Query 023340
Match_columns 283
No_of_seqs 154 out of 324
Neff 3.7
Searched_HMMs 46136
Date Fri Mar 29 03:17:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023340.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023340hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05419 GUN4: GUN4-like ; In 100.0 2.4E-49 5.3E-54 332.5 10.9 125 97-239 1-132 (132)
2 PRK11718 anti-RNA polymerase s 70.0 12 0.00026 33.5 5.7 64 105-181 21-86 (161)
3 PF07624 PSD2: Protein of unkn 58.1 43 0.00094 25.6 6.2 59 90-162 5-63 (76)
4 PF04353 Rsd_AlgQ: Regulator o 52.8 14 0.0003 32.7 3.0 65 104-181 20-86 (153)
5 KOG0037 Ca2+-binding protein, 39.1 20 0.00043 33.6 1.9 46 89-136 71-116 (221)
6 COG5249 RER1 Golgi protein inv 37.9 13 0.00028 33.5 0.5 78 142-253 16-95 (180)
7 PF14276 DUF4363: Domain of un 32.1 65 0.0014 26.1 3.7 30 93-122 31-60 (121)
8 COG3889 Predicted solute bindi 31.2 32 0.00068 37.8 2.1 14 59-72 816-829 (872)
9 COG3160 Rsd Regulator of sigma 30.9 1.2E+02 0.0026 27.2 5.3 64 105-180 21-85 (162)
10 PF06933 SSP160: Special lobe- 28.9 37 0.00081 35.2 2.1 11 92-102 334-344 (756)
11 PF08047 His_leader: Histidine 26.3 25 0.00054 20.4 0.2 9 4-12 2-10 (16)
12 PTZ00184 calmodulin; Provision 26.0 2.7E+02 0.0058 21.7 6.2 46 90-137 62-107 (149)
13 PF11593 Med3: Mediator comple 24.6 1.2E+02 0.0025 30.8 4.6 11 230-240 321-334 (379)
14 KOG2196 Nuclear porin [Nuclear 20.9 3.6E+02 0.0079 26.0 6.9 32 88-121 67-98 (254)
15 PF14423 Imm5: Immunity protei 20.1 59 0.0013 29.7 1.4 11 211-221 12-22 (183)
No 1
>PF05419 GUN4: GUN4-like ; InterPro: IPR008629 In Arabidopsis, GUN4 is required for the functioning of the plastid mediated repression of nuclear transcription that is involved in controlling the levels of magnesium- protoporphyrin IX. GUN4 binds the product and substrate of Mg-chelatase, an enzyme that produces Mg-Proto, and activates Mg-chelatase. GUN4 is thought to participate in plastid-to-nucleus signalling by regulating magnesium-protoporphyrin IX synthesis or trafficking.; PDB: 1Y6I_A 1Z3X_A 1Z3Y_A.
Probab=100.00 E-value=2.4e-49 Score=332.51 Aligned_cols=125 Identities=38% Similarity=0.773 Sum_probs=100.4
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHHHhCcccccccccchhhhccCchHhHHHHHHHHhhhcCCCcchHHHHHHHHHhccc--
Q 023340 97 LHQHLQAQNFRQADEETRRLLIALAGEASEKRGYVFFSEVQFIAEADLKAIDELWRQYSDNKFGYSVQKKIWEKVNKD-- 174 (283)
Q Consensus 97 L~~LLaagkWkeAD~ET~~LmL~iagr~~~~~GyL~~~dI~nfPCeDLrtIDqLW~kYS~GkFGFSVQkqIw~~v~~d-- 174 (283)
|++||++|+|++||+||++|||++||+ +.+|||++++|++|||+||++||+||++||+||||||||++||+++++.
