BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023367
(283 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VWJ1|HPT1_ARATH Homogentisate phytyltransferase 1, chloroplastic OS=Arabidopsis
thaliana GN=VTE2-1 PE=2 SV=1
Length = 393
Score = 263 bits (671), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 150/296 (50%), Positives = 183/296 (61%), Gaps = 73/296 (24%)
Query: 12 LQVSRCKVWNIIDRTTVVKLERYHLKHHIR--GAKDRSIYHQKIKIKHLANAASGHPLQS 69
++V RC D + VV ++ + +R G + + K K + NA +G
Sbjct: 32 IRVLRC------DSSKVVAKPKFR-NNLVRPDGQGSSLLLYPKHKSRFRVNATAG----- 79
Query: 70 NQPDDYKPKSPLNSVINALDAFYRFSRPHTVIGTALSIVSVALLAVEKVSDISPLFFTGV 129
QP+ + S S ++LDAFYRFSRPHTVIGT LSI+SV+ LAVEKVSDISPL FTG+
Sbjct: 80 -QPEAFDSNSKQKSFRDSLDAFYRFSRPHTVIGTVLSILSVSFLAVEKVSDISPLLFTGI 138
Query: 130 LEAIAAALMMNIYIVGLNQLSDIEIDK-----LPL------------------------- 159
LEA+ AALMMNIYIVGLNQLSD+EIDK LPL
Sbjct: 139 LEAVVAALMMNIYIVGLNQLSDVEIDKVNKPYLPLASGEYSVNTGIAIVASFSIMSFWLG 198
Query: 160 ----------------------------LRWKRFAVAAAMCILAVRAVVVQLAFYLHMQT 191
LRWKRFA+ AAMCILAVRA++VQ+AFYLH+QT
Sbjct: 199 WIVGSWPLFWALFVSFMLGTAYSINLPLLRWKRFALVAAMCILAVRAIIVQIAFYLHIQT 258
Query: 192 HVYRRPAVFSKPLIFATAFMSFFSVVIALFKDVPDLEGDKTFGIRTFTVRLGQKRV 247
HV+ RP +F++PLIFATAFMSFFSVVIALFKD+PD+EGDK FGIR+F+V LGQKRV
Sbjct: 259 HVFGRPILFTRPLIFATAFMSFFSVVIALFKDIPDIEGDKIFGIRSFSVTLGQKRV 314
>sp|B7FA90|HPT1_ORYSJ Probable homogentisate phytyltransferase 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT1 PE=2 SV=1
Length = 404
Score = 249 bits (635), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 145/277 (52%), Positives = 172/277 (62%), Gaps = 65/277 (23%)
Query: 62 ASGHPLQSNQPDDYKPKSPLNSVINALDAFYRFSRPHTVIGTALSIVSVALLAVEKVSDI 121
ASG PLQS+ + + S + ++LDAFYRFSRPHTVIGTALSIVSV+LLAVE +SD+
Sbjct: 83 ASGQPLQSSA-EAHDSSSIWKPISSSLDAFYRFSRPHTVIGTALSIVSVSLLAVENLSDV 141
Query: 122 SPLFFTGVLEAIAAALMMNIYIVGLNQLSDIEIDK-----LPL----------------- 159
SPLF TG+LEA+ AAL MNIYIVGLNQL DIEIDK LPL
Sbjct: 142 SPLFLTGLLEAVVAALFMNIYIVGLNQLFDIEIDKVNKPTLPLASGEYSPATGVALVSAF 201
Query: 160 ------LRW------------------------------KRFAVAAAMCILAVRAVVVQL 183
L W KR AV AA+CILAVRAV+VQL
Sbjct: 202 AAMSFGLGWAVGSQPLFLALFISFILGTAYSINLPFLRWKRSAVVAALCILAVRAVIVQL 261
Query: 184 AFYLHMQTHVYRRPAVFSKPLIFATAFMSFFSVVIALFKDVPDLEGDKTFGIRTFTVRLG 243
AF+LH+QT V+RRPAVF++PLIFATAFM+FFSVVIALFKD+PD+EGD+ FGI++F+VRLG
Sbjct: 262 AFFLHIQTFVFRRPAVFTRPLIFATAFMTFFSVVIALFKDIPDIEGDRIFGIKSFSVRLG 321
Query: 244 QKRVSVLDLYFSTG--SSLYCCNFSWSNVSLCLEQTY 278
QK+V + G YC S CL Y
Sbjct: 322 QKKV----FWICVGLLEMAYCVAILMGATSACLWSKY 354
>sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase OS=Glycine max GN=G4DT PE=1
