BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023375
(283 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357490831|ref|XP_003615703.1| hypothetical protein MTR_5g071250 [Medicago truncatula]
gi|355517038|gb|AES98661.1| hypothetical protein MTR_5g071250 [Medicago truncatula]
Length = 566
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/278 (85%), Positives = 262/278 (94%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ GISEEEK RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY+HVKDYIHVTLIEANEI
Sbjct: 221 VPGISEEEKKRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYAHVKDYIHVTLIEANEI 280
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFDDRLRHYAT QL+KSGVRLVRGIVKDV +K+ILNDGTEVPYGLLVWSTGVGPS
Sbjct: 281 LSSFDDRLRHYATNQLTKSGVRLVRGIVKDVQEKKIILNDGTEVPYGLLVWSTGVGPSPF 340
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
+ SLDLPKSPGGRIGIDEWLRVPSVQD+F++GDCSG++ESTGK LPALAQVAERQGKYL
Sbjct: 341 IHSLDLPKSPGGRIGIDEWLRVPSVQDIFSIGDCSGFVESTGKPTLPALAQVAERQGKYL 400
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
+LLN++G+A GGRANS KD++LG+ FVY+HLGSMAT+G YKALVDLRQNK++KGLSLAG
Sbjct: 401 AALLNKVGEANGGRANSMKDIDLGNQFVYKHLGSMATVGSYKALVDLRQNKDAKGLSLAG 460
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
FLSW VWRSAYLTRV+SWRNRFYVA+NWATTFVFGRDI
Sbjct: 461 FLSWFVWRSAYLTRVISWRNRFYVAINWATTFVFGRDI 498
>gi|449450824|ref|XP_004143162.1| PREDICTED: alternative NAD(P)H dehydrogenase 1, mitochondrial-like
[Cucumis sativus]
gi|449523139|ref|XP_004168582.1| PREDICTED: alternative NAD(P)H dehydrogenase 1, mitochondrial-like
[Cucumis sativus]
Length = 505
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 239/281 (85%), Positives = 263/281 (93%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ GIS EEK RLLHCVVVGGGPTGVEFSGELSDFI++DV QRYSHVKDYI VTLIEANEI
Sbjct: 225 VPGISVEEKRRLLHCVVVGGGPTGVEFSGELSDFIIKDVTQRYSHVKDYIQVTLIEANEI 284
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFDDRLRHYAT QL+KSGV+LVRGIVKDV Q +ILNDG+EVPYGLLVWSTGVGPS
Sbjct: 285 LSSFDDRLRHYATKQLTKSGVQLVRGIVKDVKPQSIILNDGSEVPYGLLVWSTGVGPSPF 344
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
V SL++PKSPGGRIGIDEWLRVP+V+DVFA+GDCSG+LESTGK VLPALAQVAERQGKYL
Sbjct: 345 VNSLEVPKSPGGRIGIDEWLRVPAVEDVFAIGDCSGFLESTGKQVLPALAQVAERQGKYL 404
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
+LLN+IGK GGGRA S K++ELGDPFVY+HLGSMATIGRYKALVDLRQ+KE+KG+S+AG
Sbjct: 405 AALLNKIGKEGGGRAGSGKNLELGDPFVYKHLGSMATIGRYKALVDLRQSKEAKGISMAG 464
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
FLSW VWRSAYLTRV+SWRNRFYVAVNWATTF+FGRDISRI
Sbjct: 465 FLSWFVWRSAYLTRVISWRNRFYVAVNWATTFIFGRDISRI 505
>gi|356500874|ref|XP_003519255.1| PREDICTED: probable NADH dehydrogenase-like [Glycine max]
Length = 485
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 235/281 (83%), Positives = 263/281 (93%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ GI EEEK RLLHCVVVGGGPTGVEFSGELSDFI+RDVRQRY+HVKDYIHVTLIEANEI
Sbjct: 205 VPGIEEEEKQRLLHCVVVGGGPTGVEFSGELSDFIVRDVRQRYAHVKDYIHVTLIEANEI 264
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFD RLR YAT QL+KSGVRLVRGIVKDV+ +K+ILNDGTEVPYGLLVWSTGVGPS +
Sbjct: 265 LSSFDVRLRQYATNQLTKSGVRLVRGIVKDVEEKKIILNDGTEVPYGLLVWSTGVGPSAI 324
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
++SLDLPK+PGGRIGIDEWLRVP+V+D+F++GDCSG++ESTGKT LPALAQVAERQGKYL
Sbjct: 325 IRSLDLPKAPGGRIGIDEWLRVPTVEDIFSIGDCSGFVESTGKTPLPALAQVAERQGKYL 384
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
LLN+IGKA GGRANSAKD++ GD FVY+H+GSMA+IG YKALVDLRQNKE KGLSLAG
Sbjct: 385 GILLNKIGKANGGRANSAKDVDFGDQFVYKHMGSMASIGSYKALVDLRQNKEGKGLSLAG 444
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
F+SW +WRSAYLTRV+SWRNRFYVA+NWATT VFGRDISRI
Sbjct: 445 FVSWFIWRSAYLTRVISWRNRFYVAINWATTLVFGRDISRI 485
>gi|118488127|gb|ABK95883.1| unknown [Populus trichocarpa]
Length = 488
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/281 (85%), Positives = 259/281 (92%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ G+SEEEKSRLLHCVVVGGGPTGVEFSGELSDFI++DVRQ YSHVKDYIHVTLIEANEI
Sbjct: 208 MPGLSEEEKSRLLHCVVVGGGPTGVEFSGELSDFILKDVRQTYSHVKDYIHVTLIEANEI 267
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFDD LR YAT QL+KSGV LVRGIVKDV QKLIL DGTEVPYGLLVWSTGVGPS+
Sbjct: 268 LSSFDDSLRRYATKQLTKSGVHLVRGIVKDVKPQKLILTDGTEVPYGLLVWSTGVGPSSF 327
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
VKSL+L KSPGGRIGIDEWLRVPSV DVFA+GDCSG+LESTGK VLPALAQVAERQGKYL
Sbjct: 328 VKSLELSKSPGGRIGIDEWLRVPSVPDVFAIGDCSGFLESTGKPVLPALAQVAERQGKYL 387
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
LLN+IGK GGGR S +++ELGDPFVYRHLGSMATIGRYKALVDLRQ+KE+KGL+L G
Sbjct: 388 AKLLNKIGKDGGGRRTSGEEVELGDPFVYRHLGSMATIGRYKALVDLRQSKEAKGLALKG 447
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
F SW +WRSAYLTRV+SWRNRFYVA+NWATTFVFGRDISRI
Sbjct: 448 FASWFIWRSAYLTRVISWRNRFYVAINWATTFVFGRDISRI 488
>gi|225434562|ref|XP_002277505.1| PREDICTED: probable NADH dehydrogenase [Vitis vinifera]
gi|297745883|emb|CBI15939.3| unnamed protein product [Vitis vinifera]
Length = 499
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 237/281 (84%), Positives = 259/281 (92%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ GISE EK RLLHCVVVGGGPTGVEFSGELSDFI RDV QRY+HVK+YIHVTLIEANEI
Sbjct: 219 VPGISEAEKQRLLHCVVVGGGPTGVEFSGELSDFITRDVHQRYAHVKNYIHVTLIEANEI 278
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFDDRLRHYAT QL+KSGVRLVRGIVKDV K+ILN+GTEVPYGLLVWSTGVGPS+
Sbjct: 279 LSSFDDRLRHYATRQLTKSGVRLVRGIVKDVKVDKIILNNGTEVPYGLLVWSTGVGPSSF 338
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
VKS+++PKSPGGRIGIDEWLRVPS QD+FA+GDCSG+LESTGK VLPALAQVAERQGKYL
Sbjct: 339 VKSMEVPKSPGGRIGIDEWLRVPSAQDIFAIGDCSGFLESTGKPVLPALAQVAERQGKYL 398
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
LNRIGKAGGG AN A+DME G+PFVY+HLGSMA++GRYKALVDLRQ KE KGLSLAG
Sbjct: 399 AEQLNRIGKAGGGYANRARDMEFGEPFVYKHLGSMASLGRYKALVDLRQGKEGKGLSLAG 458
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
F SW++WRSAYLTRV+SWRNR YVA+NWATTFVFGRDISRI
Sbjct: 459 FTSWIIWRSAYLTRVLSWRNRLYVAINWATTFVFGRDISRI 499
>gi|356553084|ref|XP_003544888.1| PREDICTED: probable NADH dehydrogenase-like [Glycine max]
Length = 485
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 234/281 (83%), Positives = 263/281 (93%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ GI EEEK RLLHCVVVGGGPTGVEFSGELSDFI+RDVRQRY+HVKDYIHVTLIEANEI
Sbjct: 205 VPGIEEEEKQRLLHCVVVGGGPTGVEFSGELSDFIVRDVRQRYAHVKDYIHVTLIEANEI 264
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFD RLR YAT QL+KSGVRLVRGIVKDV+ +K+ILNDGTEVPYGLLVWSTGVGPS +
Sbjct: 265 LSSFDVRLRQYATNQLTKSGVRLVRGIVKDVEEKKIILNDGTEVPYGLLVWSTGVGPSAI 324
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
++SLDLPK+PGGRIGIDEWLRVP+V+D+F++GDCSG++ESTGKT LPALAQVAERQGKYL
Sbjct: 325 IQSLDLPKAPGGRIGIDEWLRVPTVEDIFSIGDCSGFVESTGKTPLPALAQVAERQGKYL 384
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
LLN+IGKA GGRANSAKD++ GD FVY+H+GSMA+IG YKALVDLRQ+KE KGLSLAG
Sbjct: 385 AFLLNKIGKANGGRANSAKDVDFGDQFVYKHMGSMASIGSYKALVDLRQSKEGKGLSLAG 444
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
F+SW +WRSAYLTRV+SWRNRFYVA+NWATT VFGRDISRI
Sbjct: 445 FVSWFIWRSAYLTRVISWRNRFYVAINWATTLVFGRDISRI 485
>gi|255560820|ref|XP_002521423.1| Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial
precursor, putative [Ricinus communis]
gi|223539322|gb|EEF40913.1| Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial
precursor, putative [Ricinus communis]
Length = 546
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 226/279 (81%), Positives = 252/279 (90%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
GI EEEK RLLHCVV+GGGPTGVEFSGELSDFIMRDV++RY+HVKD+I VTLIEANEILS
Sbjct: 267 GIPEEEKKRLLHCVVIGGGPTGVEFSGELSDFIMRDVQERYAHVKDHIKVTLIEANEILS 326
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
SFD LR YAT L+KSGVRL RG+VK+V +KL L+DGTEVPYGLLVWSTGVGPS VK
Sbjct: 327 SFDVGLRQYATNHLTKSGVRLARGVVKEVHPKKLALSDGTEVPYGLLVWSTGVGPSQFVK 386
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
SLDLPKSPGGRIGIDEWLRVPSV+DVFA+GDC+G+LE TG+ VLPALAQVAERQGKYL
Sbjct: 387 SLDLPKSPGGRIGIDEWLRVPSVEDVFALGDCAGFLEQTGRPVLPALAQVAERQGKYLVG 446
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
L N+IGK GG+A AKD+ LGDPFVY+H+GSMA++GRYKALVDLRQ+K++KGLSLAGF
Sbjct: 447 LFNKIGKETGGKAFRAKDVRLGDPFVYKHMGSMASVGRYKALVDLRQSKDAKGLSLAGFF 506
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
SWL+WRSAYLTRVVSWRNRFYVAVNWATT VFGRD SRI
Sbjct: 507 SWLIWRSAYLTRVVSWRNRFYVAVNWATTLVFGRDNSRI 545
>gi|21536893|gb|AAM61225.1| putative NADH dehydrogenase (ubiquinone oxidoreductase)
[Arabidopsis thaliana]
Length = 510
Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/281 (83%), Positives = 261/281 (92%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ GI E+EK RLLHCVVVGGGPTGVEFSGELSDFIM+DVRQRYSHVKD I VTLIEA +I
Sbjct: 230 VPGIGEDEKKRLLHCVVVGGGPTGVEFSGELSDFIMKDVRQRYSHVKDDIRVTLIEARDI 289
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFDDRLRHYA QL+KSGV+LVRGIVK+V QKLIL+DGTEVPYGLLVWSTGVGPS+
Sbjct: 290 LSSFDDRLRHYAIKQLNKSGVKLVRGIVKEVKPQKLILDDGTEVPYGLLVWSTGVGPSSF 349
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
V+SLD PK PGGRIGIDEW+RVPSVQDVFA+GDCSGYLESTGK+ LPALAQVAER+GKYL
