Your job contains 1 sequence.
>023354
MASHDHHTHDHAHHHHHDNDHDHTHEKNHGDSTATSWVGSDGRVYHSHDGLAPHSHEPIY
SPGYFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFT
KEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKADLLLCESGG
DNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGADLAVME
RDALRMRDGGPFIFAQVKHGLGVEEIVNHILQAWEASTGKKRR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023354
(283 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2040894 - symbol:UREG "AT2G34470" species:3702... 1220 3.9e-124 1
UNIPROTKB|G4NCH0 - symbol:MGG_01086 "Uncharacterized prot... 851 1.9e-89 2
ASPGD|ASPL0000062920 - symbol:ureD species:162425 "Emeric... 831 6.4e-83 1
POMBASE|SPCPB16A4.05c - symbol:SPCPB16A4.05c "urease acce... 788 3.6e-80 2
UNIPROTKB|Q48DC7 - symbol:ureG "Urease accessory protein ... 607 3.5e-59 1
UNIPROTKB|P18319 - symbol:ureG "Urease accessory protein ... 566 7.8e-55 1
TIGR_CMR|SPO_1717 - symbol:SPO_1717 "urease accessory pro... 560 3.4e-54 1
UNIPROTKB|P0A664 - symbol:ureG "Urease accessory protein ... 559 4.3e-54 1
TIGR_CMR|CJE_0726 - symbol:CJE_0726 "hydrogenase accessor... 135 5.5e-07 1
TIGR_CMR|GSU_0305 - symbol:GSU_0305 "hydrogenase accessor... 128 4.2e-06 1
TIGR_CMR|CHY_1541 - symbol:CHY_1541 "hydrogenase accessor... 126 4.3e-06 1
TIGR_CMR|DET_1431 - symbol:DET_1431 "hydrogenase accessor... 111 0.00028 1
>TAIR|locus:2040894 [details] [associations]
symbol:UREG "AT2G34470" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM;IEA] [GO:0016151 "nickel cation binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=ISS] [GO:0006807 "nitrogen
compound metabolic process" evidence=IMP] [GO:0048554 "positive
regulation of metalloenzyme activity" evidence=IMP] [GO:0016020
"membrane" evidence=IDA] HAMAP:MF_01389 InterPro:IPR004400
InterPro:IPR012202 PIRSF:PIRSF005624 Pfam:PF02492 GO:GO:0005524
GO:GO:0005737 EMBL:CP002685 GO:GO:0016020 GO:GO:0003924
GO:GO:0006807 GO:GO:0016151 GO:GO:0048554 InterPro:IPR003495
GO:GO:0016530 TIGRFAMs:TIGR00101 KO:K03189 OMA:LCKAMRE
UniGene:At.48549 UniGene:At.60259 IPI:IPI00656728
RefSeq:NP_001031481.1 ProteinModelPortal:F4IHW4 SMR:F4IHW4
PRIDE:F4IHW4 EnsemblPlants:AT2G34470.2 GeneID:818010
KEGG:ath:AT2G34470 PhylomeDB:F4IHW4 Uniprot:F4IHW4
Length = 276
Score = 1220 (434.5 bits), Expect = 3.9e-124, P = 3.9e-124
Identities = 228/257 (88%), Positives = 245/257 (95%)
Query: 27 KNHGDSTATSWVGSDGRVYHSHDGLAPHSHEPIYSPGYFSRRAPPILSRNFNERAFTVGI 86
K+ G SWVG DG+VYHSHDGLAPHSHEPIYSPGYFSRRAPP+ RNF+ERAFTVGI
Sbjct: 20 KSDGGEGKASWVGKDGKVYHSHDGLAPHSHEPIYSPGYFSRRAPPLHDRNFSERAFTVGI 79
Query: 87 GGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGC 146
GGPVGTGKTALMLALC+FLRDKYSLAAVTNDIFTKEDGEFL++NGALPEERIRAVETGGC
