Query 023358
Match_columns 283
No_of_seqs 237 out of 1573
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 03:24:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023358.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023358hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02310 triacylglycerol lipas 100.0 2E-41 4.4E-46 313.6 24.9 221 34-259 30-312 (405)
2 PLN02802 triacylglycerol lipas 100.0 2.2E-41 4.7E-46 318.5 23.6 236 35-282 153-440 (509)
3 cd00519 Lipase_3 Lipase (class 100.0 1.7E-40 3.7E-45 290.9 25.4 210 37-257 2-218 (229)
4 PLN02454 triacylglycerol lipas 100.0 1.7E-40 3.7E-45 307.8 24.2 220 34-260 24-321 (414)
5 PLN03037 lipase class 3 family 100.0 4.4E-40 9.6E-45 310.1 25.5 224 34-259 131-423 (525)
6 PLN02324 triacylglycerol lipas 100.0 5.2E-40 1.1E-44 304.3 24.7 218 34-260 24-313 (415)
7 PLN02761 lipase class 3 family 100.0 1.5E-39 3.2E-44 306.7 23.0 224 35-260 107-409 (527)
8 PLN02934 triacylglycerol lipas 100.0 2.1E-39 4.5E-44 305.0 21.0 184 82-278 204-432 (515)
9 PLN02753 triacylglycerol lipas 100.0 6.3E-39 1.4E-43 302.7 23.9 224 35-260 123-425 (531)
10 PLN02408 phospholipase A1 100.0 6.2E-39 1.3E-43 294.3 23.0 224 34-259 15-319 (365)
11 PLN02571 triacylglycerol lipas 100.0 9.3E-39 2E-43 296.6 24.1 219 33-260 36-323 (413)
12 PLN02719 triacylglycerol lipas 100.0 1.3E-38 2.8E-43 299.8 23.7 224 35-260 108-411 (518)
13 KOG4569 Predicted lipase [Lipi 100.0 1.4E-38 2.9E-43 293.5 20.0 243 32-283 36-289 (336)
14 PLN00413 triacylglycerol lipas 100.0 1.1E-36 2.3E-41 285.0 19.7 169 83-258 184-381 (479)
15 PLN02162 triacylglycerol lipas 100.0 6.4E-36 1.4E-40 279.1 18.9 169 84-258 183-376 (475)
16 PF01764 Lipase_3: Lipase (cla 100.0 4.1E-32 8.8E-37 219.6 14.7 136 100-238 1-139 (140)
17 PLN02847 triacylglycerol lipas 100.0 1.1E-27 2.5E-32 228.4 16.9 146 86-238 167-320 (633)
18 cd00741 Lipase Lipase. Lipase 99.9 1.4E-24 3E-29 178.7 14.7 117 137-260 1-119 (153)
19 PF11187 DUF2974: Protein of u 99.7 1.8E-16 3.9E-21 138.4 13.7 133 83-238 24-157 (224)
20 KOG4540 Putative lipase essent 99.4 1.8E-12 4E-17 114.2 10.7 183 35-234 130-343 (425)
21 COG5153 CVT17 Putative lipase 99.4 1.8E-12 4E-17 114.2 10.7 183 35-234 130-343 (425)
22 COG3675 Predicted lipase [Lipi 99.2 8.5E-13 1.8E-17 116.2 -0.6 148 87-238 83-265 (332)
23 COG3675 Predicted lipase [Lipi 98.8 2.3E-09 5.1E-14 94.7 2.2 138 88-251 178-318 (332)
24 KOG2088 Predicted lipase/calmo 97.8 5.1E-06 1.1E-10 81.9 1.0 138 89-233 171-322 (596)
25 PF01083 Cutinase: Cutinase; 97.4 0.00017 3.7E-09 60.9 3.6 87 149-236 64-152 (179)
26 PF07819 PGAP1: PGAP1-like pro 97.3 0.0006 1.3E-08 59.7 6.3 57 152-209 66-127 (225)
27 PF05057 DUF676: Putative seri 97.2 0.0024 5.2E-08 55.5 9.6 58 151-208 61-128 (217)
28 PF06259 Abhydrolase_8: Alpha/ 97.2 0.0016 3.5E-08 54.9 7.8 84 149-237 91-175 (177)
29 COG2267 PldB Lysophospholipase 97.0 0.0017 3.7E-08 59.3 6.9 68 135-209 78-145 (298)
30 PHA02857 monoglyceride lipase; 97.0 0.004 8.7E-08 55.2 8.9 37 150-186 81-117 (276)
31 PF05990 DUF900: Alpha/beta hy 96.9 0.013 2.8E-07 51.6 10.9 138 95-236 16-170 (233)
32 PRK10749 lysophospholipase L2; 96.7 0.014 3E-07 53.7 10.2 54 148-206 113-166 (330)
33 cd00707 Pancreat_lipase_like P 96.6 0.0043 9.3E-08 55.9 6.1 78 149-231 93-175 (275)
34 PLN02733 phosphatidylcholine-s 96.5 0.0054 1.2E-07 59.0 6.1 62 150-211 146-207 (440)
35 TIGR01607 PST-A Plasmodium sub 96.5 0.016 3.4E-07 53.6 8.9 26 162-187 137-163 (332)
36 PLN02652 hydrolase; alpha/beta 96.4 0.034 7.4E-07 52.8 10.7 55 149-206 191-245 (395)
37 PF05277 DUF726: Protein of un 96.3 0.025 5.4E-07 52.6 9.0 72 164-235 218-291 (345)
38 PF06028 DUF915: Alpha/beta hy 96.3 0.0096 2.1E-07 53.2 6.1 56 151-206 88-144 (255)
39 PF00975 Thioesterase: Thioest 96.3 0.014 3E-07 50.3 6.9 58 148-206 48-105 (229)
40 KOG2564 Predicted acetyltransf 96.2 0.0035 7.7E-08 56.1 3.1 37 148-185 129-165 (343)
41 COG4782 Uncharacterized protei 96.2 0.055 1.2E-06 50.2 10.5 142 95-239 114-270 (377)
42 PLN02511 hydrolase 96.1 0.024 5.2E-07 53.6 8.4 55 148-204 155-209 (388)
43 COG3208 GrsT Predicted thioest 96.1 0.021 4.5E-07 50.3 7.2 102 97-206 9-113 (244)
44 PRK11126 2-succinyl-6-hydroxy- 96.1 0.016 3.4E-07 50.1 6.5 33 155-187 55-87 (242)
45 TIGR01250 pro_imino_pep_2 prol 96.1 0.08 1.7E-06 45.9 10.9 31 156-186 86-116 (288)
46 PF00561 Abhydrolase_1: alpha/ 96.0 0.018 3.8E-07 48.7 6.1 50 150-204 28-78 (230)
47 TIGR01838 PHA_synth_I poly(R)- 96.0 0.035 7.6E-07 54.7 8.8 56 150-205 246-302 (532)
48 PRK10985 putative hydrolase; P 95.9 0.016 3.5E-07 53.1 6.1 53 150-205 115-168 (324)
49 PLN02385 hydrolase; alpha/beta 95.9 0.069 1.5E-06 49.4 10.2 38 149-186 143-182 (349)
50 KOG1455 Lysophospholipase [Lip 95.9 0.021 4.5E-07 51.8 6.2 39 148-186 109-149 (313)
51 PLN02298 hydrolase, alpha/beta 95.9 0.019 4.1E-07 52.5 6.2 38 149-186 115-154 (330)
52 PRK11071 esterase YqiA; Provis 95.6 0.019 4.1E-07 48.8 4.7 34 154-187 49-82 (190)
53 TIGR03230 lipo_lipase lipoprot 95.6 0.085 1.8E-06 50.8 9.5 38 150-187 101-140 (442)
54 TIGR02427 protocat_pcaD 3-oxoa 95.5 0.02 4.3E-07 48.5 4.7 32 155-186 68-99 (251)
55 PF02450 LCAT: Lecithin:choles 95.5 0.03 6.4E-07 53.1 6.3 66 149-215 103-170 (389)
56 PF12697 Abhydrolase_6: Alpha/ 95.5 0.03 6.6E-07 46.4 5.7 46 155-205 55-101 (228)
57 PLN02965 Probable pheophorbida 95.5 0.029 6.2E-07 49.3 5.8 31 156-186 61-92 (255)
58 TIGR03695 menH_SHCHC 2-succiny 95.4 0.025 5.5E-07 47.7 5.0 32 156-187 60-91 (251)
59 PRK13604 luxD acyl transferase 95.4 0.029 6.3E-07 51.4 5.3 50 150-207 93-142 (307)
60 PF00326 Peptidase_S9: Prolyl 95.3 0.068 1.5E-06 45.6 7.3 66 98-186 17-84 (213)
61 TIGR03101 hydr2_PEP hydrolase, 95.3 0.057 1.2E-06 48.5 7.0 57 150-213 84-142 (266)
62 PLN02824 hydrolase, alpha/beta 95.2 0.041 9E-07 49.2 6.0 26 162-187 98-123 (294)
63 TIGR01836 PHA_synth_III_C poly 95.2 0.037 7.9E-07 51.3 5.7 35 152-186 122-156 (350)
64 KOG2088 Predicted lipase/calmo 95.1 0.011 2.4E-07 58.6 2.0 125 93-238 313-445 (596)
65 PRK10673 acyl-CoA esterase; Pr 95.1 0.033 7.2E-07 48.3 4.9 25 163-187 78-102 (255)
66 PF06342 DUF1057: Alpha/beta h 95.0 0.16 3.6E-06 45.7 8.8 84 98-187 36-125 (297)
67 TIGR01840 esterase_phb esteras 95.0 0.054 1.2E-06 46.4 5.7 52 151-206 78-131 (212)
68 PLN02894 hydrolase, alpha/beta 94.9 0.11 2.3E-06 49.5 8.1 32 156-187 166-197 (402)
69 TIGR02240 PHA_depoly_arom poly 94.8 0.043 9.4E-07 48.7 4.8 24 164-187 89-112 (276)
70 KOG4409 Predicted hydrolase/ac 94.7 0.05 1.1E-06 50.3 4.9 42 149-190 143-184 (365)
71 TIGR03611 RutD pyrimidine util 94.7 0.048 1E-06 46.7 4.7 30 158-187 72-101 (257)
72 COG3319 Thioesterase domains o 94.7 0.083 1.8E-06 47.2 6.2 43 148-190 47-89 (257)
73 PRK03204 haloalkane dehalogena 94.6 0.066 1.4E-06 48.1 5.6 35 152-186 87-121 (286)
74 PF05728 UPF0227: Uncharacteri 94.6 0.095 2.1E-06 44.6 6.2 37 151-187 44-80 (187)
75 TIGR03343 biphenyl_bphD 2-hydr 94.6 0.072 1.6E-06 47.0 5.8 32 156-187 91-122 (282)
76 PF08237 PE-PPE: PE-PPE domain 94.5 0.19 4E-06 44.1 7.9 76 164-239 46-141 (225)
77 PF12695 Abhydrolase_5: Alpha/ 94.5 0.072 1.6E-06 41.9 4.9 59 164-233 59-118 (145)
78 PLN02211 methyl indole-3-aceta 94.4 0.093 2E-06 47.0 5.9 22 165-186 86-107 (273)
79 PRK00870 haloalkane dehalogena 94.4 0.064 1.4E-06 48.3 4.9 31 156-186 105-135 (302)
80 TIGR03056 bchO_mg_che_rel puta 94.2 0.056 1.2E-06 47.3 4.1 29 158-186 87-115 (278)
81 PRK14875 acetoin dehydrogenase 94.1 0.15 3.1E-06 47.1 6.8 36 151-186 182-217 (371)
82 TIGR03100 hydr1_PEP hydrolase, 94.0 0.12 2.7E-06 46.2 5.9 37 149-185 82-119 (274)
83 KOG3724 Negative regulator of 94.0 0.073 1.6E-06 53.8 4.7 39 166-206 182-221 (973)
84 PF00151 Lipase: Lipase; Inte 93.9 0.098 2.1E-06 48.5 5.2 82 149-230 131-214 (331)
85 PF07859 Abhydrolase_3: alpha/ 93.8 0.12 2.6E-06 43.8 5.2 41 163-204 68-108 (211)
86 PRK10566 esterase; Provisional 93.7 0.12 2.6E-06 44.9 5.1 35 151-185 90-126 (249)
87 PRK03592 haloalkane dehalogena 93.7 0.15 3.3E-06 45.6 5.9 23 164-186 91-113 (295)
88 PLN02442 S-formylglutathione h 93.5 0.11 2.3E-06 46.9 4.7 38 149-186 126-163 (283)
89 TIGR01249 pro_imino_pep_1 prol 93.5 0.11 2.3E-06 47.1 4.7 36 152-187 81-116 (306)
90 COG0429 Predicted hydrolase of 93.4 0.43 9.3E-06 44.0 8.2 82 95-185 72-168 (345)
91 TIGR01392 homoserO_Ac_trn homo 93.3 0.12 2.5E-06 47.9 4.7 35 153-187 113-148 (351)
92 PF05677 DUF818: Chlamydia CHL 93.1 0.17 3.6E-06 46.8 5.2 34 152-185 198-234 (365)
93 PRK11460 putative hydrolase; P 92.8 0.16 3.5E-06 44.4 4.6 35 151-185 86-122 (232)
94 TIGR02821 fghA_ester_D S-formy 92.8 0.17 3.7E-06 45.3 4.7 23 165-187 137-159 (275)
95 TIGR01738 bioH putative pimelo 92.7 0.14 3.1E-06 43.1 4.0 22 165-186 64-85 (245)
96 PF10503 Esterase_phd: Esteras 92.7 0.13 2.8E-06 44.9 3.8 36 152-187 81-118 (220)
97 KOG1454 Predicted hydrolase/ac 92.6 0.21 4.6E-06 46.2 5.2 35 153-187 115-149 (326)
98 PRK10349 carboxylesterase BioH 92.3 0.29 6.2E-06 42.7 5.5 22 165-186 73-94 (256)
99 PLN03087 BODYGUARD 1 domain co 92.3 0.32 7E-06 47.4 6.3 29 158-186 266-294 (481)
100 PLN02679 hydrolase, alpha/beta 92.2 0.19 4.2E-06 46.8 4.5 22 164-185 153-174 (360)
101 PLN02517 phosphatidylcholine-s 92.0 0.23 4.9E-06 49.3 4.8 60 151-210 198-268 (642)
102 PRK08775 homoserine O-acetyltr 92.0 0.21 4.5E-06 46.1 4.4 21 167-187 139-159 (343)
103 PLN02578 hydrolase 91.9 0.23 5E-06 46.1 4.7 36 149-188 139-174 (354)
104 PF01674 Lipase_2: Lipase (cla 91.8 0.2 4.3E-06 43.7 3.8 36 150-186 60-95 (219)
105 COG3545 Predicted esterase of 91.8 2.6 5.6E-05 35.5 10.2 55 150-209 44-98 (181)
106 COG4814 Uncharacterized protei 91.8 0.29 6.4E-06 43.4 4.8 39 152-190 122-160 (288)
107 PRK07581 hypothetical protein; 91.8 0.28 6.1E-06 45.0 5.0 25 163-187 120-145 (339)
108 PLN00021 chlorophyllase 91.7 0.34 7.4E-06 44.5 5.4 23 166-188 126-148 (313)
109 TIGR01839 PHA_synth_II poly(R) 91.6 0.83 1.8E-05 45.2 8.2 54 151-204 273-327 (560)
110 COG3571 Predicted hydrolase of 91.5 0.43 9.4E-06 39.7 5.2 34 156-189 79-112 (213)
111 KOG4372 Predicted alpha/beta h 91.4 0.087 1.9E-06 49.5 1.2 93 94-190 77-174 (405)
112 PF11288 DUF3089: Protein of u 91.1 0.49 1.1E-05 40.9 5.4 56 149-204 77-135 (207)
113 PRK00175 metX homoserine O-ace 90.8 0.36 7.8E-06 45.3 4.8 34 154-187 134-168 (379)
114 PRK06489 hypothetical protein; 90.5 0.42 9.1E-06 44.4 4.9 22 166-187 153-175 (360)
115 PF10230 DUF2305: Uncharacteri 90.3 0.87 1.9E-05 40.8 6.6 57 148-206 61-122 (266)
116 PF05448 AXE1: Acetyl xylan es 90.2 0.56 1.2E-05 43.3 5.4 38 165-208 174-211 (320)
117 KOG2385 Uncharacterized conser 90.0 1.2 2.7E-05 43.2 7.6 74 163-236 444-519 (633)
118 PF03959 FSH1: Serine hydrolas 90.0 0.34 7.3E-06 41.8 3.6 81 153-234 90-176 (212)
119 PF09752 DUF2048: Uncharacteri 89.9 0.59 1.3E-05 43.4 5.2 46 162-212 171-216 (348)
120 PRK10162 acetyl esterase; Prov 89.8 0.41 8.9E-06 43.9 4.1 25 165-189 153-177 (318)
121 PTZ00472 serine carboxypeptida 89.5 0.48 1.1E-05 45.9 4.6 59 148-206 150-216 (462)
122 PRK06765 homoserine O-acetyltr 89.2 0.5 1.1E-05 44.8 4.4 36 152-187 146-182 (389)
123 COG0596 MhpC Predicted hydrola 89.0 0.54 1.2E-05 39.0 4.1 34 154-187 76-109 (282)
124 KOG2382 Predicted alpha/beta h 88.8 0.42 9.1E-06 43.8 3.4 40 131-177 95-134 (315)
125 KOG3101 Esterase D [General fu 88.7 0.049 1.1E-06 47.1 -2.6 78 165-260 140-224 (283)
126 COG1075 LipA Predicted acetylt 88.4 0.89 1.9E-05 42.2 5.4 60 149-210 110-169 (336)
127 PLN02872 triacylglycerol lipas 88.3 0.62 1.3E-05 44.3 4.3 34 150-184 145-178 (395)
128 smart00824 PKS_TE Thioesterase 88.1 2.1 4.5E-05 35.3 7.1 30 161-190 59-88 (212)
129 PF00756 Esterase: Putative es 88.1 0.39 8.5E-06 41.8 2.7 36 148-187 98-136 (251)
130 KOG1838 Alpha/beta hydrolase [ 87.8 2.1 4.4E-05 40.8 7.3 82 95-180 123-212 (409)
131 PRK05855 short chain dehydroge 87.7 0.69 1.5E-05 45.2 4.5 22 165-186 93-114 (582)
132 COG1647 Esterase/lipase [Gener 87.1 1.4 3.1E-05 38.4 5.4 53 147-206 67-119 (243)
133 PRK04940 hypothetical protein; 87.0 0.94 2E-05 38.3 4.2 22 166-187 60-81 (180)
134 PLN03084 alpha/beta hydrolase 86.9 1.4 3.1E-05 41.7 5.9 45 156-204 187-231 (383)
135 PRK05077 frsA fermentation/res 86.6 1.7 3.7E-05 41.5 6.3 21 165-185 264-284 (414)
136 PF02230 Abhydrolase_2: Phosph 85.4 1.1 2.4E-05 38.3 4.0 53 151-207 89-142 (216)
137 PLN02980 2-oxoglutarate decarb 85.2 1.1 2.3E-05 50.4 4.6 34 154-187 1433-1466(1655)
138 PF03583 LIP: Secretory lipase 84.9 2.4 5.2E-05 38.5 6.1 55 151-206 50-113 (290)
139 COG3150 Predicted esterase [Ge 84.8 1.6 3.6E-05 36.5 4.5 62 150-218 43-104 (191)
140 PRK07868 acyl-CoA synthetase; 84.5 1.9 4.2E-05 45.8 6.1 49 151-204 127-176 (994)
141 COG0657 Aes Esterase/lipase [L 84.4 2.3 4.9E-05 38.6 5.8 26 165-190 151-176 (312)
142 PF03403 PAF-AH_p_II: Platelet 84.0 0.83 1.8E-05 43.2 2.8 20 166-185 228-247 (379)
143 KOG2369 Lecithin:cholesterol a 83.3 1.1 2.4E-05 43.1 3.3 34 152-185 168-201 (473)
144 KOG4627 Kynurenine formamidase 82.1 2.8 6.2E-05 36.3 5.0 36 152-187 121-157 (270)
145 TIGR00976 /NonD putative hydro 81.0 3.1 6.7E-05 41.2 5.6 37 150-186 80-117 (550)
146 COG2945 Predicted hydrolase of 81.0 4 8.7E-05 34.9 5.4 38 150-187 86-124 (210)
147 TIGR03502 lipase_Pla1_cef extr 80.9 2 4.3E-05 44.4 4.3 24 163-186 552-575 (792)
148 PF06821 Ser_hydrolase: Serine 80.9 4 8.7E-05 34.0 5.5 38 165-206 54-92 (171)
149 PF07172 GRP: Glycine rich pro 79.8 1.6 3.4E-05 33.0 2.4 20 1-20 1-21 (95)
150 PF09125 COX2-transmemb: Cytoc 78.4 2.2 4.8E-05 26.0 2.2 17 3-19 13-29 (38)
151 COG4757 Predicted alpha/beta h 78.2 1 2.2E-05 39.7 1.0 36 150-185 89-124 (281)
152 PF01738 DLH: Dienelactone hyd 77.3 9.5 0.00021 32.4 6.9 37 150-186 80-118 (218)
153 COG3509 LpqC Poly(3-hydroxybut 76.4 3.9 8.4E-05 37.3 4.3 36 152-187 128-165 (312)
154 COG1506 DAP2 Dipeptidyl aminop 76.2 2.8 6.2E-05 42.2 3.8 38 149-187 454-494 (620)
155 COG3458 Acetyl esterase (deace 75.0 2.2 4.9E-05 38.4 2.3 37 149-185 157-195 (321)
156 PRK10252 entF enterobactin syn 74.5 7.5 0.00016 42.2 6.7 28 163-190 1130-1157(1296)
157 KOG3975 Uncharacterized conser 74.4 4.5 9.7E-05 36.1 4.0 37 147-183 90-127 (301)
158 PF11144 DUF2920: Protein of u 74.3 4.4 9.5E-05 38.5 4.2 35 151-185 165-203 (403)
159 KOG1552 Predicted alpha/beta h 73.4 4.2 9.1E-05 36.2 3.6 38 149-186 112-150 (258)
160 PRK10439 enterobactin/ferric e 72.3 4.3 9.4E-05 38.8 3.8 37 148-187 269-309 (411)
161 PF08840 BAAT_C: BAAT / Acyl-C 71.4 11 0.00025 32.3 6.0 22 166-187 22-43 (213)
162 PF06057 VirJ: Bacterial virul 71.3 14 0.0003 31.6 6.2 43 148-190 50-92 (192)
163 PF03283 PAE: Pectinacetyleste 69.4 10 0.00022 35.6 5.5 106 154-260 142-257 (361)
164 KOG4391 Predicted alpha/beta h 69.3 10 0.00023 33.2 5.0 23 165-187 148-170 (300)
165 COG0400 Predicted esterase [Ge 67.5 10 0.00022 32.7 4.7 38 150-187 81-120 (207)
166 PF12740 Chlorophyllase2: Chlo 67.0 6.3 0.00014 35.3 3.4 23 166-188 91-113 (259)
167 PF12048 DUF3530: Protein of u 66.9 27 0.00058 32.0 7.6 67 159-229 186-256 (310)
168 KOG3847 Phospholipase A2 (plat 66.1 2.3 4.9E-05 39.1 0.4 20 166-185 241-260 (399)
169 COG3243 PhaC Poly(3-hydroxyalk 66.0 9.3 0.0002 36.5 4.5 42 149-190 164-205 (445)
170 PF00450 Peptidase_S10: Serine 65.8 19 0.00042 33.6 6.7 61 148-208 115-183 (415)
171 cd00312 Esterase_lipase Estera 63.4 11 0.00024 36.4 4.7 35 152-186 160-196 (493)
172 COG2819 Predicted hydrolase of 63.3 11 0.00024 33.8 4.2 60 140-206 113-172 (264)
173 PF00091 Tubulin: Tubulin/FtsZ 62.6 12 0.00025 32.3 4.2 57 134-192 94-154 (216)
174 COG5023 Tubulin [Cytoskeleton] 60.9 16 0.00034 34.4 4.9 71 136-208 102-177 (443)
175 KOG4178 Soluble epoxide hydrol 60.8 17 0.00037 33.6 5.0 101 94-206 41-149 (322)
176 PF05577 Peptidase_S28: Serine 59.6 17 0.00036 34.7 5.1 62 151-216 95-159 (434)
177 TIGR01849 PHB_depoly_PhaZ poly 59.3 23 0.0005 33.9 5.9 39 166-204 168-207 (406)
178 PLN02633 palmitoyl protein thi 58.8 26 0.00056 32.2 5.9 37 167-207 95-133 (314)
179 COG0412 Dienelactone hydrolase 58.8 13 0.00028 32.7 3.8 36 150-186 94-132 (236)
180 COG3673 Uncharacterized conser 57.4 53 0.0012 30.6 7.5 41 149-189 104-145 (423)
181 KOG2029 Uncharacterized conser 57.0 26 0.00055 35.1 5.8 24 165-188 525-548 (697)
182 KOG2112 Lysophospholipase [Lip 56.4 22 0.00048 30.6 4.7 26 164-189 91-116 (206)
183 PF12715 Abhydrolase_7: Abhydr 56.2 14 0.0003 35.0 3.8 68 165-238 225-307 (390)
184 PRK09810 entericidin A; Provis 55.9 12 0.00025 23.7 2.2 18 3-20 2-19 (41)
185 COG4099 Predicted peptidase [G 55.5 42 0.00092 30.9 6.5 36 151-186 251-289 (387)
186 PF10340 DUF2424: Protein of u 55.2 32 0.0007 32.5 6.0 39 151-189 180-218 (374)
187 PF07224 Chlorophyllase: Chlor 54.8 8.4 0.00018 34.7 1.9 24 165-188 119-142 (307)
188 PLN02606 palmitoyl-protein thi 53.8 35 0.00076 31.3 5.9 37 167-207 96-134 (306)
189 PF10081 Abhydrolase_9: Alpha/ 53.5 1.5E+02 0.0033 26.9 9.7 81 152-234 92-187 (289)
190 PF02089 Palm_thioest: Palmito 53.1 48 0.001 30.0 6.6 37 167-207 81-118 (279)
191 cd02189 delta_tubulin The tubu 52.4 28 0.0006 33.7 5.3 48 147-194 107-158 (446)
192 PF03032 Brevenin: Brevenin/es 49.7 9.9 0.00021 24.6 1.2 21 3-23 3-24 (46)
193 PF13956 Ibs_toxin: Toxin Ibs, 49.5 8.5 0.00018 19.7 0.7 14 4-17 2-15 (19)
194 PF00135 COesterase: Carboxyle 49.2 24 0.00052 34.1 4.4 35 152-186 192-228 (535)
195 KOG1516 Carboxylesterase and r 48.9 25 0.00054 34.5 4.5 32 154-185 181-214 (545)
196 PF10614 CsgF: Type VIII secre 48.1 15 0.00033 29.8 2.3 47 3-49 1-49 (142)
197 PRK10350 hypothetical protein; 47.5 15 0.00032 29.1 2.1 37 3-41 1-38 (145)
198 PF08139 LPAM_1: Prokaryotic m 46.4 20 0.00043 20.1 1.9 14 3-16 7-20 (25)
199 PF01713 Smr: Smr domain; Int 44.9 1E+02 0.0023 21.8 6.2 58 151-208 14-74 (83)
200 PF02402 Lysis_col: Lysis prot 44.8 6.3 0.00014 25.1 -0.3 25 3-27 1-25 (46)
201 PF10956 DUF2756: Protein of u 44.8 41 0.00089 25.5 4.0 39 3-43 1-40 (104)
202 PRK13883 conjugal transfer pro 44.8 32 0.0007 28.2 3.8 48 3-53 1-50 (151)
203 TIGR02802 Pal_lipo peptidoglyc 44.7 93 0.002 23.0 6.2 53 152-204 18-82 (104)
204 PLN03016 sinapoylglucose-malat 44.4 39 0.00085 32.5 4.9 57 150-206 146-210 (433)
205 COG2143 Thioredoxin-related pr 43.5 18 0.00039 29.9 2.1 21 3-23 2-22 (182)
206 PF12099 DUF3575: Protein of u 43.3 13 0.00028 31.6 1.3 17 3-19 1-17 (189)
207 COG4188 Predicted dienelactone 43.3 20 0.00044 33.6 2.7 18 165-182 158-175 (365)
208 COG5510 Predicted small secret 43.1 25 0.00053 22.4 2.2 17 3-19 2-20 (44)
209 PRK10802 peptidoglycan-associa 42.8 88 0.0019 26.1 6.2 58 151-208 86-157 (173)
210 PRK03482 phosphoglycerate muta 42.2 55 0.0012 27.8 5.1 38 148-187 125-162 (215)
211 PLN02213 sinapoylglucose-malat 41.7 63 0.0014 29.6 5.7 57 150-206 32-96 (319)
212 PLN02209 serine carboxypeptida 41.4 47 0.001 32.0 5.0 57 150-206 148-212 (437)
213 PRK11372 lysozyme inhibitor; P 39.1 22 0.00048 27.4 1.9 20 1-22 1-20 (109)
214 cd02186 alpha_tubulin The tubu 38.6 64 0.0014 31.1 5.4 55 136-192 103-161 (434)
215 TIGR03162 ribazole_cobC alpha- 38.5 76 0.0016 25.8 5.3 37 148-186 120-156 (177)
216 PF09994 DUF2235: Uncharacteri 38.4 61 0.0013 29.1 5.0 40 148-187 73-113 (277)
217 cd00286 Tubulin_FtsZ Tubulin/F 38.1 51 0.0011 30.2 4.5 45 148-192 71-119 (328)
218 COG2382 Fes Enterochelin ester 37.8 22 0.00048 32.4 2.0 40 148-190 158-201 (299)
219 cd02188 gamma_tubulin Gamma-tu 37.8 86 0.0019 30.2 6.1 47 147-193 111-161 (431)
220 KOG2624 Triglyceride lipase-ch 37.6 21 0.00045 34.1 1.9 54 151-206 146-199 (403)
221 PF08538 DUF1749: Protein of u 37.3 80 0.0017 29.0 5.5 55 150-204 88-146 (303)
222 PRK15004 alpha-ribazole phosph 36.4 82 0.0018 26.4 5.2 37 148-186 124-160 (199)
223 PF14253 AbiH: Bacteriophage a 36.3 18 0.0004 31.8 1.2 20 165-184 234-253 (270)
224 PF10855 DUF2648: Protein of u 36.2 14 0.00031 21.8 0.3 16 3-18 1-16 (33)
225 COG2885 OmpA Outer membrane pr 36.0 1.4E+02 0.0031 24.8 6.7 59 151-209 100-172 (190)
226 COG0627 Predicted esterase [Ge 35.6 17 0.00036 33.6 0.9 21 167-187 153-173 (316)
227 PF07082 DUF1350: Protein of u 35.4 83 0.0018 28.0 5.1 22 166-187 90-111 (250)
228 PRK09408 ompX outer membrane p 34.9 13 0.00028 31.1 0.0 19 3-21 1-19 (171)
229 PF06291 Lambda_Bor: Bor prote 34.1 33 0.00072 25.9 2.1 26 3-28 1-26 (97)
230 KOG2183 Prolylcarboxypeptidase 33.8 44 0.00095 32.1 3.3 51 135-192 137-189 (492)
231 PF13173 AAA_14: AAA domain 33.6 45 0.00098 25.8 3.0 30 151-180 75-104 (128)
232 KOG1515 Arylacetamide deacetyl 33.4 1.6E+02 0.0034 27.5 6.9 42 165-206 165-207 (336)
233 PTZ00010 tubulin beta chain; P 33.4 92 0.002 30.1 5.6 56 136-193 102-161 (445)
234 cd02190 epsilon_tubulin The tu 33.1 73 0.0016 30.1 4.8 46 147-192 80-129 (379)
235 PTZ00335 tubulin alpha chain; 33.1 73 0.0016 30.9 4.8 56 136-193 104-163 (448)
236 PTZ00387 epsilon tubulin; Prov 32.9 72 0.0016 31.1 4.8 56 136-193 103-162 (465)
237 KOG4667 Predicted esterase [Li 32.3 30 0.00065 30.4 1.8 39 150-189 90-128 (269)
238 PRK13463 phosphatase PhoE; Pro 32.0 1.1E+02 0.0023 25.9 5.2 37 148-186 126-162 (203)
239 PRK13254 cytochrome c-type bio 31.4 1.7E+02 0.0036 23.9 6.0 25 85-110 71-95 (148)
240 PLN00220 tubulin beta chain; P 31.2 65 0.0014 31.1 4.2 68 136-205 102-174 (447)
241 cd06059 Tubulin The tubulin su 30.9 77 0.0017 29.9 4.5 46 147-192 70-119 (382)
242 cd02187 beta_tubulin The tubul 30.9 82 0.0018 30.3 4.8 56 137-194 102-161 (425)
243 PLN00221 tubulin alpha chain; 30.6 1.1E+02 0.0023 29.8 5.5 55 137-193 105-163 (450)
244 PF12242 Eno-Rase_NADH_b: NAD( 30.3 1.6E+02 0.0034 21.4 4.9 39 149-187 20-61 (78)
245 PRK15240 resistance to complem 29.6 27 0.00058 29.5 1.1 17 3-19 1-17 (185)
246 PLN00222 tubulin gamma chain; 29.3 1.4E+02 0.003 29.0 6.1 47 147-193 113-163 (454)
247 PF00300 His_Phos_1: Histidine 28.5 1.4E+02 0.0031 23.1 5.2 31 148-180 125-156 (158)
248 PRK15007 putative ABC transpor 26.9 46 0.001 28.4 2.2 44 3-46 1-57 (243)
249 PF06500 DUF1100: Alpha/beta h 26.7 1.7E+02 0.0038 28.0 6.1 106 84-204 175-295 (411)
250 TIGR03519 Bac_Flav_fam_1 Bacte 26.6 33 0.00072 31.0 1.2 16 3-18 1-16 (292)
251 cd01714 ETF_beta The electron 26.5 90 0.002 26.6 3.9 38 151-189 95-136 (202)
252 TIGR03656 IsdC heme uptake pro 26.5 47 0.001 28.9 2.0 17 3-19 1-17 (217)
253 smart00827 PKS_AT Acyl transfe 26.4 74 0.0016 28.3 3.5 19 166-184 82-100 (298)
254 PRK10144 formate-dependent nit 25.9 86 0.0019 24.9 3.3 8 62-69 42-49 (126)
255 COG2021 MET2 Homoserine acetyl 25.9 1.3E+02 0.0028 28.4 4.9 40 147-187 128-168 (368)
256 TIGR01165 cbiN cobalt transpor 25.2 66 0.0014 24.0 2.3 17 1-17 1-17 (91)
257 COG2272 PnbA Carboxylesterase 25.0 85 0.0018 30.7 3.7 32 154-185 166-200 (491)
258 COG0331 FabD (acyl-carrier-pro 25.0 81 0.0018 29.0 3.4 17 164-180 83-99 (310)
259 PRK10449 heat-inducible protei 24.9 56 0.0012 26.2 2.2 19 3-22 1-19 (140)
260 PRK11443 lipoprotein; Provisio 24.5 52 0.0011 26.0 1.8 11 3-13 1-11 (124)
261 COG5294 Uncharacterized protei 24.4 57 0.0012 25.2 1.9 16 3-18 1-16 (113)
262 PF02553 CbiN: Cobalt transpor 24.2 54 0.0012 23.5 1.7 16 3-18 1-16 (74)
263 PRK03554 tatA twin arginine tr 24.2 64 0.0014 24.0 2.1 17 2-18 5-21 (89)
264 PRK14119 gpmA phosphoglyceromu 24.1 1.7E+02 0.0036 25.3 5.1 37 148-186 155-193 (228)
265 TIGR03131 malonate_mdcH malona 23.7 88 0.0019 27.9 3.4 21 164-184 74-94 (295)
266 PF00698 Acyl_transf_1: Acyl t 23.2 70 0.0015 29.0 2.7 23 161-183 79-101 (318)
267 TIGR03848 MSMEG_4193 probable 23.1 1.8E+02 0.0039 24.4 5.1 37 149-187 123-164 (204)
268 PF15330 SIT: SHP2-interacting 23.0 48 0.001 25.5 1.3 13 6-18 1-13 (107)
269 PRK15396 murein lipoprotein; P 22.3 85 0.0018 22.7 2.4 19 1-19 1-19 (78)
270 cd00553 NAD_synthase NAD+ synt 22.2 3.4E+02 0.0073 23.7 6.8 76 150-227 8-85 (248)
271 PF14060 DUF4252: Domain of un 22.1 49 0.0011 26.6 1.3 19 4-22 1-19 (155)
272 PRK08384 thiamine biosynthesis 21.9 1.3E+02 0.0029 28.5 4.3 30 152-182 272-301 (381)
273 PRK13980 NAD synthetase; Provi 21.9 4E+02 0.0087 23.5 7.3 77 149-227 14-92 (265)
274 PF15240 Pro-rich: Proline-ric 21.9 61 0.0013 27.3 1.8 15 6-20 2-16 (179)
275 TIGR02052 MerP mercuric transp 21.7 64 0.0014 22.2 1.7 16 3-18 1-16 (92)
276 cd07185 OmpA_C-like Peptidogly 21.6 1.2E+02 0.0025 22.1 3.3 23 155-177 23-45 (106)
277 PF03823 Neurokinin_B: Neuroki 21.6 89 0.0019 21.1 2.2 16 3-18 1-16 (59)
278 KOG2551 Phospholipase/carboxyh 21.5 1.2E+02 0.0026 26.6 3.6 83 149-233 88-177 (230)
279 PF11777 DUF3316: Protein of u 21.5 74 0.0016 24.5 2.1 14 3-16 1-14 (114)
280 COG3007 Uncharacterized paraqu 21.4 1.9E+02 0.0041 26.7 4.9 56 148-206 20-79 (398)
281 PRK04598 tatA twin arginine tr 21.3 79 0.0017 23.1 2.1 17 2-18 5-21 (81)
282 PRK13838 conjugal transfer pil 21.2 75 0.0016 26.6 2.3 23 1-23 1-23 (176)
283 PRK10523 lipoprotein involved 20.6 76 0.0016 28.0 2.2 18 3-20 2-19 (234)
284 PRK13792 lysozyme inhibitor; P 20.5 68 0.0015 25.5 1.7 21 3-23 1-22 (127)
285 PF11153 DUF2931: Protein of u 20.5 67 0.0015 27.6 1.9 19 3-23 1-19 (216)
286 COG3771 Predicted membrane pro 20.4 1E+02 0.0022 22.8 2.5 17 3-19 1-17 (97)
287 PF13627 LPAM_2: Prokaryotic l 20.2 1.1E+02 0.0023 17.0 2.0 12 12-23 7-18 (24)
288 PF00879 Defensin_propep: Defe 20.2 1.1E+02 0.0024 20.3 2.4 17 3-19 1-17 (52)
289 COG0777 AccD Acetyl-CoA carbox 20.1 2.1E+02 0.0046 25.9 4.9 55 152-209 184-239 (294)
290 cd00394 Clp_protease_like Case 20.0 2.7E+02 0.006 22.1 5.4 36 150-185 14-49 (161)
No 1
>PLN02310 triacylglycerol lipase
Probab=100.00 E-value=2e-41 Score=313.62 Aligned_cols=221 Identities=28% Similarity=0.475 Sum_probs=179.2
Q ss_pred cCCHHHHHH---HHHHHHHhcCCCCcccccccCCCCC----------CC-CCCcEEEEEEeec-----------------
Q 023358 34 VYNHTLATI---LVEYASAVYMSDLTELFTWTCSRCD----------GL-TKGFEIIELVVDV----------------- 82 (283)
Q Consensus 34 ~y~~~~a~~---l~~~a~aaY~~~~~~~~~~~c~~~~----------~~-~~~~~~~~~~~d~----------------- 82 (283)
.-|+.+-+. +-+||.|+|..-..+...+.|+.|. .+ ..+|++.+.++.+
T Consensus 30 Pld~~LR~eiirYGe~~qA~Ydaf~~d~~s~~~g~c~y~~~~~~~~~~~~~~~Y~vt~~lYAts~v~~p~~~~~~~~~w~ 109 (405)
T PLN02310 30 PLHPWLRREILKYGEFAQATYDAFDFDPLSEYCGSCRYNRHKLFETLGLTKHGYKVKKYIYALSHVDVPHWLKRSQATWS 109 (405)
T ss_pred cCCHHHHHHHHHHHHHHHHHhhcccCCcCCccccccccchhhhhhhhCCCCCCceEEEEEEEeccCCCcccccccccccc
Confidence 345555554 5699999998766678888899886 12 2378988877643
Q ss_pred -ccceEEEEEEECCC-------CeEEEEEcCCCcCChHHHHhhccccccccCCCCCCCceEehhhHHHHhcc--------
Q 023358 83 -QHCLQGFLGVAKDL-------NAIVIAFRGTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNT-------- 146 (283)
Q Consensus 83 -~~~~~~~v~~~~~~-------~~ivVafRGT~~~s~~d~~~Dl~~~~~~~~~~~~~~~~vH~Gf~~~~~~~-------- 146 (283)
++.+.|||+++++. +.||||||||. +..||++|+++.+.+. .+.+++||+||++.|...
T Consensus 110 ~~~~w~GYVAv~~d~~~~~lGrrdIVVAfRGT~--s~~dWi~Dl~~~l~~~---~~~~~kVH~GF~~~Y~s~~~~~~~~~ 184 (405)
T PLN02310 110 KDSNWMGYVAVSRDEESQRIGRRDIMVAWRGTV--APSEWFLDLETKLEHI---DNTNVKVQEGFLKIYKSKDESTRYNK 184 (405)
T ss_pred ccCceeEEEEEcCCcccccCCCceEEEEECCCC--CHHHHHHhcccceecC---CCCCCEeeHhHHHHHhCcCccccccc
Confidence 23478999999865 48999999998 7899999998876543 236789999999999742
Q ss_pred -chHHHHHHHHHHHHHHcC----CeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCCCCHHHHHHHhccCCC
Q 023358 147 -TIRPAIINAVERAKDFYG----DLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFASYYTQLVPN 221 (283)
Q Consensus 147 -~~~~~i~~~l~~~~~~~~----~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prvgn~~fa~~~~~~~~~ 221 (283)
..++++++.|+++.+.|+ +++|+|||||||||||+|+|+++....+...+.+||||+|||||.+|++++++...+
T Consensus 185 ~sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPRVGN~~Fa~~~~~~~~~ 264 (405)
T PLN02310 185 LSASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPRVGNIAFKEKLNELGVK 264 (405)
T ss_pred chHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCCcccHHHHHHHHhcCCC
Confidence 257889999998887764 579999999999999999999998765566789999999999999999999998788
Q ss_pred EEEEEECCCccCcCCCCCCC----------CCCCcceecCceEEEecC
Q 023358 222 TFRVTNYHDIVPHLPPYYSY----------FPQKTYHHFPREVWLYHI 259 (283)
Q Consensus 222 ~~riv~~~D~VP~lP~~~~~----------~~~~~y~H~g~ev~~~~~ 259 (283)
++||+|..|+||++||.... ...+.|.|+|.|+.|+..
T Consensus 265 ~~RVvn~~DiVP~lPp~~~~~~~~~~~~~~~~~~~Y~HvG~el~lD~~ 312 (405)
T PLN02310 265 TLRVVVKQDKVPKLPGLLNKMLNKFHGLTGKLNWVYRHVGTQLKLDAF 312 (405)
T ss_pred EEEEEECCCccCccCcchhhchhhhccccccCceeEeccceEEEECCC
Confidence 99999999999999985311 013679999999999854
No 2
>PLN02802 triacylglycerol lipase
Probab=100.00 E-value=2.2e-41 Score=318.49 Aligned_cols=236 Identities=26% Similarity=0.397 Sum_probs=178.3
Q ss_pred CCHHHHHHH---HHHHHHhcCCCCcccccccCCCCCC-----CC-CCcEEEEEEee--------------------cccc
Q 023358 35 YNHTLATIL---VEYASAVYMSDLTELFTWTCSRCDG-----LT-KGFEIIELVVD--------------------VQHC 85 (283)
Q Consensus 35 y~~~~a~~l---~~~a~aaY~~~~~~~~~~~c~~~~~-----~~-~~~~~~~~~~d--------------------~~~~ 85 (283)
-|+.+-+.+ -+|+.|+|..-..+.... |+.|.- .+ .+|++.+.++- .++.
T Consensus 153 ld~~LR~eiirYGe~~qA~YdaF~~d~~S~-~g~~~~~~~~~~~~~~Y~vT~~lYAts~v~lp~~~~~~~~~~~~~~~sn 231 (509)
T PLN02802 153 LDENLRRELVRYGEFVQAAYHAFHSNPAMS-AEAPGRPRHVALPDRSYRVTKSLFATSSVGLPKWADDVAPDGWMTQRSS 231 (509)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhccCCCCc-cccchhhhhccCCCCCceEEEEEEeccCCCcchhhhccccccccccccC
Confidence 455555544 488888886322222222 444431 22 26888776542 2456
Q ss_pred eEEEEEEECC--------CCeEEEEEcCCCcCChHHHHhhccccccccCCC-----CCCCceEehhhHHHHhcc-----c
Q 023358 86 LQGFLGVAKD--------LNAIVIAFRGTQEHSIQNWIEDLFWKQLDINYP-----GMSDAMVHHGFYSAYHNT-----T 147 (283)
Q Consensus 86 ~~~~v~~~~~--------~~~ivVafRGT~~~s~~d~~~Dl~~~~~~~~~~-----~~~~~~vH~Gf~~~~~~~-----~ 147 (283)
+.|||+++++ ++.|||+||||. +..||++|+++..++.... .+.+++||+||+..|... .
