Query 023343
Match_columns 283
No_of_seqs 134 out of 1507
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 05:13:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023343.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023343hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfo_A Putative acetylornithin 100.0 4.3E-37 1.5E-41 277.7 19.3 252 2-282 157-416 (433)
2 3tx8_A Succinyl-diaminopimelat 100.0 1.9E-36 6.4E-41 268.1 17.5 244 2-282 116-359 (369)
3 2f7v_A Aectylcitrulline deacet 100.0 3.8E-36 1.3E-40 266.1 17.5 234 11-282 121-357 (369)
4 3isz_A Succinyl-diaminopimelat 100.0 3E-35 1E-39 261.0 23.2 244 2-282 113-363 (377)
5 1vgy_A Succinyl-diaminopimelat 100.0 1.2E-35 4E-40 265.2 20.4 244 2-282 116-366 (393)
6 3rza_A Tripeptidase; phosphory 100.0 1.2E-34 4E-39 258.9 16.0 236 2-282 142-380 (396)
7 3gb0_A Peptidase T; NP_980509. 100.0 2.5E-34 8.5E-39 254.8 15.3 236 2-282 121-360 (373)
8 3ct9_A Acetylornithine deacety 100.0 1.1E-33 3.9E-38 249.0 18.7 225 2-282 118-343 (356)
9 1cg2_A Carboxypeptidase G2; me 100.0 2.2E-34 7.5E-39 256.9 13.8 238 2-282 132-378 (393)
10 1xmb_A IAA-amino acid hydrolas 100.0 1.1E-33 3.8E-38 254.2 18.2 240 2-282 130-390 (418)
11 1ysj_A Protein YXEP; M20 famil 100.0 1.7E-33 5.8E-38 251.9 15.3 242 2-282 136-388 (404)
12 3io1_A Aminobenzoyl-glutamate 100.0 1.5E-33 5.1E-38 255.2 14.4 239 2-282 163-420 (445)
13 3pfe_A Succinyl-diaminopimelat 100.0 1.3E-32 4.3E-37 250.9 20.1 255 2-282 143-457 (472)
14 2rb7_A Peptidase, M20/M25/M40 100.0 1.2E-33 4.2E-38 249.5 12.6 227 2-282 113-347 (364)
15 3ife_A Peptidase T; metallopep 100.0 2.6E-33 9E-38 252.9 12.4 235 2-282 179-419 (434)
16 2pok_A Peptidase, M20/M25/M40 100.0 7.3E-33 2.5E-37 253.2 15.2 254 2-282 160-469 (481)
17 2zog_A Cytosolic non-specific 100.0 7.3E-32 2.5E-36 246.5 20.2 258 2-282 149-463 (479)
18 3dlj_A Beta-Ala-His dipeptidas 100.0 5.7E-31 2E-35 240.8 22.2 255 2-282 156-470 (485)
19 2v8h_A Beta-alanine synthase; 100.0 3.4E-31 1.2E-35 241.5 16.4 242 2-282 137-434 (474)
20 3n5f_A L-carbamoylase, N-carba 100.0 6.6E-31 2.3E-35 235.5 16.5 240 2-282 103-394 (408)
21 1z2l_A Allantoate amidohydrola 100.0 4.8E-31 1.7E-35 237.4 15.2 244 2-282 107-398 (423)
22 3ram_A HMRA protein; two-domai 100.0 6.3E-31 2.1E-35 234.4 13.5 238 2-281 107-360 (394)
23 2qyv_A XAA-His dipeptidase; YP 100.0 2.1E-30 7.3E-35 237.1 15.5 230 10-282 133-473 (487)
24 3mru_A Aminoacyl-histidine dip 100.0 2.5E-30 8.6E-35 236.4 15.8 243 9-282 135-475 (490)
25 1fno_A Peptidase T; metallo pe 100.0 1.2E-30 4.2E-35 234.4 13.5 234 2-282 153-393 (417)
26 3khx_A Putative dipeptidase sa 100.0 9.4E-31 3.2E-35 239.5 11.2 245 2-282 151-477 (492)
27 1lfw_A PEPV; hydrolase, dipept 99.9 5.4E-27 1.9E-31 213.7 17.0 240 2-282 132-453 (470)
28 1q7l_B Aminoacylase-1; catalys 99.4 3.4E-13 1.2E-17 93.8 6.8 64 217-282 1-67 (88)
29 3t68_A Succinyl-diaminopimelat 99.4 7.7E-13 2.6E-17 111.4 10.3 64 217-282 191-255 (268)
30 4h2k_A Succinyl-diaminopimelat 99.4 2.2E-12 7.6E-17 108.7 10.5 65 217-282 191-255 (269)
31 2fvg_A Endoglucanase; TM1049, 99.0 1.5E-10 5.2E-15 100.7 3.1 61 10-91 184-244 (340)
32 2wyr_A Cobalt-activated peptid 98.9 4.7E-09 1.6E-13 90.9 8.7 64 215-282 257-321 (332)
33 2wzn_A TET3, 354AA long hypoth 98.8 1.7E-11 5.7E-16 105.7 -9.5 218 10-282 114-336 (354)
34 1y0y_A FRV operon protein FRVX 98.6 3.9E-08 1.3E-12 85.9 6.7 65 215-282 269-337 (353)
35 1q7l_A Aminoacylase-1; catalys 98.4 3.6E-08 1.2E-12 78.9 -0.4 69 2-72 126-198 (198)
36 2gre_A Deblocking aminopeptida 97.9 9.3E-06 3.2E-10 70.6 5.3 63 216-282 268-334 (349)
37 1vhe_A Aminopeptidase/glucanas 97.8 1.2E-05 4.2E-10 70.5 4.5 66 214-282 272-341 (373)
38 1ylo_A Hypothetical protein SF 97.8 2.5E-05 8.5E-10 67.7 6.1 65 215-282 257-325 (348)
39 3cpx_A Aminopeptidase, M42 fam 97.7 1.5E-05 5.1E-10 68.5 2.4 65 215-282 242-310 (321)
40 1vho_A Endoglucanase; structur 97.7 2.3E-05 7.7E-10 68.0 3.6 66 214-282 253-323 (346)
41 3kl9_A PEPA, glutamyl aminopep 96.3 0.003 1E-07 54.8 4.4 65 215-282 266-333 (355)
42 2vpu_A TET3, 354AA long hypoth 96.2 0.004 1.4E-07 53.9 4.6 65 215-282 267-336 (354)
43 1rtq_A Bacterial leucyl aminop 95.8 0.0027 9.1E-08 53.7 1.7 52 2-56 130-181 (299)
44 1tkj_A Aminopeptidase, SGAP; d 95.4 0.0058 2E-07 51.2 2.2 52 2-56 110-162 (284)
45 3isx_A Endoglucanase; TM1050, 95.2 0.011 3.7E-07 50.9 3.2 64 216-282 266-333 (343)
46 1vhe_A Aminopeptidase/glucanas 93.7 0.022 7.5E-07 49.6 1.7 45 3-57 198-242 (373)
47 1y7e_A Probable M18-family ami 93.6 0.065 2.2E-06 47.9 4.7 65 215-282 377-448 (458)
48 3iib_A Peptidase M28; YP_92679 93.2 0.046 1.6E-06 48.8 3.0 37 2-41 282-318 (444)
49 2glf_A Probable M18-family ami 90.3 0.31 1E-05 43.4 4.9 66 215-282 368-439 (450)
50 3tc8_A Leucine aminopeptidase; 90.1 0.18 6.2E-06 42.6 3.2 51 2-54 140-200 (309)
51 2ijz_A Probable M18-family ami 89.8 0.18 6.1E-06 44.7 3.0 66 215-282 343-414 (428)
52 3gux_A Putative Zn-dependent e 89.6 0.19 6.5E-06 42.6 2.9 52 2-55 142-204 (314)
53 3vat_A Dnpep, aspartyl aminope 88.7 0.5 1.7E-05 42.5 5.1 64 216-282 405-475 (496)
54 2glj_A Probable M18-family ami 87.1 0.3 1E-05 43.6 2.7 65 215-282 380-451 (461)
55 2afw_A Glutaminyl-peptide cycl 85.0 0.34 1.2E-05 41.2 1.9 29 9-40 155-191 (329)
56 4eme_A M18 aspartyl aminopepti 84.9 0.98 3.3E-05 41.2 4.8 65 216-282 473-549 (571)
57 3kl9_A PEPA, glutamyl aminopep 80.8 0.76 2.6E-05 39.6 2.4 38 10-55 201-238 (355)
58 1ylo_A Hypothetical protein SF 79.6 1.1 3.7E-05 38.2 3.0 39 11-57 189-227 (348)
59 3kas_A Transferrin receptor pr 78.2 0.91 3.1E-05 42.3 2.2 32 7-41 320-351 (640)
60 2ek8_A Aminopeptidase; metallo 78.1 0.89 3E-05 40.1 2.0 50 2-56 253-303 (421)
61 4fuu_A Leucine aminopeptidase; 78.0 1.6 5.5E-05 36.6 3.5 51 2-54 140-201 (309)
62 2vpu_A TET3, 354AA long hypoth 77.4 1 3.4E-05 38.8 2.0 43 3-54 196-238 (354)
63 4f9u_A CG32412; alpha/beta hyd 74.4 2.2 7.5E-05 35.8 3.4 34 8-41 127-165 (312)
64 1vho_A Endoglucanase; structur 73.5 1.2 4.2E-05 37.9 1.6 38 11-56 192-229 (346)
65 3isx_A Endoglucanase; TM1050, 71.7 1.3 4.5E-05 37.9 1.3 36 12-55 198-233 (343)
66 3pb6_X Glutaminyl-peptide cycl 69.8 1.8 6.1E-05 36.8 1.7 28 9-39 159-194 (330)
67 3fed_A Glutamate carboxypeptid 68.7 2 6.8E-05 40.5 2.0 31 7-40 365-395 (707)
68 4fai_A CG5976, isoform B; alph 68.3 3 0.0001 35.4 2.9 33 8-40 151-188 (330)
69 3cpx_A Aminopeptidase, M42 fam 63.3 3.7 0.00013 34.6 2.5 39 15-57 183-221 (321)
70 1tkj_A Aminopeptidase, SGAP; d 62.3 18 0.00061 29.6 6.5 62 218-281 177-263 (284)
71 3tc8_A Leucine aminopeptidase; 52.7 38 0.0013 28.2 6.9 62 219-281 222-297 (309)
72 2jvf_A De novo protein M7; tet 43.7 58 0.002 20.4 5.5 31 143-173 15-45 (96)
73 3kz5_E Protein SOPB; partition 42.3 22 0.00076 20.8 2.6 28 143-174 21-48 (52)
74 1rtq_A Bacterial leucyl aminop 36.9 56 0.0019 26.7 5.6 62 217-279 199-267 (299)
75 3iib_A Peptidase M28; YP_92679 36.6 15 0.00052 32.4 2.1 41 240-281 372-418 (444)
76 2ek8_A Aminopeptidase; metallo 31.0 1E+02 0.0035 26.7 6.5 56 224-281 328-387 (421)
77 2ijz_A Probable M18-family ami 25.8 26 0.00089 30.8 1.7 31 2-37 245-275 (428)
78 2glj_A Probable M18-family ami 24.4 26 0.00087 31.2 1.3 25 2-27 271-295 (461)
79 1oey_A P67-PHOX, neutrophil cy 22.5 51 0.0017 21.6 2.2 28 145-172 12-39 (83)
80 2kl8_A OR15; structural genomi 21.5 1.5E+02 0.0051 18.1 7.0 26 148-174 2-27 (85)
81 2glf_A Probable M18-family ami 20.4 31 0.0011 30.5 1.0 25 2-28 259-283 (450)
No 1
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=100.00 E-value=4.3e-37 Score=277.74 Aligned_cols=252 Identities=14% Similarity=0.105 Sum_probs=205.4
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEEecCCCCCceeccCCceeEEEEEeecCCCc
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHS 81 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~~e~~~~~i~~~~~G~~~~~i~v~G~~~Hs 81 (283)
+.|++.+.+++++|.|+|+++||.|+ .|++.+++++. ++|++++.||+...++++++|..+++|+++|+++|+
T Consensus 157 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~G~~~~~~~~~----~~d~~i~~ep~~~~i~~~~~G~~~~~i~v~G~~~Ha 229 (433)
T 3pfo_A 157 DAIRTAGYAPDARVHVQTVTEEESTG---NGALSTLMRGY----RADACLIPEPTGHTLTRAQVGAVWFRLRVRGTPVHV 229 (433)
T ss_dssp HHHHHTTEEESSCEEEEEESCTTTTC---HHHHHHHHTTC----CCSEEEECCCCSSCEEEEECEEEEEEEEEECCCCBG
T ss_pred HHHHHcCCCCCccEEEEEEecCccCC---hhHHHHHhcCC----CCCEEEEeCCCCCceEEecceEEEEEEEEEcCCCcc
Confidence 56777777789999999999999987 79999997653 678999999988888999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhcCC-----CCCCCccccccccCCCcccceEEecCCCccceecCccEEEEEEEeCCC
Q 023343 82 GLPHKAINPLELAMEALKVIQTRFYKD-----FPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPF 156 (283)
Q Consensus 82 s~p~~g~nai~~~~~~l~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~nviP~~~~~~~~~R~~p~ 156 (283)
|.|+.|+||+..+++++..|+.+..+. ..+ ....+..+.+++++.|+ +|.+.|+||++|++.+++|++|+
T Consensus 230 ~~p~~g~nAi~~~~~~i~~l~~l~~~~~~~~~~~~----~~~~~~~~~~~~vg~i~-gG~~~NvIP~~a~~~~~iR~~~~ 304 (433)
T 3pfo_A 230 AYSETGTSAILSAMHLIRAFEEYTKELNAQAVRDP----WFGQVKNPIKFNVGIIK-GGDWASSTAAWCELDCRLGLLTG 304 (433)
T ss_dssp GGGGGSCCHHHHHHHHHHHHHHHHHHHHHHGGGCT----TTTTSSSCSCEEEEEEE-ECSCTTBCCCEEEEEEEEEECTT
T ss_pred CCCCcCcCHHHHHHHHHHHHHHHHHHhhhccccCc----cccccCCCceEEeeeEE-CCCCCcccCcEEEEEEEEecCCC
Confidence 999999999999999999998763210 011 00011235689999999 88999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhhhhhhcccCCCCcccccCCCCcceeEEEEEc-CCCCccccCCCCHHHHHHHHHHHHHhCCCC
Q 023343 157 YNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFD-EATNGVACNLDSRGFHVLCKATEEVVGHVN 235 (283)
Q Consensus 157 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~d~~~~~~l~~~~~~~~g~~~ 235 (283)
++.+++.++|++.++...+....+ .++.+++++. ..+|++.+++|+++++.+.+++++++|.++
T Consensus 305 ~~~~~~~~~i~~~~~~~~~~~~~~---------------~~~~~~v~~~~~~~p~~~~~~d~~~~~~~~~a~~~~~G~~~ 369 (433)
T 3pfo_A 305 DTPQEAMRGIEKCLADAQATDSFL---------------SENPAELVWSGFQADPAVCEPGGVAEDVLTAAHKAAFNAPL 369 (433)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHH---------------HHSCCEEEEEEEEECCEECCTTCHHHHHHHHHHHHHHSSCC
T ss_pred CCHHHHHHHHHHHHHHHhhhCccc---------------ccCCeEEEEecccCCcccCCCCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999998765431100 0123455554 457888888899999999999999888754
Q ss_pred -ceeecCCchhhHhhhh-CCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 236 -PYSITGTLPLIRELQD-EGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 236 -~~~~~gg~~da~~~~~-~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
...+.|+ +|+++|.. .|+|++.|||| ...+|++||++++++|.++
T Consensus 370 ~~~~~~g~-~D~~~~~~~~giP~v~~Gp~-~~~~H~~~E~i~~~~l~~~ 416 (433)
T 3pfo_A 370 DARLSTAV-NDTRYYSVDYGIPALCYGPY-GQGPHAFDERIDLESLRKT 416 (433)
T ss_dssp CEEEESSC-CTHHHHHHTTCCCEEECCCC-EECTTSTTCEEEHHHHHHH
T ss_pred ceeeeeee-ccHHHHHhhCCCCEEEECCC-CccCCCCCceEEHHHHHHH
Confidence 4456677 48999987 59999999999 6789999999999998764
No 2
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.9e-36 Score=268.12 Aligned_cols=244 Identities=14% Similarity=0.117 Sum_probs=193.3
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEEecCCCCCceeccCCceeEEEEEeecCCCc
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHS 81 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~~e~~~~~i~~~~~G~~~~~i~v~G~~~Hs 81 (283)
+.|++. .+++++|.|+|+++||.|+.+ .|++++++.+ ++.+++|++++.||+.+.++++++|..+++|+++|+++|+
T Consensus 116 ~~l~~~-~~~~~~v~~~~~~~EE~g~~~-~G~~~~~~~~-~~~~~~~~~i~~ep~~~~i~~~~~G~~~~~i~v~G~~~Ha 192 (369)
T 3tx8_A 116 ATLATS-TELKHDLTLIAYECEEVADHL-NGLGHIRDEH-PEWLAADLALLGEPTGGWIEAGCQGNLRIKVTAHGVRAHS 192 (369)
T ss_dssp HHHTSC-TTCCSEEEEEEECCCSSCTTS-CHHHHHHHHC-GGGGCCSEEEECCCCTTCEEESBCEEEEEEEEEECBCCBT
T ss_pred HHHHhh-cCCCccEEEEEEeccccCccc-ccHHHHHHhc-ccccCCCEEEEeCCCCCceeeecceEEEEEEEEeeecccc
Confidence 456553 468999999999999998621 3899999876 3456789999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCccccccccCCCcccceEEecCCCccceecCccEEEEEEEeCCCCCHHH
Q 023343 82 GLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTD 161 (283)
Q Consensus 82 s~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~nviP~~~~~~~~~R~~p~~~~~~ 161 (283)
|.|+.|.||+..+++++..|+++..+... ..++....+++++.|+ +|.+.|+||++|++.+|+|++|+++.++
T Consensus 193 ~~p~~g~nAi~~~a~~i~~l~~~~~~~~~------~~~~~~~~~~~vg~i~-gG~~~NvIP~~a~~~~diR~~~~~~~~~ 265 (369)
T 3tx8_A 193 ARSWLGDNAMHKLSPIISKVAAYKAAEVN------IDGLTYREGLNIVFCE-SGVANNVIPDLAWMNLNFRFAPNRDLNE 265 (369)
T ss_dssp TSGGGSBCTGGGGHHHHHHHHHCCCCEEE------ETTEEEECEEEEEEEE-ECSBTTBCCSEEEEEEEEEECTTSCHHH
T ss_pred CCCCcCcCHHHHHHHHHHHHHhhcccccc------cCCcccCceEEEEEEE-CCCCCccccCcEEEEEEEecCCCCCHHH
Confidence 99999999999999999999876322110 0011113588999999 8899999999999999999999999998
Q ss_pred HHHHHHHHHHHhhhhhhhcccCCCCcccccCCCCcceeEEEEEcCCCCccccCCCCHHHHHHHHHHHHHhCCCCceeecC
Q 023343 162 VMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPYSITG 241 (283)
Q Consensus 162 ~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~g 241 (283)
+.+.|++.++... .++++++++ ...+++..+.++|+++.+.+++ |...+..+.|
T Consensus 266 v~~~i~~~~~~~~--------------------~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~~g 319 (369)
T 3tx8_A 266 AIEHVVETLELDG--------------------QDGIEWAVE--DGAGGALPGLGQQVTSGLIDAV----GREKIRAKFG 319 (369)
T ss_dssp HHHHHHHHTTTTT--------------------STTEEEEEE--EEECCBCCCTTSHHHHHHHHHH----CGGGEEECCS
T ss_pred HHHHHHHHHHhcc--------------------cCCeEEEEE--ecCCCCCCCCCCHHHHHHHHHc----CCCCCccccc
Confidence 8888887776432 113455553 3344555667899988877653 5423345667
Q ss_pred CchhhHhhhhCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 242 TLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 242 g~~da~~~~~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
|+ |+++|.+.|+|++.||||....+|++||++++++|.++
T Consensus 320 gt-D~~~~~~~giP~~~~Gpg~~~~~H~~~E~v~~~~l~~~ 359 (369)
T 3tx8_A 320 WT-DVSRFSAMGIPALNFGAGDPSFAHKRDEQCPVEQITDV 359 (369)
T ss_dssp CC-THHHHHTTTCCEEEECSSCSSSSSCTTCEEEHHHHHHH
T ss_pred cc-chHHHhhCCCCEEEECCCChhhCCCCCcEEEHHHHHHH
Confidence 75 89999988999999999976789999999999999875
No 3
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=100.00 E-value=3.8e-36 Score=266.09 Aligned_cols=234 Identities=12% Similarity=0.090 Sum_probs=186.6
Q ss_pred CceeEEEEEEecccc-CCCCCcCHHHHHHccccccCCCCceEEecCCCCCceeccCCceeEEEEEeecCCCcCCCC-CCC
Q 023343 11 LKSTVIAVFIASEEN-SAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHSGLPH-KAI 88 (283)
Q Consensus 11 ~~~~i~~~~~~dEE~-g~~~~~G~~~l~~~~~~~~~~~d~~~~~e~~~~~i~~~~~G~~~~~i~v~G~~~Hss~p~-~g~ 88 (283)
++++|.|+|+++||. |+ .|++++++++. ++|++++.||+.+.++++++|..+++|+++|+++|+|.|+ .|.