T Consensus 1 L~~lL~~~~W~~AD~eT~~lml~~ag~--~~~~~l~~~~i~~~pc~dL~~ID~LW~~yS~GrFGFSVQk~I~~~~g~~~~ 78 (132)
T PF05419_consen 1 LQDLLAQGKWKEADQETYRLMLKIAGR--EKRGWLDPEDIKNFPCEDLRTIDQLWVKYSNGRFGFSVQKQIWQSLGGTED 78 (132)
T ss_dssp HHHHHHTT-HHHHHHHHHHHHHHHH-C--CCHTS--HHHHCTS-HHHHHHHHHHHHHTTTT-SSHHHHHHHHHHTTT---
T ss_pred CHHHHhhCCHHHHHHHHHHHHHHHhCC--CcCCcCCHHHHHhCCHHHHHHHHHHHHHhCCCCcChHHHHHHHHHcCCccc
Confidence 899999999999999999999999998 4789999999999999999999999999999999999999999999986
Q ss_pred -----HHHHhhhhcccccCCchhhccccccCCcceeeccCCCCCCCCcCccccccHHHHHHHHhcCCCCC
Q 023340 175 -----FTNFFIRVGWMKKLDTEMEQYNYRAFPTEFIWENGKETPVGHLPLTNALRGTQLLASILNHPAFE 239 (283)
Q Consensus 175 -----~~~FgdrVGWrk~~d~e~~~~ny~~fp~ef~~~fsl~AP~GHLP~~~~lrG~qll~~l~~hpaf~ 239 (283)
|.+||++||||++++ |..| ++|+|++ +||+|||| +++++.++++||||+
T Consensus 79 ~~~~~~~~F~~~VGW~~~~~-------w~~y-~~l~f~l--~AP~GHLP------~~~~~~~~~~~~~~~ 132 (132)
T PF05419_consen 79 YDREIWEKFGDRVGWRKGGQ-------WLSY-SELTFSL--NAPKGHLP------AVWWLSSLLSHPAWQ 132 (132)
T ss_dssp -----HHHHHHHCT--CTTB--------SST-TTS--ST--TS-TT--S-------THHHHHHHTSCHHH
T ss_pred hhHHHHHHHHHhcCCCCCCc-------cccc-ccceecC--CCCCCCCc------cHHHHHHHHcCCCcC
Confidence 999999999998753 3334 5787655 69999999 678999999999985
No 2
>PRK11718 anti-RNA polymerase sigma 70 factor; Provisional
Probab=69.98 E-value=12 Score=33.51 Aligned_cols=64 Identities=20% Similarity=0.239 Sum_probs=44.4
Q ss_pred CHHHHHHHHHHHHHHHhCcccccccccchhhhccCc-hHhHHHHHHHHhhh-cCCCcchHHHHHHHHHhcccHHHHhhh
Q 023340 105 NFRQADEETRRLLIALAGEASEKRGYVFFSEVQFIA-EADLKAIDELWRQY-SDNKFGYSVQKKIWEKVNKDFTNFFIR 181 (283)
Q Consensus 105 kWkeAD~ET~~LmL~iagr~~~~~GyL~~~dI~nfP-CeDLrtIDqLW~kY-S~GkFGFSVQkqIw~~v~~d~~~Fgdr 181 (283)
+|-++-++---.-|+++|-... ++...+| -+.|+..-++.+.| |.||| +||+.+-+.+..|++.
T Consensus 21 ~WL~~Rq~LLV~Yc~L~gl~P~-------~~~~~~~~~~~l~~FC~~LVDYvSaGHF------eIYe~li~e~e~~~~~ 86 (161)
T PRK11718 21 RWLHERQQLLVAYCKLAGIKPG-------KESLSLPNEKALDDFCQLLVDYVSAGHF------EIYEQLVHEAEAFGDL 86 (161)
T ss_pred HHHHHHHHHHHHHHHHhcCCCC-------cccccCCCHHHHHHHHHHHHHHHcccch------HHHHHHHHHHHHhCch
Confidence 5777767666677788875210 1122333 34677777888888 99999 8999998888777775
No 3
>PF07624 PSD2: Protein of unknown function (DUF1585); InterPro: IPR011478 This entry represents a conserved region at the C terminus of a family of cytochrome-like proteins found in bacteria such as Rhodopirellula baltica and Solibacter usitatus. These proteins also contain IPR013036 from INTERPRO, IPR013039 from INTERPRO, IPR013042 from INTERPRO and IPR013043 from INTERPRO.
