BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023346
(283 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y673|ALG5_HUMAN Dolichyl-phosphate beta-glucosyltransferase OS=Homo sapiens GN=ALG5
PE=1 SV=1
Length = 324
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 123/208 (59%), Gaps = 20/208 (9%)
Query: 37 HAHIEAPAIFEDPSSLKQVPCPSVTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRA 96
H H E F + K+ PS+ D K +S+++P++NEE RLP +DE L+YL++R
Sbjct: 38 HRH-EEEKFFLNAKGQKET-LPSIWDSPTKQLSVVVPSYNEEKRLPVMMDEALSYLEKRQ 95
Query: 97 AKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSR 156
+D +FTYEV+++DDGS D T +VAF + +KY D VR+I L +N GKG AIR G+ SR
Sbjct: 96 KRDPAFTYEVIVVDDGSKDQTSKVAFKYCQKYGSDKVRVITLVKNRGKGGAIRMGIFSSR 155
Query: 157 GELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAH 216
GE +LM DADGATK D+EKLE ++ D + + IA GSRAH
Sbjct: 156 GEKILMADADGATKFPDVEKLEKGLN---------------DLQPWPNQMAIAC-GSRAH 199
Query: 217 LEEKALATVQYCDCPRCFICIFL--FLC 242
LE++++A Y + FL FLC
Sbjct: 200 LEKESIAQRSYFRTLLMYGFHFLVWFLC 227
>sp|Q9DB25|ALG5_MOUSE Dolichyl-phosphate beta-glucosyltransferase OS=Mus musculus GN=Alg5
PE=2 SV=1
Length = 324
Score = 150 bits (380), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 115/197 (58%), Gaps = 27/197 (13%)
Query: 58 PSVTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGT 117
PS+ D K +S+++P++NEE RLP +DE LNYL++R D +FTYEV+++DDGS D T
Sbjct: 57 PSIWDSPTKQLSVVVPSYNEEKRLPVMMDEALNYLEKRQKHDCTFTYEVIVVDDGSEDQT 116
Query: 118 KRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL 177
+VA + +KY D VR+I L RN GKG A+R G+ SRGE +LM DADGATK D+EKL
Sbjct: 117 SKVALKYCQKYGSDKVRVITLVRNRGKGGAVRMGVFSSRGEKILMADADGATKFPDVEKL 176
Query: 178 ESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAHLEEKALATVQYCDCPRCFICI 237
E + D + IA GSRAHLE++++A R +
Sbjct: 177 EKGLS---------------DLQPWPEQMAIAC-GSRAHLEKESIAQ-------RSYFRT 213
Query: 238 FLFLCFSFTFHCLVEIL 254
FL + FH LV L
Sbjct: 214 FLM----YGFHFLVWFL 226
>sp|Q54J42|ALG5_DICDI Dolichyl-phosphate beta-glucosyltransferase OS=Dictyostelium
discoideum GN=alg5 PE=2 SV=1
Length = 327
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 120/219 (54%), Gaps = 32/219 (14%)
Query: 40 IEAPAIFEDPSSLKQVPCPSVT---DPAEK-YISLIIPAFNEEHRLPGALDETLNYLQQR 95
+E ++ D +Q PS+ +P + Y+S+I+PA+NE+ RLP LD+ + +L ++
Sbjct: 44 LEKENVYIDVKEGEQHQFPSLVENKNPIDNIYLSVIVPAYNEQIRLPSMLDDAIKFLNEK 103
Query: 96 AAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHS 155
+ KD F+YE++IIDDGS D T ++ ++ K N+R++ L +N GKG A+++G+L S
Sbjct: 104 SKKDLKFSYEIIIIDDGSKDSTAKLVTSYIEKQPSSNIRLLKLKQNRGKGGAVKRGILCS 163
Query: 156 RGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRA 215
RG+ LM+DADGAT+ D ++E +H + + +D+ I GSR+
Sbjct: 164 RGKYCLMVDADGATEFKDFNRVEDIMHKIEK-----------------NDLGIVC-GSRS 205
Query: 216 HLEEKALATVQYCDCPRCFICIFLFLCFSFTFHCLVEIL 254
HL + L R F+ L + FH V+ L
Sbjct: 206 HLVDSDLV------AKRSFLRNILM----YGFHIFVQTL 234
>sp|P40350|ALG5_YEAST Dolichyl-phosphate beta-glucosyltransferase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ALG5 PE=1
SV=1
Length = 334
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 19/187 (10%)
Query: 62 DPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVA 121
D E ++S++IP++NE R+ L + +++L+++ +E++I+DDGS+D T +
Sbjct: 69 DDEEIFLSVVIPSYNETGRILLMLTDAISFLKEKYGS----RWEIVIVDDGSTDNTTQYC 124
Query: 122 FDFVR---KYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLE 178
+ K + RII +N GKG A+R+G LH RG+ L DADGA+K +D+EKL
Sbjct: 125 LKICKEQFKLNYEQFRIIKFSQNRGKGGAVRQGFLHIRGKYGLFADADGASKFSDVEKL- 183
Query: 179 SQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAHLEEKALATVQYCDCPRCFICIF 238
I A+ + E + D T P A GSRAH+ A ++ C + F
Sbjct: 184 --IDAISKIETSSTDLKTTK--------PAVAIGSRAHMVNTE-AVIKRSMIRNCLMYGF 232
Query: 239 LFLCFSF 245
L F F
Sbjct: 233 HTLVFIF 239
>sp|O60061|ALG5_SCHPO Dolichyl-phosphate beta-glucosyltransferase OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=alg5 PE=3 SV=1
Length = 322
