BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023338
(283 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 3/163 (1%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQS-FSLRTVRLLMYTFTNTNARKIGPKEFIQVFH 178
FQ D+D SG+I D ELQ ALS+ + F+ TVR ++ F N + EF V+
Sbjct: 31 VFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 90
Query: 179 SLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEY 238
+ +W+ +F DRD SG ID NEL++AL G+ +S D+L+ KFD+ G I +
Sbjct: 91 YITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQG--RGQIAF 148
Query: 239 DNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFMLAVLPFL 281
D+FI+ C+ ++ LT+ F+ DT G +YE ++ V +
Sbjct: 149 DDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSIV 191
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 3/163 (1%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQS-FSLRTVRLLMYTFTNTNARKIGPKEFIQVFH 178
FQ D+D SG+I D ELQ ALS+ + F+ TVR ++ F N + EF V+
Sbjct: 30 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 89
Query: 179 SLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEY 238
+ +W+ +F DRD SG ID NEL++AL G+ +S D+L+ KFD+ G I +
Sbjct: 90 YITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQG--RGQIAF 147
Query: 239 DNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFMLAVLPFL 281
D+FI+ C+ ++ LT+ F+ DT G +YE ++ V +
Sbjct: 148 DDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSIV 190
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 3/163 (1%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQS-FSLRTVRLLMYTFTNTNARKIGPKEFIQVFH 178
FQ D+D SG+I D ELQ ALS+ + F+ TVR ++ F N + EF V+
Sbjct: 12 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 71
Query: 179 SLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEY 238
+ +W+ +F DRD SG ID NEL++AL G+ +S D+L+ KFD+ G I +
Sbjct: 72 YITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQG--RGQIAF 129
Query: 239 DNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFMLAVLPFL 281
D+FI+ C+ ++ LT+ F+ DT G +YE ++ V +
Sbjct: 130 DDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSIV 172
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 3/163 (1%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQS-FSLRTVRLLMYTFTNTNARKIGPKEFIQVFH 178
FQ D+D SG+I D ELQ ALS+ + F+ TVR ++ F N + EF V+
Sbjct: 9 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 68
Query: 179 SLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEY 238
+ +W+ +F DRD SG ID NEL++AL G+ +S D+L+ KFD+ G I +
Sbjct: 69 YITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQG--RGQIAF 126
Query: 239 DNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFMLAVLPFL 281
D+FI+ C+ ++ LT+ F+ DT G +YE ++ V +
Sbjct: 127 DDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSIV 169
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 3/163 (1%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQS-FSLRTVRLLMYTFTNTNARKIGPKEFIQVFH 178
FQ D+D SG+I D ELQ ALS+ + F+ TVR ++ F N + EF V+
Sbjct: 8 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 67
Query: 179 SLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEY 238
+ +W+ +F DRD SG ID NEL++AL G+ +S D+L+ KFD+ G I +
Sbjct: 68 YITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQG--RGQIAF 125
Query: 239 DNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFMLAVLPFL 281
D+FI+ C+ ++ LT+ F+ DT G +YE ++ V +
Sbjct: 126 DDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSIV 168
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 3/163 (1%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQS-FSLRTVRLLMYTFTNTNARKIGPKEFIQVFH 178
FQ D+D SG+I D ELQ ALS+ + F+ TVR ++ F N + EF V+
Sbjct: 12 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 71
Query: 179 SLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEY 238
+ +W+ +F DRD SG ID NEL++AL G+ +S D+L+ KFD+ G I +
Sbjct: 72 YITDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQG--RGQIAF 129
Query: 239 DNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFMLAVLPFL 281
D+FI+ C+ ++ LT+ F+ DT G +YE ++ V +
Sbjct: 130 DDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSIV 172
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 5/163 (3%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQS-FSLRTVRLLMYTFTNTNARKIGPKEFIQVFH 178
FQ D+D SG+I D ELQ ALS+ + F+ TVR ++ F N + EF V+
Sbjct: 9 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 68
Query: 179 SLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEY 238
+ +W+ +F DRD SG ID NEL++AL G+ +S D+L+ KFD+ G I +
Sbjct: 69 YITDWQNVFRTYDRDNSGMIDKNELKQALS--GYRLSDQFHDILIRKFDRQG--RGQIAF 124
Query: 239 DNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFMLAVLPFL 281
D+FI+ C+ ++ LT+ F+ DT G +YE ++ V +
Sbjct: 125 DDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSIV 167
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 86/154 (55%), Gaps = 9/154 (5%)
Query: 130 GLIDDKELQGALSSYN-----QSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWR 184
G ID ELQ L+ + F+L T RL++ + +G EF +++ L WR
Sbjct: 47 GQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWR 106
Query: 185 AMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIEC 244
F +D DRSG +D EL++AL ++GF +SP ++ + ++ T GK I +D++I C
Sbjct: 107 QHFISLDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY-STNGK---ITFDDYIAC 162
Query: 245 CLTVKGLTEKFKERDTTYSGSATFTYENFMLAVL 278
C+ ++ LT+ F+ RDT G F Y++F+ V+
Sbjct: 163 CVKLRALTDSFRRRDTAQQGVVNFPYDDFIQCVM 196
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 85/154 (55%), Gaps = 9/154 (5%)
Query: 130 GLIDDKELQGALSSYN-----QSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWR 184
G ID ELQ L+ + F+L T RL++ + +G EF +++ L WR
Sbjct: 47 GQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWR 106
Query: 185 AMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIEC 244
F D DRSG +D EL++AL ++GF +SP ++ + ++ T GK I +D++I C
Sbjct: 107 QHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY-STNGK---ITFDDYIAC 162
Query: 245 CLTVKGLTEKFKERDTTYSGSATFTYENFMLAVL 278
C+ ++ LT+ F+ RDT G F Y++F+ V+
Sbjct: 163 CVKLRALTDSFRRRDTAQQGVVNFPYDDFIQCVM 196
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 85/154 (55%), Gaps = 9/154 (5%)
Query: 130 GLIDDKELQGALSSYN-----QSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWR 184
G ID ELQ L+ + F+L T RL++ + +G EF +++ L WR
Sbjct: 16 GQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWR 75
Query: 185 AMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIEC 244
F D DRSG +D EL++AL ++GF ++P ++ + ++ +G I +D++I C
Sbjct: 76 QHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTSG----KITFDDYIAC 131
Query: 245 CLTVKGLTEKFKERDTTYSGSATFTYENFMLAVL 278
C+ ++ LT+ F+ RD+ G F+Y++F+ V+
Sbjct: 132 CVKLRALTDSFRRRDSAQQGMVNFSYDDFIQCVM 165
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 89/155 (57%), Gaps = 9/155 (5%)
Query: 130 GLIDDKELQGAL--SSYNQS---FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWR 184
G +D +ELQ L S N + FSL T R+++ + K+G F +++ +L W+
Sbjct: 14 GEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNAWK 73
Query: 185 AMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIEC 244
F VD+D SG ++ +ELR+A+ +G+ +SP L +V ++ K G I +D+++ C
Sbjct: 74 ENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNG----RIFFDDYVAC 129
Query: 245 CLTVKGLTEKFKERDTTYSGSATFTYENFMLAVLP 279
C+ ++ LT+ FK+RD GSA F Y++F+ +
Sbjct: 130 CVKLRALTDFFKKRDHLQQGSADFIYDDFLQGTMA 164
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 89/155 (57%), Gaps = 9/155 (5%)
Query: 130 GLIDDKELQGAL--SSYNQS---FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWR 184
G +D +ELQ L S N + FSL T R+++ + K+G F +++ +L W+
Sbjct: 14 GEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNAWK 73
Query: 185 AMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIEC 244
F VD+D SG ++ +ELR+A+ +G+ +SP L +V ++ K G I +D+++ C
Sbjct: 74 ENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNG----RIFFDDYVAC 129
Query: 245 CLTVKGLTEKFKERDTTYSGSATFTYENFMLAVLP 279
C+ ++ LT+ F++RD GSA F Y++F+ +
Sbjct: 130 CVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTMA 164
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 2/176 (1%)
Query: 106 PSTFPPGTDPNIVACFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNA 165
PS + ++ F+ D D SG I EL ALSS FSL T L++ + ++
Sbjct: 18 PSARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHS 77
Query: 166 RKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTK 225
+I EF + H + + R F K D G++DSNE+R AL+S G+ VS L+ K
Sbjct: 78 GEITFDEFKDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRK 137
Query: 226 FDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFMLAVLPFL 281
FD+ + ++ +D+++E + V + F D +G TFT++ F+ + L
Sbjct: 138 FDRQ--RRGSLGFDDYVELSIFVCRVRNVFAFYDRERTGQVTFTFDTFIGGSVSIL 191
>pdb|1KFX|L Chain L, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|L Chain L, Crystal Structure Of Human M-Calpain Form Ii
Length = 699
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 69/118 (58%), Gaps = 3/118 (2%)
Query: 148 FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREAL 207
FS+ T ++++ + + K+G KEF ++ +Q ++ ++ ++D DRSG ++S E+R+AL
Sbjct: 571 FSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKAL 630
Query: 208 MSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGS 265
GF + + ++V +F I++DNF+ C + ++ L + FK+ D +G+
Sbjct: 631 EEAGFKMPCQLHQVIVARF---ADDQLIIDFDNFVRCLVRLETLFKIFKQLDPENTGT 685
>pdb|1DF0|A Chain A, Crystal Structure Of M-Calpain