Probab=58.11 E-value=43 Score=25.56 Aligned_cols=59 Identities=19% Similarity=0.138 Sum_probs=46.5
Q ss_pred CCCChHHHHHHHHhcCHHHHHHHHHHHHHHHhCcccccccccchhhhccCchHhHHHHHHHHhhhcCCCcchH
Q 023340 90 EPISFDLLHQHLQAQNFRQADEETRRLLIALAGEASEKRGYVFFSEVQFIAEADLKAIDELWRQYSDNKFGYS 162 (283)
Q Consensus 90 ~gidYt~L~~LLaagkWkeAD~ET~~LmL~iagr~~~~~GyL~~~dI~nfPCeDLrtIDqLW~kYS~GkFGFS 162 (283)
.--++..|+++|++.+=+-|.--+.++|--+.||. +.-.|-+.||++......+-|++.
T Consensus 5 ~f~~~~eLk~~L~~~~~~~~~~~~~kl~~YAlGR~--------------~~~~D~~~i~~i~~~~~~~~y~~~ 63 (76)
T PF07624_consen 5 SFEGAAELKQYLAERKDQFARCFAEKLLTYALGRP--------------LEFSDRCEIDRIVEAFKANGYRLR 63 (76)
T ss_pred ccCCHHHHHHHHHHCHHHHHHHHHHHHHHHHcCCC--------------CCcchHHHHHHHHHHHHHcCCCHH
Confidence 34578899999999977777888888888888983 235677899999999877777664
No 4
>PF04353 Rsd_AlgQ: Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ; InterPro: IPR007448 This family includes bacterial transcriptional regulators that are thought to act through an interaction with the conserved region 4 of the sigma(70) subunit of RNA polymerase. The Pseudomonas aeruginosa homologue, AlgQ, positively regulates virulence gene expression and is associated with the mucoid phenotype observed in P. aeruginosa isolates from cystic fibrosis patients.; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 2P7V_A.
Probab=52.81 E-value=14 Score=32.75 Aligned_cols=65 Identities=18% Similarity=0.221 Sum_probs=36.9
Q ss_pred cCHHHHHHHHHHHHHHHhCcccccccccchhhhccCc-hHhHHHHHHHHhhh-cCCCcchHHHHHHHHHhcccHHHHhhh
Q 023340 104 QNFRQADEETRRLLIALAGEASEKRGYVFFSEVQFIA-EADLKAIDELWRQY-SDNKFGYSVQKKIWEKVNKDFTNFFIR 181 (283)
Q Consensus 104 gkWkeAD~ET~~LmL~iagr~~~~~GyL~~~dI~nfP-CeDLrtIDqLW~kY-S~GkFGFSVQkqIw~~v~~d~~~Fgdr 181 (283)
.+|-++-++-.-.-|+++|-... .+....| -+.|+..-++=+.| |.||| +||+.+-..+..|++.
T Consensus 20 D~WL~~Rq~Llv~Yc~L~gl~p~-------~~~~~~~~~~~l~~FCq~LVDYvSaGHF------eIYe~l~~e~~~~~~~ 86 (153)
T PF04353_consen 20 DRWLEERQQLLVAYCKLAGLKPY-------KESLTLPSEEALQNFCQQLVDYVSAGHF------EIYEQLIDEAEAFGDS 86 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHS--------------------HHHHHHHHHHHHHHHHHHH------THHHHHHTT--SHH--
T ss_pred HHHHHHHHHHHHHHHhHhcCCCC-------ccccCCCCHHHHHHHHHHHHHHHhccch------hHHHHHHHHHHHcCch
Confidence 46888888888888899985321 1111222 24555555555666 99999 6888886666666544
No 5
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=39.06 E-value=20 Score=33.65 Aligned_cols=46 Identities=28% Similarity=0.307 Sum_probs=37.5
Q ss_pred CCCCChHHHHHHHHhcCHHHHHHHHHHHHHHHhCcccccccccchhhh
Q 023340 89 SEPISFDLLHQHLQAQNFRQADEETRRLLIALAGEASEKRGYVFFSEV 136 (283)
Q Consensus 89 ~~gidYt~L~~LLaagkWkeAD~ET~~LmL~iagr~~~~~GyL~~~dI 136 (283)
..-|.-..|++.|..+.|.-...||-++|+.+.++. .-|-+.++|.
