Your job contains 1 sequence.
>023374
MALQEKLDRFKKQQEKCQETLSNIAAKSGASRATTTSRPTPAAASTAARSSPPVKFSNDT
ERLQHINSIRKSPVGAQIKRVIDRLLETRQAFTPEEINRDCYVDVNANKAVFDSLRNNPK
VHYDGKRFSYKSKHDLKDKSQLLVLVRKFPEGIAVIDLKDSYPTVMEDLQALKAAGQIWL
LSNFDSQEDIAYPNDPRVPIKADDDLKLLFRDIALPSDMLDIEKDLQKNGMKPATNTQKR
RAAAQIQGISSKNKPKKKKHEISKRTKLTNAHLPELFQKLNGS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023374
(283 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2128580 - symbol:AT4G20330 species:3702 "Arabi... 853 3.0e-85 1
TAIR|locus:2133139 - symbol:AT4G21010 species:3702 "Arabi... 706 1.1e-69 1
DICTYBASE|DDB_G0287307 - symbol:gtf2e2 "transcription ini... 200 4.7e-16 1
POMBASE|SPCC1672.08c - symbol:tfa2 "transcription factor ... 165 8.8e-11 1
UNIPROTKB|Q5ZIE1 - symbol:GTF2E2 "Uncharacterized protein... 147 2.3e-08 1
UNIPROTKB|E2R5J2 - symbol:GTF2E2 "Uncharacterized protein... 146 3.2e-08 1
UNIPROTKB|F1MUX7 - symbol:GTF2E2 "General transcription f... 145 4.1e-08 1
UNIPROTKB|Q2KJF9 - symbol:GTF2E2 "General transcription f... 145 4.1e-08 1
RGD|1310134 - symbol:Gtf2e2 "general transcription factor... 143 6.6e-08 1
MGI|MGI:1915403 - symbol:Gtf2e2 "general transcription fa... 143 7.6e-08 1
UNIPROTKB|F1RX65 - symbol:GTF2E2 "Uncharacterized protein... 137 9.0e-08 1
UNIPROTKB|P29084 - symbol:GTF2E2 "Transcription initiatio... 139 2.3e-07 1
ASPGD|ASPL0000029003 - symbol:AN5498 species:162425 "Emer... 136 5.5e-07 1
ZFIN|ZDB-GENE-030131-6794 - symbol:gtf2e2 "general transc... 133 1.2e-06 1
WB|WBGene00010054 - symbol:F54D5.11.2 species:6239 "Caeno... 122 2.5e-05 1
UNIPROTKB|G5EG47 - symbol:TFIIE-beta "TFIIE-beta protein"... 122 2.5e-05 1
SGD|S000001770 - symbol:TFA2 "TFIIE small subunit" specie... 121 4.3e-05 1
FB|FBgn0015829 - symbol:TfIIEbeta "Transcription factor I... 114 0.00022 1
UNIPROTKB|G4N6W7 - symbol:MGG_06509 "Transcription initia... 109 0.00097 1
>TAIR|locus:2128580 [details] [associations]
symbol:AT4G20330 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005673 "transcription
factor TFIIE complex" evidence=IEA] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=IEA]
[GO:0000394 "RNA splicing, via endonucleolytic cleavage and
ligation" evidence=RCA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=RCA] InterPro:IPR003166
InterPro:IPR016656 PIRSF:PIRSF016398 PROSITE:PS51351 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161552 GO:GO:0003743 GO:GO:0006367
EMBL:AL080253 GO:GO:0005673 KO:K03137 eggNOG:COG5174 OMA:RCQSSLA
UniGene:At.3546 UniGene:At.65820 HOGENOM:HOG000243420
ProtClustDB:CLSN2685336 EMBL:AF385715 EMBL:AY078018 EMBL:AY099713
EMBL:AY463608 IPI:IPI00528101 PIR:G85230 RefSeq:NP_193766.1
ProteinModelPortal:Q9SUP3 STRING:Q9SUP3 PaxDb:Q9SUP3 PRIDE:Q9SUP3
EnsemblPlants:AT4G20330.1 GeneID:827781 KEGG:ath:AT4G20330
TAIR:At4g20330 InParanoid:Q9SUP3 PhylomeDB:Q9SUP3
Genevestigator:Q9SUP3 Uniprot:Q9SUP3
Length = 286
Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 175/284 (61%), Positives = 207/284 (72%)
Query: 1 MALQEKLDRFKKQQEKCQETLSNIAAKSGXXXXXXXXXXXXXXXXXXXXXXXXVKFSNDT 60
MAL+E+LD+F KQQ KCQ TLS+IA+ VKFS+DT
Sbjct: 1 MALKEQLDKFNKQQVKCQSTLSSIASSRERTSSSRQNVPLPAAITQKKPDAAPVKFSSDT 60
Query: 61 ERLQHINSIRKSPVGAQIKRVIDRLLETRQAFTPEEINRDCYVDVNANKAVFDSLRNNPK 120
ERLQ+IN+IRK+PVGAQIKRVID L E R A TPE+IN C+VD++ANKAVFDSLR NPK
Sbjct: 61 ERLQNINNIRKAPVGAQIKRVIDLLYERRLALTPEQINEWCHVDMHANKAVFDSLRKNPK 120
Query: 121 VHYDGKRFSYKSKHDLKDKSQLLVLVRKFPEGIAVIDLKDSYPTVMEDLQALKAAGQIWL 180
HYDG+RFSYK+ HD+ DK+QLL LVRK+ +GIAV+DLKD+YP VMEDL+AL A+G I+L
Sbjct: 121 AHYDGRRFSYKATHDVNDKNQLLSLVRKYLDGIAVVDLKDAYPNVMEDLKALSASGDIYL 180
Query: 181 LSNFDSQEDIAYPNDPRVPIKADDDLKLLFRDIALPSDMLDIEKDLQKNGMKPATNTQKR 240
LSN SQEDIAYPND + IK DD+ K LFRDI +P+DMLD+EK+L K G+KPATNT +R
Sbjct: 181 LSN--SQEDIAYPNDFKCEIKVDDEFKALFRDINIPNDMLDVEKELLKIGLKPATNTAER 238