Length = 700
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
Query: 148 FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREAL 207
FS+ T ++++ + K+G KEF ++ +Q ++ ++ ++D DRSG ++S E+R+AL
Sbjct: 572 FSIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKAL 631
Query: 208 MSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGS 265
GF + + ++V +F I++DNF+ C + ++ L + FK+ D +G+
Sbjct: 632 EEAGFKLPCQLHQVIVARF---ADDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGT 686
>pdb|1U5I|A Chain A, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
Length = 700
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
Query: 148 FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREAL 207
FS+ T ++++ + K+G KEF ++ +Q ++ ++ ++D DRSG ++S E+R+AL
Sbjct: 572 FSIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKAL 631
Query: 208 MSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGS 265
GF + + ++V +F I++DNF+ C + ++ L + FK+ D +G+
Sbjct: 632 EEAGFKLPCQLHQVIVARF---ADDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGT 686
>pdb|3DF0|A Chain A, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|A Chain A, Structure Of M-Calpain In Complex With Calpastatin
Length = 714
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
Query: 148 FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREAL 207
FS+ T ++++ + K+G KEF ++ +Q ++ ++ ++D DRSG ++S E+R+AL
Sbjct: 572 FSIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKAL 631
Query: 208 MSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGS 265
GF + + ++V +F I++DNF+ C + ++ L + FK+ D +G+
Sbjct: 632 EEAGFKLPCQLHQVIVARF---ADDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGT 686
>pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALW|B Chain B, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|A Chain A, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1NX0|A Chain A, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX0|B Chain B, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX1|A Chain A, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX1|B Chain B, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX2|A Chain A, Calpain Domain Vi
pdb|1NX3|A Chain A, Calpain Domain Vi In Complex With The Inhibitor Pd150606
Length = 173
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 69/127 (54%), Gaps = 3/127 (2%)
Query: 148 FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREAL 207
F + T R ++ + K+G +EF ++++++ W+A++++ D DRSG I S+EL A
Sbjct: 44 FGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQAIYKQFDVDRSGTIGSSELPGAF 103
Query: 208 MSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSAT 267
+ GF ++ + +++ ++ GG +++DNFI C + + + FK D +G
Sbjct: 104 EAAGFHLNEHLYSMIIRRYSDEGGN---MDFDNFISCLVRLDAMFRAFKSLDKDGTGQIQ 160
Query: 268 FTYENFM 274
+ ++
Sbjct: 161 VNIQEWL 167
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 70/128 (54%), Gaps = 5/128 (3%)
Query: 148 FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREAL 207
F + T R ++ + K+G +EF ++++++ W+ ++++ D DRSG I SNEL A
Sbjct: 55 FGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAF 114
Query: 208 MSLGFAVSPVVLDLLVTKF-DKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSA 266
+ GF ++ + +++ ++ D+TG +++DNFI C + + + F+ D +G
Sbjct: 115 EAAGFHLNQHIYSMIIRRYSDETGN----MDFDNFISCLVRLDAMFRAFRSLDKNGTGQI 170
Query: 267 TFTYENFM 274
+ ++
Sbjct: 171 QVNIQEWL 178
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 70/128 (54%), Gaps = 5/128 (3%)
Query: 148 FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREAL 207
F + T R ++ + K+G +EF ++++++ W+ ++++ D DRSG I SNEL A
Sbjct: 44 FGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAF 103
Query: 208 MSLGFAVSPVVLDLLVTKF-DKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSA 266
+ GF ++ + +++ ++ D+TG +++DNFI C + + + F+ D +G
Sbjct: 104 EAAGFHLNQHIYSMIIRRYSDETGN----MDFDNFISCLVRLDAMFRAFRSLDKNGTGQI 159
Query: 267 TFTYENFM 274
+ ++
Sbjct: 160 QVNIQEWL 167
>pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound
pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound
Length = 184
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 70/128 (54%), Gaps = 5/128 (3%)
Query: 148 FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREAL 207
F + T R ++ + K+G +EF ++++++ W+ ++++ D DRSG I SNEL A
Sbjct: 55 FGIDTSRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAF 114
Query: 208 MSLGFAVSPVVLDLLVTKF-DKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSA 266
+ GF ++ + +++ ++ D+TG +++DNFI C + + + F+ D +G
Sbjct: 115 EAAGFHLNQHIYSMIIRRYSDETGN----MDFDNFISCLVRLDAMFRAFRSLDKNGTGQI 170
Query: 267 TFTYENFM 274
+ ++
Sbjct: 171 QVNIQEWL 178
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 70/128 (54%), Gaps = 5/128 (3%)
Query: 148 FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREAL 207
F + T R ++ + K+G +EF ++++++ W+ ++++ + DRSG I SNEL A
Sbjct: 771 FGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQGIYKRFETDRSGTIGSNELPGAF 830
Query: 208 MSLGFAVSPVVLDLLVTKF-DKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSA 266
+ GF ++ + +++ ++ D+TG +++DNFI C + + + F+ D +G
Sbjct: 831 EAAGFHLNQHIYSMIIRRYSDETGN----MDFDNFISCLVRLDAMFRAFRSLDKNGTGQI 886
Query: 267 TFTYENFM 274
+ ++
Sbjct: 887 QVNIQEWL 894
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 11/142 (7%)
Query: 132 IDDKELQGALSSY--------NQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNW 183
I KELQ L+ FSL + R ++ K+G EF +++ ++N+
Sbjct: 550 ISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNY 609
Query: 184 RAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIE 243
+F K D D+SG + + E+R A+ + GF + + ++V +F I++DNF+
Sbjct: 610 LTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARF---ADDELIIDFDNFVR 666
Query: 244 CCLTVKGLTEKFKERDTTYSGS 265
C + ++ L + FK+ D +G+
Sbjct: 667 CLVRLEILFKIFKQLDPENTGT 688
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 69/127 (54%), Gaps = 3/127 (2%)
Query: 148 FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREAL 207
F + T R ++ + K+G +EF ++++++ W+A++++ D DRSG I S+EL A
Sbjct: 55 FGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKRWQAIYKQFDTDRSGTICSSELPGAF 114
Query: 208 MSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSAT 267
+ GF ++ + ++++ ++ G +++DNFI C + + + FK D +G
Sbjct: 115 EAAGFHLNEHLYNMIIRRYSDESGN---MDFDNFISCLVRLDAMFRAFKSLDKDGTGQIQ 171
Query: 268 FTYENFM 274
+ ++
Sbjct: 172 VNIQEWL 178
>pdb|1NP8|A Chain A, 18-K C-Terminally Trunucated Small Subunit Of Calpain
pdb|1NP8|B Chain B, 18-K C-Terminally Trunucated Small Subunit Of Calpain
Length = 159
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 65/113 (57%), Gaps = 5/113 (4%)
Query: 148 FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREAL 207
F + T R ++ + K+G +EF ++++++ W+ ++++ D DRSG I SNEL A
Sbjct: 51 FGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAF 110
Query: 208 MSLGFAVSPVVLDLLVTKF-DKTGGKSKAIEYDNFIECCLTVKGLTEKFKERD 259
+ GF ++ + +++ ++ D+TG +++DNFI C + + + F+ D
Sbjct: 111 EAAGFHLNQHIYSMIIRRYSDETGN----MDFDNFISCLVRLDAMFRAFRSLD 159
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 117 IVACFQLADRDNSGLIDDKELQGALSSYNQ---SFSLRTVRLLMYTFTNTNARKIGPKEF 173
I CFQ+ D+DN G + +EL AL S + + L T++ NA++ F
Sbjct: 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIK------GQLNAKEFDLATF 60
Query: 174 IQVFHS-----LQNWRAM---FEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTK 225
V+ + + M F +D++ +G I ELR+ L++LG A++ ++ L+ +
Sbjct: 61 KTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKE 120
Query: 226 FDKTGGKSKAIEYDNFIECCLT 247
+G AI Y++F++ +T
Sbjct: 121 VSVSG--DGAINYESFVDMLVT 140
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 44.7 bits (104), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 10/80 (12%)
Query: 181 QNWRAMFEKVDRDRSGKIDSNELREALMSLGFAV-SPVVLDLLVTKFDKTGGKSKAIEYD 239
Q + F+ D +++G ID +EL+ A+ +LGF V P +L+L+ ++D+ G + I +D
Sbjct: 7 QEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELM-NEYDREG--NGYIGFD 63
Query: 240 NFIECCLTVKGLTEKFKERD 259
+F++ +TEK K RD
Sbjct: 64 DFLDI------MTEKIKNRD 77
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%)
Query: 107 STFPPGTDPNIVACFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNAR 166
+T P I F DRD SG ++ EL S +T +M F
Sbjct: 43 NTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNG 102
Query: 167 KIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVS 215
I EF+ ++ ++ +F DR+RSG ++ +E+ AL LGF ++
Sbjct: 103 HISFYEFMAMYKFMELAYNLFVMNDRNRSGTLEPHEILPALQQLGFYIN 151
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 187 FEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFD 227
F VDRDRSG ++ NEL G +SP ++ FD
Sbjct: 57 FMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFD 97
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 15/136 (11%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHS 179
F L D+D G I KEL + S Q+ T L +A G +F +
Sbjct: 316 AFSLFDKDGDGTITTKELGTVMRSLGQN---PTEAELQDMINEVDADGNGTIDFPEFLTM 372
Query: 180 LQNW----------RAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKT 229
+ W R F D+D +G I + ELR + +LG ++ +D ++ + D
Sbjct: 373 MARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 432
Query: 230 GGKSKAIEYDNFIECC 245
G + Y+ F++
Sbjct: 433 G--DGQVNYEEFVQMM 446
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 113 TDPNIVACFQLADRDNSGLIDDKELQGAL---SSYNQSFSLRTVRLLMYTFTNTNARKIG 169
TD + F++ D+D SG I+++EL+G L S++ + + + L+ + + KIG
