BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023348
(283 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 127 bits (319), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 138/301 (45%), Gaps = 84/301 (27%)
Query: 61 GSRTAKFSYGYSTFKGKRSSMEDFYET--------SLSEVDGQM-----VAFFGVYD--- 104
GS + YG+++ G+R MED T S S +DG+ FFGVYD
Sbjct: 18 GSHMSVPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHG 77
Query: 105 -VEVFKKTDENY---LSEEKGQHKD----------------------------------A 126
+V E L+EE + K
Sbjct: 78 GSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEIESVAPETV 137
Query: 127 GSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVI-W 185
GST+ AV+ + VAN GDSR V R +A+PLS+DHKPDR DE RIE AGG VI W
Sbjct: 138 GSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQW 197
Query: 186 AGTWRVGGVLAVSRAFGDRLLKQYVVAEPEIQE-EEIDGVDFIIIASDGLWNVISNRDAV 244
G RV GVLA+SR+ GDR LK ++ +PE+ + + D +I+ASDG+W+V+++ +A
Sbjct: 198 NGA-RVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEAC 256
Query: 245 AMVE------HITDAEA---------------------ASRKLIKEAYARGSSDNITCVV 277
M H +A A A+ L K A RGS DNI+ VV
Sbjct: 257 EMARKRILLWHKKNAVAGDASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVV 316
Query: 278 V 278
V
Sbjct: 317 V 317
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 127 bits (318), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 135/293 (46%), Gaps = 84/293 (28%)
Query: 69 YGYSTFKGKRSSMEDFYET--------SLSEVDGQM-----VAFFGVYD----VEVFKKT 111
YG+++ G+R MED T S S +DG+ FFGVYD +V
Sbjct: 14 YGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYC 73
Query: 112 DENY---LSEEKGQHKD----------------------------------AGSTASTAV 134
E L+EE + K GST+ AV
Sbjct: 74 RERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEIESVAPETVGSTSVVAV 133
Query: 135 LLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVI-WAGTWRVGG 193
+ + VAN GDSR V R +A+PLS+DHKPDR DE RIE AGG VI W G RV G
Sbjct: 134 VFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGA-RVFG 192
Query: 194 VLAVSRAFGDRLLKQYVVAEPEIQE-EEIDGVDFIIIASDGLWNVISNRDAVAMVE---- 248
VLA+SR+ GDR LK ++ +PE+ + + D +I+ASDG+W+V+++ +A M
Sbjct: 193 VLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRIL 252
Query: 249 --HITDAEA---------------------ASRKLIKEAYARGSSDNITCVVV 278
H +A A A+ L K A RGS DNI+ VVV
Sbjct: 253 LWHKKNAVAGDASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVV 305
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 135/293 (46%), Gaps = 84/293 (28%)
Query: 69 YGYSTFKGKRSSMEDFYET--------SLSEVDGQM-----VAFFGVYD----VEVFKKT 111
YG+++ G+R MED T S S +DG+ FFGVYD +V
Sbjct: 11 YGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYC 70
Query: 112 DENY---LSEEKGQHKD----------------------------------AGSTASTAV 134
E L+EE + K GST+ AV
Sbjct: 71 RERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIESVAPETVGSTSVVAV 130
Query: 135 LLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVI-WAGTWRVGG 193
+ + VAN GDSR V R +A+PLS+DHKPDR DE RIE AGG VI W G RV G
Sbjct: 131 VFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGA-RVFG 189
Query: 194 VLAVSRAFGDRLLKQYVVAEPEIQE-EEIDGVDFIIIASDGLWNVISNRDAVAMVE---- 248
VLA+SR+ GDR LK ++ +PE+ + + D +I+ASDG+W+V+++ +A M
Sbjct: 190 VLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRIL 249
Query: 249 --HITDAEA---------------------ASRKLIKEAYARGSSDNITCVVV 278
H +A A A+ L K A RGS DNI+ VVV
Sbjct: 250 LWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVV 302
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 124/235 (52%), Gaps = 40/235 (17%)