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 105/218 (48%), Gaps = 34/218 (15%)
Query: 41 EAPAIFEDPSSLKQVPCPSVTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDK 100
E +F + K + + I++I+PA+NE R+ L ET+++L++
Sbjct: 37 EETCVFIENGQKKSLTLEKWSTSDNIQITVIVPAYNESKRIGNMLQETVDHLEKYYRSSS 96
Query: 101 SF---TYEVLIIDDGSSDGTKRVAFDFVRKYTV-DNVRIILLGRNHGKGEAIRKGMLHSR 156
S +E+LI+DD S D T +F K + D++R+ L RN GKG A+ GML++R
Sbjct: 97 SAGQRRWEILIVDDESKDTTVNAVLEFSNKLDLRDHLRVCSLKRNRGKGGAVTWGMLYAR 156
Query: 157 GELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAH 216
G+ + DADGA++ +DLE L + R G V GSRAH
Sbjct: 157 GQYAIFADADGASQFSDLELLFKNMPPGPR-----GGVVV---------------GSRAH 196
Query: 217 LEEKALATVQYCDCPRCFICIFLFLCFSFTFHCLVEIL 254
+ A A V+ R FI FL C FH L++IL
Sbjct: 197 MVNTA-AVVK-----RSFIRNFLMHC----FHKLLQIL 224
>sp|B5XTK8|ARNC_KLEP3 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Klebsiella pneumoniae (strain 342) GN=arnC PE=3 SV=1
Length = 327
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 10/140 (7%)
Query: 60 VTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKR 119
+T P K +S++IP +NE+ LP L T A YE+L+IDDGSSD + R
Sbjct: 2 LTYPPVKKVSVVIPVYNEQDSLPELLRRT-----DTACATLGRQYEILLIDDGSSDDSAR 56
Query: 120 VAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDL----E 175
+ + +V +LL RN+G+ AI G H G+L++ LDAD ++ E
Sbjct: 57 MLTEAAEAEG-SHVVAVLLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVE 115
Query: 176 KLESQIHAVGRKEYNHGDSV 195
K + VG N DS+
Sbjct: 116 KADEGYDVVGTVRQNRQDSI 135
>sp|A6TF99|ARNC_KLEP7 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC
700721 / MGH 78578) GN=arnC PE=3 SV=1
Length = 327
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 10/140 (7%)
Query: 60 VTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKR 119
+T P K +S++IP +NE+ LP L T A YE+L+IDDGSSD + R
Sbjct: 2 LTYPPVKKVSVVIPVYNEQDSLPELLRRT-----DAACATLGRQYEILLIDDGSSDDSAR 56
Query: 120 VAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLES 179
+ + +V +LL RN+G+ AI G H G+L++ LDAD ++ +L +
Sbjct: 57 MLTEAAEAEG-SHVVAVLLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVA 115
Query: 180 QI----HAVGRKEYNHGDSV 195
+ VG N DS+
Sbjct: 116 KADEGYDVVGTVRQNRQDSI 135
>sp|B4ETL6|ARNC_PROMH Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Proteus mirabilis (strain HI4320) GN=arnC PE=3 SV=1
Length = 326
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 10/131 (7%)
Query: 68 ISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRK 127
+S++IP +NEE LP L+ T+ ++ K YE++++DDGSSD + ++ +
Sbjct: 10 VSVVIPVYNEEESLPQLLERTI-----KSCKQLEQEYELILVDDGSSDNSAKM-LEEAAN 63
Query: 128 YTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL----ESQIHA 183
++V I+L RN+G+ AI G + G+L++ LDAD ++ +L E
Sbjct: 64 IEDNHVIAIILNRNYGQHSAIMAGFNQADGDLVITLDADLQNPPEEIPRLVATAEEGYDV 123
Query: 184 VGRKEYNHGDS 194
VG + N DS
Sbjct: 124 VGTRRRNRQDS 134
>sp|B7N5L9|ARNC_ECOLU Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
GN=arnC PE=3 SV=1
Length = 322
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T +A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRT-----TKACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|Q57M56|ARNC_SALCH Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella choleraesuis (strain SC-B67) GN=arnC PE=3
SV=1
Length = 327
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + S +E+L+IDDGSSD + +
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLSKAWEILLIDDGSSDSSAELMVKAS 62
Query: 126 RKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ----I 181
++ ++ ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 63 QEAD-SHIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADEGF 121
Query: 182 HAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRA 215
VG N DS+ S +I ++ I +A
Sbjct: 122 DVVGTVRQNRQDSLFRKSASKIINLLIQRTTGKA 155
>sp|B7NNT3|ARNC_ECO7I Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=arnC
PE=3 SV=1
Length = 322
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 10/133 (7%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T +A + YE+L+IDDGSSD + + D
