Query 023344
Match_columns 283
No_of_seqs 253 out of 1864
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 05:13:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023344.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023344hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dmp_A Uracil phosphoribosyltr 100.0 2E-67 6.8E-72 466.5 22.1 210 71-283 7-217 (217)
2 1bd3_D Uprtase, uracil phospho 100.0 1.5E-65 5E-70 461.4 24.6 217 66-282 26-243 (243)
3 1xtt_A Probable uracil phospho 100.0 2.1E-64 7.3E-69 447.0 23.4 203 74-280 2-216 (216)
4 2ehj_A Uracil phosphoribosyltr 100.0 2.6E-63 9E-68 437.8 22.8 206 73-282 1-208 (208)
5 1v9s_A Uracil phosphoribosyltr 100.0 2.7E-63 9.2E-68 437.7 22.8 205 74-282 2-208 (208)
6 1o5o_A Uracil phosphoribosyltr 100.0 4.5E-62 1.5E-66 433.3 24.6 208 71-282 12-221 (221)
7 2e55_A Uracil phosphoribosyltr 100.0 2.9E-60 9.8E-65 418.4 25.6 204 75-283 2-207 (208)
8 1i5e_A Uracil phosphoribosyltr 100.0 1E-57 3.4E-62 402.9 23.3 207 72-282 1-209 (209)
9 3hvu_A Hypoxanthine phosphorib 99.3 8.8E-11 3E-15 102.6 14.7 120 96-240 35-159 (204)
10 3o7m_A Hypoxanthine phosphorib 99.3 6.4E-11 2.2E-15 102.0 13.6 119 97-240 14-137 (186)
11 3ohp_A Hypoxanthine phosphorib 99.3 6.9E-11 2.4E-15 101.0 13.6 119 97-239 10-133 (177)
12 2ywu_A Hypoxanthine-guanine ph 99.3 6.9E-11 2.4E-15 101.3 13.1 120 95-239 13-137 (181)
13 1wd5_A Hypothetical protein TT 99.2 2.6E-10 8.7E-15 99.3 13.2 111 144-260 25-180 (208)
14 2geb_A Hypoxanthine-guanine ph 99.2 2.4E-10 8.2E-15 97.8 12.0 120 96-240 17-141 (185)
15 3ozf_A Hypoxanthine-guanine-xa 99.1 2.4E-10 8.1E-15 102.8 11.3 120 96-240 64-199 (250)
16 1z7g_A HGPRT, HGPRTASE, hypoxa 99.1 2E-10 6.9E-15 100.9 9.8 130 93-249 33-176 (217)
17 1yfz_A Hypoxanthine-guanine ph 99.1 8.4E-10 2.9E-14 95.9 10.9 110 143-258 61-175 (205)
18 1tc1_A Protein (hypoxanthine p 99.0 8.5E-10 2.9E-14 97.3 10.6 124 97-239 13-145 (220)
19 1hgx_A HGXPRTASE, hypoxanthine 99.0 7.5E-10 2.5E-14 94.4 9.6 135 96-258 15-153 (183)
20 2jbh_A Phosphoribosyltransfera 99.0 4.1E-10 1.4E-14 99.4 8.3 120 95-239 43-176 (225)
21 1vdm_A Purine phosphoribosyltr 99.0 1.3E-09 4.4E-14 89.9 10.6 94 144-239 28-125 (153)
22 1dku_A Protein (phosphoribosyl 99.0 4E-10 1.4E-14 104.6 8.3 112 142-258 167-280 (317)
23 1pzm_A HGPRT, hypoxanthine-gua 99.0 1E-09 3.5E-14 96.1 9.2 140 96-258 28-175 (211)
24 1fsg_A HGPRTASE, hypoxanthine- 99.0 1.6E-09 5.5E-14 96.2 8.9 119 96-239 50-184 (233)
25 1w30_A PYRR bifunctional prote 98.9 4.4E-09 1.5E-13 91.3 10.3 125 96-237 17-153 (201)
26 1u9y_A RPPK;, ribose-phosphate 98.9 5.4E-09 1.8E-13 95.5 10.4 100 142-247 155-257 (284)
27 2aee_A OPRT, oprtase, orotate 98.9 1.4E-09 4.9E-14 94.8 5.8 118 145-269 71-193 (211)
28 1a3c_A PYRR, pyrimidine operon 98.9 4.5E-09 1.5E-13 89.1 8.2 93 143-237 33-139 (181)
29 1ufr_A TT1027, PYR mRNA-bindin 98.9 7.6E-09 2.6E-13 87.9 9.6 114 143-263 33-158 (181)
30 3s5j_B Ribose-phosphate pyroph 98.9 7.5E-09 2.6E-13 96.3 10.1 113 142-259 163-277 (326)
31 3dah_A Ribose-phosphate pyroph 98.8 9.8E-09 3.4E-13 95.3 9.4 113 142-259 166-280 (319)
32 3acd_A Hypoxanthine-guanine ph 98.8 2.3E-08 7.9E-13 85.6 10.6 117 97-238 15-136 (181)
33 2ji4_A Phosphoribosyl pyrophos 98.7 4.6E-08 1.6E-12 92.8 9.9 113 142-257 191-334 (379)
34 2xbu_A Hypoxanthine-guanine ph 98.6 1.4E-07 4.9E-12 83.0 10.0 95 144-238 31-161 (221)
35 3lrt_A Ribose-phosphate pyroph 98.6 4E-07 1.4E-11 83.3 12.2 97 142-243 153-251 (286)
36 1y0b_A Xanthine phosphoribosyl 98.5 7.3E-07 2.5E-11 76.4 11.8 96 145-246 56-171 (197)
37 1zn8_A APRT, adenine phosphori 98.5 7.7E-07 2.6E-11 75.2 11.0 94 145-244 60-169 (180)
38 2dy0_A APRT, adenine phosphori 98.5 7.2E-07 2.5E-11 76.3 9.9 102 145-254 66-183 (190)
39 1l1q_A Adenine phosphoribosylt 98.4 1.7E-06 5.8E-11 73.7 11.2 95 145-245 56-169 (186)
40 1g2q_A Adenine phosphoribosylt 98.4 1.6E-06 5.5E-11 73.9 10.1 95 144-243 61-170 (187)
41 2p1z_A Phosphoribosyltransfera 98.4 1.3E-06 4.5E-11 74.2 9.5 102 145-254 66-170 (180)
42 3asz_A Uridine kinase; cytidin 98.4 4.1E-07 1.4E-11 77.6 6.2 67 1-67 125-209 (211)
43 1dqn_A Guanine phosphoribosylt 98.3 1.4E-07 4.7E-12 83.7 2.7 106 143-255 62-171 (230)
44 2yzk_A OPRT, oprtase, orotate 98.3 2.4E-06 8.3E-11 72.3 10.3 101 144-255 60-163 (178)
45 1qb7_A APRT, adenine phosphori 98.3 2.9E-06 1E-10 75.2 10.9 113 145-262 74-209 (236)
46 1vch_A Phosphoribosyltransfera 98.2 1.6E-06 5.6E-11 72.7 6.8 90 145-239 55-162 (175)
47 2wns_A Orotate phosphoribosylt 98.2 4.9E-06 1.7E-10 72.1 10.0 101 145-255 65-168 (205)
48 3m3h_A OPRT, oprtase, orotate 98.2 8.6E-06 2.9E-10 72.3 10.8 100 145-254 91-194 (234)
49 3dez_A OPRT, oprtase, orotate 98.2 1.1E-05 3.6E-10 72.1 11.5 94 145-246 103-200 (243)
50 2jeo_A Uridine-cytidine kinase 98.2 2E-06 6.8E-11 75.7 6.5 64 1-65 154-235 (245)
51 2ps1_A Orotate phosphoribosylt 98.2 7.2E-06 2.5E-10 72.1 9.7 88 145-237 70-165 (226)
52 1nul_A XPRT, xanthine-guanine 98.1 3.2E-06 1.1E-10 69.8 5.7 86 145-239 31-118 (152)
53 3mjd_A Orotate phosphoribosylt 98.1 7.3E-06 2.5E-10 72.7 7.9 87 145-238 84-177 (232)
54 3n2l_A OPRT, oprtase, orotate 98.1 2.1E-05 7.2E-10 70.0 10.7 104 145-255 91-206 (238)
55 1lh0_A OMP synthase; loop clos 97.9 1.4E-05 4.9E-10 69.6 6.2 86 145-238 66-158 (213)
56 1o57_A PUR operon repressor; p 97.9 2.3E-05 7.8E-10 71.7 7.4 90 145-239 133-238 (291)
57 1ecf_A Glutamine phosphoribosy 97.8 5E-05 1.7E-09 74.3 8.0 87 144-233 296-395 (504)
58 1ao0_A Glutamine phosphoribosy 97.7 3.3E-05 1.1E-09 74.7 5.2 84 145-232 276-373 (459)
59 1a7j_A Phosphoribulokinase; tr 97.6 2.1E-05 7E-10 71.6 3.1 37 1-37 148-184 (290)
60 1uj2_A Uridine-cytidine kinase 97.6 6.1E-05 2.1E-09 66.3 5.6 65 1-65 151-233 (252)
61 3qw4_B UMP synthase; N-termina 97.2 0.00069 2.4E-08 65.5 8.3 100 145-254 319-421 (453)
62 1jjv_A Dephospho-COA kinase; P 97.1 0.00054 1.8E-08 57.8 5.5 60 1-64 124-195 (206)
63 2f6r_A COA synthase, bifunctio 96.7 0.0023 7.9E-08 57.4 6.3 56 1-60 200-267 (281)
64 4i1u_A Dephospho-COA kinase; s 96.6 0.0031 1E-07 54.9 6.4 43 1-47 132-187 (210)
65 3tqc_A Pantothenate kinase; bi 96.3 0.00055 1.9E-08 63.3 -0.3 40 1-40 227-269 (321)
66 3lw7_A Adenylate kinase relate 96.3 0.006 2E-07 48.8 5.9 60 2-61 103-176 (179)
67 1q3t_A Cytidylate kinase; nucl 95.7 0.018 6.2E-07 49.7 6.3 34 1-35 153-188 (236)
68 3c8u_A Fructokinase; YP_612366 95.4 0.01 3.5E-07 50.3 3.9 42 1-43 148-189 (208)
69 2if2_A Dephospho-COA kinase; a 95.3 0.031 1.1E-06 46.6 6.5 56 1-65 124-191 (204)
70 2ga8_A Hypothetical 39.9 kDa p 95.2 0.0094 3.2E-07 55.9 3.2 41 3-44 291-333 (359)
71 1uf9_A TT1252 protein; P-loop, 95.1 0.028 9.7E-07 46.5 5.6 54 2-63 126-191 (203)
72 1vht_A Dephospho-COA kinase; s 95.1 0.031 1.1E-06 47.2 5.9 59 1-63 126-196 (218)
73 1odf_A YGR205W, hypothetical 3 95.0 0.0087 3E-07 54.2 2.0 41 2-43 204-250 (290)
74 4e22_A Cytidylate kinase; P-lo 94.7 0.048 1.6E-06 47.8 6.2 62 2-63 164-246 (252)
75 1cke_A CK, MSSA, protein (cyti 94.6 0.05 1.7E-06 46.0 5.9 32 1-33 141-174 (227)
76 1sq5_A Pantothenate kinase; P- 94.0 0.032 1.1E-06 50.5 3.4 37 1-37 215-254 (308)
77 2h92_A Cytidylate kinase; ross 93.9 0.1 3.5E-06 43.9 6.2 32 2-34 137-170 (219)
78 3ake_A Cytidylate kinase; CMP 93.6 0.13 4.5E-06 42.5 6.4 42 1-46 136-192 (208)
79 3r20_A Cytidylate kinase; stru 93.1 0.1 3.5E-06 45.8 5.1 60 2-64 147-226 (233)
80 2grj_A Dephospho-COA kinase; T 92.7 0.081 2.8E-06 44.8 3.7 44 1-48 130-173 (192)
81 3aez_A Pantothenate kinase; tr 92.3 0.03 1E-06 51.1 0.5 38 1-38 218-258 (312)
82 2pbr_A DTMP kinase, thymidylat 91.9 0.19 6.6E-06 40.8 5.0 60 1-60 123-190 (195)
83 3fdi_A Uncharacterized protein 90.2 0.34 1.2E-05 41.0 5.0 28 3-34 119-146 (201)
84 2z0h_A DTMP kinase, thymidylat 89.0 0.23 8E-06 40.6 3.0 58 2-63 123-189 (197)
85 3hdt_A Putative kinase; struct 88.7 0.68 2.3E-05 40.0 5.9 28 3-34 139-166 (223)
86 3a00_A Guanylate kinase, GMP k 88.0 0.34 1.2E-05 39.9 3.4 53 3-60 116-183 (186)
87 2pt5_A Shikimate kinase, SK; a 87.9 0.53 1.8E-05 37.4 4.5 62 2-69 94-167 (168)
88 3t61_A Gluconokinase; PSI-biol 87.6 1.1 3.7E-05 37.0 6.3 62 2-69 112-183 (202)
89 1ukz_A Uridylate kinase; trans 87.3 0.99 3.4E-05 37.1 5.9 22 2-23 122-143 (203)
90 3vaa_A Shikimate kinase, SK; s 87.0 1.3 4.5E-05 36.6 6.6 62 2-63 119-197 (199)
91 2qor_A Guanylate kinase; phosp 86.4 1.1 3.9E-05 37.1 5.8 56 3-63 128-198 (204)
92 2bwj_A Adenylate kinase 5; pho 86.1 1.3 4.4E-05 36.1 5.9 22 2-23 117-138 (199)
93 2jaq_A Deoxyguanosine kinase; 85.1 1.3 4.6E-05 36.0 5.6 25 2-31 126-150 (205)
94 2qt1_A Nicotinamide riboside k 84.8 1.4 4.7E-05 36.5 5.5 22 1-22 130-151 (207)
95 3kb2_A SPBC2 prophage-derived 83.4 2.4 8.2E-05 33.4 6.2 60 2-62 96-167 (173)
96 1tev_A UMP-CMP kinase; ploop, 81.3 2.9 9.8E-05 33.5 6.1 22 2-23 115-136 (196)
97 2vp4_A Deoxynucleoside kinase; 81.2 1.9 6.6E-05 36.6 5.1 22 1-22 147-168 (230)
98 1via_A Shikimate kinase; struc 80.9 2 6.9E-05 34.4 4.9 62 2-66 94-167 (175)
99 1zuh_A Shikimate kinase; alpha 80.9 0.94 3.2E-05 36.1 2.9 57 2-62 98-166 (168)
100 1y63_A LMAJ004144AAA protein; 79.1 1.9 6.5E-05 35.2 4.3 20 2-21 102-121 (184)
101 1qf9_A UMP/CMP kinase, protein 78.5 4.3 0.00015 32.4 6.2 22 2-23 112-133 (194)
102 1kgd_A CASK, peripheral plasma 77.9 0.69 2.4E-05 37.8 1.2 57 3-61 119-178 (180)
103 3lv8_A DTMP kinase, thymidylat 77.5 4.3 0.00015 35.2 6.3 65 1-65 155-232 (236)
104 4eun_A Thermoresistant glucoki 76.7 3 0.0001 34.4 4.8 56 3-64 127-192 (200)
105 3trf_A Shikimate kinase, SK; a 76.2 1.5 5E-05 35.4 2.7 59 3-63 100-176 (185)
106 2c95_A Adenylate kinase 1; tra 76.0 6.5 0.00022 31.5 6.7 21 2-22 114-134 (196)
107 1e6c_A Shikimate kinase; phosp 76.0 1.6 5.4E-05 34.7 2.8 59 2-64 95-169 (173)
108 1kag_A SKI, shikimate kinase I 76.0 2.5 8.5E-05 33.6 4.0 60 2-64 98-171 (173)
109 1kht_A Adenylate kinase; phosp 75.8 4.5 0.00015 32.3 5.6 21 2-22 116-136 (192)
110 3iij_A Coilin-interacting nucl 74.8 5.8 0.0002 31.7 6.0 21 2-22 98-118 (180)
111 2wwf_A Thymidilate kinase, put 74.5 2.5 8.6E-05 34.7 3.8 58 2-65 132-199 (212)
112 2iyv_A Shikimate kinase, SK; t 73.5 2.2 7.4E-05 34.4 3.1 61 2-65 95-168 (184)
113 1nn5_A Similar to deoxythymidy 72.3 3.3 0.00011 33.9 4.0 61 2-64 131-203 (215)
114 3ld9_A DTMP kinase, thymidylat 72.1 1.3 4.5E-05 38.3 1.5 60 1-63 146-217 (223)
115 4edh_A DTMP kinase, thymidylat 72.1 3.7 0.00013 34.9 4.3 62 2-63 133-208 (213)
116 3tr0_A Guanylate kinase, GMP k 71.6 8.8 0.0003 31.1 6.5 56 3-60 120-185 (205)
117 4tmk_A Protein (thymidylate ki 69.7 10 0.00036 32.1 6.7 21 2-22 134-154 (213)
118 2yvu_A Probable adenylyl-sulfa 65.1 6.4 0.00022 31.7 4.2 60 2-62 114-184 (186)
119 3hjn_A DTMP kinase, thymidylat 65.0 4.6 0.00016 33.7 3.4 36 2-37 123-158 (197)
120 1zak_A Adenylate kinase; ATP:A 64.0 7.7 0.00026 32.2 4.7 21 2-22 110-130 (222)
121 4eaq_A DTMP kinase, thymidylat 64.0 15 0.0005 31.2 6.5 62 2-64 150-227 (229)
122 3nwj_A ATSK2; P loop, shikimat 63.6 9.4 0.00032 33.3 5.3 19 2-20 143-161 (250)
123 4hlc_A DTMP kinase, thymidylat 63.2 14 0.00048 30.9 6.2 21 2-22 126-146 (205)
124 2plr_A DTMP kinase, probable t 63.1 8.7 0.0003 31.1 4.7 21 2-22 123-144 (213)
125 2rhm_A Putative kinase; P-loop 61.9 8.3 0.00028 30.8 4.3 63 2-64 106-187 (193)
126 2cdn_A Adenylate kinase; phosp 61.4 13 0.00046 30.1 5.6 20 2-21 128-147 (201)
127 1knq_A Gluconate kinase; ALFA/ 61.4 17 0.00058 28.7 6.1 20 3-22 106-125 (175)
128 1nks_A Adenylate kinase; therm 58.2 18 0.00063 28.5 5.8 20 2-21 117-136 (194)
129 1p5z_B DCK, deoxycytidine kina 58.0 19 0.00065 30.8 6.2 20 2-21 176-195 (263)
130 2pez_A Bifunctional 3'-phospho 57.6 3.4 0.00012 33.2 1.2 61 2-65 106-175 (179)
131 2v54_A DTMP kinase, thymidylat 57.2 10 0.00035 30.6 4.2 59 2-64 123-193 (204)
132 3a4m_A L-seryl-tRNA(SEC) kinas 56.3 49 0.0017 28.2 8.6 59 2-65 101-173 (260)
133 3d3q_A TRNA delta(2)-isopenten 52.1 4.1 0.00014 37.5 0.9 38 5-46 118-166 (340)
134 3dl0_A Adenylate kinase; phosp 51.8 34 0.0012 27.9 6.6 21 1-21 107-127 (216)
135 2ocp_A DGK, deoxyguanosine kin 51.7 39 0.0013 28.3 7.1 21 1-21 150-170 (241)
136 2jfz_A Glutamate racemase; cel 51.3 20 0.00068 31.0 5.2 78 152-254 11-91 (255)
137 2vli_A Antibiotic resistance p 46.8 31 0.0011 27.1 5.4 18 5-22 109-126 (183)
138 3v9p_A DTMP kinase, thymidylat 46.8 27 0.00092 29.9 5.3 21 2-22 153-173 (227)
139 3lnc_A Guanylate kinase, GMP k 45.8 18 0.00062 30.1 4.0 18 3-20 142-159 (231)
140 3dah_A Ribose-phosphate pyroph 43.3 1.1E+02 0.0036 27.7 9.0 79 150-234 13-95 (319)
141 3hix_A ALR3790 protein; rhodan 42.8 58 0.002 23.6 6.1 47 194-250 51-97 (106)
142 3fb4_A Adenylate kinase; psych 41.5 33 0.0011 27.9 4.9 21 1-21 107-127 (216)
143 3tum_A Shikimate dehydrogenase 40.5 44 0.0015 29.4 5.8 55 192-252 122-178 (269)
144 3uie_A Adenylyl-sulfate kinase 40.1 12 0.00042 30.5 1.9 62 3-66 125-195 (200)
145 1m7g_A Adenylylsulfate kinase; 39.8 9.4 0.00032 31.5 1.2 62 2-67 133-204 (211)
146 3out_A Glutamate racemase; str 39.7 18 0.00062 31.8 3.1 82 152-254 18-99 (268)
147 3cm0_A Adenylate kinase; ATP-b 39.2 55 0.0019 25.7 5.8 21 2-22 107-127 (186)
148 3hnn_A Putative diflavin flavo 37.9 61 0.0021 27.5 6.2 57 196-257 51-113 (262)
149 1gmx_A GLPE protein; transfera 36.7 50 0.0017 24.0 4.8 45 194-248 57-101 (108)
150 2jtq_A Phage shock protein E; 35.9 60 0.002 22.4 4.9 33 194-231 40-72 (85)
151 3jyo_A Quinate/shikimate dehyd 35.7 45 0.0015 29.4 5.1 35 192-232 124-158 (283)
152 1sby_A Alcohol dehydrogenase; 34.7 1.6E+02 0.0055 24.3 8.4 55 193-252 3-57 (254)
153 3t4e_A Quinate/shikimate dehyd 34.7 52 0.0018 29.6 5.4 35 192-232 145-179 (312)
154 3dfz_A SIRC, precorrin-2 dehyd 32.9 72 0.0025 27.2 5.8 56 191-255 27-82 (223)
155 1ex7_A Guanylate kinase; subst 32.7 55 0.0019 26.9 4.9 52 3-59 116-182 (186)
156 1u9y_A RPPK;, ribose-phosphate 32.5 2.3E+02 0.008 24.7 9.3 77 151-233 7-86 (284)
157 1qh5_A Glyoxalase II, protein 32.1 96 0.0033 26.5 6.6 52 195-256 22-79 (260)
158 4gud_A Imidazole glycerol phos 31.9 79 0.0027 25.8 5.8 52 196-276 3-54 (211)
159 2gcu_A Putative hydroxyacylglu 31.7 1.3E+02 0.0044 25.4 7.2 56 195-258 27-88 (245)
160 1qhx_A CPT, protein (chloramph 31.3 79 0.0027 24.5 5.5 54 3-63 115-176 (178)
161 2gzm_A Glutamate racemase; enz 30.5 39 0.0013 29.4 3.7 82 151-254 13-94 (267)
162 3ix9_A Dihydrofolate reductase 29.1 1.6E+02 0.0055 24.3 7.2 53 209-281 101-153 (190)
163 3s5j_B Ribose-phosphate pyroph 28.8 2.8E+02 0.0096 25.0 9.3 78 151-234 10-91 (326)
164 2v6z_M DNA polymerase epsilon 28.7 42 0.0014 25.3 3.1 56 5-61 21-78 (99)
165 3ilm_A ALR3790 protein; rhodan 28.3 79 0.0027 24.4 4.9 43 194-246 55-97 (141)
166 3pwz_A Shikimate dehydrogenase 28.2 1.1E+02 0.0039 26.6 6.4 49 192-248 117-165 (272)
167 1vp8_A Hypothetical protein AF 28.2 1.6E+02 0.0056 24.9 7.0 47 206-256 27-73 (201)
168 1ak2_A Adenylate kinase isoenz 28.1 1.3E+02 0.0045 24.7 6.6 21 2-22 124-144 (233)
169 4gow_A Potassium voltage-gated 28.1 19 0.00065 25.3 0.9 25 13-37 13-44 (72)
170 1zd8_A GTP:AMP phosphotransfer 28.0 82 0.0028 25.8 5.2 21 2-22 109-129 (227)
171 1m8p_A Sulfate adenylyltransfe 27.7 20 0.00067 35.2 1.4 62 3-68 498-569 (573)
172 3tau_A Guanylate kinase, GMP k 27.4 37 0.0013 27.8 2.9 54 3-61 122-188 (208)
173 3bzs_A ESCU; auto cleavage pro 27.4 35 0.0012 27.2 2.6 89 9-107 19-128 (137)
174 2x5n_A SPRPN10, 26S proteasome 27.1 1.2E+02 0.0042 24.7 6.1 47 197-247 109-159 (192)
175 3tmk_A Thymidylate kinase; pho 26.7 42 0.0014 28.4 3.1 17 2-18 127-144 (216)
176 2jlj_A YSCU, YOP proteins tran 26.4 39 0.0013 27.2 2.7 90 9-108 18-128 (144)
177 3gk5_A Uncharacterized rhodane 26.0 1.4E+02 0.0046 21.6 5.6 46 194-250 54-99 (108)
178 3s99_A Basic membrane lipoprot 25.9 1.2E+02 0.004 27.5 6.3 54 198-255 63-116 (356)
179 3tnl_A Shikimate dehydrogenase 24.9 97 0.0033 27.8 5.4 35 192-232 151-185 (315)
180 4efz_A Metallo-beta-lactamase 24.4 3.3E+02 0.011 23.2 9.0 66 182-256 17-96 (298)
181 2hhg_A Hypothetical protein RP 24.2 1E+02 0.0035 23.2 4.8 43 194-246 85-127 (139)
182 1boo_A Protein (N-4 cytosine-s 24.1 34 0.0012 30.6 2.1 39 198-245 254-292 (323)
183 1c3p_A Protein (HDLP (histone 23.8 63 0.0022 29.9 4.0 61 210-277 146-207 (375)
184 3fbt_A Chorismate mutase and s 23.7 75 0.0026 28.0 4.4 47 192-246 119-165 (282)
185 1eg2_A Modification methylase 23.5 37 0.0013 30.5 2.3 68 198-280 244-314 (319)
186 2qed_A Hydroxyacylglutathione 23.5 2.2E+02 0.0074 24.1 7.3 54 195-258 28-87 (258)
187 1h7n_A 5-aminolaevulinic acid 23.5 1.9E+02 0.0066 26.4 7.0 49 209-259 69-136 (342)
188 2vw8_A PA1000, PQSE; quinolone 23.3 99 0.0034 26.6 5.0 60 195-257 33-97 (303)
189 3zq6_A Putative arsenical pump 23.2 2.4E+02 0.0082 24.7 7.7 83 196-282 224-321 (324)
190 1s96_A Guanylate kinase, GMP k 23.2 1.6E+02 0.0053 24.6 6.2 53 3-60 131-196 (219)
191 3eod_A Protein HNR; response r 23.2 1.4E+02 0.0047 21.3 5.2 19 193-211 5-23 (130)
192 2oho_A Glutamate racemase; iso 23.1 1.2E+02 0.0042 26.2 5.6 82 151-254 22-103 (273)
193 3ca8_A Protein YDCF; two domai 23.0 74 0.0025 27.9 4.1 59 193-251 112-171 (266)
194 3foj_A Uncharacterized protein 22.9 1.2E+02 0.0041 21.5 4.7 27 194-223 55-81 (100)
195 2fqx_A Membrane lipoprotein TM 22.6 1.5E+02 0.0052 25.7 6.2 55 196-255 38-92 (318)
196 1dek_A Deoxynucleoside monopho 22.6 33 0.0011 29.7 1.7 46 2-47 169-226 (241)
197 3ug7_A Arsenical pump-driving 22.6 2.2E+02 0.0076 25.3 7.4 83 195-281 238-335 (349)
198 3m8t_A 'BLR6230 protein; subcl 22.2 1.1E+02 0.0037 25.9 5.0 58 196-258 64-127 (294)
199 3iwh_A Rhodanese-like domain p 21.5 83 0.0028 23.0 3.6 27 194-223 55-81 (103)
200 3ch4_B Pmkase, phosphomevalona 21.2 23 0.00079 30.0 0.4 42 4-48 130-176 (202)
201 1zuw_A Glutamate racemase 1; ( 21.0 1.3E+02 0.0044 26.1 5.3 81 152-254 14-95 (272)
202 1z63_A Helicase of the SNF2/RA 20.9 2.1E+02 0.0072 26.3 7.1 58 195-254 56-116 (500)
203 2jfq_A Glutamate racemase; cel 20.9 1.2E+02 0.0041 26.5 5.1 77 153-254 34-113 (286)
204 3f6p_A Transcriptional regulat 20.8 2.1E+02 0.0071 20.1 5.8 12 196-207 3-14 (120)
205 3rqi_A Response regulator prot 20.7 1.5E+02 0.005 23.1 5.2 17 193-209 5-21 (184)
206 1ly1_A Polynucleotide kinase; 20.7 78 0.0027 24.4 3.5 33 3-37 108-140 (181)
207 1g60_A Adenine-specific methyl 20.5 46 0.0016 28.5 2.2 38 199-245 215-252 (260)
No 1
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=100.00 E-value=2e-67 Score=466.48 Aligned_cols=210 Identities=32% Similarity=0.536 Sum_probs=200.9
Q ss_pred CCCceeeecCchHHHHHhHhhhcCCCChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeeec-cceeEEEe
Q 023344 71 IYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFC-KKLCGVSI 149 (283)
Q Consensus 71 ~~~~v~vl~~~~~l~~llt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~~-~~i~~V~I 149 (283)
.++|+|+++| |+++||+|+|||++|++.+||++++||+++|+|||++++|+++++|+||+| .++|..+. +++|+|||
T Consensus 7 ~~~~v~v~~h-p~i~~~lt~lRd~~t~~~~Fr~~~~rl~~lL~yEa~~~lp~~~~~V~TP~g-~~~g~~~~~~~i~~V~I 84 (217)
T 3dmp_A 7 RFPNLFILDH-PLIQHKLTHMRDKDTSTRTFRELLREITLLMGYEITRNLPITTKRVETPLV-EIDAPVIAGKKLAIVPV 84 (217)
T ss_dssp TCTTEEEECC-HHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEECSSC-EEEEEEECGGGEEEEEE
T ss_pred CCCCeEecCC-HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhcCCceeEEEECCCe-EEEEEEecCCcEEEEEe
Confidence 3578999998 589999999999999999999999999999999999999999999999999 58899886 89999999
Q ss_pred cccchHHHHHHHHhccCceeeeEEEEecCCCCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEE
Q 023344 150 VRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHII 229 (283)
Q Consensus 150 lRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~ 229 (283)
+|+|++|++++++++|++++|+|++|||+.|.++.||.++| ++++++|||+|||+|||+|+++|++.|+++|+||++|+
T Consensus 85 lRaG~~m~~~l~~~ip~a~vg~i~~~Rd~~t~p~~~~~~lP-~i~~~~VilvD~~laTG~T~~~ai~~L~~~G~pe~~I~ 163 (217)
T 3dmp_A 85 LRAGVGMSDGLLELIPSARVGHIGVYRADDHRPVEYLVRLP-DLEDRIFILCDPMVATGYSAAHAIDVLKRRGVPGERLM 163 (217)
T ss_dssp ETTTHHHHHHHHHHCTTSEECEEECSCCCSSSCCCSEEECC-CCTTCEEEEECSEESSSHHHHHHHHHHHTTTCCGGGEE
T ss_pred cccchHHHHHHHHhCcCCceeEEEEEECCCCCcEEEeecCC-CCCCCEEEEEcCcccccHHHHHHHHHHHHcCCCcCeEE
Confidence 99999999999999999999999999999987788999999 99999999999999999999999999999999989999
Q ss_pred EEEEeeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCchhhhccCCCC
Q 023344 230 FLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD 283 (283)
Q Consensus 230 ~v~~vas~~gl~~l~~~~P~v~I~ta~iD~~ln~~~~ivPGlGd~GdR~fgt~~ 283 (283)
++|++++++|++++.++||+|+||||+||++||++|||+|||||||||||||+.
T Consensus 164 ~~~~vaa~egl~~l~~~~P~v~i~ta~iD~~Lne~~yIvPGlGDaGDR~fgt~~ 217 (217)
T 3dmp_A 164 FLALVAAPEGVQVFQDAHPDVKLYVASLDSHLDDHAYIVPGLGDAGDRLFGTKN 217 (217)
T ss_dssp EECSEECHHHHHHHHHHCTTCEEEESEECCEECTTSCEESSCSCHHHHHHC---
T ss_pred EEEEEeCHHHHHHHHHHCCCCEEEEEEecCCcCCCCCccCCCCCHHHhhcCCCC
Confidence 999999999999999999999999999999999999999999999999999974
No 2
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=100.00 E-value=1.5e-65 Score=461.37 Aligned_cols=217 Identities=53% Similarity=0.966 Sum_probs=209.2
Q ss_pred cccccCCCceeeecCchHHHHHhHhhhcCCCChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeeecccee
Q 023344 66 HDLCKIYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLC 145 (283)
Q Consensus 66 ~~~~~~~~~v~vl~~~~~l~~llt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~~~~i~ 145 (283)
++++++++||+++.++|+++||+|+|||++|++.+||++++||++||+|||++++|+++++|+||+|.++.|..+.+++|
T Consensus 26 ~~~~~~~~~v~~~~~hp~i~~~lt~lRd~~t~~~~Fr~~~~rl~~ll~yEa~~~lp~~~~~v~TP~g~~~~g~~~~~~l~ 105 (243)
T 1bd3_D 26 QDIITRFPNVVLMKQTAQLRAMMTIIRDKETPKEEFVFYADRLIRLLIEEALNELPFQKKEVTTPLDVSYHGVSFYSKIC 105 (243)
T ss_dssp HHHHHHCTTEEECCCCHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTSCEEEEEEECTTSCEEEEEEECCCEE
T ss_pred cccccCCCcEEEecCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCceeEEEECCCcceEeeeeccCcEE
Confidence 34567889999997677999999999999999999999999999999999999999999999999998899988889999
Q ss_pred EEEecccchHHHHHHHHhccCceeeeEEEEecCCCC-ceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCC
Q 023344 146 GVSIVRSGESMENALRACCKGIKIGKILIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVP 224 (283)
Q Consensus 146 ~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t~-~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~ 224 (283)
+|+|||+|++|++++++++|++++|||+++||+.|+ +++||.++|.++++++|||+|||+|||+|+.+|++.|+++|++
T Consensus 106 ~V~ILRaG~~m~~~l~~~ip~a~vg~I~~~Rd~~t~~~~~~~~~lp~di~~r~VilvDdmlaTG~T~~~ai~~L~~~G~~ 185 (243)
T 1bd3_D 106 GVSIVRAGESMESGLRAVCRGVRIGKILIQRDETTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVK 185 (243)
T ss_dssp EEEEETTTHHHHHHHHHHSTTCCEEEEEEEECSSSCCEEEEEEECCTTGGGSEEEEECSEESSCHHHHHHHHHHHHHTCC
T ss_pred EEEEEcchHHHHHHHHHhCCcCeeeeEEEEEcCCCCCeEEEeccCCcccCCCEEEEECCccccHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999998 7889999999999999999999999999999999999999997
Q ss_pred CccEEEEEEeeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCchhhhccCCC
Q 023344 225 ESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 282 (283)
Q Consensus 225 e~~I~~v~~vas~~gl~~l~~~~P~v~I~ta~iD~~ln~~~~ivPGlGd~GdR~fgt~ 282 (283)
+++|.++|++++++|++++.++||+++|||++||++||++|||+|||||||||||||+
T Consensus 186 p~~I~~~~lvaap~g~~~l~~~~p~v~I~ta~ID~~Lne~~yIvPGlGDaGDR~fGt~ 243 (243)
T 1bd3_D 186 EERIIFVNILAAPQGIERVFKEYPKVRMVTAAVDICLNSRYYIVPGIGDFGDRYFGTM 243 (243)
T ss_dssp GGGEEEEEEEECHHHHHHHHHHCTTSEEEEEEECSEECTTCCEESCCSCHHHHHHTCC
T ss_pred cceEEEEEEEeCHHHHHHHHHHCCCCEEEEEEecCCcCCCceecCCCCcHHHhhcCCC
Confidence 7999999999999999999999999999999999999999999999999999999985
No 3
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*
Probab=100.00 E-value=2.1e-64 Score=446.95 Aligned_cols=203 Identities=27% Similarity=0.423 Sum_probs=194.5
Q ss_pred ceeeecCchHHHHHhHhhhcCCCChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeee-c-cceeEEEecc
Q 023344 74 NVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDF-C-KKLCGVSIVR 151 (283)
Q Consensus 74 ~v~vl~~~~~l~~llt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~-~-~~i~~V~IlR 151 (283)
|+|+++|| +++||+|+|||++|++.+||++++||++||+|||+++||+++++|+||+|.++.|... . +++|+|||+|
T Consensus 2 ~v~v~~hp-~~~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~yEa~~~l~~~~~~v~TP~g~~~~~~~~~~~~~i~iV~IlR 80 (216)
T 1xtt_A 2 PLYVIDKP-ITLHILTQLRDKYTDQINFRKNLVRLGRILGYEISNTLDYEIVEVETPLGVKTKGVDITDLNNIVIINILR 80 (216)
T ss_dssp CEEECCCH-HHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTSCCEEEEEECTTSCEEEEEECGGGGSEEEEEEET
T ss_pred ceEEcCCH-HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhhCCceeEEEECCCccEecceEecCCCcEEEEeecC
Confidence 69999975 7999999999999999999999999999999999999999999999999987777534 4 7999999999
Q ss_pred cchHHHHHHHHhccCceeeeEEEEecCCC-------C-ceeEeccCCCCCCCc--EEEEEcCcccchHHHHHHHHHHHHc
Q 023344 152 SGESMENALRACCKGIKIGKILIHRDGDN-------G-KQLIYEKLPNDISER--HVLLLDPVLATGNSANQAIQLLIEK 221 (283)
Q Consensus 152 aG~~m~~~l~~~~p~a~~G~i~i~R~~~t-------~-~~~~y~~lP~~i~~~--~Vil~Dp~iaTG~t~~~ai~~L~~~ 221 (283)
||++|++++++++|++++|+|+++||+.| . |..||.++| +++++ +|+|+|||+|||+|+.+|++.|++
T Consensus 81 aG~~m~~gl~~~lp~a~vg~I~~~Rd~~t~~~~~~~~~p~~~y~klP-~i~~~~~~VilvDp~laTG~T~~~ai~~L~~- 158 (216)
T 1xtt_A 81 AAVPLVEGLLKAFPKARQGVIGASRVEVDGKEVPKDMDVYIYYKKIP-DIRAKVDNVIIADPMIATASTMLKVLEEVVK- 158 (216)
T ss_dssp TTHHHHHHHHHHCTTCEEEEEEEEECCCCCSSCCSCCCEEEEEEECC-CCCTTTCEEEEECSEESSSHHHHHHHHHHGG-
T ss_pred CcHHHHHHHHHHcccCccceEEEEECCCcccccccccCceEeeccCC-CccCCcceEEEEcCCccchHHHHHHHHHHHh-
Confidence 99999999999999999999999999887 4 788999999 99999 999999999999999999999999
Q ss_pred CCCCccEEEEEEeeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCchhhhccC
Q 023344 222 GVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFG 280 (283)
Q Consensus 222 G~~e~~I~~v~~vas~~gl~~l~~~~P~v~I~ta~iD~~ln~~~~ivPGlGd~GdR~fg 280 (283)
|+| ++|.++|++++++|++++.++||+|+||||+||++||++|||+||||||||||||
T Consensus 159 G~p-~~I~~~~~vaa~~gl~~l~~~~P~v~I~ta~iD~~Lne~~yIvPGlGDaGDR~fg 216 (216)
T 1xtt_A 159 ANP-KRIYIVSIISSEYGVNKILSKYPFIYLFTVAIDPELNNKGYILPGLGDAGDRAFG 216 (216)
T ss_dssp GCC-SEEEEECSEEEHHHHHHHHHHCTTSEEEESEEESEECTTSCEESSCSCHHHHHHC
T ss_pred CCC-CeEEEEEEecCHHHHHHHHHHCCCcEEEEEEecCCcCCCCCccCCCCChHhhccC
Confidence 987 8999999999999999999999999999999999999999999999999999998
No 4
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=100.00 E-value=2.6e-63 Score=437.81 Aligned_cols=206 Identities=30% Similarity=0.424 Sum_probs=198.8
Q ss_pred CceeeecCchHHHHHhHhhhcCCCChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeeec-cceeEEEecc
Q 023344 73 PNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFC-KKLCGVSIVR 151 (283)
Q Consensus 73 ~~v~vl~~~~~l~~llt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~~-~~i~~V~IlR 151 (283)
+|+|+++| |+++|++|+|||++|++.+||++++||++||+|||++++|+++++|+||+| .+.|..+. +++|+|||||
T Consensus 1 ~~v~v~~h-p~i~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~~ea~~~l~~~~~~v~TP~~-~~~g~~~~g~~l~~V~ILr 78 (208)
T 2ehj_A 1 KKIVEVKH-PLVKHKLGLMREQDISTKRFRELASEVGSLLTYEATADLETEKVTIEGWNG-PVEIDQIKGKKITVVPILR 78 (208)
T ss_dssp CEEEECCC-HHHHHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEEETTE-EEEEEEECSSCCEEEEBTT
T ss_pred CCeEEcCC-HHHHHHHHHHHCCCCChHHHHHHHHHHHHHHHHHHHhcCCceEEEEECCCc-cEEEEEecCCceEEEEeec
Confidence 36899888 589999999999999999999999999999999999999999999999999 57888887 7999999999
Q ss_pred cchHHHHHHHHhccCceeeeEEEEecCCCC-ceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEE
Q 023344 152 SGESMENALRACCKGIKIGKILIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIF 230 (283)
Q Consensus 152 aG~~m~~~l~~~~p~a~~G~i~i~R~~~t~-~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~ 230 (283)
+|++|++++.+++|++++|+|+++||+.|+ ++.||.++|.++++++|+|+|||+|||+|+.+|++.|+++|+ ++|.+
T Consensus 79 aG~~~~~~l~~~ip~~~vg~i~~~rd~~t~~~~~~~~~lp~di~~r~VilvDd~laTG~T~~~ai~~L~~~G~--~~I~~ 156 (208)
T 2ehj_A 79 AGLGMMDGVLENVPSARISVVGMYRNEETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGC--SSIKV 156 (208)
T ss_dssp GGGGGHHHHHHHCTTCEECEEEEEECTTTCCEEEEEEECCSCGGGCEEEEEEEEESSCHHHHHHHHHHHHTTC--CEEEE
T ss_pred CHHHHHHHHHHhCCcCceeEEEEEEcCCCCceEEEecCCCCccCCCEEEEECCccccHHHHHHHHHHHHHcCC--CEEEE
Confidence 999999999999999999999999999988 788999999999999999999999999999999999999997 79999
Q ss_pred EEEeeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCchhhhccCCC
Q 023344 231 LNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 282 (283)
Q Consensus 231 v~~vas~~gl~~l~~~~P~v~I~ta~iD~~ln~~~~ivPGlGd~GdR~fgt~ 282 (283)
+|++++++|++++.++||+++|||++||++||++|||+|||||||||||||+
T Consensus 157 ~~lv~~p~g~~~l~~~~p~v~I~t~~iD~~lne~~yIvPGlGDaGDR~fgt~ 208 (208)
T 2ehj_A 157 LVLVAAPEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK 208 (208)
T ss_dssp EEEEECHHHHHHHHHHCTTSEEEESCBCSEECTTSCEESCCSCHHHHHHTCC
T ss_pred EEEEeCHHHHHHHHHHCCCcEEEEEecCCCCCCCceecCCCCcHHHhhcCCC
Confidence 9999999999999999999999999999999999999999999999999995
No 5
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=100.00 E-value=2.7e-63 Score=437.73 Aligned_cols=205 Identities=32% Similarity=0.510 Sum_probs=191.2
Q ss_pred ceeeecCchHHHHHhHhhhcCCCChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeeec-cceeEEEeccc
Q 023344 74 NVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFC-KKLCGVSIVRS 152 (283)
Q Consensus 74 ~v~vl~~~~~l~~llt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~~-~~i~~V~IlRa 152 (283)
++|+++| |+++||+|+|||++|++.+||++++||++||+|||++++|+++++|+||+| .++|..+. +++|+|||||+
T Consensus 2 ~v~v~~~-p~i~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~~ea~~~l~~~~~~v~TP~g-~~~g~~~~g~~l~~V~ILra 79 (208)
T 1v9s_A 2 RITLVDH-PLVQHKLAHLRDKRTGPKDFRELAEEVAMLMAYEAMRDLELEETTVETPIA-PARVKVLSGKKLALVAILRA 79 (208)
T ss_dssp CEEECCC-HHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEECSSS-EEEEEEECSSCCEEEEETTT
T ss_pred ceEEcCC-HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHccCCCeEEEEECCCc-eEEEEEecCCceEEEEeccc
Confidence 6899888 589999999999999999999999999999999999999999999999999 47888886 79999999999
Q ss_pred chHHHHHHHHhccCceeeeEEEEecCCCC-ceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEE
Q 023344 153 GESMENALRACCKGIKIGKILIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFL 231 (283)
Q Consensus 153 G~~m~~~l~~~~p~a~~G~i~i~R~~~t~-~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v 231 (283)
|++|++++.+++|++++|+|+++||+.|+ ++.||.++|.++++++|+|+|||+|||+|+.+|++.|+++|+ ++|.++
T Consensus 80 G~~~~~~l~~~ip~~~vg~I~~~rd~~t~~~~~~~~~lp~di~~r~vilvDd~laTG~T~~~ai~~L~~~G~--~~I~~~ 157 (208)
T 1v9s_A 80 GLVMVEGILKLVPHARVGHIGLYRDPESLNPVQYYIKLPPDIAERRAFLLDPMLATGGSASLALSLLKERGA--TGVKLM 157 (208)
T ss_dssp HHHHHHHHHTTCTTCEEEEEEEC---------CEEEECCSCGGGSCEEEECSEESSSHHHHHHHHHHHHTTC--CSCEEE
T ss_pred hHHHHHHHHHhCCCCeeeEEEEEEcCCCCCceEEeccCCCccCCCEEEEECCccccHHHHHHHHHHHHHcCC--CEEEEE
Confidence 99999999999999999999999999888 788999999999999999999999999999999999999997 799999
Q ss_pred EEeeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCchhhhccCCC
Q 023344 232 NLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 282 (283)
Q Consensus 232 ~~vas~~gl~~l~~~~P~v~I~ta~iD~~ln~~~~ivPGlGd~GdR~fgt~ 282 (283)
|++++++|++++.++||++.|||++||++||++|||+|||||||||||||+
T Consensus 158 ~lv~~~~g~~~l~~~~p~v~I~t~~iD~~lne~~yIvPGlGDaGDR~fgt~ 208 (208)
T 1v9s_A 158 AILAAPEGLERIAKDHPDTEVVVAAIDERLNDHGYIVPGLGDAGDRIYGTK 208 (208)
T ss_dssp EEEECHHHHHHHHHHCTTCEEEEEEECSEECTTSCEESSCSCHHHHHHTCC
T ss_pred EEEeCHHHHHHHHHHCCCcEEEEEeecCCCCCCceecCCCCcHHHhccCCC
Confidence 999999999999999999999999999999999999999999999999995
No 6
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=100.00 E-value=4.5e-62 Score=433.26 Aligned_cols=208 Identities=33% Similarity=0.489 Sum_probs=198.7
Q ss_pred CCCceeeecCchHHHHHhHhhhcCCCChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeeec-cceeEEEe
Q 023344 71 IYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFC-KKLCGVSI 149 (283)
Q Consensus 71 ~~~~v~vl~~~~~l~~llt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~~-~~i~~V~I 149 (283)
.++++++.+| |++++|+|+|||++|++.+||++++||++||+|||++++|+++++|+||+| .+.|..+. +++|+|||
T Consensus 12 ~~~~~~~~~~-p~i~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~yEa~~~lp~~~~~v~TP~g-~~~g~~~~g~~lviV~I 89 (221)
T 1o5o_A 12 HMKNLVVVDH-PLIKHKLTIMRDKNTGPKEFRELLREITLLLAYEATRHLKCEEVEVETPIT-KTIGYRINDKDIVVVPI 89 (221)
T ss_dssp CCTTEEECCC-HHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEECSSC-EEEEEECCSTTEEEEEE
T ss_pred ccceEEecCC-HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhcCCceEEEEECCCc-eEEEEEecCCeEEEEEE
Confidence 3556777766 589999999999999999999999999999999999999999999999999 47888887 79999999
Q ss_pred cccchHHHHHHHHhccCceeeeEEEEecCCCC-ceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccE
Q 023344 150 VRSGESMENALRACCKGIKIGKILIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHI 228 (283)
Q Consensus 150 lRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t~-~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I 228 (283)
+|+|++|++++.+++|++++|+|+++|++.|+ ++.||.++|.++++++|||+|||+|||+|+.+|++.|+++|+ ++|
T Consensus 90 lrgG~~~~~~l~~~lp~a~vg~I~~~Rd~~t~~~~~~~~~lp~di~gr~VilvDd~laTG~Tl~~ai~~L~~~G~--~~I 167 (221)
T 1o5o_A 90 LRAGLVMADGILELLPNASVGHIGIYRDPETLQAVEYYAKLPPLNDDKEVFLLDPMLATGVSSIKAIEILKENGA--KKI 167 (221)
T ss_dssp ETTHHHHHHHHHHHSTTCEECEEEEEECTTTCCEEEEEEECCCCCTTCEEEEECSEESSSHHHHHHHHHHHHTTC--CEE
T ss_pred ecchHHHHHHHHHhCCCCcEEEEEEEEcCCCCceeEEEecCCCccCCCEEEEECCccccHHHHHHHHHHHHHcCC--CEE
Confidence 99999999999999999999999999999887 678999999999999999999999999999999999999998 799
Q ss_pred EEEEEeeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCchhhhccCCC
Q 023344 229 IFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 282 (283)
Q Consensus 229 ~~v~~vas~~gl~~l~~~~P~v~I~ta~iD~~ln~~~~ivPGlGd~GdR~fgt~ 282 (283)
.++|++++++|++++.++||++.|||++||++||++|||+|||||||||||||+
T Consensus 168 ~~~~lv~~~~g~~~l~~~~p~v~I~t~~ID~~Lne~~yIvPGlGDaGDR~fGt~ 221 (221)
T 1o5o_A 168 TLVALIAAPEGVEAVEKKYEDVKIYVAALDERLNDHGYIIPGLGDAGDRLFRTK 221 (221)
T ss_dssp EEECSEECHHHHHHHHHHCTTCEEEESEECSEECTTSCEESSCSCHHHHHHTCC
T ss_pred EEEEEEeCHHHHHHHHHHCCCcEEEEEeccCCCCCCceecCCCCcHHHhccCCC
Confidence 999999999999999999999999999999999999999999999999999995
No 7
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=100.00 E-value=2.9e-60 Score=418.45 Aligned_cols=204 Identities=25% Similarity=0.380 Sum_probs=196.6
Q ss_pred eeeecCchHHHHHhHhhhcCCCChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeeec-cceeEEEecccc
Q 023344 75 VYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFC-KKLCGVSIVRSG 153 (283)
Q Consensus 75 v~vl~~~~~l~~llt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~~-~~i~~V~IlRaG 153 (283)
+|+++| |+++|++|+|||++|++.+||++++||++||+|||++++|+++.+|+||+|. +.|..+. +++|+|||||+|
T Consensus 2 v~~~~h-p~i~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~~ea~~~l~~~~~~v~TP~~~-~~~~~~~g~~~~~V~ILraG 79 (208)
T 2e55_A 2 IVELSH-PLIKHKVNTARIQDTSAEKLRKTLKELGFMLVYEALKDILLEEKEVRTWIGN-KRFNYLNEEEIVFVPILRAG 79 (208)
T ss_dssp EEECCC-HHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEEETTEE-EEEEECCGGGEEEEEEETTT
T ss_pred EEecCC-HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCceeEEeCCCCc-eEeeeecCCcEEEEEEecch
Confidence 677777 5899999999999999999999999999999999999999999999999994 7888886 799999999999
Q ss_pred hHHHHHHHHhccCceeeeEEEEecCCCC-ceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEE
Q 023344 154 ESMENALRACCKGIKIGKILIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLN 232 (283)
Q Consensus 154 ~~m~~~l~~~~p~a~~G~i~i~R~~~t~-~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~ 232 (283)
++|++++.+++|++++|||+++||+.|+ +++||.++| +++|++|+|+|||+|||+|+.+|++.|+++|+ ++|.++|
T Consensus 80 ~~~~~~l~~~lp~~~vg~i~~~rd~~t~~~~~~~~~lp-di~~r~vilvDd~laTG~T~~~ai~~L~~~G~--~~I~~~~ 156 (208)
T 2e55_A 80 LSFLEGALQVVPNAKVGFLGIKRNEETLESHIYYSRLP-ELKGKIVVILDPMLATGGTLEVALREILKHSP--LKVKSVH 156 (208)
T ss_dssp HHHHHHHHHHSTTCEECEEEEEECTTTCCEEEEEEECC-CCBTSEEEEECSEESSSHHHHHHHHHHHTTCB--SEEEEEE
T ss_pred HHHHHHHHHhCCCCcEEEEEEEEecCCCceEEEecCCC-CCCCCEEEEECCccccHHHHHHHHHHHHHcCC--CEEEEEE
Confidence 9999999999999999999999999888 788999999 99999999999999999999999999999997 8999999
Q ss_pred EeeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCchhhhccCCCC
Q 023344 233 LISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD 283 (283)
Q Consensus 233 ~vas~~gl~~l~~~~P~v~I~ta~iD~~ln~~~~ivPGlGd~GdR~fgt~~ 283 (283)
++++++|++++.++||++.|||++||++||+++||+||+||||||+|||++
T Consensus 157 lv~~~~g~~~l~~~~p~v~I~t~~iD~~l~e~~~I~PglgdagdR~fgt~~ 207 (208)
T 2e55_A 157 AIAAPEGLKRIEEKFKEVEIFVGNVDERLNDKGYIIPGLGDIGDRLYAVSV 207 (208)
T ss_dssp EEECHHHHHHHHHHCTTSEEEEEEECSEECTTSCEESSCSSHHHHHHSCCC
T ss_pred EEECHHHHHHHHHHCCCcEEEEEeecCCCCCCceeccCccHHHHHhcCCCC
Confidence 999999999999999999999999999999999999999999999999974
No 8
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=100.00 E-value=1e-57 Score=402.85 Aligned_cols=207 Identities=34% Similarity=0.522 Sum_probs=198.0
Q ss_pred CCceeeecCchHHHHHhHhhhcCCCChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeeec-cceeEEEec
Q 023344 72 YPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFC-KKLCGVSIV 150 (283)
Q Consensus 72 ~~~v~vl~~~~~l~~llt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~~-~~i~~V~Il 150 (283)
+.|+|+++| |+++|++|+|||++|++.+||++++||++||+|||++++|+++.+|+||++. +.|..++ +++|+||||
T Consensus 1 ~~~v~~~~~-p~~~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~~ea~~~l~~~~~~V~tPl~~-~~~~~~~~~~~~vV~Il 78 (209)
T 1i5e_A 1 MGKVYVFDH-PLIQHKLTYIRDKNTGTKEFRELVDEVATLMAFEITRDLPLEEVEIETPVSK-ARAKVIAGKKLGVIPIL 78 (209)
T ss_dssp -CCEEECCC-HHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHGGGCCEEEEEEECSSCE-EEEEEECCCCEEEEEBT
T ss_pred CCCeEEcCC-HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcceEEecCCce-eeeeEecCCceEEEEEe
Confidence 357999988 5899999999999999999999999999999999999999999999999995 6788887 799999999
Q ss_pred ccchHHHHHHHHhccCceeeeEEEEecCCCC-ceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEE
Q 023344 151 RSGESMENALRACCKGIKIGKILIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHII 229 (283)
Q Consensus 151 RaG~~m~~~l~~~~p~a~~G~i~i~R~~~t~-~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~ 229 (283)
|+|++|.+++.+.+|++++|+++.+|++.++ +..||.++|.++++++|+|+|||++||+|+.+|++.|+++|+ ++|.
