Query 023352
Match_columns 283
No_of_seqs 302 out of 1682
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 03:22:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023352.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023352hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01675 plant-AP plant acid 100.0 1.3E-71 2.9E-76 496.5 11.1 217 67-283 13-229 (229)
2 TIGR01680 Veg_Stor_Prot vegeta 100.0 5E-70 1.1E-74 494.1 12.1 229 51-281 22-254 (275)
3 PF03767 Acid_phosphat_B: HAD 100.0 4.7E-53 1E-57 379.0 -0.3 212 67-282 12-228 (229)
4 TIGR01533 lipo_e_P4 5'-nucleot 100.0 1.7E-31 3.7E-36 244.0 8.1 177 97-281 40-238 (266)
5 COG2503 Predicted secreted aci 99.9 7E-26 1.5E-30 200.8 10.0 165 109-281 52-242 (274)
6 PRK11009 aphA acid phosphatase 99.9 8.1E-22 1.8E-26 177.7 7.9 143 129-280 61-218 (237)
7 TIGR01672 AphA HAD superfamily 99.8 4E-19 8.7E-24 160.2 6.9 137 128-275 60-210 (237)
8 COG0637 Predicted phosphatase/ 99.6 1.9E-15 4.1E-20 134.7 4.9 102 171-278 83-188 (221)
9 COG0546 Gph Predicted phosphat 99.5 8.9E-15 1.9E-19 130.0 5.4 95 173-273 88-186 (220)
10 PRK14988 GMP/IMP nucleotidase; 99.5 3.5E-15 7.5E-20 133.1 2.8 102 172-279 91-197 (224)
11 PLN02770 haloacid dehalogenase 99.5 5.5E-15 1.2E-19 133.5 3.0 100 172-275 106-207 (248)
12 PRK13226 phosphoglycolate phos 99.5 6E-15 1.3E-19 131.6 3.2 100 172-275 93-194 (229)
13 PLN03243 haloacid dehalogenase 99.5 1.8E-14 4E-19 131.6 5.8 100 172-277 107-210 (260)
14 PRK13288 pyrophosphatase PpaX; 99.5 7.4E-15 1.6E-19 129.0 2.9 100 172-275 80-181 (214)
15 TIGR01422 phosphonatase phosph 99.5 2.1E-14 4.6E-19 129.5 4.4 100 172-277 97-202 (253)
16 PHA02530 pseT polynucleotide k 99.5 1.3E-13 2.8E-18 127.2 9.4 168 89-275 112-295 (300)
17 TIGR02253 CTE7 HAD superfamily 99.5 3.1E-14 6.8E-19 125.1 4.5 101 172-278 92-197 (221)
18 TIGR03351 PhnX-like phosphonat 99.5 2E-14 4.4E-19 126.5 3.0 99 172-276 85-191 (220)
19 TIGR01449 PGP_bact 2-phosphogl 99.5 1.9E-14 4.2E-19 125.6 2.7 100 172-275 83-184 (213)
20 PLN02575 haloacid dehalogenase 99.5 3.6E-14 7.8E-19 135.8 3.9 102 172-277 214-317 (381)
21 PRK11587 putative phosphatase; 99.4 3.6E-14 7.9E-19 125.3 3.5 100 171-277 80-183 (218)
22 TIGR01428 HAD_type_II 2-haloal 99.4 3E-14 6.4E-19 123.6 2.5 102 172-277 90-193 (198)
23 PRK10826 2-deoxyglucose-6-phos 99.4 4.6E-14 9.9E-19 124.8 3.3 101 172-278 90-194 (222)
24 PRK13225 phosphoglycolate phos 99.4 2.4E-14 5.2E-19 131.7 1.5 96 172-275 140-238 (273)
25 TIGR01454 AHBA_synth_RP 3-amin 99.4 4.2E-14 9.1E-19 123.4 2.8 98 171-274 72-173 (205)
26 TIGR01990 bPGM beta-phosphoglu 99.4 6.2E-14 1.3E-18 119.6 3.2 95 173-275 86-184 (185)
27 PRK06698 bifunctional 5'-methy 99.4 2.6E-13 5.5E-18 133.1 5.0 99 172-276 328-427 (459)
28 PRK13478 phosphonoacetaldehyde 99.4 2.1E-13 4.6E-18 124.2 4.1 99 172-276 99-203 (267)
29 PRK13223 phosphoglycolate phos 99.4 5.1E-13 1.1E-17 122.6 5.9 98 173-276 100-201 (272)
30 TIGR02009 PGMB-YQAB-SF beta-ph 99.4 5.6E-13 1.2E-17 113.7 5.4 95 172-274 86-184 (185)
31 TIGR01548 HAD-SF-IA-hyp1 haloa 99.4 1.9E-13 4.2E-18 118.8 2.3 90 174-267 106-195 (197)
32 PRK10725 fructose-1-P/6-phosph 99.4 3.2E-13 6.9E-18 115.8 3.0 99 172-276 86-186 (188)
33 TIGR01656 Histidinol-ppas hist 99.4 2.5E-13 5.5E-18 113.4 2.2 129 132-277 1-146 (147)
34 PLN02940 riboflavin kinase 99.3 2.9E-13 6.4E-18 130.0 2.8 102 172-277 91-195 (382)
35 PRK13222 phosphoglycolate phos 99.3 6.8E-13 1.5E-17 116.6 4.0 100 172-275 91-192 (226)
36 TIGR01993 Pyr-5-nucltdase pyri 99.3 6.7E-13 1.5E-17 113.9 3.1 96 172-274 82-183 (184)
37 TIGR02252 DREG-2 REG-2-like, H 99.3 9.6E-13 2.1E-17 114.4 3.5 94 173-273 104-202 (203)
38 PRK09449 dUMP phosphatase; Pro 99.3 9.4E-13 2E-17 116.2 3.4 97 173-276 94-196 (224)
39 PLN02779 haloacid dehalogenase 99.3 8.4E-13 1.8E-17 122.1 3.0 98 173-277 143-247 (286)
40 cd01427 HAD_like Haloacid deha 99.3 1.1E-12 2.4E-17 104.0 3.0 120 133-274 1-138 (139)
41 TIGR01662 HAD-SF-IIIA HAD-supe 99.3 1.1E-12 2.3E-17 106.9 1.8 123 132-275 1-130 (132)
42 TIGR01549 HAD-SF-IA-v1 haloaci 99.3 6.9E-13 1.5E-17 110.3 0.4 129 133-267 1-151 (154)
43 PRK09456 ?-D-glucose-1-phospha 99.3 1.7E-12 3.6E-17 113.2 2.2 102 173-278 83-187 (199)
44 TIGR01509 HAD-SF-IA-v3 haloaci 99.3 2.3E-12 4.9E-17 109.2 2.8 97 173-274 84-182 (183)
45 TIGR01664 DNA-3'-Pase DNA 3'-p 99.2 4.4E-12 9.6E-17 108.5 4.0 127 130-271 12-157 (166)
46 TIGR02247 HAD-1A3-hyp Epoxide 99.2 7.5E-12 1.6E-16 109.5 4.2 105 172-278 92-198 (211)
47 PRK10563 6-phosphogluconate ph 99.2 2.4E-12 5.3E-17 113.4 0.9 95 172-275 86-185 (221)
48 PHA02597 30.2 hypothetical pro 99.2 2.3E-11 4.9E-16 105.5 5.5 96 171-275 71-173 (197)
49 COG3700 AphA Acid phosphatase 99.2 6E-11 1.3E-15 101.8 7.8 147 127-280 59-218 (237)
50 TIGR01261 hisB_Nterm histidino 99.2 1.1E-11 2.5E-16 105.5 3.5 125 132-275 2-146 (161)
51 PF13419 HAD_2: Haloacid dehal 99.2 2.4E-12 5.3E-17 106.9 -0.7 99 171-273 74-174 (176)
52 TIGR00213 GmhB_yaeD D,D-heptos 99.2 9.1E-12 2E-16 106.9 1.5 119 132-272 2-146 (176)
53 TIGR02254 YjjG/YfnB HAD superf 99.1 1.3E-11 2.9E-16 108.1 2.4 100 172-275 95-197 (224)
54 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.1 3.3E-11 7.2E-16 103.9 4.4 105 172-279 78-193 (201)
55 PRK10748 flavin mononucleotide 99.1 1.4E-11 3E-16 110.6 1.9 92 172-275 111-207 (238)
56 PRK06769 hypothetical protein; 99.1 1.3E-11 2.8E-16 106.0 1.0 126 130-275 3-136 (173)
57 PRK08942 D,D-heptose 1,7-bisph 99.1 2E-11 4.4E-16 105.0 2.2 126 131-275 3-146 (181)
58 TIGR01689 EcbF-BcbF capsule bi 99.1 9.9E-11 2.1E-15 96.0 5.9 75 132-227 2-88 (126)
59 PRK13582 thrH phosphoserine ph 99.1 5E-11 1.1E-15 103.6 3.9 91 171-266 65-160 (205)
60 TIGR00338 serB phosphoserine p 99.1 1.9E-11 4.2E-16 107.4 1.2 94 172-272 83-191 (219)
61 PLN02919 haloacid dehalogenase 99.1 3.7E-11 8.1E-16 128.5 3.6 100 174-277 161-263 (1057)
62 TIGR01685 MDP-1 magnesium-depe 99.1 2E-11 4.2E-16 105.5 1.1 137 131-278 2-159 (174)
63 COG1011 Predicted hydrolase (H 99.1 8.6E-11 1.9E-15 103.3 4.5 100 172-276 97-199 (229)
64 TIGR01489 DKMTPPase-SF 2,3-dik 99.1 1.3E-10 2.8E-15 99.0 5.2 99 172-273 70-185 (188)
65 PLN02954 phosphoserine phospha 99.1 1.1E-10 2.3E-15 103.0 4.4 138 130-270 11-189 (224)
66 smart00775 LNS2 LNS2 domain. T 99.1 1E-10 2.2E-15 99.3 4.0 118 133-266 1-135 (157)
67 COG2179 Predicted hydrolase of 99.0 4E-10 8.7E-15 95.7 6.7 109 128-275 25-137 (175)
68 PF08235 LNS2: LNS2 (Lipin/Ned 99.0 1.7E-10 3.7E-15 97.8 3.9 126 133-275 1-148 (157)
69 KOG2914 Predicted haloacid-hal 99.0 2.8E-10 6E-15 101.8 5.2 147 129-278 8-198 (222)
70 PRK09552 mtnX 2-hydroxy-3-keto 99.0 2.1E-10 4.6E-15 101.5 3.0 92 171-268 71-178 (219)
71 TIGR01681 HAD-SF-IIIC HAD-supe 99.0 3.4E-10 7.4E-15 92.6 3.8 111 132-265 1-123 (128)
72 TIGR01493 HAD-SF-IA-v2 Haloaci 99.0 7E-11 1.5E-15 100.2 -0.3 85 172-267 88-173 (175)
73 smart00577 CPDc catalytic doma 99.0 3.6E-10 7.8E-15 94.6 3.6 128 130-269 1-135 (148)
74 TIGR01670 YrbI-phosphatas 3-de 99.0 1.3E-10 2.8E-15 98.0 0.8 115 132-277 2-119 (154)
75 TIGR02726 phenyl_P_delta pheny 98.9 2.8E-10 6.1E-15 97.8 0.8 117 131-277 7-125 (169)
76 PRK05446 imidazole glycerol-ph 98.9 9.2E-10 2E-14 104.8 3.7 131 130-278 1-149 (354)
77 PF13344 Hydrolase_6: Haloacid 98.9 3.3E-09 7.1E-14 83.6 5.2 64 134-224 1-64 (101)
78 TIGR01668 YqeG_hyp_ppase HAD s 98.8 2.1E-09 4.6E-14 92.0 3.6 111 129-275 23-135 (170)
79 PRK09484 3-deoxy-D-manno-octul 98.8 2E-09 4.4E-14 93.2 1.2 112 130-271 20-134 (183)
80 TIGR01684 viral_ppase viral ph 98.7 1.6E-08 3.6E-13 93.6 5.7 80 129-235 124-205 (301)
81 TIGR03333 salvage_mtnX 2-hydro 98.7 1.1E-08 2.3E-13 90.4 2.9 97 172-272 68-178 (214)
82 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.7 2.1E-08 4.6E-13 90.2 4.6 71 129-227 6-77 (242)
83 TIGR02137 HSK-PSP phosphoserin 98.6 1.9E-08 4E-13 88.9 3.6 90 172-266 66-160 (203)
84 TIGR01663 PNK-3'Pase polynucle 98.6 1.5E-08 3.3E-13 101.0 2.9 122 129-266 166-300 (526)
85 PLN02811 hydrolase 98.6 1.7E-08 3.7E-13 89.3 2.2 104 172-277 76-185 (220)
86 PRK11133 serB phosphoserine ph 98.6 2.6E-08 5.6E-13 93.9 3.5 90 171-267 178-281 (322)
87 KOG3085 Predicted hydrolase (H 98.6 8.8E-08 1.9E-12 86.4 5.8 103 173-280 112-217 (237)
88 TIGR01488 HAD-SF-IB Haloacid D 98.6 5.8E-08 1.3E-12 82.0 4.5 93 171-266 70-174 (177)
89 PLN02645 phosphoglycolate phos 98.6 6.4E-08 1.4E-12 90.6 4.9 67 130-223 27-93 (311)
90 TIGR01458 HAD-SF-IIA-hyp3 HAD- 98.5 1.3E-07 2.8E-12 86.2 6.0 64 132-218 2-65 (257)
91 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.5 8.1E-08 1.8E-12 83.2 4.3 103 173-278 86-200 (202)
92 PRK10444 UMP phosphatase; Prov 98.5 1.3E-07 2.9E-12 85.9 5.9 60 132-218 2-61 (248)
93 COG0647 NagD Predicted sugar p 98.5 2.2E-07 4.7E-12 85.5 6.9 103 129-258 6-119 (269)
94 PRK08238 hypothetical protein; 98.5 1.9E-07 4.2E-12 92.4 6.3 85 172-267 70-156 (479)
95 PRK11590 hypothetical protein; 98.5 2.2E-07 4.8E-12 82.0 5.7 103 173-278 94-205 (211)
96 TIGR01686 FkbH FkbH-like domai 98.4 1.1E-07 2.4E-12 89.3 3.3 114 130-268 2-121 (320)
97 PHA03398 viral phosphatase sup 98.4 2.6E-07 5.6E-12 85.7 5.6 73 129-228 126-199 (303)
98 TIGR01452 PGP_euk phosphoglyco 98.4 3E-07 6.5E-12 84.6 5.0 61 131-218 2-62 (279)
99 COG1778 Low specificity phosph 98.4 1.9E-07 4.2E-12 78.8 3.2 108 130-265 7-114 (170)
100 PF06941 NT5C: 5' nucleotidase 98.4 1.5E-07 3.3E-12 81.7 2.3 89 171-278 70-164 (191)
101 COG0560 SerB Phosphoserine pho 98.3 4E-07 8.6E-12 81.0 3.6 89 173-264 76-174 (212)
102 PF06888 Put_Phosphatase: Puta 98.3 8.7E-07 1.9E-11 80.0 5.4 131 133-266 2-185 (234)
103 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.3 7.4E-07 1.6E-11 80.8 4.8 61 132-219 2-62 (249)
104 TIGR01691 enolase-ppase 2,3-di 98.3 4.6E-07 9.9E-12 81.1 2.5 99 172-275 93-195 (220)
105 PRK01158 phosphoglycolate phos 98.2 2.4E-06 5.2E-11 75.4 5.8 58 131-217 3-60 (230)
106 PRK10530 pyridoxal phosphate ( 98.2 2.3E-06 5E-11 77.4 5.8 59 131-218 3-61 (272)
107 PF09419 PGP_phosphatase: Mito 98.2 3.3E-06 7.2E-11 72.6 6.0 118 127-278 37-166 (168)
108 PRK15126 thiamin pyrimidine py 98.2 2.7E-06 5.9E-11 77.4 5.8 59 131-218 2-60 (272)
109 PRK10976 putative hydrolase; P 98.2 2.9E-06 6.3E-11 76.8 5.9 59 131-218 2-60 (266)
110 PRK00192 mannosyl-3-phosphogly 98.2 3E-06 6.5E-11 77.5 5.7 59 131-218 4-62 (273)
111 TIGR01487 SPP-like sucrose-pho 98.1 4.2E-06 9.1E-11 73.6 5.9 45 132-202 2-46 (215)
112 PRK10513 sugar phosphate phosp 98.1 4.3E-06 9.3E-11 75.8 6.0 58 131-217 3-60 (270)
113 COG0241 HisB Histidinol phosph 98.1 3E-06 6.4E-11 73.7 4.5 123 131-275 5-148 (181)
114 KOG1615 Phosphoserine phosphat 98.1 4.8E-06 1E-10 72.8 5.3 137 130-269 15-192 (227)
115 TIGR02463 MPGP_rel mannosyl-3- 98.1 4.8E-06 1E-10 73.3 5.5 55 134-217 2-56 (221)
116 TIGR01482 SPP-subfamily Sucros 98.1 4E-06 8.7E-11 73.7 4.9 43 134-202 1-43 (225)
117 PF08282 Hydrolase_3: haloacid 98.1 6.3E-06 1.4E-10 72.2 5.8 55 134-217 1-55 (254)
118 COG0561 Cof Predicted hydrolas 98.1 6.3E-06 1.4E-10 74.6 5.9 59 131-218 3-61 (264)
119 PRK03669 mannosyl-3-phosphogly 98.0 7.1E-06 1.5E-10 75.0 5.9 59 130-217 6-64 (271)
120 TIGR02461 osmo_MPG_phos mannos 98.0 6.5E-06 1.4E-10 73.6 5.5 56 133-218 1-56 (225)
121 PF12710 HAD: haloacid dehalog 98.0 2.1E-06 4.5E-11 73.2 2.2 84 177-264 92-189 (192)
122 TIGR01460 HAD-SF-IIA Haloacid 98.0 5.7E-06 1.2E-10 74.4 4.7 58 134-218 1-59 (236)
123 KOG3120 Predicted haloacid deh 98.0 2.3E-05 5E-10 69.8 8.0 134 129-265 11-197 (256)
124 TIGR00099 Cof-subfamily Cof su 98.0 9.3E-06 2E-10 73.2 5.7 56 133-217 1-56 (256)
125 TIGR01486 HAD-SF-IIB-MPGP mann 98.0 9E-06 2E-10 73.5 5.2 56 134-218 2-57 (256)
126 PRK12702 mannosyl-3-phosphogly 98.0 1.1E-05 2.3E-10 75.1 5.5 59 131-218 1-59 (302)
127 PTZ00174 phosphomannomutase; P 98.0 1.3E-05 2.8E-10 72.5 6.0 46 130-201 4-49 (247)
128 TIGR01545 YfhB_g-proteo haloac 97.9 1.4E-05 3.1E-10 70.8 5.6 103 173-278 93-204 (210)
129 TIGR02251 HIF-SF_euk Dullard-l 97.9 9.3E-06 2E-10 69.1 3.7 131 131-271 1-134 (162)
130 PF08645 PNK3P: Polynucleotide 97.9 4.2E-06 9E-11 71.2 1.4 109 132-260 1-128 (159)
131 TIGR01456 CECR5 HAD-superfamil 97.9 1.7E-05 3.8E-10 74.5 5.3 59 133-218 2-65 (321)
132 KOG3040 Predicted sugar phosph 97.8 3.4E-05 7.4E-10 68.2 6.3 100 130-267 6-106 (262)
133 TIGR02250 FCP1_euk FCP1-like p 97.8 6.6E-05 1.4E-09 63.7 7.1 130 128-266 3-143 (156)
134 PLN02887 hydrolase family prot 97.8 3.8E-05 8.3E-10 77.8 6.0 58 130-216 307-364 (580)
135 PTZ00445 p36-lilke protein; Pr 97.8 4.2E-05 9.1E-10 67.9 5.3 166 95-278 11-207 (219)
136 TIGR01544 HAD-SF-IE haloacid d 97.7 3.3E-05 7.1E-10 71.4 4.8 105 160-267 107-228 (277)
137 TIGR01484 HAD-SF-IIB HAD-super 97.7 5.5E-05 1.2E-09 65.6 5.6 43 134-201 2-44 (204)
138 KOG2882 p-Nitrophenyl phosphat 97.7 0.00017 3.7E-09 66.9 8.2 97 129-252 20-128 (306)
139 PF00702 Hydrolase: haloacid d 97.6 8.1E-06 1.7E-10 70.5 -1.2 88 172-267 125-212 (215)
140 TIGR01459 HAD-SF-IIA-hyp4 HAD- 97.6 2.7E-05 5.8E-10 70.0 1.9 95 175-273 139-238 (242)
141 TIGR02244 HAD-IG-Ncltidse HAD 97.6 6.9E-05 1.5E-09 71.3 4.6 100 173-275 183-322 (343)
142 PRK14502 bifunctional mannosyl 97.5 0.00014 3E-09 74.6 6.3 61 128-217 413-473 (694)
143 PRK10187 trehalose-6-phosphate 97.5 0.00017 3.7E-09 66.1 6.2 50 131-201 14-64 (266)
144 PF11019 DUF2608: Protein of u 97.5 0.00015 3.2E-09 66.3 5.2 89 130-218 19-125 (252)
145 PLN02423 phosphomannomutase 97.5 0.00018 3.9E-09 65.1 5.4 45 129-200 4-49 (245)
146 COG4850 Uncharacterized conser 97.4 0.00023 4.9E-09 66.7 5.8 125 131-265 161-293 (373)
147 TIGR01512 ATPase-IB2_Cd heavy 97.4 0.00014 3.1E-09 73.0 3.7 82 172-267 360-442 (536)
148 TIGR01485 SPP_plant-cyano sucr 97.3 0.00022 4.8E-09 64.2 3.8 47 132-201 2-48 (249)
149 KOG2116 Protein involved in pl 97.3 0.00036 7.8E-09 70.4 5.4 118 132-266 531-666 (738)
150 TIGR01525 ATPase-IB_hvy heavy 97.2 0.00022 4.8E-09 71.9 3.3 82 172-267 382-464 (556)
151 KOG3109 Haloacid dehalogenase- 97.2 0.00023 5E-09 63.4 2.6 110 159-273 81-202 (244)
152 COG4359 Uncharacterized conser 97.1 0.00064 1.4E-08 59.2 4.8 102 171-273 70-182 (220)
153 COG5083 SMP2 Uncharacterized p 97.1 0.00048 1E-08 66.8 4.3 121 130-266 374-510 (580)
154 TIGR01452 PGP_euk phosphoglyco 97.1 0.00024 5.3E-09 65.3 1.9 96 174-273 143-244 (279)
155 PLN03017 trehalose-phosphatase 97.0 0.0015 3.3E-08 62.7 6.8 53 127-201 107-159 (366)
156 TIGR01511 ATPase-IB1_Cu copper 97.0 0.0007 1.5E-08 68.5 4.7 80 172-266 403-482 (562)
157 TIGR02471 sucr_syn_bact_C sucr 96.9 0.00051 1.1E-08 61.2 2.6 41 133-201 1-41 (236)
158 TIGR01458 HAD-SF-IIA-hyp3 HAD- 96.9 0.00039 8.5E-09 63.3 1.7 97 175-275 121-223 (257)
159 PF12689 Acid_PPase: Acid Phos 96.9 0.00098 2.1E-08 57.4 3.5 139 131-277 3-152 (169)
160 PLN02151 trehalose-phosphatase 96.8 0.0033 7.1E-08 60.2 6.6 52 127-200 94-145 (354)
161 PF05152 DUF705: Protein of un 96.7 0.0026 5.5E-08 58.9 5.2 73 129-227 120-192 (297)
162 TIGR00685 T6PP trehalose-phosp 96.7 0.0034 7.4E-08 56.5 5.9 51 130-201 2-53 (244)
163 PF03031 NIF: NLI interacting 96.7 0.0014 2.9E-08 54.9 3.0 119 132-265 1-121 (159)
164 PRK14501 putative bifunctional 96.6 0.0034 7.3E-08 65.4 6.1 60 129-212 490-550 (726)
165 COG1877 OtsB Trehalose-6-phosp 96.5 0.0047 1E-07 56.9 5.9 61 128-212 15-76 (266)
166 PLN02580 trehalose-phosphatase 96.4 0.0077 1.7E-07 58.3 6.4 60 128-212 116-175 (384)
167 TIGR01522 ATPase-IIA2_Ca golgi 96.4 0.0015 3.3E-08 69.4 1.7 91 172-266 526-633 (884)
168 COG4996 Predicted phosphatase 96.0 0.0069 1.5E-07 50.2 3.6 87 133-226 2-90 (164)
169 PLN02205 alpha,alpha-trehalose 96.0 0.012 2.6E-07 62.5 5.9 50 129-201 594-644 (854)
170 KOG1618 Predicted phosphatase 95.9 0.023 4.9E-07 53.5 7.0 69 129-224 33-107 (389)
171 TIGR02245 HAD_IIID1 HAD-superf 95.9 0.012 2.6E-07 51.9 4.8 70 124-216 14-83 (195)
172 COG2217 ZntA Cation transport 95.9 0.0081 1.8E-07 62.4 4.3 80 172-265 535-614 (713)
173 PRK11033 zntA zinc/cadmium/mer 95.8 0.0065 1.4E-07 63.5 3.1 79 172-266 566-644 (741)
174 COG5663 Uncharacterized conser 95.7 0.0075 1.6E-07 51.8 2.6 128 133-275 8-160 (194)
175 PRK10671 copA copper exporting 95.5 0.0098 2.1E-07 62.9 3.3 81 172-266 648-728 (834)
176 PLN02382 probable sucrose-phos 95.5 0.02 4.2E-07 56.0 5.0 50 128-200 6-55 (413)
177 COG4087 Soluble P-type ATPase 95.5 0.0093 2E-07 49.4 2.3 82 172-266 28-109 (152)
178 TIGR01647 ATPase-IIIA_H plasma 95.3 0.016 3.5E-07 60.8 3.8 90 172-265 440-549 (755)
179 COG3769 Predicted hydrolase (H 95.2 0.022 4.9E-07 51.1 3.9 55 131-212 7-61 (274)
180 TIGR01497 kdpB K+-transporting 95.1 0.018 3.9E-07 59.6 3.6 80 172-265 444-523 (675)
181 PRK14010 potassium-transportin 95.0 0.021 4.4E-07 59.2 3.8 79 172-264 439-517 (673)
182 PF06189 5-nucleotidase: 5'-nu 94.9 0.049 1.1E-06 49.9 5.3 127 129-276 119-258 (264)
183 TIGR01517 ATPase-IIB_Ca plasma 94.8 0.016 3.5E-07 62.1 2.4 90 172-265 577-683 (941)
184 PF02358 Trehalose_PPase: Treh 94.8 0.037 7.9E-07 49.4 4.3 46 135-201 1-47 (235)
185 PF05116 S6PP: Sucrose-6F-phos 94.6 0.013 2.9E-07 53.1 1.0 59 131-218 2-60 (247)
186 TIGR01106 ATPase-IIC_X-K sodiu 94.5 0.03 6.5E-07 60.5 3.6 42 172-216 566-607 (997)
187 PRK01122 potassium-transportin 94.5 0.032 7E-07 57.8 3.6 79 172-264 443-521 (679)
188 COG4229 Predicted enolase-phos 94.5 0.03 6.5E-07 48.9 2.8 93 172-275 101-203 (229)
189 PLN03064 alpha,alpha-trehalose 94.4 0.07 1.5E-06 57.1 6.0 70 129-213 589-659 (934)
190 PRK10517 magnesium-transportin 94.2 0.036 7.8E-07 59.3 3.3 88 172-265 548-652 (902)
191 TIGR01524 ATPase-IIIB_Mg magne 94.1 0.042 9.1E-07 58.5 3.6 89 172-265 513-617 (867)
192 PLN03063 alpha,alpha-trehalose 94.1 0.098 2.1E-06 55.3 6.2 64 129-213 505-569 (797)
193 TIGR01116 ATPase-IIA1_Ca sarco 93.8 0.048 1E-06 58.4 3.4 91 172-266 535-646 (917)
194 PRK15122 magnesium-transportin 93.6 0.057 1.2E-06 57.8 3.4 88 172-265 548-652 (903)
195 PLN02645 phosphoglycolate phos 93.4 0.037 8.1E-07 51.8 1.5 90 182-274 178-273 (311)
196 TIGR01523 ATPase-IID_K-Na pota 93.0 0.047 1E-06 59.3 1.8 90 172-265 644-760 (1053)
197 KOG0207 Cation transport ATPas 92.7 0.18 3.9E-06 53.3 5.4 99 129-264 701-799 (951)
198 TIGR01457 HAD-SF-IIA-hyp2 HAD- 92.6 0.074 1.6E-06 48.1 2.2 94 177-275 124-222 (249)
199 KOG2470 Similar to IMP-GMP spe 91.4 0.31 6.7E-06 46.7 4.9 92 175-266 241-363 (510)
200 TIGR01494 ATPase_P-type ATPase 90.6 0.26 5.6E-06 49.0 3.8 78 172-266 345-422 (499)
201 COG3882 FkbH Predicted enzyme 90.3 2.1 4.6E-05 42.7 9.6 66 127-202 218-283 (574)
202 TIGR01460 HAD-SF-IIA Haloacid 89.6 0.18 3.9E-06 45.2 1.6 90 184-275 138-233 (236)
203 PF13242 Hydrolase_like: HAD-h 89.2 0.041 8.9E-07 40.3 -2.4 44 231-275 3-48 (75)
204 COG0474 MgtA Cation transport 88.9 0.22 4.8E-06 53.5 1.9 90 172-265 545-653 (917)
205 TIGR01657 P-ATPase-V P-type AT 87.9 0.41 8.8E-06 52.2 3.2 30 172-201 654-683 (1054)
206 KOG2134 Polynucleotide kinase 87.9 0.6 1.3E-05 45.2 3.9 60 129-202 73-132 (422)
207 KOG0202 Ca2+ transporting ATPa 87.6 0.62 1.3E-05 49.1 4.0 89 172-264 582-691 (972)
208 KOG1605 TFIIF-interacting CTD 82.2 0.24 5.3E-06 45.6 -1.5 85 127-217 85-174 (262)
209 PF00702 Hydrolase: haloacid d 80.3 0.95 2.1E-05 38.6 1.6 18 132-149 2-19 (215)
210 PF05761 5_nucleotid: 5' nucle 79.1 1.1 2.4E-05 44.4 1.7 98 176-274 185-322 (448)
211 KOG3189 Phosphomannomutase [Li 76.8 5.1 0.00011 35.7 5.0 44 130-200 10-53 (252)
212 TIGR01456 CECR5 HAD-superfamil 74.5 0.98 2.1E-05 42.4 -0.0 44 230-273 231-288 (321)
213 PF10307 DUF2410: Hypothetical 73.0 3.3 7.2E-05 36.6 2.9 89 175-264 55-147 (197)
214 KOG4549 Magnesium-dependent ph 72.5 5.5 0.00012 33.0 3.8 65 130-201 4-71 (144)
215 COG2216 KdpB High-affinity K+ 72.2 4.8 0.0001 40.7 4.1 78 172-264 445-523 (681)
216 PF09949 DUF2183: Uncharacteri 69.5 2 4.4E-05 33.8 0.7 72 192-264 1-79 (100)
217 PRK10444 UMP phosphatase; Prov 67.8 1.5 3.2E-05 39.8 -0.4 46 229-275 171-218 (248)
218 KOG2961 Predicted hydrolase (H 66.3 7.3 0.00016 33.4 3.5 15 130-144 42-56 (190)
219 cd06591 GH31_xylosidase_XylS X 66.0 20 0.00043 33.6 6.8 25 174-198 63-87 (319)
220 COG4502 5'(3')-deoxyribonucleo 64.3 6.6 0.00014 33.2 2.8 54 172-226 66-122 (180)
221 KOG0204 Calcium transporting A 63.4 8.3 0.00018 41.2 3.9 91 171-265 644-753 (1034)
222 PRK10530 pyridoxal phosphate ( 63.0 3.7 8E-05 36.7 1.2 88 174-267 137-232 (272)
223 PF06437 ISN1: IMP-specific 5' 57.6 45 0.00098 32.5 7.5 49 130-202 146-194 (408)
224 COG0647 NagD Predicted sugar p 57.2 2.1 4.5E-05 39.7 -1.5 44 229-273 187-232 (269)
225 cd06595 GH31_xylosidase_XylS-l 55.5 33 0.00071 31.8 6.2 70 117-199 27-96 (292)
226 KOG2882 p-Nitrophenyl phosphat 52.7 15 0.00032 34.6 3.3 91 177-271 168-264 (306)
227 PF05822 UMPH-1: Pyrimidine 5' 52.7 12 0.00027 34.1 2.8 56 159-217 75-130 (246)
228 PLN02177 glycerol-3-phosphate 50.6 9.5 0.00021 38.4 1.8 37 175-218 111-148 (497)
229 COG5610 Predicted hydrolase (H 50.3 9.2 0.0002 38.2 1.6 95 174-271 99-197 (635)
230 cd05008 SIS_GlmS_GlmD_1 SIS (S 48.8 24 0.00051 27.6 3.6 27 175-201 58-84 (126)
231 COG2044 Predicted peroxiredoxi 48.7 29 0.00062 28.3 4.0 53 130-201 34-86 (120)
232 PLN02499 glycerol-3-phosphate 48.3 10 0.00022 38.1 1.7 33 182-218 101-134 (498)
233 cd05014 SIS_Kpsf KpsF-like pro 48.3 24 0.00053 27.6 3.6 28 174-201 58-85 (128)
234 PF10137 TIR-like: Predicted n 47.4 11 0.00025 30.7 1.5 27 192-218 1-27 (125)
235 PF04312 DUF460: Protein of un 46.4 23 0.0005 29.6 3.2 52 133-212 45-96 (138)
236 PF01380 SIS: SIS domain SIS d 46.0 30 0.00066 26.9 3.8 27 175-201 65-91 (131)
237 PRK13762 tRNA-modifying enzyme 46.0 75 0.0016 30.0 7.1 29 172-200 140-168 (322)
238 COG1222 RPT1 ATP-dependent 26S 45.6 23 0.00049 34.4 3.5 71 109-202 228-302 (406)
239 KOG1344 Predicted histone deac 44.1 79 0.0017 29.0 6.4 100 92-216 218-322 (324)
240 cd05013 SIS_RpiR RpiR-like pro 43.9 30 0.00065 26.9 3.5 25 177-201 74-98 (139)
241 cd06603 GH31_GANC_GANAB_alpha 43.7 45 0.00098 31.5 5.2 25 174-198 61-85 (339)
242 TIGR01487 SPP-like sucrose-pho 42.9 12 0.00026 32.4 1.1 26 252-277 165-190 (215)
243 cd05710 SIS_1 A subgroup of th 42.9 34 0.00073 27.0 3.6 27 175-201 59-85 (120)
244 COG0731 Fe-S oxidoreductases [ 42.5 29 0.00063 32.6 3.6 30 171-200 89-119 (296)
245 cd06601 GH31_lyase_GLase GLase 41.9 61 0.0013 30.8 5.8 25 174-198 61-85 (332)
246 cd06416 GH25_Lys1-like Lys-1 i 41.3 52 0.0011 28.3 4.9 68 111-201 67-134 (196)
247 TIGR03127 RuMP_HxlB 6-phospho 41.1 34 0.00074 28.8 3.6 28 174-201 83-110 (179)
248 KOG0203 Na+/K+ ATPase, alpha s 40.2 99 0.0021 33.4 7.3 31 172-202 588-618 (1019)
249 cd06600 GH31_MGAM-like This fa 39.5 61 0.0013 30.4 5.3 24 175-198 62-85 (317)
250 KOG0323 TFIIF-interacting CTD 39.2 34 0.00073 35.5 3.8 139 89-228 99-254 (635)
251 cd06598 GH31_transferase_CtsZ 39.1 1.1E+02 0.0024 28.6 7.1 25 174-198 67-91 (317)
252 PRK00192 mannosyl-3-phosphogly 38.7 12 0.00027 33.8 0.6 17 251-267 208-224 (273)
253 PF01740 STAS: STAS domain; I 38.1 23 0.00049 27.4 1.9 57 131-219 48-104 (117)
254 COG1501 Alpha-glucosidases, fa 37.9 93 0.002 33.2 6.9 44 173-216 317-360 (772)
255 cd05017 SIS_PGI_PMI_1 The memb 37.5 42 0.00091 26.4 3.4 27 174-200 54-80 (119)
256 cd05006 SIS_GmhA Phosphoheptos 36.9 44 0.00095 28.2 3.6 28 174-201 112-139 (177)
257 PF09198 T4-Gluco-transf: Bact 35.9 16 0.00035 23.1 0.6 13 81-93 10-22 (38)
258 TIGR00441 gmhA phosphoheptose 35.6 49 0.0011 27.4 3.6 27 175-201 91-117 (154)
259 PF13701 DDE_Tnp_1_4: Transpos 35.3 35 0.00075 33.8 3.1 18 129-146 137-154 (448)
260 PRK13937 phosphoheptose isomer 35.1 47 0.001 28.5 3.6 27 175-201 118-144 (188)
261 PF08139 LPAM_1: Prokaryotic m 34.6 35 0.00076 20.1 1.8 12 12-23 13-24 (25)
262 TIGR02463 MPGP_rel mannosyl-3- 34.4 20 0.00044 31.0 1.2 25 251-275 196-220 (221)
263 cd05005 SIS_PHI Hexulose-6-pho 34.2 51 0.0011 27.8 3.6 29 173-201 85-113 (179)
264 COG4594 FecB ABC-type Fe3+-cit 34.0 30 0.00066 32.1 2.2 26 1-26 1-26 (310)
265 PF09680 Tiny_TM_bacill: Prote 33.8 31 0.00068 20.1 1.5 16 7-22 8-23 (24)
266 TIGR02886 spore_II_AA anti-sig 33.2 65 0.0014 24.4 3.8 41 175-220 56-96 (106)
267 TIGR02468 sucrsPsyn_pln sucros 32.4 50 0.0011 36.4 3.9 38 177-217 787-828 (1050)
268 cd06599 GH31_glycosidase_Aec37 32.4 1.9E+02 0.004 27.1 7.4 25 174-198 70-94 (317)
269 cd07043 STAS_anti-anti-sigma_f 32.1 77 0.0017 23.1 3.9 40 174-218 54-93 (99)
270 cd04795 SIS SIS domain. SIS (S 32.1 55 0.0012 23.4 3.1 22 176-197 60-81 (87)
271 PF02142 MGS: MGS-like domain 31.9 47 0.001 25.1 2.8 32 178-217 1-32 (95)
272 KOG3040 Predicted sugar phosph 31.8 8 0.00017 34.8 -1.8 43 230-273 179-223 (262)
273 smart00851 MGS MGS-like domain 31.7 49 0.0011 24.7 2.8 32 179-218 2-33 (90)
274 cd06592 GH31_glucosidase_KIAA1 31.7 1.1E+02 0.0025 28.3 5.8 24 175-198 68-91 (303)
275 COG1184 GCD2 Translation initi 31.4 52 0.0011 31.0 3.4 42 177-218 130-173 (301)
276 TIGR00377 ant_ant_sig anti-ant 31.2 1.1E+02 0.0023 23.1 4.7 59 130-220 42-100 (108)
277 PF00578 AhpC-TSA: AhpC/TSA fa 31.2 56 0.0012 25.0 3.2 40 175-217 44-83 (124)
278 cd06604 GH31_glucosidase_II_Ma 30.4 1E+02 0.0022 29.0 5.3 24 175-198 62-85 (339)
279 TIGR02109 PQQ_syn_pqqE coenzym 30.0 69 0.0015 30.1 4.1 42 175-217 66-107 (358)
280 PF03033 Glyco_transf_28: Glyc 29.9 76 0.0017 24.9 3.8 36 177-218 13-48 (139)
281 smart00266 CAD Domains present 29.2 27 0.00059 26.0 0.9 21 131-151 38-58 (74)
282 TIGR03757 conj_TIGR03757 integ 29.0 73 0.0016 25.7 3.4 50 87-137 41-91 (113)
283 COG1817 Uncharacterized protei 28.8 53 0.0011 31.4 2.9 48 167-218 4-51 (346)
284 COG2344 AT-rich DNA-binding pr 28.6 52 0.0011 29.2 2.7 44 174-218 130-173 (211)
285 PF07511 DUF1525: Protein of u 28.5 73 0.0016 25.7 3.4 50 87-137 40-90 (114)
286 cd06539 CIDE_N_A CIDE_N domain 28.5 29 0.00062 26.2 1.0 22 130-151 39-60 (78)
287 cd00532 MGS-like MGS-like doma 28.5 71 0.0015 25.0 3.3 35 176-218 11-45 (112)
288 KOG0652 26S proteasome regulat 28.2 68 0.0015 30.2 3.5 73 106-201 245-321 (424)
289 cd06589 GH31 The enzymes of gl 27.8 1.6E+02 0.0034 26.7 5.9 26 175-200 64-89 (265)
290 cd06525 GH25_Lyc-like Lyc mura 27.8 72 0.0016 27.2 3.5 62 112-200 65-127 (184)
291 TIGR01691 enolase-ppase 2,3-di 27.6 34 0.00074 30.5 1.5 14 132-145 2-15 (220)
292 PRK13938 phosphoheptose isomer 27.1 79 0.0017 27.7 3.7 27 175-201 125-151 (196)
293 TIGR01652 ATPase-Plipid phosph 27.0 51 0.0011 36.2 3.0 30 172-201 629-658 (1057)
294 PRK00994 F420-dependent methyl 27.0 69 0.0015 29.4 3.3 45 171-218 68-112 (277)
295 cd06415 GH25_Cpl1-like Cpl-1 l 26.9 95 0.0021 26.8 4.1 65 110-200 66-131 (196)
296 cd07041 STAS_RsbR_RsbS_like Su 26.6 96 0.0021 23.6 3.7 39 175-218 58-96 (109)
297 cd06593 GH31_xylosidase_YicI Y 26.3 2.6E+02 0.0056 25.8 7.2 25 174-198 63-87 (308)
298 PRK10658 putative alpha-glucos 26.2 1.8E+02 0.0039 30.4 6.6 26 174-199 322-347 (665)
299 cd06523 GH25_PlyB-like PlyB is 25.8 1.5E+02 0.0033 25.1 5.2 59 110-200 66-125 (177)
300 PRK02261 methylaspartate mutas 25.8 1.2E+02 0.0025 24.9 4.3 81 179-263 43-126 (137)
301 PRK05301 pyrroloquinoline quin 25.5 92 0.002 29.6 4.1 42 175-217 75-116 (378)
302 PF13580 SIS_2: SIS domain; PD 25.3 75 0.0016 25.7 3.0 22 177-198 117-138 (138)
303 cd06536 CIDE_N_ICAD CIDE_N dom 25.3 43 0.00094 25.3 1.4 23 129-151 40-62 (80)
304 cd06537 CIDE_N_B CIDE_N domain 25.3 42 0.00091 25.5 1.3 22 130-151 38-59 (81)
305 PRK10886 DnaA initiator-associ 25.0 91 0.002 27.3 3.7 26 176-201 122-147 (196)
306 PRK13936 phosphoheptose isomer 24.9 91 0.002 27.0 3.6 26 176-201 124-149 (197)
307 PTZ00459 mucin-associated surf 24.7 37 0.00079 31.8 1.2 15 1-15 4-18 (291)
308 PRK00414 gmhA phosphoheptose i 24.5 92 0.002 26.9 3.6 27 175-201 123-149 (192)
309 PF01055 Glyco_hydro_31: Glyco 24.5 2.4E+02 0.0051 27.4 6.8 25 174-198 80-104 (441)
310 cd01615 CIDE_N CIDE_N domain, 24.4 77 0.0017 23.9 2.6 23 129-151 38-60 (78)
311 KOG3128 Uncharacterized conser 24.4 54 0.0012 30.4 2.1 54 158-214 122-175 (298)
312 cd06538 CIDE_N_FSP27 CIDE_N do 24.1 34 0.00074 25.8 0.7 21 131-151 39-59 (79)
313 PHA03072 putative viral membra 23.8 1.3E+02 0.0028 26.2 4.2 47 165-220 130-176 (190)
314 KOG2599 Pyridoxal/pyridoxine/p 23.3 1.5E+02 0.0034 27.7 4.9 107 77-200 73-190 (308)
315 cd06414 GH25_LytC-like The Lyt 23.2 1.1E+02 0.0024 26.2 3.8 68 110-200 69-136 (191)
316 cd01421 IMPCH Inosine monophos 23.2 79 0.0017 27.7 2.9 35 176-218 10-44 (187)
317 PF03356 Pox_LP_H2: Viral late 22.3 1.4E+02 0.003 26.0 4.1 47 165-220 130-176 (189)
318 cd02072 Glm_B12_BD B12 binding 22.0 1.2E+02 0.0027 24.8 3.6 81 179-263 39-122 (128)
319 PRK01045 ispH 4-hydroxy-3-meth 21.8 91 0.002 29.3 3.2 76 181-260 44-123 (298)
320 cd03012 TlpA_like_DipZ_like Tl 21.4 82 0.0018 24.7 2.5 43 175-217 41-86 (126)
321 PRK02947 hypothetical protein; 21.3 1E+02 0.0022 27.8 3.4 26 176-201 119-144 (246)
322 cd01994 Alpha_ANH_like_IV This 21.3 93 0.002 27.1 3.0 49 177-225 75-124 (194)
323 PF01993 MTD: methylene-5,6,7, 21.0 1.5E+02 0.0032 27.3 4.2 45 171-218 67-111 (276)
324 PF05221 AdoHcyase: S-adenosyl 20.9 1.3E+02 0.0028 28.0 3.8 42 177-218 54-95 (268)
325 COG0279 GmhA Phosphoheptose is 20.6 1.2E+02 0.0026 26.3 3.4 28 175-202 121-148 (176)
326 PRK11337 DNA-binding transcrip 20.4 1.2E+02 0.0025 27.7 3.6 28 174-201 198-225 (292)
327 TIGR02495 NrdG2 anaerobic ribo 20.4 1.6E+02 0.0035 24.7 4.3 26 175-200 75-100 (191)
328 TIGR01501 MthylAspMutase methy 20.4 1.7E+02 0.0036 24.2 4.1 83 178-264 40-125 (134)
329 PLN03190 aminophospholipid tra 20.4 1.1E+02 0.0024 34.2 3.9 30 172-201 724-753 (1178)
330 PF13439 Glyco_transf_4: Glyco 20.3 1.3E+02 0.0028 23.7 3.5 25 179-203 18-42 (177)
331 cd03018 PRX_AhpE_like Peroxire 20.2 1.2E+02 0.0025 24.2 3.2 40 175-217 47-86 (149)
No 1
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=100.00 E-value=1.3e-71 Score=496.49 Aligned_cols=217 Identities=56% Similarity=1.007 Sum_probs=211.2
Q ss_pred CcccccceeeeeeeccccccccchhhhhhhhhhccccccccchhhhHhHHHHHHhhhhhccCCCceeEEEecccccccCC
Q 023352 67 PGLSCLSWRLGVETNNVIGWATVPEKCAGYVGHYMLGQQYRMDSEVVANEAILYAQSLKLAGDGKNIWVFDIDETSLSNL 146 (283)
Q Consensus 67 ~~~~c~sw~l~vE~~n~~~~~~~p~~c~~~v~~y~~~~~Y~~D~~~v~~~a~~y~~~~~~~~~~~~avVFDIDgTLldn~ 146 (283)
+.+||.||||+||+||+++|+|||++|++||++||+|+||++|+++|+++|..|++++++.+++++|||||||+|+|||+
T Consensus 13 ~~~~c~swr~~ve~~n~~~~~~vp~~c~~~v~~Y~~~~~Y~~D~~~v~~~a~~y~~~~~~~~dg~~A~V~DIDET~LsN~ 92 (229)
T TIGR01675 13 DYAYCRSWRLGVETNNIRDWDTVPAECKDYVEDYMTSKQYKRDVKRVVDEAYFYAKSLALSGDGMDAWIFDVDDTLLSNI 92 (229)
T ss_pred CcCcchhhhhhhhhccccccccCcHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHhhccCCCCcEEEEccccccccCH
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcc
Q 023352 147 PYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKG 226 (283)
Q Consensus 147 ~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~ 226 (283)
||+..++||+++|+++.|++|+..+++|++|++++++++|+++|++|+|+|||++.+|+.|.+||+++||+.|++|+||+
T Consensus 93 py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~ 172 (229)
T TIGR01675 93 PYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRG 172 (229)
T ss_pred HHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCceeEEeechhhhHhhhhCceEeccCccchhhhccCccCCccccCCCCccccC
Q 023352 227 SSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGTNAGNRTFKLPDPMYYIG 283 (283)
Q Consensus 227 ~~~~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~ga~ag~r~fkLPNp~Y~~~ 283 (283)
.++.++++..||+..|++++++||+|+++|||||+||.|+++|.|+|||||||||||
T Consensus 173 ~~d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~G~~~~~RtFKLPNPmYyi~ 229 (229)
T TIGR01675 173 LEDSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLLGSPPGRRTFKLPNPMYYVP 229 (229)
T ss_pred CCCCCchHhHHHHHHHHHHHhCCceEEEEECCChHHhcCCCccCceeeCCCCcccCC
Confidence 777777788999999999999999999999999999999999999999999999997
No 2
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=100.00 E-value=5e-70 Score=494.09 Aligned_cols=229 Identities=48% Similarity=0.904 Sum_probs=214.3
Q ss_pred ceeeeccccCCCCC-CCCcccccceeeeeeeccccccccchhhhhhhhhhccccccccchhhhHhHHHHHHhhhhhccCC
Q 023352 51 QIHLLRPKAGSRNN-DVPGLSCLSWRLGVETNNVIGWATVPEKCAGYVGHYMLGQQYRMDSEVVANEAILYAQSLKLAGD 129 (283)
Q Consensus 51 ~~~~~~~~~~~~~~-~~~~~~c~sw~l~vE~~n~~~~~~~p~~c~~~v~~y~~~~~Y~~D~~~v~~~a~~y~~~~~~~~~ 129 (283)
+++.|++.++.+++ ..+++||.|||++||+||+++|+|||++|++||++||+||||++|+++|+++|+.|+++++. +
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~c~swr~~vE~~n~~~w~~vP~~C~~~v~~Y~~ggqY~~D~~~v~~~a~~y~~~~~~--~ 99 (275)
T TIGR01680 22 DMFPLRMNTGYGAGARDPEVKCASWRLAVEAHNIFGFETIPEECVDATAEYIEGEQYRSDSKTVNQQAYFFARDLEV--H 99 (275)
T ss_pred hhhcccccccccccccCCCCcccceeeeeeecccCCcccCcHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhCcC--C
Confidence 38889999887654 45799999999999999999999999999999999999999999999999999999988875 3
Q ss_pred CceeEEEecccccccCCccccccCCCcccCCchhhh-hhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccH
Q 023352 130 GKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFN-EWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTE 208 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~-~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~ 208 (283)
+++|||||||||+|||+||+..++||.++|+++.|+ +|+..+.+|++|++++|+++++++|++|+|+|||++.+|+.|+
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~ 179 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTE 179 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH
Confidence 689999999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred hhhhhccchhhhhhhhcccCC-CCceeEEeechhhhHhhhhCceEeccCccchhhhccCccC-CccccCCCCccc
Q 023352 209 ANLKHAGFDTWEKLILKGSSH-SGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGTNAG-NRTFKLPDPMYY 281 (283)
Q Consensus 209 ~~L~~~G~~~~~~lilr~~~~-~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~ga~ag-~r~fkLPNp~Y~ 281 (283)
+||+++||+.|++|+||+.++ .++++..||+..|++++++||+|+++|||||+||.|++.| .|+||||||||-
T Consensus 180 ~NL~kaGy~~~~~LiLR~~~D~~~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl~G~~~g~~RtFKLPNP~~~ 254 (275)
T TIGR01680 180 ANLKKAGYHTWEKLILKDPQDNSAENAVEYKTAARAKLIQEGYNIVGIIGDQWNDLKGEHRGAIRSFKLPNPCTT 254 (275)
T ss_pred HHHHHcCCCCcceeeecCCCCCccchhHHHHHHHHHHHHHcCceEEEEECCCHHhccCCCccCcceecCCCcccc
Confidence 999999999999999998754 4566778999999999999999999999999999999875 799999999763
No 3
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=100.00 E-value=4.7e-53 Score=379.04 Aligned_cols=212 Identities=49% Similarity=0.808 Sum_probs=184.9
Q ss_pred CcccccceeeeeeeccccccccchhhhhhhhhhccccccccchhhhHhHHHHHHhhhhhccCCCceeEEEecccccccCC
Q 023352 67 PGLSCLSWRLGVETNNVIGWATVPEKCAGYVGHYMLGQQYRMDSEVVANEAILYAQSLKLAGDGKNIWVFDIDETSLSNL 146 (283)
Q Consensus 67 ~~~~c~sw~l~vE~~n~~~~~~~p~~c~~~v~~y~~~~~Y~~D~~~v~~~a~~y~~~~~~~~~~~~avVFDIDgTLldn~ 146 (283)
...+|.||+++||+|| .+|.+ ++|+.|+.+ |+++||.+|+++++.+|+.|++.....+++++|||||||||+|||.
T Consensus 12 ~~~~c~s~~~~~e~~~-~~~~~--~~~~~~~~~-~~~~q~~~e~~a~~~~a~~~a~~~~~~~~~~~avv~DIDeTvLsn~ 87 (229)
T PF03767_consen 12 AALYCASWRLAVETNN-ANWTV--AECVEYVAD-VTWGQYSAEYKALVDQAYNYAKSRLDEADKPPAVVFDIDETVLSNS 87 (229)
T ss_dssp ------TCCSSHHHHH-----H--HHHHHTTHH-HHHHHHEHHHHHHHHHHHHHHHHHHHHHTSEEEEEEESBTTTEEHH
T ss_pred HHhhhhhccchhhhcc-hHHHH--HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHhccCCCcEEEEECCcccccCH
Confidence 6889999999999999 99976 999999999 9999999999999999999999888777999999999999999999
Q ss_pred ccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcc
Q 023352 147 PYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKG 226 (283)
Q Consensus 147 ~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~ 226 (283)
+|+..+.++...|+++.|++|+..+..+++||+++|+++++++|++|+|||||++.+|+.|++||+++||+.|++++|++
T Consensus 88 ~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~ 167 (229)
T PF03767_consen 88 PYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRP 167 (229)
T ss_dssp HHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEE
T ss_pred HHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhcccc
Confidence 99888888888999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCC-CCceeEEeechhhhHhhhhCceEeccCccchhhhcc----CccCCccccCCCCcccc
Q 023352 227 SSH-SGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLG----TNAGNRTFKLPDPMYYI 282 (283)
Q Consensus 227 ~~~-~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~g----a~ag~r~fkLPNp~Y~~ 282 (283)
..+ .+++...||+..|.++++.||+|+++||||++||.| +..+.|+|+|||||||+
T Consensus 168 ~~~~~~~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~~~~~~~~~~r~f~lPNp~Yg~ 228 (229)
T PF03767_consen 168 DKDPSKKSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSGAKTAGARAERWFKLPNPMYGS 228 (229)
T ss_dssp ESSTSS------SHHHHHHHHHTTEEEEEEEESSGGGCHCTHHHHHHHTTEEE-TTSSSSH
T ss_pred ccccccccccccchHHHHHHHHcCCcEEEEeCCCHHHhhcccccccccceEEEcCCCCCCC
Confidence 776 556778999999999999999999999999999999 55579999999999985
No 4
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=99.97 E-value=1.7e-31 Score=243.98 Aligned_cols=177 Identities=31% Similarity=0.458 Sum_probs=149.5
Q ss_pred hhhccccccccchhhhHhHHHHHHhhhhh-ccCCCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCC
Q 023352 97 VGHYMLGQQYRMDSEVVANEAILYAQSLK-LAGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPP 175 (283)
Q Consensus 97 v~~y~~~~~Y~~D~~~v~~~a~~y~~~~~-~~~~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ 175 (283)
+.-|..++.|+.....+.+.|..+++... ...++++|||||||||+|||+||+..+.+++.+|+++.|++|+.....++
T Consensus 40 ~~w~q~S~Ey~al~~q~~n~A~~~~~~~~~~~~~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ 119 (266)
T TIGR01533 40 VAWMQRSAEYKALYLQAYNLAKMRLDNNLKKVKDKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKP 119 (266)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCc
Confidence 45677889999988888888888775443 33578999999999999999999888778888899999999999999999
Q ss_pred ChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhh--hhhhhcccCCCCceeEEeechhhhHhhhhCceEe
Q 023352 176 LPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTW--EKLILKGSSHSGETAVVYKSSERKKLEMKGYRII 253 (283)
Q Consensus 176 ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~--~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~iv 253 (283)
+||+.+++++|+++|++++|+|||++..++.|..+|+++|++.+ +.+++++.. . .|...|..+. ++|+|+
T Consensus 120 ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~-~------~K~~rr~~I~-~~y~Iv 191 (266)
T TIGR01533 120 VAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDK-S------SKESRRQKVQ-KDYEIV 191 (266)
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCC-C------CcHHHHHHHH-hcCCEE
Confidence 99999999999999999999999999889999999999999864 467777532 2 3556666665 689999
Q ss_pred ccCccchhhhccCc-------------------cCCccccCCCCccc
Q 023352 254 GNIGDQWSDLLGTN-------------------AGNRTFKLPDPMYY 281 (283)
Q Consensus 254 ~~IGDq~sDl~ga~-------------------ag~r~fkLPNp~Y~ 281 (283)
++|||+++||.+.. .|.+.|.||||||.
T Consensus 192 l~vGD~~~Df~~~~~~~~~~~~r~~~v~~~~~~fG~~~i~lPNp~YG 238 (266)
T TIGR01533 192 LLFGDNLLDFDDFFYKDKESQDRQALVLQNQEKFGKKFIILPNPMYG 238 (266)
T ss_pred EEECCCHHHhhhhhccCcchHHHHHHHHHHHHHhCCCeEEecCCCCc
Confidence 99999999997641 25667999999995
No 5
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=99.93 E-value=7e-26 Score=200.82 Aligned_cols=165 Identities=26% Similarity=0.415 Sum_probs=134.2
Q ss_pred hhhhHhHHHHHHhh-----hhhccCCCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHH
Q 023352 109 DSEVVANEAILYAQ-----SLKLAGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLY 183 (283)
Q Consensus 109 D~~~v~~~a~~y~~-----~~~~~~~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl 183 (283)
+..++.-|++.-++ ..++..++++|||+|||||+|||+||-.-....+.+|+|+.|++|+....+.++||+.||+
T Consensus 52 E~~AL~~Q~yn~Ak~~~d~~~k~~k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl 131 (274)
T COG2503 52 EYQALYLQAYNSAKIALDTQAKKKKGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFL 131 (274)
T ss_pred HHHHHHHHHhhhHHHHHHhhhccccCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHH
Confidence 44556667766653 4566677888999999999999999987766667889999999999999999999999999
Q ss_pred HHHHHcCeEEEEEeCCCccc-ccccHhhhhhccchhh--hhhhhcccCCCCceeEEeechhhhHhhhhCceEeccCccch
Q 023352 184 KKLLLLGIKIVFLTGRPEDQ-RNVTEANLKHAGFDTW--EKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQW 260 (283)
Q Consensus 184 ~~L~~~GikI~ivTgR~e~~-r~~T~~~L~~~G~~~~--~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~ 260 (283)
++.-++|.+|+|+|||..+. ...|.++|++.|++.- .++++..+ .+. |+..|+. .+.+|.|++.|||+.
T Consensus 132 ~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk~-~k~------Ke~R~~~-v~k~~~iVm~vGDNl 203 (274)
T COG2503 132 NYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKKD-KKS------KEVRRQA-VEKDYKIVMLVGDNL 203 (274)
T ss_pred HHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEeeC-CCc------HHHHHHH-HhhccceeeEecCch
Confidence 99999999999999999877 8899999999999973 34555522 122 3444544 456999999999999
Q ss_pred hhhccCc------------------cCCccccCCCCccc
Q 023352 261 SDLLGTN------------------AGNRTFKLPDPMYY 281 (283)
Q Consensus 261 sDl~ga~------------------ag~r~fkLPNp~Y~ 281 (283)
.||.... .|.+.+.+|||||.