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRT-----TKACESLGKEYEILLIDDGSSDNSAHMLVD-A 61
Query: 126 RKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ----I 181
+ ++ ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 62 SQAEGSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADEGY 121
Query: 182 HAVGRKEYNHGDS 194
VG N DS
Sbjct: 122 DVVGTVRQNRQDS 134
>sp|B5YX45|ARNC_ECO5E Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli O157:H7 (strain EC4115 / EHEC)
GN=arnC PE=3 SV=1
Length = 322
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + + V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNSAHI---LV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|Q8XDZ5|ARNC_ECO57 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli O157:H7 GN=arnC PE=3 SV=1
Length = 322
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + + V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNSAHI---LV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|B7M5T6|ARNC_ECO8A Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli O8 (strain IAI1) GN=arnC PE=3 SV=1
Length = 322
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|A7ZP72|ARNC_ECO24 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli O139:H28 (strain E24377A / ETEC)
GN=arnC PE=3 SV=1
Length = 322
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|Q32DT4|ARNC_SHIDS Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Shigella dysenteriae serotype 1 (strain Sd197)
GN=arnC PE=3 SV=2
Length = 322
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|B1JJ29|ARNC_YERPY Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Yersinia pseudotuberculosis serotype O:3 (strain
YPIII) GN=arnC PE=3 SV=1
Length = 327
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 11/154 (7%)
Query: 59 SVTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTK 118
S+ +P +K +S++IP +NE+ LP +D T A K + YE++++DDGSSD +
Sbjct: 2 SLNEPIKK-VSIVIPVYNEQESLPALIDRT-----TAACKLLTQAYEIILVDDGSSDNST 55
Query: 119 RVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL- 177
+ ++ ILL RN+G+ AI G G+L++ LDAD ++ +L
Sbjct: 56 EL-LTAAANDPDSHIIAILLNRNYGQHSAIMAGFNQVSGDLIITLDADLQNPPEEIPRLV 114
Query: 178 ---ESQIHAVGRKEYNHGDSVTVDSTFRISDIPI 208
E VG N DS+ + R+ ++ I
Sbjct: 115 HVAEEGYDVVGTVRANRQDSLFRKTASRMINMMI 148
>sp|Q93PD9|ARNC_YERPS Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Yersinia pseudotuberculosis serotype I (strain
IP32953) GN=arnC PE=2 SV=1
Length = 327
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 11/154 (7%)
Query: 59 SVTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTK 118
S+ +P +K +S++IP +NE+ LP +D T A K + YE++++DDGSSD +
Sbjct: 2 SLNEPIKK-VSIVIPVYNEQESLPALIDRT-----TAACKLLTQAYEIILVDDGSSDNST 55
Query: 119 RVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL- 177
+ ++ ILL RN+G+ AI G G+L++ LDAD ++ +L
Sbjct: 56 EL-LTAAANDPDSHIIAILLNRNYGQHSAIMAGFNQVSGDLIITLDADLQNPPEEIPRLV 114
Query: 178 ---ESQIHAVGRKEYNHGDSVTVDSTFRISDIPI 208
E VG N DS+ + R+ ++ I
Sbjct: 115 HVAEEGYDVVGTVRANRQDSLFRKTASRMINMMI 148
>sp|A4TIM3|ARNC_YERPP Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Yersinia pestis (strain Pestoides F) GN=arnC PE=3
SV=1
Length = 327
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 11/154 (7%)
Query: 59 SVTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTK 118
S+ +P +K +S++IP +NE+ LP +D T A K + YE++++DDGSSD +
Sbjct: 2 SLNEPIKK-VSIVIPVYNEQESLPALIDRT-----TAACKLLTQAYEIILVDDGSSDNST 55
Query: 119 RVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL- 177
+ ++ ILL RN+G+ AI G G+L++ LDAD ++ +L
Sbjct: 56 EL-LTAAANDPDSHIIAILLNRNYGQHSAIMAGFNQVSGDLIITLDADLQNPPEEIPRLV 114
Query: 178 ---ESQIHAVGRKEYNHGDSVTVDSTFRISDIPI 208
E VG N DS+ + R+ ++ I
Sbjct: 115 HVAEEGYDVVGTVRANRQDSLFRKTASRMINMMI 148
>sp|B2K5L4|ARNC_YERPB Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Yersinia pseudotuberculosis serotype IB (strain
PB1/+) GN=arnC PE=3 SV=1