T Consensus 232 w~GYVAV~~de~~~~rlGRRdIVVAFRGT~--s~~dWi~DL~~~lvp~~~~~~~~~~~~~~kVH~GFl~~Yts~~~~~~S 309 (509)
T PLN02802 232 WVGYVAVCDSPREIRRMGRRDIVIALRGTA--TCLEWAENLRAGLVPMPGDDDDAGDQEQPKVECGFLSLYKTAGAHVPS 309 (509)
T ss_pred ceeEEEEcCCchhhhccCCceEEEEEcCCC--CHHHHHHHhccceeecCcccccccCCCcchHHHHHHHHHHhhccccch
Confidence 8899999886 368999999998 8999999999877654321 245799999999999742 3
Q ss_pred hHHHHHHHHHHHHHHcCC--eEEEEeccChhHHHHHHHhHHhhhhcCC-cceEEEEecCCCCCCHHHHHHHhccCCCEEE
Q 023358 148 IRPAIINAVERAKDFYGD--LNIMVTGHSMGGAMAAFCGLDLTVNLGI-QNVQVMTFGQPRIGNAAFASYYTQLVPNTFR 224 (283)
Q Consensus 148 ~~~~i~~~l~~~~~~~~~--~~i~vTGHSLGGalA~l~a~~l~~~~~~-~~v~~~tFg~Prvgn~~fa~~~~~~~~~~~r 224 (283)
+++++++.|++++++|++ ++|+|||||||||||+|+|.++...... ..+.+||||+|||||.+|++++++...+++|
T Consensus 310 ~reqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGsPRVGN~aFA~~~~~~~~~~~R 389 (509)
T PLN02802 310 LSESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGGPRVGNRAFADRLNARGVKVLR 389 (509)
T ss_pred HHHHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCCCCcccHHHHHHHHhcCCcEEE
Confidence 678899999999999875 6899999999999999999999876433 2689999999999999999999877778999
Q ss_pred EEECCCccCcCCCCCC--CCCCCcceecCceEEEecCCCCccccccceeccCCCCCCCCC
Q 023358 225 VTNYHDIVPHLPPYYS--YFPQKTYHHFPREVWLYHIGLGSLIYEVEKICDGSGEDPSCS 282 (283)
Q Consensus 225 iv~~~D~VP~lP~~~~--~~~~~~y~H~g~ev~~~~~~~~~~~~~~~~~C~~~~ed~~Cs 282 (283)
|+|..|+||++|+... .+..++|.|+|.|+||++.+ .+| . . .++|+.|+
T Consensus 390 VVN~~DiVP~lPp~~~~~~~~~~gY~HvG~El~Id~~~---SPy---l--k-~~~d~~c~ 440 (509)
T PLN02802 390 VVNAQDVVTRVPGIAPREELHKWAYAHVGAELRLDSKM---SPY---L--R-PDADVACC 440 (509)
T ss_pred EecCCCeecccCccccccccCCcCceecCEEEEECCCC---Ccc---c--c-CCCCcccc
Confidence 9999999999998631 11236999999999997754 244 2 2 24788875
No 3
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=100.00 E-value=1.7e-40 Score=290.93 Aligned_cols=210 Identities=37% Similarity=0.595 Sum_probs=173.7
Q ss_pred HHHHHHHHHHHHHhcCCCCcccccccCCCCCCCCCCcEEEEEEeec-------ccceEEEEEEECCCCeEEEEEcCCCcC
Q 023358 37 HTLATILVEYASAVYMSDLTELFTWTCSRCDGLTKGFEIIELVVDV-------QHCLQGFLGVAKDLNAIVIAFRGTQEH 109 (283)
Q Consensus 37 ~~~a~~l~~~a~aaY~~~~~~~~~~~c~~~~~~~~~~~~~~~~~d~-------~~~~~~~v~~~~~~~~ivVafRGT~~~ 109 (283)
...++.++.++.++||... ....| | .. .+...+...+.+. .+..++||++|++.+.++|+||||.
T Consensus 2 ~~~~~~~~~~~~~aY~~~~-~~~~~-~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ivva~RGT~-- 73 (229)
T cd00519 2 YEKLKYYAKLAAAAYCVDA-NILAK-A---VV-FADIALLNVFSPDKLLKTDKQYDTQGYVAVDHDRKTIVIAFRGTV-- 73 (229)
T ss_pred hHHHHHHHHHHHheeccCC-CCCcc-c---cc-CCCeEEEEEEeCCCccccccCCCceEEEEEECCCCeEEEEEeCCC--
Confidence 3567789999999999753 34445 2 22 2344445545442 3678999999999999999999998
Q ss_pred ChHHHHhhccccccccCCCCCCCceEehhhHHHHhccchHHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhh
Q 023358 110 SIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTV 189 (283)
Q Consensus 110 s~~d~~~Dl~~~~~~~~~~~~~~~~vH~Gf~~~~~~~~~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~ 189 (283)
++.||++|+....++.....+.+++||+||++++. .+..++.+.++++++++|+++|++||||||||+|+++++++..
T Consensus 74 ~~~d~~~d~~~~~~~~~~~~~~~~~vh~Gf~~~~~--~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~ 151 (229)
T cd00519 74 SLADWLTDLDFSPVPLDPPLCSGGKVHSGFYSAYK--SLYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRL 151 (229)
T ss_pred chHHHHHhcccccccCCCCCCCCcEEcHHHHHHHH--HHHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHh
Confidence 78999999987776554434678999999999998 6778888899999999999999999999999999999999987
Q ss_pred hcCCcceEEEEecCCCCCCHHHHHHHhccCCCEEEEEECCCccCcCCCCCCCCCCCcceecCceEEEe
Q 023358 190 NLGIQNVQVMTFGQPRIGNAAFASYYTQLVPNTFRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLY 257 (283)
Q Consensus 190 ~~~~~~v~~~tFg~Prvgn~~fa~~~~~~~~~~~riv~~~D~VP~lP~~~~~~~~~~y~H~g~ev~~~ 257 (283)
..+..++.++|||+||+||.+|+++.+....+++||+|.+|+||+||+.... ..++|.|+|.|||++
T Consensus 152 ~~~~~~i~~~tFg~P~vg~~~~a~~~~~~~~~~~rvv~~~D~Vp~lp~~~~~-~~~~~~h~~~e~~~d 218 (229)
T cd00519 152 RGPGSDVTVYTFGQPRVGNAAFAEYLESTKGRVYRVVHGNDIVPRLPPGSLT-PPEGYTHVGTEVWID 218 (229)
T ss_pred hCCCCceEEEEeCCCCCCCHHHHHHhhccCCCEEEEEECCCcccccCccccc-CCcccEecCceEEEe
Confidence 6556789999999999999999999888778899999999999999986210 126899999999994
No 4
>PLN02454 triacylglycerol lipase
Probab=100.00 E-value=1.7e-40 Score=307.83 Aligned_cols=220 Identities=22% Similarity=0.366 Sum_probs=173.7
Q ss_pred cCCHHHHHHH---HHHHHHhcCCCCcccccccCCCCCC----------C--CCCcEEEEEEee-----------------
Q 023358 34 VYNHTLATIL---VEYASAVYMSDLTELFTWTCSRCDG----------L--TKGFEIIELVVD----------------- 81 (283)
Q Consensus 34 ~y~~~~a~~l---~~~a~aaY~~~~~~~~~~~c~~~~~----------~--~~~~~~~~~~~d----------------- 81 (283)
+-|+.|-+.+ -+|+.|+|..-........|+.|.- + ..+|++.+.++-
T Consensus 24 Pld~~LR~~iiryGe~~qa~ydaf~~d~~s~~~g~~ry~~~~~~~~~~~~~~~~Y~vt~~lyAts~v~~p~~~~~~~~~~ 103 (414)
T PLN02454 24 PLDLSLRELILRCGDFCQATYDSFNNDQNSKYCGASRYGKSSFFDKVMLEAASDYEVAAFLYATARVSLPEAFLLHSMSR 103 (414)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhhccCCCCccccccccchhhhHhhcCCCCCCCceEEEEEEEccCCCCchhhhcccccc
Confidence 4456655554 4888899864444455556766631 1 236777765542
Q ss_pred ----cccceEEEEEEECCC-------CeEEEEEcCCCcCChHHHHhhccccccccC--------------------CCCC
Q 023358 82 ----VQHCLQGFLGVAKDL-------NAIVIAFRGTQEHSIQNWIEDLFWKQLDIN--------------------YPGM 130 (283)
Q Consensus 82 ----~~~~~~~~v~~~~~~-------~~ivVafRGT~~~s~~d~~~Dl~~~~~~~~--------------------~~~~ 130 (283)
.++.+.|||+++++. +.|||+||||. +..||++|+.+.+++.. -+.+
T Consensus 104 ~~w~~~snw~GYVAV~~d~~~~~lGrrdIvVafRGT~--t~~eWi~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (414)
T PLN02454 104 ESWDRESNWIGYIAVTSDERTKALGRREIYVAWRGTT--RNYEWVDVLGAKLTSADPLLPGPEQDGVVSGSSSDSDDDDE 181 (414)
T ss_pred ccccccCceeEEEEEcCCccccccCcceEEEEECCCC--cHHHHHHhccccccccccccCccccccccccccccccCCCC
Confidence 146688999999864 48999999998 78999999998776542 1246
Q ss_pred CCceEehhhHHHHhc---------cchHHHHHHHHHHHHHHcCCeE--EEEeccChhHHHHHHHhHHhhhhcC---Ccce
Q 023358 131 SDAMVHHGFYSAYHN---------TTIRPAIINAVERAKDFYGDLN--IMVTGHSMGGAMAAFCGLDLTVNLG---IQNV 196 (283)
Q Consensus 131 ~~~~vH~Gf~~~~~~---------~~~~~~i~~~l~~~~~~~~~~~--i~vTGHSLGGalA~l~a~~l~~~~~---~~~v 196 (283)
.+++||+||++.|.. ..+++++.+.|++++++||+.+ |++||||||||||+|+|.++..... ..+|
T Consensus 182 ~~~kVH~GF~~~Yts~~~~~~f~~~S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V 261 (414)
T PLN02454 182 KGPKVMLGWLTIYTSDDPRSPFTKLSARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPV 261 (414)
T ss_pred CCcEEeHhHHHHhhccCccccchhHHHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCce
Confidence 789999999999962 2478899999999999999765 9999999999999999999987521 2358
Q ss_pred EEEEecCCCCCCHHHHHHHhccC-CCEEEEEECCCccCcCCCCCCCCCCCcceecCceEEEecCC
Q 023358 197 QVMTFGQPRIGNAAFASYYTQLV-PNTFRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLYHIG 260 (283)
Q Consensus 197 ~~~tFg~Prvgn~~fa~~~~~~~-~~~~riv~~~D~VP~lP~~~~~~~~~~y~H~g~ev~~~~~~ 260 (283)
.+||||+|||||.+|++++++.. -+++||+|..|+||++||. .++|+|+|+||||+...
T Consensus 262 ~~~TFGsPRVGN~~Fa~~~~~~~~~rvlrVvN~~DiVP~lPp~-----~~gY~HvG~El~id~~~ 321 (414)
T PLN02454 262 TAIVFGSPQVGNKEFNDRFKEHPNLKILHVRNTIDLIPHYPGG-----LLGYVNTGTELVIDTRK 321 (414)
T ss_pred EEEEeCCCcccCHHHHHHHHhCCCceEEEEecCCCeeeeCCCC-----cCCccccCeEEEECCCC
Confidence 89999999999999999999864 3689999999999999997 36999999999997643
No 5
>PLN03037 lipase class 3 family protein; Provisional
Probab=100.00 E-value=4.4e-40 Score=310.10 Aligned_cols=224 Identities=28% Similarity=0.478 Sum_probs=178.1
Q ss_pred cCCHHHHHH---HHHHHHHhcCCCCcccccccCCCCC----------CC-CCCcEEEEEEeec-----------------
Q 023358 34 VYNHTLATI---LVEYASAVYMSDLTELFTWTCSRCD----------GL-TKGFEIIELVVDV----------------- 82 (283)
Q Consensus 34 ~y~~~~a~~---l~~~a~aaY~~~~~~~~~~~c~~~~----------~~-~~~~~~~~~~~d~----------------- 82 (283)
+-|+.|-+. +-+||.|+|..-..+...+.|+.|. ++ ..+|++...++.+
T Consensus 131 PLd~~LR~eiirYGe~~qA~YdaF~~d~~S~~~g~cry~~~~~~~~~~l~~~~Y~Vt~~iYAts~v~vP~~f~~s~~~~~ 210 (525)
T PLN03037 131 PLHPWLRREVVKYGEFVEATYDAFDFDPLSEFCGSCRYNRHKLFEELGLTKHGYKVTKYIYAMSHVDVPQWFLRSATGET 210 (525)
T ss_pred ccCHHHHHHHHHHHHHHHHHhhccccCcCCCcccccccchhhHHHhhCCCCCCceEEEEEeeccccCchHhhcccccccc
Confidence 345555554 4589999998766678888899885 12 2368887766532
Q ss_pred ---ccceEEEEEEECC-------CCeEEEEEcCCCcCChHHHHhhccccccccCCC---CCCCceEehhhHHHHhcc---
Q 023358 83 ---QHCLQGFLGVAKD-------LNAIVIAFRGTQEHSIQNWIEDLFWKQLDINYP---GMSDAMVHHGFYSAYHNT--- 146 (283)
Q Consensus 83 ---~~~~~~~v~~~~~-------~~~ivVafRGT~~~s~~d~~~Dl~~~~~~~~~~---~~~~~~vH~Gf~~~~~~~--- 146 (283)
++.+.|||+++++ ++.||||||||. +..||++|+.+.+++.+.. +..+++||+||++.|...
T Consensus 211 ws~~snw~GYVAVstDe~~~rlGRRdIVVAfRGT~--s~~EWl~DL~~~lvp~~~~~~~~~~~~kVH~GFlslYtS~~~~ 288 (525)
T PLN03037 211 WSKDSNWMGFVAVSGDRESQRIGRRDIVVAWRGTV--APTEWFMDLRTSLEPFDCDGDHGKNVVKVQSGFLSIYKSKSEL 288 (525)
T ss_pred cCCCCceEEEEEEeCCccccccCCceEEEEECCCC--CHHHHHHhhhccccccccccCCCCCCceeeHhHHHHHhCcccc
Confidence 3457899999887 458999999998 7899999998766654332 245789999999999731
Q ss_pred ------chHHHHHHHHHHHHHHcC----CeEEEEeccChhHHHHHHHhHHhhhhcCCc-ceEEEEecCCCCCCHHHHHHH
Q 023358 147 ------TIRPAIINAVERAKDFYG----DLNIMVTGHSMGGAMAAFCGLDLTVNLGIQ-NVQVMTFGQPRIGNAAFASYY 215 (283)
Q Consensus 147 ------~~~~~i~~~l~~~~~~~~----~~~i~vTGHSLGGalA~l~a~~l~~~~~~~-~v~~~tFg~Prvgn~~fa~~~ 215 (283)
+.++++++.|+++.++|+ +++|+|||||||||||+|+|++++...+.. ++.+||||+|||||.+|++++
T Consensus 289 s~fnk~SareQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPRVGN~aFA~~~ 368 (525)
T PLN03037 289 TRYNKLSASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAPRVGNLAFKEKL 368 (525)
T ss_pred cccccchhHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCCccCHHHHHHH
Confidence 356788888988888775 578999999999999999999998765443 789999999999999999999
Q ss_pred hccCCCEEEEEECCCccCcCCCCCCC-----------CCCCcceecCceEEEecC
Q 023358 216 TQLVPNTFRVTNYHDIVPHLPPYYSY-----------FPQKTYHHFPREVWLYHI 259 (283)
Q Consensus 216 ~~~~~~~~riv~~~D~VP~lP~~~~~-----------~~~~~y~H~g~ev~~~~~ 259 (283)
++...+++||+|.+|+||++||.... ...++|.|+|.|+-++..
T Consensus 369 ~~l~~~~lRVVN~~DiVP~lPp~~~~~~~~~~~~~~~~~~w~Y~hVG~eL~lD~~ 423 (525)
T PLN03037 369 NELGVKVLRVVNKQDIVPKLPGIIFNKILNKLNPITSRLNWVYRHVGTQLKLDMF 423 (525)
T ss_pred HhcCCCEEEEEECCCccccCCchhhccchhhcccccccCCceeEecceeEEecCC
Confidence 99877899999999999999996310 012679999999999743
No 6
>PLN02324 triacylglycerol lipase
Probab=100.00 E-value=5.2e-40 Score=304.30 Aligned_cols=218 Identities=23% Similarity=0.403 Sum_probs=171.4
Q ss_pred cCCHHHHHHH---HHHHHHhcCCCCcccccccCCCCCC--------------CCCCcEEEEEEee---------------
Q 023358 34 VYNHTLATIL---VEYASAVYMSDLTELFTWTCSRCDG--------------LTKGFEIIELVVD--------------- 81 (283)
Q Consensus 34 ~y~~~~a~~l---~~~a~aaY~~~~~~~~~~~c~~~~~--------------~~~~~~~~~~~~d--------------- 81 (283)
+-|+.|-+.+ -+|+.|+|..-........|+.|.- .+.+|++.+.++-
T Consensus 24 Pld~~LR~~iirYGe~~qa~Ydaf~~d~~s~~~g~~ry~~~~~~~~~~~~~~~~~~Y~vT~~lYAts~~~~p~~f~~~~~ 103 (415)
T PLN02324 24 PLDPDLRRYIIHYGEMSQVGYDAFNWDRKSKYAGDCYYSKNELFARTGFLKANPFRYEVTKYIYATASIKLPICFIVKSL 103 (415)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHhccCccCccccccccchhhHHHhhcccccCCCCceEEEEEEeccCCCCcchhhcccc
Confidence 3455555554 4888888864334445555666521 1336887776542
Q ss_pred ------cccceEEEEEEECCC-------CeEEEEEcCCCcCChHHHHhhcccccccc--CCCCC---CCceEehhhHHHH
Q 023358 82 ------VQHCLQGFLGVAKDL-------NAIVIAFRGTQEHSIQNWIEDLFWKQLDI--NYPGM---SDAMVHHGFYSAY 143 (283)
Q Consensus 82 ------~~~~~~~~v~~~~~~-------~~ivVafRGT~~~s~~d~~~Dl~~~~~~~--~~~~~---~~~~vH~Gf~~~~ 143 (283)
.++.+.|||+++.+. +.|||+||||. +..||++|+++.+++. .+|.+ .+++||+||++.|
T Consensus 104 ~~~~w~~~s~w~GYVAv~~d~~~~~lGrrdIVVafRGT~--t~~eWi~Dl~~~~~~~~~~~p~~~~~~~~kVH~GFl~~Y 181 (415)
T PLN02324 104 SKDASRVQTNWMGYIAVATDQGKAMLGRRDIVVAWRGTL--QPYEWANDFDFPLESAISVFPVTDPKDNPRIGSGWLDIY 181 (415)
T ss_pred cccccccccceeEEEEEeCCccccccCCceEEEEEccCC--CHHHHHHHhccccccccccCCCCCCCCCceeehhHHHHh
Confidence 246688999998874 38999999998 7999999999877653 24543 3689999999999
Q ss_pred hc---------cchHHHHHHHHHHHHHHcCC--eEEEEeccChhHHHHHHHhHHhhhhc----------CCcceEEEEec
Q 023358 144 HN---------TTIRPAIINAVERAKDFYGD--LNIMVTGHSMGGAMAAFCGLDLTVNL----------GIQNVQVMTFG 202 (283)
Q Consensus 144 ~~---------~~~~~~i~~~l~~~~~~~~~--~~i~vTGHSLGGalA~l~a~~l~~~~----------~~~~v~~~tFg 202 (283)
.. .++++++++.|++++++||+ ++|+|||||||||||+|+|+++.... ....|.+||||
T Consensus 182 ts~~~~~~f~k~SareqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFG 261 (415)
T PLN02324 182 TASDSRSPYDTTSAQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFG 261 (415)
T ss_pred cCcCcccccchhHHHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEec
Confidence 73 14788999999999999985 68999999999999999999997631 13458899999
Q ss_pred CCCCCCHHHHHHHhccC-CCEEEEEECCCccCcCCCCCCCCCCCcceecCceEEEecCC
Q 023358 203 QPRIGNAAFASYYTQLV-PNTFRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLYHIG 260 (283)
Q Consensus 203 ~Prvgn~~fa~~~~~~~-~~~~riv~~~D~VP~lP~~~~~~~~~~y~H~g~ev~~~~~~ 260 (283)
+|||||.+|++++++.. .+++||+|.+|+||++|+. +|.|+|.|+||+...
T Consensus 262 sPRVGN~~Fa~~~~~~~~~~~~RVvn~~D~VP~lP~~-------~Y~hvG~el~Id~~~ 313 (415)
T PLN02324 262 SPRIGDHNFKNLVDSLQPLNILRIVNVPDVAPHYPLL-------LYTEIGEVLEINTLN 313 (415)
T ss_pred CCCcCCHHHHHHHHhcCCcceEEEEeCCCcCCcCCCc-------ccccCceEEEEcCCC
Confidence 99999999999999865 4689999999999999974 799999999998543
No 7
>PLN02761 lipase class 3 family protein
Probab=100.00 E-value=1.5e-39 Score=306.72 Aligned_cols=224 Identities=29% Similarity=0.446 Sum_probs=177.2
Q ss_pred CCHHHHHHH---HHHHHHhcCCCCcccccccCCCCCC----C--------CCCcEEEEEEeec-----------------
Q 023358 35 YNHTLATIL---VEYASAVYMSDLTELFTWTCSRCDG----L--------TKGFEIIELVVDV----------------- 82 (283)
Q Consensus 35 y~~~~a~~l---~~~a~aaY~~~~~~~~~~~c~~~~~----~--------~~~~~~~~~~~d~----------------- 82 (283)
-|+.+-+.+ -+|+.|+|..-..+.....|+.|.- + ..+|++.+.++-+
T Consensus 107 Ld~~LR~eiirYGe~~qA~YdaF~~d~~S~~~g~cry~~~~l~~~~~~~~~~~Y~VTkylYAts~v~lP~~~~~~~~~~~ 186 (527)
T PLN02761 107 MNNHLRREIIRYGEFAQACYDSFDFDPHSKYCGSCKYHPSDFFQNLDLHLHKGYTITRYLYATSNINLPNFFQKSKLSSI 186 (527)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhhccCCCCccccccccchhhHHHHhCCCCCCCceEEEEEEeccCCCCchhhcccccccc
Confidence 344544443 4888899964444455556766631 1 3468888766521
Q ss_pred ---ccceEEEEEEECCC--------CeEEEEEcCCCcCChHHHHhhccccccccCCCCCCCceEehhhHHHHhcc-----
Q 023358 83 ---QHCLQGFLGVAKDL--------NAIVIAFRGTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNT----- 146 (283)
Q Consensus 83 ---~~~~~~~v~~~~~~--------~~ivVafRGT~~~s~~d~~~Dl~~~~~~~~~~~~~~~~vH~Gf~~~~~~~----- 146 (283)
++.+.|||+++.+. +.|||+||||. +..||++|+.+.+++..++.+++++||+||++.|...
T Consensus 187 ws~~snw~GYVAV~~de~~~~rlGRRdIVVAfRGT~--t~~EWi~DL~~~lvpa~~~~~~~~kVH~GFls~Yts~~~~~~ 264 (527)
T PLN02761 187 WSQHANWMGYVAVATDEEEVKRLGRRDIVIAWRGTV--TYLEWIYDLKDILCSANFGDDPSIKIELGFHDLYTKKEDSCK 264 (527)
T ss_pred cccCCceeEEEEEcCCcchhcccCCceEEEEEcCCC--cHHHHHHhccccccccCCCCCCchhHHHHHHHHhhccCcccc
Confidence 46688999998875 36999999998 7899999999888777777778899999999999732
Q ss_pred ----chHHHHHHHHHHHHHHc------CCeEEEEeccChhHHHHHHHhHHhhhhc--------CCcceEEEEecCCCCCC
Q 023358 147 ----TIRPAIINAVERAKDFY------GDLNIMVTGHSMGGAMAAFCGLDLTVNL--------GIQNVQVMTFGQPRIGN 208 (283)
Q Consensus 147 ----~~~~~i~~~l~~~~~~~------~~~~i~vTGHSLGGalA~l~a~~l~~~~--------~~~~v~~~tFg~Prvgn 208 (283)
++++++++.|+++.++| ++++|+|||||||||||+|+|++++... ...+|.+||||+|||||
T Consensus 265 ~~k~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN 344 (527)
T PLN02761 265 FSSFSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGN 344 (527)
T ss_pred ccchhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCC
Confidence 57889999999999888 3578999999999999999999997531 12348999999999999
Q ss_pred HHHHHHHhccCCCEEEEEECCCccCcCCCCCCC-------------CCCCcceecCceEEEecCC
Q 023358 209 AAFASYYTQLVPNTFRVTNYHDIVPHLPPYYSY-------------FPQKTYHHFPREVWLYHIG 260 (283)
Q Consensus 209 ~~fa~~~~~~~~~~~riv~~~D~VP~lP~~~~~-------------~~~~~y~H~g~ev~~~~~~ 260 (283)
.+|++++++...+++||+|..|+||++|+.... ...++|.|+|.|+.++...
T Consensus 345 ~~FA~~~d~l~~~~lRVvN~~D~VP~lP~~~~~e~~~~~~~~~~~~~~~~~Y~hVG~EL~iD~~~ 409 (527)
T PLN02761 345 LRFKERCDELGVKVLRVVNVHDKVPSVPGIFTNEKFQFQKYVEEKTSFPWSYAHVGVELALDHKK 409 (527)
T ss_pred HHHHHHHHhcCCcEEEEEcCCCCcCCCCcccccccchhhhhhhccccCcceeeeeeeEEEEcCCC
Confidence 999999999877899999999999999985310 1136899999999998643
No 8
>PLN02934 triacylglycerol lipase
Probab=100.00 E-value=2.1e-39 Score=305.00 Aligned_cols=184 Identities=30% Similarity=0.433 Sum_probs=147.4
Q ss_pred cccceEEEEEEECCC--CeEEEEEcCCCcCChHHHHhhccccccccCCCCCCCceEehhhHHHHhc----------cc--
Q 023358 82 VQHCLQGFLGVAKDL--NAIVIAFRGTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHN----------TT-- 147 (283)
Q Consensus 82 ~~~~~~~~v~~~~~~--~~ivVafRGT~~~s~~d~~~Dl~~~~~~~~~~~~~~~~vH~Gf~~~~~~----------~~-- 147 (283)
...++++|+++|+.. +.|||+||||++.++.||++|+++...+ ++ ..|+||.||+++|.. ..
T Consensus 204 ~~~~TqaFi~~Dk~~d~~~IVVAFRGT~p~s~~dWiTDldfs~~~--~p--~~gkVH~GF~~A~~l~~~~~~~tf~~~l~ 279 (515)
T PLN02934 204 KQMSTQVFIFCDKPKDANLIVISFRGTEPFDADDWGTDFDYSWYE--IP--KVGKVHMGFLEAMGLGNRDDTTTFQTSLQ 279 (515)
T ss_pred ccCCceEEEEEccccCCceEEEEECCCCcCCHHHHhhccCccccC--CC--CCCeecHHHHHHHhhhccccccchhhhhh
Confidence 356789999999855 9999999999977899999999876654 33 348999999998841 01
Q ss_pred -----------------------hHHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcC----CcceEEEE
Q 023358 148 -----------------------IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLG----IQNVQVMT 200 (283)
Q Consensus 148 -----------------------~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~----~~~v~~~t 200 (283)
.+.++.+.++++++++|+++|++||||||||||+|++.++..... ...+.+||
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~Ay~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~L~l~~~~~~l~~~~~vYT 359 (515)
T PLN02934 280 TKATSELKEEESKKNLLEMVERSAYYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTVLVLQEETEVMKRLLGVYT 359 (515)
T ss_pred hccccccccccccccccccchhhHHHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHHHHHhcccccccCceEEEE
Confidence 123478888999999999999999999999999999988765422 22468999
Q ss_pred ecCCCCCCHHHHHHHhccC----CCEEEEEECCCccCcCCCCCCCCCCCcceecCceEEEecCCCCccccccceeccCCC
Q 023358 201 FGQPRIGNAAFASYYTQLV----PNTFRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLYHIGLGSLIYEVEKICDGSG 276 (283)
Q Consensus 201 Fg~Prvgn~~fa~~~~~~~----~~~~riv~~~D~VP~lP~~~~~~~~~~y~H~g~ev~~~~~~~~~~~~~~~~~C~~~~ 276 (283)
||+|||||.+|++++++.. .+.+||+|.+|+||+||+... .++|+|.|+|+||++...+ | .+++..+
T Consensus 360 FGsPRVGN~~FA~~~~~~~~~~~~~~~RVVn~~DiVPrLP~~~~---~~gY~H~G~ev~y~s~y~~---~---~~~eep~ 430 (515)
T PLN02934 360 FGQPRIGNRQLGKFMEAQLNYPVPRYFRVVYCNDLVPRLPYDDK---TFLYKHFGVCLYYDSRYFG---Q---KMDEEPD 430 (515)
T ss_pred eCCCCccCHHHHHHHHHhhcCCCccEEEEEECCCcccccCCCCC---CcceEeCCeeEEEcCCCcc---c---cccccCC
Confidence 9999999999999998864 358999999999999997532 3689999999999764322 3 6676654
Q ss_pred CC
Q 023358 277 ED 278 (283)
Q Consensus 277 ed 278 (283)
++
T Consensus 431 ~n 432 (515)
T PLN02934 431 RN 432 (515)
T ss_pred CC
Confidence 43
No 9
>PLN02753 triacylglycerol lipase
Probab=100.00 E-value=6.3e-39 Score=302.68 Aligned_cols=224 Identities=30% Similarity=0.436 Sum_probs=172.9
Q ss_pred CCHHHHHHH---HHHHHHhcCCCCcccccccCCCCCC-----------CCCCcEEEEEEee-------------------
Q 023358 35 YNHTLATIL---VEYASAVYMSDLTELFTWTCSRCDG-----------LTKGFEIIELVVD------------------- 81 (283)
Q Consensus 35 y~~~~a~~l---~~~a~aaY~~~~~~~~~~~c~~~~~-----------~~~~~~~~~~~~d------------------- 81 (283)
-|+.+-+.+ -+|+.|+|..-..+.....|+.|.- ...+|++.+.++-
T Consensus 123 Ld~~LR~eiirYGe~~qA~YdaF~~d~~S~~~g~cry~~~~~f~~~~~~~~~Y~VTkylYATs~v~lp~~~~~~~~~~~w 202 (531)
T PLN02753 123 MDPILRSELIRYGEMAQACYDAFDFDPASKYCGTSRFSRLDFFDSLGMIDSGYEVARYLYATSNINLPNFFSKSRWSKVW 202 (531)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhccCCCCccccccccchhhHhHhhcCCCCCceEEEEEEeecCCCCchhhhcccccccc
Confidence 344444443 4888899964444455556777631 1236887776542
Q ss_pred -cccceEEEEEEECCC--------CeEEEEEcCCCcCChHHHHhhccccccccCCCC--C--CCceEehhhHHHHhcc--
Q 023358 82 -VQHCLQGFLGVAKDL--------NAIVIAFRGTQEHSIQNWIEDLFWKQLDINYPG--M--SDAMVHHGFYSAYHNT-- 146 (283)
Q Consensus 82 -~~~~~~~~v~~~~~~--------~~ivVafRGT~~~s~~d~~~Dl~~~~~~~~~~~--~--~~~~vH~Gf~~~~~~~-- 146 (283)
.++.+.|||+++.+. +.|||+||||. +..||++|+.+.+++.+.+. + .+++||+||++.|...
T Consensus 203 s~~snw~GYVAVs~De~~~~rlGRRdIVVAfRGT~--s~~DWl~DL~~~l~p~~~~~~~~~~~~~kVH~GFl~lYts~d~ 280 (531)
T PLN02753 203 SKNANWMGYVAVSDDETSRNRLGRRDIAIAWRGTV--TKLEWIADLKDYLKPVSENKIRCPDPAVKVESGFLDLYTDKDT 280 (531)
T ss_pred cccCCeeEEEEEeCCcccccccCCceEEEEECCCC--CHHHHHHHhhccccccCcccCCCCCCCcchhHhHHHHHhccCc
Confidence 246688999999875 47999999998 78999999987666544321 2 4689999999999732
Q ss_pred -------chHHHHHHHHHHHHHHcC-----CeEEEEeccChhHHHHHHHhHHhhhhc-C------CcceEEEEecCCCCC
Q 023358 147 -------TIRPAIINAVERAKDFYG-----DLNIMVTGHSMGGAMAAFCGLDLTVNL-G------IQNVQVMTFGQPRIG 207 (283)
Q Consensus 147 -------~~~~~i~~~l~~~~~~~~-----~~~i~vTGHSLGGalA~l~a~~l~~~~-~------~~~v~~~tFg~Prvg 207 (283)
.+++++++.|+++.++|+ +++|+|||||||||||+|+|.+++... . ...|.+||||+||||
T Consensus 281 ~s~~~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVG 360 (531)
T PLN02753 281 TCKFAKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVG 360 (531)
T ss_pred ccccchhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCcc
Confidence 468899999999998885 589999999999999999999997641 1 235789999999999
Q ss_pred CHHHHHHHhccCCCEEEEEECCCccCcCCCCCCC------------CCCCcceecCceEEEecCC
Q 023358 208 NAAFASYYTQLVPNTFRVTNYHDIVPHLPPYYSY------------FPQKTYHHFPREVWLYHIG 260 (283)
Q Consensus 208 n~~fa~~~~~~~~~~~riv~~~D~VP~lP~~~~~------------~~~~~y~H~g~ev~~~~~~ 260 (283)
|.+|++++++...+.+||+|..|+||++|+.+.. ...+.|.|+|.|++++...
T Consensus 361 N~aFA~~~~~l~~~~lRVVN~~DiVP~lP~~~~~~~~~~~l~~~~~~~~~~Y~hVG~EL~lD~~~ 425 (531)
T PLN02753 361 NVRFKDRMEELGVKVLRVVNVHDVVPKSPGLFLNESRPHALMKIAEGLPWCYSHVGEELALDHQN 425 (531)
T ss_pred CHHHHHHHHhcCCCEEEEEeCCCCcccCCchhccccccchhhhhccCCccceeeeeeEEeeCCCC
Confidence 9999999998877899999999999999986310 0126799999999997643
No 10
>PLN02408 phospholipase A1
Probab=100.00 E-value=6.2e-39 Score=294.32 Aligned_cols=224 Identities=26% Similarity=0.440 Sum_probs=174.0
Q ss_pred cCCHHHHHHH---HHHHHHhcCCCCcccccccCCCCCC-----------CCCCcEEEEEEeec-----------------
Q 023358 34 VYNHTLATIL---VEYASAVYMSDLTELFTWTCSRCDG-----------LTKGFEIIELVVDV----------------- 82 (283)
Q Consensus 34 ~y~~~~a~~l---~~~a~aaY~~~~~~~~~~~c~~~~~-----------~~~~~~~~~~~~d~----------------- 82 (283)
+-|+.|-+.+ -+|+.|+|..-..+.....|+.|.- ...+|++.+.++-+
T Consensus 15 Pld~~LR~~iirYGe~~qa~yd~f~~d~~s~~~g~cry~~~~~~~~~~~~~~~Y~vt~~lyAts~~~~p~~~~~~~~~~~ 94 (365)
T PLN02408 15 PLDDNLRGEILRYGDFVEAAYKSFDFDPSSPTYATCRFPKSTLLERSGLPNTGYRLTKHLRATSGIQLPRWIEKAPSWVA 94 (365)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHhhccCCCCccccccccchhhHHHHhCCCCCCceEEEEEEEecCCCCchhhhcccchhc
Confidence 3456665554 4888899864444455556766631 13468888766522
Q ss_pred -ccceEEEEEEECCCC--------eEEEEEcCCCcCChHHHHhhccccccccCCCC--------CCCceEehhhHHHHhc
Q 023358 83 -QHCLQGFLGVAKDLN--------AIVIAFRGTQEHSIQNWIEDLFWKQLDINYPG--------MSDAMVHHGFYSAYHN 145 (283)
Q Consensus 83 -~~~~~~~v~~~~~~~--------~ivVafRGT~~~s~~d~~~Dl~~~~~~~~~~~--------~~~~~vH~Gf~~~~~~ 145 (283)
++.+.|||+++.+.+ .|||+||||. +..||++|+.+.+++.+... ..+++||+||+..|..
T Consensus 95 ~~s~w~GyVAv~~d~~~i~rlGrrdIVVafRGT~--s~~dWi~DL~~~l~~~p~~~~~~~~~~~~~~~kVH~GFl~~Yts 172 (365)
T PLN02408 95 TQSSWIGYVAVCQDKEEIARLGRRDVVIAFRGTA--TCLEWLENLRATLTRLPNAPTDMNGSGDGSGPMVESGFLSLYTS 172 (365)
T ss_pred cccceeEEEEEccCcchhhccCCceEEEEEcCCC--CHHHHHHHhhhceeecCCCCccccccCCCCCCeecHhHHHHHhc
Confidence 355789999988654 5799999998 78999999988776543211 1367999999999973
Q ss_pred c-----chHHHHHHHHHHHHHHcCC--eEEEEeccChhHHHHHHHhHHhhhhcCC-cceEEEEecCCCCCCHHHHHHHhc
Q 023358 146 T-----TIRPAIINAVERAKDFYGD--LNIMVTGHSMGGAMAAFCGLDLTVNLGI-QNVQVMTFGQPRIGNAAFASYYTQ 217 (283)
Q Consensus 146 ~-----~~~~~i~~~l~~~~~~~~~--~~i~vTGHSLGGalA~l~a~~l~~~~~~-~~v~~~tFg~Prvgn~~fa~~~~~ 217 (283)
. .+++++.+.|+++.++|++ .+|+|||||||||||+|+|.++...... ..+.+||||+|||||.+|++++++
T Consensus 173 ~~~~~~s~r~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPRVGN~~Fa~~~~~ 252 (365)
T PLN02408 173 GTAMGPSLQEMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPRVGNRSFRRQLEK 252 (365)
T ss_pred ccccchhHHHHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCCcccHHHHHHHHh
Confidence 2 4688999999999999985 4699999999999999999999886432 358899999999999999999998
Q ss_pred cCCCEEEEEECCCccCcCCCCCCC-------------------------CCCCcceecCceEEEecC
Q 023358 218 LVPNTFRVTNYHDIVPHLPPYYSY-------------------------FPQKTYHHFPREVWLYHI 259 (283)
Q Consensus 218 ~~~~~~riv~~~D~VP~lP~~~~~-------------------------~~~~~y~H~g~ev~~~~~ 259 (283)
...+++||+|.+|+||++|+.+.. ...++|.|+|.|+-++..
T Consensus 253 ~~~~~lRVvN~~D~VP~vP~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~Y~hVG~el~ld~~ 319 (365)
T PLN02408 253 QGTKVLRIVNSDDVITKVPGFVIDGENDVAKKRDVNVAGLPSWIQKRVEDTQWVYAEVGRELRLSSK 319 (365)
T ss_pred cCCcEEEEEeCCCCcccCCCcccCccccccccccccccccchhhhhcccccCcceeecceeEEecCC
Confidence 877899999999999999975211 012689999999999854
No 11
>PLN02571 triacylglycerol lipase
Probab=100.00 E-value=9.3e-39 Score=296.61 Aligned_cols=219 Identities=26% Similarity=0.447 Sum_probs=167.6
Q ss_pred ccCCHHHHHHH---HHHHHHhcCCCCcccccccCCCCC--------------CCCCCcEEEEEEee--------------
Q 023358 33 QVYNHTLATIL---VEYASAVYMSDLTELFTWTCSRCD--------------GLTKGFEIIELVVD-------------- 81 (283)
Q Consensus 33 ~~y~~~~a~~l---~~~a~aaY~~~~~~~~~~~c~~~~--------------~~~~~~~~~~~~~d-------------- 81 (283)
.+-|+.|-+.+ -+|+.|+|..-........|+.|. ..+.+|++...++-
T Consensus 36 dPld~~LR~~ii~YGe~~qa~yd~f~~~~~s~~~g~~ry~~~~~~~~~~~~~~~~~~Y~vT~~lyAts~~~~p~~~~~~~ 115 (413)
T PLN02571 36 DPLDQDLREYIIHYGEMAQATYDTFNIQKASKFAGSSLYAKKDFFAKVGLEKGNPYKYKVTKFLYATSQIHVPEAFILKS 115 (413)
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHhccCCCCccccccccchhHHHHhccccccCCCCceEeeeEEecccCCCcchhhccc
Confidence 34566666654 488888886433344444565552 11235666554431
Q ss_pred -------cccceEEEEEEECCC-------CeEEEEEcCCCcCChHHHHhhccccccccCC--CC-CCCceEehhhHHHHh
Q 023358 82 -------VQHCLQGFLGVAKDL-------NAIVIAFRGTQEHSIQNWIEDLFWKQLDINY--PG-MSDAMVHHGFYSAYH 144 (283)
Q Consensus 82 -------~~~~~~~~v~~~~~~-------~~ivVafRGT~~~s~~d~~~Dl~~~~~~~~~--~~-~~~~~vH~Gf~~~~~ 144 (283)
.++.+.|||+++++. +.||||||||. +..||++|+.+.+++..- +. ..+++||+||++.|.
T Consensus 116 ~~~~~ws~~s~w~GYVAv~~de~~~~lGrrdIVVAfRGT~--t~~eWi~Dl~~~lv~~~~~~g~~~~~~kVH~GF~~~Yt 193 (413)
T PLN02571 116 LSREAWSKESNWMGYVAVATDEGKALLGRRDIVIAWRGTV--QTLEWVNDFEFNLVSASKIFGESNDQPKVHQGWYSIYT 193 (413)
T ss_pred cccccccccCceeEEEEEeCCccccccCCceEEEEEcCCC--CHHHHHHhcccceeccccccCCCCCCceeeehHHHhhh
Confidence 235689999999865 47999999998 789999999987765421 11 135899999999996
Q ss_pred c---------cchHHHHHHHHHHHHHHcCC--eEEEEeccChhHHHHHHHhHHhhhh-cC--------CcceEEEEecCC
Q 023358 145 N---------TTIRPAIINAVERAKDFYGD--LNIMVTGHSMGGAMAAFCGLDLTVN-LG--------IQNVQVMTFGQP 204 (283)
Q Consensus 145 ~---------~~~~~~i~~~l~~~~~~~~~--~~i~vTGHSLGGalA~l~a~~l~~~-~~--------~~~v~~~tFg~P 204 (283)
. ..+++++++.|+++.++|++ .+|+|||||||||||+|+|+++... +. ...|.++|||+|
T Consensus 194 s~~~~~~~~k~Sar~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsP 273 (413)
T PLN02571 194 SDDERSPFNKTSARDQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASP 273 (413)
T ss_pred ccccccccchhhHHHHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCC
Confidence 3 24678999999999999886 4799999999999999999999764 11 124789999999
Q ss_pred CCCCHHHHHHHhccC-CCEEEEEECCCccCcCCCCCCCCCCCcceecCceEEEecCC
Q 023358 205 RIGNAAFASYYTQLV-PNTFRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLYHIG 260 (283)
Q Consensus 205 rvgn~~fa~~~~~~~-~~~~riv~~~D~VP~lP~~~~~~~~~~y~H~g~ev~~~~~~ 260 (283)
||||.+|++++++.. .+.+||+|.+|+||++|| ++|.|+|.|+||+...
T Consensus 274 RVGN~~Fa~~~~~~~~~~~~RVvN~~DiVP~lP~-------~gY~HvG~El~id~~~ 323 (413)
T PLN02571 274 RVGDSDFKKLFSGLKDLRVLRVRNLPDVIPNYPL-------IGYSDVGEELPIDTRK 323 (413)
T ss_pred CccCHHHHHHHhcccCccEEEEEeCCCCCCcCCC-------CCCEecceEEEEeCCC
Confidence 999999999998864 468999999999999997 4899999999997543
No 12
>PLN02719 triacylglycerol lipase
Probab=100.00 E-value=1.3e-38 Score=299.81 Aligned_cols=224 Identities=29% Similarity=0.433 Sum_probs=171.2
Q ss_pred CCHHHHHHH---HHHHHHhcCCCCcccccccCCCCCC-----------CCCCcEEEEEEee-------------------
Q 023358 35 YNHTLATIL---VEYASAVYMSDLTELFTWTCSRCDG-----------LTKGFEIIELVVD------------------- 81 (283)
Q Consensus 35 y~~~~a~~l---~~~a~aaY~~~~~~~~~~~c~~~~~-----------~~~~~~~~~~~~d------------------- 81 (283)
-|+.|-+.+ =+||.|+|..-..+.....|+.|.- ...+|++.+.++-
T Consensus 108 Ld~~LR~eiirYGe~~qA~YdaF~~d~~S~~~g~cry~~~~l~~~~~~~~~~Y~VTkylYAts~v~lp~~~~~~~~~~~w 187 (518)
T PLN02719 108 MDPVLRSELIRYGEMAQACYDAFDFDPFSRYCGSCRFTRRHLFDSLGIIDSGYEVARYLYATSNINLPNFFSKSRWSKVW 187 (518)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhhccCcCCccccccccchhhHHHhcCCCCCCceEEEEEEecCCCCcchhhccccccccc
Confidence 344444443 4888899864344455556766631 1246888876652
Q ss_pred -cccceEEEEEEECCCC---------eEEEEEcCCCcCChHHHHhhccccccccCCC--CC--CCceEehhhHHHHhc--
Q 023358 82 -VQHCLQGFLGVAKDLN---------AIVIAFRGTQEHSIQNWIEDLFWKQLDINYP--GM--SDAMVHHGFYSAYHN-- 145 (283)
Q Consensus 82 -~~~~~~~~v~~~~~~~---------~ivVafRGT~~~s~~d~~~Dl~~~~~~~~~~--~~--~~~~vH~Gf~~~~~~-- 145 (283)
.++.+.|||+++.+.+ .|||+||||. +..||++|+.+...+.... .+ ++++||+||+..|..
T Consensus 188 s~~snw~GYVAVs~de~~~~~rlGRRdIVVAfRGT~--t~~eWi~DL~~~l~p~~~~~~~c~~~~~kVH~GFls~Yts~~ 265 (518)
T PLN02719 188 SKNANWIGYVAVSDDDEATRCRLGRRDIAIAWRGTV--TRLEWIADLKDFLKPVSGNGFRCPDPAVKAESGFLDLYTDKD 265 (518)
T ss_pred ccCCCceEEEEEcCCcccchhccCCceEEEEEcCCC--CchhhhhhccccceeccccccCCCCCCceeehhHHHHHhccc
Confidence 2466889999988744 4999999998 7899999998755443211 12 368999999999963
Q ss_pred -------cchHHHHHHHHHHHHHHcCC-----eEEEEeccChhHHHHHHHhHHhhhhc-------CCcceEEEEecCCCC
Q 023358 146 -------TTIRPAIINAVERAKDFYGD-----LNIMVTGHSMGGAMAAFCGLDLTVNL-------GIQNVQVMTFGQPRI 206 (283)
Q Consensus 146 -------~~~~~~i~~~l~~~~~~~~~-----~~i~vTGHSLGGalA~l~a~~l~~~~-------~~~~v~~~tFg~Prv 206 (283)
..+++++++.|++++++||+ ++|+|||||||||||+|+|++++... ....|.+||||+|||
T Consensus 266 ~~s~~~k~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRV 345 (518)
T PLN02719 266 TCCNFSKFSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRV 345 (518)
T ss_pred ccccccchhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCc
Confidence 24688999999999998875 69999999999999999999997641 123488999999999
Q ss_pred CCHHHHHHHhccCCCEEEEEECCCccCcCCCCCCC------------CCCCcceecCceEEEecCC
Q 023358 207 GNAAFASYYTQLVPNTFRVTNYHDIVPHLPPYYSY------------FPQKTYHHFPREVWLYHIG 260 (283)
Q Consensus 207 gn~~fa~~~~~~~~~~~riv~~~D~VP~lP~~~~~------------~~~~~y~H~g~ev~~~~~~ 260 (283)
||.+|++++++...+++||+|..|+||++|+.+.. ...+.|.|+|.|++++...