Sbjct: 350 VRSLDFPKDPGGRIGIDEWMRVPSVQDVFAIGDCSGYLESTGKSTLPALAQVAEREGKYL 409
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
+L N +GKAGGGRANSAK+MELG+PFVY+HLGSMATIGRYKALVDLR++KE KG+S+AG
Sbjct: 410 TNLFNVMGKAGGGRANSAKEMELGEPFVYKHLGSMATIGRYKALVDLRESKEGKGISMAG 469
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
FLSW +WRSAYLTRVVSWRNRFYVA+NW TTFVFGRDISRI
Sbjct: 470 FLSWFIWRSAYLTRVVSWRNRFYVAINWLTTFVFGRDISRI 510
>gi|224104264|ref|XP_002313376.1| predicted protein [Populus trichocarpa]
gi|222849784|gb|EEE87331.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/281 (85%), Positives = 259/281 (92%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ G+SEEEKSRLLHCVVVGGGPTGVEFSGELSDFI++DVRQ YSHVKDYIHVTLIEANEI
Sbjct: 172 MPGLSEEEKSRLLHCVVVGGGPTGVEFSGELSDFILKDVRQTYSHVKDYIHVTLIEANEI 231
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFDD LR YAT QL+KSGV LVRGIVKDV QKLIL DGTEVPYGLLVWSTGVGPS+
Sbjct: 232 LSSFDDSLRRYATKQLTKSGVHLVRGIVKDVKPQKLILTDGTEVPYGLLVWSTGVGPSSF 291
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
VKSL+L KSPGGRIGIDEWLRVPSV DVFA+GDCSG+LESTGK VLPALAQVAERQGKYL
Sbjct: 292 VKSLELSKSPGGRIGIDEWLRVPSVPDVFAIGDCSGFLESTGKPVLPALAQVAERQGKYL 351
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
LLN+IGK GGGR S +++ELGDPFVYRHLGSMATIGRYKALVDLRQ+KE+KGL+L G
Sbjct: 352 AKLLNKIGKDGGGRRTSGEEVELGDPFVYRHLGSMATIGRYKALVDLRQSKEAKGLALKG 411
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
F SW +WRSAYLTRV+SWRNRFYVA+NWATTFVFGRDISRI
Sbjct: 412 FASWFIWRSAYLTRVISWRNRFYVAINWATTFVFGRDISRI 452
>gi|385274841|dbj|BAM13875.1| type II NAD(P)H dehydrogenase [Arum maculatum]
Length = 556
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 224/279 (80%), Positives = 254/279 (91%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
G+SEEEKSRLLHCVV+GGGPTGVEFSGELSDFI RDVRQRYSHVKDY+ VTLIEANEILS
Sbjct: 277 GVSEEEKSRLLHCVVIGGGPTGVEFSGELSDFITRDVRQRYSHVKDYVRVTLIEANEILS 336
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
SFD LR YAT L+KSGVRLVRG+VK+V +K++L+DGTEVPYGLLVWSTGVGPS K
Sbjct: 337 SFDVSLRQYATNHLTKSGVRLVRGVVKEVMPKKILLSDGTEVPYGLLVWSTGVGPSGFTK 396
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
S+DLPKSPGGRIGIDEWLRVPSV DVFA+GDC+G+L+ TGK VLPALAQVAERQGKYL
Sbjct: 397 SIDLPKSPGGRIGIDEWLRVPSVDDVFALGDCAGFLQETGKPVLPALAQVAERQGKYLAD 456
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
LLNRIGK GG+A +++ ++L DPFVYRHLGSMA++GRYKALVDLRQ+K++KGL++AGF+
Sbjct: 457 LLNRIGKQNGGKAFASRGIDLRDPFVYRHLGSMASVGRYKALVDLRQSKDAKGLAMAGFV 516
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
SW +WRSAYLTRVVSWRNRFYVAVNWATT VFGRD SRI
Sbjct: 517 SWFIWRSAYLTRVVSWRNRFYVAVNWATTLVFGRDNSRI 555
>gi|18390737|ref|NP_563783.1| alternative NAD(P)H dehydrogenase 1 [Arabidopsis thaliana]
gi|75328901|sp|Q8GWA1.1|NDA1_ARATH RecName: Full=Alternative NAD(P)H dehydrogenase 1, mitochondrial;
AltName: Full=Internal non-phosphorylating NAD(P)H
dehydrogenase 1; Short=AtNDI1; Flags: Precursor
gi|26452964|dbj|BAC43558.1| unknown protein [Arabidopsis thaliana]
gi|28973319|gb|AAO63984.1| unknown protein [Arabidopsis thaliana]
gi|332189968|gb|AEE28089.1| alternative NAD(P)H dehydrogenase 1 [Arabidopsis thaliana]
Length = 510
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 235/281 (83%), Positives = 260/281 (92%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ GI E+EK RLLHCVVVGGGPTGVEFSGELSDFIM+DVRQRYSHVKD I VTLIEA +I
Sbjct: 230 VPGIGEDEKKRLLHCVVVGGGPTGVEFSGELSDFIMKDVRQRYSHVKDDIRVTLIEARDI 289
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFDDRLRHYA QL+KSGV+LVRGIVK+V QKLIL+DGTEVPYG LVWSTGVGPS+
Sbjct: 290 LSSFDDRLRHYAIKQLNKSGVKLVRGIVKEVKPQKLILDDGTEVPYGPLVWSTGVGPSSF 349
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
V+SLD PK PGGRIGIDEW+RVPSVQDVFA+GDCSGYLESTGK+ LPALAQVAER+GKYL
Sbjct: 350 VRSLDFPKDPGGRIGIDEWMRVPSVQDVFAIGDCSGYLESTGKSTLPALAQVAEREGKYL 409
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
+L N +GKAGGGRANSAK+MELG+PFVY+HLGSMATIGRYKALVDLR++KE KG+S+AG
Sbjct: 410 ANLFNVMGKAGGGRANSAKEMELGEPFVYKHLGSMATIGRYKALVDLRESKEGKGISMAG 469
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
FLSW +WRSAYLTRVVSWRNRFYVA+NW TTFVFGRDISRI
Sbjct: 470 FLSWFIWRSAYLTRVVSWRNRFYVAINWLTTFVFGRDISRI 510
>gi|297843508|ref|XP_002889635.1| hypothetical protein ARALYDRAFT_887930 [Arabidopsis lyrata subsp.
lyrata]
gi|297335477|gb|EFH65894.1| hypothetical protein ARALYDRAFT_887930 [Arabidopsis lyrata subsp.
lyrata]
Length = 509
Score = 472 bits (1215), Expect = e-131, Method: Compositional matrix adjust.
Identities = 234/281 (83%), Positives = 261/281 (92%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ GISE+EK RLLHCVVVGGGPTGVEFSGELSDFIM+DVRQRY+HVKD I VTLIEA +I
Sbjct: 229 VPGISEDEKKRLLHCVVVGGGPTGVEFSGELSDFIMKDVRQRYAHVKDDIRVTLIEARDI 288
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFDDRLR YA QL+KSGV+LVRGIVK+V QKLIL+DGTEVPYGLLVWSTGVGPS+
Sbjct: 289 LSSFDDRLRQYAIKQLNKSGVKLVRGIVKEVKPQKLILDDGTEVPYGLLVWSTGVGPSSF 348
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
V+SLD PK PGGRIGIDEW+RVPSVQDVFA+GDCSGYLESTGK+ LPALAQVAER+GKYL
Sbjct: 349 VRSLDFPKDPGGRIGIDEWMRVPSVQDVFAIGDCSGYLESTGKSTLPALAQVAEREGKYL 408
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
+L N +GKAGGGRANSAK+MELG+PFVY+HLGSMATIGRYKALVDLR++KE KG+S+AG
Sbjct: 409 ANLFNVMGKAGGGRANSAKEMELGEPFVYKHLGSMATIGRYKALVDLRESKEGKGISMAG 468
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
F+SW +WRSAYLTRVVSWRNRFYVA+NW TTFVFGRDISRI
Sbjct: 469 FVSWFIWRSAYLTRVVSWRNRFYVAINWLTTFVFGRDISRI 509
>gi|385274831|dbj|BAM13870.1| type II NAD(P)H dehydrogenase [Symplocarpus renifolius]
Length = 553
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 223/279 (79%), Positives = 250/279 (89%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
GISEEEK+RLLHCVV+GGGPTGVEFSGELSDFIMRDVRQRYSHVKDY+ VTLIEANEILS
Sbjct: 274 GISEEEKNRLLHCVVIGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYVRVTLIEANEILS 333
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
SFD LR YAT L KSGVRLVRG+VK+V +K+ILNDGT+VPYGLLVWSTGVG S +K
Sbjct: 334 SFDVSLRQYATNHLQKSGVRLVRGVVKEVLPKKIILNDGTDVPYGLLVWSTGVGASGFIK 393
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
SL+LPKSPGGRIGIDEW+RVPSV+DVFA+GDC+G+LE TG+ VLPALAQVAER+GKYL
Sbjct: 394 SLNLPKSPGGRIGIDEWMRVPSVEDVFALGDCAGFLEQTGRPVLPALAQVAEREGKYLAE 453
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
L +IGK GGRA SAKD LGDPFVY+H GSMA++G YKALVDLRQ+K++KGL++AGF+
Sbjct: 454 LFVKIGKQDGGRAFSAKDASLGDPFVYKHFGSMASVGGYKALVDLRQSKDAKGLTMAGFV 513
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
SW VWRSAYLTRVVSWRNRFYVA NWATT VFGRD SRI
Sbjct: 514 SWFVWRSAYLTRVVSWRNRFYVATNWATTLVFGRDNSRI 552
>gi|297826393|ref|XP_002881079.1| NDA2 H dehydrogenase 2 [Arabidopsis lyrata subsp. lyrata]
gi|297326918|gb|EFH57338.1| NDA2 H dehydrogenase 2 [Arabidopsis lyrata subsp. lyrata]
Length = 504
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 234/279 (83%), Positives = 258/279 (92%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
GIS+EEK RLLHCVVVGGGPTGVEFSGELSDFIM+DVRQRYSHVKD IHVTLIEA +ILS
Sbjct: 226 GISKEEKKRLLHCVVVGGGPTGVEFSGELSDFIMKDVRQRYSHVKDDIHVTLIEARDILS 285
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
SFDDRLR YA QL+KSGVR VRGIVKDV SQKLIL+DGTEVPYGLLVWSTGVGPS+ V+
Sbjct: 286 SFDDRLRRYAIKQLNKSGVRFVRGIVKDVQSQKLILDDGTEVPYGLLVWSTGVGPSSFVR 345
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
SL LPK P GRIGIDEW+RVPSVQDVFA+GDCSGYLE+TGK LPALAQVAER+GKYL +
Sbjct: 346 SLGLPKDPTGRIGIDEWMRVPSVQDVFAIGDCSGYLETTGKPTLPALAQVAEREGKYLAN 405
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
LLN IGKA GGRANSAK++ELG PFVY+HLGSMATIGRYKALVDLR++K++KG+S+ GF+
Sbjct: 406 LLNEIGKANGGRANSAKEIELGAPFVYKHLGSMATIGRYKALVDLRESKDAKGISMTGFV 465
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
SW +WRSAYLTRVVSWRNRFYVA+NW TTFVFGRDISRI
Sbjct: 466 SWFIWRSAYLTRVVSWRNRFYVAINWFTTFVFGRDISRI 504
>gi|356539622|ref|XP_003538295.1| PREDICTED: probable NADH dehydrogenase-like [Glycine max]
Length = 509
Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/281 (82%), Positives = 258/281 (91%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ GISEEEK RLLHCVVVGGGPTGVEFSGELSDFI +DVRQRY HVKDYI VTLIEANEI
Sbjct: 229 VPGISEEEKQRLLHCVVVGGGPTGVEFSGELSDFITKDVRQRYVHVKDYIRVTLIEANEI 288
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFDDRLR YAT QL+KSGVRLVRGIVKDV QK+ LNDG+EVPYGLLVWSTGVGP +
Sbjct: 289 LSSFDDRLRRYATKQLTKSGVRLVRGIVKDVKPQKISLNDGSEVPYGLLVWSTGVGPLPM 348
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
++SLDLPK+PGGRIG+DEWLRVPSVQDVF++GDCSG++ESTG+ LPALAQVAERQGKYL
Sbjct: 349 IQSLDLPKAPGGRIGVDEWLRVPSVQDVFSIGDCSGFVESTGRQTLPALAQVAERQGKYL 408
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
+LLN+IGKAG G ANSAK++E GDPFVYRHLGSMATIGRYKALVDLRQ KE+KGL+LAG
Sbjct: 409 AALLNKIGKAGAGHANSAKEIEFGDPFVYRHLGSMATIGRYKALVDLRQTKEAKGLALAG 468
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
FLS+ +WRSAY+TRV+SWRNRFYV VNW TT VFGRDISR+
Sbjct: 469 FLSFFIWRSAYITRVISWRNRFYVFVNWITTVVFGRDISRL 509
>gi|224116196|ref|XP_002317236.1| predicted protein [Populus trichocarpa]
gi|222860301|gb|EEE97848.1| predicted protein [Populus trichocarpa]
Length = 488
Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust.