T Consensus 204 ~DF~d~~~k~~~~eR~Alv~~~~~~FGk~~Ii~pN~~YG 242 (274)
T COG2503 204 DDFGDNAYKKAEAERRALVKQNQKKFGKKFIILPNSMYG 242 (274)
T ss_pred hhhcchhhhhhhHHHHHHHHHHHHHhCceEEEecCCccC
Confidence 9997541 26677899999995
No 6
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.85 E-value=8.1e-22 Score=177.68 Aligned_cols=143 Identities=24% Similarity=0.339 Sum_probs=106.7
Q ss_pred CCceeEEEecccccccCCc--cccccCCC--cccC--Cchhhhhhhhc--CCCCCChhhHHHHHHHHHcCeEEEEEeCCC
Q 023352 129 DGKNIWVFDIDETSLSNLP--YYAKNGFG--VKPY--NPTLFNEWVNT--GKAPPLPESLKLYKKLLLLGIKIVFLTGRP 200 (283)
Q Consensus 129 ~~~~avVFDIDgTLldn~~--y~~~~~~g--~~~~--~~~~~~~~~~~--~~~~~ipga~eLl~~L~~~GikI~ivTgR~ 200 (283)
.+|.+|+||||||++||+| |+.++.|+ ..+| +++.|+.|... ..+.+.||++++|++|+++|++|+|||||+
T Consensus 61 ~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~ 140 (237)
T PRK11009 61 RPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRT 140 (237)
T ss_pred CCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3455999999999999988 45555563 3446 33446666653 346788889999999999999999999999
Q ss_pred cccccccHhhhhh-ccc--hhhhhhhhcccCCCCceeEEeechhhhHhhhhCceEeccCccchhhhccC-ccCC---ccc
Q 023352 201 EDQRNVTEANLKH-AGF--DTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGT-NAGN---RTF 273 (283)
Q Consensus 201 e~~r~~T~~~L~~-~G~--~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~ga-~ag~---r~f 273 (283)
+..++.|.++|.+ +|+ ..++.+++.++. ..| ...+..+++ +.++++|||+++|+.++ .+|+ +++
T Consensus 141 ~~k~~~t~~~Llk~~gip~~~~f~vil~gd~-~~K------~~K~~~l~~--~~i~I~IGDs~~Di~aA~~AGi~~I~v~ 211 (237)
T PRK11009 141 ATKTETVSKTLADDFHIPADNMNPVIFAGDK-PGQ------YTKTQWLKK--KNIRIFYGDSDNDITAAREAGARGIRIL 211 (237)
T ss_pred CcccHHHHHHHHHHcCCCcccceeEEEcCCC-CCC------CCHHHHHHh--cCCeEEEcCCHHHHHHHHHcCCcEEEEe
Confidence 8878889999886 899 455677766543 223 333455554 45678999999999988 4554 566
Q ss_pred cCCCCcc
Q 023352 274 KLPDPMY 280 (283)
Q Consensus 274 kLPNp~Y 280 (283)
.-+||+|
T Consensus 212 ~G~~~~~ 218 (237)
T PRK11009 212 RAANSTY 218 (237)
T ss_pred cCCCCCC
Confidence 7799998
No 7
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.77 E-value=4e-19 Score=160.24 Aligned_cols=137 Identities=23% Similarity=0.276 Sum_probs=99.6
Q ss_pred CCCceeEEEecccccccCCccccccCCCcccC---------CchhhhhhhhcCCC--CCChhhHHHHHHHHHcCeEEEEE
Q 023352 128 GDGKNIWVFDIDETSLSNLPYYAKNGFGVKPY---------NPTLFNEWVNTGKA--PPLPESLKLYKKLLLLGIKIVFL 196 (283)
Q Consensus 128 ~~~~~avVFDIDgTLldn~~y~~~~~~g~~~~---------~~~~~~~~~~~~~~--~~ipga~eLl~~L~~~GikI~iv 196 (283)
+.+|.+|+|||||||+||.|++ . +|...+ ++..|+.|...... .+.+++.++|++|+++|++++|+
T Consensus 60 ~~~p~aViFDlDgTLlDSs~~~-~--~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iV 136 (237)
T TIGR01672 60 GRPPIAVSFDIDDTVLFSSPGF-W--RGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFV 136 (237)
T ss_pred CCCCeEEEEeCCCccccCcHHH-h--CCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEE
Confidence 3445599999999999999976 2 332222 34668999877654 45555999999999999999999
Q ss_pred eCCCcccccccHhhh-hhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhCceEeccCccchhhhccC-ccCCccc
Q 023352 197 TGRPEDQRNVTEANL-KHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGT-NAGNRTF 273 (283)
Q Consensus 197 TgR~e~~r~~T~~~L-~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~ga-~ag~r~f 273 (283)
|||.+..++.+.++| +.+|++.++.++++++. ..+||++ +..+++ +.++++|||+.+|+.++ ++|++++
T Consensus 137 Tnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~------~~~l~~--~~i~i~vGDs~~DI~aAk~AGi~~I 208 (237)
T TIGR01672 137 TGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTK------TQWIQD--KNIRIHYGDSDNDITAAKEAGARGI 208 (237)
T ss_pred eCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCH------HHHHHh--CCCeEEEeCCHHHHHHHHHCCCCEE
Confidence 999765455555555 56899988888777654 3345432 334443 45679999999999988 6787765
Q ss_pred cC
Q 023352 274 KL 275 (283)
Q Consensus 274 kL 275 (283)
.+
T Consensus 209 ~V 210 (237)
T TIGR01672 209 RI 210 (237)
T ss_pred EE
Confidence 44
No 8
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.57 E-value=1.9e-15 Score=134.73 Aligned_cols=102 Identities=21% Similarity=0.261 Sum_probs=83.8
Q ss_pred CCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhC
Q 023352 171 GKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKG 249 (283)
Q Consensus 171 ~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~g 249 (283)
...+++||+.++++.|+++|+++++.|+++ +..+...|...|+..++..++.+++ .++||+|..+ +...+..|
T Consensus 83 ~~~~~~pGv~~~l~~L~~~~i~~avaS~s~---~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~y---L~Aa~~Lg 156 (221)
T COG0637 83 EGLKPIPGVVELLEQLKARGIPLAVASSSP---RRAAERVLARLGLLDYFDVIVTADDVARGKPAPDIY---LLAAERLG 156 (221)
T ss_pred cCCCCCccHHHHHHHHHhcCCcEEEecCCh---HHHHHHHHHHccChhhcchhccHHHHhcCCCCCHHH---HHHHHHcC
Confidence 457999999999999999999999999998 7788999999999988887777554 5789999543 23333322
Q ss_pred --ceEeccCccchhhhccC-ccCCccccCCCC
Q 023352 250 --YRIIGNIGDQWSDLLGT-NAGNRTFKLPDP 278 (283)
Q Consensus 250 --y~iv~~IGDq~sDl~ga-~ag~r~fkLPNp 278 (283)
-..|+.|+|++++++++ .+|+++|.++++
T Consensus 157 v~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~ 188 (221)
T COG0637 157 VDPEECVVVEDSPAGIQAAKAAGMRVVGVPAG 188 (221)
T ss_pred CChHHeEEEecchhHHHHHHHCCCEEEEecCC
Confidence 24589999999999999 689999999984
No 9
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.52 E-value=8.9e-15 Score=129.95 Aligned_cols=95 Identities=22% Similarity=0.254 Sum_probs=75.7
Q ss_pred CCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhccc-CCCCceeEEeechhhhHhhhhCce
Q 023352 173 APPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGS-SHSGETAVVYKSSERKKLEMKGYR 251 (283)
Q Consensus 173 ~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~KP~~~yK~~~r~~l~~~gy~ 251 (283)
..++||+.++|..|+++|++++++||++ +..+...|+++|+..++..+...+ ....||+|... ...+.+.|..
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~---~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l---~~~~~~~~~~ 161 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKP---ERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPL---LLLLEKLGLD 161 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCc---HHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHH---HHHHHHhCCC
Confidence 5799999999999999999999999999 667888899999999998888744 35778888443 3333333444
Q ss_pred --EeccCccchhhhccC-ccCCccc
Q 023352 252 --IIGNIGDQWSDLLGT-NAGNRTF 273 (283)
Q Consensus 252 --iv~~IGDq~sDl~ga-~ag~r~f 273 (283)
.+++|||+.+|+.++ ++|..++
T Consensus 162 ~~~~l~VGDs~~Di~aA~~Ag~~~v 186 (220)
T COG0546 162 PEEALMVGDSLNDILAAKAAGVPAV 186 (220)
T ss_pred hhheEEECCCHHHHHHHHHcCCCEE
Confidence 689999999999998 5565544
No 10
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.52 E-value=3.5e-15 Score=133.10 Aligned_cols=102 Identities=19% Similarity=0.176 Sum_probs=76.2
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhCc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKGY 250 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~gy 250 (283)
...++||+.++|+.|+++|++++++||.+ +......|+..|+..+++.++.+++ ..+||+|.... ..+++.|.
T Consensus 91 ~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~---~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~---~~~~~~~~ 164 (224)
T PRK14988 91 RAVLREDTVPFLEALKASGKRRILLTNAH---PHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQ---AVAEHTGL 164 (224)
T ss_pred cCCcCCCHHHHHHHHHhCCCeEEEEeCcC---HHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHH---HHHHHcCC
Confidence 36789999999999999999999999987 4556667888899888776666543 56788874332 22222232
Q ss_pred --eEeccCccchhhhccC-ccCCcc-ccCCCCc
Q 023352 251 --RIIGNIGDQWSDLLGT-NAGNRT-FKLPDPM 279 (283)
Q Consensus 251 --~iv~~IGDq~sDl~ga-~ag~r~-fkLPNp~ 279 (283)
..+++|||+.+|+.+| .+|+++ +.++||-
T Consensus 165 ~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~ 197 (224)
T PRK14988 165 KAERTLFIDDSEPILDAAAQFGIRYCLGVTNPD 197 (224)
T ss_pred ChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCC
Confidence 3489999999999998 668874 5566653
No 11
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.51 E-value=5.5e-15 Score=133.54 Aligned_cols=100 Identities=20% Similarity=0.146 Sum_probs=77.1
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhCc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKGY 250 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~gy 250 (283)
..+++||+.++|+.|+++|++++++||++ +..+...|+++|+..|++.++.+++ ..+||+|........++. ..-
T Consensus 106 ~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~---~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~-~~~ 181 (248)
T PLN02770 106 QLKPLNGLYKLKKWIEDRGLKRAAVTNAP---RENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLK-VSK 181 (248)
T ss_pred cCCcCccHHHHHHHHHHcCCeEEEEeCCC---HHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhC-CCh
Confidence 46889999999999999999999999998 6677888999999988877766654 567888854322222221 112
Q ss_pred eEeccCccchhhhccC-ccCCccccC
Q 023352 251 RIIGNIGDQWSDLLGT-NAGNRTFKL 275 (283)
Q Consensus 251 ~iv~~IGDq~sDl~ga-~ag~r~fkL 275 (283)
..+++|||+.+|++++ ++|.+++.+
T Consensus 182 ~~~l~vgDs~~Di~aA~~aGi~~i~v 207 (248)
T PLN02770 182 DHTFVFEDSVSGIKAGVAAGMPVVGL 207 (248)
T ss_pred hHEEEEcCCHHHHHHHHHCCCEEEEE
Confidence 4589999999999998 668877655
No 12
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.51 E-value=6e-15 Score=131.64 Aligned_cols=100 Identities=13% Similarity=0.171 Sum_probs=74.7
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhCc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKGY 250 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~gy 250 (283)
..+++||+.++++.|+++|++++++||++ +......|+..|+..++..+...+. ..+||+|........++. ..-
T Consensus 93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~---~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~-~~p 168 (229)
T PRK13226 93 QSQLFDGVEGMLQRLECAGCVWGIVTNKP---EYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIG-VAP 168 (229)
T ss_pred cCeeCCCHHHHHHHHHHCCCeEEEECCCC---HHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhC-CCh
Confidence 46889999999999999999999999998 4455678888999887777766554 467888854422222221 112
Q ss_pred eEeccCccchhhhccC-ccCCccccC
Q 023352 251 RIIGNIGDQWSDLLGT-NAGNRTFKL 275 (283)
Q Consensus 251 ~iv~~IGDq~sDl~ga-~ag~r~fkL 275 (283)
+.+++|||+.+|+.++ .+|.+++.+
T Consensus 169 ~~~l~IGDs~~Di~aA~~aG~~~i~v 194 (229)
T PRK13226 169 TDCVYVGDDERDILAARAAGMPSVAA 194 (229)
T ss_pred hhEEEeCCCHHHHHHHHHCCCcEEEE
Confidence 4589999999999998 567776533
No 13
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.50 E-value=1.8e-14 Score=131.57 Aligned_cols=100 Identities=16% Similarity=0.170 Sum_probs=77.8
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhCc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKGY 250 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~gy 250 (283)
..+++||+.++|+.|+++|++++++||++ +..+...|+..|+..+++.++.+++ ..+||+|... ...+++.|.
T Consensus 107 ~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~---~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~---~~a~~~l~~ 180 (260)
T PLN03243 107 LYRLRPGSREFVQALKKHEIPIAVASTRP---RRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMF---MYAAERLGF 180 (260)
T ss_pred CcccCCCHHHHHHHHHHCCCEEEEEeCcC---HHHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHH---HHHHHHhCC
Confidence 46789999999999999999999999998 5567788899999988887777655 4678888433 223333333
Q ss_pred --eEeccCccchhhhccC-ccCCccccCCC
Q 023352 251 --RIIGNIGDQWSDLLGT-NAGNRTFKLPD 277 (283)
Q Consensus 251 --~iv~~IGDq~sDl~ga-~ag~r~fkLPN 277 (283)
.-+++|||+.+|+.+| ++|++++.+.+
T Consensus 181 ~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g 210 (260)
T PLN03243 181 IPERCIVFGNSNSSVEAAHDGCMKCVAVAG 210 (260)
T ss_pred ChHHeEEEcCCHHHHHHHHHcCCEEEEEec
Confidence 3489999999999999 66888776643
No 14
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.50 E-value=7.4e-15 Score=129.01 Aligned_cols=100 Identities=20% Similarity=0.213 Sum_probs=74.4
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhCc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKGY 250 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~gy 250 (283)
..+++||+.++|+.|+++|++++++||++ +..+...|+..|+..+++.++..++ ..+||++........++. ...
T Consensus 80 ~~~~~~g~~~~l~~L~~~g~~~~i~S~~~---~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~-~~~ 155 (214)
T PRK13288 80 LVTEYETVYETLKTLKKQGYKLGIVTTKM---RDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLG-AKP 155 (214)
T ss_pred hcccCcCHHHHHHHHHHCCCeEEEEeCCC---HHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcC-CCH
Confidence 35789999999999999999999999998 5567778899999988877777554 467787743322222221 112
Q ss_pred eEeccCccchhhhccC-ccCCccccC
Q 023352 251 RIIGNIGDQWSDLLGT-NAGNRTFKL 275 (283)
Q Consensus 251 ~iv~~IGDq~sDl~ga-~ag~r~fkL 275 (283)
..+++|||+.+|+.++ .+|.+++.+
T Consensus 156 ~~~~~iGDs~~Di~aa~~aG~~~i~v 181 (214)
T PRK13288 156 EEALMVGDNHHDILAGKNAGTKTAGV 181 (214)
T ss_pred HHEEEECCCHHHHHHHHHCCCeEEEE
Confidence 3478999999999998 567765533
No 15
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.48 E-value=2.1e-14 Score=129.49 Aligned_cols=100 Identities=23% Similarity=0.237 Sum_probs=76.5
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhh-hhhhcccC-CCCceeEEeechhhhHhhhhC
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWE-KLILKGSS-HSGETAVVYKSSERKKLEMKG 249 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~-~lilr~~~-~~~KP~~~yK~~~r~~l~~~g 249 (283)
..+++||+.++|+.|+++|++++++||++ +..+...|++.|+..++ +.++..++ ..+||+|... ...+++.|
T Consensus 97 ~~~~~pg~~e~L~~L~~~g~~l~IvT~~~---~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~---~~a~~~l~ 170 (253)
T TIGR01422 97 YSSPIPGVIEVIAYLRARGIKIGSTTGYT---REMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMA---LKNAIELG 170 (253)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEECCCc---HHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHH---HHHHHHcC
Confidence 46899999999999999999999999998 55667788888888764 65555544 4678888443 23333333
Q ss_pred c---eEeccCccchhhhccC-ccCCccccCCC
Q 023352 250 Y---RIIGNIGDQWSDLLGT-NAGNRTFKLPD 277 (283)
Q Consensus 250 y---~iv~~IGDq~sDl~ga-~ag~r~fkLPN 277 (283)
. ..+++|||+++|+.++ ++|++++.++.
T Consensus 171 ~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~ 202 (253)
T TIGR01422 171 VYDVAACVKVGDTVPDIEEGRNAGMWTVGLIL 202 (253)
T ss_pred CCCchheEEECCcHHHHHHHHHCCCeEEEEec
Confidence 2 3489999999999999 67888887754
No 16
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.48 E-value=1.3e-13 Score=127.18 Aligned_cols=168 Identities=15% Similarity=0.144 Sum_probs=114.1
Q ss_pred chhhhhhhhhhccccccccchhhhHhHHHHHHhh---h----hhccCCCceeEEEecccccccCCccccccCCCcccCCc
Q 023352 89 VPEKCAGYVGHYMLGQQYRMDSEVVANEAILYAQ---S----LKLAGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNP 161 (283)
Q Consensus 89 ~p~~c~~~v~~y~~~~~Y~~D~~~v~~~a~~y~~---~----~~~~~~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~ 161 (283)
-+++|...+.+. ++.. ...+.+..+-..+.+ . +.....++++++||+|||+.++.. ..+|
T Consensus 112 ~~e~~~~R~~~R--~~~~-~~~~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~D~dgtl~~~~~--------~~~~-- 178 (300)
T PHA02530 112 PVEELVKRNRKR--GERA-VPEDVLRSMFKQMKEYRGLVWPVYTADPGLPKAVIFDIDGTLAKMGG--------RSPY-- 178 (300)
T ss_pred CHHHHHHHHHcc--CcCC-CCHHHHHHHHHHHHHhcCCCCceeccCCCCCCEEEEECCCcCcCCCC--------CCcc--
Confidence 456777777654 2222 234444444444432 1 122334568999999999998743 1223
Q ss_pred hhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhh--------hhhcccCCCCce
Q 023352 162 TLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEK--------LILKGSSHSGET 233 (283)
Q Consensus 162 ~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~--------lilr~~~~~~KP 233 (283)
+|......+++|++.++++.|+++|++++++|||++..+..+.++|...|+. ++. ++||+ ...+||
T Consensus 179 ----~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~-f~~i~~~~~~~~~~~~-~~~~kp 252 (300)
T PHA02530 179 ----DWTKVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIW-FDDLIGRPPDMHFQRE-QGDKRP 252 (300)
T ss_pred ----chhhcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCc-hhhhhCCcchhhhccc-CCCCCC
Confidence 3555667789999999999999999999999999998888888888777622 122 23333 235688
Q ss_pred eEEeechhhhHhhhhCceEeccCccchhhhccC-ccCCccccC
Q 023352 234 AVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGT-NAGNRTFKL 275 (283)
Q Consensus 234 ~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~ga-~ag~r~fkL 275 (283)
++..+.....++....++++++|||+.+|+.++ .+|+.++.+
T Consensus 253 ~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v 295 (300)
T PHA02530 253 DDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQV 295 (300)
T ss_pred cHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEe
Confidence 887665444444333568899999999999998 568777655
No 17
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.47 E-value=3.1e-14 Score=125.05 Aligned_cols=101 Identities=15% Similarity=0.123 Sum_probs=75.7
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhCc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKGY 250 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~gy 250 (283)
..+++||+.++|++|+++|++++++||.+ +......|++.|+..+++.++.+++ ...||++... +..+++.|.
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~---~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~---~~~~~~~~~ 165 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGL---PVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIF---YAALKRLGV 165 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCc---hHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHH---HHHHHHcCC
Confidence 35789999999999999999999999998 4455677888999888776665544 4678887433 222333333
Q ss_pred --eEeccCccch-hhhccC-ccCCccccCCCC
Q 023352 251 --RIIGNIGDQW-SDLLGT-NAGNRTFKLPDP 278 (283)
Q Consensus 251 --~iv~~IGDq~-sDl~ga-~ag~r~fkLPNp 278 (283)
..+++|||++ +|+.++ ++|.+++.++.+
T Consensus 166 ~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~ 197 (221)
T TIGR02253 166 KPEEAVMVGDRLDKDIKGAKNLGMKTVWINQG 197 (221)
T ss_pred ChhhEEEECCChHHHHHHHHHCCCEEEEECCC
Confidence 4589999998 899999 578887766543
No 18
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.46 E-value=2e-14 Score=126.47 Aligned_cols=99 Identities=24% Similarity=0.320 Sum_probs=75.3
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccch--hhhhhhhcccC-CCCceeEEeechhhhHhhhh
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFD--TWEKLILKGSS-HSGETAVVYKSSERKKLEMK 248 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~--~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~ 248 (283)
..+++||+.++|+.|+++|++++++||++ +......|+++|+. .++..++..++ ..+||+|... ...+++.
T Consensus 85 ~~~l~~G~~~~L~~L~~~g~~~~ivT~~~---~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~---~~a~~~~ 158 (220)
T TIGR03351 85 PPVALPGAEEAFRSLRSSGIKVALTTGFD---RDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLI---LRAMELT 158 (220)
T ss_pred CCccCCCHHHHHHHHHHCCCEEEEEeCCc---hHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHH---HHHHHHc
Confidence 35799999999999999999999999998 45667788888987 66666666554 4678888443 2233333
Q ss_pred Cc---eEeccCccchhhhccC-ccCCcc-ccCC
Q 023352 249 GY---RIIGNIGDQWSDLLGT-NAGNRT-FKLP 276 (283)
Q Consensus 249 gy---~iv~~IGDq~sDl~ga-~ag~r~-fkLP 276 (283)
|. ..+++|||+++|+.++ ++|+++ +.+.
T Consensus 159 ~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~ 191 (220)
T TIGR03351 159 GVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVL 191 (220)
T ss_pred CCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEe
Confidence 32 4589999999999999 678887 6553
No 19
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.46 E-value=1.9e-14 Score=125.55 Aligned_cols=100 Identities=16% Similarity=0.216 Sum_probs=74.3
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhCc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKGY 250 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~gy 250 (283)
..+++||+.++|+.|+++|++++++||++ +......|++.|+..++..+...++ ...||+|........++. ...
T Consensus 83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~-~~~ 158 (213)
T TIGR01449 83 LTSVFPGVEATLGALRAKGLRLGLVTNKP---TPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLG-VAP 158 (213)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCC---HHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcC-CCh
Confidence 35789999999999999999999999987 5567888999999887776666544 467887743322222221 112
Q ss_pred eEeccCccchhhhccC-ccCCccccC
Q 023352 251 RIIGNIGDQWSDLLGT-NAGNRTFKL 275 (283)
Q Consensus 251 ~iv~~IGDq~sDl~ga-~ag~r~fkL 275 (283)
..+++|||+.+|+.++ ++|..++.+
T Consensus 159 ~~~~~igDs~~d~~aa~~aG~~~i~v 184 (213)
T TIGR01449 159 QQMVYVGDSRVDIQAARAAGCPSVLL 184 (213)
T ss_pred hHeEEeCCCHHHHHHHHHCCCeEEEE
Confidence 4588999999999988 567776544
No 20
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.45 E-value=3.6e-14 Score=135.83 Aligned_cols=102 Identities=13% Similarity=0.096 Sum_probs=79.1
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhCc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKGY 250 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~gy 250 (283)
...++||+.++|+.|+++|++++++||++ +..+...|+++|+..|++.++..++ ..+||++.........+. ..-
T Consensus 214 ~~~l~pGa~ElL~~Lk~~GiklaIaSn~~---~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lg-l~P 289 (381)
T PLN02575 214 IYRLRTGSQEFVNVLMNYKIPMALVSTRP---RKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLN-FIP 289 (381)
T ss_pred CCCcCcCHHHHHHHHHHCCCeEEEEeCCC---HHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcC-CCc
Confidence 46789999999999999999999999998 6778889999999998888777665 467888844322222221 112
Q ss_pred eEeccCccchhhhccC-ccCCccccCCC
Q 023352 251 RIIGNIGDQWSDLLGT-NAGNRTFKLPD 277 (283)
Q Consensus 251 ~iv~~IGDq~sDl~ga-~ag~r~fkLPN 277 (283)
..+++|||+.+|++++ ++|++++.+.+
T Consensus 290 eecl~IGDS~~DIeAAk~AGm~~IgV~~ 317 (381)
T PLN02575 290 ERCIVFGNSNQTVEAAHDARMKCVAVAS 317 (381)
T ss_pred ccEEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 3589999999999999 56888776653
No 21
>PRK11587 putative phosphatase; Provisional
Probab=99.45 E-value=3.6e-14 Score=125.34 Aligned_cols=100 Identities=19% Similarity=0.208 Sum_probs=71.5
Q ss_pred CCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhccc-CCCCceeEEeechhhhHhhhhC
Q 023352 171 GKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGS-SHSGETAVVYKSSERKKLEMKG 249 (283)
Q Consensus 171 ~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~KP~~~yK~~~r~~l~~~g 249 (283)
...+++||+.++|+.|+++|++++++||++ +..+...|+..|+.. +..++..+ ....||+|.... ..++..|
T Consensus 80 ~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~---~~~~~~~l~~~~l~~-~~~i~~~~~~~~~KP~p~~~~---~~~~~~g 152 (218)
T PRK11587 80 EGITALPGAIALLNHLNKLGIPWAIVTSGS---VPVASARHKAAGLPA-PEVFVTAERVKRGKPEPDAYL---LGAQLLG 152 (218)
T ss_pred cCceeCcCHHHHHHHHHHcCCcEEEEcCCC---chHHHHHHHhcCCCC-ccEEEEHHHhcCCCCCcHHHH---HHHHHcC
Confidence 356889999999999999999999999987 334566677788854 34444443 346788884432 2222223
Q ss_pred --ceEeccCccchhhhccC-ccCCccccCCC
Q 023352 250 --YRIIGNIGDQWSDLLGT-NAGNRTFKLPD 277 (283)
Q Consensus 250 --y~iv~~IGDq~sDl~ga-~ag~r~fkLPN 277 (283)
...+++|||+.+|+.+| ++|.+++.+.+
T Consensus 153 ~~p~~~l~igDs~~di~aA~~aG~~~i~v~~ 183 (218)
T PRK11587 153 LAPQECVVVEDAPAGVLSGLAAGCHVIAVNA 183 (218)
T ss_pred CCcccEEEEecchhhhHHHHHCCCEEEEECC
Confidence 35589999999999998 66877666543
No 22
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.44 E-value=3e-14 Score=123.61 Aligned_cols=102 Identities=19% Similarity=0.165 Sum_probs=76.2
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhCc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKGY 250 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~gy 250 (283)
..+++||+.++|+.|+++|++++++||.+ .......|++.|+..+++.++..++ ...||++........++. ...
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~---~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~-~~p 165 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSNGS---PAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALG-VPP 165 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeCCC---HHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhC-CCh
Confidence 46789999999999999999999999988 4556677888899877776666544 567888854322222221 112
Q ss_pred eEeccCccchhhhccC-ccCCccccCCC
Q 023352 251 RIIGNIGDQWSDLLGT-NAGNRTFKLPD 277 (283)
Q Consensus 251 ~iv~~IGDq~sDl~ga-~ag~r~fkLPN 277 (283)
..+++|||+.+|+.++ .+|++++.+..
T Consensus 166 ~~~~~vgD~~~Di~~A~~~G~~~i~v~r 193 (198)
T TIGR01428 166 DEVLFVASNPWDLGGAKKFGFKTAWVNR 193 (198)
T ss_pred hhEEEEeCCHHHHHHHHHCCCcEEEecC
Confidence 4578999999999999 67888776643
No 23
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.44 E-value=4.6e-14 Score=124.79 Aligned_cols=101 Identities=16% Similarity=0.179 Sum_probs=79.3
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhCc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKGY 250 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~gy 250 (283)
..+++||+.++++.|+++|++++++||.. +..+...|+..|+..+++.++..+. ..+||++... +..+...|.
T Consensus 90 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~---~~~~~~~~~ 163 (222)
T PRK10826 90 TRPLLPGVREALALCKAQGLKIGLASASP---LHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVY---LNCAAKLGV 163 (222)
T ss_pred CCCCCCCHHHHHHHHHHCCCeEEEEeCCc---HHHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHH---HHHHHHcCC
Confidence 46899999999999999999999999987 5667788889999888777766544 4678877432 333333333
Q ss_pred --eEeccCccchhhhccC-ccCCccccCCCC
Q 023352 251 --RIIGNIGDQWSDLLGT-NAGNRTFKLPDP 278 (283)
Q Consensus 251 --~iv~~IGDq~sDl~ga-~ag~r~fkLPNp 278 (283)
..+++|||+.+|+.++ .+|++++-+++|
T Consensus 164 ~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~ 194 (222)
T PRK10826 164 DPLTCVALEDSFNGMIAAKAARMRSIVVPAP 194 (222)
T ss_pred CHHHeEEEcCChhhHHHHHHcCCEEEEecCC
Confidence 4589999999999998 778888888765
No 24
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.44 E-value=2.4e-14 Score=131.71 Aligned_cols=96 Identities=16% Similarity=0.204 Sum_probs=71.4
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhC--
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKG-- 249 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~g-- 249 (283)
..+++||+.++|+.|+++|++++++||.+ +..+...|+..|+..+++.+...+....||. .....+++.+
T Consensus 140 ~~~l~pg~~e~L~~L~~~gi~laIvSn~~---~~~~~~~L~~~gl~~~F~~vi~~~~~~~k~~-----~~~~~l~~~~~~ 211 (273)
T PRK13225 140 ALQLFPGVADLLAQLRSRSLCLGILSSNS---RQNIEAFLQRQGLRSLFSVVQAGTPILSKRR-----ALSQLVAREGWQ 211 (273)
T ss_pred cCCcCCCHHHHHHHHHHCCCeEEEEeCCC---HHHHHHHHHHcCChhheEEEEecCCCCCCHH-----HHHHHHHHhCcC
Confidence 45789999999999999999999999998 6677888999999888776655443333432 2222222222
Q ss_pred ceEeccCccchhhhccC-ccCCccccC
Q 023352 250 YRIIGNIGDQWSDLLGT-NAGNRTFKL 275 (283)
Q Consensus 250 y~iv~~IGDq~sDl~ga-~ag~r~fkL 275 (283)
...+++|||+.+|+.++ ++|++++.+
T Consensus 212 p~~~l~IGDs~~Di~aA~~AG~~~I~v 238 (273)
T PRK13225 212 PAAVMYVGDETRDVEAARQVGLIAVAV 238 (273)
T ss_pred hhHEEEECCCHHHHHHHHHCCCeEEEE
Confidence 23589999999999998 668887654
No 25
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.43 E-value=4.2e-14 Score=123.44 Aligned_cols=98 Identities=19% Similarity=0.215 Sum_probs=73.2
Q ss_pred CCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhC
Q 023352 171 GKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKG 249 (283)
Q Consensus 171 ~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~g 249 (283)
...+++||+.++|++|+++|++++++||++ +..+...|+..|+..+++.++..++ ..+||++... +..+++.|
T Consensus 72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~---~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~---~~~~~~~~ 145 (205)
T TIGR01454 72 GEVEVFPGVPELLAELRADGVGTAIATGKS---GPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIV---REALRLLD 145 (205)
T ss_pred cccccCCCHHHHHHHHHHCCCeEEEEeCCc---hHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHH---HHHHHHcC
Confidence 356889999999999999999999999987 4556778899999887766655443 4578877433 22233333
Q ss_pred c--eEeccCccchhhhccC-ccCCcccc
Q 023352 250 Y--RIIGNIGDQWSDLLGT-NAGNRTFK 274 (283)
Q Consensus 250 y--~iv~~IGDq~sDl~ga-~ag~r~fk 274 (283)
. ..+++|||+.+|+.++ .+|++++.
T Consensus 146 ~~~~~~l~igD~~~Di~aA~~~Gi~~i~ 173 (205)
T TIGR01454 146 VPPEDAVMVGDAVTDLASARAAGTATVA 173 (205)
T ss_pred CChhheEEEcCCHHHHHHHHHcCCeEEE
Confidence 2 3589999999999988 56776543
No 26
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.43 E-value=6.2e-14 Score=119.58 Aligned_cols=95 Identities=19% Similarity=0.143 Sum_probs=70.8
Q ss_pred CCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhCc-
Q 023352 173 APPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKGY- 250 (283)
Q Consensus 173 ~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~gy- 250 (283)
.+++||+.++|+.|+++|++++++||+.. ....|+..|+..+++.++.+.+ ...||++.... ..+++.|.
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~-----~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~---~~~~~~~~~ 157 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASKN-----APTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFL---AAAEGLGVS 157 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcc-----HHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHH---HHHHHcCCC
Confidence 47899999999999999999999999652 2356888899887777665544 46788884432 22222232
Q ss_pred -eEeccCccchhhhccC-ccCCccccC
Q 023352 251 -RIIGNIGDQWSDLLGT-NAGNRTFKL 275 (283)
Q Consensus 251 -~iv~~IGDq~sDl~ga-~ag~r~fkL 275 (283)
..+++|||+.+|+.++ .+|++++.+
T Consensus 158 ~~~~v~vgD~~~di~aA~~aG~~~i~v 184 (185)
T TIGR01990 158 PSECIGIEDAQAGIEAIKAAGMFAVGV 184 (185)
T ss_pred HHHeEEEecCHHHHHHHHHcCCEEEec
Confidence 3478999999999999 568887654
No 27
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.39 E-value=2.6e-13 Score=133.10 Aligned_cols=99 Identities=12% Similarity=0.115 Sum_probs=75.4
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCce
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYR 251 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~ 251 (283)
..+++||+.++|++|+++|++++++||++ +..+...|+.+|+..|++.++..++..+||.|... ...+++.+.+
T Consensus 328 ~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~---~~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~---~~al~~l~~~ 401 (459)
T PRK06698 328 KGALYPNVKEIFTYIKENNCSIYIASNGL---TEYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLV---KSILNKYDIK 401 (459)
T ss_pred CCCcCCCHHHHHHHHHHCCCeEEEEeCCc---hHHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHH---HHHHHhcCcc
Confidence 46889999999999999999999999998 66778889999999888877776553333333222 2223333456
Q ss_pred EeccCccchhhhccC-ccCCccccCC
Q 023352 252 IIGNIGDQWSDLLGT-NAGNRTFKLP 276 (283)
Q Consensus 252 iv~~IGDq~sDl~ga-~ag~r~fkLP 276 (283)
.+++|||+.+|+.++ ++|++++.++
T Consensus 402 ~~v~VGDs~~Di~aAk~AG~~~I~v~ 427 (459)
T PRK06698 402 EAAVVGDRLSDINAAKDNGLIAIGCN 427 (459)
T ss_pred eEEEEeCCHHHHHHHHHCCCeEEEEe
Confidence 799999999999998 6788776653
No 28
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.39 E-value=2.1e-13 Score=124.19 Aligned_cols=99 Identities=21% Similarity=0.204 Sum_probs=72.6
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhh-hhhhhcccC-CCCceeEEeechhhhHhhhhC
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTW-EKLILKGSS-HSGETAVVYKSSERKKLEMKG 249 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~-~~lilr~~~-~~~KP~~~yK~~~r~~l~~~g 249 (283)
...++||+.++|+.|+++|++++++||.+ +..+...|+..|+..+ ++.++..++ ...||+|... ...+.+.|
T Consensus 99 ~~~~~pg~~elL~~L~~~g~~l~I~T~~~---~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~---~~a~~~l~ 172 (267)
T PRK13478 99 YATPIPGVLEVIAALRARGIKIGSTTGYT---REMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMA---LKNAIELG 172 (267)
T ss_pred cCCCCCCHHHHHHHHHHCCCEEEEEcCCc---HHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHH---HHHHHHcC
Confidence 46889999999999999999999999998 4556677777776554 355555443 4678888443 23333333
Q ss_pred c---eEeccCccchhhhccC-ccCCccccCC
Q 023352 250 Y---RIIGNIGDQWSDLLGT-NAGNRTFKLP 276 (283)
Q Consensus 250 y---~iv~~IGDq~sDl~ga-~ag~r~fkLP 276 (283)
. ..+++|||+.+|+.++ ++|.+++.+.
T Consensus 173 ~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~ 203 (267)
T PRK13478 173 VYDVAACVKVDDTVPGIEEGLNAGMWTVGVI 203 (267)
T ss_pred CCCCcceEEEcCcHHHHHHHHHCCCEEEEEc
Confidence 2 4589999999999999 6788776553
No 29
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.37 E-value=5.1e-13 Score=122.57 Aligned_cols=98 Identities=20% Similarity=0.267 Sum_probs=72.5
Q ss_pred CCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhCc-
Q 023352 173 APPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKGY- 250 (283)
Q Consensus 173 ~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~gy- 250 (283)
.+++||+.++++.|+++|++++++||.++ ......|.+.|+..+++.+...+. ...||++... ...+++.|.
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~---~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~---~~~~~~~g~~ 173 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPE---RFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAAL---LFVMKMAGVP 173 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcH---HHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHH---HHHHHHhCCC
Confidence 56899999999999999999999999883 455677888899887776666544 4567877432 222222232
Q ss_pred -eEeccCccchhhhccC-ccCCccccCC
Q 023352 251 -RIIGNIGDQWSDLLGT-NAGNRTFKLP 276 (283)
Q Consensus 251 -~iv~~IGDq~sDl~ga-~ag~r~fkLP 276 (283)
..+++|||+.+|+.++ .+|++++-++
T Consensus 174 ~~~~l~IGD~~~Di~aA~~aGi~~i~v~ 201 (272)
T PRK13223 174 PSQSLFVGDSRSDVLAAKAAGVQCVALS 201 (272)
T ss_pred hhHEEEECCCHHHHHHHHHCCCeEEEEe
Confidence 3588999999999998 5677766554
No 30
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.37 E-value=5.6e-13 Score=113.65 Aligned_cols=95 Identities=17% Similarity=0.145 Sum_probs=70.7
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhCc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKGY 250 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~gy 250 (283)
...++||+.++|+.|+++|++++++||+. .....|+..|+..+++.++.... ...||++... ...+++.|.
T Consensus 86 ~~~~~~g~~~~l~~l~~~g~~i~i~S~~~-----~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~---~~~~~~~~~ 157 (185)
T TIGR02009 86 GAEVLPGIENFLKRLKKKGIAVGLGSSSK-----NADRILAKLGLTDYFDAIVDADEVKEGKPHPETF---LLAAELLGV 157 (185)
T ss_pred CCCCCcCHHHHHHHHHHcCCeEEEEeCch-----hHHHHHHHcChHHHCCEeeehhhCCCCCCChHHH---HHHHHHcCC
Confidence 46899999999999999999999999982 35677888999888777766543 4577777432 222333332
Q ss_pred --eEeccCccchhhhccC-ccCCcccc
Q 023352 251 --RIIGNIGDQWSDLLGT-NAGNRTFK 274 (283)
Q Consensus 251 --~iv~~IGDq~sDl~ga-~ag~r~fk 274 (283)
.-+++|||+..|+.++ .+|.+++.
T Consensus 158 ~~~~~v~IgD~~~di~aA~~~G~~~i~ 184 (185)
T TIGR02009 158 SPNECVVFEDALAGVQAARAAGMFAVA 184 (185)
T ss_pred CHHHeEEEeCcHhhHHHHHHCCCeEee
Confidence 3478899999999999 56776653
No 31
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.36 E-value=1.9e-13 Score=118.79 Aligned_cols=90 Identities=17% Similarity=0.129 Sum_probs=66.6
Q ss_pred CCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCceEe
Q 023352 174 PPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRII 253 (283)
Q Consensus 174 ~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~iv 253 (283)
.+.+++.++|+.|+++|++++++||++ +..+...|+..|+..+++.++..++...||++.......+.+.- .-..+
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~---~~~~~~~l~~~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~-~~~~~ 181 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTGRP---RKDAAKFLTTHGLEILFPVQIWMEDCPPKPNPEPLILAAKALGV-EACHA 181 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECCCC---HHHHHHHHHHcCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCc-CcccE
Confidence 445566999999999999999999998 66778889999998888777776654348888443222222211 12358
Q ss_pred ccCccchhhhccCc
Q 023352 254 GNIGDQWSDLLGTN 267 (283)
Q Consensus 254 ~~IGDq~sDl~ga~ 267 (283)
++|||+.+|+.++.
T Consensus 182 i~vGD~~~Di~aA~ 195 (197)
T TIGR01548 182 AMVGDTVDDIITGR 195 (197)
T ss_pred EEEeCCHHHHHHHH
Confidence 99999999999875
No 32
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.35 E-value=3.2e-13 Score=115.79 Aligned_cols=99 Identities=15% Similarity=0.108 Sum_probs=72.4
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhCc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKGY 250 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~gy 250 (283)
..+++|+ .++|..|+++ ++++++||.+ +......|++.|+..|++.++..++ ...||+|........++.- ..
T Consensus 86 ~~~~~~~-~e~L~~L~~~-~~l~I~T~~~---~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~-~~ 159 (188)
T PRK10725 86 SVEPLPL-IEVVKAWHGR-RPMAVGTGSE---SAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGV-QP 159 (188)
T ss_pred cCCCccH-HHHHHHHHhC-CCEEEEcCCc---hHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCC-CH
Confidence 3467785 6999999865 8999999987 5566788999999988887777654 4678888544333223221 12
Q ss_pred eEeccCccchhhhccC-ccCCccccCC
Q 023352 251 RIIGNIGDQWSDLLGT-NAGNRTFKLP 276 (283)
Q Consensus 251 ~iv~~IGDq~sDl~ga-~ag~r~fkLP 276 (283)
..+++|||+.+|+.++ .+|.+++.+.
T Consensus 160 ~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 160 TQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred HHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 3478899999999999 6688877654
No 33
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.35 E-value=2.5e-13 Score=113.37 Aligned_cols=129 Identities=17% Similarity=0.094 Sum_probs=85.8
Q ss_pred eeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccc-------
Q 023352 132 NIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQR------- 204 (283)
Q Consensus 132 ~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r------- 204 (283)
++++||+||||.++...+ |. ..|.+ ..++||+.++++.|+++|++++++||.+...+
T Consensus 1 ~~~~~d~dgtl~~~~~~~---------~~-~~~~~------~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~ 64 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSD---------YP-RSLDD------WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEA 64 (147)
T ss_pred CeEEEeCCCceeccCCcc---------cC-CCHHH------eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHH
Confidence 478999999999985411 11 12433 35899999999999999999999999874211
Q ss_pred -----cccHhhhhhccchh---hhhhhhccc-CCCCceeEEeechhhhHhhhhCceEeccCccchhhhccC-ccCCcccc
Q 023352 205 -----NVTEANLKHAGFDT---WEKLILKGS-SHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGT-NAGNRTFK 274 (283)
Q Consensus 205 -----~~T~~~L~~~G~~~---~~~lilr~~-~~~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~ga-~ag~r~fk 274 (283)
..+...|++.|+.. ++......+ ...+||++.......+.+. .....+++|||+..|+.+| ++|++++.
T Consensus 65 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~-~~~~e~i~IGDs~~Di~~A~~~Gi~~v~ 143 (147)
T TIGR01656 65 FRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPGLILEALKRLG-VDASRSLVVGDRLRDLQAARNAGLAAVL 143 (147)
T ss_pred HHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcC-CChHHEEEEcCCHHHHHHHHHCCCCEEE
Confidence 23456677788763 111111112 2246787754433333322 1234589999999999999 67899888
Q ss_pred CCC
Q 023352 275 LPD 277 (283)
Q Consensus 275 LPN 277 (283)
+|.
T Consensus 144 i~~ 146 (147)
T TIGR01656 144 LVD 146 (147)
T ss_pred ecC
Confidence 774
No 34
>PLN02940 riboflavin kinase
Probab=99.35 E-value=2.9e-13 Score=130.01 Aligned_cols=102 Identities=22% Similarity=0.311 Sum_probs=77.0
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhh-hccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhC
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLK-HAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKG 249 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~-~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~g 249 (283)
...++||+.++|+.|+++|++++++||++ +..+...|. ..|+..+++.++.+++ ..+||++.......+.+. ..
T Consensus 91 ~~~l~pGv~elL~~Lk~~g~~l~IvTn~~---~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lg-v~ 166 (382)
T PLN02940 91 NIKALPGANRLIKHLKSHGVPMALASNSP---RANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLN-VE 166 (382)
T ss_pred cCCCCcCHHHHHHHHHHCCCcEEEEeCCc---HHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcC-CC
Confidence 46789999999999999999999999998 445566776 6799888888877665 467888854422222221 11
Q ss_pred ceEeccCccchhhhccC-ccCCccccCCC
Q 023352 250 YRIIGNIGDQWSDLLGT-NAGNRTFKLPD 277 (283)
Q Consensus 250 y~iv~~IGDq~sDl~ga-~ag~r~fkLPN 277 (283)
...+++|||+.+|+.+| ++|++++.++.
T Consensus 167 p~~~l~VGDs~~Di~aA~~aGi~~I~v~~ 195 (382)
T PLN02940 167 PSNCLVIEDSLPGVMAGKAAGMEVIAVPS 195 (382)
T ss_pred hhHEEEEeCCHHHHHHHHHcCCEEEEECC
Confidence 24588999999999998 67888777754
No 35
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.34 E-value=6.8e-13 Score=116.63 Aligned_cols=100 Identities=16% Similarity=0.190 Sum_probs=71.8
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhCc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKGY 250 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~gy 250 (283)
...++||+.++++.|+++|++++++||..+ ......|+..|+..++..++..+. ...||++.........+. ...
T Consensus 91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~---~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~-~~~ 166 (226)
T PRK13222 91 GSRLYPGVKETLAALKAAGYPLAVVTNKPT---PFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLG-LDP 166 (226)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcC-CCh
Confidence 467999999999999999999999999983 445678888899877776666544 356776632222222222 123
Q ss_pred eEeccCccchhhhccC-ccCCccccC
Q 023352 251 RIIGNIGDQWSDLLGT-NAGNRTFKL 275 (283)
Q Consensus 251 ~iv~~IGDq~sDl~ga-~ag~r~fkL 275 (283)
..+++|||+.+|+.++ .+|..++.+
T Consensus 167 ~~~i~igD~~~Di~~a~~~g~~~i~v 192 (226)
T PRK13222 167 EEMLFVGDSRNDIQAARAAGCPSVGV 192 (226)
T ss_pred hheEEECCCHHHHHHHHHCCCcEEEE
Confidence 4588999999999998 556665554
No 36
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.32 E-value=6.7e-13 Score=113.93 Aligned_cols=96 Identities=15% Similarity=0.084 Sum_probs=70.5
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CC----CceeEEeechhhhHhh
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HS----GETAVVYKSSERKKLE 246 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~----~KP~~~yK~~~r~~l~ 246 (283)
..+++||+.++|+.|+ .+++++||.+ +......|+..|+..+++.++..++ .. .||++.......+++.
T Consensus 82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~---~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~ 155 (184)
T TIGR01993 82 KLKPDPELRNLLLRLP---GRKIIFTNGD---RAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAG 155 (184)
T ss_pred hCCCCHHHHHHHHhCC---CCEEEEeCCC---HHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhC
Confidence 3568999999999997 4799999998 5567788899999888877776554 33 4888854433333332
Q ss_pred hhCceEeccCccchhhhccC-ccCCcccc
Q 023352 247 MKGYRIIGNIGDQWSDLLGT-NAGNRTFK 274 (283)
Q Consensus 247 ~~gy~iv~~IGDq~sDl~ga-~ag~r~fk 274 (283)
.....+++|||+..|+.++ .+|++++.
T Consensus 156 -~~~~~~l~vgD~~~di~aA~~~G~~~i~ 183 (184)
T TIGR01993 156 -VDPERAIFFDDSARNIAAAKALGMKTVL 183 (184)
T ss_pred -CCccceEEEeCCHHHHHHHHHcCCEEee
Confidence 1234578999999999998 66777653
No 37
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.31 E-value=9.6e-13 Score=114.42 Aligned_cols=94 Identities=20% Similarity=0.262 Sum_probs=69.6
Q ss_pred CCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhCc-
Q 023352 173 APPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKGY- 250 (283)
Q Consensus 173 ~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~gy- 250 (283)
..++||+.++|++|+++|++++++||.+. . ....|+..|+..+++.++.... ..+||++... +..+++.|.
T Consensus 104 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~---~-~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~---~~~~~~~~~~ 176 (203)
T TIGR02252 104 WQVYPDAIKLLKDLRERGLILGVISNFDS---R-LRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIF---QEALERAGIS 176 (203)
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEeCCch---h-HHHHHHHCCcHHhcceEEeecccCCCCCCHHHH---HHHHHHcCCC
Confidence 36899999999999999999999999763 2 3567888899887776665443 5678888433 222333333
Q ss_pred -eEeccCccch-hhhccC-ccCCccc
Q 023352 251 -RIIGNIGDQW-SDLLGT-NAGNRTF 273 (283)
Q Consensus 251 -~iv~~IGDq~-sDl~ga-~ag~r~f 273 (283)
..+++|||+. +|+.++ .+|++++
T Consensus 177 ~~~~~~IgD~~~~Di~~A~~aG~~~i 202 (203)
T TIGR02252 177 PEEALHIGDSLRNDYQGARAAGWRAL 202 (203)
T ss_pred hhHEEEECCCchHHHHHHHHcCCeee
Confidence 4589999998 899998 5676654
No 38
>PRK09449 dUMP phosphatase; Provisional
Probab=99.31 E-value=9.4e-13 Score=116.17 Aligned_cols=97 Identities=26% Similarity=0.359 Sum_probs=73.7
Q ss_pred CCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhCc-
Q 023352 173 APPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKGY- 250 (283)
Q Consensus 173 ~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~gy- 250 (283)
.+++||+.++|+.|+ +|++++++||.+ +..+...|++.|+..+++.++..++ ...||++.... ..+++.|.
T Consensus 94 ~~~~~g~~~~L~~L~-~~~~~~i~Tn~~---~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~---~~~~~~~~~ 166 (224)
T PRK09449 94 CTPLPGAVELLNALR-GKVKMGIITNGF---TELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFD---YALEQMGNP 166 (224)
T ss_pred CccCccHHHHHHHHH-hCCeEEEEeCCc---HHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHH---HHHHHcCCC
Confidence 578999999999999 689999999987 5566778899999888777666544 46788884432 23333332
Q ss_pred --eEeccCccch-hhhccC-ccCCccccCC
Q 023352 251 --RIIGNIGDQW-SDLLGT-NAGNRTFKLP 276 (283)
Q Consensus 251 --~iv~~IGDq~-sDl~ga-~ag~r~fkLP 276 (283)
+.+++|||+. +|+.+| ++|++++.+.
T Consensus 167 ~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~ 196 (224)
T PRK09449 167 DRSRVLMVGDNLHSDILGGINAGIDTCWLN 196 (224)
T ss_pred CcccEEEEcCCcHHHHHHHHHCCCcEEEEC
Confidence 4589999998 799999 6788766553
No 39
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.31 E-value=8.4e-13 Score=122.09 Aligned_cols=98 Identities=17% Similarity=0.121 Sum_probs=67.2
Q ss_pred CCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhcc---chhhhhhhhcccC-CCCceeEEeechhhhHhhhh
Q 023352 173 APPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAG---FDTWEKLILKGSS-HSGETAVVYKSSERKKLEMK 248 (283)
Q Consensus 173 ~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G---~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~ 248 (283)
.+++||+.++|++|+++|++++++||.+. ......|+..+ +..++..+ .+++ ...||+|.+.... +...
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~---~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a---~~~~ 215 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNE---KAVSKIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLA---AETL 215 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHHHhccccccCceEEE-eccccCCCCCCHHHHHHH---HHHh
Confidence 47999999999999999999999999873 34444555442 22223344 3333 4678888543222 2222
Q ss_pred Cc--eEeccCccchhhhccC-ccCCccccCCC
Q 023352 249 GY--RIIGNIGDQWSDLLGT-NAGNRTFKLPD 277 (283)
Q Consensus 249 gy--~iv~~IGDq~sDl~ga-~ag~r~fkLPN 277 (283)
|. ..+++|||+++|+.++ .+|++++.+++
T Consensus 216 ~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~ 247 (286)
T PLN02779 216 GVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKS 247 (286)
T ss_pred CcChHHEEEEeCCHHhHHHHHHcCCEEEEEcc
Confidence 33 3488999999999999 67888777655
No 40
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.30 E-value=1.1e-12 Score=104.02 Aligned_cols=120 Identities=21% Similarity=0.199 Sum_probs=83.0
Q ss_pred eEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhh
Q 023352 133 IWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLK 212 (283)
Q Consensus 133 avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~ 212 (283)
+++||+||||..+.++... .....+.|++.+++++|+++|++++++||+. +.....+++
T Consensus 1 ~~vfD~D~tl~~~~~~~~~------------------~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~---~~~~~~~~~ 59 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAE------------------IEELELYPGVKEALKELKEKGIKLALATNKS---RREVLELLE 59 (139)
T ss_pred CeEEccCCceEccCccccc------------------cccCCcCcCHHHHHHHHHHCCCeEEEEeCch---HHHHHHHHH
Confidence 4799999999987553321 2346899999999999999999999999999 667788888
Q ss_pred hccchhhhhhhhcccC-CCC----------------ceeEEeechhhhHhhhhCceEeccCccchhhhccCcc-CCcccc
Q 023352 213 HAGFDTWEKLILKGSS-HSG----------------ETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGTNA-GNRTFK 274 (283)
Q Consensus 213 ~~G~~~~~~lilr~~~-~~~----------------KP~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~ga~a-g~r~fk 274 (283)
..|+..++..++.... ... ||.+..+......+. ..+..+++|||+.+|+..+.. |.+++.
T Consensus 60 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 60 ELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLG-VDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred HcCCchhhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcC-CChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 8888654444443322 111 443322222222222 224568999999999998854 766553
No 41
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.28 E-value=1.1e-12 Score=106.92 Aligned_cols=123 Identities=20% Similarity=0.150 Sum_probs=82.1
Q ss_pred eeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCccc-----ccc
Q 023352 132 NIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQ-----RNV 206 (283)
Q Consensus 132 ~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~-----r~~ 206 (283)
++++||+||||.++.++.. .|. ...++|++.+++++|+++|++++++||++... ++.
T Consensus 1 k~~~~D~dgtL~~~~~~~~------------~~~------~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~ 62 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVD------------DED------ERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGR 62 (132)
T ss_pred CEEEEeCCCceecCCCCCC------------CHH------HheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHH
Confidence 4799999999997532211 121 24689999999999999999999999998333 234
Q ss_pred cHhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCceEeccCcc-chhhhccC-ccCCccccC
Q 023352 207 TEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGD-QWSDLLGT-NAGNRTFKL 275 (283)
Q Consensus 207 T~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~iv~~IGD-q~sDl~ga-~ag~r~fkL 275 (283)
....|+..|+...+ .+... ...||.+........++.....+.+++||| ...|+.++ .+|.+++-+
T Consensus 63 ~~~~l~~~~l~~~~-~~~~~--~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~ 130 (132)
T TIGR01662 63 VARRLEELGVPIDV-LYACP--HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILV 130 (132)
T ss_pred HHHHHHHCCCCEEE-EEECC--CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEe
Confidence 56678888886422 22333 356777754433333331012356899999 68999999 567665543
No 42
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.27 E-value=6.9e-13 Score=110.30 Aligned_cols=129 Identities=19% Similarity=0.267 Sum_probs=80.2
Q ss_pred eEEEecccccccCCccccc------cCCCcc----------cCC-----chhhhhhhh-cCCCCCChhhHHHHHHHHHcC
Q 023352 133 IWVFDIDETSLSNLPYYAK------NGFGVK----------PYN-----PTLFNEWVN-TGKAPPLPESLKLYKKLLLLG 190 (283)
Q Consensus 133 avVFDIDgTLldn~~y~~~------~~~g~~----------~~~-----~~~~~~~~~-~~~~~~ipga~eLl~~L~~~G 190 (283)
+++||+||||+|+.+-+.. ..+|.. +.. ...|++... ......+||+.++++.|+++|
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l~~L~~~g 80 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEETLEEFGEDFQALKALRGLAEELLYRIATSFEELLGYDAEEAYIRGAADLLKRLKEAG 80 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHHHHHhcccHHHHHHHHccChHHHHHHHHHHHHHhCcchhheeccCHHHHHHHHHHCc
Confidence 4899999999998653311 011110 000 012222221 134567899999999999999
Q ss_pred eEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCceEeccCccchhhhccCc
Q 023352 191 IKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGTN 267 (283)
Q Consensus 191 ikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~ga~ 267 (283)
++++++||++ +......++.. +..++..+...++..+||++........++.-. . .+++|||+..|+.++.
T Consensus 81 ~~~~i~T~~~---~~~~~~~~~~~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~-~-~~l~iGDs~~Di~aa~ 151 (154)
T TIGR01549 81 IKLGIISNGS---LRAQKLLLRKH-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLP-P-EVLHVGDNLNDIEGAR 151 (154)
T ss_pred CeEEEEeCCc---hHHHHHHHHHH-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCC-C-CEEEEeCCHHHHHHHH
Confidence 9999999998 44455566665 555555555444333788874432222222211 2 5799999999999884
No 43
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.26 E-value=1.7e-12 Score=113.18 Aligned_cols=102 Identities=12% Similarity=0.006 Sum_probs=72.7
Q ss_pred CCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhh-ccchhhhhhhhccc-CCCCceeEEeechhhhHhhhhCc
Q 023352 173 APPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKH-AGFDTWEKLILKGS-SHSGETAVVYKSSERKKLEMKGY 250 (283)
Q Consensus 173 ~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~-~G~~~~~~lilr~~-~~~~KP~~~yK~~~r~~l~~~gy 250 (283)
.+++||+.++++.|+++|++++++||.+.. ....++.. .|+..+++.++.+. ...+||+|.......+++. ...
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~---~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~-~~p 158 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRL---HTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEG-FSA 158 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchh---hHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcC-CCh
Confidence 468999999999999999999999998833 33344444 36666665555544 3578998855433322221 122
Q ss_pred eEeccCccchhhhccC-ccCCccccCCCC
Q 023352 251 RIIGNIGDQWSDLLGT-NAGNRTFKLPDP 278 (283)
Q Consensus 251 ~iv~~IGDq~sDl~ga-~ag~r~fkLPNp 278 (283)
..+++|||+..|+.++ .+|.+++.++++
T Consensus 159 ~~~l~vgD~~~di~aA~~aG~~~i~~~~~ 187 (199)
T PRK09456 159 ADAVFFDDNADNIEAANALGITSILVTDK 187 (199)
T ss_pred hHeEEeCCCHHHHHHHHHcCCEEEEecCC
Confidence 4589999999999998 678888888775
No 44
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.26 E-value=2.3e-12 Score=109.22 Aligned_cols=97 Identities=21% Similarity=0.177 Sum_probs=69.3
Q ss_pred CCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhccc-CCCCceeEEeechhhhHhhhhCce
Q 023352 173 APPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGS-SHSGETAVVYKSSERKKLEMKGYR 251 (283)
Q Consensus 173 ~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~KP~~~yK~~~r~~l~~~gy~ 251 (283)
.+++||+.++++.|+++|++++++||.+.. . ...+.+.|+..+++.++.++ ...+||++.......+.+. ....
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~---~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~-~~~~ 158 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRD---H-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLG-LKPE 158 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchH---H-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcC-CCcc
Confidence 688999999999999999999999999843 2 33444478887776665543 3567888744433322221 1235
Q ss_pred EeccCccchhhhccC-ccCCcccc
Q 023352 252 IIGNIGDQWSDLLGT-NAGNRTFK 274 (283)
Q Consensus 252 iv~~IGDq~sDl~ga-~ag~r~fk 274 (283)
.+++|||+..|+.++ .+|.+++.
T Consensus 159 ~~~~vgD~~~di~aA~~~G~~~i~ 182 (183)
T TIGR01509 159 ECLFVDDSPAGIEAAKAAGMHTVL 182 (183)
T ss_pred eEEEEcCCHHHHHHHHHcCCEEEe
Confidence 689999999999998 56776653
No 45
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.25 E-value=4.4e-12 Score=108.50 Aligned_cols=127 Identities=19% Similarity=0.119 Sum_probs=81.0
Q ss_pred CceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCccccc----
Q 023352 130 GKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRN---- 205 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~---- 205 (283)
..+.++||+||||+.+..... + +.+++.|. .++||+.++|+.|+++|++++++||++...|.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~---~---~~~~~~~~--------~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~ 77 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKV---F---PTSASDWR--------FLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSA 77 (166)
T ss_pred cCcEEEEeCCCceEecCCCCc---c---cCChHHeE--------EecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccH
Confidence 357899999999997532100 0 11222221 36899999999999999999999998753222
Q ss_pred -----ccHhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhh-hhCceEeccCccch--------hhhccC-ccCC
Q 023352 206 -----VTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLE-MKGYRIIGNIGDQW--------SDLLGT-NAGN 270 (283)
Q Consensus 206 -----~T~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~-~~gy~iv~~IGDq~--------sDl~ga-~ag~ 270 (283)
.+...|+++|++. +.++.......+||++........++. ...-+.+++|||+. +|+++| ++|.
T Consensus 78 ~~~~~~i~~~l~~~gl~~-~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi 156 (166)
T TIGR01664 78 ESFKNKIEAFLEKLKVPI-QVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGL 156 (166)
T ss_pred HHHHHHHHHHHHHcCCCE-EEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCC
Confidence 3567788889864 333333333467887743322222221 01134589999996 699998 4565
Q ss_pred c
Q 023352 271 R 271 (283)
Q Consensus 271 r 271 (283)
+
T Consensus 157 ~ 157 (166)
T TIGR01664 157 E 157 (166)
T ss_pred C
Confidence 4
No 46
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.22 E-value=7.5e-12 Score=109.53 Aligned_cols=105 Identities=15% Similarity=0.069 Sum_probs=70.7
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhCc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKGY 250 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~gy 250 (283)
..+++||+.++|+.|+++|++++++||.+..... ....+...|+..+++.++.+.. ...||++........++. ...
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~-~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g-~~~ 169 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHS-AEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLG-VAP 169 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccch-hhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcC-CCH
Confidence 4578999999999999999999999998643221 2334445577666665554433 457888854322222221 112
Q ss_pred eEeccCccchhhhccC-ccCCccccCCCC
Q 023352 251 RIIGNIGDQWSDLLGT-NAGNRTFKLPDP 278 (283)
Q Consensus 251 ~iv~~IGDq~sDl~ga-~ag~r~fkLPNp 278 (283)
..+++|||+..|+.++ .+|++++.+.++
T Consensus 170 ~~~l~i~D~~~di~aA~~aG~~~i~v~~~ 198 (211)
T TIGR02247 170 EECVFLDDLGSNLKPAAALGITTIKVSDE 198 (211)
T ss_pred HHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence 3478889999999999 678888776553
No 47
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.21 E-value=2.4e-12 Score=113.42 Aligned_cols=95 Identities=12% Similarity=0.139 Sum_probs=70.7
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhh-hhhhccc-CCCCceeEEeechhhhHhhhhC
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWE-KLILKGS-SHSGETAVVYKSSERKKLEMKG 249 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~-~lilr~~-~~~~KP~~~yK~~~r~~l~~~g 249 (283)
..+++||+.++|+.| +++++++||.+ +..+...|+..|+..++ +.++.+. ....||++...... +++.|
T Consensus 86 ~~~~~~gv~~~L~~L---~~~~~ivTn~~---~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a---~~~~~ 156 (221)
T PRK10563 86 ELEPIAGANALLESI---TVPMCVVSNGP---VSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHA---AEAMN 156 (221)
T ss_pred cCCcCCCHHHHHHHc---CCCEEEEeCCc---HHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHH---HHHcC
Confidence 468899999999998 48999999987 55677888999998887 4565553 35778888554322 22223
Q ss_pred c--eEeccCccchhhhccC-ccCCccccC
Q 023352 250 Y--RIIGNIGDQWSDLLGT-NAGNRTFKL 275 (283)
Q Consensus 250 y--~iv~~IGDq~sDl~ga-~ag~r~fkL 275 (283)
. ..+++|||+++|+.+| .+|..++.+
T Consensus 157 ~~p~~~l~igDs~~di~aA~~aG~~~i~~ 185 (221)
T PRK10563 157 VNVENCILVDDSSAGAQSGIAAGMEVFYF 185 (221)
T ss_pred CCHHHeEEEeCcHhhHHHHHHCCCEEEEE
Confidence 2 3479999999999998 668777644
No 48
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.19 E-value=2.3e-11 Score=105.54 Aligned_cols=96 Identities=14% Similarity=0.067 Sum_probs=61.2
Q ss_pred CCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhh----hhhhhcccCCCCceeEEeechhhhHhh
Q 023352 171 GKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTW----EKLILKGSSHSGETAVVYKSSERKKLE 246 (283)
Q Consensus 171 ~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~----~~lilr~~~~~~KP~~~yK~~~r~~l~ 246 (283)
...+++||+.++|++|++++ +++++||.+.. .....++..|+..+ ++.++......+||+ .....+.
