Query 023346
Match_columns 283
No_of_seqs 307 out of 2769
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 05:15:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023346.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023346hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bcv_A Putative glycosyltransf 100.0 1.5E-28 5.2E-33 204.9 13.7 110 65-185 4-113 (240)
2 1qg8_A Protein (spore coat pol 100.0 1.5E-28 5.1E-33 206.9 10.8 121 66-197 1-129 (255)
3 1xhb_A Polypeptide N-acetylgal 99.9 7.9E-26 2.7E-30 206.9 15.9 118 63-189 26-147 (472)
4 2z86_A Chondroitin synthase; G 99.9 1E-25 3.5E-30 213.0 16.5 179 64-280 373-553 (625)
5 2d7i_A Polypeptide N-acetylgal 99.9 2.8E-26 9.7E-31 214.2 10.9 115 63-187 109-227 (570)
6 2ffu_A Ppgalnact-2, polypeptid 99.9 1.4E-24 4.9E-29 200.0 12.8 118 63-194 63-183 (501)
7 4hg6_A Cellulose synthase subu 99.9 1E-24 3.4E-29 210.8 12.0 124 62-196 136-278 (802)
8 3l7i_A Teichoic acid biosynthe 99.9 5.1E-26 1.7E-30 218.4 0.0 109 65-182 1-109 (729)
9 3ckj_A Putative uncharacterize 99.9 3.6E-24 1.2E-28 187.1 9.7 124 63-195 45-171 (329)
10 4fix_A UDP-galactofuranosyl tr 99.9 1.4E-23 4.8E-28 198.0 9.4 129 63-199 177-311 (657)
11 2z86_A Chondroitin synthase; G 99.9 1.5E-22 5.1E-27 191.3 15.0 120 64-194 91-212 (625)
12 3f1y_A Mannosyl-3-phosphoglyce 99.9 1.7E-23 5.7E-28 186.0 7.5 125 65-194 93-218 (387)
13 2nxv_A ATP synthase subunits r 99.7 8.4E-18 2.9E-22 141.0 9.6 95 64-190 14-112 (249)
14 2bo4_A Mannosylglycerate synth 99.7 2.2E-16 7.4E-21 140.1 13.5 114 69-192 2-127 (397)
15 2fy7_A Beta-1,4-galactosyltran 99.7 9.9E-17 3.4E-21 136.8 8.7 80 64-173 63-146 (287)
16 2wvl_A Mannosyl-3-phosphoglyce 99.6 2E-15 6.8E-20 128.7 11.0 99 65-177 52-180 (391)
17 2zu9_A Mannosyl-3-phosphoglyce 99.5 5.3E-14 1.8E-18 123.2 12.1 104 67-183 52-186 (394)
18 1fo8_A Alpha-1,3-mannosyl-glyc 99.2 3.1E-11 1.1E-15 104.8 7.5 110 67-188 3-134 (343)
19 3lw6_A FI08434P, beta-4-galact 96.9 0.0031 1.1E-07 52.3 8.0 78 63-170 48-127 (287)
20 3cu0_A Galactosylgalactosylxyl 96.8 0.011 3.8E-07 48.8 10.1 102 62-177 17-153 (281)
21 1v84_A Galactosylgalactosylxyl 96.7 0.011 3.9E-07 48.2 9.7 100 65-178 2-128 (253)
22 3k8d_A 3-deoxy-manno-octuloson 96.2 0.064 2.2E-06 44.5 11.6 105 65-185 16-136 (264)
23 3oam_A 3-deoxy-manno-octuloson 96.2 0.11 3.9E-06 42.5 13.1 72 104-185 43-120 (252)
24 2d0j_A Galactosylgalactosylxyl 96.0 0.029 1E-06 45.6 8.4 101 65-177 2-121 (246)
25 3tqd_A 3-deoxy-manno-octuloson 95.9 0.13 4.6E-06 42.3 12.1 104 67-186 9-128 (256)
26 1qwj_A Cytidine monophospho-N- 95.8 0.17 5.9E-06 40.7 12.5 74 104-186 45-125 (229)
27 1h7e_A 3-deoxy-manno-octuloson 95.2 0.42 1.4E-05 38.6 12.8 71 104-184 44-117 (245)
28 1omz_A Alpha-1,4-N-acetylhexos 95.1 0.018 6.3E-07 48.2 4.2 117 63-192 25-142 (293)
29 1ezi_A CMP-N-acetylneuraminic 94.7 0.16 5.4E-06 40.8 8.8 72 104-184 46-125 (228)
30 4fcu_A 3-deoxy-manno-octuloson 94.4 0.85 2.9E-05 37.4 12.6 74 103-186 42-121 (253)
31 1vgw_A 4-diphosphocytidyl-2C-m 94.0 1.1 3.9E-05 35.5 12.5 75 104-185 51-133 (231)
32 2wee_A MOBA-related protein; u 93.7 0.13 4.4E-06 40.1 6.1 87 77-180 30-120 (197)
33 2y6p_A 3-deoxy-manno-octuloson 93.5 0.78 2.7E-05 36.6 10.8 44 141-185 71-115 (234)
34 2waw_A MOBA relate protein; un 93.5 0.21 7.1E-06 38.9 7.0 70 104-180 47-120 (199)
35 2yc3_A 2-C-methyl-D-erythritol 93.4 1.3 4.5E-05 35.1 11.8 76 104-185 49-127 (228)
36 3ngw_A Molybdopterin-guanine d 93.3 0.4 1.4E-05 38.0 8.5 86 76-184 24-111 (208)
37 3juk_A UDP-glucose pyrophospho 92.9 0.14 4.7E-06 42.6 5.4 55 132-186 96-154 (281)
38 3st8_A Bifunctional protein GL 92.4 0.74 2.5E-05 41.7 9.9 106 71-188 34-143 (501)
39 1vic_A 3-deoxy-manno-octuloson 92.3 1.9 6.4E-05 35.2 11.5 89 77-185 26-120 (262)
40 4fce_A Bifunctional protein GL 92.3 0.33 1.1E-05 43.2 7.4 89 78-183 36-126 (459)
41 4ecm_A Glucose-1-phosphate thy 91.7 0.58 2E-05 38.5 7.7 54 132-186 98-151 (269)
42 3d5n_A Q97W15_sulso; NESG, SSR 91.7 0.11 3.7E-06 40.9 3.1 49 132-181 61-112 (197)
43 2c0n_A A197; thermophil protei 91.6 0.58 2E-05 36.6 7.0 35 144-178 37-78 (203)
44 2vsh_A TARI, 2-C-methyl-D-eryt 91.6 2.5 8.6E-05 33.5 11.4 45 141-185 83-135 (236)
45 1i52_A 4-diphosphocytidyl-2-C- 91.4 0.96 3.3E-05 36.2 8.7 76 103-185 51-128 (236)
46 3pnn_A Conserved domain protei 91.4 0.62 2.1E-05 39.2 7.7 100 71-183 25-141 (303)
47 1e5k_A Molybdopterin-guanine d 90.9 0.42 1.4E-05 37.6 5.8 49 132-180 65-116 (201)
48 2ux8_A Glucose-1-phosphate uri 90.7 0.38 1.3E-05 40.2 5.7 54 132-185 107-162 (297)
49 2qh5_A PMI, ALGA, mannose-6-ph 90.4 2.4 8.1E-05 35.6 10.5 95 72-180 31-128 (308)
50 3rsb_A Adenosylcobinamide-phos 90.3 0.16 5.5E-06 39.6 2.9 92 77-183 26-119 (196)
51 3f1c_A Putative 2-C-methyl-D-e 90.2 1.3 4.4E-05 35.9 8.4 97 76-186 30-135 (246)
52 3q80_A 2-C-methyl-D-erythritol 89.9 3.4 0.00012 33.1 10.6 90 76-183 33-127 (231)
53 1fxo_A Glucose-1-phosphate thy 89.7 1.1 3.9E-05 37.4 7.9 98 72-184 28-128 (293)
54 2v0h_A Bifunctional protein GL 89.7 1.1 3.6E-05 39.9 8.1 89 78-183 33-123 (456)
55 2e8b_A Probable molybdopterin- 89.6 6 0.00021 30.7 12.2 94 66-178 13-120 (201)
56 1hm9_A GLMU, UDP-N-acetylgluco 89.5 0.93 3.2E-05 40.4 7.6 91 78-186 39-132 (468)
57 2xwl_A 2-C-methyl-D-erythritol 89.2 3.8 0.00013 32.1 10.4 88 77-181 29-118 (223)
58 1lvw_A Glucose-1-phosphate thy 88.2 2.1 7.3E-05 35.8 8.5 99 71-185 28-130 (295)
59 2e3d_A UTP--glucose-1-phosphat 87.8 0.98 3.3E-05 37.8 6.2 55 132-186 103-164 (302)
60 1w55_A ISPD/ISPF bifunctional 85.5 1.4 4.8E-05 38.3 6.0 50 133-184 67-117 (371)
61 2dpw_A Hypothetical protein TT 84.5 3.2 0.00011 33.1 7.4 77 76-179 30-107 (232)
62 2pa4_A UTP-glucose-1-phosphate 83.9 2.5 8.4E-05 35.8 6.8 54 132-185 106-162 (323)
63 1vpa_A 2-C-methyl-D-erythritol 83.1 7.2 0.00025 30.8 9.0 93 76-184 39-135 (234)
64 1mc3_A Glucose-1-phosphate thy 80.7 1.6 5.4E-05 36.6 4.3 96 72-183 29-128 (296)
65 3tzt_A Glycosyl transferase fa 78.9 7.8 0.00027 31.9 8.0 105 66-179 4-122 (276)
66 2xme_A CTP-inositol-1-phosphat 78.4 4.1 0.00014 32.3 6.0 70 104-179 60-130 (232)
67 3brk_X Glucose-1-phosphate ade 76.7 4.8 0.00016 35.3 6.4 100 73-186 39-154 (420)
68 2gak_A Beta-1,6-N-acetylglucos 76.5 9.2 0.00031 33.3 8.0 103 65-179 83-197 (391)
69 1yp2_A Glucose-1-phosphate ade 75.9 18 0.00062 31.8 10.0 103 73-186 47-164 (451)
70 2x65_A Mannose-1-phosphate gua 75.1 8.9 0.00031 32.6 7.5 95 72-180 28-124 (336)
71 1tzf_A Glucose-1-phosphate cyt 73.1 21 0.0007 28.5 9.0 47 139-186 103-150 (259)
72 1g9r_A Glycosyl transferase; a 64.6 6.1 0.00021 33.2 4.1 79 99-179 26-117 (311)
73 2px7_A 2-C-methyl-D-erythritol 63.3 15 0.00051 29.2 6.0 52 132-185 83-135 (236)
74 2i5e_A Hypothetical protein MM 62.7 24 0.00083 27.3 7.1 45 132-179 66-111 (211)
75 3cgx_A Putative nucleotide-dip 58.9 54 0.0018 26.2 8.7 50 133-183 77-130 (242)
76 3kcq_A Phosphoribosylglycinami 48.5 92 0.0031 24.5 8.2 68 103-177 35-103 (215)
77 1jyk_A LICC protein, CTP:phosp 45.6 40 0.0014 27.0 5.9 65 104-177 72-138 (254)
78 4evw_A Nucleoside-diphosphate- 44.9 69 0.0023 25.6 7.2 72 104-176 47-125 (255)
79 3rht_A (gatase1)-like protein; 39.5 79 0.0027 25.7 6.7 76 105-187 6-82 (259)
80 3mvn_A UDP-N-acetylmuramate:L- 35.3 1.2E+02 0.0039 22.3 6.7 59 108-166 39-102 (163)
81 1ll2_A Glycogenin-1; protein-s 34.2 83 0.0028 26.5 6.2 18 155-172 93-110 (333)
82 2h4a_A YRAM (HI1655); perplasm 34.1 1E+02 0.0034 25.7 6.8 63 67-140 2-64 (325)
83 2ggo_A 401AA long hypothetical 34.1 20 0.00069 30.8 2.4 82 77-179 30-113 (401)
84 4f11_A Gamma-aminobutyric acid 31.3 2.2E+02 0.0076 24.2 8.8 89 64-155 13-108 (433)
85 4ds3_A Phosphoribosylglycinami 30.7 1.8E+02 0.006 22.7 7.2 31 146-176 76-106 (209)
86 1wd5_A Hypothetical protein TT 29.3 1.4E+02 0.0048 22.9 6.5 63 102-169 119-182 (208)
87 3da8_A Probable 5'-phosphoribo 27.8 2.2E+02 0.0075 22.2 7.5 32 146-177 79-110 (215)
88 4grd_A N5-CAIR mutase, phospho 26.9 96 0.0033 23.5 4.7 103 62-178 9-113 (173)
89 3u2u_A Glycogenin-1, GN-1, GN1 26.1 64 0.0022 26.2 4.0 17 156-172 95-111 (263)
90 3ckm_A YRAM (HI1655), LPOA; pe 25.1 1.5E+02 0.005 24.3 6.3 62 67-139 4-65 (327)
91 2cu2_A Putative mannose-1-phos 23.4 1E+02 0.0036 25.8 5.0 47 136-182 76-126 (337)
92 3i09_A Periplasmic branched-ch 23.0 3.2E+02 0.011 22.5 11.0 95 65-162 4-101 (375)
No 1
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.96 E-value=1.5e-28 Score=204.87 Aligned_cols=110 Identities=24% Similarity=0.380 Sum_probs=103.6
Q ss_pred CceEEEEEeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCH
Q 023346 65 EKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGK 144 (283)
Q Consensus 65 ~p~vsviip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~gk 144 (283)
.|+||||||+||+++.|++||+|+++ |+++++|||||||||+|+|.++++++.++++ ++++++. +|.|+
T Consensus 4 ~p~vsViIp~yn~~~~l~~~l~Sl~~--------q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~--~i~~i~~-~n~G~ 72 (240)
T 3bcv_A 4 IPKVSVIVPIYNVEKYLDQCVQALLA--------QTLSDIEIILIDDESPDNCPKICDDYAAQYP--NIKVIHK-KNAGL 72 (240)
T ss_dssp CCSEEEEEEESSCTTTHHHHHHHHHT--------CSSSSEEEEEEECCCSSSHHHHHHHHHHHCS--SEEEEEC-CCCCH
T ss_pred CCcEEEEEecCCCHHHHHHHHHHHHh--------CcCCCeEEEEEECCCCcCHHHHHHHHHhhCC--CEEEEEC-CCCCh
Confidence 57799999999999999999999998 7788999999999999999999999998887 8999985 59999
Q ss_pred HHHHHHHHHHcCCCEEEEEeCCCCCChhhHHHHHHHHHHcC
Q 023346 145 GEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVG 185 (283)
Q Consensus 145 ~~a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~~~~~~~~~~ 185 (283)
+.|+|.|+++|+||||+|+|+|+.++|++|+++++.+++.+
T Consensus 73 ~~a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~ 113 (240)
T 3bcv_A 73 GMACNSGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKYT 113 (240)
T ss_dssp HHHHHHHHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999998853
No 2
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.95 E-value=1.5e-28 Score=206.88 Aligned_cols=121 Identities=19% Similarity=0.250 Sum_probs=111.1
Q ss_pred ceEEEEEeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcC------
Q 023346 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG------ 139 (283)
Q Consensus 66 p~vsviip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~------ 139 (283)
|+||||||+||+++.|.+||+|+++ |+++++|||||||||+|+|.++++++.. .+ +++++..+
T Consensus 1 p~vSViIp~yn~~~~l~~~l~Sl~~--------q~~~~~eiivvDd~S~d~t~~~~~~~~~-~~--~i~~i~~~~~~~~~ 69 (255)
T 1qg8_A 1 PKVSVIMTSYNKSDYVAKSISSILS--------QTFSDFELFIMDDNSNEETLNVIRPFLN-DN--RVRFYQSDISGVKE 69 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHT--------CSCCCEEEEEEECSCCHHHHHHHGGGGG-ST--TEEEEECCCCSHHH
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHh--------ccCCceEEEEEECCCCchHHHHHHHHhh-cC--CEEEEecccccccc
Confidence 5799999999999999999999998 7888999999999999999999998866 44 89999998
Q ss_pred --CCCCHHHHHHHHHHHcCCCEEEEEeCCCCCChhhHHHHHHHHHHcCCcccccccceee
Q 023346 140 --RNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVTV 197 (283)
Q Consensus 140 --~~~gk~~a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 197 (283)
+|.|++.|+|.|+++|+||||+|+|+|+.+.|++|+++++.++++++.+++++.....
T Consensus 70 ~~~n~G~~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~ 129 (255)
T 1qg8_A 70 RTEKTRYAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTY 129 (255)
T ss_dssp HHSSCHHHHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEE
T ss_pred cccccCHHHHHHHHHHHcCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEE
Confidence 7999999999999999999999999999999999999999999988887777766544
No 3
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.93 E-value=7.9e-26 Score=206.94 Aligned_cols=118 Identities=26% Similarity=0.286 Sum_probs=106.9
Q ss_pred CCCceEEEEEeecCCC-CChHHHHHHHHHHHHHhhhcCCCCc--eEEEEEeCCCCcc-hHHHHHHHHHHcCCCcEEEEEc
Q 023346 63 PAEKYISLIIPAFNEE-HRLPGALDETLNYLQQRAAKDKSFT--YEVLIIDDGSSDG-TKRVAFDFVRKYTVDNVRIILL 138 (283)
Q Consensus 63 ~~~p~vsviip~~ne~-~~l~~~l~s~~~~~~~~~~~~~~~~--~eiivvdd~s~d~-t~~~~~~~~~~~~~~~~~~~~~ 138 (283)
...|+||||||+||++ +.|.++|+|+++ |+++. +|||||||||+|+ |.++++++.++++ .++++++.
T Consensus 26 ~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~--------q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~-~~v~vi~~ 96 (472)
T 1xhb_A 26 DNLPTTSVVIVFHNEAWSTLLRTVHSVIN--------RSPRHMIEEIVLVDDASERDFLKRPLESYVKKLK-VPVHVIRM 96 (472)
T ss_dssp SCCCCEEEEEEESSCCHHHHHHHHHHHHH--------SSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSS-SCEEEEEC
T ss_pred cCCCCeEEEEEeCCCCHHHHHHHHHHHHh--------cCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCC-CcEEEEEC
Confidence 4678999999999999 999999999998 56555 6999999999995 9999999877664 36999999
Q ss_pred CCCCCHHHHHHHHHHHcCCCEEEEEeCCCCCChhhHHHHHHHHHHcCCccc
Q 023346 139 GRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEY 189 (283)
Q Consensus 139 ~~~~gk~~a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~ 189 (283)
++|.|++.|+|.|+++|+||||+|+|+|+.++|++|+++++.+++++...+
T Consensus 97 ~~n~G~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v 147 (472)
T 1xhb_A 97 EQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVV 147 (472)
T ss_dssp SSCCCHHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEE
T ss_pred CCCCChHHHHHHHHHhccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEE
Confidence 999999999999999999999999999999999999999999998876643
No 4
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.93 E-value=1e-25 Score=212.97 Aligned_cols=179 Identities=19% Similarity=0.224 Sum_probs=137.0
Q ss_pred CCceEEEEEeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCC
Q 023346 64 AEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHG 143 (283)
Q Consensus 64 ~~p~vsviip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~g 143 (283)
..|.||||||+||+++.|.+||+|+++ |+++++|||||||||+|+|.++++++..+++ +++++. .+|.|
T Consensus 373 ~~~~vsiii~~yn~~~~l~~~l~s~~~--------q~~~~~eiivvdd~S~d~t~~~~~~~~~~~~--~i~~~~-~~n~G 441 (625)
T 2z86_A 373 RVPLVSIYIPAYNCSKYIVRCVESALN--------QTITDLEVCICDDGSTDDTLRILQEHYANHP--RVRFIS-QKNKG 441 (625)
T ss_dssp SSCSEEEEEEESSCTTTHHHHHHHHHS--------SSCCSEEEEEEEESCSSSHHHHHHHHHTTCT--TEEEEE-ECCCC
T ss_pred cCCeEEEEEeCCCCHHHHHHHHHHHHh--------CcCCCeEEEEEECcCChhHHHHHHHHHhhCC--cEEEEe-CCCCC
Confidence 467899999999999999999999998 7888999999999999999999999887776 899997 56999
Q ss_pred HHHHHHHHHHHcCCCEEEEEeCCCCCChhhHHHHHHHHHHcCCcccccccceeecCccccCCCceeeecccccccchhhh
Q 023346 144 KGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAHLEEKALA 223 (283)
Q Consensus 144 k~~a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 223 (283)
++.|+|.|+++|+||||+++|+|+.+.|++|+++++.+.++++.+++++.....+..... ......... ..
T Consensus 442 ~~~a~n~g~~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-------~~~~~~~~~--~~ 512 (625)
T 2z86_A 442 IGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNL-------ISNGYNWPI--YS 512 (625)
T ss_dssp HHHHHHHHHHHCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCE-------EEECCCCSS--CC
T ss_pred HHHHHHHHHHhcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCE-------eccCccccc--CC
Confidence 999999999999999999999999999999999999999888877776655444432211 000000000 00
Q ss_pred hcccccCCccccccccceeEeeccceeeeehhhccccccc--cccCCCCCCcccccccc
Q 023346 224 TVQYCDCPRCFICIFLFLCFSFTFHCLVEILHLISEEVVP--QFFDEGFPSCCYLDCWS 280 (283)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--ggFde~~~~~eD~d~w~ 280 (283)
...... .+..+ .+.+++++.+. |||||.+.++||+|||.
T Consensus 513 ~~~~~~------------~~~~~------~~~~~~r~~~~~~ggfd~~~~~~eD~dl~~ 553 (625)
T 2z86_A 513 REKLTS------------AMICH------HFRMFTARAWNLTEGFNESISNAVDYDMYL 553 (625)
T ss_dssp HHHHTT------------SCCCC------SCEEEEHHHHTTTTCCCSSCSSCHHHHHHH
T ss_pred HHHHhh------------cccCC------ceEEEEHHHHHHhCCCCCccCChHHHHHHH
Confidence 000000 01111 11345666777 99999999999999984
No 5
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.93 E-value=2.8e-26 Score=214.24 Aligned_cols=115 Identities=23% Similarity=0.293 Sum_probs=105.9
Q ss_pred CCCceEEEEEeecCCC-CChHHHHHHHHHHHHHhhhcCCCCc--eEEEEEeCCCCcch-HHHHHHHHHHcCCCcEEEEEc
Q 023346 63 PAEKYISLIIPAFNEE-HRLPGALDETLNYLQQRAAKDKSFT--YEVLIIDDGSSDGT-KRVAFDFVRKYTVDNVRIILL 138 (283)
Q Consensus 63 ~~~p~vsviip~~ne~-~~l~~~l~s~~~~~~~~~~~~~~~~--~eiivvdd~s~d~t-~~~~~~~~~~~~~~~~~~~~~ 138 (283)
...|+||||||+||++ +.|.++|+|+++ |+++. +|||||||||+|+| .++++++.++++ ++++++.