Sbjct: 80 GGPVGTGKTALMLALCRFLRDKYSLAAVTNDIFTKEDGEFLVKNGALPEERIRAVETGGC 139
Query: 147 PHAAIREDISINLGPLEELSNLFKADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDK 206
PHAAIREDISINLGPLEELSNLFKADLLLCESGGDNLAANFSRELADYIIYIIDVS GDK
Sbjct: 140 PHAAIREDISINLGPLEELSNLFKADLLLCESGGDNLAANFSRELADYIIYIIDVSAGDK 199
Query: 207 IPRKGGPGITQADLLVINKTDLASAIGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEI 266
IPRKGGPGITQADLLVINKTDLA+A+GADL+VMERD+LRMRDGGPF+FAQVKHGLGVEEI
Sbjct: 200 IPRKGGPGITQADLLVINKTDLAAAVGADLSVMERDSLRMRDGGPFVFAQVKHGLGVEEI 259
Query: 267 VNHILQAWEASTGKKRR 283
VNH++ +WE +TGKKR+
Sbjct: 260 VNHVMHSWEHATGKKRQ 276
>UNIPROTKB|G4NCH0 [details] [associations]
symbol:MGG_01086 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] HAMAP:MF_01389 InterPro:IPR004400 InterPro:IPR012202
PIRSF:PIRSF005624 Pfam:PF02492 GO:GO:0005524 GO:GO:0005737
EMBL:CM001235 GO:GO:0003924 GO:GO:0016151 InterPro:IPR003495
GO:GO:0016530 TIGRFAMs:TIGR00101 KO:K03189 RefSeq:XP_003717851.1
ProteinModelPortal:G4NCH0 EnsemblFungi:MGG_01086T0 GeneID:2674150
KEGG:mgr:MGG_01086 Uniprot:G4NCH0
Length = 277
Score = 851 (304.6 bits), Expect = 1.9e-89, Sum P(2) = 1.9e-89
Identities = 170/240 (70%), Positives = 192/240 (80%)
Query: 46 HSHDGLA------PHSHEPIYSPG-YFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALM 98
HSHDG HSHE + PG Y R P + R+F+ERAFT+GIGGPVG+GKTALM
Sbjct: 15 HSHDGSTFNAQEHGHSHEILTGPGSYLGREMPIVEGRDFSERAFTIGIGGPVGSGKTALM 74
Query: 99 LALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISIN 158
LALC LRD +SLAAVTNDIFT+ED EFL RN ALP RIRA+ETGGCPHAA+REDIS N
Sbjct: 75 LALCLALRDTHSLAAVTNDIFTREDAEFLTRNKALPPSRIRAIETGGCPHAAVREDISAN 134
Query: 159 LGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQ 217
L LE+L F DLLL ESGGDNLAAN+SRELAD+IIY+IDVSGGDKIPRKGGPGITQ
Sbjct: 135 LACLEDLHRTFNGVDLLLIESGGDNLAANYSRELADFIIYVIDVSGGDKIPRKGGPGITQ 194
Query: 218 ADLLVINKTDLASAIGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQAWEAS 277
+DLLV+NKTDLA +GADL VMERDA +MR+GGP +FAQVK +GVE IVN IL AW+AS
Sbjct: 195 SDLLVVNKTDLAEIVGADLGVMERDARKMREGGPTVFAQVKKSVGVEHIVNLILSAWKAS 254
Score = 61 (26.5 bits), Expect = 1.9e-89, Sum P(2) = 1.9e-89
Identities = 10/11 (90%), Positives = 10/11 (90%)
Query: 46 HSHDGLAPHSH 56
HSHDG APHSH
Sbjct: 5 HSHDGSAPHSH 15
>ASPGD|ASPL0000062920 [details] [associations]
symbol:ureD species:162425 "Emericella nidulans"
[GO:0043419 "urea catabolic process" evidence=IMP] [GO:0009039
"urease activity" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016151 "nickel cation binding" evidence=IEA]
HAMAP:MF_01389 InterPro:IPR004400 InterPro:IPR012202
PIRSF:PIRSF005624 Pfam:PF02492 GO:GO:0005524 GO:GO:0005737