Query: 72 STFKGKRSSMEDFYETSLSEVDGQMVAFFGVYDVEVFKKTDENYLSEEKGQHKDAGSTAS 131
+T +G++ + + + VDG++ G V K E SE GSTA
Sbjct: 107 NTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASET------VGSTAV 160
Query: 132 TAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVI-WAGTWR 190
A++ ++V+N GDSR V R A+PLS+DHKPDR DE RIE AGG VI W G R
Sbjct: 161 VALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGA-R 219
Query: 191 VGGVLAVSRAFGDRLLKQYVVAEPEI------QEEEIDGVDFIIIASDGLWNVISNRDAV 244
V GVLA+SR+ GDR LK YV+ EPE+ +E+E +I+ASDGLW+V++N++
Sbjct: 220 VFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDEC-----LILASDGLWDVMNNQEVC 274
Query: 245 A------MVEHITD---------------AEAASRKLIKEAYARGSSDNITCVVV 278
++ H + +AA+ L A +GS DNI+ +V+
Sbjct: 275 EIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVI 329
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 124/235 (52%), Gaps = 40/235 (17%)
Query: 72 STFKGKRSSMEDFYETSLSEVDGQMVAFFGVYDVEVFKKTDENYLSEEKGQHKDAGSTAS 131
+T +G++ + + + VDG++ G V K E SE GSTA
Sbjct: 109 NTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASET------VGSTAV 162
Query: 132 TAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVI-WAGTWR 190
A++ ++V+N GDSR V R A+PLS+DHKPDR DE RIE AGG VI W G R
Sbjct: 163 VALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGA-R 221
Query: 191 VGGVLAVSRAFGDRLLKQYVVAEPEI------QEEEIDGVDFIIIASDGLWNVISNRDAV 244
V GVLA+SR+ GDR LK YV+ EPE+ +E+E +I+ASDGLW+V++N++
Sbjct: 222 VFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDEC-----LILASDGLWDVMNNQEVC 276
Query: 245 A------MVEHITD---------------AEAASRKLIKEAYARGSSDNITCVVV 278
++ H + +AA+ L A +GS DNI+ +V+
Sbjct: 277 EIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVI 331
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 124/235 (52%), Gaps = 40/235 (17%)
Query: 72 STFKGKRSSMEDFYETSLSEVDGQMVAFFGVYDVEVFKKTDENYLSEEKGQHKDAGSTAS 131
+T +G++ + + + VDG++ G V K E SE GSTA
Sbjct: 106 NTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASET------VGSTAV 159
Query: 132 TAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVI-WAGTWR 190
A++ ++V+N GDSR V R A+PLS+DHKPDR DE RIE AGG VI W G R
Sbjct: 160 VALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGA-R 218
Query: 191 VGGVLAVSRAFGDRLLKQYVVAEPEI------QEEEIDGVDFIIIASDGLWNVISNRDAV 244
V GVLA+SR+ GDR LK YV+ EPE+ +E+E +I+ASDGLW+V++N++
Sbjct: 219 VFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDEC-----LILASDGLWDVMNNQEVC 273
Query: 245 A------MVEHITD---------------AEAASRKLIKEAYARGSSDNITCVVV 278
++ H + +AA+ L A +GS DNI+ +V+
Sbjct: 274 EIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVI 328
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 124/235 (52%), Gaps = 40/235 (17%)
Query: 72 STFKGKRSSMEDFYETSLSEVDGQMVAFFGVYDVEVFKKTDENYLSEEKGQHKDAGSTAS 131
+T +G++ + + + VDG++ G V K E SE GSTA
Sbjct: 116 NTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASET------VGSTAV 169
Query: 132 TAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVI-WAGTWR 190
A++ ++V+N GDSR V R A+PLS+DHKPDR DE RIE AGG VI W G R
Sbjct: 170 VALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGA-R 228
Query: 191 VGGVLAVSRAFGDRLLKQYVVAEPEI------QEEEIDGVDFIIIASDGLWNVISNRDAV 244
V GVLA+SR+ GDR LK YV+ EPE+ +E+E +I+ASDGLW+V++N++
Sbjct: 229 VFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDEC-----LILASDGLWDVMNNQEVC 283
Query: 245 ------AMVEHITD---------------AEAASRKLIKEAYARGSSDNITCVVV 278
++ H + +AA+ L A +GS DNI+ +V+
Sbjct: 284 EIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVI 338