T Consensus 109 ~~~P~vSVIIp~yNe~~~~L~~~L~Sll~--------qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~--~v~vi~~ 178 (570)
T 2d7i_A 109 ETLPNTSIIIPFHNEGWSSLLRTVHSVLN--------RSPPELVAEIVLVDDFSDREHLKKPLEDYMALFP--SVRILRT 178 (570)
T ss_dssp SSCCCEEEEEEESSCCHHHHHHHHHHHHH--------HSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTST--TEEEEEC
T ss_pred CCCCCeEEEEEECCCCHHHHHHHHHHHHh--------cCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCC--eEEEEEC
Confidence 4578999999999999 999999999998 45544 59999999999999 899999988776 8999999
Q ss_pred CCCCCHHHHHHHHHHHcCCCEEEEEeCCCCCChhhHHHHHHHHHHcCCc
Q 023346 139 GRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRK 187 (283)
Q Consensus 139 ~~~~gk~~a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~~~~~~~~~~~~ 187 (283)
++|.|++.|+|.|+++|+||||+|+|+|+.+.|++|+++++.+.+++..
T Consensus 179 ~~n~G~~~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~ 227 (570)
T 2d7i_A 179 KKREGLIRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKT 227 (570)
T ss_dssp SSCCCHHHHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTE
T ss_pred CCCCCHHHHHHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCCCE
Confidence 9999999999999999999999999999999999999999999987765
No 6
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.91 E-value=1.4e-24 Score=200.02 Aligned_cols=118 Identities=19% Similarity=0.186 Sum_probs=102.4
Q ss_pred CCCceEEEEEeecCCCC-ChHHHHHHHHHHHHHhhhcCCCCc--eEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcC
Q 023346 63 PAEKYISLIIPAFNEEH-RLPGALDETLNYLQQRAAKDKSFT--YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG 139 (283)
Q Consensus 63 ~~~p~vsviip~~ne~~-~l~~~l~s~~~~~~~~~~~~~~~~--~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~ 139 (283)
...|.||||||+||++. .|.++|+|+++ |+++. +|||||||||+|+|.+.+ .++++ ++++++.+
T Consensus 63 ~~~p~vSVIIp~yN~~~~~L~~~l~Sl~~--------q~~~~~~~EIIvVDDgS~D~t~~~~---~~~~~--~v~vi~~~ 129 (501)
T 2ffu_A 63 VDLPATSVVITFHNEARSALLRTVVSVLK--------KSPPHLIKEIILVDDYSNDPEDGAL---LGKIE--KVRVLRND 129 (501)
T ss_dssp SSCCCEEEEEEESSCCHHHHHHHHHHHHH--------HSCGGGEEEEEEEECSCSCTHHHHG---GGGBT--TEEEEECS
T ss_pred cCCCCEEEEEEeCcCcHHHHHHHHHHHHh--------hCchhhceeEEEEECCCCchHHHHH---HhcCC--CEEEEECC
Confidence 45789999999999997 99999999998 44444 699999999999996432 34566 89999999
Q ss_pred CCCCHHHHHHHHHHHcCCCEEEEEeCCCCCChhhHHHHHHHHHHcCCcccccccc
Q 023346 140 RNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDS 194 (283)
Q Consensus 140 ~~~gk~~a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 194 (283)
+|.|++.|+|.|+++|+||||+|+|+|+.++|++|+++++.+.+++.. ++++..
T Consensus 130 ~n~G~~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~-vv~~~~ 183 (501)
T 2ffu_A 130 RREGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTR-VVSPII 183 (501)
T ss_dssp SCCHHHHHHHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTE-EEEEEE
T ss_pred CCcCHHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhCCCe-EEEeee
Confidence 999999999999999999999999999999999999999999987764 444443
No 7
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=99.91 E-value=1e-24 Score=210.81 Aligned_cols=124 Identities=19% Similarity=0.217 Sum_probs=103.2
Q ss_pred CCCCceEEEEEeecCCCCCh-HHHHHHHHHHHHHhhhcCCCCc--eEEEEEeCCCCcchH---------------HHHHH
Q 023346 62 DPAEKYISLIIPAFNEEHRL-PGALDETLNYLQQRAAKDKSFT--YEVLIIDDGSSDGTK---------------RVAFD 123 (283)
Q Consensus 62 ~~~~p~vsviip~~ne~~~l-~~~l~s~~~~~~~~~~~~~~~~--~eiivvdd~s~d~t~---------------~~~~~ 123 (283)
++..|+|||+||+|||++.+ ++||+|+++ |++++ +||+||||||+|+|. +.+++
T Consensus 136 ~~~~P~VSViIPtyNe~~~lL~~~L~Sl~~--------q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~ 207 (802)
T 4hg6_A 136 PEELPTVDILVPSYNEPADMLSVTLAAAKN--------MIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQ 207 (802)
T ss_dssp TTTCCCEEEEEECTTCCHHHHHHHHHHHHT--------SSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHH
T ss_pred ccCCCcEEEEEEECCCCHHHHHHHHHHHHh--------ccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHH
Confidence 45578999999999999766 899999988 55554 999999999999993 34455
Q ss_pred HHHHcCCCcEEEEEcCCC-CCHHHHHHHHHHHcCCCEEEEEeCCCCCChhhHHHHHHHHHHcCCccccccccee
Q 023346 124 FVRKYTVDNVRIILLGRN-HGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVT 196 (283)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~-~gk~~a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 196 (283)
+.++. +++++..+++ .||+.|+|.|+++++||||+++|+|+.++|++|+++++.+.++++.+++.+....
T Consensus 208 ~~~~~---~v~~i~~~~~~~GKa~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~ 278 (802)
T 4hg6_A 208 LCREL---GVVYSTRERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFF 278 (802)
T ss_dssp HHHHH---TCEEEECSSCCSHHHHHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCB
T ss_pred HHHhc---CcEEEEecCCCCcchHHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEE
Confidence 55554 4778877765 7899999999999999999999999999999999999999888887766654433
No 8
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.91 E-value=5.1e-26 Score=218.44 Aligned_cols=109 Identities=21% Similarity=0.425 Sum_probs=0.0
Q ss_pred CceEEEEEeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCH
Q 023346 65 EKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGK 144 (283)
Q Consensus 65 ~p~vsviip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~gk 144 (283)
+|+||||||+||+++.|++||+|+++ |+++++|||||||||+|+|.++++++.++++ .+++++..++|.|.
T Consensus 1 Mp~vSVIIp~yN~~~~L~~~L~Sll~--------Qt~~~~EIIVVDDgStD~t~~il~~~~~~~~-~~i~~i~~~~n~G~ 71 (729)
T 3l7i_A 1 MNKLTIIVTYYNAEEYITGCLESIKQ--------QRTQDFNLIIVNDGSTDQSKKLMDEAIKDYD-KNIRFIDLDENSGH 71 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEEEcCCCHHHHHHHHHHHHh--------CCCCCeEEEEEECCCCCcHHHHHHHHHHhCC-CCEEEEECCCCCCH
Confidence 36799999999999999999999998 6677999999999999999999999987754 38999999889999
Q ss_pred HHHHHHHHHHcCCCEEEEEeCCCCCChhhHHHHHHHHH
Q 023346 145 GEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIH 182 (283)
Q Consensus 145 ~~a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~~~~~~~ 182 (283)
+.|+|.|++.|+||||+|+|+|+.+.|++|+++++.+.
T Consensus 72 ~~arN~gi~~A~gdyI~flD~Dd~~~p~~l~~l~~~l~ 109 (729)
T 3l7i_A 72 AHARNIALEEVETPYFMFLDADDELASYAITFYLEKFN 109 (729)
T ss_dssp --------------------------------------
T ss_pred HHHHHHHHHhccCCEEEEECCCCCCChhHHHHHHHHhc
Confidence 99999999999999999999999999999999999998
No 9
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.90 E-value=3.6e-24 Score=187.10 Aligned_cols=124 Identities=21% Similarity=0.264 Sum_probs=103.3
Q ss_pred CCCceEEEEEeecCCCCChHHHHHHHHHHHHHhhhcCCCC-ceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEE-cCC
Q 023346 63 PAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSF-TYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIIL-LGR 140 (283)
Q Consensus 63 ~~~p~vsviip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~-~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~-~~~ 140 (283)
...|+||||||+||+++.|.++|+|+++ |.++ .+|||||||||+|+|.++++++..+.. .+++++. .++
T Consensus 45 ~~~~~vSViIp~yN~~~~l~~~l~sl~~--------q~~~~~~eiivVDdgS~D~t~~~~~~~~~~~~-~~~~~~~~~~~ 115 (329)
T 3ckj_A 45 KAGRTISVVLPALDEEDTIGSVIDSISP--------LVDGLVDELIVLDSGSTDDTEIRAVAAGARVV-SREQALPEVPI 115 (329)
T ss_dssp TTTCCEEEEEEESSCTTTHHHHHHHHGG--------GBTTTBSEEEEEECSCCSSHHHHHHHTTCEEE-EHHHHCTTSCC
T ss_pred ccCCcEEEEEeeCCCHHHHHHHHHHHHH--------hhCCCCcEEEEEeCCCCchHHHHHHHhhhhhc-cceeeeccCCC
Confidence 3468899999999999999999999998 5554 599999999999999999988743211 0222232 567
Q ss_pred CCCHHHHHHHHHHHcCCCEEEEEeCCCC-CChhhHHHHHHHHHHcCCcccccccce
Q 023346 141 NHGKGEAIRKGMLHSRGELLLMLDADGA-TKVTDLEKLESQIHAVGRKEYNHGDSV 195 (283)
Q Consensus 141 ~~gk~~a~n~g~~~a~~d~i~~~D~D~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~ 195 (283)
|.|++.|+|.|++.|+||||+|+|+|+. ++|++|+++++.+.++++.++++|...
T Consensus 116 n~G~~~a~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~ 171 (329)
T 3ckj_A 116 RPGKGEALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYR 171 (329)
T ss_dssp CCSHHHHHHHHHHHCCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEE
T ss_pred CCCHHHHHHHHHHhCCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEec
Confidence 9999999999999999999999999999 899999999999888877776666543
No 10
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.89 E-value=1.4e-23 Score=198.01 Aligned_cols=129 Identities=16% Similarity=0.142 Sum_probs=104.3
Q ss_pred CCCceEEEEEeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcc--hHHHHHHHHHHcCCCcEEEEEcCC
Q 023346 63 PAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDG--TKRVAFDFVRKYTVDNVRIILLGR 140 (283)
Q Consensus 63 ~~~p~vsviip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~--t~~~~~~~~~~~~~~~~~~~~~~~ 140 (283)
+..|+||||||+||+++.|.+||+|+.+|.+. ....+|||||||||+|+ +..+.+......+ +++++.++
T Consensus 177 ~~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~-----~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~~--~I~vI~~~- 248 (657)
T 4fix_A 177 PGTANIAVGIPTFNRPADCVNALRELTADPLV-----DQVIGAVIVPDQGERKVRDHPDFPAAAARLGS--RLSIHDQP- 248 (657)
T ss_dssp CSCCCEEEECCBSSCHHHHHHHHHHHTTSHHH-----HTTEEEEEEEECSSSCGGGSTTHHHHHHHHGG--GEEEEECC-
T ss_pred CCCCeEEEEEEecCCHHHHHHHHHHHHcCccc-----cCCCCEEEEEECcCCCccchHHHHHHHHhcCC--CEEEEECC-
Confidence 34688999999999999999999999884321 01467999999999984 3333333333444 89999998
Q ss_pred CCCHHHHHHHHHHHc----CCCEEEEEeCCCCCChhhHHHHHHHHHHcCCcccccccceeecC
Q 023346 141 NHGKGEAIRKGMLHS----RGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVTVDS 199 (283)
Q Consensus 141 ~~gk~~a~n~g~~~a----~~d~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (283)
|.|.++|+|.|++.| .+|||+|+|+|+.++|++|+++++.++.+++.+++.+.....+.
T Consensus 249 N~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~ 311 (657)
T 4fix_A 249 NLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQE 311 (657)
T ss_dssp CCHHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTS
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCC
Confidence 999999999999998 46899999999999999999999999998887776666555444
No 11
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.89 E-value=1.5e-22 Score=191.31 Aligned_cols=120 Identities=18% Similarity=0.229 Sum_probs=103.4
Q ss_pred CCceEEEEEeecCCCCChHHHHHHHHHHHHHhhhcCCC-CceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCC-
Q 023346 64 AEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKS-FTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRN- 141 (283)
Q Consensus 64 ~~p~vsviip~~ne~~~l~~~l~s~~~~~~~~~~~~~~-~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~- 141 (283)
..|.||||||+||+++.|.++|+|+.+ |.+ .++|||||||||+|+|.++++++... .+++++..+.+
T Consensus 91 ~~p~vsviIp~~n~~~~l~~~l~sl~~--------q~~~~~~eiivvDd~s~d~t~~~~~~~~~~---~~i~~i~~~~~~ 159 (625)
T 2z86_A 91 IIDGLSIVIPTYNRAKILAITLACLCN--------QKTIYDYEVIVADDGSKENIEEIVREFESL---LNIKYVRQKDYG 159 (625)
T ss_dssp CCCCEEEEEEESSCHHHHHHHHHHHHT--------CCCSSCEEEEEEEESCSSCHHHHHHTTTTT---SCEEEEEECCCS
T ss_pred cCCcEEEEEecCCcHHHHHHHHHHHHh--------hccCCCeEEEEEeCCCchhHHHHHHHhhhc---CCeEEEEeCCCC
Confidence 347899999999999999999999987 533 48999999999999999999887443 26888887743
Q ss_pred CCHHHHHHHHHHHcCCCEEEEEeCCCCCChhhHHHHHHHHHHcCCcccccccc
Q 023346 142 HGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDS 194 (283)
Q Consensus 142 ~gk~~a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 194 (283)
.|++.|+|.|+++++||||+|+|+|+.++|++|+++++.+.+++..+++.+..
T Consensus 160 ~g~~~a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~ 212 (625)
T 2z86_A 160 YQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRK 212 (625)
T ss_dssp CCHHHHHHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEE
T ss_pred cchhHHHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeee
Confidence 46999999999999999999999999999999999999999887766554443
No 12
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.88 E-value=1.7e-23 Score=185.96 Aligned_cols=125 Identities=23% Similarity=0.321 Sum_probs=103.8
Q ss_pred CceEEEEEeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCH
Q 023346 65 EKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGK 144 (283)
Q Consensus 65 ~p~vsviip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~gk 144 (283)
.|+||||||+|||++.|.++|+++.+++. +....+|||||||||+|+|.++++++..+.....++++..+.|.|+
T Consensus 93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~-----~~~~~~EIIVVDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~ 167 (387)
T 3f1y_A 93 GLTVSAVLPSRNVADTVGGIIDEIHALNE-----RAPLIDQILVVDADSEDGTAGVAASHGAEVYSENELMSGYGDAHGK 167 (387)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHHHHHH-----HSCCCSEEEEEECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSH
T ss_pred CCeEEEEEEcCCCHHHHHHHHHHHHHHHh-----cCCCCeEEEEEcCcCCccHHHHHHHhCchhcccceeEecCCccCCH
Confidence 57899999999999999999999987543 3345799999999999999999988743211012223345679999
Q ss_pred HHHHHHHHHHcCCCEEEEEeCCCC-CChhhHHHHHHHHHHcCCcccccccc
Q 023346 145 GEAIRKGMLHSRGELLLMLDADGA-TKVTDLEKLESQIHAVGRKEYNHGDS 194 (283)
Q Consensus 145 ~~a~n~g~~~a~~d~i~~~D~D~~-~~~~~l~~~~~~~~~~~~~~~~~~~~ 194 (283)
+.|+|.|++.|+||||+|+|+|+. ++|++|.++++.+.++++.+++.|..
T Consensus 168 g~A~n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~ 218 (387)
T 3f1y_A 168 GDAMWRALSVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAY 218 (387)
T ss_dssp HHHHHHHTTTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEee
Confidence 999999999999999999999999 89999999999999887777766654
No 13
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.73 E-value=8.4e-18 Score=141.00 Aligned_cols=95 Identities=11% Similarity=0.088 Sum_probs=78.5
Q ss_pred CCceEEEEEeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCC
Q 023346 64 AEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHG 143 (283)
Q Consensus 64 ~~p~vsviip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~g 143 (283)
..+.+||| |+||+++.+++||+|+.+++.. |.+ +|||||||+|+|. .|
T Consensus 14 ~~~~iSII-~~yN~~~~l~~~l~sl~~sl~~----q~~--~EiIVVDn~s~d~-------------------------~g 61 (249)
T 2nxv_A 14 STLMFSVC-SLVRDQAKYDRLLESFERFGFT----PDK--AEFLAADNREGNQ-------------------------FH 61 (249)
T ss_dssp CCCSEEEE-EEESCHHHHHHHHHHHHHTTCC----TTT--EEEEEEECTTSCS-------------------------CC
T ss_pred CcceEEEE-EeeCCHHHHHHHHHHHHHhccC----CCc--EEEEEEECCCCCc-------------------------cc
Confidence 45679975 6799999999999988764332 232 9999999999862 36
Q ss_pred HHHHHHHHHHHcCCCEEEEEeCCCCCChhhHHHHHHHHHHc----CCcccc
Q 023346 144 KGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAV----GRKEYN 190 (283)
Q Consensus 144 k~~a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~~~~~~~~~----~~~~~~ 190 (283)
.+.|+|.|+++|+|||++|+|+|+.++|++|+++++.++++ ++.+++
T Consensus 62 ~a~a~N~Gi~~A~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg~v 112 (249)
T 2nxv_A 62 GFSWHKQMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWLVA 112 (249)
T ss_dssp TTTHHHHHGGGCCSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCeeEE
Confidence 68999999999999999999999999999999999999873 665443
No 14
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=99.69 E-value=2.2e-16 Score=140.10 Aligned_cols=114 Identities=16% Similarity=0.069 Sum_probs=84.2
Q ss_pred EEEEeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcC-C--CcEEEEEcC--C--C
Q 023346 69 SLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYT-V--DNVRIILLG--R--N 141 (283)
Q Consensus 69 sviip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~-~--~~~~~~~~~--~--~ 141 (283)
|+|||.+||+ .|..+++++.... ..+.+|||||||||+|+|.+++++++.+.+ . .++.++... . |
T Consensus 2 slVIiP~~eE-~I~~vl~~l~~~~-------~~~~~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n 73 (397)
T 2bo4_A 2 SLVVFPFKHE-HPEVLLHNVRVAA-------AHPRVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLR 73 (397)
T ss_dssp CEEEEECCSS-CHHHHHHHHHHHH-------HSTTCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSS
T ss_pred cEEEEeCCcc-CHHHHHHHHHHhc-------cCCCeEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCC
Confidence 4444445553 6888888876421 134689999999999999999996655432 1 133333222 3 7
Q ss_pred CCHHHHHHHHH----HHcCCCEEEEEeCCCC-CChhhHHHHHHHHHHcCCcccccc
Q 023346 142 HGKGEAIRKGM----LHSRGELLLMLDADGA-TKVTDLEKLESQIHAVGRKEYNHG 192 (283)
Q Consensus 142 ~gk~~a~n~g~----~~a~~d~i~~~D~D~~-~~~~~l~~~~~~~~~~~~~~~~~~ 192 (283)
.||+.|++.|+ ++++||+++++|||.. .+|+++.++++.+.++ .+++.|
T Consensus 74 ~GkG~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~g--~D~V~g 127 (397)
T 2bo4_A 74 PGKGDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADFG--YGLVRH 127 (397)
T ss_dssp SSHHHHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHTT--CSEEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHcC--CCEEEE
Confidence 99999999999 8999999999999996 8999999999998653 334444
No 15
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.67 E-value=9.9e-17 Score=136.78 Aligned_cols=80 Identities=18% Similarity=0.220 Sum_probs=67.9
Q ss_pred CCceEEEEEeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCC
Q 023346 64 AEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHG 143 (283)
Q Consensus 64 ~~p~vsviip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~g 143 (283)
..|+||||||+||+++.|.++|+|+...+. |.+.++|||||||++ |. ..+
T Consensus 63 ~~~~VSIIIP~yN~~~~L~~~L~sl~~~l~-----q~~~~~EIiVVdds~-d~------------------------~f~ 112 (287)
T 2fy7_A 63 SPHKVAIIIPFRNRQEHLKYWLYYLHPVLQ-----RQQLDYGIYVINQAG-DT------------------------IFN 112 (287)
T ss_dssp CSCEEEEEEEESSCHHHHHHHHHHHHHHHH-----HTTCEEEEEEEEECS-SS------------------------CCC
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHHHH-----HhcCCceEEEEEeCC-CC------------------------ccc
Confidence 468899999999999999999999984332 456789999999943 31 236
Q ss_pred HHHHHHHHH----HHcCCCEEEEEeCCCCCChhh
Q 023346 144 KGEAIRKGM----LHSRGELLLMLDADGATKVTD 173 (283)
Q Consensus 144 k~~a~n~g~----~~a~~d~i~~~D~D~~~~~~~ 173 (283)
++.++|.|+ +.|+||||+|+|+|+.+.+++
T Consensus 113 ~a~a~N~G~~~al~~A~gd~i~flD~D~i~~~d~ 146 (287)
T 2fy7_A 113 RAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDH 146 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEEECTTEEESBTT
T ss_pred hhhhhhhHHHHHHHhCCCCEEEEECCCcccCCCc
Confidence 889999999 899999999999999999995
No 16
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=99.62 E-value=2e-15 Score=128.71 Aligned_cols=99 Identities=16% Similarity=0.177 Sum_probs=79.2
Q ss_pred CceEEEEEeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcch---HHHHHHHHHH-cCCCcEEEEEcCC
Q 023346 65 EKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGT---KRVAFDFVRK-YTVDNVRIILLGR 140 (283)
Q Consensus 65 ~p~vsviip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t---~~~~~~~~~~-~~~~~~~~~~~~~ 140 (283)
..++|||||+|||+. .+|+++++ |.+.++|||+|||||+|.| .++++++.+. .. ++.+++..