EMBL:BN001308 GO:GO:0003924 GO:GO:0016151 InterPro:IPR003495
EMBL:AACD01000005 GO:GO:0016530 eggNOG:COG0378 TIGRFAMs:TIGR00101
HOGENOM:HOG000236979 KO:K03189 OMA:LCKAMRE OrthoDB:EOG47H8ZZ
RefSeq:XP_657836.1 ProteinModelPortal:Q5BGU8 STRING:Q5BGU8
EnsemblFungi:CADANIAT00002494 GeneID:2876005 KEGG:ani:AN0232.2
Uniprot:Q5BGU8
Length = 266
Score = 831 (297.6 bits), Expect = 6.4e-83, P = 6.4e-83
Identities = 160/235 (68%), Positives = 194/235 (82%)
Query: 46 HSHDGLAPH--SHEPIYSPG-YFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALC 102
HSHD +A H SHE + PG Y +R P I R++++RAFT+GIGGPVG+GKTALMLALC
Sbjct: 9 HSHDNIADHGHSHEILDGPGSYLNREQPLIEDRDWSDRAFTIGIGGPVGSGKTALMLALC 68
Query: 103 KFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPL 162
+ LRD+Y++AAVTNDIFT+ED EFL RN AL +RIRA+ETGGCPHAA+REDIS NL L
Sbjct: 69 RALRDEYNIAAVTNDIFTREDAEFLTRNKALSPDRIRAIETGGCPHAAVREDISANLLAL 128
Query: 163 EELSNLFKADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLV 222
+ L F+ DLLL ESGGDNLAAN+SRELAD+IIY+IDV+GGDK+PRKGGPGIT +DLLV
Sbjct: 129 QNLHRQFQTDLLLIESGGDNLAANYSRELADFIIYVIDVAGGDKVPRKGGPGITGSDLLV 188
Query: 223 INKTDLASAIGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQAWEAS 277
+NK DLA A+GAD++VMERDA +MR+GGP +FA VK GV+ IVN IL AW+AS
Sbjct: 189 VNKIDLAEAVGADISVMERDAAKMREGGPTVFAVVKKDQGVDHIVNLILSAWKAS 243
>POMBASE|SPCPB16A4.05c [details] [associations]
symbol:SPCPB16A4.05c "urease accessory protein UREG
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003924
"GTPase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0016151
"nickel cation binding" evidence=IEA] [GO:0016530 "metallochaperone
activity" evidence=IEA] [GO:0019627 "urea metabolic process"
evidence=ISM] [GO:0042803 "protein homodimerization activity"
evidence=IEA] InterPro:IPR004400 InterPro:IPR012202
PIRSF:PIRSF005624 PomBase:SPCPB16A4.05c Pfam:PF02492 GO:GO:0005525
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329672
GO:GO:0003924 GO:GO:0016151 InterPro:IPR003495 GO:GO:0019627
GO:GO:0016530 eggNOG:COG0378 TIGRFAMs:TIGR00101
HOGENOM:HOG000236979 KO:K03189 RefSeq:NP_588029.1
ProteinModelPortal:Q96WV0 STRING:Q96WV0 PRIDE:Q96WV0
EnsemblFungi:SPCPB16A4.05c.1 GeneID:2538808 KEGG:spo:SPCPB16A4.05c
OMA:HILQAWE OrthoDB:EOG47H8ZZ NextBio:20799990 Uniprot:Q96WV0
Length = 286
Score = 788 (282.4 bits), Expect = 3.6e-80, Sum P(2) = 3.6e-80
Identities = 149/229 (65%), Positives = 188/229 (82%)
Query: 54 HSHEPIYSPG-YFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLA 112
HSH+ + +PG Y R P R+F+ RAFT+G+GGPVG+GKTAL+L LC+ L +KYS+
Sbjct: 58 HSHDAMETPGSYLKRELPQFNHRDFSRRAFTIGVGGPVGSGKTALLLQLCRLLGEKYSIG 117
Query: 113 AVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKAD 172