Identities = 223/279 (79%), Positives = 251/279 (89%), Gaps = 1/279 (0%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
GI EEEK RLLHCVV+GGGPTGVEFSGELSDFIMRDVR RY+HVKDY+ VTLIEANEILS
Sbjct: 211 GIPEEEKKRLLHCVVIGGGPTGVEFSGELSDFIMRDVRDRYTHVKDYVKVTLIEANEILS 270
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
SFD LR YAT L+KSGV +RG+VK+V + ++LNDGT VPYGLLVWSTGVGPS VK
Sbjct: 271 SFDVSLRQYATNHLTKSGVGFMRGVVKEVHPKNIVLNDGTNVPYGLLVWSTGVGPSQFVK 330
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
SLDLPKSPGGRIGIDEWLRVPSV+DVFA+GDC+G+LE++G+ VLPALAQVAERQGKYL
Sbjct: 331 SLDLPKSPGGRIGIDEWLRVPSVEDVFALGDCAGFLENSGRPVLPALAQVAERQGKYLLE 390
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
L N+IGK GG+A SAKD+ LGDPFVY+HLGSMA++GRYKALVDLRQ+K++KGLS AGF+
Sbjct: 391 LFNKIGKH-GGKALSAKDIPLGDPFVYQHLGSMASVGRYKALVDLRQSKDAKGLSHAGFV 449
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
SWL+WRSAYLTRVVSWRNRFYVAVNWATT VFGRD SRI
Sbjct: 450 SWLIWRSAYLTRVVSWRNRFYVAVNWATTLVFGRDNSRI 488
>gi|356566086|ref|XP_003551266.1| PREDICTED: probable NADH dehydrogenase-like [Glycine max]
Length = 506
Score = 468 bits (1205), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/281 (82%), Positives = 259/281 (92%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ GISEEEK RLLHCVVVGGGPTGVEFSGELSDFI RDVRQRY HVKDYI VTLIEANEI
Sbjct: 226 VPGISEEEKQRLLHCVVVGGGPTGVEFSGELSDFITRDVRQRYVHVKDYIRVTLIEANEI 285
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFDDRLR YAT QL+KSGVRLVRGIVKDV QK++LNDG+EVPYGLLVWSTGVGP +
Sbjct: 286 LSSFDDRLRRYATKQLTKSGVRLVRGIVKDVKPQKIVLNDGSEVPYGLLVWSTGVGPLPI 345
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
++SLDLPK+PGGRIG+DEWLRV SVQDVF++GDCSG++ESTG+ LPALAQVAERQGKYL
Sbjct: 346 IQSLDLPKAPGGRIGVDEWLRVSSVQDVFSIGDCSGFVESTGRQTLPALAQVAERQGKYL 405
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
+LLN+IGKAG G ANSAK++E GDPFVYRHLGSMA+IGRYKALVDLRQNKE+KGL+LAG
Sbjct: 406 AALLNKIGKAGAGHANSAKEIEFGDPFVYRHLGSMASIGRYKALVDLRQNKEAKGLALAG 465
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
FLS+ +WRSAY+TRV+SWRNRFYV VNW TT VFGRDISR+
Sbjct: 466 FLSFFIWRSAYITRVISWRNRFYVFVNWITTVVFGRDISRL 506
>gi|356521315|ref|XP_003529302.1| PREDICTED: probable NADH dehydrogenase-like [Glycine max]
Length = 550
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/279 (78%), Positives = 249/279 (89%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
GISEEEK LLHCVV+GGGPTGVEFSGELSDFIMRDV +RY+HVKDYIHVTLIEANEILS
Sbjct: 271 GISEEEKKCLLHCVVIGGGPTGVEFSGELSDFIMRDVHERYTHVKDYIHVTLIEANEILS 330
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
SFD LR YAT L+KSGVRL+RG+VK+V +K+IL+DGTEVPYGLLVWSTGVG S VK
Sbjct: 331 SFDVSLRQYATKHLTKSGVRLMRGVVKEVHPKKIILSDGTEVPYGLLVWSTGVGASQFVK 390
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
+LDLPKS GGRIG+D+WLRVPSV+DVFA+GDC+G+LE TG+ VLPALAQVAERQGK+L
Sbjct: 391 TLDLPKSQGGRIGVDDWLRVPSVEDVFALGDCAGFLEHTGRPVLPALAQVAERQGKFLVE 450
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
L N IG GG+A SAK M G+PFVYRHLGSMA++G YKALVDLRQ+K+SKGLSLAGF+
Sbjct: 451 LFNEIGNQNGGKAYSAKGMPFGEPFVYRHLGSMASVGGYKALVDLRQSKDSKGLSLAGFV 510
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
SW++WRSAYLTRV+SWRNRFYVAVNWATT VFGRD SRI
Sbjct: 511 SWMIWRSAYLTRVLSWRNRFYVAVNWATTLVFGRDNSRI 549
>gi|356527921|ref|XP_003532554.1| PREDICTED: probable NADH dehydrogenase-like [Glycine max]
Length = 550
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/279 (78%), Positives = 252/279 (90%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
GISEE+K RLLHCVV+GGGPTGVEFSGELSDFIMRDV++RY+HVKDYIHVTLIEANEILS
Sbjct: 271 GISEEDKKRLLHCVVIGGGPTGVEFSGELSDFIMRDVQERYTHVKDYIHVTLIEANEILS 330
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
SFD LR YAT L+KSGVRL+RG+VK+V +K+IL+DGTEVPYGLLVWSTGVG S VK
Sbjct: 331 SFDVSLRQYATKHLTKSGVRLMRGVVKEVHPKKIILSDGTEVPYGLLVWSTGVGASEFVK 390
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
+LDLPKS GGRIG+D+WLRVPSV+DVFA+GDC+G+LE TG+ VLPALAQVAERQGK+L
Sbjct: 391 TLDLPKSQGGRIGVDDWLRVPSVEDVFALGDCAGFLEHTGRPVLPALAQVAERQGKFLVE 450
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
L + IG GG+A SAK M LG+PFVY+HLGSMA++G YKALVDLRQ+K+SKGLSLAGF+
Sbjct: 451 LFDEIGNQNGGKAYSAKGMPLGEPFVYKHLGSMASVGGYKALVDLRQSKDSKGLSLAGFV 510
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
SW++WRSAYLTRV+SWRNRFYVAVNWATT VFGRD SRI
Sbjct: 511 SWMIWRSAYLTRVLSWRNRFYVAVNWATTLVFGRDNSRI 549
>gi|385274833|dbj|BAM13871.1| type II NAD(P)H dehydrogenase [Symplocarpus renifolius]
Length = 553
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/279 (79%), Positives = 246/279 (88%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
GISEEEK RLLHCVV+GGGPTGVEFSGELSDFIMRDVRQRYSHVKDY+ VTLIEANEILS
Sbjct: 274 GISEEEKKRLLHCVVIGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYVRVTLIEANEILS 333
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
SFD LR YAT L KSGVRLVRG+VK+V +K+ILNDGTEVPYGLLVWSTGVG S +K
Sbjct: 334 SFDVGLRQYATNHLQKSGVRLVRGVVKEVLPRKIILNDGTEVPYGLLVWSTGVGASGFIK 393
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
SL+LPKSPGGRIGIDEWLRVPSV+DVFA+GDC+G+LE TG+ VLPALAQVAER+GKYL
Sbjct: 394 SLNLPKSPGGRIGIDEWLRVPSVEDVFALGDCAGFLEQTGRPVLPALAQVAEREGKYLAE 453
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
L +IGK GGRA SAKD LGDPFVY+H GSMA++G YKALVDLRQ+ ++KG +LAGF
Sbjct: 454 LFVKIGKQDGGRAFSAKDASLGDPFVYKHFGSMASVGGYKALVDLRQSTDAKGPTLAGFG 513
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
SW +WRSAYLTRVVSWRNRFYVA NWATT VFGRD SRI
Sbjct: 514 SWFIWRSAYLTRVVSWRNRFYVAANWATTLVFGRDNSRI 552
>gi|8954028|gb|AAF82202.1|AC067971_10 Strong similarity to an unknown protein F23F1.9 gi|7432659 from
Arabidopsis thaliana BAC F23F1 gb|AC004680. It contains
a pyridine nucleotide-disulphide oxidoreductase domain
PF|00070. EST gb|AI997290 comes from this gene
[Arabidopsis thaliana]
Length = 512
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/280 (83%), Positives = 257/280 (91%), Gaps = 4/280 (1%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFD 67
E+EK RLLHCVVVGGGPTGVEFSGELSDFIM+DVRQRYSHVKD I VTLIEA +ILSSFD
Sbjct: 233 EDEKKRLLHCVVVGGGPTGVEFSGELSDFIMKDVRQRYSHVKDDIRVTLIEARDILSSFD 292
Query: 68 DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
DRLRHYA QL+KSGV+LVRGIVK+V QKLIL+DGTEVPYG LVWSTGVGPS+ V+SLD
Sbjct: 293 DRLRHYAIKQLNKSGVKLVRGIVKEVKPQKLILDDGTEVPYGPLVWSTGVGPSSFVRSLD 352
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ----VAERQGKYLF 183
PK PGGRIGIDEW+RVPSVQDVFA+GDCSGYLESTGK+ LPALAQ VAER+GKYL
Sbjct: 353 FPKDPGGRIGIDEWMRVPSVQDVFAIGDCSGYLESTGKSTLPALAQVSNVVAEREGKYLA 412
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
+L N +GKAGGGRANSAK+MELG+PFVY+HLGSMATIGRYKALVDLR++KE KG+S+AGF
Sbjct: 413 NLFNVMGKAGGGRANSAKEMELGEPFVYKHLGSMATIGRYKALVDLRESKEGKGISMAGF 472
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
LSW +WRSAYLTRVVSWRNRFYVA+NW TTFVFGRDISRI
Sbjct: 473 LSWFIWRSAYLTRVVSWRNRFYVAINWLTTFVFGRDISRI 512
>gi|15227684|ref|NP_180560.1| NADH dehydrogenase [Arabidopsis thaliana]
gi|75318710|sp|O80874.1|NDA2_ARATH RecName: Full=Alternative NAD(P)H dehydrogenase 2, mitochondrial;
Flags: Precursor
gi|3420052|gb|AAC31853.1| putative NADH dehydrogenase (ubiquinone oxidoreductase)
[Arabidopsis thaliana]
gi|330253238|gb|AEC08332.1| NADH dehydrogenase [Arabidopsis thaliana]
Length = 508
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/279 (82%), Positives = 256/279 (91%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
GIS+EEK RLLHCVVVGGGPTGVEFSGELSDFIM+DVRQRY+HVKD IHVTLIEA +ILS
Sbjct: 230 GISKEEKRRLLHCVVVGGGPTGVEFSGELSDFIMKDVRQRYAHVKDDIHVTLIEARDILS 289
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
SFDDRLR YA QL+KSGVR VRGIVKDV SQKLIL+DGTEVPYGLLVWSTGVGPS V+