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 124/235 (52%), Gaps = 40/235 (17%)
Query: 72 STFKGKRSSMEDFYETSLSEVDGQMVAFFGVYDVEVFKKTDENYLSEEKGQHKDAGSTAS 131
+T +G++ + + + VDG++ G V K E SE GSTA
Sbjct: 92 NTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASET------VGSTAV 145
Query: 132 TAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVI-WAGTWR 190
A++ ++V+N GDSR V R A+PLS+DHKPDR DE RIE AGG VI W G R
Sbjct: 146 VALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGA-R 204
Query: 191 VGGVLAVSRAFGDRLLKQYVVAEPEI------QEEEIDGVDFIIIASDGLWNVISNRDAV 244
V GVLA+SR+ GDR LK YV+ EPE+ +E+E +I+ASDGLW+V++N++
Sbjct: 205 VFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDEC-----LILASDGLWDVMNNQEVC 259
Query: 245 ------AMVEHITD---------------AEAASRKLIKEAYARGSSDNITCVVV 278
++ H + +AA+ L A +GS DNI+ +V+
Sbjct: 260 EIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVI 314
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 124/235 (52%), Gaps = 40/235 (17%)
Query: 72 STFKGKRSSMEDFYETSLSEVDGQMVAFFGVYDVEVFKKTDENYLSEEKGQHKDAGSTAS 131
+T +G++ + + + VDG++ G V K E SE GSTA
Sbjct: 103 NTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASET------VGSTAV 156
Query: 132 TAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVI-WAGTWR 190
A++ ++V+N GDSR V R A+PLS+DHKPDR DE RIE AGG VI W G R
Sbjct: 157 VALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGA-R 215
Query: 191 VGGVLAVSRAFGDRLLKQYVVAEPEI------QEEEIDGVDFIIIASDGLWNVISNRDAV 244
V GVLA+SR+ GDR LK YV+ EPE+ +E+E +I+ASDGLW+V++N++
Sbjct: 216 VFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDEC-----LILASDGLWDVMNNQEVC 270
Query: 245 A------MVEHITD---------------AEAASRKLIKEAYARGSSDNITCVVV 278
++ H + +AA+ L A +GS DNI+ +V+
Sbjct: 271 EIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVI 325
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 129/298 (43%), Gaps = 89/298 (29%)
Query: 69 YGYSTFKGKRSSMEDFYET--------SLSEVDGQMV---------AFFGVYD------- 104
YG ++ G+R MED T S S +DG++ FFGVYD
Sbjct: 14 YGVTSICGRRPEMEDSVSTIPRFLQVSSSSLLDGRVTNGFNPHLSAHFFGVYDGHGGSQV 73
Query: 105 ------------VEVFKKTDENYLSEEKGQHK------------------------DAGS 128
E K + + Q K GS
Sbjct: 74 ANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRVDSEIETVAHAPETVGS 133
Query: 129 TASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVI-WAG 187
T+ AV+ + VAN GDSR V R + + LS+DHKPDR DE RIE AGG VI W G
Sbjct: 134 TSVVAVVFPTHIFVANCGDSRAVLCRGKTPLALSVDHKPDRDDEAARIEAAGGKVIRWNG 193
Query: 188 TWRVGGVLAVSRAFGDRLLKQYVVAEPEIQE-EEIDGVDFIIIASDGLWNVISNRDAV-- 244
RV GVLA+SR+ GDR LK V+ +PE+ + D +I+ASDGLW+V++N +
Sbjct: 194 A-RVFGVLAMSRSIGDRYLKPSVIPDPEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDL 252
Query: 245 ----AMVEHITDAEA--------------------ASRKLIKEAYARGSSDNITCVVV 278
++ H +A A A+ L K A +GS DNI+ VVV
Sbjct: 253 ARKRILLWHKKNAMAGEALLPAEKRGEGKDPAAMSAAEYLSKMALQKGSKDNISVVVV 310
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 99/161 (61%), Gaps = 6/161 (3%)
Query: 126 AGSTASTAVLL-GDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVI 184
+G+TA+ A+L G L+VA+VGDSR + R G + L+IDH P+R DE++RI++ GGFV
Sbjct: 215 SGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVA 274
Query: 185 W--AGTWRVGGVLAVSRAFGDRLLKQY-VVAEPEIQEEEIDGVD--FIIIASDGLWNVIS 239
W G V G LA++R+ GD LK V+AEPE + ++ D F+++ +DG+ +++
Sbjct: 275 WNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVN 334
Query: 240 NRDAVAMVEHITDAEAASRKLIKEAYARGSSDNITCVVVRF 280
+++ V D A+ + ++A G+ DN T VVV F
Sbjct: 335 SQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNSTAVVVPF 375