VTNDIFT+ED EFL+RN ALPEERIRA+ETGGCPHAAIRED+S NL LEEL + F +
Sbjct: 118 VVTNDIFTREDQEFLIRNKALPEERIRAIETGGCPHAAIREDVSGNLVALEELQSEFNTE 177
Query: 173 LLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAI 232
LLL ESGGDNLAAN+SR+LAD+IIY+IDVSGGDKIPRKGGPGIT++DLL+INKTDLA +
Sbjct: 178 LLLVESGGDNLAANYSRDLADFIIYVIDVSGGDKIPRKGGPGITESDLLIINKTDLAKLV 237
Query: 233 GADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIVNHILQAWEASTGKK 281
GADL+VM+RDA ++R+ GP +FAQVK+ +G++EI IL A +++ K
Sbjct: 238 GADLSVMDRDAKKIRENGPIVFAQVKNQVGMDEITELILGAAKSAGALK 286
Score = 36 (17.7 bits), Expect = 3.6e-80, Sum P(2) = 3.6e-80
Identities = 6/12 (50%), Positives = 7/12 (58%)
Query: 46 HSHDGLAPHSHE 57
H H G HSH+
Sbjct: 27 HDHHGHDHHSHD 38
>UNIPROTKB|Q48DC7 [details] [associations]
symbol:ureG "Urease accessory protein UreG" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0016530
"metallochaperone activity" evidence=ISS] HAMAP:MF_01389
InterPro:IPR004400 InterPro:IPR012202 PIRSF:PIRSF005624
Pfam:PF02492 GO:GO:0005525 GO:GO:0005524 GO:GO:0005737
GO:GO:0003924 EMBL:CP000058 GenomeReviews:CP000058_GR GO:GO:0016151
InterPro:IPR003495 GO:GO:0016530 eggNOG:COG0378 TIGRFAMs:TIGR00101
HOGENOM:HOG000236979 KO:K03189 OMA:LCKAMRE RefSeq:YP_276614.1
ProteinModelPortal:Q48DC7 STRING:Q48DC7 GeneID:3555490
KEGG:psp:PSPPH_4498 PATRIC:19978495 ProtClustDB:CLSK868971
Uniprot:Q48DC7
Length = 205
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 119/194 (61%), Positives = 148/194 (76%)
Query: 78 NERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEER 137
N + VGIGGPVG+GKTAL LALC LRD+Y+LA VTNDI+T+ED +FL+RN AL ER
Sbjct: 2 NSQPLRVGIGGPVGSGKTALTLALCLALRDRYNLAVVTNDIYTREDADFLVRNEALAPER 61
Query: 138 IRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYII 196
I VETGGCPH AIRED SINL +++L+ F+ DL++ ESGGDNL+A FS EL+D I
Sbjct: 62 IIGVETGGCPHTAIREDASINLEAVDQLNRRFEGLDLIIVESGGDNLSATFSPELSDLTI 121
Query: 197 YIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGADLAVMERDALRMRDGGPFIFAQ 256
Y+IDVS GDK+PRKGGPGI ++DLLVINK DLA +GA L +M+ D RMR PF+F+
Sbjct: 122 YVIDVSAGDKLPRKGGPGICKSDLLVINKIDLAPLVGASLEMMDSDTRRMRGEKPFVFSN 181
Query: 257 VKHGLGVEEIVNHI 270
K G G+E+I+ I
Sbjct: 182 QKTGQGLEQIIAFI 195
>UNIPROTKB|P18319 [details] [associations]
symbol:ureG "Urease accessory protein UreG" species:548
"Enterobacter aerogenes" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_01389 InterPro:IPR004400 InterPro:IPR012202
PIRSF:PIRSF005624 Pfam:PF02492 GO:GO:0005525 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016151 InterPro:IPR003495
GO:GO:0016530 EMBL:M36068 ProteinModelPortal:P18319
TIGRFAMs:TIGR00101 Uniprot:P18319
Length = 205
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 115/193 (59%), Positives = 136/193 (70%)