T Consensus 79 r~G~~~~~~L~~~l~~~~~~~i~~~r~~~t~~~~~~~~~lp~~i~~~~VllvDd~l~TG~T~~~a~~~L~~~G~--~~I~ 156 (209)
T 1i5e_A 79 RAGIGMVDGILKLIPAAKVGHIGLYRDPQTLKPVEYYVKLPSDVEERDFIIVDPMLATGGSAVAAIDALKKRGA--KSIK 156 (209)
T ss_dssp TGGGGGHHHHHHHCTTSEECEEEEECCTTCSSCEEEEEECCTTTTTSEEEEECSEESSSHHHHHHHHHHHHTTC--CCEE
T ss_pred cCChHHHHHHHHhCCCCeEEEEEEEEcCCCCceEEEEEcCCCccCCCEEEEEcCCCcCHHHHHHHHHHHHHcCC--CEEE
Confidence 9999999999999999999999999998887 678899999999999999999999999999999999999998 7999
Q ss_pred EEEEeeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCchhhhccCCC
Q 023344 230 FLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 282 (283)
Q Consensus 230 ~v~~vas~~gl~~l~~~~P~v~I~ta~iD~~ln~~~~ivPGlGd~GdR~fgt~ 282 (283)
++|++++++|++++.++||++.|||++||++||+++||+||+||||||||||+
T Consensus 157 ~~~lv~~~~g~~~l~~~~p~~~I~t~~id~~l~~~~~i~Pglgdagdr~fgt~ 209 (209)
T 1i5e_A 157 FMCLIAAPEGVKAVETAHPDVDIYIAALDERLNDHGYIVPGLGDAGDRLFGTK 209 (209)
T ss_dssp EECSEECHHHHHHHHHHCTTCEEEESEECCEECTTCCEESSCSCHHHHHHSCC
T ss_pred EEEEEECHHHHHHHHHhCcCcEEEEEEeCCCCCCCceEccCCchHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999995
No 9
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=99.26 E-value=8.8e-11 Score=102.60 Aligned_cols=120 Identities=13% Similarity=0.238 Sum_probs=96.7
Q ss_pred CChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhccC-ceeeeEEE
Q 023344 96 ISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCKG-IKIGKILI 174 (283)
Q Consensus 96 T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~p~-a~~G~i~i 174 (283)
-+..+|+..+++|+..+.++. + + ++.++|+++++|.++...+.+.+.- .+++++..
T Consensus 35 ~s~~~i~~~i~~LA~~I~~~~----~---------------~----~~~vVVgi~~GG~~~a~~La~~L~~p~~~~~i~~ 91 (204)
T 3hvu_A 35 ISEEQIQEKVLELGAIIAEDY----K---------------N----TVPLAIGVLKGAMPFMADLLKRTDTYLEMDFMAV 91 (204)
T ss_dssp ECHHHHHHHHHHHHHHHHHHT----S---------------S----SCCEEEEETTTTHHHHHHHHHTCCSCCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHc----C---------------C----CCCEEEEeCcchHHHHHHHHHHhCCCcceEEEEE
Confidence 367789999999888876541 1 1 2468999999999999999999874 56788887
Q ss_pred Eec--C--CCCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHHH
Q 023344 175 HRD--G--DNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGI 240 (283)
Q Consensus 175 ~R~--~--~t~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~gl 240 (283)
.|. + .++.......+|.+++|++|+|+||+++||+|+.++++.|++.|+ +.|.+++++..+++-
T Consensus 92 ~~Y~~~~~~~~~v~i~~~l~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~--~~v~~~~l~~k~~~~ 159 (204)
T 3hvu_A 92 SSYGHSTVSTGEVKILKDLDTSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKA--KSVKIVTLLDKPTGR 159 (204)
T ss_dssp EECSGGGTTSCCEEEEECCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTC--SEEEEEEEEECGGGC
T ss_pred EEecCCCccCCcEEEEcCCCccCCCCEEEEEeceeCchHHHHHHHHHHHHcCC--CEEEEEEEEECCCCC
Confidence 653 2 223333456788889999999999999999999999999999997 789999999998873
No 10
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=99.26 E-value=6.4e-11 Score=101.99 Aligned_cols=119 Identities=14% Similarity=0.249 Sum_probs=95.1
Q ss_pred ChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhccC-ceeeeEEEE
Q 023344 97 SKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCKG-IKIGKILIH 175 (283)
Q Consensus 97 ~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~p~-a~~G~i~i~ 175 (283)
+..+|+..+++|+..+.++ ++ + ++.++|+++++|.+|...+.+.+.- ..++++.+.
T Consensus 14 ~~~~i~~~i~~La~~I~~~----~~---------------~----~~~vvVgi~~gG~~~a~~la~~L~~p~~i~~i~~~ 70 (186)
T 3o7m_A 14 SEEQLQEKVKELALQIERD----FE---------------G----EEIVVIAVLKGSFVFAADLIRHIKNDVTIDFISAS 70 (186)
T ss_dssp CHHHHHHHHHHHHHHHHHH----TT---------------T----SCEEEEEETTTTHHHHHHHHTTCCSCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHH----cC---------------C----CCCEEEEECcchHHHHHHHHHHhCCCCceEEEEEE
Confidence 5677888888888877654 11 1 2468999999999999999999873 568888875
Q ss_pred ecC----CCCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHHH
Q 023344 176 RDG----DNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGI 240 (283)
Q Consensus 176 R~~----~t~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~gl 240 (283)
+.. .++.......++.+++|++|+|+||+++||+|+.++++.|++.|+ +.|.+++++..+++-
T Consensus 71 ~Y~~~~~~~~~v~i~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~--~~v~~~~l~~k~~~~ 137 (186)
T 3o7m_A 71 SYGNQTETTGKVKLLKDIDVNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKP--KALKFCTLLDKPERR 137 (186)
T ss_dssp ECC-------CEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCC--SEEEEEEEEECGGGC
T ss_pred EecCCCcccCcEEEEecCCCCCCcCEEEEEcCeeCCcHHHHHHHHHHHhcCC--cEEEEEEEEECCCCC
Confidence 432 223333456788889999999999999999999999999999997 789999999999873
No 11
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=99.26 E-value=6.9e-11 Score=100.97 Aligned_cols=119 Identities=20% Similarity=0.273 Sum_probs=91.7
Q ss_pred ChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhccC-ceeeeEEEE
Q 023344 97 SKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCKG-IKIGKILIH 175 (283)
Q Consensus 97 ~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~p~-a~~G~i~i~ 175 (283)
+..+|...+++|+..+.+. .+ +. .+.++|+++++|.++...+.+.+.- ..++++.+.
T Consensus 10 s~~~i~~~i~~La~~I~~~----~~---------------~~---~~~vvVgi~~gG~~~a~~la~~L~~~~~~~~i~~~ 67 (177)
T 3ohp_A 10 SEQEVAQRIRELGQQITEH----YQ---------------GS---SDLVLVGLLRGSFVFMADLARQIHLTHQVDFMTAS 67 (177)
T ss_dssp CHHHHHHHHHHHHHHHHHH----TT---------------TC---SCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHH----cC---------------CC---CCeEEEEECcchHHHHHHHHHHcCCCceEEEEEEE
Confidence 4567777888888777654 11 10 1268999999999999999999874 567888764
Q ss_pred --ecCC--CCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHH
Q 023344 176 --RDGD--NGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEG 239 (283)
Q Consensus 176 --R~~~--t~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~g 239 (283)
|++. ++.......++.+++|++|+|+||+++||+|+.++++.|+++|+ +.|.+++++..+++
T Consensus 68 ~y~~~~~~~~~v~i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~--~~v~~~~l~~~~~~ 133 (177)
T 3ohp_A 68 SYGNSMQSSRDVRILKDLDDDIKGKDVLLVEDIIDTGNTLNKVKEILALREP--KSIRICTLLDKPTR 133 (177)
T ss_dssp C--------CCCCEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCC--SEEEEEEEEECGGG
T ss_pred EEcCCCccCCcEEEecCCCcccCCCEEEEEeeEeCcHHHHHHHHHHHHhcCC--cEEEEEEEEECCcc
Confidence 3432 23333456788889999999999999999999999999999998 78999999999876
No 12
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=99.25 E-value=6.9e-11 Score=101.30 Aligned_cols=120 Identities=16% Similarity=0.180 Sum_probs=92.8
Q ss_pred CCChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhcc-CceeeeEE
Q 023344 95 GISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCK-GIKIGKIL 173 (283)
Q Consensus 95 ~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~p-~a~~G~i~ 173 (283)
--+..+++..+++|+..+.++. + + ++.++|+++++|.++...+.+.++ .+.++++.
T Consensus 13 li~~~~i~~~i~~La~~I~~~~----~---------------~----~~~vvVgi~~gg~~~a~~la~~L~~p~~~~~i~ 69 (181)
T 2ywu_A 13 QISAEAIKKRVEELGGEIARDY----Q---------------G----KTPHLICVLNGAFIFMADLVRAIPLPLTMDFIA 69 (181)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHT----T---------------T----CCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHHHHc----C---------------C----CCCEEEEECchhHHHHHHHHHHcCCCceEEEEE
Confidence 3566778888888888776541 1 1 246899999999999999999997 45677777
Q ss_pred EEe--cCC--CCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHH
Q 023344 174 IHR--DGD--NGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEG 239 (283)
Q Consensus 174 i~R--~~~--t~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~g 239 (283)
..+ ++. ++.......++.+++|++|+|+||+++||+|+.++++.|+++|+ ++|.+++++..+++
T Consensus 70 ~~~y~~~~~~~~~v~i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~--~~v~~~~l~~k~~~ 137 (181)
T 2ywu_A 70 ISSYGNAFKSSGEVELLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKP--ASVRVAALLSKPSR 137 (181)
T ss_dssp EC------------CEEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCC--SEEEEEEEEECGGG
T ss_pred EEEecCCccccCcEEEEecCCCCCCCCEEEEECCeeCChHHHHHHHHHHHhcCC--cEEEEEEEEECCCC
Confidence 643 332 22223345677889999999999999999999999999999997 78999999999887
No 13
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.18 E-value=2.6e-10 Score=99.32 Aligned_cols=111 Identities=18% Similarity=0.335 Sum_probs=84.4
Q ss_pred eeEEEecccchHHHHHHHHhccCceeeeEEEEecCC-------------CCceeE-------------------------
Q 023344 144 LCGVSIVRSGESMENALRACCKGIKIGKILIHRDGD-------------NGKQLI------------------------- 185 (283)
Q Consensus 144 i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~-------------t~~~~~------------------------- 185 (283)
.+++++.|+|.++...+.+.+. +++..+.+++... ++....
T Consensus 25 ~vVv~v~rGg~~~A~~la~~l~-~p~~~~~~rk~~~~~~~e~~~ga~s~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 103 (208)
T 1wd5_A 25 PVVLGLPRGGVVVADEVARRLG-GELDVVLVRKVGAPGNPEFALGAVGEGGELVLMPYALRYADQSYLEREAARQRDVLR 103 (208)
T ss_dssp CEEEECTTHHHHHHHHHHHHHT-CEEEECCEEEEEETTEEEEEEEEEETTCCEEECTTHHHHSCHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHhC-CCeEEEEEEEecCCCCchhhcceecCCCcEEechhhhcccCHHHHHHHHHHHHHHHH
Confidence 4788999999999999888763 4444333443311 221110
Q ss_pred -----e--ccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHHHHHHHHhCCCcEEEEEeec
Q 023344 186 -----Y--EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEID 258 (283)
Q Consensus 186 -----y--~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~gl~~l~~~~P~v~I~ta~iD 258 (283)
| ...+.+++|++|+|+||+++||+|+.++++.|+++|+ ++|.+++++.++++.+++.... ++++....
T Consensus 104 ~r~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga--~~V~v~~~v~~~~~~~~l~~~~---~~v~~~~~ 178 (208)
T 1wd5_A 104 KRAERYRRVRPKAARKGRDVVLVDDGVATGASMEAALSVVFQEGP--RRVVVAVPVASPEAVERLKARA---EVVALSVP 178 (208)
T ss_dssp HHHHHHHHHSCCCCCTTSEEEEECSCBSSCHHHHHHHHHHHTTCC--SEEEEEEEEBCHHHHHHHHTTS---EEEEEECC
T ss_pred HHHHHhhccCCCCCCCCCEEEEECCCccHHHHHHHHHHHHHHcCC--CEEEEEEEEcCHHHHHHhcccC---cEEEEecC
Confidence 1 2455678999999999999999999999999999998 7899999999999999987653 88887765
Q ss_pred CC
Q 023344 259 VA 260 (283)
Q Consensus 259 ~~ 260 (283)
+.
T Consensus 179 ~~ 180 (208)
T 1wd5_A 179 QD 180 (208)
T ss_dssp TT
T ss_pred cc
Confidence 54
No 14
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=99.16 E-value=2.4e-10 Score=97.81 Aligned_cols=120 Identities=15% Similarity=0.256 Sum_probs=90.3
Q ss_pred CChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhccC-ceeeeEEE
Q 023344 96 ISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCKG-IKIGKILI 174 (283)
Q Consensus 96 T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~p~-a~~G~i~i 174 (283)
-+..++...+.+|+..+... ++ + +..++|++.++|.++...+.+.+.- ...+.+..
T Consensus 17 ~~~~~i~~~~~~La~~i~~~----~~---------------~----~~~vvv~i~~gG~~~a~~la~~l~~p~~~~~i~~ 73 (185)
T 2geb_A 17 ITEEQLKAKVKELGEMITRD----YE---------------G----KDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAV 73 (185)
T ss_dssp ECHHHHHHHHHHHHHHHHHH----TT---------------T----SCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEE
T ss_pred eCHHHHHHHHHHHHHHHHHH----cC---------------C----CCCEEEEECcCcHHHHHHHHHHcCCCceeEEEEE
Confidence 44556777777776666532 11 0 2467999999999999999999863 35566655
Q ss_pred EecCC----CCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHHH
Q 023344 175 HRDGD----NGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGI 240 (283)
Q Consensus 175 ~R~~~----t~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~gl 240 (283)
.+... ++.......++.+++|++|+|+||+++||+|+.++++.|+++|+ ++|.+++++..+++.
T Consensus 74 ~~y~~~~~~~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga--~~V~~~~l~~~~~~~ 141 (185)
T 2geb_A 74 SSYGSSTKSSGIVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKP--RSLKICTILDKPERR 141 (185)
T ss_dssp EECSTTHHHHCCEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCC--SEEEEEEEEECGGGC
T ss_pred EecCCCCccCccEEEeccCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCC--CEEEEEEEEECCCcc
Confidence 44321 12222345677789999999999999999999999999999998 789999999999884
No 15
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=99.14 E-value=2.4e-10 Score=102.77 Aligned_cols=120 Identities=10% Similarity=0.106 Sum_probs=95.8
Q ss_pred CChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhcc----------
Q 023344 96 ISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCK---------- 165 (283)
Q Consensus 96 T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~p---------- 165 (283)
-+..+|+..+++|+..+.++.- + ++.++|+|+++|..|...+.+.+.
T Consensus 64 i~~~~I~~~i~~LA~~I~~~~~-------------------~----~~~vVVgIl~gG~~fa~~La~~L~~~~v~~~rk~ 120 (250)
T 3ozf_A 64 VPNGVIKNRIEKLAYDIKKVYN-------------------N----EEFHILCLLKGSRGFFTALLKHLSRIHNYSAVET 120 (250)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHT-------------------T----CCEEEEEEETTTHHHHHHHHHHHHHHHHHHCCTT
T ss_pred ECHHHHHHHHHHHHHHHHHHcC-------------------C----CCCEEEEECcchHHHHHHHHHHhccccccccccc
Confidence 5677899999999888876521 1 246899999999999988887764
Q ss_pred ---CceeeeEEEEe--cCCC-CceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHH
Q 023344 166 ---GIKIGKILIHR--DGDN-GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEG 239 (283)
Q Consensus 166 ---~a~~G~i~i~R--~~~t-~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~g 239 (283)
..+++++.+++ ++.+ +.......++.+++|++|+|+||+++||+|+.++++.|+++|+ +.|.+++++..+++
T Consensus 121 gklP~~v~fI~~ssY~~~~s~g~v~i~~~~~~~~~gk~VlIVDDii~TG~Tl~~~~~~L~~~g~--~~v~va~l~~k~~~ 198 (250)
T 3ozf_A 121 SKPLFGEHYVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEI--KTVAIACLFIKRTP 198 (250)
T ss_dssp CCCCEEEEEEEEEEEETTEEEEEEEEECCCGGGGTTCEEEEEEEEESSSHHHHHHHHHHGGGCC--SEEEEEEEEEECCT
T ss_pred cCCCceEEEEEEEEecCCcccCcEEEEcCCccccCCCEEEEEeceeCchHHHHHHHHHHHhcCC--CEEEEEEEEECCcc
Confidence 45688887754 3322 2333346777788999999999999999999999999999998 78999999998877
Q ss_pred H
Q 023344 240 I 240 (283)
Q Consensus 240 l 240 (283)
.
T Consensus 199 r 199 (250)
T 3ozf_A 199 L 199 (250)
T ss_dssp T
T ss_pred c
Confidence 3
No 16
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=99.12 E-value=2e-10 Score=100.95 Aligned_cols=130 Identities=13% Similarity=0.174 Sum_probs=89.5
Q ss_pred cCCCChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhcc-------
Q 023344 93 DRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCK------- 165 (283)
Q Consensus 93 d~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~p------- 165 (283)
..-.+..+|+...++|+..|..+. . .+..++|++.|+|.++...+.+.+.
T Consensus 33 ~il~~~~~~~~~~~~La~~i~~~~-------------------~----~~~~vVvgi~~GG~~~a~~la~~L~~~~~i~~ 89 (217)
T 1z7g_A 33 RVFIPHGLIMDRTERLARDVMKEM-------------------G----GHHIVALCVLKGGYKFFADLLDYIKALNRNSD 89 (217)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHH-------------------T----TSCEEEEEECSSCCHHHHHHHHHHHHHHTTCS
T ss_pred eEEECHHHHHHHHHHHHHHHHHHc-------------------C----CCCCEEEEECCCCHHHHHHHHHHhCCccccCC
Confidence 344678889999999888886431 0 1246899999999999988887765
Q ss_pred ---CceeeeEEE--EecCC-CCceeEe-ccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHH
Q 023344 166 ---GIKIGKILI--HRDGD-NGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPE 238 (283)
Q Consensus 166 ---~a~~G~i~i--~R~~~-t~~~~~y-~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~ 238 (283)
....+++.+ ++++. ++...+. ...+.+++|++|+|+||+++||+|+.++++.|+++|+ ++|.+++++..++
T Consensus 90 g~~~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~L~~~g~--~~v~~~~l~~k~~ 167 (217)
T 1z7g_A 90 RSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNP--KMVKVASLLVKRT 167 (217)
T ss_dssp SCCCEEEEEECBC----------CCBCCSSCGGGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCC--SEEEEEEEEEECC
T ss_pred CceEeeeeeEEEEEecccccccceEEecCCCccccCCCEEEEEeceeCcHHHHHHHHHHHHhcCC--CEEEEEEEEECcc
Confidence 334555543 23322 2221121 1234578999999999999999999999999999998 7899999999888
Q ss_pred HHHHHHHhCCC
Q 023344 239 GIHCVCKRFPS 249 (283)
Q Consensus 239 gl~~l~~~~P~ 249 (283)
+ +.....|+
T Consensus 168 ~--~~~~~~~d 176 (217)
T 1z7g_A 168 P--RSVGYKPD 176 (217)
T ss_dssp -------CCCS
T ss_pred c--ccCCCCCc
Confidence 6 55555665
No 17
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=99.06 E-value=8.4e-10 Score=95.88 Aligned_cols=110 Identities=14% Similarity=0.203 Sum_probs=82.5
Q ss_pred ceeEEEecccchHHHHHHHHhccC-ceeeeEEEEecCC----CCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHH
Q 023344 143 KLCGVSIVRSGESMENALRACCKG-IKIGKILIHRDGD----NGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQL 217 (283)
Q Consensus 143 ~i~~V~IlRaG~~m~~~l~~~~p~-a~~G~i~i~R~~~----t~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~ 217 (283)
..++|++.++|.++...+.+.+.- ...+.+...+... ++.......++.+++|++|+|+||+++||+|+.+|++.
T Consensus 61 ~~viv~v~~gG~~~a~~la~~l~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~ 140 (205)
T 1yfz_A 61 DLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYGSSTKSSGIVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRET 140 (205)
T ss_dssp CEEEEEETTTHHHHHHHHHHTCCSCCEEEEEEEEECSHHHHHHCCEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHH
T ss_pred CCEEEEECcCCHHHHHHHHHHhCCCceeEEEEEEeccCCccccceEEEeccCCCCCCcCEEEEECCccCcHHHHHHHHHH
Confidence 457999999999999999999863 3456665444321 22222345667789999999999999999999999999
Q ss_pred HHHcCCCCccEEEEEEeeCHHHHHHHHHhCCCcEEEEEeec
Q 023344 218 LIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEID 258 (283)
Q Consensus 218 L~~~G~~e~~I~~v~~vas~~gl~~l~~~~P~v~I~ta~iD 258 (283)
|+++|+ ++|.+++++..+++.+ + ...| ..++-.++
T Consensus 141 L~~~Ga--~~V~~~~l~~~~~~~~-~-~~~~--d~~g~~~p 175 (205)
T 1yfz_A 141 LLGRKP--RSLKICTILDKPERRE-A-DVKV--DYCGFKIP 175 (205)
T ss_dssp HHTTCC--SEEEEEEEEECGGGCC-S-CCCC--SEEEEECC
T ss_pred HHhcCC--CEEEEEEEEecCcccc-C-CCCC--CEEEEEcC
Confidence 999998 7899999999998842 2 2335 34554554
No 18
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=99.05 E-value=8.5e-10 Score=97.32 Aligned_cols=124 Identities=13% Similarity=0.205 Sum_probs=89.0
Q ss_pred ChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeeeccc-eeEEEecccchHHHHHHHHhc---c-Cceeee
Q 023344 97 SKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKK-LCGVSIVRSGESMENALRACC---K-GIKIGK 171 (283)
Q Consensus 97 ~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~~~~-i~~V~IlRaG~~m~~~l~~~~---p-~a~~G~ 171 (283)
+..++....++|+..+..+.-.. + + . ..++ .++|+++++|.++...+.+.+ . ....+.
T Consensus 13 ~~~~i~~~~~~La~~I~~~~~~~-~--------~--~------~~~p~~vVv~v~~gG~~~a~~La~~L~~~~~p~~~~~ 75 (220)
T 1tc1_A 13 TEEEIRTRIKEVAKRIADDYKGK-G--------L--R------PYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEF 75 (220)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTS-C--------C--B------TTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHccCc-c--------c--c------cCCCCeEEEEeccCCHHHHHHHHHHHHhcCCCccccE
Confidence 45667777888887776432110 0 0 0 0123 689999999999999988887 4 234666
Q ss_pred EEEEecC----CCCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHH
Q 023344 172 ILIHRDG----DNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEG 239 (283)
Q Consensus 172 i~i~R~~----~t~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~g 239 (283)
+...+.. .++.......++.+++|++|+|+||+++||+|+.++++.|+++|+ ++|.+++++..+++
T Consensus 76 l~~~~y~~~~~~~~~v~~~~~~~~~v~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga--~~V~v~~l~~k~~~ 145 (220)
T 1tc1_A 76 ICVSSYGEGLTSSGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRP--ASLKTVVLLDKREG 145 (220)
T ss_dssp EEEECC---------CEEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCC--SEEEEEEEEECTTC
T ss_pred EEEeecCCCcccCCcEEEecCCCccCCCCEEEEEeCccCcHHHHHHHHHHHHhcCC--CEEEEEEEEECCcc
Confidence 6654432 122222235677789999999999999999999999999999998 78999999998887
No 19
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=99.04 E-value=7.5e-10 Score=94.42 Aligned_cols=135 Identities=15% Similarity=0.113 Sum_probs=93.3
Q ss_pred CChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhccC-ceeeeEEE
Q 023344 96 ISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCKG-IKIGKILI 174 (283)
Q Consensus 96 T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~p~-a~~G~i~i 174 (283)
.+..++.....+|+..+..+. + + +..++|++.++|.++...+.+.+.- ..++.+.+
T Consensus 15 ~~~~~i~~~~~~la~~i~~~~----~---------------~----~~~vvv~i~~gg~~~a~~la~~l~~p~~~~~~~~ 71 (183)
T 1hgx_A 15 YNQDDIQKRIRELAAELTEFY----E---------------D----KNPVMICVLTGAVFFYTDLLKHLDFQLEPDYIIC 71 (183)
T ss_dssp ECHHHHHHHHHHHHHHHHHHH----T---------------T----TCCEEEEETTTTHHHHHHHHTTCCSCCEEEEEEE
T ss_pred cCHHHHHHHHHHHHHHHHHHc----C---------------C----CCcEEEEeCcChHHHHHHHHHHcCCCcceeEEEE
Confidence 455667777777776664321 0 0 2457999999999999999998863 34555555
Q ss_pred Eec--CC-CCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHHHHHHHHhCCCcE
Q 023344 175 HRD--GD-NGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLK 251 (283)
Q Consensus 175 ~R~--~~-t~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~gl~~l~~~~P~v~ 251 (283)
.+. +. ++.......++.+++|++|+|+||+++||+|+.++++.|+++|+ ++|.+++++..++|.+++. ..| .
T Consensus 72 ~~y~~~~~~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga--~~v~~~~l~~~~~g~~~~~-~~~--d 146 (183)
T 1hgx_A 72 SSYSGTKSTGNLTISKDLKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKP--ASLKVCTLCDKDIGKKAYD-VPI--D 146 (183)
T ss_dssp EC---------CEEEECCSSCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCC--SEEEEEEEEEECCSSCSSC-CCC--S
T ss_pred EecCCcccccceEEeecCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCC--CEEEEEEEEecCcccccCC-CCC--C
Confidence 322 11 12222334566789999999999999999999999999999998 7899999888887654432 235 4
Q ss_pred EEEEeec
Q 023344 252 IVTSEID 258 (283)
Q Consensus 252 I~ta~iD 258 (283)
.++-.++
T Consensus 147 ~~g~~~p 153 (183)
T 1hgx_A 147 YCGFVVE 153 (183)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 4555554
No 20
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=99.04 E-value=4.1e-10 Score=99.44 Aligned_cols=120 Identities=16% Similarity=0.199 Sum_probs=85.9
Q ss_pred CCChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhcc---------
Q 023344 95 GISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCK--------- 165 (283)
Q Consensus 95 ~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~p--------- 165 (283)
-.+..++.....+|+..+..+. + .++.++|+++|+|.++...+.+.+.
T Consensus 43 l~~~~~i~~~~~~La~~i~~~~----~-------------------~~~~vvv~i~~gG~~~a~~la~~L~~~~~~~~~~ 99 (225)
T 2jbh_A 43 LIPHGIIVDRIERLAKDIMKDI----G-------------------YSDIMVLCVLKGGYKFXADLVEHLKNISRNSDRF 99 (225)
T ss_dssp EECHHHHHHHHHHHHHHHHHHH----T-------------------TSCEEEEEEETTTHHHHHHHHHHHHHHHHHSSCC
T ss_pred EECHHHHHHHHHHHHHHHHHHc----C-------------------CCCCEEEEEcCCCEehhHHHHHHhhhhccccccC
Confidence 3556677777777777665431 1 1246899999999999988887775
Q ss_pred -CceeeeEEEEec--CC-CCc-eeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHH
Q 023344 166 -GIKIGKILIHRD--GD-NGK-QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEG 239 (283)
Q Consensus 166 -~a~~G~i~i~R~--~~-t~~-~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~g 239 (283)
.+.++++...+. +. ++. ++.....+.+++|++|+|+||+++||+|+.++++.|+++|+ ++|.+++++.++++
T Consensus 100 ~p~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~v~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga--~~V~va~l~~k~~~ 176 (225)
T 2jbh_A 100 VSMKVDFIRLKSYRNDQSMGEMQIIGGDDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKP--NMIKVASLLVKRTS 176 (225)
T ss_dssp CCEEEEEEEEC----------CCEESSSCGGGGTTSEEEEEEEEESSSHHHHHHHHHHHTTCC--SEEEEEEEEEECC-
T ss_pred CCceEEEEEEEeccCccccccEEEecCCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCC--CEEEEEEEEECCcc
Confidence 355777765432 22 222 22222344578999999999999999999999999999998 78999999998876
No 21
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=99.03 E-value=1.3e-09 Score=89.90 Aligned_cols=94 Identities=19% Similarity=0.219 Sum_probs=72.9
Q ss_pred eeEEEecccchHHHHHHHHhccCceeeeEEEEecCC--C-Cc-eeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHH
Q 023344 144 LCGVSIVRSGESMENALRACCKGIKIGKILIHRDGD--N-GK-QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLI 219 (283)
Q Consensus 144 i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~--t-~~-~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~ 219 (283)
.++|++.|+|.++...+.+.+.-..++.+...+... + .. ..+....+.+++|++|+|+||+++||+|+.++++.|+
T Consensus 28 d~iv~v~~gg~~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~ 107 (153)
T 1vdm_A 28 DVIIGVARGGLIPAVRLSHILGDIPLKVIDVKFYKGIDERGEKPVITIPIHGDLKDKRVVIVDDVSDTGKTLEVVIEEVK 107 (153)
T ss_dssp SEEEEETTTTHHHHHHHHHHTTSCCEEEEEEECCCC--CCCSSCEEEECCCSCCBTCEEEEEEEEESSCHHHHHHHHHHH
T ss_pred CEEEEECCcCHHHHHHHHHHhCCCceEEEEEEEecCCcccccceeEeccCCcCCCCCEEEEEecccCChHHHHHHHHHHH
Confidence 368899999999999999988754455444332211 1 11 2234556667899999999999999999999999999
Q ss_pred HcCCCCccEEEEEEeeCHHH
Q 023344 220 EKGVPESHIIFLNLISAPEG 239 (283)
Q Consensus 220 ~~G~~e~~I~~v~~vas~~g 239 (283)
++|+ +.|.++++...+++
T Consensus 108 ~~ga--~~v~~~~l~~~~~~ 125 (153)
T 1vdm_A 108 KLGA--KEIKIACLAMKPWT 125 (153)
T ss_dssp TTTB--SEEEEEEEEECTTC
T ss_pred HcCC--CEEEEEEEEeCCCC
Confidence 9998 78989999888876
No 22
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=99.03 E-value=4e-10 Score=104.59 Aligned_cols=112 Identities=18% Similarity=0.180 Sum_probs=84.5
Q ss_pred cceeEEEecccchHHHHHHHHhccCceeeeEEEEecCCCCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHc
Q 023344 142 KKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEK 221 (283)
Q Consensus 142 ~~i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~ 221 (283)
++.++|++.++|..+..++.+.+. +++..+.-.|...+.. ....++.+++|++|+|+|||++||+|+.+|++.|+++
T Consensus 167 ~~~vVv~pd~Gg~~~A~~la~~L~-~p~~~l~k~r~~~~~~--~~~~l~~~v~gk~VlLVDDiitTG~Tl~~aa~~Lk~~ 243 (317)
T 1dku_A 167 EDIVIVSPDHGGVTRARKLADRLK-APIAIIDKRRPRPNVA--EVMNIVGNIEGKTAILIDDIIDTAGTITLAANALVEN 243 (317)
T ss_dssp CSEEEEESSGGGHHHHHHHHHHTT-CCEEEEECC-----------CEEESCCTTCEEEEECSEESSCHHHHHHHHHHHHT
T ss_pred CCcEEEEeCcchHHHHHHHHHHhC-CCEEEEEEEeccccce--eEEEecccCCCCEEEEEecccCCCHHHHHHHHHHHHc
Confidence 478999999999999999999885 4555332222211111 1234456899999999999999999999999999999
Q ss_pred CCCCccEEEEE--EeeCHHHHHHHHHhCCCcEEEEEeec
Q 023344 222 GVPESHIIFLN--LISAPEGIHCVCKRFPSLKIVTSEID 258 (283)
Q Consensus 222 G~~e~~I~~v~--~vas~~gl~~l~~~~P~v~I~ta~iD 258 (283)
|+ ++|.+++ .+.+..+++++.+...+.-++|..+.
T Consensus 244 Ga--~~V~~~~tH~v~~~~a~~~l~~~~i~~vv~t~tip 280 (317)
T 1dku_A 244 GA--KEVYACCTHPVLSGPAVERINNSTIKELVVTNSIK 280 (317)
T ss_dssp TC--SEEEEECSEECCCTTHHHHHHTSSEEEEEEETTSC
T ss_pred CC--cEEEEEEECcccChHHHHHHhhCCCCEEEEeCCcC
Confidence 99 6888888 45566799999877777778887774
No 23
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=99.00 E-value=1e-09 Score=96.07 Aligned_cols=140 Identities=11% Similarity=0.198 Sum_probs=95.4
Q ss_pred CChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhc---c-Cceeee
Q 023344 96 ISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACC---K-GIKIGK 171 (283)
Q Consensus 96 T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~---p-~a~~G~ 171 (283)
.+..+|.....+|+..+....-... + ++ .++.++|++.++|.++...+.+.+ . ....+.
T Consensus 28 ~~~~~i~~~~~~La~~i~~~~~~~~---------~-----~~---~~~~vvvgi~~gG~~~a~~la~~L~~~~~p~~~~~ 90 (211)
T 1pzm_A 28 VTQEQVWAATAKCAKKIAADYKDFH---------L-----TA---DNPLYLLCVLKGSFIFTADLARFLADEGVPVKVEF 90 (211)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHGGGT---------C-----BT---TBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eCHHHHHHHHHHHHHHHHHhccccc---------c-----cC---CCCCEEEEEccchHHHHHHHHHHHhhcCCCceeee
Confidence 5677888888888887765421111 0 00 124689999999999999998888 4 234555
Q ss_pred EEEE--ecC--CCCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHHHHHHHHhC
Q 023344 172 ILIH--RDG--DNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRF 247 (283)
Q Consensus 172 i~i~--R~~--~t~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~gl~~l~~~~ 247 (283)
+... ++. .++.......++.+++|++|+|+||+++||+|+.++++.|+++|+ ++|.+++++..+++ .++ ...