T Consensus 52 ~~klSIVVPvYNEe~---~lLesVl~--------qi~~d~eIIlVdDGS~D~s~~e~dil~~~~~~~~~--ri~viHQk- 117 (391)
T 2wvl_A 52 LEQTAIVVPTRNERL---KLLEGVLS--------GIPHEALILVASNSSPDRFQMERDLLEEFAHLTER--PALIFHQK- 117 (391)
T ss_dssp HTTEEEEEEESSCCH---HHHHHHHH--------TSCTTSEEEEEECCCHHHHHHHHHHHHHHHHHTTC--CEEEEETT-
T ss_pred HhceEEEEeccCcHH---HHHHHHHh--------cCCCCceEEEEECCCCCChHhHHHHHHHHHhhccc--ceEEEecc-
Confidence 456999999999996 57999998 6777999999999999999 5788898874 44 78888753
Q ss_pred CCCHHHHH-----------------------HHHHHHc---CCCEEEEEeCCCCCChhhHHHH
Q 023346 141 NHGKGEAI-----------------------RKGMLHS---RGELLLMLDADGATKVTDLEKL 177 (283)
Q Consensus 141 ~~gk~~a~-----------------------n~g~~~a---~~d~i~~~D~D~~~~~~~l~~~ 177 (283)
|.|.+.|+ -.|+..| .++||.|+|+|+.++.+..+.+
T Consensus 118 n~gls~Ar~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Eyv 180 (391)
T 2wvl_A 118 DPALAEALRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEYV 180 (391)
T ss_dssp CHHHHHHHHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHHH
T ss_pred ChHHHHHHHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHHH
Confidence 55555555 4578777 7999999999999976665544
No 17
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=99.53 E-value=5.3e-14 Score=123.16 Aligned_cols=104 Identities=20% Similarity=0.329 Sum_probs=81.7
Q ss_pred eEEEEEeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcch------HHHHHHHHHHcCCCcEEEEEcCC
Q 023346 67 YISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGT------KRVAFDFVRKYTVDNVRIILLGR 140 (283)
Q Consensus 67 ~vsviip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t------~~~~~~~~~~~~~~~~~~~~~~~ 140 (283)
++|||||+|||+.. .+..+++++ ...+|||||||||+|+| .++++++....+ ....++....
T Consensus 52 ~iSVVIP~yNEE~~---lI~~vL~~i--------~~~~eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~~-~~~~Vl~~~~ 119 (394)
T 2zu9_A 52 KMAVIVPMKNEKLH---LVDGVLKAI--------PHKCPIIIVSNSKREGPNRYKLEVDLIRHFYNLTH-SKIIMIHQKD 119 (394)
T ss_dssp TEEEEEEESSCCHH---HHHHHHHHS--------CTTSCEEEEECCCCSSSCHHHHHHHHHHHHHHHHC-CCEEEEETTC
T ss_pred CEEEEEecCcccHH---HHHHHHHcC--------CCCcEEEEEECcCcccccchhhHHHHHHHHhhccc-cceEEEecCC
Confidence 59999999999953 366666522 23689999999997777 677877766544 3566666543
Q ss_pred ----------------------CCCHHHHHHHHHHHc---CCCEEEEEeCCCCCChhhHHHHHHHHHH
Q 023346 141 ----------------------NHGKGEAIRKGMLHS---RGELLLMLDADGATKVTDLEKLESQIHA 183 (283)
Q Consensus 141 ----------------------~~gk~~a~n~g~~~a---~~d~i~~~D~D~~~~~~~l~~~~~~~~~ 183 (283)
+.||+.|+-.|+.+| +||+|+++|+|. ..|..+.++++.+..
T Consensus 120 p~v~~~~~~~g~~~il~~~~~~r~GKG~Am~aGl~~A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy~a 186 (394)
T 2zu9_A 120 PGLAKAFKEVGYTDILDENGMIRSGKGEGMLVGLLLAKAIGAEYVGFVDADN-YIPGAVNEYVKDYAA 186 (394)
T ss_dssp HHHHHHHHHHTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCB-SCHHHHHHHHHHHHH
T ss_pred cchhHHhhhccccccccccccccCChHHHHHHHHHHHhhCCCCEEEEEeCCC-CCHHHHHHHHHHhhh
Confidence 259999999999999 999999999999 678888888877664
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=99.18 E-value=3.1e-11 Score=104.79 Aligned_cols=110 Identities=14% Similarity=0.113 Sum_probs=82.7
Q ss_pred eEEEEEeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEE---------
Q 023346 67 YISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIIL--------- 137 (283)
Q Consensus 67 ~vsviip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~--------- 137 (283)
.++|+|++||+.+ +.++|++++++. ....+.+|||.|||+.++|.++++++.. .+..+.
T Consensus 3 ~~pViI~~yNRp~-l~~~L~sL~~~~------p~~~~~~iivsdDgs~~~~~~vi~~~~~-----~I~~~~~~d~~~~~~ 70 (343)
T 1fo8_A 3 VIPILVIACDRST-VRRCLDKLLHYR------PSAELFPIIVSQDCGHEETAQVIASYGS-----AVTHIRQPDLSNIAV 70 (343)
T ss_dssp CCCEEEEESSCTT-HHHHHHHHHHHC------SCTTTSCEEEEECTTCHHHHHHHHTTGG-----GSEEEECSCCCCCCC
T ss_pred cccEEEEECCcHH-HHHHHHHHHhcC------CCcCCcEEEEEECCCCHHHHHHHHHcCC-----ceEEEEcCCcccccc
Confidence 4789999999998 999999999821 1244689999999999999999887642 233322
Q ss_pred cCCCCCHH----------HHHHHHHHHcCCCEEEEEeCCCCCChhhHHHHHHHH---HHcCCcc
Q 023346 138 LGRNHGKG----------EAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQI---HAVGRKE 188 (283)
Q Consensus 138 ~~~~~gk~----------~a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~~~~~~---~~~~~~~ 188 (283)
.++|.|.. .++|.++..+++++++++|+|+.+.|++++-+.+.+ +.++...
T Consensus 71 ~~~N~g~~~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~ 134 (343)
T 1fo8_A 71 QPDHRKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLW 134 (343)
T ss_dssp CTTCGGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEE
T ss_pred chhhcCcccchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEE
Confidence 23455532 577777777799999999999999999986666655 4444443
No 19
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=96.91 E-value=0.0031 Score=52.30 Aligned_cols=78 Identities=12% Similarity=0.208 Sum_probs=62.5
Q ss_pred CCCceEEEEEeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCCC
Q 023346 63 PAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNH 142 (283)
Q Consensus 63 ~~~p~vsviip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (283)
.+.-+|+||||-+|+++.|...|..+...+..| ...+.|+||+... ....
T Consensus 48 ~~~~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ-----~l~y~I~VieQ~~-------------------------~~~F 97 (287)
T 3lw6_A 48 ASVHKMALLVPFRDRFEELLQFVPHMTAFLKRQ-----GVAHHIFVLNQVD-------------------------RFRF 97 (287)
T ss_dssp CCCCEEEEEEEESSCHHHHHHHHHHHHHHHHHT-----TCEEEEEEEEECS-------------------------SSCC
T ss_pred CCcceEEEEEEeCCHHHHHHHHHHHHHHHHHHc-----CCceEEEEEecCC-------------------------CCcc
Confidence 345679999999999999888888887776653 4468888887521 1357
Q ss_pred CHHHHHHHHHHHcC--CCEEEEEeCCCCCC
Q 023346 143 GKGEAIRKGMLHSR--GELLLMLDADGATK 170 (283)
Q Consensus 143 gk~~a~n~g~~~a~--~d~i~~~D~D~~~~ 170 (283)
+++..+|.|+..|. .|+++|-|.|..+.
T Consensus 98 NRa~LlNvGf~ea~~~~d~~ifHDVDLlP~ 127 (287)
T 3lw6_A 98 NRASLINVGFQFASDVYDYIAMHDVDLLPL 127 (287)
T ss_dssp CHHHHHHHHHHHSCTTCCEEEEECTTEEEC
T ss_pred chhheecccHHHHhccCCEEEEeccccccc
Confidence 89999999999885 69999999999885
No 20
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=96.76 E-value=0.011 Score=48.81 Aligned_cols=102 Identities=13% Similarity=0.082 Sum_probs=66.2
Q ss_pred CCCCceEEEEEeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCC--CcchHHHHHHHHHHcCCCcEEEEEc-
Q 023346 62 DPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGS--SDGTKRVAFDFVRKYTVDNVRIILL- 138 (283)
Q Consensus 62 ~~~~p~vsviip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s--~d~t~~~~~~~~~~~~~~~~~~~~~- 138 (283)
....|.|-||.|+|.+.....+ |..+...+.. -+++.-|||+|+. ++.+.+++++- ++.+.+.
T Consensus 17 ~~~~p~IivVTPTy~R~~Q~a~-LtRLa~TL~~------Vp~L~WIVVEd~~~~t~~va~lL~rs-------Gl~y~HL~ 82 (281)
T 3cu0_A 17 RGSHMTIYVVTPTYARLVQKAE-LVRLSQTLSL------VPRLHWLLVEDAEGPTPLVSGLLAAS-------GLLFTHLV 82 (281)
T ss_dssp ----CEEEEEEEECCSTTHHHH-HHHHHHHHTT------SSSEEEEEEESSSSCCHHHHHHHHHH-------CSEEEEEE
T ss_pred CCCCCeEEEEeCCCCCcchhHH-HHHHHHHHhc------CCceEEEEEcCCCCCCHHHHHHHHHc-------CCceEEec
Confidence 3467889999999998665443 4555544432 2389999999963 56677777765 2333322
Q ss_pred -CCCCC--------------HHHHHHHHHHHcC-----------------CCEEEEEeCCCCCChhhHHHH
Q 023346 139 -GRNHG--------------KGEAIRKGMLHSR-----------------GELLLMLDADGATKVTDLEKL 177 (283)
Q Consensus 139 -~~~~g--------------k~~a~n~g~~~a~-----------------~d~i~~~D~D~~~~~~~l~~~ 177 (283)
+.+.+ -...+|.|++..+ .-+|.|.|+|...+-..+++|
T Consensus 83 ~~~p~~~~~~~~dp~w~~~rg~~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl~LFdem 153 (281)
T 3cu0_A 83 VLTPKAQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEM 153 (281)
T ss_dssp CCCC-----------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHH
T ss_pred cCCCccccccccccccccchhHHHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccHHHHHHh
Confidence 21111 1467999998776 247899999999988887774
No 21
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=96.69 E-value=0.011 Score=48.22 Aligned_cols=100 Identities=16% Similarity=0.178 Sum_probs=68.0
Q ss_pred CceEEEEEeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCC--CcchHHHHHHHHHHcCCCcEEEEEc--CC
Q 023346 65 EKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGS--SDGTKRVAFDFVRKYTVDNVRIILL--GR 140 (283)
Q Consensus 65 ~p~vsviip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s--~d~t~~~~~~~~~~~~~~~~~~~~~--~~ 140 (283)
.|.|-||.|+|.+.....+ |..+...+.. -+++.-|||+|+. ++.+.+++++- ++.+.+. +.
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~-LtRLa~TL~~------Vp~L~WIVVEd~~~~t~~va~lL~~s-------gl~y~HL~~~~ 67 (253)
T 1v84_A 2 LPTIHVVTPTYSRPVQKAE-LTRMANTLLH------VPNLHWLVVEDAPRRTPLTARLLRDT-------GLNYTHLHVET 67 (253)
T ss_dssp CCEEEEEEEECCSTTHHHH-HHHHHHHHTT------SSSEEEEEEESSSSCCHHHHHHHHHH-------CCEEEEEECCC
T ss_pred CCEEEEEeCCCCccchhHH-HHHHhhhhcc------CCceEEEEEeCCCCCCHHHHHHHHHc-------CCceEEeecCC
Confidence 4779999999998655443 5555554432 3489999999964 57777887765 3333332 11
Q ss_pred --C------------CCHHHHHHHHHHHcC---------CCEEEEEeCCCCCChhhHHHHH
Q 023346 141 --N------------HGKGEAIRKGMLHSR---------GELLLMLDADGATKVTDLEKLE 178 (283)
Q Consensus 141 --~------------~gk~~a~n~g~~~a~---------~d~i~~~D~D~~~~~~~l~~~~ 178 (283)
+ ..-...+|.|++..+ .-+|.|.|+|...+-+.+++|-
T Consensus 68 p~~~~~~~~~~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~emR 128 (253)
T 1v84_A 68 PRNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMR 128 (253)
T ss_dssp CHHHHCC-------CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHHHH
T ss_pred CccccccccccCccccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHHHh
Confidence 0 012467899997754 3588999999999988887753
No 22
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=96.18 E-value=0.064 Score=44.51 Aligned_cols=105 Identities=12% Similarity=0.211 Sum_probs=63.6
Q ss_pred CceEEEEEeecCCCCChH----------HHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEE
Q 023346 65 EKYISLIIPAFNEEHRLP----------GALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVR 134 (283)
Q Consensus 65 ~p~vsviip~~ne~~~l~----------~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~ 134 (283)
.+++.+|||+......++ -.|+..++.+.. .. --+|+|+-| ++. ++++..++ +++
T Consensus 16 ~M~~~aIIlA~G~stRlp~K~L~~i~GkPmi~~~l~~l~~-----~~-i~~IvV~t~--~~~----i~~~~~~~---g~~ 80 (264)
T 3k8d_A 16 HMSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARE-----SG-AERIIVATD--HED----VARAVEAA---GGE 80 (264)
T ss_dssp --CCEEEEECCSCCSSSTTGGGCEETTEEHHHHHHHHHHH-----TT-CSEEEEEES--CHH----HHHHHHHT---TCE
T ss_pred CCceEEEEEcCCCCCCCCCcceeeECCeEHHHHHHHHHHh-----CC-CCEEEEECC--HHH----HHHHHHHc---CCE
Confidence 345788888887776665 134444444332 12 357888764 222 23333333 355
Q ss_pred EEE--cCCCCCHHHHHHHHHHHc---CCCEEEEEeCCCC-CChhhHHHHHHHHHHcC
Q 023346 135 IIL--LGRNHGKGEAIRKGMLHS---RGELLLMLDADGA-TKVTDLEKLESQIHAVG 185 (283)
Q Consensus 135 ~~~--~~~~~gk~~a~n~g~~~a---~~d~i~~~D~D~~-~~~~~l~~~~~~~~~~~ 185 (283)
++. .....|.+. +..+++.. ..|+++++++|.. +.++.++++++.+.+..
T Consensus 81 v~~~~~~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~ 136 (264)
T 3k8d_A 81 VCMTRADHQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQ 136 (264)
T ss_dssp EEECCTTCCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSS
T ss_pred EEEecCCCCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcC
Confidence 554 333455554 55555554 5799999999994 58999999999997543
No 23
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=96.17 E-value=0.11 Score=42.51 Aligned_cols=72 Identities=10% Similarity=0.186 Sum_probs=46.7
Q ss_pred eEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEE--cCCCCCHHHHHHHHHHHc---CCCEEEEEeCCC-CCChhhHHHH
Q 023346 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIIL--LGRNHGKGEAIRKGMLHS---RGELLLMLDADG-ATKVTDLEKL 177 (283)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~--~~~~~gk~~a~n~g~~~a---~~d~i~~~D~D~-~~~~~~l~~~ 177 (283)
-+|+|+-+ ++. ++++..++ +++++. .+...|.+. ...+++.. ..|.++++++|. .+.++.++++
T Consensus 43 ~~ivVv~~--~~~----i~~~~~~~---g~~v~~~~~~~~~Gt~~-~~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l 112 (252)
T 3oam_A 43 DRVIIATD--DER----VEQAVQAF---GGVVCMTSPNHQSGTER-LAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQV 112 (252)
T ss_dssp SEEEEEES--CHH----HHHHHHHT---TCEEEECCTTCCSHHHH-HHHHHHHTTCCTTSEEEECCTTCTTCCHHHHHHH
T ss_pred CeEEEECC--HHH----HHHHHHHc---CCEEEEcCCCCCCcHHH-HHHHHHhcCcCCCCEEEEEeCCeeecCHHHHHHH
Confidence 47888764 222 33333333 355543 333466665 34455554 579999999999 5689999999
Q ss_pred HHHHHHcC
Q 023346 178 ESQIHAVG 185 (283)
Q Consensus 178 ~~~~~~~~ 185 (283)
++.+.+..
T Consensus 113 ~~~~~~~~ 120 (252)
T 3oam_A 113 ADNLAACS 120 (252)
T ss_dssp HHHHHHSS
T ss_pred HHHHHhcC
Confidence 99997753
No 24
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=96.02 E-value=0.029 Score=45.63 Aligned_cols=101 Identities=15% Similarity=0.175 Sum_probs=63.8
Q ss_pred CceEEEEEeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCC--cchHHHHHHHHHHcCCCcEEEEEcC--C
Q 023346 65 EKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSS--DGTKRVAFDFVRKYTVDNVRIILLG--R 140 (283)
Q Consensus 65 ~p~vsviip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~--d~t~~~~~~~~~~~~~~~~~~~~~~--~ 140 (283)
.|.|-||.|+|.+.....+ |..+...+.. -+++.-|||+|+.. +.+.+++++-.- ..+.+..+ .
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~-LtRLa~TL~~------Vp~l~WIVVEd~~~~~~~v~~lL~~sgl-----~y~HL~~~~~~ 69 (246)
T 2d0j_A 2 LPTIYAITPTYSRPVQKAE-LTRLANTFRQ------VAQLHWILVEDAAARSELVSRFLARAGL-----PSTHLHVPTPR 69 (246)
T ss_dssp CCCEEEEEEECCSTTHHHH-HHHHHHHHTT------STTEEEEEEESSSSCCHHHHHHHHHSCS-----CEEEEECCCCC
T ss_pred CCEEEEEeCCCCccchhHH-HHHHHHHHhc------CCceEEEEEcCCCCCCHHHHHHHHHcCC-----ceEEEecCCcc
Confidence 4678999999998655443 5555554432 23589999999753 234555554311 22222222 1
Q ss_pred CC------CHHHHHHHHHHHcC---------CCEEEEEeCCCCCChhhHHHH
Q 023346 141 NH------GKGEAIRKGMLHSR---------GELLLMLDADGATKVTDLEKL 177 (283)
Q Consensus 141 ~~------gk~~a~n~g~~~a~---------~d~i~~~D~D~~~~~~~l~~~ 177 (283)
+. .-...+|.|++..+ .-+|.|.|+|...+-+.++++
T Consensus 70 ~~~~~~~prg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l~LF~em 121 (246)
T 2d0j_A 70 RYKRPGLPRATEQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQEM 121 (246)
T ss_dssp C----CCCCCHHHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECTHHHHHH
T ss_pred ccCCCCCcchHHHHHHHHHHHHHhcccccCccceEEEccCCCcccHHHHHHH
Confidence 11 12378899997642 368899999999998888774
No 25
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=95.87 E-value=0.13 Score=42.33 Aligned_cols=104 Identities=17% Similarity=0.267 Sum_probs=60.0
Q ss_pred eEEEEEeecCCCCChH----------HHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEE
Q 023346 67 YISLIIPAFNEEHRLP----------GALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRII 136 (283)
Q Consensus 67 ~vsviip~~ne~~~l~----------~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~ 136 (283)
++.+|||+......++ -.|+.+++.+.. . .--+|+|+-| ++. ++++..++ +++++
T Consensus 9 ~~~aIIlA~G~stRl~~K~L~~i~GkPli~~~l~~l~~-----~-~i~~VvVvt~--~~~----i~~~~~~~---g~~v~ 73 (256)
T 3tqd_A 9 EFRVIIPARFDSTRLPGKALVDIAGKPMIQHVYESAIK-----S-GAEEVVIATD--DKR----IRQVAEDF---GAVVC 73 (256)
T ss_dssp CCEEEEECCCC---CTTGGGCEETTEEHHHHHHHHHHH-----T-TCSEEEEEES--CHH----HHHHHHHT---TCEEE
T ss_pred CceEEEEcCCCCCCCCCCCeeeECCchHHHHHHHHHHh-----C-CCCEEEEECC--HHH----HHHHHHHc---CCeEE
Confidence 4666677666554332 133444443332 1 1347887764 222 33333333 35554
Q ss_pred Ec--CCCCCHHHHHHHHHHHc---CCCEEEEEeCCC-CCChhhHHHHHHHHHHcCC
Q 023346 137 LL--GRNHGKGEAIRKGMLHS---RGELLLMLDADG-ATKVTDLEKLESQIHAVGR 186 (283)
Q Consensus 137 ~~--~~~~gk~~a~n~g~~~a---~~d~i~~~D~D~-~~~~~~l~~~~~~~~~~~~ 186 (283)
.. +...|.+. +..|++.. ..|+++++++|. .++++.++++++.+.++++
T Consensus 74 ~~~~~~~~Gt~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~ 128 (256)
T 3tqd_A 74 MTSSDHQSGTER-IAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDN 128 (256)
T ss_dssp ECCTTCCSHHHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC-
T ss_pred EeCCCCCCcHHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCC
Confidence 42 33456554 56677765 579999999999 5589999999999987544
No 26
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=95.82 E-value=0.17 Score=40.66 Aligned_cols=74 Identities=16% Similarity=0.182 Sum_probs=49.3
Q ss_pred eEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcC-----CCCCHHHHHHHHHHHc-CCCEEEEEeCCCCC-ChhhHHH
Q 023346 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG-----RNHGKGEAIRKGMLHS-RGELLLMLDADGAT-KVTDLEK 176 (283)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~-----~~~gk~~a~n~g~~~a-~~d~i~~~D~D~~~-~~~~l~~ 176 (283)
-+|+|+-+ .+.. +++..++ ++.++..+ ...|...++..|++.. ..|+++++++|..+ +++.+++
T Consensus 45 ~~ivv~~~--~~~i----~~~~~~~---g~~~~~~~~~~~~~~~~~~~~v~~al~~~~~~d~vlv~~~D~Pli~~~~i~~ 115 (229)
T 1qwj_A 45 QSVWVSTD--HDEI----ENVAKQF---GAQVHRRSSETSKDSSTSLDAIVEFLNYHNEVDIVGNIQATSPCLHPTDLQK 115 (229)
T ss_dssp SEEEEEES--CHHH----HHHHHHT---TCEEEECCGGGSSTTCCHHHHHHHHHTTCTTCSEEEEECTTCTTCCHHHHHH
T ss_pred CEEEEECC--hHHH----HHHHHHc---CCEEEeChhhhcCCCCcHHHHHHHHHHhcCCCCEEEEecCCCCcCCHHHHHH
Confidence 47777764 2222 2333333 35666554 2345556777888876 57999999999864 8999999
Q ss_pred HHHHHHHcCC
Q 023346 177 LESQIHAVGR 186 (283)
Q Consensus 177 ~~~~~~~~~~ 186 (283)
+++.+.+.+.