Sbjct: 290 SFDDRLRRYAIKQLNKSGVRFVRGIVKDVQSQKLILDDGTEVPYGLLVWSTGVGPSPFVR 349
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
SL LPK P GRIGIDEW+RVPSVQDVFA+GDCSGYLE+TGK LPALAQVAER+GKYL +
Sbjct: 350 SLGLPKDPTGRIGIDEWMRVPSVQDVFAIGDCSGYLETTGKPTLPALAQVAEREGKYLAN 409
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
LLN IGK GGRANSAK++ELG PFVY+HLGSMATIGRYKALVDLR++K++KG+S+ GF+
Sbjct: 410 LLNAIGKGNGGRANSAKEIELGVPFVYKHLGSMATIGRYKALVDLRESKDAKGISMTGFV 469
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
SW +WRSAYLTRV+SWRNRFYVA+NW TTFVFGRDISRI
Sbjct: 470 SWFIWRSAYLTRVISWRNRFYVAINWFTTFVFGRDISRI 508
>gi|359496334|ref|XP_002262771.2| PREDICTED: probable NADH dehydrogenase-like [Vitis vinifera]
gi|296080966|emb|CBI18598.3| unnamed protein product [Vitis vinifera]
Length = 546
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 217/280 (77%), Positives = 251/280 (89%), Gaps = 1/280 (0%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYS-HVKDYIHVTLIEANEIL 63
GISEEEK RLLHCVV+GGGPTGVEFSGELSDFIMRDVR+RYS HVKDYI VTLIEANEIL
Sbjct: 266 GISEEEKKRLLHCVVIGGGPTGVEFSGELSDFIMRDVRERYSTHVKDYIQVTLIEANEIL 325
Query: 64 SSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
SSF+ LR YAT L+KSGV RG+VK+V ++K++L+DGT+VPYGLLVWSTGVGPS V
Sbjct: 326 SSFEVGLRQYATNHLTKSGVHFKRGVVKEVHAKKIVLSDGTDVPYGLLVWSTGVGPSEFV 385
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
KSL++ KSPGGRIG+DEW R+PSV+DVFA+GDC+G+LE TGK VLPALAQVAERQGK+L
Sbjct: 386 KSLNVSKSPGGRIGVDEWFRIPSVEDVFALGDCAGFLEQTGKQVLPALAQVAERQGKFLV 445
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
L NRIGK GG+A S KD+ +G+PFVY+HLGSMA++GRYKALVDLRQ+K+++G+S AGF
Sbjct: 446 ELFNRIGKENGGKALSGKDIPMGEPFVYKHLGSMASVGRYKALVDLRQSKDARGISHAGF 505
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+SWLVWRSAYLTRVVSWRNRFYVAVNWATT VFGRD SRI
Sbjct: 506 ISWLVWRSAYLTRVVSWRNRFYVAVNWATTLVFGRDNSRI 545
>gi|224076814|ref|XP_002305005.1| predicted protein [Populus trichocarpa]
gi|222847969|gb|EEE85516.1| predicted protein [Populus trichocarpa]
Length = 451
Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust.
Identities = 216/279 (77%), Positives = 251/279 (89%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
GISEEEK LLHCVV+GGGPTGVEFSGELSDFI RDV+ RY+HVKDY+ VTLIEA+EILS
Sbjct: 172 GISEEEKKHLLHCVVIGGGPTGVEFSGELSDFIKRDVQDRYTHVKDYVKVTLIEASEILS 231
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
SFD LR YAT L+KSGV L+RG+VK+V +K++L+D T VPYGLLVWSTGVGPS VK
Sbjct: 232 SFDVGLRQYATNHLTKSGVSLMRGVVKEVHPKKIVLSDETNVPYGLLVWSTGVGPSQFVK 291
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
SLDLPK+PGGRIGIDEWLRV SV+DVFA+GDC+G+LE++G+ VLPALAQVAERQGK+L
Sbjct: 292 SLDLPKAPGGRIGIDEWLRVSSVEDVFALGDCAGFLENSGRPVLPALAQVAERQGKFLVK 351
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
LN+IGK GG+A SAKD+ LGDPFVY+HLGSMA++GRYKALVDLRQ+K++KG+SLAGF+
Sbjct: 352 FLNKIGKKDGGKAFSAKDIPLGDPFVYKHLGSMASVGRYKALVDLRQSKDAKGVSLAGFV 411
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
SWL+WRSAYLTRV+SWRNRFYVAVNWATT VFGRD SRI
Sbjct: 412 SWLIWRSAYLTRVISWRNRFYVAVNWATTLVFGRDNSRI 450
>gi|449433882|ref|XP_004134725.1| PREDICTED: alternative NAD(P)H dehydrogenase 1, mitochondrial-like
[Cucumis sativus]
Length = 544
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/280 (77%), Positives = 251/280 (89%), Gaps = 1/280 (0%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
G+SEEEK RLLHCVV+GGGPTGVEFSGELSDFI+RDV+ RY+H+KD I VTLIEANEILS
Sbjct: 264 GLSEEEKKRLLHCVVIGGGPTGVEFSGELSDFIIRDVQDRYAHIKDDIKVTLIEANEILS 323
Query: 65 SFDDRLRHYATTQLSK-SGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
SFD LR YA L+K GVRL+RG+VK+V + K+IL+DGT+VPYGLLVWSTGVGPS V
Sbjct: 324 SFDFGLRTYAAKHLTKVCGVRLMRGVVKEVLADKIILSDGTDVPYGLLVWSTGVGPSEFV 383
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
KSL LPK+PGGRIG+D W+RVPSV+DVFA+GDC+G+LE TGK VLPALAQVAER+GKYL
Sbjct: 384 KSLHLPKAPGGRIGVDGWMRVPSVEDVFALGDCAGFLEQTGKPVLPALAQVAEREGKYLV 443
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
L NRIGK GG+A SAKD+ LGDPFVY+HLGSMA++GRYKALVDLRQ+K++KG+SLAGF
Sbjct: 444 ELFNRIGKENGGKALSAKDIPLGDPFVYKHLGSMASVGRYKALVDLRQSKDAKGISLAGF 503
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
LSWL+WRSAYLTRV+SWRNRFYVAVNWATT VFGRD SRI
Sbjct: 504 LSWLIWRSAYLTRVISWRNRFYVAVNWATTLVFGRDNSRI 543
>gi|242054869|ref|XP_002456580.1| hypothetical protein SORBIDRAFT_03g038750 [Sorghum bicolor]
gi|241928555|gb|EES01700.1| hypothetical protein SORBIDRAFT_03g038750 [Sorghum bicolor]
Length = 503
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/281 (80%), Positives = 253/281 (90%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ GISEEEK RLLHCVVVGGGPTGVEFSGELSDFI+RDV+QRYSHVKDYIHVTLIEANEI
Sbjct: 223 VPGISEEEKRRLLHCVVVGGGPTGVEFSGELSDFIIRDVKQRYSHVKDYIHVTLIEANEI 282
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFD RLR YA QL KSGVRLV+GIVKDV K+IL++G EVPYGLLVWSTGVG S
Sbjct: 283 LSSFDVRLRQYAIKQLIKSGVRLVQGIVKDVQPSKIILDNGEEVPYGLLVWSTGVGASPF 342
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
VKSL PKSPGGRIG++EWLRVPSVQDV+A+GDCSG+LESTGK VLPALAQVAERQGKYL
Sbjct: 343 VKSLPFPKSPGGRIGVNEWLRVPSVQDVYAIGDCSGFLESTGKEVLPALAQVAERQGKYL 402
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
SLLN + KAGGG ANS + +LG PFVY+HLGSMAT+GRYKALVDLR++KES+G+SLAG
Sbjct: 403 ASLLNHVMKAGGGHANSVTEADLGPPFVYKHLGSMATVGRYKALVDLRKSKESRGISLAG 462
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
F+SW +WRSAYLTRV+SWRNRFYVA+NW TT +FGRDISRI
Sbjct: 463 FVSWFIWRSAYLTRVISWRNRFYVAINWLTTLLFGRDISRI 503
>gi|357475817|ref|XP_003608194.1| External NADH-ubiquinone oxidoreductase [Medicago truncatula]
gi|355509249|gb|AES90391.1| External NADH-ubiquinone oxidoreductase [Medicago truncatula]
Length = 542
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/279 (76%), Positives = 248/279 (88%), Gaps = 2/279 (0%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
GISEEEK RLLHCVV+GGGPTGVEFSGELSDFI RDVR+RY+HVKDYIHVTLIEANEILS
Sbjct: 265 GISEEEKKRLLHCVVIGGGPTGVEFSGELSDFITRDVRERYTHVKDYIHVTLIEANEILS 324
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
SFD LR YAT L+K V L+RG+VK+V QK++L+DGTEVPYGLLVWSTGVGPS VK
Sbjct: 325 SFDVGLRQYATKHLTK--VCLMRGVVKEVHPQKIVLSDGTEVPYGLLVWSTGVGPSEFVK 382
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
+L+LP SPGGRIG+D W+RVPSV+DVFA+GDC+G+LE TG+ VLPALAQVAERQGK+L
Sbjct: 383 TLNLPSSPGGRIGVDGWMRVPSVEDVFALGDCAGFLEQTGRPVLPALAQVAERQGKFLVE 442
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
L N+IGK GG+A SA + LG+ FVY+H+GSMA++G YKALVDLRQ+K++KGLSLAGF+
Sbjct: 443 LFNKIGKQNGGKALSADGITLGEQFVYKHMGSMASVGAYKALVDLRQSKDAKGLSLAGFV 502
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
SWL+WRSAYLTRV+SWRNRFYVAVNW TTFVFGRD SRI
Sbjct: 503 SWLIWRSAYLTRVLSWRNRFYVAVNWGTTFVFGRDNSRI 541
>gi|449479374|ref|XP_004155582.1| PREDICTED: alternative NAD(P)H dehydrogenase 1, mitochondrial-like
[Cucumis sativus]
Length = 546
Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/282 (76%), Positives = 249/282 (88%), Gaps = 3/282 (1%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
G+SEEEK RLLHCVV+GGGPTGVEFSGELSDFI+RDV+ RY+H+KD I VTLIEANEILS
Sbjct: 264 GLSEEEKKRLLHCVVIGGGPTGVEFSGELSDFIIRDVQDRYAHIKDDIKVTLIEANEILS 323
Query: 65 SFDDRLRHYATTQL---SKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPST 121
SFD LR YA L S GVRL+RG+VK+V + K+IL+ GT+VPYGLLVWSTGVGPS
Sbjct: 324 SFDFGLRTYAAKHLTEGSTCGVRLMRGVVKEVLADKIILSGGTDVPYGLLVWSTGVGPSE 383
Query: 122 LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 181
VKSL LPK+PGGRIG+D W+RVPSV+DVFA+GDC+G+LE TGK VLPALAQVAER+GKY
Sbjct: 384 FVKSLHLPKAPGGRIGVDGWMRVPSVEDVFALGDCAGFLEQTGKPVLPALAQVAEREGKY 443
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
L L NRIGK GG+A SAKD+ LGDPFVY+HLGSMA++GRYKALVDLRQ+K++KG+SLA