T Consensus 91 i~~~~y~~~~~~~~~~~~~~~~~~~v~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga--~~V~v~~l~~k~~~-~~~-~~~ 166 (211)
T 1pzm_A 91 ICASSYGSGVETSGQVRMLLDVRDSVENRHIMLVEDIVDSAITLQYLMRFMLAKKP--ASLKTVVLLDKPSG-RKV-DVL 166 (211)
T ss_dssp EBCC-------------CCBCCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCC--SEEEEEEEEECGGG-CSS-CCC
T ss_pred EEeeeccCccccCCceEEeccCCCCCCCCEEEEECCccccHHHHHHHHHHHHhcCC--CEEEEEEEEecCcc-CcC-CCC
Confidence 5532 221 122111234567788999999999999999999999999999998 78999999999987 222 234
Q ss_pred CCcEEEEEeec
Q 023344 248 PSLKIVTSEID 258 (283)
Q Consensus 248 P~v~I~ta~iD 258 (283)
| ..++-.+.
T Consensus 167 ~--d~~g~~ip 175 (211)
T 1pzm_A 167 V--DYPVITIP 175 (211)
T ss_dssp C--SEEEEECC
T ss_pred C--CEEEEECC
Confidence 5 34454443
No 24
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=98.96 E-value=1.6e-09 Score=96.19 Aligned_cols=119 Identities=12% Similarity=0.095 Sum_probs=88.2
Q ss_pred CChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhccC---------
Q 023344 96 ISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCKG--------- 166 (283)
Q Consensus 96 T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~p~--------- 166 (283)
.+..++....++|+..+..+. + .+..++|+++++|.++...+.+.+..
T Consensus 50 ~~~~~i~~~~~~La~~i~~~~----~-------------------~~~~vVvgi~~gG~~~a~~la~~L~~~~~~~~~k~ 106 (233)
T 1fsg_A 50 LPGGLVKDRVEKLAYDIHRTY----F-------------------GEELHIICILKGSRGFFNLLIDYLATIQKYSGRES 106 (233)
T ss_dssp ECHHHHHHHHHHHHHHHHHHH----T-------------------TSCEEEEEEETTTHHHHHHHHHHHHHHHHHCSSCC
T ss_pred eCHHHHHHHHHHHHHHHHHHc----C-------------------CCCCEEEEEccCCHHHHHHHHHHhCCccccccccc
Confidence 556677778888887776531 1 02467999999999998888776642
Q ss_pred ----ceeeeEEEEecCCC---CceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHH
Q 023344 167 ----IKIGKILIHRDGDN---GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEG 239 (283)
Q Consensus 167 ----a~~G~i~i~R~~~t---~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~g 239 (283)
..++++...+...+ +...+....+.+++|++|+|+||+++||+|+.++++.|+++|+ ++|.+++++..+++
T Consensus 107 ~~~P~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga--~~V~vavl~~k~~~ 184 (233)
T 1fsg_A 107 SVPPFFEHYVRLKSYQNDNSTGQLTVLSDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGP--KSMRIATLVEKRTD 184 (233)
T ss_dssp SSCSCEEEEEEEEEEETTEEEEEEEEECSCGGGGTTCEEEEEEEEESSSHHHHHHHHHHHTTCC--SEEEEEEEEEECCT
T ss_pred CCCCcEEEEEEEEeccCccccccEEEecCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCC--CEEEEEEEEECCcc
Confidence 44777776443221 2222223345678999999999999999999999999999998 78999999988877
No 25
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=98.93 E-value=4.4e-09 Score=91.33 Aligned_cols=125 Identities=22% Similarity=0.283 Sum_probs=86.7
Q ss_pred CChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhcc-----Cceee
Q 023344 96 ISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCK-----GIKIG 170 (283)
Q Consensus 96 T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~p-----~a~~G 170 (283)
-+..+|...+++|+..+.+..-...|- +. + .++.++|++.++|..+...+.+.+. ..+.+
T Consensus 17 ~~~~~i~~~i~~La~~i~~~~~~~~~~---------~~---~---~~~~vvvgi~~gG~~~a~~La~~L~~~~g~p~~~~ 81 (201)
T 1w30_A 17 MSAANVGRTISRIAHQIIEKTALDDPV---------GP---D---APRVVLLGIPTRGVTLANRLAGNITEYSGIHVGHG 81 (201)
T ss_dssp ECHHHHHHHHHHHHHHHHHHTTTTSCC---------BT---T---BCCEEEEECTTHHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred eCHHHHHHHHHHHHHHHHHHccccccc---------cc---c---CCCcEEEEEcccHHHHHHHHHHHHhHHHCCCcccc
Confidence 346678888888888777653211111 10 0 1357899999999999999888774 23455
Q ss_pred eEEE--EecCCCC---ceeEeccCCC-CCCCcEEEEEcCcccchHHHHHHHHHHHHcC-CCCccEEEEEEeeCH
Q 023344 171 KILI--HRDGDNG---KQLIYEKLPN-DISERHVLLLDPVLATGNSANQAIQLLIEKG-VPESHIIFLNLISAP 237 (283)
Q Consensus 171 ~i~i--~R~~~t~---~~~~y~~lP~-~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G-~~e~~I~~v~~vas~ 237 (283)
.+.. +|++.+. ....+..+|. +++|++|+|+||+++||+|+.+|++.|+++| + +.|.+++++..+
T Consensus 82 ~l~~~~y~~~~~~~~~~~~~~~~~~~~~~~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a--~~V~vavlv~k~ 153 (201)
T 1w30_A 82 ALDITLYRDDLMIKPPRPLASTSIPAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRP--RAVQLAVLVDRG 153 (201)
T ss_dssp ECCCGGGCC--------CCCCCBCCTTCSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCC--SEEEEEEEEECC
T ss_pred eEEEEEecCCccccccceeecccCCCccCCCCEEEEECCccchHHHHHHHHHHHHhCCCC--cEEEEEEEEecC
Confidence 5443 2332221 1233456664 4899999999999999999999999999999 7 688888888764
No 26
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=98.90 E-value=5.4e-09 Score=95.51 Aligned_cols=100 Identities=15% Similarity=0.180 Sum_probs=75.3
Q ss_pred cceeEEEecccchHHHHHHHHhccCceeeeEEEEecCCCCceeEeccCCC-CCCCcEEEEEcCcccchHHHHHHHHHHHH
Q 023344 142 KKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPN-DISERHVLLLDPVLATGNSANQAIQLLIE 220 (283)
Q Consensus 142 ~~i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t~~~~~y~~lP~-~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~ 220 (283)
++.++|++.++|..+...+.+.+ +++...+.-+|...+ ....+++. +++|++|+|+||+++||+|+.+|++.|++
T Consensus 155 ~~~vVv~pd~Gg~~~a~~la~~l-~~p~~~i~k~r~~~~---~~~~~l~g~~v~Gk~VlIVDDii~TG~Tl~~aa~~Lk~ 230 (284)
T 1u9y_A 155 NDPIVLAPDKGALEFAKTASKIL-NAEYDYLEKTRLSPT---EIQIAPKTLDAKDRDVFIVDDIISTGGTMATAVKLLKE 230 (284)
T ss_dssp SSCEEEESSGGGHHHHHHHHHHH-TCCEEEBC-------------CCBSSCCCTTCCEEEEEEECSSSHHHHHHHHHHHH
T ss_pred CCcEEEEEcCChHHHHHHHHHHh-CCCEEEEEEEEcCCC---eEEEEecCccCCCCEEEEEecccCchHHHHHHHHHHHH
Confidence 35689999999999999988776 344443322232211 12344554 79999999999999999999999999999
Q ss_pred cCCCCccEEEEEE--eeCHHHHHHHHHhC
Q 023344 221 KGVPESHIIFLNL--ISAPEGIHCVCKRF 247 (283)
Q Consensus 221 ~G~~e~~I~~v~~--vas~~gl~~l~~~~ 247 (283)
+|+ ++|.+++. +.+.+|.+++.+..
T Consensus 231 ~Ga--~~V~~~~~h~v~s~~a~~~l~~~~ 257 (284)
T 1u9y_A 231 QGA--KKIIAACVHPVLIGDALNKLYSAG 257 (284)
T ss_dssp TTC--CSEEEEEEECCCCTTHHHHHHHHT
T ss_pred CCC--cEEEEEEEeEecCcHHHHHHHhCC
Confidence 998 68888886 77899999998863
No 27
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=98.89 E-value=1.4e-09 Score=94.81 Aligned_cols=118 Identities=9% Similarity=0.127 Sum_probs=84.9
Q ss_pred eEEEecccchHHHHHHHHhccCceeeeEEEEecCCC-CceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCC
Q 023344 145 CGVSIVRSGESMENALRACCKGIKIGKILIHRDGDN-GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGV 223 (283)
Q Consensus 145 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t-~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~ 223 (283)
++|++..+|.++...+.+.+. .+. ..+++.... +..-... ...++|++|+|+||+++||+|+.++++.|+++|+
T Consensus 71 ~vv~v~~~g~~~a~~la~~l~-~p~--~~~rk~~~~~g~~~~i~--g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga 145 (211)
T 2aee_A 71 VIAGTATAGIPHGAIIADKMT-LPF--AYIRSKPKDHGAGNQIE--GRVLKGQKMVIIEDLISTGGSVLDAAAAASREGA 145 (211)
T ss_dssp EEEEETTTTHHHHHHHHHHHT-CCE--EEECSSCC----CCSEE--SCCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTC
T ss_pred EEEEeccCcHHHHHHHHHHhC-CCE--EEEEeecCCcCCcceec--CCCCCcCEEEEEeecccchHHHHHHHHHHHHCCC
Confidence 678888899999888877653 332 233322211 1111111 1347899999999999999999999999999998
Q ss_pred CCccEEEEEEee--CHHHHHHHHHh-CCCcEEEEE-eecCCCCCCCeeec
Q 023344 224 PESHIIFLNLIS--APEGIHCVCKR-FPSLKIVTS-EIDVALNEEFRVIP 269 (283)
Q Consensus 224 ~e~~I~~v~~va--s~~gl~~l~~~-~P~v~I~ta-~iD~~ln~~~~ivP 269 (283)
+.|.+++++. +++|.+++.+. +|.+.+++. .+++.+++.+||.+
T Consensus 146 --~~v~v~~l~~~~~~~~~~~l~~~~~~~~~l~~~~~i~~~l~~~~~i~~ 193 (211)
T 2aee_A 146 --DVLGVVAIFTYELPKASQNFKEAGIKLITLSNYTELIAVAKLQGYITN 193 (211)
T ss_dssp --EEEEEEEEEECCCHHHHHHHHHHTCCEEESCCHHHHHHHHHHHTSSCH
T ss_pred --cEEEEEEEEecccccHHHHHHhCCCCEEEEeeHHHHHHHHHHcCCCCH
Confidence 6777777776 67999999765 776777666 67888888888754
No 28
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=98.87 E-value=4.5e-09 Score=89.12 Aligned_cols=93 Identities=24% Similarity=0.315 Sum_probs=70.0
Q ss_pred ceeEEEecccchHHHHHHHHhcc-----CceeeeEEEEec--CCC----C--ceeEeccCCCCCCCcEEEEEcCcccchH
Q 023344 143 KLCGVSIVRSGESMENALRACCK-----GIKIGKILIHRD--GDN----G--KQLIYEKLPNDISERHVLLLDPVLATGN 209 (283)
Q Consensus 143 ~i~~V~IlRaG~~m~~~l~~~~p-----~a~~G~i~i~R~--~~t----~--~~~~y~~lP~~i~~~~Vil~Dp~iaTG~ 209 (283)
..++|++.++|..+...+.+.+. .+.++++...+. +.+ . .......++.+++|++|+|+||+++||+
T Consensus 33 ~~~iv~i~~~G~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VllVDDvitTG~ 112 (181)
T 1a3c_A 33 NCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLSKKTSNDEPLVKGADIPVDITDQKVILVDDVLYTGR 112 (181)
T ss_dssp -CEEEEESHHHHHHHHHHHHHHHHHHSSCCEEEEEEEECCC--------CCCCEEEEEECSSCCTTSEEEEEEEEESSSH
T ss_pred CeEEEEEcCCCHHHHHHHHHHHhHHhCCCcccCeEEEEEecCcccccCccceeeecccccCcCCCCCEEEEEeCccCcHH
Confidence 35799999999999988887765 245666655332 211 1 2223345677889999999999999999
Q ss_pred HHHHHHHHHHHcC-CCCccEEEEEEeeCH
Q 023344 210 SANQAIQLLIEKG-VPESHIIFLNLISAP 237 (283)
Q Consensus 210 t~~~ai~~L~~~G-~~e~~I~~v~~vas~ 237 (283)
|+.++++.|+++| + +.|.+++++..+
T Consensus 113 Tl~~a~~~L~~~G~a--~~V~~~~l~~k~ 139 (181)
T 1a3c_A 113 TVRAGMDALVDVGRP--SSIQLAVLVDRG 139 (181)
T ss_dssp HHHHHHHHHHHHCCC--SEEEEEEEEECC
T ss_pred HHHHHHHHHHhcCCC--cEEEEEEEEccC
Confidence 9999999999997 8 688888888765
No 29
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=98.87 E-value=7.6e-09 Score=87.88 Aligned_cols=114 Identities=24% Similarity=0.334 Sum_probs=77.0
Q ss_pred ceeEEEecccchHHHHHHHHhcc-----CceeeeEEEE--ecCCC--C--ceeEeccCCCCCCCcEEEEEcCcccchHHH
Q 023344 143 KLCGVSIVRSGESMENALRACCK-----GIKIGKILIH--RDGDN--G--KQLIYEKLPNDISERHVLLLDPVLATGNSA 211 (283)
Q Consensus 143 ~i~~V~IlRaG~~m~~~l~~~~p-----~a~~G~i~i~--R~~~t--~--~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~ 211 (283)
+.++||+.+.|..+...+.+.+. ....+.+... +++.+ + +......++.+++|++|+|+||+++||+|+
T Consensus 33 ~~~iv~v~~rG~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VllVDDvitTG~Tl 112 (181)
T 1ufr_A 33 GLALVGIHTRGIPLAHRIARFIAEFEGKEVPVGVLDITLYRDDLTEIGYRPQVRETRIPFDLTGKAIVLVDDVLYTGRTA 112 (181)
T ss_dssp TEEEEEETTTHHHHHHHHHHHHHHHHCSCCCEEEEEEEC-----------CEEEEEEECSCCTTCEEEEEEEEESSSHHH
T ss_pred CeEEEEECCCChHHHHHHHHHHhHHhCCCcccCeEEEEEecCccccccccceecccccCcCCCCCEEEEEecCCCcHHHH
Confidence 46789999999999988877764 3345555442 22211 1 122234566778999999999999999999
Q ss_pred HHHHHHHHHcC-CCCccEEEEEEeeCHHHHHHHHHhCCCcEEEEEeecCCCCC
Q 023344 212 NQAIQLLIEKG-VPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 263 (283)
Q Consensus 212 ~~ai~~L~~~G-~~e~~I~~v~~vas~~gl~~l~~~~P~v~I~ta~iD~~ln~ 263 (283)
.++++.|+++| + ++|.+++++..+. +-....|+ .+.-.++...++
T Consensus 113 ~~a~~~L~~~G~a--~~V~~~~l~~~~~---~~~~~~~d--~~g~~i~~~~~~ 158 (181)
T 1ufr_A 113 RAALDALIDLGRP--RRIYLAVLVDRGH---RELPIRAD--FVGKNVPTSRSE 158 (181)
T ss_dssp HHHHHHHHHHCCC--SEEEEEEEEECCC---CSSSBCCS--EEEEECCCCTTC
T ss_pred HHHHHHHHhcCCC--cEEEEEEEEcCCC---CcCCccCc--EEEEeCCCCccC
Confidence 99999999999 6 6888888887761 11112344 445555555444
No 30
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=98.86 E-value=7.5e-09 Score=96.30 Aligned_cols=113 Identities=18% Similarity=0.168 Sum_probs=85.2
Q ss_pred cceeEEEecccchHHHHHHHHhccCceeeeEEEEecCCCCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHc
Q 023344 142 KKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEK 221 (283)
Q Consensus 142 ~~i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~ 221 (283)
++.++|+...+|..+...+.+.+. ++...+--+|......+. ..+..+++||+|+|+|||++||+|+.+|++.|+++
T Consensus 163 ~~~vVVspd~Ggv~~A~~lA~~L~-~~~~~i~K~r~~~~~v~~--~~l~g~v~gk~viIVDDii~TG~Tl~~a~~~L~~~ 239 (326)
T 3s5j_B 163 RNCTIVSPDAGGAKRVTSIADRLN-VDFALIHKERKKANEVDR--MVLVGDVKDRVAILVDDMADTCGTICHAADKLLSA 239 (326)
T ss_dssp GGCEEEESSGGGHHHHHHHHHHHT-CEEEEEEEC-------CC--EEEESCCTTSEEEEEEEEESSCHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCchHHHHHHHHHcC-CCEEEEEEEecCCCeeeE--EeccccCCCCEEEEEccccCCcHHHHHHHHHHHHc
Confidence 467999999999999998888763 455444333321111112 23566899999999999999999999999999999
Q ss_pred CCCCccEEEEEE--eeCHHHHHHHHHhCCCcEEEEEeecC
Q 023344 222 GVPESHIIFLNL--ISAPEGIHCVCKRFPSLKIVTSEIDV 259 (283)
Q Consensus 222 G~~e~~I~~v~~--vas~~gl~~l~~~~P~v~I~ta~iD~ 259 (283)
|+ ++|.+++. +.++.|+++|.+...+--++|..|..
T Consensus 240 Ga--~~v~~~~tH~v~~~~a~e~l~~~~i~~vv~t~tip~ 277 (326)
T 3s5j_B 240 GA--TRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQ 277 (326)
T ss_dssp TC--SEEEEEEEEECCCTTHHHHHHHSCCSEEEEETTSCC
T ss_pred CC--CEEEEEEEecccCchHHHHHhhCCCCEEEEecCCCC
Confidence 99 67888884 77899999999876666677767653
No 31
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=98.83 E-value=9.8e-09 Score=95.30 Aligned_cols=113 Identities=17% Similarity=0.157 Sum_probs=79.0
Q ss_pred cceeEEEecccchHHHHHHHHhccCceeeeEEEEecCCCCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHc
Q 023344 142 KKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEK 221 (283)
Q Consensus 142 ~~i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~ 221 (283)
++.++|+...+|..+...+.+.+ ++++..+--+|.. .+. .--..++.+++|++|+|+||+++||+|+.+|++.|+++
T Consensus 166 ~~~vVVspd~Ggv~~A~~lA~~L-~~p~~~i~K~r~~-~~~-v~~~~i~g~v~gk~viiVDDii~TG~Tl~~a~~~L~~~ 242 (319)
T 3dah_A 166 PDLLVVSPDVGGVVRARALAKQL-NCDLAIIDKRRPK-ANV-AEVMNIIGEVEGRTCVIMDDMVDTAGTLCKAAQVLKER 242 (319)
T ss_dssp TTEEEECCSSTTHHHHHHHHHHT-TCEEEC----------------------CCSEEEEEEEEESSCHHHHHHHHHHHHT
T ss_pred CCcEEEEeCCCccHHHHHHHHHh-CCCEEEEEEEecc-CCc-eEEEEccccCCCCEEEEEecccCchHHHHHHHHHHHHc
Confidence 47899999999999999988887 4555544333322 111 11235667899999999999999999999999999999
Q ss_pred CCCCccEEEEEE--eeCHHHHHHHHHhCCCcEEEEEeecC
Q 023344 222 GVPESHIIFLNL--ISAPEGIHCVCKRFPSLKIVTSEIDV 259 (283)
Q Consensus 222 G~~e~~I~~v~~--vas~~gl~~l~~~~P~v~I~ta~iD~ 259 (283)
|+ ++|.+++. +.++.++++|.+...+--++|..|..
T Consensus 243 Ga--~~v~~~~tH~v~s~~a~~~l~~~~i~~vv~t~tip~ 280 (319)
T 3dah_A 243 GA--KQVFAYATHPVLSGGAADRIAASALDELVVTDTIPL 280 (319)
T ss_dssp TC--SCEEEEEEEECCCTTHHHHHHTSSCSEEEEESSSCC
T ss_pred CC--CEEEEEEEeecCChHHHHHHHhCCCCEEEEeccccC
Confidence 99 67888884 66899999998766666677766644
No 32
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=98.81 E-value=2.3e-08 Score=85.64 Aligned_cols=117 Identities=17% Similarity=0.232 Sum_probs=88.4
Q ss_pred ChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhcc-CceeeeEEEE
Q 023344 97 SKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCK-GIKIGKILIH 175 (283)
Q Consensus 97 ~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~p-~a~~G~i~i~ 175 (283)
+..+....++||+.-+.+. +.| +++++|.|+++|..|..-+.+.+. ...+.++.++
T Consensus 15 s~~~I~~~i~rlA~eI~e~-------------------~~~----~~~vlvgIl~Gg~~fa~~L~~~l~~~~~~~~i~~s 71 (181)
T 3acd_A 15 SAEAIKKRVEELGGEIARD-------------------YQG----KTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAIS 71 (181)
T ss_dssp CHHHHHHHHHHHHHHHHHH-------------------TTT----CCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHH-------------------hCC----CCcEEEEEecCcHHHHHHHHHhcCCCccccceEEE
Confidence 4456677777777776552 112 257899999999999988888776 5677788877
Q ss_pred ecCCC----CceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHH
Q 023344 176 RDGDN----GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPE 238 (283)
Q Consensus 176 R~~~t----~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~ 238 (283)
+.... +.......++.+++||+|+|+|+++.||.|+.++++.|+++|+ ++|.+++++--+.
T Consensus 72 sy~~~~~~~g~~~~~~~~~~~i~gk~VllVDDIldTG~Tl~~~~~~l~~~~p--~sv~~avLl~K~~ 136 (181)
T 3acd_A 72 SYGNAFKSSGEVELLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKP--ASVRVAALLSKPS 136 (181)
T ss_dssp ------------CEEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCC--SEEEEEEEEECGG
T ss_pred EecCCcCCCCceEeccCCCcccCCCeeEEEEEEEcCchhHHHHHHHHhcCCC--CEEEEEEEEEcCc
Confidence 76432 3444456788899999999999999999999999999999998 7899999988655
No 33
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=98.70 E-value=4.6e-08 Score=92.83 Aligned_cols=113 Identities=14% Similarity=0.157 Sum_probs=82.0
Q ss_pred cceeEEEecccchHHHHHHHHhccCceeeeEEEEecCC-----CC----cee--------------------EeccCCCC
Q 023344 142 KKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGD-----NG----KQL--------------------IYEKLPND 192 (283)
Q Consensus 142 ~~i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~-----t~----~~~--------------------~y~~lP~~ 192 (283)
++.++|++.++|.++...+.+.+. ++...+-.+|... ++ +.+ .-..++.+
T Consensus 191 ~~~vVV~pd~GGv~~A~~lA~~L~-~pl~ii~k~r~~~~~e~~~gr~~~~~v~~~~~~~~g~~i~~~~~~~~~~~~l~g~ 269 (379)
T 2ji4_A 191 RNAVIVAKSPASAKRAQSFAERLR-LGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKPPITVVGD 269 (379)
T ss_dssp GGEEEEESSGGGHHHHHHHHHHTT-CEEEEEC-----------------------------------------CCCEESC
T ss_pred CCcEEEEEccchHHHHHHHHHHhC-CCEEEEEEEeecccccccccccCCcccccccccccccchhhhhhhcccccccccC
Confidence 367999999999999999888874 5555443344320 00 100 01135567
Q ss_pred CCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEE--EeeCHHHHHHHHHhCCCcEEEEEee
Q 023344 193 ISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLN--LISAPEGIHCVCKRFPSLKIVTSEI 257 (283)
Q Consensus 193 i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~--~vas~~gl~~l~~~~P~v~I~ta~i 257 (283)
++|++|+|+|||++||+|+.+|++.|+++|+ ++|.+++ .+.++++.++|.+...+--++|-.+
T Consensus 270 v~Gk~viiVDDii~TG~Tl~~a~~~L~~~Ga--~~v~~~~tH~v~s~~a~~~l~~s~id~vvvTnti 334 (379)
T 2ji4_A 270 VGGRIAIIVDDIIDDVDSFLAAAETLKERGA--YKIFVMATHGLLSSDAPRRIEESAIDEVVVTNTI 334 (379)
T ss_dssp CTTSEEEEEEEEECSCHHHHHHHHHHHHTTC--CEEEEEEEEECCCTTHHHHHHHSSCCEEEEESSS
T ss_pred CCCCEEEEEecCCCchHHHHHHHHHHHhcCC--CEEEEEEEeecCCcHHHHHHHhCCCCEEEEecCC
Confidence 8999999999999999999999999999999 6787777 4779999999987655555666555
No 34
>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A*
Probab=98.62 E-value=1.4e-07 Score=82.99 Aligned_cols=95 Identities=22% Similarity=0.215 Sum_probs=71.3
Q ss_pred eeEEEecccchHHHHHHHHhcc-----CceeeeEEEEecCC----------CCce-e--Eec---cCCCCCCCcEEEEEc
Q 023344 144 LCGVSIVRSGESMENALRACCK-----GIKIGKILIHRDGD----------NGKQ-L--IYE---KLPNDISERHVLLLD 202 (283)
Q Consensus 144 i~~V~IlRaG~~m~~~l~~~~p-----~a~~G~i~i~R~~~----------t~~~-~--~y~---~lP~~i~~~~Vil~D 202 (283)
.++|.|+|+|.++...+.+.+. ..+++++.+..... .+.. . .+. .++.+++|++|||+|
T Consensus 31 ~vIVgI~~GG~~~A~~La~~L~~~~~~~lpi~~i~~s~y~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~Gk~VLIVD 110 (221)
T 2xbu_A 31 DLIIAIGGGGFIPARILRTFLKEPGVPTIRIFAIILSLYEDLNSVGSEVEEVGVKVSRTQWIDYEQCKLDLVGKNVLIVD 110 (221)
T ss_dssp SEEEEEHHHHHHHHHHHHHHHCCTTSCCCEEEEEEEEEEC-------------CEEEEEECCCHHHHTCCCTTCEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHhCCCCCCCccEEEEEEEEecCCccccccccccCceeeeeeeeecccccccCCCCEEEEEe
Confidence 4799999999999999888773 45788877553321 1211 1 112 246789999999999
Q ss_pred CcccchHHHHHHHHHHHH--------cCCC-------CccEEEEEEeeCHH
Q 023344 203 PVLATGNSANQAIQLLIE--------KGVP-------ESHIIFLNLISAPE 238 (283)
Q Consensus 203 p~iaTG~t~~~ai~~L~~--------~G~~-------e~~I~~v~~vas~~ 238 (283)
++++||+|+.+|++.|++ +|+. +++|.+++++--+.
T Consensus 111 DIidTG~Tl~aa~~~L~~~ga~~~~~~g~~~~~~~~~~~~v~iavL~~K~~ 161 (221)
T 2xbu_A 111 EVDDTRTTLHYALSELEKDAAEQAKAKGIDTEKSPEMKTNFGIFVLHDKQK 161 (221)
T ss_dssp EEESSSHHHHHHHHHHHHHHHHHHHHTTCCTTTCGGGSCEEEEEEEEEECS
T ss_pred ccCCcHHHHHHHHHHHHhhcchhhhhcCccccccccCcceEEEEEEEeccc
Confidence 999999999999999997 7863 36899999887553
No 35
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=98.59 E-value=4e-07 Score=83.27 Aligned_cols=97 Identities=21% Similarity=0.160 Sum_probs=74.1
Q ss_pred cceeEEEecccchHHHHHHHHhccCceeeeEEEEecCCCCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHc
Q 023344 142 KKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEK 221 (283)
Q Consensus 142 ~~i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~ 221 (283)
++.++|++..+|..+...+.+.+. ++...+-=+|. .++. ........+++|++|+|+||+++||+|+.++++.|+++
T Consensus 153 ~~~vVV~pd~Gg~~~A~~lA~~L~-~p~~~i~K~r~-~~g~-v~i~~~~~dv~gk~vliVDDii~TG~Tl~~a~~~L~~~ 229 (286)
T 3lrt_A 153 DVDYVVSPDDGGLARVADISAKLG-KKHFFIEKKRI-DDRT-VEMKVPNVDVNGKKLLIVDDIISTGGTIAKSSGLLREK 229 (286)
T ss_dssp CCSEEEESSSSSHHHHHHHHHHHT-CEEEEEEEEEE-TTEE-EEEEESCCCCTTCEEEEEEEEESSCHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCccHHHHHHHHHhC-CCeEEEeeeec-CCCc-EEEeeccccCCcCEEEEEeccccccHHHHHHHHHHHhC
Confidence 467899999999999998888763 44444433342 2221 11223455789999999999999999999999999999
Q ss_pred CCCCccEEEEEE--eeCHHHHHHH
Q 023344 222 GVPESHIIFLNL--ISAPEGIHCV 243 (283)
Q Consensus 222 G~~e~~I~~v~~--vas~~gl~~l 243 (283)
|+ +.|.+++. +.+..|.++|
T Consensus 230 Ga--~~v~~~~th~v~s~~a~~~l 251 (286)
T 3lrt_A 230 GA--SKIYVSAVHGLFVNGSENKI 251 (286)
T ss_dssp TC--SEEEEEEEEECCCTTHHHHH
T ss_pred CC--CEEEEEEEEeecCchHHHHH
Confidence 99 67888885 4488999999
No 36
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=98.53 E-value=7.3e-07 Score=76.45 Aligned_cols=96 Identities=20% Similarity=0.167 Sum_probs=67.3
Q ss_pred eEEEecccchHHHHHHHHhccCceeeeEEEEecCCCCc---e---------------eEeccCCCCCCCcEEEEEcCccc
Q 023344 145 CGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGK---Q---------------LIYEKLPNDISERHVLLLDPVLA 206 (283)
Q Consensus 145 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t~~---~---------------~~y~~lP~~i~~~~Vil~Dp~ia 206 (283)
++||+.+.|..+...+.+.+. .+. +.+ |...+.+ . .+...-+...+|++|+|+||+++
T Consensus 56 ~Iv~v~~rG~~~a~~la~~l~-~p~--~~~-rk~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VllVDDvit 131 (197)
T 1y0b_A 56 KIVTIESSGIAPAVMTGLKLG-VPV--VFA-RKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHVLIIDDFLA 131 (197)
T ss_dssp EEEEETTTTHHHHHHHHHHHT-CCE--EEE-BSSCCSSCCSSEEEEEEEETTTTEEEEEEEEGGGCCTTCEEEEEEEEES
T ss_pred EEEEEcccCHHHHHHHHHHhC-CCE--EEE-EecCCCCCCCceEEEeeeccccCceEEEEEeccccCCcCEEEEEEcccc
Confidence 577888999999888877653 222 222 2222211 0 11111112257999999999999
Q ss_pred chHHHHHHHHHHHHcCCCCccEEEEEEeeCH--HHHHHHHHh
Q 023344 207 TGNSANQAIQLLIEKGVPESHIIFLNLISAP--EGIHCVCKR 246 (283)
Q Consensus 207 TG~t~~~ai~~L~~~G~~e~~I~~v~~vas~--~gl~~l~~~ 246 (283)
||+|+.+|++.|++.|+ +.|.+++++..+ .|.++|.+.
T Consensus 132 TG~Tl~~a~~~L~~~Ga--~~V~~~~l~~~~~~~~~~~l~~~ 171 (197)
T 1y0b_A 132 NGQAAHGLVSIVKQAGA--SIAGIGIVIEKSFQPGRDELVKL 171 (197)
T ss_dssp SCHHHHHHHHHHHHTTC--EEEEEEEEEEETTSTHHHHHHHT
T ss_pred cCHHHHHHHHHHHHCCC--EEEEEEEEEEecccchhhhHHhc
Confidence 99999999999999998 678888877754 688888764
No 37
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=98.50 E-value=7.7e-07 Score=75.24 Aligned_cols=94 Identities=18% Similarity=0.158 Sum_probs=66.4
Q ss_pred eEEEecccchHHHHHHHHhccCceeeeEEEEecCCCC--------------ceeEeccCCCCCCCcEEEEEcCcccchHH
Q 023344 145 CGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNG--------------KQLIYEKLPNDISERHVLLLDPVLATGNS 210 (283)
Q Consensus 145 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t~--------------~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t 210 (283)
++|++-+.|.++...+.+.+. .+. +.++ ...+. ...+...-+..++|++|+|+||+++||+|
T Consensus 60 ~vv~v~~~G~~~a~~la~~l~-~p~--~~~r-~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VllVDDvitTG~T 135 (180)
T 1zn8_A 60 YIAGLDSRGFLFGPSLAQELG-LGC--VLIR-KRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGT 135 (180)
T ss_dssp EEEEETTTHHHHHHHHHHHHT-CEE--EEEE-ETTCCCSSEEEEEEEETTEEEEEEEETTSSCTTCEEEEEEEEESSSHH
T ss_pred EEEEECCCchHHHHHHHHHhC-CCE--EEEE-ecCCCCcccccHHHHHhcCccEEEEeccccCCCCEEEEEcCCcccHHH
Confidence 577778899988888877663 333 2233 22221 11122222333689999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEEEEEeeCH--HHHHHHH
Q 023344 211 ANQAIQLLIEKGVPESHIIFLNLISAP--EGIHCVC 244 (283)
Q Consensus 211 ~~~ai~~L~~~G~~e~~I~~v~~vas~--~gl~~l~ 244 (283)
+.++++.|+++|+ +.|.+++++..+ +|.+++.
T Consensus 136 l~~~~~~L~~~Ga--~~v~~~~l~~~~~~~~~~~l~ 169 (180)
T 1zn8_A 136 MNAACELLGRLQA--EVLECVSLVELTSLKGREKLA 169 (180)
T ss_dssp HHHHHHHHHHTTC--EEEEEEEEEEEGGGCHHHHHT
T ss_pred HHHHHHHHHHcCC--EEEEEEEEEEccCcchhhhhc
Confidence 9999999999998 678888877765 5788774
No 38
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=98.46 E-value=7.2e-07 Score=76.28 Aligned_cols=102 Identities=15% Similarity=0.110 Sum_probs=68.2
Q ss_pred eEEEecccchHHHHHHHHhccCceeeeEEEEecCCCC--------------ceeEeccCCCCCCCcEEEEEcCcccchHH
Q 023344 145 CGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNG--------------KQLIYEKLPNDISERHVLLLDPVLATGNS 210 (283)
Q Consensus 145 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t~--------------~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t 210 (283)
++|++.+.|..+...+.+.+. .+. +.+ |...+. ...+..+.....+|++|+|+||+++||+|
T Consensus 66 ~Iv~v~~rG~~~a~~la~~l~-~p~--~~~-rk~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLlVDDvitTG~T 141 (190)
T 2dy0_A 66 KVVGTEARGFLFGAPVALGLG-VGF--VPV-RKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGT 141 (190)
T ss_dssp EEEEETTHHHHHHHHHHHHHT-CEE--EEE-BSTTCCCSCEEEEEEEETTEEEEEEEEGGGCCTTCEEEEEEEEESSCHH
T ss_pred EEEEECcccHHHHHHHHHHHC-CCE--EEE-EecCCCCcccccceehhhcCceEEEEeccccCCcCEEEEEEccccchHH
Confidence 567777888888877776652 222 222 322221 11111111223579999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEEEEEeeCH--HHHHHHHHhCCCcEEEE
Q 023344 211 ANQAIQLLIEKGVPESHIIFLNLISAP--EGIHCVCKRFPSLKIVT 254 (283)
Q Consensus 211 ~~~ai~~L~~~G~~e~~I~~v~~vas~--~gl~~l~~~~P~v~I~t 254 (283)
+.++++.|++.|+ +.|.+++++..+ .|.+++.+. .+.+++
T Consensus 142 l~~a~~~L~~~Ga--~~V~~~~l~~~~~~~~~~~l~~~--g~~v~s 183 (190)
T 2dy0_A 142 IEATVKLIRRLGG--EVADAAFIINLFDLGGEQRLEKQ--GITSYS 183 (190)
T ss_dssp HHHHHHHHHHTTC--EEEEEEEEEEEGGGCHHHHHHTT--TCEEEE
T ss_pred HHHHHHHHHHcCC--EEEEEEEEEEccCcchHHHHhhC--CCcEEE
Confidence 9999999999998 678888877765 488888542 355554
No 39
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=98.42 E-value=1.7e-06 Score=73.74 Aligned_cols=95 Identities=23% Similarity=0.185 Sum_probs=66.5
Q ss_pred eEEEecccchHHHHHHHHhccCceeeeEEEEecCCC--------------C-ceeEeccCCCCCCCcEEEEEcCcccchH
Q 023344 145 CGVSIVRSGESMENALRACCKGIKIGKILIHRDGDN--------------G-KQLIYEKLPNDISERHVLLLDPVLATGN 209 (283)
Q Consensus 145 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t--------------~-~~~~y~~lP~~i~~~~Vil~Dp~iaTG~ 209 (283)
++||+.+.|..+...+.+.+. .+. +.+++ ..+ + ...+...-+..++|++|+|+||+++||+
T Consensus 56 ~Iv~vp~rG~~~A~~la~~l~-~p~--~~~rk-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLLVDDVitTG~ 131 (186)
T 1l1q_A 56 KVVGIESRGFILGGIVANSLG-VGF--VALRK-AGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGG 131 (186)
T ss_dssp EEEEESGGGHHHHHHHHHHHT-CEE--EEEEE-TTSSCSSEEEEEEEETTEEEEEEEEEGGGCCTTCCEEEEEEEESSSH
T ss_pred EEEEcCcccHHHHHHHHHHhC-CCE--EEEEe-cCCCCCceechhhhhhcCcceEEEEecccCCCcCEEEEEecccccHH
Confidence 577788999999988877653 222 22221 111 1 1112211122258999999999999999
Q ss_pred HHHHHHHHHHHcCCCCc--cEEEEEEeeCH--HHHHHHHH
Q 023344 210 SANQAIQLLIEKGVPES--HIIFLNLISAP--EGIHCVCK 245 (283)
Q Consensus 210 t~~~ai~~L~~~G~~e~--~I~~v~~vas~--~gl~~l~~ 245 (283)
|+.++++.|++.|+ + .|.+++++..+ .|-+++..
T Consensus 132 Tl~aa~~~L~~~Ga--~~~~V~~~~l~~k~~~~g~~~l~~ 169 (186)
T 1l1q_A 132 TLLAAIELCETAGV--KPENIYINVLYEIEALKGREKVGQ 169 (186)
T ss_dssp HHHHHHHHHHHTTC--CGGGEEEEEEEECGGGCHHHHHTT
T ss_pred HHHHHHHHHHHcCC--CcceEEEEEEEEccCccHHHHHhh
Confidence 99999999999998 6 78888888776 47888843
No 40
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=98.38 E-value=1.6e-06 Score=73.89 Aligned_cols=95 Identities=17% Similarity=0.169 Sum_probs=66.3
Q ss_pred eeEEEecccchHHHHHHHHhccCceeeeEEEEecCCC-------------CceeEeccCCCCCCCcEEEEEcCcccchHH
Q 023344 144 LCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDN-------------GKQLIYEKLPNDISERHVLLLDPVLATGNS 210 (283)
Q Consensus 144 i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t-------------~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t 210 (283)
-++|++.+.|..+...+.+.+. .+.- .+.+...+ +...+...-+..++|++|+|+||+++||+|
T Consensus 61 d~Iv~v~~~G~~~a~~la~~l~-~p~~--~~rk~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~T 137 (187)
T 1g2q_A 61 DYIVGLESRGFLFGPTLALALG-VGFV--PVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGS 137 (187)
T ss_dssp CEEEEETTTHHHHHHHHHHHHT-CEEE--EEEETTCSCSSEEEEEEECSSCEEEEEEETTSSCTTCEEEEEEEEESSCHH
T ss_pred CEEEEEccCcHHHHHHHHHHHC-CCEE--EEEEeCCCCcceecHHHHHHhCCCcEEEecccCCCcCEEEEECCCcccHHH
Confidence 3688889999999888877663 3322 23332221 111112222335789999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEEEEEeeCH--HHHHHH
Q 023344 211 ANQAIQLLIEKGVPESHIIFLNLISAP--EGIHCV 243 (283)
Q Consensus 211 ~~~ai~~L~~~G~~e~~I~~v~~vas~--~gl~~l 243 (283)
+.++++.|+++|+ +.|.+++++..+ .|-+++
T Consensus 138 l~~~~~~L~~~Ga--~~v~~~~l~~~~~~~g~~~l 170 (187)
T 1g2q_A 138 AAAAGELVEQLEA--NLLEYNFVMELDFLKGRSKL 170 (187)
T ss_dssp HHHHHHHHHHTTC--EEEEEEEEEECCCSSCCCCC
T ss_pred HHHHHHHHHHcCC--eEEEEEEEEEccCcCchhhc
Confidence 9999999999998 678888888766 355544
No 41
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=98.38 E-value=1.3e-06 Score=74.16 Aligned_cols=102 Identities=17% Similarity=0.217 Sum_probs=68.4
Q ss_pred eEEEecccchHHHHHHHHhccCceeeeEEEEecCCC--CceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcC
Q 023344 145 CGVSIVRSGESMENALRACCKGIKIGKILIHRDGDN--GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKG 222 (283)
Q Consensus 145 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t--~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G 222 (283)
++|++.++|.++...+.+.+. .++..+.+ |.+.+ +...... ...++|++|+|+||+++||+|+.++++.|++.|
T Consensus 66 ~vv~v~~gG~~~a~~la~~l~-~~~~~~~~-rk~~~~~g~~~~~~--g~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~G 141 (180)
T 2p1z_A 66 AVGGLTLGADPVATSVMHADG-REIHAFVV-RKEAKKHGMQRRIE--GPDVVGKKVLVVEDTTTTGNSPLTAVKALREAG 141 (180)
T ss_dssp EEEEETTTHHHHHHHHHHSSS-SCCEEEEE-CSCCC-CC-CCSEE--SSCCTTCEEEEEEEECSSSHHHHHHHHHHHHHT
T ss_pred EEEEecCCCHHHHHHHHHHHC-CCCCeEEE-Eeccccccchhhcc--CCCCCcCEEEEEEeccCCcHHHHHHHHHHHHcC
Confidence 688888999999998888663 22333333 33321 1110011 123689999999999999999999999999999
Q ss_pred CCCccEEEEEEeeCHH-HHHHHHHhCCCcEEEE
Q 023344 223 VPESHIIFLNLISAPE-GIHCVCKRFPSLKIVT 254 (283)
Q Consensus 223 ~~e~~I~~v~~vas~~-gl~~l~~~~P~v~I~t 254 (283)
+ +.|.+++++..++ |.+++.+ + ++.+++
T Consensus 142 a--~~v~~~~l~~~~~~g~~~l~~-~-g~~~~s 170 (180)
T 2p1z_A 142 A--EVVGVATVVDRATGAADVIAA-E-GLEYRY 170 (180)
T ss_dssp C--EEEEEEEEEC-CCCHHHHHHT-T-TCCEEE
T ss_pred C--eEEEEEEEEEcCcchHHHHHh-c-CCeEEE
Confidence 8 6787777776544 5666643 2 344444
No 42
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=98.38 E-value=4.1e-07 Score=77.61 Aligned_cols=67 Identities=48% Similarity=0.912 Sum_probs=59.6
Q ss_pred CCeEEEEeCCchhHHHHhhhhccccCCCCHHHHHHHh------------------hhccccCCCCchHHHHHHHHHHhhh
Q 023344 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQY------------------ADVIIPRGGDNHVAIDLIVQHIHTK 62 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~~qy------------------aD~iip~~~~~~~a~~~i~~~i~~~ 62 (283)
+|.++|+|++.+.++.|++.|+..++|++...+.++| ||+||++++.+..+++.+.++|++.