Query: 241 RAAAQIQGIXXX-XXXXXXXXXXXXRTKLTNAHLPELFQKLNGS 283
RAAAQ GI RTKLTNAHLPELFQ LNGS
Sbjct: 239 RAAAQTHGISNKPKDKKKKKQEISKRTKLTNAHLPELFQNLNGS 282
>TAIR|locus:2133139 [details] [associations]
symbol:AT4G21010 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005673 "transcription
factor TFIIE complex" evidence=IEA] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR003166 InterPro:IPR016656 PIRSF:PIRSF016398
PROSITE:PS51351 EMBL:CP002687 EMBL:AL080282 EMBL:AL161554
GO:GO:0003743 GO:GO:0006367 GO:GO:0005673 KO:K03137 EMBL:AY133707
IPI:IPI00528608 PIR:T10643 RefSeq:NP_193833.1 UniGene:At.32675
ProteinModelPortal:Q9SUB3 STRING:Q9SUB3 EnsemblPlants:AT4G21010.1
GeneID:827848 KEGG:ath:AT4G21010 TAIR:At4g21010
HOGENOM:HOG000243420 InParanoid:Q9SUB3 OMA:NAHMPEL PhylomeDB:Q9SUB3
ProtClustDB:CLSN2685336 Genevestigator:Q9SUB3 Uniprot:Q9SUB3
Length = 275
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 150/280 (53%), Positives = 190/280 (67%)
Query: 1 MALQEKLDRFKKQQEKCQETLSNIAAKSGXXXXXXXXXXXXXXXXXXXXXXXXVKFSNDT 60
MAL+E+LD+F KQQEKCQ TLS+I++ KFS +T
Sbjct: 1 MALREQLDKFNKQQEKCQSTLSSISSSRTALSRSYVPAATTSQKPNVFRG----KFSENT 56
Query: 61 ERLQHINSIRKSPVGAQIKRVIDRLLETRQAFTPEEINRDCYVDVNANKAVFDSLRNNPK 120
++LQHI +IR S VGAQ+K VID L +TR A+T E+IN CYVD++ NKAVFDSLR NPK
Sbjct: 57 KQLQHITNIRNSAVGAQMKIVIDLLFKTRLAYTAEQINEACYVDMHNNKAVFDSLRKNPK 116
Query: 121 VHYDGKRFSYKSKHDLKDKSQLLVLVRKFPEGIAVIDLKDSYPTVMEDLQALKAAGQI-W 179
VHYDG+RFSYK+ H++KDK QLL V K + I V DLKD+YP VMEDL++LK++G+I W
Sbjct: 117 VHYDGRRFSYKATHNIKDKKQLLSFVNKSDKVIDVSDLKDAYPNVMEDLKSLKSSGEIFW 176
Query: 180 LLSNFDSQEDIAYPNDPRVPIKADDDLKLLFRDIALPSDMLDIEKDLQKNGMKPATNTQK 239
LLSN DS+E Y N+ P K DD+LK LFRDI +PSDML++EK+L K G+KPATN +
Sbjct: 177 LLSNTDSKEGTVYRNNMEYP-KIDDELKALFRDI-IPSDMLEVEKELLKIGLKPATNIAE 234
Query: 240 RRAAAQIQGIXXX-XXXXXXXXXXXXRTKLTNAHLPELFQ 278
RRAA Q+ G+ RTKLTN+H+ ELFQ
Sbjct: 235 RRAAEQLHGVSNKPKDKKKKKKEITNRTKLTNSHMLELFQ 274
>DICTYBASE|DDB_G0287307 [details] [associations]
symbol:gtf2e2 "transcription initiation factor IIE2"
species:44689 "Dictyostelium discoideum" [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=IEA]
[GO:0005673 "transcription factor TFIIE complex" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR003166 InterPro:IPR016656
Pfam:PF02186 PIRSF:PIRSF016398 PROSITE:PS51351
dictyBase:DDB_G0287307 GO:GO:0006355 GO:GO:0003677
GenomeReviews:CM000154_GR EMBL:AAFI02000100 GO:GO:0006367
GO:GO:0005673 eggNOG:NOG284684 KO:K03137 RefSeq:XP_637225.1
HSSP:P29084 STRING:Q54KJ8 EnsemblProtists:DDB0266450 GeneID:8626056
KEGG:ddi:DDB_G0287307 OMA:TNTHIEN ProtClustDB:CLSZ2742986
Uniprot:Q54KJ8
Length = 276
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 59/235 (25%), Positives = 110/235 (46%)
Query: 10 FKKQQEKCQETLSNIAAKSGXXXXXXXXXXXXXXXXXXXXXXXXVKFSNDTERLQHINSI 69
FK+ Q K ETL++I S + S T +
Sbjct: 6 FKETQMKAIETLNSIKKPSSSTNSAFKYIPKISGGGGSSSANR--QSSIYTANTLRDKQV 63
Query: 70 RKSPVGAQIKRVIDRL--LETRQAFTPEEINRDCYVDVNANKAVFDSLRNNPKVHYDGK- 126
++ P + +++ L LE A T E ++ ++ ++ + + LRNN K+ G
Sbjct: 64 KEKPSNRIVYDIVNYLKTLEGIPADTKEIMHSTNHM-IDDKPEILELLRNNEKIIDHGND 122
Query: 127 RFSYKSKHDLKDKSQLLVLVRKFPEGIAVIDLKDSYPTVMEDLQALKAAGQIWLLSNFDS 186
RFS+K K +++ + +L L+ +P GI V +L +SY D++ LK QI+ + +S
Sbjct: 123 RFSFKPKFNVRTQRDILDLLPNYPGGILVSELAESYNNAESDVKKLKETKQIFAIKAAES 182
Query: 187 QEDIAYPNDPRVPIKADDDLKLLFRDIALPSDMLDIEKDLQKNGMKPATNTQKRR 241
DI +PND R+ + +L +++ I LP++ D+EK+++ G+ + + R
Sbjct: 183 ACDIIFPNDERLRVPLSSELVDMWKSIKLPNEA-DLEKEMKDAGLSVVESVESAR 236
>POMBASE|SPCC1672.08c [details] [associations]
symbol:tfa2 "transcription factor TFIIE beta subunit,
TFIIEB, Tfa2" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=TAS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005673 "transcription factor TFIIE complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IDA] InterPro:IPR003166 InterPro:IPR016656 Pfam:PF02186
