Your job contains 1 sequence.
>023363
MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNHSSSATTTNDDNNNGAQPRVYGCVIGI
QRGRTVEIFNSFELLYDPSTHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMH
IHKALMDINESPVYVLLNPSINPAQKDLPVTIFESELHVIEGIPQLIFVRSSYTIETVEA
ERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIPCEN
SLLRQVSSLLRRLPAIESEKFQDDFLMVSLFSSFLNIFTIFYH
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023363
(283 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2177601 - symbol:CSN6A "AT5G56280" species:370... 1064 1.3e-107 1
TAIR|locus:2131493 - symbol:CSN6B "AT4G26430" species:370... 1040 4.6e-105 1
DICTYBASE|DDB_G0293180 - symbol:csn6 "Mov34/MPN/PAD-1 fam... 519 7.4e-50 1
ZFIN|ZDB-GENE-050417-289 - symbol:cops6 "COP9 constitutiv... 489 1.1e-46 1
UNIPROTKB|F1MG10 - symbol:COPS6 "COP9 signalosome complex... 475 3.4e-45 1
UNIPROTKB|A7TX81 - symbol:COPS6 "COP9 signalosome complex... 475 3.4e-45 1
MGI|MGI:1349439 - symbol:Cops6 "COP9 (constitutive photom... 475 3.4e-45 1
UNIPROTKB|A6QQ21 - symbol:COPS6 "COP9 signalosome complex... 474 4.4e-45 1
RGD|1309919 - symbol:Cops6 "COP9 signalosome subunit 6" s... 474 4.4e-45 1
UNIPROTKB|E7EM64 - symbol:COPS6 "COP9 signalosome complex... 470 1.2e-44 1
UNIPROTKB|Q7L5N1 - symbol:COPS6 "COP9 signalosome complex... 470 1.2e-44 1
FB|FBgn0028837 - symbol:CSN6 "COP9 complex homolog subuni... 428 3.3e-40 1
TAIR|locus:2166449 - symbol:RPN8A "AT5G05780" species:370... 225 1.1e-18 1
POMBASE|SPCC1682.10 - symbol:rpn8 "19S proteasome regulat... 198 2.2e-18 2
TAIR|locus:2074653 - symbol:MEE34 "AT3G11270" species:370... 215 1.2e-17 1
ZFIN|ZDB-GENE-030131-5541 - symbol:psmd7 "proteasome (pro... 200 7.8e-16 1
ASPGD|ASPL0000029143 - symbol:AN5121 species:162425 "Emer... 200 1.1e-15 1
UNIPROTKB|P51665 - symbol:PSMD7 "26S proteasome non-ATPas... 195 2.8e-15 1
UNIPROTKB|Q3ZBD0 - symbol:PSMD7 "26S proteasome non-ATPas... 194 3.6e-15 1
MGI|MGI:1351511 - symbol:Psmd7 "proteasome (prosome, macr... 192 6.0e-15 1
UNIPROTKB|G4NCJ9 - symbol:MGG_01059 "26S proteasome regul... 193 7.4e-15 1
RGD|1306902 - symbol:Psmd7 "proteasome (prosome, macropai... 191 1.6e-14 1
DICTYBASE|DDB_G0293254 - symbol:eif3F "eukaryotic transla... 161 5.0e-14 2
DICTYBASE|DDB_G0279633 - symbol:psmD7 "26S proteasome non... 189 5.6e-14 1
WB|WBGene00004464 - symbol:rpn-8 species:6239 "Caenorhabd... 188 1.7e-13 1
UNIPROTKB|O61792 - symbol:rpn-8 "Protein RPN-8" species:6... 188 1.7e-13 1
FB|FBgn0002787 - symbol:Rpn8 "Regulatory particle non-ATP... 187 2.0e-13 1
WB|WBGene00000818 - symbol:csn-6 species:6239 "Caenorhabd... 186 6.1e-13 1
ASPGD|ASPL0000051695 - symbol:csnF species:162425 "Emeric... 183 1.5e-12 1
UNIPROTKB|E1BLZ8 - symbol:EIF3F "Uncharacterized protein"... 173 4.0e-11 1
CGD|CAL0002371 - symbol:RPN8 species:5476 "Candida albica... 170 6.4e-11 1
UNIPROTKB|Q59YL2 - symbol:RPN8 "Likely 26S proteasome reg... 170 6.4e-11 1
UNIPROTKB|O00303 - symbol:EIF3F "Eukaryotic translation i... 170 8.1e-11 1
UNIPROTKB|A5A6I3 - symbol:EIF3F "Eukaryotic translation i... 170 8.3e-11 1
UNIPROTKB|Q4R5B8 - symbol:EIF3F "Eukaryotic translation i... 170 8.3e-11 1
UNIPROTKB|E1C050 - symbol:EIF3F "Uncharacterized protein"... 169 8.6e-11 1
UNIPROTKB|B3KSH1 - symbol:EIF3F "HCG1784554, isoform CRA_... 170 9.1e-11 1
MGI|MGI:1913335 - symbol:Eif3f "eukaryotic translation in... 166 2.7e-10 1
SGD|S000005787 - symbol:RPN8 "non-ATPase regulatory subun... 154 7.1e-09 1
UNIPROTKB|G4MZL5 - symbol:MGG_01432 "Uncharacterized prot... 116 6.7e-07 3
UNIPROTKB|B4DEW9 - symbol:EIF3F "Eukaryotic translation i... 130 9.7e-07 1
UNIPROTKB|B4DXI8 - symbol:PSMD7 "26S proteasome non-ATPas... 132 1.3e-06 1
TAIR|locus:2061206 - symbol:EIF2 "AT2G39990" species:3702... 133 1.6e-06 1
>TAIR|locus:2177601 [details] [associations]
symbol:CSN6A "AT5G56280" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=TAS] [GO:0030163 "protein
catabolic process" evidence=TAS] [GO:0008180 "signalosome"
evidence=TAS;IPI] [GO:0009640 "photomorphogenesis"
evidence=RCA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IMP] [GO:0010387 "signalosome assembly" evidence=IMP]
[GO:0009165 "nucleotide biosynthetic process" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA] [GO:0043248 "proteasome assembly" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0007275
GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006511
GO:GO:0009585 GO:GO:0008180 eggNOG:COG1310 GO:GO:0010387
EMBL:AY048692 EMBL:AF395063 EMBL:AB026656 EMBL:BT004034
IPI:IPI00519357 RefSeq:NP_568839.1 UniGene:At.20191
ProteinModelPortal:Q8W206 SMR:Q8W206 IntAct:Q8W206 STRING:Q8W206
PaxDb:Q8W206 PRIDE:Q8W206 EnsemblPlants:AT5G56280.1 GeneID:835727
KEGG:ath:AT5G56280 TAIR:At5g56280 HOGENOM:HOG000253002
InParanoid:Q8W206 KO:K12179 OMA:IGKQKGR PhylomeDB:Q8W206
ProtClustDB:CLSN2689622 Genevestigator:Q8W206 GermOnline:AT5G56280
InterPro:IPR024969 Pfam:PF13012 Uniprot:Q8W206
Length = 317
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 211/272 (77%), Positives = 228/272 (83%)
Query: 1 MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGA-----QPRVYG 55
MA SSSSGLTFKLHPLVIVNISDHYTRVK+Q+N +S G PRVYG
Sbjct: 1 MAPSSSSGLTFKLHPLVIVNISDHYTRVKTQLNPPASICASGHGSNNGEAMFQQNPRVYG 60
Query: 56 CVIGIQRGRTVEIFNSFELLYDPSTHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQ 115
CVIG+QRGRTVEIFNSFELLYDPST +LDR+FLEKKQELYKKVFP FYILGWYSTGSDA+
Sbjct: 61 CVIGVQRGRTVEIFNSFELLYDPSTQTLDRSFLEKKQELYKKVFPDFYILGWYSTGSDAE 120
Query: 116 ESDMHIHKALMDINESPVYVLLNPSINPAQKDLPVTIFESELHVIEGIPQLIFVRSSYTI 175
ESDMHIHKALMDINESPVYVLLNP+IN QKDLPVTI+ESELHVI+GIPQLIF +SYTI
Sbjct: 121 ESDMHIHKALMDINESPVYVLLNPAINHTQKDLPVTIYESELHVIDGIPQLIFAHTSYTI 180
Query: 176 ETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGE 235
ETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVL+ L AMQKG+
Sbjct: 181 ETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQNLAAMQKGD 240
Query: 236 IPCENXXXXXXXXXXXXXPAIESEKFQDDFLM 267
C+N PA+ESE+FQD+FLM
Sbjct: 241 KSCDNSVLRQVSSLLRRLPAMESERFQDNFLM 272
>TAIR|locus:2131493 [details] [associations]
symbol:CSN6B "AT4G26430" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
"extracellular region" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0010387 "signalosome assembly" evidence=IMP] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0000338 "protein deneddylation"
evidence=TAS] [GO:0008180 "signalosome" evidence=IPI]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0007275
GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009585
EMBL:AL161565 EMBL:AL022223 GO:GO:0008180 eggNOG:COG1310
GO:GO:0000338 GO:GO:0010387 HOGENOM:HOG000253002 KO:K12179
ProtClustDB:CLSN2689622 InterPro:IPR024969 Pfam:PF13012
EMBL:AF434762 EMBL:AF395064 EMBL:AY080638 EMBL:BT002345
EMBL:AY087556 IPI:IPI00531332 PIR:T05061 RefSeq:NP_567746.1
UniGene:At.26288 UniGene:At.28451 UniGene:At.75239
ProteinModelPortal:Q8W1P0 SMR:Q8W1P0 IntAct:Q8W1P0 STRING:Q8W1P0
PaxDb:Q8W1P0 PRIDE:Q8W1P0 EnsemblPlants:AT4G26430.1 GeneID:828749
KEGG:ath:AT4G26430 TAIR:At4g26430 InParanoid:Q8W1P0 OMA:AMITNCT
PhylomeDB:Q8W1P0 Genevestigator:Q8W1P0 GermOnline:AT4G26430
Uniprot:Q8W1P0
Length = 317
Score = 1040 (371.2 bits), Expect = 4.6e-105, P = 4.6e-105
Identities = 208/287 (72%), Positives = 234/287 (81%)
Query: 1 MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNH-SSSAXXXXXXXXXGAQ----PRVYG 55
MA SSSSGLTFKLHPLV++NISDH+TRVK+Q+N ++S A PRVYG
Sbjct: 1 MAPSSSSGLTFKLHPLVMLNISDHFTRVKTQLNPPAASCATGNGSNNADAMLLQNPRVYG 60
Query: 56 CVIGIQRGRTVEIFNSFELLYDPSTHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQ 115
CVIG+QRGRTVEIFNSFEL++DP+ +LDR+FLEKKQELYKKVFP FY+LGWYSTGSDA
Sbjct: 61 CVIGLQRGRTVEIFNSFELIFDPALDTLDRSFLEKKQELYKKVFPDFYVLGWYSTGSDAT 120
Query: 116 ESDMHIHKALMDINESPVYVLLNPSINPAQKDLPVTIFESELHVIEGIPQLIFVRSSYTI 175
ESDMHIHKALMDINESPVYVLLNP+IN AQKDLPVTI+ESE HVI+GIPQ IFV +SYTI
Sbjct: 121 ESDMHIHKALMDINESPVYVLLNPAINHAQKDLPVTIYESEFHVIDGIPQSIFVHTSYTI 180
Query: 176 ETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGE 235
ETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVL+ ++VAMQKG+
Sbjct: 181 ETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQHIVAMQKGD 240
Query: 236 IPCENXXXXXXXXXXXXXPAIESEKFQDDFLMV---SLFSSFLNIFT 279
PCEN PA ESEKF ++FLM L S+L + T
Sbjct: 241 KPCENSVLRQVSSLLRSLPAAESEKFNENFLMEYNDKLLMSYLAMIT 287
>DICTYBASE|DDB_G0293180 [details] [associations]
symbol:csn6 "Mov34/MPN/PAD-1 family protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IEA;IDA] [GO:0008180 "signalosome"
evidence=IEA;ISS;IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 dictyBase:DDB_G0293180 GO:GO:0045335
GenomeReviews:CM000155_GR GO:GO:0008180 eggNOG:COG1310
EMBL:AAFI02000199 KO:K12179 OMA:IGKQKGR InterPro:IPR024969
Pfam:PF13012 EMBL:DQ309434 RefSeq:XP_629327.1
ProteinModelPortal:Q54C92 STRING:Q54C92 PRIDE:Q54C92
EnsemblProtists:DDB0233105 GeneID:8629051 KEGG:ddi:DDB_G0293180
ProtClustDB:CLSZ2429325 Uniprot:Q54C92
Length = 309
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 111/266 (41%), Positives = 162/266 (60%)
Query: 3 SSSSSGLTFKLHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQR 62
S++SSGL LHPLV++NISDH+TR K Q N+ + RV G ++G+Q
Sbjct: 20 SANSSGLEVDLHPLVLINISDHFTRTKVQSNYQDNC-------------RVIGVILGVQN 66
Query: 63 GRTVEIFNSFELLYDPSTHSL--DRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMH 120
GR VEI NSFE++Y L D +L KK Y+++FP + +LGWYSTGS + D+
Sbjct: 67 GRNVEICNSFEMVYATVDKQLVLDIEYLRKK---YEQLFPLYDLLGWYSTGSQVSKDDIL 123
Query: 121 IHKALMDINESPVYVLLNPSINPAQKDLPVTIFESELHVIEGIPQLIFVRSSYTIETVEA 180
+HK + + NESP+Y++L+ +P KDLPV I+ESELH++ P IFV++ Y I+T EA
Sbjct: 124 LHKQISEHNESPLYLMLDTD-SPKSKDLPVIIYESELHIVNDEPTTIFVKTPYKIQTGEA 182
