Query 023365
Match_columns 283
No_of_seqs 166 out of 880
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 05:34:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023365.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023365hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfy_A OTU domain-containing p 100.0 8.5E-30 2.9E-34 223.6 7.9 101 165-276 48-148 (185)
2 3by4_A OTU1, ubiquitin thioest 99.9 2.4E-27 8.2E-32 211.0 9.8 98 172-281 16-116 (212)
3 3phx_A RNA-directed RNA polyme 99.9 1.4E-24 4.7E-29 190.0 9.6 95 175-276 30-124 (185)
4 3phu_A RNA-directed RNA polyme 99.9 4.1E-24 1.4E-28 192.0 9.4 95 175-276 30-124 (219)
5 1tff_A Ubiquitin thiolesterase 99.8 1E-18 3.4E-23 157.6 10.4 64 213-276 131-197 (234)
6 2zfy_A Ubiquitin thioesterase 99.7 1.2E-16 4.2E-21 143.6 12.8 64 213-276 134-200 (234)
7 4dhi_B Ubiquitin thioesterase 99.7 3.3E-16 1.1E-20 145.5 11.4 65 212-276 168-235 (284)
8 4ddg_A Ubiquitin-conjugating e 99.6 2.1E-15 7.1E-20 144.5 11.9 64 213-276 299-365 (399)
9 3zrh_A Ubiquitin thioesterase 97.4 0.00049 1.7E-08 67.3 9.2 100 174-277 187-301 (454)
10 3dkb_A Tumor necrosis factor, 97.4 0.00034 1.2E-08 67.3 7.4 100 174-276 110-233 (390)
11 3quf_A Extracellular solute-bi 49.2 3.6 0.00012 36.9 0.0 10 49-58 10-19 (414)
12 2zfy_A Ubiquitin thioesterase 46.8 6.7 0.00023 34.7 1.4 49 184-236 117-167 (234)
13 1zxt_A ORF K6, VMIP-I, functio 43.0 8.4 0.00029 28.7 1.2 26 5-30 50-76 (76)
14 4hw4_A Induced myeloid leukemi 37.6 28 0.00097 29.1 3.8 56 211-266 37-104 (157)
15 2nl9_A Fusion protein consisti 37.1 27 0.00093 28.8 3.6 55 212-266 38-104 (157)
16 2w3l_A BCL2-XL, apoptosis regu 35.8 42 0.0014 27.2 4.5 55 212-266 30-95 (144)
17 2vof_A BCL-2-related protein A 30.3 61 0.0021 26.7 4.7 54 213-266 38-104 (157)
18 1r2d_A Apoptosis regulator BCL 30.0 50 0.0017 29.3 4.3 56 211-266 84-150 (218)
19 3pk1_A Induced myeloid leukemi 29.3 53 0.0018 28.4 4.3 56 211-266 70-137 (189)
20 2ims_A Apoptosis regulator BAK 28.3 37 0.0013 28.4 3.0 56 211-266 57-123 (171)
21 1tff_A Ubiquitin thiolesterase 28.1 21 0.00071 31.6 1.5 49 184-236 114-164 (234)
22 4aq3_A Apoptosis regulator BCL 27.3 44 0.0015 28.3 3.3 56 211-266 53-119 (169)
23 1o0l_A Apoptosis regulator BCL 23.8 62 0.0021 27.5 3.6 54 213-266 47-111 (188)
24 3sp7_A BCL-2-like protein 1; a 23.1 64 0.0022 27.3 3.6 56 211-266 47-113 (172)
25 4a0g_A Adenosylmethionine-8-am 22.4 18 0.00063 37.3 0.0 31 164-194 220-251 (831)
26 3rdy_A BWI-1=protease inhibito 22.4 18 0.00063 27.4 0.0 11 23-33 3-13 (79)
27 3ilc_A BCL-2-like protein 1; a 20.0 78 0.0027 27.7 3.5 56 211-266 85-151 (197)
No 1
>3pfy_A OTU domain-containing protein 5; structural genomics, structural genomics consortium, SGC, PE C65 otubain, hydrolase; HET: MSE PG4; 1.70A {Homo sapiens} PDB: 3tmp_A* 3tmo_A*
Probab=99.96 E-value=8.5e-30 Score=223.58 Aligned_cols=101 Identities=20% Similarity=0.358 Sum_probs=76.3
Q ss_pred cchhhhhccCCeEEEEeCCCCchhhHHHHHhHhhcCCCCCCchHHHHHHHHHHHHHHHHHHhhChhhhhhhhcCCHHHHH
Q 023365 165 VKRCEIINERPFKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETEWFIEGDFDTYV 244 (283)
Q Consensus 165 ~~~~~kl~~~gL~I~~IpgDGNCLFRAIS~QL~~~~G~~~t~~~Lrq~~h~eLR~~VvdyL~~n~deFE~Fle~~fdeYc 244 (283)
++...+++.+||++++||+|||||||||++||+.. +..|.+||+.+++||++|++.|++|++++|++||
T Consensus 48 ~~~~~l~~~~gL~~~~I~~DGnCLFrAia~qL~g~-----------~~~h~~LR~~vv~yi~~n~d~f~~Fv~~~~e~Y~ 116 (185)
T 3pfy_A 48 WFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGD-----------QDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYI 116 (185)
T ss_dssp HHHHHHHHHHCCEEECCCCSTTHHHHHHHHHHHSC-----------GGGHHHHHHHHHHHHHHTHHHHTTCC--------
T ss_pred HHHHHHHHHCCcEEEeeCCCCChHHHHHHHHHhCC-----------chHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 35555567899999999999999999999999853 2468999999999999999999999999999999