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 99/161 (61%), Gaps = 6/161 (3%)
Query: 126 AGSTASTAVLL-GDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVI 184
+G+TA+ A+L G L+VA+VGDSR + R G + L+IDH P+R DE++RI++ GGFV
Sbjct: 101 SGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVA 160
Query: 185 W--AGTWRVGGVLAVSRAFGDRLLKQY-VVAEPEIQEEEIDGVD--FIIIASDGLWNVIS 239
W G V G LA++R+ GD LK V+AEPE + ++ D F+++ +DG+ +++
Sbjct: 161 WNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVN 220
Query: 240 NRDAVAMVEHITDAEAASRKLIKEAYARGSSDNITCVVVRF 280
+++ V D A+ + ++A G+ DN T VVV F
Sbjct: 221 SQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNSTAVVVPF 261
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 97/179 (54%), Gaps = 23/179 (12%)
Query: 124 KDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFV 183
KD+G TA A+L G L VAN GDSR V R G A+ +S DHKP+ + E QRIE+AGG V
Sbjct: 128 KDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDHKPEDTVEYQRIEKAGGRV 187
Query: 184 IWAGTWRVGGVLAVSRAFGDRLLK---------QYVVAEPEIQEEEIDGVD-FIIIASDG 233
G RV G L +SRA GD K Q + A P+I++ + D F+++A DG
Sbjct: 188 TLDG--RVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDG 245
Query: 234 LWNVISNRDAVAMV-EHITDAEAASRKLIKEAY-------ARG---SSDNITCVVVRFE 281
+WN +++ V V E I K+ +E + RG DN+T ++V+F+
Sbjct: 246 IWNFMTSEQVVQFVQERINKPGMKLSKICEELFDHCLAPHTRGDGTGCDNMTAIIVQFK 304
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 95/194 (48%), Gaps = 25/194 (12%)
Query: 108 FKKTDE---NYLSEEKGQHKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSID 164
F K DE N+ G + +GSTA ++ + N GDSR V R G + D
Sbjct: 112 FLKIDEYMRNFSDLRNGMDR-SGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQD 170
Query: 165 HKPDRSDERQRIEEAGGFVIWAGTWRVGGVLAVSRAFGDRLLK---------QYVVAEPE 215
HKP E++RI+ AGG V+ RV G LAVSRA GD K Q V EPE
Sbjct: 171 HKPCNPREKERIQNAGGSVM---IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPE 227
Query: 216 IQE---EEIDGVDFIIIASDGLWNVISNRDAVAMV----EHITDAEAASRKLIKEAYARG 268
+ E E D +FII+A DG+W+V+SN + V E D E ++ +G
Sbjct: 228 VYEILRAEED--EFIILAXDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKG 285
Query: 269 SSDNITCVVVRFEN 282
S DN++ V+V F N
Sbjct: 286 SRDNMSIVLVCFSN 299
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 115/276 (41%), Gaps = 62/276 (22%)
Query: 67 FSYGYSTFKGKRSSMEDFYETSLSEVDG-QMVAFFGVYDVEV------------------ 107
YG S+ +G R MED + + G + +FF VYD
Sbjct: 22 LRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITN 81
Query: 108 -----------------------FKKTDENY--LSEEKGQHKDAGSTASTAVLLGDRLLV 142
F + DE+ +SE+K +GSTA ++
Sbjct: 82 NQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYF 141
Query: 143 ANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVIWAGTWRVGGVLAVSRAFG 202
N GDSR + R + DHKP E++RI+ AGG V+ RV G LAVSRA G
Sbjct: 142 INCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVM---IQRVNGSLAVSRALG 198
Query: 203 DRLLK---------QYVVAEPEIQEEEIDGVD--FIIIASDGLWNVISNRDAVAMV---- 247
D K Q V EPE+ + E D FII+A DG+W+V+ N + V
Sbjct: 199 DFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRL 258
Query: 248 EHITDAEAASRKLIKEAYARGSSDNITCVVVRFENS 283
E D E +++ +GS DN++ +++ F N+
Sbjct: 259 EVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNA 294
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 115/276 (41%), Gaps = 62/276 (22%)
Query: 67 FSYGYSTFKGKRSSMEDFYETSLSEVDG-QMVAFFGVYDVEV------------------ 107
YG S+ +G R MED + + G + +FF VYD
Sbjct: 22 LRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITN 81