T Consensus 125 ~d~~i~ld~~~~~~~~r~l~r~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~~~aD~ii~~~~~~~~~~~~~~~~i~~~ 204 (211)
T 3asz_A 125 MDLKVFVDADADERFIRRLKRDVLERGRSLEGVVAQYLEQVKPMHLHFVEPTKRYADVIVPRGGQNPVALEMLAAKALAR 204 (211)
T ss_dssp CSEEEEEECCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHTHHHHHHHTTGGGGGGCSEEEESTTSCHHHHHHHHHHHTHH
T ss_pred cCEEEEEeCCHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhhhhhHHHhcccchhcCeEEEeCCCcchHHHHHHHHHHHHH
Confidence 5899999999999999999999999999998877654 8999999999999999999999998
Q ss_pred hcccc
Q 023344 63 LGQHD 67 (283)
Q Consensus 63 l~~~~ 67 (283)
+.+.+
T Consensus 205 ~~~~~ 209 (211)
T 3asz_A 205 LARMG 209 (211)
T ss_dssp HHC--
T ss_pred HHhhc
Confidence 87654
No 43
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*
Probab=98.35 E-value=1.4e-07 Score=83.73 Aligned_cols=106 Identities=9% Similarity=0.038 Sum_probs=75.6
Q ss_pred ceeEEEecccchHHHHHHHHhcc-CceeeeEEEEec--CCC-CceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHH
Q 023344 143 KLCGVSIVRSGESMENALRACCK-GIKIGKILIHRD--GDN-GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLL 218 (283)
Q Consensus 143 ~i~~V~IlRaG~~m~~~l~~~~p-~a~~G~i~i~R~--~~t-~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L 218 (283)
+.++|.++++|..+...+.+.+. ...++++.+.+. ..+ +...+...++.+++||+|+|+|+++.||.|+.++++.|
T Consensus 62 ~~vvVgi~~Gg~~~a~~La~~L~~p~~v~~i~vs~y~~~~s~~v~i~~~~l~~~v~Gk~VLIVDDIidTG~Tl~~a~~~L 141 (230)
T 1dqn_A 62 PVTLVALLTGAYLYASLLTVHLTFPYTLHFVKVSSYKGTRQESVVFDEEDLKQLKEKREVVLIDEYVDSGHTIFSIQEQI 141 (230)
T ss_dssp CEEEEEETTTHHHHHHHHHTTCCSCEEEEEECCEEEECSSCEEEECCHHHHHHHHHCSSEEEEEEEESSSHHHHHHHHHS
T ss_pred CcEEEEECCCCHHHHHHHHHHhCCCceEEEEEEEEeCCCccCceEEEeccCccCCCCCEEEEEeeEcChHHHHHHHHHHh
Confidence 57899999999999999998886 234555555443 222 22221234556789999999999999999999999999
Q ss_pred HHcCCCCccEEEEEEeeCHHHHHHHHHhCCCcEEEEE
Q 023344 219 IEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTS 255 (283)
Q Consensus 219 ~~~G~~e~~I~~v~~vas~~gl~~l~~~~P~v~I~ta 255 (283)
++ |.+++++..+..+.+-....||.+-|++
T Consensus 142 ~~-------V~vavLl~k~~~~~r~~~i~~D~~~yvg 171 (230)
T 1dqn_A 142 KH-------AKICSCFVKDVDAIKKHSALADTKMFYG 171 (230)
T ss_dssp TT-------CEEEEEEESCHHHHHTSTTTTTCCEEEE
T ss_pred hc-------CEEEEEEECCccccccCCcCCCCceEEE
Confidence 86 7788888888743433344565444444
No 44
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=98.35 E-value=2.4e-06 Score=72.32 Aligned_cols=101 Identities=17% Similarity=0.206 Sum_probs=70.2
Q ss_pred eeEEEecccchHHHHHHHHhccCceeeeEEEEecCCC--CceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHc
Q 023344 144 LCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDN--GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEK 221 (283)
Q Consensus 144 i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t--~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~ 221 (283)
.++|++.+.|.++...+.+.+. .+. .+.|.+.+ +... .+..+++|++|+|+||+++||+|+.++++.|++.
T Consensus 60 ~~iv~v~~~G~~~a~~la~~l~-~p~---~~~r~~~~~~g~~~---~i~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ 132 (178)
T 2yzk_A 60 SAVIGVATGGLPWAAMLALRLS-KPL---GYVRPERKGHGTLS---QVEGDPPKGRVVVVDDVATTGTSIAKSIEVLRSN 132 (178)
T ss_dssp SEEEEETTTTHHHHHHHHHHHT-CCE---EEECCCCTTSCCCC---CCBTCCCSSEEEEEEEEESSSHHHHHHHHHHHHT
T ss_pred CEEEEecccchHHHHHHHHHHC-CCE---EEEEccccccCccc---eecccCCCCEEEEEEeccCCcHHHHHHHHHHHHc
Confidence 3677888999999888877653 333 23443321 1110 1224678999999999999999999999999999
Q ss_pred CCCCccEEEEEEeeCH-HHHHHHHHhCCCcEEEEE
Q 023344 222 GVPESHIIFLNLISAP-EGIHCVCKRFPSLKIVTS 255 (283)
Q Consensus 222 G~~e~~I~~v~~vas~-~gl~~l~~~~P~v~I~ta 255 (283)
|+ +.+.+++++.-+ .|.+++.+. .+.+++.
T Consensus 133 Ga--~~v~~~~l~~r~~~~~~~l~~~--g~~~~sl 163 (178)
T 2yzk_A 133 GY--TVGTALVLVDRGEGAGELLARM--GVRLVSV 163 (178)
T ss_dssp TC--EEEEEEEEEECCSSHHHHHHTT--TCEEEEE
T ss_pred CC--eEEEEEEEEEcCcCHHHHHHHc--CCcEEEE
Confidence 98 567777776643 567777532 4555553
No 45
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=98.33 E-value=2.9e-06 Score=75.22 Aligned_cols=113 Identities=19% Similarity=0.268 Sum_probs=72.4
Q ss_pred eEEEecccchHHHHHHHHhccCceeeeEEEEecCC-C----------------CceeEeccCCCCCCCcEEEEEcCcccc
Q 023344 145 CGVSIVRSGESMENALRACCKGIKIGKILIHRDGD-N----------------GKQLIYEKLPNDISERHVLLLDPVLAT 207 (283)
Q Consensus 145 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~-t----------------~~~~~y~~lP~~i~~~~Vil~Dp~iaT 207 (283)
++|++.+.|.++...+.+.+. .+. +.+++... . +...+..+-....+|++|+|+||+++|
T Consensus 74 ~Ivgv~~gG~~~a~~lA~~L~-~p~--~~~rk~~k~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~~~Gk~VLIVDDvitT 150 (236)
T 1qb7_A 74 HILGFDARGFLFGPMIAVELE-IPF--VLMRKADKNAGLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLAT 150 (236)
T ss_dssp EEEEETTGGGGTHHHHHHHHT-CCE--EEEBCGGGCCSSEEECCCCCCCTTSCCCCCCEEETTSSCTTCEEEEEEEEESS
T ss_pred EEEEECcCcHHHHHHHHHHhC-CCE--EEEEEecCCCCcceeceeccchhhhcCcceEEEecCCCCCcCEEEEEeccccc
Confidence 567778888888887777653 222 22322111 0 100111111223479999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCccEEEEEEeeCH--HHHHHHHH----hCCCcEEEEEeecCCCC
Q 023344 208 GNSANQAIQLLIEKGVPESHIIFLNLISAP--EGIHCVCK----RFPSLKIVTSEIDVALN 262 (283)
Q Consensus 208 G~t~~~ai~~L~~~G~~e~~I~~v~~vas~--~gl~~l~~----~~P~v~I~ta~iD~~ln 262 (283)
|+|+.+|++.|++.|+ +.+.+++++.-. .|.+++.+ .+.++.+++...-..+.
T Consensus 151 G~Tl~~a~~~L~~~Ga--~~v~v~~l~~~~~~~g~~~l~~~~~~~~~g~~v~sl~~~~~~~ 209 (236)
T 1qb7_A 151 GGTALSGLQLVEASDA--VVVEMVSILSIPFLKAAEKIHSTANSRYKDIKFISLLSDDALT 209 (236)
T ss_dssp CHHHHHHHHHHHHTTC--EEEEEEEEEECGGGCHHHHHHHHHHHTTTTCCEEEEEEGGGCC
T ss_pred HHHHHHHHHHHHHcCC--eEEEEEEEEEcccccHHHHHhhhcccccCCCcEEEEEEccccc
Confidence 9999999999999998 677788877765 58888875 23345555533323343
No 46
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=98.24 E-value=1.6e-06 Score=72.73 Aligned_cols=90 Identities=12% Similarity=0.155 Sum_probs=62.3
Q ss_pred eEEEecccchHHHHHHHHhccCceeeeEEEEecCC---CCcee-----------EeccCCCC----CCCcEEEEEcCccc
Q 023344 145 CGVSIVRSGESMENALRACCKGIKIGKILIHRDGD---NGKQL-----------IYEKLPND----ISERHVLLLDPVLA 206 (283)
Q Consensus 145 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~---t~~~~-----------~y~~lP~~----i~~~~Vil~Dp~ia 206 (283)
++|++.++|.++...+.+.+. .+. +.+.+... +.++. ....+..+ ++|++|+|+||+++
T Consensus 55 ~Iv~v~~gg~~~a~~la~~l~-~p~--~~~rk~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~gk~VllVDDvit 131 (175)
T 1vch_A 55 ILFTTETSPIPLTHVLAEALG-LPY--VVARRRRRPYMEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLVSDVVA 131 (175)
T ss_dssp EEEEESSTHHHHHHHHHHHHT-CCE--EEEBSSCCTTCCSCEEEECCC------CEEEECHHHHHHHTTCEEEEEEEEES
T ss_pred EEEEeCCcChHHHHHHHHHhC-CCE--EEEEecCCCCCCcceeeeeeccccCCceEEEEecccccccCCCEEEEEecccc
Confidence 677888999999988877664 333 22322111 11110 01111222 48999999999999
Q ss_pred chHHHHHHHHHHHHcCCCCccEEEEEEeeCHHH
Q 023344 207 TGNSANQAIQLLIEKGVPESHIIFLNLISAPEG 239 (283)
Q Consensus 207 TG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~g 239 (283)
||+|+.++++.|++.|+ +.|.+++++..+.+
T Consensus 132 TG~Tl~~~~~~L~~~Ga--~~V~~~~l~~~~~~ 162 (175)
T 1vch_A 132 SGETMRAMEKMVLRAGG--HVVARLAVFRQGTP 162 (175)
T ss_dssp SSHHHHHHHHHHHHTTC--EEEEEEEEEECSCC
T ss_pred chHHHHHHHHHHHHcCC--eEEEEEEEEecCCC
Confidence 99999999999999998 67888888876655
No 47
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=98.24 E-value=4.9e-06 Score=72.07 Aligned_cols=101 Identities=12% Similarity=0.239 Sum_probs=69.0
Q ss_pred eEEEecccchHHHHHHHHhccCceeeeEEEEecCCC--CceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcC
Q 023344 145 CGVSIVRSGESMENALRACCKGIKIGKILIHRDGDN--GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKG 222 (283)
Q Consensus 145 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t--~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G 222 (283)
++|++-.+|.++...+.+.+. .+. +.. |.+.+ +..-.... ...+|++|+|+||+++||+|+.++++.|++.|
T Consensus 65 ~Iv~v~~~g~~~a~~la~~l~-~p~--~~~-rk~~k~~g~~~~~~g--~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~G 138 (205)
T 2wns_A 65 TVCGVPYTALPLATVICSTNQ-IPM--LIR-RKETKDYGTKRLVEG--TINPGETCLIIEDVVTSGSSVLETVEVLQKEG 138 (205)
T ss_dssp EEEECTTTTHHHHHHHHHHHT-CCE--EEE-CCTTTTSSSCCSEES--CCCTTCBEEEEEEEESSSHHHHHHHHHHHHTT
T ss_pred EEEEcCCchHHHHHHHHHHHC-cCE--EEE-ecCcCccCccccccC--CCCCCCEEEEEEEeccccHHHHHHHHHHHHCC
Confidence 577888889999888877663 333 222 33221 11101111 11378999999999999999999999999999
Q ss_pred CCCccEEEEEEeeCH-HHHHHHHHhCCCcEEEEE
Q 023344 223 VPESHIIFLNLISAP-EGIHCVCKRFPSLKIVTS 255 (283)
Q Consensus 223 ~~e~~I~~v~~vas~-~gl~~l~~~~P~v~I~ta 255 (283)
+ +.+.+++++... .|.+++.+. .+.+++.
T Consensus 139 a--~~v~~~~l~~~~~~~~~~l~~~--g~~v~sl 168 (205)
T 2wns_A 139 L--KVTDAIVLLDREQGGKDKLQAH--GIRLHSV 168 (205)
T ss_dssp C--BCCEEEEEEECCSSHHHHHHTT--TCEEEEE
T ss_pred C--EEEEEEEEEEcCcchHHHHHHc--CCeEEEE
Confidence 8 678888888776 567777532 4555543
No 48
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=98.20 E-value=8.6e-06 Score=72.32 Aligned_cols=100 Identities=14% Similarity=0.194 Sum_probs=64.4
Q ss_pred eEEEecccchHHHHHHHHhccCceeeeEEEEecCCC--CceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcC
Q 023344 145 CGVSIVRSGESMENALRACCKGIKIGKILIHRDGDN--GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKG 222 (283)
Q Consensus 145 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t--~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G 222 (283)
++|++..+|.++...+.+.+. .+. +.+ |.+.+ +...... ....+|++|+|+||+++||+|+.++++.|++.|
T Consensus 91 ~Ivg~~~gGi~~a~~lA~~L~-~p~--~~v-rk~~k~~G~~~~i~--g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~G 164 (234)
T 3m3h_A 91 VIAGTATAGIAHAAWVSDRMD-LPM--CYV-RSKAKGHGKGNQIE--GKAEKGQKVVVVEDLISTGGSAITCVEALREAG 164 (234)
T ss_dssp EEEEC---CHHHHHHHHHHHT-CCE--EEE-C---------CCEE--SCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTT
T ss_pred EEEEeccchHHHHHHHHHHcC-CCE--EEE-EEeeccCCcceEEe--cccCCCCEEEEEecccchhHHHHHHHHHHHHCC
Confidence 577777899998887776653 232 333 33222 1111011 123579999999999999999999999999999
Q ss_pred CCCccEEEEEEeeC--HHHHHHHHHhCCCcEEEE
Q 023344 223 VPESHIIFLNLISA--PEGIHCVCKRFPSLKIVT 254 (283)
Q Consensus 223 ~~e~~I~~v~~vas--~~gl~~l~~~~P~v~I~t 254 (283)
+ +.+.+++++.. +.|.+++.+. .+++++
T Consensus 165 a--~vv~v~~l~~~~~~~~~e~l~~~--gi~v~s 194 (234)
T 3m3h_A 165 C--EVLGIVSIFTYELEAGKEKLEAA--NVASYS 194 (234)
T ss_dssp C--EEEEEEEEEECCCHHHHHHHHHT--TCCEEE
T ss_pred C--EEEEEEEEEECcCchHHHHHHhc--CCCEEE
Confidence 8 56777777764 6778888653 455554
No 49
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=98.20 E-value=1.1e-05 Score=72.11 Aligned_cols=94 Identities=12% Similarity=0.145 Sum_probs=66.4
Q ss_pred eEEEecccchHHHHHHHHhccCceeeeEEEEecCCCC--ceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcC
Q 023344 145 CGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNG--KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKG 222 (283)
Q Consensus 145 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t~--~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G 222 (283)
++|++..+|.++...+.+.+. .+ .+.+ |.+.+. ...... -..++|++|+|+||+++||+|+.++++.|++.|
T Consensus 103 vIvg~~~gGi~~A~~lA~~L~-~p--~~~v-rk~~k~~G~~~~ie--g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~G 176 (243)
T 3dez_A 103 VIAGTATAGIPHGAIIADKMN-LP--LAYI-RSKPKDHGAGNQIE--GRVTKGQKMVIIEDLISTGGSVLDAVAAAQREG 176 (243)
T ss_dssp EEEEETTTTHHHHHHHHHHTT-CC--EEEE-CSSCC-----CCEE--SCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTT
T ss_pred EEEEecCchHHHHHHHHHHcC-CC--EEEE-EEeeccCCceeEEE--eccCCCCEEEEEEeeccccHHHHHHHHHHHHCC
Confidence 577888899999888777653 22 2333 333221 111111 124689999999999999999999999999999
Q ss_pred CCCccEEEEEEeeC--HHHHHHHHHh
Q 023344 223 VPESHIIFLNLISA--PEGIHCVCKR 246 (283)
Q Consensus 223 ~~e~~I~~v~~vas--~~gl~~l~~~ 246 (283)
+ +.+.+++++.- ..|.+++.+.
T Consensus 177 a--~vv~v~~l~d~~~~~a~e~l~~~ 200 (243)
T 3dez_A 177 A--DVLGVVAIFTYELPKATANFEKA 200 (243)
T ss_dssp C--EEEEEEEEEECCCHHHHHHHHHH
T ss_pred C--EEEEEEEEEECCCchHHHHHHhc
Confidence 8 56777777764 6788888664
No 50
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A*
Probab=98.19 E-value=2e-06 Score=75.71 Aligned_cols=64 Identities=63% Similarity=1.016 Sum_probs=55.9
Q ss_pred CCeEEEEeCCchhHHHHhhhhccccCCCCHHHHHHHh------------------hhccccCCCCchHHHHHHHHHHhhh
Q 023344 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQY------------------ADVIIPRGGDNHVAIDLIVQHIHTK 62 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~~qy------------------aD~iip~~~~~~~a~~~i~~~i~~~ 62 (283)
+|.+|||.++.+.++.||+.||+ ++|++.+++.+|| ||+|||++.+|+.+++.+.+++.+.
T Consensus 154 ~~~~i~v~th~~~~~~r~~~r~~-~~G~~~e~~~~~~~~~~~~~~~~~i~p~~~~aD~vi~~~~dn~~~~~~l~~~i~~~ 232 (245)
T 2jeo_A 154 FHLRLFVDTDSDVRLSRRVLRDV-RRGRDLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDI 232 (245)
T ss_dssp CSEEEEEECCHHHHHHHHHHHHT-C---CHHHHHHHHHHTHHHHHHHHTGGGGGGCSEEEESSTTCHHHHHHHHHHHHHH
T ss_pred cCeEEEEECCHHHHHHHHHHHHH-HcCCCHHHHHHHHHHhhhHhHHHhCCcchhcceEEEcCCCCccHHHHHHHHHHHHH
Confidence 37899999999999999999999 8999999999887 9999999888899999999999988
Q ss_pred hcc
Q 023344 63 LGQ 65 (283)
Q Consensus 63 l~~ 65 (283)
+++
T Consensus 233 ~~~ 235 (245)
T 2jeo_A 233 LNG 235 (245)
T ss_dssp HHT
T ss_pred Hhc
Confidence 865
No 51
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=98.17 E-value=7.2e-06 Score=72.09 Aligned_cols=88 Identities=11% Similarity=0.149 Sum_probs=59.8
Q ss_pred eEEEecccchHHHHHHHHhc--------cCceeeeEEEEecCCCCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHH
Q 023344 145 CGVSIVRSGESMENALRACC--------KGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQ 216 (283)
Q Consensus 145 ~~V~IlRaG~~m~~~l~~~~--------p~a~~G~i~i~R~~~t~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~ 216 (283)
+++.+..+|.++...+.+.+ .+.+...+--.|.. .+...+.. ...++|++|+|+||+++||+|+.++++
T Consensus 70 ~Vvg~~~~G~~~a~~lA~~L~~~~~~~~~~~p~~~~rk~~k~-~g~~~~~~--~~~i~Gk~VlIVDDvitTG~Tl~~a~~ 146 (226)
T 2ps1_A 70 VIFGPAYKGIPLAAIVCVKLAEIGGSKFQNIQYAFNRKEAKD-HGEGGIIV--GSALENKRILIIDDVMTAGTAINEAFE 146 (226)
T ss_dssp EEEECTTTHHHHHHHHHHHHHHHSTTTTTTCEEEEEEEEEES-STTCEEEE--ESCCTTCEEEEEEEEESSSHHHHHHHH
T ss_pred EEEEeccCCHHHHHHHHHHHHhhhccccCCCCEEEEechhhh-cCCCceEe--cCCCCcCEEEEEEecccChHHHHHHHH
Confidence 34667777888887776666 24444332222211 12111122 235789999999999999999999999
Q ss_pred HHHHcCCCCccEEEEEEeeCH
Q 023344 217 LLIEKGVPESHIIFLNLISAP 237 (283)
Q Consensus 217 ~L~~~G~~e~~I~~v~~vas~ 237 (283)
.|++.|+ +.+.+++++..+
T Consensus 147 ~L~~~Ga--~~v~v~~l~dr~ 165 (226)
T 2ps1_A 147 IISNAKG--QVVGSIIALDRQ 165 (226)
T ss_dssp HHHHTTC--EEEEEEEEEECC
T ss_pred HHHHcCC--eEEEEEEEEEcc
Confidence 9999998 667777777654
No 52
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*
Probab=98.11 E-value=3.2e-06 Score=69.80 Aligned_cols=86 Identities=14% Similarity=0.173 Sum_probs=59.6
Q ss_pred eEEEecccchHHHHHHHHhccCceeeeEEEEecC--CCCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcC
Q 023344 145 CGVSIVRSGESMENALRACCKGIKIGKILIHRDG--DNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKG 222 (283)
Q Consensus 145 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~--~t~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G 222 (283)
++|.+.++|..+...+.+.+.--.+..+...+.. .++... ..+-+ +++|++|+|+|++++||+|+.+|++.|++
T Consensus 31 ~vvgi~~Gg~~~a~~la~~l~~~~~~~i~~~~y~~~~~~~~~-~~~~~-~~~gk~VliVDDii~TG~Tl~~a~~~l~~-- 106 (152)
T 1nul_A 31 GIIAVSRGGLVPGALLARELGIRHVDTVCISSYDHDNQRELK-VLKRA-EGDGEGFIVIDDLVDTGGTAVAIREMYPK-- 106 (152)
T ss_dssp EEEEEETTTHHHHHHHHHHHTCCCEEEEEEEC--------CE-EEECC-SSCCTTEEEEEEEECTTSSHHHHHHHCTT--
T ss_pred EEEEEcCCCHHHHHHHHHHcCCCcceEEEEEEecCcccceEE-EecCC-CCCcCEEEEEEeecCchHHHHHHHHHHhh--
Confidence 5899999999999999888742235555433321 222111 12223 47899999999999999999999999875
Q ss_pred CCCccEEEEEEeeCHHH
Q 023344 223 VPESHIIFLNLISAPEG 239 (283)
Q Consensus 223 ~~e~~I~~v~~vas~~g 239 (283)
+.+++++--+.+
T Consensus 107 -----v~~a~L~~k~~~ 118 (152)
T 1nul_A 107 -----AHFVTIFAKPAG 118 (152)
T ss_dssp -----SEEEEEEECGGG
T ss_pred -----CCEEEEEECCCC
Confidence 667777776644
No 53
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=98.08 E-value=7.3e-06 Score=72.70 Aligned_cols=87 Identities=16% Similarity=0.185 Sum_probs=60.0
Q ss_pred eEEEecccchHHHHHHHHhcc-----CceeeeEEEEecCCC--CceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHH
Q 023344 145 CGVSIVRSGESMENALRACCK-----GIKIGKILIHRDGDN--GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQL 217 (283)
Q Consensus 145 ~~V~IlRaG~~m~~~l~~~~p-----~a~~G~i~i~R~~~t--~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~ 217 (283)
++|++..+|.++...+...+- +.+. +.+ |.+.+ +..-... ...++|++|+|+||+++||+|+.++++.
T Consensus 84 ~Ivg~~~gGi~~A~~lA~~L~~~~g~~~p~--~~~-RK~~k~~g~~~~i~--g~~~~Gk~VLIVDDVitTG~Tl~~a~~~ 158 (232)
T 3mjd_A 84 ILFGPAYKGIPLVAAISTVLALKYNIDMPY--AFD-RKEAKDHGEGGVFV--GADMTNKKVLLIDDVMTAGTAFYESYNK 158 (232)
T ss_dssp EEEECTTTHHHHHHHHHHHHHHHHCCCCBE--EEE-CCC-------CCEE--ESCCTTCEEEEECSCCSSSHHHHHHHHH
T ss_pred EEEEecCCcHHHHHHHHHHHhhhcCCCCcE--EEE-EeecccCCCCceEe--ccCCCCCEEEEEEeeccccHHHHHHHHH
Confidence 578888999999888877752 3443 333 33322 1110011 1246899999999999999999999999
Q ss_pred HHHcCCCCccEEEEEEeeCHH
Q 023344 218 LIEKGVPESHIIFLNLISAPE 238 (283)
Q Consensus 218 L~~~G~~e~~I~~v~~vas~~ 238 (283)
|++.|+ +-+-+++++--++
T Consensus 159 L~~~Ga--~vv~v~vlvdr~e 177 (232)
T 3mjd_A 159 LKIINA--KIAGVVLSIDRQE 177 (232)
T ss_dssp HHTTTC--EEEEEEEEEECCB
T ss_pred HHHCCC--EEEEEEEEEECCc
Confidence 999998 5666777776443
No 54
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=98.07 E-value=2.1e-05 Score=70.00 Aligned_cols=104 Identities=13% Similarity=0.164 Sum_probs=67.6
Q ss_pred eEEEecccchHHHHHHHHhcc---CceeeeEEEEecCCCC--ceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHH
Q 023344 145 CGVSIVRSGESMENALRACCK---GIKIGKILIHRDGDNG--KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLI 219 (283)
Q Consensus 145 ~~V~IlRaG~~m~~~l~~~~p---~a~~G~i~i~R~~~t~--~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~ 219 (283)
+++++-.+|.++...+...+- ...+..+.+ |.+.+. ..-... ...++| +|+|+||+++||+|+.++++.|+
T Consensus 91 ~Vvg~~~gGi~~A~~lA~~L~~~~g~~vp~~~~-RK~~k~~g~~~~i~--G~~~~G-~VliVDDvitTG~T~~~a~~~l~ 166 (238)
T 3n2l_A 91 VLFGPAYKGIPIATTTAVALADHHDVDTPYCFN-RKEAKNHGEGGNLV--GSKLEG-RVMLVDDVITAGTAIRESMELIQ 166 (238)
T ss_dssp EEEECTTTHHHHHHHHHHHHHHHSCCCCBEEEE-CCC--------CEE--ESCCCS-EEEEECSCCSSSHHHHHHHHHHH
T ss_pred EEEecccChHHHHHHHHHHHhHhhCCCccEEEE-eeccCCCCCCceEe--ccccCC-cEEEEeeeecccHHHHHHHHHHH
Confidence 578888899999888776651 122333333 433321 110011 134679 99999999999999999999999
Q ss_pred HcCCCCccEEEEEEeeCH-------HHHHHHHHhCCCcEEEEE
Q 023344 220 EKGVPESHIIFLNLISAP-------EGIHCVCKRFPSLKIVTS 255 (283)
Q Consensus 220 ~~G~~e~~I~~v~~vas~-------~gl~~l~~~~P~v~I~ta 255 (283)
+.|+ +-+-+++++.-+ .|++++.+.+ .+++++.
T Consensus 167 ~~Ga--~vv~v~vlvdr~egG~~~l~a~~~~~~~~-Gv~v~SL 206 (238)
T 3n2l_A 167 ANKA--DLAGVLVAIDRQEKGKGELSAIQEVERDF-GCAVISI 206 (238)
T ss_dssp HTTC--EEEEEEEEEECCCBCSSSSBHHHHHHHHH-CCEEEEE
T ss_pred HcCC--EEEEEEEEEEcccCccchhhHHHHHHHHc-CCCEEEE
Confidence 9998 456666677643 3677774444 5666654
No 55
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=97.90 E-value=1.4e-05 Score=69.60 Aligned_cols=86 Identities=13% Similarity=0.197 Sum_probs=59.8
Q ss_pred eEEEecccchHHHHHHHHhc----c-CceeeeEEEEecCCC--CceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHH
Q 023344 145 CGVSIVRSGESMENALRACC----K-GIKIGKILIHRDGDN--GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQL 217 (283)
Q Consensus 145 ~~V~IlRaG~~m~~~l~~~~----p-~a~~G~i~i~R~~~t--~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~ 217 (283)
++|++..+|.++...+.+.+ . +.+. +.+ |.+.+ +..-.... ..++| +|+|+||+++||+|+.++++.
T Consensus 66 ~Ivgv~~~G~~~a~~lA~~L~~~~~~~~~~--~~~-rk~~~~~~~~~~~~g--~~~~g-~VliVDDvitTG~Tl~~a~~~ 139 (213)
T 1lh0_A 66 LLFGPAYKGIPIATTTAVALAEHHDKDLPY--CFN-RKEAKDHGEGGSLVG--SALQG-RVMLVDDVITAGTAIRESMEI 139 (213)
T ss_dssp EEECCTTTHHHHHHHHHHHHHHHHCCCCBE--EEE-CSSCCSSTTCSSEEE--SCCCS-EEEEECSCCSSSCHHHHHHHH
T ss_pred EEEEcCCCcHHHHHHHHHHHHHhhCCCCCE--EEE-EeccCccCCCCceeC--CCCCC-CEEEEEecccchHHHHHHHHH
Confidence 57888888999888777766 2 3332 333 33222 11100111 24679 999999999999999999999
Q ss_pred HHHcCCCCccEEEEEEeeCHH
Q 023344 218 LIEKGVPESHIIFLNLISAPE 238 (283)
Q Consensus 218 L~~~G~~e~~I~~v~~vas~~ 238 (283)
|++.|+ +.+.+++++--++
T Consensus 140 l~~~Ga--~~v~v~~l~dr~~ 158 (213)
T 1lh0_A 140 IQAHGA--TLAGVLISLDRQE 158 (213)
T ss_dssp HHHTTC--EEEEEEEEEECCB
T ss_pred HHHCCC--eEEEEEEEEEccc
Confidence 999998 6777777776553
No 56
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=97.88 E-value=2.3e-05 Score=71.68 Aligned_cols=90 Identities=18% Similarity=0.227 Sum_probs=59.7
Q ss_pred eEEEecccchHHHHHHHHhccCceeeeEEEEecCCC--C--------------ceeEeccCCCCCCCcEEEEEcCcccch
Q 023344 145 CGVSIVRSGESMENALRACCKGIKIGKILIHRDGDN--G--------------KQLIYEKLPNDISERHVLLLDPVLATG 208 (283)
Q Consensus 145 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t--~--------------~~~~y~~lP~~i~~~~Vil~Dp~iaTG 208 (283)
++|++-..|.++...+.+.+. .+. +.+.+.... + ...++..-....+|++|+|+||+++||
T Consensus 133 ~Iv~V~~rG~~~A~~lA~~L~-vp~--v~~rk~~~~t~~~~~~~~~~~g~~~~~~~~~l~~~~l~~Gk~VLIVDDViTTG 209 (291)
T 1o57_A 133 VVMTVATKGIPLAYAAASYLN-VPV--VIVRKDNKVTEGSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAG 209 (291)
T ss_dssp EEEEETTTTHHHHHHHHHHHT-CCE--EEEBCC-----CCEEEEEEECSSCCSEEEEEEEGGGSCTTCEEEEEEEEESSS
T ss_pred EEEEECCCCHHHHHHHHHHhC-CCE--EEEEEeccCCCCceeeeeeecccccceeeEEEecccCCCcCEEEEEEEEcCcH
Confidence 466777888888877776652 232 222222111 1 011111112235799999999999999
Q ss_pred HHHHHHHHHHHHcCCCCccEEEEEEeeCHHH
Q 023344 209 NSANQAIQLLIEKGVPESHIIFLNLISAPEG 239 (283)
Q Consensus 209 ~t~~~ai~~L~~~G~~e~~I~~v~~vas~~g 239 (283)
+|+.++++.|++.|+ +.+.+++++..+++
T Consensus 210 ~Tl~~a~~~L~~aGA--~vV~v~vlvdr~~~ 238 (291)
T 1o57_A 210 GTINGMINLLDEFNA--NVAGIGVLVEAEGV 238 (291)
T ss_dssp HHHHHHHHHTGGGTC--EEEEEEEEEEESSC
T ss_pred HHHHHHHHHHHHCCC--EEEEEEEEEEcCcc
Confidence 999999999999998 66777777776666
No 57
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=97.76 E-value=5e-05 Score=74.32 Aligned_cols=87 Identities=13% Similarity=0.151 Sum_probs=59.9
Q ss_pred eeEEEecccchHHHHHHHHhccCceeeeEEEE-ecC-CCC--c-------e--eEeccCCCCCCCcEEEEEcCcccchHH
Q 023344 144 LCGVSIVRSGESMENALRACCKGIKIGKILIH-RDG-DNG--K-------Q--LIYEKLPNDISERHVLLLDPVLATGNS 210 (283)
Q Consensus 144 i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~-R~~-~t~--~-------~--~~y~~lP~~i~~~~Vil~Dp~iaTG~t 210 (283)
-++|++..+|.++..++.+.+. .+.....++ |.. .+. + . ..+..++.+++||+|+|+||++.||+|
T Consensus 296 dvVv~vP~~g~~~A~~la~~lg-~p~~~~~~k~r~~~~t~i~~~~~~R~~~v~~~~~~~~~~v~Gk~VllVDDii~TG~T 374 (504)
T 1ecf_A 296 DVVIPIPETSCDIALEIARILG-KPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTT 374 (504)
T ss_dssp CEEEECTTTTHHHHHHHHHHHT-CCBCCCEEECSCCCCCCCCSSSCCCCCCSTTTEEECGGGTTTCCEEEEESCCSSSHH
T ss_pred eEEEEECCcHHHHHHHHHHHhC-CCceeeEEEecccCCceeCccHHHHHHHHHhhhccccccCCCCeEEEEeccccccHH
Confidence 4688999999999988887763 222111222 211 110 0 0 112223557899999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEEEEE
Q 023344 211 ANQAIQLLIEKGVPESHIIFLNL 233 (283)
Q Consensus 211 ~~~ai~~L~~~G~~e~~I~~v~~ 233 (283)
+.++++.|++.|+ +.|.++++
T Consensus 375 l~~~~~~L~~~Ga--~~V~~~~l 395 (504)
T 1ecf_A 375 SEQIIEMAREAGA--KKVYLASA 395 (504)
T ss_dssp HHHHHHHHHHTTC--SSEEEEES
T ss_pred HHHHHHHHHhcCC--cEEEEEEE
Confidence 9999999999998 67777664
No 58
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=97.67 E-value=3.3e-05 Score=74.70 Aligned_cols=84 Identities=12% Similarity=0.173 Sum_probs=56.7
Q ss_pred eEEEecccchHHHHHHHHhccCceeeeEEEEecCCCC--------------ceeEeccCCCCCCCcEEEEEcCcccchHH
Q 023344 145 CGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNG--------------KQLIYEKLPNDISERHVLLLDPVLATGNS 210 (283)
Q Consensus 145 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t~--------------~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t 210 (283)
++||+..+|..+..++.+.+. .+.... +.|...++ ....+.....+++||+|+|+||++.||+|
T Consensus 276 vVV~VP~~g~~~A~~la~~lg-~p~~~~-l~k~r~~~~~~~~~~~~~R~~~~~~~~~~~~~~v~gk~VlLVDDvitTG~T 353 (459)
T 1ao0_A 276 VVTGVPDSSISAAIGYAEATG-IPYELG-LIKNRYVGRTFIQPSQALREQGVRMKLSAVRGVVEGKRVVMVDDSIVRGTT 353 (459)
T ss_dssp EEECCTTTTHHHHHHHHHHHC-CCBCCC-EEECTTCCTTSCCCCHHHHHHTCCSSEEECHHHHTTCEEEEEESCCSSSHH
T ss_pred EEEEECCcHHHHHHHHHHHhC-CCCcee-EEEecCCCccccCCCHHHHHhhhhhhcccccccCCCCeEEEEeeeecCHHH
Confidence 577888888888888776553 233222 22322110 01111112346789999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEEEE
Q 023344 211 ANQAIQLLIEKGVPESHIIFLN 232 (283)
Q Consensus 211 ~~~ai~~L~~~G~~e~~I~~v~ 232 (283)
+.++++.|++.|+ ++|.+++
T Consensus 354 l~~a~~~L~~~Ga--~~V~~~~ 373 (459)
T 1ao0_A 354 SRRIVTMLREAGA--TEVHVKI 373 (459)
T ss_dssp HHHHHHHHHHTTC--SEEEEEE
T ss_pred HHHHHHHHHHcCC--CEEEEEE
Confidence 9999999999998 5677666
No 59
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=97.64 E-value=2.1e-05 Score=71.58 Aligned_cols=37 Identities=24% Similarity=0.362 Sum_probs=34.6
Q ss_pred CCeEEEEeCCchhHHHHhhhhccccCCCCHHHHHHHh
Q 023344 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQY 37 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~~qy 37 (283)
+|++|||++|.++|+.||+.||..+||++.++++++|
T Consensus 148 ~D~~IfV~a~~~~rl~Rrl~Rd~~~RG~s~e~v~~~i 184 (290)
T 1a7j_A 148 ADLKIGVVPVINLEWIQKIHRDRATRGYTTEAVTDVI 184 (290)
T ss_dssp CSEEEEEEECHHHHHHHHHHHTSSSCCSCCCCHHHHH
T ss_pred CCEEEEEECCHHHHHHHHhhhhhhhcCCChHHHHHHH
Confidence 5899999999999999999999999999999888766
No 60
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=97.60 E-value=6.1e-05 Score=66.31 Aligned_cols=65 Identities=66% Similarity=1.024 Sum_probs=55.2
Q ss_pred CCeEEEEeCCchhHHHHhhhhccccCCCCHHHHHHHh------------------hhccccCCCCchHHHHHHHHHHhhh
Q 023344 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQY------------------ADVIIPRGGDNHVAIDLIVQHIHTK 62 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~~qy------------------aD~iip~~~~~~~a~~~i~~~i~~~ 62 (283)
+|++||+++|.++++.|+..||..+||++.+.+.++| ||++||+.-+|+..++.+.++|.+.
T Consensus 151 ~d~vi~l~~~~e~~~~R~~~R~~~~rg~~~e~i~~~~~~~~~~~~~~~i~~~~~~ad~vI~~~id~~~s~e~v~~~I~~~ 230 (252)
T 1uj2_A 151 FQMKLFVDTDADTRLSRRVLRDISERGRDLEQILSQYITFVKPAFEEFCLPTKKYADVIIPRGADNLVAINLIVQHIQDI 230 (252)
T ss_dssp CSEEEEEECCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHTHHHHHHHHTGGGGGGCSEEEETGGGCHHHHHHHHHHHHHH
T ss_pred cCeeEEEeCCHHHHHHHHHHHHHhhhCCCHHHHHHHHHHhccHHHHHHhhhhhhcCcEEEecCCCChhHHHHHHHHHHHH
Confidence 4789999999999999999999888999998876543 8999976666677888888888888
Q ss_pred hcc
Q 023344 63 LGQ 65 (283)
Q Consensus 63 l~~ 65 (283)
+.+
T Consensus 231 l~~ 233 (252)
T 1uj2_A 231 LNG 233 (252)
T ss_dssp HHC
T ss_pred Hcc
Confidence 764
No 61
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=97.23 E-value=0.00069 Score=65.48 Aligned_cols=100 Identities=15% Similarity=0.187 Sum_probs=65.5
Q ss_pred eEEEecccchHHHHHHHHhccCceeeeEEEEecCCC--CceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcC
Q 023344 145 CGVSIVRSGESMENALRACCKGIKIGKILIHRDGDN--GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKG 222 (283)
Q Consensus 145 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t--~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G 222 (283)
++|++..+|.++...+.+.+. .+ .+.+ |.+.+ +..-.... ...+|++|+|+||+++||+|+..+++.|++.|
T Consensus 319 ~Ivg~~~gGi~~A~~lA~~L~-~p--~~~~-rk~~k~~g~~~~i~g--~~~~G~~VliVDDvitTG~T~~~~~~~l~~~g 392 (453)
T 3qw4_B 319 RIAGLPYAALPIASAISNEMN-VP--LIYP-RREAKIYGTKAAIEG--EYKKGDRVVIIDDLVSTGETKVEAIEKLRSAG 392 (453)
T ss_dssp EEEECTTTTHHHHHHHHHHHC-CC--EEEE-SSCC-------CEES--CCCTTCEEEEEEEEECC-CCHHHHHHHHHTTT
T ss_pred EEEeccCCcHHHHHHHHHHhC-CC--EEEE-EeeccccCcCceEec--ccCCCCEEEEEeeeechhHHHHHHHHHHHHcC
Confidence 688889999999888877652 22 2333 33321 11111111 12479999999999999999999999999999
Q ss_pred CCCccEEEEEEeeCHH-HHHHHHHhCCCcEEEE
Q 023344 223 VPESHIIFLNLISAPE-GIHCVCKRFPSLKIVT 254 (283)
Q Consensus 223 ~~e~~I~~v~~vas~~-gl~~l~~~~P~v~I~t 254 (283)
+ +.+.+++++.-.+ |-+++.+. ++++++
T Consensus 393 ~--~vv~v~~lvdr~~~g~~~l~~~--g~~v~s 421 (453)
T 3qw4_B 393 L--EVVSIVVLVDRDMGAKAFLNKL--GYDFEA 421 (453)
T ss_dssp C--EEEEEEEEEECSSSHHHHHHHT--TCCEEE
T ss_pred C--EEEEEEEEEECCcchHHHHHhc--CCCEEE
Confidence 8 5677777776544 56666542 344443
No 62
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=97.12 E-value=0.00054 Score=57.84 Aligned_cols=60 Identities=18% Similarity=0.267 Sum_probs=43.6
Q ss_pred CCeEEEEeCCchhHHHHhhhhccccCCCCHHHHHHHh------------hhccccCCCCchHHHHHHHHHHhhhhc
Q 023344 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQY------------ADVIIPRGGDNHVAIDLIVQHIHTKLG 64 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~~qy------------aD~iip~~~~~~~a~~~i~~~i~~~l~ 64 (283)
+|..||+++|.++++.|...|| |++.+++.+.+ ||++|++++...++++.+.++|.+.+.
T Consensus 124 ~d~vi~l~~~~e~~~~Rl~~R~----~~~~e~~~~r~~~q~~~~~~~~~ad~vIdn~~~~~~~~~~~~~~i~~~~~ 195 (206)
T 1jjv_A 124 CDRILVVDVSPQTQLARSAQRD----NNNFEQIQRIMNSQVSQQERLKWADDVINNDAELAQNLPHLQQKVLELHQ 195 (206)
T ss_dssp CSEEEEEECCHHHHHHHHC---------CHHHHHHHHHHSCCHHHHHHHCSEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHcC----CCCHHHHHHHHHhcCChHHHHHhCCEEEECCCCccccHHHHHHHHHHHHH
Confidence 4789999999999999999886 67777666544 999999987666666677777766654
No 63
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=96.69 E-value=0.0023 Score=57.44 Aligned_cols=56 Identities=14% Similarity=0.172 Sum_probs=41.5
Q ss_pred CCeEEEEeCCchhHHHHhhhhccccCCCCHHHHHHHh------------hhccccCCCCchHHHHHHHHHHh
Q 023344 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQY------------ADVIIPRGGDNHVAIDLIVQHIH 60 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~~qy------------aD~iip~~~~~~~a~~~i~~~i~ 60 (283)
+|+.|||++|.++++.|+..|| |++.+.+.+++ ||++|+++.......+.|.+.+.
T Consensus 200 ~d~vI~l~a~~ev~~~Rl~~R~----g~s~e~~~~ri~~q~~~~~~~~~AD~vIdn~~s~eel~~~I~~~l~ 267 (281)
T 2f6r_A 200 VHEVWTVVIPETEAVRRIVERD----GLSEAAAQSRLQSQMSGQQLVEQSNVVLSTLWESHVTQSQVEKAWN 267 (281)
T ss_dssp CSEEEEEECCHHHHHHHHHHHH----CCCHHHHHHHHHTSCCHHHHHHTCSEEEECSSCHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCHHHHHHHHHHcC----CCCHHHHHHHHHHcCChHhhHhhCCEEEECCCCHHHHHHHHHHHHH
Confidence 4789999999999999999987 77888776554 89999887544434444444333
No 64
>4i1u_A Dephospho-COA kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.05A {Burkholderia vietnamiensis} PDB: 4i1v_A*
Probab=96.63 E-value=0.0031 Score=54.86 Aligned_cols=43 Identities=26% Similarity=0.354 Sum_probs=37.4
Q ss_pred CCeEEEEeCCchhHHHHhhhhccccCCCCHHHHHHHh------------hhccccCC-CC
Q 023344 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQY------------ADVIIPRG-GD 47 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~~qy------------aD~iip~~-~~ 47 (283)
+|..|||++|.++|+.|.+.|| |.|.+++...+ ||+||.|+ +.