Query: 181 ERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIPCEN 240
ERI V+H+A + PS GS + L +HL +H+AI MLN R++ L YL A+++ +P E
Sbjct: 183 ERIGVNHIAKVTPS--GSEGSGLTSHLFTMHNAISMLNIRVKALSDYLQAVKEKRLPYEQ 240
Query: 241 XXXXXXXXXXXXXPAIESEKFQDDFL 266
P I++ F+ +L
Sbjct: 241 NILRKASSLCNQLPTIDTHDFKKSYL 266
>ZFIN|ZDB-GENE-050417-289 [details] [associations]
symbol:cops6 "COP9 constitutive photomorphogenic
homolog subunit 6 (Arabidopsis)" species:7955 "Danio rerio"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0060026 "convergent
extension" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0021551 "central nervous system morphogenesis"
evidence=IMP] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
ZFIN:ZDB-GENE-050417-289 GO:GO:0007420 GO:GO:0009953 GO:GO:0060026
GO:GO:0021551 KO:K12179 InterPro:IPR024969 Pfam:PF13012 CTD:10980
HOVERGEN:HBG107770 EMBL:BC093188 IPI:IPI00570094
RefSeq:NP_001017768.1 UniGene:Dr.42675 ProteinModelPortal:Q567F8
PRIDE:Q567F8 GeneID:550465 KEGG:dre:550465 NextBio:20879709
Uniprot:Q567F8
Length = 297
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 107/268 (39%), Positives = 156/268 (58%)
Query: 1 MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGI 60
MAS + ++ LHPLVI+NISDH+ R++SQ G +V G +IG
Sbjct: 1 MASGVTGSVSVALHPLVILNISDHWIRIRSQ---------------EGRAVQVVGALIGK 45
Query: 61 QRGRTVEIFNSFELLY---DPSTHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQES 117
Q GR +E+ NSFELL+ + H +D+ + K+E +K+VF LGWY+TG +S
Sbjct: 46 QEGRNIEVMNSFELLFHTVEDQIH-IDKEYYYTKEEQFKQVFKEMEFLGWYTTGGSPDQS 104
Query: 118 DMHIHKALMDINESPVYVLLNPSINPAQKDLPVTIFESELHVIEGIPQLIFVRSSYTIET 177
D+HIHK + +I ESP+++ LNP DLPV++FES + +I G ++F YT+ T
Sbjct: 105 DIHIHKQVCEIIESPLFLKLNPMTK--HTDLPVSVFESVIDIISGEATMLFAELPYTLAT 162
Query: 178 VEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIP 237
EAERI VDHVA + + G +T +A HL HSAIKML+SR++V+ Y+ A+Q GE+P
Sbjct: 163 EEAERIGVDHVARMTATGTGENST-VAEHLIAQHSAIKMLHSRVKVILEYVKAVQAGEVP 221
Query: 238 CENXXXXXXXXXXXXXPAIESEKFQDDF 265
+ P + + KF+ DF
Sbjct: 222 FNHEILREANALCHRLPVLNTLKFKTDF 249
>UNIPROTKB|F1MG10 [details] [associations]
symbol:COPS6 "COP9 signalosome complex subunit 6"
species:9913 "Bos taurus" [GO:0010388 "cullin deneddylation"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0008180
GO:GO:0010388 OMA:IGKQKGR InterPro:IPR024969 Pfam:PF13012
IPI:IPI00867272 UniGene:Bt.52796 GeneTree:ENSGT00530000063075
EMBL:DAAA02058286 PRIDE:F1MG10 Ensembl:ENSBTAT00000003725
Uniprot:F1MG10
Length = 324
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 103/267 (38%), Positives = 153/267 (57%)
Query: 1 MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGI 60
MAS + ++ LHPLVI+NISDH+ R++SQ G +V G +IG
Sbjct: 28 MASGVTGSVSVALHPLVILNISDHWIRMRSQ---------------EGRPMQVIGALIGK 72
Query: 61 QRGRTVEIFNSFELLYDPSTHSL--DRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESD 118
Q GR +E+ NSFELL + D+ + K+E +K+VF LGWY+TG SD
Sbjct: 73 QEGRNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSD 132
Query: 119 MHIHKALMDINESPVYVLLNPSINPAQKDLPVTIFESELHVIEGIPQLIFVRSSYTIETV 178
+H+HK + +I ESP+++ LNP DLPV++FES + +I G ++F +YT+ T
Sbjct: 133 IHVHKQVCEIIESPLFLKLNPMTK--HTDLPVSVFESVIDIINGEATMLFAELTYTLATE 190
Query: 179 EAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIPC 238
EAERI VDHVA + + G +T +A HL HSAIKML+SR++++ Y+ A + GE+P
Sbjct: 191 EAERIGVDHVARMTATGSGENST-VAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPF 249
Query: 239 ENXXXXXXXXXXXXXPAIESEKFQDDF 265
+ P + ++KF+ DF
Sbjct: 250 NHEILREAYALCHCLPVLSTDKFKTDF 276
>UNIPROTKB|A7TX81 [details] [associations]
symbol:COPS6 "COP9 signalosome complex subunit 6"
species:9823 "Sus scrofa" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0005737 GO:GO:0008180 KO:K12179
InterPro:IPR024969 Pfam:PF13012 CTD:10980 HOVERGEN:HBG107770
EMBL:EF468513 RefSeq:NP_001098769.1 UniGene:Ssc.8359
ProteinModelPortal:A7TX81 GeneID:100125954 KEGG:ssc:100125954
Uniprot:A7TX81
Length = 323
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 103/267 (38%), Positives = 153/267 (57%)
Query: 1 MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGI 60
MAS + ++ LHPLVI+NISDH+ R++SQ G +V G +IG
Sbjct: 27 MASGVTGSVSVALHPLVILNISDHWIRMRSQ---------------EGRPMQVIGALIGK 71
Query: 61 QRGRTVEIFNSFELLYDPSTHSL--DRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESD 118
Q GR +E+ NSFELL + D+ + K+E +K+VF LGWY+TG SD
Sbjct: 72 QEGRNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSD 131
Query: 119 MHIHKALMDINESPVYVLLNPSINPAQKDLPVTIFESELHVIEGIPQLIFVRSSYTIETV 178
+H+HK + +I ESP+++ LNP DLPV++FES + +I G ++F +YT+ T
Sbjct: 132 IHVHKQVCEIIESPLFLKLNPMTK--HTDLPVSVFESVIDIINGEATMLFAELTYTLATE 189
Query: 179 EAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIPC 238
EAERI VDHVA + + G +T +A HL HSAIKML+SR++++ Y+ A + GE+P
Sbjct: 190 EAERIGVDHVARMTATGSGENST-VAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPF 248
Query: 239 ENXXXXXXXXXXXXXPAIESEKFQDDF 265
+ P + ++KF+ DF
Sbjct: 249 NHEILREAYALCHCLPVLSTDKFKTDF 275
>MGI|MGI:1349439 [details] [associations]
symbol:Cops6 "COP9 (constitutive photomorphogenic) homolog,
subunit 6 (Arabidopsis thaliana)" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180
"signalosome" evidence=ISO;IDA] [GO:0010388 "cullin deneddylation"
evidence=ISO] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
MGI:MGI:1349439 GO:GO:0005737 GO:GO:0008180 eggNOG:COG1310
GO:GO:0010388 HOGENOM:HOG000253002 KO:K12179 OMA:IGKQKGR
InterPro:IPR024969 Pfam:PF13012 CTD:10980 HOVERGEN:HBG107770
OrthoDB:EOG4JDH76 MEROPS:M67.972 EMBL:AF071315 EMBL:BC004664
EMBL:BC014286 IPI:IPI00131873 RefSeq:NP_036132.1 UniGene:Mm.3981
ProteinModelPortal:O88545 SMR:O88545 STRING:O88545
PhosphoSite:O88545 PaxDb:O88545 PRIDE:O88545
Ensembl:ENSMUST00000019638 GeneID:26893 KEGG:mmu:26893
InParanoid:O88545 NextBio:304723 Bgee:O88545 Genevestigator:O88545
GermOnline:ENSMUSG00000019494 Uniprot:O88545
Length = 324
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 103/267 (38%), Positives = 153/267 (57%)
Query: 1 MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGI 60
MAS + ++ LHPLVI+NISDH+ R++SQ G +V G +IG
Sbjct: 28 MASGVTGSVSVALHPLVILNISDHWIRMRSQ---------------EGRPMQVIGALIGK 72
Query: 61 QRGRTVEIFNSFELLYDPSTHSL--DRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESD 118
Q GR +E+ NSFELL + D+ + K+E +K+VF LGWY+TG SD
Sbjct: 73 QEGRNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSD 132
Query: 119 MHIHKALMDINESPVYVLLNPSINPAQKDLPVTIFESELHVIEGIPQLIFVRSSYTIETV 178
+H+HK + +I ESP+++ LNP DLPV++FES + +I G ++F +YT+ T
Sbjct: 133 IHVHKQVCEIIESPLFLKLNPMTK--HTDLPVSVFESVIDIINGEATMLFAELTYTLATE 190
Query: 179 EAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIPC 238
EAERI VDHVA + + G +T +A HL HSAIKML+SR++++ Y+ A + GE+P
Sbjct: 191 EAERIGVDHVARMTATGSGENST-VAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPF 249
Query: 239 ENXXXXXXXXXXXXXPAIESEKFQDDF 265
+ P + ++KF+ DF
Sbjct: 250 NHEILREAYALCHCLPVLSTDKFKTDF 276
>UNIPROTKB|A6QQ21 [details] [associations]
symbol:COPS6 "COP9 signalosome complex subunit 6"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0005737 GO:GO:0008180
eggNOG:COG1310 HOGENOM:HOG000253002 KO:K12179 InterPro:IPR024969
Pfam:PF13012 EMBL:BC149601 IPI:IPI00867272 RefSeq:NP_001095433.1
UniGene:Bt.52796 ProteinModelPortal:A6QQ21 STRING:A6QQ21
PRIDE:A6QQ21 GeneID:512756 KEGG:bta:512756 CTD:10980
HOVERGEN:HBG107770 InParanoid:A6QQ21 OrthoDB:EOG4JDH76
NextBio:20870547 Uniprot:A6QQ21
Length = 324
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 103/267 (38%), Positives = 153/267 (57%)
Query: 1 MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGI 60
MAS + ++ LHPLVI+NISDH+ R++SQ G +V G +IG
Sbjct: 28 MASGVTGSVSVALHPLVILNISDHWIRMRSQ---------------EGRPMQVIGALIGK 72
Query: 61 QRGRTVEIFNSFELLYDPSTHSL--DRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESD 118
Q GR +E+ NSFELL + D+ + K+E +K+VF LGWY+TG SD
Sbjct: 73 QEGRNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELDFLGWYTTGGPPDPSD 132
Query: 119 MHIHKALMDINESPVYVLLNPSINPAQKDLPVTIFESELHVIEGIPQLIFVRSSYTIETV 178
+H+HK + +I ESP+++ LNP DLPV++FES + +I G ++F +YT+ T
Sbjct: 133 IHVHKQVCEIIESPLFLKLNPMTK--HTDLPVSVFESVIDIINGEATMLFAELTYTLATE 190
Query: 179 EAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIPC 238
EAERI VDHVA + + G +T +A HL HSAIKML+SR++++ Y+ A + GE+P
Sbjct: 191 EAERIGVDHVARMTATGSGENST-VAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPF 249
Query: 239 ENXXXXXXXXXXXXXPAIESEKFQDDF 265
+ P + ++KF+ DF
Sbjct: 250 NHEILREAYALCHCLPVLSTDKFKTDF 276
>RGD|1309919 [details] [associations]
symbol:Cops6 "COP9 signalosome subunit 6" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0008180
"signalosome" evidence=IEA;ISO] [GO:0010388 "cullin deneddylation"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 RGD:1309919
GO:GO:0008180 GO:GO:0010388 KO:K12179 InterPro:IPR024969
Pfam:PF13012 CTD:10980 OrthoDB:EOG4JDH76
GeneTree:ENSGT00530000063075 EMBL:CH474107 IPI:IPI00870712
RefSeq:NP_001100599.1 UniGene:Rn.35643 Ensembl:ENSRNOT00000001820
GeneID:304343 KEGG:rno:304343 UCSC:RGD:1309919 NextBio:652918
Uniprot:D3ZI16
Length = 344
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 103/267 (38%), Positives = 153/267 (57%)
Query: 1 MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGI 60
MAS + ++ LHPLVI+NISDH+ R++SQ G +V G +IG
Sbjct: 48 MASGVTGSVSVALHPLVILNISDHWIRMRSQ---------------EGRPMQVIGALIGK 92
Query: 61 QRGRTVEIFNSFELLYDPSTHSL--DRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESD 118
Q GR +E+ NSFELL + D+ + K+E +K+VF LGWY+TG SD
Sbjct: 93 QEGRNIEVMNSFELLSHTVEKKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSD 152