T Consensus 71 ~~~~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~---~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~-----~~~~a~~ 141 (197)
T PHA02597 71 RYLSAYDDALDVINKLKEDY-DFVAVTALGDS---IDALLNRQFNLNALFPGAFSEVLMCGHDESKEK-----LFIKAKE 141 (197)
T ss_pred HhccCCCCHHHHHHHHHhcC-CEEEEeCCccc---hhHHHHhhCCHHHhCCCcccEEEEeccCcccHH-----HHHHHHH
Confidence 34679999999999999875 67888987743 22334445565543 233444333333432 2223333
Q ss_pred hhCceEeccCccchhhhccC-cc--CCccccC
Q 023352 247 MKGYRIIGNIGDQWSDLLGT-NA--GNRTFKL 275 (283)
Q Consensus 247 ~~gy~iv~~IGDq~sDl~ga-~a--g~r~fkL 275 (283)
+.|.+.+++|||+.+|+.++ .+ |+.++.+
T Consensus 142 ~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~ 173 (197)
T PHA02597 142 KYGDRVVCFVDDLAHNLDAAHEALSQLPVIHM 173 (197)
T ss_pred HhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEe
Confidence 33445688999999999999 56 8877654
No 49
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=99.18 E-value=6e-11 Score=101.79 Aligned_cols=147 Identities=20% Similarity=0.252 Sum_probs=98.1
Q ss_pred cCCCceeEEEecccccccCCccccc--cCCCcccC----CchhhhhhhhcC--CCCCChhhHHHHHHHHHcCeEEEEEeC
Q 023352 127 AGDGKNIWVFDIDETSLSNLPYYAK--NGFGVKPY----NPTLFNEWVNTG--KAPPLPESLKLYKKLLLLGIKIVFLTG 198 (283)
Q Consensus 127 ~~~~~~avVFDIDgTLldn~~y~~~--~~~g~~~~----~~~~~~~~~~~~--~~~~ipga~eLl~~L~~~GikI~ivTg 198 (283)
.+..+-+|-||||+|+|-++|++.. ..|....+ ++..|++-.... -.-|.+-+++|++..+++|-+|+|+||
T Consensus 59 eG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTG 138 (237)
T COG3700 59 EGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIYFVTG 138 (237)
T ss_pred cCCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcCCeEEEEec
Confidence 4567789999999999999997642 22322222 223455544432 245777899999999999999999999
Q ss_pred CCcccccccHhhhhh-ccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCceEeccCccchhhhccCc----cCCccc
Q 023352 199 RPEDQRNVTEANLKH-AGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGTN----AGNRTF 273 (283)
Q Consensus 199 R~e~~r~~T~~~L~~-~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~ga~----ag~r~f 273 (283)
|+....+.+.+.|.+ ..+.....++..++ +.||.. ..+-..|++.+ +.+..||+.+|+.++. .|+|..
T Consensus 139 Rt~gk~d~vsk~Lak~F~i~~m~pv~f~Gd--k~k~~q---y~Kt~~i~~~~--~~IhYGDSD~Di~AAkeaG~RgIRil 211 (237)
T COG3700 139 RTPGKTDTVSKTLAKNFHITNMNPVIFAGD--KPKPGQ---YTKTQWIQDKN--IRIHYGDSDNDITAAKEAGARGIRIL 211 (237)
T ss_pred CCCCcccccchhHHhhcccCCCcceeeccC--CCCccc---ccccHHHHhcC--ceEEecCCchhhhHHHhcCccceeEE
Confidence 997766666666654 34444333444433 334322 33355676644 5578999999999872 356677
Q ss_pred cCCCCcc
Q 023352 274 KLPDPMY 280 (283)
Q Consensus 274 kLPNp~Y 280 (283)
.-||..|
T Consensus 212 RAaNSTy 218 (237)
T COG3700 212 RAANSTY 218 (237)
T ss_pred ecCCccC
Confidence 7788887
No 50
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.18 E-value=1.1e-11 Score=105.53 Aligned_cols=125 Identities=18% Similarity=0.159 Sum_probs=82.7
Q ss_pred eeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcc---------
Q 023352 132 NIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPED--------- 202 (283)
Q Consensus 132 ~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~--------- 202 (283)
++++||.||||..+.+. .|... + ....+++||+.++|++|+++|++++++||.+..
T Consensus 2 ~~~~~d~dg~l~~~~~~---------~~~~~----~--~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~ 66 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPS---------DFQVD----A--LEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQAD 66 (161)
T ss_pred CEEEEeCCCCccccCCC---------ccccC----C--HHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHH
Confidence 68999999999986431 11110 0 113478999999999999999999999997421
Q ss_pred ---cccccHhhhhhccchhhhhhhhc-----ccCCCCceeEEeechhhhHhhhhC--ceEeccCccchhhhccC-ccCCc
Q 023352 203 ---QRNVTEANLKHAGFDTWEKLILK-----GSSHSGETAVVYKSSERKKLEMKG--YRIIGNIGDQWSDLLGT-NAGNR 271 (283)
Q Consensus 203 ---~r~~T~~~L~~~G~~~~~~lilr-----~~~~~~KP~~~yK~~~r~~l~~~g--y~iv~~IGDq~sDl~ga-~ag~r 271 (283)
......+.|+.+|+. ++..+.+ .+....||.+...... ++..| .+.+++|||+++|+.++ ++|..
T Consensus 67 ~~~~~~~~~~~l~~~gl~-fd~ii~~~~~~~~~~~~~KP~~~~~~~~---~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~ 142 (161)
T TIGR01261 67 FDGPHNLMLQIFRSQGII-FDDVLICPHFPDDNCDCRKPKIKLLEPY---LKKNLIDKARSYVIGDRETDMQLAENLGIR 142 (161)
T ss_pred HHHHHHHHHHHHHHCCCc-eeEEEECCCCCCCCCCCCCCCHHHHHHH---HHHcCCCHHHeEEEeCCHHHHHHHHHCCCe
Confidence 123445668888887 3445544 2234567777333222 22222 23589999999999998 66777
Q ss_pred cccC
Q 023352 272 TFKL 275 (283)
Q Consensus 272 ~fkL 275 (283)
++.+
T Consensus 143 ~i~~ 146 (161)
T TIGR01261 143 GIQY 146 (161)
T ss_pred EEEE
Confidence 6654
No 51
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.18 E-value=2.4e-12 Score=106.92 Aligned_cols=99 Identities=25% Similarity=0.277 Sum_probs=74.2
Q ss_pred CCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcc-cCCCCceeEEeechhhhHhhhhC
Q 023352 171 GKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKG-SSHSGETAVVYKSSERKKLEMKG 249 (283)
Q Consensus 171 ~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~-~~~~~KP~~~yK~~~r~~l~~~g 249 (283)
...+++|++.++|+.|+++|++++++||.+ +......|++.|+..+++.++.. +....||++.......+++. ..
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~---~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~-~~ 149 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGS---RERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLG-IP 149 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSE---HHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHT-SS
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCC---cccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcC-CC
Confidence 567899999999999999999999999997 55667888888998766555544 34567887754433333331 12
Q ss_pred ceEeccCccchhhhccC-ccCCccc
Q 023352 250 YRIIGNIGDQWSDLLGT-NAGNRTF 273 (283)
Q Consensus 250 y~iv~~IGDq~sDl~ga-~ag~r~f 273 (283)
-..+++|||+..|+.++ .+|.+++
T Consensus 150 p~~~~~vgD~~~d~~~A~~~G~~~i 174 (176)
T PF13419_consen 150 PEEILFVGDSPSDVEAAKEAGIKTI 174 (176)
T ss_dssp GGGEEEEESSHHHHHHHHHTTSEEE
T ss_pred cceEEEEeCCHHHHHHHHHcCCeEE
Confidence 24589999999999998 6687765
No 52
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.15 E-value=9.1e-12 Score=106.87 Aligned_cols=119 Identities=13% Similarity=0.097 Sum_probs=75.3
Q ss_pred eeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccc-------
Q 023352 132 NIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQR------- 204 (283)
Q Consensus 132 ~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r------- 204 (283)
++++||.||||+...+|. ..++ ...++||+.++|++|+++|++++++||.+...+
T Consensus 2 ~~~~~D~Dgtl~~~~~~~------------~~~~------~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~ 63 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYV------------HEID------NFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQ 63 (176)
T ss_pred CEEEEeCCCCEeCCCCCC------------CCHH------HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHH
Confidence 689999999999643321 1111 346899999999999999999999999985211
Q ss_pred -----cccHhhhhhccchhhhhhhhcc-----------cCCCCceeEEeechhhhHhhhhC--ceEeccCccchhhhccC
Q 023352 205 -----NVTEANLKHAGFDTWEKLILKG-----------SSHSGETAVVYKSSERKKLEMKG--YRIIGNIGDQWSDLLGT 266 (283)
Q Consensus 205 -----~~T~~~L~~~G~~~~~~lilr~-----------~~~~~KP~~~yK~~~r~~l~~~g--y~iv~~IGDq~sDl~ga 266 (283)
......|.+.|+.. +.++... ....+||++... ...+++.| ...+++|||+++|+.+|
T Consensus 64 ~~~~~~~~~~~l~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~---~~a~~~~~~~~~~~v~VGDs~~Di~aA 139 (176)
T TIGR00213 64 FEQLTEWMDWSLAERDVDL-DGIYYCPHHPEGVEEFRQVCDCRKPKPGML---LQARKELHIDMAQSYMVGDKLEDMQAG 139 (176)
T ss_pred HHHHHHHHHHHHHHcCCCc-cEEEECCCCCcccccccCCCCCCCCCHHHH---HHHHHHcCcChhhEEEEcCCHHHHHHH
Confidence 11123344445441 2222211 223568877432 22222223 24578999999999998
Q ss_pred -ccCCcc
Q 023352 267 -NAGNRT 272 (283)
Q Consensus 267 -~ag~r~ 272 (283)
.+|.++
T Consensus 140 ~~aG~~~ 146 (176)
T TIGR00213 140 VAAKVKT 146 (176)
T ss_pred HHCCCcE
Confidence 567765
No 53
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.15 E-value=1.3e-11 Score=108.09 Aligned_cols=100 Identities=18% Similarity=0.195 Sum_probs=71.6
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhCc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKGY 250 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~gy 250 (283)
..+++||+.++|+.|+++ ++++++||.+ +......|++.|+..+++.++.... ...||++.+.....+.+.....
T Consensus 95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~---~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~ 170 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK-FRLYIVTNGV---RETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSK 170 (224)
T ss_pred cCeeCccHHHHHHHHHhc-CcEEEEeCCc---hHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCc
Confidence 357899999999999999 9999999988 4455677888999888777666544 4678887443222222200112
Q ss_pred eEeccCccch-hhhccC-ccCCccccC
Q 023352 251 RIIGNIGDQW-SDLLGT-NAGNRTFKL 275 (283)
Q Consensus 251 ~iv~~IGDq~-sDl~ga-~ag~r~fkL 275 (283)
..+++|||+. +|+.++ .+|+.++.+
T Consensus 171 ~~~v~igD~~~~di~~A~~~G~~~i~~ 197 (224)
T TIGR02254 171 EEVLMIGDSLTADIKGGQNAGLDTCWM 197 (224)
T ss_pred hheEEECCCcHHHHHHHHHCCCcEEEE
Confidence 3589999998 899998 557665443
No 54
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.14 E-value=3.3e-11 Score=103.88 Aligned_cols=105 Identities=12% Similarity=-0.026 Sum_probs=66.6
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhh-hhhcccCCCCceeEE--e----echhhhH
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEK-LILKGSSHSGETAVV--Y----KSSERKK 244 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~-lilr~~~~~~KP~~~--y----K~~~r~~ 244 (283)
..+++||+.++++.|+++|++++++||+. +..+...++..|+..++. .+...+....+|++. + |......
T Consensus 78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~~---~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~ 154 (201)
T TIGR01491 78 EISLRDYAEELVRWLKEKGLKTAIVSGGI---MCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVER 154 (201)
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEeCCc---HHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHH
Confidence 46889999999999999999999999998 556677788888765432 222222222233321 1 1112222
Q ss_pred h-hhhC--ceEeccCccchhhhccC-ccCCccccCCCCc
Q 023352 245 L-EMKG--YRIIGNIGDQWSDLLGT-NAGNRTFKLPDPM 279 (283)
Q Consensus 245 l-~~~g--y~iv~~IGDq~sDl~ga-~ag~r~fkLPNp~ 279 (283)
+ +..| ...+++|||+.+|+..+ .+|.....-|+|.
T Consensus 155 ~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~ 193 (201)
T TIGR01491 155 LKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH 193 (201)
T ss_pred HHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence 2 2223 23489999999999988 4454433336653
No 55
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.14 E-value=1.4e-11 Score=110.61 Aligned_cols=92 Identities=14% Similarity=0.153 Sum_probs=67.1
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhCc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKGY 250 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~gy 250 (283)
...++||+.++|+.|++. ++++++||.+.. ++..|+..+++.++..+. ...||++..... .+.+.|.
T Consensus 111 ~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~--------~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~---a~~~~~~ 178 (238)
T PRK10748 111 RIDVPQATHDTLKQLAKK-WPLVAITNGNAQ--------PELFGLGDYFEFVLRAGPHGRSKPFSDMYHL---AAEKLNV 178 (238)
T ss_pred cCCCCccHHHHHHHHHcC-CCEEEEECCCch--------HHHCCcHHhhceeEecccCCcCCCcHHHHHH---HHHHcCC
Confidence 367889999999999875 999999998742 467799888877776544 467888843322 2222232
Q ss_pred --eEeccCccch-hhhccC-ccCCccccC
Q 023352 251 --RIIGNIGDQW-SDLLGT-NAGNRTFKL 275 (283)
Q Consensus 251 --~iv~~IGDq~-sDl~ga-~ag~r~fkL 275 (283)
..+++|||++ .|+.|| .+|++++-+
T Consensus 179 ~~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 179 PIGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred ChhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 3589999995 999998 678777655
No 56
>PRK06769 hypothetical protein; Validated
Probab=99.12 E-value=1.3e-11 Score=106.05 Aligned_cols=126 Identities=20% Similarity=0.172 Sum_probs=79.7
Q ss_pred CceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccc-----
Q 023352 130 GKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQR----- 204 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r----- 204 (283)
+-++++||.||||--. ++ +.......++||+.++|++|+++|++++++||.+...+
T Consensus 3 ~~~~~~~d~d~~~~~~-~~------------------~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~ 63 (173)
T PRK06769 3 NIQAIFIDRDGTIGGD-TT------------------IHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATI 63 (173)
T ss_pred CCcEEEEeCCCcccCC-CC------------------CCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCH
Confidence 4679999999999411 00 11112356899999999999999999999999874211
Q ss_pred cccHhhhhhccchhhhh-hhhccc-CCCCceeEEeechhhhHhhhhCceEeccCccchhhhccC-ccCCccccC
Q 023352 205 NVTEANLKHAGFDTWEK-LILKGS-SHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGT-NAGNRTFKL 275 (283)
Q Consensus 205 ~~T~~~L~~~G~~~~~~-lilr~~-~~~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~ga-~ag~r~fkL 275 (283)
..+...|+..|+..+.. ....++ ...+||++.......+++. .....+++|||+.+|+.++ ++|..++.+
T Consensus 64 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~-~~p~~~i~IGD~~~Di~aA~~aGi~~i~v 136 (173)
T PRK06769 64 ADFVQELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHG-LDLTQCAVIGDRWTDIVAAAKVNATTILV 136 (173)
T ss_pred HHHHHHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcC-CCHHHeEEEcCCHHHHHHHHHCCCeEEEE
Confidence 12344477778765321 111222 2467888843322222221 1224589999999999988 557666543
No 57
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.12 E-value=2e-11 Score=105.00 Aligned_cols=126 Identities=17% Similarity=0.148 Sum_probs=79.9
Q ss_pred ceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccc------
Q 023352 131 KNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQR------ 204 (283)
Q Consensus 131 ~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r------ 204 (283)
.++++||.||||..+...+.+ .+. ...++||+.++|++|+++|++++++||.+...+
T Consensus 3 ~~~~~~d~~~t~~~~~~~~~~-----------~~~------~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~ 65 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDGYVK-----------SPD------EWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEA 65 (181)
T ss_pred ccEEEEECCCCcccCCccccC-----------CHH------HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHH
Confidence 478999999999776432211 112 246899999999999999999999999873210
Q ss_pred ------cccHhhhhhccchhhhhhhhcc----c-CCCCceeEEeechhhhHhhhhCceEeccCccchhhhccC-ccCCcc
Q 023352 205 ------NVTEANLKHAGFDTWEKLILKG----S-SHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGT-NAGNRT 272 (283)
Q Consensus 205 ------~~T~~~L~~~G~~~~~~lilr~----~-~~~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~ga-~ag~r~ 272 (283)
+.....|++.|+. ++.++... + ...+||++.........+. .....+++|||+.+|+.++ .+|.++
T Consensus 66 ~~~~~~~~~~~~l~~~g~~-f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~-~~~~~~~~VgDs~~Di~~A~~aG~~~ 143 (181)
T PRK08942 66 QLNALHEKMDWSLADRGGR-LDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLN-IDLAGSPMVGDSLRDLQAAAAAGVTP 143 (181)
T ss_pred HHHHHHHHHHHHHHHcCCc-cceEEECCCCCCCCCcCCCCCHHHHHHHHHHcC-CChhhEEEEeCCHHHHHHHHHCCCeE
Confidence 1122345556663 23333322 1 1357888844322222221 1234588999999999998 567765
Q ss_pred ccC
Q 023352 273 FKL 275 (283)
Q Consensus 273 fkL 275 (283)
+.+
T Consensus 144 i~v 146 (181)
T PRK08942 144 VLV 146 (181)
T ss_pred EEE
Confidence 544
No 58
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=99.12 E-value=9.9e-11 Score=96.04 Aligned_cols=75 Identities=16% Similarity=0.231 Sum_probs=62.2
Q ss_pred eeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCccccc------
Q 023352 132 NIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRN------ 205 (283)
Q Consensus 132 ~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~------ 205 (283)
++|+|||||||+.+.. .+|. ..++.+++.+.++.|+++|+.|+++|||+...+.
T Consensus 2 K~i~~DiDGTL~~~~~---------~~y~-----------~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i 61 (126)
T TIGR01689 2 KRLVMDLDNTITLTEN---------GDYA-----------NVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKI 61 (126)
T ss_pred CEEEEeCCCCcccCCC---------Cccc-----------ccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhcccccc
Confidence 6899999999986411 0121 2468899999999999999999999999987766
Q ss_pred ------ccHhhhhhccchhhhhhhhccc
Q 023352 206 ------VTEANLKHAGFDTWEKLILKGS 227 (283)
Q Consensus 206 ------~T~~~L~~~G~~~~~~lilr~~ 227 (283)
.|.+||.++|++. +.++++.+
T Consensus 62 ~~~~~~~t~~wL~k~~ipY-d~l~~~kp 88 (126)
T TIGR01689 62 NIHTLPIIILWLNQHNVPY-DEIYVGKP 88 (126)
T ss_pred chhhHHHHHHHHHHcCCCC-ceEEeCCC
Confidence 9999999999995 88999864
No 59
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.10 E-value=5e-11 Score=103.60 Aligned_cols=91 Identities=18% Similarity=0.152 Sum_probs=61.6
Q ss_pred CCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhc--ccC---CCCceeEEeechhhhHh
Q 023352 171 GKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILK--GSS---HSGETAVVYKSSERKKL 245 (283)
Q Consensus 171 ~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr--~~~---~~~KP~~~yK~~~r~~l 245 (283)
...+++||+.++++.|+++ ++++++||+. +..+...|+++|++.++...+. +++ ...++.+.-|....+.+
T Consensus 65 ~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~---~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~ 140 (205)
T PRK13582 65 ATLDPLPGAVEFLDWLRER-FQVVILSDTF---YEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKAL 140 (205)
T ss_pred HhCCCCCCHHHHHHHHHhc-CCEEEEeCCc---HHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHH
Confidence 3567899999999999999 9999999998 5567788899998865432221 111 01112223343334444
Q ss_pred hhhCceEeccCccchhhhccC
Q 023352 246 EMKGYRIIGNIGDQWSDLLGT 266 (283)
Q Consensus 246 ~~~gy~iv~~IGDq~sDl~ga 266 (283)
...+ ..+++|||+.+|+..+
T Consensus 141 ~~~~-~~~v~iGDs~~D~~~~ 160 (205)
T PRK13582 141 KSLG-YRVIAAGDSYNDTTML 160 (205)
T ss_pred HHhC-CeEEEEeCCHHHHHHH
Confidence 4333 5689999999998665
No 60
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.10 E-value=1.9e-11 Score=107.43 Aligned_cols=94 Identities=22% Similarity=0.151 Sum_probs=59.9
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhh-------cc----cCCCCceeEEeech
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLIL-------KG----SSHSGETAVVYKSS 240 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lil-------r~----~~~~~KP~~~yK~~ 240 (283)
..++.||+.++++.|+++|++++++||.. +......++..|+..++...+ .+ ....++| |..
T Consensus 83 ~~~~~~g~~~~l~~l~~~g~~~~IvS~~~---~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----k~~ 155 (219)
T TIGR00338 83 NLPLTEGAEELVKTLKEKGYKVAVISGGF---DLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASY----KGK 155 (219)
T ss_pred cCCcCCCHHHHHHHHHHCCCEEEEECCCc---HHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcc----cHH
Confidence 46789999999999999999999999987 445566777788876432111 00 0001111 222
Q ss_pred hhh-HhhhhC--ceEeccCccchhhhccC-ccCCcc
Q 023352 241 ERK-KLEMKG--YRIIGNIGDQWSDLLGT-NAGNRT 272 (283)
Q Consensus 241 ~r~-~l~~~g--y~iv~~IGDq~sDl~ga-~ag~r~ 272 (283)
... .+++.| ...+++|||+.+|+.++ .+|..+
T Consensus 156 ~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i 191 (219)
T TIGR00338 156 TLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGI 191 (219)
T ss_pred HHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeE
Confidence 222 222222 23578899999999988 445543
No 61
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.10 E-value=3.7e-11 Score=128.48 Aligned_cols=100 Identities=20% Similarity=0.172 Sum_probs=75.2
Q ss_pred CCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccch-hhhhhhhcccC-CCCceeEEeechhhhHhhhhCce
Q 023352 174 PPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFD-TWEKLILKGSS-HSGETAVVYKSSERKKLEMKGYR 251 (283)
Q Consensus 174 ~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~-~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~gy~ 251 (283)
.++||+.++|+.|+++|++++++||.. +......|++.|+. .+++.++..++ ...||+|.......+.+. ....
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~---~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lg-v~p~ 236 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSAD---RIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILG-VPTS 236 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCc---HHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcC-cCcc
Confidence 479999999999999999999999987 55667788999995 56666666554 467888854433323332 1234
Q ss_pred EeccCccchhhhccC-ccCCccccCCC
Q 023352 252 IIGNIGDQWSDLLGT-NAGNRTFKLPD 277 (283)
Q Consensus 252 iv~~IGDq~sDl~ga-~ag~r~fkLPN 277 (283)
.+++|||+.+|++++ .+|++++.+..
T Consensus 237 e~v~IgDs~~Di~AA~~aGm~~I~v~~ 263 (1057)
T PLN02919 237 ECVVIEDALAGVQAARAAGMRCIAVTT 263 (1057)
T ss_pred cEEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 589999999999999 67888876643
No 62
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.10 E-value=2e-11 Score=105.50 Aligned_cols=137 Identities=12% Similarity=0.018 Sum_probs=87.2
Q ss_pred ceeEEEecccccccCCccccccCCCcccCCchh----hhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCC-Cccccc
Q 023352 131 KNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTL----FNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGR-PEDQRN 205 (283)
Q Consensus 131 ~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~----~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR-~e~~r~ 205 (283)
++.+|||+|+|+-+..-+.-.+ .++.+.. .-.-......+++||+.++++.|+++|++++++||+ . +.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~---~~ 74 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLG----GPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDV---PE 74 (174)
T ss_pred CcEEEEeCCCCCcCcccccccC----CCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCC---hH
Confidence 4689999999998643221111 1111100 000111235688999999999999999999999998 5 44
Q ss_pred ccHhhhhhccch---------hhhhhhhcccCC-CCceeEEeechhhhHhhh-----hCceEeccCccchhhhccC-ccC
Q 023352 206 VTEANLKHAGFD---------TWEKLILKGSSH-SGETAVVYKSSERKKLEM-----KGYRIIGNIGDQWSDLLGT-NAG 269 (283)
Q Consensus 206 ~T~~~L~~~G~~---------~~~~lilr~~~~-~~KP~~~yK~~~r~~l~~-----~gy~iv~~IGDq~sDl~ga-~ag 269 (283)
.....|+..|+. .+++.++..+.. ..||.+.. ...+.+ ...+.+++|||+..|+.++ .+|
T Consensus 75 ~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i----~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aG 150 (174)
T TIGR01685 75 WAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMI----LQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYG 150 (174)
T ss_pred HHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHH----HHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhC
Confidence 556677888876 777766665432 23332211 122221 1235689999999999998 568
Q ss_pred CccccCCCC
Q 023352 270 NRTFKLPDP 278 (283)
Q Consensus 270 ~r~fkLPNp 278 (283)
.+++-++..
T Consensus 151 i~~i~v~~g 159 (174)
T TIGR01685 151 VTSCYCPSG 159 (174)
T ss_pred CEEEEcCCC
Confidence 888877543
No 63
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.08 E-value=8.6e-11 Score=103.30 Aligned_cols=100 Identities=22% Similarity=0.238 Sum_probs=75.7
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhCc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKGY 250 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~gy 250 (283)
..++.|++.++|+.|+++ ++++++||.. +......|++.|+..+++.++..+. ...||++.+.......+.- ..
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~---~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~-~p 171 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGA---RPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGV-PP 171 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCC---hHHHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCC-Cc
Confidence 368999999999999999 9999999976 5567889999999888776665543 5789999655433333321 13
Q ss_pred eEeccCccch-hhhccC-ccCCccccCC
Q 023352 251 RIIGNIGDQW-SDLLGT-NAGNRTFKLP 276 (283)
Q Consensus 251 ~iv~~IGDq~-sDl~ga-~ag~r~fkLP 276 (283)
..+++|||+. +|+.|+ .+|++++-+.
T Consensus 172 ~~~l~VgD~~~~di~gA~~~G~~~vwi~ 199 (229)
T COG1011 172 EEALFVGDSLENDILGARALGMKTVWIN 199 (229)
T ss_pred ceEEEECCChhhhhHHHHhcCcEEEEEC
Confidence 4689999998 787888 6788865443
No 64
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.08 E-value=1.3e-10 Score=99.03 Aligned_cols=99 Identities=18% Similarity=0.154 Sum_probs=67.5
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccCC---C-------Cc-------ee
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSH---S-------GE-------TA 234 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~~---~-------~K-------P~ 234 (283)
..++.||+.++++.|+++|++++++||.. +......|+..|+..++..++..+.. . .+ +.
T Consensus 70 ~~~l~~g~~~ll~~l~~~g~~~~i~S~~~---~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 146 (188)
T TIGR01489 70 SAPIDPGFKEFIAFIKEHGIDFIVISDGN---DFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPC 146 (188)
T ss_pred hCCCCccHHHHHHHHHHcCCcEEEEeCCc---HHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCC
Confidence 46899999999999999999999999988 44566778888888766555543210 0 00 01
Q ss_pred EEeechhhhHhhhhCceEeccCccchhhhccCccCCccc
Q 023352 235 VVYKSSERKKLEMKGYRIIGNIGDQWSDLLGTNAGNRTF 273 (283)
Q Consensus 235 ~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~ga~ag~r~f 273 (283)
...|......+....+..+++|||+.+|+.++.....+|
T Consensus 147 g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 147 GCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred CCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCccc
Confidence 112444444443321566899999999999986544444
No 65
>PLN02954 phosphoserine phosphatase
Probab=99.07 E-value=1.1e-10 Score=103.01 Aligned_cols=138 Identities=19% Similarity=0.236 Sum_probs=81.4
Q ss_pred CceeEEEecccccccCCccccc-cCCCc---------------ccCC-------------chhhhhhhhcCCCCCChhhH
Q 023352 130 GKNIWVFDIDETSLSNLPYYAK-NGFGV---------------KPYN-------------PTLFNEWVNTGKAPPLPESL 180 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y~~~-~~~g~---------------~~~~-------------~~~~~~~~~~~~~~~ipga~ 180 (283)
.+++|+||+||||+++..+... ..+|. .++. .+.+.++.......++||+.
T Consensus 11 ~~k~viFDfDGTL~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pg~~ 90 (224)
T PLN02954 11 SADAVCFDVDSTVCVDEGIDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFKPSLSQVEEFLEKRPPRLSPGIP 90 (224)
T ss_pred cCCEEEEeCCCcccchHHHHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHccCCCCccHH
Confidence 4789999999999986432110 01111 1110 01123333333356899999
Q ss_pred HHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchh--hhh--hhhccc-------CCCCceeEEeechh-hhHhhhh
Q 023352 181 KLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDT--WEK--LILKGS-------SHSGETAVVYKSSE-RKKLEMK 248 (283)
Q Consensus 181 eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~--~~~--lilr~~-------~~~~KP~~~yK~~~-r~~l~~~ 248 (283)
++++.|+++|++++++|+.. +..+...|+.+|++. ++. +....+ .....+...-|... +..+...
T Consensus 91 e~l~~l~~~g~~~~IvS~~~---~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~~~~~ 167 (224)
T PLN02954 91 ELVKKLRARGTDVYLVSGGF---RQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHIKKKH 167 (224)
T ss_pred HHHHHHHHCCCEEEEECCCc---HHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHHHHHHc
Confidence 99999999999999999998 556777888888863 211 111110 00000000113222 2222334
Q ss_pred CceEeccCccchhhhccCccCC
Q 023352 249 GYRIIGNIGDQWSDLLGTNAGN 270 (283)
Q Consensus 249 gy~iv~~IGDq~sDl~ga~ag~ 270 (283)
|...+++|||+.+|+.++.+|.
T Consensus 168 ~~~~~i~iGDs~~Di~aa~~~~ 189 (224)
T PLN02954 168 GYKTMVMIGDGATDLEARKPGG 189 (224)
T ss_pred CCCceEEEeCCHHHHHhhhcCC
Confidence 5566889999999999986543
No 66
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=99.06 E-value=1e-10 Score=99.29 Aligned_cols=118 Identities=24% Similarity=0.313 Sum_probs=79.8
Q ss_pred eEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhh
Q 023352 133 IWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLK 212 (283)
Q Consensus 133 avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~ 212 (283)
.|+|||||||+++... |- ..+ ..++....|++.+++++++++|++++++|||+......|..+|.
T Consensus 1 iVisDIDGTL~~sd~~------~~-~~~--------~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~ 65 (157)
T smart00775 1 IVISDIDGTITKSDVL------GH-VVP--------IIGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLS 65 (157)
T ss_pred CEEEecCCCCcccccc------cc-ccc--------ccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHH
Confidence 4899999999986311 10 000 01123457999999999999999999999999888878889998
Q ss_pred h-----ccchhhhhhhhcccCCC----C---ceeE-EeechhhhHhhh----hCceEeccCccchhhhccC
Q 023352 213 H-----AGFDTWEKLILKGSSHS----G---ETAV-VYKSSERKKLEM----KGYRIIGNIGDQWSDLLGT 266 (283)
Q Consensus 213 ~-----~G~~~~~~lilr~~~~~----~---KP~~-~yK~~~r~~l~~----~gy~iv~~IGDq~sDl~ga 266 (283)
+ .+++. ..+++++.... + ...+ .+|......+.+ .+..+++.+||..+|+..-
T Consensus 66 ~~~~~~~~lp~-g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y 135 (157)
T smart00775 66 QIKQDGHNLPH-GPVLLSPDRLFAALHREVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISY 135 (157)
T ss_pred HhhhccccCCC-ceEEEcCCcchhhhhcccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHH
Confidence 8 44653 34555554311 0 1112 356555555654 2566788899999999864
No 67
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.04 E-value=4e-10 Score=95.73 Aligned_cols=109 Identities=24% Similarity=0.337 Sum_probs=82.6
Q ss_pred CCCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCccccccc
Q 023352 128 GDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVT 207 (283)
Q Consensus 128 ~~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T 207 (283)
..|.+++++|+|+||+. ++ ...+-|.+.+.+..++++|++++++||.+++ -.
T Consensus 25 ~~Gikgvi~DlDNTLv~--------------wd-----------~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~---RV 76 (175)
T COG2179 25 AHGIKGVILDLDNTLVP--------------WD-----------NPDATPELRAWLAELKEAGIKVVVVSNNKES---RV 76 (175)
T ss_pred HcCCcEEEEeccCceec--------------cc-----------CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHH---HH
Confidence 35788999999999984 11 2456789999999999999999999998743 45
Q ss_pred HhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCce--EeccCccch-hhhccC-ccCCccccC
Q 023352 208 EANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYR--IIGNIGDQW-SDLLGT-NAGNRTFKL 275 (283)
Q Consensus 208 ~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~--iv~~IGDq~-sDl~ga-~ag~r~fkL 275 (283)
..++..+|++. |.+ ..||-+ ...|+.+++.+.. .+++||||. +|+.|+ .+|++++.+
T Consensus 77 ~~~~~~l~v~f----i~~----A~KP~~---~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV 137 (175)
T COG2179 77 ARAAEKLGVPF----IYR----AKKPFG---RAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILV 137 (175)
T ss_pred HhhhhhcCCce----eec----ccCccH---HHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEE
Confidence 67788888875 222 234433 5567777765554 599999999 999999 468888754
No 68
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=99.03 E-value=1.7e-10 Score=97.84 Aligned_cols=126 Identities=27% Similarity=0.351 Sum_probs=91.2
Q ss_pred eEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhh
Q 023352 133 IWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLK 212 (283)
Q Consensus 133 avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~ 212 (283)
.||+|||||++.+.- +|- +- -.-+.....||+.+++++++++|+++.++|+|+..+...|..||.
T Consensus 1 VVvsDIDGTiT~SD~------~G~--i~-------~~~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~ 65 (157)
T PF08235_consen 1 VVVSDIDGTITKSDV------LGH--IL-------PILGKDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLA 65 (157)
T ss_pred CEEEeccCCcCccch------hhh--hh-------hccCchhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHH
Confidence 489999999997721 110 00 001234577999999999999999999999999999999999999
Q ss_pred hc-----cchhhhhhhhcccC---------CCCceeEEeechhhhHhhhh----CceEeccCccchhhhccC-ccC---C
Q 023352 213 HA-----GFDTWEKLILKGSS---------HSGETAVVYKSSERKKLEMK----GYRIIGNIGDQWSDLLGT-NAG---N 270 (283)
Q Consensus 213 ~~-----G~~~~~~lilr~~~---------~~~KP~~~yK~~~r~~l~~~----gy~iv~~IGDq~sDl~ga-~ag---~ 270 (283)
+. ++|. -.+++.++. -.++|. .||......+... +-.+...+|++.+|+.+- .+| .
T Consensus 66 ~~~q~~~~lP~-Gpv~~sP~~l~~al~rEvi~~~p~-~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip~~ 143 (157)
T PF08235_consen 66 QHQQQGHNLPD-GPVLLSPDSLFSALHREVISKDPE-EFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIPKS 143 (157)
T ss_pred HHHhCCccCCC-CCEEECCcchhhhhhccccccChH-HHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCChh
Confidence 98 8886 445555432 122222 6888888888765 667889999999999875 233 3
Q ss_pred ccccC
Q 023352 271 RTFKL 275 (283)
Q Consensus 271 r~fkL 275 (283)
|+|.+
T Consensus 144 rIF~I 148 (157)
T PF08235_consen 144 RIFII 148 (157)
T ss_pred hEEEE
Confidence 55543
No 69
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.02 E-value=2.8e-10 Score=101.81 Aligned_cols=147 Identities=16% Similarity=0.170 Sum_probs=98.5
Q ss_pred CCceeEEEecccccccCCcccccc------CCCc-------------c----------c-CCchhhhhhhhc--------
Q 023352 129 DGKNIWVFDIDETSLSNLPYYAKN------GFGV-------------K----------P-YNPTLFNEWVNT-------- 170 (283)
Q Consensus 129 ~~~~avVFDIDgTLldn~~y~~~~------~~g~-------------~----------~-~~~~~~~~~~~~-------- 170 (283)
.+..+++||+||||+||...|.+. .+|. . . .++.+|.++..+
T Consensus 8 ~~~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~~~~~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~e~~~~~~~~ 87 (222)
T KOG2914|consen 8 LKVSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYPWDVKVKSMGKRTSEAARLFVKKLPDPVSREEFNKEEEEILDRL 87 (222)
T ss_pred cceeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCChHHHHHHHcCCCHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHh
Confidence 456799999999999997766441 1221 0 0 123333333332
Q ss_pred -CCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhcc-chhhhhhhhcccC---CCCceeEEeechhhhHh
Q 023352 171 -GKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAG-FDTWEKLILKGSS---HSGETAVVYKSSERKKL 245 (283)
Q Consensus 171 -~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G-~~~~~~lilr~~~---~~~KP~~~yK~~~r~~l 245 (283)
......||+.+|++.|+.+|+++.++|+++... ....++.++ +...++....+++ .++||+|...-..+..+
T Consensus 88 ~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~---~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l 164 (222)
T KOG2914|consen 88 FMNSILMPGAEKLVNHLKNNGIPVALATSSTSAS---FELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRL 164 (222)
T ss_pred ccccccCCcHHHHHHHHHhCCCCeeEEecCCccc---HHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhc
Confidence 567889999999999999999999999998544 344444444 4333333333332 47899996553344444
Q ss_pred hhhCceEeccCccchhhhccC-ccCCccccCCCC
Q 023352 246 EMKGYRIIGNIGDQWSDLLGT-NAGNRTFKLPDP 278 (283)
Q Consensus 246 ~~~gy~iv~~IGDq~sDl~ga-~ag~r~fkLPNp 278 (283)
....-.-+++++|+...++++ .+|+.++.+|++
T Consensus 165 ~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~ 198 (222)
T KOG2914|consen 165 GVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATP 198 (222)
T ss_pred CCCCccceEEECCCHHHHHHHHhcCCeEEEecCC
Confidence 332224589999999999999 678999988883
No 70
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.99 E-value=2.1e-10 Score=101.51 Aligned_cols=92 Identities=16% Similarity=0.030 Sum_probs=60.2
Q ss_pred CCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhh-----hhcccC-CCCceeEEe-------
Q 023352 171 GKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKL-----ILKGSS-HSGETAVVY------- 237 (283)
Q Consensus 171 ~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~l-----ilr~~~-~~~KP~~~y------- 237 (283)
...++.||+.++++.|+++|++++++||.. +..+...|++. +.. ..+ .+.++. ...||++..
T Consensus 71 ~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~---~~~i~~il~~~-~~~-~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~ 145 (219)
T PRK09552 71 ETAEIREGFHEFVQFVKENNIPFYVVSGGM---DFFVYPLLQGL-IPK-EQIYCNGSDFSGEYITITWPHPCDEHCQNHC 145 (219)
T ss_pred hCCCcCcCHHHHHHHHHHcCCeEEEECCCc---HHHHHHHHHHh-CCc-CcEEEeEEEecCCeeEEeccCCccccccccC
Confidence 357899999999999999999999999998 55666777776 543 111 122222 123454432
Q ss_pred ---echhhhHhhhhCceEeccCccchhhhccCcc
Q 023352 238 ---KSSERKKLEMKGYRIIGNIGDQWSDLLGTNA 268 (283)
Q Consensus 238 ---K~~~r~~l~~~gy~iv~~IGDq~sDl~ga~a 268 (283)
|.....++.. ....+++|||+.+|+.++.+
T Consensus 146 ~~~K~~~l~~~~~-~~~~~i~iGDs~~Di~aa~~ 178 (219)
T PRK09552 146 GCCKPSLIRKLSD-TNDFHIVIGDSITDLEAAKQ 178 (219)
T ss_pred CCchHHHHHHhcc-CCCCEEEEeCCHHHHHHHHH
Confidence 3223333322 22357899999999998843
No 71
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=98.98 E-value=3.4e-10 Score=92.64 Aligned_cols=111 Identities=13% Similarity=0.019 Sum_probs=70.3
Q ss_pred eeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCC-CcccccccHhh
Q 023352 132 NIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGR-PEDQRNVTEAN 210 (283)
Q Consensus 132 ~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR-~e~~r~~T~~~ 210 (283)
+.++||+||||++.... ..+... -+. ..+++||+.++|+.|+++|++++++||+ + +..+...
T Consensus 1 kli~~DlD~Tl~~~~~~---------~~~~~~---~~~--~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~---~~~~~~~ 63 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENI---------VVGEDP---IID--LEVTIKEIRDKLQTLKKNGFLLALASYNDD---PHVAYEL 63 (128)
T ss_pred CEEEEeCCCCCCCCCcc---------cccCCc---chh--hHHHHHHHHHHHHHHHHCCeEEEEEeCCCC---HHHHHHH
Confidence 47899999999975210 000000 000 0168999999999999999999999999 5 3345566
Q ss_pred hhhcc-------chhhhhhhhcccCCCCceeEEeechhhhHhhhhC----ceEeccCccchhhhcc
Q 023352 211 LKHAG-------FDTWEKLILKGSSHSGETAVVYKSSERKKLEMKG----YRIIGNIGDQWSDLLG 265 (283)
Q Consensus 211 L~~~G-------~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~g----y~iv~~IGDq~sDl~g 265 (283)
|+..| +..++..+..+.. .+||.+ | +..+++.| ...+++|||+..++.+
T Consensus 64 l~~~~~~~~i~~l~~~f~~~~~~~~-~pkp~~-~----~~a~~~lg~~~~p~~~l~igDs~~n~~~ 123 (128)
T TIGR01681 64 LKIFEDFGIIFPLAEYFDPLTIGYW-LPKSPR-L----VEIALKLNGVLKPKSILFVDDRPDNNEE 123 (128)
T ss_pred HHhccccccchhhHhhhhhhhhcCC-CcHHHH-H----HHHHHHhcCCCCcceEEEECCCHhHHHH
Confidence 67677 5666665555432 233332 2 22222223 3468999999988765
No 72
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=98.98 E-value=7e-11 Score=100.20 Aligned_cols=85 Identities=13% Similarity=0.133 Sum_probs=62.3
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhhhhCc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLEMKGY 250 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~~~gy 250 (283)
..+++||+.++|+ +++++||.+ +......|++.|+..+++.++..+. ...||++........++. ...
T Consensus 88 ~~~~~~g~~~~L~-------~~~i~Tn~~---~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~-~~p 156 (175)
T TIGR01493 88 NLPPWPDSAAALA-------RVAILSNAS---HWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVG-LPP 156 (175)
T ss_pred cCCCCCchHHHHH-------HHhhhhCCC---HHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHC-CCH
Confidence 4678999999998 378999988 5556778899999988877776654 578898854422222221 112
Q ss_pred eEeccCccchhhhccCc
Q 023352 251 RIIGNIGDQWSDLLGTN 267 (283)
Q Consensus 251 ~iv~~IGDq~sDl~ga~ 267 (283)
..+++|||+..|+.|+.
T Consensus 157 ~~~l~vgD~~~Di~~A~ 173 (175)
T TIGR01493 157 DRVLMVAAHQWDLIGAR 173 (175)
T ss_pred HHeEeEecChhhHHHHh
Confidence 45899999999999985
No 73
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=98.97 E-value=3.6e-10 Score=94.62 Aligned_cols=128 Identities=15% Similarity=-0.004 Sum_probs=80.2
Q ss_pred CceeEEEecccccccCCccc----cccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCccccc
Q 023352 130 GKNIWVFDIDETSLSNLPYY----AKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRN 205 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y~----~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~ 205 (283)
++..+|+|+||||+.+..-- ....++. .+. ...-.......++||+.++|+.|+ ++++++++|+.+ +.
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~---~~ 72 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIV-PVL---IDGHPHGVYVKKRPGVDEFLKRAS-ELFELVVFTAGL---RM 72 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEE-EEE---eCCceEEEEEEECCCHHHHHHHHH-hccEEEEEeCCc---HH
Confidence 36789999999999974200 0000000 000 000011123568999999999998 689999999999 55
Q ss_pred ccHhhhhhccchh-hhhhhhccc-CCCCceeEEeechhhhHhhhhCceEeccCccchhhhccCc-cC
Q 023352 206 VTEANLKHAGFDT-WEKLILKGS-SHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGTN-AG 269 (283)
Q Consensus 206 ~T~~~L~~~G~~~-~~~lilr~~-~~~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~ga~-ag 269 (283)
.+...|+..|+.. ++..++..+ ...+||+ ..|...+... ..+.+++|||+..|+..+. +|
T Consensus 73 ~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l~~---~p~~~i~i~Ds~~~~~aa~~ng 135 (148)
T smart00577 73 YADPVLDLLDPKKYFGYRRLFRDECVFVKGK-YVKDLSLLGR---DLSNVIIIDDSPDSWPFHPENL 135 (148)
T ss_pred HHHHHHHHhCcCCCEeeeEEECccccccCCe-EeecHHHcCC---ChhcEEEEECCHHHhhcCccCE
Confidence 5667777778753 345555444 3567876 2333222222 2356899999999999984 44
No 74
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.97 E-value=1.3e-10 Score=98.03 Aligned_cols=115 Identities=22% Similarity=0.292 Sum_probs=71.8
Q ss_pred eeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhh
Q 023352 132 NIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANL 211 (283)
Q Consensus 132 ~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L 211 (283)
++++|||||||+++..++...+ +....| ...++. .+++|+++|++++++||++ +..+...|
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~--------~~~~~~------~~~~~~--~i~~Lk~~G~~i~IvTn~~---~~~~~~~l 62 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIYYTNNG--------EEIKAF------NVRDGY--GIRCALKSGIEVAIITGRK---AKLVEDRC 62 (154)
T ss_pred eEEEEeCceeEEcCeEEECCCC--------cEEEEE------echhHH--HHHHHHHCCCEEEEEECCC---CHHHHHHH
Confidence 6899999999999765443321 000001 011222 7999999999999999999 45667888
Q ss_pred hhccchhhhhhhhcccCCCCceeEEeechhhhHhhhh--CceEeccCccchhhhccCc-cCCccccCCC
Q 023352 212 KHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMK--GYRIIGNIGDQWSDLLGTN-AGNRTFKLPD 277 (283)
Q Consensus 212 ~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~--gy~iv~~IGDq~sDl~ga~-ag~r~fkLPN 277 (283)
++.|+..++. . ..+||.. . ...+... ..+.+++|||+.+|+..+. +|. .|.+.|
T Consensus 63 ~~~gi~~~~~----~--~~~k~~~--~---~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~-~~~v~~ 119 (154)
T TIGR01670 63 KTLGITHLYQ----G--QSNKLIA--F---SDILEKLALAPENVAYIGDDLIDWPVMEKVGL-SVAVAD 119 (154)
T ss_pred HHcCCCEEEe----c--ccchHHH--H---HHHHHHcCCCHHHEEEECCCHHHHHHHHHCCC-eEecCC
Confidence 9999986532 1 1233222 1 2222222 2345899999999999873 443 354443
No 75
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.91 E-value=2.8e-10 Score=97.84 Aligned_cols=117 Identities=15% Similarity=0.154 Sum_probs=76.8
Q ss_pred ceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhh
Q 023352 131 KNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEAN 210 (283)
Q Consensus 131 ~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~ 210 (283)
.+++|||+|||+.|+.-|+...+-.-..|+.. .| .-++.|+++|++++++||++ ...+...
T Consensus 7 i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~--------------D~--~~~~~L~~~Gi~laIiT~k~---~~~~~~~ 67 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIVINDEGIESRNFDIK--------------DG--MGVIVLQLCGIDVAIITSKK---SGAVRHR 67 (169)
T ss_pred CeEEEEeCceeeECCeEEEcCCCcEEEEEecc--------------hH--HHHHHHHHCCCEEEEEECCC---cHHHHHH
Confidence 68999999999999877765543322223311 11 23677889999999999998 5577888
Q ss_pred hhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhC--ceEeccCccchhhhccCccCCccccCCC
Q 023352 211 LKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKG--YRIIGNIGDQWSDLLGTNAGNRTFKLPD 277 (283)
Q Consensus 211 L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~g--y~iv~~IGDq~sDl~ga~ag~r~fkLPN 277 (283)
|+++|+..++..+ ++||.. .+..++..| .+.+++|||+.+|+.++......|..+|
T Consensus 68 l~~lgi~~~f~~~------kpkp~~-----~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~n 125 (169)
T TIGR02726 68 AEELKIKRFHEGI------KKKTEP-----YAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGD 125 (169)
T ss_pred HHHCCCcEEEecC------CCCHHH-----HHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcC
Confidence 9999998765421 233321 222233333 2458999999999998843334444444
No 76
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=98.89 E-value=9.2e-10 Score=104.82 Aligned_cols=131 Identities=16% Similarity=0.183 Sum_probs=83.5
Q ss_pred CceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCc--------
Q 023352 130 GKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPE-------- 201 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e-------- 201 (283)
+++.++||.||||..... ..|... .....+++||+.++|++|+++|++++++||.+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~---------~~y~~~------~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~ 65 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPP---------TDFQVD------SLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQ 65 (354)
T ss_pred CCcEEEEeCCCCccCCCC---------cccccc------CcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccH
Confidence 367899999999998532 001000 012368999999999999999999999999521
Q ss_pred c----cccccHhhhhhccchhhhhhhhcc-----cCCCCceeEEeechhhhHhhhhCceEeccCccchhhhccC-ccCCc
Q 023352 202 D----QRNVTEANLKHAGFDTWEKLILKG-----SSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGT-NAGNR 271 (283)
Q Consensus 202 ~----~r~~T~~~L~~~G~~~~~~lilr~-----~~~~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~ga-~ag~r 271 (283)
+ .+......|+..|+. .+.+++.+ +...+||++.........+. ...+.+++|||+.+|+.++ ++|++
T Consensus 66 ~~l~~~~~~i~~iL~~~gl~-fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~-v~~~~svmIGDs~sDi~aAk~aGi~ 143 (354)
T PRK05446 66 EDFDPPHNLMMQIFESQGIK-FDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGA-IDLANSYVIGDRETDVQLAENMGIK 143 (354)
T ss_pred HHHhhHHHHHHHHHHHcCCc-eeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcC-CCcccEEEEcCCHHHHHHHHHCCCe
Confidence 0 123455667777875 23444442 22356777633222212211 1225689999999999998 67877
Q ss_pred cccCCCC
Q 023352 272 TFKLPDP 278 (283)
Q Consensus 272 ~fkLPNp 278 (283)
++.+ ||
T Consensus 144 ~I~v-~~ 149 (354)
T PRK05446 144 GIRY-AR 149 (354)
T ss_pred EEEE-EC
Confidence 6654 44
No 77
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=98.86 E-value=3.3e-09 Score=83.61 Aligned_cols=64 Identities=27% Similarity=0.433 Sum_probs=51.3
Q ss_pred EEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhh
Q 023352 134 WVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKH 213 (283)
Q Consensus 134 vVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~ 213 (283)
++||+||||... ..++||+.++++.|+++|.+++|+||.+...++...+.|++
T Consensus 1 ~l~D~dGvl~~g---------------------------~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~ 53 (101)
T PF13344_consen 1 FLFDLDGVLYNG---------------------------NEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKK 53 (101)
T ss_dssp EEEESTTTSEET---------------------------TEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHH
T ss_pred CEEeCccEeEeC---------------------------CCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHh
Confidence 689999999863 35899999999999999999999999998888889999999
Q ss_pred ccchhhhhhhh
Q 023352 214 AGFDTWEKLIL 224 (283)
Q Consensus 214 ~G~~~~~~lil 224 (283)
+||+.-.+-++
T Consensus 54 ~Gi~~~~~~i~ 64 (101)
T PF13344_consen 54 LGIPVDEDEII 64 (101)
T ss_dssp TTTT--GGGEE
T ss_pred cCcCCCcCEEE
Confidence 99986333333
No 78
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=98.83 E-value=2.1e-09 Score=92.00 Aligned_cols=111 Identities=17% Similarity=0.216 Sum_probs=75.2
Q ss_pred CCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccH
Q 023352 129 DGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTE 208 (283)
Q Consensus 129 ~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~ 208 (283)
.+.+++++|+|||++.. ....++|++.++|+.|+++|++++++||.+.. ....
T Consensus 23 ~~v~~vv~D~Dgtl~~~-------------------------~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~--~~~~ 75 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYP-------------------------DHNEAYPALRDWIEELKAAGRKLLIVSNNAGE--QRAK 75 (170)
T ss_pred CCCCEEEEecCCccccC-------------------------CCCCcChhHHHHHHHHHHcCCEEEEEeCCchH--HHHH
Confidence 46789999999998853 12468899999999999999999999998731 2233
Q ss_pred hhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCceEeccCccch-hhhccC-ccCCccccC
Q 023352 209 ANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQW-SDLLGT-NAGNRTFKL 275 (283)
Q Consensus 209 ~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~-sDl~ga-~ag~r~fkL 275 (283)
..++..|+..+. ...||++.......+++. ..-..+++|||+. +|+.+| .+|.+++.+
T Consensus 76 ~~~~~~gl~~~~--------~~~KP~p~~~~~~l~~~~-~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v 135 (170)
T TIGR01668 76 AVEKALGIPVLP--------HAVKPPGCAFRRAHPEMG-LTSEQVAVVGDRLFTDVMGGNRNGSYTILV 135 (170)
T ss_pred HHHHHcCCEEEc--------CCCCCChHHHHHHHHHcC-CCHHHEEEECCcchHHHHHHHHcCCeEEEE
Confidence 444556664321 234776643322222221 1123489999998 799999 567776654
No 79
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.76 E-value=2e-09 Score=93.21 Aligned_cols=112 Identities=21% Similarity=0.267 Sum_probs=70.7
Q ss_pred CceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHh
Q 023352 130 GKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEA 209 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~ 209 (283)
+.+.++||+||||+++.-|+...+ ..+..|... . ..-++.|+++|++++++|||+ ...+..
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~~~~--------~~~~~~~~~------d--~~~i~~L~~~Gi~v~I~T~~~---~~~v~~ 80 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMGNNG--------EELKAFNVR------D--GYGIRCLLTSGIEVAIITGRK---SKLVED 80 (183)
T ss_pred CceEEEEcCCeeeecCEEEEcCCC--------CEEEEEecc------c--hHHHHHHHHCCCEEEEEeCCC---cHHHHH
Confidence 578999999999999743322211 011111110 0 135677888999999999998 456677
Q ss_pred hhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhC--ceEeccCccchhhhccC-ccCCc
Q 023352 210 NLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKG--YRIIGNIGDQWSDLLGT-NAGNR 271 (283)
Q Consensus 210 ~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~g--y~iv~~IGDq~sDl~ga-~ag~r 271 (283)
.+++.|+..++. + ...|+ ...+..+++.| ...+++|||+.+|+..+ .+|..
T Consensus 81 ~l~~lgl~~~f~----g--~~~k~-----~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~ 134 (183)
T PRK09484 81 RMTTLGITHLYQ----G--QSNKL-----IAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLS 134 (183)
T ss_pred HHHHcCCceeec----C--CCcHH-----HHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 888889876442 1 12232 22233333334 34689999999999988 45654
No 80
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.72 E-value=1.6e-08 Score=93.56 Aligned_cols=80 Identities=16% Similarity=0.272 Sum_probs=62.6
Q ss_pred CCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCC-hhhHHHHHHHHHcCeEEEEEeCCCccccccc
Q 023352 129 DGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPL-PESLKLYKKLLLLGIKIVFLTGRPEDQRNVT 207 (283)
Q Consensus 129 ~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~i-pga~eLl~~L~~~GikI~ivTgR~e~~r~~T 207 (283)
.-++.|+||+||||++... +.... ||+.++|++|+++|++++++|++. |...
T Consensus 124 ~~~kvIvFDLDgTLi~~~~------------------------~v~irdPgV~EaL~~LkekGikLaIaTS~~---Re~v 176 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDEE------------------------PVRIRDPRIYDSLTELKKRGCILVLWSYGD---RDHV 176 (301)
T ss_pred ccceEEEEecCCCCcCCCC------------------------ccccCCHHHHHHHHHHHHCCCEEEEEECCC---HHHH
Confidence 3577999999999997521 22233 999999999999999999999998 5666
Q ss_pred HhhhhhccchhhhhhhhcccC-CCCceeE
Q 023352 208 EANLKHAGFDTWEKLILKGSS-HSGETAV 235 (283)
Q Consensus 208 ~~~L~~~G~~~~~~lilr~~~-~~~KP~~ 235 (283)
...|++.|+..+++.++.+.+ .+.||++
T Consensus 177 ~~~L~~lGLd~YFdvIIs~Gdv~~~kp~~ 205 (301)
T TIGR01684 177 VESMRKVKLDRYFDIIISGGHKAEEYSTM 205 (301)
T ss_pred HHHHHHcCCCcccCEEEECCccccCCCCc
Confidence 789999999988877776544 3444544
No 81
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.67 E-value=1.1e-08 Score=90.43 Aligned_cols=97 Identities=14% Similarity=-0.020 Sum_probs=60.3
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhh---hhhhcccC-CCCceeEEe----------
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWE---KLILKGSS-HSGETAVVY---------- 237 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~---~lilr~~~-~~~KP~~~y---------- 237 (283)
..++.||+.++++.|+++|++++++|+.. +......|+..+..... ++...+.. ...+|++..
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~---~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~ 144 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGM---DFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCC 144 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCc---HHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCC
Confidence 57899999999999999999999999997 44555666665332211 22222221 123343321
Q ss_pred echhhhHhhhhCceEeccCccchhhhccCccCCcc
Q 023352 238 KSSERKKLEMKGYRIIGNIGDQWSDLLGTNAGNRT 272 (283)
Q Consensus 238 K~~~r~~l~~~gy~iv~~IGDq~sDl~ga~ag~r~ 272 (283)
|....+++... .+.+++|||+.+|+.++..+..+
T Consensus 145 K~~~l~~~~~~-~~~~i~iGDg~~D~~~a~~Ad~~ 178 (214)
T TIGR03333 145 KPSLIRKLSEP-NDYHIVIGDSVTDVEAAKQSDLC 178 (214)
T ss_pred HHHHHHHHhhc-CCcEEEEeCCHHHHHHHHhCCee
Confidence 33333333322 34468999999999988443333
No 82
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.66 E-value=2.1e-08 Score=90.18 Aligned_cols=71 Identities=14% Similarity=0.358 Sum_probs=56.0
Q ss_pred CCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccH
Q 023352 129 DGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTE 208 (283)
Q Consensus 129 ~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~ 208 (283)
+..++++||+|||+.+. ..++||+.+++++|+++|++++|+||++.. +....
T Consensus 6 ~~~~~~~~D~dG~l~~~---------------------------~~~~pga~e~L~~L~~~G~~~~ivTN~~~~-~~~~~ 57 (242)
T TIGR01459 6 NDYDVFLLDLWGVIIDG---------------------------NHTYPGAVQNLNKIIAQGKPVYFVSNSPRN-IFSLH 57 (242)
T ss_pred hcCCEEEEecccccccC---------------------------CccCccHHHHHHHHHHCCCEEEEEeCCCCC-hHHHH
Confidence 34679999999999864 357999999999999999999999997632 22233
Q ss_pred hhhhhccchh-hhhhhhccc
Q 023352 209 ANLKHAGFDT-WEKLILKGS 227 (283)
Q Consensus 209 ~~L~~~G~~~-~~~lilr~~ 227 (283)
+.|+++|++. +++.++.+.
T Consensus 58 ~~L~~~gl~~~~~~~Ii~s~ 77 (242)
T TIGR01459 58 KTLKSLGINADLPEMIISSG 77 (242)
T ss_pred HHHHHCCCCccccceEEccH
Confidence 7899999986 666666543
No 83
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.64 E-value=1.9e-08 Score=88.85 Aligned_cols=90 Identities=18% Similarity=0.145 Sum_probs=61.4
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhh--hhhcccC-CCCc--eeEEeechhhhHhh
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEK--LILKGSS-HSGE--TAVVYKSSERKKLE 246 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~--lilr~~~-~~~K--P~~~yK~~~r~~l~ 246 (283)
..++.||+.++++.|++.| +++++||.. +..+...+++.|+..++. +...+.+ ..+. ..+.-|....+.+.
