Query 023342
Match_columns 283
No_of_seqs 72 out of 74
Neff 3.1
Searched_HMMs 13730
Date Mon Mar 25 05:12:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023342.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/023342hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1t1ea2 d.58.3.2 (A:12-190) Pr 66.1 2.5 0.00018 33.5 3.9 34 144-177 72-108 (179)
2 d1m8pa3 c.37.1.15 (A:391-573) 38.4 14 0.001 25.8 3.6 26 135-161 154-179 (183)
3 d2f1fa1 d.58.18.6 (A:2-77) Ace 37.2 17 0.0013 25.5 4.0 49 217-268 14-64 (76)
4 d1ul7a_ d.129.6.1 (A:) Map/mic 33.9 11 0.00081 27.6 2.5 47 126-172 2-49 (102)
5 d2pc6a2 d.58.18.6 (A:1-77) Ace 29.4 41 0.003 23.5 4.9 49 217-268 15-65 (77)
6 d1x6va3 c.37.1.4 (A:34-228) Ad 29.0 23 0.0017 25.3 3.6 26 135-161 167-192 (195)
7 d2ysca1 b.72.1.1 (A:8-33) Amyl 28.5 4.3 0.00031 24.3 -0.6 9 220-228 11-19 (26)
8 d2i9ia1 c.51.6.1 (A:51-271) Hy 26.5 17 0.0013 30.6 2.7 21 145-165 52-72 (221)
9 d2if1a_ d.64.1.1 (A:) Eukaryot 26.3 34 0.0025 26.1 4.3 34 246-279 91-125 (126)
10 d1ejda_ d.68.2.2 (A:) UDP-N-ac 24.6 1.2E+02 0.0089 25.4 8.1 42 151-192 193-244 (419)
11 d1g8fa3 c.37.1.15 (A:390-511) 21.6 29 0.0021 26.5 3.0 21 141-161 99-119 (122)
12 d2cfua1 d.106.1.3 (A:530-655) 21.6 92 0.0067 21.8 5.8 55 225-279 34-99 (126)
No 1
>d1t1ea2 d.58.3.2 (A:12-190) Pro-kumamolisin activation domain {Bacillus sp. MN-32 [TaxId: 198803]}
Probab=66.15 E-value=2.5 Score=33.55 Aligned_cols=34 Identities=15% Similarity=0.129 Sum_probs=28.9
Q ss_pred ChhHHHHHHHHHhhhcCceeec---CceEEEEEEeec
Q 023342 144 APNQVAGEIFSFFTRNNFVVTD---RGEVITFEGMMV 177 (283)
Q Consensus 144 p~~evl~~L~~yF~~R~Y~V~~---~~~vItFEG~V~ 177 (283)
|.++-.+.+.+|++++|..+.. +++.|+|+|.|.
T Consensus 72 ps~~~~~~V~~wL~~~Gl~v~~~~~~~~~v~~~gtv~ 108 (179)
T d1t1ea2 72 ASLDDFAEIRKFAEAHGLTLDRAHVAAGTAVLSGPVD 108 (179)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEETTTTEEEEEEEHH
T ss_pred CCHHHHHHHHHHHHHcCCcceEEecCCCEEEEEeeHH
Confidence 5567788999999999998754 688999999875
No 2
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=38.45 E-value=14 Score=25.76 Aligned_cols=26 Identities=23% Similarity=0.315 Sum_probs=22.2
Q ss_pred EEeecCCCCChhHHHHHHHHHhhhcCc
Q 023342 135 FVGEGESKKAPNQVAGEIFSFFTRNNF 161 (283)
Q Consensus 135 ~vv~~~s~~p~~evl~~L~~yF~~R~Y 161 (283)
++++. +.++++|++++|.++++++||
T Consensus 154 i~IDT-~~~s~~e~v~~I~~~L~~~g~ 179 (183)
T d1m8pa3 154 LVVDF-SKQSVRSIVHEIILVLESQGF 179 (183)
T ss_dssp EEECT-TTSCHHHHHHHHHHHHHHTTT
T ss_pred EEEEC-CCCCHHHHHHHHHHHHHHcCC
Confidence 45554 678999999999999999997
No 3
>d2f1fa1 d.58.18.6 (A:2-77) Acetolactate synthase small subunit, IlvH {Escherichia coli [TaxId: 562]}
Probab=37.24 E-value=17 Score=25.53 Aligned_cols=49 Identities=31% Similarity=0.451 Sum_probs=34.8
Q ss_pred HhhhcchhhhhhcCCcceeEEEEEEECCCCCcce--EEEEecHHHHHHHHHHcC
Q 023342 217 ILSPLAGAYYWKRASRKEQIKVKMMVGEDGDLSE--ILVQGDDQQVEQMRKELQ 268 (283)
Q Consensus 217 LLSPLAGifYWqkA~R~EqV~lKL~s~dd~~~S~--ItV~aHRDELi~L~~eL~ 268 (283)
.|+=++|+|..| +-=.|.+.+- ..+++.-|. |+++|+++.++++.+.|.