Length = 327
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 11/154 (7%)
Query: 59 SVTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTK 118
S+ +P +K +S++IP +NE+ LP +D T A K + YE++++DDGSSD +
Sbjct: 2 SLNEPIKK-VSIVIPVYNEQESLPALIDRT-----TAACKLLTQAYEIILVDDGSSDNST 55
Query: 119 RVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL- 177
+ ++ ILL RN+G+ AI G G+L++ LDAD ++ +L
Sbjct: 56 EL-LTAAANDPDSHIIAILLNRNYGQHSAIMAGFNQVSGDLIITLDADLQNPPEEIPRLV 114
Query: 178 ---ESQIHAVGRKEYNHGDSVTVDSTFRISDIPI 208
E VG N DS+ + R+ ++ I
Sbjct: 115 HVAEEGYDVVGTVRANRQDSLFRKTASRMINMMI 148
>sp|Q0T2M9|ARNC_SHIF8 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Shigella flexneri serotype 5b (strain 8401) GN=arnC
PE=3 SV=1
Length = 322
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|Q3YZV2|ARNC_SHISS Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Shigella sonnei (strain Ss046) GN=arnC PE=3 SV=1
Length = 322
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|Q31YK3|ARNC_SHIBS Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Shigella boydii serotype 4 (strain Sb227) GN=arnC
PE=3 SV=1
Length = 322
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|B6I7J7|ARNC_ECOSE Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli (strain SE11) GN=arnC PE=3 SV=1
Length = 322
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|P77757|ARNC_ECOLI Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli (strain K12) GN=arnC PE=1 SV=1
Length = 322
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|B1IXT3|ARNC_ECOLC Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli (strain ATCC 8739 / DSM 1576 /
Crooks) GN=arnC PE=3 SV=1
Length = 322
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|A8A2C1|ARNC_ECOHS Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli O9:H4 (strain HS) GN=arnC PE=3 SV=1
Length = 322
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|B1X8W7|ARNC_ECODH Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli (strain K12 / DH10B) GN=arnC PE=3
SV=1
Length = 322
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|C4ZU96|ARNC_ECOBW Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli (strain K12 / MC4100 / BW2952)
GN=arnC PE=3 SV=1
Length = 322
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|B7LAR9|ARNC_ECO55 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli (strain 55989 / EAEC) GN=arnC PE=3
SV=1
Length = 322
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|C3KAD3|ARNC_PSEFS Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Pseudomonas fluorescens (strain SBW25) GN=arnC PE=3
SV=1
Length = 341
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 7/135 (5%)
Query: 68 ISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRK 127
+S++IP +NE+ LP L T A K ++ YE++++DDGS D + ++ D +
Sbjct: 9 VSIVIPVYNEQESLPELLRRT-----TAACKQLAYEYEIILVDDGSRDNSAQLLEDAAAE 63
Query: 128 YTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRK 187
NV ++L RN+G+ AI G RG++++ LDAD ++ +L Q A+G
Sbjct: 64 -DGSNVVAVILNRNYGQHAAIMAGFEQCRGDVVITLDADLQNPPEEIPRLVEQA-ALGYD 121
Query: 188 EYNHGDSVTVDSTFR 202
+ DS FR
Sbjct: 122 VVATVRNNRQDSAFR 136
>sp|Q7UC63|ARNC_SHIFL Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Shigella flexneri GN=arnC PE=3 SV=2
Length = 322
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I IL+ RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILINRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|C0Q070|ARNC_SALPC Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella paratyphi C (strain RKS4594) GN=arnC PE=3
SV=1
Length = 327
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + +E+L+IDDGSSD + +
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKAWEILLIDDGSSDSSAELMVKAS 62
Query: 126 RKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ----I 181
++ ++ ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 63 QEAD-SHIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADEGF 121
Query: 182 HAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRA 215