T Consensus 66 ~i~l~pga~ell~~lk~~~-~~~IVS~~~---~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~ 141 (203)
T TIGR02137 66 TLKPLEGAVEFVDWLRERF-QVVILSDTF---YEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFK 141 (203)
T ss_pred hCCCCccHHHHHHHHHhCC-eEEEEeCCh---HHHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHH
Confidence 4578999999999999975 999999998 557778889999986432 3322201 1111 01122444445555
Q ss_pred hhCceEeccCccchhhhccC
Q 023352 247 MKGYRIIGNIGDQWSDLLGT 266 (283)
Q Consensus 247 ~~gy~iv~~IGDq~sDl~ga 266 (283)
+.|. .+++|||+.+|+...
T Consensus 142 ~~~~-~~v~vGDs~nDl~ml 160 (203)
T TIGR02137 142 SLYY-RVIAAGDSYNDTTML 160 (203)
T ss_pred hhCC-CEEEEeCCHHHHHHH
Confidence 5554 578999999999876
No 84
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=98.63 E-value=1.5e-08 Score=101.02 Aligned_cols=122 Identities=17% Similarity=0.104 Sum_probs=79.0
Q ss_pred CCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCccc-----
Q 023352 129 DGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQ----- 203 (283)
Q Consensus 129 ~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~----- 203 (283)
...+++.||+||||+.+.... .| +.+++.|. .++||+.+.|+.|++.|++|+|+||.+.-.
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~---~~---~~~~~d~~--------~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~ 231 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGK---VF---PKGPDDWQ--------IIFPEIPEKLKELEADGFKICIFTNQGGIARGKIN 231 (526)
T ss_pred ccCcEEEEECCCCccccCCCc---cC---CCCHHHee--------ecccCHHHHHHHHHHCCCEEEEEECCcccccCccc
Confidence 456899999999999763210 01 12333332 257999999999999999999999987521
Q ss_pred ----ccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechhhhHhh---hhCceEeccCccchhhhccC
Q 023352 204 ----RNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSERKKLE---MKGYRIIGNIGDQWSDLLGT 266 (283)
Q Consensus 204 ----r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~r~~l~---~~gy~iv~~IGDq~sDl~ga 266 (283)
...+...|+++|++ +.+++.... ..+||.+..-......+. .....-+++|||...|+.++
T Consensus 232 ~~~~~~ki~~iL~~lgip--fdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g 300 (526)
T TIGR01663 232 ADDFKAKIEAIVAKLGVP--FQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANG 300 (526)
T ss_pred HHHHHHHHHHHHHHcCCc--eEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHH
Confidence 12356778888987 345555443 467887743222222221 01123479999999999764
No 85
>PLN02811 hydrolase
Probab=98.60 E-value=1.7e-08 Score=89.32 Aligned_cols=104 Identities=19% Similarity=0.232 Sum_probs=73.0
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhccc--C-CCCceeEEeechhhhHhhh-
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGS--S-HSGETAVVYKSSERKKLEM- 247 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~--~-~~~KP~~~yK~~~r~~l~~- 247 (283)
..+++||+.++|+.|+++|++++++||.... ......++..|+..+++.++..+ + ..+||+|........++..
T Consensus 76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~--~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~ 153 (220)
T PLN02811 76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKR--HFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDG 153 (220)
T ss_pred hCCCCccHHHHHHHHHHCCCcEEEEeCCchh--hHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCC
Confidence 4678999999999999999999999998732 12333444457766776666655 3 3678888544333333320
Q ss_pred -hCceEeccCccchhhhccC-ccCCccccCCC
Q 023352 248 -KGYRIIGNIGDQWSDLLGT-NAGNRTFKLPD 277 (283)
Q Consensus 248 -~gy~iv~~IGDq~sDl~ga-~ag~r~fkLPN 277 (283)
.....+++|||+.+|+.++ .+|.+++-+++
T Consensus 154 ~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~ 185 (220)
T PLN02811 154 PVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPD 185 (220)
T ss_pred CCCccceEEEeccHhhHHHHHHCCCeEEEEeC
Confidence 1135689999999999999 67888877754
No 86
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.60 E-value=2.6e-08 Score=93.91 Aligned_cols=90 Identities=23% Similarity=0.233 Sum_probs=57.1
Q ss_pred CCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhh--h-----hhcc----cCCCCceeEEeec
Q 023352 171 GKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEK--L-----ILKG----SSHSGETAVVYKS 239 (283)
Q Consensus 171 ~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~--l-----ilr~----~~~~~KP~~~yK~ 239 (283)
...++.||+.++++.|++.|++++++||.... .+...+++.|+..... + .+++ +...+| .|.
T Consensus 178 ~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~---~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k----~K~ 250 (322)
T PRK11133 178 ENLPLMPGLTELVLKLQALGWKVAIASGGFTY---FADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQ----YKA 250 (322)
T ss_pred HhCCCChhHHHHHHHHHHcCCEEEEEECCcch---hHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcc----cHH
Confidence 35789999999999999999999999999843 3445556667753211 1 0111 001112 233
Q ss_pred hhhhHh-hhhC--ceEeccCccchhhhccCc
Q 023352 240 SERKKL-EMKG--YRIIGNIGDQWSDLLGTN 267 (283)
Q Consensus 240 ~~r~~l-~~~g--y~iv~~IGDq~sDl~ga~ 267 (283)
...+++ ++.| ...+++|||+.+|+....
T Consensus 251 ~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~ 281 (322)
T PRK11133 251 DTLTRLAQEYEIPLAQTVAIGDGANDLPMIK 281 (322)
T ss_pred HHHHHHHHHcCCChhhEEEEECCHHHHHHHH
Confidence 333333 2333 346899999999999873
No 87
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=98.57 E-value=8.8e-08 Score=86.41 Aligned_cols=103 Identities=16% Similarity=0.123 Sum_probs=77.3
Q ss_pred CCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhh-cccCCCCceeEEeechhhhHhhhhCce
Q 023352 173 APPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLIL-KGSSHSGETAVVYKSSERKKLEMKGYR 251 (283)
Q Consensus 173 ~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lil-r~~~~~~KP~~~yK~~~r~~l~~~gy~ 251 (283)
-..+.+++++++.|+++|..+.++||-+...+ ..|...|+..|++.++ +....-.||+|.++......+.- .-.
T Consensus 112 ~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~----~~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v-~Pe 186 (237)
T KOG3085|consen 112 WKYLDGMQELLQKLRKKGTILGIISNFDDRLR----LLLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGV-KPE 186 (237)
T ss_pred ceeccHHHHHHHHHHhCCeEEEEecCCcHHHH----HHhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCC-ChH
Confidence 35678999999999999999999999886544 5667778877665544 45556789999665433333321 245
Q ss_pred EeccCccch-hhhccC-ccCCccccCCCCcc
Q 023352 252 IIGNIGDQW-SDLLGT-NAGNRTFKLPDPMY 280 (283)
Q Consensus 252 iv~~IGDq~-sDl~ga-~ag~r~fkLPNp~Y 280 (283)
.|+.|||.. +|+.|| +.|.+++.+-|+++
T Consensus 187 e~vhIgD~l~nD~~gA~~~G~~ailv~~~~~ 217 (237)
T KOG3085|consen 187 ECVHIGDLLENDYEGARNLGWHAILVDNSIT 217 (237)
T ss_pred HeEEecCccccccHhHHHcCCEEEEEccccc
Confidence 689999999 999999 67889888777664
No 88
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.57 E-value=5.8e-08 Score=82.03 Aligned_cols=93 Identities=22% Similarity=0.138 Sum_probs=60.3
Q ss_pred CCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcc--cC-CC----Cc--eeEEeechh
Q 023352 171 GKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKG--SS-HS----GE--TAVVYKSSE 241 (283)
Q Consensus 171 ~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~--~~-~~----~K--P~~~yK~~~ 241 (283)
...++.||+.++++.++++|++++++|+.. +..+...++.+|+..+..-.+.- ++ .. ++ +...-|...
T Consensus 70 ~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~---~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~ 146 (177)
T TIGR01488 70 RQVALRPGARELISWLKERGIDTVIVSGGF---DFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKV 146 (177)
T ss_pred hcCCcCcCHHHHHHHHHHCCCEEEEECCCc---HHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHH
Confidence 456688999999999999999999999998 55677888888887532211111 11 01 11 111234333
Q ss_pred hhHhhh-hC--ceEeccCccchhhhccC
Q 023352 242 RKKLEM-KG--YRIIGNIGDQWSDLLGT 266 (283)
Q Consensus 242 r~~l~~-~g--y~iv~~IGDq~sDl~ga 266 (283)
.+++.+ .| +..+++|||+.+|+...
T Consensus 147 l~~~~~~~~~~~~~~~~iGDs~~D~~~~ 174 (177)
T TIGR01488 147 LKELLEESKITLKKIIAVGDSVNDLPML 174 (177)
T ss_pred HHHHHHHhCCCHHHEEEEeCCHHHHHHH
Confidence 333322 22 44589999999998764
No 89
>PLN02645 phosphoglycolate phosphatase
Probab=98.56 E-value=6.4e-08 Score=90.57 Aligned_cols=67 Identities=19% Similarity=0.287 Sum_probs=56.6
Q ss_pred CceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHh
Q 023352 130 GKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEA 209 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~ 209 (283)
..++++||+||||++. ..++||+.++++.|+++|++++|+|||+...+....+
T Consensus 27 ~~~~~~~D~DGtl~~~---------------------------~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~ 79 (311)
T PLN02645 27 SVETFIFDCDGVIWKG---------------------------DKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGK 79 (311)
T ss_pred hCCEEEEeCcCCeEeC---------------------------CccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHH
Confidence 4679999999999864 2478999999999999999999999999877777788
Q ss_pred hhhhccchhhhhhh
Q 023352 210 NLKHAGFDTWEKLI 223 (283)
Q Consensus 210 ~L~~~G~~~~~~li 223 (283)
.|+++||....+-+
T Consensus 80 ~l~~lGi~~~~~~I 93 (311)
T PLN02645 80 KFESLGLNVTEEEI 93 (311)
T ss_pred HHHHCCCCCChhhE
Confidence 89999997644333
No 90
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=98.53 E-value=1.3e-07 Score=86.17 Aligned_cols=64 Identities=20% Similarity=0.263 Sum_probs=53.5
Q ss_pred eeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhh
Q 023352 132 NIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANL 211 (283)
Q Consensus 132 ~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L 211 (283)
+.++||+||||++... ....++|++.+.++.|+++|++++|+|||+...++...+.|
T Consensus 2 k~i~~D~DGtl~~~~~-----------------------~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l 58 (257)
T TIGR01458 2 KGVLLDISGVLYISDA-----------------------KSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERL 58 (257)
T ss_pred CEEEEeCCCeEEeCCC-----------------------cccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH
Confidence 5799999999986410 01137999999999999999999999999987777788899
Q ss_pred hhccchh
Q 023352 212 KHAGFDT 218 (283)
Q Consensus 212 ~~~G~~~ 218 (283)
+..|++.
T Consensus 59 ~~~g~~~ 65 (257)
T TIGR01458 59 QRLGFDI 65 (257)
T ss_pred HHcCCCC
Confidence 9999974
No 91
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.53 E-value=8.1e-08 Score=83.21 Aligned_cols=103 Identities=19% Similarity=0.090 Sum_probs=65.6
Q ss_pred CCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhh--hhhcccC-CCCcee-E----Eeech-hhh
Q 023352 173 APPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEK--LILKGSS-HSGETA-V----VYKSS-ERK 243 (283)
Q Consensus 173 ~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~--lilr~~~-~~~KP~-~----~yK~~-~r~ 243 (283)
..+.|++.++++.++++|++++++|+.++ ......++..|+..++. +....++ ..+++. + .-|.. .+.
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~---~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~ 162 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLT---ILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAE 162 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcH---HHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHH
Confidence 46899999999999999999999999984 45566677778875422 2221111 122221 1 11222 222
Q ss_pred HhhhhCc--eEeccCccchhhhccC-ccCCccccCCCC
Q 023352 244 KLEMKGY--RIIGNIGDQWSDLLGT-NAGNRTFKLPDP 278 (283)
Q Consensus 244 ~l~~~gy--~iv~~IGDq~sDl~ga-~ag~r~fkLPNp 278 (283)
.+.+.+. ..++++||+.+|+... .+|..+..-|+|
T Consensus 163 ~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~~~ 200 (202)
T TIGR01490 163 LLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNPDK 200 (202)
T ss_pred HHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCCCC
Confidence 2333343 3578899999999987 456666666765
No 92
>PRK10444 UMP phosphatase; Provisional
Probab=98.52 E-value=1.3e-07 Score=85.90 Aligned_cols=60 Identities=22% Similarity=0.381 Sum_probs=53.5
Q ss_pred eeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhh
Q 023352 132 NIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANL 211 (283)
Q Consensus 132 ~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L 211 (283)
+.++||+||||++. ..++|++.++++.|+++|.+++|+|||+...+....+.|
T Consensus 2 ~~v~~DlDGtL~~~---------------------------~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 2 KNVICDIDGVLMHD---------------------------NVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred cEEEEeCCCceEeC---------------------------CeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 57999999999864 257899999999999999999999999987778888999
Q ss_pred hhccchh
Q 023352 212 KHAGFDT 218 (283)
Q Consensus 212 ~~~G~~~ 218 (283)
+..||+.
T Consensus 55 ~~~G~~~ 61 (248)
T PRK10444 55 ATAGVDV 61 (248)
T ss_pred HHcCCCC
Confidence 9999964
No 93
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=98.51 E-value=2.2e-07 Score=85.51 Aligned_cols=103 Identities=22% Similarity=0.407 Sum_probs=73.2
Q ss_pred CCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccH
Q 023352 129 DGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTE 208 (283)
Q Consensus 129 ~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~ 208 (283)
+..++++||+||||... ..++||+.+++++|+++|.+++|+||++...++...
T Consensus 6 ~~y~~~l~DlDGvl~~G---------------------------~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~ 58 (269)
T COG0647 6 DKYDGFLFDLDGVLYRG---------------------------NEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVA 58 (269)
T ss_pred hhcCEEEEcCcCceEeC---------------------------CccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Confidence 45678999999999853 468999999999999999999999999998888788
Q ss_pred hhhhh-ccchh-hhhhhhcccC------CCCceeEEee---chhhhHhhhhCceEeccCcc
Q 023352 209 ANLKH-AGFDT-WEKLILKGSS------HSGETAVVYK---SSERKKLEMKGYRIIGNIGD 258 (283)
Q Consensus 209 ~~L~~-~G~~~-~~~lilr~~~------~~~KP~~~yK---~~~r~~l~~~gy~iv~~IGD 258 (283)
+.|+. .|.+. +++++.++.. .+.++...|. ...+..++..|+.++....+
T Consensus 59 ~~L~~~~~~~~~~~~i~TS~~at~~~l~~~~~~~kv~viG~~~l~~~l~~~G~~~~~~~~~ 119 (269)
T COG0647 59 ARLSSLGGVDVTPDDIVTSGDATADYLAKQKPGKKVYVIGEEGLKEELEGAGFELVDEEEP 119 (269)
T ss_pred HHHHhhcCCCCCHHHeecHHHHHHHHHHhhCCCCEEEEECCcchHHHHHhCCcEEeccCCC
Confidence 88888 45533 3444333221 1111233443 55667777778776554444
No 94
>PRK08238 hypothetical protein; Validated
Probab=98.48 E-value=1.9e-07 Score=92.41 Aligned_cols=85 Identities=20% Similarity=0.187 Sum_probs=57.5
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-CCCceeEEeechh-hhHhhhhC
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-HSGETAVVYKSSE-RKKLEMKG 249 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~KP~~~yK~~~-r~~l~~~g 249 (283)
..|..|++.+++++++++|++++++|+++ +..+...+++.|+ ++.++..++ .+.||++ |... ++.+ +
T Consensus 70 ~lp~~pga~e~L~~lk~~G~~v~LaTas~---~~~a~~i~~~lGl---Fd~Vigsd~~~~~kg~~--K~~~l~~~l---~ 138 (479)
T PRK08238 70 TLPYNEEVLDYLRAERAAGRKLVLATASD---ERLAQAVAAHLGL---FDGVFASDGTTNLKGAA--KAAALVEAF---G 138 (479)
T ss_pred hCCCChhHHHHHHHHHHCCCEEEEEeCCC---HHHHHHHHHHcCC---CCEEEeCCCccccCCch--HHHHHHHHh---C
Confidence 34678999999999999999999999999 4456667777787 233444433 3444433 3222 2222 2
Q ss_pred ceEeccCccchhhhccCc
Q 023352 250 YRIIGNIGDQWSDLLGTN 267 (283)
Q Consensus 250 y~iv~~IGDq~sDl~ga~ 267 (283)
.+-+.++||+.+|+....
T Consensus 139 ~~~~~yvGDS~~Dlp~~~ 156 (479)
T PRK08238 139 ERGFDYAGNSAADLPVWA 156 (479)
T ss_pred ccCeeEecCCHHHHHHHH
Confidence 232467899999999763
No 95
>PRK11590 hypothetical protein; Provisional
Probab=98.47 E-value=2.2e-07 Score=81.98 Aligned_cols=103 Identities=18% Similarity=0.121 Sum_probs=62.3
Q ss_pred CCCChhhHHHH-HHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC--CCCc--eeEEeechhhhHhhh
Q 023352 173 APPLPESLKLY-KKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS--HSGE--TAVVYKSSERKKLEM 247 (283)
Q Consensus 173 ~~~ipga~eLl-~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~--~~~K--P~~~yK~~~r~~l~~ 247 (283)
..++||+.+++ +.+++.|++++++||++ +..+...++..|+..-++++-+.-. ..++ ...-+..++...+++
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~---~~~~~~il~~l~~~~~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~ 170 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSP---QPLVEQVYFDTPWLPRVNLIASQMQRRYGGWVLTLRCLGHEKVAQLER 170 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCc---HHHHHHHHHHccccccCceEEEEEEEEEccEECCccCCChHHHHHHHH
Confidence 56799999999 57888999999999999 4566677777775221333322211 1222 112233444454543
Q ss_pred h---CceEeccCccchhhhccC-ccCCccccCCCC
Q 023352 248 K---GYRIIGNIGDQWSDLLGT-NAGNRTFKLPDP 278 (283)
Q Consensus 248 ~---gy~iv~~IGDq~sDl~ga-~ag~r~fkLPNp 278 (283)
. ........||+.+|+-=- .++.....=|+|
T Consensus 171 ~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~~ 205 (211)
T PRK11590 171 KIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPRG 205 (211)
T ss_pred HhCCCcceEEEecCCcccHHHHHhCCCCEEECccH
Confidence 1 345567899999998643 233333343544
No 96
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.45 E-value=1.1e-07 Score=89.28 Aligned_cols=114 Identities=14% Similarity=0.026 Sum_probs=76.3
Q ss_pred CceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHh
Q 023352 130 GKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEA 209 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~ 209 (283)
.++++|+|+|+||.... .|...- .--.-.++++++.++|+.|+++|++++++|+++ +..+..
T Consensus 2 ~~k~~v~DlDnTlw~gv-------~~e~g~--------~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~---~~~a~~ 63 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGV-------LGEDGI--------DNLNLSPLHKTLQEKIKTLKKQGFLLALASKND---EDDAKK 63 (320)
T ss_pred CeEEEEEcCCCCCCCCE-------EccCCc--------cccccCccHHHHHHHHHHHHhCCCEEEEEcCCC---HHHHHH
Confidence 46899999999998642 110000 000113468999999999999999999999998 456777
Q ss_pred hhhh----ccchhhhhhhhcccCCCCceeEEeechhhhHhhh--hCceEeccCccchhhhccCcc
Q 023352 210 NLKH----AGFDTWEKLILKGSSHSGETAVVYKSSERKKLEM--KGYRIIGNIGDQWSDLLGTNA 268 (283)
Q Consensus 210 ~L~~----~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~--~gy~iv~~IGDq~sDl~ga~a 268 (283)
.|++ .|+..++..+... .||.+. ..+..+++ .+..-+++|||+..|+.++.+
T Consensus 64 ~l~~~~~~~~~~~~f~~~~~~----~~pk~~---~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~ 121 (320)
T TIGR01686 64 VFERRKDFILQAEDFDARSIN----WGPKSE---SLRKIAKKLNLGTDSFLFIDDNPAERANVKI 121 (320)
T ss_pred HHHhCccccCcHHHeeEEEEe----cCchHH---HHHHHHHHhCCCcCcEEEECCCHHHHHHHHH
Confidence 8887 7777666554332 233332 12222222 245678999999999999853
No 97
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.44 E-value=2.6e-07 Score=85.73 Aligned_cols=73 Identities=19% Similarity=0.237 Sum_probs=58.8
Q ss_pred CCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCC-ChhhHHHHHHHHHcCeEEEEEeCCCccccccc
Q 023352 129 DGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPP-LPESLKLYKKLLLLGIKIVFLTGRPEDQRNVT 207 (283)
Q Consensus 129 ~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~-ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T 207 (283)
.-++.++||+||||+... ..... -|++.++|++|+++|++++++||++ +...
T Consensus 126 ~~~~~i~~D~D~TL~~~~------------------------~~v~irdp~V~EtL~eLkekGikLaIvTNg~---Re~v 178 (303)
T PHA03398 126 EIPHVIVFDLDSTLITDE------------------------EPVRIRDPFVYDSLDELKERGCVLVLWSYGN---REHV 178 (303)
T ss_pred eeccEEEEecCCCccCCC------------------------CccccCChhHHHHHHHHHHCCCEEEEEcCCC---hHHH
Confidence 346799999999999752 12223 3999999999999999999999987 5566
Q ss_pred HhhhhhccchhhhhhhhcccC
Q 023352 208 EANLKHAGFDTWEKLILKGSS 228 (283)
Q Consensus 208 ~~~L~~~G~~~~~~lilr~~~ 228 (283)
...|+..|+..+++.++.++.
T Consensus 179 ~~~Le~lgL~~yFDvII~~g~ 199 (303)
T PHA03398 179 VHSLKETKLEGYFDIIICGGR 199 (303)
T ss_pred HHHHHHcCCCccccEEEECCC
Confidence 889999999988876666544
No 98
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=98.40 E-value=3e-07 Score=84.57 Aligned_cols=61 Identities=20% Similarity=0.324 Sum_probs=52.8
Q ss_pred ceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhh
Q 023352 131 KNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEAN 210 (283)
Q Consensus 131 ~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~ 210 (283)
.++|+|||||||++. ..++||+.+++++|+++|++++++|||+...+......
T Consensus 2 ~~~~~~D~DGtl~~~---------------------------~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~ 54 (279)
T TIGR01452 2 AQGFIFDCDGVLWLG---------------------------ERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALK 54 (279)
T ss_pred ccEEEEeCCCceEcC---------------------------CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHH
Confidence 468999999999864 24789999999999999999999999987777777788
Q ss_pred hhhccchh
Q 023352 211 LKHAGFDT 218 (283)
Q Consensus 211 L~~~G~~~ 218 (283)
|+++|+..
T Consensus 55 l~~~G~~~ 62 (279)
T TIGR01452 55 FARLGFNG 62 (279)
T ss_pred HHHcCCCC
Confidence 99999864
No 99
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.40 E-value=1.9e-07 Score=78.77 Aligned_cols=108 Identities=28% Similarity=0.351 Sum_probs=70.5
Q ss_pred CceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHh
Q 023352 130 GKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEA 209 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~ 209 (283)
..+-+|||+||||.|..-||..++-.-+.||. .++ . -++.|.+.|++++++|||. ....++
T Consensus 7 ~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv-------~DG-------~--Gik~l~~~Gi~vAIITGr~---s~ive~ 67 (170)
T COG1778 7 NIKLLILDVDGVLTDGKLYYDENGEEIKAFNV-------RDG-------H--GIKLLLKSGIKVAIITGRD---SPIVEK 67 (170)
T ss_pred hceEEEEeccceeecCeEEEcCCCceeeeeec-------cCc-------H--HHHHHHHcCCeEEEEeCCC---CHHHHH
Confidence 35679999999999998888765433233432 111 1 2567889999999999999 456778
Q ss_pred hhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCceEeccCccchhhhcc
Q 023352 210 NLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLG 265 (283)
Q Consensus 210 ~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~g 265 (283)
..+.+|+.. ++....+ |- .-....++++. .++..+++|||.++|+-.
T Consensus 68 Ra~~LGI~~---~~qG~~d---K~--~a~~~L~~~~~-l~~e~~ayiGDD~~Dlpv 114 (170)
T COG1778 68 RAKDLGIKH---LYQGISD---KL--AAFEELLKKLN-LDPEEVAYVGDDLVDLPV 114 (170)
T ss_pred HHHHcCCce---eeechHh---HH--HHHHHHHHHhC-CCHHHhhhhcCccccHHH
Confidence 888889975 3333221 10 00112222221 356779999999999854
No 100
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=98.38 E-value=1.5e-07 Score=81.75 Aligned_cols=89 Identities=28% Similarity=0.423 Sum_probs=55.9
Q ss_pred CCCCCChhhHHHHHHHHHcCeEEEEEeCCCcc----cccccHhhhhhc-cchhhhhhhhcccCCCCceeEEeechhhhHh
Q 023352 171 GKAPPLPESLKLYKKLLLLGIKIVFLTGRPED----QRNVTEANLKHA-GFDTWEKLILKGSSHSGETAVVYKSSERKKL 245 (283)
Q Consensus 171 ~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~----~r~~T~~~L~~~-G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l 245 (283)
...+|+||+.+.+++|.++|+.+++||+|+.. ....|.+||+++ |...++.+++.+. | . .+
T Consensus 70 ~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~----K------~----~v 135 (191)
T PF06941_consen 70 SNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD----K------T----LV 135 (191)
T ss_dssp TT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS----G------G----GC
T ss_pred cCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC----C------C----eE
Confidence 35799999999999999999999999999865 456899999997 3222456665432 1 1 11
Q ss_pred hhhCceEeccCccchhhhccC-ccCCccccCCCC
Q 023352 246 EMKGYRIIGNIGDQWSDLLGT-NAGNRTFKLPDP 278 (283)
Q Consensus 246 ~~~gy~iv~~IGDq~sDl~ga-~ag~r~fkLPNp 278 (283)
+.. +.|+|++.-+... ..|..++.+..|
T Consensus 136 ---~~D--vlIDD~~~n~~~~~~~g~~~iLfd~p 164 (191)
T PF06941_consen 136 ---GGD--VLIDDRPHNLEQFANAGIPVILFDQP 164 (191)
T ss_dssp -----S--EEEESSSHHHSS-SSESSEEEEE--G
T ss_pred ---ecc--EEecCChHHHHhccCCCceEEEEcCC
Confidence 112 5688888666543 446666655443
No 101
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.32 E-value=4e-07 Score=81.02 Aligned_cols=89 Identities=21% Similarity=0.173 Sum_probs=59.8
Q ss_pred CCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhc-ccC-CCCc---e--eEEeechhhhHh
Q 023352 173 APPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILK-GSS-HSGE---T--AVVYKSSERKKL 245 (283)
Q Consensus 173 ~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr-~~~-~~~K---P--~~~yK~~~r~~l 245 (283)
.+..||+.++++.++++|++++++||.+. ..+....+..|+..+....+. .++ ..++ | ....|.....++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~---~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~ 152 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFT---FLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALREL 152 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChH---HHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHH
Confidence 78899999999999999999999999994 456666677888865332222 211 1222 1 112343333333
Q ss_pred h-hhCce--EeccCccchhhhc
Q 023352 246 E-MKGYR--IIGNIGDQWSDLL 264 (283)
Q Consensus 246 ~-~~gy~--iv~~IGDq~sDl~ 264 (283)
. +.|.+ .+..+||+.+|+-
T Consensus 153 ~~~~g~~~~~~~a~gDs~nDlp 174 (212)
T COG0560 153 AAELGIPLEETVAYGDSANDLP 174 (212)
T ss_pred HHHcCCCHHHeEEEcCchhhHH
Confidence 3 34655 6899999999985
No 102
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=98.30 E-value=8.7e-07 Score=80.02 Aligned_cols=131 Identities=20% Similarity=0.267 Sum_probs=84.5
Q ss_pred eEEEecccccccCC-ccccccCCCccc--------CCchhhhhhhhc-------------------CCCCCChhhHHHHH
Q 023352 133 IWVFDIDETSLSNL-PYYAKNGFGVKP--------YNPTLFNEWVNT-------------------GKAPPLPESLKLYK 184 (283)
Q Consensus 133 avVFDIDgTLldn~-~y~~~~~~g~~~--------~~~~~~~~~~~~-------------------~~~~~ipga~eLl~ 184 (283)
.+|||.|+|+++-. ..+.-..++... +....|.+++.. ...|..||++++++
T Consensus 2 LvvfDFD~TIvd~dsd~~v~~~l~~~~~~~~l~~~~~~~~wt~~m~~vl~~L~~~gvt~~~I~~~l~~ip~~pgm~~~l~ 81 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSDDWVIELLPPEELPEELRESYPKGGWTEYMDRVLQLLHEQGVTPEDIRDALRSIPIDPGMKELLR 81 (234)
T ss_pred EEEEeCCCCccCCccHHHHHHhcCCcccHHHHHHhccccchHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCccHHHHHH
Confidence 48999999999842 222222222211 222235444432 56899999999999
Q ss_pred HH--HHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC---CC-----------C---ceeEEeechhhhHh
Q 023352 185 KL--LLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS---HS-----------G---ETAVVYKSSERKKL 245 (283)
Q Consensus 185 ~L--~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~---~~-----------~---KP~~~yK~~~r~~l 245 (283)
.+ ++.|+.++|+|... .-....+|+++|+...++-|.+... .. . .|.-.-|.....++
T Consensus 82 ~l~~~~~~~~~~IiSDaN---s~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~NmCK~~il~~~ 158 (234)
T PF06888_consen 82 FLAKNQRGFDLIIISDAN---SFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPPNMCKGKILERL 158 (234)
T ss_pred HHHhcCCCceEEEEeCCc---HhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCCccchHHHHHHH
Confidence 99 46899999999988 4467889999999865433444321 11 1 12223454444444
Q ss_pred hhh----C--ceEeccCccchhhhccC
Q 023352 246 EMK----G--YRIIGNIGDQWSDLLGT 266 (283)
Q Consensus 246 ~~~----g--y~iv~~IGDq~sDl~ga 266 (283)
... | |+-+++|||..+|+=.+
T Consensus 159 ~~~~~~~g~~~~rviYiGDG~nD~Cp~ 185 (234)
T PF06888_consen 159 LQEQAQRGVPYDRVIYIGDGRNDFCPA 185 (234)
T ss_pred HHHHhhcCCCcceEEEECCCCCCcCcc
Confidence 443 3 77899999999999766
No 103
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.29 E-value=7.4e-07 Score=80.82 Aligned_cols=61 Identities=16% Similarity=0.218 Sum_probs=51.0
Q ss_pred eeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhh
Q 023352 132 NIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANL 211 (283)
Q Consensus 132 ~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L 211 (283)
+.++||+||||++. ..++|++.+++++|+++|++++|+||++...++...+.|
T Consensus 2 ~~~~~D~DGtl~~~---------------------------~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l 54 (249)
T TIGR01457 2 KGYLIDLDGTMYKG---------------------------KERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEML 54 (249)
T ss_pred CEEEEeCCCceEcC---------------------------CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 57999999999864 236789999999999999999999996655567778889
Q ss_pred hhccchhh
Q 023352 212 KHAGFDTW 219 (283)
Q Consensus 212 ~~~G~~~~ 219 (283)
++.|++..
T Consensus 55 ~~~g~~~~ 62 (249)
T TIGR01457 55 ASFDIPAT 62 (249)
T ss_pred HHcCCCCC
Confidence 99998753
No 104
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=98.25 E-value=4.6e-07 Score=81.10 Aligned_cols=99 Identities=15% Similarity=0.124 Sum_probs=65.0
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhc---cchhhhhhhhcccCCCCceeEEeechhhhHhhhh
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHA---GFDTWEKLILKGSSHSGETAVVYKSSERKKLEMK 248 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~---G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~ 248 (283)
..+++||+.++|++|+++|++++++||.+. ......++.. ++..++..++. .....||++........++. .
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~---~~~~~~~~~~~~~~L~~~f~~~fd-~~~g~KP~p~~y~~i~~~lg-v 167 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSV---PAQKLLFGHSDAGNLTPYFSGYFD-TTVGLKTEAQSYVKIAGQLG-S 167 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCH---HHHHHHHhhccccchhhhcceEEE-eCcccCCCHHHHHHHHHHhC-c
Confidence 357999999999999999999999999983 3344444443 44444333332 12235777743322222221 1
Q ss_pred CceEeccCccchhhhccC-ccCCccccC
Q 023352 249 GYRIIGNIGDQWSDLLGT-NAGNRTFKL 275 (283)
Q Consensus 249 gy~iv~~IGDq~sDl~ga-~ag~r~fkL 275 (283)
.-..+++|||+..|+.+| .+|++++.+
T Consensus 168 ~p~e~lfVgDs~~Di~AA~~AG~~ti~v 195 (220)
T TIGR01691 168 PPREILFLSDIINELDAARKAGLHTGQL 195 (220)
T ss_pred ChhHEEEEeCCHHHHHHHHHcCCEEEEE
Confidence 124589999999999999 678887655
No 105
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.19 E-value=2.4e-06 Score=75.44 Aligned_cols=58 Identities=22% Similarity=0.183 Sum_probs=43.1
Q ss_pred ceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhh
Q 023352 131 KNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEAN 210 (283)
Q Consensus 131 ~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~ 210 (283)
.+.++||+||||++.. ...-|.+.+.+++|+++|++++++|||+.. .....
T Consensus 3 ~kli~~DlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~G~~~~iaTGR~~~---~~~~~ 53 (230)
T PRK01158 3 IKAIAIDIDGTITDKD--------------------------RRLSLKAVEAIRKAEKLGIPVILATGNVLC---FARAA 53 (230)
T ss_pred eeEEEEecCCCcCCCC--------------------------CccCHHHHHHHHHHHHCCCEEEEEcCCchH---HHHHH
Confidence 3689999999999741 124467889999999999999999999943 23334
Q ss_pred hhhccch
Q 023352 211 LKHAGFD 217 (283)
Q Consensus 211 L~~~G~~ 217 (283)
++..|++
T Consensus 54 ~~~l~~~ 60 (230)
T PRK01158 54 AKLIGTS 60 (230)
T ss_pred HHHhCCC
Confidence 4445554
No 106
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.19 E-value=2.3e-06 Score=77.35 Aligned_cols=59 Identities=27% Similarity=0.366 Sum_probs=45.9
Q ss_pred ceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhh
Q 023352 131 KNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEAN 210 (283)
Q Consensus 131 ~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~ 210 (283)
.+.++|||||||+++. ....|...+.+++|+++|++++++|||+. ......
T Consensus 3 ~kli~~DlDGTLl~~~--------------------------~~i~~~~~~ai~~~~~~G~~~~iaTGR~~---~~~~~~ 53 (272)
T PRK10530 3 YRVIALDLDGTLLTPK--------------------------KTILPESLEALARAREAGYKVIIVTGRHH---VAIHPF 53 (272)
T ss_pred ccEEEEeCCCceECCC--------------------------CccCHHHHHHHHHHHHCCCEEEEEcCCCh---HHHHHH
Confidence 4689999999999751 23556788999999999999999999994 344556
Q ss_pred hhhccchh
Q 023352 211 LKHAGFDT 218 (283)
Q Consensus 211 L~~~G~~~ 218 (283)
+++.|+..
T Consensus 54 ~~~l~~~~ 61 (272)
T PRK10530 54 YQALALDT 61 (272)
T ss_pred HHhcCCCC
Confidence 66667653
No 107
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=98.17 E-value=3.3e-06 Score=72.57 Aligned_cols=118 Identities=21% Similarity=0.246 Sum_probs=72.9
Q ss_pred cCCCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeE--EEEEeCCCcccc
Q 023352 127 AGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIK--IVFLTGRPEDQR 204 (283)
Q Consensus 127 ~~~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~Gik--I~ivTgR~e~~r 204 (283)
...|.+++|||.|+||..- + ....-|...+.++++++.+.. |.++||......
T Consensus 37 k~~Gik~li~DkDNTL~~~-------------~------------~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~ 91 (168)
T PF09419_consen 37 KKKGIKALIFDKDNTLTPP-------------Y------------EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSD 91 (168)
T ss_pred hhcCceEEEEcCCCCCCCC-------------C------------cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCccc
Confidence 3467899999999999852 1 245667888899999999875 999999853221
Q ss_pred cc---cHhhh-hhccchhhhhhhhcccCCCCceeEEeechhhhHhhhh----CceEeccCccch-hhhccCc-cCCcccc
Q 023352 205 NV---TEANL-KHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMK----GYRIIGNIGDQW-SDLLGTN-AGNRTFK 274 (283)
Q Consensus 205 ~~---T~~~L-~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~----gy~iv~~IGDq~-sDl~ga~-ag~r~fk 274 (283)
+. -.+.+ +.+|++. ++- ...||.. .....+.+... ....+++||||. +|+.+|+ .|..++.
T Consensus 92 d~~~~~a~~~~~~lgIpv-----l~h--~~kKP~~--~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~til 162 (168)
T PF09419_consen 92 DPDGERAEALEKALGIPV-----LRH--RAKKPGC--FREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTIL 162 (168)
T ss_pred CccHHHHHHHHHhhCCcE-----EEe--CCCCCcc--HHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEE
Confidence 11 12222 3456653 111 1234521 11222222211 245689999999 9999994 5667766
Q ss_pred CCCC
Q 023352 275 LPDP 278 (283)
Q Consensus 275 LPNp 278 (283)
+-++
T Consensus 163 v~~g 166 (168)
T PF09419_consen 163 VTDG 166 (168)
T ss_pred EecC
Confidence 5544
No 108
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.17 E-value=2.7e-06 Score=77.41 Aligned_cols=59 Identities=24% Similarity=0.204 Sum_probs=46.8
Q ss_pred ceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhh
Q 023352 131 KNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEAN 210 (283)
Q Consensus 131 ~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~ 210 (283)
.+.++|||||||+++. ...-+..++.+++|+++|++++++|||+. ......
T Consensus 2 ~kli~~DlDGTLl~~~--------------------------~~i~~~~~~ai~~l~~~G~~~~iaTGR~~---~~~~~~ 52 (272)
T PRK15126 2 ARLAAFDMDGTLLMPD--------------------------HHLGEKTLSTLARLRERDITLTFATGRHV---LEMQHI 52 (272)
T ss_pred ccEEEEeCCCcCcCCC--------------------------CcCCHHHHHHHHHHHHCCCEEEEECCCCH---HHHHHH
Confidence 3689999999999751 23557788999999999999999999993 345566
Q ss_pred hhhccchh
Q 023352 211 LKHAGFDT 218 (283)
Q Consensus 211 L~~~G~~~ 218 (283)
+++.|+..
T Consensus 53 ~~~l~~~~ 60 (272)
T PRK15126 53 LGALSLDA 60 (272)
T ss_pred HHHcCCCC
Confidence 67777754
No 109
>PRK10976 putative hydrolase; Provisional
Probab=98.17 E-value=2.9e-06 Score=76.83 Aligned_cols=59 Identities=25% Similarity=0.198 Sum_probs=45.4
Q ss_pred ceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhh
Q 023352 131 KNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEAN 210 (283)
Q Consensus 131 ~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~ 210 (283)
.+.+++||||||+++. ...-+...+.+++|+++|++++++|||+. ......
T Consensus 2 ikli~~DlDGTLl~~~--------------------------~~is~~~~~ai~~l~~~G~~~~iaTGR~~---~~~~~~ 52 (266)
T PRK10976 2 YQVVASDLDGTLLSPD--------------------------HTLSPYAKETLKLLTARGIHFVFATGRHH---VDVGQI 52 (266)
T ss_pred ceEEEEeCCCCCcCCC--------------------------CcCCHHHHHHHHHHHHCCCEEEEEcCCCh---HHHHHH
Confidence 3689999999999751 13456788999999999999999999994 344555
Q ss_pred hhhccchh
Q 023352 211 LKHAGFDT 218 (283)
Q Consensus 211 L~~~G~~~ 218 (283)
++..|+..
T Consensus 53 ~~~l~~~~ 60 (266)
T PRK10976 53 RDNLEIKS 60 (266)
T ss_pred HHhcCCCC
Confidence 66666653
No 110
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.15 E-value=3e-06 Score=77.49 Aligned_cols=59 Identities=22% Similarity=0.193 Sum_probs=47.4
Q ss_pred ceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhh
Q 023352 131 KNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEAN 210 (283)
Q Consensus 131 ~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~ 210 (283)
.+.+++||||||+++. ....+++.+.+++|+++|++++++|||+ .......
T Consensus 4 ~kli~~DlDGTLl~~~--------------------------~~~~~~~~~ai~~l~~~Gi~~~iaTgR~---~~~~~~~ 54 (273)
T PRK00192 4 KLLVFTDLDGTLLDHH--------------------------TYSYEPAKPALKALKEKGIPVIPCTSKT---AAEVEVL 54 (273)
T ss_pred ceEEEEcCcccCcCCC--------------------------CcCcHHHHHHHHHHHHCCCEEEEEcCCC---HHHHHHH
Confidence 4689999999999741 1345789999999999999999999998 4455667
Q ss_pred hhhccchh
Q 023352 211 LKHAGFDT 218 (283)
Q Consensus 211 L~~~G~~~ 218 (283)
+++.|+..
T Consensus 55 ~~~l~l~~ 62 (273)
T PRK00192 55 RKELGLED 62 (273)
T ss_pred HHHcCCCC
Confidence 77777764
No 111
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.13 E-value=4.2e-06 Score=73.59 Aligned_cols=45 Identities=20% Similarity=0.194 Sum_probs=37.8
Q ss_pred eeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcc
Q 023352 132 NIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPED 202 (283)
Q Consensus 132 ~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~ 202 (283)
+.|++||||||+++. ...-|...+.+++|+++|++++++|||+..
T Consensus 2 k~v~~DlDGTLl~~~--------------------------~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~ 46 (215)
T TIGR01487 2 KLVAIDIDGTLTEPN--------------------------RMISERAIEAIRKAEKKGIPVSLVTGNTVP 46 (215)
T ss_pred cEEEEecCCCcCCCC--------------------------cccCHHHHHHHHHHHHCCCEEEEEcCCcch
Confidence 579999999999741 235578899999999999999999999853
No 112
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.12 E-value=4.3e-06 Score=75.78 Aligned_cols=58 Identities=22% Similarity=0.237 Sum_probs=45.3
Q ss_pred ceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhh
Q 023352 131 KNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEAN 210 (283)
Q Consensus 131 ~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~ 210 (283)
.+.+++||||||+++. ...-+...+.+++|+++|++++++|||+. ......
T Consensus 3 ~kli~~DlDGTLl~~~--------------------------~~i~~~~~~ai~~l~~~G~~~~iaTGR~~---~~~~~~ 53 (270)
T PRK10513 3 IKLIAIDMDGTLLLPD--------------------------HTISPAVKQAIAAARAKGVNVVLTTGRPY---AGVHRY 53 (270)
T ss_pred eEEEEEecCCcCcCCC--------------------------CccCHHHHHHHHHHHHCCCEEEEecCCCh---HHHHHH
Confidence 4789999999999751 13446788999999999999999999994 344556
Q ss_pred hhhccch
Q 023352 211 LKHAGFD 217 (283)
Q Consensus 211 L~~~G~~ 217 (283)
+++.|+.
T Consensus 54 ~~~l~~~ 60 (270)
T PRK10513 54 LKELHME 60 (270)
T ss_pred HHHhCCC
Confidence 6666764
No 113
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=98.11 E-value=3e-06 Score=73.66 Aligned_cols=123 Identities=19% Similarity=0.180 Sum_probs=77.1
Q ss_pred ceeEEEecccccccCCc-cccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccc-----
Q 023352 131 KNIWVFDIDETSLSNLP-YYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQR----- 204 (283)
Q Consensus 131 ~~avVFDIDgTLldn~~-y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r----- 204 (283)
.++++||-||||..--+ |. .++++ -...||+.+.+..|++.|++++++||-+---|
T Consensus 5 ~k~lflDRDGtin~d~~~yv------------~~~~~------~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~ 66 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYV------------DSLDD------FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTE 66 (181)
T ss_pred CcEEEEcCCCceecCCCccc------------CcHHH------hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccH
Confidence 68999999999986533 21 11222 35789999999999999999999999543111
Q ss_pred -------cccHhhhhhccchhhhhhhhccc---C--CCCceeEEeechhhhHhhhhC--ceEeccCccchhhhccC-ccC
Q 023352 205 -------NVTEANLKHAGFDTWEKLILKGS---S--HSGETAVVYKSSERKKLEMKG--YRIIGNIGDQWSDLLGT-NAG 269 (283)
Q Consensus 205 -------~~T~~~L~~~G~~~~~~lilr~~---~--~~~KP~~~yK~~~r~~l~~~g--y~iv~~IGDq~sDl~ga-~ag 269 (283)
+.....|+..|... +.++..+. + ..+||.+-.. ...+++.+ .....+|||..+|++++ ++|
T Consensus 67 ~~f~~~~~~m~~~l~~~gv~i-d~i~~Cph~p~~~c~cRKP~~gm~---~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~g 142 (181)
T COG0241 67 ADFDKLHNKMLKILASQGVKI-DGILYCPHHPEDNCDCRKPKPGML---LSALKEYNIDLSRSYVVGDRLTDLQAAENAG 142 (181)
T ss_pred HHHHHHHHHHHHHHHHcCCcc-ceEEECCCCCCCCCcccCCChHHH---HHHHHHhCCCccceEEecCcHHHHHHHHHCC
Confidence 11234455556432 33333332 1 3567665222 22222222 24578999999999998 667
Q ss_pred CccccC
Q 023352 270 NRTFKL 275 (283)
Q Consensus 270 ~r~fkL 275 (283)
++.+.+
T Consensus 143 i~~~~~ 148 (181)
T COG0241 143 IKGVLV 148 (181)
T ss_pred CCceEE
Confidence 665544
No 114
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.09 E-value=4.8e-06 Score=72.76 Aligned_cols=137 Identities=19% Similarity=0.271 Sum_probs=83.0
Q ss_pred CceeEEEecccccccCCcc--ccc-------------cCCC-cccCC-----------c--hhhhhhhhcCCCCCChhhH
Q 023352 130 GKNIWVFDIDETSLSNLPY--YAK-------------NGFG-VKPYN-----------P--TLFNEWVNTGKAPPLPESL 180 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y--~~~-------------~~~g-~~~~~-----------~--~~~~~~~~~~~~~~ipga~ 180 (283)
..++|+||+|-|++.-... .++ ..+| ..+|. + .....++...+...-||+.
T Consensus 15 ~~~aVcFDvDSTvi~eEgIdelA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl~llqp~~~qv~~~v~~~k~~lT~Gi~ 94 (227)
T KOG1615|consen 15 SADAVCFDVDSTVIQEEGIDELAAYCGVGEAVAEVTRRAMNGEADFQEALAARLSLLQPLQVQVEQFVIKQKPTLTPGIR 94 (227)
T ss_pred hcCeEEEecCcchhHHhhHHHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHHHHhcccHHHHHHHHhcCCCccCCCHH
Confidence 4679999999999974221 111 0111 11222 1 2344555556778899999
Q ss_pred HHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchh---hhhhhh-cccC-----CCCce--eEEeechhhhHhhh-h
Q 023352 181 KLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDT---WEKLIL-KGSS-----HSGET--AVVYKSSERKKLEM-K 248 (283)
Q Consensus 181 eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~---~~~lil-r~~~-----~~~KP--~~~yK~~~r~~l~~-~ 248 (283)
+|.+.|+++|.+++++||.- |....-.-.++|++. |...++ ..++ +...| +..-|+.....+.+ .
T Consensus 95 eLv~~L~~~~~~v~liSGGF---~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~lrk~~ 171 (227)
T KOG1615|consen 95 ELVSRLHARGTQVYLISGGF---RQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALLRKNY 171 (227)
T ss_pred HHHHHHHHcCCeEEEEcCCh---HHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHHHHhCC
Confidence 99999999999999999988 444444445567774 211111 1111 00112 12245555555554 2
Q ss_pred CceEeccCccchhhhccCccC
Q 023352 249 GYRIIGNIGDQWSDLLGTNAG 269 (283)
Q Consensus 249 gy~iv~~IGDq~sDl~ga~ag 269 (283)
.|..+.+|||.-+|+.+-+.+
T Consensus 172 ~~~~~~mvGDGatDlea~~pa 192 (227)
T KOG1615|consen 172 NYKTIVMVGDGATDLEAMPPA 192 (227)
T ss_pred ChheeEEecCCccccccCCch
Confidence 345689999999999987544
No 115
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.09 E-value=4.8e-06 Score=73.32 Aligned_cols=55 Identities=20% Similarity=0.195 Sum_probs=43.2
Q ss_pred EEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhh
Q 023352 134 WVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKH 213 (283)
Q Consensus 134 vVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~ 213 (283)
|++||||||+++. ....+...+.++.|+++|++++++|||+ ...+...++.
T Consensus 2 i~~DlDGTLL~~~--------------------------~~~~~~~~~~l~~l~~~gi~~~i~TgR~---~~~~~~~~~~ 52 (221)
T TIGR02463 2 VFSDLDGTLLDSH--------------------------SYDWQPAAPWLTRLQEAGIPVILCTSKT---AAEVEYLQKA 52 (221)
T ss_pred EEEeCCCCCcCCC--------------------------CCCcHHHHHHHHHHHHCCCeEEEEcCCC---HHHHHHHHHH
Confidence 7899999999751 1244558899999999999999999999 4455666666
Q ss_pred ccch
Q 023352 214 AGFD 217 (283)
Q Consensus 214 ~G~~ 217 (283)
.|+.
T Consensus 53 l~~~ 56 (221)
T TIGR02463 53 LGLT 56 (221)
T ss_pred cCCC
Confidence 6765
No 116
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.09 E-value=4e-06 Score=73.67 Aligned_cols=43 Identities=26% Similarity=0.255 Sum_probs=35.4
Q ss_pred EEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcc
Q 023352 134 WVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPED 202 (283)
Q Consensus 134 vVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~ 202 (283)
++|||||||+++. ...-+...+.+++|+++|++++++|||+..
T Consensus 1 i~~DlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~ 43 (225)
T TIGR01482 1 IASDIDGTLTDPN--------------------------RAINESALEAIRKAESVGIPVVLVTGNSVQ 43 (225)
T ss_pred CeEeccCccCCCC--------------------------cccCHHHHHHHHHHHHCCCEEEEEcCCchH
Confidence 5899999999752 124466788899999999999999999953
No 117
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.07 E-value=6.3e-06 Score=72.20 Aligned_cols=55 Identities=35% Similarity=0.422 Sum_probs=44.7
Q ss_pred EEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhh
Q 023352 134 WVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKH 213 (283)
Q Consensus 134 vVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~ 213 (283)
|++||||||++.. ...-|..++.++.|+++|++++++|||+ .......+..
T Consensus 1 i~~DlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~g~~~~i~TGR~---~~~~~~~~~~ 51 (254)
T PF08282_consen 1 IFSDLDGTLLNSD--------------------------GKISPETIEALKELQEKGIKLVIATGRS---YSSIKRLLKE 51 (254)
T ss_dssp EEEECCTTTCSTT--------------------------SSSCHHHHHHHHHHHHTTCEEEEECSST---HHHHHHHHHH
T ss_pred cEEEECCceecCC--------------------------CeeCHHHHHHHHhhcccceEEEEEccCc---cccccccccc
Confidence 6899999999741 2255899999999999999999999999 4456666677
Q ss_pred ccch
Q 023352 214 AGFD 217 (283)
Q Consensus 214 ~G~~ 217 (283)
.++.
T Consensus 52 ~~~~ 55 (254)
T PF08282_consen 52 LGID 55 (254)
T ss_dssp TTHC
T ss_pred ccch
Confidence 7766
No 118
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.07 E-value=6.3e-06 Score=74.65 Aligned_cols=59 Identities=31% Similarity=0.419 Sum_probs=47.3
Q ss_pred ceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhh
Q 023352 131 KNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEAN 210 (283)
Q Consensus 131 ~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~ 210 (283)
.+.++|||||||++.. ...-+.+++.+++++++|++++++|||+- ......
T Consensus 3 ~kli~~DlDGTLl~~~--------------------------~~i~~~~~~al~~~~~~g~~v~iaTGR~~---~~~~~~ 53 (264)
T COG0561 3 IKLLAFDLDGTLLDSN--------------------------KTISPETKEALARLREKGVKVVLATGRPL---PDVLSI 53 (264)
T ss_pred eeEEEEcCCCCccCCC--------------------------CccCHHHHHHHHHHHHCCCEEEEECCCCh---HHHHHH
Confidence 5789999999999852 23668889999999999999999999994 445566
Q ss_pred hhhccchh
Q 023352 211 LKHAGFDT 218 (283)
Q Consensus 211 L~~~G~~~ 218 (283)
++..|+..
T Consensus 54 ~~~l~~~~ 61 (264)
T COG0561 54 LEELGLDG 61 (264)
T ss_pred HHHcCCCc
Confidence 66666654
No 119
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.05 E-value=7.1e-06 Score=74.95 Aligned_cols=59 Identities=10% Similarity=0.103 Sum_probs=45.7
Q ss_pred CceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHh
Q 023352 130 GKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEA 209 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~ 209 (283)
.++.|++||||||++.. ....+...+.+++|+++|++++++|||+. .....
T Consensus 6 ~~~lI~~DlDGTLL~~~--------------------------~~i~~~~~~ai~~l~~~Gi~~viaTGR~~---~~i~~ 56 (271)
T PRK03669 6 DPLLIFTDLDGTLLDSH--------------------------TYDWQPAAPWLTRLREAQVPVILCSSKTA---AEMLP 56 (271)
T ss_pred CCeEEEEeCccCCcCCC--------------------------CcCcHHHHHHHHHHHHcCCeEEEEcCCCH---HHHHH
Confidence 46789999999999741 12346688999999999999999999994 34455
Q ss_pred hhhhccch
Q 023352 210 NLKHAGFD 217 (283)
Q Consensus 210 ~L~~~G~~ 217 (283)
.++..|+.
T Consensus 57 ~~~~l~~~ 64 (271)
T PRK03669 57 LQQTLGLQ 64 (271)
T ss_pred HHHHhCCC
Confidence 66666764
No 120
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.05 E-value=6.5e-06 Score=73.62 Aligned_cols=56 Identities=23% Similarity=0.260 Sum_probs=44.3
Q ss_pred eEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhh
Q 023352 133 IWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLK 212 (283)
Q Consensus 133 avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~ 212 (283)
.|+|||||||++.. ...+++.+.+++|+++|++++++|||+ +......++
T Consensus 1 li~~DlDGTLl~~~---------------------------~~~~~~~~ai~~l~~~G~~~vi~TgR~---~~~~~~~~~ 50 (225)
T TIGR02461 1 VIFTDLDGTLLPPG---------------------------YEPGPAREALEELKDLGFPIVFVSSKT---RAEQEYYRE 50 (225)
T ss_pred CEEEeCCCCCcCCC---------------------------CCchHHHHHHHHHHHCCCEEEEEeCCC---HHHHHHHHH
Confidence 37899999999731 134678999999999999999999999 444566677
Q ss_pred hccchh
Q 023352 213 HAGFDT 218 (283)
Q Consensus 213 ~~G~~~ 218 (283)
++|+..
T Consensus 51 ~lg~~~ 56 (225)
T TIGR02461 51 ELGVEP 56 (225)
T ss_pred HcCCCC
Confidence 778743
No 121
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.04 E-value=2.1e-06 Score=73.19 Aligned_cols=84 Identities=26% Similarity=0.354 Sum_probs=54.4
Q ss_pred hhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccCC------CCceeE-Ee--echhhhHh--
Q 023352 177 PESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSH------SGETAV-VY--KSSERKKL-- 245 (283)
Q Consensus 177 pga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~~------~~KP~~-~y--K~~~r~~l-- 245 (283)
|++.++++.+++.|++++++|+.+ +..+...++..|++.. .++...... .++..+ .- |....+++
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~---~~~i~~~~~~~~i~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~ 167 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSP---DEIIEPIAERLGIDDD-NVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYI 167 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEE---HHHHHHHHHHTTSSEG-GEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCc---HHHHHHHHHHcCCCce-EEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHH
Confidence 444499999999999999999998 5566777778898863 222222111 111111 12 54444444
Q ss_pred -h--hhCceEeccCccchhhhc
Q 023352 246 -E--MKGYRIIGNIGDQWSDLL 264 (283)
Q Consensus 246 -~--~~gy~iv~~IGDq~sDl~ 264 (283)
. ..+...+++|||+.+|+.
T Consensus 168 ~~~~~~~~~~~~~iGDs~~D~~ 189 (192)
T PF12710_consen 168 RDEEDIDPDRVIAIGDSINDLP 189 (192)
T ss_dssp HHHHTHTCCEEEEEESSGGGHH
T ss_pred HhhcCCCCCeEEEEECCHHHHH
Confidence 1 235677899999999985
No 122
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=98.02 E-value=5.7e-06 Score=74.35 Aligned_cols=58 Identities=26% Similarity=0.430 Sum_probs=50.1
Q ss_pred EEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhh
Q 023352 134 WVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKH 213 (283)
Q Consensus 134 vVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~ 213 (283)
++||+||||+++ ..++|++.+.++.++++|+++.|+||.....+....+.|.+
T Consensus 1 ~lfD~DGvL~~~---------------------------~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWLG---------------------------HKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCcC---------------------------CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence 589999999975 24688999999999999999999998887667788888988
Q ss_pred -ccchh
Q 023352 214 -AGFDT 218 (283)
Q Consensus 214 -~G~~~ 218 (283)
.|++.
T Consensus 54 ~~g~~~ 59 (236)
T TIGR01460 54 LLGVDV 59 (236)
T ss_pred hcCCCC
Confidence 78764
No 123
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=98.00 E-value=2.3e-05 Score=69.80 Aligned_cols=134 Identities=20% Similarity=0.302 Sum_probs=87.7
Q ss_pred CCceeEEEecccccccCC-ccccccCCCcc--------cCCchhhhhhhhc-------------------CCCCCChhhH
Q 023352 129 DGKNIWVFDIDETSLSNL-PYYAKNGFGVK--------PYNPTLFNEWVNT-------------------GKAPPLPESL 180 (283)
Q Consensus 129 ~~~~avVFDIDgTLldn~-~y~~~~~~g~~--------~~~~~~~~~~~~~-------------------~~~~~ipga~ 180 (283)
..+-.++||.|.|++|-. ..+.-...+.. .|....|++++.. ...|..||+.
T Consensus 11 ~~ril~~FDFD~TIid~dSD~wVv~~lp~~~l~~qL~~t~p~~~Wne~M~rv~k~Lheqgv~~~~ik~~~r~iP~~Pgmv 90 (256)
T KOG3120|consen 11 SPRILLVFDFDRTIIDQDSDNWVVDELPTTDLFNQLRDTYPKGFWNELMDRVFKELHEQGVRIAEIKQVLRSIPIVPGMV 90 (256)
T ss_pred CCcEEEEEecCceeecCCcchHHHHhcccchhHHHHHHhcccchHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCCCccHH
Confidence 356689999999999843 22222112211 1222347777654 4679999999
Q ss_pred HHHHHHHHcCe-EEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC---CCCc---------------eeEEeechh
Q 023352 181 KLYKKLLLLGI-KIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS---HSGE---------------TAVVYKSSE 241 (283)
Q Consensus 181 eLl~~L~~~Gi-kI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~---~~~K---------------P~~~yK~~~ 241 (283)
++++.+++.|. .++|||... .-..+.||+.+|+..-|.-|.+.+. .+|. |.-.-|-..
T Consensus 91 ~lik~~ak~g~~eliIVSDaN---sfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNmCKg~V 167 (256)
T KOG3120|consen 91 RLIKSAAKLGCFELIIVSDAN---SFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMCKGLV 167 (256)
T ss_pred HHHHHHHhCCCceEEEEecCc---hhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhhhhhHH
Confidence 99999999995 999999877 4467899999999987766666432 1221 222223222
Q ss_pred hhHhhh----h--CceEeccCccchhhhcc
Q 023352 242 RKKLEM----K--GYRIIGNIGDQWSDLLG 265 (283)
Q Consensus 242 r~~l~~----~--gy~iv~~IGDq~sDl~g 265 (283)
..++.. . .|+-++++||.-+|+--
T Consensus 168 l~~~~~s~~~~gv~yer~iYvGDG~nD~CP 197 (256)
T KOG3120|consen 168 LDELVASQLKDGVRYERLIYVGDGANDFCP 197 (256)
T ss_pred HHHHHHHHhhcCCceeeEEEEcCCCCCcCc
Confidence 333322 2 35578999999999854
No 124
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.00 E-value=9.3e-06 Score=73.19 Aligned_cols=56 Identities=34% Similarity=0.447 Sum_probs=43.7
Q ss_pred eEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhh
Q 023352 133 IWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLK 212 (283)
Q Consensus 133 avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~ 212 (283)
.++|||||||++.. ...-+...+.+++|+++|++++++|||+. ......++
T Consensus 1 li~~DlDGTLl~~~--------------------------~~i~~~~~~~i~~l~~~G~~~~iaTGR~~---~~~~~~~~ 51 (256)
T TIGR00099 1 LIFIDLDGTLLNDD--------------------------HTISPSTKEALAKLREKGIKVVLATGRPY---KEVKNILK 51 (256)
T ss_pred CEEEeCCCCCCCCC--------------------------CccCHHHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHH
Confidence 37899999999751 12446788999999999999999999993 34455666
Q ss_pred hccch
Q 023352 213 HAGFD 217 (283)
Q Consensus 213 ~~G~~ 217 (283)
+.|+.