Sbjct: 39 TDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIG 98
Query: 170 PKEFIQV 176
EF ++
Sbjct: 99 ADEFAKM 105
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 315 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMAR 374
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 375 KMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 432
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 433 DGQVNYEEFVQMM 445
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 181 QNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDN 240
Q R F+ D D SG ID+ EL+ A+ +LGF + ++++ DK G S I+++
Sbjct: 30 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDG--SGTIDFEE 87
Query: 241 FIECCLTVK 249
F+ +T K
Sbjct: 88 FL-TMMTAK 95
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 315 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMAR 374
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 375 KMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 432
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 433 DGQVNYEEFVQMM 445
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 181 QNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDN 240
Q R F+ D D SG ID+ EL+ A+ +LGF + ++ DK G S I+++
Sbjct: 8 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDG--SGTIDFEE 65
Query: 241 FIECCLTVKGLTEKFKERDT 260
F++ +T K ERD+
Sbjct: 66 FLQM------MTAKMGERDS 79
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 7/122 (5%)
Query: 116 NIVACFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQ 175
I F L D D SG ID KEL+ A+ + ++ ++ + I +EF+Q
Sbjct: 9 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQ 68
Query: 176 VFHSLQNWRAMFEKV-------DRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDK 228
+ + R E++ D D +GKI L+ LG ++ L ++ + D+
Sbjct: 69 MMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADR 128
Query: 229 TG 230
G
Sbjct: 129 DG 130
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 315 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMAR 374
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 375 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 432
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 433 DGQVNYEEFVQMM 445
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 317 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 376
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 377 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 434
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 435 DGQVNYEEFVQMM 447
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 316 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 375
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 376 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 433
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 434 DGQVNYEEFVQMM 446
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 316 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 375
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 376 KMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 433
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 434 DGQVNYEEFVQMM 446
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 181 QNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDN 240
Q R F+ D D SG ID+ EL+ A+ +LGF + ++++ DK G S I+++
Sbjct: 28 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDG--SGTIDFEE 85
Query: 241 FIECCLTVKGLTEKFKERDT 260
F LT+ +T K ERD+
Sbjct: 86 F----LTM--MTAKMGERDS 99
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 9/134 (6%)
Query: 116 NIVACFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQ 175
I F L D D SG ID KEL+ A+ + ++ ++ + I +EF+
Sbjct: 29 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLT 88
Query: 176 VFHSLQNWRAMFEKV-------DRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDK 228
+ + R E++ D D SG I +LR LG ++ L ++ + D+
Sbjct: 89 MMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADR 148
Query: 229 TGGKSKAIEYDNFI 242
I+ D FI
Sbjct: 149 ND--DNEIDEDEFI 160
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/81 (20%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Query: 99 NPFASLMPSTF-PPGTDPNIVACFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLM 157
F ++M + + I+ F+L D DNSG I K+L+ ++ + ++ ++
Sbjct: 84 EEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMI 143
Query: 158 YTFTNTNARKIGPKEFIQVFH 178
+ +I EFI++
Sbjct: 144 AEADRNDDNEIDEDEFIRIMK 164
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 316 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMAR 375
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 376 KMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 433
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 434 DGQVNYEEFVQMM 446
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 17/141 (12%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHS 179
F L D+D G I +EL + S +Q+ T L + +A G EF + F S
Sbjct: 15 AFGLFDKDGDGCITVEELATVIRSLDQN---PTEEELQDMISEVDADGNGTIEFDE-FLS 70
Query: 180 L-----------QNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDK 228
L + + F+ D+D++G I ++ELR +++LG ++ ++ ++ + D
Sbjct: 71 LMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADL 130
Query: 229 TGGKSKAIEYDNFIECCLTVK 249
G + Y+ F++ +TV+
Sbjct: 131 DG--DGQVNYEEFVKMMMTVR 149
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 316 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 375
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 376 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 433
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 434 DGQVNYEEFVQMM 446
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 279 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 338
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 339 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 396
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 397 DGQVNYEEFVQMM 409
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 282 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 341
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 342 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 399
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 400 DGQVNYEEFVQMM 412
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 282 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 341
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 342 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 399
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 400 DGQVNYEEFVQMM 412
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 46/109 (42%)
Query: 107 STFPPGTDPNIVACFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNAR 166
+T P I F DRD SG ++ EL S +T +M F
Sbjct: 43 NTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNG 102
Query: 167 KIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVS 215
I EF+ ++ ++ +F R RSG ++ +E+ AL LGF ++
Sbjct: 103 HISFYEFMAMYKFMELAYNLFVMNARARSGTLEPHEILPALQQLGFYIN 151
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 187 FEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFD 227
F VDRDRSG ++ NEL G +SP ++ FD
Sbjct: 57 FMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFD 97
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 9/131 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 307 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMAR 366
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 367 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 424
Query: 233 SKAIEYDNFIE 243
+ Y+ F++
Sbjct: 425 DGQVNYEEFVQ 435
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 179 SLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEY 238
L+ R F+ DRD +G I EL A+ SLG+ + V L++++ + D G +++
Sbjct: 34 ELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDG--DGQVDF 91
Query: 239 DNFI 242
+ F+
Sbjct: 92 EEFV 95
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 9/134 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 16 AFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAR 75
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + + F D+D++G I + ELR + +LG ++ +D ++ + D G
Sbjct: 76 KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDG-- 133
Query: 233 SKAIEYDNFIECCL 246
I YD F++ +
Sbjct: 134 DGQINYDEFVKVMM 147
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 9/134 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 16 AFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAR 75
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + + F D+D++G I + ELR + +LG ++ +D ++ + D G
Sbjct: 76 KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDG-- 133
Query: 233 SKAIEYDNFIECCL 246
I Y+ F++ +
Sbjct: 134 DGQINYEEFVKVMM 147
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 9/136 (6%)
Query: 117 IVACFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQV 176
I F L D +N G +D EL+ A+ + R + L+ + + + +F V
Sbjct: 25 IYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIV 84
Query: 177 FHS-------LQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKT 229
L + F+ D D +GKI LR LG ++ L ++ +FD
Sbjct: 85 MGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLD 144
Query: 230 GGKSKAIEYDNFIECC 245
G I + FI C
Sbjct: 145 G--DGEINENEFIAIC 158
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 13 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 72
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 73 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 130