Q ss_pred HhhcCCCccCCHHHHHHHHHhhCCcEEEEeCC
Q 023365 245 KEIQQPYVWGGEPELLMASHVLKDQINHPHMS 276 (283)
Q Consensus 245 ~~M~k~gtWGG~iEL~ALA~lL~v~I~V~~~s 276 (283)
++|+++++|||++||+|||++|+++|.||+.+
T Consensus 117 ~~m~~~~~WGg~iEL~AlS~~~~v~I~V~~~~ 148 (185)
T 3pfy_A 117 NRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYS 148 (185)
T ss_dssp ---------CCHHHHHHHHHHHTSCEEEESSC
T ss_pred HHhhCCCccchHHHHHHHHHhhCCcEEEEECC
Confidence 99999999999999999999999999999975
No 2
>3by4_A OTU1, ubiquitin thioesterase OTU1; ubiquitin hydrolase, deubiquitinase, cell cycle, hydrolase; 1.55A {Saccharomyces cerevisiae} PDB: 3c0r_A
Probab=99.94 E-value=2.4e-27 Score=210.99 Aligned_cols=98 Identities=27% Similarity=0.406 Sum_probs=87.5
Q ss_pred ccCCeEEEEeCCCCchhhHHHHHhHhhcCCCCCCchHHHHHHHHHHHHHHHHHHhhChhhh-hhhhcCCHHHHHHhhcCC
Q 023365 172 NERPFKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKET-EWFIEGDFDTYVKEIQQP 250 (283)
Q Consensus 172 ~~~gL~I~~IpgDGNCLFRAIS~QL~~~~G~~~t~~~Lrq~~h~eLR~~VvdyL~~n~deF-E~Fle~~fdeYc~~M~k~ 250 (283)
...+|++++||+|||||||||++|| +.. ..|.+||+.+++||++|++.| +.|++++|++||++|+++
T Consensus 16 ~~~~l~~~~i~~DGnCLFrAva~qL-~~~-----------~~~~~lR~~vv~yi~~n~d~f~e~~~~~~~e~Y~~~m~~~ 83 (212)
T 3by4_A 16 GENVLSVHPVLDDNSCLFHAIAYGI-FKQ-----------DSVRDLREMVSKEVLNNPVKFNDAILDKPNKDYAQWILKM 83 (212)
T ss_dssp CCSEEEEECCCCSTTHHHHHHHHHH-HSS-----------CCSHHHHHHHHHHHHHCTTTTCHHHHTSCHHHHHHHTTST
T ss_pred CCCCeEEEEeCCCCchHHHHHHHHh-CCc-----------hHHHHHHHHHHHHHHHCHHHHhhhhcCCCHHHHHHHhcCC
Confidence 3458999999999999999999999 531 357899999999999999999 577889999999999999
Q ss_pred CccCCHHHHHHHHHhhCCcEEEEeCC--ceeee
Q 023365 251 YVWGGEPELLMASHVLKDQINHPHMS--LLVEL 281 (283)
Q Consensus 251 gtWGG~iEL~ALA~lL~v~I~V~~~s--plve~ 281 (283)
++|||++||+|||++|+++|.||+.+ ++.++
T Consensus 84 ~~WGg~iEL~Als~~~~~~I~V~~~~~~~~~~~ 116 (212)
T 3by4_A 84 ESWGGAIEIGIISDALAVAIYVVDIDAVKIEKF 116 (212)
T ss_dssp TSCCCHHHHHHHHHHHTCEEEEEETTTTEEEEE
T ss_pred CEEccHHHHHHHHHHHCCCEEEEECCCCCeEEe
Confidence 99999999999999999999999965 45544
No 3
>3phx_A RNA-directed RNA polymerase L; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase-protein complex; 1.60A {Crimean-congo hemorrhagic fever virus} PDB: 3phw_A 3pt2_A 3pse_A 3prp_A 3prm_A
Probab=99.91 E-value=1.4e-24 Score=190.02 Aligned_cols=95 Identities=14% Similarity=0.196 Sum_probs=82.1
Q ss_pred CeEEEEeCCCCchhhHHHHHhHhhcCCCCCCchHHHHHHHHHHHHHHHHHHhhChhhhhhhhcCCHHHHHHhhcCCCccC
Q 023365 175 PFKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETEWFIEGDFDTYVKEIQQPYVWG 254 (283)
Q Consensus 175 gL~I~~IpgDGNCLFRAIS~QL~~~~G~~~t~~~Lrq~~h~eLR~~VvdyL~~n~deFE~Fle~~fdeYc~~M~k~gtWG 254 (283)
.+.+.+||+|||||||||++||+.+ .+... .+..|.+||+.+++||++|++. .+++++|++||++|+++++||
T Consensus 30 ~~~v~rv~gDGnCLFrAva~qL~~~--~~~~~---~~~~~~~LR~~~~~yi~~~~~~--~~~~~~~~~Y~~~m~~~~~WG 102 (185)
T 3phx_A 30 YFEIVRQPGDGNCFYHSIAELTMPN--KTDHS---YHYIKRLTESAARKYYQEEPEA--RLVGLSLEDYLKRMLSDNEWG 102 (185)
T ss_dssp HEEEECCCSSTTHHHHHHHHHHSTT--CCTTT---HHHHHHHHHHHHHHHGGGCTTH--HHHCCCHHHHHHHHTSTTCCC
T ss_pred CeEEEccCCCCchHHHHHHHHHhCC--Cccch---hhhHHHHHHHHHHHHHHhChHh--hhcCCCHHHHHHHhhCCCccC
Confidence 4899999999999999999999853 11111 1245999999999999999998 467899999999999999999
Q ss_pred CHHHHHHHHHhhCCcEEEEeCC
Q 023365 255 GEPELLMASHVLKDQINHPHMS 276 (283)
Q Consensus 255 G~iEL~ALA~lL~v~I~V~~~s 276 (283)
|++||+|||++|+++|+|++.+
T Consensus 103 g~iEL~Als~~~~v~I~V~~~d 124 (185)
T 3phx_A 103 STLEASMLAKEMGITIIIWTVA 124 (185)
T ss_dssp BHHHHHHHHHHHCCCEEEEEC-
T ss_pred cHHHHHHHHHHHCCcEEEEEec
Confidence 9999999999999999999864
No 4
>3phu_A RNA-directed RNA polymerase L; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase; 2.20A {Crimean-congo hemorrhagic fever VIRUSIBAR10200}
Probab=99.90 E-value=4.1e-24 Score=191.99 Aligned_cols=95 Identities=14% Similarity=0.196 Sum_probs=82.4