T Consensus 52 ~~~~~ 56 (256)
T TIGR00099 52 ELGLD 56 (256)
T ss_pred HcCCC
Confidence 66765
No 125
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=97.98 E-value=9e-06 Score=73.50 Aligned_cols=56 Identities=21% Similarity=0.220 Sum_probs=44.5
Q ss_pred EEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhh
Q 023352 134 WVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKH 213 (283)
Q Consensus 134 vVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~ 213 (283)
+++||||||+++. ...++...+.++.|+++|++++++|||+ .......+++
T Consensus 2 i~~DlDGTll~~~--------------------------~~~~~~~~~~i~~l~~~g~~~~~~TgR~---~~~~~~~~~~ 52 (256)
T TIGR01486 2 IFTDLDGTLLDPH--------------------------GYDWGPAKEVLERLQELGIPVIPCTSKT---AAEVEYLRKE 52 (256)
T ss_pred EEEcCCCCCcCCC--------------------------CcCchHHHHHHHHHHHCCCeEEEEcCCC---HHHHHHHHHH
Confidence 7899999999752 1134568999999999999999999999 4455667778
Q ss_pred ccchh
Q 023352 214 AGFDT 218 (283)
Q Consensus 214 ~G~~~ 218 (283)
.|++.
T Consensus 53 ~~~~~ 57 (256)
T TIGR01486 53 LGLED 57 (256)
T ss_pred cCCCC
Confidence 88753
No 126
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.97 E-value=1.1e-05 Score=75.15 Aligned_cols=59 Identities=14% Similarity=0.073 Sum_probs=45.0
Q ss_pred ceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhh
Q 023352 131 KNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEAN 210 (283)
Q Consensus 131 ~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~ 210 (283)
++.|++||||||++... ...+.+.+.+++|+++|++|+++|||+ .......
T Consensus 1 ~KLIftDLDGTLLd~~~--------------------------~~~~~a~~aL~~Lk~~GI~vVlaTGRt---~~ev~~l 51 (302)
T PRK12702 1 MRLVLSSLDGSLLDLEF--------------------------NSYGAARQALAALERRSIPLVLYSLRT---RAQLEHL 51 (302)
T ss_pred CcEEEEeCCCCCcCCCC--------------------------cCCHHHHHHHHHHHHCCCEEEEEcCCC---HHHHHHH
Confidence 46789999999998521 133557889999999999999999999 4445555
Q ss_pred hhhccchh
Q 023352 211 LKHAGFDT 218 (283)
Q Consensus 211 L~~~G~~~ 218 (283)
++..|+..
T Consensus 52 ~~~Lgl~~ 59 (302)
T PRK12702 52 CRQLRLEH 59 (302)
T ss_pred HHHhCCCC
Confidence 56667653
No 127
>PTZ00174 phosphomannomutase; Provisional
Probab=97.97 E-value=1.3e-05 Score=72.46 Aligned_cols=46 Identities=30% Similarity=0.297 Sum_probs=38.6
Q ss_pred CceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 130 GKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
+.+.|+|||||||+++. ...-|...+.+++++++|++++++|||+.
T Consensus 4 ~~klia~DlDGTLL~~~--------------------------~~is~~~~~ai~~l~~~Gi~~viaTGR~~ 49 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPR--------------------------NPITQEMKDTLAKLKSKGFKIGVVGGSDY 49 (247)
T ss_pred CCeEEEEECcCCCcCCC--------------------------CCCCHHHHHHHHHHHHCCCEEEEEcCCCH
Confidence 36789999999999752 23446788999999999999999999984
No 128
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.94 E-value=1.4e-05 Score=70.81 Aligned_cols=103 Identities=17% Similarity=0.093 Sum_probs=58.8
Q ss_pred CCCChhhHHHHH-HHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC--CCCce--eEEeechhhhHhhh
Q 023352 173 APPLPESLKLYK-KLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS--HSGET--AVVYKSSERKKLEM 247 (283)
Q Consensus 173 ~~~ipga~eLl~-~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~--~~~KP--~~~yK~~~r~~l~~ 247 (283)
..++|++.++++ .++++|++++++||+++ ..+....+..|+-.-++++-+.-. +.++- ..-+.+++...+++
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~---~~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~ 169 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQ---PLVEAVYFDSNFIHRLNLIASQIERGNGGWVLPLRCLGHEKVAQLEQ 169 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcH---HHHHHHHHhccccccCcEEEEEeEEeCCceEcCccCCChHHHHHHHH
Confidence 367999999996 78889999999999984 344555555444222333322211 11221 11233344444432
Q ss_pred ---hCceEeccCccchhhhccC-ccCCccccCCCC
Q 023352 248 ---KGYRIIGNIGDQWSDLLGT-NAGNRTFKLPDP 278 (283)
Q Consensus 248 ---~gy~iv~~IGDq~sDl~ga-~ag~r~fkLPNp 278 (283)
..+..+...||+.+|+.=- .++.....=|+|
T Consensus 170 ~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp~~ 204 (210)
T TIGR01545 170 KIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSKRG 204 (210)
T ss_pred HhCCChhheEEecCCcccHHHHHhCCCcEEECcch
Confidence 2455667899999998642 233343433443
No 129
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=97.91 E-value=9.3e-06 Score=69.13 Aligned_cols=131 Identities=12% Similarity=-0.009 Sum_probs=70.5
Q ss_pred ceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhh
Q 023352 131 KNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEAN 210 (283)
Q Consensus 131 ~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~ 210 (283)
++.+|+|+||||+.+..--...... ..+... .+.-...-.....||+.+||+.|.+. ++|++.|+.++.+.+ ..
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~-~~~~~~-~~~~~~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~---~i 74 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDAD-FKVPVL-IDGKIIPVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYAD---PV 74 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCc-eEEEEE-ecCcEEEEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHH---HH
Confidence 4679999999999874211100000 000000 00000001235679999999999987 999999999955444 44
Q ss_pred hhhccchh-hh-hhhhcccCCCCceeEEeechhhhHhhhhCceEeccCccchhhhccCc-cCCc
Q 023352 211 LKHAGFDT-WE-KLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGTN-AGNR 271 (283)
Q Consensus 211 L~~~G~~~-~~-~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~ga~-ag~r 271 (283)
|+..+... ++ ..+.|......++. ..|...+ +. ...+-+++|||+..|+.+.. .|+.
T Consensus 75 l~~ldp~~~~f~~~l~r~~~~~~~~~-~~K~L~~--l~-~~~~~vIiVDD~~~~~~~~~~NgI~ 134 (162)
T TIGR02251 75 LDILDRGGKVISRRLYRESCVFTNGK-YVKDLSL--VG-KDLSKVIIIDNSPYSYSLQPDNAIP 134 (162)
T ss_pred HHHHCcCCCEEeEEEEccccEEeCCC-EEeEchh--cC-CChhhEEEEeCChhhhccCccCEee
Confidence 44444332 22 23334332222222 2232111 11 12345789999999999873 3433
No 130
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=97.90 E-value=4.2e-06 Score=71.21 Aligned_cols=109 Identities=19% Similarity=0.159 Sum_probs=58.4
Q ss_pred eeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccc-------
Q 023352 132 NIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQR------- 204 (283)
Q Consensus 132 ~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r------- 204 (283)
+...||+||||+-+.. ...|. ..+++|. -..|++.+.|++|.+.|++|+++||-..-.+
T Consensus 1 Kia~fD~DgTLi~~~s--------~~~f~-~~~~D~~-----~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~ 66 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS--------GKKFP-KDPDDWK-----FFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDL 66 (159)
T ss_dssp SEEEE-SCTTTEE-ST--------STTS--SSTCGGE-----EC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHH
T ss_pred CEEEEeCCCCccCCCC--------CCcCc-CCHHHhh-----hcchhHHHHHHHHHhcCCeEEEEeCccccccccccchH
Confidence 3578999999998642 11121 1122331 1234799999999999999999999643222
Q ss_pred ----cccHhhhhhccchhhhhhhhcc-cCCCCceeEEeechhhhHhhhh-------CceEeccCccch
Q 023352 205 ----NVTEANLKHAGFDTWEKLILKG-SSHSGETAVVYKSSERKKLEMK-------GYRIIGNIGDQW 260 (283)
Q Consensus 205 ----~~T~~~L~~~G~~~~~~lilr~-~~~~~KP~~~yK~~~r~~l~~~-------gy~iv~~IGDq~ 260 (283)
+.....|+..|++. .++... .+..+||.+ +....+.+. ...-.++|||..
T Consensus 67 ~~~~~ki~~il~~l~ip~--~~~~a~~~d~~RKP~~----GM~~~~~~~~~~~~~id~~~Sf~VGDaa 128 (159)
T PF08645_consen 67 ENFHEKIENILKELGIPI--QVYAAPHKDPCRKPNP----GMWEFALKDYNDGVEIDLANSFYVGDAA 128 (159)
T ss_dssp HHHHHHHHHHHHHCTS-E--EEEECGCSSTTSTTSS----HHHHHHCCCTSTT--S-CCC-EEEESSC
T ss_pred HHHHHHHHHHHHHcCCce--EEEecCCCCCCCCCch----hHHHHHHHhccccccccccceEEEeccC
Confidence 22334555566663 223332 235677755 222222210 123478999973
No 131
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=97.87 E-value=1.7e-05 Score=74.55 Aligned_cols=59 Identities=20% Similarity=0.289 Sum_probs=48.7
Q ss_pred eEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHc----CeEEEEEeCCCcccccccH
Q 023352 133 IWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLL----GIKIVFLTGRPEDQRNVTE 208 (283)
Q Consensus 133 avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~----GikI~ivTgR~e~~r~~T~ 208 (283)
+++||+||||.++ .+++|++.++++.|+++ |+++.|+||.....+....
T Consensus 2 ~~ifD~DGvL~~g---------------------------~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~ 54 (321)
T TIGR01456 2 GFAFDIDGVLFRG---------------------------KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARA 54 (321)
T ss_pred EEEEeCcCceECC---------------------------ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHH
Confidence 6899999999875 34699999999999998 9999999998865555555
Q ss_pred hhh-hhccchh
Q 023352 209 ANL-KHAGFDT 218 (283)
Q Consensus 209 ~~L-~~~G~~~ 218 (283)
+.| +++|+..
T Consensus 55 ~~l~~~lG~~~ 65 (321)
T TIGR01456 55 EEISSLLGVDV 65 (321)
T ss_pred HHHHHHcCCCC
Confidence 555 7888864
No 132
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=97.85 E-value=3.4e-05 Score=68.22 Aligned_cols=100 Identities=21% Similarity=0.285 Sum_probs=79.4
Q ss_pred CceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHh
Q 023352 130 GKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEA 209 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~ 209 (283)
+.+.+++||-|||... ..++||+.|.++.|+..+.+|-|+||-+.+.+....+
T Consensus 6 ~v~gvLlDlSGtLh~e---------------------------~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~ 58 (262)
T KOG3040|consen 6 AVKGVLLDLSGTLHIE---------------------------DAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHE 58 (262)
T ss_pred ccceEEEeccceEecc---------------------------cccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHH
Confidence 4568999999999753 3489999999999999999999999999888888889
Q ss_pred hhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCceEeccCccch-hhhccCc
Q 023352 210 NLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQW-SDLLGTN 267 (283)
Q Consensus 210 ~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~-sDl~ga~ 267 (283)
.|.+.||..-++-|.++. ...+.-+++.+++.-+.|.|.. .|+.|..
T Consensus 59 rL~rlgf~v~eeei~tsl-----------~aa~~~~~~~~lrP~l~v~d~a~~dF~gid 106 (262)
T KOG3040|consen 59 RLQRLGFDVSEEEIFTSL-----------PAARQYLEENQLRPYLIVDDDALEDFDGID 106 (262)
T ss_pred HHHHhCCCccHHHhcCcc-----------HHHHHHHHhcCCCceEEEcccchhhCCCcc
Confidence 999999987555455442 3446667777788777777766 7887763
No 133
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=97.80 E-value=6.6e-05 Score=63.69 Aligned_cols=130 Identities=16% Similarity=0.018 Sum_probs=68.8
Q ss_pred CCCceeEEEecccccccCCccccccC---CCcccCCc----h--hhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeC
Q 023352 128 GDGKNIWVFDIDETSLSNLPYYAKNG---FGVKPYNP----T--LFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTG 198 (283)
Q Consensus 128 ~~~~~avVFDIDgTLldn~~y~~~~~---~g~~~~~~----~--~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTg 198 (283)
..++..+|+|+|+||+.+..-..... ......+. . .|.--.........||+.++|+.|.+. +++++.|+
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~-yel~I~T~ 81 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKL-YEMHVYTM 81 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhh-cEEEEEeC
Confidence 36788999999999998754211000 00000000 0 000000012346789999999999855 99999999
Q ss_pred CCcccccccHhhhhhccchh-hh-hhhhcccCCCCceeEEeechhhhHhhhhCceEeccCccchhhhccC
Q 023352 199 RPEDQRNVTEANLKHAGFDT-WE-KLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGT 266 (283)
Q Consensus 199 R~e~~r~~T~~~L~~~G~~~-~~-~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~ga 266 (283)
+++.+ +...|+..+... ++ ..+++.++..+ ...|. ...+-....+-+++|+|+..=....
T Consensus 82 ~~~~y---A~~vl~~ldp~~~~F~~ri~~rd~~~~---~~~Kd--L~~i~~~d~~~vvivDd~~~~~~~~ 143 (156)
T TIGR02250 82 GTRAY---AQAIAKLIDPDGKYFGDRIISRDESGS---PHTKS--LLRLFPADESMVVIIDDREDVWPWH 143 (156)
T ss_pred CcHHH---HHHHHHHhCcCCCeeccEEEEeccCCC---Ccccc--HHHHcCCCcccEEEEeCCHHHhhcC
Confidence 99554 444555555442 33 33333222111 12232 1122222345578899987544443
No 134
>PLN02887 hydrolase family protein
Probab=97.77 E-value=3.8e-05 Score=77.79 Aligned_cols=58 Identities=24% Similarity=0.242 Sum_probs=44.5
Q ss_pred CceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHh
Q 023352 130 GKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEA 209 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~ 209 (283)
+.+.|+|||||||+++. ...-+..++.+++|+++|++++++|||+. .....
T Consensus 307 ~iKLIa~DLDGTLLn~d--------------------------~~Is~~t~eAI~kl~ekGi~~vIATGR~~---~~i~~ 357 (580)
T PLN02887 307 KFSYIFCDMDGTLLNSK--------------------------SQISETNAKALKEALSRGVKVVIATGKAR---PAVID 357 (580)
T ss_pred CccEEEEeCCCCCCCCC--------------------------CccCHHHHHHHHHHHHCCCeEEEEcCCCH---HHHHH
Confidence 45789999999999752 23456788999999999999999999994 33444
Q ss_pred hhhhccc
Q 023352 210 NLKHAGF 216 (283)
Q Consensus 210 ~L~~~G~ 216 (283)
.++..|+
T Consensus 358 ~l~~L~l 364 (580)
T PLN02887 358 ILKMVDL 364 (580)
T ss_pred HHHHhCc
Confidence 5555554
No 135
>PTZ00445 p36-lilke protein; Provisional
Probab=97.75 E-value=4.2e-05 Score=67.93 Aligned_cols=166 Identities=18% Similarity=0.101 Sum_probs=99.1
Q ss_pred hhhhhccccccccchhhhHhHHHHHHhhhhhccCCCceeEEEecccccccCCccccccCCCcccCCchhhhhhh---hcC
Q 023352 95 GYVGHYMLGQQYRMDSEVVANEAILYAQSLKLAGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWV---NTG 171 (283)
Q Consensus 95 ~~v~~y~~~~~Y~~D~~~v~~~a~~y~~~~~~~~~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~---~~~ 171 (283)
..+..|..+.++. ..---+.|..+.+.++- .|.++|++|+|.||+..- --| |.+.. ..-
T Consensus 11 ~~~~~~~~~~~~~--~~~~~~~~~~~v~~L~~--~GIk~Va~D~DnTlI~~H------sgG--------~~~~~~~~~~~ 72 (219)
T PTZ00445 11 DAFKEYIESGLFD--HLNPHESADKFVDLLNE--CGIKVIASDFDLTMITKH------SGG--------YIDPDNDDIRV 72 (219)
T ss_pred HHHHHHHHhcccc--cCCHHHHHHHHHHHHHH--cCCeEEEecchhhhhhhh------ccc--------ccCCCcchhhh
Confidence 4457777777763 44445666666666653 578999999999999721 011 11111 001
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCccc------------ccccHhhhhhccchh--------hhhhhhcccC---
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQ------------RNVTEANLKHAGFDT--------WEKLILKGSS--- 228 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~------------r~~T~~~L~~~G~~~--------~~~lilr~~~--- 228 (283)
-..+-|....+++.|++.|++|++||=.++.. .+....-|++.+... |-+.+-.+..
T Consensus 73 ~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~ 152 (219)
T PTZ00445 73 LTSVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRP 152 (219)
T ss_pred hccCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhh
Confidence 12467889999999999999999999988633 112233344222110 0111111111
Q ss_pred -CCCceeEEeechhhhHh-hhhC--ceEeccCccchhhhccC-ccCCccccCCCC
Q 023352 229 -HSGETAVVYKSSERKKL-EMKG--YRIIGNIGDQWSDLLGT-NAGNRTFKLPDP 278 (283)
Q Consensus 229 -~~~KP~~~yK~~~r~~l-~~~g--y~iv~~IGDq~sDl~ga-~ag~r~fkLPNp 278 (283)
.-.||++..|+--.+++ ++.| ...++.|+|...-+.++ ..|..++.++++
T Consensus 153 ~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 153 LGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred hcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence 23568887654311222 2222 34689999999999988 568888877765
No 136
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.74 E-value=3.3e-05 Score=71.45 Aligned_cols=105 Identities=19% Similarity=0.158 Sum_probs=69.3
Q ss_pred CchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhh------hcccC-CCCc
Q 023352 160 NPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLI------LKGSS-HSGE 232 (283)
Q Consensus 160 ~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~li------lr~~~-~~~K 232 (283)
+.+...+.+.....++.||+.+|++.|+++|++++++|+.. +......|+++|+...+..+ ...++ ..++
T Consensus 107 ~~e~i~~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~G~---~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~ 183 (277)
T TIGR01544 107 PKAKIKEIVAESDVMLKDGYENFFDKLQQHSIPVFIFSAGI---GNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGF 183 (277)
T ss_pred CHHHHHHHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeCCc---HHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCC
Confidence 33444455555678999999999999999999999999998 56777888888884322222 32322 2455
Q ss_pred eeEEe----echh-hhHh-hh----hCceEeccCccchhhhccCc
Q 023352 233 TAVVY----KSSE-RKKL-EM----KGYRIIGNIGDQWSDLLGTN 267 (283)
Q Consensus 233 P~~~y----K~~~-r~~l-~~----~gy~iv~~IGDq~sDl~ga~ 267 (283)
|.|.. |... +... .. ....-++++||+.+|+..+.
T Consensus 184 ~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~ 228 (277)
T TIGR01544 184 KGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMAD 228 (277)
T ss_pred CCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhc
Confidence 55522 3221 1111 11 23455889999999999874
No 137
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.72 E-value=5.5e-05 Score=65.64 Aligned_cols=43 Identities=33% Similarity=0.501 Sum_probs=36.3
Q ss_pred EEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 134 WVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 134 vVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
++||+||||+++. ..++-+.+.+.|++|+++|++++++|||+.
T Consensus 2 i~~D~DgTL~~~~-------------------------~~~~~~~~~~~l~~l~~~g~~~~i~TGR~~ 44 (204)
T TIGR01484 2 LFFDLDGTLLDPN-------------------------AHELSPETIEALERLREAGVKVVLVTGRSL 44 (204)
T ss_pred EEEeCcCCCcCCC-------------------------CCcCCHHHHHHHHHHHHCCCEEEEECCCCH
Confidence 7899999999741 123558899999999999999999999994
No 138
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=97.67 E-value=0.00017 Score=66.89 Aligned_cols=97 Identities=25% Similarity=0.402 Sum_probs=70.9
Q ss_pred CCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccH
Q 023352 129 DGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTE 208 (283)
Q Consensus 129 ~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~ 208 (283)
++-+.++||-||+|.. ...++||+.+.++.|+++|.+++|+||.+.+.|+...
T Consensus 20 ~~~DtfifDcDGVlW~---------------------------g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~ 72 (306)
T KOG2882|consen 20 DSFDTFIFDCDGVLWL---------------------------GEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYM 72 (306)
T ss_pred hhcCEEEEcCCcceee---------------------------cCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHH
Confidence 5678999999997642 2569999999999999999999999999998888888
Q ss_pred hhhhhccchh-hhhhhh----------cccCCCCceeEEe-echhhhHhhhhCceE
Q 023352 209 ANLKHAGFDT-WEKLIL----------KGSSHSGETAVVY-KSSERKKLEMKGYRI 252 (283)
Q Consensus 209 ~~L~~~G~~~-~~~lil----------r~~~~~~KP~~~y-K~~~r~~l~~~gy~i 252 (283)
+.++++||.. -.+-|+ +......|-.... -+..+.+|++.|++-
T Consensus 73 kK~~~lG~~~v~e~~i~ssa~~~a~ylk~~~~~~k~Vyvig~~gi~~eL~~aG~~~ 128 (306)
T KOG2882|consen 73 KKFAKLGFNSVKEENIFSSAYAIADYLKKRKPFGKKVYVIGEEGIREELDEAGFEY 128 (306)
T ss_pred HHHHHhCccccCcccccChHHHHHHHHHHhCcCCCeEEEecchhhhHHHHHcCcee
Confidence 8899999983 122222 2211111212222 377888999888764
No 139
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=97.62 E-value=8.1e-06 Score=70.46 Aligned_cols=88 Identities=22% Similarity=0.264 Sum_probs=59.0
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCce
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYR 251 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~ 251 (283)
..++.|++.++++.|+++|+++.++||.+ ...+....+..|+.. ..+..... +||.+.......+.++..+ .
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~---~~~a~~~~~~lgi~~--~~v~a~~~--~kP~~k~~~~~i~~l~~~~-~ 196 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDN---ESTASAIAKQLGIFD--SIVFARVI--GKPEPKIFLRIIKELQVKP-G 196 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSE---HHHHHHHHHHTTSCS--EEEEESHE--TTTHHHHHHHHHHHHTCTG-G
T ss_pred cCcchhhhhhhhhhhhccCcceeeeeccc---ccccccccccccccc--cccccccc--ccccchhHHHHHHHHhcCC-C
Confidence 35789999999999999999999999987 445666777788843 11111110 4554421133334444222 3
Q ss_pred EeccCccchhhhccCc
Q 023352 252 IIGNIGDQWSDLLGTN 267 (283)
Q Consensus 252 iv~~IGDq~sDl~ga~ 267 (283)
.+++|||..+|+.+..
T Consensus 197 ~v~~vGDg~nD~~al~ 212 (215)
T PF00702_consen 197 EVAMVGDGVNDAPALK 212 (215)
T ss_dssp GEEEEESSGGHHHHHH
T ss_pred EEEEEccCHHHHHHHH
Confidence 7899999999998763
No 140
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=97.60 E-value=2.7e-05 Score=70.03 Aligned_cols=95 Identities=20% Similarity=0.213 Sum_probs=63.3
Q ss_pred CChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhh--hcccC-CCCceeEEeechhhhHhhhhCce
Q 023352 175 PLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLI--LKGSS-HSGETAVVYKSSERKKLEMKGYR 251 (283)
Q Consensus 175 ~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~li--lr~~~-~~~KP~~~yK~~~r~~l~~~gy~ 251 (283)
-++++.++++.|+++|+++ ++||++.... ...+...|...++..+ ...+. ..+||++.......+++.....+
T Consensus 139 ~~~~~~~~l~~l~~~g~~~-i~tN~d~~~~---~~~~~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~ 214 (242)
T TIGR01459 139 DLDEFDELFAPIVARKIPN-ICANPDRGIN---QHGIYRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKN 214 (242)
T ss_pred CHHHHHHHHHHHHhCCCcE-EEECCCEecc---CCCceEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcc
Confidence 4789999999999999997 8899985433 3445666666555544 33322 47888885443333343211123
Q ss_pred EeccCccc-hhhhccC-ccCCccc
Q 023352 252 IIGNIGDQ-WSDLLGT-NAGNRTF 273 (283)
Q Consensus 252 iv~~IGDq-~sDl~ga-~ag~r~f 273 (283)
.+++|||+ .+|+.++ ++|.+++
T Consensus 215 ~~~~vGD~~~~Di~~a~~~G~~~i 238 (242)
T TIGR01459 215 RMLMVGDSFYTDILGANRLGIDTA 238 (242)
T ss_pred cEEEECCCcHHHHHHHHHCCCeEE
Confidence 58999999 5999998 5577654
No 141
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=97.59 E-value=6.9e-05 Score=71.32 Aligned_cols=100 Identities=23% Similarity=0.304 Sum_probs=67.8
Q ss_pred CCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhc-c-------chhhhhhhhcccCC-----CC--------
Q 023352 173 APPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHA-G-------FDTWEKLILKGSSH-----SG-------- 231 (283)
Q Consensus 173 ~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~-G-------~~~~~~lilr~~~~-----~~-------- 231 (283)
....||+.++|+.|+++|++++++||++ +..|...|+.+ | +..+++.++.+... .+
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTNS~---~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~ 259 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTNSD---YDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDV 259 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeCCC---HHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeC
Confidence 4568999999999999999999999998 56677777775 5 66677666543210 00
Q ss_pred -------------ceeEEeechhhhHhhh---hCceEeccCccch-hhhccCc--cCCccccC
Q 023352 232 -------------ETAVVYKSSERKKLEM---KGYRIIGNIGDQW-SDLLGTN--AGNRTFKL 275 (283)
Q Consensus 232 -------------KP~~~yK~~~r~~l~~---~gy~iv~~IGDq~-sDl~ga~--ag~r~fkL 275 (283)
++...|..+-...+.+ ..-..+++|||+. +|+.++. +|.|++.+
T Consensus 260 ~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI 322 (343)
T TIGR02244 260 ETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAI 322 (343)
T ss_pred CCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEE
Confidence 1112343222222222 1224689999999 9999985 78888744
No 142
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.54 E-value=0.00014 Score=74.56 Aligned_cols=61 Identities=21% Similarity=0.236 Sum_probs=45.4
Q ss_pred CCCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCccccccc
Q 023352 128 GDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVT 207 (283)
Q Consensus 128 ~~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T 207 (283)
+-.++.|++||||||+++.. ...+.+.+.++.|+++|++++++|||+.. ..
T Consensus 413 ~~~~KLIfsDLDGTLLd~d~--------------------------~i~~~t~eAL~~L~ekGI~~VIATGRs~~---~i 463 (694)
T PRK14502 413 GQFKKIVYTDLDGTLLNPLT--------------------------YSYSTALDALRLLKDKELPLVFCSAKTMG---EQ 463 (694)
T ss_pred CceeeEEEEECcCCCcCCCC--------------------------ccCHHHHHHHHHHHHcCCeEEEEeCCCHH---HH
Confidence 34678899999999998521 12345788899999999999999999943 34
Q ss_pred Hhhhhhccch
Q 023352 208 EANLKHAGFD 217 (283)
Q Consensus 208 ~~~L~~~G~~ 217 (283)
...++..|+.
T Consensus 464 ~~l~~~Lgl~ 473 (694)
T PRK14502 464 DLYRNELGIK 473 (694)
T ss_pred HHHHHHcCCC
Confidence 4455556654
No 143
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.53 E-value=0.00017 Score=66.10 Aligned_cols=50 Identities=20% Similarity=0.278 Sum_probs=39.2
Q ss_pred ceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHH-cCeEEEEEeCCCc
Q 023352 131 KNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLL-LGIKIVFLTGRPE 201 (283)
Q Consensus 131 ~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~-~GikI~ivTgR~e 201 (283)
...++||+||||++..+ . ......-+.+.+.|+.|++ .|++++++|||+.
T Consensus 14 ~~li~~D~DGTLl~~~~---------~------------p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~ 64 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKP---------H------------PDQVVVPDNILQGLQLLATANDGALALISGRSM 64 (266)
T ss_pred CEEEEEecCCCCCCCCC---------C------------cccccCCHHHHHHHHHHHhCCCCcEEEEeCCCH
Confidence 56899999999997421 0 0123566899999999998 7999999999994
No 144
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=97.49 E-value=0.00015 Score=66.31 Aligned_cols=89 Identities=26% Similarity=0.393 Sum_probs=62.4
Q ss_pred CceeEEEecccccccCCccccccC-----C------CcccCC--chhhhhhh----hcCCC-CCChhhHHHHHHHHHcCe
Q 023352 130 GKNIWVFDIDETSLSNLPYYAKNG-----F------GVKPYN--PTLFNEWV----NTGKA-PPLPESLKLYKKLLLLGI 191 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y~~~~~-----~------g~~~~~--~~~~~~~~----~~~~~-~~ipga~eLl~~L~~~Gi 191 (283)
..--||||||+||+-...+..... + +..... ...+.+|+ ..... ..=+.+.++++.|+++|+
T Consensus 19 ~~tLvvfDiDdTLi~~~~~lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~lie~~~~~~i~~lq~~~~ 98 (252)
T PF11019_consen 19 QDTLVVFDIDDTLITPKQPLGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELIESDVPNIINSLQNKGI 98 (252)
T ss_pred CCeEEEEEcchhhhcCccccCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEcchhHHHHHHHHHHCCC
Confidence 455789999999996542221110 1 000011 13355665 33333 334788899999999999
Q ss_pred EEEEEeCCCcccccccHhhhhhccchh
Q 023352 192 KIVFLTGRPEDQRNVTEANLKHAGFDT 218 (283)
Q Consensus 192 kI~ivTgR~e~~r~~T~~~L~~~G~~~ 218 (283)
+++-+|.|+...+..|.+.|++.|+..
T Consensus 99 ~v~alT~~~~~~~~~t~~~Lk~~gi~f 125 (252)
T PF11019_consen 99 PVIALTARGPNMEDWTLRELKSLGIDF 125 (252)
T ss_pred cEEEEcCCChhhHHHHHHHHHHCCCCc
Confidence 999999999999999999999999975
No 145
>PLN02423 phosphomannomutase
Probab=97.46 E-value=0.00018 Score=65.13 Aligned_cols=45 Identities=22% Similarity=0.341 Sum_probs=35.5
Q ss_pred CCceeEE-EecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCC
Q 023352 129 DGKNIWV-FDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRP 200 (283)
Q Consensus 129 ~~~~avV-FDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~ 200 (283)
.++++++ |||||||+++. ...-|...+.+++|+++ +.++++|||.
T Consensus 4 ~~~~~i~~~D~DGTLl~~~--------------------------~~i~~~~~~ai~~l~~~-i~fviaTGR~ 49 (245)
T PLN02423 4 RKPGVIALFDVDGTLTAPR--------------------------KEATPEMLEFMKELRKV-VTVGVVGGSD 49 (245)
T ss_pred CccceEEEEeccCCCcCCC--------------------------CcCCHHHHHHHHHHHhC-CEEEEECCcC
Confidence 3566666 99999999752 12347788999999976 9999999996
No 146
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=97.44 E-value=0.00023 Score=66.67 Aligned_cols=125 Identities=18% Similarity=0.084 Sum_probs=82.4
Q ss_pred ceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcC-CCCCChhhHHHHHHHHHcC-eEEEEEeCCCcccccccH
Q 023352 131 KNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTG-KAPPLPESLKLYKKLLLLG-IKIVFLTGRPEDQRNVTE 208 (283)
Q Consensus 131 ~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~-~~~~ipga~eLl~~L~~~G-ikI~ivTgR~e~~r~~T~ 208 (283)
.-.+|=|||+|+..+.-- .---..|+.|.... ..+++||+..+|+.|.+.| .+++++||.+...-....
T Consensus 161 ~igiISDiDDTV~~T~V~---------~~~r~~~~s~~l~~~tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~ 231 (373)
T COG4850 161 GIGIISDIDDTVKVTGVT---------EGPRKAGRSLLLHALTRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQ 231 (373)
T ss_pred ceeeeeccccceEecccc---------cchHHHHHHhhhcccccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHH
Confidence 346899999999986310 00013466666554 4689999999999999999 999999999977666666
Q ss_pred hhhhhccchhhhhhhhcccCC----CCceeEEee-chhhhHhhhhCceEeccCccch-hhhcc
Q 023352 209 ANLKHAGFDTWEKLILKGSSH----SGETAVVYK-SSERKKLEMKGYRIIGNIGDQW-SDLLG 265 (283)
Q Consensus 209 ~~L~~~G~~~~~~lilr~~~~----~~KP~~~yK-~~~r~~l~~~gy~iv~~IGDq~-sDl~g 265 (283)
+.|...+||. -.++++..+. -..+...-| ..++.-+.+.+-..++.|||+= .|.+-
T Consensus 232 efi~~~~~P~-GPl~L~~~g~~~~~i~~sga~rK~~~l~nil~~~p~~kfvLVGDsGE~DpeI 293 (373)
T COG4850 232 EFITNRNFPY-GPLLLRRWGGVLDNIIESGAARKGQSLRNILRRYPDRKFVLVGDSGEHDPEI 293 (373)
T ss_pred HHHhcCCCCC-CchhHhhcCCcccccccchhhhcccHHHHHHHhCCCceEEEecCCCCcCHHH
Confidence 7777778885 5566664320 011111222 4455566654445567788875 67653
No 147
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=97.36 E-value=0.00014 Score=73.00 Aligned_cols=82 Identities=29% Similarity=0.342 Sum_probs=62.2
Q ss_pred CCCCChhhHHHHHHHHHcCe-EEEEEeCCCcccccccHhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCc
Q 023352 172 KAPPLPESLKLYKKLLLLGI-KIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGY 250 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~Gi-kI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy 250 (283)
..++.||+.+++++|+++|+ +++++||++ +..+...+++.|+..++.-+. + .-|....+++...+
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~---~~~a~~i~~~lgi~~~f~~~~-p---------~~K~~~i~~l~~~~- 425 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDR---RAVAERVARELGIDEVHAELL-P---------EDKLEIVKELREKY- 425 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCC---HHHHHHHHHHcCChhhhhccC-c---------HHHHHHHHHHHhcC-
Confidence 56899999999999999999 999999998 567788889999976543221 1 11334445555444
Q ss_pred eEeccCccchhhhccCc
Q 023352 251 RIIGNIGDQWSDLLGTN 267 (283)
Q Consensus 251 ~iv~~IGDq~sDl~ga~ 267 (283)
+.+++|||..+|+.+..
T Consensus 426 ~~v~~vGDg~nD~~al~ 442 (536)
T TIGR01512 426 GPVAMVGDGINDAPALA 442 (536)
T ss_pred CEEEEEeCCHHHHHHHH
Confidence 57899999999998763
No 148
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.29 E-value=0.00022 Score=64.24 Aligned_cols=47 Identities=23% Similarity=0.227 Sum_probs=36.9
Q ss_pred eeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 132 NIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 132 ~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
..|+.|+||||++... +..+..|...+++++++++|+.++++|||+.
T Consensus 2 ~li~tDlDGTLl~~~~-----------------------~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~ 48 (249)
T TIGR01485 2 LLLVSDLDNTLVDHTD-----------------------GDNQALLRLNALLEDHRGEDSLLVYSTGRSP 48 (249)
T ss_pred eEEEEcCCCcCcCCCC-----------------------CChHHHHHHHHHHHHhhccCceEEEEcCCCH
Confidence 3688899999997310 0234558889999999999999999999983
No 149
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=97.28 E-value=0.00036 Score=70.41 Aligned_cols=118 Identities=25% Similarity=0.274 Sum_probs=78.1
Q ss_pred eeEEEecccccccCCccccccCCCcccCCchhhhhhh-hcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhh
Q 023352 132 NIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWV-NTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEAN 210 (283)
Q Consensus 132 ~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~-~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~ 210 (283)
+.||=|||||+.-+.- .| ..+ .-++.=.--|+.+||...++.||++.|+|+|.-.+...|...
T Consensus 531 kIVISDIDGTITKSDv------LG----------h~lp~iGkDWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~y 594 (738)
T KOG2116|consen 531 KIVISDIDGTITKSDV------LG----------HVLPMIGKDWTHTGVAKLYTKIKENGYKILYLSARAIGQADSTRQY 594 (738)
T ss_pred cEEEecCCCceEhhhh------hh----------hhhhhhcCcchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHH
Confidence 4678899999986521 11 000 012222457899999999999999999999998888888765
Q ss_pred hhh---ccchhh-hhhhhcccCC---------CCceeEEeechhhhHhhhh---Cc-eEeccCccchhhhccC
Q 023352 211 LKH---AGFDTW-EKLILKGSSH---------SGETAVVYKSSERKKLEMK---GY-RIIGNIGDQWSDLLGT 266 (283)
Q Consensus 211 L~~---~G~~~~-~~lilr~~~~---------~~KP~~~yK~~~r~~l~~~---gy-~iv~~IGDq~sDl~ga 266 (283)
|+. -|..-. -.++++++.. .+||. +||.+++..|+.. .+ ..-+-+|.+.+|...-
T Consensus 595 L~nv~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe-~FKIAcL~DIk~LF~p~~nPFYAgFGNR~TDviSY 666 (738)
T KOG2116|consen 595 LKNVEQDGKKLPDGPVILSPDSLFAALHREVIERKPE-VFKIACLTDIKNLFPPSGNPFYAGFGNRITDVISY 666 (738)
T ss_pred HHHHhhcCccCCCCCEEeCCCcchHHHHHHHHHcCch-hhhHHHHHHHHHhcCCCCCceeeecCCCcccceee
Confidence 554 454321 3566666542 24443 4887777777642 22 2467899999998765
No 150
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=97.22 E-value=0.00022 Score=71.90 Aligned_cols=82 Identities=28% Similarity=0.347 Sum_probs=61.1
Q ss_pred CCCCChhhHHHHHHHHHcC-eEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCc
Q 023352 172 KAPPLPESLKLYKKLLLLG-IKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGY 250 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~G-ikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy 250 (283)
+.++.||+.+++++|+++| ++++++||.+ +..+...+++.|+..++.-+. + .. |....+++...+.
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~---~~~a~~i~~~lgi~~~f~~~~-p---~~------K~~~v~~l~~~~~ 448 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDN---RSAAEAVAAELGIDEVHAELL-P---ED------KLAIVKELQEEGG 448 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCC---HHHHHHHHHHhCCCeeeccCC-H---HH------HHHHHHHHHHcCC
Confidence 5789999999999999999 9999999998 556778888899976443221 1 11 2333444544443
Q ss_pred eEeccCccchhhhccCc
Q 023352 251 RIIGNIGDQWSDLLGTN 267 (283)
Q Consensus 251 ~iv~~IGDq~sDl~ga~ 267 (283)
.+++|||..+|+.+..
T Consensus 449 -~v~~vGDg~nD~~al~ 464 (556)
T TIGR01525 449 -VVAMVGDGINDAPALA 464 (556)
T ss_pred -EEEEEECChhHHHHHh
Confidence 6899999999998873
No 151
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=97.18 E-value=0.00023 Score=63.39 Aligned_cols=110 Identities=14% Similarity=0.050 Sum_probs=70.8
Q ss_pred CCchhhhhhhhc----CCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccCC-----
Q 023352 159 YNPTLFNEWVNT----GKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSH----- 229 (283)
Q Consensus 159 ~~~~~~~~~~~~----~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~~----- 229 (283)
++...+++++.+ ...+|=+-.+++|-.|++++ ..+.||.+ +....+.|+++|+.+-|+-|+.-+..
T Consensus 81 ~d~deY~~~V~~~LPlq~LkPD~~LRnlLL~l~~r~--k~~FTNa~---k~HA~r~Lk~LGieDcFegii~~e~~np~~~ 155 (244)
T KOG3109|consen 81 FDADEYHRFVHGRLPLQDLKPDPVLRNLLLSLKKRR--KWIFTNAY---KVHAIRILKKLGIEDCFEGIICFETLNPIEK 155 (244)
T ss_pred CCHHHHHHHhhccCcHhhcCCCHHHHHHHHhCcccc--EEEecCCc---HHHHHHHHHHhChHHhccceeEeeccCCCCC
Confidence 444566666655 34677788889999998887 67779988 77889999999998855444332221
Q ss_pred --CCceeEEeechhhhHhhhhCceEeccCccchhhhccC-ccCCccc
Q 023352 230 --SGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGT-NAGNRTF 273 (283)
Q Consensus 230 --~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~ga-~ag~r~f 273 (283)
--||.+...+...+...-..++-+.+++|+.+-|++| ..|.+++
T Consensus 156 ~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tv 202 (244)
T KOG3109|consen 156 TVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTV 202 (244)
T ss_pred ceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeE
Confidence 1245553222222211112255689999999999988 4566553
No 152
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=97.14 E-value=0.00064 Score=59.17 Aligned_cols=102 Identities=14% Similarity=0.033 Sum_probs=58.3
Q ss_pred CCCCCChhhHHHHHHHHHcCeEEEEEeCCCccccccc-Hhhhhhccchh---h-hhhhhcccCCC---CceeEEe---ec
Q 023352 171 GKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVT-EANLKHAGFDT---W-EKLILKGSSHS---GETAVVY---KS 239 (283)
Q Consensus 171 ~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T-~~~L~~~G~~~---~-~~lilr~~~~~---~KP~~~y---K~ 239 (283)
.....-||.+++++..++++++++++|+.-+..-... +..+.+..+.. + ....+..++.+ .+.+..| |+
T Consensus 70 k~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~ 149 (220)
T COG4359 70 KDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKS 149 (220)
T ss_pred hhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcc
Confidence 3467789999999999999999999999875432221 21221111221 1 11111111110 0001112 44
Q ss_pred hhhhHhhhhCceEeccCccchhhhccCccCCccc
Q 023352 240 SERKKLEMKGYRIIGNIGDQWSDLLGTNAGNRTF 273 (283)
Q Consensus 240 ~~r~~l~~~gy~iv~~IGDq~sDl~ga~ag~r~f 273 (283)
....++. +.++-++++||+.+|+.++......|
T Consensus 150 ~vI~~l~-e~~e~~fy~GDsvsDlsaaklsDllF 182 (220)
T COG4359 150 SVIHELS-EPNESIFYCGDSVSDLSAAKLSDLLF 182 (220)
T ss_pred hhHHHhh-cCCceEEEecCCcccccHhhhhhhHh
Confidence 4455554 35666899999999999986544433
No 153
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=97.12 E-value=0.00048 Score=66.76 Aligned_cols=121 Identities=25% Similarity=0.275 Sum_probs=80.1
Q ss_pred CceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHh
Q 023352 130 GKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEA 209 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~ 209 (283)
.++.||+|||||+.-+... | .-.-..++.=---|+.+|+......|++|.++|+|+..+...|..
T Consensus 374 n~kiVVsDiDGTITkSD~~------G---------hv~~miGkdwth~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrs 438 (580)
T COG5083 374 NKKIVVSDIDGTITKSDAL------G---------HVKQMIGKDWTHNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRS 438 (580)
T ss_pred CCcEEEEecCCcEEehhhH------H---------HHHHHhccchhhcchhhhhhhhccCceEEEEEecccccchhhhhh
Confidence 4568999999999865321 0 000011222234577888888889999999999999988888876
Q ss_pred hhh---hccchhhh-hhhhcccCC---------CCceeEEeechhhhHhhhhCceE---eccCccchhhhccC
Q 023352 210 NLK---HAGFDTWE-KLILKGSSH---------SGETAVVYKSSERKKLEMKGYRI---IGNIGDQWSDLLGT 266 (283)
Q Consensus 210 ~L~---~~G~~~~~-~lilr~~~~---------~~KP~~~yK~~~r~~l~~~gy~i---v~~IGDq~sDl~ga 266 (283)
-|+ +.|+.-|+ .+||+++.. -+||. .||.+..+.|+..+... .+-+|...+|...-
T Consensus 439 ylrnieQngykLpdgpviLspd~t~aal~relIlrkpE-~FKiayLndl~slf~e~~PFyAGFGNriTDvisY 510 (580)
T COG5083 439 YLRNIEQNGYKLPDGPVILSPDRTMAALYRELILRKPE-VFKIAYLNDLKSLFIEFDPFYAGFGNRITDVISY 510 (580)
T ss_pred HHHhhhhcCccCCCCCEeeccchhhhhhhhhhhhcChH-HHHHHHHHHHHHhhCcCChhhccccccchhheee
Confidence 654 45775543 456655431 12322 47888888888755442 35689999998865
No 154
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=97.08 E-value=0.00024 Score=65.26 Aligned_cols=96 Identities=14% Similarity=0.052 Sum_probs=60.4
Q ss_pred CCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhc---c-cCCCCceeEEeechhhhHhhhhC
Q 023352 174 PPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILK---G-SSHSGETAVVYKSSERKKLEMKG 249 (283)
Q Consensus 174 ~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr---~-~~~~~KP~~~yK~~~r~~l~~~g 249 (283)
-.++++.++++.|+++|. ++++||++.... ....+...|...++..+.. . ....+||++.......+.+. ..
T Consensus 143 ~~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~--~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~-~~ 218 (279)
T TIGR01452 143 FSYAKLREACAHLREPGC-LFVATNRDPWHP--LSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFS-ID 218 (279)
T ss_pred CCHHHHHHHHHHHhcCCC-EEEEeCCCCCCC--CcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhC-CC
Confidence 357999999999999997 789999884321 1222334455555444432 1 12367888854433333331 12
Q ss_pred ceEeccCccch-hhhccC-ccCCccc
Q 023352 250 YRIIGNIGDQW-SDLLGT-NAGNRTF 273 (283)
Q Consensus 250 y~iv~~IGDq~-sDl~ga-~ag~r~f 273 (283)
.+.+++|||+. +|+.+| ++|++++
T Consensus 219 ~~~~lmIGD~~~tDI~~A~~aGi~si 244 (279)
T TIGR01452 219 PARTLMVGDRLETDILFGHRCGMTTV 244 (279)
T ss_pred hhhEEEECCChHHHHHHHHHcCCcEE
Confidence 34689999995 999998 5676654
No 155
>PLN03017 trehalose-phosphatase
Probab=97.03 E-value=0.0015 Score=62.70 Aligned_cols=53 Identities=21% Similarity=0.132 Sum_probs=39.8
Q ss_pred cCCCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 127 AGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 127 ~~~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
...++-+++||+||||+.-.. + ...+.+-+++.+.|++|. +|++++++|||+.
T Consensus 107 ~~~k~~llflD~DGTL~Piv~------------~---------p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~ 159 (366)
T PLN03017 107 SRGKQIVMFLDYDGTLSPIVD------------D---------PDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCI 159 (366)
T ss_pred hcCCCeEEEEecCCcCcCCcC------------C---------cccccCCHHHHHHHHHHh-cCCcEEEEeCCCH
Confidence 345667888999999993100 0 012357789999999999 7899999999994
No 156
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=97.02 E-value=0.0007 Score=68.48 Aligned_cols=80 Identities=28% Similarity=0.336 Sum_probs=58.3
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCce
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYR 251 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~ 251 (283)
..++.|++.+++++|+++|++++++||.+ +..+...+++.|++.+. .. +| .-|....++++..+ +
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~---~~~a~~ia~~lgi~~~~-----~~----~p--~~K~~~v~~l~~~~-~ 467 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDN---RKTAKAVAKELGINVRA-----EV----LP--DDKAALIKELQEKG-R 467 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCC---HHHHHHHHHHcCCcEEc-----cC----Ch--HHHHHHHHHHHHcC-C
Confidence 46799999999999999999999999998 45667777888986211 11 11 12333444555444 5
Q ss_pred EeccCccchhhhccC
Q 023352 252 IIGNIGDQWSDLLGT 266 (283)
Q Consensus 252 iv~~IGDq~sDl~ga 266 (283)
.+++|||..+|+.+.
T Consensus 468 ~v~~VGDg~nD~~al 482 (562)
T TIGR01511 468 VVAMVGDGINDAPAL 482 (562)
T ss_pred EEEEEeCCCccHHHH
Confidence 689999999999876
No 157
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=96.95 E-value=0.00051 Score=61.25 Aligned_cols=41 Identities=22% Similarity=0.183 Sum_probs=28.7
Q ss_pred eEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 133 IWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 133 avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
.+++|+||||+++.+. ++...++++ ++++|++++++|||+.
T Consensus 1 li~~DlDgTLl~~~~~---------------------------~~~~~~~~~-~~~~gi~~viaTGR~~ 41 (236)
T TIGR02471 1 LIITDLDNTLLGDDEG---------------------------LASFVELLR-GSGDAVGFGIATGRSV 41 (236)
T ss_pred CeEEeccccccCCHHH---------------------------HHHHHHHHH-hcCCCceEEEEeCCCH
Confidence 3789999999974210 112225666 5888999999999983
No 158
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=96.92 E-value=0.00039 Score=63.33 Aligned_cols=97 Identities=11% Similarity=0.100 Sum_probs=63.9
Q ss_pred CChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-C---CCceeEEeechhhhHhhhhCc
Q 023352 175 PLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-H---SGETAVVYKSSERKKLEMKGY 250 (283)
Q Consensus 175 ~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-~---~~KP~~~yK~~~r~~l~~~gy 250 (283)
.++++.+.++.|++.|.+++++||++.. .....+...|...++..+....+ . .+||++.+......++. ..-
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~---~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~-~~~ 196 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRY---YKRKDGLALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATG-CEP 196 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCC---CcCCCCCCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhC-CCh
Confidence 3678888899999999999999999843 33344555677666665554332 1 36887744333333322 112
Q ss_pred eEeccCccch-hhhccC-ccCCccccC
Q 023352 251 RIIGNIGDQW-SDLLGT-NAGNRTFKL 275 (283)
Q Consensus 251 ~iv~~IGDq~-sDl~ga-~ag~r~fkL 275 (283)
+.+++|||+. +|+.++ .+|.+++.+
T Consensus 197 ~~~~~vGD~~~~Di~~a~~~G~~~i~v 223 (257)
T TIGR01458 197 EEAVMIGDDCRDDVGGAQDCGMRGIQV 223 (257)
T ss_pred hhEEEECCCcHHHHHHHHHcCCeEEEE
Confidence 4589999996 999988 557666544
No 159
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=96.86 E-value=0.00098 Score=57.43 Aligned_cols=139 Identities=16% Similarity=0.149 Sum_probs=62.1
Q ss_pred ceeEEEecccccccCCccccccCCCcccCCchhhh-hhh--hcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCccccccc
Q 023352 131 KNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFN-EWV--NTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVT 207 (283)
Q Consensus 131 ~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~-~~~--~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T 207 (283)
|+.||||+|.||-+-.-|.. . ..||....=. .-+ .......+|++.+.|+.|+++|++|+++|--++ -+..
T Consensus 3 PklvvFDLD~TlW~~~~~~~---~-~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~--P~~A 76 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTH---V-GPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDE--PDWA 76 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTS---S--S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S---HHHH
T ss_pred CcEEEEcCcCCCCchhHhhc---c-CCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCC--hHHH
Confidence 68999999999986422211 1 1122211100 111 112357899999999999999999999996443 2456
Q ss_pred HhhhhhccchhhhhhhhcccCCCCceeE-Ee---echhhhHhhh---hCceEeccCccchhhhccC-ccCCccccCCC
Q 023352 208 EANLKHAGFDTWEKLILKGSSHSGETAV-VY---KSSERKKLEM---KGYRIIGNIGDQWSDLLGT-NAGNRTFKLPD 277 (283)
Q Consensus 208 ~~~L~~~G~~~~~~lilr~~~~~~KP~~-~y---K~~~r~~l~~---~gy~iv~~IGDq~sDl~ga-~ag~r~fkLPN 277 (283)
.+.|+.+++.....-...-.+.- ... .| |..-++.|.+ -.|...++++|...-+.-. .-|-..+..||
T Consensus 77 ~~~L~~l~i~~~~~~~~~~~~~F--~~~eI~~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~ 152 (169)
T PF12689_consen 77 RELLKLLEIDDADGDGVPLIEYF--DYLEIYPGSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPD 152 (169)
T ss_dssp HHHHHHTT-C----------CCE--CEEEESSS-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SS
T ss_pred HHHHHhcCCCccccccccchhhc--chhheecCchHHHHHHHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCC
Confidence 67788888872111111000000 001 11 2222333332 2366788999988444333 24555555665
No 160
>PLN02151 trehalose-phosphatase
Probab=96.75 E-value=0.0033 Score=60.19 Aligned_cols=52 Identities=15% Similarity=0.122 Sum_probs=39.8
Q ss_pred cCCCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCC
Q 023352 127 AGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRP 200 (283)
Q Consensus 127 ~~~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~ 200 (283)
...++-+++||+||||+.-.+ ....+.+-|++.+.|+.|. ++++++|+|||+
T Consensus 94 ~~~~~~ll~lDyDGTL~PIv~---------------------~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~ 145 (354)
T PLN02151 94 SEGKQIVMFLDYDGTLSPIVD---------------------DPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRC 145 (354)
T ss_pred hcCCceEEEEecCccCCCCCC---------------------CcccccCCHHHHHHHHHHh-cCCCEEEEECCC
Confidence 345677899999999994211 0123567899999999998 567999999998
No 161
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=96.70 E-value=0.0026 Score=58.87 Aligned_cols=73 Identities=19% Similarity=0.273 Sum_probs=58.1
Q ss_pred CCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccH
Q 023352 129 DGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTE 208 (283)
Q Consensus 129 ~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~ 208 (283)
..+..||||+|+||+.... ....+-|.+.+-|+.|++.|.-+++=|... ++...
T Consensus 120 ~~phVIVfDlD~TLItd~~-----------------------~v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~---~eHV~ 173 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEG-----------------------DVRIRDPAVYDSLRELKEQGCVLVLWSYGN---REHVR 173 (297)
T ss_pred CCCcEEEEECCCcccccCC-----------------------ccccCChHHHHHHHHHHHcCCEEEEecCCC---HHHHH
Confidence 4567999999999996421 112356888899999999999999999888 66778
Q ss_pred hhhhhccchhhhhhhhccc
Q 023352 209 ANLKHAGFDTWEKLILKGS 227 (283)
Q Consensus 209 ~~L~~~G~~~~~~lilr~~ 227 (283)
..|++.++..+|++++.+.
T Consensus 174 ~sl~~~~L~~~Fd~ii~~G 192 (297)
T PF05152_consen 174 HSLKELKLEGYFDIIICGG 192 (297)
T ss_pred HHHHHhCCccccEEEEeCC
Confidence 8888889998898888653
No 162
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=96.68 E-value=0.0034 Score=56.53 Aligned_cols=51 Identities=27% Similarity=0.311 Sum_probs=38.8
Q ss_pred CceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHc-CeEEEEEeCCCc
Q 023352 130 GKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLL-GIKIVFLTGRPE 201 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~-GikI~ivTgR~e 201 (283)
++.+++||+||||....+ .| ....+-|++.++|+.|.+. +..++|+|||+-
T Consensus 2 ~~~~l~lD~DGTL~~~~~---------~p------------~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~ 53 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVP---------DP------------DAAVVSDRLLTILQKLAARPHNAIWIISGRKF 53 (244)
T ss_pred CcEEEEEecCccccCCcC---------CC------------cccCCCHHHHHHHHHHHhCCCCeEEEEECCCh
Confidence 467899999999996321 01 1346779999999999877 567899999974
No 163
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=96.67 E-value=0.0014 Score=54.90 Aligned_cols=119 Identities=14% Similarity=0.086 Sum_probs=60.1
Q ss_pred eeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhh
Q 023352 132 NIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANL 211 (283)
Q Consensus 132 ~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L 211 (283)
+.+|||+||||+++...-.. +.+.. ...-.........||+.+||+.+ ++.+.|++.|+..+.+.....+.|
T Consensus 1 k~LVlDLD~TLv~~~~~~~~------~~~~~-~~~~~~~~~v~~RP~l~~FL~~l-~~~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPL------PYDFK-IIDQRGGYYVKLRPGLDEFLEEL-SKHYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCT------T-SEE-EETEEEEEEEEE-TTHHHHHHHH-HHHCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCC------Ccccc-eeccccceeEeeCchHHHHHHHH-HHhceEEEEEeehhhhhhHHHHhh
Confidence 47899999999987432110 00000 00000011234689999999999 555999999999977766677777
Q ss_pred hhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhC--ceEeccCccchhhhcc
Q 023352 212 KHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKG--YRIIGNIGDQWSDLLG 265 (283)
Q Consensus 212 ~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~g--y~iv~~IGDq~sDl~g 265 (283)
...+-.. ...+.+......+... .| .|...| ..-++.|+|+..-...
T Consensus 73 dp~~~~~-~~~~~r~~~~~~~~~~-~K-----dL~~l~~~~~~vvivDD~~~~~~~ 121 (159)
T PF03031_consen 73 DPNGKLF-SRRLYRDDCTFDKGSY-IK-----DLSKLGRDLDNVVIVDDSPRKWAL 121 (159)
T ss_dssp TTTTSSE-EEEEEGGGSEEETTEE-E-------GGGSSS-GGGEEEEES-GGGGTT
T ss_pred hhhcccc-cccccccccccccccc-cc-----chHHHhhccccEEEEeCCHHHeec
Confidence 6432111 2233343221111011 23 233323 3457889998865433
No 164
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.62 E-value=0.0034 Score=65.41 Aligned_cols=60 Identities=22% Similarity=0.295 Sum_probs=44.1
Q ss_pred CCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHc-CeEEEEEeCCCccccccc
Q 023352 129 DGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLL-GIKIVFLTGRPEDQRNVT 207 (283)
Q Consensus 129 ~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~-GikI~ivTgR~e~~r~~T 207 (283)
.+++.++||+||||++.... .....+-+.+.+.|+.|.+. |+.++++|||+ +...
T Consensus 490 ~~~rLi~~D~DGTL~~~~~~---------------------~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~---~~~l 545 (726)
T PRK14501 490 ASRRLLLLDYDGTLVPFAPD---------------------PELAVPDKELRDLLRRLAADPNTDVAIISGRD---RDTL 545 (726)
T ss_pred ccceEEEEecCccccCCCCC---------------------cccCCCCHHHHHHHHHHHcCCCCeEEEEeCCC---HHHH
Confidence 45689999999999975210 01235668999999999994 99999999998 3333
Q ss_pred Hhhhh
Q 023352 208 EANLK 212 (283)
Q Consensus 208 ~~~L~ 212 (283)
.+++.
T Consensus 546 ~~~~~ 550 (726)
T PRK14501 546 ERWFG 550 (726)
T ss_pred HHHhC
Confidence 44444
No 165
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=96.55 E-value=0.0047 Score=56.93 Aligned_cols=61 Identities=21% Similarity=0.194 Sum_probs=46.9
Q ss_pred CCCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHc-CeEEEEEeCCCcccccc
Q 023352 128 GDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLL-GIKIVFLTGRPEDQRNV 206 (283)
Q Consensus 128 ~~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~-GikI~ivTgR~e~~r~~ 206 (283)
..++.+++||.||||.+-.++ ....++-++++++|+.|.++ ...++|+|||+. ..
T Consensus 15 ~a~~~~~~lDyDGTl~~i~~~---------------------p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~---~~ 70 (266)
T COG1877 15 NARKRLLFLDYDGTLTEIVPH---------------------PEAAVPDDRLLSLLQDLASDPRNVVAIISGRSL---AE 70 (266)
T ss_pred cccceEEEEeccccccccccC---------------------ccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCH---HH
Confidence 457889999999999975431 12578999999999999988 457999999993 34
Q ss_pred cHhhhh
Q 023352 207 TEANLK 212 (283)
Q Consensus 207 T~~~L~ 212 (283)
..+++.
T Consensus 71 l~~~~~ 76 (266)
T COG1877 71 LERLFG 76 (266)
T ss_pred HHHhcC
Confidence 445554
No 166
>PLN02580 trehalose-phosphatase
Probab=96.36 E-value=0.0077 Score=58.29 Aligned_cols=60 Identities=15% Similarity=0.100 Sum_probs=44.6
Q ss_pred CCCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCccccccc
Q 023352 128 GDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVT 207 (283)
Q Consensus 128 ~~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T 207 (283)
..++-+++||.||||..-.+ + -..+.+-|++.+.|+.|.+. .+++|||||+ +...
T Consensus 116 ~~k~~~LfLDyDGTLaPIv~------------~---------Pd~A~~s~~~~~aL~~La~~-~~VAIVSGR~---~~~L 170 (384)
T PLN02580 116 KGKKIALFLDYDGTLSPIVD------------D---------PDRALMSDAMRSAVKNVAKY-FPTAIISGRS---RDKV 170 (384)
T ss_pred hcCCeEEEEecCCccCCCCC------------C---------cccccCCHHHHHHHHHHhhC-CCEEEEeCCC---HHHH
Confidence 45677899999999985211 1 12456779999999999988 5899999999 5555
Q ss_pred Hhhhh
Q 023352 208 EANLK 212 (283)
Q Consensus 208 ~~~L~ 212 (283)
.+++.
T Consensus 171 ~~~l~ 175 (384)
T PLN02580 171 YELVG 175 (384)
T ss_pred HHHhC
Confidence 55554
No 167
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=96.35 E-value=0.0015 Score=69.43 Aligned_cols=91 Identities=19% Similarity=0.285 Sum_probs=62.4
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-----------------CCCcee
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-----------------HSGETA 234 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-----------------~~~KP~ 234 (283)
..|+.|++.+.++.|++.|+++.++||.. ...+....++.|+...+...+.+.+ -.....
T Consensus 526 ~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~---~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~ 602 (884)
T TIGR01522 526 NDPPRPGVKEAVTTLITGGVRIIMITGDS---QETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARAS 602 (884)
T ss_pred cCcchhHHHHHHHHHHHCCCeEEEECCCC---HHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECC
Confidence 46899999999999999999999999988 4445556677788643221111111 001123
Q ss_pred EEeechhhhHhhhhCceEeccCccchhhhccC
Q 023352 235 VVYKSSERKKLEMKGYRIIGNIGDQWSDLLGT 266 (283)
Q Consensus 235 ~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~ga 266 (283)
|.-|...-+.+++.|+ +++++||..+|..+.
T Consensus 603 P~~K~~iv~~lq~~g~-~v~mvGDGvND~pAl 633 (884)
T TIGR01522 603 PEHKMKIVKALQKRGD-VVAMTGDGVNDAPAL 633 (884)
T ss_pred HHHHHHHHHHHHHCCC-EEEEECCCcccHHHH
Confidence 3446666666776674 689999999999765
No 168
>COG4996 Predicted phosphatase [General function prediction only]
Probab=96.04 E-value=0.0069 Score=50.17 Aligned_cols=87 Identities=15% Similarity=0.100 Sum_probs=58.7
Q ss_pred eEEEecccccccCCccccccCCCcccCCchhhhhhhh--cCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhh
Q 023352 133 IWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVN--TGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEAN 210 (283)
Q Consensus 133 avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~--~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~ 210 (283)
+|+||.|+|+-|.-.... + ..||..-+=+.-+. ..+...+|.++++++.++..|+-+...|=..+ ....+.