PIRSF:PIRSF016398 PROSITE:PS51351 PomBase:SPCC1672.08c
GO:GO:0005730 GO:GO:0006355 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0003677 GO:GO:0051290 GO:GO:0006367 GO:GO:0000991
GO:GO:0005673 KO:K03137 EMBL:AB176673 EMBL:AB000475 PIR:T41052
RefSeq:NP_587879.1 IntAct:P79011 STRING:P79011
EnsemblFungi:SPCC1672.08c.1 GeneID:2539236 KEGG:spo:SPCC1672.08c
HOGENOM:HOG000216656 OMA:RCQSSLA OrthoDB:EOG4NGKWS NextBio:20800406
Uniprot:P79011
Length = 285
Score = 165 (63.1 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 44/173 (25%), Positives = 90/173 (52%)
Query: 76 AQIKRVIDRLLETRQAFTPEEINRDCYVDVNANKAVFDSLRNNPKVHYDGKR--FSYKSK 133
+Q+ ++ L E + T EEI Y+ + + L+ N +++YD + F++K
Sbjct: 81 SQLHYAVEYLKERNEPKTAEEIAS--YLSTPLTPMLLNLLKKNNRIYYDERNETFTFKPL 138
Query: 134 HDLKDKSQLLVLV--RKFPEGIAVIDLKDSYPTVMEDLQALKAAGQIWLL-SNFDSQEDI 190
H+++ + LL + +K G+++ +L+D +P V +L+ L+ G++ LL + D +
Sbjct: 139 HNIRSGAGLLAYLDSQKTHVGMSIKELRDGWPNVTVELEELEKQGEVLLLRTRKDGVPKM 198
Query: 191 AYPNDPRVPIKADDDLKLLFRDIALPSDMLDIEKDLQKNGMKPAT---NTQKR 240
+ ND D + + ++ +I +P LD+ +L K G+KP + +T KR
Sbjct: 199 VWRNDKSCDCHVDKEFQQVWHEIPIPPT-LDLASELGKYGLKPTSVDPSTVKR 250
>UNIPROTKB|Q5ZIE1 [details] [associations]
symbol:GTF2E2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005673 "transcription factor TFIIE complex"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR003166 InterPro:IPR016656 Pfam:PF02186
PIRSF:PIRSF016398 PROSITE:PS51351 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006367 GO:GO:0005673 CTD:2961
eggNOG:NOG284684 HOGENOM:HOG000008149 HOVERGEN:HBG009400 KO:K03137
OrthoDB:EOG470TJ9 OMA:LGDQIIF GeneTree:ENSGT00390000011749
EMBL:AADN02016141 EMBL:AADN02016142 EMBL:AJ720843 IPI:IPI00579019
RefSeq:XP_001233400.1 RefSeq:XP_003641238.1 UniGene:Gga.18462
UniGene:Gga.26205 SMR:Q5ZIE1 STRING:Q5ZIE1
Ensembl:ENSGALT00000016727 GeneID:771227 KEGG:gga:771227
InParanoid:Q5ZIE1 NextBio:20921431 Uniprot:Q5ZIE1
Length = 290
Score = 147 (56.8 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 49/161 (30%), Positives = 86/161 (53%)
Query: 93 TPEEI-NRDCYVDVNANKAVF---DSLRNNPKVHY-DGKRFSYKSKHDLKDKSQLLVLVR 147
T EEI + ++D+ + + ++L NNPK+ DGK F++K K++LKDK LL L+
Sbjct: 97 TLEEILDETQHLDIGLKQKQWLMNEALVNNPKIEVVDGK-FAFKPKYNLKDKKALLRLLD 155
Query: 148 KFPE-GIAVIDLKDSYPTVMEDLQALKAAG-QIWLLSNFDSQEDIAYPNDPRVPIKADDD 205
K + G+ I L++ + +A+KA G QI ++ D ++ + Y ND D++
Sbjct: 156 KHDQQGLGGIFLEEIEEGLPNAHKAIKALGDQILFVTRPDKRQ-LLYYNDKSCHFSVDEE 214
Query: 206 LKLLFRDIALPSDMLD---IEKDLQKNGMKPATNTQKRRAA 243
+ L+R I P D +D +E+ L++ G+ R+ A
Sbjct: 215 FRKLWRSI--PMDSIDEDKVEEYLKRQGISSMREAGPRKIA 253
>UNIPROTKB|E2R5J2 [details] [associations]
symbol:GTF2E2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0005673 "transcription factor TFIIE complex"
evidence=IEA] InterPro:IPR003166 InterPro:IPR016656 Pfam:PF02186
PIRSF:PIRSF016398 PROSITE:PS51351 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006367 GO:GO:0005673 KO:K03137
OMA:LGDQIIF GeneTree:ENSGT00390000011749 EMBL:AAEX03010423
RefSeq:XP_003639611.1 ProteinModelPortal:E2R5J2
Ensembl:ENSCAFT00000010484 GeneID:100855770 KEGG:cfa:100855770
NextBio:20851406 Uniprot:E2R5J2
Length = 291
Score = 146 (56.5 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 45/158 (28%), Positives = 83/158 (52%)
Query: 93 TPEEI-NRDCYVDVNANKAVF---DSLRNNPKVHY-DGKRFSYKSKHDLKDKSQLLVLVR 147
T EEI + ++D+ + + ++L NNPK+ DGK +++K K++LKDK LL L+
Sbjct: 98 TLEEILDETQHLDIGLKQKQWLMTEALVNNPKIEVIDGK-YAFKPKYNLKDKKALLRLLD 156
Query: 148 KFPE-GIAVIDLKDSYPTVMEDLQALKAAGQIWLLSNFDSQEDIAYPNDPRVPIKADDDL 206
K + G+ I L+D + +A+KA G + N ++ I + ND D++
Sbjct: 157 KHDQRGLGGILLEDIEEGLPNSQKAVKALGDQIIFVNRPDKKKILFFNDKSCQFSVDEEF 216
Query: 207 KLLFRDIALPS-DMLDIEKDLQKNGMKPATNTQKRRAA 243
+ L+R + + S D IE+ L++ G+ + ++ A