T Consensus 121 ~~~~v~~~~~~~EE~~g~---~G~~~~~~~~~----~~d~~i~~e~~~~~i~~~~~g~~~~~i~v~G~~~Ha~~p~~~g~ 193 (369)
T 2f7v_A 121 GDGDAAFLFSSDEEANDP---RCIAAFLARGL----PYDAVLVAEPTMSEAVLAHRGISSVLMRFAGRAGHASGKQDPAA 193 (369)
T ss_dssp CCCCEEEEEESCTTSSSC---CHHHHHHTTCC----CCSEEEECCCSTTCBBCCBCCEEEEEEEEECCCC------CTTS
T ss_pred CCCCEEEEEEeCcccCCC---cCHHHHHhcCC----CCCEEEECCCCCCcceeecCceEEEEEEEeeeCcccCCCCcCCC
Confidence 789999999999999 76 79999998764 5789999999888888999999999999999999999999 999
Q ss_pred CHHHHHHHHHHHHHhhhcCCCCCCCccccccccCCCcccceEEecCCCccceecCccEEEEEEEeCCCCCHHHHHHHHHH
Q 023343 89 NPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQE 168 (283)
Q Consensus 89 nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~nviP~~~~~~~~~R~~p~~~~~~~~~~i~~ 168 (283)
||+..+++++..|+.+..+ +.... ....+ . .+++++.|+ +|.+.|+||++|++.+|+|++|+++.+++.+++++
T Consensus 194 nAi~~~~~~i~~l~~~~~~-~~~~~--~~~~~-~-~~~~vg~i~-gG~~~NviP~~a~~~~diR~~~~~~~~~~~~~i~~ 267 (369)
T 2f7v_A 194 SALHQAMRWGGKALDHVES-LAHAR--FGGLT-G-LRFNIGRVD-GGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAG 267 (369)
T ss_dssp CHHHHHHHHHHHHHHHHHH-TTTCE--ETTEE-S-CEEEEEEEE-ECSSTTSCCSEEEEEEEEECCTTCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhhhh-hcccc--cCccc-C-CceEEEEee-cCCCCCcCCCceEEEEEEeeCCCCCHHHHHHHHHH
Confidence 9999999999999876422 11000 00011 1 588999999 88999999999999999999999998887777776
Q ss_pred HHHHhhhhhhhcccCCCCcccccCCCCcceeEEEEEc-CCCCccccCCCCHHHHHHHHHHHHHhCCCCceeecCCchhhH
Q 023343 169 YVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFD-EATNGVACNLDSRGFHVLCKATEEVVGHVNPYSITGTLPLIR 247 (283)
Q Consensus 169 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~gg~~da~ 247 (283)
.++.. +++++++.. ..+|++.+++ +++++.+++++++++|.++...+.|++ |++
T Consensus 268 ~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~a~~~~~g~~~~~~~~g~~-D~~ 322 (369)
T 2f7v_A 268 FADPA-----------------------AAHFEETFRGPSLPSGDIAR-AEERRLAARDVADALDLPIGNAVDFWT-EAS 322 (369)
T ss_dssp TCSSC-----------------------CSEEEEEEEECCBSCSSHHH-HHHHHHHHHHHHHHTTCCBCCCBSSCC-THH
T ss_pred HHHHh-----------------------cCceEEEeccCCCCccCCCC-CHHHHHHHHHHHHhhCCCCCccccccC-cHH
Confidence 65421 245666665 4688887666 899999999999998865434456774 899
Q ss_pred hhhhCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 248 ELQDEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 248 ~~~~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
+|.+.|+|++.||||....+|++||++++++|.++
T Consensus 323 ~~~~~g~p~v~~Gpg~~~~~H~~~E~~~~~~l~~~ 357 (369)
T 2f7v_A 323 LFSAGGYTALVYGPGDIAQAHTADEFVTLAQLQRY 357 (369)
T ss_dssp HHHHTTCCEEECCSSCGGGTTCTTCEEEHHHHHHH
T ss_pred HHhhCCCCEEEECCCCccccCCCCceEEHHHHHHH
Confidence 99988999999999866789999999999999865
No 4
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=100.00 E-value=3e-35 Score=260.97 Aligned_cols=244 Identities=19% Similarity=0.154 Sum_probs=188.9
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEEecCCCCC-----ceeccCCceeEEEEEee
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQ-----PCIGTGGMIPWKLHVTG 76 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~~e~~~~~-----i~~~~~G~~~~~i~v~G 76 (283)
+.|++.+.+++++|.|+|+++||.++. .|++.+++.+..++.++|++++.|++... +..+.+|..+++|+++|
T Consensus 113 ~~l~~~~~~~~~~v~~~~~~~EE~~~~--~G~~~~~~~~~~~~~~~d~~~~~e~~~~~~~g~~i~~g~~g~~~~~i~~~G 190 (377)
T 3isz_A 113 EEYVKANPNHKGTIALLITSDEEATAK--DGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGSITGNLYIQG 190 (377)
T ss_dssp HHHHHHCTTCSSEEEEEEESCSSSCCS--SSHHHHHHHHHHTTCCCCEEEECCCCBSSSTTSEEEEEECEEEEEEEEEEC
T ss_pred HHHHHhCCCCCceEEEEEEcccccCcc--ccHHHHHHHHHhcCCCCCEEEEcCCCCcccCCceEEEEcceEEEEEEEEEc
Confidence 345566667899999999999998752 49999988654445568899998887542 56789999999999999
Q ss_pred cCCCcCCCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCccccccccCCCcccceEEecCCC-ccceecCccEEEEEEEeCC
Q 023343 77 KLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGG-GINQIPGECTVSGDVRLTP 155 (283)
Q Consensus 77 ~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~-~~nviP~~~~~~~~~R~~p 155 (283)
+++|+|.|+.|.||+..+++++.+|+....+.. ..+..+.+++++.|+ +|. ..|+||++|++.+|+|++|
T Consensus 191 ~~~Ha~~p~~g~nai~~~~~~i~~l~~~~~~~~--------~~~~~~~~~~v~~i~-gg~~~~nvip~~~~~~~diR~~~ 261 (377)
T 3isz_A 191 IQGHVAYPHLAENPIHKAALFLQELTTYQWDKG--------NEFFPPTSLQIANIH-AGTGSNNVIPAELYIQFNLRYCT 261 (377)
T ss_dssp C-------CGGGCHHHHHHHHHHHHHHCCCCCC--------CSSSCCCEEEEEEEE-ECCSCSSCCCSEEEEEEEEEECT
T ss_pred cccccCCCccCcCHHHHHHHHHHHHHhcccccc--------ccccCCceeEEEEEE-CCCCCCcccCCceEEEEEEecCC
Confidence 999999999999999999999999987532211 111235688999999 776 7999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhhhhhhcccCCCCcccccCCCCcceeEEEEEcCCCCccccCCCCHHHHHHHHHHHHHhCCCC
Q 023343 156 FYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN 235 (283)
Q Consensus 156 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~~~~~~~g~~~ 235 (283)
+++.+++.+.+++.++.. +.++++++....+|+. .+++++++.+.+++++++|.++
T Consensus 262 ~~~~~~i~~~i~~~~~~~-----------------------g~~~~i~~~~~~~p~~-~~~~~l~~~l~~a~~~~~g~~~ 317 (377)
T 3isz_A 262 EVTDEIIKQKVAEMLEKH-----------------------NLKYRIEWNLSGKPFL-TKPGKLLDSITSAIEETIGITP 317 (377)
T ss_dssp TSCHHHHHHHHHHHHHHT-----------------------TCCEEEEEEECCCCEE-CCTTHHHHHHHHHHHHHHSCCC
T ss_pred CCCHHHHHHHHHHHHHHc-----------------------CCCeEEEEEecCCCCc-CCCCHHHHHHHHHHHHHhCCCC
Confidence 999999888888887642 2456666554445543 4678999999999999888764
Q ss_pred ce-eecCCchhhHhhhhCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 236 PY-SITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 236 ~~-~~~gg~~da~~~~~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
.. .+.|+ +|++++...|+|++.|||+. ..+|++||++++++|.++
T Consensus 318 ~~~~~~g~-tDa~~~~~~g~~~v~~Gp~~-~~~H~~~E~i~~~~l~~~ 363 (377)
T 3isz_A 318 KAETGGGT-SDGRFIALMGAEVVEFGPLN-STIHKVNECVSVEDLGKC 363 (377)
T ss_dssp EEEECSSC-CSHHHHHTTTCEEEECCSBC-TTTTSTTCEEEHHHHHHH
T ss_pred eeeccCcc-cHHHHHHHcCCCEEEECCCC-CcccCCCCcEEHHHHHHH
Confidence 43 34555 59999999999999999985 679999999999999865
No 5
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=1.2e-35 Score=265.16 Aligned_cols=244 Identities=20% Similarity=0.179 Sum_probs=193.5
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEEecCCCC-----CceeccCCceeEEEEEee
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK-----QPCIGTGGMIPWKLHVTG 76 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~~e~~~~-----~i~~~~~G~~~~~i~v~G 76 (283)
+.|++.+.+++++|+|+|+++||.++. .|++.+++.+...+.++|++++.||+.. .+..+.+|..+++|+++|
T Consensus 116 ~~l~~~~~~~~~~v~~~~~~~EE~~~~--~Ga~~~~~~~~~~~~~~d~~i~~e~~~~~~~g~~i~~g~~G~~~~~i~v~G 193 (393)
T 1vgy_A 116 ERFVAKHPNHQGSIALLITSDEEGDAL--DGTTKVVDVLKARDELIDYCIVGEPTAVDKLGDMIKNGRRGSLSGNLTVKG 193 (393)
T ss_dssp HHHHHHCTTCSSEEEEEEESCSSSCCT--TSHHHHHHHHHHTTCCEEEEEECCCCBSSSTTSEEECEECEEEEEEEEEEC
T ss_pred HHHHHhcCCCCCcEEEEEEeccccCCc--CCHHHHHHHHHhcCcCCCEEEEeCCCCcccCCceeEEeeeeEEEEEEEEEc
Confidence 456666667899999999999998642 6999998876555556789999888753 256789999999999999
Q ss_pred cCCCcCCCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCccccccccCCCcccceEEecCCC-ccceecCccEEEEEEEeCC
Q 023343 77 KLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGG-GINQIPGECTVSGDVRLTP 155 (283)
Q Consensus 77 ~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~-~~nviP~~~~~~~~~R~~p 155 (283)
+++|+|.|+.|.||+..+++++.+|+....+... .+..+.+++++.|+ +|. ..|+||++|++.+|+|++|
T Consensus 194 ~~~Ha~~P~~g~nAi~~~a~~i~~l~~~~~~~~~--------~~~~~~~~~v~~i~-gG~~~~NviP~~a~~~~diR~~~ 264 (393)
T 1vgy_A 194 KQGHIAYPHLAINPVHTFAPALLELTQEVWDEGN--------EYFPPTSFQISNIN-GGTGATNVIPGELNVKFNFRFST 264 (393)
T ss_dssp BCEETTCGGGCBCHHHHHHHHHHHHHHCCCCCCC--------SSCCCCEEEEEEEE-ECCSCTTEECSEEEEEEEEEECT
T ss_pred cCcccCCCccCCCHHHHHHHHHHHhhcccccccc--------cccCCCeEEEeeEc-CCCCCCcccCCeEEEEEEEecCC
Confidence 9999999999999999999999999875321110 11234688999999 775 8999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhhhhhhcccCCCCcccccCCCCcceeEEEEEcCCCCccccCCCCHHHHHHHHHHHHHhCCCC
Q 023343 156 FYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN 235 (283)
Q Consensus 156 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~~~~~~~g~~~ 235 (283)
+++.+++.+++++.++.. +.++++++...++|+.. +++++++.+.+++++++|.++
T Consensus 265 ~~~~~~i~~~i~~~~~~~-----------------------~~~~~~~~~~~~~p~~~-~~~~l~~~~~~~~~~~~g~~~ 320 (393)
T 1vgy_A 265 ESTEAGLKQRVHAILDKH-----------------------GVQYDLQWSCSGQPFLT-QAGKLTDVARAAIAETCGIEA 320 (393)
T ss_dssp TSCHHHHHHHHHHHHHHT-----------------------TCCEEEEEEEEECCEEC-CSSHHHHHHHHHHHHHHSSCC
T ss_pred CCCHHHHHHHHHHHHHHh-----------------------CCCeEEEEecCCCcccC-CCcHHHHHHHHHHHHHcCCCc
Confidence 999999999998877642 13444554433455544 488999999999999988654
Q ss_pred ce-eecCCchhhHhhhhCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 236 PY-SITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 236 ~~-~~~gg~~da~~~~~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
.. .+.|+ +|++++...|+|++.|||+ ...+|++||++++++|.++
T Consensus 321 ~~~~~~g~-~D~~~~~~~~~P~v~~Gp~-~~~~H~~~E~i~~~~l~~~ 366 (393)
T 1vgy_A 321 ELSTTGGT-SDGRFIKAMAQELIELGPS-NATIHQINENVRLNDIPKL 366 (393)
T ss_dssp EEECCSCC-CTHHHHGGGEEEEEECCSB-CTTTTSTTCEEETTHHHHH
T ss_pred eEecCCcc-chHHHHHhCCCCEEEECCC-CCCCCCCCCceeHHHHHHH
Confidence 33 34555 5899988889999999997 4679999999999999865
No 6
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.2e-34 Score=258.91 Aligned_cols=236 Identities=16% Similarity=0.244 Sum_probs=193.9
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEEecCCC--CCceeccCCceeEEEEEeecCC
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD--KQPCIGTGGMIPWKLHVTGKLF 79 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~~e~~~--~~i~~~~~G~~~~~i~v~G~~~ 79 (283)
+.|++.+. ++++|.|+|+++||.|+ .|++.++.++ +++|+++..+++. +.+.++.+|..+++|+++|+++
T Consensus 142 ~~l~~~~~-~~~~v~~~~~~~EE~g~---~Ga~~~~~~~----~~~~~~~~~~~~~~~g~i~~~~~g~~~~~i~v~G~~~ 213 (396)
T 3rza_A 142 QVIKEQQI-PHGQIQFVITVGEESGL---IGAKELNSEL----LDADFGYAIDASADVGTTVVGAPTQMLISAKIIGKTA 213 (396)
T ss_dssp HHHHHHTC-CCCCEEEEEESCGGGTS---HHHHHCCGGG----CCCSEEEEEEESSCTTCEEEEECEEEEEEEEEECBCC
T ss_pred HHHHhcCC-CCCCEEEEEEccccccc---HhHhhhchhh----cccceEEEEecCCCcceEEEcCCceEEEEEEEEeEec
Confidence 45666663 68999999999999987 7999886543 4678888887653 5788899999999999999999
Q ss_pred CcCCCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCccccccccCCCcccceEEecCCCccceecCccEEEEEEEeCCCCCH
Q 023343 80 HSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNV 159 (283)
Q Consensus 80 Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~nviP~~~~~~~~~R~~p~~~~ 159 (283)
|+|.|+.|+||+..+++++..|+.. ++. +..+++++.|+ +|.+.|+||++|++.+++|++|.++.
T Consensus 214 Ha~~p~~g~nai~~~~~~i~~l~~~---~~~-----------~~~~~~vg~i~-gG~~~NvIP~~a~~~~diR~~~~~~~ 278 (396)
T 3rza_A 214 HASTPKEGVSAINIAAKAISRMKLG---QVD-----------EITTANIGKFH-GGSATNIVADEVILEAEARSHDPERI 278 (396)
T ss_dssp BTTSGGGSBCHHHHHHHHHHHSCCE---EEE-----------TTEEEEEEEEE-ECSCTTBCCCEEEEEEEEEESSHHHH
T ss_pred CCCCccccccHHHHHHHHHHhcccC---CCC-----------CCceeeeeEEe-cCCCCcccCceEEEEEEEEeCCHHHH
Confidence 9999999999999999999988642 111 13578999999 88999999999999999999997777
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccCCCCcccccCCCCcceeEEEEEcCCCCccccCCCCHHHHHHHHHHHHHhCCC-Ccee
Q 023343 160 TDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHV-NPYS 238 (283)
Q Consensus 160 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~~~~~~~g~~-~~~~ 238 (283)
+++.+++++.++..... +++++++++...+|++.+++|+++++.+.+++++. |.+ ....
T Consensus 279 ~~~~~~i~~~~~~~a~~-------------------~g~~~~i~~~~~~p~~~~~~d~~l~~~~~~~~~~~-g~~~~~~~ 338 (396)
T 3rza_A 279 KTQVKHMTDVFETTASE-------------------LGGKAEVTVEQSYPGFKINDNEAVVKIAQESARNL-GLSANTII 338 (396)
T ss_dssp HHHHHHHHHHHHHHHHH-------------------TTCEEEEEEEEEECCEECCTTSHHHHHHHHHHHHT-TCCCCEEE
T ss_pred HHHHHHHHHHHHHHHHh-------------------cCCEEEEEEEeccCCcccCCCcHHHHHHHHHHHHc-CCCceecc
Confidence 77777777777664432 24677888878899988788999999999999885 654 3445
Q ss_pred ecCCchhhHhhhhCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 239 ITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 239 ~~gg~~da~~~~~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
+.|| +|+++|...|+|++.|||+. ..+|++||++++++|.++
T Consensus 339 ~~g~-tD~~~~~~~giP~~~~g~g~-~~~H~~~E~v~~~~l~~~ 380 (396)
T 3rza_A 339 SGGG-SDGSIINTFGIPSVILGVGY-EKIHTTNERMPIKSLNLL 380 (396)
T ss_dssp CSSC-CHHHHHGGGTCCEEEEECCC-BSTTSTTCEEEHHHHHHH
T ss_pred ccee-ccHHHHhhCCCcEEEECCCC-CCCCCCcceeEHHHHHHH
Confidence 5677 48999988899999999984 579999999999999865
No 7
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=100.00 E-value=2.5e-34 Score=254.84 Aligned_cols=236 Identities=16% Similarity=0.231 Sum_probs=193.3
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEEecCCC--CCceeccCCceeEEEEEeecCC
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD--KQPCIGTGGMIPWKLHVTGKLF 79 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~~e~~~--~~i~~~~~G~~~~~i~v~G~~~ 79 (283)
+.|++.+. ++++|.|+|+++||.|+ .|++.+..+ ++++|++++.+++. +.+.++.+|..+++|+++|+++
T Consensus 121 ~~l~~~~~-~~~~v~~~~~~~EE~g~---~Ga~~~~~~----~~~~~~~~~~~~~~~~g~i~~~~~g~~~~~i~~~G~~~ 192 (373)
T 3gb0_A 121 RVLKEKNI-PHGTIEFIITVGEESGL---VGAKALDRE----RITAKYGYALDSDGKVGEIVVAAPTQAKVNAIIRGKTA 192 (373)
T ss_dssp HHHHHTTC-CCCCEEEEEESCGGGTS---HHHHHSCGG----GCCCSEEEEEEECSCTTEEEEEECEEEEEEEEEECBCC
T ss_pred HHHHhcCC-CCCCEEEEEEeccccCc---hhhhhhCHH----hcCCCEEEEEcCCCCCCeEEEcCCCcEEEEEEEEeEec
Confidence 45666664 78999999999999987 799988543 34678888888754 4678899999999999999999
Q ss_pred CcC-CCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCccccccccCCCcccceEEecCCCccceecCccEEEEEEEeCCCCC
Q 023343 80 HSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYN 158 (283)
Q Consensus 80 Hss-~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~nviP~~~~~~~~~R~~p~~~ 158 (283)
|+| .|+.|+||+..+++++..|+.. +++ +..+++++.|+ +|.+.|+||++|++.+++|+.|.++
T Consensus 193 Ha~~~p~~g~nai~~~~~~i~~l~~~---~~~-----------~~~~~~vg~i~-gG~~~Nvip~~~~~~~d~R~~~~~~ 257 (373)
T 3gb0_A 193 HAGVAPEKGVSAITIAAKAIAKMPLG---RID-----------SETTANIGRFE-GGTQTNIVCDHVQIFAEARSLINEK 257 (373)
T ss_dssp BTTTCGGGSBCHHHHHHHHHTTSCCE---EEE-----------TTEEEEEEEEE-ECSCTTBCCCEEEEEEEEEESSHHH
T ss_pred CCCCChhhCcCHHHHHHHHHHhcccc---cCC-----------CccccceeEEe-cCcccccccceEEEEEEEecCCHHH
Confidence 999 7999999999999999887542 111 13577899999 8899999999999999999999777
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccCCCCcccccCCCCcceeEEEEEcCCCCccccCCCCHHHHHHHHHHHHHhCCCC-ce
Q 023343 159 VTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN-PY 237 (283)
Q Consensus 159 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~~~~~~~g~~~-~~ 237 (283)
.+++.+++++.++..... +++++++++...+|++.+++|+++++.+.+++++ .|.+. ..
T Consensus 258 ~~~~~~~i~~~~~~~~~~-------------------~g~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~~~~~ 317 (373)
T 3gb0_A 258 MEAQVAKMKEAFETTAKE-------------------MGGHADVEVNVMYPGFKFADGDHVVEVAKRAAEK-IGRTPSLH 317 (373)
T ss_dssp HHHHHHHHHHHHHHHHHH-------------------TTCEEEEEEEEEECCEECCTTCHHHHHHHHHHHH-TTCCCEEE
T ss_pred HHHHHHHHHHHHHHHHHh-------------------cCCeEEEEEecccCCcccCCCCHHHHHHHHHHHH-hCCCceEe
Confidence 777777777777665432 2467788877788998877899999999999998 57543 34
Q ss_pred eecCCchhhHhhhhCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 238 SITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 238 ~~~gg~~da~~~~~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
.+.|| +|+++|.+.|+|++.|||+. ..+|++||++++++|.++
T Consensus 318 ~~~g~-~D~~~~~~~gip~~~~g~~~-~~~H~~~E~i~~~~l~~~ 360 (373)
T 3gb0_A 318 QSGGG-SDANVIAGHGIPTVNLAVGY-EEIHTTNEKIPVEELAKT 360 (373)
T ss_dssp ECSSC-CHHHHHHHTTCCEEEEECCC-BSTTSTTCEEEHHHHHHH
T ss_pred cccCc-chHHHHHhCCCCEEEecCCC-CcCcCCceEEEHHHHHHH
Confidence 45667 48999988899999999984 579999999999999865
No 8
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=1.1e-33 Score=249.01 Aligned_cols=225 Identities=17% Similarity=0.200 Sum_probs=182.9
Q ss_pred cccccccCCCceeEEEEEEecccc-CCCCCcCHHHHHHccccccCCCCceEEecCCCCCceeccCCceeEEEEEeecCCC
Q 023343 2 RKLGETKLKLKSTVIAVFIASEEN-SAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFH 80 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~-g~~~~~G~~~l~~~~~~~~~~~d~~~~~e~~~~~i~~~~~G~~~~~i~v~G~~~H 80 (283)
+.|++.+ ++++|.|+|+++||. |+ .|++++++++. ++|++++.||+.+.++++++|..+++|+++|+++|
T Consensus 118 ~~l~~~~--~~~~v~~~~~~~EE~~g~---~G~~~~~~~~~----~~d~~i~~ep~~~~i~~~~~G~~~~~i~~~G~~~H 188 (356)
T 3ct9_A 118 LQLCRTS--QNYNLIYLASCEEEVSGK---EGIESVLPGLP----PVSFAIVGEPTEMQPAIAEKGLMVLDVTATGKAGH 188 (356)
T ss_dssp HHHTTSC--CSSEEEEEEECCGGGTCT---TTHHHHGGGSC----CCSEEEECCSBTTCCEEEECCCEEEEEEEECBCCB
T ss_pred HHHHhcC--CCCCEEEEEEeCcccCCc---cCHHHHHhhCC----CCCEEEEcCCCCceEEEeeeEEEEEEEEEECCCcc
Confidence 4566665 889999999999998 76 79999998762 57899999998888889999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCccccccccCCCcccceEEecCCCccceecCccEEEEEEEeCCCCCHH
Q 023343 81 SGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVT 160 (283)
Q Consensus 81 ss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~nviP~~~~~~~~~R~~p~~~~~ 160 (283)
+|.| .|+||+..+++++.+|+.+..+...+ +..+.+++++.|+ +|.+.|+||++|++.+++|++|+++.+
T Consensus 189 a~~p-~g~nAi~~~~~~i~~l~~~~~~~~~~--------~~~~~~~~vg~i~-gG~~~NviP~~a~~~~~iR~~~~~~~~ 258 (356)
T 3ct9_A 189 AARD-EGDNAIYKVLNDIAWFRDYRFEKESP--------LLGPVKMSVTVIN-AGTQHNVVPDKCTFVVDIRSNELYSNE 258 (356)
T ss_dssp TTSS-CCBCTTGGGHHHHHHHHHCCCSCCBT--------TTBSCEEEEEEEE-ECSSTTBCCSEEEEEEEEECCTTCCHH
T ss_pred cCCC-CCCCHHHHHHHHHHHHHhhhcccccc--------cCCCCcEEeeEEe-cCCcCCcCCCceEEEEEEeeCCCCCHH
Confidence 9999 99999999999999998763221111 1124688999999 889999999999999999999999988
Q ss_pred HHHHHHHHHHHHhhhhhhhcccCCCCcccccCCCCcceeEEEEEcCCCCccccCCCCHHHHHHHHHHHHHhCCCCceeec
Q 023343 161 DVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPYSIT 240 (283)
Q Consensus 161 ~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~ 240 (283)
++.+++++.++. +++++. ..+|++.+++|+++++.+.++++ .++.+.