Query: 108 -----------------------FKKTDENY--LSEEKGQHKDAGSTASTAVLLGDRLLV 142
F + DE+ +SE+K +GSTA ++
Sbjct: 82 NQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYF 141
Query: 143 ANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVIWAGTWRVGGVLAVSRAFG 202
N GDSR + R + DHKP E++RI+ AGG V+ RV G LAVSRA G
Sbjct: 142 INCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVM---IQRVNGSLAVSRALG 198
Query: 203 DRLLK---------QYVVAEPEIQEEEIDGVD--FIIIASDGLWNVISNRDAVAMV---- 247
D K Q V EPE+ + E D FII+A DG+W+V+ N + V
Sbjct: 199 DFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRL 258
Query: 248 EHITDAEAASRKLIKEAYARGSSDNITCVVVRFENS 283
E D E +++ +GS DN++ +++ F N+
Sbjct: 259 EVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNA 294
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
pdb|2ISN|B Chain B, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
Length = 364
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 121 GQHKDAGSTASTAVLLGDRLLVA-NVGDSRVVASRA-GSAIPLSIDHKPDRSDERQRIEE 178
G++ + G L+ A N+GDSR + G LS DHKP+ E RIE+
Sbjct: 155 GRYPRVPDVQQKTIPAGSFLVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEK 214
Query: 179 AGGFVIWAGTWRVGGVLAVSRAFGDRLLK---------QYVVAEPEIQEEEIDGVDFIII 229
AGG V RV GVLA+SRAFGD K Q V+A P++++ D +++
Sbjct: 215 AGGSVETFDVPRVDGVLALSRAFGDSDFKXNPNLPPEEQKVIAVPDVRQFYALSSDLLLL 274
Query: 230 ASDGL-------WNVISNRDAVAMVEHITDAEAASRKLIKEAYARGSSDNITCVVVRFEN 282
A DG+ W + + D E + ++ AY S DNI+ +V F N
Sbjct: 275 ACDGVYEPSGXDWAYVRDLTVAEXQRSKGDLEEVAARVXDYAYDXNSQDNISVXLVAFHN 334
Query: 283 S 283
Sbjct: 335 Q 335
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 90 SEVDGQMVAFFGVYDVEVFKKTDENYLSEEKGQHKD-AGSTASTAVLLGDRLLVANVGDS 148
+EVD ++ + +K D + + +KD A ST+ TAVL + V ++GDS
Sbjct: 99 TEVDEKLPQLLDQAVDDXYKNADNELVKXCEQLNKDYASSTSVTAVLAKGFVAVGHLGDS 158
Query: 149 RVVASRAGSAIP-------LSIDHKPDRSDERQRIEEAGGFVIWAGTWR-----VGG--- 193
R+ G P L++DHKPD E+ RI GG V + GG
Sbjct: 159 RIAX---GVETPNGLNCEFLTVDHKPDXPHEKLRIXRNGGSVEYLHNHNNKPFIRGGDFS 215
Query: 194 ----------VLAVSRAFGDRLLKQYVVA-EPEIQEEEIDGVDFI-IIASDGLWNVISNR 241
L SRAFG + LK Y ++ +P+++ + + I+A+DGLW+V S
Sbjct: 216 FRKSRGEQPXQLQYSRAFGGKDLKXYGLSNQPDVRVVRVTPQHRVXILATDGLWDVXSAA 275
Query: 242 DAV-----AMVEHITDAEAASRKLIKEAYARG-SSDNITCVVVRFENS 283
AV A E A+A + E +R S+DNIT V F+ +
Sbjct: 276 QAVEIAXQARQEGRNPAQALVEXTLAEQQSRNQSADNITAXTVFFKKT 323
>pdb|2PK0|A Chain A, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|B Chain B, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|C Chain C, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|D Chain D, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
Length = 250
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 28/179 (15%)
Query: 113 ENYLSEEKGQ---HKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDH---- 165
EN E GQ +K G+T ++GD ++ A+VGDSR+ R G L+ DH
Sbjct: 86 ENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSLVN 145
Query: 166 ---KPDRSDERQRIEEAGGFVIWAGTWRVGGVLAVSRAFGDRLLKQYVVAEPEIQEEEID 222
K + E + +I T +G V G LL++
Sbjct: 146 ELVKAGQLTEEEAASHPQKNII---TQSIGQANPVEPDLGVHLLEEG------------- 189
Query: 223 GVDFIIIASDGLWNVISNRDAVAMVEHITDAEAASRKLIKEAYARGSSDNITCVVVRFE 281
D++++ SDGL N++SN D ++ + ++ LI A RG DNIT +V E
Sbjct: 190 --DYLVVNSDGLTNMLSNADIATVLTQEKTLDDKNQDLITLANHRGGLDNITVALVYVE 246
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 34/153 (22%)
Query: 127 GSTASTAVLLGDRLLVANVGDSRVVASRAG----SAIPLSIDHKPDRSDERQRIEEAGGF 182
G+ A AVLL ++L VANVG +R + ++ L++DH + DE R+ + G
Sbjct: 167 GAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLG-- 224