Q ss_pred CeEEEEeCCCCchhhHHHHHhHhhcCCCCCCchHHHHHHHHHHHHHHHHHHhhChhhhhhhhcCCHHHHHHhhcCCCccC
Q 023365 175 PFKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETEWFIEGDFDTYVKEIQQPYVWG 254 (283)
Q Consensus 175 gL~I~~IpgDGNCLFRAIS~QL~~~~G~~~t~~~Lrq~~h~eLR~~VvdyL~~n~deFE~Fle~~fdeYc~~M~k~gtWG 254 (283)
.|.+.+||+|||||||||++||+.+ .+... .+..|.+||+.+++||++|++. .+++++|++||++|+++++||
T Consensus 30 ~~~V~rvpgDGnCLFrAVs~qL~~~--~~~~~---~~~~h~~LR~~va~yi~~n~d~--~~~~~~feeY~~~m~~~g~WG 102 (219)
T 3phu_A 30 YFEIVRQPGDGNCFYHSIAELTMPN--KTDHS---YHYIKRLTESAARKYYQEEPEA--RLVGLSLEDYLKRMLSDNEWG 102 (219)
T ss_dssp HEEEECCCCSSCHHHHHHHHHHCTT--CCTTT---HHHHHHHHHHHHHHHGGGCHHH--HHHCCCHHHHHHHHHSTTCCC
T ss_pred ceEEEccCCCCchHHHHHHHHHhCC--Cccch---hhhHHHHHHHHHHHHHHhChhh--hhcCCCHHHHHHHhcCCCccC
Confidence 4899999999999999999999753 11111 1245999999999999999998 467899999999999999999
Q ss_pred CHHHHHHHHHhhCCcEEEEeCC
Q 023365 255 GEPELLMASHVLKDQINHPHMS 276 (283)
Q Consensus 255 G~iEL~ALA~lL~v~I~V~~~s 276 (283)
|++||+|||++|+++|+|++++
T Consensus 103 G~iEL~AlS~~~~v~I~V~~~d 124 (219)
T 3phu_A 103 STLEASMLAKEMGITIIIWTVA 124 (219)
T ss_dssp CHHHHHHHHHHTTCCEEEEEES
T ss_pred CHHHHHHHHHHhCCCEEEEEec
Confidence 9999999999999999999754
No 5
>1tff_A Ubiquitin thiolesterase protein OTUB2; hydrolase; 2.10A {Homo sapiens} SCOP: d.3.1.11
Probab=99.77 E-value=1e-18 Score=157.56 Aligned_cols=64 Identities=14% Similarity=0.134 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHhhChhhhhhhhcC--CHHHHHH-hhcCCCccCCHHHHHHHHHhhCCcEEEEeCC
Q 023365 213 LADELRAQVVDELLKRRKETEWFIEG--DFDTYVK-EIQQPYVWGGEPELLMASHVLKDQINHPHMS 276 (283)
Q Consensus 213 ~h~eLR~~VvdyL~~n~deFE~Fle~--~fdeYc~-~M~k~gtWGG~iEL~ALA~lL~v~I~V~~~s 276 (283)
....||..++.||++|+++|++|+++ +|++||+ .|+.+++|||++||+|||++|+++|+|++++
T Consensus 131 iv~~lR~lta~~i~~~~d~f~pFi~~~~~~~~yC~~~ve~~~~~~~~iei~ALa~aL~v~I~V~~~d 197 (234)
T 1tff_A 131 IVQFLRLLTSAFIRNRADFFRHFIDEEMDIKDFCTHEVEPMATECDHIQITALSQALSIALQVEYVD 197 (234)
T ss_dssp HHHHHHHHHHHHHHHTHHHHGGGSCTTSCHHHHHHHHTSSTTCCCCHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHHHHHHHHHCHHHHhhhhcCCCCHHHHHHHHhhhhhcccccHHHHHHHHHhCCCEEEEEcC
Confidence 45679999999999999999999976 8999999 7999999999999999999999999999875
No 6
>2zfy_A Ubiquitin thioesterase OTUB1; otubain, structural genomics, structural genomics consortium, SGC, alternative splicing, hydrolase, immune response; 1.69A {Homo sapiens} PDB: 4ddg_B 4ddi_A
Probab=99.69 E-value=1.2e-16 Score=143.64 Aligned_cols=64 Identities=22% Similarity=0.234 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHhhChhhhhhhhcC--CHHHHHH-hhcCCCccCCHHHHHHHHHhhCCcEEEEeCC
Q 023365 213 LADELRAQVVDELLKRRKETEWFIEG--DFDTYVK-EIQQPYVWGGEPELLMASHVLKDQINHPHMS 276 (283)
Q Consensus 213 ~h~eLR~~VvdyL~~n~deFE~Fle~--~fdeYc~-~M~k~gtWGG~iEL~ALA~lL~v~I~V~~~s 276 (283)
....||..+++||++|+++|++|+++ ++++||+ .++.+++|||++||+|||++|+++|+|++++
T Consensus 134 ~v~~lR~lta~yi~~~~d~f~pFi~~~~~~e~yc~~~ve~~~~~~~~i~i~ALa~al~v~I~V~~~d 200 (234)
T 2zfy_A 134 LVVYLRLLTSGYLQRESKFFEHFIEGGRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMD 200 (234)
T ss_dssp HHHHHHHHHHHHHHHTHHHHGGGCCSSCCHHHHHHHHTSSTTCCCCHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHHHHHHHHHCHHHHhcccCCCCCHHHHHHHHhhhHhhcCCHHHHHHHHHHhCCCEEEEEcC
Confidence 44589999999999999999999976 8999997 5999999999999999999999999999975
No 7
>4dhi_B Ubiquitin thioesterase otubain-like; ubiquitin E2 enzyme fold, ubiquitination, hydrolase-ligase C; 1.80A {Caenorhabditis elegans} PDB: 4dhj_A 4dhz_A
Probab=99.66 E-value=3.3e-16 Score=145.55 Aligned_cols=65 Identities=14% Similarity=0.078 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHhhChhhhhhhhcC--CHHHHHH-hhcCCCccCCHHHHHHHHHhhCCcEEEEeCC
Q 023365 212 ELADELRAQVVDELLKRRKETEWFIEG--DFDTYVK-EIQQPYVWGGEPELLMASHVLKDQINHPHMS 276 (283)