T Consensus 71 sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~--~~G~i~f~EF 116 (221)
T KOG0037|consen 71 SGRILAKELQQALSNGTWSPFSIETCRLMISMFDRD--NSGTIGFKEF 116 (221)
T ss_pred cccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCC--CCCccCHHHH
Confidence 456788899999999999999999999999999985 3444555444
No 6
>COG5249 RER1 Golgi protein involved in Golgi-to-ER retrieval [Intracellular trafficking and secretion]
Probab=37.95 E-value=13 Score=33.47 Aligned_cols=78 Identities=26% Similarity=0.348 Sum_probs=46.9
Q ss_pred HhHHHHHHHHhhhcCCCcchHHHHHHHHHhcccHHHHhhhhcccccCCchhhccccccCCcceeeccCCCCCCCCcCccc
Q 023340 142 ADLKAIDELWRQYSDNKFGYSVQKKIWEKVNKDFTNFFIRVGWMKKLDTEMEQYNYRAFPTEFIWENGKETPVGHLPLTN 221 (283)
Q Consensus 142 eDLrtIDqLW~kYS~GkFGFSVQkqIw~~v~~d~~~FgdrVGWrk~~d~e~~~~ny~~fp~ef~~~fsl~AP~GHLP~~~ 221 (283)
.|+.++-|.|+.----+= ..-|--+++-+.-||-|| |..++ ||- ..
T Consensus 16 n~~k~LyqhylDr~~P~~-----~~RW~i~ggL~~lf~iRI-~~~~g-----wY~-----------------------ic 61 (180)
T COG5249 16 NDLKTLYQHYLDRLAPRP-----DVRWGITGGLFLLFCIRI-WSTGG-----WYL-----------------------IC 61 (180)
T ss_pred HHHHHHHHHHHhhcCCCC-----cchhhHHHHHHHHHHHHH-Hhccc-----hhh-----------------------HH
Confidence 366666666665333221 123445667778899998 77643 111 12
Q ss_pred cccHHHHHHHHhc--CCCCCCCCCCCcchhhhhh
Q 023340 222 ALRGTQLLASILN--HPAFEGMQDDDDDDNKQEE 253 (283)
Q Consensus 222 ~lrG~qll~~l~~--hpaf~~~~~~~~~~~~~~~ 253 (283)
..-|..||++++. -|+||..-|+.+++++-|+
T Consensus 62 Y~LgiyLLn~flaFLTPKfdms~eq~e~d~eiee 95 (180)
T COG5249 62 YCLGIYLLNAFLAFLTPKFDMSFEQIEDDDEIEE 95 (180)
T ss_pred HHHHHHHHHHHHHHhCCCCcccHhhhcccccccc
Confidence 3458899998876 8999986555554444433
No 7
>PF14276 DUF4363: Domain of unknown function (DUF4363)
Probab=32.09 E-value=65 Score=26.09 Aligned_cols=30 Identities=13% Similarity=0.287 Sum_probs=25.2
Q ss_pred ChHHHHHHHHhcCHHHHHHHHHHHHHHHhC
Q 023340 93 SFDLLHQHLQAQNFRQADEETRRLLIALAG 122 (283)
Q Consensus 93 dYt~L~~LLaagkWkeAD~ET~~LmL~iag 122 (283)
..+.+++...+++|.+|..++..+.-..-.
