BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>023360
MEEALRQIACTSSAGMDTQRRYSAGLGFVNKQSHEHQHHGGFVEMKKKEKVGSIKKKLKL
LKGLSKDLSTFSQMGFAVDQDQNLLAQVRGKMISEAAEVLMKQLEQLKTEEKKLKRKRKQ
EKANKLKAKIQSSACESSDSSDSECEEEEVVQMIDGTQVEDGLLNLMPVIRSEESSPSPN
VVGTDDGMTKRVEVCMGNKCKKSGGGALFEEFQRAMGAEGDVVACKCMGKCRDGPNVRLF
HSDAYHHLTPPNPLCIGVALEDVGAIVGNLFTQGSKSLELGLR

High Scoring Gene Products

Symbol, full name Information P value
DGAT3
AT1G48300 		protein from Arabidopsis thaliana 2.5e-28

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  023360
        (283 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2007750 - symbol:DGAT3 "AT1G48300" species:370...   258  2.5e-28   2


>TAIR|locus:2007750 [details] [associations]
            symbol:DGAT3 "AT1G48300" species:3702 "Arabidopsis
            thaliana" [GO:0004144 "diacylglycerol O-acyltransferase activity"
            evidence=IGI] [GO:0005829 "cytosol" evidence=IDA] [GO:0008152
            "metabolic process" evidence=IGI] [GO:0019432 "triglyceride
            biosynthetic process" evidence=IMP] EMBL:CP002684 GO:GO:0005829
            GO:GO:0004144 Gene3D:3.40.30.10 InterPro:IPR012336 GO:GO:0019432
            UniGene:At.38447 UniGene:At.71075 EMBL:AF344322 IPI:IPI00526125
            RefSeq:NP_175264.2 ProteinModelPortal:Q9C5W0
            EnsemblPlants:AT1G48300.1 GeneID:841250 KEGG:ath:AT1G48300
            OMA:CRDGPNV ProtClustDB:CLSN2690446 Genevestigator:Q9C5W0
            Uniprot:Q9C5W0
        Length = 285

 Score = 258 (95.9 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
 Identities = 55/96 (57%), Positives = 63/96 (65%)

Query:   191 RVEVCMGNKCKKSGGGALFEEFQRAM-GAEGDVVACKCMGKCRDGPNVRLF-HSDAYHH- 247
             RVEVCMG KCK+SGG  L +EFQRAM G EG  VACKCMGKCRDGPNVR+   +DA    
Sbjct:   186 RVEVCMGGKCKRSGGALLLDEFQRAMTGFEGSAVACKCMGKCRDGPNVRVVKETDAVMTD 245

Query:   248 --LTPPNPLCIGVALEDVGAIVGNLFTQGSKSLELG 281
                TP   LC+GV L+DV  IV + F +      LG
Sbjct:   246 SVRTPSKTLCVGVGLQDVETIVTSFFDEECSREGLG 281

 Score = 73 (30.8 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
 Identities = 13/31 (41%), Positives = 22/31 (70%)

Query:    71 FSQMGFAVDQDQNLLAQVRGKMISEAAEVLM 101
             FS +GF +D +  L+ +++ K ISEA E+L+
Sbjct:    25 FSSIGFGLDPEAGLVGEIQTKTISEATEILV 55


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      283       213   0.00084  112 3  11 22  0.37    33
                                                     31  0.49    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  582 (62 KB)
  Total size of DFA:  158 KB (2094 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.26u 0.11s 15.37t   Elapsed:  00:00:00
  Total cpu time:  15.26u 0.11s 15.37t   Elapsed:  00:00:00
  Start:  Thu May  9 22:40:15 2013   End:  Thu May  9 22:40:15 2013

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