Q Consensus 212 ~~h~eLR~~VvdyL~~n~deFE~Fle~--~fdeYc~-~M~k~gtWGG~iEL~ALA~lL~v~I~V~~~s 276 (283)
....+||..++.||+.|+++|++|+++ ++++||+ +|+..++|||++||+|||++|+++|.|++++
T Consensus 168 ~iv~~LRllts~yi~~~~d~f~pFi~~~~~v~~yC~~eVe~~~~e~d~leI~ALa~aL~v~I~V~ylD 235 (284)
T 4dhi_B 168 YILMFFRLITSAFLKQNSEEYAPFIDEGMTVAQYCEQEIEPMWKDADHLAINSLIKAAGTRVRIEYMD 235 (284)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHGGGSCTTCCHHHHHHHHTSSTTCCCCHHHHHHHHHHTTCCEEEEESS
T ss_pred HHHHHHHHHHHHHHHHCHHHHHhhcCCCCCHHHHHHHhceehhhcccHHHHHHHHHHhCCcEEEEEec
Confidence 455689999999999999999999975 8999999 7999999999999999999999999999875
No 8
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.61 E-value=2.1e-15 Score=144.54 Aligned_cols=64 Identities=22% Similarity=0.234 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHhhChhhhhhhhcC--CHHHHHH-hhcCCCccCCHHHHHHHHHhhCCcEEEEeCC
Q 023365 213 LADELRAQVVDELLKRRKETEWFIEG--DFDTYVK-EIQQPYVWGGEPELLMASHVLKDQINHPHMS 276 (283)
Q Consensus 213 ~h~eLR~~VvdyL~~n~deFE~Fle~--~fdeYc~-~M~k~gtWGG~iEL~ALA~lL~v~I~V~~~s 276 (283)
....||..++.||+.|+++|++|+++ ++++||+ .|...++|||++||+|||+.|+++|.|++++
T Consensus 299 iv~~lRllts~~i~~~~d~f~pFi~~~~~v~~yc~~~ve~~~~e~d~l~I~ALa~al~v~I~V~yld 365 (399)
T 4ddg_A 299 LVVYLRLLTSGYLQRESKFFEHFIEGGRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMD 365 (399)
T ss_dssp HHHHHHHHHHHHHHHTHHHHGGGSSSSCCHHHHHHHHTSSTTCCBCHHHHHHHHHHHTCCCEEEECS
T ss_pred HHHHHHHHHHHHHHHCHHHHhcccCCCCCHHHHHHHhceeHHhhCcHHHHHHHHHHcCCcEEEEEcC
Confidence 56689999999999999999999986 7999999 8999999999999999999999999998754
No 9
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=97.39 E-value=0.00049 Score=67.30 Aligned_cols=100 Identities=18% Similarity=0.176 Sum_probs=67.7
Q ss_pred CCeEEEEeCCCCchhhHHHHHhHhhcCCCCCCchHHHHHHHHHHHHHHHHHHhhChhhhh---------hhh--c----C
Q 023365 174 RPFKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETE---------WFI--E----G 238 (283)
Q Consensus 174 ~gL~I~~IpgDGNCLFRAIS~QL~~~~G~~~t~~~Lrq~~h~eLR~~VvdyL~~n~deFE---------~Fl--e----~ 238 (283)
..|......||||||-+|++..+.+. .=.+-.||+..+.-|++.-. -+..+...+| .|. + .
T Consensus 187 ~rL~pL~t~GDGNCLLHAvSqamWGV---~DrdlvLRkaL~~~L~~~~~-~f~~RW~~~e~~q~q~~gL~y~lde~ewq~ 262 (454)
T 3zrh_A 187 SRLYALWNRTAGDCLLDSVLQATWGI---YDKDSVLRKALHDSLHDCSH-WFYTRWKDWESWYSQSFGLHFSLREEQWQE 262 (454)
T ss_dssp CCEEEBCCCCSSCHHHHHHHHTTTSS---CCGGGHHHHHHHHHHHHTHH-HHHHHHHHHHHHHHHHTTCCCCCCHHHHHH
T ss_pred cceeEeeecCCCccHHHHHHHHhhcc---cCCcHHHHHHHHHHHHhhhH-HHHHHHHHHHHHHHhhcCCcccccHHHHHH
Confidence 35777888999999999999999853 22344556666666654322 2333333222 221 2 3
Q ss_pred CHHHHHHhhcCCCccCCHHHHHHHHHhhCCcEEEEeCCc
Q 023365 239 DFDTYVKEIQQPYVWGGEPELLMASHVLKDQINHPHMSL 277 (283)
Q Consensus 239 ~fdeYc~~M~k~gtWGG~iEL~ALA~lL~v~I~V~~~sp 277 (283)
+|+.-++....||+==-++-+.+||++|++||+||...-
T Consensus 263 EW~~iv~~As~Pg~sLEeiHIFvLAhVLRRPIIV~~d~~ 301 (454)
T 3zrh_A 263 DWAFILSLASQPGASLEQTHIFVLAHILRRPIIVYGVKY 301 (454)
T ss_dssp HHHHHHHHTTSTTCCCCHHHHHHHHHHTTSCEEEEECSS
T ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHhcCCeEEecccc
Confidence 466666666778876678999999999999999998643
No 10
>3dkb_A Tumor necrosis factor, alpha-induced protein 3; OTU domain, DUB domain, apoptosis, cytoplasm, DNA-binding, hydrolase, metal-binding, nucleus; 2.50A {Homo sapiens} PDB: 2vfj_A
Probab=97.35 E-value=0.00034 Score=67.34 Aligned_cols=100 Identities=16% Similarity=0.181 Sum_probs=59.4
Q ss_pred CCeEEEEeCCCCchhhHHHHHhHhhcCCCCCCchHHHHHHHHHHHHHHHHHHhhChh----hhhhh-------hcC----
Q 023365 174 RPFKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRK----ETEWF-------IEG---- 238 (283)
Q Consensus 174 ~gL~I~~IpgDGNCLFRAIS~QL~~~~G~~~t~~~Lrq~~h~eLR~~VvdyL~~n~d----eFE~F-------le~---- 238 (283)
..|....+.||||||.+|++..+++... .+-.||+..+.-||+.....++.+.. .+..| .+.