SV=1
Length = 409
Score = 130 bits (328), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 153/313 (48%), Gaps = 76/313 (24%)
Query: 27 TVVKLERYHLKHHIRGAKDRSIYHQKIKIKHLANAASGHPLQSNQPDDYKPKSPLNSVIN 86
V++ ++ L HH + + S Y Q+ K + A S PL + PK+ L+SV N
Sbjct: 54 NVLRFQQPSLDHHYKCIRGGSTY-QECNRKFVVKAISKQPL-GFEAHASNPKNILDSVKN 111
Query: 87 ALDAFYRFSRPHTVIGTALSIVSVALLA-------------------------------V 115
L AFY FS P+T+IG L S +LLA V
Sbjct: 112 VLSAFYWFSYPYTMIGITLCAFSSSLLAVEKLSDISLSFLIGVLQGVLPQLFIEIYLCGV 171
Query: 116 EKVSDIS---------PL------FFTGVLEAIAAA----------------LMMNIYIV 144
++ D+ P+ F TGV+ I+AA L+ N+ ++
Sbjct: 172 NQLYDLEIDKINKPHLPMASGQFSFKTGVI--ISAAFLALSFGFTWITGSWPLICNLVVI 229
Query: 145 GLNQLSDIEIDKLPLLRWKRFAVAAAMCILAVRAVVVQLAFYLHMQTHVYRRPAVFSKPL 204
+ + ID +PLLRWKR+ AAMC+++ A+ + ++++ HMQT V +RP F + L
Sbjct: 230 A-SSWTAYSID-VPLLRWKRYPFVAAMCMISTWALALPISYFHHMQTVVLKRPIGFPRSL 287
Query: 205 IFATAFMSFFSVVIALFKDVPDLEGDKTFGIRTFTVRLGQKR-----VSVLDLYFSTG-- 257
F AFM+F+S+ +AL KD+PD+EGDK GI +F VRLGQKR VS ++ F G
Sbjct: 288 GFLVAFMTFYSLGLALSKDIPDVEGDKEHGIDSFAVRLGQKRAFWICVSFFEMAFGVGIL 347
Query: 258 SSLYCCNFSWSNV 270
+ C +F W+ +
Sbjct: 348 AGASCSHF-WTKI 359
>sp|B1B3P3|N8DT1_SOPFL Naringenin 8-dimethylallyltransferase 1, chloroplastic OS=Sophora
flavescens GN=N8DT-1 PE=1 SV=1
Length = 410
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 139/278 (50%), Gaps = 63/278 (22%)
Query: 31 LERYHLKHH--IRGAKDRSIYHQKIKIKHLANAASGHPLQSNQPDDYKPKSPLNSVINAL 88
+++LK H + S ++ + K++ NA S + +P P+S +SV +AL
Sbjct: 56 FSKHNLKQHYKVNEGGSTSNTSKECEKKYVVNAISEQSFE-YEPQTRDPESIWDSVNDAL 114
Query: 89 DAFYRFSRPHTVIGTAL-----SIVSVALLA--------------------------VEK 117
D FY+F RP+ + L S+V+V L+ + +
Sbjct: 115 DIFYKFCRPYAMFTIVLGATFKSLVAVEKLSDLSLAFFIGWLQVVVAVICIHIFGVGLNQ 174
Query: 118 VSDIS--------------PLFFTGVLEAIAAALMMNI---YIVGLNQL----------- 149
+ DI L F V+ A++L++ + +IV L
Sbjct: 175 LCDIEIDKINKPDLPLASGKLSFRNVVIITASSLILGLGFAWIVDSWPLFWTVFISCMVA 234
Query: 150 SDIEIDKLPLLRWKRFAVAAAMCILAVRAVVVQLAFYLHMQTHVYRRPAVFSKPLIFATA 209
S +D LPLLRWK++ V A+ +A AV L F+LHMQT V++RP F +PLIF TA
Sbjct: 235 SAYNVD-LPLLRWKKYPVLTAINFIADVAVTRSLGFFLHMQTCVFKRPTTFPRPLIFCTA 293
Query: 210 FMSFFSVVIALFKDVPDLEGDKTFGIRTFTVRLGQKRV 247
+S +++VIALFKD+PD+EGD+ FGI++ ++RLG KRV
Sbjct: 294 IVSIYAIVIALFKDIPDMEGDEKFGIQSLSLRLGPKRV 331
>sp|Q1ACB3|HPT2_ARATH Homogentisate phytyltransferase 2, chloroplastic OS=Arabidopsis
thaliana GN=HPT2 PE=2 SV=1
Length = 386
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 122/282 (43%), Gaps = 78/282 (27%)
Query: 43 AKDRSIYHQKIKIKHLANAASGHPLQSNQPDDYKPKSPLNSVINALDAFYRFSRPHTVIG 102