VG N DS+ S +I ++ I +A
Sbjct: 122 DVVGTVRQNRQDSLFRKSASKIINLLIQRTTGKA 155
>sp|O52324|ARNC_SALTY Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC
700720) GN=arnC PE=2 SV=1
Length = 327
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + +E+L+IDDGSSD + +
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKAWEILLIDDGSSDSSAELMVKAS 62
Query: 126 RKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ----I 181
++ ++ ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 63 QEAD-SHIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADEGF 121
Query: 182 HAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRA 215
VG N DS+ S +I ++ I +A
Sbjct: 122 DVVGTVRQNRQDSLFRKSASKIINLLIQRTTGKA 155
>sp|B4TPI1|ARNC_SALSV Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella schwarzengrund (strain CVM19633) GN=arnC
PE=3 SV=1
Length = 327
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + +E+L+IDDGSSD + +
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKAWEILLIDDGSSDSSAELMVKAS 62
Query: 126 RKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ----I 181
++ ++ ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 63 QEAD-SHIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADEGF 121
Query: 182 HAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRA 215
VG N DS+ S +I ++ I +A
Sbjct: 122 DVVGTVRQNRQDSLFRKSASKIINLLIQRTTGKA 155
>sp|B4TBG5|ARNC_SALHS Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella heidelberg (strain SL476) GN=arnC PE=3
SV=1
Length = 327
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + +E+L+IDDGSSD + +
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKAWEILLIDDGSSDSSAELMVKAS 62
Query: 126 RKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ----I 181
++ ++ ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 63 QEAD-SHIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADEGF 121
Query: 182 HAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRA 215
VG N DS+ S +I ++ I +A
Sbjct: 122 DVVGTVRQNRQDSLFRKSASKIINLLIQRTTGKA 155
>sp|B5EZH7|ARNC_SALA4 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella agona (strain SL483) GN=arnC PE=3 SV=1
Length = 327
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + +E+L+IDDGSSD + +
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKAWEILLIDDGSSDSSAELMVKAS 62
Query: 126 RKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ----I 181
++ ++ ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 63 QEAD-SHIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADEGF 121
Query: 182 HAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRA 215
VG N DS+ S +I ++ I +A
Sbjct: 122 DVVGTVRQNRQDSLFRKSASKIINLLIQRTTGKA 155
>sp|Q1CIH6|ARNC_YERPN Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=arnC
PE=3 SV=1
Length = 327
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 59 SVTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTK 118
S+ +P +K +S++IP +NE+ LP +D T A K + YE++++DDGSSD +
Sbjct: 2 SLNEPIKK-VSIVIPVYNEQESLPALIDRT-----TAACKLLTQAYEIILVDDGSSDNST 55
Query: 119 RVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL- 177
+ ++ ILL RN+G+ AI G G+L++ LDAD + +L
Sbjct: 56 EL-LTAAANDPDSHIIAILLNRNYGQHSAIMAGFNQVSGDLIITLDADLQNPPEETPRLV 114
Query: 178 ---ESQIHAVGRKEYNHGDSVTVDSTFRISDIPI 208
E VG N DS+ + R+ ++ I
Sbjct: 115 HVAEEGYDVVGTVRANRQDSLFRKTASRMINMMI 148
>sp|A9R094|ARNC_YERPG Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Yersinia pestis bv. Antiqua (strain Angola) GN=arnC
PE=3 SV=1
Length = 327
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 59 SVTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTK 118
S+ +P +K +S++IP +NE+ LP +D T A K + YE++++DDGSSD +
Sbjct: 2 SLNEPIKK-VSIVIPVYNEQESLPALIDRT-----TAACKLLTQAYEIILVDDGSSDNST 55
Query: 119 RVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL- 177
+ ++ ILL RN+G+ AI G G+L++ LDAD + +L
Sbjct: 56 EL-LTAAANDPDSHIIAILLNRNYGQHSAIMAGFNQVSGDLIITLDADLQNPPEETPRLV 114
Query: 178 ---ESQIHAVGRKEYNHGDSVTVDSTFRISDIPI 208