T Consensus 346 GN~~Fa~~~~~~~~~~lRVvN~~D~VP~lP~~~~~~~~~~~l~~~~~~~~~~Y~hVG~eL~ld~~~ 411 (518)
T PLN02719 346 GNIRFKERIEELGVKVLRVVNEHDVVAKSPGLFLNERAPQALMKLAGGLPWCYSHVGEMLPLDHQK 411 (518)
T ss_pred cCHHHHHHHHhcCCcEEEEEeCCCCcccCCchhccccccchhhhcccCCccceeeeeEEEEEcCCC
Confidence 99999999998877899999999999999986310 0025799999999997643
No 13
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=100.00 E-value=1.4e-38 Score=293.48 Aligned_cols=243 Identities=35% Similarity=0.498 Sum_probs=184.3
Q ss_pred CccCCHHHHH-HHHHHHHHhcCCCCcccccccCC-----CCCCCCCCcEEEEEEee-cccceEEEEEEECCCCeEEEEEc
Q 023358 32 PQVYNHTLAT-ILVEYASAVYMSDLTELFTWTCS-----RCDGLTKGFEIIELVVD-VQHCLQGFLGVAKDLNAIVIAFR 104 (283)
Q Consensus 32 ~~~y~~~~a~-~l~~~a~aaY~~~~~~~~~~~c~-----~~~~~~~~~~~~~~~~d-~~~~~~~~v~~~~~~~~ivVafR 104 (283)
...||+...+ ....+++++|..+++.+....-+ ....+++.+ +.... .++.+.+|++++++++.|+||||
T Consensus 36 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~gy~av~~d~~~IvvafR 112 (336)
T KOG4569|consen 36 AFSYDDNSVRNGFLALSASAFFSDPQLCLDSKFSVYKATSKINLPSIF---CDLVGSYQSNCSGYTAVSDDRKAIVVAFR 112 (336)
T ss_pred ccccCCcccceeeccchhhhcccCcccccccCcccceeeeeeeccccc---ccccccccCceEEEEEEecCCcEEEEEEc
Confidence 3445555443 35677888887766543321110 001111100 01111 34667899999999999999999
Q ss_pred CCCcCChHHHHhhccccccccCCCCCCCceEehhhHHHHhccchHHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHh
Q 023358 105 GTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCG 184 (283)
Q Consensus 105 GT~~~s~~d~~~Dl~~~~~~~~~~~~~~~~vH~Gf~~~~~~~~~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a 184 (283)
||. +..+|+.|+.....+..-....+++|++||++.+.. .+..++.+.++.++..+|+++|++||||||||||+|+|
T Consensus 113 Gt~--~~~q~~~e~~~~~~~~~~~~~~~g~v~~~f~~~~~~-~~~~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa 189 (336)
T KOG4569|consen 113 GTN--TPLQWIAEFDKSLFPSKPFFPDGGKVEAYFLDAYTS-LWNSGLDAELRRLIELYPNYSIWVTGHSLGGALASLAA 189 (336)
T ss_pred cCC--ChHHHHHHHHhhhccccccccCCceEEEeccchhcc-ccHHHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHH
Confidence 999 779999998765554433333689999999999984 34478899999999999999999999999999999999
Q ss_pred HHhhhhcC--CcceEEEEecCCCCCCHHHHHHHhccCCCEEEEEECCCccCcCCCCCCCCCCCcceecCceEE-EecCCC
Q 023358 185 LDLTVNLG--IQNVQVMTFGQPRIGNAAFASYYTQLVPNTFRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVW-LYHIGL 261 (283)
Q Consensus 185 ~~l~~~~~--~~~v~~~tFg~Prvgn~~fa~~~~~~~~~~~riv~~~D~VP~lP~~~~~~~~~~y~H~g~ev~-~~~~~~ 261 (283)
.+++.+.. ..+++++|||+|||||.+|++++++..++++||||.+|+|||+|+.........|.|+++|+| +++.+.
T Consensus 190 ~~i~~~~~~~~~~v~v~tFG~PRvGn~~fa~~~d~~~~~s~Rvv~~~DiVP~lP~~~~~~g~~~~~h~~~ei~~~~~~~~ 269 (336)
T KOG4569|consen 190 LDLVKNGLKTSSPVKVYTFGQPRVGNLAFAEWHDELVPYSFRVVHRRDIVPHLPGIVSHVGTELYYHHRTEVWLYNNNMN 269 (336)
T ss_pred HHHHHcCCCCCCceEEEEecCCCcccHHHHHHHHhhCCcEEEEEcCCCCCCCCCCccccCCcccccccCcceeccccccC
Confidence 99988743 368999999999999999999999999999999999999999999853334678999999999 776553
Q ss_pred CccccccceeccCC-CCCCCCCC
Q 023358 262 GSLIYEVEKICDGS-GEDPSCSR 283 (283)
Q Consensus 262 ~~~~~~~~~~C~~~-~ed~~Cs~ 283 (283)
...+| .+|++. ++++.|||
T Consensus 270 ~~~~~---~~c~~~~~~~~~cs~ 289 (336)
T KOG4569|consen 270 LEDPY---HICDGADGEDPLCSD 289 (336)
T ss_pred cccce---ehhccCCCCCccccc
Confidence 32345 899987 44468986
No 14
>PLN00413 triacylglycerol lipase
Probab=100.00 E-value=1.1e-36 Score=285.04 Aligned_cols=169 Identities=25% Similarity=0.372 Sum_probs=136.4
Q ss_pred ccceEEEEEEEC--CCCeEEEEEcCCCcCChHHHHhhccccccccCCCCCCCceEehhhHHHHhcc--------------
Q 023358 83 QHCLQGFLGVAK--DLNAIVIAFRGTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNT-------------- 146 (283)
Q Consensus 83 ~~~~~~~v~~~~--~~~~ivVafRGT~~~s~~d~~~Dl~~~~~~~~~~~~~~~~vH~Gf~~~~~~~-------------- 146 (283)
..++|+|++.|. +.+.|||+||||++.++.||++|+++...+. ...++||.||++++...
T Consensus 184 ~~~tqa~~~~D~~~d~n~IVVAFRGT~p~s~~DWitDldf~~~~~----~~~gkVH~GF~~Al~~~k~~w~~~~~~~~~~ 259 (479)
T PLN00413 184 QRSTEVIVIKDTKDDPNLIIVSFRGTDPFDADDWCTDLDLSWHEV----KNVGKIHGGFMKALGLPKEGWPEEINLDETQ 259 (479)
T ss_pred cccceEEEEEcccCCCCeEEEEecCCCCCCHHHHHhhccccccCC----CCCceeehhHHHhhccccccccccccccccc
Confidence 345788998764 4579999999999778999999998754432 25689999999987410
Q ss_pred -----chHHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcC----CcceEEEEecCCCCCCHHHHHHHhc
Q 023358 147 -----TIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLG----IQNVQVMTFGQPRIGNAAFASYYTQ 217 (283)
Q Consensus 147 -----~~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~----~~~v~~~tFg~Prvgn~~fa~~~~~ 217 (283)
....++.+.++++.+++|+++|++||||||||||+++|.++....+ .....+||||+|||||.+|++++++
T Consensus 260 ~~~~~~ayy~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRVGN~~FA~~~~~ 339 (479)
T PLN00413 260 NATSLLAYYTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRVGDEDFGIFMKD 339 (479)
T ss_pred ccchhhhHHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCCccHHHHHHHHh
Confidence 0233678888999999999999999999999999999998764311 2234799999999999999999987
Q ss_pred cC----CCEEEEEECCCccCcCCCCCCCCCCCcceecCceEEEec
Q 023358 218 LV----PNTFRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLYH 258 (283)
Q Consensus 218 ~~----~~~~riv~~~D~VP~lP~~~~~~~~~~y~H~g~ev~~~~ 258 (283)
.. .+.+||+|.+|+|||||+.-. .++|+|+|+|+||++
T Consensus 340 ~l~~~~~~~~RvVn~~DiVPrLP~~~~---~~~y~H~G~el~yds 381 (479)
T PLN00413 340 KLKEFDVKYERYVYCNDMVPRLPFDDK---TLMFKHFGACLYCDS 381 (479)
T ss_pred hhcccCcceEEEEECCCccCCcCCCCC---CCceEecceEEEEec
Confidence 64 258999999999999998521 358999999999965
No 15
>PLN02162 triacylglycerol lipase
Probab=100.00 E-value=6.4e-36 Score=279.09 Aligned_cols=169 Identities=26% Similarity=0.357 Sum_probs=135.6
Q ss_pred cceEEEEEEEC--CCCeEEEEEcCCCcCChHHHHhhccccccccCCCCCCCceEehhhHHHHhcc---------------
Q 023358 84 HCLQGFLGVAK--DLNAIVIAFRGTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNT--------------- 146 (283)
Q Consensus 84 ~~~~~~v~~~~--~~~~ivVafRGT~~~s~~d~~~Dl~~~~~~~~~~~~~~~~vH~Gf~~~~~~~--------------- 146 (283)
..+|+|++.++ +.+.|||+||||++.+..||++|+++...+ .+..|+||+||+++|...
T Consensus 183 ~~TQafv~~d~~~d~~~IVVAFRGT~~~~~~DWiTDld~s~~~----~~~~GkVH~GF~~A~~~~~~~~~p~~~~~~~~~ 258 (475)
T PLN02162 183 KLTQAFVFKTSSTNPDLIVVSFRGTEPFEAADWCTDLDLSWYE----LKNVGKVHAGFSRALGLQKDGGWPKENISLLHQ 258 (475)
T ss_pred cccceEEEEeccCCCceEEEEEccCCCCcHHHHHhhcCcceec----CCCCeeeeHHHHHHHHhhhcccccccccchhhh
Confidence 35678998874 558999999999976679999999876543 234699999999998511
Q ss_pred chHHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcC----CcceEEEEecCCCCCCHHHHHHHhccC---
Q 023358 147 TIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLG----IQNVQVMTFGQPRIGNAAFASYYTQLV--- 219 (283)
Q Consensus 147 ~~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~----~~~v~~~tFg~Prvgn~~fa~~~~~~~--- 219 (283)
....++.+.++++.+++|+++|++||||||||||+|+|..+..... .....+||||+|||||.+|++++++..
T Consensus 259 ~ay~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRVGn~~FA~~~~~~~~~~ 338 (475)
T PLN02162 259 YAYYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRVGDEDFGEFMKGVVKKH 338 (475)
T ss_pred hhHHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCccCHHHHHHHHhhhhcC
Confidence 0123567778888888999999999999999999999988875421 123579999999999999999998753
Q ss_pred -CCEEEEEECCCccCcCCCCCCCCCCCcceecCceEEEec
Q 023358 220 -PNTFRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLYH 258 (283)
Q Consensus 220 -~~~~riv~~~D~VP~lP~~~~~~~~~~y~H~g~ev~~~~ 258 (283)
.+.+||+|.+|+||++|+..+. .++|+|.|+.+++++
T Consensus 339 ~~~~~RvVn~nDiVPrlP~~~~~--~~gY~H~G~c~y~~s 376 (475)
T PLN02162 339 GIEYERFVYNNDVVPRVPFDDKL--LFSYKHYGPCNSFNS 376 (475)
T ss_pred CCceEEEEeCCCcccccCCCCcc--cceeEECCccceeec
Confidence 3478999999999999986321 258999999999876
No 16
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=100.00 E-value=4.1e-32 Score=219.58 Aligned_cols=136 Identities=40% Similarity=0.682 Sum_probs=115.6
Q ss_pred EEEEcCCCcCChHHHHhhccccccccCCCCCCCceEehhhHHHHhccchHHHHHHHHHHHHHHcCCeEEEEeccChhHHH
Q 023358 100 VIAFRGTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGGAM 179 (283)
Q Consensus 100 vVafRGT~~~s~~d~~~Dl~~~~~~~~~~~~~~~~vH~Gf~~~~~~~~~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGal 179 (283)
||+||||. +..||++|+.............++++|+||++.+. ..+.+++.+.++++.+++++++|++||||||||+
T Consensus 1 vva~RGT~--s~~d~~~d~~~~~~~~~~~~~~~~~vh~g~~~~~~-~~~~~~~~~~l~~~~~~~~~~~i~itGHSLGGal 77 (140)
T PF01764_consen 1 VVAFRGTN--SPSDWLTDLDAWPVSWSSFLLDGGRVHSGFLDAAE-DSLYDQILDALKELVEKYPDYSIVITGHSLGGAL 77 (140)
T ss_dssp EEEEEESS--SHHHHHHHTHHCEEECTTSTTCTHEEEHHHHHHHH-CHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHH
T ss_pred eEEEECCC--CHHHHHHhcccCceeccccccCceEEehhHHHHHH-HHHHHHHHHHHHHHHhcccCccchhhccchHHHH
Confidence 79999998 89999999987766544332237999999999997 2467889999999999999999999999999999
Q ss_pred HHHHhHHhhhhcCC--cceEEEEecCCCCCCHHHHHHHhccCCC-EEEEEECCCccCcCCCC
Q 023358 180 AAFCGLDLTVNLGI--QNVQVMTFGQPRIGNAAFASYYTQLVPN-TFRVTNYHDIVPHLPPY 238 (283)
Q Consensus 180 A~l~a~~l~~~~~~--~~v~~~tFg~Prvgn~~fa~~~~~~~~~-~~riv~~~D~VP~lP~~ 238 (283)
|+++++++...... .++++++||+||+||..|++++++.... ++||+|.+|+||++|+.
T Consensus 78 A~l~a~~l~~~~~~~~~~~~~~~fg~P~~~~~~~~~~~~~~~~~~~~~iv~~~D~Vp~~p~~ 139 (140)
T PF01764_consen 78 ASLAAADLASHGPSSSSNVKCYTFGAPRVGNSAFAKWYDSLFNRNIFRIVNQNDIVPRLPPC 139 (140)
T ss_dssp HHHHHHHHHHCTTTSTTTEEEEEES-S--BEHHHHHHHHHHTSCGEEEEEETTBSGGGTS-G
T ss_pred HHHHHHhhhhcccccccceeeeecCCccccCHHHHHHHHhhCCCeEEEEEECCCEeeecCCC
Confidence 99999999876443 7899999999999999999999987754 99999999999999974
No 17
>PLN02847 triacylglycerol lipase
Probab=99.95 E-value=1.1e-27 Score=228.38 Aligned_cols=146 Identities=21% Similarity=0.223 Sum_probs=125.1
Q ss_pred eEEEEEEECCCCeEEEEEcCCCcCChHHHHhhccccccccCCC-----C---CCCceEehhhHHHHhccchHHHHHHHHH
Q 023358 86 LQGFLGVAKDLNAIVIAFRGTQEHSIQNWIEDLFWKQLDINYP-----G---MSDAMVHHGFYSAYHNTTIRPAIINAVE 157 (283)
Q Consensus 86 ~~~~v~~~~~~~~ivVafRGT~~~s~~d~~~Dl~~~~~~~~~~-----~---~~~~~vH~Gf~~~~~~~~~~~~i~~~l~ 157 (283)
...||++|++.+.|||+||||. |+.||++|+....+++... + ...+.+|+||+.++. ++.+.+...|+
T Consensus 167 PaffVavDh~~K~IVVsIRGT~--Si~D~LTDL~~~~vPf~~s~l~~gG~~n~~~G~AH~Gml~AAr--wI~~~i~~~L~ 242 (633)
T PLN02847 167 PAFTIIRDENSKCFLLLIRGTH--SIKDTLTAATGAVVPFHHSVLHDGGVSNLVLGYAHCGMVAAAR--WIAKLSTPCLL 242 (633)
T ss_pred CCeEEEEeCCCCEEEEEECCCC--CHHHHHHhcccccccCCcccccccCcccCcCCccCccHHHHHH--HHHHHHHHHHH
Confidence 4578999999999999999998 8999999998665543211 1 124689999999998 67888888888
Q ss_pred HHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCCCCHHHHHHHhccCCCEEEEEECCCccCcCCC
Q 023358 158 RAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFASYYTQLVPNTFRVTNYHDIVPHLPP 237 (283)
Q Consensus 158 ~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prvgn~~fa~~~~~~~~~~~riv~~~D~VP~lP~ 237 (283)
++.+++|+|+|+|||||||||+|+|+++.|.......++.||+||+|.+.+..++.+... .+++|||++|+||||++
T Consensus 243 kal~~~PdYkLVITGHSLGGGVAALLAilLRe~~~fssi~CyAFgPp~cvS~eLAe~~k~---fVTSVVng~DIVPRLS~ 319 (633)
T PLN02847 243 KALDEYPDFKIKIVGHSLGGGTAALLTYILREQKEFSSTTCVTFAPAACMTWDLAESGKH---FITTIINGSDLVPTFSA 319 (633)
T ss_pred HHHHHCCCCeEEEeccChHHHHHHHHHHHHhcCCCCCCceEEEecCchhcCHHHHHHhhh---heEEEEeCCCCCccCCH
Confidence 889999999999999999999999999998765566789999999999999999888764 46899999999999997
Q ss_pred C
Q 023358 238 Y 238 (283)
Q Consensus 238 ~ 238 (283)
.
T Consensus 320 ~ 320 (633)
T PLN02847 320 A 320 (633)
T ss_pred H
Confidence 4
No 18
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.92 E-value=1.4e-24 Score=178.73 Aligned_cols=117 Identities=39% Similarity=0.545 Sum_probs=102.8
Q ss_pred hhhHHHHhccchHHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCCCCHHHH--HH
Q 023358 137 HGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFA--SY 214 (283)
Q Consensus 137 ~Gf~~~~~~~~~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prvgn~~fa--~~ 214 (283)
+||+.++. .+...+.+.+++...++|+++|++|||||||++|.++++++....+...+.++|||+|++|+..++ ..
T Consensus 1 ~Gf~~~~~--~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~~~~~~~~ 78 (153)
T cd00741 1 KGFYKAAR--SLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNAAFAEDRL 78 (153)
T ss_pred CchHHHHH--HHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccchHHHHHhh
Confidence 48999998 678888888888888899999999999999999999999987654456889999999999999998 35
Q ss_pred HhccCCCEEEEEECCCccCcCCCCCCCCCCCcceecCceEEEecCC
Q 023358 215 YTQLVPNTFRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLYHIG 260 (283)
Q Consensus 215 ~~~~~~~~~riv~~~D~VP~lP~~~~~~~~~~y~H~g~ev~~~~~~ 260 (283)
.+.....++||++.+|+||++|+. .++|.|.+.|+|+++..
T Consensus 79 ~~~~~~~~~~i~~~~D~v~~~p~~-----~~~~~~~~~~~~~~~~~ 119 (153)
T cd00741 79 DPSDALFVDRIVNDNDIVPRLPPG-----GEGYPHGGAEFYINGGK 119 (153)
T ss_pred hccCCccEEEEEECCCccCCCCCC-----cCCCeecceEEEECCCC
Confidence 555557899999999999999986 47999999999998765
No 19
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=99.71 E-value=1.8e-16 Score=138.37 Aligned_cols=133 Identities=20% Similarity=0.304 Sum_probs=97.1
Q ss_pred ccceEEEEEEECCCCeEEEEEcCCCcCChHHHHhhccccccccCCCCCCCceEehhhHHHHhccchHHHHHHHHHHHHHH
Q 023358 83 QHCLQGFLGVAKDLNAIVIAFRGTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNTTIRPAIINAVERAKDF 162 (283)
Q Consensus 83 ~~~~~~~v~~~~~~~~ivVafRGT~~~s~~d~~~Dl~~~~~~~~~~~~~~~~vH~Gf~~~~~~~~~~~~i~~~l~~~~~~ 162 (283)
.++..+.++..+ .+.++||||||+. ++.||.+|+...... .. .-+....+.++++.++
T Consensus 24 ~~qF~A~~f~~~-~~~~~vaFRGTd~-t~~~W~ed~~~~~~~-~~-------------------~~q~~A~~yl~~~~~~ 81 (224)
T PF11187_consen 24 EKQFSAVTFRLP-DGEYVVAFRGTDD-TLVDWKEDFNMSFQD-ET-------------------PQQKSALAYLKKIAKK 81 (224)
T ss_pred ccCcEEEEEEeC-CCeEEEEEECCCC-chhhHHHHHHhhcCC-CC-------------------HHHHHHHHHHHHHHHh
Confidence 456667776655 5789999999974 789999998653211 00 1133556777778788
Q ss_pred cCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCCCCHHHH-HHHhccCCCEEEEEECCCccCcCCCC
Q 023358 163 YGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFA-SYYTQLVPNTFRVTNYHDIVPHLPPY 238 (283)
Q Consensus 163 ~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prvgn~~fa-~~~~~~~~~~~riv~~~D~VP~lP~~ 238 (283)
+++ +|++|||||||.||+.+++.+.......-.++|+|.+|........ ..++...+++.+++...|+|..|-..
T Consensus 82 ~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~~~~~~~~~~~~~~~kI~~~vp~~siVg~ll~~ 157 (224)
T PF11187_consen 82 YPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFSEEFLESPGYQRIKDKIHNYVPQSSIVGMLLEH 157 (224)
T ss_pred CCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCChhhcccHhHHHHhhhhEEEcCCcceecccccC
Confidence 877 4999999999999999999876554444568999999998654333 23344456788999999999998653
No 20
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=99.40 E-value=1.8e-12 Score=114.19 Aligned_cols=183 Identities=19% Similarity=0.253 Sum_probs=107.4
Q ss_pred CCHHHHHHHHHHHHHhcCCCCcccccccCCCCCCCCCCc--EEEEEEeecccceEEEEEEECCCCeEEEEEcCCCc----
Q 023358 35 YNHTLATILVEYASAVYMSDLTELFTWTCSRCDGLTKGF--EIIELVVDVQHCLQGFLGVAKDLNAIVIAFRGTQE---- 108 (283)
Q Consensus 35 y~~~~a~~l~~~a~aaY~~~~~~~~~~~c~~~~~~~~~~--~~~~~~~d~~~~~~~~v~~~~~~~~ivVafRGT~~---- 108 (283)
-|+.....+.+|++.+|-+-+. .-.| .++.+.| .+.+.+.....+..|-|+.++.+..|+++.+||..
T Consensus 130 tDr~t~~sl~~MssNaY~~ip~-dgdw-----~nv~~~wn~T~pe~FGwdgDGlRghVF~nd~~~vv~~~~kgtSi~Gl~ 203 (425)
T KOG4540|consen 130 TDRVTLLSLIEMSSNAYHSIPL-DGDW-----RNVTEPWNETVPETFGWDGDGLRGHVFGNDGKIVVAFKGKGTSIMGLE 203 (425)
T ss_pred cchHHHHHHHHhhccceecCCC-CCcc-----cccCCCcccCCccccCcCCCCceeeeeccCCceEEEEEeccceEEeec
Confidence 4666777789999999976332 2334 2222222 22334555567889999988877777777777642
Q ss_pred ---CChHHHHhhc-cc----cccccCCCCCCCceEehh-----h----HHHHhccchHHHHHHHHHHHHHHcCCeEEEEe
Q 023358 109 ---HSIQNWIEDL-FW----KQLDINYPGMSDAMVHHG-----F----YSAYHNTTIRPAIINAVERAKDFYGDLNIMVT 171 (283)
Q Consensus 109 ---~s~~d~~~Dl-~~----~~~~~~~~~~~~~~vH~G-----f----~~~~~~~~~~~~i~~~l~~~~~~~~~~~i~vT 171 (283)
+|-+|-+.|- -+ ..+...+..+.+|.+.+- . .+.+. ......++.+..+++.||+.+||+|
T Consensus 204 g~gTs~kDk~nDnlLfScCcarvs~~wttvc~cy~~sy~c~~~ClE~eir~~d--ryySa~ldI~~~v~~~Ypda~iwlT 281 (425)
T KOG4540|consen 204 GGGTSRKDKLNDNLLFSCCCARVSYLWTTVCDCYVKSYICDKECLEEEIREFD--RYYSAALDILGAVRRIYPDARIWLT 281 (425)
T ss_pred cCCccccccchhhHHHHHHhhhhhhhhhhhcchhcccccccHHHHHHHHHhhc--chhHHHHHHHHHHHHhCCCceEEEe
Confidence 2345655551 11 111111111122211100 0 00111 2234566777777888999999999
Q ss_pred ccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCCCCHHHHHHHhccC--------CCEEEEEECCCccCc
Q 023358 172 GHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFASYYTQLV--------PNTFRVTNYHDIVPH 234 (283)
Q Consensus 172 GHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prvgn~~fa~~~~~~~--------~~~~riv~~~D~VP~ 234 (283)
|||||||+|+|++..+ .+.+++|.+|. +.--++.+.--. ..++++-|..|+|=+
T Consensus 282 GHSLGGa~AsLlG~~f-------glP~VaFesPG--d~~aa~rLhLp~ppglpd~~~~iwHfGhnaDpif~ 343 (425)
T KOG4540|consen 282 GHSLGGAIASLLGIRF-------GLPVVAFESPG--DAYAANRLHLPDPPGLPDNMEGIWHFGHNADPIFR 343 (425)
T ss_pred ccccchHHHHHhcccc-------CCceEEecCch--hhhhhhccCCCCCCCCCccccceEEeccCCCceEe
Confidence 9999999999999854 56789999994 332222222111 137888888888743
No 21
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=99.40 E-value=1.8e-12 Score=114.19 Aligned_cols=183 Identities=19% Similarity=0.253 Sum_probs=107.4
Q ss_pred CCHHHHHHHHHHHHHhcCCCCcccccccCCCCCCCCCCc--EEEEEEeecccceEEEEEEECCCCeEEEEEcCCCc----
Q 023358 35 YNHTLATILVEYASAVYMSDLTELFTWTCSRCDGLTKGF--EIIELVVDVQHCLQGFLGVAKDLNAIVIAFRGTQE---- 108 (283)
Q Consensus 35 y~~~~a~~l~~~a~aaY~~~~~~~~~~~c~~~~~~~~~~--~~~~~~~d~~~~~~~~v~~~~~~~~ivVafRGT~~---- 108 (283)
-|+.....+.+|++.+|-+-+. .-.| .++.+.| .+.+.+.....+..|-|+.++.+..|+++.+||..
T Consensus 130 tDr~t~~sl~~MssNaY~~ip~-dgdw-----~nv~~~wn~T~pe~FGwdgDGlRghVF~nd~~~vv~~~~kgtSi~Gl~ 203 (425)
T COG5153 130 TDRVTLLSLIEMSSNAYHSIPL-DGDW-----RNVTEPWNETVPETFGWDGDGLRGHVFGNDGKIVVAFKGKGTSIMGLE 203 (425)
T ss_pred cchHHHHHHHHhhccceecCCC-CCcc-----cccCCCcccCCccccCcCCCCceeeeeccCCceEEEEEeccceEEeec
Confidence 4666777789999999976332 2334 2222222 22334555567889999988877777777777642
Q ss_pred ---CChHHHHhhc-cc----cccccCCCCCCCceEehh-----h----HHHHhccchHHHHHHHHHHHHHHcCCeEEEEe
Q 023358 109 ---HSIQNWIEDL-FW----KQLDINYPGMSDAMVHHG-----F----YSAYHNTTIRPAIINAVERAKDFYGDLNIMVT 171 (283)
Q Consensus 109 ---~s~~d~~~Dl-~~----~~~~~~~~~~~~~~vH~G-----f----~~~~~~~~~~~~i~~~l~~~~~~~~~~~i~vT 171 (283)
+|-+|-+.|- -+ ..+...+..+.+|.+.+- . .+.+. ......++.+..+++.||+.+||+|
T Consensus 204 g~gTs~kDk~nDnlLfScCcarvs~~wttvc~cy~~sy~c~~~ClE~eir~~d--ryySa~ldI~~~v~~~Ypda~iwlT 281 (425)
T COG5153 204 GGGTSRKDKLNDNLLFSCCCARVSYLWTTVCDCYVKSYICDKECLEEEIREFD--RYYSAALDILGAVRRIYPDARIWLT 281 (425)
T ss_pred cCCccccccchhhHHHHHHhhhhhhhhhhhcchhcccccccHHHHHHHHHhhc--chhHHHHHHHHHHHHhCCCceEEEe
Confidence 2345655551 11 111111111122211100 0 00111 2234566777777888999999999
Q ss_pred ccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCCCCHHHHHHHhccC--------CCEEEEEECCCccCc
Q 023358 172 GHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFASYYTQLV--------PNTFRVTNYHDIVPH 234 (283)
Q Consensus 172 GHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prvgn~~fa~~~~~~~--------~~~~riv~~~D~VP~ 234 (283)
|||||||+|+|++..+ .+.+++|.+|. +.--++.+.--. ..++++-|..|+|=+
T Consensus 282 GHSLGGa~AsLlG~~f-------glP~VaFesPG--d~~aa~rLhLp~ppglpd~~~~iwHfGhnaDpif~ 343 (425)
T COG5153 282 GHSLGGAIASLLGIRF-------GLPVVAFESPG--DAYAANRLHLPDPPGLPDNMEGIWHFGHNADPIFR 343 (425)
T ss_pred ccccchHHHHHhcccc-------CCceEEecCch--hhhhhhccCCCCCCCCCccccceEEeccCCCceEe
Confidence 9999999999999854 56789999994 332222222111 137888888888743
No 22
>COG3675 Predicted lipase [Lipid metabolism]
Probab=99.24 E-value=8.5e-13 Score=116.23 Aligned_cols=148 Identities=19% Similarity=0.249 Sum_probs=108.4
Q ss_pred EEEEEEECCCCeEEEEEcCCCcCChHHHHhhcccccccc---------------CCCCCCCceEehhhHHHHhccchHHH
Q 023358 87 QGFLGVAKDLNAIVIAFRGTQEHSIQNWIEDLFWKQLDI---------------NYPGMSDAMVHHGFYSAYHNTTIRPA 151 (283)
Q Consensus 87 ~~~v~~~~~~~~ivVafRGT~~~s~~d~~~Dl~~~~~~~---------------~~~~~~~~~vH~Gf~~~~~~~~~~~~ 151 (283)
+++++++.-.+.++++|||+. +.+||..|++..+... .+..+.++..|+++.+.-. ++...
T Consensus 83 S~~~a~~rls~~vi~vf~gs~--~Rqdw~~~fd~de~n~~~l~~g~lay~ie~g~~~~ldn~gm~~~~sr~~d--tlgmt 158 (332)
T COG3675 83 SIRVAWSRLSDEVIVVFKGSH--SRQDWLLNFDVDERNCRHLCVGELAYRIEAGFYHLLDNEGMHRQPSRNQD--TLGMT 158 (332)
T ss_pred hhhhHHhhcCCcEEEEEeccc--cccccchhcccchhhhhHHHHHHHHHHhhccceeeccccccccchhhhhh--hcCch
Confidence 467888888999999999987 6799999987543221 1223456668888887655 33334
Q ss_pred HHH-HHHHHHHHcCC-eEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCCCCHHHHHHHhccC-C--------
Q 023358 152 IIN-AVERAKDFYGD-LNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFASYYTQLV-P-------- 220 (283)
Q Consensus 152 i~~-~l~~~~~~~~~-~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prvgn~~fa~~~~~~~-~-------- 220 (283)
+.+ ..+.+.+..|. |++-+||||.|||++.+.+.++..+.+..+-.++||++|.++|..+++|+.+.+ .
T Consensus 159 v~~~q~~~lleeiP~~Yrig~tghS~g~aii~vrGtyfe~k~p~vdnlv~tf~~P~itd~r~~QyVh~gF~~~t~ri~S~ 238 (332)
T COG3675 159 VIEKQEQTLLEEIPQGYRIGITGHSSGGAIICVRGTYFERKYPRVDNLVVTFGQPAITDWRFPQYVHEGFAHKTYRICSD 238 (332)
T ss_pred HHHHHHHHHHHhcccceEEEEEeecCCccEEEEeccchhcccCCcccceeeccCCccccchhHHHHHhHHHHHHHHHhcc
Confidence 443 45566777785 999999999999999999986666666666677899999999999999977543 1
Q ss_pred ---------CEEEEEECCCccCcCCCC
Q 023358 221 ---------NTFRVTNYHDIVPHLPPY 238 (283)
Q Consensus 221 ---------~~~riv~~~D~VP~lP~~ 238 (283)
.-++++|..|..+.+|+.
T Consensus 239 l~~ei~~~k~pf~ycHsgg~~~avl~~ 265 (332)
T COG3675 239 LDIEIFMPKVPFLYCHSGGLLWAVLGR 265 (332)
T ss_pred chHhhcCcCCceEEEecCCcccccccc
Confidence 235566777777766654
No 23
>COG3675 Predicted lipase [Lipid metabolism]
Probab=98.78 E-value=2.3e-09 Score=94.72 Aligned_cols=138 Identities=21% Similarity=0.196 Sum_probs=90.9
Q ss_pred EEEEEECCCCeEEEEEcCCCcCChHHHHhhccc-cccccCCCCCCCceEehhhHHHHhccchHHHHHHHHHHHHHHcCCe
Q 023358 88 GFLGVAKDLNAIVIAFRGTQEHSIQNWIEDLFW-KQLDINYPGMSDAMVHHGFYSAYHNTTIRPAIINAVERAKDFYGDL 166 (283)
Q Consensus 88 ~~v~~~~~~~~ivVafRGT~~~s~~d~~~Dl~~-~~~~~~~~~~~~~~vH~Gf~~~~~~~~~~~~i~~~l~~~~~~~~~~ 166 (283)
||++ ++...-++++|||-..+-..|..++.+ ...|.-........||+||..-+. .+...++......+++
T Consensus 178 g~tg--hS~g~aii~vrGtyfe~k~p~vdnlv~tf~~P~itd~r~~QyVh~gF~~~t~------ri~S~l~~ei~~~k~p 249 (332)
T COG3675 178 GITG--HSSGGAIICVRGTYFERKYPRVDNLVVTFGQPAITDWRFPQYVHEGFAHKTY------RICSDLDIEIFMPKVP 249 (332)
T ss_pred EEEe--ecCCccEEEEeccchhcccCCcccceeeccCCccccchhHHHHHhHHHHHHH------HHhccchHhhcCcCCc
Confidence 4444 666788999999922155677777652 111100001112338999998765 3344444444445566
Q ss_pred EEEEeccChhHHHHHHHhHHhhhhcC--CcceEEEEecCCCCCCHHHHHHHhccCCCEEEEEECCCccCcCCCCCCCCCC
Q 023358 167 NIMVTGHSMGGAMAAFCGLDLTVNLG--IQNVQVMTFGQPRIGNAAFASYYTQLVPNTFRVTNYHDIVPHLPPYYSYFPQ 244 (283)
Q Consensus 167 ~i~vTGHSLGGalA~l~a~~l~~~~~--~~~v~~~tFg~Prvgn~~fa~~~~~~~~~~~riv~~~D~VP~lP~~~~~~~~ 244 (283)
.+++ ||+|++.|.+.- .+. ...++++++ ||||...|+++.. .+|++|..|.+|.+|... .
T Consensus 250 f~yc--Hsgg~~~avl~~-----~yhn~p~~lrLy~y--prVGl~~fae~il-----~YR~vNn~d~~p~~pt~g----m 311 (332)
T COG3675 250 FLYC--HSGGLLWAVLGR-----IYHNTPTWLRLYRY--PRVGLIRFAEYIL-----MYRYVNNKDFFPERPTEG----M 311 (332)
T ss_pred eEEE--ecCCcccccccc-----cccCCchhheeecc--ccccccchHHHHH-----HHhhcchhhhcccccccc----c
Confidence 6666 999999988762 122 456788888 9999999999943 479999999999999653 3
Q ss_pred CcceecC
Q 023358 245 KTYHHFP 251 (283)
Q Consensus 245 ~~y~H~g 251 (283)
.++.|++
T Consensus 312 ~t~VHV~ 318 (332)
T COG3675 312 STLVHVY 318 (332)
T ss_pred cceeEEE
Confidence 4677754
No 24
>KOG2088 consensus Predicted lipase/calmodulin-binding heat-shock protein [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=97.84 E-value=5.1e-06 Score=81.88 Aligned_cols=138 Identities=19% Similarity=0.194 Sum_probs=91.6
Q ss_pred EEEEECCCCeEEEEEcC-CCcCChHHHHhhccccc----cccCC--CCCCCceEehhhHHHHhccchHHHHHHHHH-HHH
Q 023358 89 FLGVAKDLNAIVIAFRG-TQEHSIQNWIEDLFWKQ----LDINY--PGMSDAMVHHGFYSAYHNTTIRPAIINAVE-RAK 160 (283)
Q Consensus 89 ~v~~~~~~~~ivVafRG-T~~~s~~d~~~Dl~~~~----~~~~~--~~~~~~~vH~Gf~~~~~~~~~~~~i~~~l~-~~~ 160 (283)
++..|+....++++.|| +. ++.+-.+|+.-.. +..++ ....++.+|.|...+.. ++.++-...++ +..
T Consensus 171 ~i~~dh~~~~v~~~ir~~~~--s~~e~~~~~~~~~~~~~~~~~~~~~~f~~~~~h~g~~~~a~--~~~~~~~~~~~~r~~ 246 (596)
T KOG2088|consen 171 VIGGDHVRLEVVLAIRGALN--SAYESDTDVTEAVAHASVLNDFGERKFDGGYVHNGLLKAAA--WILAEETATLRSRLW 246 (596)
T ss_pred EEecCcchHHHHHHHHhhhc--chhhhccccccchhhhhhhccchhhccccccccCcccchHH--HHhhccchhhhhhhh
Confidence 44567888899999999 55 6788777764110 11111 11256889999977665 44444444444 667
Q ss_pred HHcCCeEEEEeccChhHHHHHHHhHHhhhhc------CCcceEEEEecCCCCCCHHHHHHHhccCCCEEEEEECCCccC
Q 023358 161 DFYGDLNIMVTGHSMGGAMAAFCGLDLTVNL------GIQNVQVMTFGQPRIGNAAFASYYTQLVPNTFRVTNYHDIVP 233 (283)
Q Consensus 161 ~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~------~~~~v~~~tFg~Prvgn~~fa~~~~~~~~~~~riv~~~D~VP 233 (283)
..+|+++++++|||+||..+++.+..+..+. ......+++|++||......++-.... +.-+++..|.+|
T Consensus 247 ~~~p~~~~~~~ghslg~~~~~l~~~~~l~~~~~l~~~~~~~~~~f~~a~~rc~~~~~~Et~~~v---i~d~~~~s~~~~ 322 (596)
T KOG2088|consen 247 RLYPSYKLTGVGHSLGGLSASLLANCVLRNPAELLLIDKARNFCFVLAPPRCFSLRVAETPFDV---ITDYVKQSDVLP 322 (596)
T ss_pred hhcCCCceeEEecccccchhhhhhHHHhcCHHHHhhccccceEEEEeccccccchhhccCHHHH---HHhccccceeee
Confidence 7889999999999999999999997654441 234568999999997444433333222 235666677776
No 25
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=97.35 E-value=0.00017 Score=60.90 Aligned_cols=87 Identities=17% Similarity=0.168 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHH--hhhhcCCcceEEEEecCCCCCCHHHHHHHhccCCCEEEEE
Q 023358 149 RPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLD--LTVNLGIQNVQVMTFGQPRIGNAAFASYYTQLVPNTFRVT 226 (283)
Q Consensus 149 ~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~--l~~~~~~~~v~~~tFg~Prvgn~~fa~~~~~~~~~~~riv 226 (283)
...+...|++..++.|+.+|+++|+|+||.++.-+... +......+...++.||.|+-.... .........++..+.
T Consensus 64 ~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~~~~-~~~~~~~~~~~~~~C 142 (179)
T PF01083_consen 64 VANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRGAGQ-PGIPGDYSDRVRSYC 142 (179)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTBTTT-TTBTCSCGGGEEEE-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcccCCc-cccCcccccceeEEc
Confidence 34566777777788999999999999999999888766 222212233468999999873211 011111123577888
Q ss_pred ECCCccCcCC
Q 023358 227 NYHDIVPHLP 236 (283)
Q Consensus 227 ~~~D~VP~lP 236 (283)
+..|+|-.-+
T Consensus 143 ~~gD~vC~~~ 152 (179)
T PF01083_consen 143 NPGDPVCDAS 152 (179)
T ss_dssp BTT-GGGGTS
T ss_pred CCCCcccCCC
Confidence 8999988643
No 26
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=97.28 E-value=0.0006 Score=59.73 Aligned_cols=57 Identities=23% Similarity=0.372 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHc-----CCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCCCCH
Q 023358 152 IINAVERAKDFY-----GDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNA 209 (283)
Q Consensus 152 i~~~l~~~~~~~-----~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prvgn~ 209 (283)
+.+.++.+.+.+ +..+|++.||||||-+|..+....... +...-.++|+|+|--|.+
T Consensus 66 ~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~-~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 66 LAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYD-PDSVKTIITLGTPHRGSP 127 (225)
T ss_pred HHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccc-cccEEEEEEEcCCCCCcc
Confidence 334444444444 678999999999999888776542211 222336999999988765
No 27
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.23 E-value=0.0024 Score=55.49 Aligned_cols=58 Identities=21% Similarity=0.301 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHcCC--eEEEEeccChhHHHHHHHhHHhhhhcC--C------cceEEEEecCCCCCC
Q 023358 151 AIINAVERAKDFYGD--LNIMVTGHSMGGAMAAFCGLDLTVNLG--I------QNVQVMTFGQPRIGN 208 (283)
Q Consensus 151 ~i~~~l~~~~~~~~~--~~i~vTGHSLGGalA~l~a~~l~~~~~--~------~~v~~~tFg~Prvgn 208 (283)
.+.+.|.+..+..+. .+|.+.||||||-++-.+-..+..... . .....+|||.|=.|-
T Consensus 61 rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G~ 128 (217)
T PF05057_consen 61 RLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLGS 128 (217)
T ss_pred HHHHHHHHhccccccccccceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCCC
Confidence 444444444444443 589999999999999877766655421 1 223567889998874
No 28
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.20 E-value=0.0016 Score=54.86 Aligned_cols=84 Identities=18% Similarity=0.294 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHc-CCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCCCCHHHHHHHhccCCCEEEEEE
Q 023358 149 RPAIINAVERAKDFY-GDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFASYYTQLVPNTFRVTN 227 (283)
Q Consensus 149 ~~~i~~~l~~~~~~~-~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prvgn~~fa~~~~~~~~~~~riv~ 227 (283)
...+...+..+...+ |+.++.+.|||.|..++-+++.. .+..-=.++.+|+|.++-..-. .+.-...++|....
T Consensus 91 a~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~----~~~~vddvv~~GSPG~g~~~a~-~l~~~~~~v~a~~a 165 (177)
T PF06259_consen 91 APRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQ----GGLRVDDVVLVGSPGMGVDSAS-DLGVPPGHVYAMTA 165 (177)
T ss_pred HHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhh----CCCCcccEEEECCCCCCCCCHH-HcCCCCCcEEEeeC
Confidence 345666666666666 78899999999999999888765 1122225889999999754422 23322357899999
Q ss_pred CCCccCcCCC
Q 023358 228 YHDIVPHLPP 237 (283)
Q Consensus 228 ~~D~VP~lP~ 237 (283)
.+|+|..+|.
T Consensus 166 ~~D~I~~v~~ 175 (177)
T PF06259_consen 166 PGDPIAYVPR 175 (177)
T ss_pred CCCCcccCCC
Confidence 9999999985
No 29
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=97.04 E-value=0.0017 Score=59.29 Aligned_cols=68 Identities=19% Similarity=0.303 Sum_probs=50.8
Q ss_pred EehhhHHHHhccchHHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCCCCH
Q 023358 135 VHHGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNA 209 (283)
Q Consensus 135 vH~Gf~~~~~~~~~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prvgn~ 209 (283)
-.+|..+.|. ...+.+...++.....+++.++++.||||||.+|..++.... ..+.-+...+|..+-.
T Consensus 78 ~~rg~~~~f~--~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~-----~~i~~~vLssP~~~l~ 145 (298)
T COG2267 78 GQRGHVDSFA--DYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYP-----PRIDGLVLSSPALGLG 145 (298)
T ss_pred CCcCCchhHH--HHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCC-----ccccEEEEECccccCC
Confidence 3556666655 445566666666666678999999999999999999887643 5677788888887544
No 30
>PHA02857 monoglyceride lipase; Provisional
Probab=97.00 E-value=0.004 Score=55.21 Aligned_cols=37 Identities=22% Similarity=0.473 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHH
Q 023358 150 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 150 ~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~ 186 (283)
+++.+.+..+.+.++..++.+.|||+||++|..++..
T Consensus 81 ~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~ 117 (276)
T PHA02857 81 RDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYK 117 (276)
T ss_pred HHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHh
Confidence 4556666555555677789999999999999888864
No 31
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=96.88 E-value=0.013 Score=51.59 Aligned_cols=138 Identities=16% Similarity=0.192 Sum_probs=86.7
Q ss_pred CCCeEEEEEcCCCcCChHHHHhh-------cccc--ccccCCCCCCCceEehhhHHHHhc-cchHHHHHHHHHHHHHHcC
Q 023358 95 DLNAIVIAFRGTQEHSIQNWIED-------LFWK--QLDINYPGMSDAMVHHGFYSAYHN-TTIRPAIINAVERAKDFYG 164 (283)
Q Consensus 95 ~~~~ivVafRGT~~~s~~d~~~D-------l~~~--~~~~~~~~~~~~~vH~Gf~~~~~~-~~~~~~i~~~l~~~~~~~~ 164 (283)
+.++++|=+-|=+. ++.+.+.. +.+. .+.+.||. .+.+ .+|...-.. ..-.+.+.+.|+.+.+..+
T Consensus 16 ~~~~vlvfVHGyn~-~f~~a~~r~aql~~~~~~~~~~i~FsWPS--~g~~-~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~ 91 (233)
T PF05990_consen 16 PDKEVLVFVHGYNN-SFEDALRRAAQLAHDLGFPGVVILFSWPS--DGSL-LGYFYDRESARFSGPALARFLRDLARAPG 91 (233)
T ss_pred CCCeEEEEEeCCCC-CHHHHHHHHHHHHHHhCCCceEEEEEcCC--CCCh-hhhhhhhhhHHHHHHHHHHHHHHHHhccC
Confidence 45778888888874 55555433 3222 22344553 3332 223321111 0123456666666665557
Q ss_pred CeEEEEeccChhHHHHHHHhHHhhhhcC----CcceEEEEecCCCCCCHHHHHHHhcc---CCCEEEEEECCCccCcCC
Q 023358 165 DLNIMVTGHSMGGAMAAFCGLDLTVNLG----IQNVQVMTFGQPRIGNAAFASYYTQL---VPNTFRVTNYHDIVPHLP 236 (283)
Q Consensus 165 ~~~i~vTGHSLGGalA~l~a~~l~~~~~----~~~v~~~tFg~Prvgn~~fa~~~~~~---~~~~~riv~~~D~VP~lP 236 (283)
..+|.+.+||||+-+..-+-..+..... ...+.-+.+.+|=+....|....... ..+++-+.+.+|.+=.+.