Sbjct: 217 QKLWRSVTVDSMDEEKIEEYLKRQGISSMQESGPKKVA 254
>UNIPROTKB|F1MUX7 [details] [associations]
symbol:GTF2E2 "General transcription factor IIE subunit 2"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005673 "transcription factor TFIIE
complex" evidence=IEA] InterPro:IPR003166 InterPro:IPR016656
Pfam:PF02186 PIRSF:PIRSF016398 PROSITE:PS51351 GO:GO:0005737
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367 GO:GO:0005673
IPI:IPI00694434 UniGene:Bt.20425 OMA:LGDQIIF
GeneTree:ENSGT00390000011749 EMBL:DAAA02060454 EMBL:DAAA02060453
Ensembl:ENSBTAT00000016863 Uniprot:F1MUX7
Length = 289
Score = 145 (56.1 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 45/158 (28%), Positives = 84/158 (53%)
Query: 93 TPEEI-NRDCYVDVNANKAVF---DSLRNNPKVHY-DGKRFSYKSKHDLKDKSQLLVLVR 147
T EEI + ++D+ + + ++L NNPK+ DGK +++K K++LKDK LL L+
Sbjct: 96 TLEEILDETQHLDIGLKQKQWLMSEALVNNPKIEVVDGK-YAFKPKYNLKDKKALLRLLD 154
Query: 148 KFPE-GIAVIDLKDSYPTVMEDLQALKAAGQIWLLSNFDSQEDIAYPNDPRVPIKADDDL 206
+ + G+ I L+D + +A+KA G L N ++ I + ND D++
Sbjct: 155 QHDQRGLGGILLEDIEEGLPNSQKAVKALGDQILFVNRPDKKKILFFNDKSCQFSVDEEF 214
Query: 207 KLLFRDIALPS-DMLDIEKDLQKNGMKPATNTQKRRAA 243
+ L+R + + S D IE+ L++ G+ ++ ++ A
Sbjct: 215 QKLWRSVTVDSMDEEKIEEYLKRQGISSMQDSGPKKVA 252
>UNIPROTKB|Q2KJF9 [details] [associations]
symbol:GTF2E2 "General transcription factor IIE subunit 2"
species:9913 "Bos taurus" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005673 "transcription
factor TFIIE complex" evidence=IEA] InterPro:IPR003166
InterPro:IPR016656 Pfam:PF02186 PIRSF:PIRSF016398 PROSITE:PS51351
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006367 GO:GO:0005673 EMBL:BC105362 IPI:IPI00694434
RefSeq:NP_001039530.1 UniGene:Bt.20425 ProteinModelPortal:Q2KJF9
SMR:Q2KJF9 STRING:Q2KJF9 PRIDE:Q2KJF9 GeneID:510921 KEGG:bta:510921
CTD:2961 eggNOG:NOG284684 HOGENOM:HOG000008149 HOVERGEN:HBG009400
InParanoid:Q2KJF9 KO:K03137 OrthoDB:EOG470TJ9 NextBio:20869682
Uniprot:Q2KJF9
Length = 289
Score = 145 (56.1 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 45/158 (28%), Positives = 84/158 (53%)
Query: 93 TPEEI-NRDCYVDVNANKAVF---DSLRNNPKVHY-DGKRFSYKSKHDLKDKSQLLVLVR 147
T EEI + ++D+ + + ++L NNPK+ DGK +++K K++LKDK LL L+
Sbjct: 96 TLEEILDETQHLDIGLKQKQWLMSEALVNNPKIEVVDGK-YAFKPKYNLKDKKALLRLLD 154
Query: 148 KFPE-GIAVIDLKDSYPTVMEDLQALKAAGQIWLLSNFDSQEDIAYPNDPRVPIKADDDL 206
+ + G+ I L+D + +A+KA G L N ++ I + ND D++
Sbjct: 155 QHDQRGLGGILLEDIEEGLPNSQKAVKALGDQILFVNRPDKKKILFFNDKSCQFSVDEEF 214
Query: 207 KLLFRDIALPS-DMLDIEKDLQKNGMKPATNTQKRRAA 243
+ L+R + + S D IE+ L++ G+ ++ ++ A
Sbjct: 215 QKLWRSVTVDSMDEEKIEEYLKRQGISSMQDSGPKKVA 252
>RGD|1310134 [details] [associations]
symbol:Gtf2e2 "general transcription factor IIE, polypeptide 2,
beta" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005673 "transcription factor TFIIE complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR003166 InterPro:IPR016656 Pfam:PF02186
PIRSF:PIRSF016398 PROSITE:PS51351 RGD:1310134 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006367 GO:GO:0005673 IPI:IPI00205391
Ensembl:ENSRNOT00000019989 UCSC:RGD:1310134 ArrayExpress:D4A5U4
Uniprot:D4A5U4
Length = 279
Score = 143 (55.4 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 47/160 (29%), Positives = 86/160 (53%)
Query: 93 TPEEI-NRDCYVDVNANKAVF---DSLRNNPKVHY-DGKRFSYKSKHDLKDKSQLLVLVR 147
T EEI + ++D+ + + ++L NNPK+ DGK +++K K++LKDK LL L+
Sbjct: 98 TLEEILDETQHLDIGLKQKQWLMTEALVNNPKIEVVDGK-YAFKPKYNLKDKKALLRLLD 156
Query: 148 KFPE-GIAVIDLKDSYPTVMEDLQALKAAG-QIWLLSNFDSQEDIAYPNDPRVPIKADDD 205
+ G+ I L+D + +A+KA G QI +S D ++ I + ND D++
Sbjct: 157 NHDQRGLGGILLEDIEEGLPNSQKAVKALGDQILFVSRPDKKK-ILFFNDKSCQFSVDEE 215
Query: 206 LKLLFRDIALPS-DMLDIEKDLQKNGMKPATNTQKRRAAA 244
+ L+R + + S D IE+ L++ G+ + ++ A+
Sbjct: 216 FQKLWRSVTVDSMDEEKIEEYLKRQGISSMQESGPKKVAS 255