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 131 DGQVNYEEFVQMM 143
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 9/135 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I +EL + S Q+ + +R +M + EF+ +
Sbjct: 15 AFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMAR 74
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
+ + R F D+D +G + + ELR + LG +S +D ++ D G
Sbjct: 75 KMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDG-- 132
Query: 233 SKAIEYDNFIECCLT 247
+ Y+ F+ ++
Sbjct: 133 DGQVNYEEFVRVLVS 147
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 35.4 bits (80), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 11 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 70
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 71 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 128
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 129 DGQVNYEEFVQMM 141
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 75
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDG-- 133
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 134 DGQVNYEEFVQMM 146
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 75
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDG-- 133
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 134 DGQVNYEEFVQMM 146
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 75 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDG-- 132
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 133 DGQVNYEEFVQMM 145
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 75 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 132
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 133 DGQVNYEEFVQMM 145
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 12 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 71
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 72 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 129
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 130 DGQVNYEEFVQMM 142
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 181 QNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDN 240
Q R F+ D D +G ID EL+ A+ +LGF + ++++ DK G + + + +
Sbjct: 6 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEG--TGKMNFGD 63
Query: 241 FIECCLTVKGLTEKFKERDT 260
F LTV +T+K E+DT
Sbjct: 64 F----LTV--MTQKMSEKDT 77
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 7/122 (5%)
Query: 116 NIVACFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQ 175
I F L D D +G ID KEL+ A+ + ++ ++ K+ +F+
Sbjct: 7 EIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLT 66
Query: 176 VFHSLQNWRAMFEKV-------DRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDK 228
V + + E++ D D +GKI L+ LG ++ L ++ + D+
Sbjct: 67 VMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADR 126
Query: 229 TG 230
G
Sbjct: 127 DG 128
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 13 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 72
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 73 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 130
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 131 DGQVNYEEFVQMM 143
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 35.0 bits (79), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 13 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 72
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 73 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 130
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 131 DGQVNYEEFVQMM 143
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 35.0 bits (79), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 19 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 78
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 79 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 136
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 137 DGQVNYEEFVQMM 149
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 35.0 bits (79), Expect = 0.046, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 184 RAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIE 243
+ F+ D+D++G I ++ELR +++LG ++ ++ ++ + D G + Y+ F++
Sbjct: 12 KEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDG--DGQVNYEEFVK 69
Query: 244 CCLTVK 249
+TV+
Sbjct: 70 MMMTVR 75
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 35.0 bits (79), Expect = 0.046, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 184 RAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIE 243
+ F+ D+D++G I ++ELR +++LG ++ ++ ++ + D G + Y+ F++
Sbjct: 7 KEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDG--DGQVNYEEFVK 64
Query: 244 CCLTVK 249
+TV+
Sbjct: 65 MMMTVR 70
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 17 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 76
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 77 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 134
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 135 DGQVNYEEFVQMM 147
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 75
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 133
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 134 DGQVNYEEFVQMM 146
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 35.0 bits (79), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMAR 74
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 75 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 132
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 133 DGQVNYEEFVQMM 145
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 35.0 bits (79), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 12/144 (8%)
Query: 113 TDPNIVA---CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIG 169
TD I F L D+D G I KEL + S Q+ + ++ ++ I
Sbjct: 2 TDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 61
Query: 170 PKEFIQVF-------HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLL 222
EF+ + S + + F D+D +G I + ELR + +LG ++ +D +
Sbjct: 62 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 121
Query: 223 VTKFDKTGGKSKAIEYDNFIECCL 246
+ + D G + Y+ F++ +
Sbjct: 122 IREADVDG--DGQVNYEEFVQVMM 143
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 35.0 bits (79), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 75
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 133
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 134 DGQVNYEEFVQMM 146
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 35.0 bits (79), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 14 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 73
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 74 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 131
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 132 DGQVNYEEFVQMM 144
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 35.0 bits (79), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 12/144 (8%)
Query: 113 TDPNIVA---CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIG 169
TD I F L D+D G I KEL + S Q+ + ++ ++ I
Sbjct: 5 TDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 170 PKEFIQVF-------HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLL 222
EF+ + S + + F D+D +G I + ELR + +LG ++ +D +
Sbjct: 65 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 124
Query: 223 VTKFDKTGGKSKAIEYDNFIECCL 246
+ + D G + Y+ F++ +
Sbjct: 125 IREADVDG--DGQVNYEEFVQVMM 146
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 21 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 80
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 81 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 138
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 139 DGQVNYEEFVQMM 151
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 75 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 132
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 133 DGQVNYEEFVQMM 145
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 180 LQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYD 239
+Q F ++DRD S +D++E R+ L LG + + + K+D+ G S ++ +
Sbjct: 36 IQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNG--SGTLDLE 93
Query: 240 NFI 242
F+
Sbjct: 94 EFL 96
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 12/144 (8%)
Query: 113 TDPNIVA---CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIG 169
TD I F L D+D G I KEL + S Q+ + ++ ++ I
Sbjct: 5 TDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 170 PKEFIQVF-------HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLL 222
EF+ + S + + F D+D +G I + ELR + +LG ++ +D +
Sbjct: 65 FPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 124
Query: 223 VTKFDKTGGKSKAIEYDNFIECCL 246
+ + D G + Y+ F++ +
Sbjct: 125 IREADVDG--DGQVNYEEFVQVMM 146
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 34.7 bits (78), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 75
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 133
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 134 DGQVNYEEFVQMM 146
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 34.7 bits (78), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 7/128 (5%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
Query: 178 ---HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSK 234