T Consensus 14 VL~RisglF~rR-g~NI~Sl~v~--~te~~~iSR~tivv~~~~~~i~qi~kQL~ 64 (76)
T d2f1fa1 14 ALSRVIGLFSQR-GYNIESLTVA--PTDDPTLSRMTIQTVGDEKVLEQIEKQLH 64 (76)
T ss_dssp HHHHHHHHHHTT-TCCCSEEEEE--ECSCSSEEEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc-CcceEEEEEc--ccCCCCeeEEEEEEECCHHHHHHHHHHHh
Confidence 466678888755 4457777765 345666665 667799999999988774
No 4
>d1ul7a_ d.129.6.1 (A:) Map/microtubule affinity-regulating kinase 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=33.89 E-value=11 Score=27.57 Aligned_cols=47 Identities=17% Similarity=0.102 Sum_probs=36.6
Q ss_pred cccceeEEEEEeecCCCCChhHHHHHHHHHhhhcCceeecC-ceEEEE
Q 023342 126 VKSKIVQKTFVGEGESKKAPNQVAGEIFSFFTRNNFVVTDR-GEVITF 172 (283)
Q Consensus 126 ~KDRi~qrT~vv~~~s~~p~~evl~~L~~yF~~R~Y~V~~~-~~vItF 172 (283)
+|-|.-+-|+-+...|.+||++++.+|..=++++|.+.... +-.+.-
T Consensus 2 ~~~~~~rf~wsv~tTS~~~P~eIm~eI~rvL~~lgv~~~~~g~y~l~c 49 (102)
T d1ul7a_ 2 SSGSSGRFTWSMKTTSSMDPSDMMREIRKVLGANNCDYEQRERFLLFC 49 (102)
T ss_dssp CCCCCCCCCCCCCCCBCSCHHHHHHHHHHHHHHTTCEEEECSTTCEEE
T ss_pred CCCCCcceeeeeecCcCCCHHHHHHHHHHHHHHcCcEEEEcCCEEEEE
Confidence 45555566788888899999999999999999999988653 234443
No 5
>d2pc6a2 d.58.18.6 (A:1-77) Acetolactate synthase small subunit, IlvH {Nitrosomonas europaea [TaxId: 915]}
Probab=29.38 E-value=41 Score=23.52 Aligned_cols=49 Identities=35% Similarity=0.467 Sum_probs=33.9
Q ss_pred HhhhcchhhhhhcCCcceeEEEEEEECCCCCcce--EEEEecHHHHHHHHHHcC
Q 023342 217 ILSPLAGAYYWKRASRKEQIKVKMMVGEDGDLSE--ILVQGDDQQVEQMRKELQ 268 (283)
Q Consensus 217 LLSPLAGifYWqkA~R~EqV~lKL~s~dd~~~S~--ItV~aHRDELi~L~~eL~ 268 (283)
.|+=++|+|..|. -=.|.+.+-- .+++.-|. |+++|+++.++++.+.|.