>MGI|MGI:1915403 [details] [associations]
symbol:Gtf2e2 "general transcription factor II E,
polypeptide 2 (beta subunit)" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005673 "transcription factor TFIIE complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR003166
InterPro:IPR016656 Pfam:PF02186 PIRSF:PIRSF016398 PROSITE:PS51351
MGI:MGI:1915403 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367 GO:GO:0005673
CTD:2961 eggNOG:NOG284684 HOGENOM:HOG000008149 HOVERGEN:HBG009400
KO:K03137 OrthoDB:EOG470TJ9 OMA:LGDQIIF EMBL:AK007492 EMBL:AK088342
EMBL:AK150415 EMBL:AK153370 EMBL:AK158783 EMBL:BC020016
IPI:IPI00331112 RefSeq:NP_001161393.1 RefSeq:NP_001161394.1
RefSeq:NP_080860.3 UniGene:Mm.286104 UniGene:Mm.490339
ProteinModelPortal:Q9D902 SMR:Q9D902 DIP:DIP-49546N IntAct:Q9D902
MINT:MINT-218577 STRING:Q9D902 PhosphoSite:Q9D902 PaxDb:Q9D902
PRIDE:Q9D902 Ensembl:ENSMUST00000167264 Ensembl:ENSMUST00000170705
Ensembl:ENSMUST00000171010 GeneID:68153 KEGG:mmu:68153
GeneTree:ENSGT00390000011749 InParanoid:Q9D902 NextBio:326546
Bgee:Q9D902 Genevestigator:Q9D902 GermOnline:ENSMUSG00000031585
Uniprot:Q9D902
Length = 292
Score = 143 (55.4 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 47/160 (29%), Positives = 86/160 (53%)
Query: 93 TPEEI-NRDCYVDVNANKAVF---DSLRNNPKVHY-DGKRFSYKSKHDLKDKSQLLVLVR 147
T EEI + ++D+ + + ++L NNPK+ DGK +++K K++LKDK LL L+
Sbjct: 99 TLEEILDETQHLDIGLKQKQWLMTEALVNNPKIEVVDGK-YAFKPKYNLKDKKALLRLLD 157
Query: 148 KFPE-GIAVIDLKDSYPTVMEDLQALKAAG-QIWLLSNFDSQEDIAYPNDPRVPIKADDD 205
+ G+ I L+D + +A+KA G QI +S D ++ I + ND D++
Sbjct: 158 NHDQRGLGGILLEDIEEGLPNSQKAVKALGDQILFVSRPDKKK-ILFFNDKSCQFSVDEE 216
Query: 206 LKLLFRDIALPS-DMLDIEKDLQKNGMKPATNTQKRRAAA 244
+ L+R + + S D IE+ L++ G+ + ++ A+
Sbjct: 217 FQKLWRSVTVDSMDEEKIEEYLKRQGISSMQESGPKKVAS 256
>UNIPROTKB|F1RX65 [details] [associations]
symbol:GTF2E2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0005673 "transcription factor TFIIE complex"
evidence=IEA] InterPro:IPR003166 Pfam:PF02186 PROSITE:PS51351
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367
GO:GO:0005673 OMA:LGDQIIF GeneTree:ENSGT00390000011749
EMBL:FP236445 EMBL:CU855604 EMBL:FP236189
Ensembl:ENSSSCT00000017253 Uniprot:F1RX65
Length = 209
Score = 137 (53.3 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 46/160 (28%), Positives = 83/160 (51%)
Query: 93 TPEEI-NRDCYVDVNANKAVF---DSLRNNPKVHY-DGKRFSYKSKHDLKDKSQLLVLVR 147
T EEI + ++D+ + + ++L NNPK+ DGK +++K K++LKDK LL L+
Sbjct: 14 TLEEILDETQHLDIGLKQKQWLMTEALVNNPKIEVIDGK-YAFKPKYNLKDKKALLRLLD 72
Query: 148 KFPE-GIAVIDLKDSYPTVMEDLQALKAAGQIWLLSNFDSQEDIAYPNDPRVPIKADD-- 204
K + G+ I L+D + +A+KA G L N ++ I + ND D+
Sbjct: 73 KHDQRGLGGILLEDIEEGLPNSQKAVKALGDQILFVNRPDKKKILFFNDKSCQFSVDEGT 132
Query: 205 DLKLLFRDIALPS-DMLDIEKDLQKNGMKPATNTQKRRAA 243
+ + L+R + + S D IE+ L++ G+ + ++ A
Sbjct: 133 EFQKLWRSVTVDSMDEEKIEEYLKRQGISSMQESGPKKVA 172
>UNIPROTKB|P29084 [details] [associations]
symbol:GTF2E2 "Transcription initiation factor IIE subunit
beta" species:9606 "Homo sapiens" [GO:0005673 "transcription factor
TFIIE complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0006368 "transcription elongation from
RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR003166
InterPro:IPR016656 Pfam:PF02186 PIRSF:PIRSF016398 PROSITE:PS51351
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0005654 GO:GO:0016032
GO:GO:0006355 EMBL:CH471080 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006368 GO:GO:0006367 Reactome:REACT_1788
GO:GO:0005673 CTD:2961 HOGENOM:HOG000008149 HOVERGEN:HBG009400
KO:K03137 OrthoDB:EOG470TJ9 EMBL:S67861 EMBL:X63469 EMBL:AF292062
EMBL:AF292056 EMBL:AF292057 EMBL:AF292058 EMBL:AF292059
EMBL:AF292060 EMBL:AF292061 EMBL:BC030572 IPI:IPI00019981
PIR:S29292 RefSeq:NP_002086.1 UniGene:Hs.77100 PDB:1D8J PDB:1D8K