Query: 119 MHIHKALMDINESPVYVLLNPSINPAQKDLPVTIFESELHVIEGIPQLIFVRSSYTIETV 178
+H+HK + +I ESP+++ LNP DLPV++FES + +I G ++F +YT+ T
Sbjct: 153 IHVHKQVCEIIESPLFLKLNPMTK--HTDLPVSVFESVIDIINGEATMLFAELTYTLATE 210
Query: 179 EAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIPC 238
EAERI VDHVA + + G +T +A HL HSAIKML+SR++++ Y+ A + GE+P
Sbjct: 211 EAERIGVDHVARMTATGSGENST-VAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPF 269
Query: 239 ENXXXXXXXXXXXXXPAIESEKFQDDF 265
+ P + ++KF+ DF
Sbjct: 270 NHEILREAYALCHCLPVLSTDKFKTDF 296
>UNIPROTKB|E7EM64 [details] [associations]
symbol:COPS6 "COP9 signalosome complex subunit 6"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0005634 InterPro:IPR024969
Pfam:PF13012 HGNC:HGNC:21749 ChiTaRS:COPS6 EMBL:AC073842
IPI:IPI00924791 ProteinModelPortal:E7EM64 SMR:E7EM64
Ensembl:ENST00000418625 ArrayExpress:E7EM64 Bgee:E7EM64
Uniprot:E7EM64
Length = 326
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 102/267 (38%), Positives = 152/267 (56%)
Query: 1 MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGI 60
MA + ++ LHPLVI+NISDH+ R++SQ G +V G +IG
Sbjct: 30 MACGVTGSVSVALHPLVILNISDHWIRMRSQ---------------EGRPVQVIGALIGK 74
Query: 61 QRGRTVEIFNSFELLYDPSTHSL--DRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESD 118
Q GR +E+ NSFELL + D+ + K+E +K+VF LGWY+TG SD
Sbjct: 75 QEGRNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSD 134
Query: 119 MHIHKALMDINESPVYVLLNPSINPAQKDLPVTIFESELHVIEGIPQLIFVRSSYTIETV 178
+H+HK + +I ESP+++ LNP DLPV++FES + +I G ++F +YT+ T
Sbjct: 135 IHVHKQVCEIIESPLFLKLNPMTK--HTDLPVSVFESVIDIINGEATMLFAELTYTLATE 192
Query: 179 EAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIPC 238
EAERI VDHVA + + G +T +A HL HSAIKML+SR++++ Y+ A + GE+P
Sbjct: 193 EAERIGVDHVARMTATGSGENST-VAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPF 251
Query: 239 ENXXXXXXXXXXXXXPAIESEKFQDDF 265
+ P + ++KF+ DF
Sbjct: 252 NHEILREAYALCHCLPVLSTDKFKTDF 278
>UNIPROTKB|Q7L5N1 [details] [associations]
symbol:COPS6 "COP9 signalosome complex subunit 6"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0008180 "signalosome"
evidence=IDA] [GO:0010388 "cullin deneddylation" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005737 GO:GO:0019048 EMBL:CH236956 EMBL:CH471091
GO:GO:0008180 eggNOG:COG1310 GO:GO:0010388 HOGENOM:HOG000253002
KO:K12179 OMA:IGKQKGR InterPro:IPR024969 Pfam:PF13012 CTD:10980
HOVERGEN:HBG107770 OrthoDB:EOG4JDH76 MEROPS:M67.972 EMBL:BC002520
EMBL:U70735 IPI:IPI00163230 RefSeq:NP_006824.2 UniGene:Hs.15591
ProteinModelPortal:Q7L5N1 SMR:Q7L5N1 DIP:DIP-32655N IntAct:Q7L5N1
MINT:MINT-5005311 STRING:Q7L5N1 PhosphoSite:Q7L5N1 DMDM:55976470
PaxDb:Q7L5N1 PeptideAtlas:Q7L5N1 PRIDE:Q7L5N1 DNASU:10980
Ensembl:ENST00000303904 GeneID:10980 KEGG:hsa:10980 UCSC:uc003usu.3
GeneCards:GC07P099686 HGNC:HGNC:21749 HPA:HPA044315 MIM:614729
neXtProt:NX_Q7L5N1 PharmGKB:PA134919933 InParanoid:Q7L5N1
PhylomeDB:Q7L5N1 ChiTaRS:COPS6 GenomeRNAi:10980 NextBio:41718
ArrayExpress:Q7L5N1 Bgee:Q7L5N1 CleanEx:HS_COPS6
Genevestigator:Q7L5N1 GermOnline:ENSG00000168090 Uniprot:Q7L5N1
Length = 327
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 102/267 (38%), Positives = 152/267 (56%)
Query: 1 MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGI 60
MA + ++ LHPLVI+NISDH+ R++SQ G +V G +IG
Sbjct: 31 MACGVTGSVSVALHPLVILNISDHWIRMRSQ---------------EGRPVQVIGALIGK 75
Query: 61 QRGRTVEIFNSFELLYDPSTHSL--DRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESD 118
Q GR +E+ NSFELL + D+ + K+E +K+VF LGWY+TG SD
Sbjct: 76 QEGRNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSD 135
Query: 119 MHIHKALMDINESPVYVLLNPSINPAQKDLPVTIFESELHVIEGIPQLIFVRSSYTIETV 178
+H+HK + +I ESP+++ LNP DLPV++FES + +I G ++F +YT+ T
Sbjct: 136 IHVHKQVCEIIESPLFLKLNPMTK--HTDLPVSVFESVIDIINGEATMLFAELTYTLATE 193
Query: 179 EAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIPC 238
EAERI VDHVA + + G +T +A HL HSAIKML+SR++++ Y+ A + GE+P
Sbjct: 194 EAERIGVDHVARMTATGSGENST-VAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPF 252
Query: 239 ENXXXXXXXXXXXXXPAIESEKFQDDF 265
+ P + ++KF+ DF
Sbjct: 253 NHEILREAYALCHCLPVLSTDKFKTDF 279
>FB|FBgn0028837 [details] [associations]
symbol:CSN6 "COP9 complex homolog subunit 6" species:7227
"Drosophila melanogaster" [GO:0008180 "signalosome" evidence=ISS]
[GO:0050821 "protein stabilization" evidence=IMP] [GO:0007095
"mitotic G2 DNA damage checkpoint" evidence=IGI] [GO:0046331
"lateral inhibition" evidence=IMP] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 EMBL:AE014297 GO:GO:0007275 GO:GO:0005737
GO:GO:0007095 GO:GO:0050821 GO:GO:0048477 GO:GO:0046331
GO:GO:0008180 eggNOG:COG1310 GO:GO:0000338 GO:GO:0019781 KO:K12179
OMA:IGKQKGR InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00530000063075 EMBL:AY070607 RefSeq:NP_524451.1
UniGene:Dm.2377 PDB:4E0Q PDBsum:4E0Q ProteinModelPortal:Q9VCY3
SMR:Q9VCY3 IntAct:Q9VCY3 MINT:MINT-991251 STRING:Q9VCY3
MEROPS:M67.972 PaxDb:Q9VCY3 PRIDE:Q9VCY3 EnsemblMetazoa:FBtr0084265
GeneID:42661 KEGG:dme:Dmel_CG6932 CTD:42661 FlyBase:FBgn0028837
InParanoid:Q9VCY3 OrthoDB:EOG4KSN1G PhylomeDB:Q9VCY3
GenomeRNAi:42661 NextBio:829940 Bgee:Q9VCY3 GermOnline:CG6932
Uniprot:Q9VCY3
Length = 341
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 97/269 (36%), Positives = 156/269 (57%)
Query: 1 MASSSSSG-LTFKLHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPR-VYGCVI 58
MA++ +SG +T LHPLVI+NIS+H+TR ++Q H +PR VYG +I
Sbjct: 43 MAAAGTSGSVTISLHPLVIMNISEHWTRFRAQ--HG--------------EPRQVYGALI 86
Query: 59 GIQRGRTVEIFNSFELLYDPSTHS--LDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQE 116
G Q+GR +EI NSFEL D +++ + KK++ YK+VF +GWY+TG +
Sbjct: 87 GKQKGRNIEIMNSFELKTDVIGDETVINKDYYNKKEQQYKQVFSDLDFIGWYTTGDNPTA 146
Query: 117 SDMHIHKALMDINESPVYVLLNPSINPAQKDLPVTIFESELHVIEGIPQLIFVRSSYTIE 176
D+ I + + INE P+ + LNP ++ + LP+ +FES + +++G ++FV +YT+
Sbjct: 147 DDIKIQRQIAAINECPIMLQLNP-LSRSVDHLPLKLFESLIDLVDGEATMLFVPLTYTLA 205
Query: 177 TVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEI 236
T EAERI VDHVA + ++ G + +A HL SAIKMLN+RI+++ Y+ ++ G++
Sbjct: 206 TEEAERIGVDHVARMTSNESGEKSV-VAEHLVAQDSAIKMLNTRIKIVLQYIRDVEAGKL 264
Query: 237 PCENXXXXXXXXXXXXXPAIESEKFQDDF 265
P ++ FQ++F
Sbjct: 265 RANQEILREAYALCHRLPVMQVPAFQEEF 293
>TAIR|locus:2166449 [details] [associations]
symbol:RPN8A "AT5G05780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005829 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000502
GO:GO:0009965 eggNOG:COG1310 EMBL:AB005237 InterPro:IPR024969
Pfam:PF13012 KO:K03038 EMBL:U54560 EMBL:AF378878 EMBL:BT002610
EMBL:AY087393 IPI:IPI00538047 RefSeq:NP_196197.1 UniGene:At.20537
UniGene:At.67787 ProteinModelPortal:O24412 SMR:O24412 IntAct:O24412
STRING:O24412 PaxDb:O24412 PRIDE:O24412 EnsemblPlants:AT5G05780.1
GeneID:830463 KEGG:ath:AT5G05780 TAIR:At5g05780
HOGENOM:HOG000209236 InParanoid:O24412 OMA:RSIIALH PhylomeDB:O24412
ProtClustDB:PLN03246 Genevestigator:O24412 GermOnline:AT5G05780
Uniprot:O24412
Length = 308
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 67/234 (28%), Positives = 116/234 (49%)
Query: 13 LHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQRGRTVEIFNSF 72
+HPLV+++I DHY RV SS RV G ++G V++ NS+
Sbjct: 19 VHPLVLLSIVDHYNRVAKD---SSK--------------RVVGVLLGSSSRGVVDVTNSY 61
Query: 73 ELLY-----DPSTHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKALMD 127
+ + DPS LD + E ++K++ +++GWYSTG +E+D+ +H
Sbjct: 62 AVPFEEDDKDPSIWFLDHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFNG 121
Query: 128 INESPVYVLLNPSINPAQKDLPVTIFESELHVIEGIPQL---IFVRSSYTIETVEAERIS 184
+PV V+++ + P + +P + + V E Q +FV S I E E I
Sbjct: 122 YVPNPVLVIID--VQPKELGIPTKAYYAVEEVKENATQKSQKVFVHVSTEIAAHEVEEIG 179
Query: 185 VDHVAH-LKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIP 237
V+H+ +K + + AT++ A LT A+K L++R+R + YL + +G++P
Sbjct: 180 VEHLLRDVKDTTISTLATEVTAKLT----ALKGLDARLREIRSYLDLVIEGKLP 229
>POMBASE|SPCC1682.10 [details] [associations]
symbol:rpn8 "19S proteasome regulatory subunit Rpn8
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004843
"ubiquitin-specific protease activity" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 PomBase:SPCC1682.10 GO:GO:0005829 GO:GO:0007346
GO:GO:0005635 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0008541 eggNOG:COG1310 GO:GO:0004843 InterPro:IPR024969
Pfam:PF13012 KO:K03038 HOGENOM:HOG000209236 MEROPS:M67.973
PIR:T41067 RefSeq:NP_587803.1 ProteinModelPortal:O74440 SMR:O74440
IntAct:O74440 STRING:O74440 PRIDE:O74440 EnsemblFungi:SPCC1682.10.1
GeneID:2538912 KEGG:spo:SPCC1682.10 OMA:KKINANE OrthoDB:EOG4QC4FM
NextBio:20800090 Uniprot:O74440
Length = 324
Score = 198 (74.8 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 57/208 (27%), Positives = 97/208 (46%)
Query: 37 SAXXXXXXXXXGAQPRVYGCVIGIQRGRTVEIFNSFELLYDP-----STHSLDRAFLEKK 91
SA G + RV G ++G G V + NS+ + ++ S LD F+E
Sbjct: 26 SAVDSYNRSAKGTKRRVVGILLGQNNGDVVNVANSYAIPFEEDEKNASVWFLDHNFMESM 85
Query: 92 QELYKKVFPHFYILGWYSTGSDAQESDMHIHKALMDINESPVYVLLNPSINPAQKDLPVT 151
E++KK+ + ++GWY TG + SD+ I+ L +PV V+++ + P LP
Sbjct: 86 NEMFKKINANEKLVGWYHTGPQLRPSDLEINNLLKKYIPNPVLVIID--VKPKSVGLPTN 143
Query: 152 IFES--ELHVIEGIPQLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTG 209
+ + E+ FV +IE EAE I V+H+ L+ + S T LA +T
Sbjct: 144 AYFAIDEIEDDGSKSSRTFVHLPSSIEAEEAEEIGVEHL--LRDTRDASVGT-LATRVTQ 200
Query: 210 IHSAIKMLNSRIRVLHHYLVAMQKGEIP 237
+++ L R+ + YL + G++P
Sbjct: 201 QAQSLQGLGQRLTEIADYLRKVVDGQLP 228
Score = 42 (19.8 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 13 LHPLVIVNISDHYTR 27
+HPLV+++ D Y R
Sbjct: 19 VHPLVLLSAVDSYNR 33
>TAIR|locus:2074653 [details] [associations]
symbol:MEE34 "AT3G11270" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0030163 "protein catabolic