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 75 KMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG--DG 132
Query: 235 AIEYDNFI 242
+ Y+ F+
Sbjct: 133 QVNYEEFV 140
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 34.7 bits (78), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 178 HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTK 225
H +Q ++ F+ +D+D+ G I N++R SLG + LD +V +
Sbjct: 54 HQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAE 101
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 34.3 bits (77), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 181 QNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTG 230
Q R F+ D D +G ID EL+ A+ +LGF + ++++ DK G
Sbjct: 31 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEG 80
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 34.3 bits (77), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 10/137 (7%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 75 KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 132
Query: 233 SKAIEYDNFIECCLTVK 249
+ Y+ F+ +T K
Sbjct: 133 DGQVNYEEFV-TMMTAK 148
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 34.3 bits (77), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 9/135 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 75
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 133
Query: 233 SKAIEYDNFIECCLT 247
+ Y+ F+ T
Sbjct: 134 DGQVNYEEFVTMMTT 148
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 75
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 133
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 134 DGQVNYEEFVQMM 146
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 9/130 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 75 KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 132
Query: 233 SKAIEYDNFI 242
+ Y+ F+
Sbjct: 133 DGQVNYEEFV 142
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 9/130 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 75
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-- 133
Query: 233 SKAIEYDNFI 242
+ Y+ F+
Sbjct: 134 DGQVNYEEFV 143
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 33/77 (42%)
Query: 105 MPSTFPPGTDPNIVACFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTN 164
M ++ + CF++ DR+ G ID +EL + + + + LM N
Sbjct: 83 MKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNN 142
Query: 165 ARKIGPKEFIQVFHSLQ 181
+I EF+++ +Q
Sbjct: 143 DGRIDFDEFLKMMEGVQ 159
Score = 28.1 bits (61), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 56/141 (39%), Gaps = 12/141 (8%)
Query: 119 ACFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF- 177
A F + D D G I KEL + Q+ + + ++ + I +EF+ +
Sbjct: 21 AAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV 80
Query: 178 ---------HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDK 228
S + F DR+ G ID+ EL E + G V+ ++ L+ DK
Sbjct: 81 RQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDK 140
Query: 229 TGGKSKAIEYDNFIECCLTVK 249
I++D F++ V+
Sbjct: 141 N--NDGRIDFDEFLKMMEGVQ 159
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 9/130 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 75
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDG-- 133
Query: 233 SKAIEYDNFI 242
+ Y+ F+
Sbjct: 134 DGQVNYEEFV 143
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 9/135 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 15 AFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMAR 74
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + F+ DRD +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 75 KMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDG-- 132
Query: 233 SKAIEYDNFIECCLT 247
I Y+ F+ ++
Sbjct: 133 DGHINYEEFVRMMVS 147
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 9/135 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 15 AFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMAR 74
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + F+ DRD +G I + ELR + +LG ++ +D ++ + D G
Sbjct: 75 KMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDG-- 132
Query: 233 SKAIEYDNFIECCLT 247
I Y+ F+ ++
Sbjct: 133 DGHINYEEFVRMMVS 147
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Query: 124 ADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFH----S 179
D D +G I+ E S + F + N+ KI E +F
Sbjct: 391 VDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATIFGVSDVD 450
Query: 180 LQNWRAMFEKVDRDRSGKIDSNELREALMSL 210
+ W+++ +VD++ G++D +E ++ L+ L
Sbjct: 451 SETWKSVLSEVDKNNDGEVDFDEFQQXLLKL 481
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYN---QSFSLRTVRLLMYTFTNTNARKIGPKEFIQV 176
F+ D D SG +D++EL+ L + + + + LM N KIG +EF ++
Sbjct: 47 VFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEFQEM 106
Query: 177 FHS 179
HS
Sbjct: 107 VHS 109
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 9/125 (7%)
Query: 125 DRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF------- 177
D++ +G I +EL + + Q+ + ++ L+ N N ++ EF +
Sbjct: 20 DKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRET 79
Query: 178 HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIE 237
+ + R F+ DRD G I ELR +++LG V+ +D ++ + D G I
Sbjct: 80 DTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDG--DGMIN 137
Query: 238 YDNFI 242
Y+ F+
Sbjct: 138 YEEFV 142
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 33.1 bits (74), Expect = 0.16, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 186 MFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECC 245
+F++ D + GKI S+EL +AL +LG +V+P + ++ + D G I +D F +
Sbjct: 16 IFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDG--DGFISFDEFTDFA 72
Query: 246 LTVKGLTE 253
+GL +
Sbjct: 73 RANRGLVK 80
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 115 PNIVACFQLADRDNSGLIDDKELQGAL---SSYNQSFSLRTVRLLMYTFTNTNARKIGPK 171
++ F + D+D G ID+ EL L SS + S + + LM KIG +
Sbjct: 41 DDVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVE 100
Query: 172 EF 173
EF
Sbjct: 101 EF 102
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Query: 124 ADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFH----S 179
D D +G I+ E S + F + N+ KI E +F
Sbjct: 415 VDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDVD 474
Query: 180 LQNWRAMFEKVDRDRSGKIDSNELREALMSL 210
+ W+++ +VD++ G++D +E ++ L+ L
Sbjct: 475 SETWKSVLSEVDKNNDGEVDFDEFQQMLLKL 505
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Query: 124 ADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFH----S 179
D D +G I+ E S + F + N+ KI E +F
Sbjct: 414 VDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDVD 473
Query: 180 LQNWRAMFEKVDRDRSGKIDSNELREALMSL 210
+ W+++ +VD++ G++D +E ++ L+ L
Sbjct: 474 SETWKSVLSEVDKNNDGEVDFDEFQQMLLKL 504
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F D+D +G I + ELR + +LG ++ +D ++ + + G
Sbjct: 75 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDG-- 132
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 133 DGQVNYEEFVQMM 145
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Query: 124 ADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFH----S 179
D D +G I+ E S + F + N+ KI E +F
Sbjct: 391 VDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDVD 450
Query: 180 LQNWRAMFEKVDRDRSGKIDSNELREALMSL 210
+ W+++ +VD++ G++D +E ++ L+ L
Sbjct: 451 SETWKSVLSEVDKNNDGEVDFDEFQQMLLKL 481
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 7/120 (5%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+DNSG I EL + S S S V LM I EF+ +
Sbjct: 16 AFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSR 75
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S Q F+ D++ G I + EL+ L S+G ++ +D ++ + G+
Sbjct: 76 QLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVSDGSGE 135
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 180 LQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYD 239
+ ++ F D+D SG I ++EL + SLG + S + L+ + D G + AIE+
Sbjct: 10 IAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG--NHAIEFS 67
Query: 240 NF-------IECCLTVKGLTEKFKERDTTYSG 264
F ++C + + L E FK D G
Sbjct: 68 EFLALMSRQLKCNDSEQELLEAFKVFDKNGDG 99
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 32.3 bits (72), Expect = 0.29, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 180 LQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYD 239
+ ++ F D+D +G I S+EL + SLG + S ++ L+ + D G + IE+
Sbjct: 9 IAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDG--NHQIEFS 66
Query: 240 NFI 242
F+
Sbjct: 67 EFL 69
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 10/137 (7%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHS 179
F++ D DNSG I EL+ L ++ LM + I EFI
Sbjct: 15 LFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVH 74
Query: 180 L------QNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKS 233
L +N + F D+D SG I +E+++A F + + +D ++ + D+
Sbjct: 75 LNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKD--FGLDDIHIDDMIKEIDQD--ND 130
Query: 234 KAIEYDNFIECCLTVKG 250
I+Y F KG
Sbjct: 131 GQIDYGEFAAMMRKRKG 147
Score = 27.7 bits (60), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 178 HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAV-SPVVLDLL-VTKFDKTGGKSKA 235
+ + +F+ +D D SG I +EL++ L +G + + DL+ DK+G
Sbjct: 7 EEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSG----T 62
Query: 236 IEYDNFIECCLTVKGL 251
I+Y FI + + L
Sbjct: 63 IDYGEFIAATVHLNKL 78
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 7/120 (5%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+DN+G I EL + S S S V LM +I EF+ +