T Consensus 2 ~i~~d~d~t~wdhh~iSs---l-~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~---~kA~~a 74 (164)
T COG4996 2 AIVFDADKTLWDHHNISS---L-EPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFE---DKAIKA 74 (164)
T ss_pred cEEEeCCCcccccccchh---c-CCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCch---HHHHHH
Confidence 799999999998522110 0 01222111111111 12357899999999999999998888887773 456788
Q ss_pred hhhccchhhhhhhhcc
Q 023352 211 LKHAGFDTWEKLILKG 226 (283)
Q Consensus 211 L~~~G~~~~~~lilr~ 226 (283)
|+.+|+..||+.++-.
T Consensus 75 Lral~~~~yFhy~Vie 90 (164)
T COG4996 75 LRALDLLQYFHYIVIE 90 (164)
T ss_pred HHHhchhhhEEEEEec
Confidence 9999999988766543
No 169
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=95.96 E-value=0.012 Score=62.51 Aligned_cols=50 Identities=14% Similarity=0.224 Sum_probs=39.6
Q ss_pred CCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHH-HHcCeEEEEEeCCCc
Q 023352 129 DGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKL-LLLGIKIVFLTGRPE 201 (283)
Q Consensus 129 ~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L-~~~GikI~ivTgR~e 201 (283)
.++.++++|+||||+...+. ...+-|++.++|+.| .+.|..++++|||+.
T Consensus 594 ~~~rlI~LDyDGTLlp~~~~-----------------------~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~ 644 (854)
T PLN02205 594 TTTRAILLDYDGTLMPQASI-----------------------DKSPSSKSIDILNTLCRDKNNMVFIVSARSR 644 (854)
T ss_pred hcCeEEEEecCCcccCCccc-----------------------cCCCCHHHHHHHHHHHhcCCCEEEEEeCCCH
Confidence 35689999999999964210 234568999999998 678999999999983
No 170
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=95.94 E-value=0.023 Score=53.53 Aligned_cols=69 Identities=23% Similarity=0.290 Sum_probs=49.0
Q ss_pred CCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHc----CeEEEEEeCCCcccc
Q 023352 129 DGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLL----GIKIVFLTGRPEDQR 204 (283)
Q Consensus 129 ~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~----GikI~ivTgR~e~~r 204 (283)
..+-+++|||||+|+-. ..++|++.+.++.|.+. .++.+|+||..--..
T Consensus 33 ~~~fgfafDIDGVL~RG---------------------------~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E 85 (389)
T KOG1618|consen 33 PPTFGFAFDIDGVLFRG---------------------------HRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILE 85 (389)
T ss_pred CCceeEEEecccEEEec---------------------------CCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcch
Confidence 45668999999999842 46899999999999988 899999999864332
Q ss_pred -cccHhhhhhccchhh-hhhhh
Q 023352 205 -NVTEANLKHAGFDTW-EKLIL 224 (283)
Q Consensus 205 -~~T~~~L~~~G~~~~-~~lil 224 (283)
..++..=..+|+..- +++|+
T Consensus 86 ~~rA~~lS~~Lgv~Vs~dqviq 107 (389)
T KOG1618|consen 86 SSRAQELSALLGVEVSADQVIQ 107 (389)
T ss_pred hhHHHHHHHhhCCccCHHHHHh
Confidence 223333344577642 34444
No 171
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=95.91 E-value=0.012 Score=51.89 Aligned_cols=70 Identities=21% Similarity=0.248 Sum_probs=48.1
Q ss_pred hhccCCCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCccc
Q 023352 124 LKLAGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQ 203 (283)
Q Consensus 124 ~~~~~~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~ 203 (283)
+.+...+++.+|+|+||||++...- . + ....-.-|++.+||+.+.+ .+.|+|-|+....+
T Consensus 14 ~~~~~~~kklLVLDLDeTLvh~~~~------~-----~--------~~~~~kRP~l~eFL~~~~~-~feIvVwTAa~~~y 73 (195)
T TIGR02245 14 LNPPREGKKLLVLDIDYTLFDHRSP------A-----E--------TGEELMRPYLHEFLTSAYE-DYDIVIWSATSMKW 73 (195)
T ss_pred cCCCCCCCcEEEEeCCCceEccccc------C-----C--------CceEEeCCCHHHHHHHHHh-CCEEEEEecCCHHH
Confidence 3445568899999999999974210 0 0 1122467999999999988 79999999988554
Q ss_pred ccccHhhhhhccc
Q 023352 204 RNVTEANLKHAGF 216 (283)
Q Consensus 204 r~~T~~~L~~~G~ 216 (283)
. ...|+..|+
T Consensus 74 a---~~~l~~l~~ 83 (195)
T TIGR02245 74 I---EIKMTELGV 83 (195)
T ss_pred H---HHHHHHhcc
Confidence 4 334444443
No 172
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=95.91 E-value=0.0081 Score=62.43 Aligned_cols=80 Identities=29% Similarity=0.362 Sum_probs=59.9
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCce
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYR 251 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~ 251 (283)
.+++.|++.+.++.|+++|++++++||-. +...+..-++.|+..+..-+ .| +-|...-++++++| +
T Consensus 535 ~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn---~~~A~~iA~~lGId~v~Ael-lP---------edK~~~V~~l~~~g-~ 600 (713)
T COG2217 535 ADELRPDAKEAIAALKALGIKVVMLTGDN---RRTAEAIAKELGIDEVRAEL-LP---------EDKAEIVRELQAEG-R 600 (713)
T ss_pred eCCCChhHHHHHHHHHHCCCeEEEEcCCC---HHHHHHHHHHcChHhheccC-Cc---------HHHHHHHHHHHhcC-C
Confidence 46899999999999999999999999977 44555556778997642211 12 22566777887666 5
Q ss_pred EeccCccchhhhcc
Q 023352 252 IIGNIGDQWSDLLG 265 (283)
Q Consensus 252 iv~~IGDq~sDl~g 265 (283)
.+++|||..||--+
T Consensus 601 ~VamVGDGINDAPA 614 (713)
T COG2217 601 KVAMVGDGINDAPA 614 (713)
T ss_pred EEEEEeCCchhHHH
Confidence 68999999999653
No 173
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=95.78 E-value=0.0065 Score=63.52 Aligned_cols=79 Identities=23% Similarity=0.203 Sum_probs=58.2
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCce
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYR 251 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~ 251 (283)
..++.|++.+.++.|+++|++++++||.+ +..+....++.|+..+..+ .+ .-|....+++++. .
T Consensus 566 ~d~~r~~a~~~i~~L~~~gi~~~llTGd~---~~~a~~ia~~lgi~~~~~~--~p---------~~K~~~v~~l~~~--~ 629 (741)
T PRK11033 566 QDTLRADARQAISELKALGIKGVMLTGDN---PRAAAAIAGELGIDFRAGL--LP---------EDKVKAVTELNQH--A 629 (741)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHcCCCeecCC--CH---------HHHHHHHHHHhcC--C
Confidence 46899999999999999999999999988 5567777888899643221 11 1233344455532 3
Q ss_pred EeccCccchhhhccC
Q 023352 252 IIGNIGDQWSDLLGT 266 (283)
Q Consensus 252 iv~~IGDq~sDl~ga 266 (283)
.+++|||..+|..+.
T Consensus 630 ~v~mvGDgiNDapAl 644 (741)
T PRK11033 630 PLAMVGDGINDAPAM 644 (741)
T ss_pred CEEEEECCHHhHHHH
Confidence 689999999998765
No 174
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=95.71 E-value=0.0075 Score=51.83 Aligned_cols=128 Identities=20% Similarity=0.181 Sum_probs=76.4
Q ss_pred eEEEecccccccCC-------ccccccCC--CcccC--------CchhhhhhhhcCC------CCCChhhHHHHHHHHHc
Q 023352 133 IWVFDIDETSLSNL-------PYYAKNGF--GVKPY--------NPTLFNEWVNTGK------APPLPESLKLYKKLLLL 189 (283)
Q Consensus 133 avVFDIDgTLldn~-------~y~~~~~~--g~~~~--------~~~~~~~~~~~~~------~~~ipga~eLl~~L~~~ 189 (283)
-+.+|||||+.+.. |+|.+.-- ....| ..++|.+|....+ ...-.++...|..+++.
T Consensus 8 ~~ciDIDGtit~~~t~~~~~n~~f~kslse~d~t~y~lhkil~i~~ee~~k~~e~~ea~l~ke~l~~q~v~~~L~~~~e~ 87 (194)
T COG5663 8 RCCIDIDGTITDDPTFAPYLNPAFEKSLSEADPTDYDLHKILNITTEEFWKWMEQTEAWLYKEALLAQLVKQVLPSLKEE 87 (194)
T ss_pred heeeccCCceecCcccchhccHHHHhhhhhcccccccHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhh
Confidence 46799999999842 11211000 00011 2356777776533 33345666667666655
Q ss_pred CeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCceEeccCccch-hhhccC-c
Q 023352 190 GIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQW-SDLLGT-N 267 (283)
Q Consensus 190 GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~-sDl~ga-~ 267 (283)
.+++++|+|.......|-.||....++. +.+.+.+. ++| + ...| .+++-+.+.|+. +-++.+ .
T Consensus 88 -~~L~~itar~~dl~~iT~~~l~~q~ih~-~~l~i~g~--h~K--V---~~vr------th~idlf~ed~~~na~~iAk~ 152 (194)
T COG5663 88 -HRLIYITARKADLTRITYAWLFIQNIHY-DHLEIVGL--HHK--V---EAVR------THNIDLFFEDSHDNAGQIAKN 152 (194)
T ss_pred -ceeeeeehhhHHHHHHHHHHHHHhccch-hhhhhhcc--ccc--c---hhhH------hhccCccccccCchHHHHHHh
Confidence 6899999999888888999999999984 77766543 333 0 1112 234557778877 333333 4
Q ss_pred cCCccccC
Q 023352 268 AGNRTFKL 275 (283)
Q Consensus 268 ag~r~fkL 275 (283)
+|.++..+
T Consensus 153 ~~~~vili 160 (194)
T COG5663 153 AGIPVILI 160 (194)
T ss_pred cCCcEEEe
Confidence 67665544
No 175
>PRK10671 copA copper exporting ATPase; Provisional
Probab=95.52 E-value=0.0098 Score=62.94 Aligned_cols=81 Identities=26% Similarity=0.337 Sum_probs=58.7
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCce
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYR 251 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~ 251 (283)
..++.|++.+.++.|+++|++++++||.+ +..+...+++.|+..++.-+ . | .-|....++++..+ .
T Consensus 648 ~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~---~~~a~~ia~~lgi~~~~~~~----~----p--~~K~~~i~~l~~~~-~ 713 (834)
T PRK10671 648 RDPLRSDSVAALQRLHKAGYRLVMLTGDN---PTTANAIAKEAGIDEVIAGV----L----P--DGKAEAIKRLQSQG-R 713 (834)
T ss_pred cCcchhhHHHHHHHHHHCCCeEEEEcCCC---HHHHHHHHHHcCCCEEEeCC----C----H--HHHHHHHHHHhhcC-C
Confidence 46789999999999999999999999988 44566677888986532111 0 1 12444445555444 3
Q ss_pred EeccCccchhhhccC
Q 023352 252 IIGNIGDQWSDLLGT 266 (283)
Q Consensus 252 iv~~IGDq~sDl~ga 266 (283)
.+++|||..+|+.+.
T Consensus 714 ~v~~vGDg~nD~~al 728 (834)
T PRK10671 714 QVAMVGDGINDAPAL 728 (834)
T ss_pred EEEEEeCCHHHHHHH
Confidence 589999999999876
No 176
>PLN02382 probable sucrose-phosphatase
Probab=95.49 E-value=0.02 Score=56.00 Aligned_cols=50 Identities=24% Similarity=0.253 Sum_probs=32.1
Q ss_pred CCCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCC
Q 023352 128 GDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRP 200 (283)
Q Consensus 128 ~~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~ 200 (283)
+..+-.|+-||||||+++.. . .....+....+++++.++|+.++++|||+
T Consensus 6 ~~~~~lI~sDLDGTLL~~~~--------~---------------~~~s~~~~~~l~~~~~~~gi~fv~aTGR~ 55 (413)
T PLN02382 6 GSPRLMIVSDLDHTMVDHHD--------P---------------ENLSLLRFNALWEAEYRHDSLLVFSTGRS 55 (413)
T ss_pred CCCCEEEEEcCCCcCcCCCC--------c---------------cchhHHHHHHHHHHhhcCCeeEEEEcCCC
Confidence 34466788899999997510 0 01112233444567778888888888887
No 177
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=95.47 E-value=0.0093 Score=49.35 Aligned_cols=82 Identities=16% Similarity=0.241 Sum_probs=57.6
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCce
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYR 251 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~ 251 (283)
....++.+.+.++.|++. +.|++.||-. .....+.++-.|++. .+++ -.. +++.|.....+|.+ .|.
T Consensus 28 gGklf~ev~e~iqeL~d~-V~i~IASgDr---~gsl~~lae~~gi~~-~rv~-a~a------~~e~K~~ii~eLkk-~~~ 94 (152)
T COG4087 28 GGKLFSEVSETIQELHDM-VDIYIASGDR---KGSLVQLAEFVGIPV-ERVF-AGA------DPEMKAKIIRELKK-RYE 94 (152)
T ss_pred CcEEcHhhHHHHHHHHHh-heEEEecCCc---chHHHHHHHHcCCce-eeee-ccc------CHHHHHHHHHHhcC-CCc
Confidence 357889999999999999 9999999965 233444455578775 2322 221 33456666777765 456
Q ss_pred EeccCccchhhhccC
Q 023352 252 IIGNIGDQWSDLLGT 266 (283)
Q Consensus 252 iv~~IGDq~sDl~ga 266 (283)
.+++|||.-+|+..-
T Consensus 95 k~vmVGnGaND~laL 109 (152)
T COG4087 95 KVVMVGNGANDILAL 109 (152)
T ss_pred EEEEecCCcchHHHh
Confidence 789999999997643
No 178
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=95.26 E-value=0.016 Score=60.75 Aligned_cols=90 Identities=19% Similarity=0.290 Sum_probs=58.1
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhh----hhhh----------------hcccCCCC
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTW----EKLI----------------LKGSSHSG 231 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~----~~li----------------lr~~~~~~ 231 (283)
..|+.|++.+.++.|++.|+++.++||.... .....-++.|+... +.+. +.......
T Consensus 440 ~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~---tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfA 516 (755)
T TIGR01647 440 FDPPRHDTKETIERARHLGVEVKMVTGDHLA---IAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFA 516 (755)
T ss_pred cCCChhhHHHHHHHHHHCCCeEEEECCCCHH---HHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEE
Confidence 4689999999999999999999999998843 33444456677530 1110 00000001
Q ss_pred ceeEEeechhhhHhhhhCceEeccCccchhhhcc
Q 023352 232 ETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLG 265 (283)
Q Consensus 232 KP~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~g 265 (283)
.-.|+-|...-+.+++.|+ +++++||..||.-+
T Consensus 517 r~~Pe~K~~iV~~lq~~G~-~VamvGDGvNDapA 549 (755)
T TIGR01647 517 EVFPEHKYEIVEILQKRGH-LVGMTGDGVNDAPA 549 (755)
T ss_pred ecCHHHHHHHHHHHHhcCC-EEEEEcCCcccHHH
Confidence 1123335566667777775 68999999999643
No 179
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.18 E-value=0.022 Score=51.10 Aligned_cols=55 Identities=15% Similarity=0.189 Sum_probs=37.0
Q ss_pred ceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhh
Q 023352 131 KNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEAN 210 (283)
Q Consensus 131 ~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~ 210 (283)
+..|..|||+||+... |+. ..+...+.+|++.|++|+++|+++........+.
T Consensus 7 ~~lIFtDlD~TLl~~~------------ye~---------------~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~ 59 (274)
T COG3769 7 PLLIFTDLDGTLLPHS------------YEW---------------QPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKS 59 (274)
T ss_pred ceEEEEcccCcccCCC------------CCC---------------CccchHHHHHHHcCCeEEEeccchHHHHHHHHHh
Confidence 4577889999999731 211 1234568889999999999999984333333333
Q ss_pred hh
Q 023352 211 LK 212 (283)
Q Consensus 211 L~ 212 (283)
|.
T Consensus 60 l~ 61 (274)
T COG3769 60 LG 61 (274)
T ss_pred cC
Confidence 43
No 180
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=95.13 E-value=0.018 Score=59.62 Aligned_cols=80 Identities=23% Similarity=0.260 Sum_probs=58.0
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCce
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYR 251 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~ 251 (283)
..++.|++.+.++.|++.|+++.++||.. .......-++.|+..+ +.+ . .|+-|....+++++.|.
T Consensus 444 ~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~---~~ta~~iA~~lGI~~v---~a~-~------~PedK~~~v~~lq~~g~- 509 (675)
T TIGR01497 444 KDIVKGGIKERFAQLRKMGIKTIMITGDN---RLTAAAIAAEAGVDDF---IAE-A------TPEDKIALIRQEQAEGK- 509 (675)
T ss_pred cccchhHHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHcCCCEE---EcC-C------CHHHHHHHHHHHHHcCC-
Confidence 46899999999999999999999999987 3344555567788642 111 1 12235555566665554
Q ss_pred EeccCccchhhhcc
Q 023352 252 IIGNIGDQWSDLLG 265 (283)
Q Consensus 252 iv~~IGDq~sDl~g 265 (283)
+++++||..+|.-+
T Consensus 510 ~VamvGDG~NDapA 523 (675)
T TIGR01497 510 LVAMTGDGTNDAPA 523 (675)
T ss_pred eEEEECCCcchHHH
Confidence 68999999999764
No 181
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=95.05 E-value=0.021 Score=59.18 Aligned_cols=79 Identities=24% Similarity=0.276 Sum_probs=56.9
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCce
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYR 251 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~ 251 (283)
..++.|++.+.+++|++.|++++.+||-.+. .....-++.|+..+ +-+ . .|+-|...-+++++.| +
T Consensus 439 ~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~---TA~aIA~elGI~~v---~A~-~------~PedK~~iV~~lQ~~G-~ 504 (673)
T PRK14010 439 KDVIKDGLVERFRELREMGIETVMCTGDNEL---TAATIAKEAGVDRF---VAE-C------KPEDKINVIREEQAKG-H 504 (673)
T ss_pred ecCCcHHHHHHHHHHHHCCCeEEEECCCCHH---HHHHHHHHcCCceE---EcC-C------CHHHHHHHHHHHHhCC-C
Confidence 4689999999999999999999999998743 33334456788642 111 1 1233556666777666 4
Q ss_pred EeccCccchhhhc
Q 023352 252 IIGNIGDQWSDLL 264 (283)
Q Consensus 252 iv~~IGDq~sDl~ 264 (283)
+++++||..||--
T Consensus 505 ~VaMtGDGvNDAP 517 (673)
T PRK14010 505 IVAMTGDGTNDAP 517 (673)
T ss_pred EEEEECCChhhHH
Confidence 6899999999964
No 182
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=94.87 E-value=0.049 Score=49.92 Aligned_cols=127 Identities=23% Similarity=0.231 Sum_probs=82.0
Q ss_pred CCceeEEEecccccccCCc--cccccCCCcccCCchhhhhhhhcCCCC-----CChhhHHHHHHHHHc------CeEEEE
Q 023352 129 DGKNIWVFDIDETSLSNLP--YYAKNGFGVKPYNPTLFNEWVNTGKAP-----PLPESLKLYKKLLLL------GIKIVF 195 (283)
Q Consensus 129 ~~~~avVFDIDgTLldn~~--y~~~~~~g~~~~~~~~~~~~~~~~~~~-----~ipga~eLl~~L~~~------GikI~i 195 (283)
+..--|.||-|++|.|... .|++.+. +.|.+.+...... |+..-++-|.+++++ -+.+++
T Consensus 119 ~~qlRIAFDgDaVLfsDesE~vy~~~GL-------~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtal 191 (264)
T PF06189_consen 119 DDQLRIAFDGDAVLFSDESERVYQEQGL-------EAFHEHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTAL 191 (264)
T ss_pred CCceEEEEcCCeEeecCcchHhHHhccH-------HHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEE
Confidence 3446799999999998532 3333221 2344444433222 344455556666644 478999
Q ss_pred EeCCCcccccccHhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCceEeccCccchhhhccCccCCccccC
Q 023352 196 LTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGTNAGNRTFKL 275 (283)
Q Consensus 196 vTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~ga~ag~r~fkL 275 (283)
||.|+....+-.++.|+.-|+..-+.++|.+.+ |....+.+ +.-++++||..=+.++....-+-.+
T Consensus 192 VTAR~apah~RvI~TLr~Wgv~vDEafFLgG~~---------K~~vL~~~-----~phIFFDDQ~~H~~~a~~~vps~hV 257 (264)
T PF06189_consen 192 VTARSAPAHERVIRTLRSWGVRVDEAFFLGGLP---------KGPVLKAF-----RPHIFFDDQDGHLESASKVVPSGHV 257 (264)
T ss_pred EEcCCCchhHHHHHHHHHcCCcHhHHHHhCCCc---------hhHHHHhh-----CCCEeecCchhhhhHhhcCCCEEec
Confidence 999997666778899999999986777887743 23333333 3458899999888888655444444
Q ss_pred C
Q 023352 276 P 276 (283)
Q Consensus 276 P 276 (283)
|
T Consensus 258 P 258 (264)
T PF06189_consen 258 P 258 (264)
T ss_pred c
Confidence 4
No 183
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=94.80 E-value=0.016 Score=62.12 Aligned_cols=90 Identities=21% Similarity=0.238 Sum_probs=58.4
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-----------------CCCcee
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-----------------HSGETA 234 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-----------------~~~KP~ 234 (283)
..|+.|++.+.++.|++.|+++.++||-.... ....-++.|+..-...++.+.+ --..-.
T Consensus 577 ~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~t---A~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~s 653 (941)
T TIGR01517 577 KDPLRPGVREAVQECQRAGITVRMVTGDNIDT---AKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSS 653 (941)
T ss_pred cCCCchhHHHHHHHHHHCCCEEEEECCCChHH---HHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECC
Confidence 46899999999999999999999999987432 2233345577421111111110 000112
Q ss_pred EEeechhhhHhhhhCceEeccCccchhhhcc
Q 023352 235 VVYKSSERKKLEMKGYRIIGNIGDQWSDLLG 265 (283)
Q Consensus 235 ~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~g 265 (283)
|+-|...-+.+++.|+ +++++||..||.-+
T Consensus 654 Pe~K~~iV~~lq~~g~-vVam~GDGvNDapA 683 (941)
T TIGR01517 654 PLDKQLLVLMLKDMGE-VVAVTGDGTNDAPA 683 (941)
T ss_pred HHHHHHHHHHHHHCCC-EEEEECCCCchHHH
Confidence 3346666677777776 68999999999853
No 184
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=94.80 E-value=0.037 Score=49.44 Aligned_cols=46 Identities=24% Similarity=0.278 Sum_probs=28.0
Q ss_pred EEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCe-EEEEEeCCCc
Q 023352 135 VFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGI-KIVFLTGRPE 201 (283)
Q Consensus 135 VFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~Gi-kI~ivTgR~e 201 (283)
+||.||||..-.+ . ...+.+.+++.++|+.|.+..- .|+++|||+.
T Consensus 1 ~lDyDGTL~p~~~---------~------------p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~ 47 (235)
T PF02358_consen 1 FLDYDGTLAPIVD---------D------------PDAAVPPPELRELLRALAADPNNTVAIVSGRSL 47 (235)
T ss_dssp EEE-TTTSS---S----------------------GGG----HHHHHHHHHHHHHSE--EEEE-SS-H
T ss_pred CcccCCccCCCCC---------C------------ccccCCCHHHHHHHHHHhccCCCEEEEEEeCCH
Confidence 5899999986321 0 1246788999999999998854 8999999984
No 185
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=94.62 E-value=0.013 Score=53.07 Aligned_cols=59 Identities=19% Similarity=0.200 Sum_probs=36.5
Q ss_pred ceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhh
Q 023352 131 KNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEAN 210 (283)
Q Consensus 131 ~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~ 210 (283)
+..++.|+|||+++.. ...+....++++...+.++.++++|||+ .....+.
T Consensus 2 ~~ll~sDlD~Tl~~~~--------------------------~~~~~~l~~~l~~~~~~~~~~v~~TGRs---~~~~~~~ 52 (247)
T PF05116_consen 2 PRLLASDLDGTLIDGD--------------------------DEALARLEELLEQQARPEILFVYVTGRS---LESVLRL 52 (247)
T ss_dssp SEEEEEETBTTTBHCH--------------------------HHHHHHHHHHHHHHHCCGEEEEEE-SS----HHHHHHH
T ss_pred CEEEEEECCCCCcCCC--------------------------HHHHHHHHHHHHHhhCCCceEEEECCCC---HHHHHHH
Confidence 4578999999999221 0122333344444457789999999999 4556667
Q ss_pred hhhccchh
Q 023352 211 LKHAGFDT 218 (283)
Q Consensus 211 L~~~G~~~ 218 (283)
+++.+++.
T Consensus 53 ~~~~~l~~ 60 (247)
T PF05116_consen 53 LREYNLPQ 60 (247)
T ss_dssp HHHCT-EE
T ss_pred HHhCCCCC
Confidence 77777664
No 186
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=94.52 E-value=0.03 Score=60.49 Aligned_cols=42 Identities=26% Similarity=0.298 Sum_probs=33.8
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGF 216 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~ 216 (283)
..|+.|++.+.+++|+++|+++.++|||... ......++.|+
T Consensus 566 ~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~---ta~~ia~~~gi 607 (997)
T TIGR01106 566 IDPPRAAVPDAVGKCRSAGIKVIMVTGDHPI---TAKAIAKGVGI 607 (997)
T ss_pred cCCChHHHHHHHHHHHHCCCeEEEECCCCHH---HHHHHHHHcCC
Confidence 5799999999999999999999999999943 33444455555
No 187
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=94.49 E-value=0.032 Score=57.81 Aligned_cols=79 Identities=24% Similarity=0.301 Sum_probs=56.5
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCce
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYR 251 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~ 251 (283)
..++.|++.+.+++|++.|++++++||-.. ......-++.|+..+ +-+ . .|+-|...-+++++.| +
T Consensus 443 ~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~---~TA~aIA~elGId~v---~A~-~------~PedK~~iV~~lQ~~G-~ 508 (679)
T PRK01122 443 KDIVKPGIKERFAELRKMGIKTVMITGDNP---LTAAAIAAEAGVDDF---LAE-A------TPEDKLALIRQEQAEG-R 508 (679)
T ss_pred eccCchhHHHHHHHHHHCCCeEEEECCCCH---HHHHHHHHHcCCcEE---Ecc-C------CHHHHHHHHHHHHHcC-C
Confidence 468899999999999999999999999763 333444466788642 111 1 1233555666677666 4
Q ss_pred EeccCccchhhhc
Q 023352 252 IIGNIGDQWSDLL 264 (283)
Q Consensus 252 iv~~IGDq~sDl~ 264 (283)
+++++||..||--
T Consensus 509 ~VaMtGDGvNDAP 521 (679)
T PRK01122 509 LVAMTGDGTNDAP 521 (679)
T ss_pred eEEEECCCcchHH
Confidence 6899999999964
No 188
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=94.47 E-value=0.03 Score=48.92 Aligned_cols=93 Identities=17% Similarity=0.181 Sum_probs=53.8
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhh--hhc---c----chhhhhhhhcccCCCCceeEEeechhh
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANL--KHA---G----FDTWEKLILKGSSHSGETAVVYKSSER 242 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L--~~~---G----~~~~~~lilr~~~~~~KP~~~yK~~~r 242 (283)
+++.+|.+.+.+++.+++|+++++-|+.+-. .++| ... . |.+|++.-..+..+. ..| ..+.
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~-----AQkL~Fghs~agdL~~lfsGyfDttiG~KrE~----~SY-~kIa 170 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVK-----AQKLFFGHSDAGDLNSLFSGYFDTTIGKKRES----QSY-AKIA 170 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCch-----hHHHhhcccccccHHhhhcceeeccccccccc----hhH-HHHH
Confidence 4688999999999999999999999998722 2222 111 1 222332211111110 011 1111
Q ss_pred hHhhhhCceEeccCccchhhhccC-ccCCccccC
Q 023352 243 KKLEMKGYRIIGNIGDQWSDLLGT-NAGNRTFKL 275 (283)
Q Consensus 243 ~~l~~~gy~iv~~IGDq~sDl~ga-~ag~r~fkL 275 (283)
..+ ...-..++++-|+...+.++ .+|++|..+
T Consensus 171 ~~i-Gl~p~eilFLSDn~~EL~AA~~vGl~t~l~ 203 (229)
T COG4229 171 GDI-GLPPAEILFLSDNPEELKAAAGVGLATGLA 203 (229)
T ss_pred Hhc-CCCchheEEecCCHHHHHHHHhcchheeee
Confidence 111 11234578899999999887 567777654
No 189
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=94.42 E-value=0.07 Score=57.13 Aligned_cols=70 Identities=16% Similarity=0.161 Sum_probs=46.2
Q ss_pred CCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHc-CeEEEEEeCCCccccccc
Q 023352 129 DGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLL-GIKIVFLTGRPEDQRNVT 207 (283)
Q Consensus 129 ~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~-GikI~ivTgR~e~~r~~T 207 (283)
.++.+++||.||||..-.+.- +....-+....+.+-|+++++|+.|.+. +..|+|+|||+ ++..
T Consensus 589 a~~RLlfLDyDGTLap~~~~P------------~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~---~~~L 653 (934)
T PLN03064 589 SNNRLLILGFNATLTEPVDTP------------GRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSD---RSVL 653 (934)
T ss_pred ccceEEEEecCceeccCCCCc------------ccccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCC---HHHH
Confidence 356789999999998642210 0000001112356778999999999876 78899999999 5555
Q ss_pred Hhhhhh
Q 023352 208 EANLKH 213 (283)
Q Consensus 208 ~~~L~~ 213 (283)
.++|..
T Consensus 654 e~~fg~ 659 (934)
T PLN03064 654 DENFGE 659 (934)
T ss_pred HHHhCC
Confidence 566644
No 190
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=94.22 E-value=0.036 Score=59.30 Aligned_cols=88 Identities=25% Similarity=0.325 Sum_probs=58.2
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-----------------CCCcee
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-----------------HSGETA 234 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-----------------~~~KP~ 234 (283)
..|+.|++.+.++.|++.|+++.++||-.+. .+...-++.|+.. ++. +.+.+ -...-.
T Consensus 548 ~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~---tA~~IA~~lGI~~-~~v-~~G~el~~l~~~el~~~~~~~~VfAr~s 622 (902)
T PRK10517 548 LDPPKETTAPALKALKASGVTVKILTGDSEL---VAAKVCHEVGLDA-GEV-LIGSDIETLSDDELANLAERTTLFARLT 622 (902)
T ss_pred hCcchhhHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHHcCCCc-cCc-eeHHHHHhCCHHHHHHHHhhCcEEEEcC
Confidence 4789999999999999999999999997743 3344446668752 111 11110 001112
Q ss_pred EEeechhhhHhhhhCceEeccCccchhhhcc
Q 023352 235 VVYKSSERKKLEMKGYRIIGNIGDQWSDLLG 265 (283)
Q Consensus 235 ~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~g 265 (283)
|+-|...-+.+++.|+ +++++||..||.-+
T Consensus 623 Pe~K~~IV~~Lq~~G~-vVam~GDGvNDaPA 652 (902)
T PRK10517 623 PMHKERIVTLLKREGH-VVGFMGDGINDAPA 652 (902)
T ss_pred HHHHHHHHHHHHHCCC-EEEEECCCcchHHH
Confidence 3336666667777675 68999999999653
No 191
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=94.11 E-value=0.042 Score=58.52 Aligned_cols=89 Identities=25% Similarity=0.292 Sum_probs=58.0
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhccc----------------CCCCceeE
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGS----------------SHSGETAV 235 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~----------------~~~~KP~~ 235 (283)
..|+.|++.+.++.|++.|+++.++||-... .....-++.|+.. .+.+...+ .....-.|
T Consensus 513 ~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~---tA~aIA~~lGI~~-~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~P 588 (867)
T TIGR01524 513 LDPPKESTKEAIAALFKNGINVKVLTGDNEI---VTARICQEVGIDA-NDFLLGADIEELSDEELARELRKYHIFARLTP 588 (867)
T ss_pred eCCCchhHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHHcCCCC-CCeeecHhhhhCCHHHHHHHhhhCeEEEECCH
Confidence 5789999999999999999999999997643 3333445668752 11111100 00000122
Q ss_pred EeechhhhHhhhhCceEeccCccchhhhcc
Q 023352 236 VYKSSERKKLEMKGYRIIGNIGDQWSDLLG 265 (283)
Q Consensus 236 ~yK~~~r~~l~~~gy~iv~~IGDq~sDl~g 265 (283)
+-|...-+.+++.|+ +++++||..||.-+
T Consensus 589 e~K~~iV~~lq~~G~-vVam~GDGvNDapA 617 (867)
T TIGR01524 589 MQKSRIIGLLKKAGH-TVGFLGDGINDAPA 617 (867)
T ss_pred HHHHHHHHHHHhCCC-EEEEECCCcccHHH
Confidence 335666667777775 68999999999754
No 192
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=94.09 E-value=0.098 Score=55.30 Aligned_cols=64 Identities=13% Similarity=0.105 Sum_probs=45.1
Q ss_pred CCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHc-CeEEEEEeCCCccccccc
Q 023352 129 DGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLL-GIKIVFLTGRPEDQRNVT 207 (283)
Q Consensus 129 ~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~-GikI~ivTgR~e~~r~~T 207 (283)
.++.+++||.||||..-.+ .+-+ .....+-|++.++|+.|.+. +..|+|+|||+ ++..
T Consensus 505 a~~rll~LDyDGTL~~~~~---------~~~~---------p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~---~~~L 563 (797)
T PLN03063 505 SNNRLLILGFYGTLTEPRN---------SQIK---------EMDLGLHPELKETLKALCSDPKTTVVVLSRSG---KDIL 563 (797)
T ss_pred ccCeEEEEecCccccCCCC---------Cccc---------cccCCCCHHHHHHHHHHHcCCCCEEEEEeCCC---HHHH
Confidence 3467899999999984211 0000 12356779999999999876 78899999998 5555
Q ss_pred Hhhhhh
Q 023352 208 EANLKH 213 (283)
Q Consensus 208 ~~~L~~ 213 (283)
.++|..
T Consensus 564 ~~~~~~ 569 (797)
T PLN03063 564 DKNFGE 569 (797)
T ss_pred HHHhCC
Confidence 666643
No 193
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=93.83 E-value=0.048 Score=58.40 Aligned_cols=91 Identities=23% Similarity=0.299 Sum_probs=56.8
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhh----hhhcccC-C----------CC-----
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEK----LILKGSS-H----------SG----- 231 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~----lilr~~~-~----------~~----- 231 (283)
+.|+.|++.+.++.|++.|+++.++||... ..+....++.|+..... ..+.+.. + ..
T Consensus 535 ~Dplr~~v~e~I~~l~~aGI~v~miTGD~~---~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ 611 (917)
T TIGR01116 535 LDPPRPEVADAIEKCRTAGIRVIMITGDNK---ETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLF 611 (917)
T ss_pred eCCCchhHHHHHHHHHHCCCEEEEecCCCH---HHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEE
Confidence 578999999999999999999999999873 33445555667642110 0111100 0 00
Q ss_pred -ceeEEeechhhhHhhhhCceEeccCccchhhhccC
Q 023352 232 -ETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGT 266 (283)
Q Consensus 232 -KP~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~ga 266 (283)
...|.-|...-+.+++.|+ +++++||..+|..+-
T Consensus 612 ar~~P~~K~~iV~~lq~~g~-~va~iGDG~ND~~al 646 (917)
T TIGR01116 612 SRVEPSHKSELVELLQEQGE-IVAMTGDGVNDAPAL 646 (917)
T ss_pred EecCHHHHHHHHHHHHhcCC-eEEEecCCcchHHHH
Confidence 0011224444455655554 678999999998754
No 194
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=93.57 E-value=0.057 Score=57.82 Aligned_cols=88 Identities=24% Similarity=0.281 Sum_probs=57.7
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC-----------------CCCcee
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS-----------------HSGETA 234 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~-----------------~~~KP~ 234 (283)
..|+.|++.+.++.|++.|+++.++||-... .+...-++.|+.. .+ ++.+.+ -...-.
T Consensus 548 ~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~---tA~aIA~~lGI~~-~~-vi~G~el~~~~~~el~~~v~~~~VfAr~s 622 (903)
T PRK15122 548 LDPPKESAAPAIAALRENGVAVKVLTGDNPI---VTAKICREVGLEP-GE-PLLGTEIEAMDDAALAREVEERTVFAKLT 622 (903)
T ss_pred cCccHHHHHHHHHHHHHCCCeEEEECCCCHH---HHHHHHHHcCCCC-CC-ccchHhhhhCCHHHHHHHhhhCCEEEEeC
Confidence 4689999999999999999999999997633 3333445568752 11 111111 000112
Q ss_pred EEeechhhhHhhhhCceEeccCccchhhhcc
Q 023352 235 VVYKSSERKKLEMKGYRIIGNIGDQWSDLLG 265 (283)
Q Consensus 235 ~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~g 265 (283)
|+-|...-+.+++.|+ +++++||..||.-+
T Consensus 623 Pe~K~~iV~~Lq~~G~-vVamtGDGvNDaPA 652 (903)
T PRK15122 623 PLQKSRVLKALQANGH-TVGFLGDGINDAPA 652 (903)
T ss_pred HHHHHHHHHHHHhCCC-EEEEECCCchhHHH
Confidence 2335666667777665 68999999999653
No 195
>PLN02645 phosphoglycolate phosphatase
Probab=93.39 E-value=0.037 Score=51.77 Aligned_cols=90 Identities=17% Similarity=0.092 Sum_probs=50.7
Q ss_pred HHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccCC----CCceeEEeechhhhHhhhhCceEeccCc
Q 023352 182 LYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSH----SGETAVVYKSSERKKLEMKGYRIIGNIG 257 (283)
Q Consensus 182 Ll~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~~----~~KP~~~yK~~~r~~l~~~gy~iv~~IG 257 (283)
..+.|+.++-.++++||++.... ....+...|...++..+....+. -+||++.......+.+. ..-+.+++||
T Consensus 178 a~~~l~~~~g~~~i~tn~d~~~~--~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~-~~~~~~~~VG 254 (311)
T PLN02645 178 ATLCIRENPGCLFIATNRDAVTH--LTDAQEWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFG-IEKSQICMVG 254 (311)
T ss_pred HHHHHhcCCCCEEEEeCCCCCCC--CCCCCCccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcC-CCcccEEEEc
Confidence 34445443336899999884321 12233444665555545443331 25888744333333332 1234589999
Q ss_pred cch-hhhccC-ccCCcccc
Q 023352 258 DQW-SDLLGT-NAGNRTFK 274 (283)
Q Consensus 258 Dq~-sDl~ga-~ag~r~fk 274 (283)
|++ +|+.++ .+|.+++.
T Consensus 255 D~~~~Di~~A~~aG~~~il 273 (311)
T PLN02645 255 DRLDTDILFGQNGGCKTLL 273 (311)
T ss_pred CCcHHHHHHHHHcCCCEEE
Confidence 998 999998 56766543
No 196
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=93.01 E-value=0.047 Score=59.32 Aligned_cols=90 Identities=22% Similarity=0.231 Sum_probs=56.9
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhh----------hhhhhcccCCC-----------
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTW----------EKLILKGSSHS----------- 230 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~----------~~lilr~~~~~----------- 230 (283)
..|+.|++.+.++.|++.|+++.++||.... .+...-++.|+..- ...++.+..-.
T Consensus 644 ~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~---tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~ 720 (1053)
T TIGR01523 644 YDPPRNESAGAVEKCHQAGINVHMLTGDFPE---TAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLK 720 (1053)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEECCCCHH---HHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHh
Confidence 4689999999999999999999999998843 33334455676421 01122211100
Q ss_pred ------CceeEEeechhhhHhhhhCceEeccCccchhhhcc
Q 023352 231 ------GETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLG 265 (283)
Q Consensus 231 ------~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~g 265 (283)
..-.|.-|...-+.+++.|+ +++++||..+|.-+
T Consensus 721 ~~~~V~ar~sP~~K~~iV~~lq~~g~-~Vam~GDGvNDapa 760 (1053)
T TIGR01523 721 ALCLVIARCAPQTKVKMIEALHRRKA-FCAMTGDGVNDSPS 760 (1053)
T ss_pred hcCeEEEecCHHHHHHHHHHHHhcCC-eeEEeCCCcchHHH
Confidence 00112235555666666665 67899999999653
No 197
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=92.73 E-value=0.18 Score=53.29 Aligned_cols=99 Identities=18% Similarity=0.297 Sum_probs=69.6
Q ss_pred CCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccH
Q 023352 129 DGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTE 208 (283)
Q Consensus 129 ~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~ 208 (283)
.|.-++.+=+||++.--. .-.++..|++...++.|++.|++++++||-... ...
T Consensus 701 ~g~tvv~v~vn~~l~gv~-----------------------~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~---aA~ 754 (951)
T KOG0207|consen 701 KGQTVVYVAVNGQLVGVF-----------------------ALEDQVRPDAALAVAELKSMGIKVVMLTGDNDA---AAR 754 (951)
T ss_pred cCceEEEEEECCEEEEEE-----------------------EeccccchhHHHHHHHHHhcCceEEEEcCCCHH---HHH
Confidence 467788888999886421 114678999999999999999999999997733 333
Q ss_pred hhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCceEeccCccchhhhc
Q 023352 209 ANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLL 264 (283)
Q Consensus 209 ~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~ 264 (283)
..-++.|+.. ++ .+. + |.-|...-+++++++ ..+++|||..||--
T Consensus 755 svA~~VGi~~---V~--aev---~--P~~K~~~Ik~lq~~~-~~VaMVGDGINDaP 799 (951)
T KOG0207|consen 755 SVAQQVGIDN---VY--AEV---L--PEQKAEKIKEIQKNG-GPVAMVGDGINDAP 799 (951)
T ss_pred HHHHhhCcce---EE--ecc---C--chhhHHHHHHHHhcC-CcEEEEeCCCCccH
Confidence 3445567543 11 111 1 233577788888766 56899999999754
No 198
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=92.60 E-value=0.074 Score=48.14 Aligned_cols=94 Identities=15% Similarity=0.084 Sum_probs=49.0
Q ss_pred hhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhh--hhccchh-hhhhhhcccCCCCceeEEeechhhhHhhhhCceEe
Q 023352 177 PESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANL--KHAGFDT-WEKLILKGSSHSGETAVVYKSSERKKLEMKGYRII 253 (283)
Q Consensus 177 pga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L--~~~G~~~-~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~iv 253 (283)
+.....+..| ++|.+ +++||.+..... ...+ ..-++-. ++...-+.....+||++.........+. .....+
T Consensus 124 ~~l~~a~~~l-~~g~~-~i~tN~D~~~~~--~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~-~~~~~~ 198 (249)
T TIGR01457 124 EKFATATLAI-RKGAH-FIGTNGDLAIPT--ERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLG-TEREET 198 (249)
T ss_pred HHHHHHHHHH-HCCCe-EEEECCCCCCCC--CCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcC-CCcccE
Confidence 3334445555 45777 888998743321 1111 1112211 1111112223467888754433333332 123568
Q ss_pred ccCccch-hhhccC-ccCCccccC
Q 023352 254 GNIGDQW-SDLLGT-NAGNRTFKL 275 (283)
Q Consensus 254 ~~IGDq~-sDl~ga-~ag~r~fkL 275 (283)
++|||+. +|+.++ .+|.+++.+
T Consensus 199 ~~VGD~~~~Di~~a~~~G~~~v~v 222 (249)
T TIGR01457 199 LMVGDNYLTDIRAGIDAGIDTLLV 222 (249)
T ss_pred EEECCCchhhHHHHHHcCCcEEEE
Confidence 9999996 899998 567776544
No 199
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=91.43 E-value=0.31 Score=46.66 Aligned_cols=92 Identities=20% Similarity=0.254 Sum_probs=52.9
Q ss_pred CChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC------CCCc----------------
Q 023352 175 PLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS------HSGE---------------- 232 (283)
Q Consensus 175 ~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~------~~~K---------------- 232 (283)
--|....++++|+++|.+++++||.|....+.-...|--......+++++-... +.++
T Consensus 241 r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdk 320 (510)
T KOG2470|consen 241 RNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDK 320 (510)
T ss_pred ccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhh
Confidence 346888999999999999999999996443333333322222222333321110 1111
Q ss_pred -----eeEEeechhhhHhhh-hCce--EeccCccch-hhhccC
Q 023352 233 -----TAVVYKSSERKKLEM-KGYR--IIGNIGDQW-SDLLGT 266 (283)
Q Consensus 233 -----P~~~yK~~~r~~l~~-~gy~--iv~~IGDq~-sDl~ga 266 (283)
+..+|+.+......+ .|++ -++++||.. ||+.+-
T Consensus 321 v~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~ 363 (510)
T KOG2470|consen 321 VDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADL 363 (510)
T ss_pred hhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhh
Confidence 233566554433332 2333 478999999 898765
No 200
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=90.56 E-value=0.26 Score=49.02 Aligned_cols=78 Identities=21% Similarity=0.237 Sum_probs=54.3
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCce
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYR 251 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~ 251 (283)
..++.|++.+.++.|++.|+++.++||..+....... ++.|+. .. -.|..|...-+++++.|+
T Consensus 345 ~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia---~~lgi~-------~~------~~p~~K~~~v~~l~~~g~- 407 (499)
T TIGR01494 345 EDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIA---KELGIF-------AR------VTPEEKAALVEALQKKGR- 407 (499)
T ss_pred cCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH---HHcCce-------ec------cCHHHHHHHHHHHHHCCC-
Confidence 4689999999999999999999999998854333333 334541 00 123345555566666664
Q ss_pred EeccCccchhhhccC
Q 023352 252 IIGNIGDQWSDLLGT 266 (283)
Q Consensus 252 iv~~IGDq~sDl~ga 266 (283)
.+.++||..+|...-
T Consensus 408 ~v~~vGDg~nD~~al 422 (499)
T TIGR01494 408 VVAMTGDGVNDAPAL 422 (499)
T ss_pred EEEEECCChhhHHHH
Confidence 479999999998643
No 201
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=90.27 E-value=2.1 Score=42.72 Aligned_cols=66 Identities=18% Similarity=0.290 Sum_probs=45.8
Q ss_pred cCCCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcc
Q 023352 127 AGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPED 202 (283)
Q Consensus 127 ~~~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~ 202 (283)
.+..+++.|+|+|+||.-.. ..+.+..+...+ ..++.+++..-.++++.|+++|+-++++|-..+.
T Consensus 218 ~g~~kK~LVLDLDNTLWGGV--IGedGv~GI~Ls--------~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~ 283 (574)
T COG3882 218 SGKSKKALVLDLDNTLWGGV--IGEDGVDGIRLS--------NSAEGEAFKTFQNFIKGLKKQGVLLAVCSKNTEK 283 (574)
T ss_pred hCcccceEEEecCCcccccc--cccccccceeec--------CCCCchhHHHHHHHHHHHHhccEEEEEecCCchh
Confidence 46678999999999997532 111111111111 1235678888999999999999999999987743
No 202
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=89.56 E-value=0.18 Score=45.20 Aligned_cols=90 Identities=22% Similarity=0.161 Sum_probs=46.3
Q ss_pred HHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhccc----CCCCceeEEeechhhhHhhhhCceEeccCccc
Q 023352 184 KKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGS----SHSGETAVVYKSSERKKLEMKGYRIIGNIGDQ 259 (283)
Q Consensus 184 ~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~----~~~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq 259 (283)
..+.++|-..+++||.+...+. ..-....|...+...+.... ...+||++.......+.+....-+.+++|||+
T Consensus 138 ~~~l~~~~~~~i~tN~d~~~~~--~~g~~~~~~g~~~~~i~~~~g~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~ 215 (236)
T TIGR01460 138 AYLLAEGDVPFIAANRDDLVRL--GDGRFRPGAGAIAAGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRDVMVGDN 215 (236)
T ss_pred HHHHhCCCCeEEEECCCCCCCC--CCCcEeecchHHHHHHHHHhCceeeeecCCCHHHHHHHHHHhCCCCccceEEECCC
Confidence 3334456457788997742221 11122334444333332211 12567777444333333321112335899999
Q ss_pred h-hhhccC-ccCCccccC
Q 023352 260 W-SDLLGT-NAGNRTFKL 275 (283)
Q Consensus 260 ~-sDl~ga-~ag~r~fkL 275 (283)
. +|+.++ .+|.+++.+
T Consensus 216 ~~~Di~~A~~~G~~~i~v 233 (236)
T TIGR01460 216 LRTDILGAKNAGFDTLLV 233 (236)
T ss_pred cHHHHHHHHHCCCcEEEE
Confidence 8 899998 557666543
No 203
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=89.18 E-value=0.041 Score=40.32 Aligned_cols=44 Identities=20% Similarity=0.189 Sum_probs=26.8
Q ss_pred CceeEEeechhhhHhhhhCceEeccCccc-hhhhccC-ccCCccccC
Q 023352 231 GETAVVYKSSERKKLEMKGYRIIGNIGDQ-WSDLLGT-NAGNRTFKL 275 (283)
Q Consensus 231 ~KP~~~yK~~~r~~l~~~gy~iv~~IGDq-~sDl~ga-~ag~r~fkL 275 (283)
+||.+.......+.+.- .-.-+++|||+ .+|+.++ .+|.+++.+
T Consensus 3 gKP~p~~~~~a~~~~~~-~~~~~~~VGD~~~~Di~~a~~~G~~~ilV 48 (75)
T PF13242_consen 3 GKPSPGMLEQALKRLGV-DPSRCVMVGDSLETDIEAAKAAGIDTILV 48 (75)
T ss_dssp STTSHHHHHHHHHHHTS-GGGGEEEEESSTTTHHHHHHHTTSEEEEE
T ss_pred CCCcHHHHHHHHHHcCC-CHHHEEEEcCCcHhHHHHHHHcCCcEEEE
Confidence 67777443333333321 12347999999 8999998 456665544
No 204
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=88.93 E-value=0.22 Score=53.48 Aligned_cols=90 Identities=21% Similarity=0.303 Sum_probs=58.6
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhh--hhhhcccCC------------CC-----c
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWE--KLILKGSSH------------SG-----E 232 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~--~lilr~~~~------------~~-----K 232 (283)
.+||.+++.+.++.|++.|+++..+||-.... ....=++.|+..-. .+++.+..- .. .
T Consensus 545 ~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~T---A~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfAR 621 (917)
T COG0474 545 EDPPREDVKEAIEELREAGIKVWMITGDHVET---AIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFAR 621 (917)
T ss_pred cCCCCccHHHHHHHHHHCCCcEEEECCCCHHH---HHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEE
Confidence 57999999999999999999999999976332 22233445655421 123322210 00 0
Q ss_pred eeEEeechhhhHhhhhCceEeccCccchhhhcc
Q 023352 233 TAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLG 265 (283)
Q Consensus 233 P~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~g 265 (283)
-.|+-|...-+.+++.|+ ++++.||..||.-+
T Consensus 622 vsP~qK~~IV~~lq~~g~-vVamtGDGvNDapA 653 (917)
T COG0474 622 VSPEQKARIVEALQKSGH-VVAMTGDGVNDAPA 653 (917)
T ss_pred cCHHHHHHHHHHHHhCCC-EEEEeCCCchhHHH
Confidence 122336666677777775 68999999999754
No 205
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=87.93 E-value=0.41 Score=52.22 Aligned_cols=30 Identities=27% Similarity=0.453 Sum_probs=27.9
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
+.|+.|++.+.++.|++.|+++.++||...
T Consensus 654 ~d~lr~~~~~~I~~l~~agi~v~miTGD~~ 683 (1054)
T TIGR01657 654 ENPLKPDTKEVIKELKRASIRTVMITGDNP 683 (1054)
T ss_pred ecCCCccHHHHHHHHHHCCCeEEEECCCCH
Confidence 468999999999999999999999999874
No 206
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=87.92 E-value=0.6 Score=45.16 Aligned_cols=60 Identities=25% Similarity=0.271 Sum_probs=42.6
Q ss_pred CCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcc
Q 023352 129 DGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPED 202 (283)
Q Consensus 129 ~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~ 202 (283)
.+.+.+.||+||||++|.+-.. .+-++.+|. ...|.+..=++.|.+.|++++|-|+....
T Consensus 73 ~~~K~i~FD~dgtlI~t~sg~v------f~~~~~dw~--------~l~~~vp~Klktl~~~g~~l~iftnq~~i 132 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKSGKV------FPKGSMDWR--------ILFPEVPSKLKTLYQDGIKLFIFTNQNGI 132 (422)
T ss_pred CCcceEEEecCCceeecCCcce------eeccCccce--------eeccccchhhhhhccCCeEEEEEeccccc
Confidence 5677899999999999864111 112233333 45566667788999999999999998753
No 207
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=87.56 E-value=0.62 Score=49.14 Aligned_cols=89 Identities=22% Similarity=0.337 Sum_probs=59.9
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhh----hhhcccC-C----------CCc----
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEK----LILKGSS-H----------SGE---- 232 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~----lilr~~~-~----------~~K---- 232 (283)
..||.|++.+.++.+++.|+.|..+||-.... .+..-++.|+..... ..+++.. + ...
T Consensus 582 ~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~T---A~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vF 658 (972)
T KOG0202|consen 582 LDPPRPEVADAIELCRQAGIRVIMITGDNKET---AEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVF 658 (972)
T ss_pred cCCCchhHHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEE
Confidence 47999999999999999999999999987443 334445567765332 2222221 0 011
Q ss_pred --eeEEeechhhhHhhhhCceEeccCccchhhhc
Q 023352 233 --TAVVYKSSERKKLEMKGYRIIGNIGDQWSDLL 264 (283)
Q Consensus 233 --P~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~ 264 (283)
-.|..|...-+.|++.| +++++-||..+|--
T Consensus 659 aR~~P~HK~kIVeaLq~~g-eivAMTGDGVNDAp 691 (972)
T KOG0202|consen 659 ARAEPQHKLKIVEALQSRG-EVVAMTGDGVNDAP 691 (972)
T ss_pred EecCchhHHHHHHHHHhcC-CEEEecCCCccchh
Confidence 13344666666777655 68999999999864
No 208
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=82.22 E-value=0.24 Score=45.57 Aligned_cols=85 Identities=16% Similarity=0.134 Sum_probs=54.4
Q ss_pred cCCCceeEEEecccccccCCc---cccccCCCc-ccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcc
Q 023352 127 AGDGKNIWVFDIDETSLSNLP---YYAKNGFGV-KPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPED 202 (283)
Q Consensus 127 ~~~~~~avVFDIDgTLldn~~---y~~~~~~g~-~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~ 202 (283)
...+++.+|+|+||||..++- .....+|.. ..++ .....--....|++.+|+..+-+. +.+++-|+..+.
T Consensus 85 ~~~~kk~lVLDLDeTLvHss~~~~~~~~~d~~~~v~~~-----~~~~~~yV~kRP~vdeFL~~~s~~-~e~v~FTAs~~~ 158 (262)
T KOG1605|consen 85 ATVGRKTLVLDLDETLVHSSLNLKPIVNADFTVPVEID-----GHIHQVYVRKRPHVDEFLSRVSKW-YELVLFTASLEV 158 (262)
T ss_pred ccCCCceEEEeCCCcccccccccCCCCCcceeeeeeeC-----CcceEEEEEcCCCHHHHHHHhHHH-HHHHHHHhhhHH
Confidence 456899999999999887652 111111211 0011 000011134679999999988776 888888888888
Q ss_pred cccccHhhhhh-ccch
Q 023352 203 QRNVTEANLKH-AGFD 217 (283)
Q Consensus 203 ~r~~T~~~L~~-~G~~ 217 (283)
+.......|+. .|+-
T Consensus 159 Ya~~v~D~LD~~~~i~ 174 (262)
T KOG1605|consen 159 YADPLLDILDPDRKII 174 (262)
T ss_pred HHHHHHHHccCCCCee
Confidence 77778888876 5553
No 209
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=80.29 E-value=0.95 Score=38.57 Aligned_cols=18 Identities=17% Similarity=0.013 Sum_probs=15.5
Q ss_pred eeEEEecccccccCCccc
Q 023352 132 NIWVFDIDETSLSNLPYY 149 (283)
Q Consensus 132 ~avVFDIDgTLldn~~y~ 149 (283)
++|+||.||||+++.+.+
T Consensus 2 ~~i~fDktGTLt~~~~~v 19 (215)
T PF00702_consen 2 DAICFDKTGTLTQGKMSV 19 (215)
T ss_dssp SEEEEECCTTTBESHHEE
T ss_pred eEEEEecCCCcccCeEEE
Confidence 689999999999986655
No 210
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=79.11 E-value=1.1 Score=44.41 Aligned_cols=98 Identities=21% Similarity=0.316 Sum_probs=54.7
Q ss_pred ChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhc------cchhhhhhhhcccC----------------CCCc-
Q 023352 176 LPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHA------GFDTWEKLILKGSS----------------HSGE- 232 (283)
Q Consensus 176 ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~------G~~~~~~lilr~~~----------------~~~K- 232 (283)
-|....+|++|++.|.+++++||.+-...+...+.|-.- ....+|++++.+.. ..++
T Consensus 185 ~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g~l 264 (448)
T PF05761_consen 185 DPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETGKL 264 (448)
T ss_dssp -CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTSSE
T ss_pred CchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCCcc
Confidence 478889999999999999999999976666666666444 34445565553211 0111
Q ss_pred ----------eeEEeechhhhHhhh----hCceEeccCccch-hhhccC--ccCCcccc
Q 023352 233 ----------TAVVYKSSERKKLEM----KGYRIIGNIGDQW-SDLLGT--NAGNRTFK 274 (283)
Q Consensus 233 ----------P~~~yK~~~r~~l~~----~gy~iv~~IGDq~-sDl~ga--~ag~r~fk 274 (283)
+...|..+-...+.+ .|- .+++|||+. +|+... ..|=||+.
T Consensus 265 ~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~-~VLY~GDhi~~Di~~~k~~~gWrT~~ 322 (448)
T PF05761_consen 265 KWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGK-EVLYFGDHIYGDILKSKKRHGWRTAA 322 (448)
T ss_dssp ECS---SS--TC-EEEE--HHHHHHHCT--GG-GEEEEESSTTTTHHHHHHHH-SEEEE
T ss_pred ccccccccccCCCEeecCCHHHHHHHHccCCC-eEEEECCchhhhhhhhccccceEEEE
Confidence 122444333333322 233 479999999 899876 23555553
No 211
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=76.82 E-value=5.1 Score=35.74 Aligned_cols=44 Identities=27% Similarity=0.434 Sum_probs=31.7
Q ss_pred CceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCC
Q 023352 130 GKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRP 200 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~ 200 (283)
..-.+.||+||||.-. .....|.+.++|+.|+++ +.|.+|-+.+
T Consensus 10 ~~~l~lfdvdgtLt~~--------------------------r~~~~~e~~~~l~~lr~~-v~ig~VggsD 53 (252)
T KOG3189|consen 10 EETLCLFDVDGTLTPP--------------------------RQKVTPEMLEFLQKLRKK-VTIGFVGGSD 53 (252)
T ss_pred CceEEEEecCCccccc--------------------------cccCCHHHHHHHHHHhhh-eEEEEeecHH
Confidence 3456899999999743 245667788888886655 6777777765
No 212
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=74.46 E-value=0.98 Score=42.43 Aligned_cols=44 Identities=20% Similarity=0.199 Sum_probs=28.4
Q ss_pred CCceeEEeechhhhHhhhh------------CceEeccCccch-hhhccC-ccCCccc
Q 023352 230 SGETAVVYKSSERKKLEMK------------GYRIIGNIGDQW-SDLLGT-NAGNRTF 273 (283)
Q Consensus 230 ~~KP~~~yK~~~r~~l~~~------------gy~iv~~IGDq~-sDl~ga-~ag~r~f 273 (283)
-+||++.+....+..+.+. ..+.+++|||++ +||.|+ .+|..++
T Consensus 231 ~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~si 288 (321)
T TIGR01456 231 LGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSC 288 (321)
T ss_pred cCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEE
Confidence 4899886554433333211 124689999999 999998 4565543
No 213
>PF10307 DUF2410: Hypothetical protein (DUF2410); InterPro: IPR018812 This entry represents a family of proteins conserved in fungi whose function is not known. There are two characteristic sequence motifs, GGWW and TGR.
Probab=72.99 E-value=3.3 Score=36.59 Aligned_cols=89 Identities=19% Similarity=0.141 Sum_probs=62.9
Q ss_pred CChhhHHHHHH-HHHcCeEEEEEeCCCc-ccccccHhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhh--hCc
Q 023352 175 PLPESLKLYKK-LLLLGIKIVFLTGRPE-DQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEM--KGY 250 (283)
Q Consensus 175 ~ipga~eLl~~-L~~~GikI~ivTgR~e-~~r~~T~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~--~gy 250 (283)
....++++.+. .++..--.+++|||.+ ...+...+.|...|+.. +.++|++.+....+...||......+.. ...