T Consensus 132 ~D~vi~V~ap~e~r~~Rl~~Rd----g~s~eea~~ri~~Q~~~eek~~~AD~VIdN~~gs 187 (210)
T 4i1u_A 132 CDRVLVVDCPVDTQIARVMQRN----GFTREQVEAIIARQATREARLAAADDVIVNDAAT 187 (210)
T ss_dssp CSEEEEEECCHHHHHHHHHHHH----CCCHHHHHHHHHHSCCHHHHHHTCSEEEECSSCC
T ss_pred CCeEEEEECCHHHHHHHHHhcC----CCCHHHHHHHHHHcCChHHHHHhCCEEEECCCCC
Confidence 5899999999999999999998 78888877544 99999987 54
No 65
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii}
Probab=96.32 E-value=0.00055 Score=63.26 Aligned_cols=40 Identities=23% Similarity=0.263 Sum_probs=36.6
Q ss_pred CCeEEEEeCCchhHHHHhhhhccccCC---CCHHHHHHHhhhc
Q 023344 1 MNMKIFVDTDADVRLARRIRRDTVERG---RDVDSVLEQYADV 40 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~rd~~~rg---r~~~~v~~qyaD~ 40 (283)
+|.+|||++|.|+|+.|++.||..+|| ++++++.+||+.+
T Consensus 227 ~D~~I~Vda~~d~~~~R~i~Rd~~~r~~a~~~~~s~~~~y~~~ 269 (321)
T 3tqc_A 227 FDFSLFVDAQAQVIQKWYIDRVLSFWRTTFKDPHSYFHYLTQM 269 (321)
T ss_dssp CSEEEEEECCHHHHHHHHHHHHHHHHHTGGGSTTSTTGGGGGS
T ss_pred cCeEEEEECCHHHHHHHHHHhcchhhhhhccChHHHHHHHhcC
Confidence 589999999999999999999999998 7889999999654
No 66
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=96.31 E-value=0.006 Score=48.84 Aligned_cols=60 Identities=15% Similarity=0.198 Sum_probs=41.5
Q ss_pred CeEEEEeCCchhHHHHhhhhccccCCCCHHHHHHHh--------------hhccccCCCCchHHHHHHHHHHhh
Q 023344 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQY--------------ADVIIPRGGDNHVAIDLIVQHIHT 61 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~~qy--------------aD~iip~~~~~~~a~~~i~~~i~~ 61 (283)
++.||+++|.++++.|...|+-.+++.+.+.+.+++ ||++|.++.......+.|.+.+.+
T Consensus 103 ~~~i~l~~~~~~~~~R~~~R~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ad~vId~~~~~~~~~~~i~~~l~~ 176 (179)
T 3lw7_A 103 VYIVAVHSPPKIRYKRMIERLRSDDSKEISELIRRDREELKLGIGEVIAMADYIITNDSNYEEFKRRCEEVTDR 176 (179)
T ss_dssp EEEEEEECCHHHHHHHHHTCC----CCCHHHHHHHHHHHHHHTHHHHHHTCSEEEECCSCHHHHHHHHHHHHHH
T ss_pred cEEEEEECCHHHHHHHHHhccCCCCcchHHHHHHHHHhhhccChHhHHHhCCEEEECCCCHHHHHHHHHHHHHH
Confidence 368999999999999999998766778888877653 899999776444344444444443
No 67
>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase, transferase; NMR {Streptococcus pneumoniae} SCOP: c.37.1.1
Probab=95.66 E-value=0.018 Score=49.66 Aligned_cols=34 Identities=26% Similarity=0.581 Sum_probs=26.2
Q ss_pred CCeEEEEeCCchhHHHHhhhhccccCCC--CHHHHHH
Q 023344 1 MNMKIFVDTDADVRLARRIRRDTVERGR--DVDSVLE 35 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~rd~~~rgr--~~~~v~~ 35 (283)
.|++||+++|.++++.|++.|+ .+||+ +.+++.+
T Consensus 153 ~d~vi~L~a~~e~~~~R~~~~~-~~R~~~~~~e~~~~ 188 (236)
T 1q3t_A 153 AELKIFLVASVDERAERRYKEN-IAKGIETDLETLKK 188 (236)
T ss_dssp CSEEEEEECCHHHHHHHHHHHH-HHTTCCCCHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHH-HhcCCCCCHHHHHH
Confidence 3789999999999999988775 45775 6665543
No 68
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=95.45 E-value=0.01 Score=50.27 Aligned_cols=42 Identities=14% Similarity=0.147 Sum_probs=35.8
Q ss_pred CCeEEEEeCCchhHHHHhhhhccccCCCCHHHHHHHhhhcccc
Q 023344 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYADVIIP 43 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~~qyaD~iip 43 (283)
+|.+||||++.++|+.|++.|+. ++|++.+++.++|...-.|
T Consensus 148 ~d~~i~vd~~~~~~~~R~~~R~~-~~g~t~~~~~~~~~~~~~~ 189 (208)
T 3c8u_A 148 WDVSIRLEVPMADLEARLVQRWL-DHGLNHDAAVARAQGNDLA 189 (208)
T ss_dssp CSEEEEECCCHHHHHHHHHHHHH-HTTCCHHHHHHHHHTHHHH
T ss_pred cCEEEEEeCCHHHHHHHHHHHHH-hcCCCHHHHHHHHHhccHH
Confidence 58899999999999999999974 7999999999998543333
No 69
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=95.35 E-value=0.031 Score=46.64 Aligned_cols=56 Identities=21% Similarity=0.337 Sum_probs=39.8
Q ss_pred CCeEEEEeCCchhHHHHhhhhccccCCCCHHHHHHHh------------hhccccCCCCchHHHHHHHHHHhhhhcc
Q 023344 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQY------------ADVIIPRGGDNHVAIDLIVQHIHTKLGQ 65 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~~qy------------aD~iip~~~~~~~a~~~i~~~i~~~l~~ 65 (283)
.|..||+++|.++++.|...| |.+.+++.+.+ ||++|+++.. ++.+.+.|.+.+.+
T Consensus 124 ~~~~i~l~~~~e~~~~Rl~~R-----~~~~~~~~~~~~~~~~~~~~~~~ad~vId~~~~----~~~~~~~i~~~l~~ 191 (204)
T 2if2_A 124 YDKLIVVYAPYEVCKERAIKR-----GMSEEDFERRWKKQMPIEEKVKYADYVIDNSGS----IEETYKQVKKVYEE 191 (204)
T ss_dssp SSEEEEECCCHHHHHHHHHHT-----CCCHHHHHHHHTTSCCHHHHGGGCSEECCCSSC----HHHHHHHHHHHHHT
T ss_pred CCEEEEEECCHHHHHHHHHHc-----CCCHHHHHHHHHhCCChhHHHhcCCEEEECCCC----HHHHHHHHHHHHHH
Confidence 378999999999999888765 66666655443 8999987633 44555666655544
No 70
>2ga8_A Hypothetical 39.9 kDa protein; YFR007W, YFH7, unknown function; HET: CME; 1.77A {Saccharomyces cerevisiae} PDB: 2gaa_A*
Probab=95.23 E-value=0.0094 Score=55.90 Aligned_cols=41 Identities=15% Similarity=0.191 Sum_probs=36.9
Q ss_pred eEEEEeCCchhHHHHhhhhccccCCC--CHHHHHHHhhhccccC
Q 023344 3 MKIFVDTDADVRLARRIRRDTVERGR--DVDSVLEQYADVIIPR 44 (283)
Q Consensus 3 ~~ifv~~~~d~~l~rr~~rd~~~rgr--~~~~v~~qyaD~iip~ 44 (283)
+++|||+|.++++.|++.||+ ++|+ |.++++.+|+....||
T Consensus 291 ~~i~Vdad~ev~~~Rli~R~~-~~Gl~~s~eea~~r~~~~d~pN 333 (359)
T 2ga8_A 291 LVYKIDIDYEATEERVAKRHL-QSGLVTTIAEGREKFRSNDLLN 333 (359)
T ss_dssp EEEEEECCHHHHHHHHHHHHH-HTTSCSSHHHHHHHHHHCTTTS
T ss_pred EEEEEECCHHHHHHHHHHhhh-ccCCCCCHHHHHHHHHhcCchh
Confidence 899999999999999999998 5899 9999999997665664
No 71
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=95.12 E-value=0.028 Score=46.48 Aligned_cols=54 Identities=19% Similarity=0.339 Sum_probs=36.0
Q ss_pred CeEEEEeCCchhHHHHhhhhccccCCCCHHHHHH------------HhhhccccCCCCchHHHHHHHHHHhhhh
Q 023344 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLE------------QYADVIIPRGGDNHVAIDLIVQHIHTKL 63 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~~------------qyaD~iip~~~~~~~a~~~i~~~i~~~l 63 (283)
|..||+++|.++++.|...|+ |.+.+.+.. ++||++|+++.. ++.+.+.|.+.+
T Consensus 126 d~~i~l~~~~e~~~~R~~~R~----~~~~~~~~~~i~~~~~~~~~~~~ad~vId~~~~----~~~~~~~i~~~~ 191 (203)
T 1uf9_A 126 HGTLLVAAPLEERVRRVMARS----GLSREEVLARERAQMPEEEKRKRATWVLENTGS----LEDLERALKAVL 191 (203)
T ss_dssp SEEEEECCCHHHHHHHHHTTT----CCTTHHHHHHHTTSCCHHHHHHHCSEEECCSSH----HHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHcC----CCCHHHHHHHHHHCCChhHHHHhCCEEEECCCC----HHHHHHHHHHHH
Confidence 789999999999999988875 334333332 228999987653 344444444444
No 72
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A
Probab=95.12 E-value=0.031 Score=47.25 Aligned_cols=59 Identities=22% Similarity=0.282 Sum_probs=41.1
Q ss_pred CCeEEEEeCCchhHHHHhhhhccccCCCCHHHHHHHh------------hhccccCCCCchHHHHHHHHHHhhhh
Q 023344 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQY------------ADVIIPRGGDNHVAIDLIVQHIHTKL 63 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~~qy------------aD~iip~~~~~~~a~~~i~~~i~~~l 63 (283)
.|+.||+++|.++++.|...|+ |.+.+.+.+.+ ||++|+++.......+.|.+.+...+
T Consensus 126 ~d~vi~l~~~~e~~~~Rl~~R~----~~~~~~~~~~~~~~~~~~~~~~~ad~vId~~~~~~~~~~~I~~~l~~~~ 196 (218)
T 1vht_A 126 ANRVLVVDVSPETQLKRTMQRD----DVTREHVEQILAAQATREARLAVADDVIDNNGAPDAIASDVARLHAHYL 196 (218)
T ss_dssp CSEEEEEECCHHHHHHHHHHHH----TCCHHHHHHHHHHSCCHHHHHHHCSEEEECSSCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHcC----CCCHHHHHHHHHhcCChHHHHHhCCEEEECCCCHHHHHHHHHHHHHHHH
Confidence 4789999999999999888775 45555544322 89999987654445555555555444
No 73
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=94.96 E-value=0.0087 Score=54.19 Aligned_cols=41 Identities=20% Similarity=0.353 Sum_probs=34.3
Q ss_pred CeEEEEeCCchhHHHH-hhhh--c-cccC--CCCHHHHHHHhhhcccc
Q 023344 2 NMKIFVDTDADVRLAR-RIRR--D-TVER--GRDVDSVLEQYADVIIP 43 (283)
Q Consensus 2 d~~ifv~~~~d~~l~r-r~~r--d-~~~r--gr~~~~v~~qyaD~iip 43 (283)
|++|||++|.+.++.| |++| | ..+| |++.+++ .+|++-+.|
T Consensus 204 d~~I~vd~~~~~~i~rWRi~re~~l~~~r~~g~s~e~v-~~~~~~~~p 250 (290)
T 1odf_A 204 SLGIVFTTDNINNVYGWRLQQEHELISKVGKGMTDEQV-HAFVDRYMP 250 (290)
T ss_dssp EEEEEEEESCTTHHHHHHHHHHHHHHHHHSCSCCHHHH-HHHHHTTHH
T ss_pred cceEEEECCCHHHHHHHHHHHHHHHHHhccCCCCHHHH-HHHHHHhcc
Confidence 3449999999999999 8999 7 4457 9999996 788887776
No 74
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis}
Probab=94.71 E-value=0.048 Score=47.76 Aligned_cols=62 Identities=19% Similarity=0.270 Sum_probs=40.1
Q ss_pred CeEEEEeCCchhHHHHhhhhcccc-CCCCHHHHHHHh------------------hh-ccccCCCC-chHHHHHHHHHHh
Q 023344 2 NMKIFVDTDADVRLARRIRRDTVE-RGRDVDSVLEQY------------------AD-VIIPRGGD-NHVAIDLIVQHIH 60 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~~~-rgr~~~~v~~qy------------------aD-~iip~~~~-~~~a~~~i~~~i~ 60 (283)
|++||++++.++|..||..+.... .+.+.+.+.+++ || ++|.++.. .+..++.|.+.++
T Consensus 164 ~~~ifl~A~~e~r~~R~~~~l~~~~~~~~~~~~~~~i~~rd~~~~~r~~~pl~~~~d~~~Idts~~~~eev~~~I~~~i~ 243 (252)
T 4e22_A 164 PVKIFLDASSQERAHRRMLQLQERGFNVNFERLLAEIQERDNRDRNRSVAPLVPAADALVLDSTSMSIEQVIEQALAYAQ 243 (252)
T ss_dssp SEEEEEECCHHHHHHHHHHHHHHHTCCCCHHHHHHHHC------------CCCCCTTEEEEECSSSCHHHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhhhccccchhccCCeEEEECcCCCHHHHHHHHHHHHH
Confidence 789999999999999987643221 244666666543 55 88887653 3334555555555
Q ss_pred hhh
Q 023344 61 TKL 63 (283)
Q Consensus 61 ~~l 63 (283)
+.+
T Consensus 244 ~~~ 246 (252)
T 4e22_A 244 RIL 246 (252)
T ss_dssp HHC
T ss_pred HHh
Confidence 443
No 75
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A*
Probab=94.64 E-value=0.05 Score=45.97 Aligned_cols=32 Identities=25% Similarity=0.476 Sum_probs=24.5
Q ss_pred CCeEEEEeCCchhHHHHhhhhccccCCC--CHHHH
Q 023344 1 MNMKIFVDTDADVRLARRIRRDTVERGR--DVDSV 33 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~rd~~~rgr--~~~~v 33 (283)
.|++||++++.++++.||..+ ..+||+ +.+++
T Consensus 141 ~d~~i~l~~~~e~~~~R~~~~-l~~rg~~~~~~~~ 174 (227)
T 1cke_A 141 APVKIFLDASSEERAHRRMLQ-LQVKGFSVNFERL 174 (227)
T ss_dssp CSEEEEEECCHHHHHHHHHHH-HHHHTCCCCHHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHH-HHhCCccCCHHHH
Confidence 378999999999999997654 346777 65655
No 76
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=93.97 E-value=0.032 Score=50.53 Aligned_cols=37 Identities=30% Similarity=0.353 Sum_probs=28.8
Q ss_pred CCeEEEEeCCchhHHHHhhhhccccC---CCCHHHHHHHh
Q 023344 1 MNMKIFVDTDADVRLARRIRRDTVER---GRDVDSVLEQY 37 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~rd~~~r---gr~~~~v~~qy 37 (283)
+|.+|||++|.++++.|++.||...| +|+++++.++|
T Consensus 215 ~D~~i~V~~~~~~~~~R~~~R~~~~r~~~~r~~~~~~~~~ 254 (308)
T 1sq5_A 215 VDFSIYVDAPEDLLQTWYINRFLKFREGAFTDPDSYFHNY 254 (308)
T ss_dssp CSEEEEEECCHHHHHHHHHHHHHHHHHTTTTCTTSTTHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHHHHHHhhccCCchhhhcc
Confidence 58999999999999999999997542 34555555555
No 77
>2h92_A Cytidylate kinase; rossmann fold, transferase; HET: C5P PG4; 2.30A {Staphylococcus aureus}
Probab=93.86 E-value=0.1 Score=43.87 Aligned_cols=32 Identities=19% Similarity=0.447 Sum_probs=25.0
Q ss_pred CeEEEEeCCchhHHHHhhhhccccCCC--CHHHHH
Q 023344 2 NMKIFVDTDADVRLARRIRRDTVERGR--DVDSVL 34 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~~~rgr--~~~~v~ 34 (283)
|++||+++|.++++.|++.+. ..||+ +.+.+.
T Consensus 137 ~~vi~l~a~~e~~~~R~~~~~-~~r~~~~~~e~~~ 170 (219)
T 2h92_A 137 DLKVYMIASVEERAERRYKDN-QLRGIESNFEDLK 170 (219)
T ss_dssp SEEEEEECCHHHHHHHHHHHH-HHTTCCCCHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHH-HhcCcccCHHHHH
Confidence 689999999999999987663 35776 666654
No 78
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A*
Probab=93.62 E-value=0.13 Score=42.51 Aligned_cols=42 Identities=26% Similarity=0.510 Sum_probs=30.4
Q ss_pred CCeEEEEeCCchhHHHHhhhhccccCCCCHHHHHHH--------------hhh-ccccCCC
Q 023344 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQ--------------YAD-VIIPRGG 46 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~~q--------------yaD-~iip~~~ 46 (283)
.|++||+++|.++++.|+..|+. .+.+++.+. +|| ++|.++.
T Consensus 136 ~d~~i~l~a~~e~~~~R~~~r~~----~~~~~~~~~~~~R~~~~~~~~~~~ad~~~Id~~~ 192 (208)
T 3ake_A 136 AAHKFYLTASPEVRAWRRARERP----QAYEEVLRDLLRRDERDKAQSAPAPDALVLDTGG 192 (208)
T ss_dssp CSEEEEEECCHHHHHHHHHHTSS----SCHHHHHHHHHHHHHTC--CCCCCTTCEEEETTT
T ss_pred CcEEEEEECCHHHHHHHHHhhcc----cCHHHHHHHHHHHHHHHhhcccCCCCEEEEECCC
Confidence 37899999999999999988863 344444322 277 8887764
No 79
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A*
Probab=93.13 E-value=0.1 Score=45.81 Aligned_cols=60 Identities=22% Similarity=0.361 Sum_probs=40.9
Q ss_pred CeEEEEeCCchhHHHHhhhhcccc-CCCCHHHHHHHh-----------------hh--ccccCCCCchHHHHHHHHHHhh
Q 023344 2 NMKIFVDTDADVRLARRIRRDTVE-RGRDVDSVLEQY-----------------AD--VIIPRGGDNHVAIDLIVQHIHT 61 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~~~-rgr~~~~v~~qy-----------------aD--~iip~~~~~~~a~~~i~~~i~~ 61 (283)
++|||+++|.+.|..||..+-... .+.+++++..+. +| ++|..+.- .++.+++.|.+
T Consensus 147 ~lkifl~A~~e~Ra~Rr~~~l~~~~~~~~~~~~~~~i~~rD~~d~~r~~~pl~~~~dal~IDTs~l---~iee~v~~I~~ 223 (233)
T 3r20_A 147 DVKIFLTASAEERARRRNAQNVANGLPDDYATVLADVQRRDHLDSTRPVSPLRAADDALVVDTSDM---DQAQVIAHLLD 223 (233)
T ss_dssp SEEEEEECCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHSCSSCCSCCTTSEEEECTTS---CHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhhhccccccccccCcEEEECCCC---CHHHHHHHHHH
Confidence 689999999999999998754432 456788887665 44 77776532 35555555555
Q ss_pred hhc
Q 023344 62 KLG 64 (283)
Q Consensus 62 ~l~ 64 (283)
.+.
T Consensus 224 ~i~ 226 (233)
T 3r20_A 224 LVT 226 (233)
T ss_dssp HC-
T ss_pred HHH
Confidence 544
No 80
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=92.68 E-value=0.081 Score=44.76 Aligned_cols=44 Identities=11% Similarity=0.042 Sum_probs=28.3
Q ss_pred CCeEEEEeCCchhHHHHhhhhccccCCCCHHHHHHHhhhccccCCCCc
Q 023344 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYADVIIPRGGDN 48 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~~qyaD~iip~~~~~ 48 (283)
+|..|||++|.++|+.|.+.+-..+= .+ -..++||+||+|++..
T Consensus 130 ~d~vi~v~a~~e~r~~Rli~~q~~~~---~~-~~~~~AD~vI~n~~~~ 173 (192)
T 2grj_A 130 CDHVITVVASRETILKRNREADRRLK---FQ-EDIVPQGIVVANNSTL 173 (192)
T ss_dssp CSEEEEEECCHHHHHHHCSSHHHHHT---TC-TTCCCCSEEEECSSCH
T ss_pred CCEEEEEECCHHHHHHHHHHhcCCch---hh-hHHhcCCEEEECCCCH
Confidence 47899999999999999832211100 00 0023499999987543
No 81
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=92.28 E-value=0.03 Score=51.12 Aligned_cols=38 Identities=21% Similarity=0.304 Sum_probs=31.2
Q ss_pred CCeEEEEeCCchhHHHHhhhhccccCC---CCHHHHHHHhh
Q 023344 1 MNMKIFVDTDADVRLARRIRRDTVERG---RDVDSVLEQYA 38 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~rd~~~rg---r~~~~v~~qya 38 (283)
+|++|||++|.+.++.|++.|++..|+ |+++++.+||+
T Consensus 218 ~D~~I~V~a~~~~~~~R~i~R~~~~rd~~~r~~~~~~~~~~ 258 (312)
T 3aez_A 218 FDFSLYVDARIEDIEQWYVSRFLAMRTTAFADPESHFHHYA 258 (312)
T ss_dssp CSEEEEEEECHHHHHHHHHHHHHHHTTTGGGSTTSTTGGGT
T ss_pred cCcEEEEECCHHHHHHHHHHHHHHHHhccccCcchhhhccc
Confidence 589999999999999999999876543 66777766664
No 82
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=91.86 E-value=0.19 Score=40.83 Aligned_cols=60 Identities=18% Similarity=0.389 Sum_probs=33.6
Q ss_pred CCeEEEEeCCchhHHHHhhhhccccCCCCHHHHHHHh---h---h--ccccCCCCchHHHHHHHHHHh
Q 023344 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQY---A---D--VIIPRGGDNHVAIDLIVQHIH 60 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~~qy---a---D--~iip~~~~~~~a~~~i~~~i~ 60 (283)
.|+.||+++|.++++.|...||-.+...-.+.+..+| + | ++|+++...+...+.|.+.+.
T Consensus 123 ~d~vi~l~~~~e~~~~Rl~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Id~~~~~~~~~~~i~~~l~ 190 (195)
T 2pbr_A 123 PDITLLLDIPVDIALRRLKEKNRFENKEFLEKVRKGFLELAKEEENVVVIDASGEEEEVFKEILRALS 190 (195)
T ss_dssp CSEEEEEECCHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHSTTEEEEETTSCHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCHHHHHHHhhccCccchHHHHHHHHHHHHHHHhhCCCEEEEECCCCHHHHHHHHHHHHH
Confidence 3789999999999998876654332000011222334 5 6 888775443333334444333
No 83
>3fdi_A Uncharacterized protein; cytidylate kinase like protein, PSI, MCSG, PRK04182 class ME structural genomics, protein structure initiative; 2.20A {Eubacterium ventriosum}
Probab=90.21 E-value=0.34 Score=40.98 Aligned_cols=28 Identities=29% Similarity=0.489 Sum_probs=21.7
Q ss_pred eEEEEeCCchhHHHHhhhhccccCCCCHHHHH
Q 023344 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVL 34 (283)
Q Consensus 3 ~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~ 34 (283)
++||+++|.+.|..|+..| .|++.+++.
T Consensus 119 ~~V~L~A~~e~r~~R~~~~----~~~~~~~~~ 146 (201)
T 3fdi_A 119 ISAFILGDKDTKTKRVMER----EGVDEKTAL 146 (201)
T ss_dssp EEEEEEECHHHHHHHHHHH----HTCCHHHHH
T ss_pred EEEEEECCHHHHHHHHHHH----hCCCHHHHH
Confidence 7999999999999998765 356655443
No 84
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=89.03 E-value=0.23 Score=40.57 Aligned_cols=58 Identities=19% Similarity=0.364 Sum_probs=32.6
Q ss_pred CeEEEEeCCchhHHHHhhhhccccCCCCHHHHHHHh---------hhccccCCCCchHHHHHHHHHHhhhh
Q 023344 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQY---------ADVIIPRGGDNHVAIDLIVQHIHTKL 63 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~~qy---------aD~iip~~~~~~~a~~~i~~~i~~~l 63 (283)
|+.||+++|.++++.|...||-.+...-.+.+..+| ..++|.++.. ++.+.+.|.+.+
T Consensus 123 d~vi~l~~~~e~~~~Rl~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Id~~~~----~e~~~~~i~~~l 189 (197)
T 2z0h_A 123 DLTFYIDVDVETALKRKGELNRFEKREFLERVREGYLVLAREHPERIVVLDGKRS----IEEIHRDVVREV 189 (197)
T ss_dssp SEEEEEECCHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHCTTTEEEEETTSC----HHHHHHHHHHHT
T ss_pred CEEEEEeCCHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhCCCCEEEEeCCCC----HHHHHHHHHHHH
Confidence 788999999999999988885443331223334455 1356776544 334444444444
No 85
>3hdt_A Putative kinase; structura genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.79A {Clostridium symbiosum atcc 14940}
Probab=88.67 E-value=0.68 Score=40.01 Aligned_cols=28 Identities=25% Similarity=0.305 Sum_probs=21.6
Q ss_pred eEEEEeCCchhHHHHhhhhccccCCCCHHHHH
Q 023344 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVL 34 (283)
Q Consensus 3 ~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~ 34 (283)
++||+++|.+.|..|...| .|++.+...
T Consensus 139 ~~VfL~A~~e~r~~Ri~~~----~~~~~~~a~ 166 (223)
T 3hdt_A 139 IRIFVYTDKVKKVQRVMEV----DCIDEERAK 166 (223)
T ss_dssp EEEEEECCHHHHHHHHHHH----HTCCHHHHH
T ss_pred EEEEEECCHHHHHHHHHHh----cCCCHHHHH
Confidence 7999999999998887765 456665443
No 86
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=87.96 E-value=0.34 Score=39.89 Aligned_cols=53 Identities=19% Similarity=0.310 Sum_probs=22.8
Q ss_pred eEEEEeCCchhHHHHhhhhccccCCCCHHHHHHHh---------------hhccccCCCCchHHHHHHHHHHh
Q 023344 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQY---------------ADVIIPRGGDNHVAIDLIVQHIH 60 (283)
Q Consensus 3 ~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~~qy---------------aD~iip~~~~~~~a~~~i~~~i~ 60 (283)
..|||..|+...|.+|+. +||++.++.+++. +|+||.|+ +.+.+.+.+.+.|.
T Consensus 116 ~~i~i~~p~~~~l~~Rl~----~Rg~~~~~~i~~rl~~~~~~~~~~~~~~~d~vi~nd-~~~~a~~~l~~~i~ 183 (186)
T 3a00_A 116 RFLFIAPPSVEDLKKRLE----GRGTETEESINKRLSAAQAELAYAETGAHDKVIVND-DLDKAYKELKDFIF 183 (186)
T ss_dssp EEEEEECSCC-------------------------------------CCCCSEEEECS-SHHHHHHHHHHHHT
T ss_pred EEEEEECcCHHHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHhhcccCCcEEEECc-CHHHHHHHHHHHHH
Confidence 458999999777888765 4666655555432 68888876 55556666655553
No 87
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=87.93 E-value=0.53 Score=37.44 Aligned_cols=62 Identities=24% Similarity=0.375 Sum_probs=38.3
Q ss_pred CeEEEEeCCchhHHHHhhhhccccCCC---CHHHHHHHh---------hhccccCCCCchHHHHHHHHHHhhhhcccccc
Q 023344 2 NMKIFVDTDADVRLARRIRRDTVERGR---DVDSVLEQY---------ADVIIPRGGDNHVAIDLIVQHIHTKLGQHDLC 69 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~~~rgr---~~~~v~~qy---------aD~iip~~~~~~~a~~~i~~~i~~~l~~~~~~ 69 (283)
|+.||+++|.++++.|-..|. .|.. ..+.+.++| ||++| ++.. .++.+.+.|.+.+.+.+++
T Consensus 94 ~~~i~l~~~~e~~~~R~~~r~--~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i-~~~~---~~~~~~~~i~~~l~~~~~~ 167 (168)
T 2pt5_A 94 GTTVFIDIPFEVFLERCKDSK--ERPLLKRPLDEIKNLFEERRKIYSKADIKV-KGEK---PPEEVVKEILLSLEGNALG 167 (168)
T ss_dssp SEEEEEECCHHHHHHHCBCTT--CCBGGGSCGGGTHHHHHHHHHHHTTSSEEE-ECSS---CHHHHHHHHHHHHHTSCC-
T ss_pred CEEEEEECCHHHHHHHHhCCC--CCCCCcchHHHHHHHHHHHHHHHHhCCEEE-CCCC---CHHHHHHHHHHHHHhccCC
Confidence 688999999999998877653 1111 122233222 79998 6532 3556667777777665544
No 88
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=87.56 E-value=1.1 Score=37.02 Aligned_cols=62 Identities=15% Similarity=0.040 Sum_probs=40.9
Q ss_pred CeEEEEeCCchhHHHHhhhhccccCCCCHHHHHHHh----------hhccccCCCCchHHHHHHHHHHhhhhcccccc
Q 023344 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQY----------ADVIIPRGGDNHVAIDLIVQHIHTKLGQHDLC 69 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~~qy----------aD~iip~~~~~~~a~~~i~~~i~~~l~~~~~~ 69 (283)
+..||+++|.++++.|...|+.. .++.+.+-.|+ +|++|+++.. ++.+.+.|.+.|.+.++.
T Consensus 112 ~~vi~l~~~~e~~~~Rl~~R~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Id~~~~----~~e~~~~I~~~l~~~~~~ 183 (202)
T 3t61_A 112 LAFVFLHGSESVLAERMHHRTGH--FMPSSLLQTQLETLEDPRGEVRTVAVDVAQP----LAEIVREALAGLARLAEN 183 (202)
T ss_dssp CEEEEEECCHHHHHHHHHHHHSS--CCCHHHHHHHHHHCCCCTTSTTEEEEESSSC----HHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHhhcc--CCCHHHHHHHHHhcCCCCCCCCeEEEeCCCC----HHHHHHHHHHHHHHhhhc
Confidence 47899999999998888877642 23333333333 7899987643 455566666666666554
No 89
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=87.31 E-value=0.99 Score=37.15 Aligned_cols=22 Identities=27% Similarity=0.522 Sum_probs=19.5
Q ss_pred CeEEEEeCCchhHHHHhhhhcc
Q 023344 2 NMKIFVDTDADVRLARRIRRDT 23 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~ 23 (283)
|+.||+++|.++++.|...|+.
T Consensus 122 ~~~i~l~~~~e~~~~Rl~~R~~ 143 (203)
T 1ukz_A 122 KFILFFDCPEDIMLERLLERGK 143 (203)
T ss_dssp SEEEEEECCHHHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHhccc
Confidence 7899999999999999888864
No 90
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=87.04 E-value=1.3 Score=36.57 Aligned_cols=62 Identities=19% Similarity=0.349 Sum_probs=37.9
Q ss_pred CeEEEEeCCchhHHHHhh-hhcccc--CCCCHH----HHHHHh---------hhccccCCC-CchHHHHHHHHHHhhhh
Q 023344 2 NMKIFVDTDADVRLARRI-RRDTVE--RGRDVD----SVLEQY---------ADVIIPRGG-DNHVAIDLIVQHIHTKL 63 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~-~rd~~~--rgr~~~----~v~~qy---------aD~iip~~~-~~~~a~~~i~~~i~~~l 63 (283)
+..||+++|.++++.|-. .|..+. .+.+.+ .+..+| ||++|+++. .....++.|.+.+.+.|
T Consensus 119 ~~vi~L~~~~e~l~~Rl~~~~~~Rp~~~~~~~~~~~~~i~~~~~~r~~~y~~ad~~Idt~~~s~ee~~~~I~~~l~~~l 197 (199)
T 3vaa_A 119 GKTVFLNVHPDVLFRRLRIAKQQRPILQGKEDDELMDFIIQALEKRAPFYTQAQYIFNADELEDRWQIESSVQRLQELL 197 (199)
T ss_dssp SEEEEEECCHHHHHHHHHHTGGGCGGGTTCCHHHHHHHHHHHHHHHHHHHTTSSEEEECCCCSSHHHHHHHHHHHHHHT
T ss_pred CEEEEEECCHHHHHHHHhcCCCCCCCcCCCChhhHHHHHHHHHHHHHHHHhhCCEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 578999999998755543 221111 233432 222333 899998766 45556777777777665
No 91
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=86.42 E-value=1.1 Score=37.14 Aligned_cols=56 Identities=14% Similarity=0.135 Sum_probs=34.0
Q ss_pred eEEEEeCCchhHHHHhhhhccccCCCC-HHHHHH--------------HhhhccccCCCCchHHHHHHHHHHhhhh
Q 023344 3 MKIFVDTDADVRLARRIRRDTVERGRD-VDSVLE--------------QYADVIIPRGGDNHVAIDLIVQHIHTKL 63 (283)
Q Consensus 3 ~~ifv~~~~d~~l~rr~~rd~~~rgr~-~~~v~~--------------qyaD~iip~~~~~~~a~~~i~~~i~~~l 63 (283)
+.||+++.+...+.+|+. +||++ .+.+.+ .+||++|.|+ +...+++.|.+.|.+.+
T Consensus 128 ~~i~l~~~s~e~l~~Rl~----~R~~~~~~~i~~rl~~~~~~~~~~~~~~~d~vi~n~-~~e~~~~~i~~~i~~~~ 198 (204)
T 2qor_A 128 IYIFVKPPSIDILLGRLK----NRNTEKPEEINKRMQELTREMDEADKVGFNYFIVND-DLARTYAELREYLLGSY 198 (204)
T ss_dssp EEEEEECSCHHHHHHHHH----TCTTSCHHHHHHHHHHHHHHHHHHHHHTCSEEEECS-SHHHHHHHHHHHHHHHC
T ss_pred EEEEEcCCCHHHHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHhhhccCcEEEECc-CHHHHHHHHHHHHHHHh
Confidence 679999555556666664 35542 233221 1279999876 55566777777776554
No 92
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=86.11 E-value=1.3 Score=36.05 Aligned_cols=22 Identities=23% Similarity=0.312 Sum_probs=18.8
Q ss_pred CeEEEEeCCchhHHHHhhhhcc
Q 023344 2 NMKIFVDTDADVRLARRIRRDT 23 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~ 23 (283)
|+.||+++|.++++.|...|+.
T Consensus 117 ~~~i~l~~~~~~~~~R~~~R~~ 138 (199)
T 2bwj_A 117 QLVICMDCSADTMTNRLLQMSR 138 (199)
T ss_dssp SEEEEEECCHHHHHHHHHHTCC
T ss_pred CEEEEEECCHHHHHHHHHcCCC
Confidence 7899999999998888777764
No 93
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=85.13 E-value=1.3 Score=35.96 Aligned_cols=25 Identities=20% Similarity=0.517 Sum_probs=18.6
Q ss_pred CeEEEEeCCchhHHHHhhhhccccCCCCHH
Q 023344 2 NMKIFVDTDADVRLARRIRRDTVERGRDVD 31 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~~~rgr~~~ 31 (283)
|+.||+++|.++++.|-.. |||+.+
T Consensus 126 d~vi~L~~~~e~~~~Rl~~-----R~r~~~ 150 (205)
T 2jaq_A 126 DIVIYLRVSTKTAISRIKK-----RGRSEE 150 (205)
T ss_dssp SEEEEEECCHHHHHHHHHH-----HTCHHH
T ss_pred CEEEEEeCCHHHHHHHHHH-----cCChhh
Confidence 6789999999998876433 456554
No 94
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=84.84 E-value=1.4 Score=36.54 Aligned_cols=22 Identities=23% Similarity=0.167 Sum_probs=19.1
Q ss_pred CCeEEEEeCCchhHHHHhhhhc
Q 023344 1 MNMKIFVDTDADVRLARRIRRD 22 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~rd 22 (283)
+|..+|++++.++++.|+..|.
T Consensus 130 ~d~~i~l~~~~~~~~~R~~~R~ 151 (207)
T 2qt1_A 130 WNRSYFLTIPYEECKRRRSTRV 151 (207)
T ss_dssp CSEEEEEECCHHHHHHHHHHSC
T ss_pred cCeeEEEECCHHHHHHHHHHcC
Confidence 4789999999999999887775
No 95
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=83.40 E-value=2.4 Score=33.37 Aligned_cols=60 Identities=23% Similarity=0.336 Sum_probs=34.9
Q ss_pred CeEEEEeCCchhHHHHhhhhc--cccCCCCHHHHHHHh---------hhccccCCC-CchHHHHHHHHHHhhh
Q 023344 2 NMKIFVDTDADVRLARRIRRD--TVERGRDVDSVLEQY---------ADVIIPRGG-DNHVAIDLIVQHIHTK 62 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd--~~~rgr~~~~v~~qy---------aD~iip~~~-~~~~a~~~i~~~i~~~ 62 (283)
|+.||+++|.++.+.|-..|. ..+ ....+.+.+.| ++++|+++. ..+...+.|.+.++..
T Consensus 96 ~~~i~l~~~~e~~~~R~~~r~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~ev~~~I~~~~~~~ 167 (173)
T 3kb2_A 96 AKVVYLHADPSVIKKRLRVRGDEYIE-GKDIDSILELYREVMSNAGLHTYSWDTGQWSSDEIAKDIIFLVELE 167 (173)
T ss_dssp EEEEEEECCHHHHHHHHHHHSCSCCC-HHHHHHHHHHHHHHHHTCSSCEEEEETTTSCHHHHHHHHHHHHHHG
T ss_pred CEEEEEeCCHHHHHHHHHhcCCcchh-hhHHHHHHHHHHHHHhhcCCCEEEEECCCCCHHHHHHHHHHHHhCC
Confidence 578999999998887765551 111 11223344444 788898763 4344445555555443
No 96
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=81.31 E-value=2.9 Score=33.54 Aligned_cols=22 Identities=18% Similarity=0.513 Sum_probs=19.5
Q ss_pred CeEEEEeCCchhHHHHhhhhcc
Q 023344 2 NMKIFVDTDADVRLARRIRRDT 23 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~ 23 (283)
|+.||+++|.++++.|...|+.
T Consensus 115 ~~~i~l~~~~e~~~~R~~~R~~ 136 (196)
T 1tev_A 115 SFVLFFDCNNEICIERCLERGK 136 (196)
T ss_dssp EEEEEEECCHHHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHcccc
Confidence 5789999999999999888874
No 97
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A*
Probab=81.18 E-value=1.9 Score=36.59 Aligned_cols=22 Identities=23% Similarity=0.416 Sum_probs=18.8
Q ss_pred CCeEEEEeCCchhHHHHhhhhc
Q 023344 1 MNMKIFVDTDADVRLARRIRRD 22 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~rd 22 (283)
.|+.||+|+|.++++.|-..|+
T Consensus 147 pD~vi~Ld~~~e~~~~Ri~~R~ 168 (230)
T 2vp4_A 147 ADLIIYLRTSPEVAYERIRQRA 168 (230)
T ss_dssp CSEEEEEECCHHHHHHHHHHHC
T ss_pred CCEEEEEeCCHHHHHHHHHHcC
Confidence 4899999999999999866664
No 98
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=80.89 E-value=2 Score=34.45 Aligned_cols=62 Identities=16% Similarity=0.186 Sum_probs=37.7
Q ss_pred CeEEEEeCCchhHHHHhhhhccccCCCC--HHHHHHHh----------hhccccCCCCchHHHHHHHHHHhhhhccc
Q 023344 2 NMKIFVDTDADVRLARRIRRDTVERGRD--VDSVLEQY----------ADVIIPRGGDNHVAIDLIVQHIHTKLGQH 66 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~~~rgr~--~~~v~~qy----------aD~iip~~~~~~~a~~~i~~~i~~~l~~~ 66 (283)
++.||+++|.++++.|...|....|... .+.+.++| +|++|+.+.. .++.+++.|.+.+...
T Consensus 94 ~~~i~l~~~~e~~~~R~~~r~~~~r~~~~~~~~i~~~~~~r~~~y~~~~~~~Idt~~~---~~eev~~~I~~~l~~~ 167 (175)
T 1via_A 94 GFCIYLKADFEYLKKRLDKDEISKRPLFYDEIKAKKLYNERLSKYEQKANFILNIENK---NIDELLSEIKKVIKEG 167 (175)
T ss_dssp CEEEEEECCHHHHTTCCCGGGTTTSCTTCCHHHHHHHHHHHHHHHHHHCSEEEECTTC---CHHHHHHHHHHHHC--
T ss_pred CEEEEEeCCHHHHHHHHhcccCCCCCCcccHHHHHHHHHHHHHHHHhcCCEEEECCCC---CHHHHHHHHHHHHHhc
Confidence 5789999999998887766631123222 44444443 7898876532 3556666666666543
No 99
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=80.85 E-value=0.94 Score=36.14 Aligned_cols=57 Identities=14% Similarity=0.278 Sum_probs=32.4
Q ss_pred CeEEEEeCCchhHHHHhhhhccccCCC--CHHHHHHHh----------hhccccCCCCchHHHHHHHHHHhhh
Q 023344 2 NMKIFVDTDADVRLARRIRRDTVERGR--DVDSVLEQY----------ADVIIPRGGDNHVAIDLIVQHIHTK 62 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~~~rgr--~~~~v~~qy----------aD~iip~~~~~~~a~~~i~~~i~~~ 62 (283)
|+.||+++|.++++.|...|....|+. +.+.+...| ||++|.++. .++.+.+.|.+.
T Consensus 98 ~~vi~l~~~~e~~~~Rl~~r~~~~r~~~~~~~~~~~~~~~r~~~~~~~a~~~Id~~~----~~e~~~~~I~~~ 166 (168)
T 1zuh_A 98 GTTFYLKMDFETLIKRLNQKEREKRPLLNNLTQAKELFEKRQALYEKNASFIIDARG----GLNNSLKQVLQF 166 (168)
T ss_dssp EEEEEEECCHHHHHHHHCC--------CCTTHHHHHHHHHHHHHHHHTCSEEEEGGG----CHHHHHHHHHHC
T ss_pred CEEEEEECCHHHHHHHHhccCCCCCCCccCHHHHHHHHHHHHHHHHHHCCEEEECCC----CHHHHHHHHHHH
Confidence 578999999999998876661111111 123333222 899997654 345555555544
No 100
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=79.13 E-value=1.9 Score=35.16 Aligned_cols=20 Identities=25% Similarity=0.468 Sum_probs=16.4
Q ss_pred CeEEEEeCCchhHHHHhhhh
Q 023344 2 NMKIFVDTDADVRLARRIRR 21 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~r 21 (283)
|..||+++|.++++.|-..|
T Consensus 102 ~~vi~l~~~~e~~~~Rl~~R 121 (184)
T 1y63_A 102 HMVVVLHTSTEVLFERLTKR 121 (184)
T ss_dssp SEEEEEECCHHHHHHHHHHT
T ss_pred CEEEEEECCHHHHHHHHHhC
Confidence 67899999999888776555
No 101
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=78.51 E-value=4.3 Score=32.42 Aligned_cols=22 Identities=23% Similarity=0.451 Sum_probs=18.9
Q ss_pred CeEEEEeCCchhHHHHhhhhcc
Q 023344 2 NMKIFVDTDADVRLARRIRRDT 23 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~ 23 (283)
|+.||+++|.++++.|-..|+.
T Consensus 112 ~~vi~l~~~~e~~~~R~~~R~~ 133 (194)
T 1qf9_A 112 KFVLFFDCPEEVMTQRLLKRGE 133 (194)
T ss_dssp EEEEEEECCHHHHHHHHHHHHT
T ss_pred CEEEEEECCHHHHHHHHHhccc
Confidence 5789999999999988887763
No 102
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=77.89 E-value=0.69 Score=37.80 Aligned_cols=57 Identities=11% Similarity=0.152 Sum_probs=35.1
Q ss_pred eEEEEeCCchhHHHHhhhhccccCCCCHHHHH---HHhhhccccCCCCchHHHHHHHHHHhh
Q 023344 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVL---EQYADVIIPRGGDNHVAIDLIVQHIHT 61 (283)
Q Consensus 3 ~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~---~qyaD~iip~~~~~~~a~~~i~~~i~~ 61 (283)
..|||.+++..+|.|| .-++....+..+.+- ..++|++|.|. +.+.+++.+.+.|.+
T Consensus 119 ~~ifi~~p~~~~l~~R-~~~i~r~~~~~~~~~~~~~~~~d~~i~n~-~~~~~~~~l~~~i~~ 178 (180)
T 1kgd_A 119 FVVFIAAPTITPGLNE-DESLQRLQKESDILQRTYAHYFDLTIINN-EIDETIRHLEEAVEL 178 (180)
T ss_dssp EEEEEECCSCCTTSCC-SHHHHHHHHHHHHHHHHHGGGCSEEEECS-SHHHHHHHHHHHHHH
T ss_pred EEEEEECCCHHHHHhh-HHHHHHHHHHHHHHHHhhhCCCcEEEECc-CHHHHHHHHHHHHHH
Confidence 5799999988888887 222211111112221 23399999886 566777777776654
No 103
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=77.46 E-value=4.3 Score=35.19 Aligned_cols=65 Identities=23% Similarity=0.335 Sum_probs=36.2
Q ss_pred CCeEEEEeCCchhHHHHhhhhccccCCC--C---HHHHHHHh---h-----hccccCCCCchHHHHHHHHHHhhhhcc
Q 023344 1 MNMKIFVDTDADVRLARRIRRDTVERGR--D---VDSVLEQY---A-----DVIIPRGGDNHVAIDLIVQHIHTKLGQ 65 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~rd~~~rgr--~---~~~v~~qy---a-----D~iip~~~~~~~a~~~i~~~i~~~l~~ 65 (283)
.|+.||+|+|.++.+.|...|.-.+|=. + ++.+.++| | .++|+.+...+...+.|.+.|.+.|.+
T Consensus 155 PDlvi~Ldv~~e~~~~Ri~~R~~~dr~E~~~~~~~~rv~~~y~~la~~~~~~~vIDa~~sieeV~~~I~~~l~~~l~~ 232 (236)
T 3lv8_A 155 PDLTLYLDIDPKLGLERARGRGELDRIEKMDISFFERARERYLELANSDDSVVMIDAAQSIEQVTADIRRALQDWLSQ 232 (236)
T ss_dssp CSEEEEEECCHHHHHHC-----CCCTTTTSCHHHHHHHHHHHHHHHHHCTTEEEEETTSCHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEeCCHHHHHHHHHhcCCcchhhhhHHHHHHHHHHHHHHHHHHCCCEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 3889999999999988877674222211 1 23455556 2 366776555444455555566555543
No 104
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=76.71 E-value=3 Score=34.37 Aligned_cols=56 Identities=14% Similarity=0.118 Sum_probs=35.5
Q ss_pred eEEEEeCCchhHHHHhhhhccccCCCCHHHHHHHh----------hhccccCCCCchHHHHHHHHHHhhhhc
Q 023344 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQY----------ADVIIPRGGDNHVAIDLIVQHIHTKLG 64 (283)
Q Consensus 3 ~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~~qy----------aD~iip~~~~~~~a~~~i~~~i~~~l~ 64 (283)
..||+++|.++++.|-..|+-. ..+.+.+..|| ||++|+++.. ++.+.+.|.+.|.