+K S ++KI I+ + + +S+ P L+ + +A +RF RPHT+ G
Sbjct: 56 SKFVSTNYRKISIRACSQVGAA---ESDDPV-------LDRIARFQNACWRFLRPHTIRG 105
Query: 103 TALSIVSVALLAVEKVSDISPLFFTGVLEAIAAALMM-----------NIYIVGLNQLS- 150
TAL S AL+ + + + ++ VL+A++ L + IY +G+++++
Sbjct: 106 TALG--STALVTRALIENTHLIKWSLVLKALSGLLALICGNGYIVGINQIYDIGIDKVNK 163
Query: 151 --------DIEIDK---------------------------------------LPLLRWK 163
D+ + +P LR K
Sbjct: 164 PYLPIAAGDLSVQSAWLLVIFFAIAGLLVVGFNFGPFITSLYSLGLFLGTIYSVPPLRMK 223
Query: 164 RFAVAAAMCILAVRAVVVQLAFYLHMQTHVYRRPAVFSKPLIFATAFMSFFSVVIALFKD 223
RF VAA + I VR ++ Y H P +S P+ F T+F++ F++VIA+ KD
Sbjct: 224 RFPVAAFLIIATVRGFLLNFGVY-HATRAALGLPFQWSAPVAFITSFVTLFALVIAITKD 282
Query: 224 VPDLEGDKTFGIRTFTVRLGQKRVSVLDLYFSTGSSLYCCNF 265
+PD+EGD+ F I T +LG + ++ L GS L N+
Sbjct: 283 LPDVEGDRKFQISTLATKLGVRNIAFL------GSGLLLVNY 318
>sp|Q0D576|HPT2_ORYSJ Probable homogentisate phytyltransferase 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT2 PE=3 SV=2
Length = 379
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 18/134 (13%)
Query: 153 EIDKLPLLRWKRFAVAAAMCILAVRAVVVQLAFYLHMQTHVYRRPAV-----FSKPLIFA 207
I +P R KR+ VAA + I VR F L+ + R A+ +S P+ F
Sbjct: 206 TIYSVPPFRLKRYPVAAFLIIATVRG------FLLNFGVYYATRAALGLTFQWSSPVAFI 259
Query: 208 TAFMSFFSVVIALFKDVPDLEGDKTFGIRTFTVRLGQKRVSVLDLYFSTGSSLYCCNFSW 267
T F++ F++VIA+ KD+PD+EGD+ + I T +LG + ++ L GS L N+
Sbjct: 260 TCFVTLFALVIAITKDLPDVEGDRKYQISTLATKLGVRNIAFL------GSGLLIANYVA 313
Query: 268 S-NVSLCLEQTYHR 280
+ V+ + Q + R
Sbjct: 314 AIAVAFLMPQAFRR 327
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 79 SPLNSVINAL-DAFYRFSRPHTVIGTAL-SIVSVALLAVEKVSDISPLFFTGVLEAIAAA 136
+PL+ ++ L D+ +RF RPHT+ GTAL SI VA +E I+ + A
Sbjct: 74 APLSKTLSDLKDSCWRFLRPHTIRGTALGSIALVARALIENPQLINWWLVFKAFYGLVAL 133
Query: 137 LMMNIYIVGLNQLSDIEIDKL 157
+ N YIVG+NQ+ DI IDK+
Sbjct: 134 ICGNGYIVGINQIYDIRIDKV 154
>sp|Q8TZM7|DGGGP_PYRFU Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1963 PE=3 SV=1
Length = 277
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 81/212 (38%), Gaps = 51/212 (24%)
Query: 88 LDAFYRFSRPHTVIGTALSIVSVALLAVEKVSDISPL--FFTGVLEAIAAALMMNIYIVG 145
+ F RPH I + + AL+A E + DI L F V + N Y
Sbjct: 3 VKGFIEIMRPHNCILAGIVGILGALVAYEGIPDIKTLTLIFWVVYFGCSGGNTANDYF-- 60
Query: 146 LNQLSDIEIDKL-----PLLRWKRFAVAAAMCILAVRAVVVQLAFYLHMQTHVYRRPAVF 200
D EIDK+ PL R AA L A+ LA++L+++ V+ A F
Sbjct: 61 -----DYEIDKINRPNRPLPRGAMSRRAALYYALLQYAIGSILAYFLNIRAFVFATIAYF 115
Query: 201 S--------KPL-------------------------IFATAFMSFFSVVI----ALFKD 223
KPL I +++ + ++ + KD
Sbjct: 116 LTFLYGWKLKPLPLVGNITVAALTAATPIYGAIGVGRIGLAGYLAICAFLVNVSREIMKD 175