T Consensus 55 WNe~Iv~la~~S~~~~dtltVLLTGR~e~~F~~lI~~ml~s~~L~F-d~v~LKp~~~~~~sTm~fK~~~l~~ll~~Y~~~ 133 (197)
T PF10307_consen 55 WNENIVELARLSMQDPDTLTVLLTGRRESKFSSLIERMLASKGLEF-DAVCLKPENQRFSSTMDFKQAFLEDLLHTYKNA 133 (197)
T ss_pred hhHHHHHHHHHhhcCCCeeEEEEeCCCchhHHHHHHHHHhcCCCCc-cEEEeCcccccCccccHHHHHHHHHHHHhcCCC
Confidence 34567777664 4455677789999997 55777778888889873 6788888744455667899888777774 223
Q ss_pred eEeccCccchhhhc
Q 023352 251 RIIGNIGDQWSDLL 264 (283)
Q Consensus 251 ~iv~~IGDq~sDl~ 264 (283)
+.+-+.+|+..=+.
T Consensus 134 ~eI~IYeDR~~hvk 147 (197)
T PF10307_consen 134 EEIRIYEDRPKHVK 147 (197)
T ss_pred CEEEEEcCCHHHHH
Confidence 45778899885433
No 214
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=72.50 E-value=5.5 Score=32.99 Aligned_cols=65 Identities=14% Similarity=0.187 Sum_probs=42.5
Q ss_pred CceeEEEecccccccCCccccccC--CCcccCC-chhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 130 GKNIWVFDIDETSLSNLPYYAKNG--FGVKPYN-PTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y~~~~~--~g~~~~~-~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
.++++.||+|=|++- .+...+ +.-.||- ... -...+..-++.+...|..|+++|++++++|+...
T Consensus 4 ~p~~~~fdldytiwP---~~vdthl~~pfkP~k~~~g----~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~a 71 (144)
T KOG4549|consen 4 KPEAMQFDLDYTIWP---RLVDTHLDYPFKPFKCECG----SKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMA 71 (144)
T ss_pred CCceeEEeccceeee---EEEEecccccccccccCcc----cCcceeeeccchhHHHHHHHhcCcEEEEecCCCC
Confidence 578999999999863 332211 1111211 100 1112345789999999999999999999998874
No 215
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=72.17 E-value=4.8 Score=40.70 Aligned_cols=78 Identities=26% Similarity=0.356 Sum_probs=52.8
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhh-hhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANL-KHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGY 250 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L-~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy 250 (283)
+....||.+|=+.+|++.|++-+.+||-++ .|.... +++|.+.+ +... .|+-|....++-+.+|
T Consensus 445 kDivK~Gi~ERf~elR~MgIkTvM~TGDN~----~TAa~IA~EAGVDdf----iAea------tPEdK~~~I~~eQ~~g- 509 (681)
T COG2216 445 KDIVKPGIKERFAELRKMGIKTVMITGDNP----LTAAAIAAEAGVDDF----IAEA------TPEDKLALIRQEQAEG- 509 (681)
T ss_pred hhhcchhHHHHHHHHHhcCCeEEEEeCCCH----HHHHHHHHHhCchhh----hhcC------ChHHHHHHHHHHHhcC-
Confidence 355679999999999999999999999773 455544 56788762 2221 1223433333333334
Q ss_pred eEeccCccchhhhc
Q 023352 251 RIIGNIGDQWSDLL 264 (283)
Q Consensus 251 ~iv~~IGDq~sDl~ 264 (283)
+.+.+.||.-+|--
T Consensus 510 rlVAMtGDGTNDAP 523 (681)
T COG2216 510 RLVAMTGDGTNDAP 523 (681)
T ss_pred cEEEEcCCCCCcch
Confidence 68999999998864
No 216
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=69.55 E-value=2 Score=33.78 Aligned_cols=72 Identities=17% Similarity=0.149 Sum_probs=46.3
Q ss_pred EEEEEeCCCcccccccHhhhhhccchhhhhhhhcccCC----CCceeE-EeechhhhHhhh-hCceEeccCccch-hhhc
Q 023352 192 KIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSH----SGETAV-VYKSSERKKLEM-KGYRIIGNIGDQW-SDLL 264 (283)
Q Consensus 192 kI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~~----~~KP~~-~yK~~~r~~l~~-~gy~iv~~IGDq~-sDl~ 264 (283)
++++||+++........+-|+..|||. -.+++++-+. .-++.. .+|.....++.+ -.....+.|||+- .|..
T Consensus 1 pf~YvS~SPwnly~~l~~Fl~~~~~P~-G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~Dpe 79 (100)
T PF09949_consen 1 PFFYVSNSPWNLYPFLRDFLRRNGFPA-GPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPE 79 (100)
T ss_pred CEEEEcCCHHHHHHHHHHHHHhcCCCC-CceEcccCCccccccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHH
Confidence 478999999877878888899999997 5577776521 111222 366444444433 2334578899986 6654
No 217
>PRK10444 UMP phosphatase; Provisional
Probab=67.81 E-value=1.5 Score=39.78 Aligned_cols=46 Identities=20% Similarity=0.221 Sum_probs=29.1
Q ss_pred CCCceeEEeechhhhHhhhhCceEeccCccch-hhhccC-ccCCccccC
Q 023352 229 HSGETAVVYKSSERKKLEMKGYRIIGNIGDQW-SDLLGT-NAGNRTFKL 275 (283)
Q Consensus 229 ~~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~-sDl~ga-~ag~r~fkL 275 (283)
..+||++.+.....+.+. ...+.+++|||+. +|+.++ .+|.+++.+
T Consensus 171 ~~gKP~~~~~~~~~~~~~-~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV 218 (248)
T PRK10444 171 YVGKPSPWIIRAALNKMQ-AHSEETVIVGDNLRTDILAGFQAGLETILV 218 (248)
T ss_pred ccCCCCHHHHHHHHHHcC-CCcccEEEECCCcHHHHHHHHHcCCCEEEE
Confidence 457887754433333332 1234589999997 899998 557666544
No 218
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=66.27 E-value=7.3 Score=33.35 Aligned_cols=15 Identities=27% Similarity=0.291 Sum_probs=13.1
Q ss_pred CceeEEEeccccccc
Q 023352 130 GKNIWVFDIDETSLS 144 (283)
Q Consensus 130 ~~~avVFDIDgTLld 144 (283)
+.+|+|||=|.++.-
T Consensus 42 ~ikavVlDKDNcit~ 56 (190)
T KOG2961|consen 42 GIKAVVLDKDNCITA 56 (190)
T ss_pred CceEEEEcCCCeeeC
Confidence 678999999999874
No 219
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate. XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.
Probab=65.96 E-value=20 Score=33.64 Aligned_cols=25 Identities=8% Similarity=0.215 Sum_probs=20.9
Q ss_pred CCChhhHHHHHHHHHcCeEEEEEeC
Q 023352 174 PPLPESLKLYKKLLLLGIKIVFLTG 198 (283)
Q Consensus 174 ~~ipga~eLl~~L~~~GikI~ivTg 198 (283)
..+|...+++++|+++|+++++...
T Consensus 63 ~~FPdp~~mi~~L~~~G~kv~~~i~ 87 (319)
T cd06591 63 ERFPDPKAMVRELHEMNAELMISIW 87 (319)
T ss_pred hhCCCHHHHHHHHHHCCCEEEEEec
Confidence 3567889999999999999987654
No 220
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=64.33 E-value=6.6 Score=33.19 Aligned_cols=54 Identities=15% Similarity=0.212 Sum_probs=35.9
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCc--ccccccHhhhhh-ccchhhhhhhhcc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPE--DQRNVTEANLKH-AGFDTWEKLILKG 226 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e--~~r~~T~~~L~~-~G~~~~~~lilr~ 226 (283)
.....|++.+.+++|.+. +.|+++|.... ..-+.--+||.. .-|-.+..+++.+
T Consensus 66 nL~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCg 122 (180)
T COG4502 66 NLGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCG 122 (180)
T ss_pred hcCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEec
Confidence 356789999999999876 88999998732 223344567754 3444455555544
No 221
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=63.41 E-value=8.3 Score=41.16 Aligned_cols=91 Identities=22% Similarity=0.190 Sum_probs=55.7
Q ss_pred CCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhh--hhhcccCC-----------------CC
Q 023352 171 GKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEK--LILKGSSH-----------------SG 231 (283)
Q Consensus 171 ~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~--lilr~~~~-----------------~~ 231 (283)
-+.|..||+.+.++.++..|++|-.+||-.-... ...-.+-|+-.... +.+-+... -.
T Consensus 644 IkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TA---kAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlA 720 (1034)
T KOG0204|consen 644 IKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTA---KAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLA 720 (1034)
T ss_pred ccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHH---HHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeee
Confidence 3679999999999999999999999999773222 22223345532111 22211110 01
Q ss_pred ceeEEeechhhhHhhhhCceEeccCccchhhhcc
Q 023352 232 ETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLG 265 (283)
Q Consensus 232 KP~~~yK~~~r~~l~~~gy~iv~~IGDq~sDl~g 265 (283)
.+.|.-|...-+.|++.| +++++-||.-+|--+
T Consensus 721 RSSP~DK~lLVk~L~~~g-~VVAVTGDGTNDaPA 753 (1034)
T KOG0204|consen 721 RSSPNDKHLLVKGLIKQG-EVVAVTGDGTNDAPA 753 (1034)
T ss_pred cCCCchHHHHHHHHHhcC-cEEEEecCCCCCchh
Confidence 123344555556666555 578999999988643
No 222
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=63.00 E-value=3.7 Score=36.73 Aligned_cols=88 Identities=11% Similarity=0.236 Sum_probs=44.0
Q ss_pred CCChhhHHHHHHHHHcCeEEEEEeCCCc--ccccccHhhhhhccchh---hhh-hhhcccCCCCceeEEeechhhhHhhh
Q 023352 174 PPLPESLKLYKKLLLLGIKIVFLTGRPE--DQRNVTEANLKHAGFDT---WEK-LILKGSSHSGETAVVYKSSERKKLEM 247 (283)
Q Consensus 174 ~~ipga~eLl~~L~~~GikI~ivTgR~e--~~r~~T~~~L~~~G~~~---~~~-lilr~~~~~~KP~~~yK~~~r~~l~~ 247 (283)
+.++++.++++.++..+..+.++|+.++ ..+......++..|+.. +.. +-+.+.+ ..|+ ...+.-++.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~-~~K~-----~~l~~l~~~ 210 (272)
T PRK10530 137 PTFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKG-NSKG-----KRLTQWVEA 210 (272)
T ss_pred cceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCC-CChH-----HHHHHHHHH
Confidence 3466777888887777766666776542 11222333333344321 000 0011111 1121 223333333
Q ss_pred hCc--eEeccCccchhhhccCc
Q 023352 248 KGY--RIIGNIGDQWSDLLGTN 267 (283)
Q Consensus 248 ~gy--~iv~~IGDq~sDl~ga~ 267 (283)
.|. ..+++|||+.+|+....
T Consensus 211 ~gi~~~e~i~~GD~~NDi~m~~ 232 (272)
T PRK10530 211 QGWSMKNVVAFGDNFNDISMLE 232 (272)
T ss_pred cCCCHHHeEEeCCChhhHHHHH
Confidence 343 35899999999998763
No 223
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=57.62 E-value=45 Score=32.53 Aligned_cols=49 Identities=27% Similarity=0.351 Sum_probs=33.0
Q ss_pred CceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcc
Q 023352 130 GKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPED 202 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~ 202 (283)
+.+-|-||=|+||.+--. .+. ...|.+|-.+ .|.++|++|.|||.--..
T Consensus 146 ~L~LvTFDgDvTLY~DG~----------sl~----------~d~pvi~~ii----~LL~~gv~VgIVTAAGY~ 194 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYEDGA----------SLE----------PDNPVIPRII----KLLRRGVKVGIVTAAGYP 194 (408)
T ss_pred CceEEEEcCCcccccCCC----------CCC----------CCchHHHHHH----HHHhcCCeEEEEeCCCCC
Confidence 678899999999987421 111 1234444444 455789999999997644
No 224
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=57.21 E-value=2.1 Score=39.66 Aligned_cols=44 Identities=25% Similarity=0.363 Sum_probs=27.5
Q ss_pred CCCceeEEeechhhhHhhhhCceEeccCccch-hhhccC-ccCCccc
Q 023352 229 HSGETAVVYKSSERKKLEMKGYRIIGNIGDQW-SDLLGT-NAGNRTF 273 (283)
Q Consensus 229 ~~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~-sDl~ga-~ag~r~f 273 (283)
.-+||.+.........+... -..+++|||+. +|+.++ .+|+.++
T Consensus 187 ~~GKP~~~i~~~al~~~~~~-~~~~~mVGD~~~TDI~~a~~~G~~t~ 232 (269)
T COG0647 187 VIGKPSPAIYEAALEKLGLD-RSEVLMVGDRLDTDILGAKAAGLDTL 232 (269)
T ss_pred ccCCCCHHHHHHHHHHhCCC-cccEEEEcCCchhhHHHHHHcCCCEE
Confidence 36788775443333333321 13678999999 999998 4565543
No 225
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=55.49 E-value=33 Score=31.75 Aligned_cols=70 Identities=19% Similarity=0.212 Sum_probs=39.9
Q ss_pred HHHHhhhhhccCCCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEE
Q 023352 117 AILYAQSLKLAGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFL 196 (283)
Q Consensus 117 a~~y~~~~~~~~~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~iv 196 (283)
...+++.++..+=..+++++|+|=..-...+.+ ..+++.-.+|+ ..+|...+++++|+++|+++++.
T Consensus 27 v~~v~~~~r~~~iP~D~i~lD~dw~~~~~~~~~-~~~~~~ft~d~------------~~FPdp~~mi~~Lh~~G~k~v~~ 93 (292)
T cd06595 27 YLALMDRFKKHNIPLDVLVIDMDWHVTDIPSKY-GSGWTGYSWNR------------KLFPDPEKLLQDLHDRGLKVTLN 93 (292)
T ss_pred HHHHHHHHHHhCCCccEEEEecccccccccccc-cCCcceeEECh------------hcCCCHHHHHHHHHHCCCEEEEE
Confidence 344445444444467899999972111100000 01112112222 35688899999999999999988
Q ss_pred eCC
Q 023352 197 TGR 199 (283)
Q Consensus 197 TgR 199 (283)
..-
T Consensus 94 v~P 96 (292)
T cd06595 94 LHP 96 (292)
T ss_pred eCC
Confidence 754
No 226
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=52.70 E-value=15 Score=34.63 Aligned_cols=91 Identities=16% Similarity=0.191 Sum_probs=43.9
Q ss_pred hhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhh----cccCCCCceeEEeechhhhHhhhhCceE
Q 023352 177 PESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLIL----KGSSHSGETAVVYKSSERKKLEMKGYRI 252 (283)
Q Consensus 177 pga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lil----r~~~~~~KP~~~yK~~~r~~l~~~gy~i 252 (283)
+-....+++|++-|. .+++||++...- . .....--|--.+...+. |.+..-+||.+........+-. .+-.-
T Consensus 168 ~KL~kA~~yLqnP~c-lflatn~D~~~p-~-~~~~~ipG~G~~v~av~~~t~R~P~v~GKP~~~m~~~l~~~~~-i~psR 243 (306)
T KOG2882|consen 168 PKLMKALNYLQNPGC-LFLATNRDATTP-P-TPGVEIPGAGSFVAAVKFATGRQPIVLGKPSTFMFEYLLEKFN-IDPSR 243 (306)
T ss_pred HHHHHHHHHhCCCCc-EEEeccCccccC-C-CCCeeccCCccHHHHHHHHhcCCCeecCCCCHHHHHHHHHHcC-CCcce
Confidence 344556788886665 668899885321 0 11111112222212111 2233456665532211111111 12334
Q ss_pred eccCccch-hhhccC-ccCCc
Q 023352 253 IGNIGDQW-SDLLGT-NAGNR 271 (283)
Q Consensus 253 v~~IGDq~-sDl~ga-~ag~r 271 (283)
+++|||+. +||+=+ +.|..
T Consensus 244 t~mvGDRL~TDIlFG~~~G~~ 264 (306)
T KOG2882|consen 244 TCMVGDRLDTDILFGKNCGFK 264 (306)
T ss_pred EEEEcccchhhhhHhhccCcc
Confidence 89999999 899744 43433
No 227
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=52.65 E-value=12 Score=34.13 Aligned_cols=56 Identities=18% Similarity=0.175 Sum_probs=39.2
Q ss_pred CCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccch
Q 023352 159 YNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFD 217 (283)
Q Consensus 159 ~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~ 217 (283)
++.....+-+........+|+.+|++.|.++++++.+.|+.- -+..+..|++.|..
T Consensus 75 l~k~~i~~~V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSAGl---gdvI~~vL~q~~~~ 130 (246)
T PF05822_consen 75 LTKSEIEEAVKESDIMLRDGVEEFFDKLEEHNIPLLIFSAGL---GDVIEEVLRQAGVF 130 (246)
T ss_dssp -BGGGHHHHHHCS---B-BTHHHHHHHHHCTT--EEEEEEEE---HHHHHHHHHHTT--
T ss_pred cCHHHHHHHHHhcchhhhcCHHHHHHHHHhcCCCEEEEeCCc---HHHHHHHHHHcCCC
Confidence 445566677777888999999999999999999999999976 56777788887643
No 228
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=50.56 E-value=9.5 Score=38.37 Aligned_cols=37 Identities=27% Similarity=0.410 Sum_probs=24.1
Q ss_pred CChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhh-ccchh
Q 023352 175 PLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKH-AGFDT 218 (283)
Q Consensus 175 ~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~-~G~~~ 218 (283)
..|.+.+ .+++.|.. +++|+.+ +...+.++++ +|+..
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp---~~~Vepfa~~~LGid~ 148 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASP---RIMVEPFVKTFLGADK 148 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCc---HHHHHHHHHHcCCCCE
Confidence 4455444 34567754 9999998 5566677765 68763
No 229
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=50.34 E-value=9.2 Score=38.19 Aligned_cols=95 Identities=17% Similarity=0.232 Sum_probs=58.8
Q ss_pred CCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhh-hhhhcccCCCCc-eeEEeechhhhHhhhhCce
Q 023352 174 PPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWE-KLILKGSSHSGE-TAVVYKSSERKKLEMKGYR 251 (283)
Q Consensus 174 ~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~-~lilr~~~~~~K-P~~~yK~~~r~~l~~~gy~ 251 (283)
-|.....+|++++.+.|.+|+++|.-.-. -+.....|...|+..+. .++++++.--.| +...||.-. +++.-.-.
T Consensus 99 ypn~~~~eL~e~ai~n~krVIlISDMYlp-s~Il~~~L~s~g~d~~nipiY~S~e~rl~KnSg~LFk~Vl--k~EnVd~~ 175 (635)
T COG5610 99 YPNKKNIELVEEAIKNEKRVILISDMYLP-SSILRTFLNSFGPDFNNIPIYMSSEFRLKKNSGNLFKAVL--KLENVDPK 175 (635)
T ss_pred eccccchHHHHHHHhCCCeEEEEecccCc-HHHHHHHHHhcCCCccCceeeecceeehhcccchHHHHHH--hhcCCChh
Confidence 45566779999999999999999986522 34556778888887653 256665432112 112333222 22222234
Q ss_pred EeccCccch-hhhccC-ccCCc
Q 023352 252 IIGNIGDQW-SDLLGT-NAGNR 271 (283)
Q Consensus 252 iv~~IGDq~-sDl~ga-~ag~r 271 (283)
.++.+||+| .|..-+ +.|+.
T Consensus 176 ~w~H~GDN~~aD~l~pk~LgI~ 197 (635)
T COG5610 176 KWIHCGDNWVADYLKPKNLGIS 197 (635)
T ss_pred heEEecCchhhhhcCccccchh
Confidence 589999999 666655 44543
No 230
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=48.80 E-value=24 Score=27.63 Aligned_cols=27 Identities=19% Similarity=0.102 Sum_probs=23.7
Q ss_pred CChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 175 PLPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 175 ~ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
--+.+++.++.++++|.+++.+|+.+.
T Consensus 58 ~t~e~~~~~~~a~~~g~~vi~iT~~~~ 84 (126)
T cd05008 58 ETADTLAALRLAKEKGAKTVAITNVVG 84 (126)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEECCCC
Confidence 346789999999999999999999874
No 231
>COG2044 Predicted peroxiredoxins [General function prediction only]
Probab=48.69 E-value=29 Score=28.32 Aligned_cols=53 Identities=21% Similarity=0.228 Sum_probs=39.2
Q ss_pred CceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 130 GKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
-.-.+.|=+||+-+-.- .+....+.+++|...++++.+++.|+++++++-.-+
T Consensus 34 ~dV~iF~t~dG~~l~~K-------------------~~~ekik~~~~~~l~~~~~~a~e~GVk~yvCe~s~~ 86 (120)
T COG2044 34 YDVTIFFTMDGVTLVKK-------------------KVAEKIKHPNFPPLEELIKQAIEAGVKIYVCEQSLK 86 (120)
T ss_pred CceEEEEEeccceeeee-------------------cchhhhcCCCCCCHHHHHHHHHHcCCEEEEEcchhh
Confidence 33457788999766431 122333458889999999999999999999987664
No 232
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=48.30 E-value=10 Score=38.10 Aligned_cols=33 Identities=27% Similarity=0.212 Sum_probs=26.2
Q ss_pred HHHHHHHcCeEEEEEeCCCcccccccHhhhhh-ccchh
Q 023352 182 LYKKLLLLGIKIVFLTGRPEDQRNVTEANLKH-AGFDT 218 (283)
Q Consensus 182 Ll~~L~~~GikI~ivTgR~e~~r~~T~~~L~~-~G~~~ 218 (283)
.++..++.| +++++|..+ |...+.+++. +|+..
T Consensus 101 ~~~~~~~~g-~~vVVTAsP---rvmVEpFake~LG~D~ 134 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTRMP---RVMVERFAKEHLRADE 134 (498)
T ss_pred HHHHHHcCC-eEEEEeCCH---HHHHHHHHHHhcCCce
Confidence 455667788 999999999 7778888888 77763
No 233
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=48.25 E-value=24 Score=27.63 Aligned_cols=28 Identities=32% Similarity=0.411 Sum_probs=24.6
Q ss_pred CCChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 174 PPLPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 174 ~~ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
---+.+.+.++.++++|.+++.+|+.+.
T Consensus 58 G~t~~~~~~~~~a~~~g~~vi~iT~~~~ 85 (128)
T cd05014 58 GETDELLNLLPHLKRRGAPIIAITGNPN 85 (128)
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 3557889999999999999999999874
No 234
>PF10137 TIR-like: Predicted nucleotide-binding protein containing TIR-like domain; InterPro: IPR019302 This entry represents a TIR-like domain found in a family of prokaryotic predicted nucleotide-binding proteins. Their exact function has not, as yet, been defined.
Probab=47.41 E-value=11 Score=30.72 Aligned_cols=27 Identities=22% Similarity=0.402 Sum_probs=19.9
Q ss_pred EEEEEeCCCcccccccHhhhhhccchh
Q 023352 192 KIVFLTGRPEDQRNVTEANLKHAGFDT 218 (283)
Q Consensus 192 kI~ivTgR~e~~r~~T~~~L~~~G~~~ 218 (283)
+|||++||....+......|++.|+..
T Consensus 1 kVFIvhg~~~~~~~~v~~~L~~~~~ep 27 (125)
T PF10137_consen 1 KVFIVHGRDLAAAEAVERFLEKLGLEP 27 (125)
T ss_pred CEEEEeCCCHHHHHHHHHHHHhCCCce
Confidence 478888877777777777777777754
No 235
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=46.41 E-value=23 Score=29.56 Aligned_cols=52 Identities=13% Similarity=0.091 Sum_probs=34.3
Q ss_pred eEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhh
Q 023352 133 IWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLK 212 (283)
Q Consensus 133 avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~ 212 (283)
..++|+||.+++... .--...-++++.+.+.|.++++.|.-... ..+.+.|.
T Consensus 45 iAildL~G~~l~l~S--------------------------~R~~~~~evi~~I~~~G~PviVAtDV~p~--P~~V~Kia 96 (138)
T PF04312_consen 45 IAILDLDGELLDLKS--------------------------SRNMSRSEVIEWISEYGKPVIVATDVSPP--PETVKKIA 96 (138)
T ss_pred EEEEecCCcEEEEEe--------------------------ecCCCHHHHHHHHHHcCCEEEEEecCCCC--cHHHHHHH
Confidence 468999999997421 01112346677888999999999997642 33444443
No 236
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=46.05 E-value=30 Score=26.92 Aligned_cols=27 Identities=19% Similarity=0.265 Sum_probs=23.5
Q ss_pred CChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 175 PLPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 175 ~ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
.-....+.++.++++|.+++.+|+..+
T Consensus 65 ~~~~~~~~~~~ak~~g~~vi~iT~~~~ 91 (131)
T PF01380_consen 65 ETRELIELLRFAKERGAPVILITSNSE 91 (131)
T ss_dssp TTHHHHHHHHHHHHTTSEEEEEESSTT
T ss_pred cchhhhhhhHHHHhcCCeEEEEeCCCC
Confidence 447788999999999999999998874
No 237
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=46.03 E-value=75 Score=29.98 Aligned_cols=29 Identities=14% Similarity=0.180 Sum_probs=25.0
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCC
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRP 200 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~ 200 (283)
+....|...++++.++++|+.+++.||..
T Consensus 140 EPlL~p~l~eli~~~k~~Gi~~~L~TNG~ 168 (322)
T PRK13762 140 EPTLYPYLPELIEEFHKRGFTTFLVTNGT 168 (322)
T ss_pred cccchhhHHHHHHHHHHcCCCEEEECCCC
Confidence 34456789999999999999999999986
No 238
>COG1222 RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones]
Probab=45.63 E-value=23 Score=34.45 Aligned_cols=71 Identities=23% Similarity=0.361 Sum_probs=40.1
Q ss_pred hhhhHhHHHHHHhhhhhccCCCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHH-
Q 023352 109 DSEVVANEAILYAQSLKLAGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLL- 187 (283)
Q Consensus 109 D~~~v~~~a~~y~~~~~~~~~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~- 187 (283)
+...++.+.+.+|+. +.+.||| ||+ +|. .|...|+... .+....---+++||++|-
T Consensus 228 EGaRlVRelF~lAre------kaPsIIF-iDE--IDA--------Ig~kR~d~~t------~gDrEVQRTmleLL~qlDG 284 (406)
T COG1222 228 EGARLVRELFELARE------KAPSIIF-IDE--IDA--------IGAKRFDSGT------SGDREVQRTMLELLNQLDG 284 (406)
T ss_pred cchHHHHHHHHHHhh------cCCeEEE-Eec--hhh--------hhcccccCCC------CchHHHHHHHHHHHHhccC
Confidence 445567777777743 3345666 455 222 4444554321 111122234567777765
Q ss_pred ---HcCeEEEEEeCCCcc
Q 023352 188 ---LLGIKIVFLTGRPED 202 (283)
Q Consensus 188 ---~~GikI~ivTgR~e~ 202 (283)
..++||+..|||++.
T Consensus 285 FD~~~nvKVI~ATNR~D~ 302 (406)
T COG1222 285 FDPRGNVKVIMATNRPDI 302 (406)
T ss_pred CCCCCCeEEEEecCCccc
Confidence 457999999999853
No 239
>KOG1344 consensus Predicted histone deacetylase [Chromatin structure and dynamics]
Probab=44.08 E-value=79 Score=29.02 Aligned_cols=100 Identities=16% Similarity=0.220 Sum_probs=59.0
Q ss_pred hhhhhhhhccccccccchhhhHhHHHHHHhhhhhccCCCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcC
Q 023352 92 KCAGYVGHYMLGQQYRMDSEVVANEAILYAQSLKLAGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTG 171 (283)
Q Consensus 92 ~c~~~v~~y~~~~~Y~~D~~~v~~~a~~y~~~~~~~~~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~ 171 (283)
.|+-.++.|.+.+.|.+.++.-.+++.+-. .|+.||..----+++..| .|....+++
T Consensus 218 r~kVEl~~gTeddeYLrkl~r~l~~sl~ef--------~Pd~VvYNAGTDiLeGDp------LG~L~ISp~--------- 274 (324)
T KOG1344|consen 218 RCKVELRNGTEDDEYLRKLKRCLMQSLAEF--------RPDMVVYNAGTDILEGDP------LGNLAISPE--------- 274 (324)
T ss_pred hheeeeecCCCchHHHHHHHHHHHHHHHhh--------CCcEEEEeCCCccccCCC------CCCeeeccc---------
Confidence 677778888888999888887777665332 345666554333444433 232222221
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCccc-----ccccHhhhhhccc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQ-----RNVTEANLKHAGF 216 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~-----r~~T~~~L~~~G~ 216 (283)
-.+.--.-.++..+.+|++++.+|+.-.-. -.....||..+|+
T Consensus 275 --Gi~~RDelVFr~~R~~~iPvvMltSGGY~K~sArvIaDSI~NL~~qGL 322 (324)
T KOG1344|consen 275 --GIIERDELVFRTFRALGIPVVMLTSGGYLKASARVIADSIVNLRLQGL 322 (324)
T ss_pred --ccchhhHHHHHHHHHcCCcEEEEecCceehhhhhhhHHHHHhHhhhcc
Confidence 122233346788999999999999865321 1223456665554
No 240
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=43.93 E-value=30 Score=26.94 Aligned_cols=25 Identities=16% Similarity=0.191 Sum_probs=22.5
Q ss_pred hhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 177 PESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 177 pga~eLl~~L~~~GikI~ivTgR~e 201 (283)
+.+.++++.++++|.+++.+|+..+
T Consensus 74 ~~~~~~~~~a~~~g~~iv~iT~~~~ 98 (139)
T cd05013 74 KETVEAAEIAKERGAKVIAITDSAN 98 (139)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCC
Confidence 6788999999999999999999874
No 241
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.
Probab=43.73 E-value=45 Score=31.49 Aligned_cols=25 Identities=28% Similarity=0.405 Sum_probs=21.1
Q ss_pred CCChhhHHHHHHHHHcCeEEEEEeC
Q 023352 174 PPLPESLKLYKKLLLLGIKIVFLTG 198 (283)
Q Consensus 174 ~~ipga~eLl~~L~~~GikI~ivTg 198 (283)
..+|...++++.|+++|+++++...
T Consensus 61 ~~FPdp~~mi~~L~~~G~k~~~~~~ 85 (339)
T cd06603 61 KKFPDPEKMQEKLASKGRKLVTIVD 85 (339)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEec
Confidence 3567889999999999999988765
No 242
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=42.92 E-value=12 Score=32.41 Aligned_cols=26 Identities=15% Similarity=0.105 Sum_probs=18.2
Q ss_pred EeccCccchhhhccCccCCccccCCC
Q 023352 252 IIGNIGDQWSDLLGTNAGNRTFKLPD 277 (283)
Q Consensus 252 iv~~IGDq~sDl~ga~ag~r~fkLPN 277 (283)
.+++|||+.+|+.........|.+.|
T Consensus 165 ~~i~iGDs~ND~~ml~~ag~~vam~n 190 (215)
T TIGR01487 165 EVAAIGDSENDIDLFRVVGFKVAVAN 190 (215)
T ss_pred HEEEECCCHHHHHHHHhCCCeEEcCC
Confidence 47899999999987744334454444
No 243
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=42.85 E-value=34 Score=27.05 Aligned_cols=27 Identities=19% Similarity=0.094 Sum_probs=23.8
Q ss_pred CChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 175 PLPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 175 ~ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
--+.+.+.++.++++|.+++.+|+.++
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~ 85 (120)
T cd05710 59 NTKETVAAAKFAKEKGATVIGLTDDED 85 (120)
T ss_pred CChHHHHHHHHHHHcCCeEEEEECCCC
Confidence 457788999999999999999999874
No 244
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=42.50 E-value=29 Score=32.62 Aligned_cols=30 Identities=17% Similarity=0.239 Sum_probs=27.1
Q ss_pred CCCCCChhhHHHHHHHHHcC-eEEEEEeCCC
Q 023352 171 GKAPPLPESLKLYKKLLLLG-IKIVFLTGRP 200 (283)
Q Consensus 171 ~~~~~ipga~eLl~~L~~~G-ikI~ivTgR~ 200 (283)
|+....|..-++++.+++.| +++++|||..
T Consensus 89 GEPTLy~~L~elI~~~k~~g~~~tflvTNgs 119 (296)
T COG0731 89 GEPTLYPNLGELIEEIKKRGKKTTFLVTNGS 119 (296)
T ss_pred CCcccccCHHHHHHHHHhcCCceEEEEeCCC
Confidence 45678899999999999999 7999999988
No 245
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end. GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes.
Probab=41.85 E-value=61 Score=30.79 Aligned_cols=25 Identities=16% Similarity=0.223 Sum_probs=21.2
Q ss_pred CCChhhHHHHHHHHHcCeEEEEEeC
Q 023352 174 PPLPESLKLYKKLLLLGIKIVFLTG 198 (283)
Q Consensus 174 ~~ipga~eLl~~L~~~GikI~ivTg 198 (283)
..+|...+++++|+++|++++++..
T Consensus 61 ~~FPdp~~mv~~L~~~G~klv~~i~ 85 (332)
T cd06601 61 GGFPNPKEMFDNLHNKGLKCSTNIT 85 (332)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEec
Confidence 4568889999999999999988765
No 246
>cd06416 GH25_Lys1-like Lys-1 is a lysozyme encoded by the Caenorhabditis elegans lys-1 gene. This gene is one of a several lysozyme genes upregulated upon infection by the Gram-negative bacterial pathogen Serratia marcescens. Lys-1 contains a glycosyl hydrolase family 25 (GH25) catalytic domain. This family also includes Lys-5 from Caenorhabditis elegans.
Probab=41.26 E-value=52 Score=28.32 Aligned_cols=68 Identities=18% Similarity=0.153 Sum_probs=43.8
Q ss_pred hhHhHHHHHHhhhhhccCCCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcC
Q 023352 111 EVVANEAILYAQSLKLAGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLG 190 (283)
Q Consensus 111 ~~v~~~a~~y~~~~~~~~~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~G 190 (283)
....+||..+.+.++..+...+.+++||..+ .+. .+ -+. .....-+.++++.+++.|
T Consensus 67 ~~~~~Qa~~f~~~~~~~~~~~~~i~lDiE~~--~~~-------~~---~~~-----------~~~~~~~~~f~~~~~~~G 123 (196)
T cd06416 67 GSAAGQVQTFLQYLKANGIKYGTVWIDIEQN--PCQ-------WS---SDV-----------ASNCQFLQELVSAAKALG 123 (196)
T ss_pred CCHHHHHHHHHHHHHhCCCceeEEEEEEecC--CCC-------Cc---CCH-----------HHHHHHHHHHHHHHHHhC
Confidence 3466888888887765433445677999975 110 00 000 111234678889999889
Q ss_pred eEEEEEeCCCc
Q 023352 191 IKIVFLTGRPE 201 (283)
Q Consensus 191 ikI~ivTgR~e 201 (283)
.++.|-|+...
T Consensus 124 ~~~~iYt~~~~ 134 (196)
T cd06416 124 LKVGIYSSQYD 134 (196)
T ss_pred CeEEEEcCcch
Confidence 99999999874
No 247
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=41.09 E-value=34 Score=28.80 Aligned_cols=28 Identities=21% Similarity=0.255 Sum_probs=24.5
Q ss_pred CCChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 174 PPLPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 174 ~~ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
.--+.+.++++.++++|.+++.+|+.+.
T Consensus 83 G~t~~~i~~~~~ak~~g~~ii~IT~~~~ 110 (179)
T TIGR03127 83 GETESLVTVAKKAKEIGATVAAITTNPE 110 (179)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 3457889999999999999999999874
No 248
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=40.22 E-value=99 Score=33.40 Aligned_cols=31 Identities=26% Similarity=0.299 Sum_probs=26.9
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCcc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPED 202 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e~ 202 (283)
-.||.+.+.+....+++.|++++.+|++...
T Consensus 588 idPPR~~vP~Av~~CrsAGIkvimVTgdhpi 618 (1019)
T KOG0203|consen 588 IDPPRAAVPDAVGKCRSAGIKVIMVTGDHPI 618 (1019)
T ss_pred cCCCcccCchhhhhhhhhCceEEEEecCccc
Confidence 3578888888899999999999999998753
No 249
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do
Probab=39.49 E-value=61 Score=30.38 Aligned_cols=24 Identities=29% Similarity=0.421 Sum_probs=20.1
Q ss_pred CChhhHHHHHHHHHcCeEEEEEeC
Q 023352 175 PLPESLKLYKKLLLLGIKIVFLTG 198 (283)
Q Consensus 175 ~ipga~eLl~~L~~~GikI~ivTg 198 (283)
.+|...++++.|+++|+++.+...
T Consensus 62 ~FPdp~~~i~~l~~~g~k~~~~~~ 85 (317)
T cd06600 62 RFPEPKKLIDELHKRNVKLVTIVD 85 (317)
T ss_pred cCCCHHHHHHHHHHCCCEEEEEee
Confidence 467888999999999999887653
No 250
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=39.18 E-value=34 Score=35.54 Aligned_cols=139 Identities=17% Similarity=0.136 Sum_probs=77.6
Q ss_pred chhhhhhhhhhc-cccccccchhhhHhHHHHHHhhhhhc----cCCCceeEEEecccccccCCc--ccccc--CCCcccC
Q 023352 89 VPEKCAGYVGHY-MLGQQYRMDSEVVANEAILYAQSLKL----AGDGKNIWVFDIDETSLSNLP--YYAKN--GFGVKPY 159 (283)
Q Consensus 89 ~p~~c~~~v~~y-~~~~~Y~~D~~~v~~~a~~y~~~~~~----~~~~~~avVFDIDgTLldn~~--y~~~~--~~g~~~~ 159 (283)
+=..|..-+... ..+..|..+...+...+....+.+.. ...++.-.|.|.|-|++.+.- ...+. .+....+
T Consensus 99 lC~~Cg~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~lv~Dld~tllh~~~~~~l~e~~~~l~~~~~ 178 (635)
T KOG0323|consen 99 LCASCGKDLESLQGRSFDYLVKGLQLSNEMVAFTKTLTTQFSSLNRKKLHLVLDLDHTLLHTILKSDLSETEKYLKEEAE 178 (635)
T ss_pred HHHHHHHHHHHhhccchhcccchhhhhhhhhhhhhHHHHHHHHHhhhcceeehhhhhHHHHhhccchhhhhhhhcccccc
Confidence 445676555544 44446666666666666666554321 123335889999999998532 11110 0111111
Q ss_pred ----Cchh--hhhhhhc--CCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC
Q 023352 160 ----NPTL--FNEWVNT--GKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS 228 (283)
Q Consensus 160 ----~~~~--~~~~~~~--~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~ 228 (283)
+... ++..... .-.+..|++.+||+++.+. +.+.+.|=.+..+.....+.|+--|.-.-+++|.|.++
T Consensus 179 ~~~sn~dl~~~~~~~~~~~~~vKlRP~~~efL~~~skl-femhVyTmg~R~YA~~i~~liDP~~~lF~dRIisrde~ 254 (635)
T KOG0323|consen 179 SVESNKDLFRFNPLGHDTEYLVKLRPFVHEFLKEANKL-FEMHVYTMGTRDYALEIAKLIDPEGKYFGDRIISRDES 254 (635)
T ss_pred cccccccceeecccCCCceEEEEeCccHHHHHHHHHhh-ceeEEEeccchHHHHHHHHHhCCCCccccceEEEecCC
Confidence 0000 1110000 1246789999999999855 89999988876555556666665554333566666553
No 251
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY. CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=39.13 E-value=1.1e+02 Score=28.56 Aligned_cols=25 Identities=20% Similarity=0.413 Sum_probs=21.3
Q ss_pred CCChhhHHHHHHHHHcCeEEEEEeC
Q 023352 174 PPLPESLKLYKKLLLLGIKIVFLTG 198 (283)
Q Consensus 174 ~~ipga~eLl~~L~~~GikI~ivTg 198 (283)
..+|...+++++|+++|+++++...
T Consensus 67 ~~FPdp~~mi~~L~~~G~k~~~~v~ 91 (317)
T cd06598 67 KAFPDPAGMIADLAKKGVKTIVITE 91 (317)
T ss_pred ccCCCHHHHHHHHHHcCCcEEEEEc
Confidence 4567778999999999999998775
No 252
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=38.73 E-value=12 Score=33.81 Aligned_cols=17 Identities=24% Similarity=0.053 Sum_probs=14.3
Q ss_pred eEeccCccchhhhccCc
Q 023352 251 RIIGNIGDQWSDLLGTN 267 (283)
Q Consensus 251 ~iv~~IGDq~sDl~ga~ 267 (283)
..+++|||+.+|+....
T Consensus 208 ~~v~~~GDs~NDi~m~~ 224 (273)
T PRK00192 208 VETIALGDSPNDLPMLE 224 (273)
T ss_pred ceEEEEcCChhhHHHHH
Confidence 56899999999998653
No 253
>PF01740 STAS: STAS domain; InterPro: IPR002645 The STAS (Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function. The establishment of differential gene expression in sporulating Bacillus subtilis involves four protein components one of which is SpoIIAA (P10727 from SWISSPROT). The four components regulate the sporulation sigma factor F. Early in sporulation, SpoIIAA is in the phosphorylated state (SpoIIAA-P), as a result of the activity of the ATP-dependent protein kinase SpoIIAB (P10728 from SWISSPROT). The site at which this protein is a conserved serine. SpoIIAB is an anti-sigma factor that in its free form inhibits F by binding to it. Competition by SpoIIAA (the anti-anti-sigma factor) for binding to SpoIIAB releases Sigma F activity []. The STAS domain is found in the anti-sigma factor antagonist SpoIIAA.; PDB: 3T6O_B 3LKL_B 1H4Z_A 1H4Y_B 1H4X_B 3NY7_A 3OIZ_A 1T6R_A 1VC1_B 1SBO_A ....
Probab=38.13 E-value=23 Score=27.45 Aligned_cols=57 Identities=16% Similarity=0.297 Sum_probs=41.8
Q ss_pred ceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhh
Q 023352 131 KNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEAN 210 (283)
Q Consensus 131 ~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~ 210 (283)
.+.+|||+.+.-. .| ...+....++.+.++++|.+++++.-++ ...+.
T Consensus 48 ~~~vIlD~s~v~~---------------iD------------ssgi~~L~~~~~~~~~~g~~~~l~~~~~-----~v~~~ 95 (117)
T PF01740_consen 48 IKNVILDMSGVSF---------------ID------------SSGIQALVDIIKELRRRGVQLVLVGLNP-----DVRRI 95 (117)
T ss_dssp SSEEEEEETTESE---------------ES------------HHHHHHHHHHHHHHHHTTCEEEEESHHH-----HHHHH
T ss_pred ceEEEEEEEeCCc---------------CC------------HHHHHHHHHHHHHHHHCCCEEEEEECCH-----HHHHH
Confidence 5799999998522 11 1234556788999999999999988766 45566
Q ss_pred hhhccchhh
Q 023352 211 LKHAGFDTW 219 (283)
Q Consensus 211 L~~~G~~~~ 219 (283)
|...|+...
T Consensus 96 l~~~~~~~~ 104 (117)
T PF01740_consen 96 LERSGLIDF 104 (117)
T ss_dssp HHHTTGHHH
T ss_pred HHHcCCChh
Confidence 888888753
No 254
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=37.95 E-value=93 Score=33.17 Aligned_cols=44 Identities=16% Similarity=0.246 Sum_probs=30.6
Q ss_pred CCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccc
Q 023352 173 APPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGF 216 (283)
Q Consensus 173 ~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~ 216 (283)
..-+|....++++|+++|++++++-+=.-.+....-+-+.+.|+
T Consensus 317 ~~~FP~pk~mi~~l~~~Gikl~~~i~P~i~~d~~~~~e~~~~Gy 360 (772)
T COG1501 317 PDRFPDPKQMIAELHEKGIKLIVIINPYIKQDSPLFKEAIEKGY 360 (772)
T ss_pred cccCCCHHHHHHHHHhcCceEEEEeccccccCCchHHHHHHCCe
Confidence 34577778999999999999999887543333333444455555
No 255
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=37.47 E-value=42 Score=26.36 Aligned_cols=27 Identities=26% Similarity=0.177 Sum_probs=22.9
Q ss_pred CCChhhHHHHHHHHHcCeEEEEEeCCC
Q 023352 174 PPLPESLKLYKKLLLLGIKIVFLTGRP 200 (283)
Q Consensus 174 ~~ipga~eLl~~L~~~GikI~ivTgR~ 200 (283)
---+.+++.++.++++|.+++.+|+..
T Consensus 54 G~t~e~i~~~~~a~~~g~~iI~IT~~~ 80 (119)
T cd05017 54 GNTEETLSAVEQAKERGAKIVAITSGG 80 (119)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 345788899999999999999999754
No 256
>cd05006 SIS_GmhA Phosphoheptose isomerase is a member of the SIS (Sugar ISomerase) superfamily. Phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate into D-glycero-D-mannoheptose 7-phosphate. This is the first step of the biosynthesis of gram-negative bacteria inner core lipopolysaccharide precursor, L-glycero-D-mannoheptose (Gmh).
Probab=36.88 E-value=44 Score=28.15 Aligned_cols=28 Identities=32% Similarity=0.361 Sum_probs=24.7
Q ss_pred CCChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 174 PPLPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 174 ~~ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
.--+.+.+.++.++++|.+++.+|+.+.
T Consensus 112 G~t~~~i~~~~~ak~~Ga~vI~IT~~~~ 139 (177)
T cd05006 112 GNSPNVLKALEAAKERGMKTIALTGRDG 139 (177)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 4457899999999999999999999874
No 257
>PF09198 T4-Gluco-transf: Bacteriophage T4 beta-glucosyltransferase; InterPro: IPR015281 Members of this family are DNA-modifying enzymes encoded by bacteriophage T4 that transfer glucose from uridine diphosphoglucose to 5-hydroxymethyl cytosine bases of phage T4 DNA []. ; PDB: 1J39_A 1SXQ_B 1NZF_A 1M5R_B 1JEJ_A 1JIV_A 1NZD_A 1NVK_A 2BGU_A 1JIU_A ....
Probab=35.90 E-value=16 Score=23.07 Aligned_cols=13 Identities=31% Similarity=0.509 Sum_probs=9.2
Q ss_pred ccccccccchhhh
Q 023352 81 NNVIGWATVPEKC 93 (283)
Q Consensus 81 ~n~~~~~~~p~~c 93 (283)
||+.+++|+|+.-
T Consensus 10 nni~~fkt~p~se 22 (38)
T PF09198_consen 10 NNIQNFKTTPSSE 22 (38)
T ss_dssp S--SSSSSHHHHH
T ss_pred CceeceeecCccc
Confidence 7999999999743
No 258
>TIGR00441 gmhA phosphoheptose isomerase. Involved in lipopolysaccharide biosynthesis it may have a role in virulence in Haemophilus ducreyi.
Probab=35.55 E-value=49 Score=27.43 Aligned_cols=27 Identities=22% Similarity=0.224 Sum_probs=23.6
Q ss_pred CChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 175 PLPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 175 ~ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
--+.+.+.++.++++|.+++.+|+.+.
T Consensus 91 ~t~~~~~~~~~a~~~g~~ii~iT~~~~ 117 (154)
T TIGR00441 91 NSKNVLKAIEAAKDKGMKTITLAGKDG 117 (154)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 347788999999999999999999774
No 259
>PF13701 DDE_Tnp_1_4: Transposase DDE domain group 1
Probab=35.33 E-value=35 Score=33.81 Aligned_cols=18 Identities=28% Similarity=0.141 Sum_probs=14.8
Q ss_pred CCceeEEEecccccccCC
Q 023352 129 DGKNIWVFDIDETSLSNL 146 (283)
Q Consensus 129 ~~~~avVFDIDgTLldn~ 146 (283)
..+..|++|||.|..++.
T Consensus 137 ~~~~~i~LDiD~T~~~~~ 154 (448)
T PF13701_consen 137 KPPKEIVLDIDSTVDDVH 154 (448)
T ss_pred cccceEEEecccccccch
Confidence 456899999999997754
No 260
>PRK13937 phosphoheptose isomerase; Provisional
Probab=35.12 E-value=47 Score=28.52 Aligned_cols=27 Identities=37% Similarity=0.433 Sum_probs=23.9
Q ss_pred CChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 175 PLPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 175 ~ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
--+.+.+.++.++++|.+++.+|+.+.
T Consensus 118 ~t~~~~~~~~~ak~~g~~~I~iT~~~~ 144 (188)
T PRK13937 118 NSPNVLAALEKARELGMKTIGLTGRDG 144 (188)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 457889999999999999999999764
No 261
>PF08139 LPAM_1: Prokaryotic membrane lipoprotein lipid attachment site; InterPro: IPR012640 In prokaryotes, membrane lipoproteins are synthesized with a precursor signal peptide, which is cleaved by a specific lipoprotein signal peptidase (signal peptidase II). The peptidase recognises a conserved sequence and cuts upstream of a cysteine residue to which a glyceride-fatty acid lipid is attached [,]. This lipid attachment site is found in homologues of the VirB proteins of type IV secretion systems (T4SS). Conjugal transfer across the cell envelope of Gram-negative bacteria is mediated by a supramolecular structure termed mating pair formation (Mpf) complex. Collectively, secretion pathways ancestrally related to bacterial conjugation systems are now known as T4SS. T4SS are involved in the delivery of effector molecules to eukaryotic target cells; each of these systems exports distinct DNA or protein substrates to effect a myriad of changes in host cell physiology during infection [].
Probab=34.63 E-value=35 Score=20.09 Aligned_cols=12 Identities=8% Similarity=-0.075 Sum_probs=6.9
Q ss_pred HHHHHHHHhccc
Q 023352 12 FFFLATISATSH 23 (283)
Q Consensus 12 ~~~~~~~~~~~~ 23 (283)
.+++++..++|+
T Consensus 13 ~l~a~~~LagCs 24 (25)
T PF08139_consen 13 PLLALFMLAGCS 24 (25)
T ss_pred HHHHHHHHhhcc
Confidence 444444467886
No 262
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=34.45 E-value=20 Score=31.02 Aligned_cols=25 Identities=16% Similarity=0.065 Sum_probs=16.8
Q ss_pred eEeccCccchhhhccCccCCccccC
Q 023352 251 RIIGNIGDQWSDLLGTNAGNRTFKL 275 (283)
Q Consensus 251 ~iv~~IGDq~sDl~ga~ag~r~fkL 275 (283)
..++.|||+.+|+.--......+.+
T Consensus 196 ~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 196 VKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred CcEEEECCCHHHHHHHHhCCceEEe
Confidence 4589999999999865322233443
No 263
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=34.24 E-value=51 Score=27.81 Aligned_cols=29 Identities=21% Similarity=0.324 Sum_probs=24.9
Q ss_pred CCCChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 173 APPLPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 173 ~~~ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
..--+.+.++++.++++|.+++.+|+.+.
T Consensus 85 sG~t~~~i~~~~~ak~~g~~iI~IT~~~~ 113 (179)
T cd05005 85 SGETSSVVNAAEKAKKAGAKVVLITSNPD 113 (179)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 34467889999999999999999999874
No 264
>COG4594 FecB ABC-type Fe3+-citrate transport system, periplasmic component [Inorganic ion transport and metabolism]
Probab=34.03 E-value=30 Score=32.07 Aligned_cols=26 Identities=19% Similarity=0.253 Sum_probs=20.3
Q ss_pred CCCCccchhHHHHHHHHHHhcccccc
Q 023352 1 MSMGGVSLPLFFFFLATISATSHGFS 26 (283)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 26 (283)
|.|..+.+++|++++.++.++|+..+
T Consensus 1 ~~~~~~~~i~~lll~lllva~C~~s~ 26 (310)
T COG4594 1 MHMKKTAIILTLLLLLLLVAACSSSD 26 (310)
T ss_pred CCchhhHHHHHHHHHHHHHHHhcCcC
Confidence 55666778888888888889998764
No 265
>PF09680 Tiny_TM_bacill: Protein of unknown function (Tiny_TM_bacill); InterPro: IPR010070 This entry represents a family of hypothetical proteins, half of which are 40 residues or less in length. Members are found only in spore-forming species. A Gly-rich variable region is followed by a strongly conserved, highly hydrophobic region, predicted to form a transmembrane helix, ending with an invariant Gly. The consensus for this stretch is FALLVVFILLIIV.
Probab=33.80 E-value=31 Score=20.07 Aligned_cols=16 Identities=19% Similarity=0.476 Sum_probs=8.5
Q ss_pred chhHHHHHHHHHHhcc
Q 023352 7 SLPLFFFFLATISATS 22 (283)
Q Consensus 7 ~~~~~~~~~~~~~~~~ 22 (283)
+++++|++++.+.++|
T Consensus 8 livVLFILLiIvG~s~ 23 (24)
T PF09680_consen 8 LIVVLFILLIIVGASC 23 (24)
T ss_pred hHHHHHHHHHHhccee
Confidence 3445455555555555
No 266
>TIGR02886 spore_II_AA anti-sigma F factor antagonist. The anti-sigma F factor antagonist, also called stage II sporulation protein AA, is a protein universal among endospore-forming bacteria, all of which belong to the Firmcutes
Probab=33.19 E-value=65 Score=24.39 Aligned_cols=41 Identities=20% Similarity=0.160 Sum_probs=30.1
Q ss_pred CChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhh
Q 023352 175 PLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWE 220 (283)
Q Consensus 175 ~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~ 220 (283)
.+-...++++.++++|.++.++.-++ ...+.|+..|+..+.
T Consensus 56 gi~~L~~~~~~~~~~g~~l~l~~~~~-----~v~~~l~~~gl~~~~ 96 (106)
T TIGR02886 56 GLGVILGRYKKIKNEGGEVIVCNVSP-----AVKRLFELSGLFKII 96 (106)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHhCCceEE
Confidence 34455677889999999999877655 456788888886543
No 267
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=32.45 E-value=50 Score=36.37 Aligned_cols=38 Identities=11% Similarity=0.107 Sum_probs=28.5
Q ss_pred hhhHHHHHHHH----HcCeEEEEEeCCCcccccccHhhhhhccch
Q 023352 177 PESLKLYKKLL----LLGIKIVFLTGRPEDQRNVTEANLKHAGFD 217 (283)
Q Consensus 177 pga~eLl~~L~----~~GikI~ivTgR~e~~r~~T~~~L~~~G~~ 217 (283)
+.+.++++.++ ...+.++|+|||+ ...+...|++.|++
T Consensus 787 ~~l~~~~~~~~~~~~~~~igfv~aTGR~---l~~~~~~l~~~~lp 828 (1050)
T TIGR02468 787 QIIKNIFEAVRKERMEGSSGFILSTSMT---ISEIQSFLKSGGLN 828 (1050)
T ss_pred HHHHHHHHHHhccccCCceEEEEEcCCC---HHHHHHHHHhCCCC
Confidence 34455566665 3348889999999 67788889999998
No 268
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37. The gene encoding Aec37 (aec-37) is located within a genomic island (AGI-3) isolated from the extraintestinal avian pathogenic Escherichia coli strain BEN2908. The function of Aec37 and its orthologs is unknown; however, deletion of a region of the genome that includes aec-37 affects the assimilation of seven carbohydrates, decreases growth rate of the strain in minimal medium containing galacturonate or trehalose, and attenuates the virulence of E. coli BEN2908 in chickens. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=32.41 E-value=1.9e+02 Score=27.06 Aligned_cols=25 Identities=16% Similarity=0.215 Sum_probs=21.4
Q ss_pred CCChhhHHHHHHHHHcCeEEEEEeC
Q 023352 174 PPLPESLKLYKKLLLLGIKIVFLTG 198 (283)
Q Consensus 174 ~~ipga~eLl~~L~~~GikI~ivTg 198 (283)
..+|...+++++|+++|+++++...
T Consensus 70 ~~FPdp~~mi~~L~~~g~k~~~~i~ 94 (317)
T cd06599 70 DRFPDPAAFVAKFHERGIRLAPNIK 94 (317)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeC
Confidence 4678889999999999999987554
No 269
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.
Probab=32.11 E-value=77 Score=23.11 Aligned_cols=40 Identities=25% Similarity=0.342 Sum_probs=28.1
Q ss_pred CCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchh
Q 023352 174 PPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDT 218 (283)
Q Consensus 174 ~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~ 218 (283)
..+--..++.+.++++|.++.+..-++ ...+.|+..|+..
T Consensus 54 ~g~~~L~~l~~~~~~~g~~v~i~~~~~-----~~~~~l~~~gl~~ 93 (99)
T cd07043 54 SGLGVLLGAYKRARAAGGRLVLVNVSP-----AVRRVLELTGLDR 93 (99)
T ss_pred hhHHHHHHHHHHHHHcCCeEEEEcCCH-----HHHHHHHHhCcce
Confidence 345556778889999999877776554 3456777777764
No 270
>cd04795 SIS SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=32.09 E-value=55 Score=23.43 Aligned_cols=22 Identities=27% Similarity=0.279 Sum_probs=20.1
Q ss_pred ChhhHHHHHHHHHcCeEEEEEe
Q 023352 176 LPESLKLYKKLLLLGIKIVFLT 197 (283)
Q Consensus 176 ipga~eLl~~L~~~GikI~ivT 197 (283)
-+.+.++++.++++|.+++.+|
T Consensus 60 t~~~~~~~~~a~~~g~~ii~it 81 (87)
T cd04795 60 TEELLAALEIAKELGIPVIAIT 81 (87)
T ss_pred CHHHHHHHHHHHHcCCeEEEEe
Confidence 4778899999999999999999
No 271
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=31.88 E-value=47 Score=25.13 Aligned_cols=32 Identities=38% Similarity=0.415 Sum_probs=24.0
Q ss_pred hhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccch
Q 023352 178 ESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFD 217 (283)
Q Consensus 178 ga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~ 217 (283)
+++++.+.|.+.|++|+ .|+ -|.+.|+++|++
T Consensus 1 e~~~~a~~l~~lG~~i~-AT~-------gTa~~L~~~Gi~ 32 (95)
T PF02142_consen 1 EIVPLAKRLAELGFEIY-ATE-------GTAKFLKEHGIE 32 (95)
T ss_dssp THHHHHHHHHHTTSEEE-EEH-------HHHHHHHHTT--
T ss_pred CHHHHHHHHHHCCCEEE-ECh-------HHHHHHHHcCCC
Confidence 46789999999998775 444 367899999998
No 272
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=31.80 E-value=8 Score=34.84 Aligned_cols=43 Identities=23% Similarity=0.264 Sum_probs=28.1
Q ss_pred CCceeEEeechhhhHhhhhCceEeccCccch-hhhccC-ccCCccc
Q 023352 230 SGETAVVYKSSERKKLEMKGYRIIGNIGDQW-SDLLGT-NAGNRTF 273 (283)
Q Consensus 230 ~~KP~~~yK~~~r~~l~~~gy~iv~~IGDq~-sDl~ga-~ag~r~f 273 (283)
-+||.+.|+....+.+- -....+.+|||.. .|+.|+ .-|+|-+
T Consensus 179 vGKP~~~fFe~al~~~g-v~p~~aVMIGDD~~dDvgGAq~~GMrgi 223 (262)
T KOG3040|consen 179 VGKPSPFFFESALQALG-VDPEEAVMIGDDLNDDVGGAQACGMRGI 223 (262)
T ss_pred ecCCCHHHHHHHHHhcC-CChHHheEEccccccchhhHhhhcceeE
Confidence 68899988765555542 1234578999998 566666 4476643
No 273
>smart00851 MGS MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357.
Probab=31.70 E-value=49 Score=24.67 Aligned_cols=32 Identities=38% Similarity=0.531 Sum_probs=24.8
Q ss_pred hHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchh
Q 023352 179 SLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDT 218 (283)
Q Consensus 179 a~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~ 218 (283)
..++.+.|.+.|++|+ .|.. |.+.|++.|++.
T Consensus 2 ~~~~~~~l~~lG~~i~-AT~g-------Ta~~L~~~Gi~~ 33 (90)
T smart00851 2 LVELAKRLAELGFELV-ATGG-------TAKFLREAGLPV 33 (90)
T ss_pred HHHHHHHHHHCCCEEE-EccH-------HHHHHHHCCCcc
Confidence 4678889999999995 5653 567888889864
No 274
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase. Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=31.69 E-value=1.1e+02 Score=28.29 Aligned_cols=24 Identities=17% Similarity=0.396 Sum_probs=20.4
Q ss_pred CChhhHHHHHHHHHcCeEEEEEeC
Q 023352 175 PLPESLKLYKKLLLLGIKIVFLTG 198 (283)
Q Consensus 175 ~ipga~eLl~~L~~~GikI~ivTg 198 (283)
.+|...+++++|+++|+++++...
T Consensus 68 ~FPdp~~mi~~l~~~G~k~~l~i~ 91 (303)
T cd06592 68 KFPDPKGMIDQLHDLGFRVTLWVH 91 (303)
T ss_pred hCCCHHHHHHHHHHCCCeEEEEEC
Confidence 567889999999999999887655
No 275
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=31.44 E-value=52 Score=31.04 Aligned_cols=42 Identities=19% Similarity=0.364 Sum_probs=35.2
Q ss_pred hhhHHHHHHHHHcCe--EEEEEeCCCcccccccHhhhhhccchh
Q 023352 177 PESLKLYKKLLLLGI--KIVFLTGRPEDQRNVTEANLKHAGFDT 218 (283)
Q Consensus 177 pga~eLl~~L~~~Gi--kI~ivTgR~e~~r~~T~~~L~~~G~~~ 218 (283)
..++++++..+++|. +|++.=+||..+-..+.+.|++.|++.
T Consensus 130 ~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~ak~L~~~gI~~ 173 (301)
T COG1184 130 KTVLEVLKTAADRGKRFKVIVTESRPRGEGRIMAKELRQSGIPV 173 (301)
T ss_pred HHHHHHHHHhhhcCCceEEEEEcCCCcchHHHHHHHHHHcCCce
Confidence 357788888888874 899999999888888999999999763
No 276
>TIGR00377 ant_ant_sig anti-anti-sigma factor. This superfamily includes small (105-125 residue) proteins related to SpoIIAA of Bacillus subtilis, an anti-anti-sigma factor. SpoIIAA can bind to and inhibit the anti-sigma F factor SpoIIAB. Also, it can be phosphorylated by SpoIIAB on a Ser residue at position 59 of the seed alignment. A similar arrangement is inferred for RsbV, an anti-anti-sigma factor for sigma B. This Ser is fairly well conserved within a motif resembling MXS[STA]G[VIL]X[VIL][VILF] among homologous known or predicted anti-anti-sigma factors. Regions similar to SpoIIAA and apparently homologous, but differing considerably near the phosphorlated Ser of SpoIIAA, appear in a single copy in several longer proteins.