Query: 183 VIWAGTWRVGGVLA---VSRAFGDRLLK--------------QYVVAEPEIQ-EEEIDGV 224
+ AG + G++ +R GD +K + ++AEPEI + +DGV
Sbjct: 225 -LDAGKIKQVGIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGV 283
Query: 225 D-FIIIASDGLWNVI--------SNRDAVAMVE 248
F+++ S+GL+ + +N++ AM++
Sbjct: 284 TGFLVLMSEGLYKALEAAHGPGQANQEIAAMID 316
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 34/153 (22%)
Query: 127 GSTASTAVLLGDRLLVANVGDSRVVASRAG----SAIPLSIDHKPDRSDERQRIEEAGGF 182
G+ A AVLL ++L VANVG +R + ++ L++DH + DE R+ + G
Sbjct: 165 GAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLG-- 222
Query: 183 VIWAGTWRVGGVLA---VSRAFGDRLLK--------------QYVVAEPEIQ-EEEIDGV 224
+ AG + G++ +R GD +K + ++AEPEI + +DGV
Sbjct: 223 -LDAGKIKQVGIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGV 281
Query: 225 D-FIIIASDGLWNVI--------SNRDAVAMVE 248
F+++ S+GL+ + +N++ AM++
Sbjct: 282 TGFLVLMSEGLYKALEAAHGPGQANQEIAAMID 314
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 34/153 (22%)
Query: 127 GSTASTAVLLGDRLLVANVGDSRVVASRAG----SAIPLSIDHKPDRSDERQRIEEAGGF 182
G+ A AVLL ++L VANVG +R + ++ L++DH + DE R+ + G
Sbjct: 148 GAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLG-- 205
Query: 183 VIWAGTWRVGGVLA---VSRAFGDRLLK--------------QYVVAEPEIQ-EEEIDGV 224
+ AG + G++ +R GD +K + ++AEPEI + +DGV
Sbjct: 206 -LDAGKIKQVGIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGV 264
Query: 225 D-FIIIASDGLWNVI--------SNRDAVAMVE 248
F+++ S+GL+ + +N++ AM++
Sbjct: 265 TGFLVLMSEGLYKALEAAHGPGQANQEIAAMID 297
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 73/172 (42%), Gaps = 49/172 (28%)
Query: 126 AGSTASTAVLLGDRLLVANVGDSRV---VASRAG--SAIPLSIDHKPDRSDERQRIE--- 177
+G+TA A + G L VAN GDSR V G SA+ LS DH E QR++
Sbjct: 199 SGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEH 258
Query: 178 ---EAGGFVIWAGTWRVGGVLAVSRAFGDRLLK--------------------------- 207
EA V R+ G+L RAFGD K
Sbjct: 259 PKNEAKSVV---KQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIP 315
Query: 208 ------QYVVAEPEIQEEEIDGVD-FIIIASDGLWNVISNRDAVAMV-EHIT 251
Y+ AEPE+ + D F+++A+DGLW + +D V +V E++T
Sbjct: 316 PNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLT 367
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 76/172 (44%), Gaps = 49/172 (28%)
Query: 126 AGSTASTAVLLGDRLLVANVGDSRV---VASRAGS--AIPLSIDH--KPDRSDERQRIE- 177
+G+TA A + G L VAN GDSR V GS A+ LS DH + +R ER ++E
Sbjct: 199 SGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNEREVERLKLEH 258
Query: 178 ---EAGGFVIWAGTWRVGGVLAVSRAFGDRLLK--------------------------- 207
EA V R+ G+L RAFGD K
Sbjct: 259 PKNEAKSVV---KQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIP 315
Query: 208 ------QYVVAEPEIQEEEIDGVD-FIIIASDGLWNVISNRDAVAMV-EHIT 251
Y+ AEPE+ + D F+++A+DGLW + +D V +V E++T
Sbjct: 316 PNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLT 367
>pdb|3D8K|A Chain A, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|B Chain B, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|C Chain C, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|D Chain D, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
Length = 377
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 140 LLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGG-FVIWAGTWRVGGVLAVS 198
+ VA++G+SR V +AI LS H ER R++ AGG F G +GGV+ +
Sbjct: 168 IHVASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTTVNGELLLGGVVPXT 227
Query: 199 RAFG 202
RAFG
Sbjct: 228 RAFG 231
>pdb|1TXO|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
SerineTHREONINE PHOSPHATASE PSTPPPP AT 1.95 A.