process" evidence=TAS] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0010162
"seed dormancy process" evidence=RCA] [GO:0010564 "regulation of
cell cycle process" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0048366 "leaf
development" evidence=RCA] [GO:0048825 "cotyledon development"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009793
GO:GO:0030163 GO:GO:0000502 EMBL:AC073395 InterPro:IPR024969
Pfam:PF13012 KO:K03038 HOGENOM:HOG000209236 ProtClustDB:PLN03246
MEROPS:M67.973 EMBL:AY258412 EMBL:AK228032 IPI:IPI00536063
RefSeq:NP_187736.1 UniGene:At.39785 ProteinModelPortal:Q9C774
SMR:Q9C774 IntAct:Q9C774 STRING:Q9C774 PRIDE:Q9C774 DNASU:820298
EnsemblPlants:AT3G11270.1 GeneID:820298 KEGG:ath:AT3G11270
TAIR:At3g11270 InParanoid:Q9C774 OMA:INAKEHI PhylomeDB:Q9C774
Genevestigator:Q9C774 Uniprot:Q9C774
Length = 310
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 65/234 (27%), Positives = 114/234 (48%)
Query: 13 LHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQRGRTVEIFNSF 72
+HPLV+++I DHY RV + RV G ++G TV++ NS+
Sbjct: 19 VHPLVLLSIVDHYNRVAKDTSK-----------------RVVGVLLGSSSRGTVDVTNSY 61
Query: 73 ELLY-----DPSTHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKALMD 127
+ + D S LD + E ++K++ +I+GWYSTG +E+D+ +H
Sbjct: 62 AVPFEEDDKDTSIWFLDHNYHESMFHMFKRINAKEHIVGWYSTGPKLRENDLDVHALFNG 121
Query: 128 INESPVYVLLNPSINPAQKDLPVTIFESELHVIEGIPQL---IFVRSSYTIETVEAERIS 184
+PV V+++ + P + +P + + V E Q +FV I E E I
Sbjct: 122 YVPNPVLVIID--VQPKELGIPTKAYYAVEEVKENATQKSQQVFVHVPTEIAAHEVEEIG 179
Query: 185 VDHVAH-LKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIP 237
V+H+ +K + + AT++ A LT A+K L++R+R + YL + +G++P
Sbjct: 180 VEHLLRDVKDTTISTLATEVTAKLT----ALKGLDARLREIRTYLDLVIEGKLP 229
>ZFIN|ZDB-GENE-030131-5541 [details] [associations]
symbol:psmd7 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 7 (Mov34 homolog)" species:7955 "Danio rerio"
[GO:0021551 "central nervous system morphogenesis" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 ZFIN:ZDB-GENE-030131-5541 GO:GO:0000502
eggNOG:COG1310 GO:GO:0021551 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00530000063075 KO:K03038 HOGENOM:HOG000209236
OMA:RSIIALH MEROPS:M67.973 CTD:5713 HOVERGEN:HBG035951
OrthoDB:EOG441QC3 EMBL:BC044358 EMBL:BC066605 IPI:IPI00481317
RefSeq:NP_956083.1 UniGene:Dr.80368 SMR:Q7ZYX7 STRING:Q7ZYX7
Ensembl:ENSDART00000098229 GeneID:327330 KEGG:dre:327330
InParanoid:Q7ZYX7 NextBio:20809984 Uniprot:Q7ZYX7
Length = 327
Score = 200 (75.5 bits), Expect = 7.8e-16, P = 7.8e-16
Identities = 64/264 (24%), Positives = 122/264 (46%)
Query: 13 LHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQRGRTVEIFNSF 72
+HPLV++++ DH+ R+ G+Q RV G ++G + + +++ NSF
Sbjct: 11 VHPLVLLSVVDHFNRIGK----------------VGSQKRVVGVLLGSWQKKVLDVSNSF 54
Query: 73 ELLYDP-----STHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKALMD 127
+ +D S LD +LE ++KKV I+GWY TG ++D+ I++ +
Sbjct: 55 AVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKQ 114
Query: 128 INESPVYVLLNPSINPAQKDLPVTIFES--ELHVIEGIP-QLIFVRSSYTIETVEAERIS 184
+ V V+++ + P LP + S E+H +G P F + I EAE +
Sbjct: 115 YCSNSVLVIID--VKPKDLGLPTEAYISVEEVHD-DGTPTSKTFEHVTSEIGAEEAEEVG 171
Query: 185 VDHVAH-LKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIPCENXXX 243
V+H+ +K + G+ + ++ + G+ K LNS++ + YL + G++P +
Sbjct: 172 VEHLLRDIKDTTVGTLSQRITNQVHGL----KGLNSKLLDIKSYLEKVATGKLPINHQII 227
Query: 244 XXXXXXXXXXPAIESEKFQDDFLM 267
P + ++F F +
Sbjct: 228 YQLQDVFNLLPDVNLQEFVKAFYL 251
>ASPGD|ASPL0000029143 [details] [associations]
symbol:AN5121 species:162425 "Emericella nidulans"
[GO:0005622 "intracellular" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008541 "proteasome regulatory particle, lid
subcomplex" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0034515 "proteasome storage granule"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
EMBL:BN001305 InterPro:IPR024969 Pfam:PF13012 HOGENOM:HOG000209236
OMA:RSIIALH EnsemblFungi:CADANIAT00003105 Uniprot:C8VEY3
Length = 349
Score = 200 (75.5 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 62/236 (26%), Positives = 114/236 (48%)
Query: 10 TFKLHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQRGRTVEIF 69
T + PLV+++++DHY R SA G + RV G ++G G V +
Sbjct: 15 TVTVAPLVLLSVADHYGR---------SAK--------GTRKRVVGVLLGEHIGGNVRVS 57
Query: 70 NSFELLY-----DPSTHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKA 124
NSF + + DPS LD F+E ++++KK+ ++GWY +G + SD+ I++
Sbjct: 58 NSFAVPFEEDEKDPSVWFLDHNFVESMRDMFKKINAREKLIGWYHSGPKLRASDLEINEL 117
Query: 125 LMDINESPVYVLLNPSINPAQKDLPVTIFES--ELHVIEGIPQLIFVRSSYTIETVEAER 182
+P+ V+++ + P + +P + + E+ FV + TIE EAE
Sbjct: 118 FKRYTPNPLLVIVD--VQPKEVGVPTDAYFAVDEIKDDGTTTSRTFVHTPSTIEAEEAEE 175
Query: 183 ISVDHVAH-LKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIP 237
I V+H+ ++ G+ +T++ + L + L+ R+R + YL + E+P
Sbjct: 176 IGVEHLLRDIRDVAVGTLSTRITSQLQSLQG----LHLRLRDIGQYLQKVLDHELP 227
>UNIPROTKB|P51665 [details] [associations]
symbol:PSMD7 "26S proteasome non-ATPase regulatory subunit
7" species:9606 "Homo sapiens" [GO:0005515 "protein binding"
evidence=IPI] [GO:0000502 "proteasome complex" evidence=TAS]
[GO:0005838 "proteasome regulatory particle" evidence=TAS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005829 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0044281
GO:GO:0000082 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
eggNOG:COG1310 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH471166 GO:GO:0006521 Reactome:REACT_383 InterPro:IPR024969
Pfam:PF13012 KO:K03038 GO:GO:0005838 HOGENOM:HOG000209236
OMA:RSIIALH MEROPS:M67.973 CTD:5713 HOVERGEN:HBG035951
OrthoDB:EOG441QC3 EMBL:D50063 EMBL:BC000338 EMBL:BC012606
IPI:IPI00019927 PIR:JC4154 PIR:S65491 RefSeq:NP_002802.2
UniGene:Hs.440604 PDB:2O95 PDB:2O96 PDBsum:2O95 PDBsum:2O96
ProteinModelPortal:P51665 SMR:P51665 DIP:DIP-27572N IntAct:P51665
MINT:MINT-5002613 STRING:P51665 PhosphoSite:P51665 DMDM:20532412
PaxDb:P51665 PeptideAtlas:P51665 PRIDE:P51665 DNASU:5713
Ensembl:ENST00000219313 GeneID:5713 KEGG:hsa:5713 UCSC:uc002fcq.3
GeneCards:GC16P074330 HGNC:HGNC:9565 HPA:CAB019379 MIM:157970
neXtProt:NX_P51665 PharmGKB:PA33911 InParanoid:P51665
PhylomeDB:P51665 ChiTaRS:PSMD7 EvolutionaryTrace:P51665
GenomeRNAi:5713 NextBio:22194 ArrayExpress:P51665 Bgee:P51665
CleanEx:HS_PSMD7 Genevestigator:P51665 GermOnline:ENSG00000103035
Uniprot:P51665
Length = 324
Score = 195 (73.7 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 64/264 (24%), Positives = 121/264 (45%)
Query: 13 LHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQRGRTVEIFNSF 72
+HPLV++++ DH+ R+ G Q RV G ++G + + +++ NSF
Sbjct: 11 VHPLVLLSVVDHFNRIGK----------------VGNQKRVVGVLLGSWQKKVLDVSNSF 54
Query: 73 ELLYDP-----STHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKALMD 127
+ +D S LD +LE ++KKV I+GWY TG ++D+ I++ +
Sbjct: 55 AVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKR 114
Query: 128 INESPVYVLLNPSINPAQKDLPVTIFES--ELHVIEGIP-QLIFVRSSYTIETVEAERIS 184
+ V V+++ + P LP + S E+H +G P F + I EAE +
Sbjct: 115 YCPNSVLVIID--VKPKDLGLPTEAYISVEEVHD-DGTPTSKTFEHVTSEIGAEEAEEVG 171
Query: 185 VDHVAH-LKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIPCENXXX 243
V+H+ +K + G+ + ++ + G+ K LNS++ + YL + G++P +
Sbjct: 172 VEHLLRDIKDTTVGTLSQRITNQVHGL----KGLNSKLLDIRSYLEKVATGKLPINHQII 227
Query: 244 XXXXXXXXXXPAIESEKFQDDFLM 267
P + ++F F +
Sbjct: 228 YQLQDVFNLLPDVSLQEFVKAFYL 251
>UNIPROTKB|Q3ZBD0 [details] [associations]
symbol:PSMD7 "26S proteasome non-ATPase regulatory subunit
7" species:9913 "Bos taurus" [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0000502 eggNOG:COG1310 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00530000063075 KO:K03038 HOGENOM:HOG000209236
OMA:RSIIALH EMBL:BC103437 IPI:IPI00685826 RefSeq:NP_001029595.1
UniGene:Bt.49378 ProteinModelPortal:Q3ZBD0 SMR:Q3ZBD0 STRING:Q3ZBD0
MEROPS:M67.973 PRIDE:Q3ZBD0 Ensembl:ENSBTAT00000024515
GeneID:512456 KEGG:bta:512456 CTD:5713 HOVERGEN:HBG035951
InParanoid:Q3ZBD0 OrthoDB:EOG441QC3 NextBio:20870397 Uniprot:Q3ZBD0
Length = 322
Score = 194 (73.4 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 64/264 (24%), Positives = 121/264 (45%)
Query: 13 LHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQRGRTVEIFNSF 72
+HPLV++++ DH+ R+ G Q RV G ++G + + +++ NSF
Sbjct: 11 VHPLVLLSVVDHFNRIGK----------------VGNQKRVVGVLLGSWQKKVLDVSNSF 54
Query: 73 ELLYDP-----STHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKALMD 127
+ +D S LD +LE ++KKV I+GWY TG ++D+ I++ +
Sbjct: 55 AVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKR 114
Query: 128 INESPVYVLLNPSINPAQKDLPVTIFES--ELHVIEGIP-QLIFVRSSYTIETVEAERIS 184
+ V V+++ + P LP + S E+H +G P F + I EAE +
Sbjct: 115 YCPNSVLVIID--VKPKDLGLPTEAYISVEEVHD-DGTPTSKTFEHVTSEIGAEEAEEVG 171
Query: 185 VDHVAH-LKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIPCENXXX 243
V+H+ +K + G+ + ++ + G+ K LNS++ + YL + G++P +
Sbjct: 172 VEHLLRDIKDTTVGTLSQRITNQVHGL----KGLNSKLLDIRGYLEKVATGKLPINHQII 227
Query: 244 XXXXXXXXXXPAIESEKFQDDFLM 267
P + ++F F +
Sbjct: 228 YQLQDVFNLLPDVSLQEFVKAFYL 251
>MGI|MGI:1351511 [details] [associations]
symbol:Psmd7 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 7" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 MGI:MGI:1351511 GO:GO:0000502 eggNOG:COG1310
InterPro:IPR024969 Pfam:PF13012 GeneTree:ENSGT00530000063075
KO:K03038 HOGENOM:HOG000209236 OMA:RSIIALH MEROPS:M67.973 CTD:5713
HOVERGEN:HBG035951 OrthoDB:EOG441QC3 EMBL:M64641 EMBL:M64640
EMBL:M64634 EMBL:M64635 EMBL:M64636 EMBL:M64637 EMBL:M64639
EMBL:AK031013 EMBL:AK159825 IPI:IPI00114667 PIR:A40556