T Consensus 116 l~~~~~~~~~ 125 (229)
T 1qwj_A 116 VAEMIREEGY 125 (229)
T ss_dssp HHHHHHSSCC
T ss_pred HHHHHHhCCC
Confidence 9998876543
No 27
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=95.17 E-value=0.42 Score=38.56 Aligned_cols=71 Identities=17% Similarity=0.259 Sum_probs=47.6
Q ss_pred eEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcC--CCCCHHHHHHHHHHHcCCCEEEEEeCCCC-CChhhHHHHHHH
Q 023346 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG--RNHGKGEAIRKGMLHSRGELLLMLDADGA-TKVTDLEKLESQ 180 (283)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~--~~~gk~~a~n~g~~~a~~d~i~~~D~D~~-~~~~~l~~~~~~ 180 (283)
-+|+|+-+. +. +.++..++ +++++..+ ...|.+.+. .|++....+.++++++|.. +.++.++++++.
T Consensus 44 ~~ivvv~~~--~~----i~~~~~~~---~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~ 113 (245)
T 1h7e_A 44 AEVWVATDD--PR----VEQAVQAF---GGKAIMTRNDHESGTDRLV-EVMHKVEADIYINLQGDEPMIRPRDVETLLQG 113 (245)
T ss_dssp CEEEEEESC--HH----HHHHHHHT---TCEEEECCSCCSSHHHHHH-HHHHHSCCSEEEECCTTCTTCCHHHHHHHHHH
T ss_pred CeEEEECCc--HH----HHHHHHHc---CCeEEeCCCccCCcHHHHH-HHHHhCCCCEEEEEcCCcCcCCHHHHHHHHHH
Confidence 478887652 22 23333333 46677653 234555544 5666667899999999996 489999999998
Q ss_pred HHHc
Q 023346 181 IHAV 184 (283)
Q Consensus 181 ~~~~ 184 (283)
+.+.
T Consensus 114 ~~~~ 117 (245)
T 1h7e_A 114 MRDD 117 (245)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 8776
No 28
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=95.08 E-value=0.018 Score=48.23 Aligned_cols=117 Identities=14% Similarity=0.018 Sum_probs=73.7
Q ss_pred CCCceEEEEEeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchH-HHHHHHHHHcCCCcEEEEEcCCC
Q 023346 63 PAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTK-RVAFDFVRKYTVDNVRIILLGRN 141 (283)
Q Consensus 63 ~~~p~vsviip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~-~~~~~~~~~~~~~~~~~~~~~~~ 141 (283)
.+...+||+|-+|++.+.|.+.|+.+. ....--||+||=++...... .....+.. . ...++++..+.|
T Consensus 25 ~~~~~FTvvi~ty~R~~~L~~lv~~~~---------~~~~v~~IvVvWn~~~~~pp~~~~~~~~~-~-~vpv~v~~~~~n 93 (293)
T 1omz_A 25 SALDSFTLIMQTYNRTDLLLRLLNHYQ---------AVPSLHKVIVVWNNVGEKGPEELWNSLGP-H-PIPVIFKPQTAN 93 (293)
T ss_dssp -CTTCEEEEEEESSCHHHHHHHHHHHT---------TSTTEEEEEEEECCTTCCCTHHHHHHTCC-C-SSCEEEEECSSC
T ss_pred CCCCceEEEEEeecccHHHHHHHHHHh---------cCCCCCeEEEEeCCCCCCCChhhccccCC-C-CccEEEEeCCCC
Confidence 344569999999997544444433322 23345688888776543333 22322211 0 135888877654
Q ss_pred CCHHHHHHHHHHHcCCCEEEEEeCCCCCChhhHHHHHHHHHHcCCcccccc
Q 023346 142 HGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHG 192 (283)
Q Consensus 142 ~gk~~a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~ 192 (283)
. -.++=.-....+++-|+.+|+|..+..+.|+...+.-++.|+..+++.
T Consensus 94 s--LnnRF~p~~~i~T~AVLslDDDv~l~~~el~faF~vWr~~PdRlVGf~ 142 (293)
T 1omz_A 94 K--MRNRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQIIGFV 142 (293)
T ss_dssp C--GGGGGSCCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTSTTSEEESC
T ss_pred c--hhhccCCCccCCcCEEEEEcCCCCCCHHHHHHHHHHHHHCccceecCc
Confidence 2 111112234568999999999999999999999999999888765444
No 29
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=94.72 E-value=0.16 Score=40.77 Aligned_cols=72 Identities=8% Similarity=0.125 Sum_probs=47.0
Q ss_pred eEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcC-----CCCCHHHHHHHHHHHcC--CCEEEEEeCCCC-CChhhHH
Q 023346 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG-----RNHGKGEAIRKGMLHSR--GELLLMLDADGA-TKVTDLE 175 (283)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~-----~~~gk~~a~n~g~~~a~--~d~i~~~D~D~~-~~~~~l~ 175 (283)
-+|+|+-+. +.. +++..++ ++.++..+ ...|...++..|++... .|.++++++|.. +.++.++
T Consensus 46 ~~ivvv~~~--~~i----~~~~~~~---~~~~~~~~~~~~~~~~g~~~sv~~~l~~~~~~~d~vlv~~~D~P~~~~~~i~ 116 (228)
T 1ezi_A 46 DRIIVSTDG--GLI----AEEAKNF---GVEVVLRPAELASDTASSISGVIHALETIGSNSGTVTLLQPTSPLRTGAHIR 116 (228)
T ss_dssp SEEEEEESC--HHH----HHHHHHT---TCEEEECCC------CHHHHHHHHHHHHHTCCSEEEEECCTTCTTCCHHHHH
T ss_pred CEEEEECCC--HHH----HHHHHHc---CCEEEeCchHHcCCCCChHHHHHHHHHHhCCCCCEEEEEcCCCCcCCHHHHH
Confidence 478887752 222 2333333 35555544 23456778888888763 589999999985 5889999
Q ss_pred HHHHHHHHc
Q 023346 176 KLESQIHAV 184 (283)
Q Consensus 176 ~~~~~~~~~ 184 (283)
++++.+.+.
T Consensus 117 ~l~~~~~~~ 125 (228)
T 1ezi_A 117 EAFSLFDEK 125 (228)
T ss_dssp HHHTTCCTT
T ss_pred HHHHHHHhc
Confidence 998876543
No 30
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=94.35 E-value=0.85 Score=37.36 Aligned_cols=74 Identities=8% Similarity=0.161 Sum_probs=47.7
Q ss_pred ceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEE-cC-CCCCHHHHHHHHHHHc---CCCEEEEEeCCC-CCChhhHHH
Q 023346 103 TYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIIL-LG-RNHGKGEAIRKGMLHS---RGELLLMLDADG-ATKVTDLEK 176 (283)
Q Consensus 103 ~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~-~~-~~~gk~~a~n~g~~~a---~~d~i~~~D~D~-~~~~~~l~~ 176 (283)
--+|+|+-|. +. +.++..++ +++++. .+ ...|. .++..|++.. ..|+++++++|. .++++.+++
T Consensus 42 ~~~vvVvt~~--~~----i~~~~~~~---g~~v~~~~~~~~~Gt-~~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~ 111 (253)
T 4fcu_A 42 FDDLCVATDD--ER----IAEICRAE---GVDVVLTSADHPSGT-DRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQ 111 (253)
T ss_dssp CCEEEEEESC--HH----HHHHHHTT---TCCEEECCTTCCCHH-HHHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHH
T ss_pred CCEEEEECCH--HH----HHHHHHHc---CCeEEEeCCCCCChH-HHHHHHHHhcCcCCCCEEEEEeCCcccCCHHHHHH
Confidence 4578887652 22 23333333 344443 22 23444 3566677665 359999999999 558999999
Q ss_pred HHHHHHHcCC
Q 023346 177 LESQIHAVGR 186 (283)
Q Consensus 177 ~~~~~~~~~~ 186 (283)
+++.+.+.+.
T Consensus 112 li~~~~~~~~ 121 (253)
T 4fcu_A 112 VAKLLVDKPN 121 (253)
T ss_dssp HHHHHHHCTT
T ss_pred HHHHHHhCCC
Confidence 9999987653
No 31
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=93.97 E-value=1.1 Score=35.55 Aligned_cols=75 Identities=12% Similarity=0.085 Sum_probs=49.6
Q ss_pred eEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHHc-------CCCEEEEEeCCCC-CChhhHH
Q 023346 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHS-------RGELLLMLDADGA-TKVTDLE 175 (283)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~gk~~a~n~g~~~a-------~~d~i~~~D~D~~-~~~~~l~ 175 (283)
-+|+||-+...+...+ +.+ +....+.++ ....|...++-.|++.. ..+.++++++|.. ++++.++
T Consensus 51 ~~ivvv~~~~~~~~~~-~~~----~~~~~i~~~--~~~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~ 123 (231)
T 1vgw_A 51 DLTVVVVSPEDTFADK-VQT----AFPQVRVWK--NGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALA 123 (231)
T ss_dssp CEEEEECCTTCSTHHH-HHH----HCTTSEEEC--CCCSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHH
T ss_pred CeEEEEECccHHHHHH-HHh----cCCCceEEE--cCCCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHH
Confidence 4777776543333333 322 211246554 33568888888888765 4699999999985 5889999
Q ss_pred HHHHHHHHcC
Q 023346 176 KLESQIHAVG 185 (283)
Q Consensus 176 ~~~~~~~~~~ 185 (283)
++++.+.+.+
T Consensus 124 ~l~~~~~~~~ 133 (231)
T 1vgw_A 124 RLIEQAGNAA 133 (231)
T ss_dssp HHHHHHTTCT
T ss_pred HHHHHHhhcC
Confidence 9999876543
No 32
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=93.68 E-value=0.13 Score=40.08 Aligned_cols=87 Identities=10% Similarity=0.160 Sum_probs=54.4
Q ss_pred CCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcC-CCCCHHHHHHHHHHHc
Q 023346 77 EEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG-RNHGKGEAIRKGMLHS 155 (283)
Q Consensus 77 e~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~-~~~gk~~a~n~g~~~a 155 (283)
....+..+++.+.+ ..--+|+||-+... +.++++.... +++++..+ ...|...++..|++..
T Consensus 30 g~pll~~~l~~l~~----------~~~~~i~vv~~~~~----~~~~~~~~~~---~~~~~~~~~~~~g~~~~i~~al~~~ 92 (197)
T 2wee_A 30 DTTVLGATLDVARQ----------AGFDQLILTLGGAA----SAVRAAMALD---GTDVVVVEDVERGCAASLRVALARV 92 (197)
T ss_dssp TEEHHHHHHHHHHH----------TTCSEEEEEECTTH----HHHHHHSCCT---TSEEEECC----CCHHHHHHHHTTS
T ss_pred CccHHHHHHHHHHh----------cCCCcEEEEeCCCH----HHHHHHhccC---CCEEEECCCcccCHHHHHHHHHHHh
Confidence 34455555555544 11247777764321 2233332222 46666654 2357888999999887
Q ss_pred --CCCEEEEEeCCC-CCChhhHHHHHHH
Q 023346 156 --RGELLLMLDADG-ATKVTDLEKLESQ 180 (283)
Q Consensus 156 --~~d~i~~~D~D~-~~~~~~l~~~~~~ 180 (283)
..+.++++++|. .++++.++++++.
T Consensus 93 ~~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 93 HPRATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp CTTEEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred cccCCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 468999999999 4689999999987
No 33
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=93.53 E-value=0.78 Score=36.62 Aligned_cols=44 Identities=9% Similarity=0.096 Sum_probs=35.5
Q ss_pred CCCHHHHHHHHHHHcCCCEEEEEeCCC-CCChhhHHHHHHHHHHcC
Q 023346 141 NHGKGEAIRKGMLHSRGELLLMLDADG-ATKVTDLEKLESQIHAVG 185 (283)
Q Consensus 141 ~~gk~~a~n~g~~~a~~d~i~~~D~D~-~~~~~~l~~~~~~~~~~~ 185 (283)
..|.+.+. .|++....|+++++++|. .+++..++++++.+.+.+
T Consensus 71 ~~g~~~~~-~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~ 115 (234)
T 2y6p_A 71 PSGSDRVL-YVVRDLDVDLIINYQGDEPFVYEEDIKLIFRELEKGE 115 (234)
T ss_dssp CSHHHHHH-HHHTTCCCSEEEECCTTCCCCCHHHHHHHHHHHHHTC
T ss_pred ccchHHHH-HHHHhCCCCEEEEecCCcCcCCHHHHHHHHHHHHhCC
Confidence 45666666 477777789999999999 778899999999887654
No 34
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=93.48 E-value=0.21 Score=38.88 Aligned_cols=70 Identities=11% Similarity=0.226 Sum_probs=47.8
Q ss_pred eEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcC-CCCCHHHHHHHHHHHc--CCCEEEEEeCCCCC-ChhhHHHHHH
Q 023346 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG-RNHGKGEAIRKGMLHS--RGELLLMLDADGAT-KVTDLEKLES 179 (283)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~-~~~gk~~a~n~g~~~a--~~d~i~~~D~D~~~-~~~~l~~~~~ 179 (283)
-+|+|+.+... +.++++...+ +++++..+ ...|...++..|++.. ..++++++++|..+ +++.++++++
T Consensus 47 ~~i~vv~~~~~----~~~~~~~~~~---~~~~~~~~~~~~g~~~~i~~al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~ 119 (199)
T 2waw_A 47 DQLIVTLGGAA----DEVLEKVELD---GLDIVLVDDAGLGCSSSLKSALTWVDPTAEGIVLMLGDQPGITASAVASLIA 119 (199)
T ss_dssp SEEEEEECTTH----HHHHHHSCCT---TSEEEECCCCCTTCCCHHHHHHHTSCTTCSEEEEEETTCTTCCHHHHHHHHH
T ss_pred CcEEEEeCCCH----HHHHHHhccC---CCEEEECCCcccCHHHHHHHHHHhhhccCCeEEEEeCCcccCCHHHHHHHHh
Confidence 47777765322 2233332222 45666543 2457778888899887 57999999999975 8999999998
Q ss_pred H
Q 023346 180 Q 180 (283)
Q Consensus 180 ~ 180 (283)
.
T Consensus 120 ~ 120 (199)
T 2waw_A 120 G 120 (199)
T ss_dssp H
T ss_pred h
Confidence 7
No 35
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=93.36 E-value=1.3 Score=35.11 Aligned_cols=76 Identities=16% Similarity=0.276 Sum_probs=49.8
Q ss_pred eEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHHcC--CCEEEEEeCCC-CCChhhHHHHHHH
Q 023346 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSR--GELLLMLDADG-ATKVTDLEKLESQ 180 (283)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~gk~~a~n~g~~~a~--~d~i~~~D~D~-~~~~~~l~~~~~~ 180 (283)
-+|+|+-+.. ..++.+.+...+. .++.++. ...|...++..|++... .++++++|+|. .+.++.++++++.
T Consensus 49 ~~ivvv~~~~---~~~~~~~~~~~~~-~~v~~~~--~~~~~~~sv~~al~~~~~~~~~vl~~d~d~P~~~~~~i~~l~~~ 122 (228)
T 2yc3_A 49 KEIVVVCDPF---FRDIFEEYEESID-VDLSFAI--PGKERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKD 122 (228)
T ss_dssp EEEEEECCGG---GHHHHHTTTTTSS-SEEEEEC--CCSSHHHHHHHHHTTSCTTCSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred CeEEEEEChH---HHHHHHHHHHhCC-CcEEEEC--CCCCHHHHHHHHHHhhccCCCEEEEecCCCccCCHHHHHHHHHH
Confidence 4777775422 2233333332222 2355553 24688888888988765 48999999996 5689999999998
Q ss_pred HHHcC
Q 023346 181 IHAVG 185 (283)
Q Consensus 181 ~~~~~ 185 (283)
+.+.+
T Consensus 123 ~~~~~ 127 (228)
T 2yc3_A 123 GSAVG 127 (228)
T ss_dssp HHHHS
T ss_pred HHhcC
Confidence 87654
No 36
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=93.33 E-value=0.4 Score=38.03 Aligned_cols=86 Identities=15% Similarity=0.139 Sum_probs=58.8
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcC-CCCCHHHHHHHHHHH
Q 023346 76 NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG-RNHGKGEAIRKGMLH 154 (283)
Q Consensus 76 ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~-~~~gk~~a~n~g~~~ 154 (283)
+....|...++.+.. . +|+||-+. + +..+.+...+ +++++..+ ...|...++..|++.
T Consensus 24 ~G~pli~~~~~~l~~------------~-~vvvv~~~--~---~~~~~~~~~~---~~~~v~d~~~~~G~~~si~~gl~~ 82 (208)
T 3ngw_A 24 CGKKLIEWVLEKYSP------------F-QTVFVCRD--E---KQAEKLSSRY---EAEFIWDLHKGVGSIAGIHAALRH 82 (208)
T ss_dssp TTEEHHHHHHHHHTT------------S-EEEEECSS--H---HHHHHHHTTS---CSCEECCTTCCCSHHHHHHHHHHH
T ss_pred CCeeHHHHHHHHhcC------------C-CEEEEECC--H---HHHHHHHHhc---CCeEEecCCCCCChHHHHHHHHHH
Confidence 555556666665543 2 88888642 1 2233333323 35566543 245788999999999
Q ss_pred cCCCEEEEEeCCCCC-ChhhHHHHHHHHHHc
Q 023346 155 SRGELLLMLDADGAT-KVTDLEKLESQIHAV 184 (283)
Q Consensus 155 a~~d~i~~~D~D~~~-~~~~l~~~~~~~~~~ 184 (283)
+ .+++ ++++|..+ +++.++++++.+.+.
T Consensus 83 ~-~~~v-v~~~D~P~i~~~~i~~l~~~~~~~ 111 (208)
T 3ngw_A 83 F-GSCV-VAAIDMPFVKPEVLEHLYKEGEKA 111 (208)
T ss_dssp H-SSEE-EEETTCTTCCHHHHHHHHHHHHHH
T ss_pred c-CCCE-EEECCccCCCHHHHHHHHHHhhcC
Confidence 8 9999 99999955 899999999988753
No 37
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=92.85 E-value=0.14 Score=42.60 Aligned_cols=55 Identities=18% Similarity=0.111 Sum_probs=45.7
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHcCCCEEEEEeCCCCCChh----hHHHHHHHHHHcCC
Q 023346 132 NVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVT----DLEKLESQIHAVGR 186 (283)
Q Consensus 132 ~~~~~~~~~~~gk~~a~n~g~~~a~~d~i~~~D~D~~~~~~----~l~~~~~~~~~~~~ 186 (283)
.+.++..+...|.+.++..|+.....+.++++.+|..+.++ .+.++++.+.+...
T Consensus 96 ~i~~~~~~~~~Gt~~al~~a~~~l~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~~ 154 (281)
T 3juk_A 96 CFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQC 154 (281)
T ss_dssp EEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEEECTTSCCHHHHHHHHHHHHCS
T ss_pred cEEEEecCCCCCcHHHHHHHHHHcCCCCEEEEeCCeeccCccchHHHHHHHHHHHHcCC
Confidence 56667777778999999999988877889999999988888 89999998876554
No 38
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=92.36 E-value=0.74 Score=41.66 Aligned_cols=106 Identities=12% Similarity=0.129 Sum_probs=70.2
Q ss_pred EEeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHH
Q 023346 71 IIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRK 150 (283)
Q Consensus 71 iip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~gk~~a~n~ 150 (283)
++|..|.. .|.-.|+.+.+ ...-||+||-..-.+.-.+.+.+....+. .+++++..++..|-+.|+..
T Consensus 34 l~pv~gkp-~i~~~l~~~~~----------~g~~~i~vv~~~~~~~i~~~~~~~~~~~~-~~i~~~~q~~~lGTa~Av~~ 101 (501)
T 3st8_A 34 LHTLAGRS-MLSHVLHAIAK----------LAPQRLIVVLGHDHQRIAPLVGELADTLG-RTIDVALQDRPLGTGHAVLC 101 (501)
T ss_dssp GCEETTEE-HHHHHHHHHHH----------HCCSEEEEEECTTHHHHHHHHHHHHHHHT-SCCEEEECSSCCCHHHHHHH
T ss_pred HeEECChh-HHHHHHHHHHh----------CCCCEEEEEeCCCHHHHHHHHHHHHHhcC-CcEEEEEcCCCCCcHHHHHH
Confidence 56666653 44444444443 22457888876544555555555444443 47888888888999999999
Q ss_pred HHHHcCC---CEEEEEeCCC-CCChhhHHHHHHHHHHcCCcc
Q 023346 151 GMLHSRG---ELLLMLDADG-ATKVTDLEKLESQIHAVGRKE 188 (283)
Q Consensus 151 g~~~a~~---d~i~~~D~D~-~~~~~~l~~~~~~~~~~~~~~ 188 (283)
++..... +.++++.+|+ .+..+.+.++++.........
T Consensus 102 a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ 143 (501)
T 3st8_A 102 GLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAV 143 (501)
T ss_dssp HHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSE
T ss_pred HHHHhccccccceeeecCcceeecHHHHHHHHHHHhhccccc
Confidence 9988653 3566666665 567889999999887665543
No 39
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=92.31 E-value=1.9 Score=35.19 Aligned_cols=89 Identities=10% Similarity=0.261 Sum_probs=54.0
Q ss_pred CCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcC--CCCCHHHHHHHHHHH
Q 023346 77 EEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG--RNHGKGEAIRKGMLH 154 (283)
Q Consensus 77 e~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~--~~~gk~~a~n~g~~~ 154 (283)
....|..+++.+.+ . . .-+|+|+.+. +. +.++..++ ++.++.++ ...|.+ .+..+++.
