPYAN 253

Query:   270 VDDGSCPLD-SDIED 283
             VDDGSCPL+ SD ++
Sbjct:   254 VDDGSCPLELSDSDE 268


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.138   0.438    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      283       257   0.00086  114 3  11 22  0.49    33
                                                     32  0.48    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  220 KB (2121 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.24u 0.11s 21.35t   Elapsed:  00:00:01
  Total cpu time:  21.24u 0.11s 21.35t   Elapsed:  00:00:01
  Start:  Thu May  9 21:31:02 2013   End:  Thu May  9 21:31:03 2013

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010478 "chlororespiration" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	283
PF03423	87	CBM_25: Carbohydrate binding domain (family 25); I	97.6
PLN02316	1036	synthase/transferase	96.47
PLN02316	1036	synthase/transferase	96.15

>PF03423 CBM_25: Carbohydrate binding domain (family 25); InterPro: IPR005085 A carbohydrate-binding module (CBM) is defined as a contiguous amino acid sequence within a carbohydrate-active enzyme with a discreet fold having carbohydrate-binding activity

Probab=97.60  E-value=7.8e-05  Score=56.87  Aligned_cols=76  Identities=25%  Similarity=0.528  Sum_probs=39.5

Q ss_pred             CCceEEEEccccCCCCCCCceeeeecCCCCCccccCCchhhhhhhhhCCCCCCceEEEeeeccceeeEEEEeecC-CCCC
Q 023336          106 GEKLKIFYNPYAKKLLPNEDFGIGFNGGFNQPFMCGGEPRAMLRKNRGQNDSPFYTIQICVPKHAINLIFSFTNG-VEWD  184 (283)
Q Consensus       106 Ge~L~lfyNp~as~l~PNe~fGiaFNGGFNQPIMCGGEPR~M~~k~RGkad~PiYtI~I~vPkHa~~LiFSFTnG-~~WD  184 (283)
                      |+.++|||||..+.|.-..  -|=.-+|||. -. ....-.|.+... .....-++..|.||+.|..|.|-|+|| -.||
T Consensus         1 G~~vtVyYn~~~~~l~g~~--~v~~~~G~n~-W~-~~~~~~m~~~~~-~~~~~~~~~tv~vP~~a~~~dfvF~dg~~~wD   75 (87)
T PF03423_consen    1 GETVTVYYNPSLTALSGAP--NVHLHGGFNR-WT-HVPGFGMTKMCV-PDEGGWWKATVDVPEDAYVMDFVFNDGAGNWD   75 (87)
T ss_dssp             -SEEEEEE---E-SSS-S---EEEEEETTS--B--SSS-EE-EEESS----TTEEEEEEE--TTTSEEEEEEE-SSS-EE
T ss_pred             CCEEEEEEEeCCCCCCCCC--cEEEEecCCC-CC-cCCCCCcceeee-eecCCEEEEEEEEcCCceEEEEEEcCCCCcEe
Confidence            7899999999877775222  2444455542 11 111223433221 111678999999999999999999998 4788


Q ss_pred             Cc
Q 023336          185 GP  186 (283)
Q Consensus       185 Gp  186 (283)
                      --
T Consensus        76 NN   77 (87)
T PF03423_consen   76 NN   77 (87)
T ss_dssp             ST
T ss_pred             CC
Confidence            53

A few exceptions are CBMs in cellulosomal scaffolding proteins and rare instances of independent putative CBMs. The requirement of CBMs existing as modules within larger enzymes sets this class of carbohydrate-binding protein apart from other non-catalytic sugar binding proteins such as lectins and sugar transport proteins. CBMs were previously classified as cellulose-binding domains (CBDs) based on the initial discovery of several modules that bound cellulose [, ]. However, additional modules in carbohydrate-active enzymes are continually being found that bind carbohydrates other than cellulose yet otherwise meet the CBM criteria, hence the need to reclassify these polypeptides using more inclusive terminology. Previous classification of cellulose-binding domains were based on amino acid similarity. Groupings of CBDs were called "Types" and numbered with roman numerals (e.g. Type I or Type II CBDs). In keeping with the glycoside hydrolase classification, these groupings are now called families and numbered with Arabic numerals. Families 1 to 13 are the same as Types I to XIII. For a detailed review on the structure and binding modes of CBMs see []. This entry represents CBM25 from CAZY which has a starch-binding function as has been demonstrated in one case.; PDB: 2LAB_A 2C3X_B 2C3V_A 2C3W_C 2LAA_A.