Sbjct: 444 LVELFNRIGKENGGKALSAKDIPLGDPFVYKHLGSMASVGRYKALVDLRQSKDAKGISLA 503
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
GFLSWL+WRSAYLTRV+SWRNRFYVAVNWATT VFGRD SRI
Sbjct: 504 GFLSWLIWRSAYLTRVISWRNRFYVAVNWATTLVFGRDNSRI 545
>gi|395146552|gb|AFN53705.1| putative rotenone-insensitive NADH-ubiquinone oxidoreductase [Linum
usitatissimum]
Length = 593
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/284 (77%), Positives = 245/284 (86%), Gaps = 5/284 (1%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
G+ EEEK RLLHCVV+GGGPTGVEFSGELSDFI +DVR+R+SHVKD I VTLIEANEILS
Sbjct: 310 GVPEEEKKRLLHCVVIGGGPTGVEFSGELSDFIGKDVRERFSHVKDDIKVTLIEANEILS 369
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
SFD LR YAT L KSGV L+RG+VK+V K++LNDGT VPYGLLVWSTGVGPS VK
Sbjct: 370 SFDLGLRQYATNHLRKSGVNLMRGVVKEVHPHKIVLNDGTNVPYGLLVWSTGVGPSQFVK 429
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
SL LPKSPGGRIG+DE LRVPS DVFA+GDC+G+LESTGK VLPALAQVAERQGKYL
Sbjct: 430 SLALPKSPGGRIGVDEHLRVPSAPDVFAMGDCAGFLESTGKPVLPALAQVAERQGKYLVE 489
Query: 185 LL-NRIGKAGGGRANSA----KDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
L NRIGK GG+A +A D L DPFVY+H+GSMAT+GRYKALVDLRQ+K++KGLS
Sbjct: 490 LFNNRIGKQNGGKAATAGAENDDAVLRDPFVYKHMGSMATVGRYKALVDLRQSKDAKGLS 549
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+AGFLSW++WRSAYLTRVVSWRNRFYVAVNWATTFVFGRD SRI
Sbjct: 550 MAGFLSWVIWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDSSRI 593
>gi|293333995|ref|NP_001168889.1| uncharacterized protein LOC100382694 [Zea mays]
gi|223973511|gb|ACN30943.1| unknown [Zea mays]
gi|413952050|gb|AFW84699.1| hypothetical protein ZEAMMB73_486976 [Zea mays]
Length = 501
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/280 (81%), Positives = 252/280 (90%), Gaps = 1/280 (0%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
GISEEEK RLLHCVVVGGGPTGVEFSGELSDFI+RDV+QRYSHVKDYIHVTLIEANEILS
Sbjct: 222 GISEEEKCRLLHCVVVGGGPTGVEFSGELSDFIIRDVKQRYSHVKDYIHVTLIEANEILS 281
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
SFD RLR YAT QL KSGVRLV+GIVKDV K+IL++G EVPYGLLVWSTGVG S VK
Sbjct: 282 SFDVRLRQYATKQLIKSGVRLVQGIVKDVQPNKIILDNGEEVPYGLLVWSTGVGASPFVK 341
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
SL PKSPGGRIG++EWLRVPSV DV+A+GDCSG+LESTGK VLPALAQVAERQGKYL S
Sbjct: 342 SLPFPKSPGGRIGVNEWLRVPSVHDVYAIGDCSGFLESTGKEVLPALAQVAERQGKYLAS 401
Query: 185 LLNRIGKAGGGRANSAKDMELG-DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
LLN + KAGGG ANS + +LG PFVY+HLGSMAT+GRYKALVDLRQ+KES+G+SLAGF
Sbjct: 402 LLNHVMKAGGGHANSETEADLGRPPFVYKHLGSMATVGRYKALVDLRQSKESRGISLAGF 461
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+SW +WRSAYLTRVVSWRNRFYVA+NW TT +FGRDISRI
Sbjct: 462 VSWFIWRSAYLTRVVSWRNRFYVAINWLTTLLFGRDISRI 501
>gi|222619486|gb|EEE55618.1| hypothetical protein OsJ_03953 [Oryza sativa Japonica Group]
Length = 497
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/281 (81%), Positives = 251/281 (89%), Gaps = 2/281 (0%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ GISEEEK RLLHCVVVGGGPTGVEFSGELSDFI+RDV+QRYSHVKDYIHVTLIEANEI
Sbjct: 219 VPGISEEEKRRLLHCVVVGGGPTGVEFSGELSDFIIRDVKQRYSHVKDYIHVTLIEANEI 278
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFD RLR YAT QL+KSGVRLVRGIVKDV KLIL++G EVPYGLLVWSTGVGPS+
Sbjct: 279 LSSFDVRLRQYATNQLTKSGVRLVRGIVKDVQPNKLILDNGEEVPYGLLVWSTGVGPSSF 338
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
VKSL PKSPGGRIG+DEWLRVPS +DVFA+GDCSG+LESTGK VLPALAQVAERQGKYL
Sbjct: 339 VKSLPFPKSPGGRIGVDEWLRVPSARDVFAIGDCSGFLESTGKDVLPALAQVAERQGKYL 398
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
LLN + KAGGG AN D++LG FVY+HLGSMAT+GRYKALVDLRQ+K G+SLAG
Sbjct: 399 AHLLNHVMKAGGGHANCEIDVDLGPAFVYKHLGSMATVGRYKALVDLRQSK--AGISLAG 456
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
F+SW +WRSAYLTRVVSWRNRFYVA+NW TT +FGRDISRI
Sbjct: 457 FVSWFIWRSAYLTRVVSWRNRFYVAINWLTTLLFGRDISRI 497
>gi|218189310|gb|EEC71737.1| hypothetical protein OsI_04297 [Oryza sativa Indica Group]
Length = 497
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/281 (81%), Positives = 251/281 (89%), Gaps = 2/281 (0%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ GISEEEK RLLHCVVVGGGPTGVEFSGELSDFI+RDV+QRYSHVKDYIHVTLIEANEI
Sbjct: 219 VPGISEEEKRRLLHCVVVGGGPTGVEFSGELSDFIIRDVKQRYSHVKDYIHVTLIEANEI 278
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFD RLR YAT QL+KSGVRLVRGIVKDV KLIL++G EVPYGLLVWSTGVGPS+
Sbjct: 279 LSSFDVRLRQYATNQLTKSGVRLVRGIVKDVQPNKLILDNGEEVPYGLLVWSTGVGPSSF 338
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
VKSL PKSPGGRIG+DEWLRVPS +DVFA+GDCSG+LESTGK VLPALAQVAERQGKYL
Sbjct: 339 VKSLPFPKSPGGRIGVDEWLRVPSARDVFAIGDCSGFLESTGKDVLPALAQVAERQGKYL 398
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
LLN + KAGGG AN D++LG FVY+HLGSMAT+GRYKALVDLRQ+K G+SLAG
Sbjct: 399 AHLLNHVMKAGGGHANCEIDVDLGPAFVYKHLGSMATVGRYKALVDLRQSK--AGISLAG 456
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
F+SW +WRSAYLTRVVSWRNRFYVA+NW TT +FGRDISRI
Sbjct: 457 FVSWFIWRSAYLTRVVSWRNRFYVAINWLTTLLFGRDISRI 497
>gi|357125695|ref|XP_003564526.1| PREDICTED: probable NADH dehydrogenase-like [Brachypodium
distachyon]
Length = 496
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/281 (80%), Positives = 250/281 (88%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ GISEEEK RLLHCVVVGGGPTGVEFSGELSDFI+RDV+QRYSHVKDY+HVTLIEANEI
Sbjct: 216 VPGISEEEKRRLLHCVVVGGGPTGVEFSGELSDFIIRDVKQRYSHVKDYVHVTLIEANEI 275
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFD RLR YA QL KSGVRLVRGIVKDV KLIL++G EVPYGLLVWSTGVG S+
Sbjct: 276 LSSFDVRLRQYAINQLVKSGVRLVRGIVKDVLPDKLILDNGEEVPYGLLVWSTGVGASSF 335
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
VKSL PKSPGGRIG+DEWLRVPS DVFA+GDCSG+LESTGK VLPALAQVAERQGKYL
Sbjct: 336 VKSLPFPKSPGGRIGVDEWLRVPSAPDVFAIGDCSGFLESTGKEVLPALAQVAERQGKYL 395
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
SLLN + K GGG ANS +M+LG FVY+H+GSMAT+GRYKALVDLRQ+K+S+G+S+AG
Sbjct: 396 ASLLNHVMKVGGGHANSVVEMDLGPKFVYKHMGSMATVGRYKALVDLRQSKDSRGVSIAG 455
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
F SW +WRSAYLTRVVSWRNRFYVA+NW TT +FGRDISRI
Sbjct: 456 FASWFIWRSAYLTRVVSWRNRFYVAINWLTTLLFGRDISRI 496
>gi|5734585|emb|CAB52796.1| putative internal rotenone-insensitive NADH dehydrogenase [Solanum
tuberosum]
Length = 495
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/281 (79%), Positives = 253/281 (90%), Gaps = 1/281 (0%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ G+SEEEK RLLHCVVVGGGPTGVEFSGELSDFI++DV QRY+HVKDYIHVTLIEANEI
Sbjct: 216 VPGVSEEEKRRLLHCVVVGGGPTGVEFSGELSDFILKDVHQRYAHVKDYIHVTLIEANEI 275
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFDDRLR YAT QL+KSGVRLVRG+V+ V +IL+DGT VPYGLLVWSTGVGPS
Sbjct: 276 LSSFDDRLRVYATNQLTKSGVRLVRGLVQHVQPDNIILSDGTNVPYGLLVWSTGVGPSPF 335
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
V SLD+PK+ G RIGIDEWLRVPSVQDV+++GDCSG+LESTG+ VLPALAQVAERQGKYL
Sbjct: 336 VNSLDIPKAKG-RIGIDEWLRVPSVQDVYSIGDCSGFLESTGRQVLPALAQVAERQGKYL 394
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
SLLN++GK GGG AN A+++ LGDPFVY+HLGSMATIGRYKALVDLR++KE+KG+SLAG
Sbjct: 395 ASLLNKVGKQGGGHANCAQNINLGDPFVYKHLGSMATIGRYKALVDLRESKEAKGVSLAG 454
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
F S+ VWRSAYLTRVVSWRN+ YV +NW TT VFGRDISRI
Sbjct: 455 FTSFFVWRSAYLTRVVSWRNKIYVLINWLTTLVFGRDISRI 495
>gi|359494544|ref|XP_003634801.1| PREDICTED: LOW QUALITY PROTEIN: probable NADH dehydrogenase-like
[Vitis vinifera]
Length = 505
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/285 (78%), Positives = 249/285 (87%), Gaps = 4/285 (1%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ GI E EK RLLHCVVVGGGP GVEFSGELSDFIMR+V QR++HVK+YIHVTLIEANEI
Sbjct: 221 VPGILEAEKXRLLHCVVVGGGPIGVEFSGELSDFIMRNVHQRFAHVKNYIHVTLIEANEI 280