T Consensus 259 ~~~~~i~~~~~~--------------------------~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~------~~~~~~ 305 (356)
T 3ct9_A 259 DLFAEIRKHIAC--------------------------DAKARS-FRLNSSRIDEKHPFVQKAVKMGR------IPFGSP 305 (356)
T ss_dssp HHHHHHHHHCCS--------------------------EEEESC-SCSCCEECCTTSHHHHHHHHTTC------CCEEEC
T ss_pred HHHHHHHHHhhC--------------------------eEEEee-ccCCCCCCCCCCHHHHHHHHHhc------CCcccc
Confidence 877777666431 233332 66888888889999998887764 234567
Q ss_pred CCchhhHhhhhCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 241 GTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 241 gg~~da~~~~~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
|++ |++. .++|++.||||....+|++||++++++|.++
T Consensus 306 g~t-D~~~---~~~p~v~~G~g~~~~~H~~~E~i~~~~l~~~ 343 (356)
T 3ct9_A 306 TLS-DQAL---MSFASVKIGPGRSSRSHTAEEYIMLKEIEEA 343 (356)
T ss_dssp SCC-GGGG---CCSCEEECCSSBGGGTTSTTCEEEHHHHHHH
T ss_pred ccc-chhh---cCCCEEEECCCccccCcCCCcEEEHHHHHHH
Confidence 775 7663 4899999999866689999999999999764
No 9
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=2.2e-34 Score=256.89 Aligned_cols=238 Identities=19% Similarity=0.183 Sum_probs=190.7
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEEecCCC---CCceeccCCceeEEEEEeecC
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD---KQPCIGTGGMIPWKLHVTGKL 78 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~~e~~~---~~i~~~~~G~~~~~i~v~G~~ 78 (283)
+.|++.+.+++++|.|+|+++||.|+ .|++++++++. .++|++++.||+. +.++.+++|..+++|+++|++
T Consensus 132 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~G~~~~~~~~~---~~~d~~i~~e~~~~~~~~i~~~~~G~~~~~i~v~G~~ 205 (393)
T 1cg2_A 132 KLLKEYGVRDYGTITVLFNTDEEKGS---FGSRDLIQEEA---KLADYVLSFEPTSAGDEKLSLGTSGIAYVQVNITGKA 205 (393)
T ss_dssp HHHHHTTCCCSSEEEEEEESCGGGTT---TTTHHHHHHHH---HHCSEEEECCCEETTSCEEESEECEEEEEEEEEECBC
T ss_pred HHHHhcCCCCCCCEEEEEEcccccCC---ccHHHHHHHHh---hcCCEEEEeCCCCCCCCcEEEeeeeeEEEEEEEEeee
Confidence 56777777788899999999999987 79999998643 2478999999873 567889999999999999999
Q ss_pred CCcC-CCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCccccccccCCCcccceEEecCCCccceecCccEEEEEEEeCCCC
Q 023343 79 FHSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFY 157 (283)
Q Consensus 79 ~Hss-~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~nviP~~~~~~~~~R~~p~~ 157 (283)
+||| .|+.|.||+..+++++..|+.+.. .. ...+++++.|+ +|.+.|+||++|++.+++|++|++
T Consensus 206 ~Hag~~p~~g~nAi~~~~~~i~~l~~~~~-~~------------~~~~~~v~~i~-gG~~~NvIP~~a~~~~~iR~~~~~ 271 (393)
T 1cg2_A 206 SHAGAAPELGVNALVEASDLVLRTMNIDD-KA------------KNLRFNWTIAK-AGNVSNIIPASATLNADVRYARNE 271 (393)
T ss_dssp EETTSCGGGSBCHHHHHHHHHHHHGGGCB-TT------------TTEEEEEEEEE-ECSSTTEECSEEEEEEEEEESSHH
T ss_pred cccCCCcccCcCHHHHHHHHHHHHHhhhC-cc------------cCceEEEEEEe-CCCCCCEECcccEEEEEEeeCChh
Confidence 9997 799999999999999999987632 11 13588999999 899999999999999999999977
Q ss_pred CHHHHHHHHHHHHHHhhhhhhhcccCCCCcccccCCCCcceeEEEEEcCCCCccccC-CCCHHHHHHHHHHHHHhCCCC-
Q 023343 158 NVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACN-LDSRGFHVLCKATEEVVGHVN- 235 (283)
Q Consensus 158 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~d~~~~~~l~~~~~~~~g~~~- 235 (283)
+.+++.+++++.++.. ...++++++++...+|++..+ .++++++.+++++++ +|.++
T Consensus 272 ~~~~i~~~i~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~~~ 330 (393)
T 1cg2_A 272 DFDAAMKTLEERAQQK--------------------KLPEADVKVIVTRGRPAFNAGEGGKKLVDKAVAYYKE-AGGTLG 330 (393)
T ss_dssp HHHHHHHHHHHHHTSC--------------------SSTTCEEEEEEEECSCCEECHHHHHHHHHHHHHHHHH-TTCCCE
T ss_pred hHHHHHHHHHHHHhcc--------------------cCCCcEEEEEeccccCCccCCcchHHHHHHHHHHHHH-hCCCCc
Confidence 6666666666665431 122467777777778887654 357899999999976 57543
Q ss_pred cee-ecCCchhhHhhhhCCCcEE-EEcCCCCccCCC-CCcccchhhhhhh
Q 023343 236 PYS-ITGTLPLIRELQDEGFDVQ-TAGYGLMATYHA-DNEYCLLSDIRLT 282 (283)
Q Consensus 236 ~~~-~~gg~~da~~~~~~g~p~v-~~g~g~~~~~H~-~nE~i~~~~l~~~ 282 (283)
+.. +.|| +|++++...|+|++ .|||+ ...+|+ +||++++++|.++
T Consensus 331 ~~~~~~g~-tD~~~~~~~giP~~~~~G~~-~~~~H~~~~E~i~~~~l~~~ 378 (393)
T 1cg2_A 331 VEERTGGG-TDAAYAALSGKPVIESLGLP-GFGYHSDKAEYVDISAIPRR 378 (393)
T ss_dssp EESCBSCC-CTHHHHGGGSCCEECCCSCE-EECTTSSSCCEEEGGGHHHH
T ss_pred cccCCCcc-cHHHHHHhCCCCEEEeCCCC-CCCccCCCcceEEehhHHHH
Confidence 333 5566 58999988899998 47775 357999 9999999999864
No 10
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=100.00 E-value=1.1e-33 Score=254.20 Aligned_cols=240 Identities=17% Similarity=0.230 Sum_probs=173.6
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEEec-----CCCC---CceeccCCceeEEEE
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWID-----TADK---QPCIGTGGMIPWKLH 73 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~~e-----~~~~---~i~~~~~G~~~~~i~ 73 (283)
+.|++.+.+++++|.|+|+++|| |+ .|++++++++.+++ +|++++.| +++. .+..+++|..+++|+
T Consensus 130 ~~l~~~~~~~~~~v~~~~~~~EE-g~---~G~~~~~~~g~~~~--~d~~i~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~ 203 (418)
T 1xmb_A 130 KILHEHRHHLQGTVVLIFQPAEE-GL---SGAKKMREEGALKN--VEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAV 203 (418)
T ss_dssp HHHHHTGGGCSSEEEEEEECCTT-TT---CHHHHHHHTTTTTT--EEEEEEEEEEEEEETTCEEECSEEEECEEEEEEEE
T ss_pred HHHHhccccCCceEEEEEecccc-cc---ccHHHHHHcCCcCC--CCEEEEEecCCCCCCceeEeeeccccccceeEEEE
Confidence 56777777799999999999999 77 79999999876543 56787744 3332 345678999999999
Q ss_pred EeecCCCcCCCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCccccccccCCCcccceEEecCCCccceecCccEEEEEEEe
Q 023343 74 VTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (283)
Q Consensus 74 v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~nviP~~~~~~~~~R~ 153 (283)
++|+++|+|.|+.|+||+..|++++..|+.+..+...+ ..+.+++++.|+ +|.+.|+||++|++.+|+|+
T Consensus 204 v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~---------~~~~t~~vg~i~-gG~~~NvIP~~a~~~~diR~ 273 (418)
T 1xmb_A 204 ITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDP---------LDSKVVTVSKVN-GGNAFNVIPDSITIGGTLRA 273 (418)
T ss_dssp EEEC---------CCHHHHHHHHHHHHHHTTCBCCSSG---------GGCEEEEEEEEC---------CCEEEEEEEEEE
T ss_pred EEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccCC---------CCCcEEEEEEEE-ecCcCCcCCCeEEEEEEEcc
Confidence 99999999999999999999999999998764332211 123578999999 88999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhhhhhcccCCCCcccccCCCCcceeEEEEEcCC----CCccccCCCCHHHHHHHHHHHH
Q 023343 154 TPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEA----TNGVACNLDSRGFHVLCKATEE 229 (283)
Q Consensus 154 ~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~p~~~~~~d~~~~~~l~~~~~~ 229 (283)
+| +.+++.+++++.++..... +++++++++... +|++ ++|+++++.+++++++
T Consensus 274 ~~--~~~~i~~~i~~~~~~~a~~-------------------~g~~~~~~~~~~~~~p~~~~--~~d~~l~~~~~~~~~~ 330 (418)
T 1xmb_A 274 FT--GFTQLQQRVKEVITKQAAV-------------------HRCNASVNLTPNGREPMPPT--VNNKDLYKQFKKVVRD 330 (418)
T ss_dssp SS--CHHHHHHHHHHHHHHHHHH-------------------TTEEEEEESSGGGCCCBCCE--EECHHHHHHHHHHHHH
T ss_pred Cc--HHHHHHHHHHHHHHHHHHH-------------------hCCeEEEEEccCCcccCCCc--cCCHHHHHHHHHHHHH
Confidence 99 8899999998888765432 246777776655 5554 3788999999999999
Q ss_pred HhCCCC---ceeecCCchhhHhhhhCCCcEEE--EcCCC----CccCCCCCcccchhhhhhh
Q 023343 230 VVGHVN---PYSITGTLPLIRELQDEGFDVQT--AGYGL----MATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 230 ~~g~~~---~~~~~gg~~da~~~~~~g~p~v~--~g~g~----~~~~H~~nE~i~~~~l~~~ 282 (283)
++|.++ +....|++ |+++|... +|++. |||+. ...+|++||++++++|.++
T Consensus 331 ~~g~~~~~~~~~~~g~t-D~~~~~~~-~P~~~~~~G~~~~~~~~~~~H~~~E~i~~~~l~~~ 390 (418)
T 1xmb_A 331 LLGQEAFVEAAPVMGSE-DFSYFAET-IPGHFSLLGMQDETNGYASSHSPLYRINEDVLPYG 390 (418)
T ss_dssp HHCGGGEEECCCBCCCC-THHHHHTT-SCEEEEEEEEECTTCCSCCTTCTTCCCCGGGHHHH
T ss_pred hcCCcceeccCCCCCcc-hHHHHHHH-CCEEEEEEeCCCCCCCCCCCCCCCCccCHHHHHHH
Confidence 888653 34556774 88888764 89853 68764 2579999999999998764
No 11
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=1.7e-33 Score=251.95 Aligned_cols=242 Identities=17% Similarity=0.192 Sum_probs=177.7
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEEe--cCCC--CCce--ec--cCCceeEEEE
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWI--DTAD--KQPC--IG--TGGMIPWKLH 73 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~~--e~~~--~~i~--~~--~~G~~~~~i~ 73 (283)
+.|++.+.+++++|.|+|+++||. + .|++++++++.+++ +|+++.. +|+. +.+. .| .+|..+++|+
T Consensus 136 ~~l~~~~~~~~~~v~~~~~~~EE~-~---~G~~~~~~~g~~~~--~d~~i~~h~ep~~~~g~v~~~~g~~~~g~~~~~i~ 209 (404)
T 1ysj_A 136 MLLNQRRAELKGTVRFIFQPAEEI-A---AGARKVLEAGVLNG--VSAIFGMHNKPDLPVGTIGVKEGPLMASVDRFEIV 209 (404)
T ss_dssp HHHHTCGGGCSSEEEEEEESCTTT-T---CHHHHHHHTTTTTT--EEEEEEEEEETTSCTTEEEECSEEEECCEEEEEEE
T ss_pred HHHHhccccCCceEEEEEeccccc-c---hhHHHHHhcCCCcC--CCEEEEEecCCCCCCceEEeccChhhcccceEEEE
Confidence 457777778999999999999998 5 69999999876543 4567765 5542 2232 24 6899999999
Q ss_pred EeecCCCcCCCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCccccccccCCCcccceEEecCCCccceecCccEEEEEEEe
Q 023343 74 VTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (283)
Q Consensus 74 v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~nviP~~~~~~~~~R~ 153 (283)
++|+++|+|.|+.|.||+..|++++..|+++..+...+ ..+.+++++.|+ +|.+.|+||++|++.+|+|+
T Consensus 210 v~G~~~Has~P~~g~nAi~~~~~~i~~l~~~~~~~~~~---------~~~~~~~vg~i~-gG~~~NvIP~~a~~~~diR~ 279 (404)
T 1ysj_A 210 IKGKGGHASIPNNSIDPIAAAGQIISGLQSVVSRNISS---------LQNAVVSITRVQ-AGTSWNVIPDQAEMEGTVRT 279 (404)
T ss_dssp EECC--------CCCCHHHHHHHHHHHHC--------------------CCEEEEEEEE-ECSCSSSCCSEEEEEEEEEC
T ss_pred EEccCccccCcccCCCHHHHHHHHHHHHHHHHhhhcCC---------CCCcEEEEEEEE-cCCCCceecCceEEEEEEec
Confidence 99999999999999999999999999997653222211 123588999999 89999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhhhhhcccCCCCcccccCCCCcceeEEEEEcCCCCccccCCCCHHHHHHHHHHHHH-hC
Q 023343 154 TPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEV-VG 232 (283)
Q Consensus 154 ~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~~~~~~-~g 232 (283)
+|+++.+++.+++++.++..... ++++++++....+|++. .|.++++.+.++++++ +|
T Consensus 280 ~~~~~~~~i~~~i~~~~~~~~~~-------------------~g~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~g~g 338 (404)
T 1ysj_A 280 FQKEARQAVPEHMRRVAEGIAAG-------------------YGAQAEFKWFPYLPSVQ--NDGTFLNAASEAAARLGYQ 338 (404)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHH-------------------TTCEEEEEEEEEECCEE--ECGGGHHHHHHHHHHTTCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH-------------------hCCEEEEEEecCCCCcc--CCHHHHHHHHHHHHHhcCC
Confidence 99888888888888877764322 24667777666788876 4578999999999998 67
Q ss_pred CCCceeecCCchhhHhhhhCCCcEE--EEcCCCCccCCCCCcccchhhhhhh
Q 023343 233 HVNPYSITGTLPLIRELQDEGFDVQ--TAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 233 ~~~~~~~~gg~~da~~~~~~g~p~v--~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
.++.....|+ +|+++|... +|++ .|||+....+|++||++++++|.++
T Consensus 339 ~~~~~~~~g~-tD~~~~~~~-~p~~~~~~G~~~~~~~H~~~E~v~~~~l~~~ 388 (404)
T 1ysj_A 339 TVHAEQSPGG-EDFALYQEK-IPGFFVWMGTNGTEEWHHPAFTLDEEALTVA 388 (404)
T ss_dssp EEECCCBSSC-CTHHHHHTT-SCEEEEEEECCCSSCTTCTTCCCCTTHHHHH
T ss_pred ccccccCCcc-chHHHHHHH-CCeEEEEEcCCCCCCCCCCCCcCCHHHHHHH
Confidence 5322255667 488888775 8865 6788854679999999999998764
No 12
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=1.5e-33 Score=255.16 Aligned_cols=239 Identities=17% Similarity=0.136 Sum_probs=178.3
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEEecCCC----CCceeccCC---ceeEEEEE
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD----KQPCIGTGG---MIPWKLHV 74 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~~e~~~----~~i~~~~~G---~~~~~i~v 74 (283)
+.|++.+.+++++|+|+|+++||. + .|+++|++++.+++ +|++++.|+++ +.+.++.+| ..+++|++
T Consensus 163 ~~L~~~~~~~~g~v~l~f~p~EE~-~---~Ga~~~i~~g~~~~--~d~~~~~h~~~~~~~g~i~~~~~g~~a~~~~~i~v 236 (445)
T 3io1_A 163 HVLKQYAAQLNGVIKLIFQPAEEG-T---RGARAMVAAGVVDD--VDYFTAIHIGTGVPAGTVVCGGDNFMATTKFDVQF 236 (445)
T ss_dssp HHHHHTGGGCCSEEEEEEESCTTT-T---CHHHHHHHTTTTTT--CSEEEEEEEEEEEETTBEESCCCCBCEEEEEEEEE
T ss_pred HHHHhCcCcCCceEEEEEeccccc-c---chHHHHHHcCCccc--cceeEEEeccCCCCCCeEEEecCCeeEEEEEEEEE
Confidence 467777778999999999999995 4 59999999987764 67999988753 456665555 47999999
Q ss_pred eecCCCc-CCCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCccccccccCCCcccceEEecCCCccceecCccEEEEEEEe
Q 023343 75 TGKLFHS-GLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (283)
Q Consensus 75 ~G~~~Hs-s~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~nviP~~~~~~~~~R~ 153 (283)
+|+++|+ +.|+.|+||+..+++++..|+.+. +.+. +..+++++.|+ +|.+.|+||++|++.+++|+
T Consensus 237 ~Gk~~HaGs~P~~g~nAi~~aa~~i~~l~~l~-~~~~-----------~~~~~~vg~i~-gG~~~NvIP~~a~~~~~iR~ 303 (445)
T 3io1_A 237 SGVAAHAGGKPEDGRNALLAAAQAALGLHAIP-PHSA-----------GASRVNVGVMQ-AGTGRNVVPSSALLKVETRG 303 (445)
T ss_dssp ECCCSSTTCCGGGCCCHHHHHHHHHHHHHTCC-CBTT-----------BCEEEEEEEEE-ECSCTTSCCCEEEEEEEEEE
T ss_pred EeecCCCCCCCcCCcCHHHHHHHHHHHHHHHH-hhcC-----------CCeEEEEEEEe-cCCCCceeCCeEEEEEEEec
Confidence 9999998 689999999999999999998862 2221 23678999999 88999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhhhhhcccCCCCcccccCCCCcceeEEEEEcCCCCccccCCCCHHHHHHHHHHHHHhCC
Q 023343 154 TPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGH 233 (283)
Q Consensus 154 ~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~~~~~~~g~ 233 (283)
.|.++.+++.++|++.++..+. .+++++++++...+|++ .+|.++++.+++++++++|.
T Consensus 304 ~~~~~~~~i~~~i~~~~~~~a~-------------------~~g~~~~i~~~~~~~~~--~~d~~l~~~~~~a~~~~~g~ 362 (445)
T 3io1_A 304 ESEAINQYVFERAQHVVAGAAA-------------------MYEARYELRMMGAATAS--APSPAWVDYLREQAARVPGV 362 (445)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHH-------------------HTTCEEEEEEEEEECCC--CCCHHHHHHHHHHHHHSTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHH-------------------HhCCeEEEEEecCCCCc--CCCHHHHHHHHHHHHHhcCC
Confidence 9977777777777777665433 22467777777677774 36789999999999998775
Q ss_pred CC---cee-ecCCchhhHhhhhCCCc------E-EEEcCCCCccCCCCCcccchhhhhhh
Q 023343 234 VN---PYS-ITGTLPLIRELQDEGFD------V-QTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 234 ~~---~~~-~~gg~~da~~~~~~g~p------~-v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
.. ... ..|++ |+++|.+. +| + +.|||+....+|++||++++++|..+
T Consensus 363 ~~v~~~~~~~~g~~-D~~~~~~~-~P~~gg~~~~~~~G~~~~~~~H~~~E~i~~~~l~~g 420 (445)
T 3io1_A 363 QQAVDRIAAPAGSE-DATLMMAR-VQARGGLASYMIFGTELSAGHHNEKFDFDESVMAVA 420 (445)
T ss_dssp CBCBSSCCCCCBCC-THHHHHHH-HHHTTCEEEEEEEEEEC-----------CCCHHHHH
T ss_pred ccceecCCCCccHH-HHHHHHHH-hcccCCceEEEEEeCCCCCCCCCCCCcCCHHHHHHH
Confidence 42 223 36674 88887764 33 3 56788755689999999999998764
No 13
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=100.00 E-value=1.3e-32 Score=250.87 Aligned_cols=255 Identities=15% Similarity=0.123 Sum_probs=194.7
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccC-CCCceEEecCCC-----CCceeccCCceeEEEEE-
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKL-KGGPLYWIDTAD-----KQPCIGTGGMIPWKLHV- 74 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~-~~d~~~~~e~~~-----~~i~~~~~G~~~~~i~v- 74 (283)
++|++.+.+++ +|+|+|+++||+|+ .|++.+++++. +.+ ++|++++.|++. ..+.+|.+|..++++++
T Consensus 143 ~~l~~~~~~~~-~v~~~~~~~EE~g~---~g~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~i~~g~~G~~~~~~~v~ 217 (472)
T 3pfe_A 143 RALEQQGLPYP-RCILIIEACEESGS---YDLPFYIELLK-ERIGKPSLVICLDSGAGNYEQLWMTTSLRGNLVGKLTVE 217 (472)
T ss_dssp HHHHHTTCCCE-EEEEEEESCGGGTS---TTHHHHHHHHH-HHHCCCSEEEEECCBCSCSSSCEEEEEECEEEEEEEEEE
T ss_pred HHHHHcCCCCC-cEEEEEEeCCCCCC---hhHHHHHHHhH-hhccCCCEEEEeCCCcCCCCCeeEEEeeeEEEEEEEEEE
Confidence 56777777777 99999999999988 79999998762 212 578999998653 24668999999877555
Q ss_pred -eecCCCcCCCCCC-CCHHHHHHHHHHHHHhhh---------cCCCCCCCc-c-------------ccc-------ccc-
Q 023343 75 -TGKLFHSGLPHKA-INPLELAMEALKVIQTRF---------YKDFPPHPK-E-------------QVY-------GFE- 121 (283)
Q Consensus 75 -~G~~~Hss~p~~g-~nai~~~~~~l~~l~~~~---------~~~~~~~~~-~-------------~~~-------~~~- 121 (283)
+|+++|||.|+.+ .||+..+++++++|+++. ++.+++... . ... .+.
T Consensus 218 ~~G~~~H~~~~~~~~~nai~~~~~~i~~l~~~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (472)
T 3pfe_A 218 LINEGVHSGSASGIVADSFRVARQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQ 297 (472)
T ss_dssp SCSSCBCHHHHTTTSCCHHHHHHHHHHHHBCTTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTCCCSCS
T ss_pred eCCCCcccCCCCCCCCCHHHHHHHHHHHhhCcCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCcccccc
Confidence 8999999988754 599999999999998752 111211000 0 000 000
Q ss_pred ----------CCCcccceEEecCC----CccceecCccEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhhhhhcccCCCCc
Q 023343 122 ----------TPSTMKPTQWSYPG----GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVS 187 (283)
Q Consensus 122 ----------~~~~~~~~~i~~~g----~~~nviP~~~~~~~~~R~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 187 (283)
...+++++.|+ +| ++.|+||++|++.+++|++|+++.+.+.+.|++.++...
T Consensus 298 ~~~~~~~~~~~~~tl~i~~i~-gG~~~g~a~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~------------- 363 (472)
T 3pfe_A 298 DKQQLILNRTWRPALTVTGAD-GFPAIADAGNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNP------------- 363 (472)
T ss_dssp CHHHHHHHHHTSCEEEEEEEE-SCCCTTTCCSCBCSEEEEEEEEEECTTCCHHHHHHHHHHHHHSSC-------------
T ss_pred chHHHHHHhhcCCcEEEeeee-cCcCCCCCCCEeCCccEEEEEeecCCCCCHHHHHHHHHHHHHhhC-------------
Confidence 03588999999 65 689999999999999999999999999999988887542
Q ss_pred ccccCCCCcceeEEEEEcC-CCCccccCCCCH-HHHHHHHHHHHHhCCCCceeecCCchh-hHhhhh-C-CCcEEEEcCC
Q 023343 188 KYVLPDENIRGSLTLTFDE-ATNGVACNLDSR-GFHVLCKATEEVVGHVNPYSITGTLPL-IRELQD-E-GFDVQTAGYG 262 (283)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~-~~p~~~~~~d~~-~~~~l~~~~~~~~g~~~~~~~~gg~~d-a~~~~~-~-g~p~v~~g~g 262 (283)
.++++++++... .+|++.+++|++ +++.+++++++++|.++.....||++| +.+|.+ . |+|++.+|+|
T Consensus 364 -------~~g~~v~v~~~~~~~pp~~~~~n~~~l~~~~~~a~~~~~G~~~~~~~~gg~d~f~~~~~~~~Pg~p~v~~G~g 436 (472)
T 3pfe_A 364 -------PYNAKVDFKIQNGGSKGWNAPLLSDWLAKAASEASMTYYDKPAAYMGEGGTIPFMSMLGEQFPKAQFMITGVL 436 (472)
T ss_dssp -------GGGCEEEEEECSCCBCCEECCCCCHHHHHHHHHHHHHHHSSCCEEEEESSCCHHHHHHHHHCTTCEEEEECCB
T ss_pred -------CCCeEEEEEecCCCCCcccCCCCChHHHHHHHHHHHHHcCCCceeccCCCchhhHHHHHHHcCCCCEEEecCC
Confidence 125778888777 889998888888 678999999999997654555677553 576765 4 8999999987
Q ss_pred C-CccCCCCCcccchhhhhhh
Q 023343 263 L-MATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 263 ~-~~~~H~~nE~i~~~~l~~~ 282 (283)
. ...+|+|||++++++|.++
T Consensus 437 ~~~~~~H~p~E~i~~~~l~~g 457 (472)
T 3pfe_A 437 GPHSNAHGPNEFLHLDMVKKL 457 (472)
T ss_dssp CTTCCTTSTTCEEEHHHHHHH
T ss_pred CCCCCCcCCCcceeHHHHHHH
Confidence 5 4689999999999998764
No 14
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=100.00 E-value=1.2e-33 Score=249.50 Aligned_cols=227 Identities=18% Similarity=0.150 Sum_probs=179.0
Q ss_pred cccccccCCC---cee--EEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEE---ecCCCCCceeccCCceeEEEE
Q 023343 2 RKLGETKLKL---KST--VIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYW---IDTADKQPCIGTGGMIPWKLH 73 (283)
Q Consensus 2 ~~L~~~~~~~---~~~--i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~---~e~~~~~i~~~~~G~~~~~i~ 73 (283)
+.|++.+.++ +++ |.|+|+++||.++. .|++++++++ ++|++++ .+|++ ++++++|..+++|+
T Consensus 113 ~~l~~~~~~~~~~~g~~~v~~~~~~~EE~~g~--~G~~~~~~~~-----~~d~~i~~d~~~p~~--i~~~~~G~~~~~i~ 183 (364)
T 2rb7_A 113 RDRLNALKAAGRSQKDMALGLLITGDEEIGGM--NGAAKALPLI-----RADYVVALDGGNPQQ--VITKEKGIIDIKLT 183 (364)
T ss_dssp HHHHHHHHHTTCCGGGCCEEEEEESCGGGTST--TTHHHHGGGC-----EEEEEEECSSSBTTE--EEEEECEEEEEEEE
T ss_pred HHHHHhCCCCcccCCCccEEEEEEeccccCch--hhHHHHHhcC-----CCCEEEEccCCcccc--eEEEeeeEEEEEEE
Confidence 4566665556 568 99999999997431 6999998765 4678888 44554 88899999999999
Q ss_pred EeecCCCcCCCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCccccccccCCCcccceEEecCCCccceecCccEEEEEEEe
Q 023343 74 VTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (283)
Q Consensus 74 v~G~~~Hss~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~nviP~~~~~~~~~R~ 153 (283)
++|+++|+|.|+.|.||+..+++++..|+.+.. .+. . ..+..+++++.|+ +|.+.|+||++|++.+|+|+
T Consensus 184 v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~---~~~-----~-~~~~~~~~vg~i~-gG~~~NviP~~a~~~~~iR~ 253 (364)
T 2rb7_A 184 CTGKAAHGARPWMGVNAVDLLMEDYTRLKTLFA---EEN-----E-DHWHRTVNLGRIR-AGESTNKVPDVAEGWFNIRV 253 (364)
T ss_dssp EECBCEETTSGGGSBCHHHHHHHHHHHHHTTSC---CCC-----T-TCCSCEEEEEEEE-ECSCTTEECSEEEEEEEEEE
T ss_pred EEeecccCCCCCCCcCHHHHHHHHHHHHHhhcc---chh-----h-cCCCceEEEEEEe-cCCcCcccCcceEEEEEEee
Confidence 999999999999999999999999999987621 110 0 0024688999999 89999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhhhhhcccCCCCcccccCCCCcceeEEEEEcCCCCccccCCCCHHHHHHHHHHHHHhCC
Q 023343 154 TPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGH 233 (283)
Q Consensus 154 ~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~~~~~~~g~ 233 (283)
+|+++.+++.+.+++.++. +++ ...+|++.+++|+++++.+.++++ .+|.
T Consensus 254 ~~~~~~~~i~~~i~~~~~~----------------------------~v~-~~~~~~~~~~~~~~l~~~~~~~~~-~~g~ 303 (364)
T 2rb7_A 254 TEHDDPGALIDKIRKTVSG----------------------------TVS-IVRTVPVFLAADSPYTERLLALSG-ATAG 303 (364)
T ss_dssp CTTSCHHHHHHHHHHHCSS----------------------------EEE-EEEEECCEECCCCHHHHHHHHHHC-CEEE
T ss_pred CCCCCHHHHHHHHHHHhhh----------------------------hEE-eccCCccccCCCCHHHHHHHHHHH-hcCC
Confidence 9999988877777766431 222 234677777788999999999887 4553
Q ss_pred CCceeecCCchhhHhhhhCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 234 VNPYSITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 234 ~~~~~~~gg~~da~~~~~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
...|+ +|+++|...++|++.|||+.....|++||++++++|.++
T Consensus 304 ----~~~g~-~D~~~~~~~~~p~v~~Gp~~~~~~H~~~E~i~~~~l~~~ 347 (364)
T 2rb7_A 304 ----KAHGA-SDARYLGENGLTGVVWGAEGFNTLHSRDECLHIPSLQSI 347 (364)
T ss_dssp ----EESSC-CGGGGTGGGTCCEEECCCCCTTCTTSTTCEEETTHHHHH
T ss_pred ----CCCCC-chHHHHHhcCCCEEEECCCCccccCCCCccccHHHHHHH
Confidence 25666 588888877999999999865134999999999999764
No 15
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=100.00 E-value=2.6e-33 Score=252.93 Aligned_cols=235 Identities=15% Similarity=0.084 Sum_probs=186.1
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEEecCCC-CCceeccCCceeEEEEEeecCCC
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD-KQPCIGTGGMIPWKLHVTGKLFH 80 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~~e~~~-~~i~~~~~G~~~~~i~v~G~~~H 80 (283)
+.|++.+..++++|.|+|+++||+|. |++++.... +++|++++.|++. +.++++.+|..+++|+++|+++|
T Consensus 179 ~~L~~~~~~~~~~i~~if~~~EE~g~----Ga~~~~~~~----~~~d~~~~~d~~~~g~i~~~~~G~~~~~i~v~G~~~H 250 (434)
T 3ife_A 179 NYLIHNPQIKHGKIRVAFTPDEEIGR----GPAHFDVEA----FGASFAYMMDGGPLGGLEYESFNAAGAKLTFNGTNTH 250 (434)
T ss_dssp HHHHTCTTSCBCCEEEEEESCGGGTC----TGGGCCHHH----HCCSEEEECCCCSTTEEECCBCEEEEEEEEEECBCCC
T ss_pred HHHHhCCCCCCCCEEEEEECCcccCh----HHHHhhhhh----cCCCEEEEecCCCCCceeecCCCeEEEEEEEEEEecC
Confidence 56778877899999999999999873 888764332 3578999999875 57889999999999999999999
Q ss_pred cC-CCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCccccccccCCCcccceEEecCCCccceecCccEEEEEEEeCCCCCH
Q 023343 81 SG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNV 159 (283)
Q Consensus 81 ss-~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~nviP~~~~~~~~~R~~p~~~~ 159 (283)
|| .|+.|+||+..+++++..|+.+ ..+. ..+.+++.++ + +..|+||++|++.+++|++|+++.