Query: 224 VPDLEGDKTFGIRTFTVRLGQKRVSVLDLYFS 255
+ D+EGDK G RT + +G+K+ +++ F
Sbjct: 176 IEDIEGDKALGARTLPIIIGEKKAAIIAAIFG 207
>sp|Q5BIR3|THSD1_BOVIN Thrombospondin type-1 domain-containing protein 1 OS=Bos taurus
GN=THSD1 PE=2 SV=1
Length = 849
Score = 39.7 bits (91), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 213 FFSVVIALFKDVPDLEGDKTFGIRTFTVRLGQKRVSVLDLYFSTGSSLYCCNFSWSNVS 271
F VIA+FK+ P L G++T + ++ LG++R F G + YC +F S+ S
Sbjct: 266 FVQGVIAVFKEAPRLPGERTNRLAENSLALGERRTGFNCTLFDMGRNKYCFDFGVSSQS 324
>sp|Q971A3|DGGGP_SULTO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
GN=STK_14510 PE=3 SV=1
Length = 278
Score = 39.3 bits (90), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 52/206 (25%)
Query: 87 ALDAFYRFSRPHTVIGTALSIVSVALLAVE-KVSDISPLFFTGVLEAIAAALMMNIYIVG 145
++ A++ R H VIG+A+S+ ++A E K+ I + V+ IAA YI+
Sbjct: 2 SVKAYFELVRIHNVIGSAISVFMGYVVASEWKIVPIKLILAMIVVSVIAAGG----YII- 56
Query: 146 LNQLSDIEIDK-------LPLLRWK----------RFAVAAAMCILA-----VRAVVVQL 183
N + DIEIDK LP R K F V + +L + A++ L
Sbjct: 57 -NDVFDIEIDKINKPNRPLPSGRIKISRARSLSIVLFLVGIVLSVLLNIYAFIIALLTVL 115
Query: 184 AFYLHMQ-------------------THVYRRPAVFSKPLIF----ATAFMSFFSVVIAL 220
A Y + + + Y A F + T ++ FF++
Sbjct: 116 ALYYYAKDLKKQGLVGNLIVALTSALSAFYGGLAFFEGSWVIRTLIPTLYIFFFTLTREF 175
Query: 221 FKDVPDLEGDKTFGIRTFTVRLGQKR 246
K + D++GD T G++T VR+G ++
Sbjct: 176 VKGIEDVKGDMTNGVKTLAVRVGIEK 201
>sp|A2SRL0|DGGGP_METLZ Digeranylgeranylglyceryl phosphate synthase OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
GN=Mlab_0795 PE=3 SV=1
Length = 282
Score = 38.1 bits (87), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 220 LFKDVPDLEGDKTFGIRTFTVRLGQKRVSVLDLYFSTGSSLYCCNF----SWSNVSLCLE 275
L KD D+EGD+ G RT +++G ++ SVL + F + L C+F +W V L L
Sbjct: 172 LLKDAEDIEGDRLGGARTLPMQIGVRKTSVLAVIFVLFAVL--CSFVPFLTWGVVYLVLI 229
Query: 276 QTYHRF 281
F
Sbjct: 230 GVVDAF 235
>sp|Q4J8K2|DGGGP_SULAC Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=Saci_1565 PE=3 SV=1
Length = 275
Score = 37.7 bits (86), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 49/202 (24%)
Query: 87 ALDAFYRFSRPHTVIGTALSIVSVALLAVEKVSDISPLFFTGVLEAIAAALMMNIYIVGL 146
++ A+ R H V+G+A+S ++A +PLFF +L + + + Y++
Sbjct: 2 SVKAYLELIRVHNVVGSAVSAFMGYVIATTW--KFTPLFFLPLL--VVSLIAAGGYVI-- 55
Query: 147 NQLSDIEIDK-------LPLLRW-----KRFAVA--AAMCILAVRAVVVQLAFYLHMQTH 192
N + DIE+DK LP R +RF++ A I+++ ++ F L
Sbjct: 56 NDVYDIEVDKINKPERPLPSGRIAVNIARRFSIVLFAVGLIISIPLGLIPFGFALITIVL 115
Query: 193 VYRRPAVFSK-----------------------------PLIFATAFMSFFSVVIALFKD 223
+Y K I T ++ FF++ K
Sbjct: 116 LYEYARSLKKLGLVGNFIVALTSALSAYYGGLASGSLLGNFIIPTIYIFFFTLSREFVKG 175