T Consensus 127 ~vv~l~~~~e~l~~Rl~~R~~~--~~~~~~l~~~~~~~~~~~~~~~~~~Id~~~~----~~e~~~~I~~~l~ 192 (200)
T 4eun_A 127 DFLHLDGPAEVIKGRMSKREGH--FMPASLLQSQLATLEALEPDESGIVLDLRQP----PEQLIERALTWLD 192 (200)
T ss_dssp EEEEEECCHHHHHHHHTTCSCC--SSCGGGHHHHHHHCCCCCTTSCEEEEETTSC----HHHHHHHHHHHHC
T ss_pred EEEEEeCCHHHHHHHHHhcccC--CCCHHHHHHHHHHhCCCCCCCCeEEEECCCC----HHHHHHHHHHHHH
Confidence 4689999999887776666532 22344444555 7899987543 4455555555554
No 105
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=76.20 E-value=1.5 Score=35.45 Aligned_cols=59 Identities=17% Similarity=0.267 Sum_probs=31.4
Q ss_pred eEEEEeCCchhHHHHhh--hhccccCCCC-----HHHHHHHh----------hhccccCCCC-chHHHHHHHHHHhhhh
Q 023344 3 MKIFVDTDADVRLARRI--RRDTVERGRD-----VDSVLEQY----------ADVIIPRGGD-NHVAIDLIVQHIHTKL 63 (283)
Q Consensus 3 ~~ifv~~~~d~~l~rr~--~rd~~~rgr~-----~~~v~~qy----------aD~iip~~~~-~~~a~~~i~~~i~~~l 63 (283)
+.||+++|.+++ .+|+ .++- .|+-. .+.+..+| ||++|+++.. ....++.|.+.+...+
T Consensus 100 ~vi~L~~~~e~l-~~Rl~~~~~~-~rp~~~~~~~~~~l~~~~~~r~~~y~~~ad~~Idt~~~~~~e~~~~I~~~l~~~~ 176 (185)
T 3trf_A 100 VVIYLTASIDTQ-LKRIGQKGEM-RRPLFIKNNSKEKLQQLNEIRKPLYQAMADLVYPTDDLNPRQLATQILVDIKQTY 176 (185)
T ss_dssp EEEEEECCHHHH-HHHHHCCTTC-SSCCCCCHHHHHHHHHHHHHHHHHHHHHCSEEEECTTCCHHHHHHHHHHHSCC--
T ss_pred cEEEEECCHHHH-HHHHhhcCCC-CCCCCCCCCHHHHHHHHHHHHHHHHhhcCCEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 579999999874 5556 3332 23211 11222222 8999998653 3444455555444433
No 106
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=76.01 E-value=6.5 Score=31.55 Aligned_cols=21 Identities=19% Similarity=0.485 Sum_probs=18.3
Q ss_pred CeEEEEeCCchhHHHHhhhhc
Q 023344 2 NMKIFVDTDADVRLARRIRRD 22 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd 22 (283)
|+.||+++|.++++.|...|+
T Consensus 114 ~~vi~l~~~~e~~~~R~~~R~ 134 (196)
T 2c95_A 114 TLLLYVDAGPETMTQRLLKRG 134 (196)
T ss_dssp SEEEEEECCHHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHccC
Confidence 689999999999988877775
No 107
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=75.99 E-value=1.6 Score=34.67 Aligned_cols=59 Identities=8% Similarity=0.025 Sum_probs=33.8
Q ss_pred CeEEEEeCCchhHHHHhh--hhccccCCCC-----HHHHHHHh---------hhccccCCCCchHHHHHHHHHHhhhhc
Q 023344 2 NMKIFVDTDADVRLARRI--RRDTVERGRD-----VDSVLEQY---------ADVIIPRGGDNHVAIDLIVQHIHTKLG 64 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~--~rd~~~rgr~-----~~~v~~qy---------aD~iip~~~~~~~a~~~i~~~i~~~l~ 64 (283)
|+.||+++|.++++.|-. .|. ..|... .+.+..+| ||++|.++.. .++.+.+.|.+.+.
T Consensus 95 ~~~i~l~~~~e~~~~R~~~~~r~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Id~~~~---~~~~~~~~i~~~l~ 169 (173)
T 1e6c_A 95 GTVVYLFAPAEELALRLQASLQA-HQRPTLTGRPIAEEMEAVLREREALYQDVAHYVVDATQ---PPAAIVCELMQTMR 169 (173)
T ss_dssp SEEEEEECCHHHHHHHHHHHHCS-CCCCCTTHHHHHHHHHHHHHHHHHHHHHHCSEEEETTS---CHHHHHHHHHHHTT
T ss_pred CeEEEEECCHHHHHHHHhhccCC-CCCCcCCCCCHHHHHHHHHHHHHHHHHhCcEEEECCCC---CHHHHHHHHHHHhc
Confidence 678999999999887766 551 112211 11133333 7899987522 23455555555543
No 108
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=75.95 E-value=2.5 Score=33.56 Aligned_cols=60 Identities=18% Similarity=0.258 Sum_probs=29.9
Q ss_pred CeEEEEeCCchhHHHHhhhhcccc--CCCC--HHHHHHHh----------hhccccCCCCchHHHHHHHHHHhhhhc
Q 023344 2 NMKIFVDTDADVRLARRIRRDTVE--RGRD--VDSVLEQY----------ADVIIPRGGDNHVAIDLIVQHIHTKLG 64 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~~~--rgr~--~~~v~~qy----------aD~iip~~~~~~~a~~~i~~~i~~~l~ 64 (283)
++.+|++++.+++..|...|.-.. ++.+ .+.+..|| ||++|.++.. .++.+.+.|.+.+.
T Consensus 98 ~~~i~l~~~~~~l~~R~~~r~~r~~~~~~~~~~~~~~~~~~~r~~~~~~~a~~~id~~~~---~~~~~~~~i~~~l~ 171 (173)
T 1kag_A 98 GVVVYLETTIEKQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEEIADVTIRTDDQ---SAKVVANQIIHMLE 171 (173)
T ss_dssp SEEEECCCCHHHHHSCC------CCSSSSCCCHHHHHHHHHHHHHHHHHHCSEEC--------CHHHHHHHHHHHHC
T ss_pred CEEEEEeCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHHHHHHHHHHhhCCEEEECCCC---CHHHHHHHHHHHHH
Confidence 678999999998887766653211 1122 34444443 8999987532 23444555555443
No 109
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=75.81 E-value=4.5 Score=32.30 Aligned_cols=21 Identities=33% Similarity=0.539 Sum_probs=18.4
Q ss_pred CeEEEEeCCchhHHHHhhhhc
Q 023344 2 NMKIFVDTDADVRLARRIRRD 22 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd 22 (283)
|+.||+++|.++++.||+..+
T Consensus 116 ~~~i~l~~~~~~~~~rRl~~~ 136 (192)
T 1kht_A 116 DLIIVVETTGDEILMRRMSDE 136 (192)
T ss_dssp SEEEEEECCHHHHHHHHHTSS
T ss_pred CEEEEEeCCHHHHHHHHhhhc
Confidence 679999999999998888764
No 110
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=74.79 E-value=5.8 Score=31.72 Aligned_cols=21 Identities=24% Similarity=0.322 Sum_probs=17.6
Q ss_pred CeEEEEeCCchhHHHHhhhhc
Q 023344 2 NMKIFVDTDADVRLARRIRRD 22 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd 22 (283)
|..||+++|.++++.|...|.
T Consensus 98 ~~vi~L~~~~e~l~~R~~~r~ 118 (180)
T 3iij_A 98 HIVFVLRTDTNVLYERLETRG 118 (180)
T ss_dssp SEEEEEECCHHHHHHHHHHTT
T ss_pred CEEEEEECCHHHHHHHHHHcC
Confidence 689999999999888876663
No 111
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=74.47 E-value=2.5 Score=34.66 Aligned_cols=58 Identities=16% Similarity=0.191 Sum_probs=32.7
Q ss_pred CeEEEEeCCchhHHHHhhhhccccCCCCH---HHHHHHh-------hhccccCCCCchHHHHHHHHHHhhhhcc
Q 023344 2 NMKIFVDTDADVRLARRIRRDTVERGRDV---DSVLEQY-------ADVIIPRGGDNHVAIDLIVQHIHTKLGQ 65 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~~~rgr~~---~~v~~qy-------aD~iip~~~~~~~a~~~i~~~i~~~l~~ 65 (283)
|+.||+++|.++++.|-..|. +|-.+. +.+..+| ++++|+++.. ++.+.+.|.+.+.+
T Consensus 132 d~vi~l~~~~e~~~~Rl~~r~--~r~~~~~~~~~~~~~~~~~~~~~~~~~Id~~~~----~~~~~~~i~~~l~~ 199 (212)
T 2wwf_A 132 DVVFYLNVPPNYAQNRSDYGE--EIYEKVETQKKIYETYKHFAHEDYWINIDATRK----IEDIHNDIVKEVTK 199 (212)
T ss_dssp SEEEEEECCTTGGGGSTTTTS--STTCSHHHHHHHHHHGGGGTTCTTEEEEECSSC----HHHHHHHHHHHHTT
T ss_pred CEEEEEeCCHHHHHHhhccCc--ccccHHHHHHHHHHHHHHHhccCCEEEEECCCC----HHHHHHHHHHHHHH
Confidence 688999999999876643321 121111 1233555 4788876533 44455555555543
No 112
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=73.51 E-value=2.2 Score=34.43 Aligned_cols=61 Identities=15% Similarity=0.177 Sum_probs=37.2
Q ss_pred CeEEEEeCCchhHHHHhhhhcccc--CCCCHHH-HHHHh----------hhccccCCCCchHHHHHHHHHHhhhhcc
Q 023344 2 NMKIFVDTDADVRLARRIRRDTVE--RGRDVDS-VLEQY----------ADVIIPRGGDNHVAIDLIVQHIHTKLGQ 65 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~~~--rgr~~~~-v~~qy----------aD~iip~~~~~~~a~~~i~~~i~~~l~~ 65 (283)
+..||+++|.++++.|-..|+-.. ...+.++ +..+| +|++|.++.. .++.+.+.|.+.+..
T Consensus 95 ~~vV~L~~~~e~~~~Rl~~r~~r~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~Idt~~~---s~ee~~~~I~~~l~~ 168 (184)
T 2iyv_A 95 HTVVYLEISAAEGVRRTGGNTVRPLLAGPDRAEKYRALMAKRAPLYRRVATMRVDTNRR---NPGAVVRHILSRLQV 168 (184)
T ss_dssp SCEEEEECCHHHHHHHTTCCCCCSSTTSCCHHHHHHHHHHHHHHHHHHHCSEEEECSSS---CHHHHHHHHHTTSCC
T ss_pred CeEEEEeCCHHHHHHHHhCCCCCCCccCCCHHHHHHHHHHHHHHHHhccCCEEEECCCC---CHHHHHHHHHHHHhh
Confidence 578999999999988766664211 1112222 22222 8999987532 245666777776654
No 113
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=72.33 E-value=3.3 Score=33.90 Aligned_cols=61 Identities=10% Similarity=0.081 Sum_probs=31.5
Q ss_pred CeEEEEeCCchhHHHHhhhhccccCCCC--H-HHHHHHh---h------hccccCCCCchHHHHHHHHHHhhhhc
Q 023344 2 NMKIFVDTDADVRLARRIRRDTVERGRD--V-DSVLEQY---A------DVIIPRGGDNHVAIDLIVQHIHTKLG 64 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~~~rgr~--~-~~v~~qy---a------D~iip~~~~~~~a~~~i~~~i~~~l~ 64 (283)
|+.||+++|.++++.|- .|+ .+|-.+ . +.+..+| + .++|.++.......+.|.+.+.+.+.
T Consensus 131 d~vi~l~~~~e~~~~Rl-~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Id~~~~~e~~~~~i~~~l~~~l~ 203 (215)
T 1nn5_A 131 DLVLFLQLQLADAAKRG-AFG-HERYENGAFQERALRCFHQLMKDTTLNWKMVDASKSIEAVHEDIRVLSEDAIA 203 (215)
T ss_dssp SEEEEEECCHHHHHHC-------CTTCSHHHHHHHHHHHHHHTTCTTSCEEEEETTSCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHh-ccC-ccccchHHHHHHHHHHHHHHHHhCCCCEEEEECCCCHHHHHHHHHHHHHHHHh
Confidence 78899999999877664 443 122111 1 2233455 2 26776554444445555555555443
No 114
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis}
Probab=72.11 E-value=1.3 Score=38.25 Aligned_cols=60 Identities=17% Similarity=0.168 Sum_probs=27.2
Q ss_pred CCeEEEEeCCchhHHHHhhhhccccCCCCH---HHHHHHh---------hhccccCCCCchHHHHHHHHHHhhhh
Q 023344 1 MNMKIFVDTDADVRLARRIRRDTVERGRDV---DSVLEQY---------ADVIIPRGGDNHVAIDLIVQHIHTKL 63 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~rd~~~rgr~~---~~v~~qy---------aD~iip~~~~~~~a~~~i~~~i~~~l 63 (283)
.|+.||+|+|.++.+.|. .||--|+ .+. +.+.++| ..++|+++...+.- +.|.+.|.+.|
T Consensus 146 PDl~I~Ldv~~e~~~~Ri-~rdr~E~-~~~e~~~rv~~~y~~la~~~~~~~~vIDa~~sieeV-~~I~~~l~~~l 217 (223)
T 3ld9_A 146 PDITFIIDVDINESLSRS-CKNGYEF-ADMEFYYRVRDGFYDIAKKNPHRCHVITDKSETYDI-DDINFVHLEVI 217 (223)
T ss_dssp CSEEEEEECC------------------CHHHHHHHHHHHHHHHHHCTTTEEEEESSCSSSCC-CHHHHHHHHHH
T ss_pred CCeEEEEeCCHHHHHHHh-ccCcccc-chHHHHHHHHHHHHHHHHHCCCCEEEEcCCCCHHHH-HHHHHHHHHHH
Confidence 389999999999999887 6665554 222 3355566 24677765544333 66666666555
No 115
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=72.08 E-value=3.7 Score=34.88 Aligned_cols=62 Identities=19% Similarity=0.267 Sum_probs=35.6
Q ss_pred CeEEEEeCCchhHHHHhhhhc---cccC-CCC-HHHHHHHh---h------hccccCCCCchHHHHHHHHHHhhhh
Q 023344 2 NMKIFVDTDADVRLARRIRRD---TVER-GRD-VDSVLEQY---A------DVIIPRGGDNHVAIDLIVQHIHTKL 63 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd---~~~r-gr~-~~~v~~qy---a------D~iip~~~~~~~a~~~i~~~i~~~l 63 (283)
|+.||+|+|.++.+.|-..|. --|. +.+ ++.+.++| | -++|+.+...+.-.+.|.+.|.+.|
T Consensus 133 Dlvi~Ld~~~e~~~~Ri~~R~~~dr~E~~~~~~~~rv~~~y~~l~~~~~~~~~vIDa~~s~eeV~~~I~~~l~~~l 208 (213)
T 4edh_A 133 DLTLVFDLPVEIGLARAAARGRLDRFEQEDRRFFEAVRQTYLQRAAQAPERYQVLDAGLPLAEVQAGLDRLLPNLL 208 (213)
T ss_dssp SEEEEEECCHHHHHHHHCCCSSCCTTTTSCHHHHHHHHHHHHHHHHHCTTTEEEEETTSCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHhcCCcCcccccHHHHHHHHHHHHHHHHHHCCCcEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 789999999999998877763 2222 111 23444555 2 3566655443333444444454444
No 116
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=71.65 E-value=8.8 Score=31.08 Aligned_cols=56 Identities=16% Similarity=0.225 Sum_probs=30.5
Q ss_pred eEEEEeCCchhHHHHhhh-hccccCCCCHHHHHHHh---------hhccccCCCCchHHHHHHHHHHh
Q 023344 3 MKIFVDTDADVRLARRIR-RDTVERGRDVDSVLEQY---------ADVIIPRGGDNHVAIDLIVQHIH 60 (283)
Q Consensus 3 ~~ifv~~~~d~~l~rr~~-rd~~~rgr~~~~v~~qy---------aD~iip~~~~~~~a~~~i~~~i~ 60 (283)
..||+..++...+.+|+. |+. +.-..+..-+..+ ||+||.|+ +.+.+.+.+.+.|.
T Consensus 120 ~~v~~~~~~~e~l~~Rl~~R~~-~~~~~i~~rl~~~~~~~~~~~~~d~vi~n~-~~~~~~~~l~~~i~ 185 (205)
T 3tr0_A 120 LSIFILPPSIEALRERLIKRRQ-DDTAIIEQRLALAREEMAHYKEFDYLVVND-NFDQAVQNLIHIIS 185 (205)
T ss_dssp EEEEEECSCHHHHHHHHHTCTT-SCSSTHHHHHHHHHHHHTTGGGCSEEEECS-SHHHHHHHHHHHHH
T ss_pred EEEEEECcCHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHHhcccCCCEEEECC-CHHHHHHHHHHHHH
Confidence 468998876666666664 321 1112222222221 89999876 44445555555444
No 117
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*
Probab=69.68 E-value=10 Score=32.08 Aligned_cols=21 Identities=24% Similarity=0.547 Sum_probs=18.6
Q ss_pred CeEEEEeCCchhHHHHhhhhc
Q 023344 2 NMKIFVDTDADVRLARRIRRD 22 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd 22 (283)
|+.||+|+|.++.+.|...|.
T Consensus 134 Dl~i~Ldv~~e~~~~Ri~~R~ 154 (213)
T 4tmk_A 134 DLTLYLDVTPEVGLKRARARG 154 (213)
T ss_dssp SEEEEEECCHHHHHHHHHHHS
T ss_pred CEEEEEeCCHHHHHHHHHhcC
Confidence 889999999999998887773
No 118
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=65.09 E-value=6.4 Score=31.72 Aligned_cols=60 Identities=7% Similarity=0.211 Sum_probs=33.0
Q ss_pred CeEEEEeCCchhHHHHhhhhcc-----ccCCCCHHHHHHHh-----hhccccCC-CCchHHHHHHHHHHhhh
Q 023344 2 NMKIFVDTDADVRLARRIRRDT-----VERGRDVDSVLEQY-----ADVIIPRG-GDNHVAIDLIVQHIHTK 62 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~-----~~rgr~~~~v~~qy-----aD~iip~~-~~~~~a~~~i~~~i~~~ 62 (283)
++.||+++|.++++.|- .++. .+.-..+..+...| +|++|+.+ .......+.|.+.+.+.
T Consensus 114 ~~~v~L~~~~e~~~~R~-~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~Id~~~~~~~ev~~~I~~~l~~~ 184 (186)
T 2yvu_A 114 FLEIYVKASLEEVIRRD-PKGLYKKALKGELENFTGITDPYEPPENPQLVLDTESNTIEHNVSYLYSLVKAV 184 (186)
T ss_dssp EEEEEEECCHHHHHHHC-HHHHHHHHHTTCCSSCHHHHSCCCCCSSCSEEEETTTSCHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCHHHHHHhh-hhhhhhHHhhcchhhhhhhhhcccCCCCCcEEEECCCCCHHHHHHHHHHHHHHh
Confidence 46799999999887763 2221 11112233333334 78888865 33334455555555443
No 119
>3hjn_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynth nucleotide-binding, transferase, structural genomics; HET: ADP TYD; 2.10A {Thermotoga maritima}
Probab=65.04 E-value=4.6 Score=33.72 Aligned_cols=36 Identities=22% Similarity=0.462 Sum_probs=23.0
Q ss_pred CeEEEEeCCchhHHHHhhhhccccCCCCHHHHHHHh
Q 023344 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQY 37 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~~qy 37 (283)
|+.+|+|.|.++.+.|+-.||--|..--++.|.+.|
T Consensus 123 Dl~i~Ld~~~e~~~~R~~~~dr~e~~ef~~rv~~~y 158 (197)
T 3hjn_A 123 DLTFYIDVDVETALKRKGELNRFEKREFLERVREGY 158 (197)
T ss_dssp SEEEEEECCHHHHHHHC---CTTCCHHHHHHHHHHH
T ss_pred CceeecCcChHHHHHhCcCcCccccHHHHHHHHHHH
Confidence 889999999999999987766443322233455555
No 120
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=64.05 E-value=7.7 Score=32.23 Aligned_cols=21 Identities=19% Similarity=0.368 Sum_probs=18.0
Q ss_pred CeEEEEeCCchhHHHHhhhhc
Q 023344 2 NMKIFVDTDADVRLARRIRRD 22 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd 22 (283)
|+.||++++.++.+.|...|.
T Consensus 110 ~~vi~L~~~~~~~~~R~~~r~ 130 (222)
T 1zak_A 110 DTFILLDVPDELLVERVVGRR 130 (222)
T ss_dssp SEEEEEECCHHHHHHHHTTEE
T ss_pred CEEEEEECCHHHHHHHHHcCC
Confidence 789999999999988876664
No 121
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=64.02 E-value=15 Score=31.22 Aligned_cols=62 Identities=19% Similarity=0.261 Sum_probs=34.8
Q ss_pred CeEEEEeCCchhHHHHhhhhccccCCCC-------HHHHHHHh---h------hccccCCCCchHHHHHHHHHHhhhhc
Q 023344 2 NMKIFVDTDADVRLARRIRRDTVERGRD-------VDSVLEQY---A------DVIIPRGGDNHVAIDLIVQHIHTKLG 64 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~~~rgr~-------~~~v~~qy---a------D~iip~~~~~~~a~~~i~~~i~~~l~ 64 (283)
|+.||+++|.++.+.|...|.- +.+|. .+.+..+| | -++|+++...+...+.|.+.|.+.|.
T Consensus 150 d~vi~L~~~~e~~~~R~~~R~~-~~dr~e~~~~~~~~rv~~~y~~l~~~~~~~~~vIDa~~s~eev~~~I~~~l~~~l~ 227 (229)
T 4eaq_A 150 DLTIYLNVSAEVGRERIIKNSR-DQNRLDQEDLKFHEKVIEGYQEIIHNESQRFKSVNADQPLENVVEDTYQTIIKYLE 227 (229)
T ss_dssp SEEEEEECCHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHTTTCTTTEEEEETTSCHHHHHHHHHHHHHHHHT
T ss_pred CEEEEEeCCHHHHHHHHHhcCC-CccchhhhhHHHHHHHHHHHHHHHHhCCCCEEEEeCCCCHHHHHHHHHHHHHHHhc
Confidence 7899999999998888766632 12221 11233344 2 25676655555555555555555543
No 122
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana}
Probab=63.58 E-value=9.4 Score=33.25 Aligned_cols=19 Identities=16% Similarity=0.260 Sum_probs=15.4
Q ss_pred CeEEEEeCCchhHHHHhhh
Q 023344 2 NMKIFVDTDADVRLARRIR 20 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~ 20 (283)
+++||++++.++++.|...
T Consensus 143 ~~vV~L~a~~e~l~~Rl~~ 161 (250)
T 3nwj_A 143 GISIWLDVPLEALAHRIAA 161 (250)
T ss_dssp SEEEEEECCHHHHHHHHHC
T ss_pred CcEEEEECCHHHHHHHHhh
Confidence 5789999999987776554
No 123
>4hlc_A DTMP kinase, thymidylate kinase; TMK, MRSA, pipiridine, transfera transferase inhibitor complex; HET: T05; 1.55A {Staphylococcus aureus subsp} PDB: 2cck_A 4gfd_A* 4gsy_A* 4hdc_A* 4hej_A* 2ccj_A* 4hld_A* 2ccg_A*
Probab=63.18 E-value=14 Score=30.91 Aligned_cols=21 Identities=24% Similarity=0.537 Sum_probs=16.8
Q ss_pred CeEEEEeCCchhHHHHhhhhc
Q 023344 2 NMKIFVDTDADVRLARRIRRD 22 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd 22 (283)
|+.||+|.|.++.+.|-..|.
T Consensus 126 Dl~i~Ld~~~e~~~~Ri~~r~ 146 (205)
T 4hlc_A 126 DLTIYLNVSAEVGRERIIKNS 146 (205)
T ss_dssp SEEEEEECCHHHHHHHHHC--
T ss_pred CEEeeeCCCHHHHHHHHHhcC
Confidence 899999999999998765553
No 124
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=63.08 E-value=8.7 Score=31.10 Aligned_cols=21 Identities=14% Similarity=0.447 Sum_probs=17.3
Q ss_pred CeEEEEeCCchhHHHHhh-hhc
Q 023344 2 NMKIFVDTDADVRLARRI-RRD 22 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~-~rd 22 (283)
|+.||+++|.++++.|-. .|.
T Consensus 123 ~~vi~l~~~~e~~~~Rl~~~R~ 144 (213)
T 2plr_A 123 DITFYIRVSPDIALERIKKSKR 144 (213)
T ss_dssp SEEEEEECCHHHHHHHHHHTTC
T ss_pred CEEEEEeCCHHHHHHHHhcccc
Confidence 678999999998887766 565
No 125
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=61.94 E-value=8.3 Score=30.83 Aligned_cols=63 Identities=16% Similarity=0.202 Sum_probs=35.9
Q ss_pred CeEEEEeCCchhHHHHhhhhccc-cCC--C----CHH--HHHHHh----------hhccccCCCCchHHHHHHHHHHhhh
Q 023344 2 NMKIFVDTDADVRLARRIRRDTV-ERG--R----DVD--SVLEQY----------ADVIIPRGGDNHVAIDLIVQHIHTK 62 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~~-~rg--r----~~~--~v~~qy----------aD~iip~~~~~~~a~~~i~~~i~~~ 62 (283)
++.||+++|.++++.|-..|.-. +|. . ..+ .+...| ++++|+.+......++.+.+.|.+.
T Consensus 106 ~~~v~l~~~~e~~~~R~~~R~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Idt~~~~~~~~~~i~~~i~~~ 185 (193)
T 2rhm_A 106 PIQIRCVASGDVLVERILSRIAQGARHPGHCDDRSPADLELVRSRGDIPPLPLGGPLLTVDTTFPEQIDMNAIVQWVRQH 185 (193)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHTTCC--------CHHHHHHHHHSCCCCCCCCCSCEEEEECSSGGGCCHHHHHHHHHHH
T ss_pred EEEEEEeCCHHHHHHHHHHhcCccccCcccccCccCcchhhHHHHhcCCCccCCCCEEEEeCCCCcccCHHHHHHHHHHH
Confidence 36799999999888776666531 221 1 111 122222 5677766554444456666677665
Q ss_pred hc
Q 023344 63 LG 64 (283)
Q Consensus 63 l~ 64 (283)
|.
T Consensus 186 l~ 187 (193)
T 2rhm_A 186 LQ 187 (193)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 126
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=61.40 E-value=13 Score=30.12 Aligned_cols=20 Identities=20% Similarity=0.185 Sum_probs=16.9
Q ss_pred CeEEEEeCCchhHHHHhhhh
Q 023344 2 NMKIFVDTDADVRLARRIRR 21 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~r 21 (283)
|+.||+++|.++++.|-..|
T Consensus 128 ~~vi~l~~~~e~~~~Rl~~R 147 (201)
T 2cdn_A 128 DAVLEFRVSEEVLLERLKGR 147 (201)
T ss_dssp CEEEEEECCHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHcC
Confidence 67899999999888776665
No 127
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=61.37 E-value=17 Score=28.66 Aligned_cols=20 Identities=30% Similarity=0.285 Sum_probs=16.7
Q ss_pred eEEEEeCCchhHHHHhhhhc
Q 023344 3 MKIFVDTDADVRLARRIRRD 22 (283)
Q Consensus 3 ~~ifv~~~~d~~l~rr~~rd 22 (283)
..||+++|.++++.|-..|+
T Consensus 106 ~vv~l~~~~e~~~~R~~~R~ 125 (175)
T 1knq_A 106 SFIYLKGDFDVIESRLKARK 125 (175)
T ss_dssp EEEEEECCHHHHHHHHHTST
T ss_pred EEEEEECCHHHHHHHHHhcc
Confidence 58999999999888776665
No 128
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=58.25 E-value=18 Score=28.52 Aligned_cols=20 Identities=20% Similarity=0.473 Sum_probs=17.4
Q ss_pred CeEEEEeCCchhHHHHhhhh
Q 023344 2 NMKIFVDTDADVRLARRIRR 21 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~r 21 (283)
|+.||+++|.++++.||+..
T Consensus 117 ~~vi~l~~~~~~~~~rr~~~ 136 (194)
T 1nks_A 117 SVIFLLEADPKIILSRQKRD 136 (194)
T ss_dssp SEEEEEECCHHHHHHHHHHC
T ss_pred CEEEEEeCCHHHHHHHHHhh
Confidence 67899999999999998754
No 129
>1p5z_B DCK, deoxycytidine kinase; nucleoside kinase, P-loop, ARAC, cytarabine, transferase; HET: AR3 ADP; 1.60A {Homo sapiens} SCOP: c.37.1.1 PDB: 1p60_A* 1p61_B* 1p62_B* 2a7q_A* 2qrn_A* 2qro_A* 3exk_A* 3hp1_A* 2no7_A* 2no1_A* 2no6_A* 2no0_A* 2no9_A* 2noa_A* 2zi5_A* 2zi4_A* 2zi6_A* 2zi7_B* 2zia_A* 3kfx_A* ...
Probab=57.99 E-value=19 Score=30.77 Aligned_cols=20 Identities=20% Similarity=0.286 Sum_probs=17.4
Q ss_pred CeEEEEeCCchhHHHHhhhh
Q 023344 2 NMKIFVDTDADVRLARRIRR 21 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~r 21 (283)
|+.||+++|.++++.|...|
T Consensus 176 d~vi~L~~~~e~~~~Ri~~R 195 (263)
T 1p5z_B 176 DGIIYLQATPETCLHRIYLR 195 (263)
T ss_dssp SEEEEEECCHHHHHHHHHHH
T ss_pred CeEEEEECCHHHHHHHHHhc
Confidence 78999999999998887655
No 130
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=57.60 E-value=3.4 Score=33.15 Aligned_cols=61 Identities=15% Similarity=0.239 Sum_probs=32.3
Q ss_pred CeEEEEeCCchhHHHHhhhhccc--cCCC--CHHHHHH-----HhhhccccCCCCchHHHHHHHHHHhhhhcc
Q 023344 2 NMKIFVDTDADVRLARRIRRDTV--ERGR--DVDSVLE-----QYADVIIPRGGDNHVAIDLIVQHIHTKLGQ 65 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~~--~rgr--~~~~v~~-----qyaD~iip~~~~~~~a~~~i~~~i~~~l~~ 65 (283)
++.||+++|.++++.|-..|-.. .+++ ....+.. ++||++|.++..+ ++.+.+.|.+.+.+
T Consensus 106 ~~~i~l~~~~e~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vid~~~~~---~~~~~~~i~~~l~~ 175 (179)
T 2pez_A 106 FFEVFVDAPLHVCEQRDVKGLYKKARAGEIKGFTGIDSEYEKPEAPELVLKTDSCD---VNDCVQQVVELLQE 175 (179)
T ss_dssp EEEEEEECCHHHHHHHCTTSHHHHHHTTSSCSCBTTTBCCCCCSSCSEEEETTTSC---HHHHHHHHHHHHHH
T ss_pred eEEEEEeCCHHHHHHHHhhhhHHHHhcccccccccCCccccCCCCCcEEEECCCCC---HHHHHHHHHHHHHH
Confidence 46799999999998874332100 0111 0011111 2389999875432 34455555555543
No 131
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=57.24 E-value=10 Score=30.63 Aligned_cols=59 Identities=19% Similarity=0.278 Sum_probs=31.9
Q ss_pred CeEEEEeCCchhHHHHhhhh--ccccCCCCHH-HHHHHh---h-----h-ccccCCCCchHHHHHHHHHHhhhhc
Q 023344 2 NMKIFVDTDADVRLARRIRR--DTVERGRDVD-SVLEQY---A-----D-VIIPRGGDNHVAIDLIVQHIHTKLG 64 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~r--d~~~rgr~~~-~v~~qy---a-----D-~iip~~~~~~~a~~~i~~~i~~~l~ 64 (283)
|+.||+++|.++++. .| |-.|+ .+.. .+..+| + + ++|.++...+...+.|.+.+.+.+.
T Consensus 123 d~vi~l~~~~e~~~~---~R~~d~~e~-~~~~~rl~~~y~~~~~~~~~~~~~Id~~~~~~~v~~~i~~~l~~~l~ 193 (204)
T 2v54_A 123 DLVIFLESGSKEINR---NVGEEIYED-VTFQQKVLQEYKKMIEEGDIHWQIISSEFEEDVKKELIKNIVIEAIH 193 (204)
T ss_dssp SEEEEECCCHHHHTT---CCSSSTTCC-SHHHHHHHHHHHHHHTTCSSCEEEECTTSCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHh---hcCcccccH-HHHHHHHHHHHHHHHHhCCCcEEEEECCCCHHHHHHHHHHHHHHHHh
Confidence 788999999998877 34 21121 1222 233445 2 2 6776654444444555555554443
No 132
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=56.33 E-value=49 Score=28.21 Aligned_cols=59 Identities=20% Similarity=0.316 Sum_probs=35.5
Q ss_pred CeEEEEeCCchhHHHHhhhhccccCCCCHHH---HHHHh-----------hhccccCCCCchHHHHHHHHHHhhhhcc
Q 023344 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDS---VLEQY-----------ADVIIPRGGDNHVAIDLIVQHIHTKLGQ 65 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~---v~~qy-----------aD~iip~~~~~~~a~~~i~~~i~~~l~~ 65 (283)
++.||+++|.++++.|-..|. +..+.+. +...| ++++|+.+.. ..++.+.+.|.+.+..
T Consensus 101 ~~vi~l~~~~e~~~~R~~~R~---~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~Id~~~~--~~~~ei~~~I~~~l~~ 173 (260)
T 3a4m_A 101 YAIIYLKASLDVLIRRNIERG---EKIPNEVIKKMYEKFDEPGKKYKWDEPFLIIDTTKD--IDFNEIAKKLIEKSKE 173 (260)
T ss_dssp EEEEEEECCHHHHHHHHHHTT---CSSCHHHHHHHHHHCCCTTSSCGGGCCSEEEETTSC--CCHHHHHHHHHHHHTS
T ss_pred EEEEEEeCCHHHHHHHHHhCC---CCCCHHHHHHHHHHhcCccccCCCCCCEEEEeCCCC--CCHHHHHHHHHhcccC
Confidence 468999999999988866653 2223222 22223 5777776542 1355666666666553
No 133
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=52.05 E-value=4.1 Score=37.55 Aligned_cols=38 Identities=16% Similarity=0.250 Sum_probs=29.4
Q ss_pred EEEe-CCch--hHHHHhhhhccccCCCCHHHHHHHh--------hhccccCCC
Q 023344 5 IFVD-TDAD--VRLARRIRRDTVERGRDVDSVLEQY--------ADVIIPRGG 46 (283)
Q Consensus 5 ifv~-~~~d--~~l~rr~~rd~~~rgr~~~~v~~qy--------aD~iip~~~ 46 (283)
+|++ +|.+ +|+.||+.| ..++|++ ++.|| |..|-|++.
T Consensus 118 ~~~~~~d~~~~~Rlrrrl~r-~~~~G~~---~l~~~L~~vdP~~a~~I~p~d~ 166 (340)
T 3d3q_A 118 FEDESISEDKMKQVKLKLKE-LEHLNNN---KLHEYLASFDKESAKDIHPNNR 166 (340)
T ss_dssp CC---CCHHHHHHHHHHHHT-TSSSCHH---HHHHHHHHHCHHHHHHSCTTCH
T ss_pred ccCCCCChHHHHHHHHHHHH-HHhcCHH---HHHHHHHhhCcHHHhhcCccCc
Confidence 6788 8888 899999999 9999974 67777 778877753
No 134
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=51.82 E-value=34 Score=27.87 Aligned_cols=21 Identities=29% Similarity=0.419 Sum_probs=18.5
Q ss_pred CCeEEEEeCCchhHHHHhhhh
Q 023344 1 MNMKIFVDTDADVRLARRIRR 21 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~r 21 (283)
.|..||+++|.++++.|-..|
T Consensus 107 ~d~vi~l~~~~e~~~~Rl~~R 127 (216)
T 3dl0_A 107 IDYVINIQVDKDVLMERLTGR 127 (216)
T ss_dssp CSEEEEEECCGGGHHHHHHTE
T ss_pred CCEEEEEECCHHHHHHHHHCC
Confidence 368899999999999988888
No 135
>2ocp_A DGK, deoxyguanosine kinase; protein-nucleotide complex, transferase; HET: DTP; 2.80A {Homo sapiens} SCOP: c.37.1.1
Probab=51.66 E-value=39 Score=28.27 Aligned_cols=21 Identities=24% Similarity=0.384 Sum_probs=17.3
Q ss_pred CCeEEEEeCCchhHHHHhhhh
Q 023344 1 MNMKIFVDTDADVRLARRIRR 21 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~r 21 (283)
.|+.||+++|.++++.|-..|
T Consensus 150 pd~~i~l~~~~~~~~~R~~~R 170 (241)
T 2ocp_A 150 LHGFIYLQASPQVCLKRLYQR 170 (241)
T ss_dssp CCEEEEEECCHHHHHHHHHHS
T ss_pred CCEEEEEECCHHHHHHHHHhc
Confidence 378999999999998885544
No 136
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=51.28 E-value=20 Score=31.02 Aligned_cols=78 Identities=14% Similarity=0.140 Sum_probs=48.5
Q ss_pred cchHHHHHHHHhccCceeeeEEEEecCCCCceeEe---ccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccE
Q 023344 152 SGESMENALRACCKGIKIGKILIHRDGDNGKQLIY---EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHI 228 (283)
Q Consensus 152 aG~~m~~~l~~~~p~a~~G~i~i~R~~~t~~~~~y---~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I 228 (283)
+|+..++.+++.+|+... +|+ ...|-.-+.. =.-..-+..+++.|.++|+ +-|
T Consensus 11 GGltv~~~l~~~lP~~~~--------------iy~~D~~~~Pyg~~s~--------~~i~~~~~~~~~~L~~~g~--d~i 66 (255)
T 2jfz_A 11 GGFSVLKSLLKARLFDEI--------------IYYGDSARVPYGTKDP--------TTIKQFGLEALDFFKPHEI--ELL 66 (255)
T ss_dssp TTHHHHHHHHHTTCCSEE--------------EEEECTTTCCCTTSCH--------HHHHHHHHHHHHHHGGGCC--SCE
T ss_pred cHHHHHHHHHHHCCCCCE--------------EEEeCCCCCCCCCCCH--------HHHHHHHHHHHHHHHHCCC--CEE
Confidence 577789999999998776 233 2444222211 0114556677788888898 445
Q ss_pred EEEEEeeCHHHHHHHHHhCCCcEEEE
Q 023344 229 IFLNLISAPEGIHCVCKRFPSLKIVT 254 (283)
Q Consensus 229 ~~v~~vas~~gl~~l~~~~P~v~I~t 254 (283)
++.|--++.-+++.+.+.+ ++.|+.
T Consensus 67 viaCNTa~~~~~~~lr~~~-~iPvig 91 (255)
T 2jfz_A 67 IVACNTASALALEEMQKYS-KIPIVG 91 (255)
T ss_dssp EECCHHHHHHTHHHHHHHC-SSCEEC
T ss_pred EEeCchhhHHHHHHHHHhC-CCCEEe
Confidence 5555444434889998887 465554
No 137
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=46.80 E-value=31 Score=27.10 Aligned_cols=18 Identities=22% Similarity=0.145 Sum_probs=14.7
Q ss_pred EEEeCCchhHHHHhhhhc
Q 023344 5 IFVDTDADVRLARRIRRD 22 (283)
Q Consensus 5 ifv~~~~d~~l~rr~~rd 22 (283)
||+++|.++++.|-..|.
T Consensus 109 i~l~~~~e~~~~R~~~R~ 126 (183)
T 2vli_A 109 FTLIAPLNVVLERLRRDG 126 (183)
T ss_dssp EEEECCHHHHHHHHHTC-
T ss_pred EEEeCCHHHHHHHHHhcc
Confidence 999999999888876664
No 138
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=46.77 E-value=27 Score=29.87 Aligned_cols=21 Identities=19% Similarity=0.324 Sum_probs=18.3
Q ss_pred CeEEEEeCCchhHHHHhhhhc
Q 023344 2 NMKIFVDTDADVRLARRIRRD 22 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd 22 (283)
|+.||+|+|.++.+.|-..|.
T Consensus 153 Dl~I~Ldv~~e~~~~Ri~~R~ 173 (227)
T 3v9p_A 153 DLTVLFDVPPQIASARRGAVR 173 (227)
T ss_dssp SEEEEEECCSSCGGGTTTCCC
T ss_pred CEEEEEeCCHHHHHHHHHhcc
Confidence 789999999999998877763
No 139
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=45.84 E-value=18 Score=30.15 Aligned_cols=18 Identities=28% Similarity=0.412 Sum_probs=11.8
Q ss_pred eEEEEeCCchhHHHHhhh
Q 023344 3 MKIFVDTDADVRLARRIR 20 (283)
Q Consensus 3 ~~ifv~~~~d~~l~rr~~ 20 (283)
..||+..+....+.+|+.
T Consensus 142 ~~v~v~~~~~~~l~~Rl~ 159 (231)
T 3lnc_A 142 VSIFIMPPSMEELRRRLC 159 (231)
T ss_dssp EEEEEECSCHHHHHHC--
T ss_pred EEEEEECCcHHHHHHHHH
Confidence 368888877777777763
No 140
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=43.34 E-value=1.1e+02 Score=27.71 Aligned_cols=79 Identities=16% Similarity=0.225 Sum_probs=56.5
Q ss_pred cccchHHHHHHHHhccCceeeeEEEEecCCCCceeEeccCCCCCCCcEEEEEcCcccchH----HHHHHHHHHHHcCCCC
Q 023344 150 VRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGN----SANQAIQLLIEKGVPE 225 (283)
Q Consensus 150 lRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~----t~~~ai~~L~~~G~~e 225 (283)
..+...+.+.+.+.+ +.++|.+.+.|=... +.|.++++++.|+.|+++=+....-+ -+...++.+++.|+
T Consensus 13 g~~~~~La~~ia~~l-g~~l~~~~~~~F~dG---E~~v~i~esvrg~dV~iiqs~~~p~nd~lmeLl~~idA~k~asA-- 86 (319)
T 3dah_A 13 GNANPALAQEVVKIL-GIPLGKAMVSRFSDG---EIQVEIQENVRGKDVFVLQSTCAPTNDNLMELMIMVDALKRASA-- 86 (319)
T ss_dssp CSSCHHHHHHHHHHH-TSCCCCEEEEECTTS---CEEEEECSCCBTCEEEEECCCCSSHHHHHHHHHHHHHHHHHTTB--
T ss_pred CCCCHHHHHHHHHHh-CCceeeeEEEECCCC---CEEEEECCCcCCCeEEEEccCCCCCcHHHHHHHHHHHHHHHcCC--
Confidence 456667777776665 567777777654332 34777888999999999977665433 25567788899998
Q ss_pred ccEEEEEEe
Q 023344 226 SHIIFLNLI 234 (283)
Q Consensus 226 ~~I~~v~~v 234 (283)
++|.++.+.