T Consensus 92 ~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~f~~~~~~~~~~~~~itvy~s~~D~AL~~S 170 (233)
T PF05990_consen 92 IKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDVFRSQLPDLGSSARRITVYYSRNDRALKAS 170 (233)
T ss_pred CceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHHHHHHHHHHhhcCCCEEEEEcCCchHHHHH
Confidence 8899999999999887766555554422 13567788999999999898877654 356777888999765554
No 32
>PRK10749 lysophospholipase L2; Provisional
Probab=96.69 E-value=0.014 Score=53.71 Aligned_cols=54 Identities=13% Similarity=0.041 Sum_probs=35.3
Q ss_pred hHHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCC
Q 023358 148 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI 206 (283)
Q Consensus 148 ~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prv 206 (283)
+.+.+...++.+...++..++++.||||||.+|..++... ...++.+...+|..
T Consensus 113 ~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~-----p~~v~~lvl~~p~~ 166 (330)
T PRK10749 113 YVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRH-----PGVFDAIALCAPMF 166 (330)
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhC-----CCCcceEEEECchh
Confidence 3445666665555555667899999999999998877642 23344444555654
No 33
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.62 E-value=0.0043 Score=55.94 Aligned_cols=78 Identities=17% Similarity=0.180 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHH--cCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceE-EEEe--cCCCCCCHHHHHHHhccCCCEE
Q 023358 149 RPAIINAVERAKDF--YGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQ-VMTF--GQPRIGNAAFASYYTQLVPNTF 223 (283)
Q Consensus 149 ~~~i~~~l~~~~~~--~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~-~~tF--g~Prvgn~~fa~~~~~~~~~~~ 223 (283)
.+++.+.++.+.+. .+..++++.||||||.+|..++..+.. ++. ++.. +.|...+......++..-..+.
T Consensus 93 ~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~-----~v~~iv~LDPa~p~f~~~~~~~rl~~~dA~~V 167 (275)
T cd00707 93 GAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNG-----KLGRITGLDPAGPLFSGADPEDRLDPSDAQFV 167 (275)
T ss_pred HHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcC-----ccceeEEecCCcccccCCCcccccCCCCCCeE
Confidence 34555666666554 234689999999999999999876532 333 3333 2333322222333333333556
Q ss_pred EEEECCCc
Q 023358 224 RVTNYHDI 231 (283)
Q Consensus 224 riv~~~D~ 231 (283)
.++|.+--
T Consensus 168 ~vihT~~~ 175 (275)
T cd00707 168 DVIHTDGG 175 (275)
T ss_pred EEEEeCCC
Confidence 66666543
No 34
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=96.49 E-value=0.0054 Score=58.99 Aligned_cols=62 Identities=16% Similarity=0.171 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCCCCHHH
Q 023358 150 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAF 211 (283)
Q Consensus 150 ~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prvgn~~f 211 (283)
+.+.+.++++.+.++..++.+.||||||.+|...+..........--++++.|+|=-|....
T Consensus 146 ~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~Gs~~~ 207 (440)
T PLN02733 146 DGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQGAPGF 207 (440)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCCCCchh
Confidence 45666666777777888999999999999998766542221111122578889887777543
No 35
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=96.46 E-value=0.016 Score=53.63 Aligned_cols=26 Identities=31% Similarity=0.238 Sum_probs=21.6
Q ss_pred HcC-CeEEEEeccChhHHHHHHHhHHh
Q 023358 162 FYG-DLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 162 ~~~-~~~i~vTGHSLGGalA~l~a~~l 187 (283)
.+| +.++++.||||||.++..++..+
T Consensus 137 ~~~~~~p~~l~GhSmGg~i~~~~~~~~ 163 (332)
T TIGR01607 137 TKENRLPMYIIGLSMGGNIALRLLELL 163 (332)
T ss_pred cccCCCceeEeeccCccHHHHHHHHHh
Confidence 356 78899999999999998877654
No 36
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=96.37 E-value=0.034 Score=52.80 Aligned_cols=55 Identities=15% Similarity=0.161 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCC
Q 023358 149 RPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI 206 (283)
Q Consensus 149 ~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prv 206 (283)
.+++...++.+..++++.++++.|||+||.+|..++.+ .. ....+..+...+|..
T Consensus 191 ~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~~--p~-~~~~v~glVL~sP~l 245 (395)
T PLN02652 191 VEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAASY--PS-IEDKLEGIVLTSPAL 245 (395)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHhc--cC-cccccceEEEECccc
Confidence 45666677777767777789999999999999876531 00 012455556666754
No 37
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=96.28 E-value=0.025 Score=52.59 Aligned_cols=72 Identities=21% Similarity=0.357 Sum_probs=53.3
Q ss_pred CCeEEEEeccChhHHHHHHHhHHhhhhcCCcce-EEEEecCCCCCCHH-HHHHHhccCCCEEEEEECCCccCcC
Q 023358 164 GDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQPRIGNAA-FASYYTQLVPNTFRVTNYHDIVPHL 235 (283)
Q Consensus 164 ~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v-~~~tFg~Prvgn~~-fa~~~~~~~~~~~riv~~~D~VP~l 235 (283)
++.+|.+.|||||+-+-..+-.+|.+.....-| .++-+|+|...+.. |.+.-.-..+++.++..++|.|=..
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~~~W~~~r~vVsGr~vN~YS~~D~vL~~ 291 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDPEEWRKIRSVVSGRLVNVYSENDWVLGF 291 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCHHHHHHHHHHccCeEEEEecCcHHHHHH
Confidence 466899999999999998888888876333333 68999999998754 3333333446778888899987444
No 38
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=96.28 E-value=0.0096 Score=53.16 Aligned_cols=56 Identities=18% Similarity=0.227 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcce-EEEEecCCCC
Q 023358 151 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQPRI 206 (283)
Q Consensus 151 ~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v-~~~tFg~Prv 206 (283)
-+...+..+.++|.-.++-++|||+||-.+.............+.+ ++++.|+|==
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 3445566677888888999999999998887666655444333344 7899998844
No 39
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=96.27 E-value=0.014 Score=50.25 Aligned_cols=58 Identities=17% Similarity=0.177 Sum_probs=41.5
Q ss_pred hHHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCC
Q 023358 148 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI 206 (283)
Q Consensus 148 ~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prv 206 (283)
+.+-+...++.+++..|..++++.|||+||.+|.-+|..|... +...-.++.+.+|..
T Consensus 48 i~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~-G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 48 IEELASRYAEAIRARQPEGPYVLAGWSFGGILAFEMARQLEEA-GEEVSRLILIDSPPP 105 (229)
T ss_dssp HHHHHHHHHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHHHHT-T-SESEEEEESCSST
T ss_pred HHHHHHHHHHHhhhhCCCCCeeehccCccHHHHHHHHHHHHHh-hhccCceEEecCCCC
Confidence 3344445556666667767999999999999999999988776 333336777886544
No 40
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.24 E-value=0.0035 Score=56.11 Aligned_cols=37 Identities=24% Similarity=0.348 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhH
Q 023358 148 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGL 185 (283)
Q Consensus 148 ~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~ 185 (283)
+.+++...++++-... ..+|+++|||||||+|...|.
T Consensus 129 ~~KD~~~~i~~~fge~-~~~iilVGHSmGGaIav~~a~ 165 (343)
T KOG2564|consen 129 MSKDFGAVIKELFGEL-PPQIILVGHSMGGAIAVHTAA 165 (343)
T ss_pred HHHHHHHHHHHHhccC-CCceEEEeccccchhhhhhhh
Confidence 4455555555543222 457999999999999976654
No 41
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.17 E-value=0.055 Score=50.24 Aligned_cols=142 Identities=15% Similarity=0.135 Sum_probs=90.5
Q ss_pred CCCeEEEEEcCCCcCChHHHH-------hhccc--cccccCCCCCCCceEehhhHHHHhccchHHHHHHHHHHHHHHcCC
Q 023358 95 DLNAIVIAFRGTQEHSIQNWI-------EDLFW--KQLDINYPGMSDAMVHHGFYSAYHNTTIRPAIINAVERAKDFYGD 165 (283)
Q Consensus 95 ~~~~ivVafRGT~~~s~~d~~-------~Dl~~--~~~~~~~~~~~~~~vH~Gf~~~~~~~~~~~~i~~~l~~~~~~~~~ 165 (283)
..++++|-..|-+. ++.|-. .|... ..+-++|| +++++-.--++.-....-++.+...|+.+.++.+.
T Consensus 114 ~~k~vlvFvHGfNn-tf~dav~R~aqI~~d~g~~~~pVvFSWP--S~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~ 190 (377)
T COG4782 114 SAKTVLVFVHGFNN-TFEDAVYRTAQIVHDSGNDGVPVVFSWP--SRGSLLGYNYDRESTNYSRPALERLLRYLATDKPV 190 (377)
T ss_pred CCCeEEEEEcccCC-chhHHHHHHHHHHhhcCCCcceEEEEcC--CCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCC
Confidence 56899999999985 454433 23222 23334555 34443222222111112356777788888777778
Q ss_pred eEEEEeccChhHHHHHHHhHHhhhhcC---CcceEEEEecCCCCCCHHHHHHHhccC---CCEEEEEECCCccCcCCCCC
Q 023358 166 LNIMVTGHSMGGAMAAFCGLDLTVNLG---IQNVQVMTFGQPRIGNAAFASYYTQLV---PNTFRVTNYHDIVPHLPPYY 239 (283)
Q Consensus 166 ~~i~vTGHSLGGalA~l~a~~l~~~~~---~~~v~~~tFg~Prvgn~~fa~~~~~~~---~~~~riv~~~D~VP~lP~~~ 239 (283)
.+|.+..||||.-+..-+--.|+..-. ..+++=+.+++|.++-..|......+. +.+.-++...|..+.++..+
T Consensus 191 ~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DVF~~Q~~~mg~~~~~ft~~~s~dDral~~s~~i 270 (377)
T COG4782 191 KRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDVFSSQIAAMGKPDPPFTLFVSRDDRALALSRRI 270 (377)
T ss_pred ceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhhHHHHHHHhcCCCCCeeEEecccchhhcccccc
Confidence 999999999999877655544443311 234667899999998888876665543 35666778888888887653
No 42
>PLN02511 hydrolase
Probab=96.14 E-value=0.024 Score=53.60 Aligned_cols=55 Identities=15% Similarity=0.175 Sum_probs=38.2
Q ss_pred hHHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCC
Q 023358 148 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQP 204 (283)
Q Consensus 148 ~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~P 204 (283)
..+++...++.+..++|+.++++.||||||.++...+.+.... ..-..++..++|
T Consensus 155 ~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~--~~v~~~v~is~p 209 (388)
T PLN02511 155 FTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGEN--CPLSGAVSLCNP 209 (388)
T ss_pred chHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCC--CCceEEEEECCC
Confidence 3457777777777888888999999999999987776543211 012345666655
No 43
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.12 E-value=0.021 Score=50.26 Aligned_cols=102 Identities=15% Similarity=0.170 Sum_probs=60.5
Q ss_pred CeEEEEEcCCCcCChHHHHhhcc--ccccccCCCCCCCceEehhhHHHHhccchHHHHHHHHHHHHH-HcCCeEEEEecc
Q 023358 97 NAIVIAFRGTQEHSIQNWIEDLF--WKQLDINYPGMSDAMVHHGFYSAYHNTTIRPAIINAVERAKD-FYGDLNIMVTGH 173 (283)
Q Consensus 97 ~~ivVafRGT~~~s~~d~~~Dl~--~~~~~~~~~~~~~~~vH~Gf~~~~~~~~~~~~i~~~l~~~~~-~~~~~~i~vTGH 173 (283)
+-+..-+.|-....+.-|...+. +....+.+|+. +.+.+..+..... .+.+.|..... .+++.++-+-||
T Consensus 9 ~L~cfP~AGGsa~~fr~W~~~lp~~iel~avqlPGR-~~r~~ep~~~di~------~Lad~la~el~~~~~d~P~alfGH 81 (244)
T COG3208 9 RLFCFPHAGGSASLFRSWSRRLPADIELLAVQLPGR-GDRFGEPLLTDIE------SLADELANELLPPLLDAPFALFGH 81 (244)
T ss_pred eEEEecCCCCCHHHHHHHHhhCCchhheeeecCCCc-ccccCCcccccHH------HHHHHHHHHhccccCCCCeeeccc
Confidence 34455556665445667777653 34445567763 2334444444333 33333333333 466889999999
Q ss_pred ChhHHHHHHHhHHhhhhcCCcceEEEEecCCCC
Q 023358 174 SMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI 206 (283)
Q Consensus 174 SLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prv 206 (283)
||||.+|--.|..+.... .....++.-|++..
T Consensus 82 SmGa~lAfEvArrl~~~g-~~p~~lfisg~~aP 113 (244)
T COG3208 82 SMGAMLAFEVARRLERAG-LPPRALFISGCRAP 113 (244)
T ss_pred chhHHHHHHHHHHHHHcC-CCcceEEEecCCCC
Confidence 999999999998886653 23445555565443
No 44
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=96.10 E-value=0.016 Score=50.06 Aligned_cols=33 Identities=21% Similarity=0.333 Sum_probs=25.0
Q ss_pred HHHHHHHHcCCeEEEEeccChhHHHHHHHhHHh
Q 023358 155 AVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 155 ~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l 187 (283)
.+..+.+.....++++.||||||.+|..++...
T Consensus 55 ~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~~ 87 (242)
T PRK11126 55 LLSQTLQSYNILPYWLVGYSLGGRIAMYYACQG 87 (242)
T ss_pred HHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhC
Confidence 333444444567999999999999999998753
No 45
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=96.07 E-value=0.08 Score=45.94 Aligned_cols=31 Identities=29% Similarity=0.438 Sum_probs=22.9
Q ss_pred HHHHHHHcCCeEEEEeccChhHHHHHHHhHH
Q 023358 156 VERAKDFYGDLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 156 l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~ 186 (283)
+..+.+.....++++.|||+||.+|..++..
T Consensus 86 ~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~ 116 (288)
T TIGR01250 86 LEEVREKLGLDKFYLLGHSWGGMLAQEYALK 116 (288)
T ss_pred HHHHHHHcCCCcEEEEEeehHHHHHHHHHHh
Confidence 3333444444569999999999999998875
No 46
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=95.98 E-value=0.018 Score=48.71 Aligned_cols=50 Identities=24% Similarity=0.411 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceE-EEEecCC
Q 023358 150 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQ-VMTFGQP 204 (283)
Q Consensus 150 ~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~-~~tFg~P 204 (283)
..+.+.+..+++..+..++.+.|||+||.++..++.... ..++ ++..++|
T Consensus 28 ~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p-----~~v~~lvl~~~~ 78 (230)
T PF00561_consen 28 DDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYP-----ERVKKLVLISPP 78 (230)
T ss_dssp HHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSG-----GGEEEEEEESES
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCc-----hhhcCcEEEeee
Confidence 345555566666667667999999999999988887532 2454 5555554
No 47
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=95.95 E-value=0.035 Score=54.67 Aligned_cols=56 Identities=16% Similarity=0.213 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcce-EEEEecCCC
Q 023358 150 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQPR 205 (283)
Q Consensus 150 ~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v-~~~tFg~Pr 205 (283)
+.+.+.+..+.+..+..++.++|||+||.+++++...+........+ .++.+++|-
T Consensus 246 ~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~ 302 (532)
T TIGR01838 246 DGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLL 302 (532)
T ss_pred HHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCc
Confidence 45666666666666778899999999999876644433333212334 466677663
No 48
>PRK10985 putative hydrolase; Provisional
Probab=95.94 E-value=0.016 Score=53.13 Aligned_cols=53 Identities=15% Similarity=0.114 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcce-EEEEecCCC
Q 023358 150 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQPR 205 (283)
Q Consensus 150 ~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v-~~~tFg~Pr 205 (283)
+++...++.+.++++..++++.||||||.++...+.... +...+ .+++.++|-
T Consensus 115 ~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~---~~~~~~~~v~i~~p~ 168 (324)
T PRK10985 115 EDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEG---DDLPLDAAVIVSAPL 168 (324)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhC---CCCCccEEEEEcCCC
Confidence 455556666666677778999999999997766554321 11223 578888874
No 49
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=95.91 E-value=0.069 Score=49.41 Aligned_cols=38 Identities=29% Similarity=0.392 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHH--cCCeEEEEeccChhHHHHHHHhHH
Q 023358 149 RPAIINAVERAKDF--YGDLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 149 ~~~i~~~l~~~~~~--~~~~~i~vTGHSLGGalA~l~a~~ 186 (283)
.+++.+.++.+... +++.++++.||||||++|..++..
T Consensus 143 ~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~ 182 (349)
T PLN02385 143 VDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLK 182 (349)
T ss_pred HHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHh
Confidence 34555555554332 345689999999999999887764
No 50
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=95.88 E-value=0.021 Score=51.80 Aligned_cols=39 Identities=26% Similarity=0.405 Sum_probs=30.2
Q ss_pred hHHHHHHHHHH--HHHHcCCeEEEEeccChhHHHHHHHhHH
Q 023358 148 IRPAIINAVER--AKDFYGDLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 148 ~~~~i~~~l~~--~~~~~~~~~i~vTGHSLGGalA~l~a~~ 186 (283)
+.+.+.+.+.. ...++++....+-|||||||+|.+++..
T Consensus 109 ~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k 149 (313)
T KOG1455|consen 109 VVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALK 149 (313)
T ss_pred HHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhh
Confidence 34456666654 3456789999999999999999999874
No 51
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=95.85 E-value=0.019 Score=52.54 Aligned_cols=38 Identities=24% Similarity=0.350 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHH--cCCeEEEEeccChhHHHHHHHhHH
Q 023358 149 RPAIINAVERAKDF--YGDLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 149 ~~~i~~~l~~~~~~--~~~~~i~vTGHSLGGalA~l~a~~ 186 (283)
.+.+...++.+... +++.++++.||||||++|..++..
T Consensus 115 ~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~ 154 (330)
T PLN02298 115 VEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLA 154 (330)
T ss_pred HHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhc
Confidence 34555556555442 345689999999999999887763
No 52
>PRK11071 esterase YqiA; Provisional
Probab=95.59 E-value=0.019 Score=48.78 Aligned_cols=34 Identities=21% Similarity=0.195 Sum_probs=25.5
Q ss_pred HHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHh
Q 023358 154 NAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 154 ~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l 187 (283)
+.+..+.+..+..++.+.||||||.+|..++...
T Consensus 49 ~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 82 (190)
T PRK11071 49 ELLESLVLEHGGDPLGLVGSSLGGYYATWLSQCF 82 (190)
T ss_pred HHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHc
Confidence 3344444455566899999999999999888753
No 53
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=95.57 E-value=0.085 Score=50.75 Aligned_cols=38 Identities=21% Similarity=0.232 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHH--cCCeEEEEeccChhHHHHHHHhHHh
Q 023358 150 PAIINAVERAKDF--YGDLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 150 ~~i~~~l~~~~~~--~~~~~i~vTGHSLGGalA~l~a~~l 187 (283)
..+.+.++.+.+. .+-.++.+.||||||.+|..++...
T Consensus 101 ~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~ 140 (442)
T TIGR03230 101 KDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLT 140 (442)
T ss_pred HHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhC
Confidence 3444455544332 2456899999999999999988643
No 54
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=95.55 E-value=0.02 Score=48.54 Aligned_cols=32 Identities=25% Similarity=0.214 Sum_probs=23.3
Q ss_pred HHHHHHHHcCCeEEEEeccChhHHHHHHHhHH
Q 023358 155 AVERAKDFYGDLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 155 ~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~ 186 (283)
.+..+.+..+..++.+.|||+||.+|..++..
T Consensus 68 ~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 68 DVLALLDHLGIERAVFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred HHHHHHHHhCCCceEEEEeCchHHHHHHHHHH
Confidence 33344444445689999999999999987764
No 55
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=95.54 E-value=0.03 Score=53.09 Aligned_cols=66 Identities=17% Similarity=0.207 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhh-cCCcce-EEEEecCCCCCCHHHHHHH
Q 023358 149 RPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVN-LGIQNV-QVMTFGQPRIGNAAFASYY 215 (283)
Q Consensus 149 ~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~-~~~~~v-~~~tFg~Prvgn~~fa~~~ 215 (283)
..++.+.|+++.+.. +.+|++.||||||-++..+-..+... +....| ..++.|+|-.|.......+
T Consensus 103 ~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs~~a~~~~ 170 (389)
T PF02450_consen 103 FTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGGSPKALRAL 170 (389)
T ss_pred HHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCCChHHHHHH
Confidence 345566666666665 88999999999999987765554322 112234 6899999988876544333
No 56
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=95.53 E-value=0.03 Score=46.42 Aligned_cols=46 Identities=24% Similarity=0.393 Sum_probs=30.1
Q ss_pred HHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceE-EEEecCCC
Q 023358 155 AVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQ-VMTFGQPR 205 (283)
Q Consensus 155 ~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~-~~tFg~Pr 205 (283)
.+.++.++....++++.|||+||.+|..++... ...+. ++..++|.
T Consensus 55 ~l~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~ 101 (228)
T PF12697_consen 55 DLAELLDALGIKKVILVGHSMGGMIALRLAARY-----PDRVKGLVLLSPPP 101 (228)
T ss_dssp HHHHHHHHTTTSSEEEEEETHHHHHHHHHHHHS-----GGGEEEEEEESESS
T ss_pred hhhhccccccccccccccccccccccccccccc-----ccccccceeecccc
Confidence 334444444546899999999999999888653 22454 45555444
No 57
>PLN02965 Probable pheophorbidase
Probab=95.51 E-value=0.029 Score=49.30 Aligned_cols=31 Identities=16% Similarity=0.169 Sum_probs=23.0
Q ss_pred HHHHHHHcCC-eEEEEeccChhHHHHHHHhHH
Q 023358 156 VERAKDFYGD-LNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 156 l~~~~~~~~~-~~i~vTGHSLGGalA~l~a~~ 186 (283)
+..+.+..+. .++++.||||||.+|..++..
T Consensus 61 l~~~l~~l~~~~~~~lvGhSmGG~ia~~~a~~ 92 (255)
T PLN02965 61 LFALLSDLPPDHKVILVGHSIGGGSVTEALCK 92 (255)
T ss_pred HHHHHHhcCCCCCEEEEecCcchHHHHHHHHh
Confidence 3344444333 589999999999999988874
No 58
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=95.44 E-value=0.025 Score=47.67 Aligned_cols=32 Identities=28% Similarity=0.429 Sum_probs=24.8
Q ss_pred HHHHHHHcCCeEEEEeccChhHHHHHHHhHHh
Q 023358 156 VERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 156 l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l 187 (283)
+..+.+..+..++.+.|||+||.+|..++...
T Consensus 60 ~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~ 91 (251)
T TIGR03695 60 LATLLDQLGIEPFFLVGYSMGGRIALYYALQY 91 (251)
T ss_pred HHHHHHHcCCCeEEEEEeccHHHHHHHHHHhC
Confidence 44444555567899999999999999988753
No 59
>PRK13604 luxD acyl transferase; Provisional
Probab=95.36 E-value=0.029 Score=51.36 Aligned_cols=50 Identities=8% Similarity=0.010 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCCC
Q 023358 150 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIG 207 (283)
Q Consensus 150 ~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prvg 207 (283)
.++...++-++++. ..+|.+.||||||++|.++|.+ .++..+...+|-..
T Consensus 93 ~Dl~aaid~lk~~~-~~~I~LiG~SmGgava~~~A~~-------~~v~~lI~~sp~~~ 142 (307)
T PRK13604 93 NSLLTVVDWLNTRG-INNLGLIAASLSARIAYEVINE-------IDLSFLITAVGVVN 142 (307)
T ss_pred HHHHHHHHHHHhcC-CCceEEEEECHHHHHHHHHhcC-------CCCCEEEEcCCccc
Confidence 45555555554443 4589999999999999777642 23666777777553
No 60
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=95.31 E-value=0.068 Score=45.59 Aligned_cols=66 Identities=23% Similarity=0.244 Sum_probs=42.9
Q ss_pred eEEEEEcCCCcCChHHHHhhccccccccCCCCCCCceEehhhHHHHhccchHHHHHHHHHHHHHHcC--CeEEEEeccCh
Q 023358 98 AIVIAFRGTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNTTIRPAIINAVERAKDFYG--DLNIMVTGHSM 175 (283)
Q Consensus 98 ~ivVafRGT~~~s~~d~~~Dl~~~~~~~~~~~~~~~~vH~Gf~~~~~~~~~~~~i~~~l~~~~~~~~--~~~i~vTGHSL 175 (283)
.+++-+||+.. .-.+|........ |- ...+++.+.++.+.+++. ..+|.++|||.
T Consensus 17 v~~~~~rGs~g-~g~~~~~~~~~~~---------------~~-------~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~ 73 (213)
T PF00326_consen 17 VLVPNYRGSGG-YGKDFHEAGRGDW---------------GQ-------ADVDDVVAAIEYLIKQYYIDPDRIGIMGHSY 73 (213)
T ss_dssp EEEEE-TTSSS-SHHHHHHTTTTGT---------------TH-------HHHHHHHHHHHHHHHTTSEEEEEEEEEEETH
T ss_pred EEEEcCCCCCc-cchhHHHhhhccc---------------cc-------cchhhHHHHHHHHhccccccceeEEEEcccc
Confidence 46778899874 3456665431100 00 124466777777766642 57899999999
Q ss_pred hHHHHHHHhHH
Q 023358 176 GGAMAAFCGLD 186 (283)
Q Consensus 176 GGalA~l~a~~ 186 (283)
||.+|.+++..
T Consensus 74 GG~~a~~~~~~ 84 (213)
T PF00326_consen 74 GGYLALLAATQ 84 (213)
T ss_dssp HHHHHHHHHHH
T ss_pred cccccchhhcc
Confidence 99999998873
No 61
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=95.31 E-value=0.057 Score=48.51 Aligned_cols=57 Identities=16% Similarity=0.255 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceE-EEEecCCCC-CCHHHHH
Q 023358 150 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQ-VMTFGQPRI-GNAAFAS 213 (283)
Q Consensus 150 ~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~-~~tFg~Prv-gn~~fa~ 213 (283)
+++...++.+.+. +..++++.||||||.+|..++... ...+. ++.. +|-+ |...+.+
T Consensus 84 ~Dv~~ai~~L~~~-~~~~v~LvG~SmGG~vAl~~A~~~-----p~~v~~lVL~-~P~~~g~~~l~~ 142 (266)
T TIGR03101 84 EDVAAAYRWLIEQ-GHPPVTLWGLRLGALLALDAANPL-----AAKCNRLVLW-QPVVSGKQQLQQ 142 (266)
T ss_pred HHHHHHHHHHHhc-CCCCEEEEEECHHHHHHHHHHHhC-----ccccceEEEe-ccccchHHHHHH
Confidence 4455544444433 456899999999999999877542 22444 5544 4545 4444433
No 62
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=95.24 E-value=0.041 Score=49.25 Aligned_cols=26 Identities=19% Similarity=0.141 Sum_probs=21.2
Q ss_pred HcCCeEEEEeccChhHHHHHHHhHHh
Q 023358 162 FYGDLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 162 ~~~~~~i~vTGHSLGGalA~l~a~~l 187 (283)
.....++++.|||+||.+|..++...
T Consensus 98 ~l~~~~~~lvGhS~Gg~va~~~a~~~ 123 (294)
T PLN02824 98 DVVGDPAFVICNSVGGVVGLQAAVDA 123 (294)
T ss_pred HhcCCCeEEEEeCHHHHHHHHHHHhC
Confidence 33456899999999999999988753
No 63
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=95.20 E-value=0.037 Score=51.34 Aligned_cols=35 Identities=17% Similarity=0.053 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHH
Q 023358 152 IINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 152 i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~ 186 (283)
+...++.+.+..+..++.+.|||+||.++..++..
T Consensus 122 ~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~ 156 (350)
T TIGR01836 122 IDKCVDYICRTSKLDQISLLGICQGGTFSLCYAAL 156 (350)
T ss_pred HHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHh
Confidence 55556666666777899999999999999887654
No 64
>KOG2088 consensus Predicted lipase/calmodulin-binding heat-shock protein [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=95.12 E-value=0.011 Score=58.65 Aligned_cols=125 Identities=15% Similarity=0.134 Sum_probs=74.2
Q ss_pred ECCCCeEEEEEcCCCcCChHHHHhhccccccccCCCCCCCceEehhhHHHHhcc-----chHHHHH--HHHHHHHHHcCC
Q 023358 93 AKDLNAIVIAFRGTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNT-----TIRPAII--NAVERAKDFYGD 165 (283)
Q Consensus 93 ~~~~~~ivVafRGT~~~s~~d~~~Dl~~~~~~~~~~~~~~~~vH~Gf~~~~~~~-----~~~~~i~--~~l~~~~~~~~~ 165 (283)
|...+..++..|||. +..|.++|+.....-. .|....+.+... ..+..+. +.+..+...+|.
T Consensus 313 d~~~~s~~~~~r~~~--sl~d~l~~v~~e~~~l---------~~~~~~d~~~~~~~~~~~~r~~~~~~~~l~~i~~~~~~ 381 (596)
T KOG2088|consen 313 DYVKQSDVLPVRGAT--SLDDLLTDVLLEPELL---------GLSCIRDDALPERQAAVDPRSTLAEGSRLLSIVSRKPC 381 (596)
T ss_pred hccccceeeeecccc--chhhhhhhhhcCcccc---------ccccchhhhhcccccccchhhhhCccchhhHHHhhCcc
Confidence 455678999999998 8999999987543111 111111111100 1111111 123334445565
Q ss_pred eEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCC-CCHHHHHHHhccCCCEEEEEECCCccCcCCCC
Q 023358 166 LNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI-GNAAFASYYTQLVPNTFRVTNYHDIVPHLPPY 238 (283)
Q Consensus 166 ~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prv-gn~~fa~~~~~~~~~~~riv~~~D~VP~lP~~ 238 (283)
+.. +.||||||+|+ .++.. ....+.++.|+.|.. ....-+++..+.. ..++-..|++|++...
T Consensus 382 ~~~-~~~~~l~g~l~----v~lr~--~~~~l~~~a~s~~~~~~s~~~~e~~~~~~---~svvl~~~~~~r~s~~ 445 (596)
T KOG2088|consen 382 RQG-IFGHVLGGGLG----VDLRR--EHPVLSCYAYSPPGGLWSERGAERGESFV---TSVVLGDDVMPRLSEQ 445 (596)
T ss_pred ccc-cccccccCccc----ccccc--CCCceeeeecCCCcceecchhHHHHHHHH---Hhhhcccccccccchh
Confidence 555 99999999944 33322 356789999996655 3444455555432 4678889999998764
No 65
>PRK10673 acyl-CoA esterase; Provisional
Probab=95.11 E-value=0.033 Score=48.32 Aligned_cols=25 Identities=24% Similarity=0.143 Sum_probs=20.5
Q ss_pred cCCeEEEEeccChhHHHHHHHhHHh
Q 023358 163 YGDLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 163 ~~~~~i~vTGHSLGGalA~l~a~~l 187 (283)
....++++.|||+||.+|..++...
T Consensus 78 l~~~~~~lvGhS~Gg~va~~~a~~~ 102 (255)
T PRK10673 78 LQIEKATFIGHSMGGKAVMALTALA 102 (255)
T ss_pred cCCCceEEEEECHHHHHHHHHHHhC
Confidence 3445799999999999999988653
No 66
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=95.00 E-value=0.16 Score=45.73 Aligned_cols=84 Identities=24% Similarity=0.255 Sum_probs=52.8
Q ss_pred eEEEEEcCCCcC-----ChHHHHhhccccccccCCCCCCCceEehhhHHHHhccchHHHHHHHHHHHHHHcC-CeEEEEe
Q 023358 98 AIVIAFRGTQEH-----SIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNTTIRPAIINAVERAKDFYG-DLNIMVT 171 (283)
Q Consensus 98 ~ivVafRGT~~~-----s~~d~~~Dl~~~~~~~~~~~~~~~~vH~Gf~~~~~~~~~~~~i~~~l~~~~~~~~-~~~i~vT 171 (283)
-.||+|-||-.+ -+.+++.+..+..+.++||+..... .+.-..|. ..+-.+.++.++++-. ..++++.
T Consensus 36 gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~--~~~~~~~~----n~er~~~~~~ll~~l~i~~~~i~~ 109 (297)
T PF06342_consen 36 GTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTP--GYPDQQYT----NEERQNFVNALLDELGIKGKLIFL 109 (297)
T ss_pred eeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCC--CCcccccC----hHHHHHHHHHHHHHcCCCCceEEE
Confidence 379999999642 1567788877777888888753211 11112222 1223333444444433 4689999
Q ss_pred ccChhHHHHHHHhHHh
Q 023358 172 GHSMGGAMAAFCGLDL 187 (283)
Q Consensus 172 GHSLGGalA~l~a~~l 187 (283)
|||.|+.-|..++...
T Consensus 110 gHSrGcenal~la~~~ 125 (297)
T PF06342_consen 110 GHSRGCENALQLAVTH 125 (297)
T ss_pred EeccchHHHHHHHhcC
Confidence 9999999998888754
No 67
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=94.98 E-value=0.054 Score=46.44 Aligned_cols=52 Identities=21% Similarity=0.194 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHcC--CeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCC
Q 023358 151 AIINAVERAKDFYG--DLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI 206 (283)
Q Consensus 151 ~i~~~l~~~~~~~~--~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prv 206 (283)
.+.+.++.+.++++ ..+|.+.|||+||.+|..++... +..-..++.++++..
T Consensus 78 ~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~----p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 78 SLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTY----PDVFAGGASNAGLPY 131 (212)
T ss_pred HHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhC----chhheEEEeecCCcc
Confidence 34455555555554 35899999999999998888742 222234556666543
No 68
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=94.94 E-value=0.11 Score=49.46 Aligned_cols=32 Identities=31% Similarity=0.361 Sum_probs=22.8
Q ss_pred HHHHHHHcCCeEEEEeccChhHHHHHHHhHHh
Q 023358 156 VERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 156 l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l 187 (283)
+..+.+.....++++.|||+||.+|..++...
T Consensus 166 i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~ 197 (402)
T PLN02894 166 FEEWRKAKNLSNFILLGHSFGGYVAAKYALKH 197 (402)
T ss_pred HHHHHHHcCCCCeEEEEECHHHHHHHHHHHhC
Confidence 33333333345899999999999999888753
No 69
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=94.79 E-value=0.043 Score=48.71 Aligned_cols=24 Identities=29% Similarity=0.284 Sum_probs=20.0
Q ss_pred CCeEEEEeccChhHHHHHHHhHHh
Q 023358 164 GDLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 164 ~~~~i~vTGHSLGGalA~l~a~~l 187 (283)
...++.+.|||+||.+|..+|.+.
T Consensus 89 ~~~~~~LvG~S~GG~va~~~a~~~ 112 (276)
T TIGR02240 89 DYGQVNAIGVSWGGALAQQFAHDY 112 (276)
T ss_pred CcCceEEEEECHHHHHHHHHHHHC
Confidence 345799999999999999888753
No 70
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=94.70 E-value=0.05 Score=50.28 Aligned_cols=42 Identities=24% Similarity=0.416 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhh
Q 023358 149 RPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVN 190 (283)
Q Consensus 149 ~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~ 190 (283)
.+...+.+++...+..--+.++.|||+||-||+..|+..-..
T Consensus 143 e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPer 184 (365)
T KOG4409|consen 143 EKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPER 184 (365)
T ss_pred hHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHh
Confidence 346677777777777777999999999999999999865443
No 71
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=94.69 E-value=0.048 Score=46.68 Aligned_cols=30 Identities=20% Similarity=0.278 Sum_probs=22.3
Q ss_pred HHHHHcCCeEEEEeccChhHHHHHHHhHHh
Q 023358 158 RAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 158 ~~~~~~~~~~i~vTGHSLGGalA~l~a~~l 187 (283)
++.+.....++.+.|||+||.+|..++...
T Consensus 72 ~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 101 (257)
T TIGR03611 72 QLLDALNIERFHFVGHALGGLIGLQLALRY 101 (257)
T ss_pred HHHHHhCCCcEEEEEechhHHHHHHHHHHC
Confidence 333333446799999999999999988643
No 72
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.67 E-value=0.083 Score=47.22 Aligned_cols=43 Identities=19% Similarity=0.204 Sum_probs=34.8
Q ss_pred hHHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhh
Q 023358 148 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVN 190 (283)
Q Consensus 148 ~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~ 190 (283)
+-+.+...+..+.+..|.-+..+.|||+||.+|.-+|..|...
T Consensus 47 l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL~~~ 89 (257)
T COG3319 47 LDDMAAAYVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQLEAQ 89 (257)
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeeccccHHHHHHHHHHHhC
Confidence 3445556666667778888999999999999999999988765
No 73
>PRK03204 haloalkane dehalogenase; Provisional
Probab=94.63 E-value=0.066 Score=48.12 Aligned_cols=35 Identities=14% Similarity=0.254 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHH
Q 023358 152 IINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 152 i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~ 186 (283)
..+.+..+.+.....++++.|||+||.+|..++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~ 121 (286)
T PRK03204 87 HARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVE 121 (286)
T ss_pred HHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHh
Confidence 33444444444455689999999999999887764
No 74
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=94.63 E-value=0.095 Score=44.57 Aligned_cols=37 Identities=22% Similarity=0.328 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHh
Q 023358 151 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 151 ~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l 187 (283)
...+.+.++.+..+...+.++|+||||-.|+.+|..+
T Consensus 44 ~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~ 80 (187)
T PF05728_consen 44 EAIAQLEQLIEELKPENVVLIGSSLGGFYATYLAERY 80 (187)
T ss_pred HHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHh
Confidence 3444455555555544599999999999999887643
No 75
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=94.62 E-value=0.072 Score=46.99 Aligned_cols=32 Identities=31% Similarity=0.326 Sum_probs=23.8
Q ss_pred HHHHHHHcCCeEEEEeccChhHHHHHHHhHHh
Q 023358 156 VERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 156 l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l 187 (283)
+.++.+.....++.+.|||+||.+|..++...
T Consensus 91 l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~ 122 (282)
T TIGR03343 91 VKGLMDALDIEKAHLVGNSMGGATALNFALEY 122 (282)
T ss_pred HHHHHHHcCCCCeeEEEECchHHHHHHHHHhC
Confidence 33344444556899999999999999988753
No 76
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=94.52 E-value=0.19 Score=44.07 Aligned_cols=76 Identities=21% Similarity=0.267 Sum_probs=56.7
Q ss_pred CCeEEEEeccChhHHHHHHHhHHhhhhc--CCcceEEEEecCCCCCCHHHHHHHhc--c-------C----C-----CEE
Q 023358 164 GDLNIMVTGHSMGGAMAAFCGLDLTVNL--GIQNVQVMTFGQPRIGNAAFASYYTQ--L-------V----P-----NTF 223 (283)
Q Consensus 164 ~~~~i~vTGHSLGGalA~l~a~~l~~~~--~~~~v~~~tFg~Prvgn~~fa~~~~~--~-------~----~-----~~~ 223 (283)
++.+++|.|+|.|+.+|.....++.... ...++..+.+|.|+--+.-+...+.. . . + .+.
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP~rp~GG~~~r~~~~~~ip~~g~t~~~~tp~~~~~~v~ 125 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNPRRPNGGILARFPGGSTIPILGVTFTGPTPTDTGYPVT 125 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCCCCCCCcchhccCccccccccccccCCCCCCCCCcceE
Confidence 5678999999999999999999988742 23578999999997655444443332 0 0 1 357
Q ss_pred EEEECCCccCcCCCCC
Q 023358 224 RVTNYHDIVPHLPPYY 239 (283)
Q Consensus 224 riv~~~D~VP~lP~~~ 239 (283)
.|..+.|.+...|...
T Consensus 126 ~v~~qYDg~aD~P~~p 141 (225)
T PF08237_consen 126 DVTRQYDGIADFPDYP 141 (225)
T ss_pred EEEEccCccccCCCCC
Confidence 7899999999998763
No 77
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=94.45 E-value=0.072 Score=41.86 Aligned_cols=59 Identities=22% Similarity=0.220 Sum_probs=36.6
Q ss_pred CCeEEEEeccChhHHHHHHHhHHhhhhcCCcce-EEEEecCCCCCCHHHHHHHhccCCCEEEEEECCCccC
Q 023358 164 GDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQPRIGNAAFASYYTQLVPNTFRVTNYHDIVP 233 (283)
Q Consensus 164 ~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v-~~~tFg~Prvgn~~fa~~~~~~~~~~~riv~~~D~VP 233 (283)
...+|.+.|||+||.+|..++..- ..+ .++.++++.- .+.+......++-+.-.+|.+-
T Consensus 59 ~~~~i~l~G~S~Gg~~a~~~~~~~------~~v~~~v~~~~~~~-----~~~~~~~~~pv~~i~g~~D~~~ 118 (145)
T PF12695_consen 59 DPDRIILIGHSMGGAIAANLAARN------PRVKAVVLLSPYPD-----SEDLAKIRIPVLFIHGENDPLV 118 (145)
T ss_dssp TCCEEEEEEETHHHHHHHHHHHHS------TTESEEEEESESSG-----CHHHTTTTSEEEEEEETT-SSS
T ss_pred CCCcEEEEEEccCcHHHHHHhhhc------cceeEEEEecCccc-----hhhhhccCCcEEEEEECCCCcC
Confidence 457999999999999999888732 234 4555555211 2223333335566666777765
No 78
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=94.39 E-value=0.093 Score=46.97 Aligned_cols=22 Identities=23% Similarity=0.368 Sum_probs=19.2
Q ss_pred CeEEEEeccChhHHHHHHHhHH
Q 023358 165 DLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 165 ~~~i~vTGHSLGGalA~l~a~~ 186 (283)
..++++.||||||.++..++..
T Consensus 86 ~~~v~lvGhS~GG~v~~~~a~~ 107 (273)
T PLN02211 86 NEKVILVGHSAGGLSVTQAIHR 107 (273)
T ss_pred CCCEEEEEECchHHHHHHHHHh
Confidence 4689999999999999888754
No 79
>PRK00870 haloalkane dehalogenase; Provisional
Probab=94.35 E-value=0.064 Score=48.32 Aligned_cols=31 Identities=6% Similarity=0.068 Sum_probs=22.8
Q ss_pred HHHHHHHcCCeEEEEeccChhHHHHHHHhHH
Q 023358 156 VERAKDFYGDLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 156 l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~ 186 (283)
+..+.+.....++++.|||+||.+|..++..
T Consensus 105 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~ 135 (302)
T PRK00870 105 MRSWFEQLDLTDVTLVCQDWGGLIGLRLAAE 135 (302)
T ss_pred HHHHHHHcCCCCEEEEEEChHHHHHHHHHHh
Confidence 3333333344589999999999999988864
No 80
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=94.24 E-value=0.056 Score=47.26 Aligned_cols=29 Identities=34% Similarity=0.197 Sum_probs=21.5
Q ss_pred HHHHHcCCeEEEEeccChhHHHHHHHhHH
Q 023358 158 RAKDFYGDLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 158 ~~~~~~~~~~i~vTGHSLGGalA~l~a~~ 186 (283)
.+.+.....++++.|||+||.+|..++..
T Consensus 87 ~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~ 115 (278)
T TIGR03056 87 ALCAAEGLSPDGVIGHSAGAAIALRLALD 115 (278)
T ss_pred HHHHHcCCCCceEEEECccHHHHHHHHHh
Confidence 33333344578999999999999888764
No 81
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=94.09 E-value=0.15 Score=47.09 Aligned_cols=36 Identities=33% Similarity=0.315 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHH
Q 023358 151 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 151 ~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~ 186 (283)
.+.+.+..+.+..+..++.+.|||+||.+|..++..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~ 217 (371)
T PRK14875 182 ELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAAR 217 (371)
T ss_pred HHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHh
Confidence 333444444455555689999999999999887764
No 82
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=94.01 E-value=0.12 Score=46.18 Aligned_cols=37 Identities=14% Similarity=0.110 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHcCC-eEEEEeccChhHHHHHHHhH
Q 023358 149 RPAIINAVERAKDFYGD-LNIMVTGHSMGGAMAAFCGL 185 (283)
Q Consensus 149 ~~~i~~~l~~~~~~~~~-~~i~vTGHSLGGalA~l~a~ 185 (283)
.+++...++.+.+..++ .+|++.|||+||.+|..++.
T Consensus 82 ~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~ 119 (274)
T TIGR03100 82 DADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAP 119 (274)
T ss_pred HHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhh
Confidence 34666667666655544 46999999999999888764
No 83
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=94.00 E-value=0.073 Score=53.85 Aligned_cols=39 Identities=28% Similarity=0.376 Sum_probs=26.8
Q ss_pred eEEEEeccChhHHHHHHHhHHhhhhcCCcce-EEEEecCCCC
Q 023358 166 LNIMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQPRI 206 (283)
Q Consensus 166 ~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v-~~~tFg~Prv 206 (283)
..|++.||||||-+|..+...= +.....| ..+|-++|-.