Query: 76 NFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPE 135
N + VG+GGPVG+GKTAL+ ALCK +RD + LA VTNDI+TKED L GAL
Sbjct: 2 NSYKHPLRVGVGGPVGSGKTALLEALCKAMRDTWQLAVVTNDIYTKEDQRILTEAGALAP 61
Query: 136 ERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADY 194
ERI VETGGCPH AIRED S+NL +E LS F DL+ ESGGDNL+A FS ELAD
Sbjct: 62 ERIVGVETGGCPHTAIREDASMNLAAVEALSEKFGNLDLIFVESGGDNLSATFSPELADL 121
Query: 195 IIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGADLAVMERDALRMRDGGPFIF 254
IY+IDV+ G+KIPRKGGPGIT++D LVINKTDLA +GA L VM D RMR P+ F
Sbjct: 122 TIYVIDVAEGEKIPRKGGPGITKSDFLVINKTDLAPYVGASLEVMASDTQRMRGDRPWTF 181
Query: 255 AQVKHGLGVEEIV 267
+K G G+ I+
Sbjct: 182 TNLKQGDGLSTII 194
>TIGR_CMR|SPO_1717 [details] [associations]
symbol:SPO_1717 "urease accessory protein UreG"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0019627 "urea
metabolic process" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=ISS] HAMAP:MF_01389 InterPro:IPR004400 InterPro:IPR012202
PIRSF:PIRSF005624 Pfam:PF02492 GO:GO:0005525 GO:GO:0005524
GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003924
GO:GO:0016151 InterPro:IPR003495 GO:GO:0016530 eggNOG:COG0378
TIGRFAMs:TIGR00101 HOGENOM:HOG000236979 KO:K03189 OMA:LCKAMRE
RefSeq:YP_166956.1 ProteinModelPortal:Q5LSP9 DNASU:3193533
GeneID:3193533 KEGG:sil:SPO1717 PATRIC:23376757
ProtClustDB:CLSK933615 Uniprot:Q5LSP9
Length = 215
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 110/185 (59%), Positives = 139/185 (75%)
Query: 84 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVET 143
VGIGGPVG GKT L AL + LRD +S+ +TNDI+T+ED E LMR LP++RI VET
Sbjct: 10 VGIGGPVGAGKTTLTAALSEALRDSHSIGVITNDIYTREDAEALMRLQILPQDRIIGVET 69
Query: 144 GGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIIDVS 202
GGCPH AIRED SINL + E+ +++L ESGGDNL+A FS ELAD +Y+IDV+
Sbjct: 70 GGCPHTAIREDASINLAAVAEMERRHPGIEIILIESGGDNLSATFSPELADVTLYVIDVA 129
Query: 203 GGDKIPRKGGPGITQADLLVINKTDLASAIGADLAVMERDALRMRDGGPFIFAQVKHGLG 262
G++IPRKGGP IT++D+L+INKTDLA +GA L VMERDA RMR G PF+F+ +++ G
Sbjct: 130 AGEEIPRKGGPAITKSDILIINKTDLAPHVGASLEVMERDAGRMRCGRPFVFSSLRNRDG 189
Query: 263 VEEIV 267
V EIV
Sbjct: 190 VAEIV 194
>UNIPROTKB|P0A664 [details] [associations]
symbol:ureG "Urease accessory protein UreG" species:1773
"Mycobacterium tuberculosis" [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0006184 "GTP catabolic process" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
HAMAP:MF_01389 InterPro:IPR004400 InterPro:IPR012202
PIRSF:PIRSF005624 Pfam:PF02492 GO:GO:0005525 GO:GO:0005524
GO:GO:0005737 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0003924 EMBL:BX842578 GO:GO:0016151