PDBsum:1D8J PDBsum:1D8K ProteinModelPortal:P29084 SMR:P29084
DIP:DIP-716N IntAct:P29084 MINT:MINT-1894071 STRING:P29084
PhosphoSite:P29084 DMDM:135232 PaxDb:P29084 PeptideAtlas:P29084
PRIDE:P29084 DNASU:2961 Ensembl:ENST00000355904 GeneID:2961
KEGG:hsa:2961 UCSC:uc003xig.3 GeneCards:GC08M030429 HGNC:HGNC:4651
HPA:CAB009603 HPA:HPA025065 MIM:189964 neXtProt:NX_P29084
PharmGKB:PA29037 eggNOG:COG5174 InParanoid:P29084 OMA:LGDQIIF
PhylomeDB:P29084 EvolutionaryTrace:P29084 GenomeRNAi:2961
NextBio:11738 ArrayExpress:P29084 Bgee:P29084 CleanEx:HS_GTF2E2
Genevestigator:P29084 GermOnline:ENSG00000197265 Uniprot:P29084
Length = 291
Score = 139 (54.0 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 38/134 (28%), Positives = 72/134 (53%)
Query: 113 DSLRNNPKVHY-DGKRFSYKSKHDLKDKSQLLVLVRKFPE-GIAVIDLKDSYPTVMEDLQ 170
++L NNPK+ DGK +++K K++++DK LL L+ + + G+ I L+D + +
Sbjct: 122 EALVNNPKIEVIDGK-YAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEALPNSQK 180
Query: 171 ALKAAGQIWLLSNFDSQEDIAYPNDPRVPIKADDDLKLLFRDIALPS-DMLDIEKDLQKN 229
A+KA G L N ++ I + ND D++ + L+R + + S D IE+ L++
Sbjct: 181 AVKALGDQILFVNRPDKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEYLKRQ 240
Query: 230 GMKPATNTQKRRAA 243
G+ + ++ A
Sbjct: 241 GISSMQESGPKKVA 254
>ASPGD|ASPL0000029003 [details] [associations]
symbol:AN5498 species:162425 "Emericella nidulans"
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005673
"transcription factor TFIIE complex" evidence=IEA]
InterPro:IPR003166 InterPro:IPR016656 Pfam:PF02186
PIRSF:PIRSF016398 PROSITE:PS51351 EMBL:BN001305 GO:GO:0003743
GO:GO:0006367 EMBL:AACD01000094 GO:GO:0005673 KO:K03137
eggNOG:COG5174 HOGENOM:HOG000216656 OrthoDB:EOG4NGKWS OMA:KDGWPQC
RefSeq:XP_663102.1 STRING:Q5B1T2 EnsemblFungi:CADANIAT00003589
GeneID:2871788 KEGG:ani:AN5498.2 Uniprot:Q5B1T2
Length = 293
Score = 136 (52.9 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 37/140 (26%), Positives = 75/140 (53%)
Query: 109 KAVFDSLRNNPKVHYD-----GK-RFSYKSKHDLKDKSQLLVLVRKFPEGI--AVIDLKD 160
+A+ L+ + KV YD G+ FS++ H+++ QLL ++ G+ +V +L++
Sbjct: 117 QALRSILQMHEKVQYDPSGANGEGTFSFRPPHNIRTAEQLLQKLQSQSTGVGMSVRELRE 176
Query: 161 SYPTVMEDLQALKAAGQIWLLSNF-DSQEDIAYPNDPRVPIKADDDLKLLFRDIALPSDM 219
+P V + + L+ G++ + N D + + NDP + DD+ K ++ I +P
Sbjct: 177 GWPNVEDTINKLEKEGKLLVTRNKKDDHAKMVWANDPSLIQHFDDEFKQIWEKIKIPEQQ 236
Query: 220 LDIEKDLQKNGMKPATNTQK 239
+ ++++L+K G+ P TN K
Sbjct: 237 V-VKEELEKAGITP-TNKNK 254
>ZFIN|ZDB-GENE-030131-6794 [details] [associations]
symbol:gtf2e2 "general transcription factor IIE,
polypeptide 2, beta" species:7955 "Danio rerio" [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0005673 "transcription factor TFIIE complex"
evidence=IEA] InterPro:IPR003166 InterPro:IPR016656 Pfam:PF02186
PIRSF:PIRSF016398 PROSITE:PS51351 ZFIN:ZDB-GENE-030131-6794
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367 GO:GO:0005673
CTD:2961 HOGENOM:HOG000008149 HOVERGEN:HBG009400 KO:K03137
OMA:LGDQIIF GeneTree:ENSGT00390000011749 EMBL:BX469934
EMBL:BX908795 EMBL:BC067173 IPI:IPI00502827 RefSeq:NP_997896.1
UniGene:Dr.51 SMR:Q6NXA3 STRING:Q6NXA3 Ensembl:ENSDART00000016488
GeneID:334854 KEGG:dre:334854 InParanoid:Q6NXA3 NextBio:20810573
Uniprot:Q6NXA3
Length = 291
Score = 133 (51.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 38/132 (28%), Positives = 70/132 (53%)
Query: 113 DSLRNNPKVHYDGKRFSYKSKHDLKDKSQLLVLVRKFPE-GIAVIDLKDSYPTVMEDLQA 171
++L +NPK+ ++++K K+ LKDK LL L+ K + G+ + L D + +A
Sbjct: 121 EALASNPKIDVREGKYAFKPKYHLKDKKALLRLLDKHDQLGLGGVLLDDVEEGLPNAAKA 180
Query: 172 LKAAG-QIWLLSNFDSQEDIAYPNDPRVPIKADDDLKLLFRDIALPS-DMLDIEKDLQKN 229
+KA G QI ++ D ++ + Y ND D++ + L+R + + S D IE+ L+K
Sbjct: 181 IKALGDQIIFVTRPDKKKILFY-NDKHCQFVVDEEFQKLWRSVPVDSIDEEKIEEYLKKQ 239
Query: 230 GMKPATNTQKRR 241
G+ T ++
Sbjct: 240 GISSMQETGPKK 251
