BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023368
(283 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9F234|AGL2_BACTQ Alpha-glucosidase 2 OS=Bacillus thermoamyloliquefaciens PE=3 SV=1
Length = 787
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 157 SLYGTGEVSGQLERTGKRIFTWNTDSWG-YGTETTSLYQSHPWVLAVLPNGEALGVLADT 215
YG GE +G L++ G+ + WNTD + + ET LYQSHP+ + V NG A G+ D
Sbjct: 148 HFYGFGEKTGFLDKRGETMTMWNTDVYAPHNPETDPLYQSHPYFMTVR-NGSAHGIFFDN 206
Query: 216 TRRCEIDLRKESTIQFTAPSSYPVITFGPFTSPT 249
T + D + +T ++ + I + F PT
Sbjct: 207 TYKTTFDFQT-ATDEYCFSAEGGAIDYYVFAGPT 239
>sp|P31434|XYLS_ECOLI Alpha-xylosidase OS=Escherichia coli (strain K12) GN=yicI PE=1 SV=2
Length = 772
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 14/155 (9%)
Query: 102 DCSASDRQAAYPSLSFVNGKDRDTPISTRTRPSYTPTFQCVRGQQIVKLEFPAGTSLYGT 161
+ SA + + SL F+ +R T + Y R +L+ G ++YG
Sbjct: 107 NLSARVSKGEFWSLDFLRNGERITGSQVKNN-GYVQDTNNQRNYMFERLDLGVGETVYGL 165
Query: 162 GEVSGQLERTGKRIFTWNTDSWGYGTETTSLYQSHPWVLAVLPNGEALGVLADTTR--RC 219
GE L R G+ + TWN D GT T Y++ P+ + GVL + +
Sbjct: 166 GERFTALVRNGQTVETWNRDG---GTSTEQAYKNIPFYMT----NRGYGVLVNHPQCVSF 218
Query: 220 EIDLRKESTIQFTAPSSY--PVITFGPFTSPTAVL 252
E+ K S +QF+ S Y + GP +P AVL
Sbjct: 219 EVGSEKVSKVQFSVESEYLEYFVIDGP--TPKAVL 251
>sp|Q043W1|OBG_LACGA GTPase obg OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243)
GN=obg PE=3 SV=1
Length = 428
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 140 QCVRGQQIVKLEFPAGTSLY--GTGEVSGQLERTGKRIFTWNTDSWGYGT 187
Q RG + V+L+ P GTS+Y TGE+ G L + G+ + G G
Sbjct: 77 QYGRGAKDVRLKVPMGTSVYDFNTGELLGDLVKNGQELVVARGGKGGIGN 126
>sp|D0KQM8|AGLU_SULS9 Alpha-glucosidase OS=Sulfolobus solfataricus (strain 98/2) GN=malA
PE=1 SV=1
Length = 700
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 147 IVKLEFPAGTSLYGTGEVSGQLERTGKRIFTWNTDSWGYGTETTSLYQSHPWVLAVLPNG 206
IV+ + G GE + +L+R KR +N D+ Y LY S P ++V +G
Sbjct: 53 IVEKSLDLKEHIIGLGEKAFELDRKRKRYVMYNVDAGAYKKYQDPLYVSIPLFISV-KDG 111
Query: 207 EALGVLADTTRRCEIDL 223
A G ++ + D+
Sbjct: 112 VATGYFFNSASKVIFDV 128
>sp|P0CD66|AGLU_SULSO Alpha-glucosidase OS=Sulfolobus solfataricus (strain ATCC 35092 /
DSM 1617 / JCM 11322 / P2) GN=malA PE=1 SV=1
Length = 693
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 147 IVKLEFPAGTSLYGTGEVSGQLERTGKRIFTWNTDSWGYGTETTSLYQSHPWVLAVLPNG 206
IV+ + G GE + +L+R KR +N D+ Y LY S P ++V +G
Sbjct: 53 IVEKSLDLKEHIIGLGEKAFELDRKRKRYVMYNVDAGAYKKYQDPLYVSIPLFISV-KDG 111
Query: 207 EALGVLADTTRRCEIDL 223
A G ++ + D+
Sbjct: 112 VATGYFFNSASKVIFDV 128
>sp|A1SLX8|CAAL2_NOCSJ Carboxylate-amine ligase Noca_3311 OS=Nocardioides sp. (strain
BAA-499 / JS614) GN=Noca_3311 PE=3 SV=1
Length = 369
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 52/141 (36%), Gaps = 20/141 (14%)
Query: 77 AIASSDVVSGDMIFEPVLEEGVFRFDCSASDRQAAYPSLSFVNGKDRDTPISTRTRPSYT 136