Probab=31.23 E-value=1.1e+02 Score=23.07 Aligned_cols=59 Identities=20% Similarity=0.269 Sum_probs=39.6
Q ss_pred CceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHh
Q 023352 130 GKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEA 209 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~ 209 (283)
.++.++||+.+.-.- ....+.-..++++.++++|..+.++.-++ ...+
T Consensus 42 ~~~~vvidls~v~~i---------------------------Dssgl~~L~~~~~~~~~~~~~~~l~~~~~-----~~~~ 89 (108)
T TIGR00377 42 GPRPIVLDLEDLEFM---------------------------DSSGLGVLLGRYKQVRRVGGQLVLVSVSP-----RVAR 89 (108)
T ss_pred CCCeEEEECCCCeEE---------------------------ccccHHHHHHHHHHHHhcCCEEEEEeCCH-----HHHH
Confidence 567899999884321 12334455677888899998877766544 4567
Q ss_pred hhhhccchhhh
Q 023352 210 NLKHAGFDTWE 220 (283)
Q Consensus 210 ~L~~~G~~~~~ 220 (283)
.|+..|+....
T Consensus 90 ~l~~~~l~~~~ 100 (108)
T TIGR00377 90 LLDITGLLRII 100 (108)
T ss_pred HHHHhChhhee
Confidence 77888887633
No 277
>PF00578 AhpC-TSA: AhpC/TSA family; InterPro: IPR000866 Peroxiredoxins (Prxs) are a ubiquitous family of antioxidant enzymes that also control cytokine-induced peroxide levels which mediate signal transduction in mammalian cells. Prxs can be regulated by changes to phosphorylation, redox and possibly oligomerisation states. Prxs are divided into three classes: typical 2-Cys Prxs; atypical 2-Cys Prxs; and 1-Cys Prxs. All Prxs share the same basic catalytic mechanism, in which an active-site cysteine (the peroxidatic cysteine) is oxidised to a sulphenic acid by the peroxide substrate. The recycling of the sulphenic acid back to a thiol is what distinguishes the three enzyme classes. Using crystal structures, a detailed catalytic cycle has been derived for typical 2-Cys Prxs, including a model for the redox-regulated oligomeric state proposed to control enzyme activity []. Alkyl hydroperoxide reductase (AhpC) is responsible for directly reducing organic hyperoxides in its reduced dithiol form. Thiol specific antioxidant (TSA) is a physiologically important antioxidant which constitutes an enzymatic defence against sulphur-containing radicals. This family contains AhpC and TSA, as well as related proteins.; GO: 0016209 antioxidant activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QMV_A 1PRX_B 3HJP_C 3HA9_A 2V41_G 2V32_C 2V2G_C 3LWA_A 3IA1_B 1ZYE_G ....
Probab=31.19 E-value=56 Score=24.99 Aligned_cols=40 Identities=25% Similarity=0.350 Sum_probs=30.6
Q ss_pred CChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccch
Q 023352 175 PLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFD 217 (283)
Q Consensus 175 ~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~ 217 (283)
.++...+++++++++|+.++.+|..+ .+...++++..+++
T Consensus 44 ~l~~l~~~~~~~~~~~~~vi~is~d~---~~~~~~~~~~~~~~ 83 (124)
T PF00578_consen 44 ELPELNELYKKYKDKGVQVIGISTDD---PEEIKQFLEEYGLP 83 (124)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEEESSS---HHHHHHHHHHHTCS
T ss_pred chhHHHHHhhhhccceEEeeeccccc---ccchhhhhhhhccc
Confidence 35677888889999999999999976 33566677766654
No 278
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities. Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source.
Probab=30.39 E-value=1e+02 Score=29.03 Aligned_cols=24 Identities=29% Similarity=0.469 Sum_probs=19.9
Q ss_pred CChhhHHHHHHHHHcCeEEEEEeC
Q 023352 175 PLPESLKLYKKLLLLGIKIVFLTG 198 (283)
Q Consensus 175 ~ipga~eLl~~L~~~GikI~ivTg 198 (283)
.+|...++++.|+++|+++.+...
T Consensus 62 ~fPdp~~m~~~l~~~g~~~~~~~~ 85 (339)
T cd06604 62 RFPDPKELIKELHEQGFKVVTIID 85 (339)
T ss_pred cCCCHHHHHHHHHHCCCEEEEEEe
Confidence 567789999999999999986543
No 279
>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E. This model describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=29.98 E-value=69 Score=30.14 Aligned_cols=42 Identities=21% Similarity=0.258 Sum_probs=30.1
Q ss_pred CChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccch
Q 023352 175 PLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFD 217 (283)
Q Consensus 175 ~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~ 217 (283)
..|...+++++++++|+.+.+.||..-- .+.+.+.|.+.|+.
T Consensus 66 l~~~~~~ii~~~~~~g~~~~l~TNG~ll-~~e~~~~L~~~g~~ 107 (358)
T TIGR02109 66 ARPDLVELVAHARRLGLYTNLITSGVGL-TEARLDALADAGLD 107 (358)
T ss_pred ccccHHHHHHHHHHcCCeEEEEeCCccC-CHHHHHHHHhCCCC
Confidence 4567789999999999999999997622 23345566666654
No 280
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=29.88 E-value=76 Score=24.90 Aligned_cols=36 Identities=19% Similarity=0.166 Sum_probs=25.0
Q ss_pred hhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchh
Q 023352 177 PESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDT 218 (283)
Q Consensus 177 pga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~ 218 (283)
-..+.+-+.|+++|+.|.+.|... ....+.+.|++.
T Consensus 13 ~P~lala~~L~~rGh~V~~~~~~~------~~~~v~~~Gl~~ 48 (139)
T PF03033_consen 13 YPFLALARALRRRGHEVRLATPPD------FRERVEAAGLEF 48 (139)
T ss_dssp HHHHHHHHHHHHTT-EEEEEETGG------GHHHHHHTT-EE
T ss_pred HHHHHHHHHHhccCCeEEEeeccc------ceecccccCceE
Confidence 345688899999999999999976 234446667653
No 281
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=29.20 E-value=27 Score=26.01 Aligned_cols=21 Identities=19% Similarity=0.317 Sum_probs=17.7
Q ss_pred ceeEEEecccccccCCccccc
Q 023352 131 KNIWVFDIDETSLSNLPYYAK 151 (283)
Q Consensus 131 ~~avVFDIDgTLldn~~y~~~ 151 (283)
.-.++++-|||.+++..|+..
T Consensus 38 ~~~l~L~eDGT~VddEeyF~t 58 (74)
T smart00266 38 PVTLVLEEDGTIVDDEEYFQT 58 (74)
T ss_pred CcEEEEecCCcEEccHHHHhc
Confidence 568999999999999877654
No 282
>TIGR03757 conj_TIGR03757 integrating conjugative element protein, PFL_4709 family. Members of this protein belong to extended genomic regions that appear to be spread by conjugative transfer.
Probab=28.97 E-value=73 Score=25.70 Aligned_cols=50 Identities=12% Similarity=0.068 Sum_probs=31.6
Q ss_pred ccchhhhhhhhhhccccccccchhhhHhHHHHHHh-hhhhccCCCceeEEEe
Q 023352 87 ATVPEKCAGYVGHYMLGQQYRMDSEVVANEAILYA-QSLKLAGDGKNIWVFD 137 (283)
Q Consensus 87 ~~~p~~c~~~v~~y~~~~~Y~~D~~~v~~~a~~y~-~~~~~~~~~~~avVFD 137 (283)
.+-|.+....+++.+.+.+++. ...-+..|+.-. +.-...=.+-+|||||
T Consensus 41 padp~qA~~~~~~~l~sp~~~~-~q~~l~~Ayqgv~~Aw~lGi~k~PAVV~D 91 (113)
T TIGR03757 41 PADPQQAAAQARQRLQSPDWAR-LQRRLAQAYQGVADAWQLGVTKIPAVVVD 91 (113)
T ss_pred CCCHHHHHHHHHHHHcCccHHH-HHHHHHHHHHHHHHHHHcCCccCCEEEEc
Confidence 4678999999999999977643 333333333332 2222233578899999
No 283
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=28.81 E-value=53 Score=31.37 Aligned_cols=48 Identities=25% Similarity=0.352 Sum_probs=36.1
Q ss_pred hhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchh
Q 023352 167 WVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDT 218 (283)
Q Consensus 167 ~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~ 218 (283)
|+.-++.+-.+=.+.++.+|+++|+.+. +|.|. +....+.|+..||+.
T Consensus 4 wiDI~n~~hvhfFk~lI~elekkG~ev~-iT~rd---~~~v~~LLd~ygf~~ 51 (346)
T COG1817 4 WIDIGNPPHVHFFKNLIWELEKKGHEVL-ITCRD---FGVVTELLDLYGFPY 51 (346)
T ss_pred EEEcCCcchhhHHHHHHHHHHhCCeEEE-EEEee---cCcHHHHHHHhCCCe
Confidence 4444556666777889999999999765 56676 567788899999974
No 284
>COG2344 AT-rich DNA-binding protein [General function prediction only]
Probab=28.59 E-value=52 Score=29.18 Aligned_cols=44 Identities=23% Similarity=0.177 Sum_probs=37.0
Q ss_pred CCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchh
Q 023352 174 PPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDT 218 (283)
Q Consensus 174 ~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~ 218 (283)
-++.++.++-+.+++.++.++++|=..+. ...+.+.|-++|+.+
T Consensus 130 v~V~~~d~le~~v~~~dv~iaiLtVPa~~-AQ~vad~Lv~aGVkG 173 (211)
T COG2344 130 VPVYDLDDLEKFVKKNDVEIAILTVPAEH-AQEVADRLVKAGVKG 173 (211)
T ss_pred eeeechHHHHHHHHhcCccEEEEEccHHH-HHHHHHHHHHcCCce
Confidence 57778888889999999999999987654 567788899999876
No 285
>PF07511 DUF1525: Protein of unknown function (DUF1525); InterPro: IPR011090 This family of proteins is restricted to the Gammaproteobacteria. Members belong to extended genomic regions that appear to be spread by conjugative transfer.
Probab=28.54 E-value=73 Score=25.72 Aligned_cols=50 Identities=12% Similarity=0.104 Sum_probs=32.0
Q ss_pred ccchhhhhhhhhhccccccccchhhhHhHHHHHH-hhhhhccCCCceeEEEe
Q 023352 87 ATVPEKCAGYVGHYMLGQQYRMDSEVVANEAILY-AQSLKLAGDGKNIWVFD 137 (283)
Q Consensus 87 ~~~p~~c~~~v~~y~~~~~Y~~D~~~v~~~a~~y-~~~~~~~~~~~~avVFD 137 (283)
..-|.+....+++.+.++.|+.--.. +..|+.- .+...+.=.+-+|||||
T Consensus 40 padp~qA~~~~~~rl~s~~~~~~q~~-L~~Ayqgv~~Aw~lgi~k~PAVVfD 90 (114)
T PF07511_consen 40 PADPQQAEAQARQRLQSPDWQQLQQQ-LAQAYQGVVDAWSLGITKYPAVVFD 90 (114)
T ss_pred CCChHHHHHHHHHHHcCccHHHHHHH-HHHHHHHHHHHHHhCccccCEEEEc
Confidence 36788999999999999987543332 2233322 22223333678999999
No 286
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=28.50 E-value=29 Score=26.16 Aligned_cols=22 Identities=18% Similarity=0.326 Sum_probs=18.3
Q ss_pred CceeEEEecccccccCCccccc
Q 023352 130 GKNIWVFDIDETSLSNLPYYAK 151 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y~~~ 151 (283)
..-.++++-|||.+++..|+..
T Consensus 39 ~~~~lvL~eDGT~Vd~EeyF~~ 60 (78)
T cd06539 39 GLVTLVLEEDGTVVDTEEFFQT 60 (78)
T ss_pred CCcEEEEeCCCCEEccHHHHhh
Confidence 3568999999999999887754
No 287
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=28.50 E-value=71 Score=24.98 Aligned_cols=35 Identities=29% Similarity=0.233 Sum_probs=27.6
Q ss_pred ChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchh
Q 023352 176 LPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDT 218 (283)
Q Consensus 176 ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~ 218 (283)
.+.+.++.+.|.+.|++|+ .|. -|.++|++.|++.
T Consensus 11 K~~~~~~a~~l~~~G~~i~-AT~-------gTa~~L~~~Gi~~ 45 (112)
T cd00532 11 KAMLVDLAPKLSSDGFPLF-ATG-------GTSRVLADAGIPV 45 (112)
T ss_pred HHHHHHHHHHHHHCCCEEE-ECc-------HHHHHHHHcCCce
Confidence 4677888999999999985 665 3678888889874
No 288
>KOG0652 consensus 26S proteasome regulatory complex, ATPase RPT5 [Posttranslational modification, protein turnover, chaperones]
Probab=28.20 E-value=68 Score=30.18 Aligned_cols=73 Identities=23% Similarity=0.341 Sum_probs=43.0
Q ss_pred ccchhhhHhHHHHHHhhhhhccCCCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHH
Q 023352 106 YRMDSEVVANEAILYAQSLKLAGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKK 185 (283)
Q Consensus 106 Y~~D~~~v~~~a~~y~~~~~~~~~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~ 185 (283)
|.-|-+.++..|++.++ .+.++||| ||+ +|. .|...|+.+. .+.-..---+++||+.
T Consensus 245 fIGdGAkLVRDAFaLAK------EkaP~IIF-IDE--lDA--------IGtKRfDSek------~GDREVQRTMLELLNQ 301 (424)
T KOG0652|consen 245 FIGDGAKLVRDAFALAK------EKAPTIIF-IDE--LDA--------IGTKRFDSEK------AGDREVQRTMLELLNQ 301 (424)
T ss_pred hhcchHHHHHHHHHHhh------ccCCeEEE-Eec--hhh--------hccccccccc------cccHHHHHHHHHHHHh
Confidence 33455556666666553 34456776 455 221 4555666532 2222334567888888
Q ss_pred HH----HcCeEEEEEeCCCc
Q 023352 186 LL----LLGIKIVFLTGRPE 201 (283)
Q Consensus 186 L~----~~GikI~ivTgR~e 201 (283)
|. ...++|+-.|||-+
T Consensus 302 LDGFss~~~vKviAATNRvD 321 (424)
T KOG0652|consen 302 LDGFSSDDRVKVIAATNRVD 321 (424)
T ss_pred hcCCCCccceEEEeeccccc
Confidence 86 44689999999963
No 289
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes
Probab=27.84 E-value=1.6e+02 Score=26.71 Aligned_cols=26 Identities=19% Similarity=0.298 Sum_probs=22.9
Q ss_pred CChhhHHHHHHHHHcCeEEEEEeCCC
Q 023352 175 PLPESLKLYKKLLLLGIKIVFLTGRP 200 (283)
Q Consensus 175 ~ipga~eLl~~L~~~GikI~ivTgR~ 200 (283)
-+|...++++.|+++|+++++.+.-.
T Consensus 64 ~Fpdp~~~i~~l~~~g~~~~~~~~P~ 89 (265)
T cd06589 64 KFPNPKSMIDELHDNGVKLVLWIDPY 89 (265)
T ss_pred hCCCHHHHHHHHHHCCCEEEEEeChh
Confidence 56788999999999999999988754
No 290
>cd06525 GH25_Lyc-like Lyc muramidase is an autolytic lysozyme (autolysin) from Clostridium acetobutylicum encoded by the lyc gene. Lyc has a glycosyl hydrolase family 25 (GH25) catalytic domain. Endo-N-acetylmuramidases are lysozymes (also referred to as peptidoglycan hydrolases) that degrade bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues.
Probab=27.80 E-value=72 Score=27.17 Aligned_cols=62 Identities=13% Similarity=0.017 Sum_probs=42.0
Q ss_pred hHhHHHHHHhhhhhccCCCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHc-C
Q 023352 112 VVANEAILYAQSLKLAGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLL-G 190 (283)
Q Consensus 112 ~v~~~a~~y~~~~~~~~~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~-G 190 (283)
....||..+.+.++..+ +...+++|+.++--. +. ......+.+++++++++ |
T Consensus 65 ~a~~qA~~f~~~~~~~~-~~~~~~lD~E~~~~~---------------~~-----------~~~~~~~~~f~~~v~~~~G 117 (184)
T cd06525 65 NPEEQAENFYNTIKGKK-MDLKPALDVEVNFGL---------------SK-----------DELNDYVLRFIEEFEKLSG 117 (184)
T ss_pred CHHHHHHHHHHhccccC-CCCCeEEEEecCCCC---------------CH-----------HHHHHHHHHHHHHHHHHHC
Confidence 35688888887776432 223578999885210 00 11124678899999998 9
Q ss_pred eEEEEEeCCC
Q 023352 191 IKIVFLTGRP 200 (283)
Q Consensus 191 ikI~ivTgR~ 200 (283)
.++.|=|+..
T Consensus 118 ~~~~iY~~~~ 127 (184)
T cd06525 118 LKVGIYTYTS 127 (184)
T ss_pred CCeEEEecHH
Confidence 9999999986
No 291
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=27.64 E-value=34 Score=30.46 Aligned_cols=14 Identities=29% Similarity=0.211 Sum_probs=12.3
Q ss_pred eeEEEecccccccC
Q 023352 132 NIWVFDIDETSLSN 145 (283)
Q Consensus 132 ~avVFDIDgTLldn 145 (283)
++|+|||.||+.+-
T Consensus 2 ~~~l~diegt~~~i 15 (220)
T TIGR01691 2 KNVLLDIEGTTGSI 15 (220)
T ss_pred CEEEEecCCCcccH
Confidence 58999999999874
No 292
>PRK13938 phosphoheptose isomerase; Provisional
Probab=27.13 E-value=79 Score=27.67 Aligned_cols=27 Identities=26% Similarity=0.299 Sum_probs=23.9
Q ss_pred CChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 175 PLPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 175 ~ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
--+.+++.++.++++|.+++.+|+.+.
T Consensus 125 ~t~~vi~a~~~Ak~~G~~vI~iT~~~~ 151 (196)
T PRK13938 125 NSMSVLRAAKTARELGVTVVAMTGESG 151 (196)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 457889999999999999999999774
No 293
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=27.02 E-value=51 Score=36.20 Aligned_cols=30 Identities=27% Similarity=0.165 Sum_probs=27.5
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
+.++-+++.+.++.|++.|+++.++||-..
T Consensus 629 eD~lq~~v~etI~~L~~AGIkv~mlTGD~~ 658 (1057)
T TIGR01652 629 EDKLQEGVPETIELLRQAGIKIWVLTGDKV 658 (1057)
T ss_pred hhhhhhccHHHHHHHHHCCCeEEEEcCCcH
Confidence 568999999999999999999999999764
No 294
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=27.00 E-value=69 Score=29.38 Aligned_cols=45 Identities=18% Similarity=0.326 Sum_probs=35.0
Q ss_pred CCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchh
Q 023352 171 GKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDT 218 (283)
Q Consensus 171 ~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~ 218 (283)
+..+..||=...=+.|++.|++.+++|..+... ....|+..||..
T Consensus 68 sPN~a~PGP~~ARE~l~~~~iP~IvI~D~p~~K---~~d~l~~~g~GY 112 (277)
T PRK00994 68 SPNPAAPGPKKAREILKAAGIPCIVIGDAPGKK---VKDAMEEQGLGY 112 (277)
T ss_pred CCCCCCCCchHHHHHHHhcCCCEEEEcCCCccc---hHHHHHhcCCcE
Confidence 445677777777777889999999999999542 348999988864
No 295
>cd06415 GH25_Cpl1-like Cpl-1 lysin (also known as Cpl-9 lysozyme / muramidase) is a bacterial cell wall endolysin encoded by the pneumococcal bacteriophage Cp-1, which cleaves the glycosidic N-acetylmuramoyl-(beta1,4)-N-acetylglucosamine bonds of the pneumococcal glycan chain, thus acting as an enzymatic antimicrobial agent (an enzybiotic) against streptococcal infections. Cpl-1 belongs to the CP family of lysozymes (CPL lysozymes) which includes the Cpl-7 lysin. Cpl-1 has a glycosyl hydrolase family 25 (GH25) catalytic domain with an irregular (beta/alpha)5-beta3 barrel and a C-terminal cell wall-anchoring module formed by six similar choline-binding repeats (ChBr's). The ChBr's facilitate the anchoring of Cpl-1 to the choline-containing teichoic acid of the pneumococcal cell wall. Other members of this domain family have an N-terminal CHAP (cysteine, histidine-dependent amidohydrolases/peptidases) domain similar to that of the firmicute CHAP lysins and associated with endopeptidase
Probab=26.92 E-value=95 Score=26.78 Aligned_cols=65 Identities=17% Similarity=0.171 Sum_probs=40.9
Q ss_pred hhhHhHHHHHHhhhhhccC-CCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHH
Q 023352 110 SEVVANEAILYAQSLKLAG-DGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLL 188 (283)
Q Consensus 110 ~~~v~~~a~~y~~~~~~~~-~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~ 188 (283)
.....+||..+.+.++..+ .....+++|+...-.. +.+. ....+..+++++++
T Consensus 66 ~~~a~~eA~~f~~~~~~~~l~~~~~~~lDvE~~~~~---------------~~~~-----------~~~~~~~f~~~v~~ 119 (196)
T cd06415 66 VSQAKYEADYFLNSAQQAGLPKGSYLALDYEQGSGN---------------SKAA-----------NTSAILAFMDTIKD 119 (196)
T ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEEEEecCCCC---------------CHHH-----------HHHHHHHHHHHHHH
Confidence 3456677877776665321 1123578999874110 1111 12346789999999
Q ss_pred cCeEEEEEeCCC
Q 023352 189 LGIKIVFLTGRP 200 (283)
Q Consensus 189 ~GikI~ivTgR~ 200 (283)
.|++..|=|++.
T Consensus 120 ~G~~~~iYt~~~ 131 (196)
T cd06415 120 AGYKPMLYSYKP 131 (196)
T ss_pred hCCCcEEEecHH
Confidence 999999999976
No 296
>cd07041 STAS_RsbR_RsbS_like Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.
Probab=26.58 E-value=96 Score=23.57 Aligned_cols=39 Identities=28% Similarity=0.380 Sum_probs=29.0
Q ss_pred CChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchh
Q 023352 175 PLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDT 218 (283)
Q Consensus 175 ~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~ 218 (283)
.+.-..++++.++.+|.++.++--++ ...+.|+..|+..
T Consensus 58 g~~~l~~~~~~~~~~g~~l~l~g~~~-----~v~~~l~~~gl~~ 96 (109)
T cd07041 58 VARHLLRLARALRLLGARTILTGIRP-----EVAQTLVELGIDL 96 (109)
T ss_pred HHHHHHHHHHHHHHcCCeEEEEeCCH-----HHHHHHHHhCCCh
Confidence 34455678889999999998887765 4567788888754
No 297
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose. YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes.
Probab=26.29 E-value=2.6e+02 Score=25.77 Aligned_cols=25 Identities=16% Similarity=0.332 Sum_probs=21.3
Q ss_pred CCChhhHHHHHHHHHcCeEEEEEeC
Q 023352 174 PPLPESLKLYKKLLLLGIKIVFLTG 198 (283)
Q Consensus 174 ~~ipga~eLl~~L~~~GikI~ivTg 198 (283)
..+|...++++.|+++|+++++...
T Consensus 63 ~~FPd~~~~i~~l~~~G~~~~~~~~ 87 (308)
T cd06593 63 DRFPDPEGMLSRLKEKGFKVCLWIN 87 (308)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEec
Confidence 3567789999999999999998765
No 298
>PRK10658 putative alpha-glucosidase; Provisional
Probab=26.16 E-value=1.8e+02 Score=30.42 Aligned_cols=26 Identities=23% Similarity=0.388 Sum_probs=22.0
Q ss_pred CCChhhHHHHHHHHHcCeEEEEEeCC
Q 023352 174 PPLPESLKLYKKLLLLGIKIVFLTGR 199 (283)
Q Consensus 174 ~~ipga~eLl~~L~~~GikI~ivTgR 199 (283)
.-+|.-.+++++|+++|+++.+..+-
T Consensus 322 ~~FPdp~~mi~~L~~~G~k~~~~i~P 347 (665)
T PRK10658 322 RTFPDPEGMLKRLKAKGLKICVWINP 347 (665)
T ss_pred hhCCCHHHHHHHHHHCCCEEEEeccC
Confidence 35678889999999999999988764
No 299
>cd06523 GH25_PlyB-like PlyB is a bacteriophage endolysin that displays potent lytic activity toward Bacillus anthracis. PlyB has an N-terminal glycosyl hydrolase family 25 (GH25) catalytic domain and a C-terminal bacterial SH3-like domain, SH3b. Both domains are required for effective catalytic activity. Endolysins are produced by bacteriophages at the end of their life cycle and participate in lysing the bacterial cell in order to release the newly formed progeny. Endolysins (also referred to as endo-N-acetylmuramidases or peptidoglycan hydrolases) degrade bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues.
Probab=25.85 E-value=1.5e+02 Score=25.10 Aligned_cols=59 Identities=19% Similarity=0.216 Sum_probs=39.3
Q ss_pred hhhHhHHHHHHhhhhhccCCCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHc
Q 023352 110 SEVVANEAILYAQSLKLAGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLL 189 (283)
Q Consensus 110 ~~~v~~~a~~y~~~~~~~~~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~ 189 (283)
.....+||..+.+.++. ++..+++|++++.. ......+..|++++++.
T Consensus 66 ~~~a~~eA~~f~~~~~~---~~~~~~lD~E~~~~-----------------------------~~~~~~~~~f~~~v~~~ 113 (177)
T cd06523 66 TADAKAEARDFYNRANK---KPTFYVLDVEVTSM-----------------------------SDMNAGVQAFISELRRL 113 (177)
T ss_pred HHHHHHHHHHHHHHhcC---CCceEEEeeccCCc-----------------------------chHHHHHHHHHHHHHHc
Confidence 44566778777666543 44568899987421 11234578899999998
Q ss_pred Ce-EEEEEeCCC
Q 023352 190 GI-KIVFLTGRP 200 (283)
Q Consensus 190 Gi-kI~ivTgR~ 200 (283)
|. +++|=|++.
T Consensus 114 g~~~~~lYt~~~ 125 (177)
T cd06523 114 GAKKVGLYIGHH 125 (177)
T ss_pred cCCcEEEEchHH
Confidence 76 667778765
No 300
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=25.76 E-value=1.2e+02 Score=24.94 Aligned_cols=81 Identities=11% Similarity=0.107 Sum_probs=43.7
Q ss_pred hHHHHHHHHHcCeEEEEEeCCCcccc---cccHhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCceEecc
Q 023352 179 SLKLYKKLLLLGIKIVFLTGRPEDQR---NVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGN 255 (283)
Q Consensus 179 a~eLl~~L~~~GikI~ivTgR~e~~r---~~T~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~iv~~ 255 (283)
..++++...+.+..++.+|....... ..+.+.|++.|++. -.+++.+....++.++ ...+..+++.|+..+.-
T Consensus 43 ~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~-~~i~vGG~~~~~~~~~---~~~~~~l~~~G~~~vf~ 118 (137)
T PRK02261 43 QEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGD-ILLYVGGNLVVGKHDF---EEVEKKFKEMGFDRVFP 118 (137)
T ss_pred HHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCC-CeEEEECCCCCCccCh---HHHHHHHHHcCCCEEEC
Confidence 45566667777888888887654332 23445566666654 3445554322111111 23345666677765555
Q ss_pred Cccchhhh
Q 023352 256 IGDQWSDL 263 (283)
Q Consensus 256 IGDq~sDl 263 (283)
-|....++
T Consensus 119 ~~~~~~~i 126 (137)
T PRK02261 119 PGTDPEEA 126 (137)
T ss_pred cCCCHHHH
Confidence 55555444
No 301
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional
Probab=25.51 E-value=92 Score=29.61 Aligned_cols=42 Identities=24% Similarity=0.181 Sum_probs=29.6
Q ss_pred CChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccch
Q 023352 175 PLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFD 217 (283)
Q Consensus 175 ~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~ 217 (283)
..|...+++++++++|+.+.+.||..-- .+...+.|.+.|+.
T Consensus 75 l~~~~~~il~~~~~~g~~~~i~TNG~ll-~~~~~~~L~~~g~~ 116 (378)
T PRK05301 75 LRKDLEELVAHARELGLYTNLITSGVGL-TEARLAALKDAGLD 116 (378)
T ss_pred CchhHHHHHHHHHHcCCcEEEECCCccC-CHHHHHHHHHcCCC
Confidence 4567788999999999999999997632 22334556666654
No 302
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=25.34 E-value=75 Score=25.75 Aligned_cols=22 Identities=27% Similarity=0.478 Sum_probs=19.4
Q ss_pred hhhHHHHHHHHHcCeEEEEEeC
Q 023352 177 PESLKLYKKLLLLGIKIVFLTG 198 (283)
Q Consensus 177 pga~eLl~~L~~~GikI~ivTg 198 (283)
|.+++.+++.+++|.+++-+||
T Consensus 117 ~~vi~a~~~Ak~~G~~vIalTg 138 (138)
T PF13580_consen 117 PNVIEAAEEAKERGMKVIALTG 138 (138)
T ss_dssp HHHHHHHHHHHHTT-EEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEeC
Confidence 7889999999999999999986
No 303
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=25.28 E-value=43 Score=25.34 Aligned_cols=23 Identities=17% Similarity=0.189 Sum_probs=18.8
Q ss_pred CCceeEEEecccccccCCccccc
Q 023352 129 DGKNIWVFDIDETSLSNLPYYAK 151 (283)
Q Consensus 129 ~~~~avVFDIDgTLldn~~y~~~ 151 (283)
..+-.++++-|||.+++..|+..
T Consensus 40 ~~~~~lvL~eDGT~VddEeyF~t 62 (80)
T cd06536 40 SAPITLVLAEDGTIVEDEDYFLC 62 (80)
T ss_pred CCceEEEEecCCcEEccHHHHhh
Confidence 34678999999999999877654
No 304
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=25.28 E-value=42 Score=25.46 Aligned_cols=22 Identities=18% Similarity=0.324 Sum_probs=18.4
Q ss_pred CceeEEEecccccccCCccccc
Q 023352 130 GKNIWVFDIDETSLSNLPYYAK 151 (283)
Q Consensus 130 ~~~avVFDIDgTLldn~~y~~~ 151 (283)
..-.++++-|||.+++..|+..
T Consensus 38 ~~~~lvLeeDGT~Vd~EeyF~t 59 (81)
T cd06537 38 GVLTLVLEEDGTAVDSEDFFEL 59 (81)
T ss_pred CceEEEEecCCCEEccHHHHhh
Confidence 4578999999999999887754
No 305
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=25.02 E-value=91 Score=27.30 Aligned_cols=26 Identities=23% Similarity=0.208 Sum_probs=23.2
Q ss_pred ChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 176 LPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 176 ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
-+.+.+.++.++++|.+++.+|+.+.
T Consensus 122 s~~v~~a~~~Ak~~G~~vI~IT~~~~ 147 (196)
T PRK10886 122 SRDIVKAVEAAVTRDMTIVALTGYDG 147 (196)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 46788999999999999999999874
No 306
>PRK13936 phosphoheptose isomerase; Provisional
Probab=24.91 E-value=91 Score=27.03 Aligned_cols=26 Identities=19% Similarity=0.211 Sum_probs=22.9
Q ss_pred ChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 176 LPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 176 ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
-+.+.++++.++++|.+++.+|+.+.
T Consensus 124 t~~~~~~~~~ak~~g~~iI~IT~~~~ 149 (197)
T PRK13936 124 SANVIQAIQAAHEREMHVVALTGRDG 149 (197)
T ss_pred cHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 46788999999999999999999763
No 307
>PTZ00459 mucin-associated surface protein (MASP); Provisional
Probab=24.69 E-value=37 Score=31.76 Aligned_cols=15 Identities=33% Similarity=0.288 Sum_probs=8.4
Q ss_pred CCCCccchhHHHHHH
Q 023352 1 MSMGGVSLPLFFFFL 15 (283)
Q Consensus 1 ~~~~~~~~~~~~~~~ 15 (283)
|-|.||||+|-|.+|
T Consensus 4 mMTGRVLLVCALCVL 18 (291)
T PTZ00459 4 MMTGRVLLVCALCVL 18 (291)
T ss_pred chhchHHHHHHHHHH
Confidence 346787666633333
No 308
>PRK00414 gmhA phosphoheptose isomerase; Reviewed
Probab=24.53 E-value=92 Score=26.94 Aligned_cols=27 Identities=22% Similarity=0.289 Sum_probs=23.6
Q ss_pred CChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 175 PLPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 175 ~ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
--+.+.+.++.++++|.+++.+|+.+.
T Consensus 123 ~t~~~i~~~~~ak~~g~~iI~iT~~~~ 149 (192)
T PRK00414 123 NSGNIIKAIEAARAKGMKVITLTGKDG 149 (192)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 357888999999999999999999863
No 309
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 31 GH31 from CAZY comprises enzymes with several known activities; alpha-glucosidase (3.2.1.20 from EC), alpha-galactosidase (3.2.1.22 from EC); glucoamylase (3.2.1.3 from EC), sucrase-isomaltase (3.2.1.48 from EC); isomaltase (3.2.1.10 from EC); alpha-xylosidase (3.2.1 from EC); alpha-glucan lyase (4.2.2.13 from EC). Glycoside hydrolase family 31 groups a number of glycosyl hydrolases on the basis of sequence similarities [, , ] An aspartic acid has been implicated [] in the catalytic activity of sucrase, isomaltase, and lysosomal alpha-glucosidase.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3L4U_A 3L4X_A 3L4W_A 3L4V_A 3CTT_A 2QMJ_A 2QLY_A 3L4Z_A 3L4Y_A 3L4T_A ....
Probab=24.48 E-value=2.4e+02 Score=27.36 Aligned_cols=25 Identities=24% Similarity=0.417 Sum_probs=20.2
Q ss_pred CCChhhHHHHHHHHHcCeEEEEEeC
Q 023352 174 PPLPESLKLYKKLLLLGIKIVFLTG 198 (283)
Q Consensus 174 ~~ipga~eLl~~L~~~GikI~ivTg 198 (283)
..+|...++++.|+++|+++++...
T Consensus 80 ~~FPd~~~~~~~l~~~G~~~~~~~~ 104 (441)
T PF01055_consen 80 ERFPDPKQMIDELHDQGIKVVLWVH 104 (441)
T ss_dssp TTTTTHHHHHHHHHHTT-EEEEEEE
T ss_pred ccccchHHHHHhHhhCCcEEEEEee
Confidence 4678999999999999999886654
No 310
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=24.41 E-value=77 Score=23.86 Aligned_cols=23 Identities=17% Similarity=0.333 Sum_probs=18.9
Q ss_pred CCceeEEEecccccccCCccccc
Q 023352 129 DGKNIWVFDIDETSLSNLPYYAK 151 (283)
Q Consensus 129 ~~~~avVFDIDgTLldn~~y~~~ 151 (283)
...-.++++-|||.+++..|+..
T Consensus 38 ~~~~~lvL~eDGTeVddEeYF~t 60 (78)
T cd01615 38 SAPVTLVLEEDGTEVDDEEYFQT 60 (78)
T ss_pred CCCeEEEEeCCCcEEccHHHHhc
Confidence 45667999999999999887754
No 311
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=24.40 E-value=54 Score=30.44 Aligned_cols=54 Identities=7% Similarity=0.154 Sum_probs=43.0
Q ss_pred cCCchhhhhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhc
Q 023352 158 PYNPTLFNEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHA 214 (283)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~ 214 (283)
+|+....++.+.........|..+++..|+++++++++.|..- -+.++..+++.
T Consensus 122 ~f~k~~I~~~Va~s~i~lReg~~~ff~~L~~~~IP~~iFSAGi---gdiiEev~~q~ 175 (298)
T KOG3128|consen 122 GFSKNAIDDIVAESNIALREGYEEFFEALQAHEIPLLIFSAGI---GDIIEEVTRQK 175 (298)
T ss_pred CcCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCceEEEecch---HHHHHHHHHHH
Confidence 3566667778888888888999999999999999999999987 44555555543
No 312
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=24.10 E-value=34 Score=25.83 Aligned_cols=21 Identities=19% Similarity=0.313 Sum_probs=17.8
Q ss_pred ceeEEEecccccccCCccccc
Q 023352 131 KNIWVFDIDETSLSNLPYYAK 151 (283)
Q Consensus 131 ~~avVFDIDgTLldn~~y~~~ 151 (283)
+..++++-|||.+++..|+..
T Consensus 39 ~~~lvL~eDGT~Vd~EeyF~t 59 (79)
T cd06538 39 ISSLVLDEDGTGVDTEEFFQA 59 (79)
T ss_pred ccEEEEecCCcEEccHHHHhh
Confidence 467999999999999887754
No 313
>PHA03072 putative viral membrane protein; Provisional
Probab=23.75 E-value=1.3e+02 Score=26.24 Aligned_cols=47 Identities=13% Similarity=0.213 Sum_probs=33.1
Q ss_pred hhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhh
Q 023352 165 NEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWE 220 (283)
Q Consensus 165 ~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~ 220 (283)
+-|+....++.=|.+.++.+++...+..=.+ .--.+.+...||.+|+
T Consensus 130 DgWmvkKA~k~D~sAqQFCey~i~~~~~n~i---------TCG~~M~n~lGYSGYF 176 (190)
T PHA03072 130 DGWMVKKAAKVDPSAQQFCEYLIKHKSNNVI---------TCGLEMMNELGYSGYF 176 (190)
T ss_pred CceeEeeccccCccHHHHHHHHHHccCCCEE---------eehHHHHHhcCcceee
Confidence 4576666778889999999998865432222 2235788889999875
No 314
>KOG2599 consensus Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme transport and metabolism]
Probab=23.32 E-value=1.5e+02 Score=27.72 Aligned_cols=107 Identities=19% Similarity=0.197 Sum_probs=61.5
Q ss_pred eeeeccccccccchhhhhhhhhhccccccccchhhhHhHHHHHHhhhhhccCCCceeEEEecccccccCCccccccC---
Q 023352 77 GVETNNVIGWATVPEKCAGYVGHYMLGQQYRMDSEVVANEAILYAQSLKLAGDGKNIWVFDIDETSLSNLPYYAKNG--- 153 (283)
Q Consensus 77 ~vE~~n~~~~~~~p~~c~~~v~~y~~~~~Y~~D~~~v~~~a~~y~~~~~~~~~~~~avVFDIDgTLldn~~y~~~~~--- 153 (283)
+.+.||...+..+ ...| ..+... .+....+.++++. .+++-.||+| =++=||-.+|....
T Consensus 73 gl~~nn~~~Y~~v-------LTGY------~~n~~~-l~~i~~iv~~lk~-~np~~~wv~D--PVmGDnG~lYV~eelip 135 (308)
T KOG2599|consen 73 GLLLNNLNKYDAV-------LTGY------LPNVSF-LQKIADIVKKLKK-KNPNLTWVCD--PVMGDNGRLYVPEELIP 135 (308)
T ss_pred HHhhcccccccee-------eeec------cCChhH-HHHHHHHHHHHHh-cCCCeEEEeC--ccccCCccEeccHHHHH
Confidence 4577888777654 2222 233222 2334444555552 3445566665 66667766664421
Q ss_pred ------CC-cccCCchhhhhhhh-cCCCCCChhhHHHHHHHHHcCeEEEEEeCCC
Q 023352 154 ------FG-VKPYNPTLFNEWVN-TGKAPPLPESLKLYKKLLLLGIKIVFLTGRP 200 (283)
Q Consensus 154 ------~g-~~~~~~~~~~~~~~-~~~~~~ipga~eLl~~L~~~GikI~ivTgR~ 200 (283)
.. ..-.+|..|+.=.- .....-...+++.++.|+++|++.++||+-.
T Consensus 136 vYr~~i~~ladiiTPNqFE~EiLtg~~I~t~eda~~a~~~lhq~~v~~vVITS~~ 190 (308)
T KOG2599|consen 136 VYRDLIIPLADIITPNQFEAEILTGMEIRTEEDAKRAVEKLHQKGVKTVVITSFD 190 (308)
T ss_pred HHHHhhcchhhhcCCcchhhhhhcCCeeccHHHHHHHHHHHHHhCCCEEEEEeee
Confidence 00 11123334432221 2345677899999999999999999999976
No 315
>cd06414 GH25_LytC-like The LytC lysozyme of Streptococcus pneumoniae is a bacterial cell wall hydrolase that cleaves the beta1-4-glycosydic bond located between the N-acetylmuramoyl-N-glucosaminyl residues of the cell wall polysaccharide chains. LytC is composed of a C-terminal glycosyl hydrolase family 25 (GH25) domain and an N-terminal choline-binding module (CBM) consisting of eleven homologous repeats that specifically recognizes the choline residues of pneumococcal lipoteichoic and teichoic acids. This domain arrangement is the reverse of the major pneumococcal autolysin, LytA, and the CPL-1-like lytic enzymes of the pneumococcal bacteriophages, in which the CBM (consisting of six repeats) is at the C-terminus. This model represents the C-terminal catalytic domain of the LytC-like enzymes.
Probab=23.22 E-value=1.1e+02 Score=26.23 Aligned_cols=68 Identities=9% Similarity=-0.028 Sum_probs=43.3
Q ss_pred hhhHhHHHHHHhhhhhccCCCceeEEEecccccccCCccccccCCCcccCCchhhhhhhhcCCCCCChhhHHHHHHHHHc
Q 023352 110 SEVVANEAILYAQSLKLAGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAPPLPESLKLYKKLLLL 189 (283)
Q Consensus 110 ~~~v~~~a~~y~~~~~~~~~~~~avVFDIDgTLldn~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~ipga~eLl~~L~~~ 189 (283)
.....+||..+.+.++..+ +...+++|++.+-..+. ..+ .......+.++++.+++.
T Consensus 69 ~~~a~~qA~~f~~~~~~~~-~~~~~~lD~E~~~~~~~-----------~~~-----------~~~~~~~~~~f~~~v~~~ 125 (191)
T cd06414 69 VAEAREEAEFVLRLIKGYK-LSYPVYYDLEDETQLGA-----------GLS-----------KDQRTDIANAFCETIEAA 125 (191)
T ss_pred HHHHHHHHHHHHHHhhccC-CCCCeEEEeecCCCCCC-----------CCC-----------HHHHHHHHHHHHHHHHHc
Confidence 3445678888887776432 22346789987532110 000 112335568899999999
Q ss_pred CeEEEEEeCCC
Q 023352 190 GIKIVFLTGRP 200 (283)
Q Consensus 190 GikI~ivTgR~ 200 (283)
|++++|=|++.
T Consensus 126 G~~~~iY~~~~ 136 (191)
T cd06414 126 GYYPGIYANLS 136 (191)
T ss_pred CCCeEEEecHH
Confidence 99999999987
No 316
>cd01421 IMPCH Inosine monophosphate cyclohydrolase domain. This is the N-terminal domain in the purine biosynthesis pathway protein ATIC (purH). The bifunctional ATIC protein contains a C-terminal ATIC formylase domain that formylates 5-aminoimidazole-4-carboxamide-ribonucleotide. The IMPCH domain then converts the formyl-5-aminoimidazole-4-carboxamide-ribonucleotide to inosine monophosphate. This is the final step in de novo purine production.
Probab=23.17 E-value=79 Score=27.74 Aligned_cols=35 Identities=34% Similarity=0.457 Sum_probs=28.6
Q ss_pred ChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchh
Q 023352 176 LPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDT 218 (283)
Q Consensus 176 ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~ 218 (283)
.+++.++.+.|.+.|++|+ .|+. |.++|+..|++.
T Consensus 10 K~~l~~lAk~L~~lGf~I~-AT~G-------TAk~L~e~GI~v 44 (187)
T cd01421 10 KTGLVEFAKELVELGVEIL-STGG-------TAKFLKEAGIPV 44 (187)
T ss_pred cccHHHHHHHHHHCCCEEE-EccH-------HHHHHHHcCCeE
Confidence 5788999999999999995 6653 578888888853
No 317
>PF03356 Pox_LP_H2: Viral late protein H2; InterPro: IPR005023 This entry represents the late protein H2 found in Vaccinia and other poxviruses. This protein is a highly conserved viral membrane protein found in all sequenced poxviruses, containing an N-terminal transmembrane domain and four conserved cysteines thought to be involved in the formation of intramolecular disulphide bonds []. H2 has been shown to be necessary for entry into the host cell and virus-induced cell-cell fusion, but is not required for virus morphogenesis or the attachment of virus particles to cells. It is part of an entry-fusion complex composed of eight viral membrane proteins [].
Probab=22.29 E-value=1.4e+02 Score=26.01 Aligned_cols=47 Identities=11% Similarity=0.188 Sum_probs=32.9
Q ss_pred hhhhhcCCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhh
Q 023352 165 NEWVNTGKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWE 220 (283)
Q Consensus 165 ~~~~~~~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~ 220 (283)
+-|+....++.=|.+.++.+++...+..=.+ .--.+.+...||.+|+
T Consensus 130 DgWmvkKA~kvD~sAqQFCey~i~~~~~n~i---------TCG~~M~~~lGYSGYF 176 (189)
T PF03356_consen 130 DGWMVKKAAKVDPSAQQFCEYLIKNNSDNTI---------TCGLDMMNELGYSGYF 176 (189)
T ss_pred CceeEeeccccCccHHHHHHHHHHccCCCEE---------eehHHHHHhcCcceee
Confidence 4566666677889999999998865432222 2225688889999875
No 318
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=22.03 E-value=1.2e+02 Score=24.79 Aligned_cols=81 Identities=10% Similarity=0.099 Sum_probs=41.9
Q ss_pred hHHHHHHHHHcCeEEEEEeCCCc---ccccccHhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCceEecc
Q 023352 179 SLKLYKKLLLLGIKIVFLTGRPE---DQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGN 255 (283)
Q Consensus 179 a~eLl~~L~~~GikI~ivTgR~e---~~r~~T~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~iv~~ 255 (283)
..++++..++.+..++.+|+=.. .....+.+.|++.|+.. ..+++.+.-.-+..+. ...+.++.+.|+.-++-
T Consensus 39 ~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl~~-v~vivGG~~~i~~~d~---~~~~~~L~~~Gv~~vf~ 114 (128)
T cd02072 39 QEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGLKD-ILLYVGGNLVVGKQDF---EDVEKRFKEMGFDRVFA 114 (128)
T ss_pred HHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCCCC-CeEEEECCCCCChhhh---HHHHHHHHHcCCCEEEC
Confidence 34566666777777777766332 22345566677777754 4445544311111000 12234566667766665
Q ss_pred Cccchhhh
Q 023352 256 IGDQWSDL 263 (283)
Q Consensus 256 IGDq~sDl 263 (283)
-|+...++
T Consensus 115 pgt~~~~i 122 (128)
T cd02072 115 PGTPPEEA 122 (128)
T ss_pred cCCCHHHH
Confidence 56655444
No 319
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=21.82 E-value=91 Score=29.32 Aligned_cols=76 Identities=16% Similarity=0.095 Sum_probs=37.4
Q ss_pred HHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchhhhhhhhcccC----CCCceeEEeechhhhHhhhhCceEeccC
Q 023352 181 KLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSS----HSGETAVVYKSSERKKLEMKGYRIIGNI 256 (283)
Q Consensus 181 eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr~~~----~~~KP~~~yK~~~r~~l~~~gy~iv~~I 256 (283)
..+++|+++|++++ .+-. +..+...-.++.+|.+.-..-.++..+ +...|.+.--...-+++.++||.+ +++
T Consensus 44 ~vv~~L~~~GV~~v--~~~~-~v~~~~~ViirAHGv~~~~~~~~~~~g~~viDaTCP~V~k~~~~v~~~~~~Gy~v-vi~ 119 (298)
T PRK01045 44 YVVERLEKKGAIFV--EELD-EVPDGAIVIFSAHGVSPAVREEAKERGLTVIDATCPLVTKVHKEVARMSREGYEI-ILI 119 (298)
T ss_pred HHHHHHHHCCCEEe--cCcc-cCCCCCEEEEeCCCCCHHHHHHHHHCCCeEEeCCCccchHHHHHHHHHHhCCCEE-EEE
Confidence 35677888888655 3322 111122345677788763222222221 233343311122233445678875 558
Q ss_pred ccch
Q 023352 257 GDQW 260 (283)
Q Consensus 257 GDq~ 260 (283)
||.-
T Consensus 120 G~~~ 123 (298)
T PRK01045 120 GHKG 123 (298)
T ss_pred eCCC
Confidence 8876
No 320
>cd03012 TlpA_like_DipZ_like TlpA-like family, DipZ-like subfamily; composed uncharacterized proteins containing a TlpA-like TRX domain. Some members show domain architectures similar to that of E. coli DipZ protein (also known as DsbD). The only eukaryotic members of the TlpA family belong to this subfamily. TlpA is a disulfide reductase known to have a crucial role in the biogenesis of cytochrome aa3.
Probab=21.39 E-value=82 Score=24.66 Aligned_cols=43 Identities=16% Similarity=0.145 Sum_probs=31.0
Q ss_pred CChhhHHHHHHHHHcCeEEEEEeCCC---cccccccHhhhhhccch
Q 023352 175 PLPESLKLYKKLLLLGIKIVFLTGRP---EDQRNVTEANLKHAGFD 217 (283)
Q Consensus 175 ~ipga~eLl~~L~~~GikI~ivTgR~---e~~r~~T~~~L~~~G~~ 217 (283)
.+|...++.++++++|+.++.++... +...+...+++++.|++
T Consensus 41 ~~p~l~~l~~~~~~~~~~vi~i~~~~~~~~~~~~~~~~~~~~~~~~ 86 (126)
T cd03012 41 TLPYLTDLEQKYKDDGLVVIGVHSPEFAFERDLANVKSAVLRYGIT 86 (126)
T ss_pred HHHHHHHHHHHcCcCCeEEEEeccCccccccCHHHHHHHHHHcCCC
Confidence 47888888998888999999887521 22245566677777775
No 321
>PRK02947 hypothetical protein; Provisional
Probab=21.30 E-value=1e+02 Score=27.76 Aligned_cols=26 Identities=15% Similarity=0.149 Sum_probs=22.9
Q ss_pred ChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 176 LPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 176 ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
-+.+.++++.++++|.+++.+|+...
T Consensus 119 t~~~i~~~~~a~~~g~~vI~iT~~~~ 144 (246)
T PRK02947 119 NPVPIEMALEAKERGAKVIAVTSLAY 144 (246)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCcc
Confidence 36788999999999999999999863
No 322
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=21.29 E-value=93 Score=27.06 Aligned_cols=49 Identities=24% Similarity=0.248 Sum_probs=31.7
Q ss_pred hhhHHHHHHHHHcCeE-EEEEeCCCcccccccHhhhhhccchhhhhhhhc
Q 023352 177 PESLKLYKKLLLLGIK-IVFLTGRPEDQRNVTEANLKHAGFDTWEKLILK 225 (283)
Q Consensus 177 pga~eLl~~L~~~Gik-I~ivTgR~e~~r~~T~~~L~~~G~~~~~~lilr 225 (283)
....+.++.++++|+. |++=++-.+.+|.-.++...++|+..+..|.-+
T Consensus 75 ~~l~~~l~~~~~~g~~~vv~G~i~sd~~~~~~e~~~~~~gl~~~~PLW~~ 124 (194)
T cd01994 75 EDLKELLRKLKEEGVDAVVFGAILSEYQRTRVERVCERLGLEPLAPLWGR 124 (194)
T ss_pred HHHHHHHHHHHHcCCCEEEECccccHHHHHHHHHHHHHcCCEEEecccCC
Confidence 3444556666666776 344444556778778888888998765555543
No 323
>PF01993 MTD: methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase; InterPro: IPR002844 This archaeal enzyme family is involved in formation of methane from carbon dioxide 1.5.99.9 from EC. The enzyme requires coenzyme F420 [].; GO: 0008901 ferredoxin hydrogenase activity, 0015948 methanogenesis, 0055114 oxidation-reduction process; PDB: 1U6I_D 3IQF_G 1QV9_C 3IQE_F 1U6J_G 3IQZ_D 1U6K_B.
Probab=21.04 E-value=1.5e+02 Score=27.35 Aligned_cols=45 Identities=20% Similarity=0.329 Sum_probs=33.4
Q ss_pred CCCCCChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchh
Q 023352 171 GKAPPLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDT 218 (283)
Q Consensus 171 ~~~~~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~ 218 (283)
+..+..||-...=+.|.++|++.+++|..+.. .....|+..||..
T Consensus 67 sPN~~~PGP~~ARE~l~~~~iP~IvI~D~p~~---k~kd~l~~~g~GY 111 (276)
T PF01993_consen 67 SPNAAAPGPTKAREMLSAKGIPCIVISDAPTK---KAKDALEEEGFGY 111 (276)
T ss_dssp -S-TTSHHHHHHHHHHHHSSS-EEEEEEGGGG---GGHHHHHHTT-EE
T ss_pred CCCCCCCCcHHHHHHHHhCCCCEEEEcCCCch---hhHHHHHhcCCcE
Confidence 45678898888888889999999999998854 2467899988864
No 324
>PF05221 AdoHcyase: S-adenosyl-L-homocysteine hydrolase; InterPro: IPR000043 Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase, 3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. This enzyme is ubiquitous, highly conserved, and may play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. AdoHcyase requires NAD+ as a cofactor and contains a central glycine-rich region which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity, 0006730 one-carbon metabolic process; PDB: 3N58_B 3H9U_C 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 1K0U_F 1B3R_A 1XWF_D ....
Probab=20.88 E-value=1.3e+02 Score=27.99 Aligned_cols=42 Identities=19% Similarity=0.295 Sum_probs=35.5
Q ss_pred hhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccchh
Q 023352 177 PESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFDT 218 (283)
Q Consensus 177 pga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~~ 218 (283)
+.+--|+..|++.|-.|.+.++.+-+.++.+...|.+.|++.
T Consensus 54 ~kTA~L~~tL~a~GAeV~~~~sNplSTQDdvaAAL~~~Gi~V 95 (268)
T PF05221_consen 54 AKTAVLAETLKALGAEVRWTGSNPLSTQDDVAAALAEEGIPV 95 (268)
T ss_dssp HHHHHHHHHHHHTTEEEEEEESSTTT--HHHHHHHHHTTEEE
T ss_pred HHHHHHHHHHHHcCCeEEEecCCCcccchHHHHHhccCCceE
Confidence 456678999999999999999999888899999999999985
No 325
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=20.63 E-value=1.2e+02 Score=26.30 Aligned_cols=28 Identities=21% Similarity=0.260 Sum_probs=24.7
Q ss_pred CChhhHHHHHHHHHcCeEEEEEeCCCcc
Q 023352 175 PLPESLKLYKKLLLLGIKIVFLTGRPED 202 (283)
Q Consensus 175 ~ipga~eLl~~L~~~GikI~ivTgR~e~ 202 (283)
--+.+++.++..+++|.+++.+|||+-.
T Consensus 121 NS~nVl~Ai~~Ak~~gm~vI~ltG~~GG 148 (176)
T COG0279 121 NSKNVLKAIEAAKEKGMTVIALTGKDGG 148 (176)
T ss_pred CCHHHHHHHHHHHHcCCEEEEEecCCCc
Confidence 3478899999999999999999999854
No 326
>PRK11337 DNA-binding transcriptional repressor RpiR; Provisional
Probab=20.45 E-value=1.2e+02 Score=27.68 Aligned_cols=28 Identities=14% Similarity=0.107 Sum_probs=24.4
Q ss_pred CCChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 174 PPLPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 174 ~~ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
.-.+.+.++++.++++|.+++.+|+.+.
T Consensus 198 G~t~~~~~~~~~ak~~g~~ii~IT~~~~ 225 (292)
T PRK11337 198 GRTSDVIEAVELAKKNGAKIICITNSYH 225 (292)
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 3457799999999999999999999874
No 327
>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD.
Probab=20.45 E-value=1.6e+02 Score=24.73 Aligned_cols=26 Identities=15% Similarity=0.142 Sum_probs=22.4
Q ss_pred CChhhHHHHHHHHHcCeEEEEEeCCC
Q 023352 175 PLPESLKLYKKLLLLGIKIVFLTGRP 200 (283)
Q Consensus 175 ~ipga~eLl~~L~~~GikI~ivTgR~ 200 (283)
..|...++++.+++.|+.+.+.||..
T Consensus 75 l~~~l~~li~~~~~~g~~v~i~TNg~ 100 (191)
T TIGR02495 75 LQAGLPDFLRKVRELGFEVKLDTNGS 100 (191)
T ss_pred CcHhHHHHHHHHHHCCCeEEEEeCCC
Confidence 34567899999999999999999987
No 328
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=20.39 E-value=1.7e+02 Score=24.20 Aligned_cols=83 Identities=11% Similarity=0.115 Sum_probs=44.2
Q ss_pred hhHHHHHHHHHcCeEEEEEeCCCccc---ccccHhhhhhccchhhhhhhhcccCCCCceeEEeechhhhHhhhhCceEec
Q 023352 178 ESLKLYKKLLLLGIKIVFLTGRPEDQ---RNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIG 254 (283)
Q Consensus 178 ga~eLl~~L~~~GikI~ivTgR~e~~---r~~T~~~L~~~G~~~~~~lilr~~~~~~KP~~~yK~~~r~~l~~~gy~iv~ 254 (283)
...++++..++.+..++-+|+..... -..+.+.|++.|+.. ..+++.+...-+.++. ...+.++++.|+.-++
T Consensus 40 ~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~-~~vivGG~~vi~~~d~---~~~~~~l~~~Gv~~vF 115 (134)
T TIGR01501 40 PQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEG-ILLYVGGNLVVGKQDF---PDVEKRFKEMGFDRVF 115 (134)
T ss_pred CHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCC-CEEEecCCcCcChhhh---HHHHHHHHHcCCCEEE
Confidence 34566777777788888877765322 234556677777754 2333444211111010 1223456667776666
Q ss_pred cCccchhhhc
Q 023352 255 NIGDQWSDLL 264 (283)
Q Consensus 255 ~IGDq~sDl~ 264 (283)
-=|+.+.++.
T Consensus 116 ~pgt~~~~iv 125 (134)
T TIGR01501 116 APGTPPEVVI 125 (134)
T ss_pred CcCCCHHHHH
Confidence 5566555543
No 329
>PLN03190 aminophospholipid translocase; Provisional
Probab=20.36 E-value=1.1e+02 Score=34.25 Aligned_cols=30 Identities=23% Similarity=0.227 Sum_probs=27.5
Q ss_pred CCCCChhhHHHHHHHHHcCeEEEEEeCCCc
Q 023352 172 KAPPLPESLKLYKKLLLLGIKIVFLTGRPE 201 (283)
Q Consensus 172 ~~~~ipga~eLl~~L~~~GikI~ivTgR~e 201 (283)
+.++.+++.+.++.|++.|+++.++||-..
T Consensus 724 ~D~lr~~v~~~I~~l~~agi~v~mlTGD~~ 753 (1178)
T PLN03190 724 EDKLQQGVPEAIESLRTAGIKVWVLTGDKQ 753 (1178)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEECCCCH
Confidence 468999999999999999999999999764
No 330
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=20.35 E-value=1.3e+02 Score=23.68 Aligned_cols=25 Identities=20% Similarity=0.266 Sum_probs=19.4
Q ss_pred hHHHHHHHHHcCeEEEEEeCCCccc
Q 023352 179 SLKLYKKLLLLGIKIVFLTGRPEDQ 203 (283)
Q Consensus 179 a~eLl~~L~~~GikI~ivTgR~e~~ 203 (283)
+.++.+.|.++|+++.++|.+....
T Consensus 18 ~~~l~~~l~~~G~~v~v~~~~~~~~ 42 (177)
T PF13439_consen 18 VLNLARALAKRGHEVTVVSPGVKDP 42 (177)
T ss_dssp HHHHHHHHHHTT-EEEEEESS-TTS
T ss_pred HHHHHHHHHHCCCEEEEEEcCCCcc
Confidence 5688999999999999999887543
No 331
>cd03018 PRX_AhpE_like Peroxiredoxin (PRX) family, AhpE-like subfamily; composed of proteins similar to Mycobacterium tuberculosis AhpE. AhpE is described as a 1-cys PRX because of the absence of a resolving cysteine. The structure and sequence of AhpE, however, show greater similarity to 2-cys PRXs than 1-cys PRXs. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. The first step of catalysis is the nucleophilic attack by the peroxidatic cysteine on the peroxide leading to the formation of a cysteine sulfenic acid intermediate. The absence of a resolving cysteine suggests that functional AhpE is regenerated by an external reductant. The solution behavior and crystal structure of AhpE show that it forms dimers and octamers.
Probab=20.20 E-value=1.2e+02 Score=24.20 Aligned_cols=40 Identities=10% Similarity=0.001 Sum_probs=29.6
Q ss_pred CChhhHHHHHHHHHcCeEEEEEeCCCcccccccHhhhhhccch
Q 023352 175 PLPESLKLYKKLLLLGIKIVFLTGRPEDQRNVTEANLKHAGFD 217 (283)
Q Consensus 175 ~ipga~eLl~~L~~~GikI~ivTgR~e~~r~~T~~~L~~~G~~ 217 (283)
-+|...++++.++++|+.++.||..+ .+...+++++.+++
T Consensus 47 ~~~~l~~~~~~~~~~~v~vi~vs~d~---~~~~~~~~~~~~~~ 86 (149)
T cd03018 47 ELCALRDSLELFEAAGAEVLGISVDS---PFSLRAWAEENGLT 86 (149)
T ss_pred HHHHHHHHHHHHHhCCCEEEEecCCC---HHHHHHHHHhcCCC
Confidence 56777888888988999999998755 33455667766664
Done!