T Consensus 87 ~rIt~ViPY 95 (319)
T 3dah_A 87 GRITAAIPY 95 (319)
T ss_dssp SEEEEEESS
T ss_pred cEEEEEccC
Confidence 799888754
No 141
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=42.84 E-value=58 Score=23.63 Aligned_cols=47 Identities=21% Similarity=0.249 Sum_probs=35.2
Q ss_pred CCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHHHHHHHHhCCCc
Q 023344 194 SERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSL 250 (283)
Q Consensus 194 ~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~gl~~l~~~~P~v 250 (283)
+++.|++++ .+|.....|...|++.|. +++..+ ..|+....++.+.+
T Consensus 51 ~~~~ivvyc---~~g~rs~~a~~~L~~~G~--~~v~~l-----~GG~~~W~~~g~~~ 97 (106)
T 3hix_A 51 KSRDIYVYG---AGDEQTSQAVNLLRSAGF--EHVSEL-----KGGLAAWKAIGGPT 97 (106)
T ss_dssp TTSCEEEEC---SSHHHHHHHHHHHHHTTC--SCEEEC-----TTHHHHHHHTTCCE
T ss_pred CCCeEEEEE---CCCChHHHHHHHHHHcCC--cCEEEe-----cCCHHHHHHCCCCC
Confidence 356677775 579999999999999999 566432 57888888776543
No 142
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=41.51 E-value=33 Score=27.91 Aligned_cols=21 Identities=10% Similarity=0.248 Sum_probs=18.3
Q ss_pred CCeEEEEeCCchhHHHHhhhh
Q 023344 1 MNMKIFVDTDADVRLARRIRR 21 (283)
Q Consensus 1 ~d~~ifv~~~~d~~l~rr~~r 21 (283)
+|..||+++|.++++.|-..|
T Consensus 107 ~d~vi~l~~~~e~~~~Rl~~R 127 (216)
T 3fb4_A 107 LDYVLNIKVEQEELMKRLTGR 127 (216)
T ss_dssp CSEEEEEECCHHHHHHHHHSE
T ss_pred CCEEEEEECCHHHHHHHHHcC
Confidence 368899999999999888877
No 143
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=40.52 E-value=44 Score=29.37 Aligned_cols=55 Identities=16% Similarity=0.307 Sum_probs=37.5
Q ss_pred CCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEE-ee-CHHHHHHHHHhCCCcEE
Q 023344 192 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNL-IS-APEGIHCVCKRFPSLKI 252 (283)
Q Consensus 192 ~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~-va-s~~gl~~l~~~~P~v~I 252 (283)
+.++++++| +.+||++.+++-.|.+.|+ ++|.+++- .. +.+=.+.+...||...+
T Consensus 122 ~~~~~~~li----lGaGGaarai~~aL~~~g~--~~i~i~nRt~~ra~~la~~~~~~~~~~~~ 178 (269)
T 3tum_A 122 EPAGKRALV----IGCGGVGSAIAYALAEAGI--ASITLCDPSTARMGAVCELLGNGFPGLTV 178 (269)
T ss_dssp CCTTCEEEE----ECCSHHHHHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHHCTTCEE
T ss_pred CcccCeEEE----EecHHHHHHHHHHHHHhCC--CeEEEeCCCHHHHHHHHHHHhccCCccee
Confidence 456788875 5789999999999999998 57766652 11 12223445566776554
No 144
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=40.13 E-value=12 Score=30.53 Aligned_cols=62 Identities=16% Similarity=0.253 Sum_probs=32.3
Q ss_pred eEEEEeCCchhHHHHhhhhcccc--CCC--CHHHHHHHh-----hhccccCCCCchHHHHHHHHHHhhhhccc
Q 023344 3 MKIFVDTDADVRLARRIRRDTVE--RGR--DVDSVLEQY-----ADVIIPRGGDNHVAIDLIVQHIHTKLGQH 66 (283)
Q Consensus 3 ~~ifv~~~~d~~l~rr~~rd~~~--rgr--~~~~v~~qy-----aD~iip~~~~~~~a~~~i~~~i~~~l~~~ 66 (283)
+.||++++.+++..|+-..-..+ +|. +...+-.+| +|++|..+.. ..++.+++.|.+.|.++
T Consensus 125 ~~v~L~a~~e~~~~R~~~~l~~~~r~~~~~~~~~~~~~~~~~~~~~~~idt~~~--~~~~e~v~~i~~~l~~~ 195 (200)
T 3uie_A 125 VEVFMDVPLSVCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEISLGREGG--TSPIEMAEKVVGYLDNK 195 (200)
T ss_dssp EEEEECCCHHHHHHHCTTSHHHHHHTTSSCSCBTTTBCCCCCSSCSEEECCSSC--CCHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHhcccchHHHHhcCCCCCCCCCCCcCcCCCCCCEEEecCCC--CCHHHHHHHHHHHHHHc
Confidence 46999999999988862111000 111 111222334 7888876531 12445555555555443
No 145
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=39.77 E-value=9.4 Score=31.52 Aligned_cols=62 Identities=16% Similarity=0.276 Sum_probs=33.0
Q ss_pred CeEEEEeCCchhHHHHhhhhccccCCC-----CHHHHHHHh-----hhccccCCCCchHHHHHHHHHHhhhhcccc
Q 023344 2 NMKIFVDTDADVRLARRIRRDTVERGR-----DVDSVLEQY-----ADVIIPRGGDNHVAIDLIVQHIHTKLGQHD 67 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~~~rgr-----~~~~v~~qy-----aD~iip~~~~~~~a~~~i~~~i~~~l~~~~ 67 (283)
++.||+++|.++++.|. .|+..++.| ..+.+..+| +|++|+.+.. .++.+.+.|.+.+.+++
T Consensus 133 ~~vi~Ld~~~e~~~~R~-~r~~~~~~r~~~~~~~~~~~~~y~~~~~~~~~IDt~~~---s~eev~~~I~~~l~~~~ 204 (211)
T 1m7g_A 133 FVEVYVDVPVEVAEQRD-PKGLYKKAREGVIKEFTGISAPYEAPANPEVHVKNYEL---PVQDAVKQIIDYLDTKG 204 (211)
T ss_dssp EEEEEEECCHHHHHTSC-TTCHHHHHHHTSSSSCBTTTBCCCCCSSCSEEEECSSS---CHHHHHHHHHHHHHHTT
T ss_pred eEEEEEeCCHHHHHHhh-hHHHHHHHHhcchhhhhhhhhhccCCCCCeEEEECCCC---CHHHHHHHHHHHHHHcC
Confidence 57899999999988772 221111000 001111233 6888876541 24455556655555444
No 146
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=39.69 E-value=18 Score=31.83 Aligned_cols=82 Identities=16% Similarity=0.167 Sum_probs=50.8
Q ss_pred cchHHHHHHHHhccCceeeeEEEEecCCCCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEE
Q 023344 152 SGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFL 231 (283)
Q Consensus 152 aG~~m~~~l~~~~p~a~~G~i~i~R~~~t~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v 231 (283)
+|+.-++.+++.+|...+- -+.- -...|-..+...- -..-+..+++.|.++|+ +-|+++
T Consensus 18 GGLtv~~~i~~~lp~~~~i--y~~D---------~a~~PYG~~~~~~--------i~~~~~~~~~~L~~~g~--~~iVIA 76 (268)
T 3out_A 18 GGLTIVKNLMSILPNEDII--YFGD---------IARIPYGTKSRAT--------IQKFAAQTAKFLIDQEV--KAIIIA 76 (268)
T ss_dssp TTHHHHHHHHHHCTTCCEE--EEEC---------TTTCCCTTSCHHH--------HHHHHHHHHHHHHHTTC--SEEEEC
T ss_pred ChHHHHHHHHHHCCCCcEE--EecC---------CCCCCCCCCCHHH--------HHHHHHHHHHHHHHCCC--CEEEEe
Confidence 4666788889999988862 1111 1345533322110 12344567889999998 455555
Q ss_pred EEeeCHHHHHHHHHhCCCcEEEE
Q 023344 232 NLISAPEGIHCVCKRFPSLKIVT 254 (283)
Q Consensus 232 ~~vas~~gl~~l~~~~P~v~I~t 254 (283)
|==++.-+++.+.+.+|++.|+-
T Consensus 77 CNTa~~~al~~lr~~~~~iPvig 99 (268)
T 3out_A 77 CNTISAIAKDIVQEIAKAIPVID 99 (268)
T ss_dssp CHHHHHHHHHHHHHHHTTSCEEE
T ss_pred CCChHHHHHHHHHHhcCCCCEEe
Confidence 54455568999999987777654
No 147
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=39.18 E-value=55 Score=25.69 Aligned_cols=21 Identities=19% Similarity=0.260 Sum_probs=17.5
Q ss_pred CeEEEEeCCchhHHHHhhhhc
Q 023344 2 NMKIFVDTDADVRLARRIRRD 22 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd 22 (283)
|+.||+++|.++++.|-..|+
T Consensus 107 ~~vi~l~~~~e~~~~R~~~R~ 127 (186)
T 3cm0_A 107 LGVVLVEVPEEELVRRILRRA 127 (186)
T ss_dssp EEEEEEECCHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHhcc
Confidence 578999999999888777774
No 148
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=37.85 E-value=61 Score=27.50 Aligned_cols=57 Identities=14% Similarity=0.197 Sum_probs=35.9
Q ss_pred cEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeC------HHHHHHHHHhCCCcEEEEEee
Q 023344 196 RHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISA------PEGIHCVCKRFPSLKIVTSEI 257 (283)
Q Consensus 196 ~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas------~~gl~~l~~~~P~v~I~ta~i 257 (283)
..++|+||... ......++.|++. ...++|.. ++.+ -.|+..+.++||+++||+..-
T Consensus 51 ~~~iLID~G~~--~~~~~~~~~l~~~-~~~~~i~~--IilTH~H~DH~gg~~~l~~~~~~~~v~~~~~ 113 (262)
T 3hnn_A 51 DKTAIIDPPVE--SFMKIYLEALQQT-VNLKKLDY--VILGHFSPNRIPTFKALLELAPQITFVCSLP 113 (262)
T ss_dssp SSEEEECCCCH--HHHHHHHHHHHHH-SCGGGEEE--EECSSCCGGGHHHHHHHHHHCTTCEEEECHH
T ss_pred CCEEEEECCCc--chHHHHHHHHHHh-CChhhCCE--EEECCCCcchhchHHHHHHHCCCCEEEECHH
Confidence 35899999754 3333444555554 22245532 3333 458999999999999998643
No 149
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=36.72 E-value=50 Score=23.98 Aligned_cols=45 Identities=24% Similarity=0.436 Sum_probs=33.1
Q ss_pred CCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHHHHHHHHhCC
Q 023344 194 SERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFP 248 (283)
Q Consensus 194 ~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~gl~~l~~~~P 248 (283)
+++.|+++. .+|.....|...|++.|. +++..+ ..|++...+++|
T Consensus 57 ~~~~ivvyc---~~g~rs~~a~~~L~~~G~--~~v~~l-----~GG~~~W~~~~p 101 (108)
T 1gmx_A 57 FDTPVMVMC---YHGNSSKGAAQYLLQQGY--DVVYSI-----DGGFEAWQRQFP 101 (108)
T ss_dssp TTSCEEEEC---SSSSHHHHHHHHHHHHTC--SSEEEE-----TTHHHHHHHHCG
T ss_pred CCCCEEEEc---CCCchHHHHHHHHHHcCC--ceEEEe-----cCCHHHHHHhCC
Confidence 356677775 578888899999999998 566533 467777766666
No 150
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=35.94 E-value=60 Score=22.36 Aligned_cols=33 Identities=24% Similarity=0.307 Sum_probs=25.1
Q ss_pred CCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEE
Q 023344 194 SERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFL 231 (283)
Q Consensus 194 ~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v 231 (283)
+++.|+++. .+|.....|...|++.|. +++..+
T Consensus 40 ~~~~ivv~C---~~g~rs~~aa~~L~~~G~--~~v~~l 72 (85)
T 2jtq_A 40 KNDTVKVYC---NAGRQSGQAKEILSEMGY--THVENA 72 (85)
T ss_dssp TTSEEEEEE---SSSHHHHHHHHHHHHTTC--SSEEEE
T ss_pred CCCcEEEEc---CCCchHHHHHHHHHHcCC--CCEEec
Confidence 456777765 568888899999999998 566543
No 151
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=35.69 E-value=45 Score=29.41 Aligned_cols=35 Identities=17% Similarity=0.303 Sum_probs=27.8
Q ss_pred CCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEE
Q 023344 192 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLN 232 (283)
Q Consensus 192 ~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~ 232 (283)
++++++|+|+ .+|+...+++..|.+.|+ ++|++++
T Consensus 124 ~l~~k~vlVl----GaGG~g~aia~~L~~~G~--~~v~i~~ 158 (283)
T 3jyo_A 124 NAKLDSVVQV----GAGGVGNAVAYALVTHGV--QKLQVAD 158 (283)
T ss_dssp TCCCSEEEEE----CCSHHHHHHHHHHHHTTC--SEEEEEC
T ss_pred CcCCCEEEEE----CCcHHHHHHHHHHHHCCC--CEEEEEE
Confidence 4678999876 458999999999999998 5676553
No 152
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=34.75 E-value=1.6e+02 Score=24.28 Aligned_cols=55 Identities=15% Similarity=0.372 Sum_probs=35.5
Q ss_pred CCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHHHHHHHHhCCCcEE
Q 023344 193 ISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKI 252 (283)
Q Consensus 193 i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~gl~~l~~~~P~v~I 252 (283)
+++++|+|. -+||+-=.+..+.|.+.|. ++++++.--..++.++.+.+.++..++
T Consensus 3 l~~k~vlVt---Gas~gIG~~~a~~l~~~G~--~~v~~~~r~~~~~~~~~l~~~~~~~~~ 57 (254)
T 1sby_A 3 LTNKNVIFV---AALGGIGLDTSRELVKRNL--KNFVILDRVENPTALAELKAINPKVNI 57 (254)
T ss_dssp CTTCEEEEE---TTTSHHHHHHHHHHHHTCC--SEEEEEESSCCHHHHHHHHHHCTTSEE
T ss_pred CCCcEEEEE---CCCChHHHHHHHHHHHCCC--cEEEEEecCchHHHHHHHHHhCCCceE
Confidence 567888876 4567767777888888887 335444322223677888777764443
No 153
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=34.71 E-value=52 Score=29.57 Aligned_cols=35 Identities=23% Similarity=0.394 Sum_probs=28.9
Q ss_pred CCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEE
Q 023344 192 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLN 232 (283)
Q Consensus 192 ~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~ 232 (283)
++++++++|+ .+|++..+++..|.+.|+ ++|.+++
T Consensus 145 ~l~gk~~lVl----GAGGaaraia~~L~~~G~--~~v~v~n 179 (312)
T 3t4e_A 145 DMRGKTMVLL----GAGGAATAIGAQAAIEGI--KEIKLFN 179 (312)
T ss_dssp CCTTCEEEEE----CCSHHHHHHHHHHHHTTC--SEEEEEE
T ss_pred CcCCCEEEEE----CcCHHHHHHHHHHHHcCC--CEEEEEE
Confidence 4678999876 569999999999999998 5776665
No 154
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=32.93 E-value=72 Score=27.22 Aligned_cols=56 Identities=20% Similarity=0.296 Sum_probs=39.7
Q ss_pred CCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHHHHHHHHhCCCcEEEEE
Q 023344 191 NDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTS 255 (283)
Q Consensus 191 ~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~gl~~l~~~~P~v~I~ta 255 (283)
-+++|++|+|+ ..|......++.|.+.|+ +|++++.=.+ +.++.+.+. .+++++..
T Consensus 27 l~L~gk~VLVV----GgG~va~~ka~~Ll~~GA---~VtVvap~~~-~~l~~l~~~-~~i~~i~~ 82 (223)
T 3dfz_A 27 LDLKGRSVLVV----GGGTIATRRIKGFLQEGA---AITVVAPTVS-AEINEWEAK-GQLRVKRK 82 (223)
T ss_dssp ECCTTCCEEEE----CCSHHHHHHHHHHGGGCC---CEEEECSSCC-HHHHHHHHT-TSCEEECS
T ss_pred EEcCCCEEEEE----CCCHHHHHHHHHHHHCCC---EEEEECCCCC-HHHHHHHHc-CCcEEEEC
Confidence 36789999976 678999999999999997 5776665333 347777654 35554433
No 155
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=32.74 E-value=55 Score=26.95 Aligned_cols=52 Identities=19% Similarity=0.328 Sum_probs=32.1
Q ss_pred eEEEEeCCchhHHHHhhhhccccCCCCHHHHHH-Hh--------------hhccccCCCCchHHHHHHHHHH
Q 023344 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLE-QY--------------ADVIIPRGGDNHVAIDLIVQHI 59 (283)
Q Consensus 3 ~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~~-qy--------------aD~iip~~~~~~~a~~~i~~~i 59 (283)
+.|||..++...|.+|+. .||++-++.++ +. -|.||-|. +-+.|++.+.+-|
T Consensus 116 ~~Ifi~pps~e~L~~RL~----~Rg~e~~e~i~~Rl~~a~~e~~~~~~~~fD~vIvNd-dle~a~~~l~~iI 182 (186)
T 1ex7_A 116 RFLFIAPPSVEDLKKRLE----GRGTETEESINKRLSAAQAELAYAETGAHDKVIVND-DLDKAYKELKDFI 182 (186)
T ss_dssp EEEEEECSCHHHHHHHHH----HHCCSCHHHHHHHHHHHHHHHHHHTTTCSSEEEECS-SHHHHHHHHHHHH
T ss_pred eEEEEeCCCHHHHHHHHH----hcCCCCHHHHHHHHHHHHHHHhhccccCCcEEEECc-CHHHHHHHHHHHH
Confidence 469999999999999985 46655444432 22 36666653 3444555554444
No 156
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=32.53 E-value=2.3e+02 Score=24.70 Aligned_cols=77 Identities=13% Similarity=0.242 Sum_probs=52.5
Q ss_pred ccchHHHHHHHHhccCceeeeEEEEecCCCCceeEeccCCCCCCCcEEEEEcCcccc-hH--HHHHHHHHHHHcCCCCcc
Q 023344 151 RSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLAT-GN--SANQAIQLLIEKGVPESH 227 (283)
Q Consensus 151 RaG~~m~~~l~~~~p~a~~G~i~i~R~~~t~~~~~y~~lP~~i~~~~Vil~Dp~iaT-G~--t~~~ai~~L~~~G~~e~~ 227 (283)
.+...+.+.+.+.+ +.++|.+.+.|=.. .+.|.++++++.|+.|+++-+.... .. -+...++.+++.|+ ++
T Consensus 7 ~~~~~la~~ia~~l-~~~l~~~~~~~F~d---GE~~v~i~~~vrg~dv~iiqs~~~pn~~lmell~~~~a~~~~~a--~~ 80 (284)
T 1u9y_A 7 SQSQNLAFKVAKLL-NTKLTRVEYKRFPD---NEIYVRIVDEINDDEAVIINTQKNQNDAIVETILLCDALRDEGV--KK 80 (284)
T ss_dssp TTCHHHHHHHHHHT-TCCEECEEEEECTT---CCEEEEECSCCCSSEEEEECCCSSHHHHHHHHHHHHHHHHTTTC--CE
T ss_pred CCCHHHHHHHHHHh-CCeeeeeEEEECCC---CCEEEEeCCCCCCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCC--ce
Confidence 34445666665543 57777777765322 2357788888999999999887653 11 34556778888888 78
Q ss_pred EEEEEE
Q 023344 228 IIFLNL 233 (283)
Q Consensus 228 I~~v~~ 233 (283)
|.++.+
T Consensus 81 i~~v~P 86 (284)
T 1u9y_A 81 ITLVAP 86 (284)
T ss_dssp EEEECS
T ss_pred EEEEec
Confidence 887774
No 157
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=32.11 E-value=96 Score=26.52 Aligned_cols=52 Identities=17% Similarity=0.354 Sum_probs=36.1
Q ss_pred CcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeC------HHHHHHHHHhCCCcEEEEEe
Q 023344 195 ERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISA------PEGIHCVCKRFPSLKIVTSE 256 (283)
Q Consensus 195 ~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas------~~gl~~l~~~~P~v~I~ta~ 256 (283)
++..+|+||. .+. ..++.|++.|. +| -.++.+ -.|+..+.+.||+++||+..
T Consensus 22 ~~~~vlID~G--~~~---~i~~~l~~~g~---~i--~~IllTH~H~DH~gg~~~l~~~~~~~~v~~~~ 79 (260)
T 1qh5_A 22 TKEAAIVDPV--QPQ---KVVDAARKHGV---KL--TTVLTTHHHWDHAGGNEKLVKLESGLKVYGGD 79 (260)
T ss_dssp TTEEEEESCS--SHH---HHHHHHHHHTC---EE--EEEECCCSSHHHHTTHHHHHHHSTTCEEEESC
T ss_pred CCEEEEEcCC--CHH---HHHHHHHHcCC---Cc--cEEEeCCCCccccCCHHHHHHHCCCCEEEECc
Confidence 4678999996 333 45566777776 23 344443 34888999999999999874
No 158
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=31.91 E-value=79 Score=25.81 Aligned_cols=52 Identities=19% Similarity=0.348 Sum_probs=30.4
Q ss_pred cEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCchh
Q 023344 196 RHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFG 275 (283)
Q Consensus 196 ~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~gl~~l~~~~P~v~I~ta~iD~~ln~~~~ivPGlGd~G 275 (283)
++|.|+|=....=.|+..| |++.|+. +. ++..++-++. -++-|+||-|+++
T Consensus 3 ~~I~iiD~g~~n~~si~~a---l~~~G~~---~~---v~~~~~~l~~--------------------~D~lilPG~g~~~ 53 (211)
T 4gud_A 3 QNVVIIDTGCANISSVKFA---IERLGYA---VT---ISRDPQVVLA--------------------ADKLFLPGVGTAS 53 (211)
T ss_dssp CCEEEECCCCTTHHHHHHH---HHHTTCC---EE---EECCHHHHHH--------------------CSEEEECCCSCHH
T ss_pred CEEEEEECCCChHHHHHHH---HHHCCCE---EE---EECCHHHHhC--------------------CCEEEECCCCCHH
Confidence 4688888544322455554 5667983 22 2345543321 1367999999887
Q ss_pred h
Q 023344 276 D 276 (283)
Q Consensus 276 d 276 (283)
+
T Consensus 54 ~ 54 (211)
T 4gud_A 54 E 54 (211)
T ss_dssp H
T ss_pred H
Confidence 6
No 159
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=31.68 E-value=1.3e+02 Score=25.35 Aligned_cols=56 Identities=25% Similarity=0.453 Sum_probs=38.1
Q ss_pred CcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeC------HHHHHHHHHhCCCcEEEEEeec
Q 023344 195 ERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISA------PEGIHCVCKRFPSLKIVTSEID 258 (283)
Q Consensus 195 ~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas------~~gl~~l~~~~P~v~I~ta~iD 258 (283)
++.++|+||...++. ..++.|++.|. +| -.++.+ -.|+..+.+++|+++||+..-+
T Consensus 27 ~~~~ilID~g~~~~~---~~~~~l~~~g~---~i--~~Il~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~ 88 (245)
T 2gcu_A 27 DKPALLIDPVDKTVD---RDLKLIDELGL---KL--IYAMNTHVHADHVTGTGLLKTKLPGVKSVISKAS 88 (245)
T ss_dssp TCEEEEESCBGGGHH---HHHHHHHHHTC---EE--EEEECSSCCSSSCBSHHHHHHHSTTCEEEEEGGG
T ss_pred CCcEEEEeCCCchHH---HHHHHHHHCCC---ee--eEEEeCCCChhhhhhHHHHHHhCCCCeEEecccc
Confidence 467999999986544 44556667776 23 334433 3478888887999999987544
No 160
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=31.28 E-value=79 Score=24.51 Aligned_cols=54 Identities=19% Similarity=0.086 Sum_probs=28.8
Q ss_pred eEEEEeCCchhHHHHhhhhccccCCCCHHHHHHH------h--hhccccCCCCchHHHHHHHHHHhhhh
Q 023344 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQ------Y--ADVIIPRGGDNHVAIDLIVQHIHTKL 63 (283)
Q Consensus 3 ~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~~q------y--aD~iip~~~~~~~a~~~i~~~i~~~l 63 (283)
..||++++.+++..|-..|. . |.+.....| | ||++|+.+..+ .+.+++.|.+.|
T Consensus 115 ~~v~l~~~~e~l~~R~~~r~--~--~~~~~~~~~~~~~~~~~~~d~~idt~~~~---~~~~~~~I~~~l 176 (178)
T 1qhx_A 115 LWVGVRCDGAVAEGRETARG--D--RVAGMAAKQAYVVHEGVEYDVEVDTTHKE---SIECAWAIAAHV 176 (178)
T ss_dssp EEEEEECCHHHHHHHHHHTS--S--SCTTHHHHHTTGGGTTCCCSEEEETTSSC---HHHHHHHHHTTC
T ss_pred EEEEEECCHHHHHHHHHhhC--C--cccchhhhhchhhccCCCCcEEEECCCCC---HHHHHHHHHHHh
Confidence 35789999887665544442 2 222211122 2 88888765432 334445554443
No 161
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=30.47 E-value=39 Score=29.35 Aligned_cols=82 Identities=11% Similarity=0.118 Sum_probs=47.6
Q ss_pred ccchHHHHHHHHhccCceeeeEEEEecCCCCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEE
Q 023344 151 RSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIF 230 (283)
Q Consensus 151 RaG~~m~~~l~~~~p~a~~G~i~i~R~~~t~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~ 230 (283)
=+|+.+++.+++.+|+...-+ + .| -..+|-..++.. .+ -.-+..+++.|.++|+ +-|++
T Consensus 13 vGGltv~~~i~~~lP~~~~iy--~-~D--------~~~~Pyg~~s~~------~i--~~~~~~~~~~L~~~g~--d~ivi 71 (267)
T 2gzm_A 13 VGGLTVAKELIRQLPKERIIY--L-GD--------TARCPYGPRSRE------EV--RQFTWEMTEHLLDLNI--KMLVI 71 (267)
T ss_dssp STTHHHHHHHHHHCTTSCEEE--E-EC--------TTTCCCTTSCHH------HH--HHHHHHHHHHHHTTTC--SEEEE
T ss_pred ccHHHHHHHHHHHCCCCCEEE--e-cC--------CCCCCCCCCCHH------HH--HHHHHHHHHHHHHCCC--CEEEE
Confidence 357889999999999887621 1 11 123343222211 11 1336677788888888 34444
Q ss_pred EEEeeCHHHHHHHHHhCCCcEEEE
Q 023344 231 LNLISAPEGIHCVCKRFPSLKIVT 254 (283)
Q Consensus 231 v~~vas~~gl~~l~~~~P~v~I~t 254 (283)
.|--++.-+++.+.+.+ ++.|+.
T Consensus 72 aCNTas~~~l~~lr~~~-~iPvig 94 (267)
T 2gzm_A 72 ACNTATAVVLEEMQKQL-PIPVVG 94 (267)
T ss_dssp CCHHHHHHHHHHHHHHC-SSCEEE
T ss_pred eCchhhHHHHHHHHHhC-CCCEEe
Confidence 44333434789998887 455554
No 162
>3ix9_A Dihydrofolate reductase; central beta sheet surrounded by 4 alpha helices, oxidoreductase; HET: NDP MTX; 1.95A {Streptococcus pneumoniae}
Probab=29.06 E-value=1.6e+02 Score=24.31 Aligned_cols=53 Identities=11% Similarity=0.275 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHcCCCCccEEEEEEeeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCchhhhccCC
Q 023344 209 NSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 281 (283)
Q Consensus 209 ~t~~~ai~~L~~~G~~e~~I~~v~~vas~~gl~~l~~~~P~v~I~ta~iD~~ln~~~~ivPGlGd~GdR~fgt 281 (283)
+++..|++.|++.| ++|. ++.+.+=.+.+..... +++.. ++|..|+ ||++|..
T Consensus 101 ~~~~eal~~lk~~~---~~i~---ViGG~~ly~~~l~liD--el~lt-----------~ip~~g~-Gd~lFp~ 153 (190)
T 3ix9_A 101 HDVQSVLDWYSAQE---KNLY---IVGGKQIFQAFEPYLD--EVIVT-----------HIHARVE-GDTYFPA 153 (190)
T ss_dssp SSHHHHHHHHHTSC---SCEE---EEECHHHHHHHGGGCS--EEEEE-----------EESSCCC-CSEECCC
T ss_pred CCHHHHHHHHHhCC---CCEE---EECCHHHHHHHHhhCC--EEEEE-----------EeCcccc-cCCcCCC
Confidence 46888999998763 4554 4456665566654443 34443 4455543 6777753
No 163
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=28.85 E-value=2.8e+02 Score=24.98 Aligned_cols=78 Identities=10% Similarity=0.123 Sum_probs=54.8
Q ss_pred ccchHHHHHHHHhccCceeeeEEEEecCCCCceeEeccCCCCCCCcEEEEEcCcccchH----HHHHHHHHHHHcCCCCc
Q 023344 151 RSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGN----SANQAIQLLIEKGVPES 226 (283)
Q Consensus 151 RaG~~m~~~l~~~~p~a~~G~i~i~R~~~t~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~----t~~~ai~~L~~~G~~e~ 226 (283)
.+...+.+.+.+.+ ++++|.+.+.|=... +.|.++++++.|+.|+++=++...=+ -+...++.+++.|+ +
T Consensus 10 ~~~~~La~~ia~~l-g~~l~~~~~~~F~dG---E~~v~i~esvrg~dV~iiqs~~~p~nd~lmeLl~~idA~k~asA--~ 83 (326)
T 3s5j_B 10 SSHQDLSQKIADRL-GLELGKVVTKKFSNQ---ETCVEIGESVRGEDVYIVQSGCGEINDNLMELLIMINACKIASA--S 83 (326)
T ss_dssp SSCCHHHHHHHHHT-TCCCCCEEEEECTTS---CEEEEECSCCTTCEEEEECCCCSCHHHHHHHHHHHHHHHHHTTC--S
T ss_pred CCCHHHHHHHHHHh-CCceeeeEEeECCCC---CEEEEECCCcCCCcEEEEecCCCCccHHHHHHHHHHHHHHhcCC--c
Confidence 55566777776664 566777777654332 34678888999999999988765422 34456778888898 7
Q ss_pred cEEEEEEe
Q 023344 227 HIIFLNLI 234 (283)
Q Consensus 227 ~I~~v~~v 234 (283)
+|.++.+.
T Consensus 84 rIt~ViPY 91 (326)
T 3s5j_B 84 RVTAVIPC 91 (326)
T ss_dssp EEEEEESS
T ss_pred EEEEeccC
Confidence 89888754
No 164
>2v6z_M DNA polymerase epsilon subunit 2; DNA replication, DPOE2, transferase, AAA protein family; HET: DNA; NMR {Homo sapiens}
Probab=28.74 E-value=42 Score=25.32 Aligned_cols=56 Identities=16% Similarity=0.189 Sum_probs=36.3
Q ss_pred EEEeCCchhHHHHhhhhccccCCCCHHHHHHHh-hhccccCCC-CchHHHHHHHHHHhh
Q 023344 5 IFVDTDADVRLARRIRRDTVERGRDVDSVLEQY-ADVIIPRGG-DNHVAIDLIVQHIHT 61 (283)
Q Consensus 5 ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~~qy-aD~iip~~~-~~~~a~~~i~~~i~~ 61 (283)
+-||.+. .++.++|.+-++-||.++..-.-.| +.++.|-+. +-.-+++.|++.|++
T Consensus 21 ~~~~M~~-~rlrk~I~k~FKL~Gl~Lr~dA~~~L~~~L~~~~~~e~e~~L~~Iid~lqk 78 (99)
T 2v6z_M 21 LQVDMAP-ERLRSRALSAFKLRGLLLRGEAIKYLTEALQSISELELEDKLEKIINAVEK 78 (99)
T ss_dssp ----CCH-HHHHHHHHHHHHHTTCEECHHHHHHHHHHTTTSCTTTHHHHHHHHHHHHTT
T ss_pred hhhcccH-HHHHHHHHHHhhhcceeecHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHh
Confidence 3455554 7999999999999999988766666 777766543 444455555555543
No 165
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=28.33 E-value=79 Score=24.43 Aligned_cols=43 Identities=23% Similarity=0.331 Sum_probs=32.5
Q ss_pred CCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHHHHHHHHh
Q 023344 194 SERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKR 246 (283)
Q Consensus 194 ~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~gl~~l~~~ 246 (283)
+++.|++++ .+|.....|...|++.|. +++..+ ..|+....++
T Consensus 55 ~~~~ivvyC---~~g~rs~~aa~~L~~~G~--~~v~~l-----~GG~~~W~~~ 97 (141)
T 3ilm_A 55 KSRDIYVYG---AGDEQTSQAVNLLRSAGF--EHVSEL-----KGGLAAWKAI 97 (141)
T ss_dssp TTSEEEEEC---SSHHHHHHHHHHHHHTTC--CSEEEC-----TTHHHHHHHT
T ss_pred CCCeEEEEE---CCChHHHHHHHHHHHcCC--CCEEEe-----cCHHHHHHHC
Confidence 356777775 489999999999999999 566432 5678887765
No 166
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=28.16 E-value=1.1e+02 Score=26.58 Aligned_cols=49 Identities=20% Similarity=0.357 Sum_probs=36.0
Q ss_pred CCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHHHHHHHHhCC
Q 023344 192 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFP 248 (283)
Q Consensus 192 ~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~gl~~l~~~~P 248 (283)
++++++++++ .+|+...+++..|.+.|+ ++|.+++ -+++..+++.+.+.
T Consensus 117 ~l~~k~~lvl----GaGg~~~aia~~L~~~G~--~~v~i~~--R~~~~a~~la~~~~ 165 (272)
T 3pwz_A 117 PLRNRRVLLL----GAGGAVRGALLPFLQAGP--SELVIAN--RDMAKALALRNELD 165 (272)
T ss_dssp CCTTSEEEEE----CCSHHHHHHHHHHHHTCC--SEEEEEC--SCHHHHHHHHHHHC
T ss_pred CccCCEEEEE----CccHHHHHHHHHHHHcCC--CEEEEEe--CCHHHHHHHHHHhc
Confidence 4678998875 568999999999999998 5675543 24566677766654
No 167
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=28.16 E-value=1.6e+02 Score=24.85 Aligned_cols=47 Identities=17% Similarity=0.196 Sum_probs=27.1
Q ss_pred cchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHHHHHHHHhCCCcEEEEEe
Q 023344 206 ATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSE 256 (283)
Q Consensus 206 aTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~gl~~l~~~~P~v~I~ta~ 256 (283)
.|-.|+..|++..++.|. ++|++++ ++.+.-.++.+.+.+++|++..
T Consensus 27 NT~~tl~la~era~e~~I--k~iVVAS--~sG~TA~k~~e~~~~i~lVvVT 73 (201)
T 1vp8_A 27 NTEETLRLAVERAKELGI--KHLVVAS--SYGDTAMKALEMAEGLEVVVVT 73 (201)
T ss_dssp GHHHHHHHHHHHHHHHTC--CEEEEEC--SSSHHHHHHHHHCTTCEEEEEE
T ss_pred cHHHHHHHHHHHHHHcCC--CEEEEEe--CCChHHHHHHHHhcCCeEEEEe
Confidence 467777777777777776 4553332 2233334444455666666554
No 168
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A*
Probab=28.08 E-value=1.3e+02 Score=24.72 Aligned_cols=21 Identities=14% Similarity=0.033 Sum_probs=17.9
Q ss_pred CeEEEEeCCchhHHHHhhhhc
Q 023344 2 NMKIFVDTDADVRLARRIRRD 22 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd 22 (283)
|+.||+++|.++.+.|-..|.
T Consensus 124 d~vi~L~~~~e~~~~Rl~~R~ 144 (233)
T 1ak2_A 124 DSVIEFSIPDSLLIRRITGRL 144 (233)
T ss_dssp CEEEEEECCHHHHHHHHHTCE
T ss_pred CEEEEEECCHHHHHHHHHcCC
Confidence 689999999999888877664
No 169
>4gow_A Potassium voltage-gated channel subfamily KQT MEM; protein complex, protein binding, ION channel, calmodulin, P channel; 2.60A {Homo sapiens}
Probab=28.06 E-value=19 Score=25.35 Aligned_cols=25 Identities=44% Similarity=0.644 Sum_probs=5.9
Q ss_pred hHHHHhhh-----hcccc--CCCCHHHHHHHh
Q 023344 13 VRLARRIR-----RDTVE--RGRDVDSVLEQY 37 (283)
Q Consensus 13 ~~l~rr~~-----rd~~~--rgr~~~~v~~qy 37 (283)
+|..|+++ |-++| |.+|+.+|++||
T Consensus 13 irair~mkf~VarrkFkealrPYDVkDVIEQY 44 (72)
T 4gow_A 13 IRSIRILKFLVAKRKFKETLRPYDVKDVIEQY 44 (72)
T ss_dssp HHHHHHHHHHHHHHHC----------------
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccHHHHHHHH
Confidence 45555543 55555 899999999999
No 170
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=27.96 E-value=82 Score=25.85 Aligned_cols=21 Identities=19% Similarity=0.066 Sum_probs=18.2
Q ss_pred CeEEEEeCCchhHHHHhhhhc
Q 023344 2 NMKIFVDTDADVRLARRIRRD 22 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd 22 (283)
|+.||+++|.++++.|...|.
T Consensus 109 ~~vi~L~~~~~~~~~R~~~R~ 129 (227)
T 1zd8_A 109 DTVINLNVPFEVIKQRLTARW 129 (227)
T ss_dssp CEEEEEECCHHHHHHHHTCEE
T ss_pred CEEEEEECCHHHHHHHHHcCc
Confidence 689999999999998877764
No 171
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=27.74 E-value=20 Score=35.17 Aligned_cols=62 Identities=16% Similarity=0.178 Sum_probs=33.5
Q ss_pred eEEEEeCCchhHHHHhhhhccccC--CCCHH---HHHHH-----hhhccccCCCCchHHHHHHHHHHhhhhccccc
Q 023344 3 MKIFVDTDADVRLARRIRRDTVER--GRDVD---SVLEQ-----YADVIIPRGGDNHVAIDLIVQHIHTKLGQHDL 68 (283)
Q Consensus 3 ~~ifv~~~~d~~l~rr~~rd~~~r--gr~~~---~v~~q-----yaD~iip~~~~~~~a~~~i~~~i~~~l~~~~~ 68 (283)
+.||+++|.+++..|+-++ ..++ ...++ .+... .+|++|+.+.. .++.+++.|.+.|.++++
T Consensus 498 ~~V~Lda~~ev~~~R~~r~-l~~~~~~~~i~~~~~~r~~~~~p~~~dl~IDts~~---s~eevv~~Il~~l~~~~~ 569 (573)
T 1m8p_A 498 FLVHVATPLEHCEQSDKRG-IYAAARRGEIKGFTGVDDPYETPEKADLVVDFSKQ---SVRSIVHEIILVLESQGF 569 (573)
T ss_dssp EEEEECCCHHHHHHHCSSC-HHHHHHTTSSSSCBTTTBCCCCCSSCSEEECTTTS---CHHHHHHHHHHHHHHTTT
T ss_pred EEEEEeCCHHHHHHHhccc-chhhhhHHHHHHHHhccccccccCCCCEEEECCCC---CHHHHHHHHHHHHHhcCC
Confidence 7899999999998885321 1110 00111 11111 27888876432 245555666666655443
No 172
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=27.41 E-value=37 Score=27.80 Aligned_cols=54 Identities=24% Similarity=0.248 Sum_probs=27.0
Q ss_pred eEEEEeCCchhHHHHhhhhccccCCC-CHHHHHHHh------------hhccccCCCCchHHHHHHHHHHhh
Q 023344 3 MKIFVDTDADVRLARRIRRDTVERGR-DVDSVLEQY------------ADVIIPRGGDNHVAIDLIVQHIHT 61 (283)
Q Consensus 3 ~~ifv~~~~d~~l~rr~~rd~~~rgr-~~~~v~~qy------------aD~iip~~~~~~~a~~~i~~~i~~ 61 (283)
..||+..++...|.+|+. .||+ +.+.+..+. +|++|-|+ +.+.+++.+.+.|..
T Consensus 122 ~~i~i~~ps~~~l~~Rl~----~R~~~~~e~i~~Rl~~~~~e~~~~~~~d~vivN~-~~~~~~~~l~~~i~~ 188 (208)
T 3tau_A 122 IFIFLTPPDLSELKNRII----GRGTESMEVVEERMETAKKEIEMMASYDYAVVND-VVANAVQKIKGIVET 188 (208)
T ss_dssp EEEEEECTTTTTSSCC-----------CCHHHHHHHHHHHHHHHHGGGSSEEEECS-SHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCHHHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHhhccCCEEEECc-CHHHHHHHHHHHHHH
Confidence 468998886666666654 3342 333333211 78888765 334445555444443
No 173
>3bzs_A ESCU; auto cleavage protein, intein, T3SS, TTSS, asparagine cycliz membrane, membrane protein, protein transport; 1.48A {Escherichia coli} PDB: 3bzr_A 3bzp_A 3bzt_A 3c03_A
Probab=27.37 E-value=35 Score=27.22 Aligned_cols=89 Identities=15% Similarity=0.153 Sum_probs=43.7
Q ss_pred CCchhHHHHh---hhhccccCCCCHHHHHHHhhhccccCCCCchHH-----------------HHHHHHHHhhhhccccc
Q 023344 9 TDADVRLARR---IRRDTVERGRDVDSVLEQYADVIIPRGGDNHVA-----------------IDLIVQHIHTKLGQHDL 68 (283)
Q Consensus 9 ~~~d~~l~rr---~~rd~~~rgr~~~~v~~qyaD~iip~~~~~~~a-----------------~~~i~~~i~~~l~~~~~ 68 (283)
++.|+.+-.| +.|.+. ++|-...|-+ ||+||-|-.+..+| .+.+...|.+.-.+++
T Consensus 19 ~EGdP~iK~~~r~~~~e~~-~~~m~~~V~~--A~vvi~NPth~AVAL~Yd~~~~~AP~VvAKG~g~~A~~I~e~A~e~g- 94 (137)
T 3bzs_A 19 TDGNPEIKGERRRLHSEIQ-SGSLANNIKK--STVIVKDPTHIAICLYYKLGETPLPLVIETGKDAKALQIIKLAELYD- 94 (137)
T ss_dssp ----------------------CHHHHHHH--CSEEEEETTTEEEEEECCTTTCSSCEEEEEEETHHHHHHHHHHHHHT-
T ss_pred ccCCHHHHHHHHHHHHHHH-HhHHhcCCCC--CCEEEECCCcEEEEEEeCCCCCCCCEEEEEeCCHHHHHHHHHHHHcC-
Confidence 3444444333 334433 4444434332 99999887655443 2344444544444443
Q ss_pred ccCCCceeeecCchHHHHHh-HhhhcCCCChhhhHhhHHH
Q 023344 69 CKIYPNVYVIQSTFQIRGMH-TLIRDRGISKHDFVFYSDR 107 (283)
Q Consensus 69 ~~~~~~v~vl~~~~~l~~ll-t~LRd~~T~~~~Fr~~~~r 107 (283)
|-+++++++++.|. +.=.+...|...|.--+.-
T Consensus 95 ------VPi~e~~~LAr~Ly~~~~ig~~IP~ely~aVAei 128 (137)
T 3bzs_A 95 ------IPVIEDIPLARSLYKNIHKGQYITEDFFEPVAQL 128 (137)
T ss_dssp ------CCEEECHHHHHHHHHHSCTTCBCCGGGHHHHHHH
T ss_pred ------CCEEeCHHHHHHHHHhCCCCCccCHHHHHHHHHH
Confidence 66888888888888 4445777887777664443
No 174
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=27.05 E-value=1.2e+02 Score=24.74 Aligned_cols=47 Identities=9% Similarity=0.142 Sum_probs=32.0
Q ss_pred EEEEE-cCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCH---HHHHHHHHhC
Q 023344 197 HVLLL-DPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAP---EGIHCVCKRF 247 (283)
Q Consensus 197 ~Vil~-Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~---~gl~~l~~~~ 247 (283)
.|+++ |+.-.+...+..+++.+++.|+ +|.++++=... + ++.+.++-
T Consensus 109 iiil~~~~~~~~~~~~~~~a~~lk~~gi---~v~~Ig~G~~~~~~~-l~~la~~~ 159 (192)
T 2x5n_A 109 IVAFVGSPIVEDEKNLIRLAKRMKKNNV---AIDIIHIGELQNESA-LQHFIDAA 159 (192)
T ss_dssp EEEEECSCCSSCHHHHHHHHHHHHHTTE---EEEEEEESCC---CH-HHHHHHHH
T ss_pred EEEEEECCCCCCchhHHHHHHHHHHCCC---EEEEEEeCCCCccHH-HHHHHHhc
Confidence 35565 5554456788899999999987 56666653322 4 88888763
No 175
>3tmk_A Thymidylate kinase; phosphotransferase; HET: T5A; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 2tmk_A* 1tmk_A*
Probab=26.66 E-value=42 Score=28.37 Aligned_cols=17 Identities=18% Similarity=0.503 Sum_probs=15.1
Q ss_pred CeEEEE-eCCchhHHHHh
Q 023344 2 NMKIFV-DTDADVRLARR 18 (283)
Q Consensus 2 d~~ifv-~~~~d~~l~rr 18 (283)
|+.||+ |.|.++.+.|.