T Consensus 182 ~sVILVGHSMGGiVAra~~tlk--n~~~~sVntIITlssPH~ 221 (973)
T KOG3724|consen 182 HSVILVGHSMGGIVARATLTLK--NEVQGSVNTIITLSSPHA 221 (973)
T ss_pred ceEEEEeccchhHHHHHHHhhh--hhccchhhhhhhhcCccc
Confidence 4599999999999998776532 1112334 4678887655
No 84
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=93.91 E-value=0.098 Score=48.51 Aligned_cols=82 Identities=17% Similarity=0.135 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHH--cCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCCCCHHHHHHHhccCCCEEEEE
Q 023358 149 RPAIINAVERAKDF--YGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFASYYTQLVPNTFRVT 226 (283)
Q Consensus 149 ~~~i~~~l~~~~~~--~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prvgn~~fa~~~~~~~~~~~riv 226 (283)
-..+.+.|..+.+. .+-.+|.+.||||||-+|-+++-.+.....-..|...==+.|...+......+++.-..+.-|+
T Consensus 131 g~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F~~~~~~~rL~~~DA~fVdvI 210 (331)
T PF00151_consen 131 GRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLFENNPPSERLDKSDAKFVDVI 210 (331)
T ss_dssp HHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTTTTS-TTTS--GGGSSEEEEE
T ss_pred HHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccccCCChhHhhhccCCceEEEE
Confidence 34455555555533 2457899999999999999999988661112233333344454333222233333323567777
Q ss_pred ECCC
Q 023358 227 NYHD 230 (283)
Q Consensus 227 ~~~D 230 (283)
|.+-
T Consensus 211 HT~~ 214 (331)
T PF00151_consen 211 HTNA 214 (331)
T ss_dssp -SSE
T ss_pred EcCC
Confidence 7654
No 85
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=93.80 E-value=0.12 Score=43.80 Aligned_cols=41 Identities=20% Similarity=0.216 Sum_probs=29.4
Q ss_pred cCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCC
Q 023358 163 YGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQP 204 (283)
Q Consensus 163 ~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~P 204 (283)
.+..+|++.|||-||.||..++..+.... ...++.+..-+|
T Consensus 68 ~d~~~i~l~G~SAGg~la~~~~~~~~~~~-~~~~~~~~~~~p 108 (211)
T PF07859_consen 68 IDPERIVLIGDSAGGHLALSLALRARDRG-LPKPKGIILISP 108 (211)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHHHHHTT-TCHESEEEEESC
T ss_pred ccccceEEeecccccchhhhhhhhhhhhc-ccchhhhhcccc
Confidence 44679999999999999999998876652 233544444444
No 86
>PRK10566 esterase; Provisional
Probab=93.68 E-value=0.12 Score=44.92 Aligned_cols=35 Identities=23% Similarity=0.071 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHc--CCeEEEEeccChhHHHHHHHhH
Q 023358 151 AIINAVERAKDFY--GDLNIMVTGHSMGGAMAAFCGL 185 (283)
Q Consensus 151 ~i~~~l~~~~~~~--~~~~i~vTGHSLGGalA~l~a~ 185 (283)
++...+..+.+.. ...+|.+.|||+||.+|..++.
T Consensus 90 ~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~ 126 (249)
T PRK10566 90 EFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMA 126 (249)
T ss_pred HHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHH
Confidence 3334444444332 2468999999999999987765
No 87
>PRK03592 haloalkane dehalogenase; Provisional
Probab=93.68 E-value=0.15 Score=45.58 Aligned_cols=23 Identities=22% Similarity=0.339 Sum_probs=19.8
Q ss_pred CCeEEEEeccChhHHHHHHHhHH
Q 023358 164 GDLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 164 ~~~~i~vTGHSLGGalA~l~a~~ 186 (283)
...++++.|||+||.+|..++..
T Consensus 91 ~~~~~~lvGhS~Gg~ia~~~a~~ 113 (295)
T PRK03592 91 GLDDVVLVGHDWGSALGFDWAAR 113 (295)
T ss_pred CCCCeEEEEECHHHHHHHHHHHh
Confidence 44689999999999999988874
No 88
>PLN02442 S-formylglutathione hydrolase
Probab=93.54 E-value=0.11 Score=46.94 Aligned_cols=38 Identities=24% Similarity=0.184 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHH
Q 023358 149 RPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 149 ~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~ 186 (283)
.+++.+.+.+........++.++|||+||.+|..++..
T Consensus 126 ~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~ 163 (283)
T PLN02442 126 VKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLK 163 (283)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHh
Confidence 34444555444333345679999999999999888875
No 89
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=93.51 E-value=0.11 Score=47.11 Aligned_cols=36 Identities=22% Similarity=0.321 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHh
Q 023358 152 IINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 152 i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l 187 (283)
+.+.+..+.+..+..++++.|||+||.+|..++...
T Consensus 81 ~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~ 116 (306)
T TIGR01249 81 LVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTH 116 (306)
T ss_pred HHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHC
Confidence 334444444444556799999999999999888754
No 90
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=93.38 E-value=0.43 Score=43.98 Aligned_cols=82 Identities=21% Similarity=0.351 Sum_probs=49.9
Q ss_pred CCCe-EEEEEcCCCcCC-------hHHHHhhccccccccCCCCCCCc------eEehhhHHHHhccchHHHHHHHHHHHH
Q 023358 95 DLNA-IVIAFRGTQEHS-------IQNWIEDLFWKQLDINYPGMSDA------MVHHGFYSAYHNTTIRPAIINAVERAK 160 (283)
Q Consensus 95 ~~~~-ivVafRGT~~~s-------~~d~~~Dl~~~~~~~~~~~~~~~------~vH~Gf~~~~~~~~~~~~i~~~l~~~~ 160 (283)
+.+. .||.|-|=+.++ +..++..--+.-+-+++-+|.+- --|.|- .+++...+..++
T Consensus 72 ~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~---------t~D~~~~l~~l~ 142 (345)
T COG0429 72 AAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGE---------TEDIRFFLDWLK 142 (345)
T ss_pred ccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccc---------hhHHHHHHHHHH
Confidence 3455 899999887643 22333322233333445555332 223333 345666677777
Q ss_pred HHcCCeEEEEeccChhH-HHHHHHhH
Q 023358 161 DFYGDLNIMVTGHSMGG-AMAAFCGL 185 (283)
Q Consensus 161 ~~~~~~~i~vTGHSLGG-alA~l~a~ 185 (283)
+.++..+++.+|-|||| .||..++-
T Consensus 143 ~~~~~r~~~avG~SLGgnmLa~ylge 168 (345)
T COG0429 143 ARFPPRPLYAVGFSLGGNMLANYLGE 168 (345)
T ss_pred HhCCCCceEEEEecccHHHHHHHHHh
Confidence 78899999999999999 56665553
No 91
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=93.34 E-value=0.12 Score=47.95 Aligned_cols=35 Identities=31% Similarity=0.337 Sum_probs=24.7
Q ss_pred HHHHHHHHHHcCCeE-EEEeccChhHHHHHHHhHHh
Q 023358 153 INAVERAKDFYGDLN-IMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 153 ~~~l~~~~~~~~~~~-i~vTGHSLGGalA~l~a~~l 187 (283)
.+.+..+++...-.+ +.+.||||||.+|..++...
T Consensus 113 ~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~ 148 (351)
T TIGR01392 113 VKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDY 148 (351)
T ss_pred HHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHC
Confidence 333444444444455 99999999999999888753
No 92
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=93.14 E-value=0.17 Score=46.83 Aligned_cols=34 Identities=29% Similarity=0.306 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHc---CCeEEEEeccChhHHHHHHHhH
Q 023358 152 IINAVERAKDFY---GDLNIMVTGHSMGGAMAAFCGL 185 (283)
Q Consensus 152 i~~~l~~~~~~~---~~~~i~vTGHSLGGalA~l~a~ 185 (283)
-...++.+..+. ...+|+.-||||||++|+.+.-
T Consensus 198 ~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~ 234 (365)
T PF05677_consen 198 YQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALK 234 (365)
T ss_pred HHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHH
Confidence 334444444322 2378999999999999987543
No 93
>PRK11460 putative hydrolase; Provisional
Probab=92.83 E-value=0.16 Score=44.35 Aligned_cols=35 Identities=23% Similarity=0.172 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHc--CCeEEEEeccChhHHHHHHHhH
Q 023358 151 AIINAVERAKDFY--GDLNIMVTGHSMGGAMAAFCGL 185 (283)
Q Consensus 151 ~i~~~l~~~~~~~--~~~~i~vTGHSLGGalA~l~a~ 185 (283)
.+.+.++.+.+++ +..+|++.|||+||++|..++.
T Consensus 86 ~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~ 122 (232)
T PRK11460 86 TFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVK 122 (232)
T ss_pred HHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHH
Confidence 3444454444443 2468999999999999987665
No 94
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=92.77 E-value=0.17 Score=45.31 Aligned_cols=23 Identities=39% Similarity=0.407 Sum_probs=20.0
Q ss_pred CeEEEEeccChhHHHHHHHhHHh
Q 023358 165 DLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 165 ~~~i~vTGHSLGGalA~l~a~~l 187 (283)
..++.++|||+||.+|..+++..
T Consensus 137 ~~~~~~~G~S~GG~~a~~~a~~~ 159 (275)
T TIGR02821 137 GERQGITGHSMGGHGALVIALKN 159 (275)
T ss_pred CCceEEEEEChhHHHHHHHHHhC
Confidence 45899999999999999988753
No 95
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=92.74 E-value=0.14 Score=43.09 Aligned_cols=22 Identities=23% Similarity=0.243 Sum_probs=18.9
Q ss_pred CeEEEEeccChhHHHHHHHhHH
Q 023358 165 DLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 165 ~~~i~vTGHSLGGalA~l~a~~ 186 (283)
..++++.|||+||.+|..++..
T Consensus 64 ~~~~~lvG~S~Gg~~a~~~a~~ 85 (245)
T TIGR01738 64 PDPAIWLGWSLGGLVALHIAAT 85 (245)
T ss_pred CCCeEEEEEcHHHHHHHHHHHH
Confidence 3589999999999999888764
No 96
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=92.72 E-value=0.13 Score=44.88 Aligned_cols=36 Identities=31% Similarity=0.349 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHcC--CeEEEEeccChhHHHHHHHhHHh
Q 023358 152 IINAVERAKDFYG--DLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 152 i~~~l~~~~~~~~--~~~i~vTGHSLGGalA~l~a~~l 187 (283)
+...++.+..+++ ..+|+++|+|-||+||..++...
T Consensus 81 i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~ 118 (220)
T PF10503_consen 81 IAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAY 118 (220)
T ss_pred HHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhC
Confidence 4455566666665 57899999999999999988754
No 97
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=92.58 E-value=0.21 Score=46.19 Aligned_cols=35 Identities=20% Similarity=0.199 Sum_probs=26.7
Q ss_pred HHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHh
Q 023358 153 INAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 153 ~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l 187 (283)
...+.+...++...++.+.|||+||.+|..+|...
T Consensus 115 v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~ 149 (326)
T KOG1454|consen 115 VELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYY 149 (326)
T ss_pred HHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhC
Confidence 34445555555566799999999999999999864
No 98
>PRK10349 carboxylesterase BioH; Provisional
Probab=92.31 E-value=0.29 Score=42.70 Aligned_cols=22 Identities=27% Similarity=0.344 Sum_probs=19.0
Q ss_pred CeEEEEeccChhHHHHHHHhHH
Q 023358 165 DLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 165 ~~~i~vTGHSLGGalA~l~a~~ 186 (283)
..++.+.|||+||.+|..+|..
T Consensus 73 ~~~~~lvGhS~Gg~ia~~~a~~ 94 (256)
T PRK10349 73 PDKAIWLGWSLGGLVASQIALT 94 (256)
T ss_pred CCCeEEEEECHHHHHHHHHHHh
Confidence 4578999999999999988764
No 99
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=92.28 E-value=0.32 Score=47.39 Aligned_cols=29 Identities=17% Similarity=0.243 Sum_probs=22.8
Q ss_pred HHHHHcCCeEEEEeccChhHHHHHHHhHH
Q 023358 158 RAKDFYGDLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 158 ~~~~~~~~~~i~vTGHSLGGalA~l~a~~ 186 (283)
.+.+..+..++++.||||||.+|..++..
T Consensus 266 ~ll~~lg~~k~~LVGhSmGG~iAl~~A~~ 294 (481)
T PLN03087 266 SVLERYKVKSFHIVAHSLGCILALALAVK 294 (481)
T ss_pred HHHHHcCCCCEEEEEECHHHHHHHHHHHh
Confidence 34444556689999999999999888874
No 100
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=92.18 E-value=0.19 Score=46.80 Aligned_cols=22 Identities=14% Similarity=0.214 Sum_probs=18.2
Q ss_pred CCeEEEEeccChhHHHHHHHhH
Q 023358 164 GDLNIMVTGHSMGGAMAAFCGL 185 (283)
Q Consensus 164 ~~~~i~vTGHSLGGalA~l~a~ 185 (283)
...++++.|||+||.+|..++.
T Consensus 153 ~~~~~~lvGhS~Gg~ia~~~a~ 174 (360)
T PLN02679 153 VQKPTVLIGNSVGSLACVIAAS 174 (360)
T ss_pred cCCCeEEEEECHHHHHHHHHHH
Confidence 4468999999999999877664
No 101
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=92.01 E-value=0.23 Score=49.27 Aligned_cols=60 Identities=20% Similarity=0.227 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhh----------hcCCcce-EEEEecCCCCCCHH
Q 023358 151 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTV----------NLGIQNV-QVMTFGQPRIGNAA 210 (283)
Q Consensus 151 ~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~----------~~~~~~v-~~~tFg~Prvgn~~ 210 (283)
.+.+.|+.+.+...+.+++++||||||-++..+--++.. .+..+.| ..++.|+|-.|...
T Consensus 198 rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lGs~K 268 (642)
T PLN02517 198 RLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLGVPK 268 (642)
T ss_pred HHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCCcHH
Confidence 444555555555667899999999999888765433210 0011223 46777777776543
No 102
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=91.99 E-value=0.21 Score=46.14 Aligned_cols=21 Identities=14% Similarity=0.006 Sum_probs=17.9
Q ss_pred EEEEeccChhHHHHHHHhHHh
Q 023358 167 NIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 167 ~i~vTGHSLGGalA~l~a~~l 187 (283)
.+.+.||||||.+|..++...
T Consensus 139 ~~~lvG~SmGG~vA~~~A~~~ 159 (343)
T PRK08775 139 LHAFVGYSYGALVGLQFASRH 159 (343)
T ss_pred ceEEEEECHHHHHHHHHHHHC
Confidence 357999999999999988754
No 103
>PLN02578 hydrolase
Probab=91.91 E-value=0.23 Score=46.11 Aligned_cols=36 Identities=19% Similarity=0.301 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhh
Q 023358 149 RPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLT 188 (283)
Q Consensus 149 ~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~ 188 (283)
.+++.+.++.+. ..++++.|||+||.+|..+|....
T Consensus 139 a~~l~~~i~~~~----~~~~~lvG~S~Gg~ia~~~A~~~p 174 (354)
T PLN02578 139 RDQVADFVKEVV----KEPAVLVGNSLGGFTALSTAVGYP 174 (354)
T ss_pred HHHHHHHHHHhc----cCCeEEEEECHHHHHHHHHHHhCh
Confidence 345555555442 357899999999999999988653
No 104
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=91.83 E-value=0.2 Score=43.74 Aligned_cols=36 Identities=22% Similarity=0.452 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHH
Q 023358 150 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 150 ~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~ 186 (283)
+++...|.++++.-.- +|-|.|||+||.+|-.....
T Consensus 60 ~~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 60 KQLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp HHHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHH
Confidence 5677777777766556 99999999999999776553
No 105
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=91.81 E-value=2.6 Score=35.48 Aligned_cols=55 Identities=16% Similarity=0.241 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCCCCH
Q 023358 150 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNA 209 (283)
Q Consensus 150 ~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prvgn~ 209 (283)
++-.+.+.+....- ..++++++||||.+++.-.+.+... ..-.++--+.|-+.++
T Consensus 44 ~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~v~h~~~~~~~----~V~GalLVAppd~~~~ 98 (181)
T COG3545 44 DDWIARLEKEVNAA-EGPVVLVAHSLGCATVAHWAEHIQR----QVAGALLVAPPDVSRP 98 (181)
T ss_pred HHHHHHHHHHHhcc-CCCeEEEEecccHHHHHHHHHhhhh----ccceEEEecCCCcccc
Confidence 34444444433333 4469999999999988777765433 2234666677776654
No 106
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=91.80 E-value=0.29 Score=43.44 Aligned_cols=39 Identities=23% Similarity=0.345 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhh
Q 023358 152 IINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVN 190 (283)
Q Consensus 152 i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~ 190 (283)
+...+..+.+.|.-.++-++|||+||.-......+....
T Consensus 122 lk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~d 160 (288)
T COG4814 122 LKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDD 160 (288)
T ss_pred HHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCC
Confidence 344556667788888999999999997666666665544
No 107
>PRK07581 hypothetical protein; Validated
Probab=91.78 E-value=0.28 Score=45.00 Aligned_cols=25 Identities=24% Similarity=0.379 Sum_probs=20.1
Q ss_pred cCCeE-EEEeccChhHHHHHHHhHHh
Q 023358 163 YGDLN-IMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 163 ~~~~~-i~vTGHSLGGalA~l~a~~l 187 (283)
..-.+ ..|+||||||.+|..+|...
T Consensus 120 lgi~~~~~lvG~S~GG~va~~~a~~~ 145 (339)
T PRK07581 120 FGIERLALVVGWSMGAQQTYHWAVRY 145 (339)
T ss_pred hCCCceEEEEEeCHHHHHHHHHHHHC
Confidence 34456 57999999999999988764
No 108
>PLN00021 chlorophyllase
Probab=91.69 E-value=0.34 Score=44.53 Aligned_cols=23 Identities=30% Similarity=0.405 Sum_probs=20.2
Q ss_pred eEEEEeccChhHHHHHHHhHHhh
Q 023358 166 LNIMVTGHSMGGAMAAFCGLDLT 188 (283)
Q Consensus 166 ~~i~vTGHSLGGalA~l~a~~l~ 188 (283)
.++.+.|||+||.+|..++....
T Consensus 126 ~~v~l~GHS~GG~iA~~lA~~~~ 148 (313)
T PLN00021 126 SKLALAGHSRGGKTAFALALGKA 148 (313)
T ss_pred hheEEEEECcchHHHHHHHhhcc
Confidence 57999999999999999987653
No 109
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=91.57 E-value=0.83 Score=45.23 Aligned_cols=54 Identities=19% Similarity=0.193 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceE-EEEecCC
Q 023358 151 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQ-VMTFGQP 204 (283)
Q Consensus 151 ~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~-~~tFg~P 204 (283)
.+.++|+.+.+..+..+|.+.|||+||.+++++...++...+..+|+ ++.|++|
T Consensus 273 ~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatp 327 (560)
T TIGR01839 273 ALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSL 327 (560)
T ss_pred HHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecc
Confidence 56667766666667789999999999999996544444443333465 4446654
No 110
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=91.47 E-value=0.43 Score=39.67 Aligned_cols=34 Identities=21% Similarity=0.414 Sum_probs=25.9
Q ss_pred HHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhh
Q 023358 156 VERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTV 189 (283)
Q Consensus 156 l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~ 189 (283)
+.++.+...+-++++-|||+||-+|++.+-++..
T Consensus 79 ~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A 112 (213)
T COG3571 79 IAQLRAGLAEGPLIIGGKSMGGRVASMVADELQA 112 (213)
T ss_pred HHHHHhcccCCceeeccccccchHHHHHHHhhcC
Confidence 3344444445689999999999999999987743
No 111
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=91.43 E-value=0.087 Score=49.54 Aligned_cols=93 Identities=20% Similarity=0.295 Sum_probs=55.1
Q ss_pred CCCCeEEEEEcCCCcCChHHHHhhccccccccCCCCCCCceEehhhHHHHhcc-----chHHHHHHHHHHHHHHcCCeEE
Q 023358 94 KDLNAIVIAFRGTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNT-----TIRPAIINAVERAKDFYGDLNI 168 (283)
Q Consensus 94 ~~~~~ivVafRGT~~~s~~d~~~Dl~~~~~~~~~~~~~~~~vH~Gf~~~~~~~-----~~~~~i~~~l~~~~~~~~~~~i 168 (283)
.+.+.+||-.+|-.+.+..+|..-+. +.....|. ..-||+|+.+....+ .+-..+.+.+.+....+.-.+|
T Consensus 77 ~k~~HLvVlthGi~~~~~~~~~~~~~--~~~kk~p~--~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kI 152 (405)
T KOG4372|consen 77 TKPKHLVVLTHGLHGADMEYWKEKIE--QMTKKMPD--KLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKI 152 (405)
T ss_pred cCCceEEEeccccccccHHHHHHHHH--hhhcCCCc--ceEeeeccccchhhccccceeeecccHHHHhhhhhcccccee
Confidence 34467888888877434677776542 11112222 367899998766531 1222333333333223333689
Q ss_pred EEeccChhHHHHHHHhHHhhhh
Q 023358 169 MVTGHSMGGAMAAFCGLDLTVN 190 (283)
Q Consensus 169 ~vTGHSLGGalA~l~a~~l~~~ 190 (283)
-+.||||||=+|..+-.++...
T Consensus 153 SfvghSLGGLvar~AIgyly~~ 174 (405)
T KOG4372|consen 153 SFVGHSLGGLVARYAIGYLYEK 174 (405)
T ss_pred eeeeeecCCeeeeEEEEeeccc
Confidence 9999999998887776655444
No 112
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=91.05 E-value=0.49 Score=40.87 Aligned_cols=56 Identities=16% Similarity=0.105 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHcC-CeEEEEeccChhHHHHHHHhHHhhhhc--CCcceEEEEecCC
Q 023358 149 RPAIINAVERAKDFYG-DLNIMVTGHSMGGAMAAFCGLDLTVNL--GIQNVQVMTFGQP 204 (283)
Q Consensus 149 ~~~i~~~l~~~~~~~~-~~~i~vTGHSLGGalA~l~a~~l~~~~--~~~~v~~~tFg~P 204 (283)
..++..+.+..++.++ +.++++.|||.|+.+...+-.+..... ...-|-+|..|.|
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~~~~~pl~~rLVAAYliG~~ 135 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEEIAGDPLRKRLVAAYLIGYP 135 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHHhcCchHHhhhheeeecCcc
Confidence 3466777777666664 779999999999998766654432221 1233567777777
No 113
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=90.80 E-value=0.36 Score=45.35 Aligned_cols=34 Identities=35% Similarity=0.356 Sum_probs=23.9
Q ss_pred HHHHHHHHHcCCeE-EEEeccChhHHHHHHHhHHh
Q 023358 154 NAVERAKDFYGDLN-IMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 154 ~~l~~~~~~~~~~~-i~vTGHSLGGalA~l~a~~l 187 (283)
+.+..+.+..+-.+ ..+.|||+||.+|..++...
T Consensus 134 ~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~ 168 (379)
T PRK00175 134 RAQARLLDALGITRLAAVVGGSMGGMQALEWAIDY 168 (379)
T ss_pred HHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhC
Confidence 33344444444446 58999999999999988764
No 114
>PRK06489 hypothetical protein; Provisional
Probab=90.47 E-value=0.42 Score=44.43 Aligned_cols=22 Identities=32% Similarity=0.519 Sum_probs=18.1
Q ss_pred eEE-EEeccChhHHHHHHHhHHh
Q 023358 166 LNI-MVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 166 ~~i-~vTGHSLGGalA~l~a~~l 187 (283)
.++ ++.||||||.+|..++...
T Consensus 153 ~~~~~lvG~SmGG~vAl~~A~~~ 175 (360)
T PRK06489 153 KHLRLILGTSMGGMHAWMWGEKY 175 (360)
T ss_pred CceeEEEEECHHHHHHHHHHHhC
Confidence 455 5899999999999988753
No 115
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=90.34 E-value=0.87 Score=40.76 Aligned_cols=57 Identities=18% Similarity=0.169 Sum_probs=34.3
Q ss_pred hHHHHH---HHHHHHHHHc--CCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCC
Q 023358 148 IRPAII---NAVERAKDFY--GDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI 206 (283)
Q Consensus 148 ~~~~i~---~~l~~~~~~~--~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prv 206 (283)
+.+|+. +.+++....+ ++.+|++.|||.|+-+|.-...++.. ...+|.-...=-|.+
T Consensus 61 L~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~--~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 61 LQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPD--LKFRVKKVILLFPTI 122 (266)
T ss_pred HHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccc--cCCceeEEEEeCCcc
Confidence 444544 4445555444 67899999999999999766655431 123444333334554
No 116
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=90.21 E-value=0.56 Score=43.30 Aligned_cols=38 Identities=26% Similarity=0.240 Sum_probs=26.2
Q ss_pred CeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCCCC
Q 023358 165 DLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGN 208 (283)
Q Consensus 165 ~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prvgn 208 (283)
..+|.++|+|.||++|.++|.. ..+|+...-.-|-.+|
T Consensus 174 ~~rI~v~G~SqGG~lal~~aaL------d~rv~~~~~~vP~l~d 211 (320)
T PF05448_consen 174 GKRIGVTGGSQGGGLALAAAAL------DPRVKAAAADVPFLCD 211 (320)
T ss_dssp EEEEEEEEETHHHHHHHHHHHH------SST-SEEEEESESSSS
T ss_pred cceEEEEeecCchHHHHHHHHh------CccccEEEecCCCccc
Confidence 5799999999999999998873 2345544444454433
No 117
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.03 E-value=1.2 Score=43.22 Aligned_cols=74 Identities=18% Similarity=0.195 Sum_probs=51.7
Q ss_pred cCCeEEEEeccChhHHHHHHHhHHhhhhcCCcce-EEEEecCCCCCCHHHHHHHhcc-CCCEEEEEECCCccCcCC
Q 023358 163 YGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQPRIGNAAFASYYTQL-VPNTFRVTNYHDIVPHLP 236 (283)
Q Consensus 163 ~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v-~~~tFg~Prvgn~~fa~~~~~~-~~~~~riv~~~D~VP~lP 236 (283)
.+..+|.++|.|||+-+-.-+-.+|.++....-| .+|-||+|-+.....-.-.... .+++.++...+|.+=.+-
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~~w~k~r~vVsGRFVNgYs~nDW~L~~l 519 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAKLWLKARSVVSGRFVNGYSTNDWTLGYL 519 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHHHHHHHHhheecceeeeeecchHHHHHH
Confidence 3567899999999999888788888774222233 6999999999766433222233 356677777888765554
No 118
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=90.03 E-value=0.34 Score=41.76 Aligned_cols=81 Identities=16% Similarity=0.059 Sum_probs=40.8
Q ss_pred HHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcC---Ccce-EEEEecCCCCCCHHHHHHHhc--cCCCEEEEE
Q 023358 153 INAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLG---IQNV-QVMTFGQPRIGNAAFASYYTQ--LVPNTFRVT 226 (283)
Q Consensus 153 ~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~---~~~v-~~~tFg~Prvgn~~fa~~~~~--~~~~~~riv 226 (283)
++.|.+..++.+. =.=|.|.|.||++|.+++........ ...+ .++.++++...+..+.+.+.. +.-..++|+
T Consensus 90 l~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~~~~~~~~~i~iPtlHv~ 168 (212)
T PF03959_consen 90 LDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDYQELYDEPKISIPTLHVI 168 (212)
T ss_dssp HHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-GTTTT--TT---EEEEEE
T ss_pred HHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhhhhhhccccCCCCeEEEE
Confidence 3444444444332 23689999999999999887665432 2233 467777777655544333311 112468888
Q ss_pred ECCCccCc
Q 023358 227 NYHDIVPH 234 (283)
Q Consensus 227 ~~~D~VP~ 234 (283)
-.+|.+-.
T Consensus 169 G~~D~~~~ 176 (212)
T PF03959_consen 169 GENDPVVP 176 (212)
T ss_dssp ETT-SSS-
T ss_pred eCCCCCcc
Confidence 88887543
No 119
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=89.86 E-value=0.59 Score=43.42 Aligned_cols=46 Identities=26% Similarity=0.240 Sum_probs=32.3
Q ss_pred HcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCCCCHHHH
Q 023358 162 FYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFA 212 (283)
Q Consensus 162 ~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prvgn~~fa 212 (283)
..+-.++-+||-||||.+|.|+|... ..++-++.+=+|......|.
T Consensus 171 ~~G~~~~g~~G~SmGG~~A~laa~~~-----p~pv~~vp~ls~~sAs~vFt 216 (348)
T PF09752_consen 171 REGYGPLGLTGISMGGHMAALAASNW-----PRPVALVPCLSWSSASVVFT 216 (348)
T ss_pred hcCCCceEEEEechhHhhHHhhhhcC-----CCceeEEEeecccCCCcchh
Confidence 33555999999999999999999743 33566666666665544443
No 120
>PRK10162 acetyl esterase; Provisional
Probab=89.77 E-value=0.41 Score=43.88 Aligned_cols=25 Identities=28% Similarity=0.179 Sum_probs=21.7
Q ss_pred CeEEEEeccChhHHHHHHHhHHhhh
Q 023358 165 DLNIMVTGHSMGGAMAAFCGLDLTV 189 (283)
Q Consensus 165 ~~~i~vTGHSLGGalA~l~a~~l~~ 189 (283)
..+|.+.|||.||.||..+++.+..
T Consensus 153 ~~~i~l~G~SaGG~la~~~a~~~~~ 177 (318)
T PRK10162 153 MSRIGFAGDSAGAMLALASALWLRD 177 (318)
T ss_pred hhHEEEEEECHHHHHHHHHHHHHHh
Confidence 3689999999999999999887754
No 121
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=89.47 E-value=0.48 Score=45.95 Aligned_cols=59 Identities=17% Similarity=0.211 Sum_probs=42.2
Q ss_pred hHHHHHHHHHHHHHHcCC---eEEEEeccChhHHHHHHHhHHhhhhcC-----CcceEEEEecCCCC
Q 023358 148 IRPAIINAVERAKDFYGD---LNIMVTGHSMGGAMAAFCGLDLTVNLG-----IQNVQVMTFGQPRI 206 (283)
Q Consensus 148 ~~~~i~~~l~~~~~~~~~---~~i~vTGHSLGGalA~l~a~~l~~~~~-----~~~v~~~tFg~Prv 206 (283)
+.+++.+.++.+.+++|. .+++++|||.||..+..+|.++..... .-+++-+..|.|-+
T Consensus 150 ~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 150 VSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred HHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 445677778877777775 789999999999999888888754321 13455666666554
No 122
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=89.25 E-value=0.5 Score=44.83 Aligned_cols=36 Identities=22% Similarity=0.267 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHcCCeEEE-EeccChhHHHHHHHhHHh
Q 023358 152 IINAVERAKDFYGDLNIM-VTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 152 i~~~l~~~~~~~~~~~i~-vTGHSLGGalA~l~a~~l 187 (283)
+.+.+..+.+...-.++. +.||||||.+|...+...
T Consensus 146 ~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~ 182 (389)
T PRK06765 146 FVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHY 182 (389)
T ss_pred HHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHC
Confidence 334444555555556675 999999999999888754
No 123
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=89.01 E-value=0.54 Score=39.04 Aligned_cols=34 Identities=32% Similarity=0.445 Sum_probs=24.4
Q ss_pred HHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHh
Q 023358 154 NAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 154 ~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l 187 (283)
+.+..+.......++++.|||+||.+|..++...
T Consensus 76 ~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~ 109 (282)
T COG0596 76 DDLAALLDALGLEKVVLVGHSMGGAVALALALRH 109 (282)
T ss_pred HHHHHHHHHhCCCceEEEEecccHHHHHHHHHhc
Confidence 3344444444545599999999999998888754
No 124
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=88.81 E-value=0.42 Score=43.81 Aligned_cols=40 Identities=23% Similarity=0.355 Sum_probs=26.3
Q ss_pred CCceEehhhHHHHhccchHHHHHHHHHHHHHHcCCeEEEEeccChhH
Q 023358 131 SDAMVHHGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGG 177 (283)
Q Consensus 131 ~~~~vH~Gf~~~~~~~~~~~~i~~~l~~~~~~~~~~~i~vTGHSLGG 177 (283)
+...+|. +. .+.+.+...++.....+...++.+.|||+||
T Consensus 95 p~~~~h~-----~~--~ma~dv~~Fi~~v~~~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 95 PKITVHN-----YE--AMAEDVKLFIDGVGGSTRLDPVVLLGHSMGG 134 (315)
T ss_pred ccccccC-----HH--HHHHHHHHHHHHcccccccCCceecccCcch
Confidence 3456776 32 3445666666555443446789999999999
No 125
>KOG3101 consensus Esterase D [General function prediction only]
Probab=88.67 E-value=0.049 Score=47.10 Aligned_cols=78 Identities=24% Similarity=0.282 Sum_probs=46.4
Q ss_pred CeEEEEeccChhHHHHHHHhHHhhhhcCCcce-EEEEecC---CC---CCCHHHHHHHhccCCCEEEEEECCCccCcCCC
Q 023358 165 DLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQ---PR---IGNAAFASYYTQLVPNTFRVTNYHDIVPHLPP 237 (283)
Q Consensus 165 ~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v-~~~tFg~---Pr---vgn~~fa~~~~~~~~~~~riv~~~D~VP~lP~ 237 (283)
..++-++||||||-=|...++.= ..+- .|-.|+. |. -|.++|.-|+..... -....|.---+
T Consensus 140 ~~k~~IfGHSMGGhGAl~~~Lkn-----~~kykSvSAFAPI~NP~~cpWGqKAf~gYLG~~ka----~W~~yDat~li-- 208 (283)
T KOG3101|consen 140 PLKVGIFGHSMGGHGALTIYLKN-----PSKYKSVSAFAPICNPINCPWGQKAFTGYLGDNKA----QWEAYDATHLI-- 208 (283)
T ss_pred chhcceeccccCCCceEEEEEcC-----cccccceeccccccCcccCcchHHHhhcccCCChH----HHhhcchHHHH--
Confidence 35799999999998887666531 1122 3445543 21 177778777765321 11233432222
Q ss_pred CCCCCCCCcceecCceEEEecCC
Q 023358 238 YYSYFPQKTYHHFPREVWLYHIG 260 (283)
Q Consensus 238 ~~~~~~~~~y~H~g~ev~~~~~~ 260 (283)
..|.|.+.||.|+...
T Consensus 209 -------k~y~~~~~~ilIdqG~ 224 (283)
T KOG3101|consen 209 -------KNYRGVGDDILIDQGA 224 (283)
T ss_pred -------HhcCCCCccEEEecCc
Confidence 3688999999998654
No 126
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=88.43 E-value=0.89 Score=42.21 Aligned_cols=60 Identities=23% Similarity=0.287 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCCCCHH
Q 023358 149 RPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAA 210 (283)
Q Consensus 149 ~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prvgn~~ 210 (283)
-+++...+++.....+-.++.+.|||+||-++-+..-.+... ...-.++|.|.|.-|...
T Consensus 110 ~~ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~--~~V~~~~tl~tp~~Gt~~ 169 (336)
T COG1075 110 GEQLFAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGA--NRVASVVTLGTPHHGTEL 169 (336)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCcc--ceEEEEEEeccCCCCchh
Confidence 457777788777777778999999999999998555433211 223468899999887653
No 127
>PLN02872 triacylglycerol lipase
Probab=88.27 E-value=0.62 Score=44.29 Aligned_cols=34 Identities=18% Similarity=0.239 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHh
Q 023358 150 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCG 184 (283)
Q Consensus 150 ~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a 184 (283)
.++.+.++.+.+.. ..++.+.|||+||.+|..++
T Consensus 145 ~Dl~a~id~i~~~~-~~~v~~VGhS~Gg~~~~~~~ 178 (395)
T PLN02872 145 YDLAEMIHYVYSIT-NSKIFIVGHSQGTIMSLAAL 178 (395)
T ss_pred HHHHHHHHHHHhcc-CCceEEEEECHHHHHHHHHh
Confidence 35555555554432 46899999999999886433
No 128
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=88.13 E-value=2.1 Score=35.27 Aligned_cols=30 Identities=27% Similarity=0.379 Sum_probs=24.0
Q ss_pred HHcCCeEEEEeccChhHHHHHHHhHHhhhh
Q 023358 161 DFYGDLNIMVTGHSMGGAMAAFCGLDLTVN 190 (283)
Q Consensus 161 ~~~~~~~i~vTGHSLGGalA~l~a~~l~~~ 190 (283)
...+..++.+.|||+||.+|...+..+...
T Consensus 59 ~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~ 88 (212)
T smart00824 59 RAAGGRPFVLVGHSSGGLLAHAVAARLEAR 88 (212)
T ss_pred HhcCCCCeEEEEECHHHHHHHHHHHHHHhC
Confidence 344567899999999999998888877543
No 129
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=88.12 E-value=0.39 Score=41.81 Aligned_cols=36 Identities=33% Similarity=0.489 Sum_probs=25.6
Q ss_pred hHHHHHHHHHHHHHHcC---CeEEEEeccChhHHHHHHHhHHh
Q 023358 148 IRPAIINAVERAKDFYG---DLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 148 ~~~~i~~~l~~~~~~~~---~~~i~vTGHSLGGalA~l~a~~l 187 (283)
+.+++...|+ ++++ .. ..|.||||||..|..+++.-
T Consensus 98 l~~el~p~i~---~~~~~~~~~-~~i~G~S~GG~~Al~~~l~~ 136 (251)
T PF00756_consen 98 LTEELIPYIE---ANYRTDPDR-RAIAGHSMGGYGALYLALRH 136 (251)
T ss_dssp HHTHHHHHHH---HHSSEEECC-EEEEEETHHHHHHHHHHHHS
T ss_pred hhccchhHHH---Hhcccccce-eEEeccCCCcHHHHHHHHhC
Confidence 4455655554 3444 22 89999999999999888753
No 130
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=87.76 E-value=2.1 Score=40.76 Aligned_cols=82 Identities=20% Similarity=0.389 Sum_probs=48.9
Q ss_pred CCCeEEEEEcCCCcCChHHHHhhcc-------ccccccCCCCCCCceEeh-hhHHHHhccchHHHHHHHHHHHHHHcCCe
Q 023358 95 DLNAIVIAFRGTQEHSIQNWIEDLF-------WKQLDINYPGMSDAMVHH-GFYSAYHNTTIRPAIINAVERAKDFYGDL 166 (283)
Q Consensus 95 ~~~~ivVafRGT~~~s~~d~~~Dl~-------~~~~~~~~~~~~~~~vH~-Gf~~~~~~~~~~~~i~~~l~~~~~~~~~~ 166 (283)
+.+-+||..-|....|....+.-+- +..+-++--|+.+.++-+ =++.+ ...+++.+.++.++++||..
T Consensus 123 ~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~a----g~t~Dl~~~v~~i~~~~P~a 198 (409)
T KOG1838|consen 123 GTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTA----GWTEDLREVVNHIKKRYPQA 198 (409)
T ss_pred CCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeec----CCHHHHHHHHHHHHHhCCCC
Confidence 3456888889988766444443332 111111111222222110 01111 34568888899999999999
Q ss_pred EEEEeccChhHHHH
Q 023358 167 NIMVTGHSMGGAMA 180 (283)
Q Consensus 167 ~i~vTGHSLGGalA 180 (283)
++..+|-||||.+=
T Consensus 199 ~l~avG~S~Gg~iL 212 (409)
T KOG1838|consen 199 PLFAVGFSMGGNIL 212 (409)
T ss_pred ceEEEEecchHHHH
Confidence 99999999999743
No 131
>PRK05855 short chain dehydrogenase; Validated
Probab=87.73 E-value=0.69 Score=45.24 Aligned_cols=22 Identities=14% Similarity=0.058 Sum_probs=17.6
Q ss_pred CeEEEEeccChhHHHHHHHhHH
Q 023358 165 DLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 165 ~~~i~vTGHSLGGalA~l~a~~ 186 (283)
+.++++.|||+||.+|..++..
T Consensus 93 ~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 93 DRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred CCcEEEEecChHHHHHHHHHhC
Confidence 4569999999999888766544
No 132
>COG1647 Esterase/lipase [General function prediction only]
Probab=87.12 E-value=1.4 Score=38.41 Aligned_cols=53 Identities=21% Similarity=0.233 Sum_probs=35.6
Q ss_pred chHHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCC
Q 023358 147 TIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI 206 (283)
Q Consensus 147 ~~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prv 206 (283)
.|.+.+.+..+.++++ .--.|.++|-||||-+|..+|..+ +.-++++..+|.-
T Consensus 67 DW~~~v~d~Y~~L~~~-gy~eI~v~GlSmGGv~alkla~~~------p~K~iv~m~a~~~ 119 (243)
T COG1647 67 DWWEDVEDGYRDLKEA-GYDEIAVVGLSMGGVFALKLAYHY------PPKKIVPMCAPVN 119 (243)
T ss_pred HHHHHHHHHHHHHHHc-CCCeEEEEeecchhHHHHHHHhhC------CccceeeecCCcc
Confidence 3556677777766633 234799999999999998888643 2224556665543
No 133
>PRK04940 hypothetical protein; Provisional
Probab=86.98 E-value=0.94 Score=38.26 Aligned_cols=22 Identities=23% Similarity=0.294 Sum_probs=18.8
Q ss_pred eEEEEeccChhHHHHHHHhHHh
Q 023358 166 LNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 166 ~~i~vTGHSLGGalA~l~a~~l 187 (283)
.++.++|+||||--|+.+|...
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~ 81 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC 81 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH
Confidence 4689999999999999888653
No 134
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=86.94 E-value=1.4 Score=41.66 Aligned_cols=45 Identities=7% Similarity=-0.056 Sum_probs=27.8
Q ss_pred HHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCC
Q 023358 156 VERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQP 204 (283)
Q Consensus 156 l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~P 204 (283)
+..+.+.....++.+.|||+||++|..++... +..--.++..++|
T Consensus 187 l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~----P~~v~~lILi~~~ 231 (383)
T PLN03084 187 LESLIDELKSDKVSLVVQGYFSPPVVKYASAH----PDKIKKLILLNPP 231 (383)
T ss_pred HHHHHHHhCCCCceEEEECHHHHHHHHHHHhC----hHhhcEEEEECCC
Confidence 33333333445799999999999987777643 2222345555554
No 135
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=86.57 E-value=1.7 Score=41.47 Aligned_cols=21 Identities=14% Similarity=0.229 Sum_probs=18.7
Q ss_pred CeEEEEeccChhHHHHHHHhH
Q 023358 165 DLNIMVTGHSMGGAMAAFCGL 185 (283)
Q Consensus 165 ~~~i~vTGHSLGGalA~l~a~ 185 (283)
..+|.+.|||+||.+|..+|.
T Consensus 264 ~~ri~l~G~S~GG~~Al~~A~ 284 (414)
T PRK05077 264 HTRVAAFGFRFGANVAVRLAY 284 (414)
T ss_pred cccEEEEEEChHHHHHHHHHH
Confidence 468999999999999998875
No 136
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=85.41 E-value=1.1 Score=38.34 Aligned_cols=53 Identities=17% Similarity=0.207 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHH-cCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCCC
Q 023358 151 AIINAVERAKDF-YGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIG 207 (283)
Q Consensus 151 ~i~~~l~~~~~~-~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prvg 207 (283)
.+.+.|....+. .+..+|++.|.|.||+||..+++.... .--.++.+++.-..
T Consensus 89 ~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~----~~~gvv~lsG~~~~ 142 (216)
T PF02230_consen 89 RLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPE----PLAGVVALSGYLPP 142 (216)
T ss_dssp HHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSS----TSSEEEEES---TT
T ss_pred HHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCc----CcCEEEEeeccccc
Confidence 344444443332 346789999999999999988875322 22257777765443
No 137
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=85.24 E-value=1.1 Score=50.35 Aligned_cols=34 Identities=18% Similarity=0.313 Sum_probs=24.2
Q ss_pred HHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHh
Q 023358 154 NAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 154 ~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l 187 (283)
+.+..+.+.....++++.||||||.+|..++...
T Consensus 1433 ~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~ 1466 (1655)
T PLN02980 1433 DLLYKLIEHITPGKVTLVGYSMGARIALYMALRF 1466 (1655)
T ss_pred HHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhC
Confidence 3333334444456899999999999999888653
No 138
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=84.94 E-value=2.4 Score=38.45 Aligned_cols=55 Identities=25% Similarity=0.338 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHc------CCeEEEEeccChhHHHHHHHhHHhhhhcC-Ccc--eEEEEecCCCC
Q 023358 151 AIINAVERAKDFY------GDLNIMVTGHSMGGAMAAFCGLDLTVNLG-IQN--VQVMTFGQPRI 206 (283)
Q Consensus 151 ~i~~~l~~~~~~~------~~~~i~vTGHSLGGalA~l~a~~l~~~~~-~~~--v~~~tFg~Prv 206 (283)
.+++.++-+++.. ++.++.+.|||-|| .|++.|.++...+- .-+ +.-..-|+|..
T Consensus 50 avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG-~Aa~~AA~l~~~YApeL~~~l~Gaa~gg~~~ 113 (290)
T PF03583_consen 50 AVLDAVRAARNLPPKLGLSPSSRVALWGYSQGG-QAALWAAELAPSYAPELNRDLVGAAAGGPPA 113 (290)
T ss_pred HHHHHHHHHHhcccccCCCCCCCEEEEeeCccH-HHHHHHHHHhHHhCcccccceeEEeccCCcc
Confidence 4555555444322 25689999999765 45567777766642 234 55566677755
No 139
>COG3150 Predicted esterase [General function prediction only]
Probab=84.85 E-value=1.6 Score=36.45 Aligned_cols=62 Identities=19% Similarity=0.355 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCCCCHHHHHHHhcc
Q 023358 150 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFASYYTQL 218 (283)
Q Consensus 150 ~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prvgn~~fa~~~~~~ 218 (283)
.++++.|.++.....+.++.++|=||||-.|+-++... .++.+.|+..---...++.++.+.
T Consensus 43 ~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~-------Girav~~NPav~P~e~l~gylg~~ 104 (191)
T COG3150 43 QQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLC-------GIRAVVFNPAVRPYELLTGYLGRP 104 (191)
T ss_pred HHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHh-------CChhhhcCCCcCchhhhhhhcCCC
Confidence 34556666666666766799999999999999888643 344555654433456677777664
No 140
>PRK07868 acyl-CoA synthetase; Validated
Probab=84.47 E-value=1.9 Score=45.79 Aligned_cols=49 Identities=24% Similarity=0.450 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcce-EEEEecCC
Q 023358 151 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQP 204 (283)
Q Consensus 151 ~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v-~~~tFg~P 204 (283)
.+.+.+..+.+. ...++.+.|||+||.+|..++.. .+...| .++.+++|
T Consensus 127 ~l~~~l~~v~~~-~~~~v~lvG~s~GG~~a~~~aa~----~~~~~v~~lvl~~~~ 176 (994)
T PRK07868 127 ALSEAIDTVKDV-TGRDVHLVGYSQGGMFCYQAAAY----RRSKDIASIVTFGSP 176 (994)
T ss_pred HHHHHHHHHHHh-hCCceEEEEEChhHHHHHHHHHh----cCCCccceEEEEecc
Confidence 344444433322 23589999999999999777653 122344 46666666
No 141
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=84.42 E-value=2.3 Score=38.59 Aligned_cols=26 Identities=31% Similarity=0.336 Sum_probs=23.3
Q ss_pred CeEEEEeccChhHHHHHHHhHHhhhh
Q 023358 165 DLNIMVTGHSMGGAMAAFCGLDLTVN 190 (283)
Q Consensus 165 ~~~i~vTGHSLGGalA~l~a~~l~~~ 190 (283)
..+|.|.|||-||.||..++......