>PLN02316 synthase/transferase

Probab=96.47  E-value=0.0072  Score=64.12  Aligned_cols=93  Identities=20%  Similarity=0.352  Sum_probs=69.1

Q ss_pred             CCCCCCCCCceEEEEccccCCCCCCCceeeeecCCCCCccccCCchhhhhhhhhCCCCCCceEEEeeeccceeeEEEEee
Q 023336           99 NGLPPMSGEKLKIFYNPYAKKLLPNEDFGIGFNGGFNQPFMCGGEPRAMLRKNRGQNDSPFYTIQICVPKHAINLIFSFT  178 (283)
Q Consensus        99 nGlpP~sGe~L~lfyNp~as~l~PNe~fGiaFNGGFNQPIMCGGEPR~M~~k~RGkad~PiYtI~I~vPkHa~~LiFSFT  178 (283)
                      ....|-+|+.++|||||+-+.|.-.+  -|=+.||||.=..-.+.+-.|.+-+.+.-+  .+.-.|.||+-|..|-|-|+
T Consensus       321 ~P~~~~aG~~v~lyYN~~~~~L~~~~--~v~i~gg~N~W~~~~~~~~~~~~~~~~~g~--ww~a~v~vP~~A~~mDfVFs  396 (1036)
T PLN02316        321 EPSEFKAGDTVKLYYNRSSGPLAHST--EIWIHGGYNNWIDGLSIVEKLVKSEEKDGD--WWYAEVVVPERALVLDWVFA  396 (1036)
T ss_pred             cCCCcCCCCEEEEEECCCCCCCCCCC--cEEEEEeEcCCCCCCcccceeecccCCCCC--EEEEEEecCCCceEEEEEEe
Confidence            35678999999999999999996433  467788888644333322234443433333  88999999999999999999


Q ss_pred             cC-----CCCCCceeEEEecCc
Q 023336          179 NG-----VEWDGPYRIKFLVPR  195 (283)
Q Consensus       179 nG-----~~WDGpY~L~f~VP~  195 (283)
                      ||     ..||--....|.+|=
T Consensus       397 dg~~~~~~~yDNn~~~Dyh~~v  418 (1036)
T PLN02316        397 DGPPGNARNYDNNGRQDFHAIV  418 (1036)
T ss_pred             cCCcccccccccCCCcceeeec
Confidence            99     699988777776654

>PLN02316 synthase/transferase

Probab=96.15  E-value=0.011  Score=62.83  Aligned_cols=124  Identities=21%  Similarity=0.330  Sum_probs=87.6

Q ss_pred             CCCCCCCCCceEEEEccccCCCCCCCceeeeecCCCCCccccCC--chhhhhhhhhCCCCCCceEEEeeeccceeeEEEE
Q 023336           99 NGLPPMSGEKLKIFYNPYAKKLLPNEDFGIGFNGGFNQPFMCGG--EPRAMLRKNRGQNDSPFYTIQICVPKHAINLIFS  176 (283)
Q Consensus        99 nGlpP~sGe~L~lfyNp~as~l~PNe~fGiaFNGGFNQPIMCGG--EPR~M~~k~RGkad~PiYtI~I~vPkHa~~LiFS  176 (283)
                      .=+-|.+|+.++|||||.-+-|.-..+  |=|-||||.=.---|  .|-.|.+.+-|    .-+.-.|.||.-|..+-|-
T Consensus       483 eP~~~~aG~~v~v~Yn~~~t~l~~~~e--v~~~g~~NrWth~~~~~~~~~m~~~~~g----~~~~a~v~vP~da~~mdfv  556 (1036)
T PLN02316        483 EPLEVQAGTTVTVLYNPANTVLNGKPE--VWFRGSFNRWTHRLGPLPPQKMVPADNG----SHLKATVKVPLDAYMMDFV  556 (1036)
T ss_pred             cCCCCCCCCEEEEEECCCCCcCCCCce--EEEEccccCcCCCCCCCCceeeeecCCC----ceEEEEEEccccceEEEEE
Confidence            345689999999999999888875544  779999997555555  58888888766    5778999999999999999


Q ss_pred             eecCC---CCCCceeEEEecCcc---------------cccCCh------hhhhhhHHHhhhccCcccccccCCCc
Q 023336          177 FTNGV---EWDGPYRIKFLVPRA---------------WRNKPM------DFFNKGLADQLSKDGACEKAIFPDTD  228 (283)
Q Consensus       177 FTnG~---~WDGpY~L~f~VP~~---------------~~nkP~------~fFnegLa~eLs~eGACd~AIfPd~~  228 (283)
                      |.+|-   .||--....+.+|-.               +---|.      .=.=-+|+++|.+.|.--.-|-|.-.
T Consensus       557 Fs~~~~g~~yDn~~~~dyh~~v~g~~~~~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~  632 (1036)
T PLN02316        557 FSEKEEGGIFDNRNGLDYHIPVFGGIAKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYD  632 (1036)
T ss_pred             EecCCCCCCcCCCCCcCCcccccCCCCCCCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCc
Confidence            96653   466655554444321               111121      12336788999999976566666543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	283
2c3v_A	102	Alpha-amylase G-6; carbohydrate-binding module, st	93.23
2laa_A	104	Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Pa	91.64