T Consensus 15 vL~Ris~lF~rRg-~NI~Sltv~~--te~~~iSRmtivv~~~~~~i~qi~kQL~ 65 (77)
T d2pc6a2 15 ALSRVAGLFSARG-YNIESLSVAP--TEDPTLSRMTLVTNGPDEIVEQITKQLN 65 (77)
T ss_dssp HHHHHHHHHHHHT-CCCCEEEEEE--CSSTTEEEEEEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccC-cceEEEEEec--cCCCCeEEEEEEEECCHHHHHHHHHHHh
Confidence 4566788886554 4466655543 45666665 677899999999998874
No 6
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.02 E-value=23 Score=25.32 Aligned_cols=26 Identities=8% Similarity=0.176 Sum_probs=21.7
Q ss_pred EEeecCCCCChhHHHHHHHHHhhhcCc
Q 023342 135 FVGEGESKKAPNQVAGEIFSFFTRNNF 161 (283)
Q Consensus 135 ~vv~~~s~~p~~evl~~L~~yF~~R~Y 161 (283)
++++. +.++++|++++|.+|++++|+
T Consensus 167 l~IdT-~~~s~ee~~~~Il~~l~~~~~ 192 (195)
T d1x6va3 167 LVLKT-DSCDVNDCVQQVVELLQERDI 192 (195)
T ss_dssp EEECT-TTSCHHHHHHHHHHHHHHTTS
T ss_pred EEEEC-CCCCHHHHHHHHHHHHHHCcC
Confidence 44544 667999999999999999987
No 7
>d2ysca1 b.72.1.1 (A:8-33) Amyloid beta A4 precursor protein-binding family B member 3, APBB3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.48 E-value=4.3 Score=24.25 Aligned_cols=9 Identities=56% Similarity=1.409 Sum_probs=7.3
Q ss_pred hcchhhhhh
Q 023342 220 PLAGAYYWK 228 (283)
Q Consensus 220 PLAGifYWq 228 (283)
-.||.|||.
T Consensus 11 D~ag~YyWH 19 (26)
T d2ysca1 11 DAAGTYYWH 19 (26)
T ss_dssp ETTEEEEEE
T ss_pred ccCceEEEe
Confidence 468999995
No 8
>d2i9ia1 c.51.6.1 (A:51-271) Hypothetical protein HP0492 {Helicobacter pylori [TaxId: 210]}
Probab=26.51 E-value=17 Score=30.62 Aligned_cols=21 Identities=14% Similarity=0.390 Sum_probs=18.9
Q ss_pred hhHHHHHHHHHhhhcCceeec
Q 023342 145 PNQVAGEIFSFFTRNNFVVTD 165 (283)
Q Consensus 145 ~~evl~~L~~yF~~R~Y~V~~ 165 (283)
.++++.||++.|++|||+|..
T Consensus 52 ~~~l~~qi~~ilek~GY~v~~ 72 (221)
T d2i9ia1 52 QDALINQIQTIFEKRGYQVLR 72 (221)
T ss_dssp HHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHhcCceEEe
Confidence 578999999999999999965
No 9
>d2if1a_ d.64.1.1 (A:) Eukaryotic translation initiation factor eIF-1 (SUI1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.28 E-value=34 Score=26.07 Aligned_cols=34 Identities=24% Similarity=0.269 Sum_probs=25.4
Q ss_pred CCcceEEEEe-cHHHHHHHHHHcCCCcCccEEeee
Q 023342 246 GDLSEILVQG-DDQQVEQMRKELQLNEKGMVYVKG 279 (283)
Q Consensus 246 ~~~S~ItV~a-HRDELi~L~~eL~L~ekGmv~vkg 279 (283)
+.+..|.|+| |||++.++=.+.|...+-+|.|-|
T Consensus 91 ~~~~~I~IQGD~r~~v~~~L~~~g~~~k~~I~vHg 125 (126)