Sbjct: 15 AFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR 74
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S Q F+ D++ G I + EL+ L S+G ++ +D ++ + G+
Sbjct: 75 QLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVSDGSGE 134
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 183 WRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFI 242
++ F D+D +G I S+EL + SLG + S ++ L+ + D G + IE+ F+
Sbjct: 12 FKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDG--NHQIEFSEFL 69
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 16/136 (11%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFH- 178
F L DR +G I + L + Q+ +L + + T ++ ++F+QV +
Sbjct: 10 AFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTL----PAEVDMEQFLQVLNR 65
Query: 179 --------SLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTG 230
+ + F+ D+D +G I ELR L SLG +S +D L+
Sbjct: 66 PNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVKD 125
Query: 231 GKSKAIEYDNFIECCL 246
G + Y +F++ L
Sbjct: 126 G---MVNYHDFVQMIL 138
Score = 28.1 bits (61), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 111 PGTDPNIVACFQLADRDNSGLIDDKELQGALSSYNQSFS 149
PG V FQ+ D+D +G+I EL+ L+S + S
Sbjct: 72 PGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLS 110
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Query: 123 LADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHS--- 179
L D D SG I+ E + S + F + KI KE ++F
Sbjct: 389 LLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADS 448
Query: 180 ---LQNWRAMFEKVDRDRSGKIDSNELREAL 207
++ ++ E+VD ++ G++D NE E L
Sbjct: 449 SIQMEELESIIEQVDNNKDGEVDFNEFVEML 479
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 121 FQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSL 180
F++ D+D SG I KEL S + S + + ++ N ++ EF+++ L
Sbjct: 423 FKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEM---L 479
Query: 181 QNW 183
QN+
Sbjct: 480 QNF 482
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 22/32 (68%)
Query: 180 LQNWRAMFEKVDRDRSGKIDSNELREALMSLG 211
+Q+++ F +D++R G ID ++LRE ++G
Sbjct: 11 IQDFKEAFTVIDQNRDGIIDKDDLRETFAAMG 42
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 178 HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIE 237
++ R F + D+D+ G I+ +L + ++G+ + + L L + + G ++
Sbjct: 22 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH--VD 79
Query: 238 YDNFIEC-----------CLTVKGLTEKFKERDTTYSGSAT 267
+D+F+E + VK L + F+E DT G +
Sbjct: 80 FDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEIS 120
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 178 HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIE 237
++ R F + D+D+ G I+ +L + ++G+ + + L L + + G ++
Sbjct: 8 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH--VD 65
Query: 238 YDNFIEC-----------CLTVKGLTEKFKERDTTYSGSAT 267
+D+F+E + VK L + F+E DT G +
Sbjct: 66 FDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEIS 106
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 7/108 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+DN+G I EL + S S S V LM +I EF+ +
Sbjct: 15 AFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR 74
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLD 220
S Q F+ D++ G I + EL+ L S+G ++ L+
Sbjct: 75 QLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 183 WRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFI 242
++ F D+D +G I S+EL + SLG + S ++ L+ + D G IE+ F+
Sbjct: 12 FKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ--IEFSEFL 69
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 31.6 bits (70), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 178 HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIE 237
++ R F + D+D+ G I+ +L + ++G+ + + L L + + G ++
Sbjct: 8 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH--VD 65
Query: 238 YDNFIEC-----------CLTVKGLTEKFKERDTTYSGSAT 267
+D+F+E + VK L + F+E DT G +
Sbjct: 66 FDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEIS 106
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 31.6 bits (70), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 7/120 (5%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+DN+G I EL + S S S V LM +I EF+ +
Sbjct: 16 AFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR 75
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S Q F+ D++ G I + EL+ L S+G ++ +D ++ + G+
Sbjct: 76 QLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVSDGSGE 135
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 183 WRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFI 242
++ F D+D +G I S+EL + SLG + S ++ L+ + D G + IE+ F+
Sbjct: 13 FKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDG--NHQIEFSEFL 70
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 31.6 bits (70), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 8/132 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFH- 178
F L D+D G I KEL + S Q+ + ++ ++ I EF+ +
Sbjct: 11 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 70
Query: 179 -----SLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKS 233
+ R F D+D +G I + ELR + +LG ++ +D ++ + + G
Sbjct: 71 KMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDG--D 128
Query: 234 KAIEYDNFIECC 245
+ Y+ F++
Sbjct: 129 GQVNYEEFVQMM 140
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 50/136 (36%), Gaps = 9/136 (6%)
Query: 117 IVACFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQV 176
I F L D +N G +D EL+ A + R + L+ + + +F V
Sbjct: 25 IYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKYDDFYIV 84
Query: 177 FHS-------LQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKT 229
L + F+ D D +GKI LR LG ++ L + +FD
Sbjct: 85 XGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLD 144
Query: 230 GGKSKAIEYDNFIECC 245
G I + FI C
Sbjct: 145 G--DGEINENEFIAIC 158
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 30.8 bits (68), Expect = 0.80, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 179 SLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEY 238
S + + F D+D++G I + ELR + +LG ++ +D ++ + D G I Y
Sbjct: 2 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDG--DGQINY 59
Query: 239 DNFIE 243
+ F++
Sbjct: 60 EEFVK 64
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 30.8 bits (68), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 180 LQNWRAMFEKVDRDRSGKIDSNELREALMSLG 211
+Q + F +D++R G ID N+L+E SLG
Sbjct: 1 MQEMKEAFTMIDQNRDGFIDINDLKEEFSSLG 32
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 30.8 bits (68), Expect = 0.90, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 179 SLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEY 238
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G + Y
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG--DGQVNY 60
Query: 239 DNFIE 243
+ F++
Sbjct: 61 EEFVQ 65
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 30.8 bits (68), Expect = 0.90, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 179 SLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEY 238
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G + Y
Sbjct: 7 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG--DGQVNY 64
Query: 239 DNFIE 243
+ F++
Sbjct: 65 EEFVQ 69
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 30.8 bits (68), Expect = 0.90, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 179 SLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEY 238
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G + Y
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG--DGQVNY 60
Query: 239 DNFIE 243
+ F++
Sbjct: 61 EEFVQ 65
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 30.8 bits (68), Expect = 0.90, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 179 SLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEY 238
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G + Y
Sbjct: 6 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG--DGQVNY 63
Query: 239 DNFIE 243
+ F++
Sbjct: 64 EEFVQ 68
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 30.8 bits (68), Expect = 0.90, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 179 SLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEY 238
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G + Y
Sbjct: 4 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG--DGQVNY 61
Query: 239 DNFIE 243
+ F++
Sbjct: 62 EEFVQ 66
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 30.8 bits (68), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 178 HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLG 211
+Q + F +D++R G ID N+L+E SLG
Sbjct: 16 KQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLG 49
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 30.8 bits (68), Expect = 0.92, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 184 RAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIE 243
R F D+D +G I + ELR + +LG ++ +D ++ + D G + Y+ F++
Sbjct: 5 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG--DGQVNYEEFVQ 62
>pdb|3PST|A Chain A, Crystal Structure Of Pul And Pfu(Mutate) Domain
Length = 425
Score = 30.8 bits (68), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 137 LQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRD--R 194
++ L + N + ++ TVR+L+ F N N +++ S Q ++++FE +D + +
Sbjct: 267 IEEGLGNKNITLTMLTVRILVNCFNNENWG-------VKLLESNQVYKSIFETIDTEFSQ 319