T Consensus 110 ~rL~pL~t~GDGnCLLHAvSqamWGv~D---rdlvLRkaL~~~L~~~~~~~fr~RW~~e~~~~q~~~~~gL~y~e~ew~~ 186 (390)
T 3dkb_A 110 RKLVALKTNGDGNCLMHATSQYMWGVQD---TDLVLRKALFSTLKETDTRNFKFRWQLESLKSQEFVETGLCYDTRNWND 186 (390)
T ss_dssp CCEEEBCCCCSSCHHHHHHHHHHHSSCS---TTCHHHHHHHHHHHHSCCHHHHHHHHHHHHCCCSSCC----CCSSCSSH
T ss_pred cceEEEEecCCCchHHHHHhHHhcCCCC---HhHHHHHHHHHHHHhchHHHHHHHHHHHHHHhhhhHhhcccccHHHHHH
Confidence 3577778899999999999999996421 23344555555555433222222111 01112 222
Q ss_pred CHHHHHHhhcCCCc-------c--CCHHHHHHHHHhhCCcEEEEeCC
Q 023365 239 DFDTYVKEIQQPYV-------W--GGEPELLMASHVLKDQINHPHMS 276 (283)
Q Consensus 239 ~fdeYc~~M~k~gt-------W--GG~iEL~ALA~lL~v~I~V~~~s 276 (283)
+|+.-++....+.. + =-++-+.+||++|++||+||...
T Consensus 187 EW~~Iv~~Asp~~~~~~~~~~y~sLEeiHIFvLAhVLRRPIIV~~d~ 233 (390)
T 3dkb_A 187 EWDNLIKMASTDTPMARSGLQYNSLEEIHIFVLCNILRRPIIVISDK 233 (390)
T ss_dssp HHHHHHHHTSSCCCSSSSSCSSCCCCHHHHHHHHHHTTSCEEEEECC
T ss_pred HHHHHHHHhCCCCCCCCCcchhhhHHHHHHHHHHHHhcCCEEEEech
Confidence 35554544433211 1 23789999999999999999643
No 11
>3quf_A Extracellular solute-binding protein, family 1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Bifidobacterium longum subsp}
Probab=49.21 E-value=3.6 Score=36.92 Aligned_cols=10 Identities=20% Similarity=-0.174 Sum_probs=0.0
Q ss_pred cccccccccC
Q 023365 49 HSTACRLGVG 58 (283)
Q Consensus 49 ~~~~~~~~~~ 58 (283)
||+-|.+..+
T Consensus 10 ~~~~~~~l~~ 19 (414)
T 3quf_A 10 HSSGRENLYF 19 (414)
T ss_dssp ----------
T ss_pred ccccchhhhh
Confidence 5555655444
No 12
>2zfy_A Ubiquitin thioesterase OTUB1; otubain, structural genomics, structural genomics consortium, SGC, alternative splicing, hydrolase, immune response; 1.69A {Homo sapiens} PDB: 4ddg_B 4ddi_A
Probab=46.77 E-value=6.7 Score=34.70 Aligned_cols=49 Identities=6% Similarity=-0.229 Sum_probs=38.8
Q ss_pred CCchhhHHHHHhHhhcCCCCCCchHHHHHHHHHHHHHHHHHHhhChh--hhhhhh
Q 023365 184 DGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRK--ETEWFI 236 (283)
Q Consensus 184 DGNCLFRAIS~QL~~~~G~~~t~~~Lrq~~h~eLR~~VvdyL~~n~d--eFE~Fl 236 (283)
||+||++++.+|.... .....+|...+.+||.+..+|...-.+ .++.|.
T Consensus 117 ~~~~L~~~fndq~~s~----~~v~~lR~lta~yi~~~~d~f~pFi~~~~~~e~yc 167 (234)
T 2zfy_A 117 SVADLLASFNDQSTSD----YLVVYLRLLTSGYLQRESKFFEHFIEGGRTVKEFC 167 (234)
T ss_dssp CHHHHHHHHTSHHHHH----HHHHHHHHHHHHHHHHTHHHHGGGCCSSCCHHHHH
T ss_pred CHHHHHHHHHhhccch----HHHHHHHHHHHHHHHHCHHHHhcccCCCCCHHHHH
Confidence 9999999999998632 245677888999999999999987654 455554
No 13
>1zxt_A ORF K6, VMIP-I, functional macrophage inflammatory protein 1-ALPH; chemokine fold, greek KEY motif, signaling protein; 1.70A {Human herpesvirus 8}
Probab=42.96 E-value=8.4 Score=28.68 Aligned_cols=26 Identities=23% Similarity=0.517 Sum_probs=16.9
Q ss_pred cccccC-cchhhhhhhhhccccccccc
Q 023365 5 LCARHK-PWILNSISLLAHGSFAAHHQ 30 (283)
Q Consensus 5 ~~~~~~-~~~~~~~~~~~~~~~~~~~~ 30 (283)
+||-|+ ||+-..+..+..-..|||||
T Consensus 50 vCadP~~~WVq~~ik~l~~~~~~~~~~ 76 (76)
T 1zxt_A 50 ICADPSKNWVRQLMQRLPAIAHHHHHH 76 (76)
T ss_dssp EEECTTSHHHHHHHHTSCBCCCC----
T ss_pred EeCCCChHHHHHHHHHHHhhhhcccCC
Confidence 799554 69999998777666666654
No 14
>4hw4_A Induced myeloid leukemia cell differentiation Pro 1; anti-apoptotic protein, BH3 peptides, apoptosis; 1.53A {Homo sapiens} PDB: 3kj0_A 2pqk_A 3kj1_A 3kj2_A 3kz0_A 3mk8_A 2kbw_A 4hw3_A* 4hw2_A* 3d7v_A 3io9_A 2nl9_A* 2nla_A 4g35_A* 1wsx_A 2jm6_B 2roc_A 2rod_A 3mk8_B
Probab=37.56 E-value=28 Score=29.06 Aligned_cols=56 Identities=11% Similarity=0.105 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHhhChhhhhhhhc----------CCHHHHHHhhcCCC--ccCCHHHHHHHHHhh
Q 023365 211 RELADELRAQVVDELLKRRKETEWFIE----------GDFDTYVKEIQQPY--VWGGEPELLMASHVL 266 (283)
Q Consensus 211 q~~h~eLR~~VvdyL~~n~deFE~Fle----------~~fdeYc~~M~k~g--tWGG~iEL~ALA~lL 266 (283)
.+.+..||..+.+..++++..|+.++. ..|.+-+++|-++| .||-=+-|.+++-.+
T Consensus 37 ~~~~~~Lr~vgdele~~~~~~f~~m~~~L~it~~~a~~~F~~Va~elF~dGi~NWGRIVaLfaFgg~l 104 (157)
T 4hw4_A 37 RKALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFV 104 (157)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCSHHHHHHHHHHHHHHGGGSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHhccCCccHHHHHHHHHHHHHH
Confidence 467889999999999999999987753 13666667777888 799999999877654
No 15
>2nl9_A Fusion protein consisting of induced myeloid LEUK differentiation protein MCL-1 homolog...; apoptosis, MCL-1, BIM; HET: MSE; 1.55A {Rattus norvegicus} PDB: 2nla_A 3d7v_A 3io9_A 3kj0_A 2pqk_A 3kj1_A 3kj2_A 3kz0_A 3mk8_A 1wsx_A 2jm6_B 2roc_A 2rod_A 2kbw_A 3mk8_B