RefSeq:NP_034947.1 UniGene:Mm.18347 ProteinModelPortal:P26516
SMR:P26516 IntAct:P26516 STRING:P26516 PhosphoSite:P26516
PaxDb:P26516 PRIDE:P26516 Ensembl:ENSMUST00000044106 GeneID:17463
KEGG:mmu:17463 InParanoid:P26516 NextBio:292104 Bgee:P26516
Genevestigator:P26516 GermOnline:ENSMUSG00000039067 Uniprot:P26516
Length = 321
Score = 192 (72.6 bits), Expect = 6.0e-15, P = 6.0e-15
Identities = 61/234 (26%), Positives = 113/234 (48%)
Query: 13 LHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQRGRTVEIFNSF 72
+HPLV++++ DH+ R+ G Q RV G ++G + + +++ NSF
Sbjct: 11 VHPLVLLSVVDHFNRIGK----------------VGNQKRVVGVLLGSWQKKVLDVSNSF 54
Query: 73 ELLYDP-----STHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKALMD 127
+ +D S LD +LE ++KKV I+GWY TG ++D+ I++ +
Sbjct: 55 AVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKR 114
Query: 128 INESPVYVLLNPSINPAQKDLPVTIFES--ELHVIEGIP-QLIFVRSSYTIETVEAERIS 184
+ V V+++ + P LP + S E+H +G P F + I EAE +
Sbjct: 115 YCPNSVLVIID--VKPKDLGLPTEAYISVEEVHD-DGTPTSKTFEHVTSEIGAEEAEEVG 171
Query: 185 VDHVAH-LKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIP 237
V+H+ +K + G+ + ++ + G+ K LNS++ + YL + G++P
Sbjct: 172 VEHLLRDIKDTTVGTLSQRITNQVHGL----KGLNSKLLDIRSYLEKVASGKLP 221
>UNIPROTKB|G4NCJ9 [details] [associations]
symbol:MGG_01059 "26S proteasome regulatory subunit rpn-8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
EMBL:CM001235 GO:GO:0000502 InterPro:IPR024969 Pfam:PF13012
KO:K03038 RefSeq:XP_003717880.1 ProteinModelPortal:G4NCJ9
SMR:G4NCJ9 EnsemblFungi:MGG_01059T0 GeneID:2674847
KEGG:mgr:MGG_01059 Uniprot:G4NCJ9
Length = 357
Score = 193 (73.0 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 58/230 (25%), Positives = 109/230 (47%)
Query: 15 PLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQRGRTVEIFNSFEL 74
PLV++++ DHY R + + RV G ++G G+ V + NSF +
Sbjct: 20 PLVLLSVVDHYNRESANQTKNK---------------RVVGVLLGQNDGKNVRVSNSFAV 64
Query: 75 LYD-----PSTHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKALMDIN 129
++ PS LD ++E +++KKV ++GWY +G + SD+ I++
Sbjct: 65 PFEEDEKNPSVWFLDHNYVESMNDMFKKVNAREKLIGWYHSGPKLRASDLEINELFKRYT 124
Query: 130 ESPVYVLLNPSINPAQKDLPVTIFES--ELHVIEGIPQLIFVRSSYTIETVEAERISVDH 187
+P+ V+++ + P + +P + + E+ FV + IE EAE I V+H
Sbjct: 125 PNPLLVIID--VQPKEAGVPTDAYFAVDEIKDDGTATSRTFVHTPSIIEAEEAEEIGVEH 182
Query: 188 VAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIP 237
+ L+ + T L+ LT +++ L+ R+R + YL + G++P
Sbjct: 183 L--LRDIRDVAVGT-LSTRLTNQLQSLQGLHLRLRDIQAYLQKVLDGDLP 229
>RGD|1306902 [details] [associations]
symbol:Psmd7 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 7" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 RGD:1306902 GO:GO:0000502 EMBL:CH473972
InterPro:IPR024969 Pfam:PF13012 GeneTree:ENSGT00530000063075
KO:K03038 OMA:RSIIALH CTD:5713 OrthoDB:EOG441QC3 IPI:IPI00359611
RefSeq:NP_001100896.1 UniGene:Rn.20659 IntAct:D4AEH3
Ensembl:ENSRNOT00000019104 GeneID:307821 KEGG:rno:307821
UCSC:RGD:1306902 NextBio:657930 Uniprot:D4AEH3
Length = 320
Score = 191 (72.3 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 61/234 (26%), Positives = 113/234 (48%)
Query: 13 LHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQRGRTVEIFNSF 72
+HPLV++++ DH+ R+ G Q RV G ++G + + +++ NSF
Sbjct: 11 VHPLVLLSVVDHFNRIGK----------------VGNQKRVVGVLLGSWQKKVLDVSNSF 54
Query: 73 ELLYDP-----STHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKALMD 127
+ +D S LD +LE ++KKV I+GWY TG ++D+ I++ +
Sbjct: 55 AVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKR 114
Query: 128 INESPVYVLLNPSINPAQKDLPVTIFES--ELHVIEGIP-QLIFVRSSYTIETVEAERIS 184
+ V V+++ + P LP + S E+H +G P F + I EAE +
Sbjct: 115 YCPNSVLVIID--VKPKDLGLPTEAYISVEEVHD-DGTPTSKTFEHVTSEIGAEEAEEVG 171
Query: 185 VDHVAH-LKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIP 237
V+H+ +K + G+ + ++ + G+ K LNS++ + YL + G++P
Sbjct: 172 VEHLLRDIKDTTVGTLSQRITNQVHGL----KGLNSKLLDIRTYLEKVASGKLP 221
>DICTYBASE|DDB_G0293254 [details] [associations]
symbol:eif3F "eukaryotic translation initiation
factor 3 (eIF3) subunit 5" species:44689 "Dictyostelium discoideum"
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=ISS] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
dictyBase:DDB_G0293254 GenomeReviews:CM000155_GR EMBL:AAFI02000200
GO:GO:0003743 eggNOG:COG1310 GO:GO:0005852 InterPro:IPR024969
Pfam:PF13012 KO:K03249 OMA:HPVVLFQ HAMAP:MF_03005
RefSeq:XP_629217.1 ProteinModelPortal:Q54C49 STRING:Q54C49
PRIDE:Q54C49 EnsemblProtists:DDB0233924 GeneID:8629099
KEGG:ddi:DDB_G0293254 ProtClustDB:CLSZ2429292 Uniprot:Q54C49
Length = 284
Score = 161 (61.7 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 44/190 (23%), Positives = 89/190 (46%)
Query: 50 QPRVYGCVIGIQRGRTVEIFNSFELLYDPSTH-SLDRAFLEKKQELYKKVFPHFYILGWY 108
Q RV G ++G +EI N F +++ + +++ + K +L+ K P I+GWY
Sbjct: 36 QDRVIGTLLGFNNDGVLEIRNCFPVVHSETEQIAVEMEYQRKMLDLHLKSSPREPIIGWY 95
Query: 109 STGSDAQESDMHIHKALMDI--NESPVYVLLNPSINPAQKDLPVTIFESELHVIEGIPQL 166
+TG+D E+ +HI+ D N +P+++ ++ + + + + E
Sbjct: 96 ATGNDINENSVHINNFYRDEMGNSTPIHLTVDTGLTNDTMGIHAYMAHNLSLNPESSLGS 155
Query: 167 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHH 226
F + I T EAE ++ +A K +T L + L + ++ L+ + +
Sbjct: 156 YFSQLPLEILTFEAENAGLESIAQTKYDQ---QSTSLLSELESLQGSLTKLDEMLESITS 212
Query: 227 YLVAMQKGEI 236
Y+ +++KGEI
Sbjct: 213 YIESVEKGEI 222
Score = 69 (29.3 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 7 SGLTFKLHPLVIVNISDHYTR 27
S +T K+HP+VI NI DHY R
Sbjct: 11 SQVTVKVHPVVIFNILDHYIR 31
>DICTYBASE|DDB_G0279633 [details] [associations]
symbol:psmD7 "26S proteasome non-ATPase regulatory
subunit 7" species:44689 "Dictyostelium discoideum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 dictyBase:DDB_G0279633 GenomeReviews:CM000152_GR
GO:GO:0006511 EMBL:AAFI02000032 eggNOG:COG1310 InterPro:IPR024969
Pfam:PF13012 KO:K03038 GO:GO:0005838 OMA:RSIIALH MEROPS:M67.973
RefSeq:XP_641565.1 ProteinModelPortal:Q54WI8 SMR:Q54WI8
STRING:Q54WI8 EnsemblProtists:DDB0232987 GeneID:8622140
KEGG:ddi:DDB_G0279633 ProtClustDB:CLSZ2434496 Uniprot:Q54WI8
Length = 325
Score = 189 (71.6 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 62/235 (26%), Positives = 108/235 (45%)
Query: 13 LHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQRGRTVEIFNSF 72
+HP V++++ DHY RV N RV G ++G V++ N +
Sbjct: 10 VHPTVLLSVVDHYNRVAKDTNK-----------------RVVGALLGSNNKGVVDVSNCY 52
Query: 73 ELLYD-----PSTHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKALMD 127
L ++ P+ LD F E ++KK+ ++GWYSTG + +D I++
Sbjct: 53 GLPFEEDEANPNIWFLDHNFHENMFAMFKKINARENVVGWYSTGPKIRPADQDINELFRR 112
Query: 128 INESPVYVLLNPSINPAQKDLP----VTIFESELHVIEGIPQLIFVRSSYTIETVEAERI 183
+PV V+++ + P + +P VT+ E E + + SS I+ VEAE I
Sbjct: 113 YTPNPVMVIID--VAPKELGIPTKSYVTVEEINKDTSESTMRFQHIPSS--IDAVEAEEI 168
Query: 184 SVDHVAH-LKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIP 237
++H+ +K S S TQ+ T ++K L + ++ + HYL + G +P
Sbjct: 169 CIEHLLRDVKDSSISSLTTQI----TDKKISLKHLLTNLQEMQHYLKLVCDGTLP 219
>WB|WBGene00004464 [details] [associations]
symbol:rpn-8 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0000003 eggNOG:COG1310 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00530000063075 EMBL:FO080613 KO:K03038
HOGENOM:HOG000209236 OMA:RSIIALH MEROPS:M67.973 PIR:T33096
RefSeq:NP_491319.1 ProteinModelPortal:O61792 SMR:O61792
IntAct:O61792 MINT:MINT-210994 STRING:O61792 PaxDb:O61792
EnsemblMetazoa:R12E2.3.1 EnsemblMetazoa:R12E2.3.2 GeneID:172009
KEGG:cel:CELE_R12E2.3 UCSC:R12E2.3.1 CTD:172009 WormBase:R12E2.3
InParanoid:O61792 NextBio:873645 Uniprot:O61792
Length = 362
Score = 188 (71.2 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 65/236 (27%), Positives = 115/236 (48%)
Query: 13 LHPLVIVNISDHYTRV-KSQMNHSSSAXXXXXXXXXGAQPRVYGCVIG-IQRGRTVEIFN 70
+HPLV++++ DH+ RV K+Q + RV G ++G +++ +T++I N
Sbjct: 43 VHPLVLLSVVDHFNRVSKTQ-----------------SVKRVVGVLLGSMKKDKTLDIGN 85
Query: 71 SFELLYDP-----STHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKAL 125
SF + +D ST LD +LE ++ KV I+GWY TG ++D+ I++ L
Sbjct: 86 SFAVPFDEDDKDKSTWFLDMDYLESMYGMFYKVAAKEKIVGWYHTGPKLHKNDIAINEQL 145
Query: 126 MDINESPVYVLLNPSINPAQKDLPVTIF-E-SELHVIEGIPQL-IFVRSSYTIETVEAER 182
+PV V+++ P LP + E E+H +G P + F I EAE
Sbjct: 146 KRFCPNPVLVIIDAE--PKNIGLPTEAYIEVQEVHD-DGTPPIKTFEHVPSDIGAEEAEE 202
Query: 183 ISVDHVAH-LKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIP 237
+ V+H+ +K G+ + ++ L G+ L S++ + YL + +G +P
Sbjct: 203 VGVEHLLRDIKDQTAGTLSQRITDQLMGLRG----LQSQLESIEKYLHDIVRGTLP 254
>UNIPROTKB|O61792 [details] [associations]
symbol:rpn-8 "Protein RPN-8" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0000003
eggNOG:COG1310 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00530000063075 EMBL:FO080613 KO:K03038
HOGENOM:HOG000209236 OMA:RSIIALH MEROPS:M67.973 PIR:T33096
RefSeq:NP_491319.1 ProteinModelPortal:O61792 SMR:O61792
IntAct:O61792 MINT:MINT-210994 STRING:O61792 PaxDb:O61792
EnsemblMetazoa:R12E2.3.1 EnsemblMetazoa:R12E2.3.2 GeneID:172009
KEGG:cel:CELE_R12E2.3 UCSC:R12E2.3.1 CTD:172009 WormBase:R12E2.3
InParanoid:O61792 NextBio:873645 Uniprot:O61792
Length = 362
Score = 188 (71.2 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 65/236 (27%), Positives = 115/236 (48%)
Query: 13 LHPLVIVNISDHYTRV-KSQMNHSSSAXXXXXXXXXGAQPRVYGCVIG-IQRGRTVEIFN 70
+HPLV++++ DH+ RV K+Q + RV G ++G +++ +T++I N
Sbjct: 43 VHPLVLLSVVDHFNRVSKTQ-----------------SVKRVVGVLLGSMKKDKTLDIGN 85
Query: 71 SFELLYDP-----STHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKAL 125
SF + +D ST LD +LE ++ KV I+GWY TG ++D+ I++ L
Sbjct: 86 SFAVPFDEDDKDKSTWFLDMDYLESMYGMFYKVAAKEKIVGWYHTGPKLHKNDIAINEQL 145
Query: 126 MDINESPVYVLLNPSINPAQKDLPVTIF-E-SELHVIEGIPQL-IFVRSSYTIETVEAER 182