T Consensus 26 gkpli~~~l~~l~~--------~-~-~~~ivvv~~~--~~----i~~~~~~~---~~~~~~~~~~~~~g~~-~~~~~~~~ 85 (262)
T 1vic_A 26 GKPMIQHVFEKALQ--------S-G-ASRVIIATDN--EN----VADVAKSF---GAEVCMTSVNHNSGTE-RLAEVVEK 85 (262)
T ss_dssp TEEHHHHHHHHHHH--------T-T-CSEEEEEESC--HH----HHHHHHHT---TCEEEECCCSSCCHHH-HHHHHHHH
T ss_pred CeEHHHHHHHHHHh--------C-C-CceEEEECCc--HH----HHHHHHhc---CCEEEECCccccCChH-HHHHHHHH
Confidence 44566666666655 1 2 2578888652 22 23333333 46666653 234444 33344443
Q ss_pred c---CCCEEEEEeCCCC-CChhhHHHHHHHHHHcC
Q 023346 155 S---RGELLLMLDADGA-TKVTDLEKLESQIHAVG 185 (283)
Q Consensus 155 a---~~d~i~~~D~D~~-~~~~~l~~~~~~~~~~~ 185 (283)
. ..++++++++|.. +.+..++++++.+.+.+
T Consensus 86 l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~ 120 (262)
T 1vic_A 86 LAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFN 120 (262)
T ss_dssp TTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHHT
T ss_pred hccCCCCEEEEEeCCcCccCHHHHHHHHHHHHhcC
Confidence 3 5699999999995 58999999999887654
No 40
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=92.29 E-value=0.33 Score=43.22 Aligned_cols=89 Identities=17% Similarity=0.211 Sum_probs=58.3
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHHcC-
Q 023346 78 EHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSR- 156 (283)
Q Consensus 78 ~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~gk~~a~n~g~~~a~- 156 (283)
...|...++.+.+ . . --+|+|+-.... +.++++.... +++++..+...|.+.++..|++...
T Consensus 36 ~pli~~~l~~l~~--------~-~-~~~i~vv~~~~~----~~i~~~~~~~---~~~~v~~~~~~g~~~~i~~~~~~~~~ 98 (459)
T 4fce_A 36 KPMVQHVIDAAMK--------L-G-AQHVHLVYGHGG----ELLKKTLADP---SLNWVLQAEQLGTGHAMQQAAPHFAD 98 (459)
T ss_dssp EEHHHHHHHHHHH--------H-T-CSCEEEEESSCH----HHHHHHC--------CEEECSSCCCHHHHHHHHGGGSCT
T ss_pred eeHHHHHHHHHHh--------C-C-CCcEEEEeCCCH----HHHHHHhccC---CcEEEeCCCCCCcHHHHHHHHHhcCC
Confidence 3455555555554 1 1 236777764332 2233332222 4677777777899999999998876
Q ss_pred CCEEEEEeCCC-CCChhhHHHHHHHHHH
Q 023346 157 GELLLMLDADG-ATKVTDLEKLESQIHA 183 (283)
Q Consensus 157 ~d~i~~~D~D~-~~~~~~l~~~~~~~~~ 183 (283)
.+.++++++|. .+.+..++++++.+.+
T Consensus 99 ~~~~lv~~~D~P~i~~~~i~~l~~~~~~ 126 (459)
T 4fce_A 99 DEDILMLYGDVPLISVDTLQRLLAAKPE 126 (459)
T ss_dssp TSEEEEEETTCTTCCHHHHHHHHHHCCT
T ss_pred CCcEEEEeCCcccCCHHHHHHHHHHHhh
Confidence 48999999999 5689999999987754
No 41
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=91.69 E-value=0.58 Score=38.54 Aligned_cols=54 Identities=7% Similarity=0.075 Sum_probs=42.8
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHcCCCEEEEEeCCCCCChhhHHHHHHHHHHcCC
Q 023346 132 NVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGR 186 (283)
Q Consensus 132 ~~~~~~~~~~~gk~~a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~~~~~~~~~~~ 186 (283)
.+.++..+...|.+.++..|++....+.++++.+|.... ..+.++++.+.+...
T Consensus 98 ~i~~~~~~~~~G~~~al~~a~~~~~~~~~lv~~~D~~~~-~~l~~l~~~~~~~~~ 151 (269)
T 4ecm_A 98 SFTYRVQDKAGGIAQALGLCEDFVGNDRMVVILGDNIFS-DDIRPYVEEFTNQKE 151 (269)
T ss_dssp EEEEEECSSCCCHHHHHHTTHHHHTTSEEEEEETTEEES-SCSHHHHHHHHTSSS
T ss_pred eEEEeeCCccCcHHHHHHHHHHhcCCCcEEEEeCCccCc-cCHHHHHHHHHhcCC
Confidence 466666666789999999998887789999999999776 678888888865443
No 42
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=91.66 E-value=0.11 Score=40.86 Aligned_cols=49 Identities=16% Similarity=0.258 Sum_probs=39.5
Q ss_pred cEEEEEcCC-CCCHHHHHHHHHHHcCC-CEEEEEeCCC-CCChhhHHHHHHHH
Q 023346 132 NVRIILLGR-NHGKGEAIRKGMLHSRG-ELLLMLDADG-ATKVTDLEKLESQI 181 (283)
Q Consensus 132 ~~~~~~~~~-~~gk~~a~n~g~~~a~~-d~i~~~D~D~-~~~~~~l~~~~~~~ 181 (283)
++ ++.++. ..|...++..|++.... +.++++++|. .++++.++++++.+
T Consensus 61 ~~-~v~~~~~~~G~~~si~~al~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 112 (197)
T 3d5n_A 61 QI-VIYNPFWNEGISTSLKLGLRFFKDYDAVLVALGDMPFVTKEDVNKIINTF 112 (197)
T ss_dssp SC-EEECTTGGGCHHHHHHHHHHHTTTSSEEEEEETTCCCSCHHHHHHHHHTC
T ss_pred CE-EEECCCCCCCHHHHHHHHHHhhccCCcEEEEeCCccccCHHHHHHHHHHh
Confidence 45 665543 36889999999998865 8999999999 46899999998876
No 43
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=91.62 E-value=0.58 Score=36.61 Aligned_cols=35 Identities=14% Similarity=0.008 Sum_probs=28.2
Q ss_pred HHHHHHHHHHH----cCCCEEEEEeCC---CCCChhhHHHHH
Q 023346 144 KGEAIRKGMLH----SRGELLLMLDAD---GATKVTDLEKLE 178 (283)
Q Consensus 144 k~~a~n~g~~~----a~~d~i~~~D~D---~~~~~~~l~~~~ 178 (283)
-..|+|..+.. .+.|+++++||| ...+|+.+.+++
T Consensus 37 I~raRN~lv~~Fl~~~~~dhllfIDAD~~~I~FdPe~V~rLl 78 (203)
T 2c0n_A 37 VAVQREIALDMFLEMKDYDTLAFLDEDVVPIEIDFQKVEAKF 78 (203)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEECTTEEEEECCHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCCEEEEEeCCCCccccCHHHHHHHH
Confidence 44555555544 567999999999 999999999998
No 44
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=91.59 E-value=2.5 Score=33.52 Aligned_cols=45 Identities=4% Similarity=0.022 Sum_probs=36.3
Q ss_pred CCCHHHHHHHHHHHc----C---CCEEEEEeCCC-CCChhhHHHHHHHHHHcC
Q 023346 141 NHGKGEAIRKGMLHS----R---GELLLMLDADG-ATKVTDLEKLESQIHAVG 185 (283)
Q Consensus 141 ~~gk~~a~n~g~~~a----~---~d~i~~~D~D~-~~~~~~l~~~~~~~~~~~ 185 (283)
..|...++..|++.. . .++++++++|. .+.++.++++++.+.+.+
T Consensus 83 ~~~~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~ 135 (236)
T 2vsh_A 83 GADRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHD 135 (236)
T ss_dssp CSSHHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSS
T ss_pred CCchHHHHHHHHHHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcC
Confidence 357788888888776 3 48999999999 668999999999887653
No 45
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=91.40 E-value=0.96 Score=36.22 Aligned_cols=76 Identities=12% Similarity=0.113 Sum_probs=50.7
Q ss_pred ceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHHcC-CCEEEEEeCCCC-CChhhHHHHHHH
Q 023346 103 TYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSR-GELLLMLDADGA-TKVTDLEKLESQ 180 (283)
Q Consensus 103 ~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~gk~~a~n~g~~~a~-~d~i~~~D~D~~-~~~~~l~~~~~~ 180 (283)
--+|+||-+...+...+ +. .++...++++.. ..|...++..|++... .++++++++|.. ++++.++++++.
T Consensus 51 ~~~ivvv~~~~~~~~~~-~~----~~~~~~v~~~~~--~~g~~~~i~~al~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~ 123 (236)
T 1i52_A 51 VKRVVIAISPGDSRFAQ-LP----LANHPQITVVDG--GDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLAL 123 (236)
T ss_dssp EEEEEEEECTTCCSGGG-SG----GGGCTTEEEEEC--CSSHHHHHHHHHHTSTTCSEEEECCTTCTTCCHHHHHHHHGG
T ss_pred CCeEEEEeCccHHHHHH-HH----hcCCCCEEEECC--CCCHHHHHHHHHHhcCCCCEEEEEcCccccCCHHHHHHHHHH
Confidence 34777776643333322 22 221114666543 3588888889998874 799999999985 588999999987
Q ss_pred HHHcC
Q 023346 181 IHAVG 185 (283)
Q Consensus 181 ~~~~~ 185 (283)
+.+.+
T Consensus 124 ~~~~~ 128 (236)
T 1i52_A 124 SETSR 128 (236)
T ss_dssp GGTCS
T ss_pred HHhcC
Confidence 75543
No 46
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=91.37 E-value=0.62 Score=39.18 Aligned_cols=100 Identities=10% Similarity=0.045 Sum_probs=63.1
Q ss_pred EEeec-CCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCC-cchHHHHHHHHHHcCCCcEEEEEcC---------
Q 023346 71 IIPAF-NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSS-DGTKRVAFDFVRKYTVDNVRIILLG--------- 139 (283)
Q Consensus 71 iip~~-ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~-d~t~~~~~~~~~~~~~~~~~~~~~~--------- 139 (283)
++|.- +....|..+|+.+.+. .--+|+||-.... +...+.+...... ..++.++..+
T Consensus 25 l~~ig~~g~pli~~~l~~~~~~----------~~~~i~vv~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~ 92 (303)
T 3pnn_A 25 LDGIGPGGDTIMDYSVYDAIRA----------GFGRLVFVIRHSFEKEFREKILTKYEG--RIPVELVFQELDRLPEGFS 92 (303)
T ss_dssp CCCCSTTSCCHHHHHHHHHHHH----------TCCEEEEEECGGGHHHHHHHTHHHHTT--TSCEEEEECCTTCCCTTCC
T ss_pred EeEcCCCCeeHHHHHHHHHHHC----------CCCeEEEEcCchHHHHHHHHHHHHhcc--CCcEEEEeccccccccccc
Confidence 34553 3456677777766551 1347777765331 2233333221111 1257777665
Q ss_pred ------CCCCHHHHHHHHHHHcCCCEEEEEeCCCCCChhhHHHHHHHHHH
Q 023346 140 ------RNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHA 183 (283)
Q Consensus 140 ------~~~gk~~a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~~~~~~~~ 183 (283)
...|.+.|+-.+......+ ++++.+|....++.++++++.+.+
T Consensus 93 ~~~~~~~~~Gt~~al~~a~~~i~~~-~lV~~gD~l~~~~~~~~l~~~~~~ 141 (303)
T 3pnn_A 93 CPEGREKPWGTNHAVLMGRDAIREP-FAVINADDFYGRNGFEVLARKLMT 141 (303)
T ss_dssp CCTTCCSCCCHHHHHHTTTTTCCSC-EEEEESSCBCCHHHHHHHHHHHHT
T ss_pred ccccccccCCcHHHHHHHHHhcCCC-EEEEECCeecCHHHHHHHHHHHHH
Confidence 4689999998888877544 566789999999999999998875
No 47
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=90.90 E-value=0.42 Score=37.59 Aligned_cols=49 Identities=18% Similarity=0.178 Sum_probs=40.4
Q ss_pred cEEEEEcCC-C-CCHHHHHHHHHHHcCCCEEEEEeCCC-CCChhhHHHHHHH
Q 023346 132 NVRIILLGR-N-HGKGEAIRKGMLHSRGELLLMLDADG-ATKVTDLEKLESQ 180 (283)
Q Consensus 132 ~~~~~~~~~-~-~gk~~a~n~g~~~a~~d~i~~~D~D~-~~~~~~l~~~~~~ 180 (283)
++.++..+. . .|...++..|++....++++++++|. .+.++.++++++.
T Consensus 65 ~~~~v~~~~~~~~G~~~si~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 65 GLKVIEDSLADYPGPLAGMLSVMQQEAGEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp SCCEECCCTTCCCSHHHHHHHHHHHCCSSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred CCeEEecCCCCCCCHHHHHHHHHHhCCCCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 466665542 3 68999999999999899999999999 5689999999876
No 48
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=90.67 E-value=0.38 Score=40.25 Aligned_cols=54 Identities=19% Similarity=0.125 Sum_probs=45.0
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHcCCCEEEEEeCCCCCC--hhhHHHHHHHHHHcC
Q 023346 132 NVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATK--VTDLEKLESQIHAVG 185 (283)
Q Consensus 132 ~~~~~~~~~~~gk~~a~n~g~~~a~~d~i~~~D~D~~~~--~~~l~~~~~~~~~~~ 185 (283)
++.++..+...|.+.++..|+.....+.++++.+|..+. +..++++++.+.+..
T Consensus 107 ~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~~ 162 (297)
T 2ux8_A 107 NIAYVRQQEPMGLGHAVWCARDIVGDEPFAVLLPDDFMFGQPGCLKQMVDAYNKVG 162 (297)
T ss_dssp SEEEEECCSCCCHHHHHHTTHHHHCSSCEEEECTTEEEESSSCHHHHHHHHHHHHC
T ss_pred ceEEEeCCCCCChHHHHHHHHHHcCCCcEEEEeCCeecCCChHHHHHHHHHHHhcC
Confidence 577777776789999999988887778899999999987 688999999887654
No 49
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=90.37 E-value=2.4 Score=35.60 Aligned_cols=95 Identities=16% Similarity=0.210 Sum_probs=60.3
Q ss_pred EeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHH-cCCCcEEEEEcCCCCCHHHHHHH
Q 023346 72 IPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRK-YTVDNVRIILLGRNHGKGEAIRK 150 (283)
Q Consensus 72 ip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~-~~~~~~~~~~~~~~~gk~~a~n~ 150 (283)
+|..+....|..+++.+.+ . --+|+|+-+.. ..+.+.+.... +..+++.++..+...|.+.++..
T Consensus 31 l~i~gg~pli~~~l~~l~~---------~--~~~i~vv~~~~---~~~~i~~~~~~~~~~~~~~~i~~~~~~gt~~al~~ 96 (308)
T 2qh5_A 31 LKLFDHKSLFELSFKRNAS---------L--VDETLIVCNEK---HYFLALEEIKNEIKNKSVGFLLESLSKNTANAIAL 96 (308)
T ss_dssp CTTBTTBCHHHHHHHHHHT---------T--CSEEEEEEEGG---GHHHHHHHTTTTCSSCEEEEEEESSCCCHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHc---------c--CCCEEEEEChh---HHHHHHHHHHHhhCCCccEEEeCCCCCChHHHHHH
Confidence 3443455666666666654 1 23677665421 22233333333 32114666766667899999888
Q ss_pred HHHHcC-CCEEEEEeCCCCC-ChhhHHHHHHH
Q 023346 151 GMLHSR-GELLLMLDADGAT-KVTDLEKLESQ 180 (283)
Q Consensus 151 g~~~a~-~d~i~~~D~D~~~-~~~~l~~~~~~ 180 (283)
+..... .++++++.+|... +++.+.++++.
T Consensus 97 a~~~l~~~~~~lv~~~D~~~~~~~~~~~~~~~ 128 (308)
T 2qh5_A 97 SALMSDKEDLLIVTPSDHLIKDLQAYENAIKK 128 (308)
T ss_dssp HHHTSCTTSEEEEEESSCBCCCHHHHHHHHHH
T ss_pred HHHHhCCCCeEEEEcCCccccCHHHHHHHHHH
Confidence 888775 4589999999988 78889999886
No 50
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=90.32 E-value=0.16 Score=39.59 Aligned_cols=92 Identities=14% Similarity=0.127 Sum_probs=54.4
Q ss_pred CCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcC-CCcEEEEEcCCCCCHHHHHHHHHHHc
Q 023346 77 EEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYT-VDNVRIILLGRNHGKGEAIRKGMLHS 155 (283)
Q Consensus 77 e~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~-~~~~~~~~~~~~~gk~~a~n~g~~~a 155 (283)
....|..+++.+.+ .. --+|+|+-+...+...+.+.+ .++ ..++.++..+ ..|...++..|++..
T Consensus 26 g~pli~~~l~~l~~---------~~-~~~v~vv~~~~~~~i~~~~~~---~~~~~~~~~~~~~~-~~g~~~si~~al~~~ 91 (196)
T 3rsb_A 26 GRCLIDYVVSPLLK---------SK-VNNIFIATSPNTPKTKEYINS---AYKDYKNIVVIDTS-GKGYIEDLNECIGYF 91 (196)
T ss_dssp TEEHHHHHHHHHHS---------SS-CCCEEEECCTTCHHHHHHHHH---HTTTTTEEEE---------CCCCCTTTTTC
T ss_pred CEEHHHHHHHHHHH---------CC-CCEEEEEeCCChHHHHHHHHh---hccCCCCEEEEECC-CCCcHHHHHHHHHhC
Confidence 34555666665554 12 347777765444334444433 121 0145666543 456666777777777
Q ss_pred CCCEEEEEeCCCC-CChhhHHHHHHHHHH
Q 023346 156 RGELLLMLDADGA-TKVTDLEKLESQIHA 183 (283)
Q Consensus 156 ~~d~i~~~D~D~~-~~~~~l~~~~~~~~~ 183 (283)
.+.++++.+|.. +.++.++++++.+.+
T Consensus 92 -~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 119 (196)
T 3rsb_A 92 -SEPFLVVSSDLINLKSKIINSIVDYFYC 119 (196)
T ss_dssp -SSCEEEEETTEESCCHHHHHHHHHHHHH
T ss_pred -CCCEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 899999999995 599999999999976
No 51
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=90.16 E-value=1.3 Score=35.88 Aligned_cols=97 Identities=16% Similarity=0.157 Sum_probs=59.8
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcC-CCcEEEEEcCCCCCHHHHHHHHHHH
Q 023346 76 NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYT-VDNVRIILLGRNHGKGEAIRKGMLH 154 (283)
Q Consensus 76 ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~-~~~~~~~~~~~~~gk~~a~n~g~~~ 154 (283)
+..+.|..+|+.+.+ ...--+|+||-+... .+.+++...++. ...+.++.. ..+...+.-.|++.
T Consensus 30 ~Gkpll~~~l~~~~~---------~~~~~~ivvv~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~sv~~al~~ 95 (246)
T 3f1c_A 30 NGKPIIVHTVEKFIL---------NTRFDKILISSPKEW---MNHAEDNIKKYISDDRIVVIEG--GEDRNETIMNGIRF 95 (246)
T ss_dssp TTEEHHHHHHHHHHT---------CTTCSEEEEEECGGG---HHHHHHHHHHHCCCTTEEEEEC--CSSHHHHHHHHHHH
T ss_pred CCeeHHHHHHHHHHc---------CCCCCEEEEEeCHHH---HHHHHHHHHHhCCCCCEEEECC--CCchHHHHHHHHHH
Confidence 344566666666654 222357777765322 222333333321 125666653 34666777777776
Q ss_pred cC-------CCEEEEEeCCC-CCChhhHHHHHHHHHHcCC
Q 023346 155 SR-------GELLLMLDADG-ATKVTDLEKLESQIHAVGR 186 (283)
Q Consensus 155 a~-------~d~i~~~D~D~-~~~~~~l~~~~~~~~~~~~ 186 (283)
.. .++++++|+|. .+.++.++++++.+.+.+.
T Consensus 96 l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a 135 (246)
T 3f1c_A 96 VEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETGA 135 (246)
T ss_dssp HHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTSE
T ss_pred HhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcCC
Confidence 53 58999999997 5589999999999987643
No 52
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=89.89 E-value=3.4 Score=33.15 Aligned_cols=90 Identities=12% Similarity=0.152 Sum_probs=57.5
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHHc
Q 023346 76 NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHS 155 (283)
Q Consensus 76 ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~gk~~a~n~g~~~a 155 (283)
+..+.|..+++.+.+ ...--+|+||-+... .+.++++... .+.++.. ..+...+.-.|++..