E VG N DS+ + R+ ++ I
Sbjct: 115 HVAEEGYDVVGTVRANRQDSLFRKTASRMINMMI 148
>sp|Q8ZDX7|ARNC_YERPE Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Yersinia pestis GN=arnC PE=3 SV=1
Length = 327
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 59 SVTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTK 118
S+ +P +K +S++IP +NE+ LP +D T A K + YE++++DDGSSD +
Sbjct: 2 SLNEPIKK-VSIVIPVYNEQESLPALIDRT-----TAACKLLTQAYEIILVDDGSSDNST 55
Query: 119 RVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL- 177
+ ++ ILL RN+G+ AI G G+L++ LDAD + +L
Sbjct: 56 EL-LTAAANDPDSHIIAILLNRNYGQHSAIMAGFNQVSGDLIITLDADLQNPPEETPRLV 114
Query: 178 ---ESQIHAVGRKEYNHGDSVTVDSTFRISDIPI 208
E VG N DS+ + R+ ++ I
Sbjct: 115 HVAEEGYDVVGTVRANRQDSLFRKTASRMINMMI 148
>sp|Q1C741|ARNC_YERPA Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=arnC
PE=3 SV=1
Length = 327
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 59 SVTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTK 118
S+ +P +K +S++IP +NE+ LP +D T A K + YE++++DDGSSD +
Sbjct: 2 SLNEPIKK-VSIVIPVYNEQESLPALIDRT-----TAACKLLTQAYEIILVDDGSSDNST 55
Query: 119 RVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL- 177
+ ++ ILL RN+G+ AI G G+L++ LDAD + +L
Sbjct: 56 EL-LTAAANDPDSHIIAILLNRNYGQHSAIMAGFNQVSGDLIITLDADLQNPPEETPRLV 114
Query: 178 ---ESQIHAVGRKEYNHGDSVTVDSTFRISDIPI 208
E VG N DS+ + R+ ++ I
Sbjct: 115 HVAEEGYDVVGTVRANRQDSLFRKTASRMINMMI 148
>sp|Q8Z541|ARNC_SALTI Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella typhi GN=arnC PE=3 SV=1
Length = 327
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + +E+L+IDDGSSD + +
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKAWEILLIDDGSSDSSAELMVKAS 62
Query: 126 RKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ----I 181
++ ++ ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 63 QEAD-SHIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADEGF 121
Query: 182 HAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRA 215
VG N DS+ S +I ++ I +A
Sbjct: 122 DVVGTVRQNRQDSLFRKSASKIINLLIQRTTGKA 155
>sp|A9N5B3|ARNC_SALPB Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
GN=arnC PE=3 SV=1
Length = 327
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + +E+L+IDDGSSD + +
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKAWEILLIDDGSSDSSAELMVKAS 62
Query: 126 RKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ----I 181
++ ++ ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 63 QEAD-SHIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADEGF 121
Query: 182 HAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRA 215
VG N DS+ S +I ++ I +A
Sbjct: 122 DVVGTVRQNRQDSLFRKSASKIINLLIQRTTGKA 155
>sp|B4SYX0|ARNC_SALNS Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella newport (strain SL254) GN=arnC PE=3 SV=1
Length = 327
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + +E+L+IDDGSSD + +
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKAWEILLIDDGSSDSSAELMVKAS 62
Query: 126 RKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ----I 181
++ ++ ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 63 QEAD-SHIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADEGF 121
Query: 182 HAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRA 215
VG N DS+ S +I ++ I +A
Sbjct: 122 DVVGTVRQNRQDSLFRKSASKIINLLIQRTTGKA 155
>sp|B1LLK8|ARNC_ECOSM Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=arnC
PE=3 SV=1
Length = 322
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 10/133 (7%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T +A + YE+L+IDDGSSD + + +
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRT-----TKACESLGKEYEILLIDDGSSDNSAHMLVE-A 61
Query: 126 RKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ----I 181
+ ++ ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 62 SQAEGSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADEGY 121
Query: 182 HAVGRKEYNHGDS 194
VG N DS
Sbjct: 122 DVVGTVRQNRQDS 134