pdb|1TXO|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
SerineTHREONINE PHOSPHATASE PSTPPPP AT 1.95 A
Length = 237
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 19/159 (11%)
Query: 127 GSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRS--DE-RQRIEEAGGFV 183
G+T + + G+RL + ++GDSR R G ++ D ++ DE R EEA
Sbjct: 95 GTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQTLVDEGRITPEEAHSHP 154
Query: 184 IWAGTWRVGGVLAVSRAFGDRLLKQYVVAEPEIQEEEIDGVDFIIIASDGLWNVISNRDA 243
R+ R L + V EP + E D ++ SDGL + +S+
Sbjct: 155 --------------QRSLIXRALTGHEV-EPTLTXREARAGDRYLLCSDGLSDPVSDETI 199
Query: 244 VAMVEHITDAEAASRKLIKEAYARGSSDNITCVVVRFEN 282
+ ++ AE+A R LI+ A G DN+T VV E+
Sbjct: 200 LEALQIPEVAESAHR-LIELALRGGGPDNVTVVVADLEH 237
>pdb|2JFR|A Chain A, Crystal Structure Of The Ppm Ser-Thr Phosphatase Mspp From
Mycobacterium Smegmatis In Complex With Phosphate At
0.83 A Resolution
pdb|2JFS|A Chain A, Crystal Structure Of The Ppm Ser-Thr Phosphatase Mspp From
Mycobacterium Smegmatis In Complex With Cacodylate
pdb|2JFT|A Chain A, Crystal Structure Of The Ppm Ser-Thr Phosphatase Mspp From
Mycobacterium Smegmatis In Complex With Sulfate
pdb|2V06|A Chain A, Crystal Structure Of The Ppm Ser-Thr Phosphatase Mspp From
Mycobacterium Smegmatis At Ph 5.5
Length = 234
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 16/140 (11%)
Query: 141 LVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVIWAGTWRVGGVLAVSRA 200
LV N+GDS + R G L+ DH + E R+ E W L ++RA
Sbjct: 106 LVVNIGDSPLYRIRDGHMEQLTDDHS--VAGELVRMGE---ITRHEARWHPQRHL-LTRA 159
Query: 201 FGDRLLKQYVVAEPEIQEEEIDGVDFIIIASDGLWNVISNRDAVAMVEHIT--DAEAASR 258
G + ++ P++ + D ++I+SDGL+ + D +V+ T D + A R
Sbjct: 160 LG---IGPHI--GPDVFGIDCGPGDRLLISSDGLF---AAADEALIVDAATSPDPQVAVR 211
Query: 259 KLIKEAYARGSSDNITCVVV 278
+L++ A G SDN T VV+
Sbjct: 212 RLVEVANDAGGSDNTTVVVI 231
>pdb|2J82|A Chain A, Structural Analysis Of The Pp2c Family Phosphatase Tppha
From Thermosynechococcus Elongatus
pdb|2J86|A Chain A, Structural Analysis Of The Pp2c Family Phosphatase Tppha
Of Thermosynechococcus Elongatus
pdb|2J86|B Chain B, Structural Analysis Of The Pp2c Family Phosphatase Tppha
Of Thermosynechococcus Elongatus
Length = 240
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 26/162 (16%)
Query: 125 DAGSTASTAVL--LGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEA--- 179
D G+TA +L GDR A+VGDSR+ R ++ DH I +A
Sbjct: 95 DMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQITSDHT--------WIAQAVQL 146
Query: 180 GGFVIWAG---TWRVGGVLAVSRAFGDRLLKQYVVAEPEIQEEEIDGVDFIIIASDGLWN 236
G I WR +S+ G L Q +IQ +++ D +++ SDGL
Sbjct: 147 GSLTIEQARQHPWR----HVLSQCLGREDLSQI-----DIQPIDLEPGDRLLLCSDGLTE 197
Query: 237 VISNRDAVAMVEHITDAEAASRKLIKEAYARGSSDNITCVVV 278
+++ D +++ + + A+ L+ A G DN+T VV+
Sbjct: 198 ELTD-DVISIYLSEPNVQKAAAALVDAAKTHGGRDNVTVVVI 238
>pdb|2Y09|A Chain A, The Cyanobacterial Pp2c-Like Phosphatase Tppha Requires
Three Metals In The Catalytic Center For Efficient
Catalysis
Length = 240
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 26/162 (16%)
Query: 125 DAGSTASTAVL--LGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEA--- 179
D G+TA +L GDR A+VG SR+ R ++ DH I +A
Sbjct: 95 DMGTTAVVILLDEKGDRAWCAHVGASRIYRWRKDQLQQITSDHT--------WIAQAVQL 146
Query: 180 GGFVIWAG---TWRVGGVLAVSRAFGDRLLKQYVVAEPEIQEEEIDGVDFIIIASDGLWN 236