T Consensus 33 ~Gkpll~~~l~~~~~---------~~~~~~ivVv~~~~~---~~~~~~~~~~----~v~~v~g--g~~r~~sv~~gl~~~ 94 (231)
T 3q80_A 33 DGQTLIERAVDGLLD---------SGVVDTVVVAVPADR---TDEARQILGH----RAMIVAG--GSNRTDTVNLALTVL 94 (231)
T ss_dssp TTEEHHHHHHHHHHH---------TSCCCEEEEEECGGG---HHHHHHHHGG----GCEEEEC--CSSHHHHHHHHHGGG
T ss_pred CCeEHHHHHHHHHHh---------CCCCCeEEEECChHH---HHHHHHHhcC----CeEEEcC--CCchHHHHHHHHHHh
Confidence 445556666666654 122347888765322 2233333322 3556653 234567788888876
Q ss_pred C----CCEEEEEeCCCCC-ChhhHHHHHHHHHH
Q 023346 156 R----GELLLMLDADGAT-KVTDLEKLESQIHA 183 (283)
Q Consensus 156 ~----~d~i~~~D~D~~~-~~~~l~~~~~~~~~ 183 (283)
. .++++++|+|..+ +++.++++++.+.+
T Consensus 95 ~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 95 SGTAEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp C---CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred hhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 5 4899999999765 89999999999876
No 53
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=89.68 E-value=1.1 Score=37.36 Aligned_cols=98 Identities=13% Similarity=0.130 Sum_probs=60.8
Q ss_pred EeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHH---cCCCcEEEEEcCCCCCHHHHH
Q 023346 72 IPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRK---YTVDNVRIILLGRNHGKGEAI 148 (283)
Q Consensus 72 ip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~---~~~~~~~~~~~~~~~gk~~a~ 148 (283)
+|.++. +.|...++.+.. ..--+|+||..+.+. +.++++... +. ..+.++..+...|.+.++
T Consensus 28 lpi~gk-pli~~~l~~l~~----------~gi~~I~vv~~~~~~---~~i~~~l~~g~~~g-~~i~~~~~~~~~G~~~al 92 (293)
T 1fxo_A 28 LPVYDK-PMIYYPLSTLML----------AGIREILIISTPQDT---PRFQQLLGDGSNWG-LDLQYAVQPSPDGLAQAF 92 (293)
T ss_dssp SEETTE-ETTHHHHHHHHH----------TTCCEEEEEECTTTH---HHHHHHHTTSGGGT-CEEEEEECSSCCCGGGHH
T ss_pred CeECCE-eHHHHHHHHHHH----------CCCCEEEEEeccccH---HHHHHHHhcccccC-ceEEEeeCCCCCCHHHHH
Confidence 455654 777777777765 113478777533221 222333322 22 245666666678888888
Q ss_pred HHHHHHcCCCEEEEEeCCCCCChhhHHHHHHHHHHc
Q 023346 149 RKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAV 184 (283)
Q Consensus 149 n~g~~~a~~d~i~~~D~D~~~~~~~l~~~~~~~~~~ 184 (283)
..|++....+-++++.+|..+....+.++++.+.+.
T Consensus 93 ~~a~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~~ 128 (293)
T 1fxo_A 93 LIGESFIGNDLSALVLGDNLYYGHDFHELLGSASQR 128 (293)
T ss_dssp HHTHHHHTTSEEEEEETTEEEECTTHHHHHHHHHTC
T ss_pred HHHHHHhCCCCEEEEECChhccCccHHHHHHHHHhc
Confidence 888887765655556699877556788888877544
No 54
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=89.66 E-value=1.1 Score=39.87 Aligned_cols=89 Identities=15% Similarity=0.159 Sum_probs=59.0
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHHcC-
Q 023346 78 EHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSR- 156 (283)
Q Consensus 78 ~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~gk~~a~n~g~~~a~- 156 (283)
...|...++.+.+ . . --+|+|+-+.. .+.++++..++ +++++..+...|.+.++..|++...
T Consensus 33 kpli~~~l~~l~~--------~-~-~~~iivv~~~~----~~~i~~~~~~~---~~~~v~~~~~~g~~~~~~~~~~~~~~ 95 (456)
T 2v0h_A 33 KPMVKHVIDTAHQ--------L-G-SENIHLIYGHG----GDLMRTHLANE---QVNWVLQTEQLGTAHAVQQAAPFFKD 95 (456)
T ss_dssp EEHHHHHHHHHHH--------T-T-CSCEEEEECTT----HHHHHHHTTTC---CCEEEECSCCCCHHHHHHHHGGGCCT
T ss_pred ccHHHHHHHHHHh--------C-C-CCcEEEEeCCC----HHHHHHHhhcC---CcEEEeCCCCCCcHHHHHHHHHhcCC
Confidence 3455555555554 1 1 23677765532 12333333222 4667776667899999999998875
Q ss_pred CCEEEEEeCCCC-CChhhHHHHHHHHHH
Q 023346 157 GELLLMLDADGA-TKVTDLEKLESQIHA 183 (283)
Q Consensus 157 ~d~i~~~D~D~~-~~~~~l~~~~~~~~~ 183 (283)
.+.++++++|.. +.+..++++++.+.+
T Consensus 96 ~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 123 (456)
T 2v0h_A 96 NENIVVLYGDAPLITKETLEKLIEAKPE 123 (456)
T ss_dssp TSEEEEEETTCTTCCHHHHHHHHHHCCT
T ss_pred CCeEEEEcCCcceeCHHHHHHHHHHHhc
Confidence 799999999995 688999999887654
No 55
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=89.60 E-value=6 Score=30.66 Aligned_cols=94 Identities=18% Similarity=0.233 Sum_probs=60.6
Q ss_pred ceEEEEEeecCCCCChH--H---------HHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEE
Q 023346 66 KYISLIIPAFNEEHRLP--G---------ALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVR 134 (283)
Q Consensus 66 p~vsviip~~ne~~~l~--~---------~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~ 134 (283)
+++.+||++-+....+. + .++.+++.+.. . --+|+||-+.... +.+. +++
T Consensus 13 ~~~~~iILA~G~g~Rmg~~K~ll~i~g~pll~~~l~~l~~------~-~~~i~vv~~~~~~------~~~~------~~~ 73 (201)
T 2e8b_A 13 KVNTCYVLAGGKSKRFGEDKLLYEIKGKKVIERVYETAKS------V-FKEVYIVAKDREK------FSFL------NAP 73 (201)
T ss_dssp SCCEEEEEEESSCCCCSTTHHHHHHHHHHHHHHHHHHHHT------T-CSEEEEEESCSGG------GGGG------TCC
T ss_pred cCceEEEECCCCCccCCCCcccceECceEHHHHHHHHHHH------h-CCEEEEEeCcHHH------hhcC------Cce
Confidence 34678888877665542 2 22233332221 1 3477777653322 1111 255
Q ss_pred EEEcC-CCCCHHHHHHHHHHHcCCCEEEEEeCCCCC-ChhhHHH-HH
Q 023346 135 IILLG-RNHGKGEAIRKGMLHSRGELLLMLDADGAT-KVTDLEK-LE 178 (283)
Q Consensus 135 ~~~~~-~~~gk~~a~n~g~~~a~~d~i~~~D~D~~~-~~~~l~~-~~ 178 (283)
++..+ ...|.+.++..|++....+.++++.+|..+ +++.+++ ++
T Consensus 74 ~v~~~~~~~g~~~~i~~al~~~~~~~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 74 VVLDEFEESASIIGLYTALKHAKEENVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp EEECCCSSCCHHHHHHHHHHHCSSSEEEEEETTCTTCCHHHHHHHHH
T ss_pred EEecCCCCCCcHHHHHHHHHHcCCCCEEEEeCCcCcCCHHHHHHHHh
Confidence 66644 357999999999999888999999999965 8888888 77
No 56
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=89.47 E-value=0.93 Score=40.44 Aligned_cols=91 Identities=9% Similarity=0.010 Sum_probs=60.9
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHHcC-
Q 023346 78 EHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSR- 156 (283)
Q Consensus 78 ~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~gk~~a~n~g~~~a~- 156 (283)
.+.|...++.+.+ ..--+|+|+-+.. .+.++++..+ ++.++..+...|.+.++..|++...
T Consensus 39 kpli~~~l~~l~~----------~g~~~iivv~~~~----~~~i~~~~~~----~i~~v~~~~~~G~~~sl~~a~~~~~~ 100 (468)
T 1hm9_A 39 ISMLEHVFRSVGA----------IQPEKTVTVVGHK----AELVEEVLAG----QTEFVTQSEQLGTGHAVMMTEPILEG 100 (468)
T ss_dssp EEHHHHHHHHHHT----------TCCSEEEEEECTT----HHHHHHSSSS----SSEEEECSSCCCHHHHHHTTHHHHTT
T ss_pred ccHHHHHHHHHHh----------cCCCCEEEEECCC----HHHHHHHhCC----CcEEEeCCccCChHHHHHHHHHHhcc
Confidence 3556666665544 1234777775432 1222222211 4667766667899999998888775
Q ss_pred -CCEEEEEeCCCC-CChhhHHHHHHHHHHcCC
Q 023346 157 -GELLLMLDADGA-TKVTDLEKLESQIHAVGR 186 (283)
Q Consensus 157 -~d~i~~~D~D~~-~~~~~l~~~~~~~~~~~~ 186 (283)
.+.++++++|.. +.+..++++++.+.+...
T Consensus 101 ~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~ 132 (468)
T 1hm9_A 101 LSGHTLVIAGDTPLITGESLKNLIDFHINHKN 132 (468)
T ss_dssp CCSEEEEEETTCTTCCHHHHHHHHHHHHHTTC
T ss_pred CCCeEEEEeCCccccCHHHHHHHHHHHHhcCC
Confidence 689999999996 689999999998876543
No 57
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=89.25 E-value=3.8 Score=32.12 Aligned_cols=88 Identities=14% Similarity=0.072 Sum_probs=56.6
Q ss_pred CCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHHc-
Q 023346 77 EEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHS- 155 (283)
Q Consensus 77 e~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~gk~~a~n~g~~~a- 155 (283)
....|..+++.+.+. ..--+|+|+-+... .+.++++.. . .++.++.. ..+...++..|++..
T Consensus 29 g~pli~~~l~~l~~~---------~~~~~i~vv~~~~~---~~~~~~~~~-~--~~v~~~~~--~~~~~~~i~~al~~~~ 91 (223)
T 2xwl_A 29 GTPLLEHALSGLRAS---------GVIDRIVIAVPPAL---TDESKLVFG-G--EDSVIVSG--GVDRTESVALALEAAG 91 (223)
T ss_dssp TEEHHHHHHHHHHHH---------SCCSEEEEEECGGG---HHHHHHHTC-B--TTEEEEEC--CSSHHHHHHHHHTTCT
T ss_pred CeEHHHHHHHHHhcC---------CCCCeEEEEEcccH---HHHHHHHhc-c--CCeEEEcC--CCCHHHHHHHHHHhcC
Confidence 445566666665541 11237777765321 222333321 1 25766654 346788888899887
Q ss_pred CCCEEEEEeCCCC-CChhhHHHHHHHH
Q 023346 156 RGELLLMLDADGA-TKVTDLEKLESQI 181 (283)
Q Consensus 156 ~~d~i~~~D~D~~-~~~~~l~~~~~~~ 181 (283)
..++++++++|.. ++++.++++++.+
T Consensus 92 ~~~~vlv~~~D~P~~~~~~i~~l~~~~ 118 (223)
T 2xwl_A 92 DAEFVLVHDAARALTPPALIARVVAAL 118 (223)
T ss_dssp TCSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred CCCEEEEEcCCcccCCHHHHHHHHHHH
Confidence 7799999999994 5889999999988
No 58
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=88.18 E-value=2.1 Score=35.77 Aligned_cols=99 Identities=12% Similarity=0.151 Sum_probs=60.2
Q ss_pred EEeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHH---cCCCcEEEEEcCCCCCHHHH
Q 023346 71 IIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRK---YTVDNVRIILLGRNHGKGEA 147 (283)
Q Consensus 71 iip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~---~~~~~~~~~~~~~~~gk~~a 147 (283)
++|.++ .+.|...|+.+.. ..--+|+||-.... .+.++++... +. .++.++..+...|.+.+
T Consensus 28 llpi~g-kpli~~~l~~l~~----------~gi~~Iivv~~~~~---~~~i~~~l~~g~~~g-~~i~~~~~~~~~G~~~a 92 (295)
T 1lvw_A 28 LLPIYD-KPMIYYPLSVLML----------AGIRDILIISTPRD---LPLYRDLLGDGSQFG-VRFSYRVQEEPRGIADA 92 (295)
T ss_dssp GSEETT-EETTHHHHHHHHH----------TTCCEEEEEECTTT---HHHHHHHHTTSGGGT-SEEEEEECSSCCCGGGH
T ss_pred ecEECC-eeHHHHHHHHHHH----------CCCCeEEEEeccch---HHHHHHHhhhccccC-ceEEEeeCCCCCChHHH
Confidence 345566 4777777777765 11347877753221 1223333322 22 24666666666788888
Q ss_pred HHHHHHHcCC-CEEEEEeCCCCCChhhHHHHHHHHHHcC
Q 023346 148 IRKGMLHSRG-ELLLMLDADGATKVTDLEKLESQIHAVG 185 (283)
Q Consensus 148 ~n~g~~~a~~-d~i~~~D~D~~~~~~~l~~~~~~~~~~~ 185 (283)
+-.|++.... +++++. +|..+....+.++++.+.+..
T Consensus 93 l~~a~~~i~~~~~~lv~-gD~~~~~~~l~~~l~~~~~~~ 130 (295)
T 1lvw_A 93 FIVGKDFIGDSKVALVL-GDNVFYGHRFSEILRRAASLE 130 (295)
T ss_dssp HHHTHHHHTTSCEEEEE-TTCCEECTTHHHHHHHHHTCC
T ss_pred HHHHHHHhCCCcEEEEE-CCccccCcCHHHHHHHHHHcC
Confidence 8888877654 555555 998875467888888876443
No 59
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=87.76 E-value=0.98 Score=37.79 Aligned_cols=55 Identities=15% Similarity=0.151 Sum_probs=44.1
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHcCCCEEEEEeCCCCCC----hh---hHHHHHHHHHHcCC
Q 023346 132 NVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATK----VT---DLEKLESQIHAVGR 186 (283)
Q Consensus 132 ~~~~~~~~~~~gk~~a~n~g~~~a~~d~i~~~D~D~~~~----~~---~l~~~~~~~~~~~~ 186 (283)
.+.++..+...|.+.++-.|+.....+.++++.+|..+. +. .++++++.+.+...
T Consensus 103 ~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~~~ 164 (302)
T 2e3d_A 103 TIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGH 164 (302)
T ss_dssp EEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHHCC
T ss_pred ceEEeeCCccCCHHHHHHHHHHHcCCCcEEEEcCCccccCccccchHHHHHHHHHHHHhcCC
Confidence 466666666789999999998887668899999999986 45 79999998866544
No 60
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=85.47 E-value=1.4 Score=38.26 Aligned_cols=50 Identities=12% Similarity=0.231 Sum_probs=39.8
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCEEEEEeCCCC-CChhhHHHHHHHHHHc
Q 023346 133 VRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGA-TKVTDLEKLESQIHAV 184 (283)
Q Consensus 133 ~~~~~~~~~~gk~~a~n~g~~~a~~d~i~~~D~D~~-~~~~~l~~~~~~~~~~ 184 (283)
++++. ...|...++..|++....++++++++|.. ++++.++++++.+.+.
T Consensus 67 v~~v~--~g~g~~~sv~~aL~~l~~d~vlv~~~D~Pli~~~~i~~li~~~~~~ 117 (371)
T 1w55_A 67 YEFIE--GGDTRAESLKKALELIDSEFVMVSDVARVLVSKNLFDRLIENLDKA 117 (371)
T ss_dssp SEEEE--CCSSHHHHHHHHHTTCCSSEEEEEETTCTTCCHHHHHHHHTTGGGC
T ss_pred CEEEe--CCCChHHHHHHHHHhcCCCeEEEEeCCcccCCHHHHHHHHHHHHhc
Confidence 45553 24678888899998887899999999985 5899999999877654
No 61
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=84.46 E-value=3.2 Score=33.13 Aligned_cols=77 Identities=9% Similarity=0.055 Sum_probs=54.1
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHHc
Q 023346 76 NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHS 155 (283)
Q Consensus 76 ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~gk~~a~n~g~~~a 155 (283)
+....+...++.+.+ ... +|+|+-+. +...+ +. ++++ +...|.+.++..|++..
T Consensus 30 ~g~pll~~~l~~l~~----------~~~-~ivvv~~~--~~i~~----~~------~~~~---~~~~g~~~~i~~a~~~~ 83 (232)
T 2dpw_A 30 RGRPMVEWVLEALYA----------AGL-SPVYVGEN--PGLVP----AP------ALTL---PDRGGLLENLEQALEHV 83 (232)
T ss_dssp TTEETHHHHHHHHHH----------TTC-EEEEESCC--SSCSS----CC------SEEE---CCCSSHHHHHHHHHHTC
T ss_pred CCEEHHHHHHHHHHh----------cCC-EEEEEeCh--HHHhh----hc------CeEe---cCCCCHHHHHHHHHHHc
Confidence 455677777777765 223 88887332 22111 11 3554 45679999999999888
Q ss_pred CCCEEEEEeCCCC-CChhhHHHHHH
Q 023346 156 RGELLLMLDADGA-TKVTDLEKLES 179 (283)
Q Consensus 156 ~~d~i~~~D~D~~-~~~~~l~~~~~ 179 (283)
. +.++++++|.. +.++.++++++
T Consensus 84 ~-~~~lv~~~D~P~~~~~~i~~l~~ 107 (232)
T 2dpw_A 84 E-GRVLVATGDIPHLTEEAVRFVLD 107 (232)
T ss_dssp C-SEEEEEETTCTTCCHHHHHHHHH
T ss_pred C-CCEEEEeCCcccCCHHHHHHHHh
Confidence 7 99999999996 58999999998
No 62
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=83.94 E-value=2.5 Score=35.78 Aligned_cols=54 Identities=11% Similarity=0.125 Sum_probs=42.2
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHcCC--CEEEEEeCCCCCC-hhhHHHHHHHHHHcC
Q 023346 132 NVRIILLGRNHGKGEAIRKGMLHSRG--ELLLMLDADGATK-VTDLEKLESQIHAVG 185 (283)
Q Consensus 132 ~~~~~~~~~~~gk~~a~n~g~~~a~~--d~i~~~D~D~~~~-~~~l~~~~~~~~~~~ 185 (283)
.+.++..+...|.+.++..|+..... +.++++.+|..+. +..+.++++.+.+..
T Consensus 106 ~i~~~~~~~~~Gt~~al~~a~~~l~~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~~ 162 (323)
T 2pa4_A 106 KAVPVTQDKPLGLGHAVGLAESVLDDDEDVVAVMLPDDLVLPTGVMERMAQVRAEFG 162 (323)
T ss_dssp EEEEEECSSCCCHHHHHHTTGGGSCSSCCEEEEECTTEEEESSCHHHHHHHHHHTTC
T ss_pred ceEEEeCCccCCcHHHHHHHHHHhcCCCCeEEEEeCCcccCchHHHHHHHHHHHhcC
Confidence 46667666678999999988877643 4588999999986 588999998886544
No 63
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=83.13 E-value=7.2 Score=30.80 Aligned_cols=93 Identities=11% Similarity=0.071 Sum_probs=56.1
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHHc
Q 023346 76 NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHS 155 (283)
Q Consensus 76 ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~gk~~a~n~g~~~a 155 (283)
+....|..+++.+.+ ...--+|+|+-+... .+.++++.. +. .++.... ...+...++-.|++.+
T Consensus 39 ~Gkpli~~~i~~l~~---------~~~~~~ivVv~~~~~---~~~~~~~~~-~~-~~~~~~~--gg~~~~~sv~~al~~~ 102 (234)
T 1vpa_A 39 EGRMLFEYPLSTFLK---------SEAIDGVVIVTRREW---FEVVEKRVF-HE-KVLGIVE--GGDTRSQSVRSALEFL 102 (234)
T ss_dssp TTEETTHHHHHHHHH---------CTTCSEEEEEECGGG---HHHHHTTCC-CT-TEEEEEE--CCSSHHHHHHHHHHHH
T ss_pred CCeEHHHHHHHHHHc---------CCCCCeEEEEEChHH---HHHHHHHhc-cC-CceEEeC--CCCcHHHHHHHHHHHh
Confidence 455677777777765 111347888765321 222222221 11 1232221 1233677777788765
Q ss_pred ---CCCEEEEEeCCC-CCChhhHHHHHHHHHHc
Q 023346 156 ---RGELLLMLDADG-ATKVTDLEKLESQIHAV 184 (283)
Q Consensus 156 ---~~d~i~~~D~D~-~~~~~~l~~~~~~~~~~ 184 (283)
..++++++++|. .++++.++++++.+...
T Consensus 103 ~~~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~ 135 (234)
T 1vpa_A 103 EKFSPSYVLVHDSARPFLRKKHVSEVLRRARET 135 (234)
T ss_dssp GGGCCSEEEEEETTSCCCCHHHHHHHHHHHHHH
T ss_pred hhcCCCEEEEecCcccCCCHHHHHHHHHHHHhc
Confidence 368999999998 56899999999988664
No 64
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=80.74 E-value=1.6 Score=36.60 Aligned_cols=96 Identities=16% Similarity=0.125 Sum_probs=57.4
Q ss_pred EeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHH---cCCCcEEEEEcCCCCCHHHHH
Q 023346 72 IPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRK---YTVDNVRIILLGRNHGKGEAI 148 (283)
Q Consensus 72 ip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~---~~~~~~~~~~~~~~~gk~~a~ 148 (283)
+|.++ .+.|...++.+.. ..--+|+||-.... .+.++++... +. .++.++..+...|.+.++
T Consensus 29 lpi~g-kpli~~~l~~l~~----------~gi~~I~vv~~~~~---~~~i~~~l~~g~~~g-~~i~~~~~~~~~G~~~al 93 (296)
T 1mc3_A 29 LPIYD-KPMIYYPLSVLML----------AGIREILIITTPED---KGYFQRLLGDGSEFG-IQLEYAEQPSPDGLAQAF 93 (296)
T ss_dssp SEETT-EETTHHHHHHHHH----------TTCCEEEEEECTTT---HHHHHHHHTTSGGGT-CEEEEEECSSCCCSTHHH
T ss_pred eEECC-eeHHHHHHHHHHh----------CCCCcEEEEechhH---HHHHHHHHhcccccC-ceEEEeccCCCCCHHHHH
Confidence 45555 4677777777765 11347887753222 1223333322 22 245666666667888888
Q ss_pred HHHHHHcCC-CEEEEEeCCCCCChhhHHHHHHHHHH
Q 023346 149 RKGMLHSRG-ELLLMLDADGATKVTDLEKLESQIHA 183 (283)
Q Consensus 149 n~g~~~a~~-d~i~~~D~D~~~~~~~l~~~~~~~~~ 183 (283)
-.|++.... ++++++ +|..+....+.++++.+.+
T Consensus 94 ~~a~~~i~~~~~~lv~-gD~~~~~~~l~~~l~~~~~ 128 (296)
T 1mc3_A 94 IIGETFLNGEPSCLVL-GDNIFFGQGFSPKLRHVAA 128 (296)
T ss_dssp HHTHHHHTTSCEEEEE-TTEEEECSSCHHHHHHHTT
T ss_pred HHHHHHhCCCCEEEEE-CCccccccCHHHHHHHHHH
Confidence 888877654 455555 9987654677888877644
No 65
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=78.94 E-value=7.8 Score=31.92 Aligned_cols=105 Identities=12% Similarity=-0.021 Sum_probs=60.5
Q ss_pred ceEEEEEeec-CCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCCC--
Q 023346 66 KYISLIIPAF-NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNH-- 142 (283)
Q Consensus 66 p~vsviip~~-ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~-- 142 (283)
+.+.|++.+= |-...+..++.|++.. .+..++.+.|+.++-+++..+.++++...+. ..++++..+...