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~ 176 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDR 176 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhc
Confidence 56899999999999999999988764
No 142
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=84.00 E-value=0.83 Score=43.18 Aligned_cols=20 Identities=40% Similarity=0.418 Sum_probs=16.7
Q ss_pred eEEEEeccChhHHHHHHHhH
Q 023358 166 LNIMVTGHSMGGAMAAFCGL 185 (283)
Q Consensus 166 ~~i~vTGHSLGGalA~l~a~ 185 (283)
.+|.+.|||+|||-|..++.
T Consensus 228 ~~i~~~GHSFGGATa~~~l~ 247 (379)
T PF03403_consen 228 SRIGLAGHSFGGATALQALR 247 (379)
T ss_dssp EEEEEEEETHHHHHHHHHHH
T ss_pred hheeeeecCchHHHHHHHHh
Confidence 47999999999998876554
No 143
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=83.31 E-value=1.1 Score=43.07 Aligned_cols=34 Identities=21% Similarity=0.380 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhH
Q 023358 152 IINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGL 185 (283)
Q Consensus 152 i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~ 185 (283)
+...|+...+.+++++|++.+|||||-+-...--
T Consensus 168 LK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~ 201 (473)
T KOG2369|consen 168 LKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLK 201 (473)
T ss_pred HHHHHHHHHHHcCCCceEEEecCCccHHHHHHHh
Confidence 3344444445566799999999999977655443
No 144
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=82.14 E-value=2.8 Score=36.34 Aligned_cols=36 Identities=19% Similarity=0.220 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHcC-CeEEEEeccChhHHHHHHHhHHh
Q 023358 152 IINAVERAKDFYG-DLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 152 i~~~l~~~~~~~~-~~~i~vTGHSLGGalA~l~a~~l 187 (283)
+.+-++=+.+.++ -++|+|-|||.|+-||.-+-+++
T Consensus 121 ~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~ 157 (270)
T KOG4627|consen 121 FTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQ 157 (270)
T ss_pred HHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHh
Confidence 3344444555666 45699999999999998776654
No 145
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=81.03 E-value=3.1 Score=41.20 Aligned_cols=37 Identities=14% Similarity=0.045 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHH-cCCeEEEEeccChhHHHHHHHhHH
Q 023358 150 PAIINAVERAKDF-YGDLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 150 ~~i~~~l~~~~~~-~~~~~i~vTGHSLGGalA~l~a~~ 186 (283)
+++.+.++-+.++ ..+.+|.++|||+||.+|.++|..
T Consensus 80 ~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~ 117 (550)
T TIGR00976 80 ADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVL 117 (550)
T ss_pred hHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhcc
Confidence 3455555544332 335699999999999999888764
No 146
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=81.00 E-value=4 Score=34.94 Aligned_cols=38 Identities=16% Similarity=0.121 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHcCCeEE-EEeccChhHHHHHHHhHHh
Q 023358 150 PAIINAVERAKDFYGDLNI-MVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 150 ~~i~~~l~~~~~~~~~~~i-~vTGHSLGGalA~l~a~~l 187 (283)
++...++.-+++.+|+.+. |+.|.|.|+.+|+.++...
T Consensus 86 ~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~ 124 (210)
T COG2945 86 EDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRR 124 (210)
T ss_pred HHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhc
Confidence 4556667777788998877 9999999999999999865
No 147
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=80.91 E-value=2 Score=44.38 Aligned_cols=24 Identities=21% Similarity=0.270 Sum_probs=20.9
Q ss_pred cCCeEEEEeccChhHHHHHHHhHH
Q 023358 163 YGDLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 163 ~~~~~i~vTGHSLGGalA~l~a~~ 186 (283)
++..++.+.||||||-++..++..
T Consensus 552 ~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 552 IDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred CCCCcEEEEecCHHHHHHHHHHHh
Confidence 557899999999999999888864
No 148
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=80.89 E-value=4 Score=34.01 Aligned_cols=38 Identities=16% Similarity=0.077 Sum_probs=21.8
Q ss_pred CeEEEEeccChhHHHHHHHhHHhhhhcCCcceE-EEEecCCCC
Q 023358 165 DLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQ-VMTFGQPRI 206 (283)
Q Consensus 165 ~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~-~~tFg~Prv 206 (283)
+.+++++|||||...+.-.+. .. ...+|. ++--+.|-.
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l~---~~-~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWLA---EQ-SQKKVAGALLVAPFDP 92 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHHH---HT-CCSSEEEEEEES--SC
T ss_pred CCCeEEEEeCHHHHHHHHHHh---hc-ccccccEEEEEcCCCc
Confidence 446999999999876554443 22 234554 555555543
No 149
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=79.76 E-value=1.6 Score=32.97 Aligned_cols=20 Identities=30% Similarity=0.549 Sum_probs=12.4
Q ss_pred CcchhHHHHHHHHH-HHHhhc
Q 023358 1 MGQKKWLILLVFMC-LFTFSC 20 (283)
Q Consensus 1 ~~~~~~~~~~~~~~-~~~~~~ 20 (283)
|+-|++|+|+++++ ||+|+.
T Consensus 1 MaSK~~llL~l~LA~lLlisS 21 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALLLISS 21 (95)
T ss_pred CchhHHHHHHHHHHHHHHHHh
Confidence 77788777766544 444443
No 150
>PF09125 COX2-transmemb: Cytochrome C oxidase subunit II, transmembrane; InterPro: IPR015209 This N-terminal domain forms the transmembrane region in subunit II of cytochrome c oxidase from Thermus thermophilus. This domain adopts a tertiary structure consisting of two antiparallel transmembrane helices, in a transmembrane helix hairpin fold []. ; PDB: 1EHK_B 2QPE_B 3S8F_B 4EV3_B 3BVD_B 3S8G_B 3EH3_B 3S3C_B 3S39_B 3QJQ_B ....
Probab=78.39 E-value=2.2 Score=26.02 Aligned_cols=17 Identities=18% Similarity=0.530 Sum_probs=14.4
Q ss_pred chhHHHHHHHHHHHHhh
Q 023358 3 QKKWLILLVFMCLFTFS 19 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~~ 19 (283)
.|+||+|++.+.+++++
T Consensus 13 Er~Wi~F~l~mi~vFi~ 29 (38)
T PF09125_consen 13 ERGWIAFALAMILVFIA 29 (38)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHH
Confidence 58999999998888774
No 151
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=78.19 E-value=1 Score=39.74 Aligned_cols=36 Identities=22% Similarity=0.290 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhH
Q 023358 150 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGL 185 (283)
Q Consensus 150 ~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~ 185 (283)
.++-.+|..+++.-|+.+++++|||+||-+--|++-
T Consensus 89 ~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~ 124 (281)
T COG4757 89 LDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQ 124 (281)
T ss_pred cchHHHHHHHHhhCCCCceEEeeccccceeeccccc
Confidence 344445555555568889999999999977666553
No 152
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=77.33 E-value=9.5 Score=32.40 Aligned_cols=37 Identities=22% Similarity=0.222 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHc--CCeEEEEeccChhHHHHHHHhHH
Q 023358 150 PAIINAVERAKDFY--GDLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 150 ~~i~~~l~~~~~~~--~~~~i~vTGHSLGGalA~l~a~~ 186 (283)
+.+...++.+.+.. ...+|-++|.|+||.+|..++..
T Consensus 80 ~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~ 118 (218)
T PF01738_consen 80 ADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAAR 118 (218)
T ss_dssp HHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhh
Confidence 34444455444432 25799999999999999888763
No 153
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=76.42 E-value=3.9 Score=37.26 Aligned_cols=36 Identities=31% Similarity=0.397 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHcC--CeEEEEeccChhHHHHHHHhHHh
Q 023358 152 IINAVERAKDFYG--DLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 152 i~~~l~~~~~~~~--~~~i~vTGHSLGGalA~l~a~~l 187 (283)
+.+.+..+..++. ..+|++||-|-||.||..++.+.
T Consensus 128 lr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~ 165 (312)
T COG3509 128 LRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEY 165 (312)
T ss_pred HHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcC
Confidence 3445556666775 45999999999999999998864
No 154
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=76.18 E-value=2.8 Score=42.17 Aligned_cols=38 Identities=29% Similarity=0.267 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHcC---CeEEEEeccChhHHHHHHHhHHh
Q 023358 149 RPAIINAVERAKDFYG---DLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 149 ~~~i~~~l~~~~~~~~---~~~i~vTGHSLGGalA~l~a~~l 187 (283)
.+++.+.++ .+.++| ..+|-++|||-||-|+.+++...
T Consensus 454 ~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~ 494 (620)
T COG1506 454 LEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKT 494 (620)
T ss_pred HHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcC
Confidence 467777777 666766 35799999999999998888754
No 155
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=75.00 E-value=2.2 Score=38.42 Aligned_cols=37 Identities=30% Similarity=0.266 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHcC--CeEEEEeccChhHHHHHHHhH
Q 023358 149 RPAIINAVERAKDFYG--DLNIMVTGHSMGGAMAAFCGL 185 (283)
Q Consensus 149 ~~~i~~~l~~~~~~~~--~~~i~vTGHSLGGalA~l~a~ 185 (283)
..++..+++-+.+-.+ ..+|-+||-|.||+||..++.
T Consensus 157 ~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaa 195 (321)
T COG3458 157 FLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAA 195 (321)
T ss_pred hHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhh
Confidence 3444445544443332 578999999999999988775
No 156
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=74.55 E-value=7.5 Score=42.22 Aligned_cols=28 Identities=21% Similarity=0.185 Sum_probs=23.2
Q ss_pred cCCeEEEEeccChhHHHHHHHhHHhhhh
Q 023358 163 YGDLNIMVTGHSMGGAMAAFCGLDLTVN 190 (283)
Q Consensus 163 ~~~~~i~vTGHSLGGalA~l~a~~l~~~ 190 (283)
.+..++.+.|||+||.+|.-+|..+...
T Consensus 1130 ~~~~p~~l~G~S~Gg~vA~e~A~~l~~~ 1157 (1296)
T PRK10252 1130 QPHGPYHLLGYSLGGTLAQGIAARLRAR 1157 (1296)
T ss_pred CCCCCEEEEEechhhHHHHHHHHHHHHc
Confidence 4556899999999999999998877543
No 157
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=74.42 E-value=4.5 Score=36.10 Aligned_cols=37 Identities=22% Similarity=0.383 Sum_probs=25.4
Q ss_pred chHHHHHHHHHHHHHHcC-CeEEEEeccChhHHHHHHH
Q 023358 147 TIRPAIINAVERAKDFYG-DLNIMVTGHSMGGAMAAFC 183 (283)
Q Consensus 147 ~~~~~i~~~l~~~~~~~~-~~~i~vTGHSLGGalA~l~ 183 (283)
++.+|+...+.=+++--| +.+|++.|||.|+-+-.-.
T Consensus 90 sL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqi 127 (301)
T KOG3975|consen 90 SLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQI 127 (301)
T ss_pred chhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHH
Confidence 356777766654433334 8899999999999865433
No 158
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=74.26 E-value=4.4 Score=38.50 Aligned_cols=35 Identities=34% Similarity=0.535 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHcC----CeEEEEeccChhHHHHHHHhH
Q 023358 151 AIINAVERAKDFYG----DLNIMVTGHSMGGAMAAFCGL 185 (283)
Q Consensus 151 ~i~~~l~~~~~~~~----~~~i~vTGHSLGGalA~l~a~ 185 (283)
+++++|..+++.++ +.+++..|||-||-||.|+|-
T Consensus 165 D~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k 203 (403)
T PF11144_consen 165 DIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAK 203 (403)
T ss_pred HHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHh
Confidence 45566666666554 368999999999999999885
No 159
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=73.37 E-value=4.2 Score=36.24 Aligned_cols=38 Identities=18% Similarity=0.188 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHc-CCeEEEEeccChhHHHHHHHhHH
Q 023358 149 RPAIINAVERAKDFY-GDLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 149 ~~~i~~~l~~~~~~~-~~~~i~vTGHSLGGalA~l~a~~ 186 (283)
.+++....+-+++++ +..+|++-|||+|.+.+..+|.+
T Consensus 112 y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr 150 (258)
T KOG1552|consen 112 YADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASR 150 (258)
T ss_pred hhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhc
Confidence 445666666667777 57899999999999986555553
No 160
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=72.35 E-value=4.3 Score=38.77 Aligned_cols=37 Identities=24% Similarity=0.454 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHHHHHcC----CeEEEEeccChhHHHHHHHhHHh
Q 023358 148 IRPAIINAVERAKDFYG----DLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 148 ~~~~i~~~l~~~~~~~~----~~~i~vTGHSLGGalA~l~a~~l 187 (283)
+.++++..|++ +|+ ..+..|.|+||||-.|..+++..
T Consensus 269 l~~eLlP~I~~---~y~~~~d~~~~~IaG~S~GGl~AL~~al~~ 309 (411)
T PRK10439 269 VQQELLPQVRA---IAPFSDDADRTVVAGQSFGGLAALYAGLHW 309 (411)
T ss_pred HHHHHHHHHHH---hCCCCCCccceEEEEEChHHHHHHHHHHhC
Confidence 44566665543 232 34688999999999999998864
No 161
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=71.43 E-value=11 Score=32.29 Aligned_cols=22 Identities=23% Similarity=0.255 Sum_probs=20.1
Q ss_pred eEEEEeccChhHHHHHHHhHHh
Q 023358 166 LNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 166 ~~i~vTGHSLGGalA~l~a~~l 187 (283)
.+|-|.|.|.||-+|.++|..+
T Consensus 22 ~~Igi~G~SkGaelALllAs~~ 43 (213)
T PF08840_consen 22 DKIGIIGISKGAELALLLASRF 43 (213)
T ss_dssp SSEEEEEETHHHHHHHHHHHHS
T ss_pred CCEEEEEECHHHHHHHHHHhcC
Confidence 5799999999999999999864
No 162
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=71.29 E-value=14 Score=31.57 Aligned_cols=43 Identities=14% Similarity=0.266 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhh
Q 023358 148 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVN 190 (283)
Q Consensus 148 ~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~ 190 (283)
....+...++...++....++++.|.|.|+-+.-.+.-.|...
T Consensus 50 ~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~ 92 (192)
T PF06057_consen 50 TAADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAA 92 (192)
T ss_pred HHHHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHH
Confidence 3445666677777777889999999999998776666555444
No 163
>PF03283 PAE: Pectinacetylesterase
Probab=69.37 E-value=10 Score=35.61 Aligned_cols=106 Identities=18% Similarity=0.254 Sum_probs=57.4
Q ss_pred HHHHHHHHH-cC-CeEEEEeccChhHHHHHHHhHHhhhhcC-CcceEEEEecCCCC------CCHHHHHHHhccCC-CEE
Q 023358 154 NAVERAKDF-YG-DLNIMVTGHSMGGAMAAFCGLDLTVNLG-IQNVQVMTFGQPRI------GNAAFASYYTQLVP-NTF 223 (283)
Q Consensus 154 ~~l~~~~~~-~~-~~~i~vTGHSLGGalA~l~a~~l~~~~~-~~~v~~~tFg~Prv------gn~~fa~~~~~~~~-~~~ 223 (283)
..|+.++.+ .+ -.+|+|+|-|.||-=|.+.+-+++..++ ..+++++.=+..-+ |...+...+..... ...
T Consensus 142 avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~d~~~~~~~~~~~~~~~~~~~~~~~ 221 (361)
T PF03283_consen 142 AVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFLDNPDYSGNPCIRSFYSDVVGLQNW 221 (361)
T ss_pred HHHHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccccccccCcccchhHHHHHHHHHHHHHh
Confidence 334444444 33 4689999999988777777777777666 34566655444333 44555554443221 011
Q ss_pred EEEECCCccCcCCCCCCCCCCCcceecCceEEEecCC
Q 023358 224 RVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLYHIG 260 (283)
Q Consensus 224 riv~~~D~VP~lP~~~~~~~~~~y~H~g~ev~~~~~~ 260 (283)
+.....+.+...++. =+|++--|.|..+.+++-+..
T Consensus 222 ~~~~p~~C~~~~~~~-C~f~q~~~~~I~tPlFivns~ 257 (361)
T PF03283_consen 222 SKSLPESCVAQYDPE-CFFPQYLYPYIKTPLFIVNSL 257 (361)
T ss_pred hccCCHhHHhccCcc-ccchHHHHhhcCcceeeehhh
Confidence 111222222222222 134445688888999987654
No 164
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=69.28 E-value=10 Score=33.24 Aligned_cols=23 Identities=30% Similarity=0.443 Sum_probs=19.6
Q ss_pred CeEEEEeccChhHHHHHHHhHHh
Q 023358 165 DLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 165 ~~~i~vTGHSLGGalA~l~a~~l 187 (283)
..+|++-|-|||||+|...|.+-
T Consensus 148 ktkivlfGrSlGGAvai~lask~ 170 (300)
T KOG4391|consen 148 KTKIVLFGRSLGGAVAIHLASKN 170 (300)
T ss_pred cceEEEEecccCCeeEEEeeccc
Confidence 46899999999999998777654
No 165
>COG0400 Predicted esterase [General function prediction only]
Probab=67.46 E-value=10 Score=32.74 Aligned_cols=38 Identities=29% Similarity=0.457 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHcC--CeEEEEeccChhHHHHHHHhHHh
Q 023358 150 PAIINAVERAKDFYG--DLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 150 ~~i~~~l~~~~~~~~--~~~i~vTGHSLGGalA~l~a~~l 187 (283)
..+.+.|+.+..++. ..++++.|+|-||++|.-+.+..
T Consensus 81 ~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~ 120 (207)
T COG0400 81 EKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTL 120 (207)
T ss_pred HHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhC
Confidence 345666666666665 47999999999999998777654
No 166
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=66.99 E-value=6.3 Score=35.30 Aligned_cols=23 Identities=30% Similarity=0.433 Sum_probs=20.3
Q ss_pred eEEEEeccChhHHHHHHHhHHhh
Q 023358 166 LNIMVTGHSMGGAMAAFCGLDLT 188 (283)
Q Consensus 166 ~~i~vTGHSLGGalA~l~a~~l~ 188 (283)
.+|-+.|||-||-+|..+++..+
T Consensus 91 s~l~l~GHSrGGk~Af~~al~~~ 113 (259)
T PF12740_consen 91 SKLALAGHSRGGKVAFAMALGNA 113 (259)
T ss_pred cceEEeeeCCCCHHHHHHHhhhc
Confidence 48999999999999999888764
No 167
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=66.89 E-value=27 Score=32.04 Aligned_cols=67 Identities=19% Similarity=0.154 Sum_probs=39.9
Q ss_pred HHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceE-EEEec---CCCCCCHHHHHHHhccCCCEEEEEECC
Q 023358 159 AKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQ-VMTFG---QPRIGNAAFASYYTQLVPNTFRVTNYH 229 (283)
Q Consensus 159 ~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~-~~tFg---~Prvgn~~fa~~~~~~~~~~~riv~~~ 229 (283)
..+.++..+|++.||+.|++++.-+..+ . +...+. ++..+ .++--|..+.+.+.+..-.++-|...+
T Consensus 186 ~~~~~~~~~ivlIg~G~gA~~~~~~la~---~-~~~~~daLV~I~a~~p~~~~n~~l~~~la~l~iPvLDi~~~~ 256 (310)
T PF12048_consen 186 FAQQQGGKNIVLIGHGTGAGWAARYLAE---K-PPPMPDALVLINAYWPQPDRNPALAEQLAQLKIPVLDIYSAD 256 (310)
T ss_pred HHHhcCCceEEEEEeChhHHHHHHHHhc---C-CCcccCeEEEEeCCCCcchhhhhHHHHhhccCCCEEEEecCC
Confidence 4455677789999999999988554432 2 222222 22222 233345778888877655566555443
No 168
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=66.12 E-value=2.3 Score=39.15 Aligned_cols=20 Identities=35% Similarity=0.463 Sum_probs=15.9
Q ss_pred eEEEEeccChhHHHHHHHhH
Q 023358 166 LNIMVTGHSMGGAMAAFCGL 185 (283)
Q Consensus 166 ~~i~vTGHSLGGalA~l~a~ 185 (283)
.++.|.|||.|||-+.....
T Consensus 241 s~~aViGHSFGgAT~i~~ss 260 (399)
T KOG3847|consen 241 SQAAVIGHSFGGATSIASSS 260 (399)
T ss_pred hhhhheeccccchhhhhhhc
Confidence 46899999999997765544
No 169
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=65.97 E-value=9.3 Score=36.54 Aligned_cols=42 Identities=21% Similarity=0.336 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhh
Q 023358 149 RPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVN 190 (283)
Q Consensus 149 ~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~ 190 (283)
.+.+.+++..+++.-...+|-+.||+.||-++..+...++.+
T Consensus 164 ~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k 205 (445)
T COG3243 164 LEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAK 205 (445)
T ss_pred HHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhc
Confidence 455666666666666668999999999999777766665543
No 170
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=65.76 E-value=19 Score=33.63 Aligned_cols=61 Identities=11% Similarity=0.128 Sum_probs=47.1
Q ss_pred hHHHHHHHHHHHHHHcC---CeEEEEeccChhHHHHHHHhHHhhhhcC-----CcceEEEEecCCCCCC
Q 023358 148 IRPAIINAVERAKDFYG---DLNIMVTGHSMGGAMAAFCGLDLTVNLG-----IQNVQVMTFGQPRIGN 208 (283)
Q Consensus 148 ~~~~i~~~l~~~~~~~~---~~~i~vTGHSLGGalA~l~a~~l~~~~~-----~~~v~~~tFg~Prvgn 208 (283)
..+++.+.|+....++| ..+++|+|-|-||-.+..+|..|.+... ..+++-+..|.|-+..
T Consensus 115 ~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 115 AAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred HHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 45677788888888877 4589999999999988888888776632 4567888999988754
No 171
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=63.38 E-value=11 Score=36.44 Aligned_cols=35 Identities=23% Similarity=0.333 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHcC--CeEEEEeccChhHHHHHHHhHH
Q 023358 152 IINAVERAKDFYG--DLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 152 i~~~l~~~~~~~~--~~~i~vTGHSLGGalA~l~a~~ 186 (283)
.++.+++-.+.++ ..+|.+.|||-||.++.++.+.
T Consensus 160 al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~ 196 (493)
T cd00312 160 ALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLS 196 (493)
T ss_pred HHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhC
Confidence 3444554444443 4689999999999988776653
No 172
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=63.26 E-value=11 Score=33.81 Aligned_cols=60 Identities=17% Similarity=0.195 Sum_probs=33.9
Q ss_pred HHHHhccchHHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCC
Q 023358 140 YSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI 206 (283)
Q Consensus 140 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prv 206 (283)
-++|.. .+.+++...|.+-.... ..+-.+.||||||-++.-+-+. .......|.-++|..
T Consensus 113 ~~~f~~-fL~~~lkP~Ie~~y~~~-~~~~~i~GhSlGGLfvl~aLL~-----~p~~F~~y~~~SPSl 172 (264)
T COG2819 113 GDAFRE-FLTEQLKPFIEARYRTN-SERTAIIGHSLGGLFVLFALLT-----YPDCFGRYGLISPSL 172 (264)
T ss_pred hHHHHH-HHHHhhHHHHhcccccC-cccceeeeecchhHHHHHHHhc-----Ccchhceeeeecchh
Confidence 344442 33445555554321111 2348999999999877655442 123456777888865
No 173
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=62.59 E-value=12 Score=32.33 Aligned_cols=57 Identities=16% Similarity=0.200 Sum_probs=36.3
Q ss_pred eEehhhHHHHhccchHHHHHHHHHHHHHHcCCeEEEEeccChhHHH----HHHHhHHhhhhcC
Q 023358 134 MVHHGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGGAM----AAFCGLDLTVNLG 192 (283)
Q Consensus 134 ~vH~Gf~~~~~~~~~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGal----A~l~a~~l~~~~~ 192 (283)
....|+...-. ...+.+.+.|++..++......++.=|||||+. +.+++-.+...++
T Consensus 94 n~~~G~~~~~~--~~~~~~~~~ir~~~e~~d~~~~~~i~~slgGGTGSG~~~~l~~~l~~~y~ 154 (216)
T PF00091_consen 94 NWAVGYYTFGE--EALEEILEQIRKEIEKCDSLDGFFIVHSLGGGTGSGLGPVLAEMLREEYP 154 (216)
T ss_dssp SHHHHHHHHHH--HHHHHHHHHHHHHHHTSTTESEEEEEEESSSSHHHHHHHHHHHHHHHTST
T ss_pred ccccccccccc--ccccccccccchhhccccccccceecccccceeccccccccchhhhcccc
Confidence 34455554322 345667777777776667888999999999975 4444444544443
No 174
>COG5023 Tubulin [Cytoskeleton]
Probab=60.91 E-value=16 Score=34.43 Aligned_cols=71 Identities=18% Similarity=0.303 Sum_probs=44.9
Q ss_pred ehhhHHHHhccchHHHHHHHHHHHHHHcCCeEEEEeccChhHH----HHHHHhHHhhhhcCCcceEEE-EecCCCCCC
Q 023358 136 HHGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGGA----MAAFCGLDLTVNLGIQNVQVM-TFGQPRIGN 208 (283)
Q Consensus 136 H~Gf~~~~~~~~~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGa----lA~l~a~~l~~~~~~~~v~~~-tFg~Prvgn 208 (283)
-+|.|..-. .+.+.+++.|++......+..=...=||+||+ +++++--.|...++.+-+..+ .|=+|++.+
T Consensus 102 A~GhYtvG~--e~~ddvmd~IrreAd~cD~LqGF~l~HS~gGGTGSG~GslLLerl~~eypkK~~~tfSV~P~p~~Sd 177 (443)
T COG5023 102 ARGHYTVGK--EIIDDVMDMIRREADGCDGLQGFLLLHSLGGGTGSGLGSLLLERLREEYPKKIKLTFSVFPAPKVSD 177 (443)
T ss_pred cccccchhH--HHHHHHHHHHHHHhhcCccccceeeeeeccCcCcccHHHHHHHHHHHhcchhheeEEEeccCCccCc
Confidence 345444443 56778888888776655555556667999995 667766666666665444433 334477743
No 175
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=60.81 E-value=17 Score=33.56 Aligned_cols=101 Identities=17% Similarity=0.178 Sum_probs=55.7
Q ss_pred CCCCeEEEEEcCCCcCChHHHHhhccc------cccccCCCCCCCceEehh--hHHHHhccchHHHHHHHHHHHHHHcCC
Q 023358 94 KDLNAIVIAFRGTQEHSIQNWIEDLFW------KQLDINYPGMSDAMVHHG--FYSAYHNTTIRPAIINAVERAKDFYGD 165 (283)
Q Consensus 94 ~~~~~ivVafRGT~~~s~~d~~~Dl~~------~~~~~~~~~~~~~~vH~G--f~~~~~~~~~~~~i~~~l~~~~~~~~~ 165 (283)
++.+-+|+-.-|.-. +.-+|--.+.. ..+-.++.+......+.. .+.. ..+...+..+......
T Consensus 41 ~~~gP~illlHGfPe-~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~-------~~l~~di~~lld~Lg~ 112 (322)
T KOG4178|consen 41 PGDGPIVLLLHGFPE-SWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTI-------DELVGDIVALLDHLGL 112 (322)
T ss_pred CCCCCEEEEEccCCc-cchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeH-------HHHHHHHHHHHHHhcc
Confidence 456778888999863 56677655431 112222333222222222 2222 2233334444444557
Q ss_pred eEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCC
Q 023358 166 LNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI 206 (283)
Q Consensus 166 ~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prv 206 (283)
.++.+.||+.||-+|.-+++..... .-..++-..|..
T Consensus 113 ~k~~lvgHDwGaivaw~la~~~Per----v~~lv~~nv~~~ 149 (322)
T KOG4178|consen 113 KKAFLVGHDWGAIVAWRLALFYPER----VDGLVTLNVPFP 149 (322)
T ss_pred ceeEEEeccchhHHHHHHHHhChhh----cceEEEecCCCC
Confidence 8999999999999999888865433 223444444443
No 176
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=59.64 E-value=17 Score=34.71 Aligned_cols=62 Identities=23% Similarity=0.273 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHc---CCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCCCCHHHHHHHh
Q 023358 151 AIINAVERAKDFY---GDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFASYYT 216 (283)
Q Consensus 151 ~i~~~l~~~~~~~---~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prvgn~~fa~~~~ 216 (283)
++...++.++.++ ++.++++.|-|.||+||+.+-+ ++|.--.-.+.=++|----.+|.+|++
T Consensus 95 D~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~----kyP~~~~ga~ASSapv~a~~df~~y~~ 159 (434)
T PF05577_consen 95 DLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRL----KYPHLFDGAWASSAPVQAKVDFWEYFE 159 (434)
T ss_dssp HHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHH----H-TTT-SEEEEET--CCHCCTTTHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHh----hCCCeeEEEEeccceeeeecccHHHHH
Confidence 3444445555443 4679999999999999966544 445444466776677553333434333
No 177
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=59.29 E-value=23 Score=33.85 Aligned_cols=39 Identities=13% Similarity=0.002 Sum_probs=28.8
Q ss_pred eEEEEeccChhHHHHHHHhHHhhhhcCCcce-EEEEecCC
Q 023358 166 LNIMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQP 204 (283)
Q Consensus 166 ~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v-~~~tFg~P 204 (283)
.++.+.|.++||-++..++..++.......+ .++.+|+|
T Consensus 168 ~~v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~P 207 (406)
T TIGR01849 168 PDIHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGP 207 (406)
T ss_pred CCCcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecC
Confidence 3499999999999999888877665322234 45667776
No 178
>PLN02633 palmitoyl protein thioesterase family protein
Probab=58.84 E-value=26 Score=32.23 Aligned_cols=37 Identities=19% Similarity=0.152 Sum_probs=26.2
Q ss_pred EEEEeccChhHHHHHHHhHHhhhhcCC-cce-EEEEecCCCCC
Q 023358 167 NIMVTGHSMGGAMAAFCGLDLTVNLGI-QNV-QVMTFGQPRIG 207 (283)
Q Consensus 167 ~i~vTGHSLGGalA~l~a~~l~~~~~~-~~v-~~~tFg~Prvg 207 (283)
-+.+.|||.||-++--..- ..+. ++| ..+|||+|-.|
T Consensus 95 G~naIGfSQGGlflRa~ie----rc~~~p~V~nlISlggph~G 133 (314)
T PLN02633 95 GYNIVGRSQGNLVARGLIE----FCDGGPPVYNYISLAGPHAG 133 (314)
T ss_pred cEEEEEEccchHHHHHHHH----HCCCCCCcceEEEecCCCCC
Confidence 4889999999987754443 3333 344 68999998765
No 179
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=58.82 E-value=13 Score=32.65 Aligned_cols=36 Identities=25% Similarity=0.264 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHcC---CeEEEEeccChhHHHHHHHhHH
Q 023358 150 PAIINAVERAKDFYG---DLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 150 ~~i~~~l~~~~~~~~---~~~i~vTGHSLGGalA~l~a~~ 186 (283)
..+...+..+. ..+ ..+|-++|.|+||.+|.+++..
T Consensus 94 ~d~~a~~~~L~-~~~~~~~~~ig~~GfC~GG~~a~~~a~~ 132 (236)
T COG0412 94 ADIDAALDYLA-RQPQVDPKRIGVVGFCMGGGLALLAATR 132 (236)
T ss_pred HHHHHHHHHHH-hCCCCCCceEEEEEEcccHHHHHHhhcc
Confidence 34444444333 334 5789999999999999998874
No 180
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=57.36 E-value=53 Score=30.57 Aligned_cols=41 Identities=20% Similarity=-0.022 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHc-CCeEEEEeccChhHHHHHHHhHHhhh
Q 023358 149 RPAIINAVERAKDFY-GDLNIMVTGHSMGGAMAAFCGLDLTV 189 (283)
Q Consensus 149 ~~~i~~~l~~~~~~~-~~~~i~vTGHSLGGalA~l~a~~l~~ 189 (283)
...+.++..=+...| |+.+|+.-|.|-|+-.|-.+|.++..
T Consensus 104 ~~nI~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagmir~ 145 (423)
T COG3673 104 VQNIREAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGMIRH 145 (423)
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHHHHH
Confidence 344544444444444 78899999999999999888877643
No 181
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=56.99 E-value=26 Score=35.12 Aligned_cols=24 Identities=46% Similarity=0.505 Sum_probs=19.5
Q ss_pred CeEEEEeccChhHHHHHHHhHHhh
Q 023358 165 DLNIMVTGHSMGGAMAAFCGLDLT 188 (283)
Q Consensus 165 ~~~i~vTGHSLGGalA~l~a~~l~ 188 (283)
+..|+..|||+||-+|-.+-++..
T Consensus 525 ~RPivwI~HSmGGLl~K~lLlda~ 548 (697)
T KOG2029|consen 525 DRPIVWIGHSMGGLLAKKLLLDAY 548 (697)
T ss_pred CCceEEEecccchHHHHHHHHHHh
Confidence 678999999999988877666544
No 182
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=56.43 E-value=22 Score=30.64 Aligned_cols=26 Identities=31% Similarity=0.438 Sum_probs=22.1
Q ss_pred CCeEEEEeccChhHHHHHHHhHHhhh
Q 023358 164 GDLNIMVTGHSMGGAMAAFCGLDLTV 189 (283)
Q Consensus 164 ~~~~i~vTGHSLGGalA~l~a~~l~~ 189 (283)
+..+|.+-|-|+|||+|.++++.+..
T Consensus 91 ~~~rI~igGfs~G~a~aL~~~~~~~~ 116 (206)
T KOG2112|consen 91 PSNRIGIGGFSQGGALALYSALTYPK 116 (206)
T ss_pred CccceeEcccCchHHHHHHHHhcccc
Confidence 35679999999999999999987633
No 183
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=56.20 E-value=14 Score=35.00 Aligned_cols=68 Identities=19% Similarity=0.194 Sum_probs=35.7
Q ss_pred CeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCCCCHHHHHH---------------HhccCCCEEEEEECC
Q 023358 165 DLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFASY---------------YTQLVPNTFRVTNYH 229 (283)
Q Consensus 165 ~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prvgn~~fa~~---------------~~~~~~~~~riv~~~ 229 (283)
..+|-++|+|+||..|.++|+. ...|++...++=-....+-+.. +-..+|.++|...--
T Consensus 225 ~~RIG~~GfSmGg~~a~~LaAL------DdRIka~v~~~~l~~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~r~~D~P 298 (390)
T PF12715_consen 225 PDRIGCMGFSMGGYRAWWLAAL------DDRIKATVANGYLCTTQERALLMTMPNNNGLRGFPNCICNYIPGLWRYFDFP 298 (390)
T ss_dssp EEEEEEEEEGGGHHHHHHHHHH-------TT--EEEEES-B--HHHHHHHB----TTS----SS-GGG--TTCCCC--HH
T ss_pred ccceEEEeecccHHHHHHHHHc------chhhHhHhhhhhhhccchhhHhhccccccccCcCcchhhhhCccHHhhCccH
Confidence 4689999999999999888763 2456555444332222221111 112345556666666
Q ss_pred CccCcCCCC
Q 023358 230 DIVPHLPPY 238 (283)
Q Consensus 230 D~VP~lP~~ 238 (283)
|++.-+-|.
T Consensus 299 dIasliAPR 307 (390)
T PF12715_consen 299 DIASLIAPR 307 (390)
T ss_dssp HHHHTTTTS
T ss_pred HHHHHhCCC
Confidence 666666665
No 184
>PRK09810 entericidin A; Provisional
Probab=55.92 E-value=12 Score=23.67 Aligned_cols=18 Identities=17% Similarity=0.523 Sum_probs=11.7
Q ss_pred chhHHHHHHHHHHHHhhc
Q 023358 3 QKKWLILLVFMCLFTFSC 20 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~ 20 (283)
|||++++++++++++..+
T Consensus 2 Mkk~~~l~~~~~~~L~aC 19 (41)
T PRK09810 2 MKRLIVLVLLASTLLTGC 19 (41)
T ss_pred hHHHHHHHHHHHHHHhhh
Confidence 788888776666554443
No 185
>COG4099 Predicted peptidase [General function prediction only]
Probab=55.53 E-value=42 Score=30.91 Aligned_cols=36 Identities=22% Similarity=0.137 Sum_probs=23.8
Q ss_pred HHHHHHH-HHHHHcC--CeEEEEeccChhHHHHHHHhHH
Q 023358 151 AIINAVE-RAKDFYG--DLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 151 ~i~~~l~-~~~~~~~--~~~i~vTGHSLGGalA~l~a~~ 186 (283)
...+.+. .+.+.|. ..+|++||-|.||-.+..++..
T Consensus 251 ~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~k 289 (387)
T COG4099 251 EKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEK 289 (387)
T ss_pred HHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHh
Confidence 3444554 3334443 5789999999999877666654
No 186
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=55.18 E-value=32 Score=32.48 Aligned_cols=39 Identities=23% Similarity=0.290 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhh
Q 023358 151 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTV 189 (283)
Q Consensus 151 ~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~ 189 (283)
++.+..+.+.+..+..+|++.|-|.||.||.-...++..
T Consensus 180 qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~ 218 (374)
T PF10340_consen 180 QLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKK 218 (374)
T ss_pred HHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhh
Confidence 444555666655677899999999999998887777765
No 187
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=54.76 E-value=8.4 Score=34.72 Aligned_cols=24 Identities=29% Similarity=0.375 Sum_probs=20.4
Q ss_pred CeEEEEeccChhHHHHHHHhHHhh
Q 023358 165 DLNIMVTGHSMGGAMAAFCGLDLT 188 (283)
Q Consensus 165 ~~~i~vTGHSLGGalA~l~a~~l~ 188 (283)
-.++.+.|||.||-.|-.+|+..+
T Consensus 119 l~klal~GHSrGGktAFAlALg~a 142 (307)
T PF07224_consen 119 LSKLALSGHSRGGKTAFALALGYA 142 (307)
T ss_pred cceEEEeecCCccHHHHHHHhccc
Confidence 468999999999998888887665
No 188
>PLN02606 palmitoyl-protein thioesterase
Probab=53.79 E-value=35 Score=31.29 Aligned_cols=37 Identities=19% Similarity=0.157 Sum_probs=25.9
Q ss_pred EEEEeccChhHHHHHHHhHHhhhhcCC-cce-EEEEecCCCCC
Q 023358 167 NIMVTGHSMGGAMAAFCGLDLTVNLGI-QNV-QVMTFGQPRIG 207 (283)
Q Consensus 167 ~i~vTGHSLGGalA~l~a~~l~~~~~~-~~v-~~~tFg~Prvg 207 (283)
-+-+.|+|.||-++--..- ..+. ++| ..+|||+|-.|
T Consensus 96 G~naIGfSQGglflRa~ie----rc~~~p~V~nlISlggph~G 134 (306)
T PLN02606 96 GYNIVAESQGNLVARGLIE----FCDNAPPVINYVSLGGPHAG 134 (306)
T ss_pred ceEEEEEcchhHHHHHHHH----HCCCCCCcceEEEecCCcCC
Confidence 4788999999977644443 3333 344 68999998765
No 189
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=53.52 E-value=1.5e+02 Score=26.93 Aligned_cols=81 Identities=12% Similarity=0.008 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHcC---CeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCCCCHHHHHHHhccC---------
Q 023358 152 IINAVERAKDFYG---DLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFASYYTQLV--------- 219 (283)
Q Consensus 152 i~~~l~~~~~~~~---~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prvgn~~fa~~~~~~~--------- 219 (283)
+.+++.......| .-||++.|-|||+--+.-+--.+... ...+.-.-|..|+-++..+.+..++.-
T Consensus 92 L~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~--~~~vdGalw~GpP~~s~~w~~~t~~RdpGSpe~~Pv 169 (289)
T PF10081_consen 92 LFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDL--RDRVDGALWVGPPFFSPLWRELTDRRDPGSPEWLPV 169 (289)
T ss_pred HHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHh--hhhcceEEEeCCCCCChhHHHhccCCCCCCCcccce
Confidence 3444433333434 45899999999875443332222221 134666677777777887776665432
Q ss_pred ---CCEEEEEECCCccCc
Q 023358 220 ---PNTFRVTNYHDIVPH 234 (283)
Q Consensus 220 ---~~~~riv~~~D~VP~ 234 (283)
+...|+.+..+-+.+
T Consensus 170 ~~~G~~VRFa~~~~~l~~ 187 (289)
T PF10081_consen 170 YDDGRHVRFANDPADLAR 187 (289)
T ss_pred ecCCceEEEeCCcccccC
Confidence 145666666555554
No 190
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=53.13 E-value=48 Score=30.02 Aligned_cols=37 Identities=22% Similarity=0.358 Sum_probs=23.0
Q ss_pred EEEEeccChhHHHHHHHhHHhhhhcCCcce-EEEEecCCCCC
Q 023358 167 NIMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQPRIG 207 (283)
Q Consensus 167 ~i~vTGHSLGGalA~l~a~~l~~~~~~~~v-~~~tFg~Prvg 207 (283)
-+...|+|.||-+.--+.- ..+..+| ..+|||+|-.|
T Consensus 81 G~~~IGfSQGgl~lRa~vq----~c~~~~V~nlISlggph~G 118 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQ----RCNDPPVHNLISLGGPHMG 118 (279)
T ss_dssp -EEEEEETCHHHHHHHHHH----H-TSS-EEEEEEES--TT-
T ss_pred ceeeeeeccccHHHHHHHH----HCCCCCceeEEEecCcccc
Confidence 5899999999977654443 3344455 68999998774
No 191
>cd02189 delta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. Delta-tubulin plays an essential role in forming the triplet microtubules of centrioles and basal bodies.
Probab=52.38 E-value=28 Score=33.71 Aligned_cols=48 Identities=13% Similarity=0.173 Sum_probs=35.9
Q ss_pred chHHHHHHHHHHHHHHcCCeEEEEeccChhH----HHHHHHhHHhhhhcCCc
Q 023358 147 TIRPAIINAVERAKDFYGDLNIMVTGHSMGG----AMAAFCGLDLTVNLGIQ 194 (283)
Q Consensus 147 ~~~~~i~~~l~~~~~~~~~~~i~vTGHSLGG----alA~l~a~~l~~~~~~~ 194 (283)
.+.+++++.|++..++.....-++.=||||| ++++.+.-.|...++..
T Consensus 107 ~~~~~~~d~ir~~~E~cd~~~gf~~~~sl~GGtGSG~gs~l~e~l~d~y~~~ 158 (446)
T cd02189 107 QIKEDILDLIRKEVEKCDSFEGFLVLHSLAGGTGSGLGSRVTELLRDEYPES 158 (446)
T ss_pred hhHHHHHHHHHHHHHhCCCccceEEEecCCCCcchHHHHHHHHHHHHhcCcc
Confidence 4678888889888888877777888899998 46666666666665543
No 192
>PF03032 Brevenin: Brevenin/esculentin/gaegurin/rugosin family; InterPro: IPR004275 In addition to the highly specific cell-mediated immune system, vertebrates possess an efficient host-defence mechanism against invading microorganisms which involves the synthesis of highly potent antimicrobial peptides with a large spectrum of activity. This entry represents a number of these defence peptides secreted from the skin of amphibians, including the opiate-like dermorphins and deltorphins, and the antimicrobial dermoseptins and temporins.; GO: 0006952 defense response, 0042742 defense response to bacterium, 0005576 extracellular region
Probab=49.73 E-value=9.9 Score=24.64 Aligned_cols=21 Identities=43% Similarity=0.716 Sum_probs=15.9
Q ss_pred chhHHHHHHHHHHHHhh-cccc
Q 023358 3 QKKWLILLVFMCLFTFS-CARE 23 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~~-~~~~ 23 (283)
|||-|+|++++-++.++ +++.
T Consensus 3 lKKsllLlfflG~ISlSlCeeE 24 (46)
T PF03032_consen 3 LKKSLLLLFFLGTISLSLCEEE 24 (46)
T ss_pred chHHHHHHHHHHHcccchHHHh
Confidence 78888888888877776 5554
No 193
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=49.52 E-value=8.5 Score=19.73 Aligned_cols=14 Identities=36% Similarity=0.596 Sum_probs=6.9
Q ss_pred hhHHHHHHHHHHHH
Q 023358 4 KKWLILLVFMCLFT 17 (283)
Q Consensus 4 ~~~~~~~~~~~~~~ 17 (283)
-|+.|.+++.++..
T Consensus 2 Mk~vIIlvvLLliS 15 (19)
T PF13956_consen 2 MKLVIILVVLLLIS 15 (19)
T ss_pred ceehHHHHHHHhcc
Confidence 35555555544443
No 194
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=49.17 E-value=24 Score=34.05 Aligned_cols=35 Identities=23% Similarity=0.298 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHcC--CeEEEEeccChhHHHHHHHhHH
Q 023358 152 IINAVERAKDFYG--DLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 152 i~~~l~~~~~~~~--~~~i~vTGHSLGGalA~l~a~~ 186 (283)
.++-|++-.+.++ ..+|++.|||-||+.+.+..+.
T Consensus 192 AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s 228 (535)
T PF00135_consen 192 ALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLS 228 (535)
T ss_dssp HHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHG
T ss_pred HHHHHHhhhhhcccCCcceeeeeecccccccceeeec
Confidence 3455555555665 3689999999999877665543
No 195
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=48.90 E-value=25 Score=34.49 Aligned_cols=32 Identities=28% Similarity=0.384 Sum_probs=22.5
Q ss_pred HHHHHHHHHcC--CeEEEEeccChhHHHHHHHhH
Q 023358 154 NAVERAKDFYG--DLNIMVTGHSMGGAMAAFCGL 185 (283)
Q Consensus 154 ~~l~~~~~~~~--~~~i~vTGHSLGGalA~l~a~ 185 (283)
+.+++-...++ ..+|.+.|||.||+.+.++.+
T Consensus 181 ~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~ 214 (545)
T KOG1516|consen 181 RWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTL 214 (545)
T ss_pred HHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhc
Confidence 33443334443 468999999999999987665
No 196
>PF10614 CsgF: Type VIII secretion system (T8SS), CsgF protein; InterPro: IPR018893 Fimbriae are cell-surface protein polymers, of e.g. Escherichia coli and Salmonella spp, that mediate interactions important for host and environmental persistence, development of biofilms, motility, colonisation and invasion of cells, and conjugation. Four general assembly pathways for different fimbriae have been proposed, one of which is extracellular nucleation-precipitation (ENP), that differs from the others in that fibre-growth occurs extracellularly. Thin aggregative fimbriae (Tafi) are the only fimbriae dependent on the ENP pathway. Tafi were first identified in Salmonella spp. and the controlling operon termed agf; however subsequent isolation of the homologous operon in E. coli led to its being called csg. Tafi are known as curli because, in the absence of extracellular polysaccharides, their morphology appears curled; however, when expressed with such polysaccharides their morphology appears as a tangled amorphous matrix []. CsgF is one of three putative curli assembly factors appearing to act as a nucleator protein. Unlike eukaryotic amyloid formation, curli biogenesis is a productive pathway requiring a specific assembly machinery [].