T Consensus 251 ag~~P~~g~nAi~~aa~~i~~l~~~---~~~~-----------~~~~~~g~i~-~-g~~n~iP~~a~~~~diR~~~~~~~ 314 (434)
T 3ife_A 251 PGTAKNKMRNATKLAMEFNGHLPVE---EAPE-----------YTEGYEGFYH-L-LSLNGDVEQSKAYYIIRDFDRKNF 314 (434)
T ss_dssp GGGCTTTCBCHHHHHHHHHHTSCTT---CSGG-----------GCCTTCCEEE-E-EEEEECSSEEEEEEEEEESSHHHH
T ss_pred CCCCcccchhHHHHHHHHHHhcccc---cCCC-----------cceeeeEEEE-e-eeEeEecCeEEEEEEEecCCHHHH
Confidence 88 7999999999999999988664 1111 1344566776 3 358999999999999999998888
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccCCCCcccccCCCCcc-eeEEEEEcCCCCcc--ccCCCCHHHHHHHHHHHHHhCCCC-
Q 023343 160 TDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIR-GSLTLTFDEATNGV--ACNLDSRGFHVLCKATEEVVGHVN- 235 (283)
Q Consensus 160 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~--~~~~d~~~~~~l~~~~~~~~g~~~- 235 (283)
+++.+.|++.++...+. ++ +++++++...++++ .+++|+++++++++++++ +|.++
T Consensus 315 ~~i~~~i~~~~~~~~~~-------------------~g~~~~~v~~~~~~~~~~~~~~~d~~l~~~~~~a~~~-~G~~~~ 374 (434)
T 3ife_A 315 EARKNTIENIVKQMQEK-------------------YGQDAVVLEMNDQYYNMLEKIEPVREIVDIAYEAMKS-LNIEPN 374 (434)
T ss_dssp HHHHHHHHHHHHHHHHH-------------------HCGGGEEEEEEEEECCTHHHHGGGTHHHHHHHHHHHH-TTCCCE
T ss_pred HHHHHHHHHHHHHHHHh-------------------cCCceEEEEEeecccchhccccCCHHHHHHHHHHHHH-hCCCCE
Confidence 88888888777765432 12 34566665555653 466889999999999998 67553
Q ss_pred ceeecCCchhhHhhhhCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 236 PYSITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 236 ~~~~~gg~~da~~~~~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
...+.||+ |+++|...|+|++.||||. ..+|++||++++++|.++
T Consensus 375 ~~~~~ggt-D~~~~~~~GiP~~~~g~g~-~~~H~~~E~i~~~~l~~~ 419 (434)
T 3ife_A 375 IHPIRGGT-DGSQLSYMGLPTPNIFTGG-ENYHGKFEYVSVDVMEKA 419 (434)
T ss_dssp ECCBSSCC-HHHHHHHTTCCCCEECCSE-ESTTSTTCEEEHHHHHHH
T ss_pred EeecccCc-hHHHHhhCCCcEEEeCCCC-CCCcCCceeecHHHHHHH
Confidence 33456774 8999988899999999984 489999999999999765
No 16
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=100.00 E-value=7.3e-33 Score=253.17 Aligned_cols=254 Identities=14% Similarity=0.164 Sum_probs=192.0
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCC-CCceEEecCCCC-----CceeccCCceeEEEEEe
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLK-GGPLYWIDTADK-----QPCIGTGGMIPWKLHVT 75 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~-~d~~~~~e~~~~-----~i~~~~~G~~~~~i~v~ 75 (283)
+.|++.+..++++|.|+|+++||+|+ .|+..+++++. +.++ +|++++.+++.. .+.++++|..+++|+++
T Consensus 160 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~g~~~~~~~~~-~~~~~~d~~i~~~~~~~~~~~~~i~~~~~G~~~~~i~v~ 235 (481)
T 2pok_A 160 RKYMQHHDDLPVNISFIMEGAEESAS---TDLDKYLEKHA-DKLRGADLLVWEQGTKNALEQLEISGGNKGIVTFDAKVK 235 (481)
T ss_dssp HHHHHTCSSCSSEEEEEEESCGGGTT---TTHHHHHHHHH-HHHTTCSEEECSCCBBCTTSCEEEECCBCEEEEEEEEEE
T ss_pred HHHHHhcCCCCCCEEEEEecccccCc---hhHHHHHHHhH-hhccCCCEEEECCCCccCCCCeeEEEecceeEEEEEEEe
Confidence 45676655789999999999999987 69988887642 1123 788998887532 46679999999999999
Q ss_pred ecC--CCcCCCCCCCCHHHHHHHHHHHHHhhhcC--------CCCCCCc------cc---------------------cc
Q 023343 76 GKL--FHSGLPHKAINPLELAMEALKVIQTRFYK--------DFPPHPK------EQ---------------------VY 118 (283)
Q Consensus 76 G~~--~Hss~p~~g~nai~~~~~~l~~l~~~~~~--------~~~~~~~------~~---------------------~~ 118 (283)
|++ +||+.|+.|.||+..+++++..|+....+ ...+... .. ..
T Consensus 236 G~~g~~Hss~p~~g~nAi~~~a~~i~~l~~~~~~i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (481)
T 2pok_A 236 SADVDIHSSYGGVVESAPWYLLQALQSLRAADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEE 315 (481)
T ss_dssp CSSSCEEGGGTTTBCCHHHHHHHHHHHTBCTTSCBCCTTTGGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCS
T ss_pred cCCCCccccCCCCCCCHHHHHHHHHHHhhCCCCceeccchhhcCCCCCHHHHHHHHhcCcccHHHHHHhhCccccccccc
Confidence 999 89999999999999999999988654200 0000000 00 00
Q ss_pred cc------cCCCcccceEEecCCC----ccceecCccEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhhhhhcccCCCCcc
Q 023343 119 GF------ETPSTMKPTQWSYPGG----GINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSK 188 (283)
Q Consensus 119 ~~------~~~~~~~~~~i~~~g~----~~nviP~~~~~~~~~R~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 188 (283)
++ ....+++++.|+ +|. ..|+||++|++.+++|++|+++.+++.+++++.++....
T Consensus 316 g~~~~~~~~~~~t~~vg~i~-gG~~~~~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~------------- 381 (481)
T 2pok_A 316 RMAFLKRFFFDPALNIEGIQ-SGYQGQGVKTILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGF------------- 381 (481)
T ss_dssp HHHHHHHHHHSCEEEEEEEE-EECCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-------------
T ss_pred chhHHHHHhhcCeEeEEeee-cCCCCCCCCeeccCeeEEEEEEEeCCCCCHHHHHHHHHHHHHhhCC-------------
Confidence 00 023588999999 654 689999999999999999999999999999998876421
Q ss_pred cccCCCCcceeEEEEEcCCCCccccCCCCHHHHHHHHHHHHHhCCCC-ceeecCCchhhHhhhh-CCCcEEEEcCCC-Cc
Q 023343 189 YVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN-PYSITGTLPLIRELQD-EGFDVQTAGYGL-MA 265 (283)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~~~~~~~g~~~-~~~~~gg~~da~~~~~-~g~p~v~~g~g~-~~ 265 (283)
.+++++ +...+|++.+++|+++++.+.+++++++|.++ .....||++|+++|.+ .|+|++.||||. ..
T Consensus 382 -------~~~~v~--~~~~~p~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~gg~~D~~~~~~~~g~p~v~~G~g~~~~ 452 (481)
T 2pok_A 382 -------DKVELY--YTLGEMSYRSDMSAPAILNVIELAKKFYPQGVSVLPTTAGTGPMHTVFDALEVPMVAFGLGNANS 452 (481)
T ss_dssp -------TTEEEE--EEEEECCBCCCSCSHHHHHHHHHHTTTCTTCEEEESCBSSCCTHHHHHHHHCCCEEBCCSBCTTC
T ss_pred -------CceEEE--EccCCCcccCCCCCHHHHHHHHHHHHHcCCCccccccCCCCCchHHHHHHcCCCEEEecCCCccc
Confidence 134444 44568888888899999999999999888654 3344555435555554 699999999986 47
Q ss_pred cCCCCCcccchhhhhhh
Q 023343 266 TYHADNEYCLLSDIRLT 282 (283)
Q Consensus 266 ~~H~~nE~i~~~~l~~~ 282 (283)
.+|++||++++++|.++
T Consensus 453 ~~H~~~E~i~i~~l~~~ 469 (481)
T 2pok_A 453 RDHGGDENVRIADYYTH 469 (481)
T ss_dssp CTTSTTCEEEHHHHHHH
T ss_pred CCCCCCCcEEHHHHHHH
Confidence 89999999999999864
No 17
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=100.00 E-value=7.3e-32 Score=246.48 Aligned_cols=258 Identities=14% Similarity=0.116 Sum_probs=194.4
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccc-cCCCCceEEecCC-----CCCceeccCCceeEEEEEe
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLN-KLKGGPLYWIDTA-----DKQPCIGTGGMIPWKLHVT 75 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~-~~~~d~~~~~e~~-----~~~i~~~~~G~~~~~i~v~ 75 (283)
+.|++.+.+++++|.|+|+++||.|+ .|++.+++++... ..++|++++.|+. .+.++++++|..+++|+++
T Consensus 149 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~Ga~~~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~i~~~~~G~~~~~i~v~ 225 (479)
T 2zog_A 149 EAYQKTGQEIPVNLRFCLEGMEESGS---EGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVE 225 (479)
T ss_dssp HHHHHTTCCCSSEEEEEEESCGGGTC---TTHHHHHHHTTTTTTTTCCEEEECCCBCSSSSSCEEEEEECEEEEEEEEEE
T ss_pred HHHHHhCCCCCCcEEEEEecccccCC---ccHHHHHHhhhhhhcccCCEEEEeCCCcCCCCCeEEEEecceEEEEEEEEE
Confidence 56777787899999999999999987 7999999875211 0146899998863 3347789999999999999
Q ss_pred ecC--CCcCCCCCCCCHHHHHHHHHHHHHhhhcCC-----------CCCCCcc-----cccccc----------------
Q 023343 76 GKL--FHSGLPHKAINPLELAMEALKVIQTRFYKD-----------FPPHPKE-----QVYGFE---------------- 121 (283)
Q Consensus 76 G~~--~Hss~p~~g~nai~~~~~~l~~l~~~~~~~-----------~~~~~~~-----~~~~~~---------------- 121 (283)
|++ +|||.+ |.||+..+++++..|+.+.... +.+..+. ....+.
T Consensus 226 G~~~~~Hs~~~--g~~ai~~~~~~i~~l~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 303 (479)
T 2zog_A 226 CSDKDLHSGVY--GGSVHEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHS 303 (479)
T ss_dssp CCSSCEEHHHH--TTTSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCS
T ss_pred eCCCCCccCCC--CCCccCHHHHHHHHHHhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCcccccc
Confidence 999 999985 7899999999999887653221 0000000 000000
Q ss_pred ----------CCCcccceEEecCC----CccceecCccEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhhhhhcccCCCCc
Q 023343 122 ----------TPSTMKPTQWSYPG----GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVS 187 (283)
Q Consensus 122 ----------~~~~~~~~~i~~~g----~~~nviP~~~~~~~~~R~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 187 (283)
...+++++.|+ +| .+.|+||++|++.+++|++|+++.+++.+++++.++...+..
T Consensus 304 ~~~~~~~~~~~~~~~~v~~i~-gg~~g~~~~NvIP~~a~~~~~~R~~~~~~~~~v~~~i~~~~~~~~~~~---------- 372 (479)
T 2zog_A 304 CKKDILMHRWRYPSLSLHGIE-GAFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKFAEL---------- 372 (479)
T ss_dssp SHHHHHHHHHTSCEEEEEEEE-SSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTT----------
T ss_pred chHHHHHHhhcCCCeEEeeee-cCCcCCCCccccCCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhcc----------
Confidence 13578888998 66 789999999999999999999999999999999988765321
Q ss_pred ccccCCCCcceeEEEEEcCCCCccccCCCCHHHHHHHHHHHHHhCCCCceeecCCchhh-Hhhhh-CCCcEEEEcCCC-C
Q 023343 188 KYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPYSITGTLPLI-RELQD-EGFDVQTAGYGL-M 264 (283)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~gg~~da-~~~~~-~g~p~v~~g~g~-~ 264 (283)
..+.++++++...+|++.+++|+++++.+.+++++++|.++.+...+|++|+ .+|.+ .|+|++.+|+|+ .
T Consensus 373 -------~~~~~~~~~~~~~~p~~~~~~d~~~~~~~~~a~~~~~g~~~~~~~~~gs~d~~~~~~~~~~~p~~~~g~g~~~ 445 (479)
T 2zog_A 373 -------QSPNKFKVYMGHGGKPWVSDFNHPHYQAGRRALKTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSAD 445 (479)
T ss_dssp -------CCCSEEEEEEEEEECCEECCTTSHHHHHHHHHHHHHHSSCCEEEEESSCCTHHHHHHHHHCSEEEECCCBCTT
T ss_pred -------CCCceEEEEecCCCCceecCCCCHHHHHHHHHHHHHhCCCceecCCCCccchHHHHHHHhCCCEEEecCCCCc
Confidence 0124566666667888888889999999999999998876544333443575 56665 589999875554 3
Q ss_pred ccCCCCCcccchhhhhhh
Q 023343 265 ATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 265 ~~~H~~nE~i~~~~l~~~ 282 (283)
..+|++||++++++|.++
T Consensus 446 ~~~H~~~E~i~~~~l~~~ 463 (479)
T 2zog_A 446 DGAHSQNEKLNRLNYIEG 463 (479)
T ss_dssp CCTTSTTCEEEHHHHHHH
T ss_pred cCCCCCCCcEeHHHHHHH
Confidence 579999999999998764
No 18
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=99.98 E-value=5.7e-31 Score=240.77 Aligned_cols=255 Identities=16% Similarity=0.159 Sum_probs=189.9
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccC--CCCceEEecCCC-----CCceeccCCceeEEEEE
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKL--KGGPLYWIDTAD-----KQPCIGTGGMIPWKLHV 74 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~--~~d~~~~~e~~~-----~~i~~~~~G~~~~~i~v 74 (283)
++|++.+.+++++|.|+|+++||+|+ .|++.+++++. +.+ ++|++++.|+.. ..+.++.+|..+++|++
T Consensus 156 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~g~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v 231 (485)
T 3dlj_A 156 SAFRALEQDLPVNIKFIIEGMEEAGS---VALEELVEKEK-DRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEV 231 (485)
T ss_dssp HHHHHTTCCCSSEEEEEEESCGGGTT---TTHHHHHHHHT-TTTSTTCCEEEECCCBCCC--CCEEEEEECEEEEEEEEE
T ss_pred HHHHHhCCCCCccEEEEEEcccccCC---ccHHHHHHhhh-hhcccCCCEEEEcCCCccCCCCeeEEEeccceEEEEEEE
Confidence 56778888899999999999999987 79999998763 111 578999999753 34668999999999999
Q ss_pred eecCC--CcCCCCCCCCHHHHHHHHHHHHHhhhcCC-----------CCCCCcc-----cccccc---------------
Q 023343 75 TGKLF--HSGLPHKAINPLELAMEALKVIQTRFYKD-----------FPPHPKE-----QVYGFE--------------- 121 (283)
Q Consensus 75 ~G~~~--Hss~p~~g~nai~~~~~~l~~l~~~~~~~-----------~~~~~~~-----~~~~~~--------------- 121 (283)
+|+++ |+|. .|.||+..+..++..|..+..+. +.|..+. ....|.
T Consensus 232 ~G~~~~~H~~~--~g~~a~~~~~~l~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 309 (485)
T 3dlj_A 232 KCRDQDFHSGT--FGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLF 309 (485)
T ss_dssp ESCSSCEETTT--STTSSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCSC
T ss_pred EECCCCCcCCC--CCccccCHHHHHHHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCcccc
Confidence 99999 9997 35555555555555555432111 1111000 000010
Q ss_pred -----------CCCcccceEEecCC----CccceecCccEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhhhhhcccCCCC
Q 023343 122 -----------TPSTMKPTQWSYPG----GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPV 186 (283)
Q Consensus 122 -----------~~~~~~~~~i~~~g----~~~nviP~~~~~~~~~R~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~ 186 (283)
...+++++.|+ +| ++.||||++|++.+++|+++.++.+++.+.|++.++..+..
T Consensus 310 ~~~~~~~~~~~~~~~~~v~~i~-gG~~gp~a~NVIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~---------- 378 (485)
T 3dlj_A 310 DTKEEILMHLWRYPSLSIHGIE-GAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSK---------- 378 (485)
T ss_dssp SSHHHHHHHHHTSCEEEEEEEE-SSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHT----------
T ss_pred cchHHHHHHHhcCCceEEEEEe-cCCcCCCCCceeCCeeEEEEEEEcCCCCCHHHHHHHHHHHHHHhccc----------
Confidence 14578999999 77 88999999999999999999999999999999998876532
Q ss_pred cccccCCCCcc--eeEEEEEcCCCCccccCCCCHHHHHHHHHHHHHhCCCCce-eecCCchhhHhhhh-CCCcEEEEcCC
Q 023343 187 SKYVLPDENIR--GSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPY-SITGTLPLIRELQD-EGFDVQTAGYG 262 (283)
Q Consensus 187 ~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~d~~~~~~l~~~~~~~~g~~~~~-~~~gg~~da~~~~~-~g~p~v~~g~g 262 (283)
++ +++++++...+|++.+++|+++++.+.+++++++|..+.. .++|++|++.+|.+ .++|++.+|+|
T Consensus 379 ---------~g~~~~~~v~~~~~~pp~~~~~d~~~~~~~~~a~~~~~G~~~~~~~~ggs~Dfa~~~~~~~p~~~i~~g~g 449 (485)
T 3dlj_A 379 ---------RNSSNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEPDMIRDGSTIPIAKMFQEIVHKSVVLIPLG 449 (485)
T ss_dssp ---------TCCSSEEEEEEEEEECCEECCTTSHHHHHHHHHHHHHHSSCCEEEEESSCCHHHHHHHHHTC--CEECCCB
T ss_pred ---------cCCCeeEEEEEcCCCCceeCCCCCHHHHHHHHHHHHHhCCCceecCCCCchhHHHHHHHHhCCCEEEecCC
Confidence 12 3677777777899988888999999999999998975433 34556444666665 67888878887
Q ss_pred C-CccCCCCCcccchhhhhhh
Q 023343 263 L-MATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 263 ~-~~~~H~~nE~i~~~~l~~~ 282 (283)
. ....|++||++++++|..+
T Consensus 450 ~~~~~~H~p~E~i~~~~l~~g 470 (485)
T 3dlj_A 450 AVDDGEHSQNEKINRWNYIEG 470 (485)
T ss_dssp CTTCCTTSTTCEEEHHHHHHH
T ss_pred CCCCCCcCCCCCccHHHHHHH
Confidence 5 3679999999999998764
No 19
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=99.97 E-value=3.4e-31 Score=241.53 Aligned_cols=242 Identities=13% Similarity=0.020 Sum_probs=185.1
Q ss_pred cccccccCCCceeEEEEEEecccc-----CCCCCcCHHHHHHcccc-------c----------------c---------
Q 023343 2 RKLGETKLKLKSTVIAVFIASEEN-----SAITGVGVDALVKDGLL-------N----------------K--------- 44 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~-----g~~~~~G~~~l~~~~~~-------~----------------~--------- 44 (283)
+.|++.+.+++++|.|+|+++||+ |+ .|++.+...... + +
T Consensus 137 ~~L~~~~~~~~~~v~lif~~dEE~~~~~~g~---~Gs~~l~~~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~~~~~ 213 (474)
T 2v8h_A 137 RTFKDNNYVPNYDVCVVVWFNAEGARFARSC---TGSSVWSHDLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPASY 213 (474)
T ss_dssp HHHHHHTCCCSSCEEEEECTTCSCSSSSCTT---HHHHHHTTSSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSBCSCT
T ss_pred HHHHHcCCCCCCCEEEEEECCccCCCCCCCc---ccHHHHHhccCHhhhhhhcccccccCccHHHHHHhcCCcccccccc
Confidence 567788888999999999999998 33 588888652110 0 0
Q ss_pred --CCCCceEEecCCC----------CCceeccCCceeEEEEEeecCCCcC-CCC-CCCCHHHHHHHHHHHHHhhhcCCCC
Q 023343 45 --LKGGPLYWIDTAD----------KQPCIGTGGMIPWKLHVTGKLFHSG-LPH-KAINPLELAMEALKVIQTRFYKDFP 110 (283)
Q Consensus 45 --~~~d~~~~~e~~~----------~~i~~~~~G~~~~~i~v~G~~~Hss-~p~-~g~nai~~~~~~l~~l~~~~~~~~~ 110 (283)
.+.|.++..|..+ ..++.+.+|..+++|+++|+++||| .|+ .|.||+..|++++..|+.+..+.
T Consensus 214 ~~e~~~~~~~lHi~~g~~l~~~g~~~~i~~~~~G~~~~~i~v~G~~~Hsg~~P~~~g~nAi~~~a~~i~~l~~~~~~~-- 291 (474)
T 2v8h_A 214 KENEIDAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTVHGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQRH-- 291 (474)
T ss_dssp TTSCCSEEEEEEECCSSHHHHTTCSEEEEEEECEEEEEEEEEECCCEETTTCCGGGCCCHHHHHHHHHHHHHHHHHHT--
T ss_pred cccchhhheeeeeccCccccccCCcceeEEeecceEEEEEEEEeecCCCCCCCcccCCCHHHHHHHHHHHHHHHHhhc--
Confidence 1233444443221 2345688999999999999999999 597 89999999999999998754321
Q ss_pred CCCccccccccCCCcccceEEecCC-CccceecCccEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhhhhhcccCCCCccc
Q 023343 111 PHPKEQVYGFETPSTMKPTQWSYPG-GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKY 189 (283)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~~g-~~~nviP~~~~~~~~~R~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~ 189 (283)
..+++++.|+ +| .+.|+||++|++.+|+|++|+++.+++.+++++.++......
T Consensus 292 ------------~~t~~vg~i~-gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~------------ 346 (474)
T 2v8h_A 292 ------------NGLFTCGIID-AKPYSVNIIPGEVSFTLDFRHPSDDVLATMLKEAAAEFDRLIKIN------------ 346 (474)
T ss_dssp ------------TCEEECCCEE-EESCCTTEECSEEEEEEEEEESCHHHHHHHHHHHHHHHHHHTTCC------------
T ss_pred ------------CCEEEEEEEE-ecCCCCceeCCEEEEEEEecCCChHHHHHHHHHHHHHHHHHHhhc------------
Confidence 2588999999 66 899999999999999999998888888888877776542110
Q ss_pred ccCCCCcceeEEEEEcCCCCccccCCCCHHHHHHHHHHHHHhC-C-C-CceeecCCchhhHhhhhCCCcE-EEEcCCCCc
Q 023343 190 VLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVG-H-V-NPYSITGTLPLIRELQDEGFDV-QTAGYGLMA 265 (283)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~~~~~~~g-~-~-~~~~~~gg~~da~~~~~~g~p~-v~~g~g~~~ 265 (283)
...+++++++....+|++. .|+++++.+.++++++ | . + .+..+.||+ |+.+|... +|+ +.|||+..+
T Consensus 347 ----~~~g~~~~~~~~~~~~~~~--~d~~l~~~~~~a~~~~-G~~~~~~~~~~~ggt-D~~~~~~~-~P~~~~fgp~~~~ 417 (474)
T 2v8h_A 347 ----DGGALSYESETLQVSPAVN--FHEVCIECVSRSAFAQ-FKKDQVRQIWSGAGH-DSCQTAPH-VPTSMIFIPSKDG 417 (474)
T ss_dssp ----TTCCCEEEEEEEEEECCEE--CCHHHHHHHHHHHHHH-SCGGGEEEEEESSCC-THHHHTTT-SCEEEEEECCGGG
T ss_pred ----ccCCcEEEEEEecCCCCcc--CCHHHHHHHHHHHHHc-CCCCcceecCCcCCc-cHHHHHhh-CCEEEEEeCCCCC
Confidence 0034677777766788875 5789999999999998 7 4 3 345567775 88888876 898 788998666
Q ss_pred cCCCCCcccchhhhhhh
Q 023343 266 TYHADNEYCLLSDIRLT 282 (283)
Q Consensus 266 ~~H~~nE~i~~~~l~~~ 282 (283)
.+|++||++++++|.++
T Consensus 418 ~~H~p~E~i~~~~l~~~ 434 (474)
T 2v8h_A 418 LSHNYYEYSSPEEIENG 434 (474)
T ss_dssp CCSSTTCCCCHHHHHHH
T ss_pred CCCCccccCCHHHHHHH
Confidence 79999999999999764
No 20
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=99.97 E-value=6.6e-31 Score=235.47 Aligned_cols=240 Identities=17% Similarity=0.112 Sum_probs=184.5
Q ss_pred cccccccCCCceeEEEEEEeccccC-----CCCCcCHHHHHHc------------cc---------------c-----cc
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENS-----AITGVGVDALVKD------------GL---------------L-----NK 44 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g-----~~~~~G~~~l~~~------------~~---------------~-----~~ 44 (283)
+.|++.+.+++++|.|+|+++||.+ . .|++.++.. |. + +.
T Consensus 103 ~~l~~~~~~~~~~i~~~~~~~EE~~~~~~g~---~Gs~~~~~~~~~~~~~~~~~~G~~~~~~l~~~G~~~~~~~~~~~~~ 179 (408)
T 3n5f_A 103 QTMNEHGVVTHHPIEVVAFTDEEGARFRFGM---IGSRAMAGTLPPEALECRDAEGISLAEAMKQAGLDPDRLPQAARKP 179 (408)
T ss_dssp HHHHHTTCCCSSCEEEEEESCSSCTTTTCCC---HHHHHHHTCCCGGGGSCBCTTCCBHHHHHHHTTCCGGGGGGGCCCT
T ss_pred HHHHHcCCCCCCCEEEEEEcCccccccCCCC---cCHHHHHcCCCHHHhhccCCCCCCHHHHHHHhCCChhhhhhcccCc
Confidence 5677788889999999999999963 3 588988731 11 0 11
Q ss_pred CCCCceEEecCCCC----------CceeccCCceeEEEEEeecCCCc-CCC-CCCCCHHHHHHHHHHHHHhhhcCCCCCC
Q 023343 45 LKGGPLYWIDTADK----------QPCIGTGGMIPWKLHVTGKLFHS-GLP-HKAINPLELAMEALKVIQTRFYKDFPPH 112 (283)
Q Consensus 45 ~~~d~~~~~e~~~~----------~i~~~~~G~~~~~i~v~G~~~Hs-s~p-~~g~nai~~~~~~l~~l~~~~~~~~~~~ 112 (283)
.++|.++..|..++ .++.+++|..+++|+++|+++|+ +.| +.|+||+..+++++..|+.+. +.++
T Consensus 180 ~~~~~~~~lhi~~g~~le~~~~~~gi~~~~~g~~~~~i~v~G~~~Hags~P~~~g~nAi~~aa~~i~~l~~~~-~~~~-- 256 (408)
T 3n5f_A 180 GTVKAYVELHIEQGRVLEETGLPVGIVTGIAGLIWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEA-RRTG-- 256 (408)
T ss_dssp TTEEEEEEEEECSSSHHHHHTCSEEEEEEECEEEEEEEEEECCCEETTTSCTTTCCCHHHHHHHHHHHHHHHH-HHHS--
T ss_pred cCccEEEEEeeccchhHHHcCCCeEEEEEeccceEEEEEEEEEcCcCCCCccccccCHHHHHHHHHHHHHHHH-HhcC--
Confidence 13455665554322 34568999999999999999999 589 589999999999999998764 2211
Q ss_pred CccccccccCCCcccceEEecCC-CccceecCccEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhhhhhcccCCCCccccc
Q 023343 113 PKEQVYGFETPSTMKPTQWSYPG-GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVL 191 (283)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~i~~~g-~~~nviP~~~~~~~~~R~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 191 (283)
+.+++++.|+ +| .+.|+||++|++.+++|++|.++.+++.+++++.++.....