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFDDRL+HYAT QL+KSGVRLVRGIVKDV K+ILN+GTEVPYGLLVWST VGPS+
Sbjct: 281 LSSFDDRLQHYATRQLTKSGVRLVRGIVKDVKVDKIILNNGTEVPYGLLVWSTRVGPSSF 340
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
VKS+++PKSPGGRIGIDEWLRVPS QD+FA+GDCSG+LESTGK VLPALAQVAERQGKY+
Sbjct: 341 VKSIEVPKSPGGRIGIDEWLRVPSAQDIFAIGDCSGFLESTGKPVLPALAQVAERQGKYI 400
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL----RQNKESKGL 238
LNRIGKAGGG AN A+D E +PF+Y+HLGSM + RYKALVDL RQ KE KGL
Sbjct: 401 AKQLNRIGKAGGGYANKARDKEFREPFIYKHLGSMTFLSRYKALVDLIRDIRQGKEGKGL 460
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
LAGF SW++WRSAYLTR +SWRNR YVA+N ATTFVFGRDISRI
Sbjct: 461 FLAGFTSWIIWRSAYLTRALSWRNRLYVAINXATTFVFGRDISRI 505
>gi|357122343|ref|XP_003562875.1| PREDICTED: probable NADH dehydrogenase-like [Brachypodium
distachyon]
Length = 558
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/280 (77%), Positives = 249/280 (88%), Gaps = 1/280 (0%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
G+SEEEK RLLHCVVVGGGPTGVEFSGELSDFI RDVR+RY+HVKDY+ VTLIEANEILS
Sbjct: 278 GLSEEEKKRLLHCVVVGGGPTGVEFSGELSDFITRDVRERYAHVKDYVKVTLIEANEILS 337
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
SFD LR YAT LSK GV+LVRG+VK+V+ K++L+DGT VPYGLLVWSTGVGPS VK
Sbjct: 338 SFDIGLRQYATNHLSKYGVKLVRGVVKEVEPTKIVLSDGTSVPYGLLVWSTGVGPSEFVK 397
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
SLDLPKSPGGRIG+DEWLRVPS DV+A+GDC+G+LE TGK VLPALAQVAER+GKYL +
Sbjct: 398 SLDLPKSPGGRIGVDEWLRVPSADDVYALGDCAGFLERTGKPVLPALAQVAEREGKYLAA 457
Query: 185 LLNRIGKAGGGRANSA-KDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
LL R+ GG+A+ K +LG+PFVY+HLGSMA++GRYKALVDLR+NK++KG+S+AGF
Sbjct: 458 LLKRVAAQNGGKAHCCGKKTDLGEPFVYKHLGSMASVGRYKALVDLRENKDAKGVSMAGF 517
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+SWLVWRSAYLTRVVSWRNRFYVAVNWATT VFGRD +RI
Sbjct: 518 VSWLVWRSAYLTRVVSWRNRFYVAVNWATTLVFGRDNTRI 557
>gi|326494886|dbj|BAJ85538.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 502
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/281 (79%), Positives = 246/281 (87%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ GISE+EK RLLHCVVVGGGPTGVEFSGELSDFI+RDV++RYSHVKDY+HVTLIEANEI
Sbjct: 222 VPGISEDEKRRLLHCVVVGGGPTGVEFSGELSDFIIRDVKERYSHVKDYVHVTLIEANEI 281
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFD RLR YA QL KSGVRLV+GIVKDV KLIL++G EVPYGLLVWSTGVG S+
Sbjct: 282 LSSFDVRLRQYAINQLVKSGVRLVQGIVKDVQPDKLILDNGEEVPYGLLVWSTGVGASSF 341
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
VKSL PKS GGRIG+DEWLRVPSV DVFAVGDC G+LESTGK VLPALAQVAERQG YL
Sbjct: 342 VKSLPFPKSAGGRIGVDEWLRVPSVPDVFAVGDCCGFLESTGKEVLPALAQVAERQGLYL 401
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
LLN + KAGGG ANS +++LG FVY+HLGSMAT+GRYKALVDLRQ+K SKG+S+AG
Sbjct: 402 ARLLNSVMKAGGGHANSQVEVDLGPKFVYKHLGSMATVGRYKALVDLRQSKGSKGISIAG 461
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
F SW +WRSAYLTRVVSWRNR YVA+NW TT +FGRDISRI
Sbjct: 462 FASWFIWRSAYLTRVVSWRNRLYVAINWLTTMIFGRDISRI 502
>gi|242045990|ref|XP_002460866.1| hypothetical protein SORBIDRAFT_02g036490 [Sorghum bicolor]
gi|241924243|gb|EER97387.1| hypothetical protein SORBIDRAFT_02g036490 [Sorghum bicolor]
Length = 566
Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/279 (75%), Positives = 244/279 (87%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
G+S+EEK RLLHCVVVGGGPTGVEFSGELSDFI RDVRQRY+HVKDY+ VTLIEANEILS
Sbjct: 287 GLSDEEKKRLLHCVVVGGGPTGVEFSGELSDFITRDVRQRYAHVKDYVKVTLIEANEILS 346
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
SFD LR YAT LSK GV LVRGIVK+V ++ L+DGT VPYGLLVWSTGVGPS VK
Sbjct: 347 SFDIGLRQYATNHLSKYGVNLVRGIVKEVKPTEITLSDGTRVPYGLLVWSTGVGPSEFVK 406
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
SLDLPKSPGGRIG+DEWLRVP+ DVFA+GDC+G+LE TGK VLPALAQVAER+G+YL
Sbjct: 407 SLDLPKSPGGRIGVDEWLRVPTAPDVFALGDCAGFLEGTGKPVLPALAQVAEREGRYLAR 466
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
LL ++ GG+A+ A +LG+PFVY+H+GSMA++GRYKALVDLR+NK++KG+S+AGFL
Sbjct: 467 LLGKVAAQNGGKAHCAGKADLGEPFVYKHIGSMASVGRYKALVDLRENKDAKGVSMAGFL 526
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
SWL+WRSAYLTRVVSWRNRFYVAVNW TT VFGRD +RI
Sbjct: 527 SWLMWRSAYLTRVVSWRNRFYVAVNWGTTLVFGRDNTRI 565
>gi|223949989|gb|ACN29078.1| unknown [Zea mays]
gi|414887135|tpg|DAA63149.1| TPA: hypothetical protein ZEAMMB73_653266 [Zea mays]
gi|414887136|tpg|DAA63150.1| TPA: hypothetical protein ZEAMMB73_653266 [Zea mays]
Length = 557
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/279 (75%), Positives = 243/279 (87%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
G+S EEK RLLHCVVVGGGPTGVEFSGELSDFI RDVRQRY+HVKDY+ +TLIEANEILS
Sbjct: 278 GLSAEEKERLLHCVVVGGGPTGVEFSGELSDFITRDVRQRYAHVKDYVKITLIEANEILS 337
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
SFD LR YAT LSK GV LVRGIVK+V + ++ L+DGT VPYGLLVWSTGVGPS V+
Sbjct: 338 SFDIGLRQYATNHLSKYGVNLVRGIVKEVKATEITLSDGTRVPYGLLVWSTGVGPSEFVR 397
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
SL LPKSPGGR+G+DEWLRVP+ DVFA+GDC+G+LE TGK VLPALAQVAER+G+YL
Sbjct: 398 SLHLPKSPGGRVGVDEWLRVPTAPDVFALGDCAGFLEGTGKPVLPALAQVAEREGRYLAR 457
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
LL RI GG+A+ A +LG+PFVY+H+GSMA++GRYKALVDLR+NK++KG+S+AGFL
Sbjct: 458 LLGRIAAQNGGKAHCAGKADLGEPFVYKHIGSMASVGRYKALVDLRENKDAKGVSMAGFL 517
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
SWL+WRSAYLTRVVSWRNRFYVAVNW TT VFGRD +RI
Sbjct: 518 SWLMWRSAYLTRVVSWRNRFYVAVNWGTTLVFGRDNTRI 556
>gi|37725947|gb|AAO27256.1| putative NADH-dehydrogenase [Pisum sativum]
Length = 391
Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/279 (76%), Positives = 244/279 (87%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
GISE K LLHCVVVGGGPTGVEFSGELSDFI +DVR+RY+HVKDYIHVTLIEANEILS
Sbjct: 112 GISEGGKEGLLHCVVVGGGPTGVEFSGELSDFITKDVRERYTHVKDYIHVTLIEANEILS 171
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
SFD LR YA L+KSGVR VRG+VK+V QK++L+DGT+VPYGLLVWSTGVGPS VK
Sbjct: 172 SFDVSLRQYAMKHLTKSGVRFVRGVVKEVHPQKIVLSDGTKVPYGLLVWSTGVGPSEFVK 231
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
L LP SPGGRIG+D W+RVPSV+DVFA+GDC+G+LE TG+ VLPALAQVAERQGK+L
Sbjct: 232 KLYLPVSPGGRIGVDGWMRVPSVEDVFALGDCAGFLEQTGRPVLPALAQVAERQGKFLVE 291
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
L N+IGK GG+A SA + GDPFVY+HLGSMA++G YKALVDLRQ+K++KGLSLAGF+
Sbjct: 292 LFNKIGKQDGGKALSANGIPFGDPFVYKHLGSMASVGAYKALVDLRQSKDAKGLSLAGFV 351
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
SWL+WRSAYLTRV++WRNRFYVAVNW TTFVFGRD SRI
Sbjct: 352 SWLIWRSAYLTRVLNWRNRFYVAVNWGTTFVFGRDNSRI 390
>gi|115472809|ref|NP_001060003.1| Os07g0564500 [Oryza sativa Japonica Group]
gi|22830946|dbj|BAC15811.1| putative NADH dehydrogenase [Oryza sativa Japonica Group]
gi|113611539|dbj|BAF21917.1| Os07g0564500 [Oryza sativa Japonica Group]
gi|215768143|dbj|BAH00372.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 562
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/280 (74%), Positives = 247/280 (88%), Gaps = 1/280 (0%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
G+SEEEK RLLHCVVVGGGPTGVEFSGELSDFI RDVR+RY+HVKDY+ VTLIEANEILS
Sbjct: 282 GLSEEEKKRLLHCVVVGGGPTGVEFSGELSDFITRDVRERYAHVKDYVKVTLIEANEILS 341
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
SFD LR YAT LSK GV LVRG+VK+V +++ L+DG+ VPYG+LVWSTGVGPS V+
Sbjct: 342 SFDVGLRQYATDHLSKYGVNLVRGVVKEVKPREIELSDGSRVPYGVLVWSTGVGPSEFVR 401
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
SL LPKSPGGRIG+DEWLRVPSV+DVFA+GDC+G+LE TG+ VLPALAQVAER+G+YL
Sbjct: 402 SLPLPKSPGGRIGVDEWLRVPSVEDVFALGDCAGFLEGTGRAVLPALAQVAEREGRYLAR 461
Query: 185 LLNRIGKAGGGRANSA-KDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