Query: 195 SGKIDSNELREALMSLGFAVS-------------PVVLDLLVTKF 226
+ S L A+ +L F S P+V D + TK+
Sbjct: 320 ASAKQSQNLAIAVSTLIFNYSALVTKGNSDLELLPIVADAINTKY 364
>pdb|3PSP|A Chain A, Crystal Structure Of Pul And Pfu Domain
Length = 425
Score = 30.8 bits (68), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 137 LQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRD--R 194
++ L + N + ++ TVR+L+ F N N +++ S Q ++++FE +D + +
Sbjct: 267 IEEGLGNKNITLTMLTVRILVNCFNNENWG-------VKLLESNQVYKSIFETIDTEFSQ 319
Query: 195 SGKIDSNELREALMSLGFAVS-------------PVVLDLLVTKF 226
+ S L A+ +L F S P+V D + TK+
Sbjct: 320 ASAKQSQNLAIAVSTLIFNYSALVTKGNSDLELLPIVADAINTKY 364
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 4/94 (4%)
Query: 114 DPNIVACFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEF 173
+ I+ Q AD DNSG ID KE A N+ + F + I P E
Sbjct: 62 ESEILDLXQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDEL 121
Query: 174 IQVFHS--LQNWR--AMFEKVDRDRSGKIDSNEL 203
Q +++ R + VD+D G+ID NE
Sbjct: 122 QQACEEFGVEDVRIEELXRDVDQDNDGRIDYNEF 155
Score = 28.1 bits (61), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 13/95 (13%)
Query: 178 HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPV-VLDLL-VTKFDKTGGKSKA 235
+ + F +D D+SG+I EL+ L +G + +LDL D +G
Sbjct: 24 EEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSG----T 79
Query: 236 IEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTY 270
I+Y FI L + K + D + A FTY
Sbjct: 80 IDYKEFIAATLHLN----KIEREDHLF---AAFTY 107
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 180 LQNWRAMFEKVDRDRSGKIDSNELREALMSLG 211
+Q + F +D++R G ID N+L+E SLG
Sbjct: 22 MQEMKEAFTMIDQNRDGFIDINDLKEMFSSLG 53
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 180 LQNWRAMFEKVDRDRSGKIDSNELREALMSLG 211
+Q + F +D++R G ID N+L+E SLG
Sbjct: 22 MQEMKEAFTMIDQNRDGFIDINDLKEMFSSLG 53
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 30.0 bits (66), Expect = 1.3, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 166 RKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTK 225
R + P+E ++ R F + D+D+ G I+ +L + ++G+ + + L L +
Sbjct: 2 RSLRPEE-------IEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQ 54
Query: 226 FDKTGGKSKAIEYDNFIE 243
+ G +++D+F+E
Sbjct: 55 INMNLGGH--VDFDDFVE 70
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 30.0 bits (66), Expect = 1.4, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 186 MFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECC 245
+F++ D + GKI +EL +AL +LG + S + ++ + D G I+++ FI C
Sbjct: 8 IFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDG--DGFIDFNEFISFC 64
Query: 246 LTVKGLTE 253
GL +
Sbjct: 65 NANPGLMK 72
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 30.0 bits (66), Expect = 1.4, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 186 MFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECC 245
+F++ D + GKI +EL +AL +LG + S + ++ + D G I+++ FI C
Sbjct: 7 IFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDG--DGFIDFNEFISFC 63
Query: 246 LTVKGLTE 253
GL +
Sbjct: 64 NANPGLMK 71
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 30.0 bits (66), Expect = 1.4, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 179 SLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEY 238
S + R F D+D +G I + ELR + +LG ++ +D ++ + D G + Y
Sbjct: 27 SEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG--DGQVNY 84
Query: 239 DNFIE 243
+ F++
Sbjct: 85 EEFVQ 89
>pdb|3FQG|A Chain A, Crystal Structure Of The S. Pombe Rai1
Length = 360
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 101 FASLMPSTFPPGTDPNIVACFQLADRDNSGLIDDKEL 137
F + P+ PP ++P +AC+ L+ RD L+DD +L
Sbjct: 7 FYDVPPAHVPPVSEPLEIACYSLS-RDRELLLDDSKL 42
>pdb|3FQD|B Chain B, Crystal Structure Of The S. Pombe Rat1-Rai1 Complex
Length = 352
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 101 FASLMPSTFPPGTDPNIVACFQLADRDNSGLIDDKEL 137
F + P+ PP ++P +AC+ L+ RD L+DD +L
Sbjct: 7 FYDVPPAHVPPVSEPLEIACYSLS-RDRELLLDDSKL 42
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 30.0 bits (66), Expect = 1.5, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 179 SLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEY 238
S + R F D+D +G I + +LR + +LG ++ +D ++ + D G + Y
Sbjct: 5 SEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDG--DGQVNY 62
Query: 239 DNFIE 243
++F++
Sbjct: 63 EDFVQ 67
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 30.0 bits (66), Expect = 1.5, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 180 LQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFD 227
L++ + F D+D G I +ELR A+ LG + LD ++ + D
Sbjct: 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREAD 52
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 30.0 bits (66), Expect = 1.6, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 187 FEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFI 242
F+ DRD +G I + ELR + +LG ++ +D ++ + D G I Y+ F+
Sbjct: 14 FKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDG--DGHINYEEFV 67
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 12/141 (8%)
Query: 119 ACFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF- 177
A F + D D G I KEL + Q+ + + ++ + I +EF+ +
Sbjct: 21 AAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV 80
Query: 178 ---------HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDK 228
S + +F DR+ G ID+ EL E + G V+ ++ L+ DK
Sbjct: 81 RQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDK 140
Query: 229 TGGKSKAIEYDNFIECCLTVK 249
I++D F++ V+
Sbjct: 141 N--NDGRIDFDEFLKMMEGVQ 159
>pdb|3GAE|A Chain A, Crystal Structure Of Pul
pdb|3GAE|B Chain B, Crystal Structure Of Pul
Length = 253
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 137 LQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRD--R 194
++ L + N + ++ TVR+L+ F N N +++ S Q ++++FE +D + +
Sbjct: 95 IEEGLGNKNITLTMLTVRILVNCFNNENWG-------VKLLESNQVYKSIFETIDTEFSQ 147
Query: 195 SGKIDSNELREALMSLGFAVSPVV 218
+ S L A+ +L F S +V
Sbjct: 148 ASAKQSQNLAIAVSTLIFNYSALV 171
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 29.6 bits (65), Expect = 1.9, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 186 MFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIE 243
+F D++ G ID +EL+ L + G ++ ++ L+ DK I+YD F+E
Sbjct: 11 LFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKN--NDGRIDYDEFLE 66
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 29.6 bits (65), Expect = 2.1, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 184 RAMFEKVDRDRSGKIDSNELREALMSLGFAV-SPVVLDLL-VTKFDKTGGKSKAIEYDNF 241
+ +F+ +D D SG I +EL++ L +G + + DL+ DK+G I+Y F
Sbjct: 26 KELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSG----TIDYGEF 81
Query: 242 I 242
I
Sbjct: 82 I 82
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 180 LQNWRAMFEKVDRDRSGKIDSNELREALMSLG 211
+Q ++ F +D++R G ID +L + L S+G
Sbjct: 6 IQEFKEAFNMIDQNRDGFIDKEDLHDMLASMG 37
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 29.3 bits (64), Expect = 2.3, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 186 MFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTG 230
+F++ D + GKI + EL EAL +LG +++P + ++ + D G
Sbjct: 14 IFKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDG 57
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 41/102 (40%), Gaps = 13/102 (12%)
Query: 159 TFTNTNARKIGPK-----EFIQVFHSLQN--------WRAMFEKVDRDRSGKIDSNELRE 205
F K+G K EF+ + L + + F+ DR+ G I ELR
Sbjct: 50 VFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRH 109
Query: 206 ALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLT 247
L LG +S +D ++ D ++Y+ F++ +T
Sbjct: 110 VLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFVKKVMT 151
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 41/102 (40%), Gaps = 13/102 (12%)
Query: 159 TFTNTNARKIGPK-----EFIQVFHSLQN--------WRAMFEKVDRDRSGKIDSNELRE 205
F K+G K EF+ + L + + F+ DR+ G I ELR
Sbjct: 49 VFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRH 108
Query: 206 ALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLT 247
L LG +S +D ++ D ++Y+ F++ +T
Sbjct: 109 VLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFVKKVMT 150
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 29.3 bits (64), Expect = 2.8, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 187 FEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLV--TKFDKTGGKSKAIEYDNFIE 243
F+ D++ +GK+ +LR L LG ++ +D L+ + D G I+Y FIE
Sbjct: 11 FQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNG----EIDYKKFIE 65
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 29.3 bits (64), Expect = 2.9, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 186 MFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIE 243
+F D++ G ID EL+ L + G ++ ++ L+ DK I+YD F+E
Sbjct: 10 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKN--NDGRIDYDEFLE 65
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 29.3 bits (64), Expect = 2.9, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 186 MFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIE 243
+F D++ G ID EL+ L + G ++ ++ L+ DK I+YD F+E
Sbjct: 12 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKN--NDGRIDYDEFLE 67
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 29.3 bits (64), Expect = 2.9, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 186 MFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIE 243
+F D++ G ID EL+ L + G ++ ++ L+ DK I+YD F+E