A A ++V + + VL++G+ FD AS R +P++ R + R +
Sbjct: 195 AAAYQELVERVLAAQVVLDQGMLYFDARASHR---FPTVEI-----RVADVCLDVRDTVL 246
Query: 137 PTFQCVRGQQIVKLEFPAGTSLYGTGEVSGQLERTGKRIFTWNTDSWGYGTETTSLYQSH 196
C + + + GE Q+ R+ TW+ WG + +
Sbjct: 247 IAALC-------RALVETSAARWAAGEAPPQVPAVLLRLATWHASRWGVSADLLDPMTAR 299
Query: 197 PWVLAVLPNGEALGVLADTTR 217
P LP E +G L + R
Sbjct: 300 P-----LPAAEVVGRLVEHAR 315
>sp|Q65914|SPIKE_ADECT Fiber protein OS=Canine adenovirus serotype 2 (strain Toronto A
26-61) GN=L5 PE=1 SV=1
Length = 542
Score = 31.6 bits (70), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 5/59 (8%)
Query: 166 GQLERTGK--RIFTWNTDSWGYGTETTSLYQSHPWVLAVLPNGEALGVLADTTRRCEID 222
GQL TG TW WG T SH W L +PN E A T RC +D
Sbjct: 428 GQLMSTGNINSTTTWGEKPWG--NNTVQPRPSHTWKLC-MPNREVYSTPAATISRCGLD 483
>sp|Q43763|AGLU_HORVU Alpha-glucosidase OS=Hordeum vulgare PE=2 SV=1
Length = 877
Score = 31.6 bits (70), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 152 FPAG-TSLYGTGE--VSGQLERTGKRIFTWNTDSWGYGTETTSLYQSHPWVLAVLPNGEA 208
PAG SLYG GE S R WN D G +LY SHP+ + V G A
Sbjct: 168 LPAGRASLYGLGEHTKSSFRLRHNDSFTLWNADI-GASYVDVNLYGSHPFYMDVRAPGTA 226
Query: 209 LGVL 212
GVL
Sbjct: 227 HGVL 230
>sp|O30166|Y070_ARCFU Uncharacterized protein AF_0070 OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_0070 PE=4 SV=1
Length = 353
Score = 31.2 bits (69), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 15 GTPVGIPRHEFTASSYSSSNSKLNKFDRRGL-FALTTTGTRATSHLFSSIRKR 66
G+PV + +FT S N+ + KF G+ FA+ + HL IRKR
Sbjct: 148 GSPVKVSISDFTLSVLGHINATIRKFSNMGMIFAIPSPTRTRILHLIGEIRKR 200
>sp|Q6ZRK6|CCD73_HUMAN Coiled-coil domain-containing protein 73 OS=Homo sapiens GN=CCDC73
PE=2 SV=2
Length = 1079
Score = 31.2 bits (69), Expect = 9.9, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 25/135 (18%)
Query: 23 HEFTASSYSSSNSKLNKFDRRGLFALTTTGTRATSHLFSSIRKRSASRIVMAAEAIASSD 82
H T + SN K N+ D + T T+ LF SI +R + + + + +D
Sbjct: 797 HMKTCTETEFSNKK-NQIDENQV----TEATKNDLFLFVSINERQHTLLNNTEKTESLND 851
Query: 83 VVSGDMIFEPVLEE----------------GVFRFDCSASDRQA----AYPSLSFVNGKD 122
+VSG M E LEE G FD S SD++ Y + S
Sbjct: 852 IVSGKMFSEGQLEESHSFHIEPSGDLVNRSGRSTFDLSTSDKKTEKTPVYMNFSDPGPWS 911
Query: 123 RDTPISTRTRPSYTP 137
+ I ++T S TP
Sbjct: 912 KVNHIESQTASSSTP 926
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.130 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,172,839
Number of Sequences: 539616
Number of extensions: 4055871
Number of successful extensions: 8636
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 8632
Number of HSP's gapped (non-prelim): 20
length of query: 283
length of database: 191,569,459
effective HSP length: 116
effective length of query: 167
effective length of database: 128,974,003
effective search space: 21538658501
effective search space used: 21538658501
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)