+PV V+++ P LP + E E+H +G P + F I EAE
Sbjct: 146 KRFCPNPVLVIIDAE--PKNIGLPTEAYIEVQEVHD-DGTPPIKTFEHVPSDIGAEEAEE 202
Query: 183 ISVDHVAH-LKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIP 237
+ V+H+ +K G+ + ++ L G+ L S++ + YL + +G +P
Sbjct: 203 VGVEHLLRDIKDQTAGTLSQRITDQLMGLRG----LQSQLESIEKYLHDIVRGTLP 254
>FB|FBgn0002787 [details] [associations]
symbol:Rpn8 "Regulatory particle non-ATPase 8" species:7227
"Drosophila melanogaster" [GO:0004175 "endopeptidase activity"
evidence=NAS;IDA] [GO:0000502 "proteasome complex"
evidence=NAS;IDA] [GO:0008541 "proteasome regulatory particle, lid
subcomplex" evidence=ISS;NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0009987 "cellular process" evidence=IMP]
[GO:0030425 "dendrite" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0007052 "mitotic spindle
organization" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
EMBL:AE013599 GO:GO:0022008 GO:GO:0008283 GO:GO:0030425
GO:GO:0006508 GO:GO:0004175 GO:GO:0008541 eggNOG:COG1310
GO:GO:0000022 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00530000063075 KO:K03038 BRENDA:3.4.25.1 OMA:RSIIALH
MEROPS:M67.973 EMBL:M64643 EMBL:AY089283 RefSeq:NP_523845.2
UniGene:Dm.770 ProteinModelPortal:P26270 SMR:P26270 DIP:DIP-22847N
IntAct:P26270 MINT:MINT-819762 STRING:P26270 PaxDb:P26270
EnsemblMetazoa:FBtr0072290 EnsemblMetazoa:FBtr0332921 GeneID:37894
KEGG:dme:Dmel_CG3416 UCSC:CG3416-RA CTD:37894 FlyBase:FBgn0002787
InParanoid:P26270 OrthoDB:EOG4BG7BS PhylomeDB:P26270
GenomeRNAi:37894 NextBio:805917 Bgee:P26270 GermOnline:CG3416
Uniprot:P26270
Length = 338
Score = 187 (70.9 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 66/259 (25%), Positives = 118/259 (45%)
Query: 13 LHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQRGRTV-EIFNS 71
+HPLV++++ DH+ R+ G Q RV G ++G R + V ++ NS
Sbjct: 13 VHPLVLLSVVDHFNRMGK----------------IGNQKRVVGVLLGCWRSKGVLDVSNS 56
Query: 72 FELLYDP-----STHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKALM 126
F + +D S LD +LE ++KKV ++GWY TG ++D+ I++ +
Sbjct: 57 FAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELVR 116
Query: 127 DINESPVYVLLNPSINPAQKDLPVTIFES--ELHVIEGIP-QLIFVRSSYTIETVEAERI 183
+ V V+++ P LP + S E+H +G P F I EAE +
Sbjct: 117 RYCPNSVLVIIDAK--PKDLGLPTEAYISVEEVHD-DGSPTSKTFEHVPSEIGAEEAEEV 173
Query: 184 SVDHVAH-LKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIPCENXX 242
V+H+ +K + GS + ++ L G+ K LN+++R + YL + ++P +
Sbjct: 174 GVEHLLRDIKDTTVGSLSQKITNQLMGL----KGLNAQLRDIKQYLQRVGDSKMPINHQI 229
Query: 243 XXXXXXXXXXXPAIESEKF 261
P I +++F
Sbjct: 230 VYQLQDIFNLLPDITNDQF 248
>WB|WBGene00000818 [details] [associations]
symbol:csn-6 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0009792 GO:GO:0006915 GO:GO:0000003 GO:GO:0000910
InterPro:IPR024969 Pfam:PF13012 EMBL:AL132951 GeneID:178289
KEGG:cel:CELE_Y67H2A.6 CTD:178289 GeneTree:ENSGT00530000063075
HOGENOM:HOG000016396 RefSeq:NP_001255725.1
ProteinModelPortal:C5VUK2 IntAct:C5VUK2 STRING:C5VUK2
EnsemblMetazoa:Y67H2A.6b.1 EnsemblMetazoa:Y67H2A.6b.2
WormBase:Y67H2A.6b OMA:QDGTLQP ArrayExpress:C5VUK2 Uniprot:C5VUK2
Length = 431
Score = 186 (70.5 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 66/252 (26%), Positives = 112/252 (44%)
Query: 2 ASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQ 61
A S S LHPLVI+ +S+HY+R K Q + +V+G ++G Q
Sbjct: 5 APSGSCSSKVLLHPLVIMQMSEHYSRTKVQQGPTVK--------------KVFGAILGRQ 50
Query: 62 RGRTVEIFNSFEL------LYDPSTHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSD-- 113
GR VE NSF L + +P T S + L ++ + Y +VFP ++G Y G D
Sbjct: 51 NGRQVEAINSFVLKMETEEMAEPVTFSTEH--LLQRADQYLEVFPELQVIGLYCAGEDDN 108
Query: 114 -AQESDMHIHKALMDINESP--------VYVLLNPSINPAQKDLPVTIFESELHVIEGIP 164
E + K + S +++ LN + LP+ FE+++ E
Sbjct: 109 LTPEEKPLLSKLTNAVRNSEKAGQIDATLFLKLNSITAGTTRKLPLFAFEADVTDQEKHK 168
Query: 165 QLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVL 224
+ ++ + + E+ER+ V+H+A L G + H +A+ ML +R+ ++
Sbjct: 169 PIEWI-----LVSEESERVGVNHIAKLSTKHGKDGKSVGKKHAEAQDAAMSMLQNRVDLI 223
Query: 225 HHYLVAMQKGEI 236
YL +Q G +
Sbjct: 224 VAYLEKVQDGTL 235
>ASPGD|ASPL0000051695 [details] [associations]
symbol:csnF species:162425 "Emericella nidulans"
[GO:0008180 "signalosome" evidence=IDA] [GO:0070791 "cleistothecium
development" evidence=IPI] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005737 EMBL:BN001307 GO:GO:0008180 EMBL:AACD01000036
eggNOG:NOG264163 RefSeq:XP_659837.1 STRING:Q5BB47
EnsemblFungi:CADANIAT00008919 GeneID:2875096 KEGG:ani:AN2233.2
HOGENOM:HOG000172990 OMA:TGEAEMI OrthoDB:EOG4GTPPP Uniprot:Q5BB47
Length = 386
Score = 183 (69.5 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 68/235 (28%), Positives = 115/235 (48%)
Query: 4 SSSSGLTFKLHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQRG 63
SS SGL +LHPL ++ ISDH TR H++ + Q + G ++G G
Sbjct: 13 SSDSGLHIQLHPLALLTISDHITR------HAARSQ----------QGPIVGGLLGQHNG 56
Query: 64 RTVEIFNSFELLYD--PSTHS-LDRAFLEKKQELYKKVF--PHFYILGWYSTGSDAQESD 118
R + + + FE + + P+ + L + + + +K V P ++GW+ST + +
Sbjct: 57 REITVEHGFECVVEIGPNGEAQLPNEWFVDRVKQFKDVHKVPALDLIGWWSTAPPSGPTT 116
Query: 119 MH--IHKALM-DINESPVYVLLNPS----INPAQKDLPVTIFES-----------ELHVI 160
H IH+ ++ + NES V++ +PS + +Q LP+TI+ES + +
Sbjct: 117 AHLPIHRQILQNHNESAVFLTFHPSQVQGASQSQGKLPLTIYESVYEGESVTENGKAMQV 176
Query: 161 EGIPQLIFVRSS---YTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHS 212
+G QL+ +R YTIET EAE I +D VA + + + +AA + I S
Sbjct: 177 DGEEQLLNIRFRELPYTIETGEAEMIGIDTVARTARNAAATETSTVAAPSSQIDS 231
>UNIPROTKB|E1BLZ8 [details] [associations]
symbol:EIF3F "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005852 "eukaryotic translation initiation factor 3
complex" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0003743 GO:GO:0005852 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00530000063075 EMBL:DAAA02040761
IPI:IPI00837929 Ensembl:ENSBTAT00000049219 OMA:HHETMYE
Uniprot:E1BLZ8
Length = 384
Score = 173 (66.0 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 64/276 (23%), Positives = 121/276 (43%)
Query: 8 GLTFKLHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQRGRTVE 67
G +LHP+++ +I D Y R +++ GA RV G ++G +VE
Sbjct: 116 GRVVRLHPVILASIVDSYER-RNE----------------GAA-RVIGTLLGTVDKHSVE 157
Query: 68 IFNSFELLYDPSTH--SLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKAL 125
+ N F + ++ S ++D F + EL+KKV P+ ILGWY+TG D E + IH+
Sbjct: 158 VTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYY 217
Query: 126 MDINESPVYVLLNPSINPAQKDLPVTIFESELHVIEGIPQ-LIFVRSSYTIETVEAERIS 184
+P+++ ++ S+ + + + + S L + G ++F + + ERI
Sbjct: 218 SREAPNPIHLTVDTSLQNGR--MSIKAYVSTLMGVPGRTMGVMFTPLTVKYTYYDTERIG 275
Query: 185 VDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIPCENXXXX 244
VD + +K + L++ L + A + + + Y + G++ +N
Sbjct: 276 VDLI--MKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGR 333
Query: 245 XXXXXXXXXPAIESEKFQ-------DDFLMVSLFSS 273
P I E F+ +D LMV+ ++
Sbjct: 334 FLMSLVNQVPKIVPEDFETMLNSNINDLLMVTYLAN 369
>CGD|CAL0002371 [details] [associations]
symbol:RPN8 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0035690 "cellular response to
drug" evidence=IMP] [GO:0008541 "proteasome regulatory particle,
lid subcomplex" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0034515 "proteasome storage granule"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
CGD:CAL0002371 GO:GO:0035690 EMBL:AACQ01000100 eggNOG:COG1310
InterPro:IPR024969 Pfam:PF13012 KO:K03038 HOGENOM:HOG000209236
MEROPS:M67.973 RefSeq:XP_714586.1 ProteinModelPortal:Q59YL2
SMR:Q59YL2 STRING:Q59YL2 GeneID:3643770 KEGG:cal:CaO19.3168
Uniprot:Q59YL2
Length = 330
Score = 170 (64.9 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 50/230 (21%), Positives = 109/230 (47%)
Query: 15 PLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQRGRTVEIFNSFEL 74
PLV++++ DHY RV ++ RV G ++G T+++ NS+ +
Sbjct: 22 PLVLLSVVDHYNRVAKD-----------------SKKRVVGVILGDNSTDTIKVTNSYAI 64
Query: 75 LYD-----PSTHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKALMDIN 129
++ P LD F++ E++KK+ ++GWY +G + SD+ I++
Sbjct: 65 PFEEDEKNPGVWFLDHNFIDSMGEMFKKINAKEKLIGWYHSGPKLKPSDLKINEVFRRYT 124
Query: 130 ESPVYVLLNPSINPAQKDLPVTIFES--ELHVIEGIPQLIFVRSSYTIETVEAERISVDH 187
++P+ ++++ + P + +P + + ++ + F+ IE EAE I V+H
Sbjct: 125 DNPLLLIVD--VQPREVGIPTDAYFAVDDIKNDGSAAEKTFIHVPSLIEAEEAEEIGVEH 182
Query: 188 VAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIP 237
+ D AA L+ ++ H ++ L+ ++ + +YL + + ++P
Sbjct: 183 LLR-DIRD--QAAGNLSLRVSETHQSLLGLHQKLGEIANYLDKVYQKKLP 229
>UNIPROTKB|Q59YL2 [details] [associations]
symbol:RPN8 "Likely 26S proteasome regulatory particle
subunit Rpn8p" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0035690 "cellular response to
drug" evidence=IMP] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
CGD:CAL0002371 GO:GO:0035690 EMBL:AACQ01000100 eggNOG:COG1310
InterPro:IPR024969 Pfam:PF13012 KO:K03038 HOGENOM:HOG000209236
MEROPS:M67.973 RefSeq:XP_714586.1 ProteinModelPortal:Q59YL2
SMR:Q59YL2 STRING:Q59YL2 GeneID:3643770 KEGG:cal:CaO19.3168
Uniprot:Q59YL2
Length = 330
Score = 170 (64.9 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 50/230 (21%), Positives = 109/230 (47%)
Query: 15 PLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQRGRTVEIFNSFEL 74
PLV++++ DHY RV ++ RV G ++G T+++ NS+ +
Sbjct: 22 PLVLLSVVDHYNRVAKD-----------------SKKRVVGVILGDNSTDTIKVTNSYAI 64
Query: 75 LYD-----PSTHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKALMDIN 129
++ P LD F++ E++KK+ ++GWY +G + SD+ I++
Sbjct: 65 PFEEDEKNPGVWFLDHNFIDSMGEMFKKINAKEKLIGWYHSGPKLKPSDLKINEVFRRYT 124
Query: 130 ESPVYVLLNPSINPAQKDLPVTIFES--ELHVIEGIPQLIFVRSSYTIETVEAERISVDH 187
++P+ ++++ + P + +P + + ++ + F+ IE EAE I V+H