Probab=48.11 E-value=15 Score=29.78 Aligned_cols=47 Identities=23% Similarity=0.104 Sum_probs=37.2
Q ss_pred chhHHHHHHHHHHHHhh--cccchhhccCCCCccCCHHHHHHHHHHHHH
Q 023358 3 QKKWLILLVFMCLFTFS--CARELRVKRHHSPQVYNHTLATILVEYASA 49 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~y~~~~a~~l~~~a~a 49 (283)
||+.+++++++++++.. ..+++-++--+|+.+=|+-...+|+.=|.|
T Consensus 1 mk~~~l~a~l~~~~~~~~a~A~eLVY~PvNPsFGGnplNgs~LL~~A~A 49 (142)
T PF10614_consen 1 MKYRGLLALLLLLLAASSAQAQELVYTPVNPSFGGNPLNGSWLLSSAQA 49 (142)
T ss_pred CcEeHHHHHHHHHHcccccchhheEeeccCCCCCCCcccHHHHhhhhhh
Confidence 78888888877776543 477788888999999999888888866655
No 197
>PRK10350 hypothetical protein; Provisional
Probab=47.45 E-value=15 Score=29.07 Aligned_cols=37 Identities=14% Similarity=0.192 Sum_probs=21.9
Q ss_pred chhHHHHHHHHHHHHhhcccchhhccCCCCccC-CHHHHH
Q 023358 3 QKKWLILLVFMCLFTFSCARELRVKRHHSPQVY-NHTLAT 41 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y-~~~~a~ 41 (283)
||+||||++|+-|-. ..+-|..-...-.-+| .++--|
T Consensus 1 MKr~L~~~allP~~~--~AqplN~~NNPnqpGY~ipSQQR 38 (145)
T PRK10350 1 MKRLLLLTALLPFVG--FAQPINTLNNPNQPGYQIPSQQR 38 (145)
T ss_pred ChhHHHHHHHhHHHH--HHhhhhccCCCCCCCCcCcHHHH
Confidence 799997766554433 3455666665555667 444433
No 198
>PF08139 LPAM_1: Prokaryotic membrane lipoprotein lipid attachment site; InterPro: IPR012640 In prokaryotes, membrane lipoproteins are synthesized with a precursor signal peptide, which is cleaved by a specific lipoprotein signal peptidase (signal peptidase II). The peptidase recognises a conserved sequence and cuts upstream of a cysteine residue to which a glyceride-fatty acid lipid is attached [,]. This lipid attachment site is found in homologues of the VirB proteins of type IV secretion systems (T4SS). Conjugal transfer across the cell envelope of Gram-negative bacteria is mediated by a supramolecular structure termed mating pair formation (Mpf) complex. Collectively, secretion pathways ancestrally related to bacterial conjugation systems are now known as T4SS. T4SS are involved in the delivery of effector molecules to eukaryotic target cells; each of these systems exports distinct DNA or protein substrates to effect a myriad of changes in host cell physiology during infection [].
Probab=46.40 E-value=20 Score=20.09 Aligned_cols=14 Identities=29% Similarity=0.396 Sum_probs=8.2
Q ss_pred chhHHHHHHHHHHH
Q 023358 3 QKKWLILLVFMCLF 16 (283)
Q Consensus 3 ~~~~~~~~~~~~~~ 16 (283)
|||+|++++.+..+
T Consensus 7 mKkil~~l~a~~~L 20 (25)
T PF08139_consen 7 MKKILFPLLALFML 20 (25)
T ss_pred HHHHHHHHHHHHHH
Confidence 47877665554443
No 199
>PF01713 Smr: Smr domain; InterPro: IPR002625 This family includes the Smr (Small MutS Related) proteins, and the C-terminal region of the MutS2 protein. It has been suggested that this domain interacts with the MutS1 (P23909 from SWISSPROT) protein in the case of Smr proteins and with the N-terminal MutS related region of MutS2, P94545 from SWISSPROT [].; PDB: 3QD7_X 2D9I_A 3FAU_A 2VKC_A 2ZQE_A.
Probab=44.90 E-value=1e+02 Score=21.82 Aligned_cols=58 Identities=22% Similarity=0.202 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHcCCeEEEEec---cChhHHHHHHHhHHhhhhcCCcceEEEEecCCCCCC
Q 023358 151 AIINAVERAKDFYGDLNIMVTG---HSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGN 208 (283)
Q Consensus 151 ~i~~~l~~~~~~~~~~~i~vTG---HSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prvgn 208 (283)
.+.+.|..+.+..-..=.++|| ||.+|.|-...--+|........+.-+.-+.|.-|+
T Consensus 14 ~l~~~l~~~~~~~~~~~~II~G~G~hS~~g~Lk~~V~~~L~~~~~~~~v~~~~~~~~~~g~ 74 (83)
T PF01713_consen 14 ALEEFLDEARQRGIRELRIITGKGNHSKGGVLKRAVRRWLEEGYQYEEVLAYRDAEPEDGN 74 (83)
T ss_dssp HHHHHHHHHHHTTHSEEEEE--STCTCCTSHHHHHHHHHHHHTHCCTTEEEEEE--CCCTG
T ss_pred HHHHHHHHHHHcCCCEEEEEeccCCCCCCCcHHHHHHHHHHhhhccchhheeeecCCCCCC
Confidence 4445555544333244457887 678888777776666553445567777777776655
No 200
>PF02402 Lysis_col: Lysis protein; InterPro: IPR003059 The DNA sequence of the entire colicin E2 operon has been determined []. The operon comprises the colicin activity gene (ceaB), the colicin immunity gene (ceiB) and the lysis gene (celB), which is essential for colicin release from producing cells []. A putative LexA binding site is located upstream from ceaB, and a rho-independent terminator structure is located downstream from celB []. Comparison of the amino acid sequences of colicin E2 and cloacin DF13 reveal extensive similarity. These colicins have different modes of action and recognise different cell surface receptors; the two major regions of heterology at the C terminus, and in the C-terminal end of the central region are thought to correspond to the catalytic and receptor-recognition domains, respectively []. Sequence similarities between colicins E2, A and E1 [] are less striking. The colicin E2 (pyocin) immunity protein does not share similarity with either the colicin E3 or cloacin DF13 [] immunity proteins. By contrast, the lysis proteins of the ColE2, ColE1 and CloDF13 plasmids are almost identical except in the N-terminal regions, which themselves are similar to lipoprotein signal peptides []. Processing of the ColE2 prolysis protein to the mature form is prevented by globomycin, a specific inhibitor of the lipoprotein signal peptidase []. The mature ColE2 lysis protein is located in the cell envelope [].; GO: 0009405 pathogenesis, 0019835 cytolysis, 0019867 outer membrane
Probab=44.84 E-value=6.3 Score=25.13 Aligned_cols=25 Identities=12% Similarity=0.305 Sum_probs=16.6
Q ss_pred chhHHHHHHHHHHHHhhcccchhhc
Q 023358 3 QKKWLILLVFMCLFTFSCARELRVK 27 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~ 27 (283)
|||++++.+++..+++++=|+=.++
T Consensus 1 MkKi~~~~i~~~~~~L~aCQaN~iR 25 (46)
T PF02402_consen 1 MKKIIFIGIFLLTMLLAACQANYIR 25 (46)
T ss_pred CcEEEEeHHHHHHHHHHHhhhccee
Confidence 6788777777766677766663333
No 201
>PF10956 DUF2756: Protein of unknown function (DUF2756); InterPro: IPR020158 This entry contains proteins with no known function.
Probab=44.76 E-value=41 Score=25.48 Aligned_cols=39 Identities=18% Similarity=0.250 Sum_probs=23.3
Q ss_pred chhHHHHHHHHHHHHhhcccchhhccCCCCccC-CHHHHHHH
Q 023358 3 QKKWLILLVFMCLFTFSCARELRVKRHHSPQVY-NHTLATIL 43 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y-~~~~a~~l 43 (283)
||+||+|++++-|...+ +.+......-.-+| +++--|..
T Consensus 1 MK~ll~laalLPl~~~A--qp~n~~nnpnqpgy~~PSQQRMQ 40 (104)
T PF10956_consen 1 MKRLLILAALLPLAAMA--QPLNTTNNPNQPGYVIPSQQRMQ 40 (104)
T ss_pred ChHHHHHHHHccHHHHH--hHhhcCCCcCCCCCCCcHHHHHH
Confidence 78888877766665544 55555555555556 55544443
No 202
>PRK13883 conjugal transfer protein TrbH; Provisional
Probab=44.75 E-value=32 Score=28.16 Aligned_cols=48 Identities=17% Similarity=0.133 Sum_probs=32.3
Q ss_pred chhHHHHHHHHHHHHhhc--ccchhhccCCCCccCCHHHHHHHHHHHHHhcCC
Q 023358 3 QKKWLILLVFMCLFTFSC--ARELRVKRHHSPQVYNHTLATILVEYASAVYMS 53 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~y~~~~a~~l~~~a~aaY~~ 53 (283)
|||+|++++++++|..-+ ...-.+ +.+...+..+|..++..-...|-.
T Consensus 1 Mrk~l~~~~l~l~LaGCAt~~~gnf~---~~s~~~a~~iA~D~v~qL~~~ypP 50 (151)
T PRK13883 1 MRKIVLLALLALALGGCATSQYGNFV---QASAADQQKLATDAVQQLATLYPP 50 (151)
T ss_pred ChhHHHHHHHHHHHhcccCCCCCccc---ccCHHHHHHHHHHHHHHHHHhCCC
Confidence 899999988877765532 122222 567777788888877666666754
No 203
>TIGR02802 Pal_lipo peptidoglycan-associated lipoprotein. Members of this protein are Pal (also called OprL), the Peptidoglycan-Associated Lipoprotein of the Tol-Pal system. The system appears to be involved both in the maintenance of outer membrane integrity and in the import of certain organic molecules as nutrients. Members of this family contain a hydrodrophobic lipoprotein signal sequence, a conserved N-terminal cleavage and modification site, a poorly conserved low-complexity region, together comprising about 65 amino acids, and a well-conserved C-terminal domain. The seed alignment for this model includes only the conserved C-terminal domain.
Probab=44.67 E-value=93 Score=23.03 Aligned_cols=53 Identities=15% Similarity=0.266 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHcCCeEEEEeccC--hhHHH---------HHHHhHHhhhh-cCCcceEEEEecCC
Q 023358 152 IINAVERAKDFYGDLNIMVTGHS--MGGAM---------AAFCGLDLTVN-LGIQNVQVMTFGQP 204 (283)
Q Consensus 152 i~~~l~~~~~~~~~~~i~vTGHS--LGGal---------A~l~a~~l~~~-~~~~~v~~~tFg~P 204 (283)
.++.+...++++|++.|.|.||+ .|..- |....-.|... .+...+.+..||.-
T Consensus 18 ~L~~~a~~l~~~~~~~i~I~Ghtd~~g~~~~N~~LS~~RA~~V~~~L~~~gi~~~ri~~~g~G~~ 82 (104)
T TIGR02802 18 ILDAHAAYLKKNPSVRVTIEGHTDERGTREYNLALGERRANAVKDYLQAKGVSASQIETVSYGEE 82 (104)
T ss_pred HHHHHHHHHHHCCCcEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHeEEEeeccc
Confidence 34445555667889999999998 33321 22222222221 12456778888863
No 204
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=44.37 E-value=39 Score=32.54 Aligned_cols=57 Identities=14% Similarity=0.098 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHcCC---eEEEEeccChhHHHHHHHhHHhhhhc-----CCcceEEEEecCCCC
Q 023358 150 PAIINAVERAKDFYGD---LNIMVTGHSMGGAMAAFCGLDLTVNL-----GIQNVQVMTFGQPRI 206 (283)
Q Consensus 150 ~~i~~~l~~~~~~~~~---~~i~vTGHSLGGalA~l~a~~l~~~~-----~~~~v~~~tFg~Prv 206 (283)
+++.+.|+...+++|. .+++++|.|-||-.+-.+|..+.+.. ..-+++-+..|.|-+
T Consensus 146 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t 210 (433)
T PLN03016 146 KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVT 210 (433)
T ss_pred HHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCc
Confidence 4566777777777774 57999999999987766676665431 123567777787754
No 205
>COG2143 Thioredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=43.51 E-value=18 Score=29.95 Aligned_cols=21 Identities=29% Similarity=0.608 Sum_probs=17.6
Q ss_pred chhHHHHHHHHHHHHhhcccc
Q 023358 3 QKKWLILLVFMCLFTFSCARE 23 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~ 23 (283)
||.++|+|+++++|++++...
T Consensus 2 mRvl~i~Lliis~fl~a~~s~ 22 (182)
T COG2143 2 MRVLLIVLLIISLFLSACKSN 22 (182)
T ss_pred cchHHHHHHHHHHHHHHHhCC
Confidence 799999999999999986433
No 206
>PF12099 DUF3575: Protein of unknown function (DUF3575); InterPro: IPR021958 This family of proteins are functionally uncharacterised. This family is only found in bacteria. Proteins in this family are typically between 187 to 236 amino acids in length.
Probab=43.32 E-value=13 Score=31.63 Aligned_cols=17 Identities=35% Similarity=0.434 Sum_probs=11.2
Q ss_pred chhHHHHHHHHHHHHhh
Q 023358 3 QKKWLILLVFMCLFTFS 19 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~~ 19 (283)
|||+++++++++++...
T Consensus 1 ~~~~~~~~~~~~~~~~~ 17 (189)
T PF12099_consen 1 MKKIRILFLLLLLFCSL 17 (189)
T ss_pred CceehHHHHHHHHHHHh
Confidence 78887776666655553
No 207
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=43.28 E-value=20 Score=33.62 Aligned_cols=18 Identities=39% Similarity=0.451 Sum_probs=14.9
Q ss_pred CeEEEEeccChhHHHHHH
Q 023358 165 DLNIMVTGHSMGGAMAAF 182 (283)
Q Consensus 165 ~~~i~vTGHSLGGalA~l 182 (283)
..+|-+.|||+||.-+..
T Consensus 158 ~~~Vgv~GhS~GG~T~m~ 175 (365)
T COG4188 158 PQRVGVLGHSFGGYTAME 175 (365)
T ss_pred ccceEEEecccccHHHHH
Confidence 478999999999976544
No 208
>COG5510 Predicted small secreted protein [Function unknown]
Probab=43.05 E-value=25 Score=22.44 Aligned_cols=17 Identities=35% Similarity=0.426 Sum_probs=9.7
Q ss_pred chh--HHHHHHHHHHHHhh
Q 023358 3 QKK--WLILLVFMCLFTFS 19 (283)
Q Consensus 3 ~~~--~~~~~~~~~~~~~~ 19 (283)
||+ +||++++++.++++
T Consensus 2 mk~t~l~i~~vll~s~lla 20 (44)
T COG5510 2 MKKTILLIALVLLASTLLA 20 (44)
T ss_pred chHHHHHHHHHHHHHHHHH
Confidence 555 55666666555553
No 209
>PRK10802 peptidoglycan-associated outer membrane lipoprotein; Provisional
Probab=42.76 E-value=88 Score=26.08 Aligned_cols=58 Identities=16% Similarity=0.327 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHcCCeEEEEeccC-----------hhHHHHHHHhHHhhhh-cCCcceEEEEecC--CCCCC
Q 023358 151 AIINAVERAKDFYGDLNIMVTGHS-----------MGGAMAAFCGLDLTVN-LGIQNVQVMTFGQ--PRIGN 208 (283)
Q Consensus 151 ~i~~~l~~~~~~~~~~~i~vTGHS-----------LGGalA~l~a~~l~~~-~~~~~v~~~tFg~--Prvgn 208 (283)
++++.+...++.+|+.+|.|.||. |+-.-|.-..-+|... .+..++.++.||. |-..+
T Consensus 86 ~~L~~~a~~L~~~p~~~v~I~GhtD~~Gs~~yN~~LS~~RA~aV~~~L~~~Gv~~~ri~~~g~Ge~~P~~~~ 157 (173)
T PRK10802 86 QMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIALGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLG 157 (173)
T ss_pred HHHHHHHHHHHhCCCceEEEEEecCCCCChHHHHHHHHHHHHHHHHHHHHcCCCHHHeEEEEecCCCcCCCC
Confidence 344555566677898999999997 4444444444444432 2345788999997 54443
No 210
>PRK03482 phosphoglycerate mutase; Provisional
Probab=42.15 E-value=55 Score=27.80 Aligned_cols=38 Identities=16% Similarity=0.214 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHh
Q 023358 148 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 148 ~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l 187 (283)
+...+...++++.+.+++.+|+|++| ||.+..+.+..+
T Consensus 125 ~~~Rv~~~l~~~~~~~~~~~vliVsH--g~~i~~l~~~l~ 162 (215)
T PRK03482 125 LSDRMHAALESCLELPQGSRPLLVSH--GIALGCLVSTIL 162 (215)
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEeC--cHHHHHHHHHHh
Confidence 34556666666666666678999999 688877766544
No 211
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=41.74 E-value=63 Score=29.59 Aligned_cols=57 Identities=14% Similarity=0.096 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHcC---CeEEEEeccChhHHHHHHHhHHhhhhc-----CCcceEEEEecCCCC
Q 023358 150 PAIINAVERAKDFYG---DLNIMVTGHSMGGAMAAFCGLDLTVNL-----GIQNVQVMTFGQPRI 206 (283)
Q Consensus 150 ~~i~~~l~~~~~~~~---~~~i~vTGHSLGGalA~l~a~~l~~~~-----~~~~v~~~tFg~Prv 206 (283)
+++..+|+...+++| ..+++|+|-|-||-..-.+|.++.+.. +.-+++-+..|-|-+
T Consensus 32 ~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t 96 (319)
T PLN02213 32 KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVT 96 (319)
T ss_pred HHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCC
Confidence 466777777777777 457999999999987777777775431 123556677777644
No 212
>PLN02209 serine carboxypeptidase
Probab=41.41 E-value=47 Score=32.03 Aligned_cols=57 Identities=16% Similarity=0.088 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHcCC---eEEEEeccChhHHHHHHHhHHhhhhc-----CCcceEEEEecCCCC
Q 023358 150 PAIINAVERAKDFYGD---LNIMVTGHSMGGAMAAFCGLDLTVNL-----GIQNVQVMTFGQPRI 206 (283)
Q Consensus 150 ~~i~~~l~~~~~~~~~---~~i~vTGHSLGGalA~l~a~~l~~~~-----~~~~v~~~tFg~Prv 206 (283)
+++.+.|+...+++|. .+++++|.|-||--+-.+|.++.+.. +.-+++-+..|.|-+
T Consensus 148 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~t 212 (437)
T PLN02209 148 KKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPIT 212 (437)
T ss_pred HHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCccc
Confidence 5677778888778874 47999999999986666666665432 123556777787755
No 213
>PRK11372 lysozyme inhibitor; Provisional
Probab=39.14 E-value=22 Score=27.39 Aligned_cols=20 Identities=35% Similarity=0.517 Sum_probs=12.9
Q ss_pred CcchhHHHHHHHHHHHHhhccc
Q 023358 1 MGQKKWLILLVFMCLFTFSCAR 22 (283)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~ 22 (283)
|-||++|++++++.| ..++.
T Consensus 1 ~~mk~ll~~~~~~lL--~gCs~ 20 (109)
T PRK11372 1 MSMKKLLIICLPVLL--TGCSA 20 (109)
T ss_pred CchHHHHHHHHHHHH--HHhcC
Confidence 779998877665553 34444
No 214
>cd02186 alpha_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino
Probab=38.62 E-value=64 Score=31.08 Aligned_cols=55 Identities=22% Similarity=0.355 Sum_probs=36.2
Q ss_pred ehhhHHHHhccchHHHHHHHHHHHHHHcCCeEEEEeccChhH----HHHHHHhHHhhhhcC
Q 023358 136 HHGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGG----AMAAFCGLDLTVNLG 192 (283)
Q Consensus 136 H~Gf~~~~~~~~~~~~i~~~l~~~~~~~~~~~i~vTGHSLGG----alA~l~a~~l~~~~~ 192 (283)
-+|++..-. .+.+++++.|++..++.....=++.=||||| ++++.+.-.|...++
T Consensus 103 a~Gy~~~G~--~~~~~i~d~ir~~~E~cD~l~gf~i~~sl~GGTGSGlgs~l~e~l~d~y~ 161 (434)
T cd02186 103 ARGHYTIGK--EIIDLVLDRIRKLADNCTGLQGFLIFHSFGGGTGSGFGSLLLERLSVDYG 161 (434)
T ss_pred ccccchhHH--HHHHHHHHHHHHHHhcCCCcceeEEEeccCCCcchhHHHHHHHHHHHhcC
Confidence 345555333 4567788888877777655555666799998 466666666666655
No 215
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=38.53 E-value=76 Score=25.77 Aligned_cols=37 Identities=14% Similarity=0.149 Sum_probs=26.3
Q ss_pred hHHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHH
Q 023358 148 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 148 ~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~ 186 (283)
+...+.+.++.+.+.+++.+|+|++|. |.+..+++..
T Consensus 120 ~~~R~~~~~~~l~~~~~~~~vlvVsHg--~~i~~l~~~~ 156 (177)
T TIGR03162 120 FYQRVSEFLEELLKAHEGDNVLIVTHG--GVIRALLAHL 156 (177)
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEECH--HHHHHHHHHH
Confidence 345666677777666677889999994 7777666543
No 216
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=38.35 E-value=61 Score=29.09 Aligned_cols=40 Identities=23% Similarity=0.135 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHHHHc-CCeEEEEeccChhHHHHHHHhHHh
Q 023358 148 IRPAIINAVERAKDFY-GDLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 148 ~~~~i~~~l~~~~~~~-~~~~i~vTGHSLGGalA~l~a~~l 187 (283)
+...+..+.+.+.+.+ |+.+|++.|.|-|++.|-.++-.+
T Consensus 73 ~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 73 IEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred hHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 4556666666665554 578999999999999998887665
No 217
>cd00286 Tubulin_FtsZ Tubulin/FtsZ: Family includes tubulin alpha-, beta-, gamma-, delta-, and epsilon-tubulins as well as FtsZ, all of which are involved in polymer formation. Tubulin is the major component of microtubules, but also exists as a heterodimer and as a curved oligomer. Microtubules exist in all eukaryotic cells and are responsible for many functions, including cellular transport, cell motility, and mitosis. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria, archaea, and chloroplasts.
Probab=38.13 E-value=51 Score=30.22 Aligned_cols=45 Identities=16% Similarity=0.285 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHHHHHcCCeEEEEeccChhH----HHHHHHhHHhhhhcC
Q 023358 148 IRPAIINAVERAKDFYGDLNIMVTGHSMGG----AMAAFCGLDLTVNLG 192 (283)
Q Consensus 148 ~~~~i~~~l~~~~~~~~~~~i~vTGHSLGG----alA~l~a~~l~~~~~ 192 (283)
..+++.+.|++..++......++.=||||| +++..++-.++..++
T Consensus 71 ~~e~i~~~ir~~~E~cD~~~gf~i~~slgGGTGsG~~~~i~e~l~d~y~ 119 (328)
T cd00286 71 YQEEILDIIRKEAEECDSLQGFFITHSLGGGTGSGLGPVLAERLKDEYP 119 (328)
T ss_pred HHHHHHHHHHHHHHhCCCccceEEEeecCCCccccHHHHHHHHHHHHcC
Confidence 456777778777777777778888899988 677777777766654
No 218
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=37.83 E-value=22 Score=32.43 Aligned_cols=40 Identities=23% Similarity=0.442 Sum_probs=27.4
Q ss_pred hHHHHHHHHHHHHHHcC----CeEEEEeccChhHHHHHHHhHHhhhh
Q 023358 148 IRPAIINAVERAKDFYG----DLNIMVTGHSMGGAMAAFCGLDLTVN 190 (283)
Q Consensus 148 ~~~~i~~~l~~~~~~~~----~~~i~vTGHSLGGalA~l~a~~l~~~ 190 (283)
+..+++..|+ +.|| ...-++.|-||||.+|.++++..-..
T Consensus 158 L~~eLlP~v~---~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~ 201 (299)
T COG2382 158 LAQELLPYVE---ERYPTSADADGRVLAGDSLGGLVSLYAGLRHPER 201 (299)
T ss_pred HHHHhhhhhh---ccCcccccCCCcEEeccccccHHHHHHHhcCchh
Confidence 4455555554 3444 23468999999999999999865443
No 219
>cd02188 gamma_tubulin Gamma-tubulin is a ubiquitous phylogenetically conserved member of tubulin superfamily. Gamma is a low abundance protein present within the cells in both various types of microtubule-organizing centers and cytoplasmic protein complexes. Gamma-tubulin recruits the alpha/beta-tubulin dimers that form the minus ends of microtubules and is thought to be involved in microtubule nucleation and capping.
Probab=37.77 E-value=86 Score=30.20 Aligned_cols=47 Identities=21% Similarity=0.293 Sum_probs=34.3
Q ss_pred chHHHHHHHHHHHHHHcCCeEEEEeccChhH----HHHHHHhHHhhhhcCC
Q 023358 147 TIRPAIINAVERAKDFYGDLNIMVTGHSMGG----AMAAFCGLDLTVNLGI 193 (283)
Q Consensus 147 ~~~~~i~~~l~~~~~~~~~~~i~vTGHSLGG----alA~l~a~~l~~~~~~ 193 (283)
...+++++.|++..++.....=++.=||||| ++++++.-.|...++.
T Consensus 111 ~~~d~i~d~ir~~~E~cd~l~gf~i~~SlgGGTGSG~gs~l~e~L~d~y~~ 161 (431)
T cd02188 111 EVQEEILDIIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLERLNDRYPK 161 (431)
T ss_pred HHHHHHHHHHHHHHhcCCCcceeEEEecCCCCcchhHHHHHHHHHHhHcCc
Confidence 5677888888887777666666778899997 4666666666666553
No 220
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=37.56 E-value=21 Score=34.11 Aligned_cols=54 Identities=11% Similarity=0.073 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCC
Q 023358 151 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI 206 (283)
Q Consensus 151 ~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prv 206 (283)
++-..|..+.+.-...++..+|||.|.+..-++...-... ..+|+.+..=+|.+
T Consensus 146 DLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~--~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 146 DLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEY--NKKIKSFIALAPAA 199 (403)
T ss_pred CHHHHHHHHHHhccccceEEEEEEccchhheehhcccchh--hhhhheeeeecchh
Confidence 3444555555655678999999999998776554432111 13455444445544
No 221
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=37.29 E-value=80 Score=28.99 Aligned_cols=55 Identities=20% Similarity=0.138 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHc----CCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCC
Q 023358 150 PAIINAVERAKDFY----GDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQP 204 (283)
Q Consensus 150 ~~i~~~l~~~~~~~----~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~P 204 (283)
+++.+.|+.++... ...+|++.|||-|---.......-........|.-...=+|
T Consensus 88 ~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQAp 146 (303)
T PF08538_consen 88 EEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAP 146 (303)
T ss_dssp HHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE
T ss_pred HHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCC
Confidence 46666676666653 45799999999998765443332221111355665555555
No 222
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=36.42 E-value=82 Score=26.39 Aligned_cols=37 Identities=14% Similarity=0.243 Sum_probs=26.7
Q ss_pred hHHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHH
Q 023358 148 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 148 ~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~ 186 (283)
+...+.+.++++.+.+++.+|+|++| ||.+..++...
T Consensus 124 ~~~Rv~~~l~~l~~~~~~~~iliVsH--g~~i~~l~~~~ 160 (199)
T PRK15004 124 FSQRVERFIARLSAFQHYQNLLIVSH--QGVLSLLIARL 160 (199)
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEcC--hHHHHHHHHHH
Confidence 44566677777777777788999999 57777666543
No 223
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=36.28 E-value=18 Score=31.82 Aligned_cols=20 Identities=25% Similarity=0.383 Sum_probs=15.3
Q ss_pred CeEEEEeccChhHHHHHHHh
Q 023358 165 DLNIMVTGHSMGGAMAAFCG 184 (283)
Q Consensus 165 ~~~i~vTGHSLGGalA~l~a 184 (283)
-..|+|-|||||.+=....-
T Consensus 234 i~~I~i~GhSl~~~D~~Yf~ 253 (270)
T PF14253_consen 234 IDEIIIYGHSLGEVDYPYFE 253 (270)
T ss_pred CCEEEEEeCCCchhhHHHHH
Confidence 46899999999987554443
No 224
>PF10855 DUF2648: Protein of unknown function (DUF2648); InterPro: IPR022561 This family of proteins with unknown function appears to be restricted to eubacteia.
Probab=36.22 E-value=14 Score=21.83 Aligned_cols=16 Identities=25% Similarity=0.279 Sum_probs=10.1
Q ss_pred chhHHHHHHHHHHHHh
Q 023358 3 QKKWLILLVFMCLFTF 18 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~ 18 (283)
|||++|+|++..-.+.
T Consensus 1 MKkl~i~L~l~ga~f~ 16 (33)
T PF10855_consen 1 MKKLAIILILGGAAFY 16 (33)
T ss_pred CCceeehhhhhhHHHH
Confidence 7888887666544433
No 225
>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]
Probab=35.98 E-value=1.4e+02 Score=24.79 Aligned_cols=59 Identities=19% Similarity=0.223 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHcCCeEEEEeccC-----------hhHHHHHHHhHHhhhhc-CCcceEEEEecC--CCCCCH
Q 023358 151 AIINAVERAKDFYGDLNIMVTGHS-----------MGGAMAAFCGLDLTVNL-GIQNVQVMTFGQ--PRIGNA 209 (283)
Q Consensus 151 ~i~~~l~~~~~~~~~~~i~vTGHS-----------LGGalA~l~a~~l~~~~-~~~~v~~~tFg~--Prvgn~ 209 (283)
+.++.+.+.++++|..+|.|.||. |+--=|.-.+-+|.... ...++.+..||. |.+.|.
T Consensus 100 ~~L~~~a~~L~~~p~~~i~V~GHTD~~Gs~~yN~~LS~rRA~aV~~~L~~~Gv~~~~i~~~G~G~~~Pia~n~ 172 (190)
T COG2885 100 ATLDELAKYLKKNPITRILVEGHTDSTGSDEYNQALSERRAEAVADYLVSQGVVADRISTVGYGEEKPIASNA 172 (190)
T ss_pred HHHHHHHHHHHhCCCcEEEEEecCCCCCCHHHhHHHHHHHHHHHHHHHHHcCCCcccEEEEEcCcCCCCCCCC
Confidence 445556667778899999999993 44444444444554442 234788999996 666444
No 226
>COG0627 Predicted esterase [General function prediction only]
Probab=35.62 E-value=17 Score=33.57 Aligned_cols=21 Identities=38% Similarity=0.431 Sum_probs=17.7
Q ss_pred EEEEeccChhHHHHHHHhHHh
Q 023358 167 NIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 167 ~i~vTGHSLGGalA~l~a~~l 187 (283)
+.-++||||||.=|...|+.-
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~ 173 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKH 173 (316)
T ss_pred CceeEEEeccchhhhhhhhhC
Confidence 689999999999888877653
No 227
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=35.38 E-value=83 Score=28.02 Aligned_cols=22 Identities=27% Similarity=0.436 Sum_probs=17.9
Q ss_pred eEEEEeccChhHHHHHHHhHHh
Q 023358 166 LNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 166 ~~i~vTGHSLGGalA~l~a~~l 187 (283)
.+++=.|||||+-+-.|++...
T Consensus 90 lP~~~vGHSlGcklhlLi~s~~ 111 (250)
T PF07082_consen 90 LPVYGVGHSLGCKLHLLIGSLF 111 (250)
T ss_pred CCeeeeecccchHHHHHHhhhc
Confidence 4677799999999888877654
No 228
>PRK09408 ompX outer membrane protein X; Provisional
Probab=34.87 E-value=13 Score=31.10 Aligned_cols=19 Identities=21% Similarity=0.406 Sum_probs=14.8
Q ss_pred chhHHHHHHHHHHHHhhcc
Q 023358 3 QKKWLILLVFMCLFTFSCA 21 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~ 21 (283)
|||++++++++|+++++.+
T Consensus 1 mkk~~~~~~~~~~~~~~~~ 19 (171)
T PRK09408 1 MKKIACLSALACVLAVTAG 19 (171)
T ss_pred CceEehHHHHHHHHHHhhh
Confidence 8999999888777666554
No 229
>PF06291 Lambda_Bor: Bor protein; InterPro: IPR010438 This family consists of several Bacteriophage lambda Bor and Escherichia coli Iss proteins. Expression of bor significantly increases the survival of the E. coli host cell in animal serum. This property is a well known bacterial virulence determinant indeed, bor and its adjacent sequences are highly homologous to the iss serum resistance locus of the plasmid ColV2-K94, which confers virulence in animals. It has been suggested that lysogeny may generally have a role in bacterial survival in animal hosts, and perhaps in pathogenesis [].
Probab=34.14 E-value=33 Score=25.90 Aligned_cols=26 Identities=23% Similarity=0.249 Sum_probs=16.4
Q ss_pred chhHHHHHHHHHHHHhhcccchhhcc
Q 023358 3 QKKWLILLVFMCLFTFSCARELRVKR 28 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 28 (283)
|||+|+.+++++++..-+-+.+.+..
T Consensus 1 mKk~ll~~~lallLtgCatqt~~~~~ 26 (97)
T PF06291_consen 1 MKKLLLAAALALLLTGCATQTFTVGN 26 (97)
T ss_pred CcHHHHHHHHHHHHcccceeEEEeCC
Confidence 89988888776544333455555554
No 230
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=33.79 E-value=44 Score=32.12 Aligned_cols=51 Identities=16% Similarity=0.228 Sum_probs=28.6
Q ss_pred EehhhHHHHhccchHHHHHHHHHHHHHHc--CCeEEEEeccChhHHHHHHHhHHhhhhcC
Q 023358 135 VHHGFYSAYHNTTIRPAIINAVERAKDFY--GDLNIMVTGHSMGGAMAAFCGLDLTVNLG 192 (283)
Q Consensus 135 vH~Gf~~~~~~~~~~~~i~~~l~~~~~~~--~~~~i~vTGHSLGGalA~l~a~~l~~~~~ 192 (283)
-|-||+.+-. .+ .+....|+.+++.. ...+|+.-|-|.||.|| ++++.++|
T Consensus 137 ~hlgyLtseQ--AL-ADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLa----AWfRlKYP 189 (492)
T KOG2183|consen 137 RHLGYLTSEQ--AL-ADFAELLTFLKRDLSAEASPVIAFGGSYGGMLA----AWFRLKYP 189 (492)
T ss_pred hhhccccHHH--HH-HHHHHHHHHHhhccccccCcEEEecCchhhHHH----HHHHhcCh
Confidence 4667776544 11 12223333333332 25689999999999666 45555543
No 231
>PF13173 AAA_14: AAA domain
Probab=33.58 E-value=45 Score=25.78 Aligned_cols=30 Identities=20% Similarity=0.108 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHcCCeEEEEeccChhHHHH
Q 023358 151 AIINAVERAKDFYGDLNIMVTGHSMGGAMA 180 (283)
Q Consensus 151 ~i~~~l~~~~~~~~~~~i~vTGHSLGGalA 180 (283)
++.+.++.+....++.+|++||.|.+....
T Consensus 75 ~~~~~lk~l~d~~~~~~ii~tgS~~~~l~~ 104 (128)
T PF13173_consen 75 DWEDALKFLVDNGPNIKIILTGSSSSLLSK 104 (128)
T ss_pred cHHHHHHHHHHhccCceEEEEccchHHHhh
Confidence 456667777777778999999999877644
No 232
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=33.39 E-value=1.6e+02 Score=27.50 Aligned_cols=42 Identities=14% Similarity=0.192 Sum_probs=28.9
Q ss_pred CeEEEEeccChhHHHHHHHhHHhhhhc-CCcceEEEEecCCCC
Q 023358 165 DLNIMVTGHSMGGAMAAFCGLDLTVNL-GIQNVQVMTFGQPRI 206 (283)
Q Consensus 165 ~~~i~vTGHSLGGalA~l~a~~l~~~~-~~~~v~~~tFg~Prv 206 (283)
..+|.+.|-|-||.+|.-.|..+.... ...+++....=.|-.
T Consensus 165 ~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~ 207 (336)
T KOG1515|consen 165 PSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFF 207 (336)
T ss_pred cccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEeccc
Confidence 467999999999999999999887642 233444333333433
No 233
>PTZ00010 tubulin beta chain; Provisional
Probab=33.39 E-value=92 Score=30.14 Aligned_cols=56 Identities=18% Similarity=0.255 Sum_probs=36.7
Q ss_pred ehhhHHHHhccchHHHHHHHHHHHHHHcCCeEEEEeccChhH----HHHHHHhHHhhhhcCC
Q 023358 136 HHGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGG----AMAAFCGLDLTVNLGI 193 (283)
Q Consensus 136 H~Gf~~~~~~~~~~~~i~~~l~~~~~~~~~~~i~vTGHSLGG----alA~l~a~~l~~~~~~ 193 (283)
-+|++..-. .+.+++.+.+++..++.....=++.=||+|| ++++.+.-.|...++.
T Consensus 102 a~G~~~~g~--~~~~~i~d~irk~~E~cd~l~gf~i~~Sl~GGTGSGlgs~l~e~L~dey~~ 161 (445)
T PTZ00010 102 AKGHYTEGA--ELIDSVLDVVRKEAESCDCLQGFQITHSLGGGTGSGMGTLLISKLREEYPD 161 (445)
T ss_pred ccchhhhhH--HHHHHHHHHHhhhhhhccCccceEEEeccCCCccccHHHHHHHHHHhhCCc
Confidence 346655333 4567788888887777665555677799987 4666666666666543
No 234
>cd02190 epsilon_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The epsilon-tubulins which are widespread but not ubiquitous among eukaryotes play a role in basal body/centriole morphogenesis.
Probab=33.14 E-value=73 Score=30.10 Aligned_cols=46 Identities=17% Similarity=0.273 Sum_probs=31.5
Q ss_pred chHHHHHHHHHHHHHHcCCeEEEEeccChhH----HHHHHHhHHhhhhcC
Q 023358 147 TIRPAIINAVERAKDFYGDLNIMVTGHSMGG----AMAAFCGLDLTVNLG 192 (283)
Q Consensus 147 ~~~~~i~~~l~~~~~~~~~~~i~vTGHSLGG----alA~l~a~~l~~~~~ 192 (283)
...+++.+.|++..++.....-++.=||||| +++..+.-.+...++
T Consensus 80 ~~~~~~~d~ir~~~E~cd~l~gf~i~~sl~GGTGSG~gs~l~e~l~~~y~ 129 (379)
T cd02190 80 QYIDSILEKIRKAAEKCDSLQSFFILHSLGGGTGSGLGTYVLELLADEFP 129 (379)
T ss_pred hHHHHHHHHHHHHHhhCcCcceEEEEeecCCCcchhHHHHHHHHHHHhcC
Confidence 3456778888877777665555777799997 456666666666554
No 235
>PTZ00335 tubulin alpha chain; Provisional
Probab=33.13 E-value=73 Score=30.87 Aligned_cols=56 Identities=20% Similarity=0.318 Sum_probs=36.0
Q ss_pred ehhhHHHHhccchHHHHHHHHHHHHHHcCCeEEEEeccChhHH----HHHHHhHHhhhhcCC
Q 023358 136 HHGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGGA----MAAFCGLDLTVNLGI 193 (283)
Q Consensus 136 H~Gf~~~~~~~~~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGa----lA~l~a~~l~~~~~~ 193 (283)
-+|++..-. .+.+++++.|++..++.....=++.=|||||+ +++.+.-.|...++.
T Consensus 104 a~Gy~~~G~--~~~d~i~d~ir~~~E~cD~l~gf~i~~Sl~GGTGSGlgs~l~e~l~d~yp~ 163 (448)
T PTZ00335 104 ARGHYTIGK--EIVDLCLDRIRKLADNCTGLQGFLVFHAVGGGTGSGLGSLLLERLSVDYGK 163 (448)
T ss_pred cccccchhh--hHhHHHHHHHHHhHHhccCccceeEeeccCCCccchHHHHHHHHHHHhccc
Confidence 345554332 45678888888877766555545667999984 666666666666553
No 236
>PTZ00387 epsilon tubulin; Provisional
Probab=32.92 E-value=72 Score=31.11 Aligned_cols=56 Identities=18% Similarity=0.113 Sum_probs=36.3
Q ss_pred ehhhHHHHhccchHHHHHHHHHHHHHHcCCeEEEEeccChhH----HHHHHHhHHhhhhcCC
Q 023358 136 HHGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGG----AMAAFCGLDLTVNLGI 193 (283)
Q Consensus 136 H~Gf~~~~~~~~~~~~i~~~l~~~~~~~~~~~i~vTGHSLGG----alA~l~a~~l~~~~~~ 193 (283)
-.|++.... ...+++.+.|++..++.....=++.=||||| ++++.++-.+...++.
T Consensus 103 a~G~~~~g~--~~~d~~~d~Ir~~~E~cD~l~gf~i~~slgGGTGSGlgs~lle~l~d~y~~ 162 (465)
T PTZ00387 103 AVGHMEYGD--KYIDSISESVRRQVEQCDSLQSFFLMHSLGGGTGSGLGTRILGMLEDEFPH 162 (465)
T ss_pred CCCcccccH--HHHHHHHHHHHHHHHhccCcceEEEEeecCCCcchhHHHHHHHHHHHhccc
Confidence 345544322 4567788888887777655554566799998 5667777677666653
No 237
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=32.29 E-value=30 Score=30.41 Aligned_cols=39 Identities=13% Similarity=0.203 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhh
Q 023358 150 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTV 189 (283)
Q Consensus 150 ~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~ 189 (283)
+++...++.+.... ..--++.|||-||-++.+.+..+..
T Consensus 90 dDL~sV~q~~s~~n-r~v~vi~gHSkGg~Vvl~ya~K~~d 128 (269)
T KOG4667|consen 90 DDLHSVIQYFSNSN-RVVPVILGHSKGGDVVLLYASKYHD 128 (269)
T ss_pred HHHHHHHHHhccCc-eEEEEEEeecCccHHHHHHHHhhcC
Confidence 44444444443321 1223688999999999998886643
No 238
>PRK13463 phosphatase PhoE; Provisional
Probab=31.97 E-value=1.1e+02 Score=25.90 Aligned_cols=37 Identities=14% Similarity=0.206 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHH
Q 023358 148 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 148 ~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~ 186 (283)
+...+...++.+.+++++.+|++++| ||.+-.+++..
T Consensus 126 ~~~R~~~~l~~i~~~~~~~~vlvVsH--g~~ir~~~~~~ 162 (203)
T PRK13463 126 VHKRVIEGMQLLLEKHKGESILIVSH--AAAAKLLVGHF 162 (203)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEeC--hHHHHHHHHHH
Confidence 34556666666666777778999999 46666665543
No 239
>PRK13254 cytochrome c-type biogenesis protein CcmE; Reviewed
Probab=31.42 E-value=1.7e+02 Score=23.86 Aligned_cols=25 Identities=8% Similarity=0.105 Sum_probs=18.4
Q ss_pred ceEEEEEEECCCCeEEEEEcCCCcCC
Q 023358 85 CLQGFLGVAKDLNAIVIAFRGTQEHS 110 (283)
Q Consensus 85 ~~~~~v~~~~~~~~ivVafRGT~~~s 110 (283)
...-|...|. ...+-|.|+|..|+.
T Consensus 71 ~~~~F~ltD~-~~~i~V~Y~G~lPd~ 95 (148)
T PRK13254 71 LTVRFVVTDG-NATVPVVYTGILPDL 95 (148)
T ss_pred CEEEEEEEeC-CeEEEEEECCCCCcc
Confidence 3446777776 578999999998643
No 240
>PLN00220 tubulin beta chain; Provisional
Probab=31.18 E-value=65 Score=31.15 Aligned_cols=68 Identities=16% Similarity=0.279 Sum_probs=40.2
Q ss_pred ehhhHHHHhccchHHHHHHHHHHHHHHcCCeEEEEeccChhHH----HHHHHhHHhhhhcCCcc-eEEEEecCCC
Q 023358 136 HHGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGGA----MAAFCGLDLTVNLGIQN-VQVMTFGQPR 205 (283)
Q Consensus 136 H~Gf~~~~~~~~~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGa----lA~l~a~~l~~~~~~~~-v~~~tFg~Pr 205 (283)
-+|++..-. .+.+++++.|++..++.....=++.=|||||+ +++.+.-.|...++... +.+..|-.|.
T Consensus 102 a~G~~~~g~--~~~~~~~d~ir~~~E~cd~l~gf~~~~sl~GGTGSG~gs~l~~~l~~~y~~~~~~~~~v~P~~~ 174 (447)
T PLN00220 102 AKGHYTEGA--ELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 174 (447)
T ss_pred CceeecccH--HHHHHHHHHHHHHHHhCcCcCceEEEEecCCCccccHHHHHHHHHHHhccccceeeeEEECCCc
Confidence 345554322 45678888888888776655667777999875 45555555666554332 2233344453
No 241
>cd06059 Tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino-termi
Probab=30.91 E-value=77 Score=29.86 Aligned_cols=46 Identities=15% Similarity=0.224 Sum_probs=30.6
Q ss_pred chHHHHHHHHHHHHHHcCCeEEEEeccChhHH----HHHHHhHHhhhhcC
Q 023358 147 TIRPAIINAVERAKDFYGDLNIMVTGHSMGGA----MAAFCGLDLTVNLG 192 (283)
Q Consensus 147 ~~~~~i~~~l~~~~~~~~~~~i~vTGHSLGGa----lA~l~a~~l~~~~~ 192 (283)
...+++.+.|++..++.....-++.=|||||+ ++..+.-.+...++
T Consensus 70 ~~~e~~~d~ir~~~E~cD~l~gf~i~~sl~GGTGSG~gs~l~e~l~d~y~ 119 (382)
T cd06059 70 ELIDEILDRIRKQVEKCDSLQGFQITHSLGGGTGSGLGSLLLELLSDEYP 119 (382)
T ss_pred HHHHHHHHHHHHHHHhCCCcCceEEEEecCCCcchhHHHHHHHHHHHhcC
Confidence 34567778888777776655556777898874 55555555555554
No 242
>cd02187 beta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino-
Probab=30.85 E-value=82 Score=30.25 Aligned_cols=56 Identities=16% Similarity=0.258 Sum_probs=35.7
Q ss_pred hhhHHHHhccchHHHHHHHHHHHHHHcCCeEEEEeccChhH----HHHHHHhHHhhhhcCCc
Q 023358 137 HGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGG----AMAAFCGLDLTVNLGIQ 194 (283)
Q Consensus 137 ~Gf~~~~~~~~~~~~i~~~l~~~~~~~~~~~i~vTGHSLGG----alA~l~a~~l~~~~~~~ 194 (283)
+|++..-. .+.+++++.|++..++.....=++.=||||| ++++.+.-.|...++..