T Consensus 257 ----------~~~~~vg~i~-gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~a~~--------------- 310 (408)
T 3n5f_A 257 ----------TTVGTVGQLH-VYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAKE--------------- 310 (408)
T ss_dssp ----------SCEEEEEEEE-EESCCTTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHH---------------
T ss_pred ----------CcEEEEEEEE-ecCCCCcCcCCeEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHH---------------
Confidence 3688999999 65 89999999999999999999777777777777777654322
Q ss_pred CCCCcceeEEEEEcCCCCccccCCCCHHHHHHHHHHHHHhCCC-CceeecCCchhhHhhhhCCCcE-EEEcCCCCccCCC
Q 023343 192 PDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHV-NPYSITGTLPLIRELQDEGFDV-QTAGYGLMATYHA 269 (283)
Q Consensus 192 ~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~~~~~~~g~~-~~~~~~gg~~da~~~~~~g~p~-v~~g~g~~~~~H~ 269 (283)
+++++++++...+|++. .|.++++.++++++++ |.+ ....+.||+ |+++|.+. +|+ +.|+|+..+.+|+
T Consensus 311 ----~g~~~~i~~~~~~p~~~--~d~~l~~~~~~a~~~~-g~~~~~~~~~ggt-D~~~~~~~-iP~~~~~~~~~~~~~H~ 381 (408)
T 3n5f_A 311 ----RNVRVTTERLQEMPPVL--CSDEVKRAAEAACQKL-GYPSFWLPSGAAH-DSVQLAPI-CPIGMIFVRSQDGVSHS 381 (408)
T ss_dssp ----HTCEEEEEEEEEECCEE--CCHHHHHHHHHHHHHH-TCCCCEEEESSCC-TTTTTTTT-SCEEEEEECCGGGCCSS
T ss_pred ----hCCeEEEEEecCCCCcC--CCHHHHHHHHHHHHHc-CCCcccCCCcCch-HHHHHHHH-CCEEEEEeCCCCCCCCC
Confidence 24677888777788865 6789999999999997 754 344567775 88888776 998 5677776567999
Q ss_pred CCcccchhhhhhh
Q 023343 270 DNEYCLLSDIRLT 282 (283)
Q Consensus 270 ~nE~i~~~~l~~~ 282 (283)
+||++++++|..+
T Consensus 382 ~~E~i~~~~l~~~ 394 (408)
T 3n5f_A 382 PAEWSTKEDCAAG 394 (408)
T ss_dssp TTCCCCHHHHHHH
T ss_pred ccccCCHHHHHHH
Confidence 9999999998764
No 21
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=99.97 E-value=4.8e-31 Score=237.44 Aligned_cols=244 Identities=14% Similarity=0.067 Sum_probs=184.2
Q ss_pred cccccccCCCceeEEEEEEeccccCCC--CCcCHHHHHHc----cccc----------------cC-----------CCC
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAI--TGVGVDALVKD----GLLN----------------KL-----------KGG 48 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~--~~~G~~~l~~~----~~~~----------------~~-----------~~d 48 (283)
+.|++.+.+++++|.|+|+++||.++- ...|++.+... ...+ +. +.|
T Consensus 107 ~~l~~~~~~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~G~~~~~~~p~~~~~~~ 186 (423)
T 1z2l_A 107 DWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIK 186 (423)
T ss_dssp HHHHHHHCSCSEEEEEEEESCSSCCSSSCSCHHHHHHTTCCCGGGTSSCCCSSSCCHHHHHHHTTCCCCSSCCCCCCCEE
T ss_pred HHHHHcCCCCCCCEEEEEEcCccccccCCCcccHHHHHcCCCHHHHhhhcCcCCcCHHHHHHHcCCccccccccCCCCce
Confidence 567777888999999999999998520 00488888762 2111 00 123
Q ss_pred ceEEecCCC----------CCceeccCCceeEEEEEeecCCCcC-CCC-CCCCHHHHHHHHHHHHHhhhcCCCCCCCccc
Q 023343 49 PLYWIDTAD----------KQPCIGTGGMIPWKLHVTGKLFHSG-LPH-KAINPLELAMEALKVIQTRFYKDFPPHPKEQ 116 (283)
Q Consensus 49 ~~~~~e~~~----------~~i~~~~~G~~~~~i~v~G~~~Hss-~p~-~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~ 116 (283)
.++..|..+ ..++.+.+|..+++|+++|+++||| .|+ .|.||+..+++++..|+++..+ ..+
T Consensus 187 ~~~~~h~~~~~~~e~~~~~~~~~~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~~a~~i~~l~~~~~~-~~~----- 260 (423)
T 1z2l_A 187 AFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKR-MGD----- 260 (423)
T ss_dssp EEEEEEECCSSHHHHTTCCEEEEEEECEEEEEEEEEECCCEETTTSCGGGCCCHHHHHHHHHHHHHHHHHH-HCT-----
T ss_pred EEEEEEeccCchHHHCCCCeEEEeeEecceEEEEEEEeEcCCCCCCccccCcCHHHHHHHHHHHHHHHHHh-cCC-----
Confidence 444333221 2345689999999999999999999 695 8999999999999999876432 111
Q ss_pred cccccCCCcccceEEecCC-CccceecCccEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhhhhhcccCCCCcccccCCCC
Q 023343 117 VYGFETPSTMKPTQWSYPG-GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDEN 195 (283)
Q Consensus 117 ~~~~~~~~~~~~~~i~~~g-~~~nviP~~~~~~~~~R~~p~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (283)
..+++++.|+ +| .+.|+||++|++.+|+|++|+++.+++.+.+++.++...+.
T Consensus 261 ------~~~~~vg~i~-gg~~~~NvIP~~a~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~------------------- 314 (423)
T 1z2l_A 261 ------PLVLTFGKVE-PRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDE------------------- 314 (423)
T ss_dssp ------TCEEECCCEE-EESCCTTEECCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHH-------------------
T ss_pred ------CceEEEEEEe-ecCCcceeECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 3578899999 64 89999999999999999999888777777777777654322
Q ss_pred cceeEEEEEcCCCCccccCCCCHHHHHHHHHHHHHhCCCC-ceeecCCchhhHhhhhCCCcE-EEEcCCCCccCCCCCcc
Q 023343 196 IRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN-PYSITGTLPLIRELQDEGFDV-QTAGYGLMATYHADNEY 273 (283)
Q Consensus 196 ~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~~~~~~~g~~~-~~~~~gg~~da~~~~~~g~p~-v~~g~g~~~~~H~~nE~ 273 (283)
++++++++....+|++. .|+++++.+.++++++ |.++ +..+.||+ |+++|.+. +|+ +.|||+....+|++||+
T Consensus 315 ~g~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~-g~~~~~~~~~ggt-D~~~~~~~-~p~~~~~~p~~~~~~H~~~E~ 389 (423)
T 1z2l_A 315 MDIGIDIDLWMDEEPVP--MNKELVATLTELCERE-KLNYRVMHSGAGH-DAQIFAPR-VPTCMIFIPSINGISHNPAER 389 (423)
T ss_dssp HTCEEEEEEEEEECCEE--CCHHHHHHHHHHHHHT-TCCEEEEEESSCC-THHHHTTT-SCEEEEEECCGGGCCSSTTCC
T ss_pred hCCeEEEEEecCCCCcc--CCHHHHHHHHHHHHHc-CCCeEEecCCCcc-cHHHHHhh-CCEEEEEeCCCCCCCCCcccc
Confidence 24567777666778876 5789999999999997 7543 44567775 88888876 888 57889866679999999
Q ss_pred cchhhhhhh
Q 023343 274 CLLSDIRLT 282 (283)
Q Consensus 274 i~~~~l~~~ 282 (283)
+++++|.++
T Consensus 390 i~~~~l~~~ 398 (423)
T 1z2l_A 390 TNITDLAEG 398 (423)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 999999865
No 22
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=99.97 E-value=6.3e-31 Score=234.39 Aligned_cols=238 Identities=13% Similarity=0.064 Sum_probs=183.9
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHH-HHHHccccccCCCCceEEecCCCC-CceeccCCceeEEEEEeecCC
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVD-ALVKDGLLNKLKGGPLYWIDTADK-QPCIGTGGMIPWKLHVTGKLF 79 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~-~l~~~~~~~~~~~d~~~~~e~~~~-~i~~~~~G~~~~~i~v~G~~~ 79 (283)
+.|++.+.+++++|.|+|+++||.++. .|++ .|++.+++++ +|+++..|+++. .+..+.+|..+++|+++|+++
T Consensus 107 ~~L~~~~~~~~g~v~~~f~~~EE~~~~--~Ga~~~~~~~g~~~~--~d~~~~~h~~~~~~~~~~~~g~~~~~i~v~Gk~~ 182 (394)
T 3ram_A 107 IGLKQVIDQIGGKVVVLGCPAEEGGEN--GSAKASYVKAGVIDQ--IDIALMIHPGNETYKTIDTLAVDVLDVKFYGKSA 182 (394)
T ss_dssp HHHHTTHHHHCSEEEEEECCCTTCCTT--CCHHHHHHHHTGGGG--CSEEECCEEESSBBCCCCBCEEEEEEEEEECBCC
T ss_pred HHHHHhHhhCCceEEEEEECCccCCCC--CchHHHHHHcCCccc--CCEEEEECCccccCCCccccceeEEEEEEEcccc
Confidence 456776667899999999999998721 5999 9999887664 679999998774 567789999999999999999
Q ss_pred CcC-CCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCccccccccCCCcccceEEecCCCccceecCccEEEEEEEeCCCCC
Q 023343 80 HSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYN 158 (283)
Q Consensus 80 Hss-~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~nviP~~~~~~~~~R~~p~~~ 158 (283)
|+| .|+.|+||+..++++++.|+.+.. ..+. ..+++++.++ +|.+.|+||++|++.+++|..+.++
T Consensus 183 Ha~~~P~~g~nAi~~a~~~i~~l~~l~~-~~~~-----------~~~~~~~~i~-gG~~~NvIP~~a~~~~~iR~~~~~~ 249 (394)
T 3ram_A 183 HASENADEALNALDAMISYFNGVAQLRQ-HIKK-----------DQRVHGVILD-GGKAANIIPDYTHARFYTRAMTRKE 249 (394)
T ss_dssp BHHHHGGGCBCHHHHHHHHHHHHHHHGG-GSCT-----------TCEEEEEEEE-BCSCTTBCCSEEEEEEEEEESSHHH
T ss_pred ccCCCCcCCCCHHHHHHHHHHHHHHHHh-hCCC-----------CCeeEEEEEE-CCCCCceeCCeEEEEEEEeeCCHHH
Confidence 999 899999999999999999988632 2111 1355667787 9999999999999999999999766
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccCCCCcccccCCCCcceeEEEEE-cCCCCccccCCCCHHHHHHHHHHHHHhCCCC--
Q 023343 159 VTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTF-DEATNGVACNLDSRGFHVLCKATEEVVGHVN-- 235 (283)
Q Consensus 159 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~d~~~~~~l~~~~~~~~g~~~-- 235 (283)
.+++.++|++.++.... .+++++++++ ...+|+.. +|.++++.+++++++ .|...
T Consensus 250 ~~~i~~~i~~~~~~~a~-------------------~~g~~~ei~~~~~~~~~~~--~d~~l~~~~~~a~~~-~G~~~~~ 307 (394)
T 3ram_A 250 LDILTEKVNQIARGAAI-------------------QTGCDYEFGPIQNGVNEFI--KTPKLDDLFAKYAEE-VGEAVID 307 (394)
T ss_dssp HHHHHHHHHHHHHHHHH-------------------HHTCEEEEEESSCCBCCCC--CCHHHHHHHHHHHHH-TTCCBCC
T ss_pred HHHHHHHHHHHHHHHHH-------------------HhCCeEEEEEecCCCCCcc--CCHHHHHHHHHHHHH-hCccccc
Confidence 66666666666665432 2357888888 67788754 688999999999988 56432
Q ss_pred ceeecCCchhhHhhhhCCCcEEEE--cCCC-CccCCCCCccc-------chhhhhh
Q 023343 236 PYSITGTLPLIRELQDEGFDVQTA--GYGL-MATYHADNEYC-------LLSDIRL 281 (283)
Q Consensus 236 ~~~~~gg~~da~~~~~~g~p~v~~--g~g~-~~~~H~~nE~i-------~~~~l~~ 281 (283)
...+.||+ |+.++.. .+|++.+ |.++ ....|++ |+. +.++|..
T Consensus 308 ~~~~~g~~-D~~~~~~-~~P~~~~~~g~~~~~~~~H~~-ef~~~~~~~~~~~~l~~ 360 (394)
T 3ram_A 308 DDFGYGST-DTGNVSH-VVPTIHPHIKIGSRNLVGHTH-RFREAAASVHGDEALIK 360 (394)
T ss_dssp SCCCCBCC-THHHHTT-TSCBCCCEEECSCTTCCTTSH-HHHHHTTSHHHHHHHHH
T ss_pred CCCCcccc-cHHHHHH-HhchheEEeeecCCCCCCCCH-HHHhccCCCccHHHHHH
Confidence 33456774 8888775 5898644 3332 2468999 884 7777654
No 23
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=99.97 E-value=2.1e-30 Score=237.15 Aligned_cols=230 Identities=16% Similarity=0.167 Sum_probs=175.4
Q ss_pred CCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEEecCCC-CCceeccCCc-----------------eeEE
Q 023343 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD-KQPCIGTGGM-----------------IPWK 71 (283)
Q Consensus 10 ~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~~e~~~-~~i~~~~~G~-----------------~~~~ 71 (283)
.++++|.|+|+++||.|+ .|++++++++ +++|++++.|+.. +.+.++++|. .+++
T Consensus 133 ~~~~~v~~~~~~~EE~g~---~Ga~~~~~~~----~~~d~~~~~d~~~~~~i~~g~~g~~~~~~~~~~~~~~~~~g~~~~ 205 (487)
T 2qyv_A 133 IAHPELEVLLTMTEERGM---EGAIGLRPNW----LRSEILINTDTEENGEIYIGCAGGENADLELPIEYQVNNFEHCYQ 205 (487)
T ss_dssp SCCSSEEEEEESCTTTTC---HHHHTCCSSC----CCCSEEEECCCCCTTEEEEEECEEEEEEEEEECCEEECCCSEEEE
T ss_pred CCCCCEEEEEEeccccCC---HHHHHHHHhc----cCCCEEEEEccCCCCeEEEeccCCcceeeeccccccccCCCeEEE
Confidence 477999999999999987 7999988654 2478899888765 3455555544 7799
Q ss_pred EEEee-cCCCcCCC-CCC-CCHHHHHHHHHHHHHhhhcCCCCCCCccccccccCCCcccceEEecCCCccceecCccEEE
Q 023343 72 LHVTG-KLFHSGLP-HKA-INPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVS 148 (283)
Q Consensus 72 i~v~G-~~~Hss~p-~~g-~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~nviP~~~~~~ 148 (283)
|+++| +++|||.| +.| .||+..|++++..|+.+. . ..+++++.|+ +|.+.|+||++|++.
T Consensus 206 i~v~G~~~~Hsg~~~~~g~~nAi~~~~~~i~~l~~~~-~---------------~~~~~v~~i~-gG~~~NvIP~~a~~~ 268 (487)
T 2qyv_A 206 VVLKGLRGGHSGVDIHTGRANAIKVLLRFLAELQQNQ-P---------------HFDFTLANIR-GGSIRNAIPRESVAT 268 (487)
T ss_dssp EEEECCCCCBTTTTTTSCCCCHHHHHHHHHHHHHHHC-T---------------TCCEEEEEEE-EESCTTBCCCCEEEE
T ss_pred EEEEccCCccCCcccccCCCCHHHHHHHHHHHHhhcc-C---------------CCcEEEEEEe-CCCcCcccCCceEEE
Confidence 99999 89999987 776 799999999999998752 1 2467899999 889999999999999
Q ss_pred EEE----------------------------------------EeCCCCCHHHHHHHHHHHHHH----------------
Q 023343 149 GDV----------------------------------------RLTPFYNVTDVMKRLQEYVDD---------------- 172 (283)
Q Consensus 149 ~~~----------------------------------------R~~p~~~~~~~~~~i~~~l~~---------------- 172 (283)
+++ |++|+++.+.+.+.+++.+..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~i~~~i~~~~~gv~~~~~~~~~~~~~s~ 348 (487)
T 2qyv_A 269 LVFNGDITVLQSAVQKFADVIKAELALTEPNLIFTLEKVEKPQQVFSSQCTKNIIHCLNVLPNGVVRNSDVIENVVETSL 348 (487)
T ss_dssp EEECSCHHHHHHHHHHHHHHHHHHTTTTCTTCEEEEEECCCCSEEECHHHHHHHHHHHHHSCCEEEEECSSSTTCEEEEE
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeccccccccCHHHHHHHHHHHHhCCCcceeeccccCCceEecc
Confidence 999 777755555544444433210
Q ss_pred -------------------------------hhhhhhhcccCCCCcccccCCCCcceeEEEEEcCCCCccccCCCCHHHH
Q 023343 173 -------------------------------INENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFH 221 (283)
Q Consensus 173 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~ 221 (283)
..+..+ ..+++++ ++...+|+|.+++|+++++
T Consensus 349 nl~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~---------------~~~g~~~--~~~~~~p~~~~~~d~~l~~ 411 (487)
T 2qyv_A 349 SIGVLKTEDNFVRSTMLVRSLIESGKSYVASLLKSLA---------------SLAQGNI--NLSGDYPGWEPQSHSDILD 411 (487)
T ss_dssp EEEEEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHH---------------HHHTCEE--EEEEEECCBCCCSCCHHHH
T ss_pred ceEEEEEcCCeEEEEEEccCCCHHHHHHHHHHHHHHH---------------HHcCceE--EECCCCCCCCCCCCCHHHH
Confidence 000111 1123444 4445689998888999999
Q ss_pred HHHHHHHHHhCCCC-ceeecCCchhhHhhhhC--CCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 222 VLCKATEEVVGHVN-PYSITGTLPLIRELQDE--GFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 222 ~l~~~~~~~~g~~~-~~~~~gg~~da~~~~~~--g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
.+.+++++++|.++ +..+.||+ |+++|.+. |+|++.|||+. ..+|+|||++++++|.++
T Consensus 412 ~~~~~~~~~~G~~~~~~~~~gg~-D~~~~~~~~pg~~~v~~Gp~~-~~~H~~~E~v~~~~l~~~ 473 (487)
T 2qyv_A 412 LTKTIYAQVLGTDPEIKVIHAGL-ECGLLKKIYPTIDMVSIGPTI-RNAHSPDEKVHIPAVETY 473 (487)
T ss_dssp HHHHHHHHHHSSCCEEEEESSCC-THHHHHHHCTTSEEEECCCCE-ESTTSTTCEEEHHHHHHH
T ss_pred HHHHHHHHHhCCCCeEEEEeccc-cHHHHHhhCCCCCEEEECCCC-CCCCCCCceeEHHHHHHH
Confidence 99999999989654 45567885 88888874 89999999974 579999999999999864
No 24
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=99.97 E-value=2.5e-30 Score=236.44 Aligned_cols=243 Identities=20% Similarity=0.168 Sum_probs=173.8
Q ss_pred CCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEEecCCC-CCc------------------eeccCCcee
Q 023343 9 LKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD-KQP------------------CIGTGGMIP 69 (283)
Q Consensus 9 ~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~~e~~~-~~i------------------~~~~~G~~~ 69 (283)
..++++|.|+|++|||.|+ .|++.+++.. +++|+++..|+.. +.+ ..+++|..+
T Consensus 135 ~~~~~~v~~~~~~~EE~g~---~Ga~~~~~~~----~~~~~~~~~d~~~~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~ 207 (490)
T 3mru_A 135 EIKHGPIEVLLTIDEEAGM---TGAFGLEAGW----LKGDILLNTDSEQEGEVYMGCAGGIDGAMTFDITRDAIPAGFIT 207 (490)
T ss_dssp SCCCCSEEEEEESCSSSTT---GGGGTCCSSS----CCSSEEEECCCCCTTCCEEEECEEEEEEEEEECCEECCCTTEEE
T ss_pred CCCCCCEEEEEEccccccc---HhHHHhhhcc----cCCCEEEEcCCCCCCeEEEecCCccceEEEeeeeeeccCCCceE
Confidence 3568999999999999987 7999887643 3567888877542 121 135689999
Q ss_pred EEEEEee-cCCCcCC-CCCCC-CHHHHHHHHHHHHHhhhcCCCCCCCccccccccCCCcccceEEecCCCccceecCccE
Q 023343 70 WKLHVTG-KLFHSGL-PHKAI-NPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECT 146 (283)
Q Consensus 70 ~~i~v~G-~~~Hss~-p~~g~-nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~nviP~~~~ 146 (283)
++|+++| +++|||. |+.|. ||+..|++++..|++. .+++++.|+ ||.+.|+||++|+
T Consensus 208 ~~i~v~G~~~gHs~~~p~~g~~nai~~~~~~l~~l~~~-------------------~~~~v~~i~-gG~~~NvIP~~a~ 267 (490)
T 3mru_A 208 RQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGHAQE-------------------LDLRLVEFR-GGSLRNAIPREAF 267 (490)
T ss_dssp EEEEEECCCCEETTTSSSSCCCCHHHHHHHHHHHHTTT-------------------TTCEEEEEE-ECSCTTEECCCEE
T ss_pred EEEEEECCCCcccccccccCCcCHHHHHHHHHHHHHhc-------------------CcEEEEEEE-CCCCCcccCCccE
Confidence 9999999 8999995 89999 9999999999988651 256888999 9999999999999
Q ss_pred EEEEEEeCCCCCHHHHHHHHHHHHHHhhhhhh-hc------------------------------------ccCCCC---
Q 023343 147 VSGDVRLTPFYNVTDVMKRLQEYVDDINENIE-KL------------------------------------DTRGPV--- 186 (283)
Q Consensus 147 ~~~~~R~~p~~~~~~~~~~i~~~l~~~~~~~~-~~------------------------------------~~~~~~--- 186 (283)
+.+++|.......++..+.+.+.++....... .+ ....+.
T Consensus 268 ~~~~iR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~l~~~~~G~~~~~~~~~g~v~ 347 (490)
T 3mru_A 268 VTVALPAENQDKLAELFNYYTELLKTELGKIETDIVTFNEEVATDAQVFAIADQQRFIAALNACPNGVMRMSDEVEGVVE 347 (490)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEEECCCCCCEECHHHHHHHHHHHHHSCCEEEEECTTTTSCEE
T ss_pred EEEEECcccHHHHHHHHHHHHHHHHHHhhccCCCeEEEEEecCCccccCCHHHHHHHHHHHHHCCCccceeccccCCCee
Confidence 99999977532223333333333222111000 00 000000
Q ss_pred -c-----------------ccccCC---------------CCcceeEEEEEcCCCCccccCCCCHHHHHHHHHHHHHhCC
Q 023343 187 -S-----------------KYVLPD---------------ENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGH 233 (283)
Q Consensus 187 -~-----------------~~~~~~---------------~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~~~~~~~g~ 233 (283)
+ -..+|. ..++. +++....+|+|..++|+++++.+.+++++++|.
T Consensus 348 ~S~n~gv~~~~~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~~~g~--~~~~~~~~p~~~~~~d~~lv~~l~~a~~~~~G~ 425 (490)
T 3mru_A 348 TSLNVGVITTEENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAGA--QIEFSGAYPGWKPDADSEIMAIFRDMYEGIYGH 425 (490)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEESSHHHHHHHHHHHHHHHHHTTC--EEEEEEEECCBCCCTTCHHHHHHHHHHHTTSSS
T ss_pred EEEEEEEEEEeCCEEEEEEEcCCCCchHHHHHHHHHHHHHHHcCC--eEEecCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Confidence 0 000000 01233 344446789999999999999999999999886
Q ss_pred C-CceeecCCchhhHhhhhC--CCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 234 V-NPYSITGTLPLIRELQDE--GFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 234 ~-~~~~~~gg~~da~~~~~~--g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
+ ....+.||+ |+++|.+. ++|++.|||+. ..+|+|||+++++++.++
T Consensus 426 ~~~~~~~ggg~-d~~~~~~~~p~~~~v~fGp~~-~~~H~p~E~v~i~~l~~~ 475 (490)
T 3mru_A 426 KPNIMVIHAGL-ECGLFKEPYPNMDMVSFGPTI-KFPHSPDEKVKIDTVQLF 475 (490)
T ss_dssp CCCCEEESSCC-HHHHTTSSCTTCEEEECCCCE-ESTTSTTCEEEHHHHHHH
T ss_pred CCeEEEEEecH-HHHHHHHhCCCCCEEEECCCC-CCCCCCCccccHHHHHHH
Confidence 5 566778885 89988885 78899999984 569999999999999765
No 25
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.97 E-value=1.2e-30 Score=234.39 Aligned_cols=234 Identities=12% Similarity=0.084 Sum_probs=179.4
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEEecCC-CCCceeccCCceeEEEEEeecCCC
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA-DKQPCIGTGGMIPWKLHVTGKLFH 80 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~~e~~-~~~i~~~~~G~~~~~i~v~G~~~H 80 (283)
+.|++.+ .++++|+|+|+++||.| .|++++++++ +++|++++.++. .+.+.++.+|..+++|+++|+++|
T Consensus 153 ~~l~~~~-~~~~~v~~~~~~~EE~g----~Ga~~~~~~~----~~~d~~i~~d~~~~g~i~~~~~g~~~~~i~~~G~~~H 223 (417)
T 1fno_A 153 AVLKGNP-IPHGDIKVAFTPDEEVG----KGAKHFDVEA----FGAQWAYTVDGGGVGELEFENFNAASVNIKIVGNNVH 223 (417)
T ss_dssp HHHHSSS-CCCCCEEEEEESCGGGT----CTTTTCCHHH----HCCSEEEECCCCSTTBEECCBCEEEEEEEEEECBCCC
T ss_pred HHHHhCC-CCCCcEEEEEEeccccC----CChhhhchhh----cCCCEEEEeCCCCcCeeEEecCCceeEEEEEEeeccC
Confidence 5677777 78899999999999987 3887776443 357888887764 356788999999999999999999
Q ss_pred cC-CCCCCCCHHHHHHHHHHHHHhhhcCCCCCCCccccccccCCCcccceEEecCCCccceecCccEEEEEEEeCCCCCH
Q 023343 81 SG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNV 159 (283)
Q Consensus 81 ss-~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~nviP~~~~~~~~~R~~p~~~~ 159 (283)
+| .|+.|.||+..|++++..|+.+..+..+ .....+++++.|+ +| |++|++.+|+|++|+++.