Sbjct: 125 DNPLLLIVD--VQPREVGIPTDAYFAVDDIKNDGSAAEKTFIHVPSLIEAEEAEEIGVEH 182
Query: 188 VAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIP 237
+ D AA L+ ++ H ++ L+ ++ + +YL + + ++P
Sbjct: 183 LLR-DIRD--QAAGNLSLRVSETHQSLLGLHQKLGEIANYLDKVYQKKLP 229
>UNIPROTKB|O00303 [details] [associations]
symbol:EIF3F "Eukaryotic translation initiation factor 3
subunit F" species:9606 "Homo sapiens" [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=IDA;TAS] [GO:0003743 "translation initiation factor
activity" evidence=IC;IDA;TAS] [GO:0006413 "translational
initiation" evidence=IC;IDA;TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006412 "translation" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_17015 InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005829 GO:GO:0008234 GO:GO:0006508 GO:GO:0003743
eggNOG:COG1310 GO:GO:0005852 InterPro:IPR024969 Pfam:PF13012
KO:K03249 HAMAP:MF_03005 Reactome:REACT_1762 HOGENOM:HOG000241154
EMBL:U94855 EMBL:AK095574 EMBL:AK289637 EMBL:AK291354 EMBL:BT006894
EMBL:CR456959 EMBL:BC000490 IPI:IPI00941255 RefSeq:NP_003745.1
UniGene:Hs.516023 ProteinModelPortal:O00303 SMR:O00303
DIP:DIP-35580N IntAct:O00303 MINT:MINT-5000761 STRING:O00303
MEROPS:M67.974 PhosphoSite:O00303 PaxDb:O00303 PRIDE:O00303
DNASU:8665 Ensembl:ENST00000309828 Ensembl:ENST00000533626
GeneID:8665 KEGG:hsa:8665 UCSC:uc001mfw.3 CTD:8665
GeneCards:GC11P007966 HGNC:HGNC:3275 HPA:HPA049250 MIM:603914
neXtProt:NX_O00303 PharmGKB:PA162384806 HOVERGEN:HBG107843
InParanoid:O00303 OrthoDB:EOG44XJHN PhylomeDB:O00303
GenomeRNAi:8665 NextBio:32503 ArrayExpress:O00303 Bgee:O00303
CleanEx:HS_EIF3F Genevestigator:O00303 GermOnline:ENSG00000175390
Uniprot:O00303
Length = 357
Score = 170 (64.9 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 63/276 (22%), Positives = 121/276 (43%)
Query: 8 GLTFKLHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQRGRTVE 67
G +LHP+++ +I D Y R +++ GA RV G ++G +VE
Sbjct: 89 GRVVRLHPVILASIVDSYER-RNE----------------GAA-RVIGTLLGTVDKHSVE 130
Query: 68 IFNSFELLYDPSTH--SLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKAL 125
+ N F + ++ S ++D F + EL+KKV P+ ILGWY+TG D E + IH+
Sbjct: 131 VTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYY 190
Query: 126 MDINESPVYVLLNPSINPAQKDLPVTIFESELHVIEGIPQ-LIFVRSSYTIETVEAERIS 184
+P+++ ++ S+ + + + + S L + G ++F + + ERI
Sbjct: 191 SREAPNPIHLTVDTSLQNGR--MSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIG 248
Query: 185 VDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIPCENXXXX 244
VD + +K + L++ L + A + + + Y + G++ +N
Sbjct: 249 VDLI--MKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGR 306
Query: 245 XXXXXXXXXPAIESEKFQ-------DDFLMVSLFSS 273
P I + F+ +D LMV+ ++
Sbjct: 307 FLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLAN 342
>UNIPROTKB|A5A6I3 [details] [associations]
symbol:EIF3F "Eukaryotic translation initiation factor 3
subunit F" species:9598 "Pan troglodytes" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0006413 GO:GO:0008234
GO:GO:0006508 GO:GO:0003743 eggNOG:COG1310 GO:GO:0005852
InterPro:IPR024969 Pfam:PF13012 KO:K03249 HAMAP:MF_03005
HOGENOM:HOG000241154 CTD:8665 HOVERGEN:HBG107843 OrthoDB:EOG44XJHN
EMBL:AB222111 RefSeq:NP_001104282.1 UniGene:Ptr.2608
ProteinModelPortal:A5A6I3 STRING:A5A6I3 GeneID:451007
KEGG:ptr:451007 InParanoid:A5A6I3 NextBio:20833681 Uniprot:A5A6I3
Length = 361
Score = 170 (64.9 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 63/276 (22%), Positives = 121/276 (43%)
Query: 8 GLTFKLHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQRGRTVE 67
G +LHP+++ +I D Y R +++ GA RV G ++G +VE
Sbjct: 93 GRVVRLHPVILASIVDSYER-RNE----------------GAA-RVIGTLLGTVDKHSVE 134
Query: 68 IFNSFELLYDPSTH--SLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKAL 125
+ N F + ++ S ++D F + EL+KKV P+ ILGWY+TG D E + IH+
Sbjct: 135 VTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYY 194
Query: 126 MDINESPVYVLLNPSINPAQKDLPVTIFESELHVIEGIPQ-LIFVRSSYTIETVEAERIS 184
+P+++ ++ S+ + + + + S L + G ++F + + ERI
Sbjct: 195 SREAPNPIHLTVDTSLQNGR--MSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIG 252
Query: 185 VDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIPCENXXXX 244
VD + +K + L++ L + A + + + Y + G++ +N
Sbjct: 253 VDLI--MKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGR 310
Query: 245 XXXXXXXXXPAIESEKFQ-------DDFLMVSLFSS 273
P I + F+ +D LMV+ ++
Sbjct: 311 FLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLAN 346
>UNIPROTKB|Q4R5B8 [details] [associations]
symbol:EIF3F "Eukaryotic translation initiation factor 3
subunit F" species:9541 "Macaca fascicularis" [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006413
GO:GO:0008234 GO:GO:0006508 GO:GO:0003743 GO:GO:0005852
InterPro:IPR024969 Pfam:PF13012 HAMAP:MF_03005 MEROPS:M67.974
HOVERGEN:HBG107843 OrthoDB:EOG44XJHN EMBL:AB169626
ProteinModelPortal:Q4R5B8 Uniprot:Q4R5B8
Length = 361
Score = 170 (64.9 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 63/276 (22%), Positives = 121/276 (43%)
Query: 8 GLTFKLHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQRGRTVE 67
G +LHP+++ +I D Y R +++ GA RV G ++G +VE
Sbjct: 93 GRVVRLHPVILASIVDSYER-RNE----------------GAA-RVIGTLLGTVDKHSVE 134
Query: 68 IFNSFELLYDPSTH--SLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKAL 125
+ N F + ++ S ++D F + EL+KKV P+ ILGWY+TG D E + IH+
Sbjct: 135 VTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYY 194
Query: 126 MDINESPVYVLLNPSINPAQKDLPVTIFESELHVIEGIPQ-LIFVRSSYTIETVEAERIS 184
+P+++ ++ S+ + + + + S L + G ++F + + ERI
Sbjct: 195 SREAPNPIHLTVDTSLQNGR--MSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIG 252
Query: 185 VDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIPCENXXXX 244
VD + +K + L++ L + A + + + Y + G++ +N
Sbjct: 253 VDLI--MKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGR 310
Query: 245 XXXXXXXXXPAIESEKFQ-------DDFLMVSLFSS 273
P I + F+ +D LMV+ ++
Sbjct: 311 FLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLAN 346
>UNIPROTKB|E1C050 [details] [associations]
symbol:EIF3F "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0003743 GO:GO:0005852 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00530000063075 KO:K03249 OMA:HPVVLFQ
CTD:8665 EMBL:AC140789 IPI:IPI00578336 RefSeq:XP_421624.1
PRIDE:E1C050 Ensembl:ENSGALT00000008544 GeneID:423748
KEGG:gga:423748 NextBio:20826172 Uniprot:E1C050
Length = 332
Score = 169 (64.5 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 63/275 (22%), Positives = 121/275 (44%)
Query: 8 GLTFKLHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQRGRTVE 67
G +LHP+V+ +I D + R +++ GA RV G ++G +VE
Sbjct: 64 GRVVRLHPVVLASIVDSFER-RNE----------------GAA-RVIGTLLGTVDKHSVE 105
Query: 68 IFNSFELLYDPSTH--SLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKAL 125
+ N F + ++ S ++D F + EL+KKV P ILGWY+TG D E + IH+
Sbjct: 106 VTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPSEIILGWYATGHDITEHSVLIHEYY 165
Query: 126 MDINESPVYVLLNPSINPAQKDLPVTIFESELHVIEGIPQLIFVRSSYTIETVEAERISV 185
+P+++ ++ S+ ++ + + + + V ++F + + ERI V
Sbjct: 166 SREAHNPIHLTVDTSLQNSRMSIKAYV-SAPMGVPGKTMGVMFTPLTVKYVYYDTERIGV 224
Query: 186 DHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIPCENXXXXX 245
D + +K + L++ L + SA + + ++ Y + G++ +N
Sbjct: 225 DLI--MKTCFSPNRVIGLSSDLQQVGSASARIQDTLGMVLQYAEDVLSGKVAADNTVGRF 282
Query: 246 XXXXXXXXPAIESEKFQ-------DDFLMVSLFSS 273
P I E F+ +D LMV+ ++
Sbjct: 283 LMDLINQVPKISPEDFETMLNSNINDLLMVTYLAN 317
>UNIPROTKB|B3KSH1 [details] [associations]
symbol:EIF3F "HCG1784554, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0003743 "translation initiation factor activity"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
EMBL:CH471064 GO:GO:0003743 InterPro:IPR024969 Pfam:PF13012
OMA:HPVVLFQ HOGENOM:HOG000241154 UniGene:Hs.516023 HGNC:HGNC:3275
HOVERGEN:HBG107843 EMBL:AC044810 EMBL:AC116456 EMBL:AK093511
IPI:IPI00654777 SMR:B3KSH1 IntAct:B3KSH1 STRING:B3KSH1
Ensembl:ENST00000537635 Uniprot:B3KSH1
Length = 372
Score = 170 (64.9 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 63/276 (22%), Positives = 121/276 (43%)
Query: 8 GLTFKLHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQRGRTVE 67
G +LHP+++ +I D Y R +++ GA RV G ++G +VE
Sbjct: 104 GRVVRLHPVILASIVDSYER-RNE----------------GAA-RVIGTLLGTVDKHSVE 145
Query: 68 IFNSFELLYDPSTH--SLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKAL 125
+ N F + ++ S ++D F + EL+KKV P+ ILGWY+TG D E + IH+
Sbjct: 146 VTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYY 205
Query: 126 MDINESPVYVLLNPSINPAQKDLPVTIFESELHVIEGIPQ-LIFVRSSYTIETVEAERIS 184
+P+++ ++ S+ + + + + S L + G ++F + + ERI
Sbjct: 206 SREAPNPIHLTVDTSLQNGR--MSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIG 263
Query: 185 VDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIPCENXXXX 244
VD + +K + L++ L + A + + + Y + G++ +N
Sbjct: 264 VDLI--MKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGR 321
Query: 245 XXXXXXXXXPAIESEKFQ-------DDFLMVSLFSS 273
P I + F+ +D LMV+ ++
Sbjct: 322 FLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLAN 357
>MGI|MGI:1913335 [details] [associations]
symbol:Eif3f "eukaryotic translation initiation factor 3,
subunit F" species:10090 "Mus musculus" [GO:0003743 "translation
initiation factor activity" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=ISO;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=ISO;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 MGI:MGI:1913335 GO:GO:0006413 GO:GO:0008234
GO:GO:0006508 EMBL:CH466531 GO:GO:0003743 eggNOG:COG1310
GO:GO:0005852 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00530000063075 KO:K03249 OMA:HPVVLFQ HAMAP:MF_03005