InterPro:IPR003495 GO:GO:0016530 eggNOG:COG0378 EMBL:U33011
TIGRFAMs:TIGR00101 PIR:D70665 RefSeq:NP_216368.1 RefSeq:NP_336357.1
RefSeq:YP_006515252.1 ProteinModelPortal:P0A664 SMR:P0A664
PRIDE:P0A664 EnsemblBacteria:EBMYCT00000002943
EnsemblBacteria:EBMYCT00000070999 GeneID:13316643 GeneID:885729
GeneID:923708 KEGG:mtc:MT1900 KEGG:mtu:Rv1852 KEGG:mtv:RVBD_1852
PATRIC:18125941 TubercuList:Rv1852 HOGENOM:HOG000236979 KO:K03189
OMA:LCKAMRE ProtClustDB:CLSK871974 Uniprot:P0A664
Length = 224
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 115/223 (51%), Positives = 149/223 (66%)
Query: 46 HSHDGLAPHSHEPIYSPGYFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFL 105
HSH PHSH P + P+ +G+GGPVG+GKTAL+ ALC+ L
Sbjct: 4 HSH----PHSHTVPARPRRVRKPGEPL----------RIGVGGPVGSGKTALVAALCRQL 49
Query: 106 RDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEEL 165
R + SLA +TNDI+T ED +FL + LP++RI AV+TGGCPH AIR+DI+ NL ++EL
Sbjct: 50 RGELSLAVLTNDIYTTEDADFLRTHAVLPDDRIAAVQTGGCPHTAIRDDITANLDAIDEL 109
Query: 166 SNLFKA-DLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVIN 224
A DL+L ESGGDNL A FS L D I++IDV+GGDK+PRKGGPG+T +DLLV+N
Sbjct: 110 MAAHDALDLILVESGGDNLTATFSSGLVDAQIFVIDVAGGDKVPRKGGPGVTYSDLLVVN 169
Query: 225 KTDLASAIGADLAVMERDALRMRDGGPFIFAQVKHGLGVEEIV 267
KTDLA+ +GADLAVM RDA +RDG P + + ++V
Sbjct: 170 KTDLAALVGADLAVMARDADAVRDGRPTVLQSLTEDPAASDVV 212
>TIGR_CMR|CJE_0726 [details] [associations]
symbol:CJE_0726 "hydrogenase accessory protein HypB"
species:195099 "Campylobacter jejuni RM1221" [GO:0000166
"nucleotide binding" evidence=ISS] [GO:0006464 "cellular protein
modification process" evidence=ISS] [GO:0016530 "metallochaperone
activity" evidence=ISS] InterPro:IPR004392 InterPro:IPR012202
PIRSF:PIRSF005624 Pfam:PF02492 GO:GO:0006461 GO:GO:0003924
GO:GO:0006184 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0016151
InterPro:IPR003495 eggNOG:COG0378 HOGENOM:HOG000236980 KO:K04652
TIGRFAMs:TIGR00073 OMA:QACHLDA RefSeq:YP_178737.1
ProteinModelPortal:Q5HVE8 STRING:Q5HVE8 GeneID:3231952
KEGG:cjr:CJE0726 PATRIC:20043181 ProtClustDB:CLSK871679
BioCyc:CJEJ195099:GJC0-743-MONOMER Uniprot:Q5HVE8
Length = 247
Score = 135 (52.6 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 58/232 (25%), Positives = 96/232 (41%)
Query: 46 HSHDGLAPHSHE-PIYSPGYFSRRAPPILSRN----------FNE-RAFTVGIGGPVGTG 93
H+H H HE P G ILS+N FNE + + G+G
Sbjct: 13 HTHGHHHDHHHENPSLKEGKTIEVISKILSKNDEEAKHNRAHFNEANTLCINLMSSPGSG 72
Query: 94 KTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIRE 153
KT L+ + K L+++ +A + D+ T D + GAL + + TG H
Sbjct: 73 KTTLLESTIKALKNELKIAVIEGDLETNNDALRVKNAGALAYQ----ITTGQSCHL---- 124
Query: 154 DISINLGPLEELSNLFKADLLLCESGGDNLAANFSRELADYI-IYIIDVSGGDKIPRKGG 212