+++RI GGRA A ELG+PFVY+H+GSMA++GRYKALVDLR+NK+++G+S+AGF
Sbjct: 462 VMSRIAAQDGGRAGRAVGSAELGEPFVYKHIGSMASVGRYKALVDLRENKDARGVSMAGF 521
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+SWL+WRSAYLTRVVSWRNRFYVAVNWATT VFGRD +RI
Sbjct: 522 VSWLMWRSAYLTRVVSWRNRFYVAVNWATTLVFGRDNTRI 561
>gi|125558821|gb|EAZ04357.1| hypothetical protein OsI_26497 [Oryza sativa Indica Group]
Length = 561
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/280 (74%), Positives = 247/280 (88%), Gaps = 1/280 (0%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
G+SEEEK RLLHCVVVGGGPTGVEFSGELSDFI RDVR+RY+HVKDY+ VTLIEANEILS
Sbjct: 281 GLSEEEKKRLLHCVVVGGGPTGVEFSGELSDFITRDVRERYAHVKDYVKVTLIEANEILS 340
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
SFD LR YAT LSK GV LVRG+VK+V +++ L+DG+ VPYG+LVWSTGVGPS V+
Sbjct: 341 SFDVGLRQYATDHLSKYGVNLVRGVVKEVKPREIELSDGSRVPYGVLVWSTGVGPSEFVR 400
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
SL LPKSPGGRIG+DEWLRVPSV+DVFA+GDC+G+LE TG+ VLPALAQVAER+G+YL
Sbjct: 401 SLPLPKSPGGRIGVDEWLRVPSVEDVFALGDCAGFLEGTGRAVLPALAQVAEREGRYLAR 460
Query: 185 LLNRIGKAGGGRANSA-KDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
+++RI GGRA A ELG+PFVY+H+GSMA++GRYKALVDLR+NK+++G+S+AGF
Sbjct: 461 VMSRIAAQDGGRAGRAVGSAELGEPFVYKHIGSMASVGRYKALVDLRENKDARGVSMAGF 520
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+SWL+WRSAYLTRVVSWRNRFYVA+NWATT VFGRD +RI
Sbjct: 521 VSWLMWRSAYLTRVVSWRNRFYVAINWATTLVFGRDNTRI 560
>gi|302793204|ref|XP_002978367.1| hypothetical protein SELMODRAFT_176951 [Selaginella moellendorffii]
gi|300153716|gb|EFJ20353.1| hypothetical protein SELMODRAFT_176951 [Selaginella moellendorffii]
Length = 539
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/281 (75%), Positives = 248/281 (88%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ G+ EEK RLLHCVVVGGGPTGVEFSGELSDFI RDV ++YSHVK+Y+HVTLIEANEI
Sbjct: 259 IPGVPIEEKERLLHCVVVGGGPTGVEFSGELSDFIRRDVHEKYSHVKEYVHVTLIEANEI 318
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFD RLR YA LSKSGV+L+RG+VK+V + +LILNDG+ VPYG+LVWSTGVGPS
Sbjct: 319 LSSFDVRLRQYAVNHLSKSGVKLLRGVVKEVFADRLILNDGSTVPYGVLVWSTGVGPSNF 378
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
VK L+ KSPGGRIG+DE++RVP +D++A+GDC+GYL+STGK +LPALAQVAERQGKYL
Sbjct: 379 VKKLEFEKSPGGRIGVDEYMRVPQFEDIYAIGDCAGYLKSTGKPILPALAQVAERQGKYL 438
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
+ LN + AGGGRA +AK +LG+PFVYRHLGSMA++GRYKALVDLR+NK++KGLS AG
Sbjct: 439 GAALNSLALAGGGRAGAAKTTKLGEPFVYRHLGSMASVGRYKALVDLRENKDAKGLSWAG 498
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR
Sbjct: 499 ILSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRF 539
>gi|302773572|ref|XP_002970203.1| hypothetical protein SELMODRAFT_231541 [Selaginella moellendorffii]
gi|300161719|gb|EFJ28333.1| hypothetical protein SELMODRAFT_231541 [Selaginella moellendorffii]
Length = 462
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/281 (76%), Positives = 248/281 (88%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ G+ EEK RLLHCVVVGGGPTGVEFSGELSDFI RDV ++YSHVK+Y+HVTLIEANEI
Sbjct: 182 IPGVPIEEKERLLHCVVVGGGPTGVEFSGELSDFIRRDVHEKYSHVKEYVHVTLIEANEI 241
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFD RLR YA LSKSGV+L+RG+VK+V + +LILNDG+ VPYG+LVWSTGVGPS
Sbjct: 242 LSSFDVRLRQYAVNHLSKSGVKLLRGVVKEVFADRLILNDGSTVPYGVLVWSTGVGPSNF 301
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
VK L+ KSPGGRIG+DE++RVP +DV+A+GDC+GYL+STGK +LPALAQVAERQGKYL
Sbjct: 302 VKKLEFEKSPGGRIGVDEYMRVPQFEDVYAIGDCAGYLKSTGKPILPALAQVAERQGKYL 361
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
+ LN + AGGGRA +AK +LG+PFVYRHLGSMA++GRYKALVDLR+NK++KGLS AG
Sbjct: 362 GAALNSLALAGGGRAGAAKTTKLGEPFVYRHLGSMASVGRYKALVDLRENKDAKGLSWAG 421
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR
Sbjct: 422 ILSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRF 462
>gi|255569381|ref|XP_002525658.1| Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial
precursor, putative [Ricinus communis]
gi|223535094|gb|EEF36776.1| Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial
precursor, putative [Ricinus communis]
Length = 472
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/244 (85%), Positives = 223/244 (91%), Gaps = 3/244 (1%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFI RDVRQRY+HVKDYIHVTLIEANEI
Sbjct: 218 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFITRDVRQRYAHVKDYIHVTLIEANEI 277
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFDDRLRHYAT QL+KSGV+LVRGIVKDV QKL+L+DG+EVPYGLLVWSTGVGPS L
Sbjct: 278 LSSFDDRLRHYATKQLTKSGVQLVRGIVKDVKPQKLVLSDGSEVPYGLLVWSTGVGPSHL 337
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
VKSLDLPKSPGGRIGIDEWLRVPSV DVFA+GDCSG+LESTGK+VLPALAQVAERQGKYL
Sbjct: 338 VKSLDLPKSPGGRIGIDEWLRVPSVPDVFAIGDCSGFLESTGKSVLPALAQVAERQGKYL 397
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
LLN+I +AGGG+ANS D+ELGDPFVYRHLGSMATIGRYKALVDLRQ+K S
Sbjct: 398 AGLLNKIARAGGGQANSCVDIELGDPFVYRHLGSMATIGRYKALVDLRQSKVSTEYP--- 454
Query: 243 FLSW 246
F SW
Sbjct: 455 FTSW 458
>gi|168009934|ref|XP_001757660.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691354|gb|EDQ77717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/283 (71%), Positives = 234/283 (82%), Gaps = 2/283 (0%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ G EE+ RLLHCVVVGGGPTGVEFSGELSDFI+RDV++++SHVKD+I VTLIEANEI
Sbjct: 167 IPGTDIEERKRLLHCVVVGGGPTGVEFSGELSDFILRDVQRKFSHVKDHIAVTLIEANEI 226
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFD RLR YAT QL+KSGVRL RG+VK V +KLIL+DG+EVPYGLLVWSTGVGPS
Sbjct: 227 LSSFDVRLRQYATNQLTKSGVRLKRGMVKHVLPKKLILSDGSEVPYGLLVWSTGVGPSKF 286
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
V +L KS GGRIGID LRVP+ D++AVGDC+GYLE TGKT LPALAQVAERQGKYL
Sbjct: 287 VTNLPFEKSQGGRIGIDNSLRVPAHDDIYAVGDCAGYLEGTGKTPLPALAQVAERQGKYL 346
Query: 183 FSLLNRIGKAGGGRANSA--KDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 240
+ LN++G++G GRA A + DPFVY+HLGSMAT+G YKALVDLR++ GLS+
Sbjct: 347 ATALNQLGESGHGRAGVAGSSTAPVSDPFVYKHLGSMATVGSYKALVDLRESPHGSGLSM 406
Query: 241 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
GF SWLVWRSAYLTRV+SWR RFYVA NW TTF+FGRDISR
Sbjct: 407 TGFKSWLVWRSAYLTRVISWRARFYVAFNWGTTFLFGRDISRF 449
>gi|168034940|ref|XP_001769969.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678690|gb|EDQ65145.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 525
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/282 (69%), Positives = 232/282 (82%), Gaps = 2/282 (0%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ G EEK RLLHCVVVGGGPTGVEFSGELSDFI RDV++++SH KD IHVTLIEANEI
Sbjct: 245 IPGKDPEEKKRLLHCVVVGGGPTGVEFSGELSDFIRRDVQRKFSHSKDLIHVTLIEANEI 304
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
L++FD RLR YAT Q+ +SGV+L+RG+VK V +KLILNDG EVPYGLLVWSTGVGPS
Sbjct: 305 LNTFDVRLRQYATNQMKRSGVKLMRGMVKHVLPKKLILNDGNEVPYGLLVWSTGVGPSAF 364
Query: 123 VKSLD-LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 181
+KSL+ KS GGRIG+D++LRVP+ DV+A+GDC+GY+E GK LPALAQVAERQGKY
Sbjct: 365 IKSLENFEKSKGGRIGVDDYLRVPAHDDVYALGDCAGYVERIGKPPLPALAQVAERQGKY 424
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
L LN++GK G GRA + + DPFVY+HLGSMA++GRYKALVDLRQ+ E+ G+SL
Sbjct: 425 LGESLNKLGKQGHGRAGAGTPFVV-DPFVYKHLGSMASVGRYKALVDLRQSPEATGVSLT 483
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
GF SW++WRSAYLTR +SWR R YVA NW TTF+FGRDISR
Sbjct: 484 GFKSWIIWRSAYLTRTLSWRARLYVAFNWFTTFIFGRDISRF 525
>gi|115440829|ref|NP_001044694.1| Os01g0830100 [Oryza sativa Japonica Group]
gi|56202102|dbj|BAD73631.1| putative NADH dehydrogenase (ubiquinone) [Oryza sativa Japonica
Group]
gi|56785167|dbj|BAD81843.1| putative NADH dehydrogenase (ubiquinone) [Oryza sativa Japonica