Probab=37.09 E-value=27 Score=28.79 Aligned_cols=55 Identities=11% Similarity=0.106 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHhhChhhhhhhhc-------CC---HHHHHHhhcCCC--ccCCHHHHHHHHHhh
Q 023365 212 ELADELRAQVVDELLKRRKETEWFIE-------GD---FDTYVKEIQQPY--VWGGEPELLMASHVL 266 (283)
Q Consensus 212 ~~h~eLR~~VvdyL~~n~deFE~Fle-------~~---fdeYc~~M~k~g--tWGG~iEL~ALA~lL 266 (283)
..+..||..+.++.++++..|..++. .+ |.+-.++|-++| .||-=+-|.+++-.+
T Consensus 38 ~~~~~Lr~i~dele~~~~~~f~~~~~~l~i~~~~~~~~f~~Va~elF~dGi~nWGRIValf~F~~~l 104 (157)
T 2nl9_A 38 RALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFV 104 (157)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHCCCSTTCCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHH
Confidence 67888999999999999999987752 22 666677888888 499999999988665
No 16
>2w3l_A BCL2-XL, apoptosis regulator BCL-2; HET: DRO; 2.10A {Homo sapiens} PDB: 2o2f_A*
Probab=35.80 E-value=42 Score=27.19 Aligned_cols=55 Identities=20% Similarity=0.175 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHhhChhhhhhhhc------C----CHHHHHHhhcCCC-ccCCHHHHHHHHHhh
Q 023365 212 ELADELRAQVVDELLKRRKETEWFIE------G----DFDTYVKEIQQPY-VWGGEPELLMASHVL 266 (283)
Q Consensus 212 ~~h~eLR~~VvdyL~~n~deFE~Fle------~----~fdeYc~~M~k~g-tWGG~iEL~ALA~lL 266 (283)
+.+..||....+..++++..|..++. + .|.+-.++|-++| +||--+-|.+++-.+
T Consensus 30 ~~~~~Lr~~gdele~~~~~~f~~~~~~l~i~~~~~~~~f~~Va~elF~dGinWGRIValf~F~g~l 95 (144)
T 2w3l_A 30 VVHKTLREAGDDFSRRYRRDFAEMSSGLHLTPFTARGRFATVVEELFRDGVNWGRIVAFFEFGGVM 95 (144)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHTTCCCCTTTHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCccHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 56788898888888888888876653 1 3555556666666 699999999887755
No 17
>2vof_A BCL-2-related protein A1; BH3, apoptosis, Pro-surviVal, mitochondrion, protein- complex; 1.8A {Mus musculus} PDB: 2vog_A 2voh_A* 2voi_A 3i1h_A 3mqp_A 2vm6_A
Probab=30.35 E-value=61 Score=26.69 Aligned_cols=54 Identities=13% Similarity=0.174 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHhhChhhhhhhhcC-----------CHHHHHHhhcCCC--ccCCHHHHHHHHHhh
Q 023365 213 LADELRAQVVDELLKRRKETEWFIEG-----------DFDTYVKEIQQPY--VWGGEPELLMASHVL 266 (283)
Q Consensus 213 ~h~eLR~~VvdyL~~n~deFE~Fle~-----------~fdeYc~~M~k~g--tWGG~iEL~ALA~lL 266 (283)
.+..||.....+.+++++.|..++.. .|.+-.++|-++| +||--+-|.+++-.+
T Consensus 38 ~~~~Lr~~~~ele~~~~~~f~~~~~~l~i~~~~~a~~~f~~Va~elF~dg~inWGRIVal~~F~g~l 104 (157)
T 2vof_A 38 ACRVLQRVAFSVQKEVEKNLKSYLDDFHVESIDTARIIFNQVMEKEFEDGIINWGRIVTIFAFGGVL 104 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHTTCCCCSHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 56778888888778888878766531 2556667888888 799999999987766
No 18
>1r2d_A Apoptosis regulator BCL-X; monomeric, alpha-helical; 1.95A {Homo sapiens} SCOP: f.1.4.1 PDB: 2b48_A 1r2i_A 1r2h_A 1r2g_A 1r2e_A 1bxl_A 1lxl_A 1maz_A 3cva_X 1ysg_A* 1ysi_A* 1ysn_A* 2o1y_A* 2yxj_A* 3pl7_A 3qkd_A* 1g5j_A 2lp8_A* 2lpc_A
Probab=29.99 E-value=50 Score=29.32 Aligned_cols=56 Identities=18% Similarity=0.216 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHhhChhhhhhhhc-------C---CHHHHHHhhcCCC-ccCCHHHHHHHHHhh
Q 023365 211 RELADELRAQVVDELLKRRKETEWFIE-------G---DFDTYVKEIQQPY-VWGGEPELLMASHVL 266 (283)
Q Consensus 211 q~~h~eLR~~VvdyL~~n~deFE~Fle-------~---~fdeYc~~M~k~g-tWGG~iEL~ALA~lL 266 (283)
+..+..||....++.++++..|..+.. . .|.+-.++|-++| +||--+-|.+++-.+
T Consensus 84 ~~v~~~Lr~lgdElE~~~~~~f~~m~~qL~it~~~a~~~F~~Va~elF~DGINWGRIVaLfaF~g~L 150 (218)
T 1r2d_A 84 AAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGAL 150 (218)
T ss_dssp HHHHHHHHHHHHHHHHHCCSTTHHHHHHHCCCTTCCHHHHHHHHGGGGTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 467889999999999999999988762 2 3555556666666 699999999987655
No 19
>3pk1_A Induced myeloid leukemia cell differentiation Pro 1; BCL-2 family fold, regulation of apoptosis, mitochondri apoptosis-apoptosis regulator complex; 2.49A {Homo sapiens}
Probab=29.29 E-value=53 Score=28.41 Aligned_cols=56 Identities=11% Similarity=0.112 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHhhChhhhhhhhc-------C---CHHHHHHhhcCCC--ccCCHHHHHHHHHhh
Q 023365 211 RELADELRAQVVDELLKRRKETEWFIE-------G---DFDTYVKEIQQPY--VWGGEPELLMASHVL 266 (283)
Q Consensus 211 q~~h~eLR~~VvdyL~~n~deFE~Fle-------~---~fdeYc~~M~k~g--tWGG~iEL~ALA~lL 266 (283)
.+.+..||..+.++.++++..|+.++. . .|.+-++.|-++| .||-=+-|.+++-.+