Query: 224 VPDLEGDKTFGIRTFTVRLGQK 245
+ D+EGDK G+ T V+LG+K
Sbjct: 176 IEDIEGDKRNGVNTLAVKLGEK 197
>sp|B1L6Z7|DGGGP_KORCO Digeranylgeranylglyceryl phosphate synthase OS=Korarchaeum
cryptofilum (strain OPF8) GN=Kcr_1480 PE=3 SV=1
Length = 281
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 201 SKPLIFATAFMSFFSVVIALF-KDVPDLEGDKTFGIRTFTVRLGQKRVSVLDLYFS 255
+K +IF++ ++F S +I F K V DL GD+ G+RT VR+G KR +L S
Sbjct: 154 NKVIIFSS--VAFTSNLIREFVKAVEDLPGDRAHGVRTIAVRIGVKRTGILVFLLS 207
>sp|O57753|DGGGP_PYRHO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=PH0027 PE=3 SV=1
Length = 277
Score = 35.0 bits (79), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 220 LFKDVPDLEGDKTFGIRTFTVRLGQKRVSVLDLYFS 255
+ KD+ D EGDK G RT + +G+K+ ++ F
Sbjct: 172 IMKDIEDFEGDKRLGARTLPIMIGKKKSGIIASIFG 207
>sp|Q9JM61|THSD1_MOUSE Thrombospondin type-1 domain-containing protein 1 OS=Mus musculus
GN=Thsd1 PE=2 SV=2
Length = 851
Score = 35.0 bits (79), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 213 FFSVVIALFKDVPDLEGDKTFGIRTFTVRLGQKRVSVLDLYFSTGSSLYCCNF 265
F V+A++K+ P ++TF + + LG++R F G + YC NF
Sbjct: 267 FVQGVLAVYKEAPKRPEERTFQVAENRLPLGERRTVFNCTLFDVGKNKYCFNF 319
>sp|Q46BD9|DGGGP_METBF Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=Mbar_A1863 PE=3
SV=1
Length = 289
Score = 34.3 bits (77), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 222 KDVPDLEGDKTFGIRTFTVRLGQKRVSVL 250
KD+ D+EGDK G T +R+G K+ S L
Sbjct: 190 KDIEDMEGDKMEGADTLPLRVGAKKASYL 218
>sp|Q3INH7|DGGGP_NATPD Digeranylgeranylglyceryl phosphate synthase OS=Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678) GN=NP_4470A
PE=3 SV=1
Length = 277
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 182 QLAFYLHMQTHVYRRPAVFSK--PLIFATAFMSFFSVVIALFKDVPDLEGDKTFGIRTFT 239
L YL T +Y AV ++ A + ++ + KDV D++GD+ G+RT
Sbjct: 133 ALVAYLTGSTFLYGGAAVGGDLAAVVVLFALAACATMAREIVKDVEDIDGDRAEGLRTLP 192
Query: 240 VRLGQKR 246
+ +G++R
Sbjct: 193 IVIGERR 199
>sp|Q9NS62|THSD1_HUMAN Thrombospondin type-1 domain-containing protein 1 OS=Homo sapiens
GN=THSD1 PE=1 SV=1
Length = 852
Score = 33.9 bits (76), Expect = 1.3, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 212 SFFSVVIALFKDVPDLEGDKTFGIRTFTVRLGQKRVSVLDLYFSTGSSLYCCNFSWSNVS 271
+F V+ +FK+ P G +T + ++ LG++R F G + YC +F S+ S
Sbjct: 266 TFVQGVVTVFKEAPRYPGKRTIHLAENSLPLGERRTIFNCTLFDMGKNKYCFDFGISSRS 325
>sp|C6A2C9|DGGGP_THESM Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
sibiricus (strain MM 739 / DSM 12597) GN=TSIB_0711 PE=3
SV=1
Length = 279
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 191 THVYRRPAVFSKPLIFATAFMSFF-SVVIALFKDVPDLEGDKTFGIRTFTVRLGQKRVSV 249