T d2if1a_ 91 EYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHG 125 (126)
T ss_dssp TTSSEEEESBCCHHHHHHHHHHHTSSCTTTEECCC
T ss_pred CCCcEEEEcccHHHHHHHHHHHcCCCccccEEecC
Confidence 3445688888 488888887888887777887766
No 10
>d1ejda_ d.68.2.2 (A:) UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) {Enterobacter cloacae [TaxId: 550]}
Probab=24.58 E-value=1.2e+02 Score=25.37 Aligned_cols=42 Identities=19% Similarity=0.323 Sum_probs=30.2
Q ss_pred HHHHHhhhcCceeec-CceEEEEEE---------eecCChHHHHHHHHHHHH
Q 023342 151 EIFSFFTRNNFVVTD-RGEVITFEG---------MMVPSRGQAAFLTFCTCI 192 (283)
Q Consensus 151 ~L~~yF~~R~Y~V~~-~~~vItFEG---------~V~pS~~LAiFLTfLaai 192 (283)
....++++-|..|.. +.+.++..| .|.+.+.-|+|+..++++
T Consensus 193 ~t~~~l~~~G~~i~~~~~~~~~i~g~~~~~~~~~~V~~D~ssAa~~~~aa~i 244 (419)
T d1ejda_ 193 DTANFLVALGAKISGQGTDRITIEGVERLGGGVYRVLPDRIETGTFLVAAAI 244 (419)
T ss_dssp HHHHHHHHTTCEEECTTSSEEEEECCSCBCCEEEECCBCHHHHHHHHHHHHT
T ss_pred hHHHHhhhcceeeecCCceEEEEcccccccCCceeecChhhhhhhhhhhhcc
Confidence 456788888999885 445555554 577888989888766655
No 11
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.63 E-value=29 Score=26.47 Aligned_cols=21 Identities=14% Similarity=0.428 Sum_probs=19.9
Q ss_pred CCCChhHHHHHHHHHhhhcCc
Q 023342 141 SKKAPNQVAGEIFSFFTRNNF 161 (283)
Q Consensus 141 s~~p~~evl~~L~~yF~~R~Y 161 (283)
+..++++.+++|.+|++++||
T Consensus 99 ~~~sVee~V~qII~yLee~Gf 119 (122)
T d1g8fa3 99 ADEPISHIVQKVVLFLEDNGF 119 (122)
T ss_dssp TTCCHHHHHHHHHHHHHHTTS
T ss_pred CCCCHHHHHHHHHHHHHHCcC
Confidence 678999999999999999998
No 12
>d2cfua1 d.106.1.3 (A:530-655) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=21.57 E-value=92 Score=21.83 Aligned_cols=55 Identities=11% Similarity=0.088 Sum_probs=36.5
Q ss_pred hhhhcCCcceeEEEEEEEC-------CCCCcceEEEEecHHHHHHHHHH-cC---CCcCccEEeee
Q 023342 225 YYWKRASRKEQIKVKMMVG-------EDGDLSEILVQGDDQQVEQMRKE-LQ---LNEKGMVYVKG 279 (283)
Q Consensus 225 fYWqkA~R~EqV~lKL~s~-------dd~~~S~ItV~aHRDELi~L~~e-L~---L~ekGmv~vkg 279 (283)
+=|+=....|+..+.+... ..+...+++|+..|+.+.++-.- .. .-..|++.|+|
T Consensus 34 i~~~~tD~~e~~~l~l~ngvl~~~~~~~~~~ad~tit~~~~~l~~ll~G~~~~~~a~~~g~l~i~G 99 (126)
T d2cfua1 34 INLRLPDIGENYLLELKNSHLNNLRGVQSEDAGQTVSIDRADLNRLLLKEVSAVRLVFEGKLKSSG 99 (126)
T ss_dssp EEEEETTTTEEEEEEEETTEEEEEETCCCTTCSEEEEECHHHHHHHHTTSSCHHHHHHTTSEEEEE
T ss_pred EEEEEcCCCCeEEEEEeCCceecccCCCCCCCCEEEEEcHHHHHHHHcCCCCHHHHHHcCCEEEeC
Confidence 3344445567777766533 23456789999999999987521 11 23679999998
Done!