T Consensus 70 ~~~~~~Lr~vgdEle~~~~~~F~~m~~qL~it~~~a~~~F~~Va~elF~DGi~NWGRIVaLfaFgg~L 137 (189)
T 3pk1_A 70 RKALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFV 137 (189)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCSTTCCHHHHHHHHHHTTTSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHhccCCccHHHHHHHHHHHHHH
Confidence 467889999999999999999987763 1 3777777888888 799999999877655
No 20
>2ims_A Apoptosis regulator BAK; dimer; 1.48A {Homo sapiens} PDB: 2imt_A 2jcn_A 2yv6_A 3qbr_B* 2xpx_B 2jby_B 2voh_B*
Probab=28.31 E-value=37 Score=28.42 Aligned_cols=56 Identities=16% Similarity=0.121 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHhhChhhhhhhhc----------CCHHHHHHhhcCCC-ccCCHHHHHHHHHhh
Q 023365 211 RELADELRAQVVDELLKRRKETEWFIE----------GDFDTYVKEIQQPY-VWGGEPELLMASHVL 266 (283)
Q Consensus 211 q~~h~eLR~~VvdyL~~n~deFE~Fle----------~~fdeYc~~M~k~g-tWGG~iEL~ALA~lL 266 (283)
...+..||....++.++++..|..++. ..|.+-.++|-++| +||--+-|.+++-.+
T Consensus 57 ~~v~~~Lr~~gdele~~~~~~f~~m~~~l~~~~~~~~~~f~~Va~elF~dGinWGRIVal~~F~g~l 123 (171)
T 2ims_A 57 GQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIATSLFESGINWGRVVALLGFGYRL 123 (171)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHTTCCSSHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCcccHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHH
Confidence 345677888888888888888877753 13556666777777 699999999887665
No 21
>1tff_A Ubiquitin thiolesterase protein OTUB2; hydrolase; 2.10A {Homo sapiens} SCOP: d.3.1.11
Probab=28.14 E-value=21 Score=31.60 Aligned_cols=49 Identities=6% Similarity=-0.147 Sum_probs=38.4
Q ss_pred CCchhhHHHHHhHhhcCCCCCCchHHHHHHHHHHHHHHHHHHhhChh--hhhhhh
Q 023365 184 DGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRK--ETEWFI 236 (283)
Q Consensus 184 DGNCLFRAIS~QL~~~~G~~~t~~~Lrq~~h~eLR~~VvdyL~~n~d--eFE~Fl 236 (283)
|++||++++.+|...+ .....+|...+.+||++..+|...-.+ .++.|.
T Consensus 114 ~~~~L~~~fnd~~~s~----~iv~~lR~lta~~i~~~~d~f~pFi~~~~~~~~yC 164 (234)
T 1tff_A 114 SVSSLLKVFNDQSASD----HIVQFLRLLTSAFIRNRADFFRHFIDEEMDIKDFC 164 (234)
T ss_dssp CHHHHHHHHTSHHHHH----HHHHHHHHHHHHHHHHTHHHHGGGSCTTSCHHHHH
T ss_pred CHHHHHHHHhcccchh----hHHHHHHHHHHHHHHHCHHHHhhhhcCCCCHHHHH
Confidence 9999999999998643 235667889999999999999987644 455553
No 22
>4aq3_A Apoptosis regulator BCL-2, BCL-2-like protein 1; chimera; HET: 398; 2.40A {Homo sapiens} PDB: 1g5m_A 1gjh_A 1ysw_A* 2o21_A* 2o22_A*
Probab=27.27 E-value=44 Score=28.26 Aligned_cols=56 Identities=21% Similarity=0.195 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHhhChhhhhhhhc----------CCHHHHHHhhcCCC-ccCCHHHHHHHHHhh
Q 023365 211 RELADELRAQVVDELLKRRKETEWFIE----------GDFDTYVKEIQQPY-VWGGEPELLMASHVL 266 (283)
Q Consensus 211 q~~h~eLR~~VvdyL~~n~deFE~Fle----------~~fdeYc~~M~k~g-tWGG~iEL~ALA~lL 266 (283)
+..+..||....++.++++..|..++. ..|.+-.++|-++| .||-=+-|.+++-.+
T Consensus 53 ~~v~~~Lr~igdele~~~~~~f~~~~~~L~it~~~a~~~F~~Va~elF~dGiNWGRIVaLfaF~g~L 119 (169)
T 4aq3_A 53 EVVHLALRQAGDDFSRRYRGDFAEMSSQLHLTPFTARGRFATVVEELFRDGVNWGRIVAFFEFGGVM 119 (169)
T ss_dssp -CHHHHHHHHHHHHHHHTHHHHHHHHHHCCCCTTTHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 356788999999988899998877642 13666667777776 699999999887554
No 23
>1o0l_A Apoptosis regulator BCL-W; helical bundle, binding groove, BH3; NMR {Homo sapiens} SCOP: f.1.4.1
Probab=23.75 E-value=62 Score=27.49 Aligned_cols=54 Identities=20% Similarity=0.222 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHhhChhhhhhhhc------C----CHHHHHHhhcCCC-ccCCHHHHHHHHHhh
Q 023365 213 LADELRAQVVDELLKRRKETEWFIE------G----DFDTYVKEIQQPY-VWGGEPELLMASHVL 266 (283)
Q Consensus 213 ~h~eLR~~VvdyL~~n~deFE~Fle------~----~fdeYc~~M~k~g-tWGG~iEL~ALA~lL 266 (283)
.+..||....+..++|++.|..++. + .|.+-.+++-++| +||--+-|.+++-.+
T Consensus 47 v~~~Lr~~gdele~~~~~~f~~~~~~l~i~~~~~~~~F~~Va~elF~dGinWGRIValfaF~g~L 111 (188)
T 1o0l_A 47 LHQAMRAAGDEFETRFRRTFSDLAAQLHVTPGSAQQRFTQVSDELFQGGPNWGRLVAFFVFGAAL 111 (188)
T ss_dssp THHHHHHHHHHHHHHCSCSHHHHHHHTTTCSSTTHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhcCCCCccHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 4677888888888889988877753 1 2666667777666 699999999887655
No 24
>3sp7_A BCL-2-like protein 1; apoptosis regulator-inhibitor complex; HET: 03B; 1.40A {Homo sapiens} PDB: 2lp8_A* 2lpc_A 1ysg_A* 1ysi_A* 1ysn_A* 2o1y_A* 2yxj_A* 3pl7_A 3qkd_A* 1g5j_A 4ehr_A* 3spf_A* 2pon_B 3r85_A 2p1l_A 4a1u_A* 2yj1_A 2yq7_A 2yq6_A 3fdm_A ...