T Consensus 224 s~~~p~~g~nAi~~~a~~i~~l~~~~~~~~~---------~~~~~~~~v~~i~-gG------p~~a~~~~d~R~~~~~~~ 287 (417)
T 1fno_A 224 PGTAKGVMVNALSLAARIHAEVPADEAPETT---------EGYEGFYHLASMK-GT------VDRAEMHYIIRDFDRKQF 287 (417)
T ss_dssp GGGCTTTCBCHHHHHHHHHHTSCTTSSGGGC---------CTTCCEEEEEEEE-EC------SSEEEEEEEEEESSHHHH
T ss_pred CCCCccccCCHHHHHHHHHHhhhccCCcccc---------cccccEEEEEEEe-ec------cCeEEEEEEEeCCCHHHH
Confidence 99 6999999999999999988764211100 0113467888888 55 999999999999998888
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccCCCCcccccCCCCcce--eEEEEEcCCCCcc--ccCCCCHHHHHHHHHHHHHhCCCC
Q 023343 160 TDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRG--SLTLTFDEATNGV--ACNLDSRGFHVLCKATEEVVGHVN 235 (283)
Q Consensus 160 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~--~~~~d~~~~~~l~~~~~~~~g~~~ 235 (283)
+++.+.|++.++...+. ++. ++++++...++++ .+++|+++++.+.+++++ .|.++
T Consensus 288 ~~~~~~i~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~~ 347 (417)
T 1fno_A 288 EARKRKMMEIAKKVGKG-------------------LHPDCYIELVIEDSYYNMREKVVEHPHILDIAQQAMRD-CHITP 347 (417)
T ss_dssp HHHHHHHHHHHHHHTTT-------------------CCTTCCEEEEEEEEECCCHHHHHTSTHHHHHHHHHHHH-TTCCC
T ss_pred HHHHHHHHHHHHHHHHH-------------------cCCCceEEEEEeccccchhccccCCCHHHHHHHHHHHH-cCCCc
Confidence 88888887777665322 121 2455554445543 456789999999999999 67543
Q ss_pred -ceeecCCchhhHhhhhCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 236 -PYSITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 236 -~~~~~gg~~da~~~~~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
...+.|| +|+++|...|+|++.|||+.. .+|++||++++++|.++
T Consensus 348 ~~~~~~gg-tD~~~~~~~gip~v~~G~~~~-~~H~~~E~i~~~~l~~~ 393 (417)
T 1fno_A 348 EMKPIRGG-TDGAQLSFMGLPCPNLFTGGY-NYHGKHEFVTLEGMEKA 393 (417)
T ss_dssp BCCCBSSC-CHHHHHTTTTCCCCEECCSEE-STTSTTCEEEHHHHHHH
T ss_pred eeccceec-cchHhHHhcCCCEEEEcCCCC-CCCCcccccCHHHHHHH
Confidence 3445677 489998888999999999854 68999999999998764
No 26
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=99.97 E-value=9.4e-31 Score=239.48 Aligned_cols=245 Identities=13% Similarity=0.088 Sum_probs=147.3
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHcccc---------------------------------------
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLL--------------------------------------- 42 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~--------------------------------------- 42 (283)
+.|++.+.+++++|.|+|+++||+|+ .|+++++++...
T Consensus 151 ~~l~~~~~~~~~~i~~~~~~~EE~g~---~g~~~~~~~~~~~~~~~~~d~~~p~~~g~~G~~~~~l~~~~~~~~~~~~~~ 227 (492)
T 3khx_A 151 KILEDMNVDWKKRIHMIIGTDEESDW---KCTDRYFKTEEMPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDY 227 (492)
T ss_dssp HHHHHTTCCCSSEEEEEEECCTTCCC---CTTSHHHHHSCCCSEEECSSCSSCSCCCBCEEEEEEEEECCCCCCCCCCSE
T ss_pred HHHHHcCCCCCCCEEEEEECCccCCC---cCHHHHHHhCcCCCEEEecCCCccEEEecCcEEEEEEEEeccccccccccc
Confidence 56788888899999999999999998 799999986421
Q ss_pred ----------ccCCCCce--EEecCCCC-Cc---------eeccCCce-----eEEEEEeecCCCcCCCCCCCCHHHHHH
Q 023343 43 ----------NKLKGGPL--YWIDTADK-QP---------CIGTGGMI-----PWKLHVTGKLFHSGLPHKAINPLELAM 95 (283)
Q Consensus 43 ----------~~~~~d~~--~~~e~~~~-~i---------~~~~~G~~-----~~~i~v~G~~~Hss~p~~g~nai~~~~ 95 (283)
.+..+|.+ ++.+|+.. .+ ..+.+|.+ +++|+++|+++|+|.|+.|+||+..++
T Consensus 228 ~~~~~~~g~~~n~vpd~~~aiv~ept~~~~~~~~~~~~~~~~g~kG~~~~~~~~~~i~v~GkaaHas~P~~G~NAi~~~a 307 (492)
T 3khx_A 228 ELITFKSGERYNMVPDHAEARVLVKENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLL 307 (492)
T ss_dssp EEEEEEECSCTTSCCCEEEEEEEECSCHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEECBCCCC------BCHHHHHH
T ss_pred eeEEecccccCCcCCchHheEeecccchHHHHHHHHHHHhhcCceeEEEecCCeEEEEEEeEEcccCCCccCccHHHHHH
Confidence 01123444 45555432 11 24568888 999999999999999999999999999
Q ss_pred HHHHHHH------hhh---cCCCC--CCCccc----cccccCCCcccceEEecCCCccceecCccEEEEEEEeCCCCCHH
Q 023343 96 EALKVIQ------TRF---YKDFP--PHPKEQ----VYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVT 160 (283)
Q Consensus 96 ~~l~~l~------~~~---~~~~~--~~~~~~----~~~~~~~~~~~~~~i~~~g~~~nviP~~~~~~~~~R~~p~~~~~ 160 (283)
+++.+|. .+. .+.+. ...... .....+..++|++.|+ ++. |++|++.+|+|++|+.+.+
T Consensus 308 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~d~~~G~~t~n~g~i~-~g~-----P~~a~~~idiR~~~~~~~~ 381 (492)
T 3khx_A 308 KFLASLNLDNNAQAFVAFSNRYLFNSDFGEKMGMKFHTDVMGDVTTNIGVIT-YDN-----ENAGLFGINLRYPEGFEFE 381 (492)
T ss_dssp HHHTTSCBCHHHHHHHHHHHHHTTTCTTSGGGTCC-------CCEEEEEEEE-EET-----TTCCEEEEEEEECTTCCHH
T ss_pred HHHHhcCCCchHHHHHHHHHHhhCCCCCccccCCccccCCcCccEEeeeEEE-Eec-----CCEEEEEEEeeCCCCCCHH
Confidence 9998875 110 00000 000000 0011234677888887 443 9999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhhcccCCCCcccccCCCCcceeEEEEEcCCCCccccCCCCHHHHHHHHHHHHHhCCC-Cceee
Q 023343 161 DVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHV-NPYSI 239 (283)
Q Consensus 161 ~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~~~~~~~g~~-~~~~~ 239 (283)
++.+.+++.++.. ++++++. ..+|++.+++|+++++.+++++++++|.+ .+..+
T Consensus 382 ~v~~~i~~~~~~~-----------------------g~~~~i~--~~~~p~~~~~d~~lv~~l~~a~~~~~G~~~~~~~~ 436 (492)
T 3khx_A 382 KAMDRFANEIQQY-----------------------GFEVKLG--KVQPPHYVDKNDPFVQKLVTAYRNQTNDMTEPYTI 436 (492)
T ss_dssp HHHHHHHHHHGGG-----------------------TEEEEEE--EEECCBCCGGGCHHHHHHHHHHHTTCC--------
T ss_pred HHHHHHHHHHHHc-----------------------CCEEEEe--ccCCceecCCCcHHHHHHHHHHHHHhCCCCeEEee
Confidence 8888888776521 3455544 45677777789999999999999987854 45556
Q ss_pred cCCchhhHhhhhCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 240 TGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 240 ~gg~~da~~~~~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
.|| +|+++|.+ ++|+..++||....+|++|||+++++|.++
T Consensus 437 ggg-tDa~~~~~-~v~~G~~fPg~~~~~H~~dE~v~i~~l~~~ 477 (492)
T 3khx_A 437 GGG-TYARNLDK-GVAFGAMFSDSEDLMHQKNEYITKKQLFNA 477 (492)
T ss_dssp -----------------------------CCSCEEEHHHHHHH
T ss_pred ehh-HHHHHhhC-ceEECCcCCCCCCCCCCCccCcCHHHHHHH
Confidence 677 59999876 566544448877789999999999999865
No 27
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.95 E-value=5.4e-27 Score=213.74 Aligned_cols=240 Identities=16% Similarity=0.117 Sum_probs=169.1
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHcccccc--CCCCc---eEEecC-----------CC--C-----
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNK--LKGGP---LYWIDT-----------AD--K----- 58 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~--~~~d~---~~~~e~-----------~~--~----- 58 (283)
+.|++.+.+++++|.|+|+++||+|+ .|++++++++...+ +.+|. ++..++ .. +
T Consensus 132 ~~l~~~~~~~~~~i~~i~~~~EE~g~---~G~~~~~~~~~~~~~~~~~D~~~~~~~ge~g~~~~~l~~~~~~~~g~~~~~ 208 (470)
T 1lfw_A 132 LLLKEAGFKPKKKIDFVLGTNEETNW---VGIDYYLKHEPTPDIVFSPDAEYPIINGEQGIFTLEFSFKNDDTKGDYVLD 208 (470)
T ss_dssp HHHHHHTCCCSSEEEEEEESCTTTTC---HHHHHHHHHSCCCSEEEESSEESSEEEEECEEEEEEEEECCCCCCCSBEEE
T ss_pred HHHHHcCCCCCCCEEEEEecCcccCC---ccHHHHHHhCcCCcEEEEeCCCceEEEeccceEEEEEEEccCCcCCCccee
Confidence 56777888899999999999999987 79999998753211 11232 222221 10 1
Q ss_pred --------Cce-------e-------------------ccCCce-----eEEEEEeecCCCcCCCCCCCCHHHHHHHHHH
Q 023343 59 --------QPC-------I-------------------GTGGMI-----PWKLHVTGKLFHSGLPHKAINPLELAMEALK 99 (283)
Q Consensus 59 --------~i~-------~-------------------~~~G~~-----~~~i~v~G~~~Hss~p~~g~nai~~~~~~l~ 99 (283)
.++ + +.+|.+ +++|+++|+++|+|.|+.|.||+..+++++.
T Consensus 209 ~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~ 288 (470)
T 1lfw_A 209 KFKAGIATNVTPQVTRATISGPDLEAVKLAYESFLADKELDGSFEINDESADIVLIGQGAHASAPQVGKNSATFLALFLD 288 (470)
T ss_dssp EEEECSBTTBCCSEEEEEEECSCHHHHHHHHHHHHHHHTCEEEEEEETTEEEEEEECBCCBTTCGGGSBCHHHHHHHHHT
T ss_pred eeecCCcCCcccccceEEecccchHHHHHHHHHHhhhhccccceeecCCcEEEEEeecccCCCCCccCccHHHHHHHHHH
Confidence 011 0 235655 7999999999999999999999999999998
Q ss_pred HHH------hhh---cCCCCCCCccc------cccccCCCcccceEEecCCCccceecCc-cEEEEEEEeCCCCCHHHHH
Q 023343 100 VIQ------TRF---YKDFPPHPKEQ------VYGFETPSTMKPTQWSYPGGGINQIPGE-CTVSGDVRLTPFYNVTDVM 163 (283)
Q Consensus 100 ~l~------~~~---~~~~~~~~~~~------~~~~~~~~~~~~~~i~~~g~~~nviP~~-~~~~~~~R~~p~~~~~~~~ 163 (283)
.|+ .+. .+.+....... ........+++++.|+ .+|++ |++.+++|++|+++.+++.
T Consensus 289 ~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t~~~g~i~-------~~p~~~a~~~~diR~~~~~~~~~i~ 361 (470)
T 1lfw_A 289 QYAFAGRDKNFLHFLAEVEHEDFYGKKLGIFHHDDLMGDLASSPSMFD-------YEHAGKASLLNNVRYPQGTDPDTMI 361 (470)
T ss_dssp TSCBCHHHHHHHHHHHHTTTTCTTSTTTTCCCEETTTEECEEEEEEEE-------EETTSCEEEEEEEEECTTCCHHHHH
T ss_pred hCCCcchhHHHHHHHHHhcCCCCcccccCCcccccccccceEEEEEEE-------EcCCceEEEEEEEecCCCCCHHHHH
Confidence 774 211 11111000000 0000112355555554 57999 9999999999999998888
Q ss_pred HHHHHHHHHhhhhhhhcccCCCCcccccCCCCcceeEEEEEcCCCCccccCCCCHHHHHHHHHHHHHhCCCC-ceeecCC
Q 023343 164 KRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN-PYSITGT 242 (283)
Q Consensus 164 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~~~~~~~g~~~-~~~~~gg 242 (283)
+.+++.++. ++ ++++...+|++.+++|+++++.+.+++++++|.++ +..+.|+
T Consensus 362 ~~i~~~~~~------------------------g~--~v~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~g~ 415 (470)
T 1lfw_A 362 KQVLDKFSG------------------------IL--DVTYNGFEEPHYVPGSDPMVQTLLKVYEKQTGKPGHEVVIGGG 415 (470)
T ss_dssp HHHHHHHTT------------------------TE--EEECSCCBCCEECCTTCHHHHHHHHHHHHHHCCCCCEEEESSC
T ss_pred HHHHHHhcC------------------------Ce--EEEEEeCCCceeeCCCCHHHHHHHHHHHHHcCCCCceeeecCH
Confidence 888877642 13 45666678999888999999999999999988653 4455667
Q ss_pred chhhHhhhhCCCcEEEEcCC---CCccCCCCCcccchhhhhhh
Q 023343 243 LPLIRELQDEGFDVQTAGYG---LMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 243 ~~da~~~~~~g~p~v~~g~g---~~~~~H~~nE~i~~~~l~~~ 282 (283)
+|++++. |++.|||+ ....+|++||++++++|.++
T Consensus 416 -~d~~~~~----~~v~~G~~~pg~~~~~H~~~E~i~~~~l~~~ 453 (470)
T 1lfw_A 416 -TYGRLFE----RGVAFGAQPENGPMVMHAANEFMMLDDLILS 453 (470)
T ss_dssp -CGGGGST----TCEECCEECTTCCCCTTSTTCEEEHHHHHHH
T ss_pred -hHHHhCC----CeEEECCCCCCCCCCCCCCCcceEHHHHHHH
Confidence 5898875 57888964 34679999999999999764
No 28
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.41 E-value=3.4e-13 Score=93.80 Aligned_cols=64 Identities=8% Similarity=-0.032 Sum_probs=54.1
Q ss_pred CHHHHHHHHHHHHHhCCCC-ceeecCCchhhHhhhhCCCcEEEEcCCCC--ccCCCCCcccchhhhhhh
Q 023343 217 SRGFHVLCKATEEVVGHVN-PYSITGTLPLIRELQDEGFDVQTAGYGLM--ATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 217 ~~~~~~l~~~~~~~~g~~~-~~~~~gg~~da~~~~~~g~p~v~~g~g~~--~~~H~~nE~i~~~~l~~~ 282 (283)
+|++++++++++++ |.++ +..+.|+ +|+++|...|+|++.||||.. ..+|++||+|++++|.++
T Consensus 1 ~~~v~~l~~a~~~~-g~~~~~~~~~g~-TDar~~~~~gip~v~fGPg~~~~~~~H~~dE~v~i~~l~~~ 67 (88)
T 1q7l_B 1 NPWWAAFSRVCKDM-NLTLEPEIMPAA-GDNRYIRAVGVPALGFSPMNRTPVLLHDHDERLHEAVFLRG 67 (88)
T ss_dssp CHHHHHHHHHHHHT-TCCEEEEECCSC-SHHHHHHHTTCCEEEECCCCSCCCCTTSTTCEEEHHHHHHH
T ss_pred ChHHHHHHHHHHHc-CCeeEeeeecee-CcHHHHHHcCCCEEEECCCCCCcccccCCCCeeEHHHHHHH
Confidence 47999999999998 7554 4445555 699999999999999999963 579999999999999875
No 29
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.41 E-value=7.7e-13 Score=111.44 Aligned_cols=64 Identities=25% Similarity=0.167 Sum_probs=51.7
Q ss_pred CHHHHHHHHHHHHHhCCCCcee-ecCCchhhHhhhhCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 217 SRGFHVLCKATEEVVGHVNPYS-ITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 217 ~~~~~~l~~~~~~~~g~~~~~~-~~gg~~da~~~~~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
+++++.+.+++++..|.++... +.|| +|+.++.+.|+|++.|||+. ..+|+++|+++++|+.++
T Consensus 191 ~~l~~~l~~a~~~~~gi~~~~~~sggg-tD~~~~~~~g~p~~~~~~~~-~~~Hs~~E~v~~~d~~~~ 255 (268)
T 3t68_A 191 GELLAAVVAAVEEVNHQAPALLTTGGT-SDGRFIAQMGAQVVELGPVN-ATIHKVNECVRIADLEKL 255 (268)
T ss_dssp CHHHHHHHHHHHHHHSSCCEEESSCCC-HHHHHHHHHTCEEEECCSBC-TTTTSTTCEEEHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCcEEecCccc-cHHHHHHhcCCCEEEEeeCC-CCCCCccccccHHHHHHH
Confidence 5789999999988767554443 4455 69999998999999999985 456999999999999864
No 30
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.37 E-value=2.2e-12 Score=108.65 Aligned_cols=65 Identities=22% Similarity=0.136 Sum_probs=50.2
Q ss_pred CHHHHHHHHHHHHHhCCCCceeecCCchhhHhhhhCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 217 SRGFHVLCKATEEVVGHVNPYSITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 217 ~~~~~~l~~~~~~~~g~~~~~~~~gg~~da~~~~~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
+++++.+.+++++..|-++.....||++|++++...|+|++.||++. ..+|+++|+++++|+.++
T Consensus 191 ~~l~~~l~~aa~~~~gi~~~~~~~gggtDa~~~~~~g~p~~~~~~~~-~~~Hs~~E~v~~~d~~~~ 255 (269)
T 4h2k_A 191 GKLLDSITSAIEETIGITPKAETGGGTSDGRFIALMGAEVVEFGPLN-STIHKVNECVSVEDLGKC 255 (269)
T ss_dssp -HHHHHHHHHHHHHHSCCCEEECC--CHHHHHHHTTTCEEEECCSBC-TTTTSTTCEEEHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCCEEecCCCCchHHHHHhhCCCEEEEEeCC-CCCcCCcccccHHHHHHH
Confidence 46888888888886675544333334469999998999999999985 567999999999999865
No 31
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=98.98 E-value=1.5e-10 Score=100.70 Aligned_cols=61 Identities=18% Similarity=0.091 Sum_probs=45.0
Q ss_pred CCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEEecCCCCCceeccCCceeEEEEEeecCCCcCCCCCCCC
Q 023343 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHSGLPHKAIN 89 (283)
Q Consensus 10 ~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~~e~~~~~i~~~~~G~~~~~i~v~G~~~Hss~p~~g~n 89 (283)
+++++|.|+|+++||.|+ .|++++++. +.+|++++.|++... ++.|++.|++.|+.|.|
T Consensus 184 ~~~~~i~~~~~~~EE~G~---~G~~~~~~~-----~~~~~~i~~d~~~~~-------------~~~G~~~h~~~~~~G~g 242 (340)
T 2fvg_A 184 SPAYDTYFVFTVQEETGL---RGSAVVVEQ-----LKPTCAIVVETTTAG-------------DNPELEERKWATHLGDG 242 (340)
T ss_dssp CCSEEEEEEEECCCC--------CHHHHHH-----HCCSEEEEEEEEEEC-------------SCSTTCCSSSSCCTTSC
T ss_pred ccCCcEEEEEEcccccch---hhhHHHhhc-----cCCCEEEEEecccCC-------------CCCCCccccCCcccCCC
Confidence 578999999999999998 799998863 356889999875432 46788899888988888
Q ss_pred HH
Q 023343 90 PL 91 (283)
Q Consensus 90 ai 91 (283)
++
T Consensus 243 ~~ 244 (340)
T 2fvg_A 243 PA 244 (340)
T ss_dssp CE
T ss_pred cE
Confidence 53
No 32
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=98.88 E-value=4.7e-09 Score=90.90 Aligned_cols=64 Identities=14% Similarity=0.034 Sum_probs=51.2
Q ss_pred CCCHHHHHHHHHHHHHhCCCCc-eeecCCchhhHhhhhCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 215 LDSRGFHVLCKATEEVVGHVNP-YSITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 215 ~d~~~~~~l~~~~~~~~g~~~~-~~~~gg~~da~~~~~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
.+.++++.+.+++++. |.+.. ....|| +|+.+|.. |+|++.+||+ ...+|+++|+++++++.++
T Consensus 257 ~~~~l~~~l~~~~~~~-gi~~~~~~~~gg-tDa~~~~~-GiPtv~lg~~-~~~~Hs~~E~v~~~dl~~~ 321 (332)
T 2wyr_A 257 YSRDLARKVWSIAEKN-GIEIQIGVTGGG-TDASAFQD-RSKTLALSVP-IKYLHSEVETLHLNDLEKL 321 (332)
T ss_dssp CCHHHHHHHHHHHHHT-TCCCEEEECSSC-CGGGGGTT-TSEEEEEECE-EBSCSSTTCEEEHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCeEEecCCCC-chHHHHHc-CCCEEEEcCC-cCCCCChhhcccHHHHHHH
Confidence 5678899999888875 65433 334566 58999988 9999999998 4579999999999999865
No 33
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=98.80 E-value=1.7e-11 Score=105.74 Aligned_cols=218 Identities=9% Similarity=-0.049 Sum_probs=101.5
Q ss_pred CCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEEecCCCCCceeccCCceeEEEEEeecCCCcCCCCCCCC
Q 023343 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHSGLPHKAIN 89 (283)
Q Consensus 10 ~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~~e~~~~~i~~~~~G~~~~~i~v~G~~~Hss~p~~g~n 89 (283)
.+...+.+++..+||.+. .|.+.+......... ......+.....+..+.++.....+.+.+...|++.+..
T Consensus 114 ~~~~~~~~~~~~~ee~~~---~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 185 (354)
T 2wzn_A 114 ERYGVVGVLPPHLRRGQE---DKGSKIDWDQIVVDV--GASSKEEAEEMGFRVGTVGEFAPNFTRLNEHRFATPYLD--- 185 (354)
T ss_dssp EEEEEECCCCGGGC------------CCGGGCCEEC--SCSSHHHHHHTTCCTTCEEEECCCCEECSSSEEECTTHH---
T ss_pred CccceEEEeeeeeEeccc---ccccchhhhhhhhhh--cccchhhhhccccccceeeeeeeeeEeeccccccccccc---
Confidence 355677888889999876 566555433221111 111111111223344566666677777888888876654
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCccccccccCCCcccceEEecCCCccceecCccEEEEEEEeCCCCCHHHHHHHHHHH
Q 023343 90 PLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEY 169 (283)
Q Consensus 90 ai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~nviP~~~~~~~~~R~~p~~~~~~~~~~i~~~ 169 (283)
+...+..++..+.++...... ..+....+...+... ++...|.++..+....+.+........