>sp|A8GDR6|ARNC_SERP5 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Serratia proteamaculans (strain 568) GN=arnC PE=3
SV=1
Length = 326
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP L+ T A K + YE++++DDGSSD + +
Sbjct: 8 KKVSVVIPVYNEQESLPALLERT-----TAACKQLTQPYEIILVDDGSSDNSADM-LTAA 61
Query: 126 RKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL----ESQI 181
+ V +LL RN+G+ AI G G+L++ LDAD ++ +L E
Sbjct: 62 AEQPGSCVIAVLLNRNYGQHSAIMAGFNQVSGDLVITLDADLQNPPEEIPRLVKVAEEGY 121
Query: 182 HAVGRKEYNHGDSVTVDSTFRISDIPI 208
VG N DS S RI ++ I
Sbjct: 122 DVVGTVRANRQDSWFRKSASRIINMMI 148
>sp|B5RCC3|ARNC_SALG2 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella gallinarum (strain 287/91 / NCTC 13346)
GN=arnC PE=3 SV=1
Length = 327
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + +E+L+IDDGSSD + +
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRT-----TAACESLGKAWEILLIDDGSSDSSAELMVKAS 62
Query: 126 RKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ----I 181
++ ++ ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 63 QEAD-SHIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADEGF 121
Query: 182 HAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRA 215
VG N DS+ S +I ++ I +A
Sbjct: 122 DVVGTVRQNRQDSLFRKSASKIINLLIQRTTGKA 155
>sp|B5R271|ARNC_SALEP Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella enteritidis PT4 (strain P125109) GN=arnC
PE=3 SV=1
Length = 327
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + +E+L+IDDGSSD + +
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRT-----TAACESLGKAWEILLIDDGSSDSSAELMVKAS 62
Query: 126 RKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ----I 181
++ ++ ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 63 QEAD-SHIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADEGF 121
Query: 182 HAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRA 215
VG N DS+ S +I ++ I +A
Sbjct: 122 DVVGTVRQNRQDSLFRKSASKIINLLIQRTTGKA 155
>sp|B5FNT8|ARNC_SALDC Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella dublin (strain CT_02021853) GN=arnC PE=3
SV=1
Length = 327
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + +E+L+IDDGSSD + +
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRT-----TAACESLGKAWEILLIDDGSSDSSAELMVKAS 62
Query: 126 RKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ----I 181
++ ++ ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 63 QEAD-SHIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADEGF 121
Query: 182 HAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRA 215
VG N DS+ S +I ++ I +A
Sbjct: 122 DVVGTVRQNRQDSLFRKSASKIINLLIQRTTGKA 155
>sp|A0KGY7|ARNC_AERHH Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC
7966 / NCIB 9240) GN=arnC PE=3 SV=1
Length = 326
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 16/136 (11%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDK-SFTYEVLIIDDGSSDGTKRVAFDF 124
K +S++IP +NEE LP L AA D+ S YEV++IDDGS DG+ + D
Sbjct: 7 KLVSVVIPVYNEEASLPALLSRVT------AACDQLSQNYEVILIDDGSHDGSTELIRDA 60
Query: 125 VRKYTVDNVRII--LLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL-ESQI 181
V+ +++ LL RN+G+ AI G ++G+L++ LDAD ++ +L E+ +
Sbjct: 61 A---AVEGSKLVGVLLNRNYGQHAAIMAGFETAKGDLVITLDADLQNPPEEIPRLVEAAM 117
Query: 182 HA---VGRKEYNHGDS 194
VG N DS
Sbjct: 118 QGYDVVGTMRRNRQDS 133
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.141 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,667,790
Number of Sequences: 539616
Number of extensions: 4455531
Number of successful extensions: 13866
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 120
Number of HSP's that attempted gapping in prelim test: 13508
Number of HSP's gapped (non-prelim): 219
length of query: 283
length of database: 191,569,459
effective HSP length: 116
effective length of query: 167
effective length of database: 128,974,003
effective search space: 21538658501
effective search space used: 21538658501
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)