D + L L+ + DLL E+ G NL S +L +++ + ++ ++ G P+K
Sbjct: 125 DAFMVHEALHHLA-IDDVDLLFIENVG-NLVCPASYDLGEHLNVVLLSITEGSDKPQKYP 182
Query: 213 PGITQADLLVINKTDLASAIGADLAVMERDALRMRDGGPFIFAQVKHGLGVE 264
+AD+++I K DLA D+ + I K+G +E
Sbjct: 183 VMFKKADIVLITKADLAHHFDFDIKEATSLIKELNPRADIITLDAKNGTNME 234
>TIGR_CMR|GSU_0305 [details] [associations]
symbol:GSU_0305 "hydrogenase accessory protein HypB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000166
"nucleotide binding" evidence=ISS] [GO:0006457 "protein folding"
evidence=ISS] [GO:0016530 "metallochaperone activity" evidence=ISS]
InterPro:IPR004392 InterPro:IPR012202 PIRSF:PIRSF005624
Pfam:PF02492 GO:GO:0006461 GO:GO:0003924 GO:GO:0006184
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0016151
InterPro:IPR003495 HOGENOM:HOG000236980 KO:K04652 OMA:EAHKVVV
TIGRFAMs:TIGR00073 RefSeq:NP_951365.1 ProteinModelPortal:Q74GE1
GeneID:2686934 KEGG:gsu:GSU0305 PATRIC:22023354
ProtClustDB:CLSK827734 BioCyc:GSUL243231:GH27-244-MONOMER
Uniprot:Q74GE1
Length = 254
Score = 128 (50.1 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 65/236 (27%), Positives = 101/236 (42%)
Query: 45 YHSHDGLAPHSHEPIYSPGYFSRRAP---PILSRN--F--NERA-------FTVGIGGPV 90
+H H HSH + SR+ ILSRN F + RA F + +
Sbjct: 15 HHEHGHGHSHSHGHTHDDERESRKIAVETDILSRNNRFAADNRALFAKKGVFVLNLVSSP 74
Query: 91 GTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETG-GCPHA 149
G+GKT + L D+Y A + D T D + + G +P R + TG GC H
Sbjct: 75 GSGKTTTLERTLGDLSDRYRCAVIEGDQQTDNDAQRIAATG-VPA---RQINTGAGC-HL 129
Query: 150 AIREDISINLGPLEELSNLFKADLLLCESGGDNLAANFSRELADYI-IYIIDVSGGDKIP 208
D + +G E +L DLLL E+ G NL S +L ++ + ++ V+ G+ P
Sbjct: 130 ----DAHM-VGHAAEEFDLDALDLLLVENVG-NLVCPASFDLGEHHKVVVLSVTEGEDKP 183
Query: 209 RKGGPGITQADLLVINKTDLASAIGADLAVMERDALRMRDGGPFIFAQVKHGLGVE 264
K AD++++NK DL + D+ A R+ G + G G++
Sbjct: 184 LKYPNMFHAADVMLLNKIDLLPYVDFDVEKCLEMARRVSPGITIFQVSSRTGEGMD 239
>TIGR_CMR|CHY_1541 [details] [associations]
symbol:CHY_1541 "hydrogenase accessory protein HypB"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000166 "nucleotide binding" evidence=ISS] [GO:0006457 "protein
folding" evidence=ISS] [GO:0016530 "metallochaperone activity"
evidence=ISS] InterPro:IPR004392 InterPro:IPR012202
PIRSF:PIRSF005624 Pfam:PF02492 GO:GO:0006461 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003924 GO:GO:0006184 GO:GO:0016151
InterPro:IPR003495 eggNOG:COG0378 HOGENOM:HOG000236980 KO:K04652
TIGRFAMs:TIGR00073 RefSeq:YP_360373.1 ProteinModelPortal:Q3ABW1
STRING:Q3ABW1 GeneID:3727767 KEGG:chy:CHY_1541 PATRIC:21276211
OMA:KHPMMFR BioCyc:CHYD246194:GJCN-1540-MONOMER Uniprot:Q3ABW1
Length = 220