T +Y AV L A +F +V +FKD+ D+EGDK G +T + G + S
Sbjct: 142 TPIYGAIAVGKIGLAGYLALCAFLVNVAREIFKDIEDIEGDKAQGAKTLPIVWGIESSSK 201
Query: 250 LDLYFSTGS 258
+ + FS +
Sbjct: 202 IGVIFSVAT 210
>sp|Q5R7R7|THSD1_PONAB Thrombospondin type-1 domain-containing protein 1 OS=Pongo abelii
GN=THSD1 PE=2 SV=1
Length = 853
Score = 33.5 bits (75), Expect = 2.0, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 212 SFFSVVIALFKDVPDLEGDKTFGIRTFTVRLGQKRVSVLDLYFSTGSSLYCCNFSWSNVS 271
+F V+ +FK+ P G +T + ++ LG++R F G + YC +F S+ S
Sbjct: 266 TFVQGVVTVFKEAPRSPGKRTIHLAENSLPLGERRTIFNCTLFDMGKNKYCFDFGISSRS 325
>sp|Q9V2P5|DGGGP_PYRAB Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB00300 PE=3 SV=2
Length = 277
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 220 LFKDVPDLEGDKTFGIRTFTVRLGQKRVSVLDLYFST 256
+ KD+ D+EGD G +T + +G++R +++ F
Sbjct: 172 IMKDIEDIEGDMKMGAKTLPIIIGKRRAAMISSIFGV 208
>sp|A7I9E7|DGGGP_METB6 Digeranylgeranylglyceryl phosphate synthase OS=Methanoregula boonei
(strain 6A8) GN=Mboo_1843 PE=3 SV=1
Length = 279
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 220 LFKDVPDLEGDKTFGIRTFTVRLGQKRVSVL 250
L KD D+EGD+ G T +R+G ++ +++
Sbjct: 172 LLKDAEDIEGDRAHGADTLAIRIGVRKTALI 202
>sp|A1S477|DEOD_SHEAM Purine nucleoside phosphorylase DeoD-type OS=Shewanella amazonensis
(strain ATCC BAA-1098 / SB2B) GN=deoD PE=3 SV=1
Length = 236
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 99 TVIGTALSIVSVALLAVEKVSD--ISPLFFTGVLEAIAAALMMNIYIVGLNQLSDIEIDK 156
+V+G+ + I S ++ A E + D + L G AI+ + + I+G+ +D ++++
Sbjct: 59 SVMGSGMGIPSCSIYATELIKDYGVKNLIRVGTCGAISTDVKVRDVIIGMGACTDSQVNR 118
Query: 157 LPLLRWKRFAVAAAMCILAVRAVVVQLAFYLHMQTHVYRRPAVFSKPLIF 206
L + + FA A +L + VV+ A +QT V VFS L +
Sbjct: 119 LR-FKGQDFAAIADYSLL---SAVVESAKTHGIQTRVGN---VFSADLFY 161
>sp|B8FXS7|GLPK_DESHD Glycerol kinase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM
10664) GN=glpK PE=3 SV=1
Length = 494
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 40/96 (41%)
Query: 20 WNIIDRTTVVKLERYHLKHHIRGAKDRSIYHQKIKIKHLANAASGHPLQSNQPDDYKPKS 79
W++ R +V L R K+HI A S+ +Q I A S PLQ + D +
Sbjct: 355 WDMDARGAIVGLTRGSNKNHIIRAALESMAYQTRDILEAMEADSQLPLQLLKVDGGAVVN 414
Query: 80 PLNSVINALDAFYRFSRPHTVIGTALSIVSVALLAV 115
L A RPH + TAL +A LA+
Sbjct: 415 NLLMQFQADILGVEVERPHCIETTALGAAYLAGLAI 450
>sp|Q5JDN5|DGGGP_PYRKO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=TK1957 PE=3 SV=1
Length = 277
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 187 LHMQTHVYRRPAVFSKPLIFATAFMSFF-SVVIALFKDVPDLEGDKTFGIRTFTVRLGQK 245
L T +Y AV L A +F +V + KD+ D+EGD G +T + +G+K
Sbjct: 138 LTGATPLYGAIAVGEIGLAGTLALCAFLVNVAREVIKDIEDIEGDMAKGAKTLPILIGRK 197