T Consensus 102 ~G~~~~G~--~~~e~i~d~ir~~~E~cD~l~gf~~~~sl~GGTGSG~gs~l~e~l~d~y~~~ 161 (425)
T cd02187 102 KGHYTEGA--ELIDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDR 161 (425)
T ss_pred ccchhhcH--HHHHHHHHHHHHhhccCCCcceEEEEeecCCCccccHHHHHHHHHHHhcCCc
Confidence 45554322 4567788888877766655555566689887 56666666676665543
No 243
>PLN00221 tubulin alpha chain; Provisional
Probab=30.59 E-value=1.1e+02 Score=29.78 Aligned_cols=55 Identities=18% Similarity=0.300 Sum_probs=36.8
Q ss_pred hhhHHHHhccchHHHHHHHHHHHHHHcCCeEEEEeccChhH----HHHHHHhHHhhhhcCC
Q 023358 137 HGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGG----AMAAFCGLDLTVNLGI 193 (283)
Q Consensus 137 ~Gf~~~~~~~~~~~~i~~~l~~~~~~~~~~~i~vTGHSLGG----alA~l~a~~l~~~~~~ 193 (283)
+||+..-. .+.+.+++.|++..++.....=++.=||||| ++++++.-.|...++.
T Consensus 105 ~Gy~~~g~--~~~~~i~d~ir~~~E~cD~l~gf~i~~Sl~GGtGSGlgs~~le~l~d~y~~ 163 (450)
T PLN00221 105 RGHYTIGK--EIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGK 163 (450)
T ss_pred ccccchhH--HHHHHHHHHHHHHHHhccCccceeEeeccCCCccchHHHHHHHHHHHhccc
Confidence 45554332 4567888888888877665565667799997 4666666666666553
No 244
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=30.32 E-value=1.6e+02 Score=21.37 Aligned_cols=39 Identities=23% Similarity=0.290 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHH---cCCeEEEEeccChhHHHHHHHhHHh
Q 023358 149 RPAIINAVERAKDF---YGDLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 149 ~~~i~~~l~~~~~~---~~~~~i~vTGHSLGGalA~l~a~~l 187 (283)
...+.+.+...++. ...+++.|+|-|-|=+||+-.++-+
T Consensus 20 ~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 34445555444432 2358999999999999997766644
No 245
>PRK15240 resistance to complement killing; Provisional
Probab=29.56 E-value=27 Score=29.54 Aligned_cols=17 Identities=12% Similarity=0.182 Sum_probs=11.7
Q ss_pred chhHHHHHHHHHHHHhh
Q 023358 3 QKKWLILLVFMCLFTFS 19 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~~ 19 (283)
|||.||++++++.+++.
T Consensus 1 Mkk~~~~~~~~~~~~~~ 17 (185)
T PRK15240 1 MKKIVLSSLLLSAAGLA 17 (185)
T ss_pred CchhHHHHHHHHHHHhc
Confidence 89999887775554443
No 246
>PLN00222 tubulin gamma chain; Provisional
Probab=29.32 E-value=1.4e+02 Score=28.99 Aligned_cols=47 Identities=21% Similarity=0.297 Sum_probs=34.1
Q ss_pred chHHHHHHHHHHHHHHcCCeEEEEeccChhH----HHHHHHhHHhhhhcCC
Q 023358 147 TIRPAIINAVERAKDFYGDLNIMVTGHSMGG----AMAAFCGLDLTVNLGI 193 (283)
Q Consensus 147 ~~~~~i~~~l~~~~~~~~~~~i~vTGHSLGG----alA~l~a~~l~~~~~~ 193 (283)
...+.+++.|++..++.....-++.=||||| ++++.+.-.|...++.
T Consensus 113 ~~~d~i~d~ir~~~E~cd~l~gf~i~~sl~GGTGSGlgs~lle~L~d~y~~ 163 (454)
T PLN00222 113 QVEEDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLEALNDRYSK 163 (454)
T ss_pred HHHHHHHHHHHHHHHhCCCccceEEeecCCCCccchHHHHHHHHHHhhcCC
Confidence 5677888888877777666666777899998 4666666667666553
No 247
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=28.51 E-value=1.4e+02 Score=23.14 Aligned_cols=31 Identities=10% Similarity=0.204 Sum_probs=20.5
Q ss_pred hHHHHHHHHHHHHH-HcCCeEEEEeccChhHHHH
Q 023358 148 IRPAIINAVERAKD-FYGDLNIMVTGHSMGGAMA 180 (283)
Q Consensus 148 ~~~~i~~~l~~~~~-~~~~~~i~vTGHSLGGalA 180 (283)
+...+.+.++.+.. ..++..|++++|. |.+.
T Consensus 125 ~~~R~~~~~~~l~~~~~~~~~vliVsHg--~~i~ 156 (158)
T PF00300_consen 125 FQQRVKQFLDELIAYKRPGENVLIVSHG--GFIR 156 (158)
T ss_dssp HHHHHHHHHHHHHHHHHTTSEEEEEE-H--HHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEecH--HHHH
Confidence 44566666666665 5678899999994 5544
No 248
>PRK15007 putative ABC transporter arginine-biding protein; Provisional
Probab=26.92 E-value=46 Score=28.36 Aligned_cols=44 Identities=23% Similarity=0.215 Sum_probs=25.4
Q ss_pred chhHHHHHHHHHHHHhhc-ccchhhcc--CCCC----------ccCCHHHHHHHHHH
Q 023358 3 QKKWLILLVFMCLFTFSC-ARELRVKR--HHSP----------QVYNHTLATILVEY 46 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~----------~~y~~~~a~~l~~~ 46 (283)
||+|||+++++.+..... .+.|++.. +.++ .+++.++++.+++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~~P~~~~~~~g~~~G~~~dl~~~i~~~ 57 (243)
T PRK15007 1 MKKVLIAALIAGFSLSATAAETIRFATEASYPPFESIDANNQIVGFDVDLAQALCKE 57 (243)
T ss_pred CchHHHHHHHHHHhcccccCCcEEEEeCCCCCCceeeCCCCCEEeeeHHHHHHHHHH
Confidence 799998877766655543 44455543 2223 34555566655543
No 249
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=26.70 E-value=1.7e+02 Score=28.02 Aligned_cols=106 Identities=19% Similarity=0.278 Sum_probs=49.2
Q ss_pred cceEEEEEEECCCC---eEEEEEcCCCcCChH-HHH---hhc----cccccccCCCCCCCceEehhhHHHHhccchHHHH
Q 023358 84 HCLQGFLGVAKDLN---AIVIAFRGTQEHSIQ-NWI---EDL----FWKQLDINYPGMSDAMVHHGFYSAYHNTTIRPAI 152 (283)
Q Consensus 84 ~~~~~~v~~~~~~~---~ivVafRGT~~~s~~-d~~---~Dl----~~~~~~~~~~~~~~~~vH~Gf~~~~~~~~~~~~i 152 (283)
+...||+-. ++.+ -+||..-|-+ +++ |+. .|. -+..+.++.|+.... .|..+-..+. .+...+
T Consensus 175 ~~I~g~Lhl-P~~~~p~P~VIv~gGlD--s~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s-~~~~l~~D~~--~l~~aV 248 (411)
T PF06500_consen 175 KTIPGYLHL-PSGEKPYPTVIVCGGLD--SLQEDLYRLFRDYLAPRGIAMLTVDMPGQGES-PKWPLTQDSS--RLHQAV 248 (411)
T ss_dssp CEEEEEEEE-SSSSS-EEEEEEE--TT--S-GGGGHHHHHCCCHHCT-EEEEE--TTSGGG-TTT-S-S-CC--HHHHHH
T ss_pred cEEEEEEEc-CCCCCCCCEEEEeCCcc--hhHHHHHHHHHHHHHhCCCEEEEEccCCCccc-ccCCCCcCHH--HHHHHH
Confidence 556677654 3332 4777777776 443 432 221 122233445553221 1222211111 123344
Q ss_pred HHHHHHHHHHcC---CeEEEEeccChhHHHHHHHhHHhhhhcCCcce-EEEEecCC
Q 023358 153 INAVERAKDFYG---DLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQP 204 (283)
Q Consensus 153 ~~~l~~~~~~~~---~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v-~~~tFg~P 204 (283)
++.| ...| ..+|-+.|-|+||.+|.-+|.. ....+ -|++.|+|
T Consensus 249 Ld~L----~~~p~VD~~RV~~~G~SfGGy~AvRlA~l-----e~~RlkavV~~Ga~ 295 (411)
T PF06500_consen 249 LDYL----ASRPWVDHTRVGAWGFSFGGYYAVRLAAL-----EDPRLKAVVALGAP 295 (411)
T ss_dssp HHHH----HHSTTEEEEEEEEEEETHHHHHHHHHHHH-----TTTT-SEEEEES--
T ss_pred HHHH----hcCCccChhheEEEEeccchHHHHHHHHh-----cccceeeEeeeCch
Confidence 4444 3345 4689999999999999876641 12233 46777777
No 250
>TIGR03519 Bac_Flav_fam_1 Bacteroidetes-specific putative membrane protein. This model describes a protein family unique to, and greatly expanded in, the Bacteriodetes. Species in this lineage include several, such as Cytophaga hutchinsonii and Flavobacterium johnsoniae, that exhibit a poorly understood rapid gliding phenotype. Several members of this protein family are found in operons with other genes whose loss leads to a loss a this motility.
Probab=26.64 E-value=33 Score=31.00 Aligned_cols=16 Identities=44% Similarity=0.669 Sum_probs=11.9
Q ss_pred chhHHHHHHHHHHHHh
Q 023358 3 QKKWLILLVFMCLFTF 18 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~ 18 (283)
|||++++++++++++.
T Consensus 1 mkk~~~~~~l~~~~~~ 16 (292)
T TIGR03519 1 MKKILLLLLLLLLLTV 16 (292)
T ss_pred CceeehhhHHHHHhhh
Confidence 7888888777766655
No 251
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=26.55 E-value=90 Score=26.55 Aligned_cols=38 Identities=18% Similarity=0.213 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHcCCeEEEEeccCh----hHHHHHHHhHHhhh
Q 023358 151 AIINAVERAKDFYGDLNIMVTGHSM----GGAMAAFCGLDLTV 189 (283)
Q Consensus 151 ~i~~~l~~~~~~~~~~~i~vTGHSL----GGalA~l~a~~l~~ 189 (283)
...+.+.++.++. +..++++|||. |+.+|..+|..|..
T Consensus 95 ~~a~al~~~i~~~-~p~lVL~~~t~~~~~grdlaprlAarLga 136 (202)
T cd01714 95 ATAKALAAAIKKI-GVDLILTGKQSIDGDTGQVGPLLAELLGW 136 (202)
T ss_pred HHHHHHHHHHHHh-CCCEEEEcCCcccCCcCcHHHHHHHHhCC
Confidence 3344444444443 36899999999 78899888887643
No 252
>TIGR03656 IsdC heme uptake protein IsdC. Isd proteins are iron-regulated surface proteins found in Bacillus, Staphylococcus and Listeria species and are responsible for heme scavenging from hemoproteins. The IsdC protein consists of an N-terminal hydrophobic signal sequence, a central NEAT (NEAr Transporter, pfam05031) domain which confers the ability to bind heme and a C-terminal SrtB processing signal which targets the protein to the cell wall. IsdC is believed to make a direct contact with, and transfer heme to, the heme-binding component (IsdE) of an ABC transporter in the cytoplasmic membrane, and to receive heme from other NEAT-containing heme-binding proteins also localized in the cell wall.
Probab=26.47 E-value=47 Score=28.89 Aligned_cols=17 Identities=29% Similarity=0.551 Sum_probs=13.3
Q ss_pred chhHHHHHHHHHHHHhh
Q 023358 3 QKKWLILLVFMCLFTFS 19 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~~ 19 (283)
||++|-|+++.|+|.++
T Consensus 1 mk~~~~~~~~~~~~~f~ 17 (217)
T TIGR03656 1 MKKILVFAFFTTILAFI 17 (217)
T ss_pred CcchhhHHHHHHHHHHh
Confidence 68898888877777764
No 253
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=26.36 E-value=74 Score=28.27 Aligned_cols=19 Identities=37% Similarity=0.494 Sum_probs=14.0
Q ss_pred eEEEEeccChhHHHHHHHh
Q 023358 166 LNIMVTGHSMGGAMAAFCG 184 (283)
Q Consensus 166 ~~i~vTGHSLGGalA~l~a 184 (283)
.+-.+.|||||--.|..++
T Consensus 82 ~p~~~~GhSlGE~aA~~~a 100 (298)
T smart00827 82 RPDAVVGHSLGEIAAAYVA 100 (298)
T ss_pred cccEEEecCHHHHHHHHHh
Confidence 3458999999986665544
No 254
>PRK10144 formate-dependent nitrite reductase complex subunit NrfF; Provisional
Probab=25.94 E-value=86 Score=24.89 Aligned_cols=8 Identities=25% Similarity=1.016 Sum_probs=4.9
Q ss_pred cCCCCCCC
Q 023358 62 TCSRCDGL 69 (283)
Q Consensus 62 ~c~~~~~~ 69 (283)
.|+.|++.
T Consensus 42 RC~vCqnq 49 (126)
T PRK10144 42 RCPQCQNQ 49 (126)
T ss_pred CCCCCCCC
Confidence 36677653
No 255
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=25.92 E-value=1.3e+02 Score=28.38 Aligned_cols=40 Identities=30% Similarity=0.308 Sum_probs=26.8
Q ss_pred chHHHHHHHHHHHHHHcCCeEEE-EeccChhHHHHHHHhHHh
Q 023358 147 TIRPAIINAVERAKDFYGDLNIM-VTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 147 ~~~~~i~~~l~~~~~~~~~~~i~-vTGHSLGGalA~l~a~~l 187 (283)
.+++.+... +.+.+..+-.+|. |.|-||||..|.-.++..
T Consensus 128 ti~D~V~aq-~~ll~~LGI~~l~avvGgSmGGMqaleWa~~y 168 (368)
T COG2021 128 TIRDMVRAQ-RLLLDALGIKKLAAVVGGSMGGMQALEWAIRY 168 (368)
T ss_pred cHHHHHHHH-HHHHHhcCcceEeeeeccChHHHHHHHHHHhC
Confidence 344444333 4555666666776 999999999997777643
No 256
>TIGR01165 cbiN cobalt transport protein. This model describes the cobalt transporter in bacteria and its equivalents in archaea. It principally functions in the ion uptake mechanism. It is a multisubunit transporter with two integral membrane proteins and two closely associated cytoplasmic subunits. This transporter belongs to the ABC transporter superfamily (ATP stands for ATP Binding Cassette). This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=25.15 E-value=66 Score=23.98 Aligned_cols=17 Identities=29% Similarity=0.321 Sum_probs=8.7
Q ss_pred CcchhHHHHHHHHHHHH
Q 023358 1 MGQKKWLILLVFMCLFT 17 (283)
Q Consensus 1 ~~~~~~~~~~~~~~~~~ 17 (283)
|-||+-++|++++.+++
T Consensus 1 m~~~~~~~ll~~v~~l~ 17 (91)
T TIGR01165 1 MSMKKTIWLLAAVAALV 17 (91)
T ss_pred CCcchhHHHHHHHHHHH
Confidence 66776554444443333
No 257
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=25.04 E-value=85 Score=30.74 Aligned_cols=32 Identities=22% Similarity=0.383 Sum_probs=20.5
Q ss_pred HHHHHHHHHcC--CeEEEEeccChhHH-HHHHHhH
Q 023358 154 NAVERAKDFYG--DLNIMVTGHSMGGA-MAAFCGL 185 (283)
Q Consensus 154 ~~l~~~~~~~~--~~~i~vTGHSLGGa-lA~l~a~ 185 (283)
+-+++-.+.++ ..+|.+.|+|-||+ +++|+++
T Consensus 166 kWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~ 200 (491)
T COG2272 166 KWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV 200 (491)
T ss_pred HHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC
Confidence 34444444444 35799999999986 5555554
No 258
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=25.01 E-value=81 Score=29.00 Aligned_cols=17 Identities=41% Similarity=0.485 Sum_probs=12.7
Q ss_pred CCeEEEEeccChhHHHH
Q 023358 164 GDLNIMVTGHSMGGAMA 180 (283)
Q Consensus 164 ~~~~i~vTGHSLGGalA 180 (283)
+..+.++.|||||=--|
T Consensus 83 ~~~p~~~aGHSlGEysA 99 (310)
T COG0331 83 GVKPDFVAGHSLGEYSA 99 (310)
T ss_pred CCCCceeecccHhHHHH
Confidence 45667999999995433
No 259
>PRK10449 heat-inducible protein; Provisional
Probab=24.88 E-value=56 Score=26.16 Aligned_cols=19 Identities=26% Similarity=0.420 Sum_probs=12.4
Q ss_pred chhHHHHHHHHHHHHhhccc
Q 023358 3 QKKWLILLVFMCLFTFSCAR 22 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~ 22 (283)
|||+|+++++..+| ..|+.
T Consensus 1 mk~~~~~~~~~~~l-~~C~~ 19 (140)
T PRK10449 1 MKKVVALVALSLLM-AGCVS 19 (140)
T ss_pred ChhHHHHHHHHHHH-HHhcC
Confidence 78988776555554 45554
No 260
>PRK11443 lipoprotein; Provisional
Probab=24.55 E-value=52 Score=26.02 Aligned_cols=11 Identities=27% Similarity=0.455 Sum_probs=6.8
Q ss_pred chhHHHHHHHH
Q 023358 3 QKKWLILLVFM 13 (283)
Q Consensus 3 ~~~~~~~~~~~ 13 (283)
||+++++++++
T Consensus 1 Mk~~~~~~~~~ 11 (124)
T PRK11443 1 MKKFIAPLLAL 11 (124)
T ss_pred ChHHHHHHHHH
Confidence 67666665544
No 261
>COG5294 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.41 E-value=57 Score=25.23 Aligned_cols=16 Identities=31% Similarity=0.339 Sum_probs=9.4
Q ss_pred chhHHHHHHHHHHHHh
Q 023358 3 QKKWLILLVFMCLFTF 18 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~ 18 (283)
||++|+.++-+.+.++
T Consensus 1 MKkil~~ilall~~ii 16 (113)
T COG5294 1 MKKILIGILALLLIII 16 (113)
T ss_pred CcchHHHHHHHHHHHH
Confidence 7888885544444333
No 262
>PF02553 CbiN: Cobalt transport protein component CbiN; InterPro: IPR003705 The cobalt transport protein CbiN is part of the active cobalt transport system involved in uptake of cobalt in to the cell involved with cobalamin biosynthesis (vitamin B12). It has been suggested that CbiN may function as the periplasmic binding protein component of the active cobalt transport system [].; GO: 0015087 cobalt ion transmembrane transporter activity, 0006824 cobalt ion transport, 0009236 cobalamin biosynthetic process, 0016020 membrane
Probab=24.17 E-value=54 Score=23.50 Aligned_cols=16 Identities=31% Similarity=0.478 Sum_probs=9.3
Q ss_pred chhHHHHHHHHHHHHh
Q 023358 3 QKKWLILLVFMCLFTF 18 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~ 18 (283)
||+++|+++++.|++.
T Consensus 1 ~kn~~l~~~vv~l~~~ 16 (74)
T PF02553_consen 1 MKNLLLLLLVVALAVV 16 (74)
T ss_pred CceeHHHHHHHHHHHH
Confidence 5677666665544444
No 263
>PRK03554 tatA twin arginine translocase protein A; Provisional
Probab=24.17 E-value=64 Score=23.96 Aligned_cols=17 Identities=24% Similarity=0.198 Sum_probs=11.5
Q ss_pred cchhHHHHHHHHHHHHh
Q 023358 2 GQKKWLILLVFMCLFTF 18 (283)
Q Consensus 2 ~~~~~~~~~~~~~~~~~ 18 (283)
|.--|||+++++.|++.
T Consensus 5 G~~eLlIIlvIvLLlFG 21 (89)
T PRK03554 5 SIWQLLIIAVIVVLLFG 21 (89)
T ss_pred cHHHHHHHHHHHHHHhC
Confidence 45567777777766665
No 264
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=24.14 E-value=1.7e+02 Score=25.26 Aligned_cols=37 Identities=16% Similarity=0.210 Sum_probs=24.8
Q ss_pred hHHHHHHHHHHHHHHc--CCeEEEEeccChhHHHHHHHhHH
Q 023358 148 IRPAIINAVERAKDFY--GDLNIMVTGHSMGGAMAAFCGLD 186 (283)
Q Consensus 148 ~~~~i~~~l~~~~~~~--~~~~i~vTGHSLGGalA~l~a~~ 186 (283)
+.+.+...++++..++ ++.+|+|++| ||.+..+++..
T Consensus 155 ~~~Rv~~~l~~~~~~~~~~~~~vlvVsH--g~vir~l~~~~ 193 (228)
T PRK14119 155 TLVRVIPFWTDHISQYLLDGQTVLVSAH--GNSIRALIKYL 193 (228)
T ss_pred HHHHHHHHHHHHHHhhccCCCeEEEEeC--hHHHHHHHHHH
Confidence 3445666666655444 5678999999 57777776643
No 265
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=23.70 E-value=88 Score=27.93 Aligned_cols=21 Identities=29% Similarity=0.158 Sum_probs=15.1
Q ss_pred CCeEEEEeccChhHHHHHHHh
Q 023358 164 GDLNIMVTGHSMGGAMAAFCG 184 (283)
Q Consensus 164 ~~~~i~vTGHSLGGalA~l~a 184 (283)
...+-.+.|||+|=-.|..++
T Consensus 74 g~~P~~v~GhS~GE~aAa~~a 94 (295)
T TIGR03131 74 LPRPSAVAGYSVGEYAAAVVA 94 (295)
T ss_pred CCCCcEEeecCHHHHHHHHHh
Confidence 345668999999986665544
No 266
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=23.24 E-value=70 Score=29.03 Aligned_cols=23 Identities=30% Similarity=0.312 Sum_probs=15.5
Q ss_pred HHcCCeEEEEeccChhHHHHHHH
Q 023358 161 DFYGDLNIMVTGHSMGGAMAAFC 183 (283)
Q Consensus 161 ~~~~~~~i~vTGHSLGGalA~l~ 183 (283)
+..+-.+-.+.|||+|=--|..+
T Consensus 79 ~~~Gi~P~~v~GhSlGE~aA~~a 101 (318)
T PF00698_consen 79 RSWGIKPDAVIGHSLGEYAALVA 101 (318)
T ss_dssp HHTTHCESEEEESTTHHHHHHHH
T ss_pred cccccccceeeccchhhHHHHHH
Confidence 44444556899999997655554
No 267
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=23.14 E-value=1.8e+02 Score=24.37 Aligned_cols=37 Identities=16% Similarity=0.149 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHH-----cCCeEEEEeccChhHHHHHHHhHHh
Q 023358 149 RPAIINAVERAKDF-----YGDLNIMVTGHSMGGAMAAFCGLDL 187 (283)
Q Consensus 149 ~~~i~~~l~~~~~~-----~~~~~i~vTGHSLGGalA~l~a~~l 187 (283)
...+...++++.+. +++.+++|++| ||.+..+++..+
T Consensus 123 ~~R~~~~l~~~~~~~~~~~~~~~~vliVsH--g~~ir~ll~~~l 164 (204)
T TIGR03848 123 QARAVAAVREHDARLAAEHGPDAVWVACSH--GDVIKSVLADAL 164 (204)
T ss_pred HHHHHHHHHHHHHHhhhccCCCCEEEEEeC--ChHHHHHHHHHh
Confidence 33444455544433 35668999999 577766665433
No 268
>PF15330 SIT: SHP2-interacting transmembrane adaptor protein, SIT
Probab=22.95 E-value=48 Score=25.51 Aligned_cols=13 Identities=31% Similarity=0.774 Sum_probs=5.6
Q ss_pred HHHHHHHHHHHHh
Q 023358 6 WLILLVFMCLFTF 18 (283)
Q Consensus 6 ~~~~~~~~~~~~~ 18 (283)
|+|++++..||++
T Consensus 1 w~Ll~il~llLll 13 (107)
T PF15330_consen 1 WLLLGILALLLLL 13 (107)
T ss_pred ChHHHHHHHHHHH
Confidence 3444444444433
No 269
>PRK15396 murein lipoprotein; Provisional
Probab=22.30 E-value=85 Score=22.73 Aligned_cols=19 Identities=16% Similarity=0.186 Sum_probs=12.0
Q ss_pred CcchhHHHHHHHHHHHHhh
Q 023358 1 MGQKKWLILLVFMCLFTFS 19 (283)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~ 19 (283)
|..++++|.++.+++++++
T Consensus 1 m~~~kl~l~av~ls~~LLa 19 (78)
T PRK15396 1 MNRTKLVLGAVILGSTLLA 19 (78)
T ss_pred CchhHHHHHHHHHHHHHHH
Confidence 4455777777777665554
No 270
>cd00553 NAD_synthase NAD+ synthase is a homodimer, which catalyzes the final step in de novo nicotinamide adenine dinucleotide (NAD+) biosynthesis, an amide transfer from either ammonia or glutamine to nicotinic acid adenine dinucleotide (NaAD). The conversion of NaAD to NAD+ occurs via an NAD-adenylate intermediate and requires ATP and Mg2+. The intemediate is subsequently cleaved into NAD+ and AMP. In many prokaryotes, such as E. coli , NAD synthetase consists of a single domain and is strictly ammonia dependent. In contrast, eukaryotes and other prokaryotes have an additional N-terminal amidohydrolase domain that prefer glutamine, Interestingly, NAD+ synthases in these prokaryotes, can also utilize ammonia as an amide source .
Probab=22.15 E-value=3.4e+02 Score=23.67 Aligned_cols=76 Identities=17% Similarity=0.083 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCC--CCHHHHHHHhccCCCEEEEEE
Q 023358 150 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI--GNAAFASYYTQLVPNTFRVTN 227 (283)
Q Consensus 150 ~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prv--gn~~fa~~~~~~~~~~~riv~ 227 (283)
+.+...|++..++.+ .+=++.|-| ||-=+++++..+....+..++.++++..+.. .+...+..+.+..+--+.+++
T Consensus 8 ~~l~~~l~~~~~~~~-~~~vvv~lS-GGiDSs~~a~la~~~~~~~~v~~~~~~~~~~~~~~~~~a~~~a~~lgi~~~~i~ 85 (248)
T cd00553 8 NALVLFLRDYLRKSG-FKGVVLGLS-GGIDSALVAALAVRALGRENVLALFMPSRYSSEETREDAKELAEALGIEHVNID 85 (248)
T ss_pred HHHHHHHHHHHHHhC-CCCEEEeCC-CcHHHHHHHHHHHHHhCcccEEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEec
Confidence 344555555554433 334788888 7766666555444443334666666655422 233444444444433344444
No 271
>PF14060 DUF4252: Domain of unknown function (DUF4252)
Probab=22.07 E-value=49 Score=26.56 Aligned_cols=19 Identities=32% Similarity=0.599 Sum_probs=12.3
Q ss_pred hhHHHHHHHHHHHHhhccc
Q 023358 4 KKWLILLVFMCLFTFSCAR 22 (283)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~ 22 (283)
||++++++++++.+.++.|
T Consensus 1 Kk~i~~l~l~~~~~~~~aq 19 (155)
T PF14060_consen 1 KKIILILLLLLACLASCAQ 19 (155)
T ss_pred ChhHHHHHHHHHHHHHhcc
Confidence 5767666666666666653
No 272
>PRK08384 thiamine biosynthesis protein ThiI; Provisional
Probab=21.91 E-value=1.3e+02 Score=28.49 Aligned_cols=30 Identities=17% Similarity=0.333 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHcCCeEEEEeccChhHHHHHH
Q 023358 152 IINAVERAKDFYGDLNIMVTGHSMGGAMAAF 182 (283)
Q Consensus 152 i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l 182 (283)
+...+.++..+. +.+.++||||||--.++.
T Consensus 272 m~r~a~~iA~~~-g~~~IaTGhslgqvaSQt 301 (381)
T PRK08384 272 MVKHADRIAKEF-GAKGIVMGDSLGQVASQT 301 (381)
T ss_pred HHHHHHHHHHHc-CCCEEEEcccchhHHHHH
Confidence 344444444443 678999999998854443
No 273
>PRK13980 NAD synthetase; Provisional
Probab=21.88 E-value=4e+02 Score=23.52 Aligned_cols=77 Identities=19% Similarity=0.214 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCCC--CHHHHHHHhccCCCEEEEE
Q 023358 149 RPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIG--NAAFASYYTQLVPNTFRVT 226 (283)
Q Consensus 149 ~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prvg--n~~fa~~~~~~~~~~~riv 226 (283)
.+.+...+++...+.+-.+ ++.|=| ||-=+++++..+....+..++.++++..+-.. +...+..+-+..+--++++
T Consensus 14 ~~~l~~~l~~~v~~~g~~~-vvv~lS-GGiDSsv~a~l~~~~~~~~~v~av~~~~~~~~~~~~~~a~~la~~lgi~~~~i 91 (265)
T PRK13980 14 REIIVDFIREEVEKAGAKG-VVLGLS-GGIDSAVVAYLAVKALGKENVLALLMPSSVSPPEDLEDAELVAEDLGIEYKVI 91 (265)
T ss_pred HHHHHHHHHHHHHHcCCCc-EEEECC-CCHHHHHHHHHHHHHhCccceEEEEeeCCCCCHHHHHHHHHHHHHhCCCeEEE
Confidence 3455566666665554334 555777 66555555544444334456777777655322 3334444444333334444
Q ss_pred E
Q 023358 227 N 227 (283)
Q Consensus 227 ~ 227 (283)
+
T Consensus 92 ~ 92 (265)
T PRK13980 92 E 92 (265)
T ss_pred E
Confidence 4
No 274
>PF15240 Pro-rich: Proline-rich
Probab=21.88 E-value=61 Score=27.30 Aligned_cols=15 Identities=33% Similarity=0.259 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHhhc
Q 023358 6 WLILLVFMCLFTFSC 20 (283)
Q Consensus 6 ~~~~~~~~~~~~~~~ 20 (283)
|||||-+++|.|.+|
T Consensus 2 LlVLLSvALLALSSA 16 (179)
T PF15240_consen 2 LLVLLSVALLALSSA 16 (179)
T ss_pred hhHHHHHHHHHhhhc
Confidence 455555554444444
No 275
>TIGR02052 MerP mercuric transport protein periplasmic component. This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403).
Probab=21.68 E-value=64 Score=22.25 Aligned_cols=16 Identities=31% Similarity=0.416 Sum_probs=9.6
Q ss_pred chhHHHHHHHHHHHHh
Q 023358 3 QKKWLILLVFMCLFTF 18 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~ 18 (283)
||+++-|++++-+++.
T Consensus 1 ~~~~~~~~~~~~~~~~ 16 (92)
T TIGR02052 1 MKKLATLLALFVLTSL 16 (92)
T ss_pred ChhHHHHHHHHHHhcc
Confidence 7888766555444444
No 276
>cd07185 OmpA_C-like Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.
Probab=21.63 E-value=1.2e+02 Score=22.15 Aligned_cols=23 Identities=17% Similarity=0.206 Sum_probs=16.5
Q ss_pred HHHHHHHHcCCeEEEEeccChhH
Q 023358 155 AVERAKDFYGDLNIMVTGHSMGG 177 (283)
Q Consensus 155 ~l~~~~~~~~~~~i~vTGHSLGG 177 (283)
.+....+.+++++|.|.||+=..
T Consensus 23 ~~~~~l~~~~~~~v~v~g~a~~~ 45 (106)
T cd07185 23 KLAEVLKKNPDAKIRIEGHTDSR 45 (106)
T ss_pred HHHHHHHHCCCceEEEEEEeCCC
Confidence 34445556788899999999543
No 277
>PF03823 Neurokinin_B: Neurokinin B; InterPro: IPR003635 Tachykinins [, , ] are a group of biologically active peptides which excite neurons, evoke behavioral responses, are potent vasodilatators and contract (directly or indirectly) many smooth muscles. This family includes neurokinins, as well as many other peptides. Like other tachykinins, neurokinins are synthesized as larger protein precursors that are enzymatically converted to their mature forms.; GO: 0007217 tachykinin receptor signaling pathway
Probab=21.63 E-value=89 Score=21.06 Aligned_cols=16 Identities=13% Similarity=0.167 Sum_probs=11.1
Q ss_pred chhHHHHHHHHHHHHh
Q 023358 3 QKKWLILLVFMCLFTF 18 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~ 18 (283)
||+-|+|++++.|-+.
T Consensus 1 MR~~lLf~aiLalsla 16 (59)
T PF03823_consen 1 MRSTLLFAAILALSLA 16 (59)
T ss_pred ChhHHHHHHHHHHHHH
Confidence 6877877776666554
No 278
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=21.51 E-value=1.2e+02 Score=26.60 Aligned_cols=83 Identities=14% Similarity=0.129 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHHhhhhc----CCcceE-EEEecCCCCCCHHHH-HHHhccC-CC
Q 023358 149 RPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNL----GIQNVQ-VMTFGQPRIGNAAFA-SYYTQLV-PN 221 (283)
Q Consensus 149 ~~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~l~~~~----~~~~v~-~~tFg~Prvgn~~fa-~~~~~~~-~~ 221 (283)
.++.++.|.+...+++.++ =+.|.|.|++||.+++. +.+.. +.+.++ ++-++.-+...+.+. .++.... -.
T Consensus 88 ~eesl~yl~~~i~enGPFD-GllGFSQGA~laa~l~~-~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~~~~~~~~~i~~P 165 (230)
T KOG2551|consen 88 FEESLEYLEDYIKENGPFD-GLLGFSQGAALAALLAG-LGQKGLPYVKQPPFKFAVFISGFKFPSKKLDESAYKRPLSTP 165 (230)
T ss_pred hHHHHHHHHHHHHHhCCCc-cccccchhHHHHHHhhc-ccccCCcccCCCCeEEEEEEecCCCCcchhhhhhhccCCCCC
Confidence 3455666666666654322 36799999999998887 22211 123333 555555555433333 3333222 24
Q ss_pred EEEEEECCCccC
Q 023358 222 TFRVTNYHDIVP 233 (283)
Q Consensus 222 ~~riv~~~D~VP 233 (283)
.++|.-+.|-|-
T Consensus 166 SLHi~G~~D~iv 177 (230)
T KOG2551|consen 166 SLHIFGETDTIV 177 (230)
T ss_pred eeEEecccceee
Confidence 677777777643
No 279
>PF11777 DUF3316: Protein of unknown function (DUF3316); InterPro: IPR016879 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=21.46 E-value=74 Score=24.50 Aligned_cols=14 Identities=29% Similarity=0.370 Sum_probs=9.1
Q ss_pred chhHHHHHHHHHHH
Q 023358 3 QKKWLILLVFMCLF 16 (283)
Q Consensus 3 ~~~~~~~~~~~~~~ 16 (283)
|||+++|++++++-
T Consensus 1 MKk~~ll~~~ll~s 14 (114)
T PF11777_consen 1 MKKIILLASLLLLS 14 (114)
T ss_pred CchHHHHHHHHHHH
Confidence 78888877444433
No 280
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=21.42 E-value=1.9e+02 Score=26.71 Aligned_cols=56 Identities=16% Similarity=0.169 Sum_probs=38.4
Q ss_pred hHHHHHHHHHHHHHHcC----CeEEEEeccChhHHHHHHHhHHhhhhcCCcceEEEEecCCCC
Q 023358 148 IRPAIINAVERAKDFYG----DLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI 206 (283)
Q Consensus 148 ~~~~i~~~l~~~~~~~~----~~~i~vTGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~Prv 206 (283)
....+++.+...+++.| .++|.|.|-|-|=+||+-.++-+. +..+.--+.|--|..
T Consensus 20 Ce~nV~~QI~y~k~~gp~~ngPKkVLviGaSsGyGLa~RIsaaFG---~gAdTiGVffE~pgt 79 (398)
T COG3007 20 CEANVLQQIDYVKAAGPIKNGPKKVLVIGASSGYGLAARISAAFG---PGADTIGVFFERPGT 79 (398)
T ss_pred HHHHHHHHHHHHHhcCCccCCCceEEEEecCCcccHHHHHHHHhC---CCCceeeEEeecCCc
Confidence 34567777777766654 689999999999999988776543 233344456666655
No 281
>PRK04598 tatA twin arginine translocase protein A; Provisional
Probab=21.26 E-value=79 Score=23.07 Aligned_cols=17 Identities=24% Similarity=0.198 Sum_probs=11.4
Q ss_pred cchhHHHHHHHHHHHHh
Q 023358 2 GQKKWLILLVFMCLFTF 18 (283)
Q Consensus 2 ~~~~~~~~~~~~~~~~~ 18 (283)
|.--|||+++++.|++.
T Consensus 5 g~~elliIlvivlllFG 21 (81)
T PRK04598 5 SIWQLLIIAVIVVLLFG 21 (81)
T ss_pred cHHHHHHHHHHHHHHhC
Confidence 45567777777776665
No 282
>PRK13838 conjugal transfer pilin processing protease TraF; Provisional
Probab=21.24 E-value=75 Score=26.62 Aligned_cols=23 Identities=22% Similarity=0.281 Sum_probs=17.6
Q ss_pred CcchhHHHHHHHHHHHHhhcccc
Q 023358 1 MGQKKWLILLVFMCLFTFSCARE 23 (283)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~ 23 (283)
|-+||+++++++++++++.....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~ 23 (176)
T PRK13838 1 MRRRRALLLLAVAAVAASGLAAT 23 (176)
T ss_pred CCcchHHHHHHHHHHHHHHHHHH
Confidence 66788888888888888765443
No 283
>PRK10523 lipoprotein involved with copper homeostasis and adhesion; Provisional
Probab=20.58 E-value=76 Score=27.99 Aligned_cols=18 Identities=17% Similarity=-0.079 Sum_probs=12.6
Q ss_pred chhHHHHHHHHHHHHhhc
Q 023358 3 QKKWLILLVFMCLFTFSC 20 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~ 20 (283)
|||+++++++++.++...
T Consensus 2 mkk~~~~~~~a~~l~~l~ 19 (234)
T PRK10523 2 MKKAIITALAAAGLFTLM 19 (234)
T ss_pred chHHHHHHHHHHHHHHhh
Confidence 788888887776665543
No 284
>PRK13792 lysozyme inhibitor; Provisional
Probab=20.55 E-value=68 Score=25.51 Aligned_cols=21 Identities=29% Similarity=0.365 Sum_probs=12.1
Q ss_pred chhHHHHHHHHHHHHh-hcccc
Q 023358 3 QKKWLILLVFMCLFTF-SCARE 23 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~-~~~~~ 23 (283)
|||.|++|++...+++ .+++.
T Consensus 1 mk~~l~~ll~~~~~lLsaCs~~ 22 (127)
T PRK13792 1 MKKALWLLLAAVPVVLVACGGS 22 (127)
T ss_pred ChhHHHHHHHHHHhheecccCC
Confidence 6666555555544444 56776
No 285
>PF11153 DUF2931: Protein of unknown function (DUF2931); InterPro: IPR021326 Some members in this family of proteins are annotated as lipoproteins however this cannot be confirmed. Currently, there is no known function.
Probab=20.54 E-value=67 Score=27.60 Aligned_cols=19 Identities=37% Similarity=0.630 Sum_probs=11.0
Q ss_pred chhHHHHHHHHHHHHhhcccc
Q 023358 3 QKKWLILLVFMCLFTFSCARE 23 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~ 23 (283)
||++|+|+ +||++.+|...
T Consensus 1 mk~i~~l~--l~lll~~C~~~ 19 (216)
T PF11153_consen 1 MKKILLLL--LLLLLTGCSTN 19 (216)
T ss_pred ChHHHHHH--HHHHHHhhcCC
Confidence 67766665 55555555443
No 286
>COG3771 Predicted membrane protein [Function unknown]
Probab=20.38 E-value=1e+02 Score=22.80 Aligned_cols=17 Identities=24% Similarity=0.508 Sum_probs=13.6
Q ss_pred chhHHHHHHHHHHHHhh
Q 023358 3 QKKWLILLVFMCLFTFS 19 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~~ 19 (283)
||-+|++++++.+|+++
T Consensus 1 mKyil~~vlvlaiflia 17 (97)
T COG3771 1 MKYILIFVLVLAIFLIA 17 (97)
T ss_pred ChhHHHHHHHHHHHHHH
Confidence 67788888888888775
No 287
>PF13627 LPAM_2: Prokaryotic lipoprotein-attachment site
Probab=20.24 E-value=1.1e+02 Score=16.95 Aligned_cols=12 Identities=17% Similarity=0.382 Sum_probs=6.4
Q ss_pred HHHHHHhhcccc
Q 023358 12 FMCLFTFSCARE 23 (283)
Q Consensus 12 ~~~~~~~~~~~~ 23 (283)
..++.+..+||-
T Consensus 7 ~~~~~LsgCG~K 18 (24)
T PF13627_consen 7 ALALALSGCGQK 18 (24)
T ss_pred HHHHHHHhcccC
Confidence 334444567875
No 288
>PF00879 Defensin_propep: Defensin propeptide The pattern for this Prosite entry doesn't match the propeptide.; InterPro: IPR002366 Defensins are 2-6 kDa, cationic, microbicidal peptides active against many Gram-negative and Gram-positive bacteria, fungi, and enveloped viruses [], containing three pairs of intramolecular disulphide bonds []. On the basis of their size and pattern of disulphide bonding, mammalian defensins are classified into alpha, beta and theta categories. Alpha-defensins, which have been identified in humans, monkeys and several rodent species, are particularly abundant in neutrophils, certain macrophage populations and Paneth cells of the small intestine. Every mammalian species explored thus far has beta-defensins. In cows, as many as 13 beta-defensins exist in neutrophils. However, in other species, beta-defensins are more often produced by epithelial cells lining various organs (e.g. the epidermis, bronchial tree and genitourinary tract). Theta-defensins are cyclic and have so far only been identified in primate phagocytes. Defensins are produced constitutively and/or in response to microbial products or proinflammatory cytokines. Some defensins are also called corticostatins (CS) because they inhibit corticotropin-stimulated corticosteroid production. The mechanism(s) by which microorganisms are killed and/or inactivated by defensins is not understood completely. However, it is generally believed that killing is a consequence of disruption of the microbial membrane. The polar topology of defensins, with spatially separated charged and hydrophobic regions, allows them to insert themselves into the phospholipid membranes so that their hydrophobic regions are buried within the lipid membrane interior and their charged (mostly cationic) regions interact with anionic phospholipid head groups and water. Subsequently, some defensins can aggregate to form `channel-like' pores; others might bind to and cover the microbial membrane in a `carpet-like' manner. The net outcome is the disruption of membrane integrity and function, which ultimately leads to the lysis of microorganisms. Some defensins are synthesized as propeptides which may be relevant to this process - in neutrophils only the mature peptides have been identified but in Paneth cells, the propeptide is stored in vesicles [] and appears to be cleaved by trypsin on activation. ; GO: 0006952 defense response
Probab=20.24 E-value=1.1e+02 Score=20.30 Aligned_cols=17 Identities=12% Similarity=0.155 Sum_probs=9.4
Q ss_pred chhHHHHHHHHHHHHhh
Q 023358 3 QKKWLILLVFMCLFTFS 19 (283)
Q Consensus 3 ~~~~~~~~~~~~~~~~~ 19 (283)
||.+.||+.+++|-+-+
T Consensus 1 MRTL~LLaAlLLlAlqa 17 (52)
T PF00879_consen 1 MRTLALLAALLLLALQA 17 (52)
T ss_pred CcHHHHHHHHHHHHHHH
Confidence 67766666644443333
No 289
>COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism]
Probab=20.06 E-value=2.1e+02 Score=25.91 Aligned_cols=55 Identities=20% Similarity=0.277 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhHH-hhhhcCCcceEEEEecCCCCCCH
Q 023358 152 IINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLD-LTVNLGIQNVQVMTFGQPRIGNA 209 (283)
Q Consensus 152 i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~~-l~~~~~~~~v~~~tFg~Prvgn~ 209 (283)
...+|+.+.+.+-.|-.++|.=-.||.-|+.+.+- +.. ..+=-.+.|+.|||=.+
T Consensus 184 tsaAl~~l~ea~lpyIsVLt~PTtGGVsASfA~lGDi~i---AEP~AlIGFAGpRVIEQ 239 (294)
T COG0777 184 TSAALKRLSEAGLPYISVLTDPTTGGVSASFAMLGDIII---AEPGALIGFAGPRVIEQ 239 (294)
T ss_pred HHHHHHHHHhcCCceEEEecCCCccchhHhHHhccCeee---cCcccccccCcchhhhh
Confidence 34455555555556888999999999999887751 110 11224799999999443
No 290
>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease. Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec
Probab=20.03 E-value=2.7e+02 Score=22.14 Aligned_cols=36 Identities=14% Similarity=0.105 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEEeccChhHHHHHHHhH
Q 023358 150 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGL 185 (283)
Q Consensus 150 ~~i~~~l~~~~~~~~~~~i~vTGHSLGGalA~l~a~ 185 (283)
.++.+.++++.+..+-..|++...|.||.++....+
T Consensus 14 ~~l~~~l~~a~~d~~~~~ivl~~~s~Gg~~~~~~~i 49 (161)
T cd00394 14 DQLAAQIRFAEADNSVKAIVLEVNTPGGRVDAGMNI 49 (161)
T ss_pred HHHHHHHHHHHhCCCCceEEEEEECCCcCHHHHHHH
Confidence 455566665544433466777788888876655433
Done!