Sbjct: 20 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKN--NDGRIDYDEFLE 75
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 29.3 bits (64), Expect = 2.9, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 186 MFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIE 243
+F D++ G ID EL+ L + G ++ ++ L+ DK I+YD F+E
Sbjct: 15 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKN--NDGRIDYDEFLE 70
>pdb|3L3F|X Chain X, Crystal Structure Of A Pfu-Pul Domain Pair Of
Saccharomyces Cerevisiae Doa1UFD3
Length = 362
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 137 LQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRD--R 194
++ L + N + + TVR+L+ F N N +++ S Q ++++FE +D + +
Sbjct: 204 IEEGLGNKNITLTXLTVRILVNCFNNENWG-------VKLLESNQVYKSIFETIDTEFSQ 256
Query: 195 SGKIDSNELREALMSLGFAVSPVV 218
+ S L A+ +L F S +V
Sbjct: 257 ASAKQSQNLAIAVSTLIFNYSALV 280
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 28.9 bits (63), Expect = 3.3, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 184 RAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKF----DKTG-GKSKAIEY 238
+ +FEK D+++ GK+ +E RE + A SP + KF D G G+ A E+
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFRE----VALAFSPYFTQEDIVKFFEEIDVDGNGELNADEF 59
Query: 239 DNFIE 243
+ IE
Sbjct: 60 TSCIE 64
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 159 TFTNTNARKIGPK-----EFIQVFHSLQN--------WRAMFEKVDRDRSGKIDSNELRE 205
F K+G K EF+ + L + + F+ DR+ G I ELR
Sbjct: 49 VFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRH 108
Query: 206 ALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFI 242
L +LG +S +D ++ D ++Y++F+
Sbjct: 109 VLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 145
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 159 TFTNTNARKIGPK-----EFIQVFHSLQN--------WRAMFEKVDRDRSGKIDSNELRE 205
F K+G K EF+ + L + + F+ DR+ G I ELR
Sbjct: 49 VFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRH 108
Query: 206 ALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFI 242
L +LG +S +D ++ D ++Y++F+
Sbjct: 109 VLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 145
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 15/134 (11%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL S Q+ T L +A G +F +
Sbjct: 16 AFSLFDKDGDGTITTKELGTVXRSLGQN---PTEAELQDXINEVDADGNGTIDFPEFLTX 72
Query: 178 --------HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKT 229
S + R F D+D +G I + ELR +LG ++ +D + + D
Sbjct: 73 XARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADID 132
Query: 230 GGKSKAIEYDNFIE 243
G + Y+ F++
Sbjct: 133 G--DGQVNYEEFVQ 144
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 159 TFTNTNARKIGPK-----EFIQVFHSLQN--------WRAMFEKVDRDRSGKIDSNELRE 205
F K+G K EF+ + L + + F+ DR+ G I ELR
Sbjct: 47 VFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRH 106
Query: 206 ALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFI 242
L +LG +S +D ++ D ++Y++F+
Sbjct: 107 VLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 143
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 55/139 (39%), Gaps = 33/139 (23%)
Query: 125 DRDNSGLIDDKELQGALSSYNQSFSLRTVRL--LMYTFTNTNAR----KIGPKEFIQVFH 178
D D SG ++ KELQ + Q+ + L M TF + + KIG E V
Sbjct: 26 DADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLP 85
Query: 179 SLQNWRAMFE---------------KVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLV 223
+ +N+ +F K D D SG I++ EL+ L L+
Sbjct: 86 TEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKD------------LL 133
Query: 224 TKFDKTGGKSKAIEYDNFI 242
K +KT +K EY + +
Sbjct: 134 EKANKTVDDTKLAEYTDLM 152
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 181 QNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLV--TKFDKTGGKSKAIEY 238
+++ F+ D++ +GK+ +LR L LG ++ +D L+ + D G I+Y
Sbjct: 83 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNG----EIDY 138
Query: 239 DNFIECCL 246
FIE L
Sbjct: 139 KKFIEDVL 146
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 159 TFTNTNARKIGPK-----EFIQVFHSLQN--------WRAMFEKVDRDRSGKIDSNELRE 205
F K+G K EF+ + L + + F+ DR+ G I ELR
Sbjct: 49 VFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRH 108
Query: 206 ALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFI 242
L +LG +S +D ++ D ++Y++F+
Sbjct: 109 VLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 145
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 159 TFTNTNARKIGPK-----EFIQVFHSLQN--------WRAMFEKVDRDRSGKIDSNELRE 205
F K+G K EF+ + L + + F+ DR+ G I ELR
Sbjct: 46 VFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRH 105
Query: 206 ALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFI 242
L +LG +S +D ++ D ++Y++F+
Sbjct: 106 VLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 142
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 15/134 (11%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I KEL S Q+ T L +A G +F +
Sbjct: 15 AFSLFDKDGDGTITTKELGTVXRSLGQN---PTEAELQDXINEVDADGNGTIDFPEFLTX 71
Query: 178 --------HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKT 229
S + R F D+D +G I + ELR +LG ++ +D + + D
Sbjct: 72 XARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADID 131
Query: 230 GGKSKAIEYDNFIE 243
G + Y+ F++
Sbjct: 132 G--DGQVNYEEFVQ 143
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 180 LQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTG 230
+ ++ FE D +R+G I L+ L G V P + + + D TG
Sbjct: 5 VSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATG 55
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 28.1 bits (61), Expect = 5.0, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 117 IVACFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQV 176
I+ F+L D DNSG I K+L+ ++ + ++ ++ + +I EFI++
Sbjct: 11 ILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRI 70
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 28.1 bits (61), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 159 TFTNTNARKIGPK-----EFIQVFHSLQN--------WRAMFEKVDRDRSGKIDSNELRE 205
F K+G K EF+ + L + + F+ DR+ G I ELR
Sbjct: 46 VFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRH 105
Query: 206 ALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFI 242
L +LG +S +D ++ D ++Y++F+
Sbjct: 106 VLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 142
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 181 QNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDN 240
+++ F D++ +GK+ ELR L +LG ++ ++ ++ + + G I Y+
Sbjct: 87 EDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHEDSNG---CINYEA 143
Query: 241 FIECCLTV 248
F++ L+V
Sbjct: 144 FLKHILSV 151
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 27.7 bits (60), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 13/97 (13%)
Query: 159 TFTNTNARKIGPK-----EFIQVFHSLQN--------WRAMFEKVDRDRSGKIDSNELRE 205
F K+G K EF+ + L + + F+ DR+ G I ELR
Sbjct: 49 VFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRH 108
Query: 206 ALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFI 242
L LG +S +D ++ D ++Y+ F+
Sbjct: 109 VLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFV 145
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 27.7 bits (60), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 116 NIVACFQLADRDNSGLIDDKELQGALSSYNQSFSLRT---VRLLMYTFTNTNARKIGPKE 172
I F + D+D SG I+++ELQ L +++ S + T + + KIG +E
Sbjct: 43 QIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEE 102
Query: 173 F 173
F
Sbjct: 103 F 103
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 27.7 bits (60), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 116 NIVACFQLADRDNSGLIDDKELQGALSSYNQSFSLRT---VRLLMYTFTNTNARKIGPKE 172
I F + D+D SG I+++ELQ L +++ S + T + + KIG +E
Sbjct: 42 QIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEE 101
Query: 173 F 173
F
Sbjct: 102 F 102
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 27.3 bits (59), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/133 (19%), Positives = 55/133 (41%), Gaps = 9/133 (6%)
Query: 120 CFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVF-- 177
F L D+D G I K+L + S Q+ + ++ ++ I +F+ +
Sbjct: 316 AFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLTMMAR 375
Query: 178 -----HSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGK 232
S + R F +D +G I + +LR + +LG ++ +D ++ + G
Sbjct: 376 KMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDG-- 433
Query: 233 SKAIEYDNFIECC 245
+ Y+ F++
Sbjct: 434 DGQVNYEQFVQMM 446
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 27.3 bits (59), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 181 QNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTG-GKSKAIEYD 239
Q R F+ D D +G ID EL+ A +LGF + +++ DK G GK
Sbjct: 31 QEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKX------ 84
Query: 240 NFIECCLTVKGLTEKFKERDT 260
NF + LTV T+K E+DT
Sbjct: 85 NFGD-FLTV--XTQKXSEKDT 102
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,524,834
Number of Sequences: 62578
Number of extensions: 272652
Number of successful extensions: 1034
Number of sequences better than 100.0: 185
Number of HSP's better than 100.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 668
Number of HSP's gapped (non-prelim): 301
length of query: 283
length of database: 14,973,337
effective HSP length: 98
effective length of query: 185
effective length of database: 8,840,693
effective search space: 1635528205
effective search space used: 1635528205
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)