T Consensus 186 ~~~~~~~~~~~~~~l~~~~~~-------~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 248 (354)
T 2wzn_A 186 DRICLYAMIEAARQLGDHEAD-------IYIVGSVQEEVGLRG-ARVASYAINPEVGIAMDVTFAKQPHDK--------- 248 (354)
T ss_dssp HHHHHHHHHHHHHHCCCCSSE-------EEEEEESCGGGTSHH-HHHHHHHHCCSEEEEEEEEECCCTTST---------
T ss_pred ccchhhhHHHHHHHHHhcccc-------ccccccceeeeeeec-ccccccccccccceeeeeeeccccchh---------
Confidence 444444444444443211100 000000111222222 334466777777777777766432110
Q ss_pred HHHhhhhhhhcccCCCCcccccCCCCcceeEEEEEcCCCCccccCCCCHHHHHHHHHHHHHhCC--CC-ceeecCCchhh
Q 023343 170 VDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGH--VN-PYSITGTLPLI 246 (283)
Q Consensus 170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~~~~~l~~~~~~~~g~--~~-~~~~~gg~~da 246 (283)
..... ............ ...+-............+. .+ .....|| +|+
T Consensus 249 -~~~~~-------------------~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg-TDa 299 (354)
T 2wzn_A 249 -GKIVP-------------------ELGKGPVMDVGP--------NINPKLRAFADEVAKKYEIPLQVEPSPRPTG-TDA 299 (354)
T ss_dssp -TCCCC-------------------CTTSCCEEEEST--------TSCHHHHHHHHHHHHHTTCCCEEEECCSCCS-SHH
T ss_pred -hhhhe-------------------eecccccccccc--------ccCcchhhhhHHHHHHhcCCCceEEEecccc-cHH
Confidence 00000 000111111111 1122122222222222222 22 2234556 599
Q ss_pred Hhhh--hCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 247 RELQ--DEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 247 ~~~~--~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
+++. ..|+|++.|||| ...+|++||+|+++|+.++
T Consensus 300 ~~~~~~~~Giptv~~G~g-~~~~Ht~~E~v~i~dl~~~ 336 (354)
T 2wzn_A 300 NVMQINKEGVATAVLSIP-IRYMHSQVELADARDVDNT 336 (354)
T ss_dssp HHHHTSTTCCEEEEEEEE-EBSTTSTTCEEEHHHHHHH
T ss_pred HHHHHhcCCCCEEEECcc-cCCCCcccEEEEHHHHHHH
Confidence 9875 369999999998 4568999999999999875
No 34
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=98.63 E-value=3.9e-08 Score=85.86 Aligned_cols=65 Identities=11% Similarity=0.017 Sum_probs=50.4
Q ss_pred CCCHHHHHHHHHHHHHhCCCCce--eecCCchhhHhh--hhCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 215 LDSRGFHVLCKATEEVVGHVNPY--SITGTLPLIREL--QDEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 215 ~d~~~~~~l~~~~~~~~g~~~~~--~~~gg~~da~~~--~~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
.+.++++.+++++++. |.+... ...|| +|+.+| ...|+|++.+||+. ..+|+++|+++++++.++
T Consensus 269 ~~~~l~~~l~~~a~~~-gi~~~~~~~~~gg-sDa~~~~~~~~GiPtv~lg~~~-~~~Hs~~E~v~~~dl~~~ 337 (353)
T 1y0y_A 269 CHPTIVRWLEELAKKH-EIPYQLEILLGGG-TDAGAIHLTKAGVPTGALSVPA-RYIHSNTEVVDERDVDAT 337 (353)
T ss_dssp CCHHHHHHHHHHHHHT-TCCEEEEECSSCC-CTHHHHTTSTTCCCEEEEEEEE-BSCSSSCEEEEHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCEEEeecCCCC-chHHHHHHhCCCCcEEEEcccc-cccCCHHHhcCHHHHHHH
Confidence 5677888888888876 544333 24566 589988 45799999999974 569999999999998765
No 35
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=98.38 E-value=3.6e-08 Score=78.93 Aligned_cols=69 Identities=16% Similarity=0.206 Sum_probs=55.0
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCceE---EecCCCC-CceeccCCceeEEE
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLY---WIDTADK-QPCIGTGGMIPWKL 72 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~---~~e~~~~-~i~~~~~G~~~~~i 72 (283)
+.|++.+.+++++|.|+|+++||.|+. .|++++++++.++..++|+++ +.||+.. .+++++||..+++|
T Consensus 126 ~~l~~~~~~~~~~v~~~~~~~EE~g~~--~Ga~~~~~~~~~~~~~~~~~id~g~~ept~~~~v~~~~kG~~~~~v 198 (198)
T 1q7l_A 126 RRLKVEGHRFPRTIHMTFVPDEEVGGH--QGMELFVQRPEFHALRAGFALDEGIANPTDAFTVFYSERSPWWVRV 198 (198)
T ss_dssp HHHHHTTCCCSSCEEEEEESCGGGTST--TTHHHHTTSHHHHTTCEEEEEECCCCCSSSSEEEEECCSSCGGGCC
T ss_pred HHHHHcCCCCCCCEEEEEEcccccCcc--ccHHHHHHhHHhccCCcCEEEecCccCCCCCceEEEEccEEEEEEC
Confidence 567777778899999999999999742 699999987644445677888 7888874 67899999988754
No 36
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=97.92 E-value=9.3e-06 Score=70.59 Aligned_cols=63 Identities=14% Similarity=-0.113 Sum_probs=36.7
Q ss_pred CCHHHHHHHHHHHHHhCCCC-c-eeecCCchhhHhhh--hCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 216 DSRGFHVLCKATEEVVGHVN-P-YSITGTLPLIRELQ--DEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 216 d~~~~~~l~~~~~~~~g~~~-~-~~~~gg~~da~~~~--~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
+..+++.+++++++. |-+. . ....|| +|+.++. ..|+|++.+|++. ..+|+ .|+++++++..+
T Consensus 268 ~~~l~~~l~~~a~~~-gi~~q~~~~~ggG-sDa~~~~~~~~GiPt~~lg~~~-~~~Hs-~E~~~~~dl~~~ 334 (349)
T 2gre_A 268 HYALRKHLVELAKTN-HIEYKVDIYPYYG-SDASAAIRAGFDVKHALIGAGI-DSSHA-FERTHESSIAHT 334 (349)
T ss_dssp CHHHHHHHHHHHHHH-TCCEEEEECSCC---------CCSSSCEEEEEEECC-BSTTS-SEEEEHHHHHHH
T ss_pred CHHHHHHHHHHHHHc-CCCcEEeccCCCC-ccHHHHHHhCCCCcEEEeccCc-ccccc-ceeccHHHHHHH
Confidence 334566666666554 3332 1 124566 4887774 4699999888763 46999 999999998764
No 37
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=97.83 E-value=1.2e-05 Score=70.49 Aligned_cols=66 Identities=11% Similarity=0.030 Sum_probs=51.7
Q ss_pred CCCCHHHHHHHHHHHHHhCCCCce--eecCCchhhHhh--hhCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 214 NLDSRGFHVLCKATEEVVGHVNPY--SITGTLPLIREL--QDEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 214 ~~d~~~~~~l~~~~~~~~g~~~~~--~~~gg~~da~~~--~~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
..+.++++.+++++++. |.+... ...|| +|+.+| ...|+|++.|||+. ..+|+++|+++++++.++
T Consensus 272 ~~~~~l~~~l~~~a~~~-gi~~~~~~~~~gg-tDa~~~~~~~~GiPtv~lg~~~-~~~Hs~~E~v~~~dl~~~ 341 (373)
T 1vhe_A 272 VSHKGLRDAVVATAEEA-GIPYQFDAIAGGG-TDSGAIHLTANGVPALSITIAT-RYIHTHAAMLHRDDYENA 341 (373)
T ss_dssp ECCHHHHHHHHHHHHHH-TCCCEEEEETTCC-CTHHHHTTSTTCCCEEEEEEEE-BSTTSSCEEEEHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHc-CCCeEEecCCCCC-ccHHHHHHhCCCCcEEEEcccc-ccCCChhheecHHHHHHH
Confidence 36778999999999886 544332 34556 589988 45799999999974 568999999999998865
No 38
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=97.81 E-value=2.5e-05 Score=67.74 Aligned_cols=65 Identities=12% Similarity=-0.027 Sum_probs=50.9
Q ss_pred CCCHHHHHHHHHHHHHhCCCCce-e-ecCCchhhHhhhh--CCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 215 LDSRGFHVLCKATEEVVGHVNPY-S-ITGTLPLIRELQD--EGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 215 ~d~~~~~~l~~~~~~~~g~~~~~-~-~~gg~~da~~~~~--~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
.+..+++.+++++++. |-+... . +.|| +|+.++.. .|+|++.+||+. ..+|+++|+++++++..+
T Consensus 257 ~~~~l~~~~~~~a~~~-gi~~~~~~~~~gg-sDa~~~~~~~~gipt~~lg~~~-~~~Hs~~E~~~~~d~~~~ 325 (348)
T 1ylo_A 257 APPKLTAWIETVAAEI-GVPLQADMFSNGG-TDGGAVHLTGTGVPTLVMGPAT-RHGHCAASIADCRDILQM 325 (348)
T ss_dssp CCHHHHHHHHHHHHHH-TCCCEEEECSSCC-CHHHHHHTSTTCCCEEEEECCC-BSCSSSCEEEEHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCeEEeecCCCc-chHHHHHHhcCCCCEEEECccc-CcCCCcceEeeHHHHHHH
Confidence 5678899999999886 544333 3 5667 58998854 599999999984 469999999999998765
No 39
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=97.67 E-value=1.5e-05 Score=68.48 Aligned_cols=65 Identities=17% Similarity=0.045 Sum_probs=50.9
Q ss_pred CCCHHHHHHHHHHHHHhCCCCce-e-ecCCchhhHhh--hhCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 215 LDSRGFHVLCKATEEVVGHVNPY-S-ITGTLPLIREL--QDEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 215 ~d~~~~~~l~~~~~~~~g~~~~~-~-~~gg~~da~~~--~~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
.+.++++.+++++++. |-+... . ..|| +|+.++ ...|+|++.+||+ ...+|+++|+++++|+..+
T Consensus 242 ~~~~l~~~~~~~a~~~-gi~~q~~~~~~GG-sD~~~~~~s~~Gipt~~lG~~-~~~~Hs~~E~~~~~dl~~~ 310 (321)
T 3cpx_A 242 PRKKYVNRIIELARQT-DIPFQLEVEGAGA-SDGRELQLSPYPWDWCFIGAP-EKDAHTPNECVHKKDIESM 310 (321)
T ss_dssp CCHHHHHHHHHHHTTS-SCCEEEEECSSCC-CHHHHHHHSSSCCBCCBEECE-EBSTTSTTCEEEHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCEEEEeCCCCC-ccHHHHHHhCCCCCEEEEchh-hcccchhhhheeHHHHHHH
Confidence 6778899999888875 544333 2 5666 589988 4479999999998 4579999999999998764
No 40
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=97.66 E-value=2.3e-05 Score=68.01 Aligned_cols=66 Identities=11% Similarity=0.013 Sum_probs=48.7
Q ss_pred CCCCHHHHHHHHHHHHHhCCCCcee-e-c-CCchhhHhhh--hCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 214 NLDSRGFHVLCKATEEVVGHVNPYS-I-T-GTLPLIRELQ--DEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 214 ~~d~~~~~~l~~~~~~~~g~~~~~~-~-~-gg~~da~~~~--~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
..+.++++.+++++++. |-+.... . . || +|+.++. ..|+|++.+|++. ..+|+++|+++++|+.++
T Consensus 253 ~~~~~l~~~~~~~a~~~-gi~~~~~~~~g~gg-sDa~~~~~~~~gipt~~lg~~~-~~~Hs~~E~~~~~dl~~~ 323 (346)
T 1vho_A 253 VVDRNLVQKIIEIAKKH-NVSLQEEAVGGRSG-TETDFVQLVRNGVRTSLISIPL-KYMHTPVEMVDPRDVEEL 323 (346)
T ss_dssp TSCHHHHHHHHHHHHHT-TCCCEEESSCCC-----CTTHHHHHTTCEEEEEEEEC-BSTTSTTEEECHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHC-CCCEEEEeCCCCCC-chHHHHHHhCCCCcEEEEehhh-cccccHHHhcCHHHHHHH
Confidence 46778999999999884 5544333 3 3 66 5899885 4799999999874 469999999999999865
No 41
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=96.33 E-value=0.003 Score=54.76 Aligned_cols=65 Identities=18% Similarity=0.103 Sum_probs=48.5
Q ss_pred CCCHHHHHHHHHHHHHhCCCCc-eeecCCchhhHhhhh--CCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 215 LDSRGFHVLCKATEEVVGHVNP-YSITGTLPLIRELQD--EGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 215 ~d~~~~~~l~~~~~~~~g~~~~-~~~~gg~~da~~~~~--~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
.+..+++.+.+++++. |-+.. ....||| |+..+.. .|+|++.+|+. ...+|++.|+++++|+..+
T Consensus 266 ~~~~l~~~l~~~a~~~-gIp~q~~~~ggGt-Da~~i~~a~~Gipt~~igvp-~~~~Hs~~E~~~~~Di~~~ 333 (355)
T 3kl9_A 266 LLPGMKDFLLTTAEEA-GIKYQYYCGKGGT-DAGAAHLKNGGVPSTTIGVC-ARYIHSHQTLYAMDDFLEA 333 (355)
T ss_dssp CCHHHHHHHHHHHHHT-TCCEEEEECSSCC-THHHHTTSTTCCCEEEEEEE-EBSCSSSCEEEEHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCEEEECCCcch-HHHHHHHhCCCCCEEEEccC-cCCCCCcceEeeHHHHHHH
Confidence 4667889999988875 54432 3345775 8877764 69999998875 3359999999999998764
No 42
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=96.22 E-value=0.004 Score=53.93 Aligned_cols=65 Identities=11% Similarity=-0.012 Sum_probs=47.9
Q ss_pred CCCHHHHHHHHHHHHHhCCCCce-e-ec-CCchhhHhhhh--CCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 215 LDSRGFHVLCKATEEVVGHVNPY-S-IT-GTLPLIRELQD--EGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 215 ~d~~~~~~l~~~~~~~~g~~~~~-~-~~-gg~~da~~~~~--~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
.|..+++.+.+++++. |-+... . .. ||| |+..+.. .|+|++.+|++. ..+|++.|+++++|+..+
T Consensus 267 ~~~~l~~~l~~~a~~~-gIp~q~~~~~g~gGt-Da~~i~~a~~Gipt~~Igvp~-~~~Hs~~E~~~~~D~~~~ 336 (354)
T 2vpu_A 267 INPKLRAFADEVAKKY-EIPLQVEPSPRPTGT-DANVMQINKEGVATAVLSIPI-RYMHSQVELADARDVDNT 336 (354)
T ss_dssp SCHHHHHHHHHHHHHT-TCCCEEEECCSCCSS-THHHHHTSTTCCEEEEEEEEE-BSTTSTTCEEEHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCcEEEeCCCCCcc-HHHHHHHhcCCCCEEEECccc-ccCcCcceEeeHHHHHHH
Confidence 4567888998888875 544333 3 33 675 7877653 699999998763 359999999999998764
No 43
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=95.84 E-value=0.0027 Score=53.72 Aligned_cols=52 Identities=19% Similarity=0.143 Sum_probs=39.1
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEEecCC
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA 56 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~~e~~ 56 (283)
+.|++.+.+++++|.|+|.++||.|. .|+++++++...+..+.++++..|..
T Consensus 130 ~~l~~~~~~~~~~i~~~~~~~EE~g~---~Gs~~~~~~~~~~~~~~~~~i~~D~~ 181 (299)
T 1rtq_A 130 RVLSENNFQPKRSIAFMAYAAEEVGL---RGSQDLANQYKSEGKNVVSALQLDMT 181 (299)
T ss_dssp HHHHHTTCCCSEEEEEEEESCGGGTS---HHHHHHHHHHHHTTCEEEEEEECSCC
T ss_pred HHHHHcCCCCCceEEEEEECCccCCc---hhHHHHHHhhhhccccEEEEEEecCC
Confidence 56777777899999999999999998 79999988754322233466766654
No 44
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=95.41 E-value=0.0058 Score=51.20 Aligned_cols=52 Identities=12% Similarity=0.042 Sum_probs=39.1
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccc-cCCCCceEEecCC
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLN-KLKGGPLYWIDTA 56 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~-~~~~d~~~~~e~~ 56 (283)
+.|++.+.+++++|+|+|+++||.|. .|+++++++.... .-+.+++++.|..
T Consensus 110 ~~l~~~~~~~~~~i~~~~~~~EE~g~---~Gs~~~~~~~~~~~~~~~~~~i~~D~~ 162 (284)
T 1tkj_A 110 LAVSRAGYQPDKHLRFAWWGAEELGL---IGSKFYVNNLPSADRSKLAGYLNFDMI 162 (284)
T ss_dssp HHHHHTTCCCSEEEEEEEESCGGGTS---HHHHHHHHHSCHHHHTTEEEEEEECCC
T ss_pred HHHHhcCCCCCceEEEEEECCcccCC---cCHHHHHhhCccchhhcEEEEEEecCC
Confidence 56777777899999999999999987 7999999875321 1133467777754
No 45
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=95.20 E-value=0.011 Score=50.91 Aligned_cols=64 Identities=19% Similarity=0.116 Sum_probs=46.6
Q ss_pred CCHHHHHHHHHHHHHhCCCCce-e-ecCCchhhHhhhh--CCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 216 DSRGFHVLCKATEEVVGHVNPY-S-ITGTLPLIRELQD--EGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 216 d~~~~~~l~~~~~~~~g~~~~~-~-~~gg~~da~~~~~--~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
|..+++.+.+++++. |-+... . ..||| |+..+.. .|+|++.+|++. -.+|++.|+++++|+..+
T Consensus 266 d~~l~~~l~~~A~~~-gIp~Q~~v~~ggGT-Da~~i~~a~~Gipt~~Igvp~-r~~Hs~~E~~~~~Di~~~ 333 (343)
T 3isx_A 266 SKRILENLIEIAEKF-DIKYQMEVLTFGGT-NAMGYQRTREGIPSATVSIPT-RYVHSPSEMIAPDDVEAT 333 (343)
T ss_dssp HHHHHHHHHHHHHHT-TCCCEECCCBCCCS-SHHHHHHHTSSCCEEEEEEEE-BSTTSTTEEECHHHHHHH
T ss_pred CHHHHHHHHHHHHHC-CCCeEEecCCCCch-HHHHHHHhcCCCCEEEEcccc-ccccchhhEecHHHHHHH
Confidence 456888888888875 544333 2 35775 7766543 699999998753 359999999999998765
No 46
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=93.69 E-value=0.022 Score=49.61 Aligned_cols=45 Identities=18% Similarity=0.155 Sum_probs=34.3
Q ss_pred ccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEEecCCC
Q 023343 3 KLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (283)
Q Consensus 3 ~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~~e~~~ 57 (283)
.|++. .++++|.|+|+++||.|+ .|++++... +++|++++.|++.
T Consensus 198 ~l~~~--~~~~~v~~~~~~~EE~G~---~G~~~~~~~-----~~~d~~i~~d~~~ 242 (373)
T 1vhe_A 198 NLQNT--DHPNIVYGVGTVQEEVGL---RGAKTAAHT-----IQPDIAFGVDVGI 242 (373)
T ss_dssp HHHTS--CCSSEEEEEEESCCTTTS---HHHHHHHHH-----HCCSEEEEEEEEE
T ss_pred HHhhc--CCCceEEEEEECCcccCh---hhHHHHhcc-----cCCCEEEEEeccc
Confidence 44443 367899999999999998 799988542 3468899888754
No 47
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=93.64 E-value=0.065 Score=47.92 Aligned_cols=65 Identities=12% Similarity=0.046 Sum_probs=48.1
Q ss_pred CCCHHHHHHHHHHHHHhCCCCce-e------ecCCchhhHhhhhCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 215 LDSRGFHVLCKATEEVVGHVNPY-S------ITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 215 ~d~~~~~~l~~~~~~~~g~~~~~-~------~~gg~~da~~~~~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
.|..+...+++++++. |-+... . ..|| +++..+...|+|++.+|+. .-.+|++.|.++++|+..+
T Consensus 377 ~~~~~~~~l~~~a~~~-~Ip~Q~~~~~r~d~~~Gg-T~~~~~a~~Gi~tvdiGiP-~~~mHS~~E~~~~~Di~~~ 448 (458)
T 1y7e_A 377 ADAELVSYIRQLLNKN-NIAWQVATLGKVEEGGGG-TVAKFLAGYGIRTIDMGPA-VISMHSPMEITSKFDLYNA 448 (458)
T ss_dssp -CHHHHHHHHHHHHHH-TCCEEEEEECC-----CH-HHHHHHHHHTCEEEEECCE-EBSTTSSSEEEEHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCeEEEEeeccCCCCcC-cHHHHHhCCCCCEEEEchh-hcccchHHHHhhHHHHHHH
Confidence 4667888998888886 544322 2 2355 4788777789999999986 4578999999999998754
No 48
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=93.22 E-value=0.046 Score=48.80 Aligned_cols=37 Identities=22% Similarity=0.233 Sum_probs=32.6
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHccc
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGL 41 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~ 41 (283)
+.|++.+.+++++|+|+|..+||.|. .|+++++++..
T Consensus 282 ~~l~~~~~~~~~~i~f~~~~~EE~gl---~Gs~~~~~~~~ 318 (444)
T 3iib_A 282 KHILDLPQKPERTIRVVLYAAEELGL---LGGKTYAKEHE 318 (444)
T ss_dssp HHHHTSSSCCSEEEEEEEESCGGGTS---HHHHHHHHHTG
T ss_pred HHHHhcCCCCCCeEEEEEECCcccCC---cCHHHHHHhhH
Confidence 56777777899999999999999998 89999998764
No 49
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=90.28 E-value=0.31 Score=43.43 Aligned_cols=66 Identities=18% Similarity=0.117 Sum_probs=47.2
Q ss_pred CCCHHHHHHHHHHHHHhCCCCce--e----ecCCchhhHhhhhCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 215 LDSRGFHVLCKATEEVVGHVNPY--S----ITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 215 ~d~~~~~~l~~~~~~~~g~~~~~--~----~~gg~~da~~~~~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
.+..+...+++++++. |-+... . ..||++.+.+..+.|+|++.+|.- .-.+|++.|-++..|+..+
T Consensus 368 ~~~~~~~~~~~ia~~~-~Ip~Q~~~~gr~d~~gGstig~i~a~~Gi~tvdiGiP-~l~MHS~~E~~~~~D~~~~ 439 (450)
T 2glf_A 368 AHAEFVARVRKVLNEQ-GVIWQVATLGKVDQGGGGTIAKFFAERGSDVIDMGPA-LLGMHSPFEISSKADLFET 439 (450)
T ss_dssp CCHHHHHHHHHHHHHT-TCCEEECCSSSTTSCCCCCTHHHHHTTTSCEEEEECE-EBSTTSSSEEEEHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCEEEEEeccCCCCCCCcHHHHHhCCCCcEEEechh-hcccchHHHHhhHHHHHHH
Confidence 4566777888888775 544222 1 335555777776679999999874 3468999999999998754
No 50
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=90.10 E-value=0.18 Score=42.61 Aligned_cols=51 Identities=14% Similarity=0.203 Sum_probs=33.0
Q ss_pred cccccccCCCceeEEEEEEeccccCCCC----------CcCHHHHHHccccccCCCCceEEec
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAIT----------GVGVDALVKDGLLNKLKGGPLYWID 54 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~----------~~G~~~l~~~~~~~~~~~d~~~~~e 54 (283)
+.|++.+ ++++|.|+|..+||.|..+ ..|+++++++......++.+++..|
T Consensus 140 r~l~~~~--~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlD 200 (309)
T 3tc8_A 140 RQIGQKA--PGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPHVPNYTAEYGILLD 200 (309)
T ss_dssp HHHHHSC--CSSEEEEEEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCSSTTCCCSEEEEEE
T ss_pred HHHHhCC--CCCcEEEEEECccccccccccccccccccchhHHHHHhCCCccccceEEEEEec
Confidence 4455553 8899999999999997510 0589999886533222333444444
No 51
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=89.83 E-value=0.18 Score=44.67 Aligned_cols=66 Identities=9% Similarity=-0.044 Sum_probs=45.6
Q ss_pred CCCHHHHHHHHHHHHHhCCCCce-e----ecCCchhhHhhh-hCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 215 LDSRGFHVLCKATEEVVGHVNPY-S----ITGTLPLIRELQ-DEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 215 ~d~~~~~~l~~~~~~~~g~~~~~-~----~~gg~~da~~~~-~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
.|..++..+++++++. |-+... . ..||++-+.+.. ..|+|++.+|+. .-.+|++.|.++++|+..+
T Consensus 343 ~~~~~~~~l~~~a~~~-~Ip~Q~~~~~~d~~gGsd~g~i~~~~~Gi~tvdiGip-~~~mHS~~E~~~~~D~~~~ 414 (428)
T 2ijz_A 343 TNSETAGFFRHLCQDS-EVPVQSFVTRSDMGCGSTIGPITASQVGVRTVDIGLP-TFAMHSIRELAGSHDLAHL 414 (428)
T ss_dssp CCHHHHTTTTHHHHHT-CCCCCBCCCCSSCCCCCCCSTTTGGGGSCCEEEECCC-CCSCSSSSCCCCSSHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCeEEEEEeCCCCccchHHHHHHhCCCCCEEEEchh-hcccchHHHHhhHHHHHHH
Confidence 4556777888888775 543222 2 345643344434 479999999986 4578999999999998754
No 52
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=89.61 E-value=0.19 Score=42.59 Aligned_cols=52 Identities=13% Similarity=0.147 Sum_probs=32.8
Q ss_pred cccccccCCCceeEEEEEEeccccCCCC-----------CcCHHHHHHccccccCCCCceEEecC
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAIT-----------GVGVDALVKDGLLNKLKGGPLYWIDT 55 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~-----------~~G~~~l~~~~~~~~~~~d~~~~~e~ 55 (283)
+.|++. .++++|.|+|..+||.|..+ ..|+++++++......++.++|..|-
T Consensus 142 r~l~~~--~~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlDm 204 (314)
T 3gux_A 142 RQIQKE--QPALGIDIVFFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPHVQNYNARYGILLDM 204 (314)
T ss_dssp HHHHHS--CCSSEEEEEEECSCCC-----------CTTSCHHHHHHHHSCSSTTCCCSEEEEEES
T ss_pred HHHHhC--CCCCcEEEEEECCccccccccccccccccccchhHHHHHhCCcccccceeEEEEEec
Confidence 455555 38899999999999997510 05899999865432233445555553
No 53
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=88.71 E-value=0.5 Score=42.46 Aligned_cols=64 Identities=17% Similarity=0.114 Sum_probs=46.4
Q ss_pred CCHHHHHHHHHHHHHhCCCCc-ee-----ecCCchhhHhhh-hCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 216 DSRGFHVLCKATEEVVGHVNP-YS-----ITGTLPLIRELQ-DEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 216 d~~~~~~l~~~~~~~~g~~~~-~~-----~~gg~~da~~~~-~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
|..++..+++++++. |-+.. +. .+|| +++.+.. +.|+|++.+|.- .--+|++.|-++..|+..+
T Consensus 405 ~~~~~~~l~~ia~~~-~Ip~Q~~v~r~D~~gGg-Tig~i~~s~~Gi~tvdIGiP-~ryMHS~~E~~~~~D~~~~ 475 (496)
T 3vat_A 405 NAVSEALIREVASSV-GVPLQDLMVRNDSPCGT-TIGPILASRLGLRVLDLGSP-QLAMHSIRETACTTGVLQT 475 (496)
T ss_dssp CHHHHHHHHHHHHHH-TCCCEEECCCTTSCCCC-CHHHHHHHHHTCEEEEEECE-EESTTSSSEEEESHHHHHH
T ss_pred CHHHHHHHHHHHHHc-CCCEEEEEecCCCCCcc-hHHHHHhcccCCcEEEecHh-hhccccHHHHhhHHHHHHH
Confidence 566788888888775 54433 22 2345 5787765 369999999874 3468999999999998764
No 54
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=87.13 E-value=0.3 Score=43.60 Aligned_cols=65 Identities=18% Similarity=0.096 Sum_probs=48.0
Q ss_pred CCCHHHHHHHHHHHHHhCCCCce-e------ecCCchhhHhhhhCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 215 LDSRGFHVLCKATEEVVGHVNPY-S------ITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 215 ~d~~~~~~l~~~~~~~~g~~~~~-~------~~gg~~da~~~~~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
.|..+...+++++++. |-+... . ..||| .+..+.+.|+|++.+|+. .-.+|++.|-+..+|+..+
T Consensus 380 ~~~~~~~~l~~ia~~~-~Ip~Q~~~~gr~d~~~GgT-ig~~~a~~Gi~tvdiGiP-~l~MHS~~E~~~~~Di~~~ 451 (461)
T 2glj_A 380 ANPEYIAELRRILSKE-SVNWQTAELGKVDQGGGGT-IAYILAEYGMQVIDCGVA-LLNMHAPWEISSKADIYET 451 (461)
T ss_dssp CCHHHHHHHHHHHHHT-CCCEEECCSSSSSSSCCCC-THHHHHTTTCBCCBBCCE-EESTTSSSEEEEHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCeEEEeeeccCCCCccc-HHHHHhCCCCCEEEEchh-hcccchHHHHhhHHHHHHH
Confidence 5667888888888875 543222 1 23665 677777789999999986 4468999999999998754
No 55
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=85.00 E-value=0.34 Score=41.22 Aligned_cols=29 Identities=24% Similarity=0.239 Sum_probs=23.8
Q ss_pred CCCceeEEEEEEecccc--------CCCCCcCHHHHHHcc
Q 023343 9 LKLKSTVIAVFIASEEN--------SAITGVGVDALVKDG 40 (283)
Q Consensus 9 ~~~~~~i~~~~~~dEE~--------g~~~~~G~~~l~~~~ 40 (283)
.+++++|.|+|..+||. |. .|+++++++.
T Consensus 155 ~~~~~~i~~~~~~~EE~~~~~~~~~gl---~Gs~~~~~~~ 191 (329)
T 2afw_A 155 SKPDLSLQLIFFDGEEAFLHWSPQDSL---YGSRHLAAKM 191 (329)
T ss_dssp --CCEEEEEEEESCCSCSSSCCSSSSC---HHHHHHHHHH
T ss_pred CCCCccEEEEEecCcccccccCCCccc---hhHHHHHHHH
Confidence 47899999999999998 55 7999998764
No 56
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=84.91 E-value=0.98 Score=41.20 Aligned_cols=65 Identities=9% Similarity=0.029 Sum_probs=45.7
Q ss_pred CCHHHHHHHHHHHHHh-----CCCCc-ee-----ecCCchhhHhhh-hCCCcEEEEcCCCCccCCCCCcccchhhhhhh
Q 023343 216 DSRGFHVLCKATEEVV-----GHVNP-YS-----ITGTLPLIRELQ-DEGFDVQTAGYGLMATYHADNEYCLLSDIRLT 282 (283)
Q Consensus 216 d~~~~~~l~~~~~~~~-----g~~~~-~~-----~~gg~~da~~~~-~~g~p~v~~g~g~~~~~H~~nE~i~~~~l~~~ 282 (283)
+..++..+++++++.. |-+.. +. .+|| +++.++. +.|+|++.+|.- .--+|++.|-+...|+..+
T Consensus 473 n~~~~~~l~~iA~~~~~~~~~gIP~Q~~v~rnD~~gGg-Tig~i~~s~~GIpTvdIGiP-~ryMHS~~E~~~~~Dv~~~ 549 (571)
T 4eme_A 473 SPLHASLIKRTFELYYNKYKQQIKYQNFMVKNDTPCGS-TVGSMVAANLSMPGIDIGIP-QLAMHSIREIAAVHDVFFL 549 (571)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCCCCEEEECCCSSSCCCC-CSHHHHHHHHTCCEEEEECE-EESTTSSSEEEEHHHHHHH
T ss_pred CHHHHHHHHHHHHhcccccCCCCCEEEEEEcCCCCCcc-hHHHHHHhCCCCcEEEechh-hhccchHHHHhhHHHHHHH
Confidence 5678888888888762 33322 22 2455 4677665 479999999874 3468999999999998754
No 57
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=80.77 E-value=0.76 Score=39.57 Aligned_cols=38 Identities=16% Similarity=0.095 Sum_probs=29.1
Q ss_pred CCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEEecC
Q 023343 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDT 55 (283)
Q Consensus 10 ~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~~e~ 55 (283)
+++.+++++|+..||+|+ .|+...... +.+|.+|..|.