HOGENOM:HOG000241154 MEROPS:M67.974 CTD:8665 HOVERGEN:HBG107843
OrthoDB:EOG44XJHN EMBL:AK002778 EMBL:BC083190 IPI:IPI00120914
RefSeq:NP_079620.2 UniGene:Mm.182962 ProteinModelPortal:Q9DCH4
SMR:Q9DCH4 DIP:DIP-42766N IntAct:Q9DCH4 MINT:MINT-1899046
STRING:Q9DCH4 PhosphoSite:Q9DCH4 PaxDb:Q9DCH4 PRIDE:Q9DCH4
Ensembl:ENSMUST00000033342 GeneID:66085 KEGG:mmu:66085
InParanoid:Q5XJV3 ChiTaRS:EIF3F NextBio:320584 Bgee:Q9DCH4
Genevestigator:Q9DCH4 GermOnline:ENSMUSG00000031029 Uniprot:Q9DCH4
Length = 361
Score = 166 (63.5 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 62/276 (22%), Positives = 120/276 (43%)
Query: 8 GLTFKLHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQRGRTVE 67
G +LHP+++ +I D Y R +++ GA RV G ++G +VE
Sbjct: 93 GRVVRLHPVILASIVDSYER-RNE----------------GAA-RVIGTLLGTVDKHSVE 134
Query: 68 IFNSFELLYDPSTH--SLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKAL 125
+ N F + ++ S ++D F + EL+KKV P+ ILGWY+TG D E + IH+
Sbjct: 135 VTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYY 194
Query: 126 MDINESPVYVLLNPSINPAQKDLPVTIFESELHVIEGIPQ-LIFVRSSYTIETVEAERIS 184
+P+++ ++ + + + + + S L + G ++F + + ERI
Sbjct: 195 SREAPNPIHLTVDTGLQHGR--MSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIG 252
Query: 185 VDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIPCENXXXX 244
VD + +K + L++ L + A + + + Y + G++ +N
Sbjct: 253 VDLI--MKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGR 310
Query: 245 XXXXXXXXXPAIESEKFQ-------DDFLMVSLFSS 273
P I + F+ +D LMV+ ++
Sbjct: 311 FLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLAN 346
>SGD|S000005787 [details] [associations]
symbol:RPN8 "non-ATPase regulatory subunit of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034515 "proteasome storage granule" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 SGD:S000005787 EMBL:BK006948 GO:GO:0008541
GO:GO:0006511 eggNOG:COG1310 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00530000063075 RefSeq:NP_014907.3 GeneID:854437
KEGG:sce:YOR264W GO:GO:0034515 RefSeq:NP_014904.3 PDB:4B4T
PDBsum:4B4T GeneID:854435 KEGG:sce:YOR261C KO:K03038
HOGENOM:HOG000209236 OMA:RSIIALH MEROPS:M67.973 OrthoDB:EOG4QC4FM
EMBL:Z75169 EMBL:AY558039 PIR:S67158 ProteinModelPortal:Q08723
SMR:Q08723 DIP:DIP-1574N IntAct:Q08723 MINT:MINT-405204
STRING:Q08723 PaxDb:Q08723 PeptideAtlas:Q08723 EnsemblFungi:YOR261C
NextBio:976670 Genevestigator:Q08723 GermOnline:YOR261C
Uniprot:Q08723
Length = 338
Score = 154 (59.3 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 57/231 (24%), Positives = 105/231 (45%)
Query: 15 PLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQRGRTVEIFNSFEL 74
PLV+++ DHY R +++ N R G ++G T+ + NSF L
Sbjct: 12 PLVLLSALDHYERTQTKENK-----------------RCVGVILGDANSSTIRVTNSFAL 54
Query: 75 LYDPSTHS-----LDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKALMDIN 129
++ + LD ++E E+ KK+ ++GWY +G + SD+ I++
Sbjct: 55 PFEEDEKNSDVWFLDHNYIENMNEMCKKINAKEKLIGWYHSGPKLRASDLKINELFKKYT 114
Query: 130 ES-PVYVLLNPSINPAQKDLPVTIFESELHVIE-GIP-QLIFVRSSYTIETVEAERISVD 186
++ P+ ++++ + LP + + V + G + F+ TIE EAE I V+
Sbjct: 115 QNNPLLLIVD--VKQQGVGLPTDAYVAIEQVKDDGTSTEKTFLHLPCTIEAEEAEEIGVE 172
Query: 187 HVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIP 237
H+ D AA L+ LT ++K L S+++ + YL + E+P
Sbjct: 173 HLLR-DVRD--QAAGGLSIRLTNQLKSLKGLQSKLKDVVEYLDKVINKELP 220
>UNIPROTKB|G4MZL5 [details] [associations]
symbol:MGG_01432 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000555
Pfam:PF01398 EMBL:CM001232 RefSeq:XP_003714381.1
ProteinModelPortal:G4MZL5 EnsemblFungi:MGG_01432T0 GeneID:2679326
KEGG:mgr:MGG_01432 Uniprot:G4MZL5
Length = 421
Score = 116 (45.9 bits), Expect = 6.7e-07, Sum P(3) = 6.7e-07
Identities = 44/162 (27%), Positives = 75/162 (46%)
Query: 5 SSSGLTFKLHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIGIQRGR 64
S S L LHPLV++ +SD+ TR H+ G + G ++G Q G
Sbjct: 16 SDSELHVGLHPLVLLTVSDYITR------HT----------LRGQTCSIVGAILGQQNGT 59
Query: 65 TVEIFNSFELLYD--PSTH-SLDRAFLEKKQELYKKVFP--HFYILGWYSTGSDAQESD- 118
+ + ++FE L P+ SLD+ + + + K V + ++GW++ A
Sbjct: 60 KITMEHAFECLTQSLPNGDLSLDQDWFTNRLDQMKLVHKDRNLDLVGWFTLLPRAGPDQR 119
Query: 119 -MHIHKALMDINESPVYVLLNPS--INPAQKDLPVTIFESEL 157
+ +H ++ +NES + L+P A LPVTI+E+ L
Sbjct: 120 LLQLHNQILAVNESAALLALHPEDIAAAAGSKLPVTIYETVL 161
Score = 55 (24.4 bits), Expect = 6.7e-07, Sum P(3) = 6.7e-07
Identities = 12/27 (44%), Positives = 20/27 (74%)
Query: 202 QLAAHLTGIHSAIKMLNSRIRVLHHYL 228
+L + LT +AIKML++RI+++ YL
Sbjct: 275 ELVSTLTAKANAIKMLSARIQLITKYL 301
Score = 42 (19.8 bits), Expect = 6.7e-07, Sum P(3) = 6.7e-07
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 173 YTIETVEAERISVDHVA 189
Y++ET E E IS+ VA
Sbjct: 199 YSVETAEDEMISMAFVA 215
>UNIPROTKB|B4DEW9 [details] [associations]
symbol:EIF3F "Eukaryotic translation initiation factor 3
subunit F" species:9606 "Homo sapiens" [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0003743
GO:GO:0005852 InterPro:IPR024969 Pfam:PF13012 UniGene:Hs.516023
HGNC:HGNC:3275 HOVERGEN:HBG107843 EMBL:AC044810 EMBL:AC116456
EMBL:AK293826 IPI:IPI01013021 ProteinModelPortal:B4DEW9 SMR:B4DEW9
STRING:B4DEW9 PRIDE:B4DEW9 Ensembl:ENST00000449102
ArrayExpress:B4DEW9 Bgee:B4DEW9 Uniprot:B4DEW9
Length = 208
Score = 130 (50.8 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 43/195 (22%), Positives = 84/195 (43%)
Query: 87 FLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKALMDINESPVYVLLNPSINPAQK 146
F + EL+KKV P+ ILGWY+TG D E + IH+ +P+++ ++ S+ +
Sbjct: 3 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGR- 61
Query: 147 DLPVTIFESELHVIEGIPQ-LIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAA 205
+ + + S L + G ++F + + ERI VD + +K + L++
Sbjct: 62 -MSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLI--MKTCFSPNRVIGLSS 118
Query: 206 HLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIPCENXXXXXXXXXXXXXPAIESEKFQ--- 262
L + A + + + Y + G++ +N P I + F+
Sbjct: 119 DLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETML 178
Query: 263 ----DDFLMVSLFSS 273
+D LMV+ ++
Sbjct: 179 NSNINDLLMVTYLAN 193
>UNIPROTKB|B4DXI8 [details] [associations]
symbol:PSMD7 "26S proteasome non-ATPase regulatory subunit
7" species:9606 "Homo sapiens" [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 GO:GO:0000502
InterPro:IPR024969 Pfam:PF13012 HOVERGEN:HBG035951
UniGene:Hs.440604 HGNC:HGNC:9565 ChiTaRS:PSMD7 EMBL:AC009120
EMBL:AK301996 IPI:IPI01009629 SMR:B4DXI8 STRING:B4DXI8
Ensembl:ENST00000540379 Uniprot:B4DXI8
Length = 247
Score = 132 (51.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 42/178 (23%), Positives = 82/178 (46%)
Query: 94 LYKKVFPHFYILGWYSTGSDAQESDMHIHKALMDINESPVYVLLNPSINPAQKDLPVTIF 153
++KKV I+GWY TG ++D+ I++ + + V V+++ + P LP +
Sbjct: 4 MFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIID--VKPKDLGLPTEAY 61
Query: 154 ES--ELHVIEGIP-QLIFVRSSYTIETVEAERISVDHVAH-LKPSDGGSAATQLAAHLTG 209
S E+H +G P F + I EAE + V+H+ +K + G+ + ++ + G
Sbjct: 62 ISVEEVHD-DGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHG 120
Query: 210 IHSAIKMLNSRIRVLHHYLVAMQKGEIPCENXXXXXXXXXXXXXPAIESEKFQDDFLM 267
+ K LNS++ + YL + G++P + P + ++F F +
Sbjct: 121 L----KGLNSKLLDIRSYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEFVKAFYL 174
>TAIR|locus:2061206 [details] [associations]
symbol:EIF2 "AT2G39990" species:3702 "Arabidopsis
thaliana" [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009790 "embryo development" evidence=IMP] [GO:0009846 "pollen
germination" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0005829
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0009790 GO:GO:0003743 eggNOG:COG1310 GO:GO:0009846
EMBL:AF002109 InterPro:IPR024969 Pfam:PF13012 KO:K03249 OMA:HPVVLFQ
HAMAP:MF_03005 EMBL:U54561 EMBL:AY045824 EMBL:AY091363
IPI:IPI00527838 PIR:H84823 RefSeq:NP_181528.1 UniGene:At.10968
ProteinModelPortal:O04202 SMR:O04202 STRING:O04202 PaxDb:O04202
PRIDE:O04202 EnsemblPlants:AT2G39990.1 GeneID:818587
KEGG:ath:AT2G39990 GeneFarm:2126 TAIR:At2g39990
HOGENOM:HOG000241154 InParanoid:O04202 PhylomeDB:O04202
ProtClustDB:CLSN2683386 Genevestigator:O04202 GermOnline:AT2G39990
Uniprot:O04202
Length = 293
Score = 133 (51.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 67/282 (23%), Positives = 122/282 (43%)
Query: 2 ASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNHSSSAXXXXXXXXXGAQPRVYGCVIG-I 60
AS+++S LT ++HPLVI N+ D + R SA RV G ++G I
Sbjct: 19 ASATTSVLTARIHPLVIFNVCDCFVR------RPDSAE------------RVIGTLLGSI 60
Query: 61 QRGRTVEIFNSFELLYDPSTH--SLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQESD 118
TV+I NS+ + ++ S+ ++D + + KV I+GWYSTG+
Sbjct: 61 LPDGTVDIRNSYAVPHNESSDQVAVDIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGS 120
Query: 119 MHIHKALMDINESPVYVLLNPSINPAQKDLPVTIFESELHVIEGIPQLI--FVRSSYTIE 176
IH +P+++ ++ + + + S L + G QL+ F +
Sbjct: 121 SLIHDFYAREVPNPIHLTVDTGFTNGEGTIKAFV-SSNLSL--GDRQLVAHFQEIPVDLR 177
Query: 177 TVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEI 236
V+AER+ D LK ++ +L L G+ ++ L + I ++ Y+ ++ G+I
Sbjct: 178 MVDAERVGFDV---LK----ATSVDKLPNDLEGMELTMERLLTLINDVYKYVDSVVGGQI 230
Query: 237 PCENXXXXXXXXXXXXXPAIESEKFQDDFLMVSLFSSFLNIF 278
+N P + + F D+ + SL L ++
Sbjct: 231 APDNNIGRFIADAVASLPKLPPQVF-DNLVNDSLQDQLLLLY 271
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 283 261 0.00090 114 3 11 22 0.44 33
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 43
No. of states in DFA: 595 (63 KB)
Total size of DFA: 179 KB (2104 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.58u 0.13s 21.71t Elapsed: 00:00:01
Total cpu time: 21.59u 0.13s 21.72t Elapsed: 00:00:01
Start: Mon May 20 22:04:33 2013 End: Mon May 20 22:04:34 2013