Query: 246 RVSVLDLYFS 255
R + + F+
Sbjct: 198 RAAYVGALFA 207
>sp|A5ULR8|DGGGP_METS3 Digeranylgeranylglyceryl phosphate synthase OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=Msm_0941
PE=3 SV=1
Length = 283
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Query: 204 LIFATAFMSFFSVVIA----LFKDVPDLEGDKTFGIRTFTVRLGQK 245
+I+ + ++FF++++ + KD+ D+EGD G +TF + G K
Sbjct: 155 IIYESYLLAFFALIMTTAREITKDIEDMEGDMAEGAKTFPILYGPK 200
>sp|Q9HRP0|DGGGP_HALSA Digeranylgeranylglyceryl phosphate synthase OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=VNG_0610G PE=3 SV=2
Length = 276
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 183 LAFYLHMQTHVYRRPAVFSKPLIFATAFMSFFSVVI-ALFKDVPDLEGDKTFGIRTFTVR 241
L YL T V+ AV S A ++ S + KDV DL GD+ G+RT V
Sbjct: 135 LVAYLGGSTFVFGAAAVGSPLAGGVLAALAALSTFAREVIKDVEDLAGDRAAGLRTLPVV 194
Query: 242 LGQKR 246
+G +R
Sbjct: 195 VGHQR 199
>sp|B0R3S1|DGGGP_HALS3 Digeranylgeranylglyceryl phosphate synthase OS=Halobacterium
salinarum (strain ATCC 29341 / DSM 671 / R1) GN=OE_1921R
PE=3 SV=1
Length = 276
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 183 LAFYLHMQTHVYRRPAVFSKPLIFATAFMSFFSVVI-ALFKDVPDLEGDKTFGIRTFTVR 241
L YL T V+ AV S A ++ S + KDV DL GD+ G+RT V
Sbjct: 135 LVAYLGGSTFVFGAAAVGSPLAGGVLAALAALSTFAREVIKDVEDLAGDRAAGLRTLPVV 194
Query: 242 LGQKR 246
+G +R
Sbjct: 195 VGHQR 199
>sp|B6YW76|DGGGP_THEON Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
onnurineus (strain NA1) GN=TON_1950 PE=3 SV=1
Length = 276
Score = 31.6 bits (70), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 220 LFKDVPDLEGDKTFGIRTFTVRLGQKRVSVLDLYFS 255
+ KD+ D+EGD G +T + G+KR + + + F+
Sbjct: 172 VIKDIEDVEGDMAKGAKTLPIIWGKKRAAYVGVLFA 207
>sp|Q12VF3|DGGGP_METBU Digeranylgeranylglyceryl phosphate synthase OS=Methanococcoides
burtonii (strain DSM 6242) GN=Mbur_1679 PE=3 SV=1
Length = 281
Score = 31.2 bits (69), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 222 KDVPDLEGDKTFGIRTFTVRLGQKRVS 248
KDV D+ GDK G RT + +G K+ S
Sbjct: 182 KDVEDIVGDKKDGARTLPILIGAKKAS 208
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.138 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,767,915
Number of Sequences: 539616
Number of extensions: 3754536
Number of successful extensions: 11468
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 11429
Number of HSP's gapped (non-prelim): 47
length of query: 283
length of database: 191,569,459
effective HSP length: 116
effective length of query: 167
effective length of database: 128,974,003
effective search space: 21538658501
effective search space used: 21538658501
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)