>WB|WBGene00010054 [details] [associations]
symbol:F54D5.11.2 species:6239 "Caenorhabditis elegans"
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA;IDA] [GO:0005673 "transcription factor TFIIE
complex" evidence=IEA;IPI] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0000988 "protein binding transcription factor
activity" evidence=IDA] InterPro:IPR003166 InterPro:IPR016656
Pfam:PF02186 PIRSF:PIRSF016398 PROSITE:PS51351 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006367 GO:GO:0000988 EMBL:Z66513
GO:GO:0005673 KO:K03137 HSSP:P29084 OMA:LGDQIIF
GeneTree:ENSGT00390000011749 EMBL:Y08815 PIR:T22650
RefSeq:NP_496466.1 ProteinModelPortal:G5EG47 SMR:G5EG47
EnsemblMetazoa:F54D5.11.1 EnsemblMetazoa:F54D5.11.2 GeneID:174765
KEGG:cel:CELE_F54D5.11 CTD:174765 WormBase:F54D5.11 NextBio:885408
Uniprot:G5EG47
Length = 289
Score = 122 (48.0 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 49/205 (23%), Positives = 98/205 (47%)
Query: 56 FSNDTERLQHI-NSIRKSPVGAQIKRVIDRLLETRQ-AFTPEEINRDCYV-DVNANKAVF 112
F+N + N+ S + + + R L +Q T +EI + + D++ F
Sbjct: 61 FNNSVSNANALSNATNFSTMAKIVDYMKKRHLNNQQWPLTLQEILDELQIFDLSKRSLAF 120
Query: 113 --DSLRNNPKVHYDGKRFSYKSKHDLKDKSQLLVLVRKFPE----GIAVIDLKDSYPTVM 166
++L NNP++ + ++F+++ + +K K+ L+ + RK + GI V DL +
Sbjct: 121 LQEALPNNPRLIMESEKFAFRPPYKIKGKTSLVAVARKHYQDGKGGILVSDLAECVANYD 180
Query: 167 EDLQALKAAGQIWLLSNFDSQED-IAYPNDPRVPI-KADDDLKLLFRDIALPS-DMLDIE 223
LQ + + I + + + ++D + + ND + +DD K L+R +++ D IE
Sbjct: 181 ALLQQVSSE-VIVVPTQVNKKKDRVVFYNDKEFTFPELEDDFKALWRHVSVDHLDEKKIE 239
Query: 224 KDLQKNGMKPATN-TQKRRAAAQIQ 247
+ LQK G+ + T K R A ++
Sbjct: 240 EYLQKKGLDAMKDLTPKVRMQAPLK 264
>UNIPROTKB|G5EG47 [details] [associations]
symbol:TFIIE-beta "TFIIE-beta protein" species:6239
"Caenorhabditis elegans" [GO:2001141 "regulation of RNA
biosynthetic process" evidence=IDA] InterPro:IPR003166
InterPro:IPR016656 Pfam:PF02186 PIRSF:PIRSF016398 PROSITE:PS51351
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0010171 GO:GO:0040011 GO:GO:0000003
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367 GO:GO:0000988
EMBL:Z66513 GO:GO:0005673 KO:K03137 HSSP:P29084 OMA:LGDQIIF
GeneTree:ENSGT00390000011749 EMBL:Y08815 PIR:T22650
RefSeq:NP_496466.1 ProteinModelPortal:G5EG47 SMR:G5EG47
EnsemblMetazoa:F54D5.11.1 EnsemblMetazoa:F54D5.11.2 GeneID:174765
KEGG:cel:CELE_F54D5.11 CTD:174765 WormBase:F54D5.11 NextBio:885408
Uniprot:G5EG47
Length = 289
Score = 122 (48.0 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 49/205 (23%), Positives = 98/205 (47%)
Query: 56 FSNDTERLQHI-NSIRKSPVGAQIKRVIDRLLETRQ-AFTPEEINRDCYV-DVNANKAVF 112
F+N + N+ S + + + R L +Q T +EI + + D++ F
Sbjct: 61 FNNSVSNANALSNATNFSTMAKIVDYMKKRHLNNQQWPLTLQEILDELQIFDLSKRSLAF 120
Query: 113 --DSLRNNPKVHYDGKRFSYKSKHDLKDKSQLLVLVRKFPE----GIAVIDLKDSYPTVM 166
++L NNP++ + ++F+++ + +K K+ L+ + RK + GI V DL +
Sbjct: 121 LQEALPNNPRLIMESEKFAFRPPYKIKGKTSLVAVARKHYQDGKGGILVSDLAECVANYD 180
Query: 167 EDLQALKAAGQIWLLSNFDSQED-IAYPNDPRVPI-KADDDLKLLFRDIALPS-DMLDIE 223
LQ + + I + + + ++D + + ND + +DD K L+R +++ D IE
Sbjct: 181 ALLQQVSSE-VIVVPTQVNKKKDRVVFYNDKEFTFPELEDDFKALWRHVSVDHLDEKKIE 239
Query: 224 KDLQKNGMKPATN-TQKRRAAAQIQ 247
+ LQK G+ + T K R A ++
Sbjct: 240 EYLQKKGLDAMKDLTPKVRMQAPLK 264
>SGD|S000001770 [details] [associations]
symbol:TFA2 "TFIIE small subunit" species:4932 "Saccharomyces
cerevisiae" [GO:0001097 "TFIIH-class transcription factor binding"
evidence=IDA] [GO:0005673 "transcription factor TFIIE complex"
evidence=IEA;IDA;IPI] [GO:0000993 "RNA polymerase II core binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IGI;IDA] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003166 InterPro:IPR016656 Pfam:PF02186
PIRSF:PIRSF016398 PROSITE:PS51351 SGD:S000001770 GO:GO:0006355
GO:GO:0003677 EMBL:BK006944 GO:GO:0006366 GO:GO:0006367