T Consensus 31 ~l~~i~~~i~~~dW~~A~~~~~~l~~~W~k 60 (121)
T PF14276_consen 31 QLEQIEEAIENEDWEKAYKETEELEKEWDK 60 (121)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 356788889999999999999998887554
No 8
>COG3889 Predicted solute binding protein [General function prediction only]
Probab=31.19 E-value=32 Score=37.79 Aligned_cols=14 Identities=50% Similarity=0.520 Sum_probs=6.9
Q ss_pred ccccCCCCcccccc
Q 023340 59 TFSSLSPSTTSSSS 72 (283)
Q Consensus 59 ~~~~~~~~~~~~~~ 72 (283)
++||.||++|+++.
T Consensus 816 ttsSps~T~Ttspt 829 (872)
T COG3889 816 TTSSPSPTQTTSPT 829 (872)
T ss_pred CCCCCCcccCCCCc
Confidence 34555555444433
No 9
>COG3160 Rsd Regulator of sigma D [Transcription]
Probab=30.92 E-value=1.2e+02 Score=27.20 Aligned_cols=64 Identities=16% Similarity=0.187 Sum_probs=40.9
Q ss_pred CHHHHHHHHHHHHHHHhCcccccccccchhhhccCchHhHHHHHHHHhhh-cCCCcchHHHHHHHHHhcccHHHHhh
Q 023340 105 NFRQADEETRRLLIALAGEASEKRGYVFFSEVQFIAEADLKAIDELWRQY-SDNKFGYSVQKKIWEKVNKDFTNFFI 180 (283)
Q Consensus 105 kWkeAD~ET~~LmL~iagr~~~~~GyL~~~dI~nfPCeDLrtIDqLW~kY-S~GkFGFSVQkqIw~~v~~d~~~Fgd 180 (283)
+|-.+-++-..-.|.++|-...++.| -.+..+.|.-.-|+-+.| |.||| +||+.+-..|..+|+
T Consensus 21 ~WLh~Rk~llvayc~l~gikp~ke~~------~plnakaL~~FCq~LvDYlSaGHF------~iYe~i~~k~~~~g~ 85 (162)
T COG3160 21 RWLHVRKHLLVAYCNLVGIKPGKESY------MPLNAKALDDFCQSLVDYLSAGHF------SIYERILHKLEGNGD 85 (162)
T ss_pred HHHHHHHHHHHHHHHHhccCcccccc------CCCCHHHHHHHHHHHHHHHhccch------HHHHHHHHHHhccCc
Confidence 57777777666777788754333332 233556666666777777 99999 688777555554443
No 10
>PF06933 SSP160: Special lobe-specific silk protein SSP160; InterPro: IPR009701 This family consists of several special lobe-specific silk protein SSP160 sequences which appear to be specific to Chironomus (Midge) species.
Probab=28.91 E-value=37 Score=35.21 Aligned_cols=11 Identities=27% Similarity=0.338 Sum_probs=5.8
Q ss_pred CChHHHHHHHH
Q 023340 92 ISFDLLHQHLQ 102 (283)
Q Consensus 92 idYt~L~~LLa 102 (283)
|-.+.|+.||.