Probab=23.09 E-value=64 Score=27.29 Aligned_cols=56 Identities=18% Similarity=0.222 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHhhChhhhhhhhc-------C---CHHHHHHhhcCCC-ccCCHHHHHHHHHhh
Q 023365 211 RELADELRAQVVDELLKRRKETEWFIE-------G---DFDTYVKEIQQPY-VWGGEPELLMASHVL 266 (283)
Q Consensus 211 q~~h~eLR~~VvdyL~~n~deFE~Fle-------~---~fdeYc~~M~k~g-tWGG~iEL~ALA~lL 266 (283)
+..+..||....++.+++++.|..+.. . .|.+-.++|-++| .||-=+-|.+++-.+
T Consensus 47 ~~v~~~Lr~~gdelE~~~~~~f~~~~~qL~it~~~a~~~F~~Va~elF~dGinWGRIVaLfaF~g~l 113 (172)
T 3sp7_A 47 EAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGAL 113 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCSCHHHHTTCCTTCCHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 456788999998888899998877652 2 3555566777776 699999999887554
No 25
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=22.43 E-value=18 Score=37.34 Aligned_cols=31 Identities=13% Similarity=0.023 Sum_probs=20.2
Q ss_pred ccchhhhhccCCeEEEEeC-CCCchhhHHHHH
Q 023365 164 NVKRCEIINERPFKVTGVL-ADGRCLFRAIAH 194 (283)
Q Consensus 164 ~~~~~~kl~~~gL~I~~Ip-gDGNCLFRAIS~ 194 (283)
+.+..+..+.+++.+.-|. ..+-|+..++.-
T Consensus 220 ~~~~adla~~l~~PVILV~d~~lG~i~~~~lt 251 (831)
T 4a0g_A 220 GTLQCDLYRPFRLPGILVGDGRLGGISGTIAA 251 (831)
T ss_dssp SCBHHHHTGGGCCCEEEECCCSTTHHHHHHHH
T ss_pred CccHHHHHHHcCCCEEEEECCCCcHHHHHHHH
Confidence 3466777777888876653 355577776544
No 26
>3rdy_A BWI-1=protease inhibitor/trypsin inhibitor; serine protease inhibitor, potato inhibitor I, trypsin inhib trypsin, hydrolase inhibitor; 1.84A {Fagopyrum esculentum} SCOP: d.40.1.0 PDB: 3rdz_C
Probab=22.43 E-value=18 Score=27.42 Aligned_cols=11 Identities=45% Similarity=0.588 Sum_probs=0.5
Q ss_pred cccccccccee
Q 023365 23 GSFAAHHQNRF 33 (283)
Q Consensus 23 ~~~~~~~~~~~ 33 (283)
||.|||||+|-
T Consensus 3 ~~~~~~~~~~~ 13 (79)
T 3rdy_A 3 GSHHHHHHLRQ 13 (79)
T ss_dssp ----------C
T ss_pred ccccchhhhhc
Confidence 67777777764
No 27
>3ilc_A BCL-2-like protein 1; apoptosis, BH3 domain, alternative splicing, cytoplasm, membrane, mitochondrion, transmembrane; 1.64A {Mus musculus} PDB: 3ihd_A 2bzw_A 1pq1_A 1pq0_A 3ihc_A 3iih_A 1af3_A 3ihf_A 3ilb_A 3iig_A 3ihe_A
Probab=20.02 E-value=78 Score=27.72 Aligned_cols=56 Identities=18% Similarity=0.223 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHhhChhhhhhhhc-------C---CHHHHHHhhcCCC-ccCCHHHHHHHHHhh
Q 023365 211 RELADELRAQVVDELLKRRKETEWFIE-------G---DFDTYVKEIQQPY-VWGGEPELLMASHVL 266 (283)
Q Consensus 211 q~~h~eLR~~VvdyL~~n~deFE~Fle-------~---~fdeYc~~M~k~g-tWGG~iEL~ALA~lL 266 (283)
...+..||....++.++++..|..++. . .|.+-.++|-++| .||-=+-|.+++-.+
T Consensus 85 ~~V~~~Lr~lGdElE~~~~~~F~~m~~qL~it~~~a~~~F~~Va~elF~DGiNWGRIVaLfaFgg~L 151 (197)
T 3ilc_A 85 AAVKQALREAGDEFELRARRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGAL 151 (197)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCTTCCHHHHHHHHGGGGTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHhCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 367889999999999999998976642 2 3555556666666 699999999887554
Done!