BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>023366
MVAYANSHAFSYVPQVVREQREERKLFNQLENRGVIKPAEPYVCGVCGRRFYSNEKLVNH
FKQIHEREQKKRLNQIESARGKRRVHLVGKYSMKMEKYKRAARAILTPKIGYGLADELKR
AGFWVRTVSDKPQAADVALRNHMVDMMDKRHVECLVIVSDDSDFVDVLQEAKYRCLKTVV
VGDINDGALKRIADASFSWRDILMGKAKKEAVSVVGKWEDRDILKRLEWTYSPEVEKKAH
GWADGNKDADIDDATGANNADCIPKEDNGAWWELESSDAEAIS

High Scoring Gene Products

Symbol, full name Information P value
AT4G12240 protein from Arabidopsis thaliana 7.0e-93
AT5G52010 protein from Arabidopsis thaliana 7.5e-41

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  023366
        (283 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2139119 - symbol:AT4G12240 "AT4G12240" species...   925  7.0e-93   1
TAIR|locus:2173038 - symbol:AT5G52010 "AT5G52010" species...   434  7.5e-41   1


>TAIR|locus:2139119 [details] [associations]
            symbol:AT4G12240 "AT4G12240" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] [GO:0005739 "mitochondrion"
            evidence=IDA] InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028
            PROSITE:PS50157 SMART:SM00355 GO:GO:0005739 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0008270 GO:GO:0003700 EMBL:AL161533
            EMBL:AL080318 UniGene:At.48849 UniGene:At.66589 InterPro:IPR021139
            Pfam:PF01936 HOGENOM:HOG000240853 EMBL:BT005409 EMBL:AK118936
            IPI:IPI00531382 PIR:T48134 RefSeq:NP_192961.1
            ProteinModelPortal:Q9STI7 SMR:Q9STI7 EnsemblPlants:AT4G12240.1
            GeneID:826832 KEGG:ath:AT4G12240 TAIR:At4g12240 eggNOG:NOG321752
            InParanoid:Q9STI7 OMA:KRAGFWV PhylomeDB:Q9STI7
            ProtClustDB:CLSN2685569 Genevestigator:Q9STI7 Uniprot:Q9STI7
        Length = 364

 Score = 925 (330.7 bits), Expect = 7.0e-93, P = 7.0e-93
 Identities = 173/281 (61%), Positives = 215/281 (76%)

Query:     1 MVAYANSHAFSYVPQVVREQREERKLFNQLENRGVIKPAEPYVCGVCGRRFYSNEKLVNH 60
             M+AYAN HAFSYVP  VREQR++RKL N+LEN+G++KP EPY CGVC RRFY+NEKL+NH
Sbjct:    76 MMAYANRHAFSYVPLEVREQRKDRKLLNKLENKGLVKPPEPYFCGVCDRRFYTNEKLINH 135

Query:    61 FKQIHEREQKKRLNQIESARGKRRVHLVGKYSMKMEKYKRAARAILTPKIGYGLADELKR 120
             FKQIHE E +KR+ QIES++G RRV LV KYSMK+EKYKRAAR +LTPK GYGLADELKR
Sbjct:   136 FKQIHETENQKRMRQIESSKGHRRVRLVAKYSMKIEKYKRAARNVLTPKEGYGLADELKR 195

Query:   121 AGFWVRTVSDKPQAADVALRNHMVDMMDKRHVECLXXXXXXXXXXXXLQEAKYRCLKTVV 180
             AGFWV+ VSDKP AAD AL+ H+V++MDKR VEC+            L EAK RCL+TVV
Sbjct:   196 AGFWVKMVSDKPDAADKALKEHLVEVMDKREVECVVLVSDDSDFAGILWEAKERCLRTVV 255

Query:   181 VGDINDGALKRIADASFSWRDILMGKAKKEAVSVVGKWEDRDILKRLEWTYSPEVEKKAH 240
             +GD N+GALKR+AD ++SW+++ MGKAKKE   VVGKW+DRD+LK+LEWTY P +EK+  
Sbjct:   256 IGDSNEGALKRVADVAYSWKEVTMGKAKKEVEKVVGKWKDRDVLKKLEWTYDPALEKE-R 314

Query:   241 GWADGNKDADID-DATGANNADCIPKE--DNGAWWELESSD 278
             G + G  D + D D    N  +  P E  D   WW++++ D
Sbjct:   315 GGSCGVWDYEFDYDDEIENGTEVEPVEIGDGVDWWKIDTED 355


>TAIR|locus:2173038 [details] [associations]
            symbol:AT5G52010 "AT5G52010" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] InterPro:IPR007087 InterPro:IPR015880
            PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355 EMBL:CP002688
            GO:GO:0008270 GO:GO:0003700 GO:GO:0005622 EMBL:AB015478
            EMBL:AY039592 EMBL:AY129489 IPI:IPI00522595 RefSeq:NP_200014.1
            UniGene:At.9332 ProteinModelPortal:Q9FJ91 SMR:Q9FJ91 IntAct:Q9FJ91
            PRIDE:Q9FJ91 EnsemblPlants:AT5G52010.1 GeneID:835276
            KEGG:ath:AT5G52010 TAIR:At5g52010 HOGENOM:HOG000240853
            InParanoid:Q9FJ91 OMA:DNKPPRG PhylomeDB:Q9FJ91
            ProtClustDB:CLSN2687448 Genevestigator:Q9FJ91 Uniprot:Q9FJ91
        Length = 396

 Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
 Identities = 90/211 (42%), Positives = 133/211 (63%)

Query:     3 AYANSHAFSYVPQVVREQREERKLFNQLENRGVIKPAEPYVCGVCGRRFYSNEKLVNHFK 62
             AYAN HAF ++P  V E+R ER+  + +E +G + P +PY+CGVCGR+  +N  L  HFK
Sbjct:   113 AYANRHAFIHLPHWVVEERRERRNLDFMERKGEVTPIDPYICGVCGRKCKTNLDLKKHFK 172

Query:    63 QIHEREQKKRLNQIESARGKRRVHLVGKYSMKMEKYKRAARAILTPKIGYGLADELKRAG 122
             Q+HERE++K++N++ S +GK+R     +Y    EKY  AAR++LTPK+GYGL  EL+RAG
Sbjct:   173 QLHERERQKKVNRMRSLKGKKRQKFKERYVSGNEKYNEAARSLLTPKVGYGLEAELRRAG 232

Query:   123 FWVRTVSDKPQAADVALRNHMVDMMDKRHVECLXXXXXXXXXXXXLQEAKYRCLKTVVVG 182
              +V+TV DKPQAAD A++  +   M  R ++ L            L++A+   L T+VV 
Sbjct:   233 VYVKTVEDKPQAADWAVKRQIQHSMT-RGIDWLVLVSDDKDFSDMLRKAREADLGTLVVS 291

Query:   183 DINDGALKRIADASFSWRDILMGK-AKKEAV 212
             D+ D AL R AD    W  +  G+  +K+ +
Sbjct:   292 DM-DRALGRHADLWVPWSGVEKGEIGEKDLI 321


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.132   0.401    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      283       271   0.00098  114 3  11 22  0.50    33
                                                     32  0.40    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  608 (65 KB)
  Total size of DFA:  218 KB (2120 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.63u 0.10s 26.73t   Elapsed:  00:00:01
  Total cpu time:  26.63u 0.10s 26.73t   Elapsed:  00:00:01
  Start:  Mon May 20 22:15:59 2013   End:  Mon May 20 22:16:00 2013

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