T Consensus 4 m~i~I~~~~d~~Y~~~~~v~i~Sl~~~-------~~~~~~~~~il~~~is~~~~~~L~~~~~~~~-~~i~~~~~~~~~~~ 75 (276)
T 3tzt_A 4 MADALLLTLDENYIPQMKVLMTSIYIN-------NPGRIFDVYLIHSRISEDKLKDLGEDLKKFS-YTLYPIRATDDLFS 75 (276)
T ss_dssp -CEEEEEECCGGGHHHHHHHHHHHHHH-------STTCCEEEEEEESCCCHHHHHHHHHHHHTTT-CEEEEEECC-----
T ss_pred eeEEEEEEeCHhHHHHHHHHHHHHHHh-------CCCCceEEEEEeCCCCHHHHHHHHHHHHHcC-CEEEEEEeCHHHHh
Confidence 3467776552 2244555566666651 2235789999999888888888888776543 356666654321
Q ss_pred CH---------HHHHHHHHHHc--CCCEEEEEeCCCCCChhhHHHHHH
Q 023346 143 GK---------GEAIRKGMLHS--RGELLLMLDADGATKVTDLEKLES 179 (283)
Q Consensus 143 gk---------~~a~n~g~~~a--~~d~i~~~D~D~~~~~~~l~~~~~ 179 (283)
+. ...+-..-+.. ..+-++++|+|..+.. .+.++.+
T Consensus 76 ~~~~~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~-di~~L~~ 122 (276)
T 3tzt_A 76 FAKVTDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVIN-PLDDLLR 122 (276)
T ss_dssp --------CHHHHHHHTHHHHSCTTCCEEEEECSSEEECS-CSHHHHT
T ss_pred cCccccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecC-CHHHHhh
Confidence 10 01111111222 3689999999998864 3444443
No 66
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=78.45 E-value=4.1 Score=32.30 Aligned_cols=70 Identities=17% Similarity=0.177 Sum_probs=45.7
Q ss_pred eEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCC-CCHHHHHHHHHHHcCCCEEEEEeCCCCCChhhHHHHHH
Q 023346 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRN-HGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLES 179 (283)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~-~gk~~a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~~~~ 179 (283)
-+|+|+- ...+ ++.+.+..++. .+++++.++.. .|.+.++..|++....+ ++++.+|..++++.++++++
T Consensus 60 ~~i~vv~-~~~~---~~~~~~~~~~~-~~~~~v~~~~~~~g~~~~i~~a~~~~~~~-~lv~~~D~p~~~~~~~~l~~ 130 (232)
T 2xme_A 60 SEFIIVA-SRYA---DDIDAFLKDKG-FNYKIVRHDRPEKGNGYSLLVAKNHVEDR-FILTMGDHVYSQQFIEKAVR 130 (232)
T ss_dssp EEEEEEE-STTH---HHHHHHHTTSC-CCEEEEECSCGGGCHHHHHHTTGGGCCSS-EEEEETTEEECHHHHHHHTT
T ss_pred CEEEEEe-CChH---HHHHHHHHhcC-CcEEEEECCCCCCCcHHHHHHHHHHCCCC-EEEEcCCcccCHHHHHHHHh
Confidence 4777776 3322 22222233322 25788876543 68899999999887744 56788998888888887765
No 67
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=76.70 E-value=4.8 Score=35.27 Aligned_cols=100 Identities=16% Similarity=0.124 Sum_probs=58.8
Q ss_pred eecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCC------CcEEEEEcCC----C-
Q 023346 73 PAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTV------DNVRIILLGR----N- 141 (283)
Q Consensus 73 p~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~------~~~~~~~~~~----~- 141 (283)
|..+....|..+|+.+.+ ..--+|+|+-+...+...+.+.+ .+.. ..+.++.... .
T Consensus 39 pi~gk~pli~~~l~~l~~----------~gi~~i~vv~~~~~~~i~~~~~~---~~~~~~~~~~~~v~i~~~~~~~~~~~ 105 (420)
T 3brk_X 39 YFGGKARIIDFALSNALN----------SGIRRIGVATQYKAHSLIRHLQR---GWDFFRPERNESFDILPASQRVSETQ 105 (420)
T ss_dssp EETTTEETHHHHHHHHHH----------TTCCEEEEEECTTCHHHHHHHHH---HSCCCCGGGTCEEEEECCC-------
T ss_pred ccCCCCcHHHHHHHHHHh----------CCCCeEEEEeCCChHHHHHHHhh---hhccccccccCCEEEeCccccccCCc
Confidence 343433566667777665 12347877766443333333322 1220 1355554221 2
Q ss_pred --CCHHHHHHHHHHHcC---CCEEEEEeCCCCCChhhHHHHHHHHHHcCC
Q 023346 142 --HGKGEAIRKGMLHSR---GELLLMLDADGATKVTDLEKLESQIHAVGR 186 (283)
Q Consensus 142 --~gk~~a~n~g~~~a~---~d~i~~~D~D~~~~~~~l~~~~~~~~~~~~ 186 (283)
.|.+.++..|+.... .+.++++.+|... +..+.++++.+.+...
T Consensus 106 ~~~Gt~~al~~a~~~l~~~~~~~~lv~~~D~~~-~~~l~~l~~~~~~~~~ 154 (420)
T 3brk_X 106 WYEGTADAVYQNIDIIEPYAPEYMVILAGDHIY-KMDYEYMLQQHVDSGA 154 (420)
T ss_dssp CCCCHHHHHHTTHHHHHHHCCSEEEEEESSCEE-CBCTHHHHHHHHHTTC
T ss_pred cccCCHHHHHHHHHHHHhcCCCEEEEecccEEE-chHHHHHHHHHHHcCC
Confidence 688888888887653 4899999999954 4558888888766543
No 68
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=76.53 E-value=9.2 Score=33.33 Aligned_cols=103 Identities=10% Similarity=0.002 Sum_probs=57.6
Q ss_pred CceEEEEEeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcC--CC-
Q 023346 65 EKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG--RN- 141 (283)
Q Consensus 65 ~p~vsviip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~--~~- 141 (283)
.+++..+|.+|+.. +.++.+++.++ .....=.|-+|-.+++...+.+.+....++ ++.++... ..
T Consensus 83 ~~kiAflil~h~d~----~~l~rll~~ly------~p~n~y~IHvD~ks~~~~~~~~~~~~~~f~--NV~v~~~~~~v~W 150 (391)
T 2gak_A 83 GFPIAYSIVVHHKI----EMLDRLLRAIY------MPQNFYCIHVDRKAEESFLAAVQGIASCFD--NVFVASQLESVVY 150 (391)
T ss_dssp TSCEEEEEEECSCH----HHHHHHHHHHC------CTTSEEEEEECTTSCHHHHHHHHHHHHTCT--TEEECSSCCCCCT
T ss_pred CCCEEEEEEecCCH----HHHHHHHHHHh------CCCCeEEEEEeCCCCHHHHHHHHHHHhcCC--CEEEeccCccccc
Confidence 46799999999865 34455555433 122333455666666555555554445566 89887432 22
Q ss_pred CCHH--H----HHHHHHHHc-CCCEEEEEeCCCCC--ChhhHHHHHH
Q 023346 142 HGKG--E----AIRKGMLHS-RGELLLMLDADGAT--KVTDLEKLES 179 (283)
Q Consensus 142 ~gk~--~----a~n~g~~~a-~~d~i~~~D~D~~~--~~~~l~~~~~ 179 (283)
+|.+ . ++..+++.. .-+|++.+-+.|.+ ..+.|.+.+.
T Consensus 151 Gg~S~v~A~l~ll~~aL~~~~~w~yfilLSgsD~PLkt~~~i~~~l~ 197 (391)
T 2gak_A 151 ASWTRVKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLK 197 (391)
T ss_dssp TSHHHHHHHHHHHHHHHHHCSCCCEEEEEETTCEESSCHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHhcCCCCCEEEEecCCCccccCHHHHHHHHH
Confidence 3322 2 223344333 57898888887777 3444444443
No 69
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=75.89 E-value=18 Score=31.76 Aligned_cols=103 Identities=16% Similarity=0.113 Sum_probs=60.3
Q ss_pred eecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHH-Hc----CCCcEEEEEc---CC----
Q 023346 73 PAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVR-KY----TVDNVRIILL---GR---- 140 (283)
Q Consensus 73 p~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~-~~----~~~~~~~~~~---~~---- 140 (283)
|..+....|...|+.+.+ ..--+|+|+-....+...+.+.+... .. ....++++.. +.
T Consensus 47 pi~g~~pli~~~l~~l~~----------~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~ 116 (451)
T 1yp2_A 47 PLGANYRLIDIPVSNCLN----------SNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPDW 116 (451)
T ss_dssp EETTTEETTHHHHHHHHH----------TTCCEEEEEESCCCHHHHHHHHHHCC--------CCEEEEEESCSSTTSCCC
T ss_pred EECCcceeHHHHHHHHHH----------CCCCEEEEEeccCHHHHHHHHhhhhhcccccccccCcEEEeccccccccccc
Confidence 444443667777777665 12347887776444433333322100 00 0012555532 11
Q ss_pred CCCHHHHHHHHHHHcC---CCEEEEEeCCCCCChhhHHHHHHHHHHcCC
Q 023346 141 NHGKGEAIRKGMLHSR---GELLLMLDADGATKVTDLEKLESQIHAVGR 186 (283)
Q Consensus 141 ~~gk~~a~n~g~~~a~---~d~i~~~D~D~~~~~~~l~~~~~~~~~~~~ 186 (283)
..|.+.++-.++.... .+.++++.+|...+ ..+.++++.+.+.+.
T Consensus 117 ~~Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~~-~~l~~l~~~~~~~~~ 164 (451)
T 1yp2_A 117 FQGTADAVRQYLWLFEEHTVLEYLILAGDHLYR-MDYEKFIQAHRETDA 164 (451)
T ss_dssp CCSHHHHHHHTHHHHTTSCCSEEEEECSCEECC-CCHHHHHHHHHHTTC
T ss_pred ccCcHHHHHHHHHHHHhcCCCeEEEecCcEEEc-CCHHHHHHHHHHcCC
Confidence 3688899988887764 58999999999655 458888888766543
No 70
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=75.11 E-value=8.9 Score=32.56 Aligned_cols=95 Identities=14% Similarity=0.123 Sum_probs=54.0
Q ss_pred EeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHH
Q 023346 72 IPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKG 151 (283)
Q Consensus 72 ip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~gk~~a~n~g 151 (283)
+|..++...|..+++.+.. ...--+|+|+-+. .-.+.+++.....+ ...++..+...|.+.++-.+
T Consensus 28 l~l~g~~pli~~~l~~l~~---------~~~~~~iivvt~~---~~~~~i~~~l~~~~--~~~ii~e~~~~gta~ai~~a 93 (336)
T 2x65_A 28 LKLFGNKSLMRWTFERVLE---------EMDPKDVIVVTHK---DYVERTKKELPELP--DENIIAEPMKKNTAPACFIG 93 (336)
T ss_dssp CCCBTTBCHHHHHHHHHHT---------TCCGGGEEEEEEG---GGHHHHHHHCTTSC--GGGEEEESSCCCHHHHHHHH
T ss_pred EECCCCCcHHHHHHHHHhc---------cCCCCcEEEEcCh---HHHHHHHHHhhccc--cceEEeCCCCCCcHHHHHHH
Confidence 4555656666666666554 1122356666542 11233333222222 22345566677888888777
Q ss_pred HHHcC-CCEEEEEeCCCCC-ChhhHHHHHHH
Q 023346 152 MLHSR-GELLLMLDADGAT-KVTDLEKLESQ 180 (283)
Q Consensus 152 ~~~a~-~d~i~~~D~D~~~-~~~~l~~~~~~ 180 (283)
..... .++++++.+|..+ .++.+.++++.
T Consensus 94 ~~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~ 124 (336)
T 2x65_A 94 TKLADDDEPVLVLPADHRIPDTKKFWKTVKK 124 (336)
T ss_dssp HTTSCTTCEEEEEETTCBCCCHHHHHHHHHH
T ss_pred HHhhCCCCEEEEEcCCceeccHHHHHHHHHH
Confidence 76543 5789999999987 45565555544
No 71
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=73.08 E-value=21 Score=28.52 Aligned_cols=47 Identities=19% Similarity=0.224 Sum_probs=35.0
Q ss_pred CCCCCHHHHHHHHHHHc-CCCEEEEEeCCCCCChhhHHHHHHHHHHcCC
Q 023346 139 GRNHGKGEAIRKGMLHS-RGELLLMLDADGATKVTDLEKLESQIHAVGR 186 (283)
Q Consensus 139 ~~~~gk~~a~n~g~~~a-~~d~i~~~D~D~~~~~~~l~~~~~~~~~~~~ 186 (283)
+...|.+.++..+.... ..+.++++.+|... +..+.++++.+.+...
T Consensus 103 ~~~~gt~~al~~a~~~~~~~~~~lv~~~D~~~-~~~~~~~~~~~~~~~~ 150 (259)
T 1tzf_A 103 GDSSMTGGRLKRVAEYVKDDEAFLFTYGDGVA-DLDIKATIDFHKAHGK 150 (259)
T ss_dssp CSSCCHHHHHHHTGGGTTTSSCEEEEETTEEE-CCCHHHHHHHHHHHCC
T ss_pred ccccCcHHHHHHHHHhcCCCCcEEEEECCEec-ccCHHHHHHHHHHhCC
Confidence 34578888888888776 45778889999854 5678888888765443
No 72
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=64.58 E-value=6.1 Score=33.15 Aligned_cols=79 Identities=19% Similarity=0.120 Sum_probs=48.3
Q ss_pred CCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCC--------CC----HHHHHHHHHHH-cCCCEEEEEeC
Q 023346 99 DKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRN--------HG----KGEAIRKGMLH-SRGELLLMLDA 165 (283)
Q Consensus 99 ~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~--------~g----k~~a~n~g~~~-a~~d~i~~~D~ 165 (283)
.+..++.++|++|+-+++..+.++++...+. ..++++..+.. .+ ....+-...+. ...+-|+++|+
T Consensus 26 ~~~~~~~f~il~~~ls~~~~~~L~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~l~~ll~~~~kvlyLD~ 104 (311)
T 1g9r_A 26 HPDTEIRFHVLDAGISEANRAAVAANLRGGG-GNIRFIDVNPEDFAGFPLNIRHISITTYARLKLGEYIADCDKVLYLDI 104 (311)
T ss_dssp CTTSCCEEEEEESSCCHHHHHHHHHHSGGGT-TTEEEEECCGGGGTTSCCCCTTCCGGGGGGGGHHHHCCSCSCEEEECS
T ss_pred cCCCCceEEEEECCCCHHHHHHHHHHHHHcC-CEEEEEEcCHHHHhcCccccccCCHHHHHHHHHHHHhhhcCEEEEEcC
Confidence 3455789999999888888888888766543 35676654311 11 11111112222 25689999999
Q ss_pred CCCCChhhHHHHHH
Q 023346 166 DGATKVTDLEKLES 179 (283)
Q Consensus 166 D~~~~~~~l~~~~~ 179 (283)
|..+..+ ++++.+
T Consensus 105 D~iv~~d-i~eL~~ 117 (311)
T 1g9r_A 105 DVLVRDS-LTPLWD 117 (311)
T ss_dssp SEEECSC-CHHHHT
T ss_pred CeEeccC-HHHHhc
Confidence 9998654 444443
No 73
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=63.34 E-value=15 Score=29.19 Aligned_cols=52 Identities=8% Similarity=0.035 Sum_probs=41.2
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHcCCCEEEEEeCCC-CCChhhHHHHHHHHHHcC
Q 023346 132 NVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADG-ATKVTDLEKLESQIHAVG 185 (283)
Q Consensus 132 ~~~~~~~~~~~gk~~a~n~g~~~a~~d~i~~~D~D~-~~~~~~l~~~~~~~~~~~ 185 (283)
.+.++.. ..|...++..|++....++++++++|. .++++.++++++.+.+.+
T Consensus 83 ~v~~~~~--~~~~~~~i~~al~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~ 135 (236)
T 2px7_A 83 GAVFLEG--GATRQASVARLLEAASLPLVLVHDVARPFVSRGLVARVLEAAQRSG 135 (236)
T ss_dssp SCEEEEC--CSSHHHHHHHHHHHCCSSEEEECCTTCCCCCHHHHHHHHHHHHHHS
T ss_pred CcEEEeC--CCchHHHHHHHHHHcCCCeEEEecCccccCCHHHHHHHHHHHHhcC
Confidence 4555543 346888888899888889999999997 558999999999887653
No 74
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=62.73 E-value=24 Score=27.32 Aligned_cols=45 Identities=20% Similarity=0.284 Sum_probs=38.1
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHcCCCEEEEEeCCCCC-ChhhHHHHHH
Q 023346 132 NVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGAT-KVTDLEKLES 179 (283)
Q Consensus 132 ~~~~~~~~~~~gk~~a~n~g~~~a~~d~i~~~D~D~~~-~~~~l~~~~~ 179 (283)
+++++.++ .|.+.++..|++.. .+.++++-+|.-. .++.++++++
T Consensus 66 ~~~~v~~~--~gl~~sl~~a~~~~-~~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 66 EARVLLDE--KDLNEALNRYLKEA-EEPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp SSEEEECC--SCHHHHHHHHHHHC-CSCEEEECSCCTTCCHHHHHHHTT
T ss_pred CCEEEECC--CCHHHHHHHHHHhc-CCCEEEEcCCcCCCCHHHHHHHHc
Confidence 46777766 88999999999887 6889999999876 8999998876
No 75
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=58.88 E-value=54 Score=26.20 Aligned_cols=50 Identities=10% Similarity=0.145 Sum_probs=39.2
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHc---CCCEEEEEeCCCCC-ChhhHHHHHHHHHH
Q 023346 133 VRIILLGRNHGKGEAIRKGMLHS---RGELLLMLDADGAT-KVTDLEKLESQIHA 183 (283)
Q Consensus 133 ~~~~~~~~~~gk~~a~n~g~~~a---~~d~i~~~D~D~~~-~~~~l~~~~~~~~~ 183 (283)
+.+... ...|.+..++.|++.+ ..+-++++-+|.-. .++.|.++++.+..
T Consensus 77 ~~~~~q-~~~gLg~rl~~a~~~~~~~~~~~vliigaD~P~L~~~~l~~a~~~l~~ 130 (242)
T 3cgx_A 77 HMFAAQ-QGLDLGERMKHAMQKAFDDGYDRVVLMGSDIPDYPCELVQKALNDLQH 130 (242)
T ss_dssp SEEEEC-CSSSHHHHHHHHHHHHHHTTCSEEEEECSSCTTCCHHHHHHHHHHTTT
T ss_pred cEEecC-CCCCHHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCHHHHHHHHHHhcc
Confidence 444444 3678999999999876 45789999999877 89999999887754
No 76
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=48.54 E-value=92 Score=24.45 Aligned_cols=68 Identities=7% Similarity=0.041 Sum_probs=40.2
Q ss_pred ceEEEEEeCCCCc-chHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHHcCCCEEEEEeCCCCCChhhHHHH
Q 023346 103 TYEVLIIDDGSSD-GTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL 177 (283)
Q Consensus 103 ~~eiivvdd~s~d-~t~~~~~~~~~~~~~~~~~~~~~~~~~gk~~a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~~ 177 (283)
+.||..|--...| ...+. +++. ++.+...+...-+..++-..++..+-|+++..----.++++.|+..