T Consensus 127 Dlti~L~dv~pe~~~~R~ 144 (216)
T 3tmk_A 127 DLTLFLSTQDVDNNAEKS 144 (216)
T ss_dssp SEEEEEECSCCSCGGGCC
T ss_pred CEEEEEeCCCHHHHHHHh
Confidence 899999 99999988764
No 176
>2jlj_A YSCU, YOP proteins translocation protein U; cell membrane, transmembrane, yersinia pesits, protein trans type III secretion system, membrane; 1.3A {Yersinia pestis} PDB: 2jlh_A* 2v5g_A 2w0r_A
Probab=26.36 E-value=39 Score=27.17 Aligned_cols=90 Identities=12% Similarity=0.164 Sum_probs=51.8
Q ss_pred CCchhHHHHh---hhhccccCCCCHHHHHHHhhhccccCCCCchHH-----------------HHHHHHHHhhhhccccc
Q 023344 9 TDADVRLARR---IRRDTVERGRDVDSVLEQYADVIIPRGGDNHVA-----------------IDLIVQHIHTKLGQHDL 68 (283)
Q Consensus 9 ~~~d~~l~rr---~~rd~~~rgr~~~~v~~qyaD~iip~~~~~~~a-----------------~~~i~~~i~~~l~~~~~ 68 (283)
+..|+.+-.| +.|.+. ++|-...|-+ ||+||-|-.+..|| .+.+...|.+.-.+++
T Consensus 18 ~EGdP~iK~~~R~~~~e~~-~~~m~~~V~~--A~vvi~NPth~AVAL~Yd~~~~~AP~VvAKG~g~~A~~I~e~A~e~g- 93 (144)
T 2jlj_A 18 MEGSPEIKSKRRQFHQEIQ-SRNMRENVKR--SSVVVAAATHIAIGILYKRGETPLPLVTFKYTDAQVQTVRKIAEEEG- 93 (144)
T ss_dssp --CCHHHHHHHHHHHHHHC-CCCHHHHHHT--CSEEEEETTTEEEEEECCTTTCSSCEEEEEEETHHHHHHHHHHHHHT-
T ss_pred ccCCHHHHHHHHHHHHHHH-hhHHhcCCCC--CCEEEECCCcEEEEEEeCCCCCCCCEEEEEeCCHHHHHHHHHHHHcC-
Confidence 3444444433 445544 4444444332 99999887665443 2344444544444443
Q ss_pred ccCCCceeeecCchHHHHHh-HhhhcCCCChhhhHhhHHHH
Q 023344 69 CKIYPNVYVIQSTFQIRGMH-TLIRDRGISKHDFVFYSDRL 108 (283)
Q Consensus 69 ~~~~~~v~vl~~~~~l~~ll-t~LRd~~T~~~~Fr~~~~rl 108 (283)
|-+++++++++.|. +.=.+...|...|.--+.-|
T Consensus 94 ------VPi~e~~~LAr~Ly~~~~ig~~IP~ely~aVAeiL 128 (144)
T 2jlj_A 94 ------VPILQRIPLARALYWDALVDHYIPAEQIEATAEVL 128 (144)
T ss_dssp ------CCEEECHHHHHHHHHHCCTTSBCCGGGHHHHHHHH
T ss_pred ------CCEEeCHHHHHHHHHhCCCCCccCHHHHHHHHHHH
Confidence 66888888888888 44457778877776654433
No 177
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=25.98 E-value=1.4e+02 Score=21.65 Aligned_cols=46 Identities=20% Similarity=0.329 Sum_probs=34.1
Q ss_pred CCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHHHHHHHHhCCCc
Q 023344 194 SERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSL 250 (283)
Q Consensus 194 ~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~gl~~l~~~~P~v 250 (283)
+++.|+++. .+|.....|...|++.|. ++..+ ..|+....++...+
T Consensus 54 ~~~~ivvyC---~~G~rs~~aa~~L~~~G~---~v~~l-----~GG~~~W~~~~~~~ 99 (108)
T 3gk5_A 54 RDKKYAVIC---AHGNRSAAAVEFLSQLGL---NIVDV-----EGGIQSWIEEGYPV 99 (108)
T ss_dssp TTSCEEEEC---SSSHHHHHHHHHHHTTTC---CEEEE-----TTHHHHHHHTTCCC
T ss_pred CCCeEEEEc---CCCcHHHHHHHHHHHcCC---CEEEE-----cCcHHHHHHcCCCC
Confidence 456788776 789999999999999997 34332 66888887766543
No 178
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=25.88 E-value=1.2e+02 Score=27.50 Aligned_cols=54 Identities=24% Similarity=0.402 Sum_probs=37.9
Q ss_pred EEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHHHHHHHHhCCCcEEEEE
Q 023344 198 VLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTS 255 (283)
Q Consensus 198 Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~gl~~l~~~~P~v~I~ta 255 (283)
+.++++.-. ......+++.|.+.|+ ++++.+-..-.+.+.++++.||+++++..
T Consensus 63 ~~~~e~~~~-~~d~~~~l~~l~~~g~---d~Ii~~g~~~~~~~~~vA~~~Pdv~fv~i 116 (356)
T 3s99_A 63 TTFLENVAE-GADAERSIKRIARAGN---KLIFTTSFGYMDPTVKVAKKFPDVKFEHA 116 (356)
T ss_dssp EEEECSCCT-THHHHHHHHHHHHTTC---SEEEECSGGGHHHHHHHHTTCTTSEEEEE
T ss_pred EEEEecCCC-HHHHHHHHHHHHHCCC---CEEEECCHHHHHHHHHHHHHCCCCEEEEE
Confidence 444444322 3455788999999998 46666555556789999999999987654
No 179
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=24.94 E-value=97 Score=27.79 Aligned_cols=35 Identities=23% Similarity=0.313 Sum_probs=28.5
Q ss_pred CCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEE
Q 023344 192 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLN 232 (283)
Q Consensus 192 ~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~ 232 (283)
++++++++|+ .+|+...+++..|.+.|+ ++|.+++
T Consensus 151 ~l~gk~~lVl----GaGG~g~aia~~L~~~Ga--~~V~i~n 185 (315)
T 3tnl_A 151 DIIGKKMTIC----GAGGAATAICIQAALDGV--KEISIFN 185 (315)
T ss_dssp CCTTSEEEEE----CCSHHHHHHHHHHHHTTC--SEEEEEE
T ss_pred CccCCEEEEE----CCChHHHHHHHHHHHCCC--CEEEEEE
Confidence 5789999876 458999999999999998 5776665
No 180
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=24.37 E-value=3.3e+02 Score=23.21 Aligned_cols=66 Identities=18% Similarity=0.117 Sum_probs=42.9
Q ss_pred ceeEeccCCCCCCCcEEEEEcCccc--------chHHHHHHHHHHHHcCCCCccEEEEEEeeC------HHHHHHHHHhC
Q 023344 182 KQLIYEKLPNDISERHVLLLDPVLA--------TGNSANQAIQLLIEKGVPESHIIFLNLISA------PEGIHCVCKRF 247 (283)
Q Consensus 182 ~~~~y~~lP~~i~~~~Vil~Dp~ia--------TG~t~~~ai~~L~~~G~~e~~I~~v~~vas------~~gl~~l~~~~ 247 (283)
...|...-| .++.++|+||... +.+.....++.|++.|.. | -.++.+ -.|+..+.+++
T Consensus 17 ~~~yli~~~---~~~~~ilID~g~~~~~~~~~~~~~~~~~l~~~l~~~g~~---i--~~Il~TH~H~DH~gg~~~l~~~~ 88 (298)
T 4efz_A 17 TISYLLFDS---GSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGAR---V--RWLLETHVHADHLSAAPYLKTRV 88 (298)
T ss_dssp BEEEEEECT---TTCEEEEESCCBEEETTTTEEECHHHHHHHHHHHHHTCE---E--EEEECSSCCSSSBCCHHHHHHHH
T ss_pred cEEEEEEEC---CCCeEEEEcCCCCccccccccCcccHHHHHHHHHHCCCc---c--eEEEECCCchhhhhhHHHHHHHh
Confidence 344444333 3678999999975 225666777888888862 3 233332 34778888877
Q ss_pred CCcEEEEEe
Q 023344 248 PSLKIVTSE 256 (283)
Q Consensus 248 P~v~I~ta~ 256 (283)
+++||+..
T Consensus 89 -~a~i~~~~ 96 (298)
T 4efz_A 89 -GGEIAIGR 96 (298)
T ss_dssp -CCEEEEET
T ss_pred -CCcEEECh
Confidence 78888875
No 181
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=24.24 E-value=1e+02 Score=23.15 Aligned_cols=43 Identities=12% Similarity=0.186 Sum_probs=31.5
Q ss_pred CCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHHHHHHHHh
Q 023344 194 SERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKR 246 (283)
Q Consensus 194 ~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~gl~~l~~~ 246 (283)
+++.|++++ .+|.....|...|++.|. +++..+ ..|+....++
T Consensus 85 ~~~~ivvyC---~~G~rs~~a~~~L~~~G~--~~v~~l-----~GG~~~W~~~ 127 (139)
T 2hhg_A 85 EDKKFVFYC---AGGLRSALAAKTAQDMGL--KPVAHI-----EGGFGAWRDA 127 (139)
T ss_dssp SSSEEEEEC---SSSHHHHHHHHHHHHHTC--CSEEEE-----TTHHHHHHHT
T ss_pred CCCeEEEEC---CCChHHHHHHHHHHHcCC--CCeEEe-----cCCHHHHHHC
Confidence 467788875 568888899999999998 566543 4667766553
No 182
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=24.05 E-value=34 Score=30.60 Aligned_cols=39 Identities=13% Similarity=0.076 Sum_probs=26.1
Q ss_pred EEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHHHHHHHH
Q 023344 198 VLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCK 245 (283)
Q Consensus 198 Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~gl~~l~~ 245 (283)
=+++||...||.|+.+|.+. |. .++++=..+...+-..+
T Consensus 254 ~~VlDpF~GsGtt~~aa~~~----gr-----~~ig~e~~~~~~~~~~~ 292 (323)
T 1boo_A 254 DLVVDIFGGSNTTGLVAERE----SR-----KWISFEMKPEYVAASAF 292 (323)
T ss_dssp CEEEETTCTTCHHHHHHHHT----TC-----EEEEEESCHHHHHHHHG
T ss_pred CEEEECCCCCCHHHHHHHHc----CC-----CEEEEeCCHHHHHHHHH
Confidence 46899999999999998764 42 34455445554444333
No 183
>1c3p_A Protein (HDLP (histone deacetylase-like protein) ); alpha/beta fold, lyase; 1.80A {Aquifex aeolicus} SCOP: c.42.1.2 PDB: 1c3r_A* 1c3s_A*
Probab=23.81 E-value=63 Score=29.91 Aligned_cols=61 Identities=15% Similarity=0.239 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHcCCCCccEEEEEE-eeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCchhhh
Q 023344 210 SANQAIQLLIEKGVPESHIIFLNL-ISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDR 277 (283)
Q Consensus 210 t~~~ai~~L~~~G~~e~~I~~v~~-vas~~gl~~l~~~~P~v~I~ta~iD~~ln~~~~ivPGlGd~GdR 277 (283)
.+.-|++.|+++|. ++|.++=+ +=-..|.+.+...-| +|.+..+... ..|+.||-|+..++
T Consensus 146 nvAiAa~~l~~~g~--~RV~IvD~DvHHGnGtq~iF~~dp--~Vl~~SiH~~---~~~ffPgtG~~~e~ 207 (375)
T 1c3p_A 146 NPAVGIEYLRKKGF--KRILYIDLDAHHCDGVQEAFYDTD--QVFVLSLHQS---PEYAFPFEKGFLEE 207 (375)
T ss_dssp HHHHHHHHHHHTTC--CCEEEEECSSSCCHHHHHHHTTCS--SEEEEEEEEC---TTTSTTSSSCCTTC
T ss_pred HHHHHHHHHHHhCC--CeEEEEecCCCCCHHHHHHhccCC--CEEEEecccC---CCCCCCCCCCcccc
Confidence 45566777888887 67755543 335789999998877 4556666542 35677888865443
No 184
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=23.70 E-value=75 Score=28.03 Aligned_cols=47 Identities=19% Similarity=0.326 Sum_probs=33.6
Q ss_pred CCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHHHHHHHHh
Q 023344 192 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKR 246 (283)
Q Consensus 192 ~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~gl~~l~~~ 246 (283)
++++++|+|+ .+|++..+++..|.+.|+ ++|.+++ =+++-.+++.+.
T Consensus 119 ~~~~k~vlvl----GaGGaaraia~~L~~~G~--~~v~v~n--Rt~~ka~~La~~ 165 (282)
T 3fbt_A 119 EIKNNICVVL----GSGGAARAVLQYLKDNFA--KDIYVVT--RNPEKTSEIYGE 165 (282)
T ss_dssp CCTTSEEEEE----CSSTTHHHHHHHHHHTTC--SEEEEEE--SCHHHHHHHCTT
T ss_pred CccCCEEEEE----CCcHHHHHHHHHHHHcCC--CEEEEEe--CCHHHHHHHHHh
Confidence 3678898875 568888999999999998 5787665 344445555443
No 185
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=23.52 E-value=37 Score=30.46 Aligned_cols=68 Identities=25% Similarity=0.248 Sum_probs=38.0
Q ss_pred EEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCH---HHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCch
Q 023344 198 VLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAP---EGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEF 274 (283)
Q Consensus 198 Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~---~gl~~l~~~~P~v~I~ta~iD~~ln~~~~ivPGlGd~ 274 (283)
=+++||...+|.|+.+|.+. |. .++++=..+ +-++-..++.-+ ++.+|... +..++...-++
T Consensus 244 ~~vlDpF~GsGtt~~aa~~~----~r-----~~ig~e~~~~~~~~~~~~~~Rl~~----~~~~~~~~--~~~~~~~~~~~ 308 (319)
T 1eg2_A 244 STVLDFFAGSGVTARVAIQE----GR-----NSICTDAAPVFKEYYQKQLTFLQD----DGLIDKAR--SYEIVEGAANF 308 (319)
T ss_dssp CEEEETTCTTCHHHHHHHHH----TC-----EEEEEESSTHHHHHHHHHHHHC-------------C--CEEEEECGGGT
T ss_pred CEEEecCCCCCHHHHHHHHc----CC-----cEEEEECCccHHHHHHHHHHHHHH----ccCCcccc--eeeecchHHHH
Confidence 46899999999999999875 42 344554455 444433333322 22334321 24566666777
Q ss_pred hhhccC
Q 023344 275 GDRYFG 280 (283)
Q Consensus 275 GdR~fg 280 (283)
.|+++-
T Consensus 309 ~~~~~~ 314 (319)
T 1eg2_A 309 GAALQR 314 (319)
T ss_dssp HHHHCC
T ss_pred HHHHhc
Confidence 777663
No 186
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=23.51 E-value=2.2e+02 Score=24.12 Aligned_cols=54 Identities=13% Similarity=0.250 Sum_probs=36.7
Q ss_pred CcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeC------HHHHHHHHHhCCCcEEEEEeec
Q 023344 195 ERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISA------PEGIHCVCKRFPSLKIVTSEID 258 (283)
Q Consensus 195 ~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas------~~gl~~l~~~~P~v~I~ta~iD 258 (283)
++..+|+||.- +. ..++.|++.|. +| -.++.+ -.|+..+.+.||+++||+..-+
T Consensus 28 ~~~~vlID~G~--~~---~i~~~l~~~g~---~i--~~Il~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~ 87 (258)
T 2qed_A 28 EGRCVIVDPGE--AA---PVLKAIAEHKW---MP--EAIFLTHHHHDHVGGVKELLQHFPQMTVYGPAET 87 (258)
T ss_dssp TSEEEEECCSC--HH---HHHHHHHHHTC---EE--EEEECCSCCHHHHTTHHHHHHHCTTCEEEECGGG
T ss_pred CCcEEEEeCCC--cH---HHHHHHHHcCC---CC--CEEEeCCCCccccCCHHHHHHHCCCCEEEecccc
Confidence 46789999973 33 34566667675 23 334443 3488899999999999987543
No 187
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=23.48 E-value=1.9e+02 Score=26.42 Aligned_cols=49 Identities=22% Similarity=0.404 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHcCCCCccEEEEEEee------------------CHHHHHHHHHhCCCcEEEEE-eecC
Q 023344 209 NSANQAIQLLIEKGVPESHIIFLNLIS------------------APEGIHCVCKRFPSLKIVTS-EIDV 259 (283)
Q Consensus 209 ~t~~~ai~~L~~~G~~e~~I~~v~~va------------------s~~gl~~l~~~~P~v~I~ta-~iD~ 259 (283)
..+.+.++.+.+.|+ ..|.+-.+.- -+.+++.|+++||++-|+|- |+|+
T Consensus 69 d~l~~~~~~~~~lGi--~~v~LFgv~~~~~~KD~~gs~A~~~~g~v~rair~iK~~~pdl~VitDvcLc~ 136 (342)
T 1h7n_A 69 NRLKDYLKPLVAKGL--RSVILFGVPLIPGTKDPVGTAADDPAGPVIQGIKFIREYFPELYIICDVCLCE 136 (342)
T ss_dssp HHHHHHHHHHHHTTC--CEEEEEEECCSTTCCBTTCGGGGCTTSHHHHHHHHHHHHCTTSEEEEEECSTT
T ss_pred HHHHHHHHHHHHCCC--CEEEEecccCccCCCCccccccCCCCChHHHHHHHHHHHCCCeEEEEeeeccc
Confidence 578899999999999 5777777643 15689999999999887773 4555
No 188
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=23.31 E-value=99 Score=26.56 Aligned_cols=60 Identities=13% Similarity=0.230 Sum_probs=37.3
Q ss_pred CcEEEEEcCcccc-hHHHHHHHHHHHHcCCCCccEEEEEE----eeCHHHHHHHHHhCCCcEEEEEee
Q 023344 195 ERHVLLLDPVLAT-GNSANQAIQLLIEKGVPESHIIFLNL----ISAPEGIHCVCKRFPSLKIVTSEI 257 (283)
Q Consensus 195 ~~~Vil~Dp~iaT-G~t~~~ai~~L~~~G~~e~~I~~v~~----vas~~gl~~l~~~~P~v~I~ta~i 257 (283)
+..++|+|+.... +..+..+++.+.+ +. ++|..+-+ .-=-.|+..+.++||+++||+..-
T Consensus 33 ~~~~iLID~G~~~~~~~~~~~l~~~~~-~~--~~i~~Ii~TH~H~DH~gg~~~l~~~~~~a~v~~~~~ 97 (303)
T 2vw8_A 33 EASWALVEGGISRDAELVWADLCRWVA-DP--SQVHYWLITHKHYDHCGLLPYLCPRLPNVQVLASER 97 (303)
T ss_dssp TTEEEEECCCCGGGHHHHHHHHHHHCS-CG--GGEEEEECCCCSTTTTTTHHHHGGGCTTCEEEEEHH
T ss_pred CCceEEEECCCCCcHHHHHHHHHHHhc-Cc--ccceEEEeccCCccccCCHHHHHHhCCCCeEEECHH
Confidence 4578999998854 4555555554421 22 45543322 001347888989999999998754
No 189
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=23.25 E-value=2.4e+02 Score=24.70 Aligned_cols=83 Identities=11% Similarity=0.177 Sum_probs=57.5
Q ss_pred cEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeC---------------HHHHHHHHHhCCCcEEEEEeecCC
Q 023344 196 RHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISA---------------PEGIHCVCKRFPSLKIVTSEIDVA 260 (283)
Q Consensus 196 ~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas---------------~~gl~~l~~~~P~v~I~ta~iD~~ 260 (283)
..+++.-|.-.+=..+..+++.|++.|++- .=++++-+.. .++++++.+.|+...++..-+++.
T Consensus 224 ~~vlV~~p~~~~~~~~~~~~~~l~~~gi~v-~gvV~N~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~iPl~~~ 302 (324)
T 3zq6_A 224 SFKMVVIPEEMSIYESERAMKALEKYSIHA-DGVIVNQVLPEESDCEFCNARRKLQQERLKQIREKFSDKVVAEVPLLKK 302 (324)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHHTTCCE-EEEEEEEECCSCCCSHHHHHHHHHHHHHHHHHHHHTTTSEEEEEECCSS
T ss_pred eEEEEeCCcccHHHHHHHHHHHHHHCCCCc-cEEEEcCCccccCCChHHHHHHHHHHHHHHHHHHHcCCCcEEEecCCCC
Confidence 568888888888899999999999999852 2244453322 258899999999888877665543
Q ss_pred CCCCCeeecCCCchhhhccCCC
Q 023344 261 LNEEFRVIPGLGEFGDRYFGTD 282 (283)
Q Consensus 261 ln~~~~ivPGlGd~GdR~fgt~ 282 (283)
- -.=++.|..+++.+|+..
T Consensus 303 e---~~g~~~L~~~~~~l~~~~ 321 (324)
T 3zq6_A 303 E---AKGIETLEKIAEQLYGEP 321 (324)
T ss_dssp C---SCSHHHHHHHHHHHHCSC
T ss_pred C---CCCHHHHHHHHHHHhCCC
Confidence 1 011233567777777754
No 190
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=23.24 E-value=1.6e+02 Score=24.55 Aligned_cols=53 Identities=23% Similarity=0.360 Sum_probs=32.4
Q ss_pred eEEEEeCCchhHHHHhhhhccccCCC-CHHHHHHHh------------hhccccCCCCchHHHHHHHHHHh
Q 023344 3 MKIFVDTDADVRLARRIRRDTVERGR-DVDSVLEQY------------ADVIIPRGGDNHVAIDLIVQHIH 60 (283)
Q Consensus 3 ~~ifv~~~~d~~l~rr~~rd~~~rgr-~~~~v~~qy------------aD~iip~~~~~~~a~~~i~~~i~ 60 (283)
..||+-++.-..+.+|+ ..||. +.+++..++ .|.+|.|. +-+.|++.+.+.|.
T Consensus 131 ~tI~i~th~~~~l~~Rl----~~rG~~~~e~i~~rl~~a~~e~~~~~~~d~~i~Nd-~l~~a~~~l~~ii~ 196 (219)
T 1s96_A 131 RSIFILPPSKIELDRRL----RGRGQDSEEVIAKRMAQAVAEMSHYAEYDYLIVND-DFDTALTDLKTIIR 196 (219)
T ss_dssp EEEEEECSSHHHHHHHH----HTTSCSCHHHHHHHHHHHHHHHTTGGGSSEEEECS-SHHHHHHHHHHHHH
T ss_pred EEEEEECCCHHHHHHHH----HHcCCCCHHHHHHHHHHHHHHHhhccCCCEEEECc-CHHHHHHHHHHHHH
Confidence 56888888777777776 45674 556665544 56666653 33445555544443
No 191
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=23.16 E-value=1.4e+02 Score=21.28 Aligned_cols=19 Identities=5% Similarity=0.170 Sum_probs=11.2
Q ss_pred CCCcEEEEEcCcccchHHH
Q 023344 193 ISERHVLLLDPVLATGNSA 211 (283)
Q Consensus 193 i~~~~Vil~Dp~iaTG~t~ 211 (283)
..+++|+++|+--.....+
T Consensus 5 ~~~~~ilivdd~~~~~~~l 23 (130)
T 3eod_A 5 LVGKQILIVEDEQVFRSLL 23 (130)
T ss_dssp TTTCEEEEECSCHHHHHHH
T ss_pred CCCCeEEEEeCCHHHHHHH
Confidence 4456777777755444433
No 192
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=23.10 E-value=1.2e+02 Score=26.15 Aligned_cols=82 Identities=15% Similarity=0.133 Sum_probs=48.7
Q ss_pred ccchHHHHHHHHhccCceeeeEEEEecCCCCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEE
Q 023344 151 RSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIF 230 (283)
Q Consensus 151 RaG~~m~~~l~~~~p~a~~G~i~i~R~~~t~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~ 230 (283)
-+|+.+++.+++.+|...+=++ .| -..+|-..++. +. -..-+..+++.|.++|+ +-|++
T Consensus 22 ~Ggltv~~~i~~~~P~~~~iy~---~D--------~~~~Pyg~~s~-----~~---i~~~~~~~~~~L~~~g~--d~ivi 80 (273)
T 2oho_A 22 VGGLTVVCELIRQLPHEKIVYI---GD--------SARAPYGPRPK-----KQ---IKEYTWELVNFLLTQNV--KMIVF 80 (273)
T ss_dssp STTHHHHHHHHHHCTTCCEEEE---EC--------GGGCCCTTSCH-----HH---HHHHHHHHHHHHHTTTC--SEEEE
T ss_pred CcHHHHHHHHHHHCCCCCEEEE---eC--------CCCCCCCCCCH-----HH---HHHHHHHHHHHHHHCCC--CEEEE
Confidence 3478889999999998764111 11 12344322221 11 13556677788888888 44554
Q ss_pred EEEeeCHHHHHHHHHhCCCcEEEE
Q 023344 231 LNLISAPEGIHCVCKRFPSLKIVT 254 (283)
Q Consensus 231 v~~vas~~gl~~l~~~~P~v~I~t 254 (283)
.|--++.-+++.+.+.+ ++.|+.
T Consensus 81 aCNTas~~~l~~lr~~~-~iPvig 103 (273)
T 2oho_A 81 ACNTATAVAWEEVKAAL-DIPVLG 103 (273)
T ss_dssp CCHHHHHHHHHHHHHHC-SSCEEE
T ss_pred eCchHhHHHHHHHHHhC-CCCEEe
Confidence 44444445688998887 455544
No 193
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=22.96 E-value=74 Score=27.88 Aligned_cols=59 Identities=14% Similarity=0.081 Sum_probs=46.6
Q ss_pred CCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEE-EeeCHHHHHHHHHhCCCcE
Q 023344 193 ISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLN-LISAPEGIHCVCKRFPSLK 251 (283)
Q Consensus 193 i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~-~vas~~gl~~l~~~~P~v~ 251 (283)
+....+++=+--..|+..+..+.+.|+++|.+.++|++|| ..-.+-+...+.+.+|++.
T Consensus 112 Vp~~~IllE~~S~nT~ENa~~s~~ll~~~g~~~~~iiLVTs~~Hm~RA~~~f~~~~~~~~ 171 (266)
T 3ca8_A 112 IPHEKIWIEDQSTNCGENARFSIALLNQAVERVHTAIVVQDPTMQRRTMATFRRMTGDNP 171 (266)
T ss_dssp CCGGGEEEECCCCSHHHHHHHHHHHHHTCSSCCSCEEEECCTTTHHHHHHHHHHHHCCCT
T ss_pred CCHHHEEeCCCCccHHHHHHHHHHHHHhcCCCCCeEEEECChhHHHHHHHHHHHhCCCCC
Confidence 4445678888889999999999999999998556887777 3445667888888889875
No 194
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=22.87 E-value=1.2e+02 Score=21.50 Aligned_cols=27 Identities=22% Similarity=0.409 Sum_probs=23.0
Q ss_pred CCcEEEEEcCcccchHHHHHHHHHHHHcCC
Q 023344 194 SERHVLLLDPVLATGNSANQAIQLLIEKGV 223 (283)
Q Consensus 194 ~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~ 223 (283)
+++.|+++. .+|.....|...|++.|.
T Consensus 55 ~~~~ivvyC---~~g~rs~~a~~~L~~~G~ 81 (100)
T 3foj_A 55 DNETYYIIC---KAGGRSAQVVQYLEQNGV 81 (100)
T ss_dssp TTSEEEEEC---SSSHHHHHHHHHHHTTTC
T ss_pred CCCcEEEEc---CCCchHHHHHHHHHHCCC
Confidence 467888875 789999999999999997
No 195
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=22.65 E-value=1.5e+02 Score=25.73 Aligned_cols=55 Identities=11% Similarity=0.123 Sum_probs=34.7
Q ss_pred cEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHHHHHHHHhCCCcEEEEE
Q 023344 196 RHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTS 255 (283)
Q Consensus 196 ~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~gl~~l~~~~P~v~I~ta 255 (283)
..++++++. +.......++.|.++|+. .++++.....+.+.++.+.+|++.++..
T Consensus 38 ~~~~~~~~~--~~~~~~~~l~~l~~~~~d---gIi~~~~~~~~~~~~~a~~~p~~p~v~i 92 (318)
T 2fqx_A 38 AKCKYVTAS--TDAEYVPSLSAFADENMG---LVVACGSFLVEAVIETSARFPKQKFLVI 92 (318)
T ss_dssp CEEEEEECC--SGGGHHHHHHHHHHTTCS---EEEEESTTTHHHHHHHHHHCTTSCEEEE
T ss_pred CeEEEEeCC--CHHHHHHHHHHHHHcCCC---EEEECChhHHHHHHHHHHHCCCCEEEEE
Confidence 345555542 223345678889888883 4444333334568888888999887664
No 196
>1dek_A Deoxynucleoside monophosphate kinase; transferase, phosphotransferase; HET: DGP; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1 PDB: 1del_A*
Probab=22.59 E-value=33 Score=29.66 Aligned_cols=46 Identities=22% Similarity=0.250 Sum_probs=30.2
Q ss_pred CeEEEEeCCchhHHHHhhhhcc----ccCC----CC----HHHHHHHhhhccccCCCC
Q 023344 2 NMKIFVDTDADVRLARRIRRDT----VERG----RD----VDSVLEQYADVIIPRGGD 47 (283)
Q Consensus 2 d~~ifv~~~~d~~l~rr~~rd~----~~rg----r~----~~~v~~qyaD~iip~~~~ 47 (283)
|..|.+|++.+.++.|-..|+. ..+- .+ .+..-..+||+||.|++.
T Consensus 169 d~VvVvdv~~~~qieRl~~rg~~~v~i~~~~~~~i~~Q~se~~~k~~~AD~VI~N~gs 226 (241)
T 1dek_A 169 DYYIVPDTRQDHEMDAARAMGATVIHVVRPGQKSNDTHITEAGLPIRDGDLVITNDGS 226 (241)
T ss_dssp SEEEECCCCSHHHHHHHHHTTCEEEEEECTTCCCSCCSGGGSCCCCCTTCEEEECCSC
T ss_pred CEEEEEcCCcHHHHHHHHHCCCceEEEECcccchhhcCCCcccccccCCCEEEECCCC
Confidence 5678899999999999888874 2221 11 110112349999998754
No 197
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=22.58 E-value=2.2e+02 Score=25.34 Aligned_cols=83 Identities=14% Similarity=0.189 Sum_probs=56.2
Q ss_pred CcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeC---------------HHHHHHHHHhCCCcEEEEEeecC
Q 023344 195 ERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISA---------------PEGIHCVCKRFPSLKIVTSEIDV 259 (283)
Q Consensus 195 ~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas---------------~~gl~~l~~~~P~v~I~ta~iD~ 259 (283)
...+++.-|.-.+=..+..+++.|++.|++- .=++++-+.. .++++++.+.|+...+...-+++
T Consensus 238 ~~~vlV~~p~~~~~~e~~r~~~~l~~~~i~v-~gvV~N~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~l~~iPl~~ 316 (349)
T 3ug7_A 238 TAFRLVVIPEEMSILESERAMKALQKYGIPI-DAVIVNQLIPEDVQCDFCRARRELQLKRLEMIKEKFGDKVIAYVPLLR 316 (349)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHHTTCCE-EEEEEEEECCSCCCSHHHHHHHHHHHHHHHHHHHHSTTSEEEEEECCS
T ss_pred ceEEEEECCCccHHHHHHHHHHHHHHCCCCe-eEEEEcCCccccCCCchHHHHHHHHHHHHHHHHHHcCCCcEEEecCCC
Confidence 4578999999999999999999999999852 2244453321 36899999999988887776665
Q ss_pred CCCCCCeeecCCCchhhhccCC
Q 023344 260 ALNEEFRVIPGLGEFGDRYFGT 281 (283)
Q Consensus 260 ~ln~~~~ivPGlGd~GdR~fgt 281 (283)
.-- .| ++.|..+++.+|+.
T Consensus 317 ~e~-~g--~~~L~~~~~~l~~~ 335 (349)
T 3ug7_A 317 TEA-KG--IETLKQIAKILYGE 335 (349)
T ss_dssp SCS-CS--HHHHHHHHHHHC--
T ss_pred CCC-CC--HHHHHHHHHHHcCC
Confidence 410 01 12255666666664
No 198
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=22.24 E-value=1.1e+02 Score=25.92 Aligned_cols=58 Identities=17% Similarity=0.324 Sum_probs=39.8
Q ss_pred cEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeC------HHHHHHHHHhCCCcEEEEEeec
Q 023344 196 RHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISA------PEGIHCVCKRFPSLKIVTSEID 258 (283)
Q Consensus 196 ~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas------~~gl~~l~~~~P~v~I~ta~iD 258 (283)
...+|+|+... .......+.|++.|..+++|.. ++.+ -.|+..+.+. ++++||+..-+
T Consensus 64 ~~~iLID~G~~--~~~~~~~~~l~~~g~~~~~i~~--ii~TH~H~DH~gg~~~l~~~-~~~~v~~~~~~ 127 (294)
T 3m8t_A 64 QGLILMDTAMP--QSTGMIKDNIAKLGFKVADIKL--ILNTHAHLDHTGGFAEIKKE-TGAQLVAGERD 127 (294)
T ss_dssp TEEEEECCCCG--GGHHHHHHHHHHTTCCGGGEEE--EECSCCCHHHHTTHHHHHHH-HCCEEEEEGGG
T ss_pred CceEEEECCCc--hhHHHHHHHHHHcCCCHHHCcE--EEECCCCccccccHHHHhhc-cCCEEEEChHH
Confidence 46899999874 3445667788888986566643 3333 3477778776 68899987544
No 199
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=21.55 E-value=83 Score=23.02 Aligned_cols=27 Identities=15% Similarity=0.319 Sum_probs=22.3
Q ss_pred CCcEEEEEcCcccchHHHHHHHHHHHHcCC
Q 023344 194 SERHVLLLDPVLATGNSANQAIQLLIEKGV 223 (283)
Q Consensus 194 ~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~ 223 (283)
+++.++++ +.+|.....|.+.|+++|.
T Consensus 55 ~~~~ivv~---C~~G~rS~~aa~~L~~~G~ 81 (103)
T 3iwh_A 55 KNEIYYIV---CAGGVRSAKVVEYLEANGI 81 (103)
T ss_dssp TTSEEEEE---CSSSSHHHHHHHHHHTTTC
T ss_pred CCCeEEEE---CCCCHHHHHHHHHHHHcCC
Confidence 36777776 5789888999999999998
No 200
>3ch4_B Pmkase, phosphomevalonate kinase; parallel beta-sheet with the strand order 23145, walker A motif, cholesterol biosynthesis, lipid synthesis; 1.76A {Homo sapiens}
Probab=21.20 E-value=23 Score=30.04 Aligned_cols=42 Identities=21% Similarity=0.196 Sum_probs=26.5
Q ss_pred EEEEeCCchhHHHHhhhhccccCCCC---HHHHHHHh--hhccccCCCCc
Q 023344 4 KIFVDTDADVRLARRIRRDTVERGRD---VDSVLEQY--ADVIIPRGGDN 48 (283)
Q Consensus 4 ~ifv~~~~d~~l~rr~~rd~~~rgr~---~~~v~~qy--aD~iip~~~~~ 48 (283)
.|+|+++.++|+.|-. .+ .+|++ .+.-+..| ||++|.|++..
T Consensus 130 iirI~as~~~R~~Rg~-~~--~~~~Dd~esE~gL~~~~~~D~vI~Ndgt~ 176 (202)
T 3ch4_B 130 TVRVVALEQSRQQRGW-VF--TPGVDDAESECGLDNFGDFDWVIENHGVE 176 (202)
T ss_dssp EEEEEECHHHHHHTTC-CC--CTTTTTSHHHHTTTTCCCCSEEEEECSCH
T ss_pred EEEEECCHHHHHHHhh-hc--cccccccccccCCCCCCcCCEEEEeCCCH
Confidence 5899999999999941 11 12222 22333343 99999987653
No 201
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=21.03 E-value=1.3e+02 Score=26.12 Aligned_cols=81 Identities=7% Similarity=0.054 Sum_probs=47.6
Q ss_pred cchHHHHHHHHhccCceeeeEEEEecCCCCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHH-cCCCCccEEE
Q 023344 152 SGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIE-KGVPESHIIF 230 (283)
Q Consensus 152 aG~~m~~~l~~~~p~a~~G~i~i~R~~~t~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~-~G~~e~~I~~ 230 (283)
+|+.+++.+++.+|+...-+++= -..+|-..++.. .+ -.-+..+++.|.+ +|+ +-|++
T Consensus 14 GGltv~~~i~~~lP~~~~iy~~D-----------~~~~PyG~~s~~------~i--~~~~~~~~~~L~~~~g~--d~iVi 72 (272)
T 1zuw_A 14 GGLTVAKEIMRQLPKENIIYVGD-----------TKRCPYGPRPEE------EV--LQYTWELTNYLLENHHI--KMLVI 72 (272)
T ss_dssp TTHHHHHHHHHHSTTCCEEEEEC-----------GGGCCCSSSCHH------HH--HHHHHHHHHHHHHHSCC--SEEEE
T ss_pred chHHHHHHHHHhCCCCcEEEecc-----------CCCCCCCCCCHH------HH--HHHHHHHHHHHHhhcCC--CEEEE
Confidence 47888999999999887621111 124453222210 01 1234667888888 898 34544
Q ss_pred EEEeeCHHHHHHHHHhCCCcEEEE
Q 023344 231 LNLISAPEGIHCVCKRFPSLKIVT 254 (283)
Q Consensus 231 v~~vas~~gl~~l~~~~P~v~I~t 254 (283)
+|==++.-+++.+.+.+ ++.|+.
T Consensus 73 ACNTas~~~l~~lr~~~-~iPVig 95 (272)
T 1zuw_A 73 ACNTATAIALDDIQRSV-GIPVVG 95 (272)
T ss_dssp CCHHHHHHHHHHHHHHC-SSCEEE
T ss_pred eCchhhHHHHHHHHHHC-CCCEEc
Confidence 44444445899998887 455543
No 202
>1z63_A Helicase of the SNF2/RAD54 hamily; protein-DNA complex, hydrolase/DNA complex complex; 3.00A {Sulfolobus solfataricus} SCOP: c.37.1.19 c.37.1.19 PDB: 1z6a_A
Probab=20.94 E-value=2.1e+02 Score=26.29 Aligned_cols=58 Identities=12% Similarity=0.094 Sum_probs=37.1
Q ss_pred CcEEEEEcCcccchHHHHH--HHHHHHHcCCCCccEEEEEEeeC-HHHHHHHHHhCCCcEEEE
Q 023344 195 ERHVLLLDPVLATGNSANQ--AIQLLIEKGVPESHIIFLNLISA-PEGIHCVCKRFPSLKIVT 254 (283)
Q Consensus 195 ~~~Vil~Dp~iaTG~t~~~--ai~~L~~~G~~e~~I~~v~~vas-~~gl~~l~~~~P~v~I~t 254 (283)
++.+||.||| .+|.|+.+ ++..++..+.. .++.++|+.+- .+=.+.+.+.+|+.++.+
T Consensus 56 ~~~~ilad~~-GlGKT~~ai~~i~~~~~~~~~-~~~LIv~P~~l~~qw~~e~~~~~~~~~v~~ 116 (500)
T 1z63_A 56 GFGICLADDM-GLGKTLQTIAVFSDAKKENEL-TPSLVICPLSVLKNWEEELSKFAPHLRFAV 116 (500)
T ss_dssp TCCEEECCCT-TSCHHHHHHHHHHHHHHTTCC-SSEEEEECSTTHHHHHHHHHHHCTTSCEEE
T ss_pred CCCEEEEeCC-CCcHHHHHHHHHHHHHhcCCC-CCEEEEccHHHHHHHHHHHHHHCCCceEEE
Confidence 5678899987 56999864 34455555532 57778876322 344566777778766544
No 203
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=20.93 E-value=1.2e+02 Score=26.51 Aligned_cols=77 Identities=9% Similarity=0.134 Sum_probs=45.4
Q ss_pred chHHHHHHHHhccCceeeeEEEEecCCCCceeEe---ccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEE
Q 023344 153 GESMENALRACCKGIKIGKILIHRDGDNGKQLIY---EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHII 229 (283)
Q Consensus 153 G~~m~~~l~~~~p~a~~G~i~i~R~~~t~~~~~y---~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~ 229 (283)
|+.+++.+++.+|.... +|+ ..+|-...+.. .+ -.-+..+++.|.++|+ +-|+
T Consensus 34 gltv~~~i~~~~P~~~~--------------iy~~D~~~~Pyg~~s~~------~i--~~~~~~~~~~L~~~g~--d~IV 89 (286)
T 2jfq_A 34 GLTVAKEIMRQLPNETI--------------YYLGDIGRCPYGPRPGE------QV--KQYTVEIARKLMEFDI--KMLV 89 (286)
T ss_dssp THHHHHHHHHHCTTCCE--------------EEEECTTTCCCTTSCHH------HH--HHHHHHHHHHHTTSCC--SEEE
T ss_pred cHHHHHHHHHHCCCccE--------------EEeccCCCCCcCCCCHH------HH--HHHHHHHHHHHHHCCC--CEEE
Confidence 88899999999997764 222 23443222110 01 1234566778888887 3344
Q ss_pred EEEEeeCHHHHHHHHHhCCCcEEEE
Q 023344 230 FLNLISAPEGIHCVCKRFPSLKIVT 254 (283)
Q Consensus 230 ~v~~vas~~gl~~l~~~~P~v~I~t 254 (283)
+.|-=++.-+++.+.+.+ ++.|+.
T Consensus 90 IaCNTas~~~l~~lr~~~-~iPVig 113 (286)
T 2jfq_A 90 IACNTATAVALEYLQKTL-SISVIG 113 (286)
T ss_dssp ECCHHHHHHHHHHHHHHC-SSEEEE
T ss_pred EeCCchhHHHHHHHHHhC-CCCEEe
Confidence 444333334788888887 566554
No 204
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=20.76 E-value=2.1e+02 Score=20.12 Aligned_cols=12 Identities=17% Similarity=0.382 Sum_probs=6.6
Q ss_pred cEEEEEcCcccc
Q 023344 196 RHVLLLDPVLAT 207 (283)
Q Consensus 196 ~~Vil~Dp~iaT 207 (283)
++|+++|+--..
T Consensus 3 ~~ilivdd~~~~ 14 (120)
T 3f6p_A 3 KKILVVDDEKPI 14 (120)
T ss_dssp CEEEEECSCHHH
T ss_pred CeEEEEECCHHH
Confidence 456666664433
No 205
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=20.72 E-value=1.5e+02 Score=23.09 Aligned_cols=17 Identities=18% Similarity=0.350 Sum_probs=8.6
Q ss_pred CCCcEEEEEcCcccchH
Q 023344 193 ISERHVLLLDPVLATGN 209 (283)
Q Consensus 193 i~~~~Vil~Dp~iaTG~ 209 (283)
....+|+|+|+--....
T Consensus 5 m~~~~iLivdd~~~~~~ 21 (184)
T 3rqi_A 5 MSDKNFLVIDDNEVFAG 21 (184)
T ss_dssp --CCEEEEECSCHHHHH
T ss_pred CCCCeEEEEcCCHHHHH
Confidence 34456777776544333
No 206
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=20.68 E-value=78 Score=24.38 Aligned_cols=33 Identities=18% Similarity=0.175 Sum_probs=22.6
Q ss_pred eEEEEeCCchhHHHHhhhhccccCCCCHHHHHHHh
Q 023344 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQY 37 (283)
Q Consensus 3 ~~ifv~~~~d~~l~rr~~rd~~~rgr~~~~v~~qy 37 (283)
..||+++|.++++.|...|... ..+.+.+..+|
T Consensus 108 ~~i~l~~~~~~~~~R~~~R~~~--~~~~~~i~~~~ 140 (181)
T 1ly1_A 108 EHKVFDVPWTELVKRNSKRGTK--AVPIDVLRSMY 140 (181)
T ss_dssp EEEECCCCHHHHHHHHTTCGGG--CCCHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHhccccC--CCCHHHHHHHH
Confidence 5799999999999888777642 33444444444
No 207
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=20.46 E-value=46 Score=28.53 Aligned_cols=38 Identities=26% Similarity=0.270 Sum_probs=25.9
Q ss_pred EEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEeeCHHHHHHHHH
Q 023344 199 LLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCK 245 (283)
Q Consensus 199 il~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~v~~vas~~gl~~l~~ 245 (283)
+++||...||.|+.+|.+. |. .++++=..++.++-..+
T Consensus 215 ~vlD~f~GsGtt~~~a~~~----gr-----~~ig~e~~~~~~~~~~~ 252 (260)
T 1g60_A 215 LVLDCFMGSGTTAIVAKKL----GR-----NFIGCDMNAEYVNQANF 252 (260)
T ss_dssp EEEESSCTTCHHHHHHHHT----TC-----EEEEEESCHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHc----CC-----eEEEEeCCHHHHHHHHH
Confidence 7899999999999998763 43 34455555555544433
Done!