T Consensus 201 ~~~~~v~~~ft~qEEvG~---~Ga~~a~~~-----~~pd~~i~~D~ 238 (355)
T 3kl9_A 201 KLGNELYLGSNVQEEVGL---RGAHTSTTK-----FDPEVFLAVDC 238 (355)
T ss_dssp CCSSEEEEEEESCCTTTS---HHHHHHHHH-----HCCSEEEEEEE
T ss_pred CCCceEEEEEECccccCc---chhHHHHhc-----cCCCEEEEecC
Confidence 578999999999999998 677665543 24677887664
No 58
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=79.64 E-value=1.1 Score=38.24 Aligned_cols=39 Identities=26% Similarity=0.164 Sum_probs=29.9
Q ss_pred CceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEEecCCC
Q 023343 11 LKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (283)
Q Consensus 11 ~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~~e~~~ 57 (283)
++.++.++|+.+||.|+ .|+...... +.+|+++..|.+.
T Consensus 189 ~~~~~~~~~t~~EEvG~---~Ga~~~~~~-----i~~~~~i~~D~~~ 227 (348)
T 1ylo_A 189 LPAEVWLVASSSEEVGL---RGGQTATRA-----VSPDVAIVLDTAC 227 (348)
T ss_dssp CSSEEEEEEESCCTTSS---HHHHHHHHH-----HCCSEEEEECCCC
T ss_pred CCceEEEEEEcccccch---hHHHHhhcc-----cCCCEEEEEeccc
Confidence 66899999999999998 688766532 3467888887654
No 59
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=78.23 E-value=0.91 Score=42.32 Aligned_cols=32 Identities=13% Similarity=0.177 Sum_probs=28.3
Q ss_pred ccCCCceeEEEEEEeccccCCCCCcCHHHHHHccc
Q 023343 7 TKLKLKSTVIAVFIASEENSAITGVGVDALVKDGL 41 (283)
Q Consensus 7 ~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~ 41 (283)
.+.+|+++|+|++..+||.|. .|+.+++++..
T Consensus 320 ~g~~p~r~I~f~~~~~EE~gl---~GS~~~~~~~~ 351 (640)
T 3kas_A 320 DGFQPSRSIIFASWSAGDFGS---VGATEWLEGYL 351 (640)
T ss_dssp SCCCCSEEEEEEEESSGGGTS---HHHHHHHHHTT
T ss_pred cCCCCCCcEEEEEECCcccCc---hhHHHHHHhhh
Confidence 367899999999999999998 89999998753
No 60
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=78.09 E-value=0.89 Score=40.05 Aligned_cols=50 Identities=16% Similarity=0.211 Sum_probs=34.1
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccc-cCCCCceEEecCC
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLN-KLKGGPLYWIDTA 56 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~-~~~~d~~~~~e~~ 56 (283)
+.|++ .+++++|+|+|..+||.|. .|+++++++.... .-+..++|..|..
T Consensus 253 ~~l~~--~~~~~~i~~~~~~~EE~g~---~Gs~~~~~~~~~~~~~~~~~~in~D~~ 303 (421)
T 2ek8_A 253 RVMSK--LKTDTELRFITFGAEENGL---IGSKKYAASLSEDEIKRTIGMFQLDMV 303 (421)
T ss_dssp HHHTT--SCCSSEEEEEEESSSTTTS---HHHHHHHTTCCHHHHHHEEEEEEECSC
T ss_pred HHHhc--cCCCceEEEEEECCccccc---hhHHHHHHhCccchhhcEEEEEEeccc
Confidence 34554 3578999999999999998 8999999875321 1122355666643
No 61
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=78.02 E-value=1.6 Score=36.62 Aligned_cols=51 Identities=10% Similarity=0.150 Sum_probs=33.4
Q ss_pred cccccccCCCceeEEEEEEeccccCCCC-----------CcCHHHHHHccccccCCCCceEEec
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAIT-----------GVGVDALVKDGLLNKLKGGPLYWID 54 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~-----------~~G~~~l~~~~~~~~~~~d~~~~~e 54 (283)
|.|++. +++.+|.|+|..+||.|... ..|++++++.......+..+++..|
T Consensus 140 r~l~~~--~~~~~i~~~~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~~~~~~i~~~inlD 201 (309)
T 4fuu_A 140 RLVNQQ--QPELGIDIIFLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPHVQGYNARFGILLD 201 (309)
T ss_dssp HHHHHS--CCSSEEEEEEECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCSSTTCCCSEEEEEC
T ss_pred HHHhhc--CCCCceEEEeecccccCccccccchhhhhhhhcchhHHHhcccccCcceEEEEeee
Confidence 445543 68899999999999987310 0488888876543333444556555
No 62
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=77.35 E-value=1 Score=38.80 Aligned_cols=43 Identities=12% Similarity=-0.048 Sum_probs=30.1
Q ss_pred ccccccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEEec
Q 023343 3 KLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWID 54 (283)
Q Consensus 3 ~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~~e 54 (283)
+|++.+. ++.+++++|+..||+|+ .|+...... +.+|.++..|
T Consensus 196 ~l~~l~~-~~~~v~~~ft~qEEVG~---~ga~~aa~~-----i~pd~~i~~D 238 (354)
T 2vpu_A 196 AARQLGD-HEADIYIVGSVQEEVGL---RGARVASYA-----INPEVGIAMD 238 (354)
T ss_dssp HHHHCCC-CSSEEEEEECSCCTTTS---HHHHHHHHH-----HCCSEEEEEE
T ss_pred HHHHhhc-CCCeEEEEEECCcccCc---cchhhhhcc-----cCCCEEEEec
Confidence 3444432 78899999999999998 677655432 2466777665
No 63
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=74.41 E-value=2.2 Score=35.79 Aligned_cols=34 Identities=15% Similarity=0.149 Sum_probs=26.5
Q ss_pred cCCCceeEEEEEEeccccCCC-----CCcCHHHHHHccc
Q 023343 8 KLKLKSTVIAVFIASEENSAI-----TGVGVDALVKDGL 41 (283)
Q Consensus 8 ~~~~~~~i~~~~~~dEE~g~~-----~~~G~~~l~~~~~ 41 (283)
+.+++++|.|+|..+||.|.. .-.|+++++++..
T Consensus 127 ~~~p~~tI~fv~fdaEE~G~~~~~~~~L~GS~~~a~~~~ 165 (312)
T 4f9u_A 127 RNRSDVGLMLIFFDGEEAFKEWTDADSVYGSKHLAAKLA 165 (312)
T ss_dssp GSCSSEEEEEEEESCCSCSSSCSSSSSCHHHHHHHHHHH
T ss_pred cCCCCceEEEEEecCccccccCCccccccChHHHHHHHH
Confidence 457999999999999998720 0169999998754
No 64
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=73.53 E-value=1.2 Score=37.90 Aligned_cols=38 Identities=18% Similarity=0.184 Sum_probs=28.7
Q ss_pred CceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEEecCC
Q 023343 11 LKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA 56 (283)
Q Consensus 11 ~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~~e~~ 56 (283)
+++++.++|+.+||.|+ .|+.... ..+.+|+++..|..
T Consensus 192 ~~~~~~~~~t~~EEvG~---~Ga~~~~-----~~i~~~~~i~~D~~ 229 (346)
T 1vho_A 192 HPWDVYVVFSVQEETGC---LGALTGA-----YEINPDAAIVMDVT 229 (346)
T ss_dssp CSSEEEEEEECTTSSSH---HHHHHTT-----CCCCCSEEEEEEEE
T ss_pred CCceEEEEEECCcccch---hhHHHHh-----cccCCCEEEEeecc
Confidence 56899999999999987 6777643 23467788887753
No 65
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=71.72 E-value=1.3 Score=37.88 Aligned_cols=36 Identities=25% Similarity=0.218 Sum_probs=26.7
Q ss_pred ceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEEecC
Q 023343 12 KSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDT 55 (283)
Q Consensus 12 ~~~i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~~e~ 55 (283)
+.+++++|+..||+|+ .|+..... .+.+|.+|..|.
T Consensus 198 ~~~~~~~ft~qEEVG~---~Ga~~aa~-----~i~pd~~i~vDv 233 (343)
T 3isx_A 198 AVTLYGVFSVQEEVGL---VGASVAGY-----GVPADEAIAIDV 233 (343)
T ss_dssp SSEEEEEEECCCCTTS---CCSTTTGG-----GCCCSEEEEEEE
T ss_pred CCeEEEEEECCcccCc---hhHHHHhh-----cCCCCEEEEEeC
Confidence 6899999999999998 57654432 235778887663
No 66
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=69.76 E-value=1.8 Score=36.82 Aligned_cols=28 Identities=25% Similarity=0.252 Sum_probs=25.2
Q ss_pred CCCceeEEEEEEecccc--------CCCCCcCHHHHHHc
Q 023343 9 LKLKSTVIAVFIASEEN--------SAITGVGVDALVKD 39 (283)
Q Consensus 9 ~~~~~~i~~~~~~dEE~--------g~~~~~G~~~l~~~ 39 (283)
.+++.+|.|+|..+||. |. .|+++++++
T Consensus 159 ~~~~~~i~fv~~~~EE~f~~w~~~~gl---~GS~~~a~~ 194 (330)
T 3pb6_X 159 QAAPVTLQLLFLDGEEALKEWGPKDSL---YGSRHLAQL 194 (330)
T ss_dssp TTCSEEEEEEEESCCSCSSCCSTTSSC---HHHHHHHHH
T ss_pred CCCCCcEEEEEEcCcccccccCCCCCC---ccHHHHHHH
Confidence 57999999999999998 76 799999875
No 67
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=68.71 E-value=2 Score=40.54 Aligned_cols=31 Identities=16% Similarity=0.208 Sum_probs=27.8
Q ss_pred ccCCCceeEEEEEEeccccCCCCCcCHHHHHHcc
Q 023343 7 TKLKLKSTVIAVFIASEENSAITGVGVDALVKDG 40 (283)
Q Consensus 7 ~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~~~~ 40 (283)
.+.+++++|+|++..+||.|. .|+.+++++.
T Consensus 365 ~g~~p~r~I~f~~~~~EE~Gl---~GS~~~~~~~ 395 (707)
T 3fed_A 365 KGWRPRRTIIFASWDAEEFGL---LGSTEWAEEN 395 (707)
T ss_dssp TTCCCSEEEEEEEESCGGGTS---HHHHHHHHHH
T ss_pred ccCCCCCCEEEEEeCCccccc---hhHHHHHHhc
Confidence 467899999999999999998 8999999865
No 68
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=68.29 E-value=3 Score=35.35 Aligned_cols=33 Identities=24% Similarity=0.146 Sum_probs=25.6
Q ss_pred cCCCceeEEEEEEeccccCCCC-----CcCHHHHHHcc
Q 023343 8 KLKLKSTVIAVFIASEENSAIT-----GVGVDALVKDG 40 (283)
Q Consensus 8 ~~~~~~~i~~~~~~dEE~g~~~-----~~G~~~l~~~~ 40 (283)
+.+++++|.|+|..+||.|... ..|+++++++.
T Consensus 151 ~~~p~rtI~fv~fdgEE~Gl~~~~~~~llGS~~~a~~~ 188 (330)
T 4fai_A 151 LKKSKLSLMLLFFDGEEAFEEWGPKDSIYGARHLAKKW 188 (330)
T ss_dssp GGTSSEEEEEEEESCCSCSSSCBTTBSCHHHHHHHHHH
T ss_pred cCCCCccEEEEEeccccccccccccchhhhhHHHHhcc
Confidence 4578999999999999987310 14899998863
No 69
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=63.25 E-value=3.7 Score=34.56 Aligned_cols=39 Identities=18% Similarity=0.078 Sum_probs=27.3
Q ss_pred EEEEEEeccccCCCCCcCHHHHHHccccccCCCCceEEecCCC
Q 023343 15 VIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (283)
Q Consensus 15 i~~~~~~dEE~g~~~~~G~~~l~~~~~~~~~~~d~~~~~e~~~ 57 (283)
|.++|+.+||+|+ .|+...... ..+.+++|+++..|++.
T Consensus 183 i~~~~t~~EEvG~---~Ga~~a~~~-~~~~~~~~~~i~~D~~~ 221 (321)
T 3cpx_A 183 GIIAFTCWEEHGG---GSVAYLARW-IYETFHVKQSLICDITW 221 (321)
T ss_dssp EEEEEESSTTTTC---CSHHHHHHH-HHHHHCCCEEEECCCEE
T ss_pred cEEEEECCccCch---hcchhhhhc-cccccCCCEEEEEeCcc
Confidence 8999999999998 688753310 01123578899988764
No 70
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=62.30 E-value=18 Score=29.63 Aligned_cols=62 Identities=10% Similarity=-0.045 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHhCCCCce-e-ecCCchhhHhhhhCCCcEEEEcCCC--------------------CccCCCCCcc--
Q 023343 218 RGFHVLCKATEEVVGHVNPY-S-ITGTLPLIRELQDEGFDVQTAGYGL--------------------MATYHADNEY-- 273 (283)
Q Consensus 218 ~~~~~l~~~~~~~~g~~~~~-~-~~gg~~da~~~~~~g~p~v~~g~g~--------------------~~~~H~~nE~-- 273 (283)
.+.+.+.+.+++. |-+... . ..++ +|...|.+.|+|++.+..+. ....|++.+.
T Consensus 177 ~l~~~~~~~~~~~-gi~~~~~~~~~~~-sD~~~f~~~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D~~~ 254 (284)
T 1tkj_A 177 VIEKTFKNYFAGL-NVPTEIETEGDGR-SDHAPFKNVGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLS 254 (284)
T ss_dssp HHHHHHHHHHHHH-TCCCEECCSSTTC-STHHHHHHTTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTT
T ss_pred HHHHHHHHHHHHc-CCCcccCCCCCCC-CchHHHHHCCCCEEEeecCcccccccchhhccccccccCCCCCCCCCcCChh
Confidence 3555666666553 433221 1 1244 46665677899999876541 2357999876
Q ss_pred -cchhhhhh
Q 023343 274 -CLLSDIRL 281 (283)
Q Consensus 274 -i~~~~l~~ 281 (283)
++.+++.+
T Consensus 255 ~id~~~l~~ 263 (284)
T 1tkj_A 255 NINDTALDR 263 (284)
T ss_dssp SCCHHHHHH
T ss_pred hCCHHHHHH
Confidence 77777654
No 71
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=52.70 E-value=38 Score=28.19 Aligned_cols=62 Identities=8% Similarity=0.016 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHhCCCCceee-cCC--chhhHhhhh-CCCcEEEEcCC-------CCccCCCCC---cccchhhhhh
Q 023343 219 GFHVLCKATEEVVGHVNPYSI-TGT--LPLIRELQD-EGFDVQTAGYG-------LMATYHADN---EYCLLSDIRL 281 (283)
Q Consensus 219 ~~~~l~~~~~~~~g~~~~~~~-~gg--~~da~~~~~-~g~p~v~~g~g-------~~~~~H~~n---E~i~~~~l~~ 281 (283)
+++.+.+.++.. |-...|.. .+| .+|...|.+ .|||++.+.+. .....|+++ |+|+.+.|.+
T Consensus 222 l~~~~~~~a~~~-g~~~~f~~~~~g~~~sDh~~f~~~~GiP~~~li~~~~~~~~~~~~~~Ht~~Dt~d~id~~~l~~ 297 (309)
T 3tc8_A 222 IVEMVWSAARDL-GYGKYFINAAGGAITDDHQYVISGRNIPSIDIINYDPESKTGFASYWHTQKDNMENIDRETLKA 297 (309)
T ss_dssp HHHHHHHHHHHH-TCTTTEEEEECCCCCCHHHHHHHHHCCCEEEEEBCCTTSSSSSCTTTTSTTCSGGGBCHHHHHH
T ss_pred HHHHHHHHHHHc-CCcceeccCCCCCCCCccHHHHhcCCCCEEEEecccCcccCCCCCCCCCCcCChhhCCHHHHHH
Confidence 444555555443 53333321 122 368888888 79999987442 135689999 8888887765
No 72
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=43.74 E-value=58 Score=20.42 Aligned_cols=31 Identities=10% Similarity=0.178 Sum_probs=23.9
Q ss_pred CccEEEEEEEeCCCCCHHHHHHHHHHHHHHh
Q 023343 143 GECTVSGDVRLTPFYNVTDVMKRLQEYVDDI 173 (283)
Q Consensus 143 ~~~~~~~~~R~~p~~~~~~~~~~i~~~l~~~ 173 (283)
+--++.+|+|...+...+..++++++.+.++
T Consensus 15 dgqeieidirvstgkeleralqelekalara 45 (96)
T 2jvf_A 15 DGQEIEIDIRVSTGKELERALQELEKALARA 45 (96)
T ss_dssp TTEEEEEEEECCSSSHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEEEcccHHHHHHHHHHHHHHHhc
Confidence 4458899999998877777777777777654
No 73
>3kz5_E Protein SOPB; partition, segregation, F plasmid, DNA-binding protein, DNA- DNA binding protein; 1.58A {Escherichia coli}
Probab=42.29 E-value=22 Score=20.79 Aligned_cols=28 Identities=11% Similarity=0.367 Sum_probs=22.2
Q ss_pred CccEEEEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 023343 143 GECTVSGDVRLTPFYNVTDVMKRLQEYVDDIN 174 (283)
Q Consensus 143 ~~~~~~~~~R~~p~~~~~~~~~~i~~~l~~~~ 174 (283)
+.+++.+|.+-.| .++.+.|+..|++..
T Consensus 21 d~Vsf~Ld~~~iP----~~~IeKIE~lL~e~~ 48 (52)
T 3kz5_E 21 DKMVLNLDRSRVP----TECIEKIEAILKELE 48 (52)
T ss_dssp TEEEEEEETTTSC----HHHHHHHHHHHHHHC
T ss_pred CeEEEEeccccCC----HHHHHHHHHHHHHHh
Confidence 4568888877776 889999999998754
No 74
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=36.93 E-value=56 Score=26.75 Aligned_cols=62 Identities=11% Similarity=0.022 Sum_probs=36.3
Q ss_pred CHHHHHHHHHHHHHh-CCCCcee--ecCCchhhHhhhhCCCcEEEEcCC----CCccCCCCCcccchhhh
Q 023343 217 SRGFHVLCKATEEVV-GHVNPYS--ITGTLPLIRELQDEGFDVQTAGYG----LMATYHADNEYCLLSDI 279 (283)
Q Consensus 217 ~~~~~~l~~~~~~~~-g~~~~~~--~~gg~~da~~~~~~g~p~v~~g~g----~~~~~H~~nE~i~~~~l 279 (283)
..+.+.+.+++++.. +-+..+. ..++ +|...|.+.|+|++.+... .....|++.+.++.-|.
T Consensus 199 ~~l~~~l~~~a~~~~~~i~~~~~~~~~~~-sD~~~f~~~GiP~~~~~~~~~~~~~~~yHt~~Dt~~~~d~ 267 (299)
T 1rtq_A 199 SNFTQYLTQLMDEYLPSLTYGFDTCGYAC-SDHASWHNAGYPAAMPFESKFNDYNPRIHTTQDTLANSDP 267 (299)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEECCSSCC-STHHHHHHTTCCEECEESSCGGGSCTTTTSTTCCGGGSCT
T ss_pred chHHHHHHHHHHHhCccCCcccCCCCCCC-CcHHHHHHCCCCEEEecccccccCCCCCCCccccccccCc
Confidence 346667777776642 1122221 1245 4666677789999855331 12468999988876554
No 75
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=36.56 E-value=15 Score=32.35 Aligned_cols=41 Identities=15% Similarity=0.080 Sum_probs=28.2
Q ss_pred cCCchhhHhhhhCCCcEEEEcCCC---CccCCCC---Ccccchhhhhh
Q 023343 240 TGTLPLIRELQDEGFDVQTAGYGL---MATYHAD---NEYCLLSDIRL 281 (283)
Q Consensus 240 ~gg~~da~~~~~~g~p~v~~g~g~---~~~~H~~---nE~i~~~~l~~ 281 (283)
.++ +|...|.+.|+|++.+.... ....|++ =|+|+.+.|.+
T Consensus 372 ~~~-SD~~~f~~~GiP~~~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~ 418 (444)
T 3iib_A 372 SGG-PDVSMLPALGVPVASLRQDGSDYFDYHHTPNDTLDKINPEALAQ 418 (444)
T ss_dssp CCC-GGGTTSGGGTCCEEEEEECCTTGGGTTTSTTCCGGGSCHHHHHH
T ss_pred CCC-CccHHHHHCCCCEEEeecCCCcCCCCCCCCccccccCCHHHHHH
Confidence 455 57766778899999876532 2367988 56777777654
No 76
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=30.96 E-value=1e+02 Score=26.66 Aligned_cols=56 Identities=16% Similarity=0.128 Sum_probs=32.3
Q ss_pred HHHHHHHhCCCCceeecCCchhhHhhhhCCCcEEEEcCCC-CccCCCCCcc---cchhhhhh
Q 023343 224 CKATEEVVGHVNPYSITGTLPLIRELQDEGFDVQTAGYGL-MATYHADNEY---CLLSDIRL 281 (283)
Q Consensus 224 ~~~~~~~~g~~~~~~~~gg~~da~~~~~~g~p~v~~g~g~-~~~~H~~nE~---i~~~~l~~ 281 (283)
.+.+++. |.+......+++ |...|.+.|||++.|...+ ....|++.+. ++.+++.+
T Consensus 328 ~~~~~~~-~~~~~~~~~~~S-D~~~F~~~GIP~~~~~~~~~~~~yHt~~Dt~~~i~~~~l~~ 387 (421)
T 2ek8_A 328 AAASSRL-SGVLPYGQEGRS-DHESFHALGIPAALFIHAPVEPWYHTPNDTLDKISKEKLDN 387 (421)
T ss_dssp HHHHHHH-TSCCCEEECCSS-THHHHHTTTCCEEEEEEESCCTTTTSTTCCGGGBCHHHHHH
T ss_pred HHHHHhc-CCCCCCCCCCCC-ccHHHHHCCCCEEEEECCcCCCCCCCcccchhhCCHHHHHH
Confidence 3344443 443333344564 5555667899999775221 2357998887 66666543
No 77
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=25.82 E-value=26 Score=30.77 Aligned_cols=31 Identities=10% Similarity=0.005 Sum_probs=22.4
Q ss_pred cccccccCCCceeEEEEEEeccccCCCCCcCHHHHH
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALV 37 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~~~~G~~~l~ 37 (283)
++|++.. ....+|.++| ..||+|+ .|+.-..
T Consensus 245 ~al~~~~-~~~~~v~~~f-d~EEVGs---~ga~gA~ 275 (428)
T 2ijz_A 245 EALLNAE-GDENCILVCT-DHEEVGS---CSHCGAD 275 (428)
T ss_dssp THHHHTT-SCSSSCEEEE-CBSCTTT---TCHHHHS
T ss_pred HHHHhcc-cCCceEEEEE-eccccCc---cchhhhh
Confidence 4555554 5667898888 9999998 5766543
No 78
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=24.45 E-value=26 Score=31.16 Aligned_cols=25 Identities=28% Similarity=0.389 Sum_probs=19.6
Q ss_pred cccccccCCCceeEEEEEEeccccCC
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSA 27 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~ 27 (283)
++|++.. .+..+++++|...||+|+
T Consensus 271 ~al~~~~-~~~~~~~~~~~d~EEVGs 295 (461)
T 2glj_A 271 EAMLEMK-NAKKTCITILVDKEEVGS 295 (461)
T ss_dssp HHHHTCC-SCSSCEEEEEECCGGGTC
T ss_pred HHHHhhc-cCCCeEEEEEEccCCCCC
Confidence 3455544 577899999999999998
No 79
>1oey_A P67-PHOX, neutrophil cytosol factor 2; immune system, PB1 heterodimer/complex, NADPH oxidase, PB1 D heterodimerization; 2.0A {Homo sapiens} SCOP: d.15.2.2
Probab=22.46 E-value=51 Score=21.58 Aligned_cols=28 Identities=7% Similarity=0.023 Sum_probs=24.2
Q ss_pred cEEEEEEEeCCCCCHHHHHHHHHHHHHH
Q 023343 145 CTVSGDVRLTPFYNVTDVMKRLQEYVDD 172 (283)
Q Consensus 145 ~~~~~~~R~~p~~~~~~~~~~i~~~l~~ 172 (283)
++..+-+|.+++.+..++.+.|.+.+.-
T Consensus 12 ~~~tvairvp~~~~y~~L~~~l~~kL~l 39 (83)
T 1oey_A 12 YKYTVVMKTQPGLPYSQVRDMVSKKLEL 39 (83)
T ss_dssp SSSEEEEEECTTCCHHHHHHHHHHHTTC
T ss_pred EEEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 5678899999999999999998888864
No 80
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=21.51 E-value=1.5e+02 Score=18.13 Aligned_cols=26 Identities=19% Similarity=0.250 Sum_probs=19.3
Q ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 023343 148 SGDVRLTPFYNVTDVMKRLQEYVDDIN 174 (283)
Q Consensus 148 ~~~~R~~p~~~~~~~~~~i~~~l~~~~ 174 (283)
.+|+|+- +-+.+.+.+.+++.++++.
T Consensus 2 emdirfr-gddleafekalkemirqar 27 (85)
T 2kl8_A 2 EMDIRFR-GDDLEAFEKALKEMIRQAR 27 (85)
T ss_dssp EEEEEEE-CSSHHHHHHHHHHHHHHHT
T ss_pred ccceeec-CCcHHHHHHHHHHHHHHHH
Confidence 3566665 5568888899999988753
No 81
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=20.44 E-value=31 Score=30.54 Aligned_cols=25 Identities=20% Similarity=0.238 Sum_probs=19.3
Q ss_pred cccccccCCCceeEEEEEEeccccCCC
Q 023343 2 RKLGETKLKLKSTVIAVFIASEENSAI 28 (283)
Q Consensus 2 ~~L~~~~~~~~~~i~~~~~~dEE~g~~ 28 (283)
++|.+. .+..++++++...||+|++
T Consensus 259 ~al~~~--~~~~~~~~~~~d~EEVGs~ 283 (450)
T 2glf_A 259 RALLSA--NPEKSIGVIFFDKEEIGSD 283 (450)
T ss_dssp HHHHHC--CCSSCEEEEEESCGGGTSC
T ss_pred HHHHhc--CCCceEEEEEEcccccCCc
Confidence 345554 4677999999999999984
Done!