T Consensus 35 ~~~I~~Vis~~~~a~~l~~----A~~~---gIp~~~~~~~~~~~~~~~~~L~~~~~Dlivlagy~~IL~~~~l~~~ 103 (215)
T 3kcq_A 35 SVVISCVISNNAEARGLLI----AQSY---GIPTFVVKRKPLDIEHISTVLREHDVDLVCLAGFMSILPEKFVTDW 103 (215)
T ss_dssp SEEEEEEEESCTTCTHHHH----HHHT---TCCEEECCBTTBCHHHHHHHHHHTTCSEEEESSCCSCCCHHHHHHT
T ss_pred CcEEEEEEeCCcchHHHHH----HHHc---CCCEEEeCcccCChHHHHHHHHHhCCCEEEEeCCceEeCHHHHhhc
Confidence 4777755432222 23333 3333 3545543322112356667788888999999888888888887653
No 77
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=45.63 E-value=40 Score=26.97 Aligned_cols=65 Identities=14% Similarity=0.108 Sum_probs=38.8
Q ss_pred eEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCC--CCCHHHHHHHHHHHcCCCEEEEEeCCCCCChhhHHHH
Q 023346 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGR--NHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL 177 (283)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~--~~gk~~a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~~ 177 (283)
-+|+||-+...+...+.. ..+ +++++..+. ..|.+.++..+++... + ++++.+|..+..+.+.++
T Consensus 72 ~~i~vv~~~~~~~i~~~~----~~~---~~~iv~~~~~~~~g~~~al~~a~~~~~-~-~lv~~~D~~~~~~~~~~~ 138 (254)
T 1jyk_A 72 NDIIIIVGYLKEQFDYLK----EKY---GVRLVFNDKYADYNNFYSLYLVKEELA-N-SYVIDADNYLFKNMFRND 138 (254)
T ss_dssp CCEEEEECTTGGGGTHHH----HHH---CCEEEECTTTTTSCTHHHHHTTGGGCT-T-EEEEETTEEESSCCCCSC
T ss_pred CeEEEEeCCcHHHHHHHH----HhC---CcEEEECCCccCCCcHHHHHHHHHHCC-C-EEEEeCCcccCHHHHHHH
Confidence 366776654333333333 223 366777653 3577777777776653 4 568999988766665443
No 78
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=44.90 E-value=69 Score=25.63 Aligned_cols=72 Identities=13% Similarity=0.086 Sum_probs=43.1
Q ss_pred eEEEEEeCCCCcchHHHHHHHHHHcCCCcE-EEEEcCCCCCHHHHHHHHHHHc------CCCEEEEEeCCCCCChhhHHH
Q 023346 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNV-RIILLGRNHGKGEAIRKGMLHS------RGELLLMLDADGATKVTDLEK 176 (283)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~~-~~~~~~~~~gk~~a~n~g~~~a------~~d~i~~~D~D~~~~~~~l~~ 176 (283)
-+|+||-....+ ..+.+++...+.....+ .++..+...|-+.|+-.|+... ..+-++++.+|..+.+..+.+
T Consensus 47 ~~iivv~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~av~~a~~~l~~~~~~~~~~~lV~~gD~l~~~~~~~~ 125 (255)
T 4evw_A 47 TPFLFIVRNVYD-TAVFVREKATQLGIKQFYIAELHTETRGQAETVTLGLEELAKQGVDYQGSITVFNIDTFRPNFVFPD 125 (255)
T ss_dssp SCEEEEEESSTT-HHHHHHHHHHHHTCSSEEEEEESSCCSSHHHHHHHHHHHHHHTTCCCCSCEEECCTTEECTTCCCCG
T ss_pred ceEEEEECchhh-hHHHHHHHHHHcCCCCceEEEeCCCCCCHHHHHHHHHHHHhhcccCCCCcEEEEeCCEEEecchhHH
Confidence 366665543333 44555544333321133 3344455789999999998876 356688899999775444433
No 79
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=39.47 E-value=79 Score=25.66 Aligned_cols=76 Identities=14% Similarity=0.140 Sum_probs=44.1
Q ss_pred EEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHHcCCCEEEEEeCCC-CCChhhHHHHHHHHHH
Q 023346 105 EVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADG-ATKVTDLEKLESQIHA 183 (283)
Q Consensus 105 eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~gk~~a~n~g~~~a~~d~i~~~D~D~-~~~~~~l~~~~~~~~~ 183 (283)
++++|++.........+.+..++.+ ..+.++....-.. ......+.|.|++.|... .+.++.++.+.+..++
T Consensus 6 ~vLiV~g~~~~~~a~~l~~aL~~~g-~~V~~i~~~~~~~------~~~~L~~yDvIIl~d~~~~~l~~~~~~~L~~yV~~ 78 (259)
T 3rht_A 6 RVLYCGDTSLETAAGYLAGLMTSWQ-WEFDYIPSHVGLD------VGELLAKQDLVILSDYPAERMTAQAIDQLVTMVKA 78 (259)
T ss_dssp CEEEEESSCTTTTHHHHHHHHHHTT-CCCEEECTTSCBC------SSHHHHTCSEEEEESCCGGGBCHHHHHHHHHHHHT
T ss_pred eEEEECCCCchhHHHHHHHHHHhCC-ceEEEeccccccc------ChhHHhcCCEEEEcCCccccCCHHHHHHHHHHHHh
Confidence 5777764433334444444434333 3566665442211 112456889999988664 4678888888888876
Q ss_pred cCCc
Q 023346 184 VGRK 187 (283)
Q Consensus 184 ~~~~ 187 (283)
+...
T Consensus 79 GGgL 82 (259)
T 3rht_A 79 GCGL 82 (259)
T ss_dssp TCEE
T ss_pred CCeE
Confidence 4443
No 80
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=35.34 E-value=1.2e+02 Score=22.35 Aligned_cols=59 Identities=8% Similarity=0.015 Sum_probs=26.0
Q ss_pred EEeCCCC--cchHHHHHHHHHHcCCCcEEEEEcCCC---CCHHHHHHHHHHHcCCCEEEEEeCC
Q 023346 108 IIDDGSS--DGTKRVAFDFVRKYTVDNVRIILLGRN---HGKGEAIRKGMLHSRGELLLMLDAD 166 (283)
Q Consensus 108 vvdd~s~--d~t~~~~~~~~~~~~~~~~~~~~~~~~---~gk~~a~n~g~~~a~~d~i~~~D~D 166 (283)
|+||... +.....++.+...++..++.++-.+.. .++...-..+-.....|.+++++++
T Consensus 39 vi~DyaHnP~si~a~l~al~~~~~~~riivvf~~g~~s~r~k~~~~~~~~~~~~aD~vi~~~~~ 102 (163)
T 3mvn_A 39 VYDDFAHHPTAITATIDALRAKVGQQRILAVLEPRSNTMKMGVHKHELATSLQDADSVFIYQPP 102 (163)
T ss_dssp EEEECCCSHHHHHHHHHHHHHHHTTSCEEEEECCC---------CHHHHHHHTTCSEEEEECC-
T ss_pred EEEcCCCCHHHHHHHHHHHHHhcCCCcEEEEECCCCcchhhHHHHHHHHHHHhcCCEEEEECCC
Confidence 6777632 333445555544344346766654321 1222111112222347888888754
No 81
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=34.22 E-value=83 Score=26.48 Aligned_cols=18 Identities=17% Similarity=0.183 Sum_probs=14.5
Q ss_pred cCCCEEEEEeCCCCCChh
Q 023346 155 SRGELLLMLDADGATKVT 172 (283)
Q Consensus 155 a~~d~i~~~D~D~~~~~~ 172 (283)
...|-|+++|+|..+-.+
T Consensus 93 ~~ydrvlYLDaD~lv~~d 110 (333)
T 1ll2_A 93 TQYSKCVFMDADTLVLAN 110 (333)
T ss_dssp TTCSEEEEECTTEEECSC
T ss_pred cCCCeEEEEeCCEEeccC
Confidence 457999999999988543
No 82
>2h4a_A YRAM (HI1655); perplasmic binding protein, lipoprotein; 1.35A {Haemophilus influenzae} PDB: 3ckm_A
Probab=34.10 E-value=1e+02 Score=25.71 Aligned_cols=63 Identities=13% Similarity=0.190 Sum_probs=43.7
Q ss_pred eEEEEEeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCC
Q 023346 67 YISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGR 140 (283)
Q Consensus 67 ~vsviip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~ 140 (283)
+|.++.|.=+....+.+.++.-.+... ...+.|+++.||++++ .....+++.++ ++.++..+-
T Consensus 2 kIG~llplSG~~a~~G~~~~~G~~lA~------~G~~i~l~~~D~~~~~-a~~~~~~l~~~----~v~~IiGp~ 64 (325)
T 2h4a_A 2 QIGLLLPLSGDGQILGTTIQSGFNDAK------GNSTIPVQVFDTSMNS-VQDIIAQAKQA----GIKTLVGPL 64 (325)
T ss_dssp CEEEEECCSSTTHHHHHHHHHHHHHHH------TTCCSCEEEEETTTSC-HHHHHHHHHHT----TCCEEECCC
T ss_pred cEEEEECCCCccHHHHHHHHHHHHHhc------cCCCceEEEEECCCCh-HHHHHHHHHHC----CCCEEEeeC
Confidence 478888887777767766666544221 3568999999999865 66677666532 577777653
No 83
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=34.08 E-value=20 Score=30.80 Aligned_cols=82 Identities=12% Similarity=0.100 Sum_probs=48.2
Q ss_pred CCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCC-CCCHHHHHHHHHHHc
Q 023346 77 EEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGR-NHGKGEAIRKGMLHS 155 (283)
Q Consensus 77 e~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~-~~gk~~a~n~g~~~a 155 (283)
....|..+++.+.+ . .--+|+|+-+.. ..+.+.+ ... ++.++..++ ..|...++..+.+
T Consensus 30 g~pli~~~l~~l~~--------~--~~~~i~vv~~~~---i~~~~~~---~~~--~i~~~~~~~~~~g~~~~l~~~~~-- 89 (401)
T 2ggo_A 30 SKPLIEYQIEYLRK--------C--GIRDITVIVSSK---NKEYFEK---KLK--EISIVTQKDDIKGTGAAILSAKF-- 89 (401)
T ss_dssp TEEHHHHHHHHHHH--------T--TCCEEEEEECGG---GHHHHHH---HCT--TCEEEECCTTCCBSTTTGGGCCC--
T ss_pred CEeHHHHHHHHHHH--------C--CCCEEEEEeCHH---HHHHhhc---cCC--cEEEEeCCCCCCChHHHHHHhcc--
Confidence 34666666666655 1 134777775432 2333222 222 477777664 4555544433332
Q ss_pred CCCEEEEEeCCCCCC-hhhHHHHHH
Q 023346 156 RGELLLMLDADGATK-VTDLEKLES 179 (283)
Q Consensus 156 ~~d~i~~~D~D~~~~-~~~l~~~~~ 179 (283)
.+.++++.+|..+. +..++++++
T Consensus 90 -~~~~lv~~~D~~~~~~~~~~~l~~ 113 (401)
T 2ggo_A 90 -NDEALIIYGDLFFSNEKEICNIIT 113 (401)
T ss_dssp -SSEEEEEETTEEESCSHHHHHHTT
T ss_pred -CCCEEEEeCccccccHHHHHHHHH
Confidence 68888999999876 777887776
No 84
>4f11_A Gamma-aminobutyric acid type B receptor subunit 2; venus flytrap module, G-protein coupled receptor, signaling; 2.38A {Homo sapiens} PDB: 4f12_A*
Probab=31.28 E-value=2.2e+02 Score=24.16 Aligned_cols=89 Identities=10% Similarity=0.140 Sum_probs=49.9
Q ss_pred CCceEEEEEeecCCCC--ChH----HHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcc-hHHHHHHHHHHcCCCcEEEE
Q 023346 64 AEKYISLIIPAFNEEH--RLP----GALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDG-TKRVAFDFVRKYTVDNVRII 136 (283)
Q Consensus 64 ~~p~vsviip~~ne~~--~l~----~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~-t~~~~~~~~~~~~~~~~~~~ 136 (283)
...+|.++.|.-+... ... ..++-.++++.... --+..++|+++.||+++.. ....++++..+.+ ++..+
T Consensus 13 ~~i~IG~~~plsG~~a~~~~g~~~~~~~~lAv~~iN~~g-~l~g~~l~l~~~D~~~~~~~a~~~a~~li~~~~--~v~av 89 (433)
T 4f11_A 13 PPLSIMGLMPLTKEVAKGSIGRGVLPAVELAIEQIRNES-LLRPYFLDLRLYDTECDNAKGLKAFYDAIKYGP--NHLMV 89 (433)
T ss_dssp CEEEEEEEECCCTTSTTHHHHHHHHHHHHHHHHHHHHTT-TTTTCEEEEEEEECTTCHHHHHHHHHHHHHHSC--CCSEE
T ss_pred CceEEEEEEEecCCCCCCccchhHHHHHHHHHHHHhccC-CCCCCEEEEEEecCCCCHHHHHHHHHHHHhcCC--ceEEE
Confidence 4567899999877644 333 33333333333210 0134589999999987655 4566667766533 45555
Q ss_pred EcCCCCCHHHHHHHHHHHc
Q 023346 137 LLGRNHGKGEAIRKGMLHS 155 (283)
Q Consensus 137 ~~~~~~gk~~a~n~g~~~a 155 (283)
-.+...+-+.+....++..
T Consensus 90 iG~~~S~~~~a~~~~~~~~ 108 (433)
T 4f11_A 90 FGGVCPSVTSIIAESLQGW 108 (433)
T ss_dssp EECCSHHHHHHHHHTHHHH
T ss_pred ECCCcchHHHHHHHHHHhc
Confidence 5554444444444444443
No 85
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=30.72 E-value=1.8e+02 Score=22.66 Aligned_cols=31 Identities=6% Similarity=-0.031 Sum_probs=23.4
Q ss_pred HHHHHHHHHcCCCEEEEEeCCCCCChhhHHH
Q 023346 146 EAIRKGMLHSRGELLLMLDADGATKVTDLEK 176 (283)
Q Consensus 146 ~a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~ 176 (283)
..+-..++..+-|++++.-=--.++++.|+.
T Consensus 76 ~~~~~~l~~~~~Dliv~agy~~il~~~~l~~ 106 (209)
T 4ds3_A 76 DAILAALDVLKPDIICLAGYMRLLSGRFIAP 106 (209)
T ss_dssp HHHHHHHHHHCCSEEEESSCCSCCCHHHHGG
T ss_pred HHHHHHHHhcCCCEEEEeccccCcCHHHHhh
Confidence 4555667777889999888777888877755
No 86
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=29.34 E-value=1.4e+02 Score=22.89 Aligned_cols=63 Identities=17% Similarity=0.257 Sum_probs=35.9
Q ss_pred CceEEEEEeCCCCcc-hHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHHcCCCEEEEEeCCCCC
Q 023346 102 FTYEVLIIDDGSSDG-TKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGAT 169 (283)
Q Consensus 102 ~~~eiivvdd~s~d~-t~~~~~~~~~~~~~~~~~~~~~~~~~gk~~a~n~g~~~a~~d~i~~~D~D~~~ 169 (283)
..-.|++|||.-+-+ |...+.+...+.....+.+.. ...+..+... +.... +++.+.-.|...
T Consensus 119 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v~~---~v~~~~~~~~-l~~~~-~~v~~~~~~~f~ 182 (208)
T 1wd5_A 119 KGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAV---PVASPEAVER-LKARA-EVVALSVPQDFA 182 (208)
T ss_dssp TTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEE---EEBCHHHHHH-HHTTS-EEEEEECCTTCC
T ss_pred CCCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEEEE---EEcCHHHHHH-hcccC-cEEEEecCcchh
Confidence 346899999996554 776665555554433455444 1233344333 33444 888876555443
No 87
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=27.75 E-value=2.2e+02 Score=22.24 Aligned_cols=32 Identities=13% Similarity=0.016 Sum_probs=24.5
Q ss_pred HHHHHHHHHcCCCEEEEEeCCCCCChhhHHHH
Q 023346 146 EAIRKGMLHSRGELLLMLDADGATKVTDLEKL 177 (283)
Q Consensus 146 ~a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~~ 177 (283)
.++-..++..+-|++++.-=--.++++.|+..
T Consensus 79 ~~~~~~l~~~~~Dlivlagy~~iL~~~~l~~~ 110 (215)
T 3da8_A 79 VAITAATAAHEPDLVVSAGFMRILGPQFLSRF 110 (215)
T ss_dssp HHHHHHHHTTCCSEEEEEECCSCCCHHHHHHH
T ss_pred HHHHHHHHhhCCCEEEEcCchhhCCHHHHhhc
Confidence 34455667778899999998888888888653
No 88
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=26.89 E-value=96 Score=23.46 Aligned_cols=103 Identities=13% Similarity=0.180 Sum_probs=52.9
Q ss_pred CCCCceEEEEEeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcCCC
Q 023346 62 DPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRN 141 (283)
Q Consensus 62 ~~~~p~vsviip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~ 141 (283)
..+.|+|.||+-.....+..+++.+.+.+ -.-++|+-|+- --.|.+.+.++.++.....++++.--
T Consensus 9 ~~~~P~V~IimGS~SD~~v~~~a~~~l~~---------~gi~~ev~V~s---aHR~p~~l~~~~~~a~~~g~~ViIa~-- 74 (173)
T 4grd_A 9 THSAPLVGVLMGSSSDWDVMKHAVAILQE---------FGVPYEAKVVS---AHRMPDEMFDYAEKARERGLRAIIAG-- 74 (173)
T ss_dssp CCSSCSEEEEESSGGGHHHHHHHHHHHHH---------TTCCEEEEECC---TTTSHHHHHHHHHHHTTTTCSEEEEE--
T ss_pred CCCCCeEEEEeCcHhHHHHHHHHHHHHHH---------cCCCEEEEEEc---cccCHHHHHHHHHHHHhcCCeEEEEe--
Confidence 34678899999877776666555444433 34578988874 44455555555444332234443321
Q ss_pred CCHHHHHHHHH-HHcCCCEEEEE-eCCCCCChhhHHHHH
Q 023346 142 HGKGEAIRKGM-LHSRGELLLML-DADGATKVTDLEKLE 178 (283)
Q Consensus 142 ~gk~~a~n~g~-~~a~~d~i~~~-D~D~~~~~~~l~~~~ 178 (283)
-|.++++--.+ ..+.-++|.+= .....---|.|-.++
T Consensus 75 AG~aahLpgvvA~~t~~PVIgVPv~~~~l~G~dsLlSiv 113 (173)
T 4grd_A 75 AGGAAHLPGMLAAKTTVPVLGVPVASKYLKGVDSLHSIV 113 (173)
T ss_dssp EESSCCHHHHHHHHCCSCEEEEEECCTTTTTHHHHHHHH
T ss_pred ccccccchhhheecCCCCEEEEEcCCCCCCchhHHHHHH
Confidence 12222222222 24566777763 433333334444443
No 89
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=26.07 E-value=64 Score=26.20 Aligned_cols=17 Identities=18% Similarity=0.165 Sum_probs=14.1
Q ss_pred CCCEEEEEeCCCCCChh
Q 023346 156 RGELLLMLDADGATKVT 172 (283)
Q Consensus 156 ~~d~i~~~D~D~~~~~~ 172 (283)
..|-|+++|+|..+-.+
T Consensus 95 ~~~~vlylD~D~~v~~~ 111 (263)
T 3u2u_A 95 QYSKCVFMDADTLVLAN 111 (263)
T ss_dssp TCSEEEEECTTEEECSC
T ss_pred CcceEEEEcCCEeeccC
Confidence 57899999999998543
No 90
>3ckm_A YRAM (HI1655), LPOA; periplasmic-binding protein, lipoprotein, unliganded, biosynthetic protein; 1.35A {Haemophilus influenzae} SCOP: c.93.1.1
Probab=25.13 E-value=1.5e+02 Score=24.32 Aligned_cols=62 Identities=13% Similarity=0.213 Sum_probs=39.1
Q ss_pred eEEEEEeecCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcchHHHHHHHHHHcCCCcEEEEEcC
Q 023346 67 YISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG 139 (283)
Q Consensus 67 ~vsviip~~ne~~~l~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~ 139 (283)
+|.++.|.=+....+.+.++.=.+.- ....+.|+++.||.++. +....+.+ .+. ++..+-.+
T Consensus 4 kIG~l~PlSG~~a~~G~~~~~g~~lA------~~g~~i~l~~~D~~~~~-~~aa~~~~-~~~---~v~~iiGp 65 (327)
T 3ckm_A 4 QIGLLLPLSGDGQILGTTIQSGFNDA------KGNSTIPVQVFDTSMNS-VQDIIAQA-KQA---GIKTLVGP 65 (327)
T ss_dssp CEEEEECCSSTTHHHHHHHHHHHHHH------HTTCCSCEEEEETTTSC-HHHHHHHH-HHT---TCCEEECC
T ss_pred EEEEEECCCCchHHHHHHHHHHHHHh------CCCCCceEEEEeCCCCH-HHHHHHHH-HHc---CCeEEEEc
Confidence 58899998777766666555533321 23567999999998765 44444433 332 56666654
No 91
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=23.38 E-value=1e+02 Score=25.82 Aligned_cols=47 Identities=19% Similarity=0.153 Sum_probs=30.8
Q ss_pred EEcCCCCCHHHHHHHHHH--Hc-CCCEEEEEeCCCCC-ChhhHHHHHHHHH
Q 023346 136 ILLGRNHGKGEAIRKGML--HS-RGELLLMLDADGAT-KVTDLEKLESQIH 182 (283)
Q Consensus 136 ~~~~~~~gk~~a~n~g~~--~a-~~d~i~~~D~D~~~-~~~~l~~~~~~~~ 182 (283)
+..+...|.+.++-.+.. .. ..+.++++.+|..+ .++.+.++++.+.
T Consensus 76 i~e~~~~gta~ai~~a~~l~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~~~ 126 (337)
T 2cu2_A 76 LLEPLGRDTAGAVLLGVAEALKEGAERLLVLPADHYVGDDEAYREALATML 126 (337)
T ss_dssp EEESSCCHHHHHHHHHHHHHHHHTCSEEEEEESSCEESCHHHHHHHHHHHH
T ss_pred EecCCCCCcHHHHHHHHHHhccCCCCEEEEEECCccCCCHHHHHHHHHHHH
Confidence 334445666666655544 22 36899999999987 4677777776553
No 92
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=23.00 E-value=3.2e+02 Score=22.49 Aligned_cols=95 Identities=12% Similarity=0.125 Sum_probs=51.7
Q ss_pred CceEEEEEeecCCCCCh--HHHHHHHHHHHHHhhhcCCCCceEEEEEeCCCCcc-hHHHHHHHHHHcCCCcEEEEEcCCC
Q 023346 65 EKYISLIIPAFNEEHRL--PGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDG-TKRVAFDFVRKYTVDNVRIILLGRN 141 (283)
Q Consensus 65 ~p~vsviip~~ne~~~l--~~~l~s~~~~~~~~~~~~~~~~~eiivvdd~s~d~-t~~~~~~~~~~~~~~~~~~~~~~~~ 141 (283)
..+|.++.|.-+....+ ....+.+...+....-.-...++|+++.|++++.. ..+.++++..+. ++..+-.+..
T Consensus 4 ~i~IG~~~p~sg~~a~~~g~~~~~g~~~A~~~~~ggi~G~~i~l~~~D~~~~~~~a~~~~~~li~~~---~v~~iiG~~~ 80 (375)
T 3i09_A 4 SVKIGFITDMSGLYADIDGQGGLEAIKMAVADFGGKVNGKPIEVVYADHQNKADIAASKAREWMDRG---GLDLLVGGTN 80 (375)
T ss_dssp SEEEEEEECSSSTTTTTSHHHHHHHHHHHHHHHTSEETTEEEEEEEEECTTCHHHHHHHHHHHHHHS---CEEEEEECSC
T ss_pred CeEEEEEeCCCcccccccCHHHHHHHHHHHHHhCCCCCCeEEEEEEecCCCCHHHHHHHHHHHHhhC---CCEEEECCCC
Confidence 45789999976655433 23444444333332100123469999999987654 456777776543 5776665433
Q ss_pred CCHHHHHHHHHHHcCCCEEEE
Q 023346 142 HGKGEAIRKGMLHSRGELLLM 162 (283)
Q Consensus 142 ~gk~~a~n~g~~~a~~d~i~~ 162 (283)
.+-..+.-..++..+-.+|..
T Consensus 81 s~~~~a~~~~~~~~~ip~i~~ 101 (375)
T 3i09_A 81 SATALSMNQVAAEKKKVYINI 101 (375)
T ss_dssp HHHHHHHHHHHHHHTCEEEEC
T ss_pred cHHHHHHHHHHHHcCceEEEe
Confidence 333344433444444444443
Done!