GO:GO:0005673 KO:K03137 eggNOG:COG5174 GeneTree:ENSGT00390000011749
HOGENOM:HOG000216656 OrthoDB:EOG4NGKWS EMBL:U12824 EMBL:Z28287
PIR:S38138 RefSeq:NP_012988.1 ProteinModelPortal:P36145
DIP:DIP-1701N IntAct:P36145 MINT:MINT-411389 STRING:P36145
PaxDb:P36145 PeptideAtlas:P36145 EnsemblFungi:YKR062W GeneID:853936
KEGG:sce:YKR062W OMA:KDGWPQC NextBio:975315 Genevestigator:P36145
GermOnline:YKR062W Uniprot:P36145
Length = 328
Score = 121 (47.7 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 36/139 (25%), Positives = 69/139 (49%)
Query: 102 YVDVNANKAVFDSLRNNPKVHYDGKR--FSYKSKHDLKDKSQLLVLVRKFP--EGIAVID 157
Y+ + + V + L+ ++ +D K+ F Y S +D+ S+LL L+R +GI+ D
Sbjct: 150 YLSMKKDDKVIELLKKLDRIEFDPKKGTFKYLSTYDVHSPSELLKLLRSQVTFKGISCKD 209
Query: 158 LKDSYPTVMEDLQALKAAGQIWLL-SNFDSQEDIAYPNDPRVPIKADDDLKLLFRDIALP 216
LKD +P E + L+ +I +L + D + N D++ ++ ++ LP
Sbjct: 210 LKDGWPQCDETINQLEEDSKILVLRTKKDKTPRYVWYNSGGNLKCIDEEFVKMWENVQLP 269
Query: 217 SDMLDIEKDLQKNGMKPAT 235
++ + LQ G+KPA+
Sbjct: 270 Q-FAELPRKLQDLGLKPAS 287
>FB|FBgn0015829 [details] [associations]
symbol:TfIIEbeta "Transcription factor IIEbeta" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005673 "transcription factor TFIIE complex" evidence=ISS;IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR003166
InterPro:IPR016656 Pfam:PF02186 PIRSF:PIRSF016398 PROSITE:PS51351
EMBL:AE014296 GO:GO:0022008 GO:GO:0045944 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006367 GO:GO:0005673 eggNOG:NOG284684
KO:K03137 HSSP:P29084 OMA:LGDQIIF GeneTree:ENSGT00390000011749
UniGene:Dm.2665 GeneID:38527 KEGG:dme:Dmel_CG1276 CTD:38527
FlyBase:FBgn0015829 GenomeRNAi:38527 NextBio:809104 EMBL:U72893
EMBL:BT022197 RefSeq:NP_523923.1 SMR:O96881 IntAct:O96881
MINT:MINT-928529 STRING:O96881 EnsemblMetazoa:FBtr0073234
UCSC:CG1276-RA HOGENOM:HOG000248128 InParanoid:O96881
OrthoDB:EOG45MKN7 Uniprot:O96881
Length = 292
Score = 114 (45.2 bits), Expect = 0.00022, P = 0.00022
Identities = 34/127 (26%), Positives = 69/127 (54%)
Query: 113 DSLRNNPKVHYD--GKRFSYKSKHDLKDKSQLLVLVRKFP----EGIAVIDLKDSYPTVM 166
++L NNPKV G +FS+K + +KD L+ L+++ GI + D+++S P
Sbjct: 115 EALHNNPKVEASPCGTKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILLDDVQESLPHCE 174
Query: 167 EDLQALKAAGQIWLLSNFDSQEDIAYPNDPRVPIKADDDLKLLFRDIALPS-DMLDIEKD 225
+ L+ ++A ++++ D ++ + Y ND DD+ + L+R + + D I++
Sbjct: 175 KVLKN-RSAEILFVVRPIDKKKILFY-NDRTANFSVDDEFQKLWRSATVDAMDDAKIDEY 232
Query: 226 LQKNGMK 232
L+K G++
Sbjct: 233 LEKQGIR 239
>UNIPROTKB|G4N6W7 [details] [associations]
symbol:MGG_06509 "Transcription initiation factor IIE
subunit beta" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003166 InterPro:IPR016656
PIRSF:PIRSF016398 PROSITE:PS51351 GO:GO:0003743 GO:GO:0043581
GO:GO:0006367 EMBL:CM001234 GO:GO:0005673 KO:K03137
RefSeq:XP_003717050.1 EnsemblFungi:MGG_06509T0 GeneID:2684664
KEGG:mgr:MGG_06509 Uniprot:G4N6W7
Length = 310
Score = 109 (43.4 bits), Expect = 0.00097, P = 0.00097
Identities = 30/112 (26%), Positives = 60/112 (53%)
Query: 136 LKDKSQLLVLV--RKFPEGIAVIDLKDSYPTVMEDLQALKAAGQIWLL-SNFDSQEDIAY 192
+KD++ LL + RK +G++V DLKD +P+ E + L+ A ++ ++ + D +
Sbjct: 165 VKDETSLLRYLSERKTAQGVSVKDLKDGWPSCDETITKLEKAHKLLVVRTKKDGVARTVW 224
Query: 193 PNDPRVPIKADDDLKLLFRDIALPSDMLDIEKDLQKNGMKPATNTQKRRAAA 244
+DP + D + KL++ + +P + DI + L G KP ++ + + A
Sbjct: 225 IDDPSLHHDVDAEFKLMWHRVEVPP-LEDIVRKLAAAGQKPTSDDPQLKVHA 275
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.372 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 283 244 0.00098 113 3 11 22 0.46 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 594 (63 KB)
Total size of DFA: 170 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.65u 0.14s 21.79t Elapsed: 00:00:01
Total cpu time: 21.65u 0.14s 21.79t Elapsed: 00:00:01
Start: Thu May 9 23:23:05 2013 End: Thu May 9 23:23:06 2013