T Consensus 334 ialqnlqall~ 344 (756)
T PF06933_consen 334 IALQNLQALLM 344 (756)
T ss_pred HHHHHHHHHHh
Confidence 33555555554
No 11
>PF08047 His_leader: Histidine operon leader peptide; InterPro: IPR012565 This family consists of the leader peptide of the histidine (his) operon. The his operon contains all the genes necessary for histidine biosynthesis. The region corresponding to the untranslated 5'-end of the transcript, named the his leader region, displays the typical features of the T box transcriptional attenuation mechanism which is involved in the regulation of many amino acid biosynthetic operons [].; GO: 0000105 histidine biosynthetic process
Probab=26.30 E-value=25 Score=20.44 Aligned_cols=9 Identities=56% Similarity=0.785 Sum_probs=5.4
Q ss_pred cchhhhhhh
Q 023340 4 NSLQSLHHH 12 (283)
Q Consensus 4 ~~~~~~~~~ 12 (283)
++.||-|||
T Consensus 2 ~rvqfk~hh 10 (16)
T PF08047_consen 2 NRVQFKHHH 10 (16)
T ss_pred ceeEecccc
Confidence 467777443
No 12
>PTZ00184 calmodulin; Provisional
Probab=26.00 E-value=2.7e+02 Score=21.67 Aligned_cols=46 Identities=13% Similarity=0.198 Sum_probs=21.3
Q ss_pred CCCChHHHHHHHHhcCHHHHHHHHHHHHHHHhCcccccccccchhhhc
Q 023340 90 EPISFDLLHQHLQAQNFRQADEETRRLLIALAGEASEKRGYVFFSEVQ 137 (283)
Q Consensus 90 ~gidYt~L~~LLaagkWkeAD~ET~~LmL~iagr~~~~~GyL~~~dI~ 137 (283)
..++|..+..+|...-=....++..+.+.+..+. ...|+|+.+++.
T Consensus 62 g~i~~~ef~~~l~~~~~~~~~~~~~~~~F~~~D~--~~~g~i~~~e~~ 107 (149)
T PTZ00184 62 GTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDR--DGNGFISAAELR 107 (149)
T ss_pred CcCcHHHHHHHHHHhccCCcHHHHHHHHHHhhCC--CCCCeEeHHHHH
Confidence 3466666665554321011122334444555544 245666665553
No 13
>PF11593 Med3: Mediator complex subunit 3 fungal; InterPro: IPR020998 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. This entry represents the subunit Med3, which is a physical target for Cyc8-Tup1, a yeast transcriptional co-repressor []. ; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex
Probab=24.62 E-value=1.2e+02 Score=30.79 Aligned_cols=11 Identities=36% Similarity=0.567 Sum_probs=5.9
Q ss_pred HHHhcCC---CCCC
Q 023340 230 ASILNHP---AFEG 240 (283)
Q Consensus 230 ~~l~~hp---af~~ 240 (283)
+.||+.- +|+.
T Consensus 321 anILsMs~~~~~~~ 334 (379)
T PF11593_consen 321 ANILSMSMNIDFQQ 334 (379)
T ss_pred HHhhccccccchhh
Confidence 3455555 5555
No 14
>KOG2196 consensus Nuclear porin [Nuclear structure]
Probab=20.90 E-value=3.6e+02 Score=25.99 Aligned_cols=32 Identities=16% Similarity=0.376 Sum_probs=21.8
Q ss_pred CCCCCChHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 023340 88 TSEPISFDLLHQHLQAQNFRQADEETRRLLIALA 121 (283)
Q Consensus 88 S~~gidYt~L~~LLaagkWkeAD~ET~~LmL~ia 121 (283)
-+..++|..|++++- +|----.+-.+++++.|
T Consensus 67 ~~s~l~~~~LeeliN--kWs~el~~Qe~vF~~q~ 98 (254)
T KOG2196|consen 67 APSSLTYKTLEELIN--KWSLELEEQERVFLQQA 98 (254)
T ss_pred CchhhhHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 366799999999986 55544444455666555
No 15
>PF14423 Imm5: Immunity protein Imm5
Probab=20.08 E-value=59 Score=29.68 Aligned_cols=11 Identities=45% Similarity=0.818 Sum_probs=8.7
Q ss_pred CCCCCCcCccc
Q 023340 211 ETPVGHLPLTN 221 (283)
Q Consensus 211 ~AP~GHLP~~~ 221 (283)
.-|+||||+..
T Consensus 12 ~s~~GhL~Lp~ 22 (183)
T PF14423_consen 12 QSPEGHLSLPL 22 (183)
T ss_pred cCCCCccCchH
Confidence 36999999853
Done!