>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*

Probab=93.23  E-value=0.087  Score=41.35  Aligned_cols=71  Identities=17%  Similarity=0.359  Sum_probs=44.8

Q ss_pred             CCCCCceEEEEccccCCCCCCCceeeeecCCCCCccccCCchhhhhhhhhCCCCCCceEEEeeeccceeeEEEEeecCC-
Q 023336          103 PMSGEKLKIFYNPYAKKLLPNEDFGIGFNGGFNQPFMCGGEPRAMLRKNRGQNDSPFYTIQICVPKHAINLIFSFTNGV-  181 (283)
Q Consensus       103 P~sGe~L~lfyNp~as~l~PNe~fGiaFNGGFNQPIMCGGEPR~M~~k~RGkad~PiYtI~I~vPkHa~~LiFSFTnG~-  181 (283)
                      |..|+..+|||+..  -=.++-.||.+- |.+.+.=   |  -.|.+.    .|.=-|...|.+|. +-.|+|-|+||. 
T Consensus         6 p~~g~~vTvyY~sg--~~~~ylHy~~~~-g~Wt~vp---g--v~M~~~----~~~Gw~~~TI~~~~-~~~l~~~F~dG~~   72 (102)
T 2c3v_A            6 SGDATDITIYYKTG--WTHPHIHYSLNQ-GAWTTLP---G--VPLTKS----EXEGXVKVTIEAEE-GSQLRAAFNNGSG   72 (102)
T ss_dssp             --CCCSEEEEEECC--CSSCEEEEEETT-CCBCCTT---C--EECEEC----SSTTEEEEEECCCT-TCEEEEEEECSSS
T ss_pred             CCCCCEEEEEEcCC--CCcEEEEEeCCC-CCcccCC---C--cCcccc----ccCCceEEEEecCC-CceEEEEEeCCCc
Confidence            34499999999933  334556666322 3465531   1  124332    24445688899984 689999999999 


Q ss_pred             CCCCc
Q 023336          182 EWDGP  186 (283)
Q Consensus       182 ~WDGp  186 (283)
                      .||-.
T Consensus        73 ~WDNN   77 (102)
T 2c3v_A           73 QWDNN   77 (102)
T ss_dssp             CEECG
T ss_pred             ccccC
Confidence            79954

>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A

Probab=91.64  E-value=0.12  Score=40.66  Aligned_cols=68  Identities=22%  Similarity=0.388  Sum_probs=44.5

Q ss_pred             CCCceEEEEccccCCCCCCCceeeeecCCCCCccccCCchh-hhhhhhhCCCCCCce-EEEeeeccceeeEEEEeecCC-
Q 023336          105 SGEKLKIFYNPYAKKLLPNEDFGIGFNGGFNQPFMCGGEPR-AMLRKNRGQNDSPFY-TIQICVPKHAINLIFSFTNGV-  181 (283)
Q Consensus       105 sGe~L~lfyNp~as~l~PNe~fGiaFNGGFNQPIMCGGEPR-~M~~k~RGkad~PiY-tI~I~vPkHa~~LiFSFTnG~-  181 (283)
                      .|+.++|||++.+++.  .-.||.+- |..+++      |= .|.+.     .-|-| +..|.||. +..|+|-|+||. 
T Consensus         3 ~g~~vtiyY~~g~~~v--ylHyg~~~-g~Wt~~------~~v~M~~~-----~~~gw~~~TI~l~~-g~~~~~~F~dG~~   67 (104)
T 2laa_A            3 TGNKVTIYYKKGFNSP--YIHYRPAG-GSWTAA------PGVKMQDA-----EISGYAKITVDIGS-ASQLEAAFNDGNN   67 (104)
T ss_dssp             CCCEEEEEEECSSSSC--EEEEEETT-SCCCSS------SCEECEEE-----TTTTEEEEEEECTT-CSCEEEEEECSSS
T ss_pred             CCCEEEEEEcCCCCcE--EEEEcCCC-CCCCcC------Cccccccc-----cCCCeEEEEEECCC-CCEEEEEEeCCCC
Confidence            4899999999755543  33555222 456653      21 23222     11567 69999996 689999999998 


Q ss_pred             CCCCce
Q 023336          182 EWDGPY  187 (283)
Q Consensus       182 ~WDGpY  187 (283)
                      .||-.-
T Consensus        68 ~WDNn~   73 (104)
T 2laa_A           68 NWDSNN   73 (104)
T ss_dssp             CEESTT
T ss_pred             cCcCCC
Confidence            799653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00