G I WR +S+ G L Q +IQ +++ D +++ SDGL
Sbjct: 147 GSLTIEQARQHPWR----HVLSQCLGREDLSQI-----DIQPIDLEPGDRLLLCSDGLTE 197
Query: 237 VISNRDAVAMVEHITDAEAASRKLIKEAYARGSSDNITCVVV 278
+++ D +++ + + A+ L+ A G DN+T VV+
Sbjct: 198 ELTD-DVISIYLSEPNVQKAAAALVDAAKTHGGRDNVTVVVI 238
>pdb|2XZV|A Chain A, The Cyanobacterial Pp2c-Like Phosphatase Tppha Requires
Three Metals In The Catalytic Center For Efficient
Catalysis
Length = 240
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 26/162 (16%)
Query: 125 DAGSTASTAVL--LGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEA--- 179
D G+TA +L GDR A+VGDSR+ R ++ DH I +A
Sbjct: 95 DMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQITSDHT--------WIAQAVQL 146
Query: 180 GGFVIWAG---TWRVGGVLAVSRAFGDRLLKQYVVAEPEIQEEEIDGVDFIIIASDGLWN 236
G I WR +S+ G L Q +IQ +++ D +++ S GL
Sbjct: 147 GSLTIEQARQHPWR----HVLSQCLGREDLSQI-----DIQPIDLEPGDRLLLCSAGLTE 197
Query: 237 VISNRDAVAMVEHITDAEAASRKLIKEAYARGSSDNITCVVV 278
+++ D +++ + + A+ L+ A G DN+T VV+
Sbjct: 198 ELTD-DVISIYLSEPNVQKAAAALVDAAKTHGGRDNVTVVVI 238
>pdb|3M62|A Chain A, Crystal Structure Of Ufd2 In Complex With The
Ubiquitin-Like (Ubl) Domain Of Rad23
pdb|3M63|A Chain A, Crystal Structure Of Ufd2 In Complex With The
Ubiquitin-Like (Ubl) Domain Of Dsk2
Length = 968
Score = 28.1 bits (61), Expect = 6.0, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Query: 199 RAFGDRLLK---QYVVAEPEIQEEEIDGVDFIIIASDGL--WNVISNRDAVAMVEHITDA 253
R +GD LL+ Q + +Q E +D + D L ++ S D ++ HI +
Sbjct: 240 RNYGDNLLRSKQQTAMIHESLQAEHKVVIDRLFFIVDKLVRGSLNSRTDMISYFAHIANK 299
Query: 254 ---EAASRKLIKEAYARGSSDNITCVVVRF 280
A KE + G NIT ++VRF
Sbjct: 300 NHLRRADHPPFKELSSNGFMSNITLLLVRF 329
>pdb|2QIZ|A Chain A, Structure Of The Yeast U-Box-Containing Ubiquitin Ligase
Ufd2p
Length = 982
Score = 28.1 bits (61), Expect = 6.1, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Query: 199 RAFGDRLLK---QYVVAEPEIQEEEIDGVDFIIIASDGL--WNVISNRDAVAMVEHITDA 253
R +GD LL+ Q + +Q E +D + D L ++ S D ++ HI +
Sbjct: 254 RNYGDNLLRSKQQTAMIHESLQAEHKVVIDRLFFIVDKLVRGSLNSRTDMISYFAHIANK 313
Query: 254 ---EAASRKLIKEAYARGSSDNITCVVVRF 280
A KE + G NIT ++VRF
Sbjct: 314 NHLRRADHPPFKELSSNGFMSNITLLLVRF 343
>pdb|2QJ0|A Chain A, Structure Of The Yeast U-Box-Containing Ubiquitin Ligase
Ufd2p
Length = 982
Score = 27.7 bits (60), Expect = 7.6, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 199 RAFGDRLLK---QYVVAEPEIQEEEIDGVDFIIIASDGL--WNVISNRDAVAMVEHITDA 253
R +GD LL+ Q +Q E +D + D L ++ S D ++ HI +
Sbjct: 254 RNYGDNLLRSKQQTAXIHESLQAEHKVVIDRLFFIVDKLVRGSLNSRTDXISYFAHIANK 313
Query: 254 ---EAASRKLIKEAYARGSSDNITCVVVRF 280
A KE + G NIT ++VRF
Sbjct: 314 NHLRRADHPPFKELSSNGFXSNITLLLVRF 343
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.130 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,929,517
Number of Sequences: 62578
Number of extensions: 312619
Number of successful extensions: 628
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 552
Number of HSP's gapped (non-prelim): 53
length of query: 283
length of database: 14,973,337
effective HSP length: 98
effective length of query: 185
effective length of database: 8,840,693
effective search space: 1635528205
effective search space used: 1635528205
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 51 (24.3 bits)