Score = 126 (49.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 56/210 (26%), Positives = 93/210 (44%)
Query: 73 LSRN-FNER-AFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRN 130
L+R FNE+ F + I G GKT L+ + L A + D+ T +D E + +
Sbjct: 19 LNRKIFNEKNIFVINIISSPGAGKTTLLEKILPKLPPDIKPAVIEGDLTTTKDAERIEKT 78
Query: 131 GALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKADLLLCESGGDNLAANFSRE 190
G + I + GGC H D ++ LE+L L + +LL+ E+ G NL +
Sbjct: 79 GVFALQ-INTL--GGC-HL----DANMINQVLEKLP-LDEINLLIIENVG-NLVCPAGFD 128
Query: 191 LA-DYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGADLAVMERDALRMRDG 249
L D + I+ V+ G+ P K +A + V+NK DL + + DL E D +
Sbjct: 129 LGEDMKMVILSVTEGNDKPLKYPVIFREAAVSVLNKIDLLNYVDFDLKQYEDDLQAINPD 188
Query: 250 GPFIFAQVKHGLGVEEIVNHILQAWEASTG 279
+ + G+E ++ I + + G
Sbjct: 189 QQRFYVSARTEEGLEPLIMFIAEKVRSKRG 218
>TIGR_CMR|DET_1431 [details] [associations]
symbol:DET_1431 "hydrogenase accessory protein HypB"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000166
"nucleotide binding" evidence=ISS] [GO:0006457 "protein folding"
evidence=ISS] [GO:0016530 "metallochaperone activity" evidence=ISS]
InterPro:IPR004392 InterPro:IPR012202 PIRSF:PIRSF005624
Pfam:PF02492 GO:GO:0006461 GO:GO:0003924 GO:GO:0006184
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0016151
InterPro:IPR003495 eggNOG:COG0378 HOGENOM:HOG000236980 KO:K04652
TIGRFAMs:TIGR00073 RefSeq:YP_182139.1 ProteinModelPortal:Q3Z6L0
STRING:Q3Z6L0 GeneID:3229240 KEGG:det:DET1431 PATRIC:21609889
OMA:QACHLDA ProtClustDB:CLSK836880
BioCyc:DETH243164:GJNF-1432-MONOMER Uniprot:Q3Z6L0
Length = 217
Score = 111 (44.1 bits), Expect = 0.00028, P = 0.00028
Identities = 44/176 (25%), Positives = 75/176 (42%)
Query: 91 GTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAA 150
G GKT+L+L + L D + + DI + D E + G+ + I+ GGC H
Sbjct: 39 GAGKTSLLLKTIELLGDDARVGVIEGDIASSVDAEKIAATGS---QAIQINTDGGC-HL- 93
Query: 151 IREDISINLGPLEELSNLFKADLLLCESGGDNLA-ANFSRELADYIIYIIDVSGGDKIPR 209
D ++ + L L K D++ E+ G+ + A F A ++ + V GD P
Sbjct: 94 ---DANMVASAADGLE-LDKLDIIFIENVGNLVCPAGFQLGEAKRVV-LASVPEGDDKPT 148
Query: 210 KGGPGITQADLLVINKTDLASAIGADLAVMERDALRMRDGGPFIFAQVKHGLGVEE 265
K D++VI K D ++ + L + I V++G G++E
Sbjct: 149 KYPFMFRDTDVIVITKMDYLPLSDFNMESFRKTVLGLNPDVKIIELSVRNGQGLDE 204
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.138 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 283 261 0.00090 114 3 11 22 0.49 33
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 611 (65 KB)
Total size of DFA: 187 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.20u 0.13s 22.33t Elapsed: 00:00:01
Total cpu time: 22.20u 0.13s 22.33t Elapsed: 00:00:01
Start: Thu May 9 22:23:21 2013 End: Thu May 9 22:23:22 2013