Group]
gi|113534225|dbj|BAF06608.1| Os01g0830100 [Oryza sativa Japonica Group]
gi|215697595|dbj|BAG91589.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 456
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/231 (82%), Positives = 207/231 (89%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ GISEEEK RLLHCVVVGGGPTGVEFSGELSDFI+RDV+QRYSHVKDYIHVTLIEANEI
Sbjct: 219 VPGISEEEKRRLLHCVVVGGGPTGVEFSGELSDFIIRDVKQRYSHVKDYIHVTLIEANEI 278
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFD RLR YAT QL+KSGVRLVRGIVKDV KLIL++G EVPYGLLVWSTGVGPS+
Sbjct: 279 LSSFDVRLRQYATNQLTKSGVRLVRGIVKDVQPNKLILDNGEEVPYGLLVWSTGVGPSSF 338
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
VKSL PKSPGGRIG+DEWLRVPS +DVFA+GDCSG+LESTGK VLPALAQVAERQGKYL
Sbjct: 339 VKSLPFPKSPGGRIGVDEWLRVPSARDVFAIGDCSGFLESTGKDVLPALAQVAERQGKYL 398
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 233
LLN + KAGGG AN D++LG FVY+HLGSMAT+GRYKALVDLRQ+K
Sbjct: 399 AHLLNHVMKAGGGHANCEIDVDLGPAFVYKHLGSMATVGRYKALVDLRQSK 449
>gi|296082736|emb|CBI21741.3| unnamed protein product [Vitis vinifera]
Length = 273
Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 182/247 (73%), Positives = 208/247 (84%), Gaps = 5/247 (2%)
Query: 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRH 72
RLLHCVVVGGGP GVEFSGELSDFIMR+V QR++HVK+YIHVTLIEANEILSSFDDRL+H
Sbjct: 8 RLLHCVVVGGGPIGVEFSGELSDFIMRNVHQRFAHVKNYIHVTLIEANEILSSFDDRLQH 67
Query: 73 YATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSP 132
YAT QL+KSGVRLVRGIVKDV K+ILN+GTEVPYGLLVWST VGPS+ VKS+++PKSP
Sbjct: 68 YATRQLTKSGVRLVRGIVKDVKVDKIILNNGTEVPYGLLVWSTRVGPSSFVKSIEVPKSP 127
Query: 133 GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKA 192
GGRIGIDEWLRVPS QD+FA+GDCSG+LESTGK VLPALAQVAERQGKY+ LNRIGKA
Sbjct: 128 GGRIGIDEWLRVPSAQDIFAIGDCSGFLESTGKPVLPALAQVAERQGKYIAKQLNRIGKA 187
Query: 193 GGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSA 252
GGG AN A+D E +PF+Y+HLGSM + RYKALVDL S G F+S +++
Sbjct: 188 GGGYANKARDKEFREPFIYKHLGSMTFLSRYKALVDL-----SAGQGGQRFISSRIYKLD 242
Query: 253 YLTRVVS 259
YL +S
Sbjct: 243 YLAISIS 249
>gi|228481019|gb|ACQ42209.1| putative mitochondrial type II NAD(P)H dehydrogenase [Actinidia
deliciosa]
Length = 312
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 170/207 (82%), Positives = 188/207 (90%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ G++EEEKSRLLHCVVVGGGPTGVEFSGELSDFI+RDV QRY+HVK+YIHVTLIEANEI
Sbjct: 106 VPGVTEEEKSRLLHCVVVGGGPTGVEFSGELSDFIIRDVHQRYAHVKNYIHVTLIEANEI 165
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFDDRLR YAT QL KSGVRLVRGIVKDV QK+IL+DGT VPYGLLVWSTGVGPS
Sbjct: 166 LSSFDDRLRQYATKQLVKSGVRLVRGIVKDVQPQKIILSDGTAVPYGLLVWSTGVGPSPF 225
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
VK+L+LPK+PGGRIG+DEWLRVPS QDVF+ GDCSG+LESTGK VLPALAQVAERQGKYL
Sbjct: 226 VKNLELPKAPGGRIGVDEWLRVPSAQDVFSXGDCSGFLESTGKPVLPALAQVAERQGKYL 285
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPF 209
S LNRIG AGGG AN+ KD+E+G+ F
Sbjct: 286 ASQLNRIGXAGGGHANTTKDIEVGEQF 312
>gi|222637287|gb|EEE67419.1| hypothetical protein OsJ_24758 [Oryza sativa Japonica Group]
Length = 512
Score = 313 bits (801), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 168/259 (64%), Positives = 202/259 (77%), Gaps = 27/259 (10%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
G+SEEEK RLLHCVVVGGGPTGVEFSGELSDFI RDVR+RY+HVKDY+ VTLIEANEILS
Sbjct: 125 GLSEEEKKRLLHCVVVGGGPTGVEFSGELSDFITRDVRERYAHVKDYVKVTLIEANEILS 184
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
SFD LR YAT LSK GV LVRG+VK+V +++ L+DG
Sbjct: 185 SFDVGLRQYATDHLSKYGVNLVRGVVKEVKPREIELSDGPRA------------------ 226
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
SPGGRIG+DEWLRVPSV+DVFA+GDC+G+LE TG+ VLPALAQVAER+G+YL
Sbjct: 227 ------SPGGRIGVDEWLRVPSVEDVFALGDCAGFLEGTGRAVLPALAQVAEREGRYLAR 280
Query: 185 LLNRIGKAGGGRANSA-KDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
+++RI GGRA A ELG+PFVY+H+GSMA++GRYKALVDLR+NK+++G+S+AGF
Sbjct: 281 VMSRIAAQDGGRAGRAVGSAELGEPFVYKHIGSMASVGRYKALVDLRENKDARGVSMAGF 340
Query: 244 LSWLVWRSAYLTRV--VSW 260
+SWL+WRSAYLTRV SW
Sbjct: 341 VSWLMWRSAYLTRVFGASW 359
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/138 (68%), Positives = 121/138 (87%), Gaps = 1/138 (0%)
Query: 122 LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 181
V+SL PKSPGGRIG+DEWLRVPSV+DVFA+GDC+G+LE TG+ VLPALAQVAER+G+Y
Sbjct: 372 FVRSLPFPKSPGGRIGVDEWLRVPSVEDVFALGDCAGFLEGTGRAVLPALAQVAEREGRY 431
Query: 182 LFSLLNRIGKAGGGRANSA-KDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 240
L +++RI GGRA A ELG+PFVY+H+GSMA++GRYKALVDLR+NK+++G+S+
Sbjct: 432 LARVMSRIAAQDGGRAGRAVGSAELGEPFVYKHIGSMASVGRYKALVDLRENKDARGVSM 491
Query: 241 AGFLSWLVWRSAYLTRVV 258
AGF+SWL+WRSAYLTRV+
Sbjct: 492 AGFVSWLMWRSAYLTRVL 509
>gi|395146544|gb|AFN53697.1| putative mitochondrial rotenone-insensitive NADH-ubiquinone
oxidoreductase [Linum usitatissimum]
Length = 405
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 146/177 (82%), Positives = 165/177 (93%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ G +E+EKSRLLHCVVVGGGPTGVEFSGELSDFIM+DVRQR++HVKDYI VTLIEANEI
Sbjct: 224 VPGTTEQEKSRLLHCVVVGGGPTGVEFSGELSDFIMKDVRQRHAHVKDYIRVTLIEANEI 283
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
LSSFDDRLR YAT QL+KSGVRLVRGIVKDV++ K++L++GTEVPYGLLVWSTGVGPS L
Sbjct: 284 LSSFDDRLRQYATKQLTKSGVRLVRGIVKDVEADKIVLDNGTEVPYGLLVWSTGVGPSPL 343
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
VKSLDLPKSPGGRIGIDEWLRVP+V DVFA+GDCSG++ESTGK VLPALAQ + +G
Sbjct: 344 VKSLDLPKSPGGRIGIDEWLRVPNVPDVFAIGDCSGFVESTGKPVLPALAQNLDSEG 400
>gi|156372827|ref|XP_001629237.1| predicted protein [Nematostella vectensis]
gi|156216232|gb|EDO37174.1| predicted protein [Nematostella vectensis]
Length = 438
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 127/282 (45%), Positives = 179/282 (63%), Gaps = 22/282 (7%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
G+SE EK RLLH V+VGGGPTGVEF EL DF+ +DV + Y H + + VTLIEA +IL
Sbjct: 176 GVSEAEKKRLLHFVIVGGGPTGVEFGAELYDFMKQDVTRLYPHERGEVRVTLIEARQILP 235
Query: 65 SFDDRLRHYATTQL-SKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
SFD++LR +A ++ + +L++ V V+ +IL DG+E+P GL+VWSTG+ P +
Sbjct: 236 SFDEKLRRFAEKKMRQRDQFKLLQHSVTKVNKDSIILEDGSEIPCGLVVWSTGLAPRSFT 295
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQD--VFAVGDCSGYLESTGKTVLPALAQVAERQGKY 181
SLDLPK+ ++ +D+ LRV ++ D +FA+GDCS S P AQVAERQG Y
Sbjct: 296 ASLDLPKNKAQQLLVDDHLRVKNIPDNTIFAIGDCS----SIETAPHPCTAQVAERQGLY 351
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
L N +G G+ + K PF ++++G +A +G Y+ L +L K L
Sbjct: 352 ---LANSLGLYSQGKGSDVK------PFSWKNMGMLAYLGDYQGLAELPAGK------LQ 396
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
GF SW++WRS YLT++ +WR RF V +WA TFVFGRD+S+
Sbjct: 397 GFKSWILWRSVYLTKLGNWRARFQVPFDWARTFVFGRDVSQF 438
>gi|302842542|ref|XP_002952814.1| hypothetical protein VOLCADRAFT_63040 [Volvox carteri f.
nagariensis]
gi|300261854|gb|EFJ46064.1| hypothetical protein VOLCADRAFT_63040 [Volvox carteri f.
nagariensis]
Length = 421
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/285 (46%), Positives = 182/285 (63%), Gaps = 12/285 (4%)
Query: 1 MFLAGISE---EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLI 57
+ LAGI +E RLLH V+VGGGPTGVE +GEL+DFI ++R+ Y + VTL+
Sbjct: 145 LALAGIPGRPLDEWQRLLHVVIVGGGPTGVEVAGELTDFISNELRKLYPERSRAMRVTLV 204
Query: 58 EANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV 117
EA E+L SFD LR YA +L + GV L + ++ + + + DGT +PYGL +WSTGV
Sbjct: 205 EARELLGSFDASLREYAARKLIRRGVVLRKASLRGYRTVRPV-QDGTVLPYGLCIWSTGV 263
Query: 118 GPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
GP+ SL K+ GRI +D+++R V V+A+GDC ++ LPALAQVAE+
Sbjct: 264 GPTPFTLSLPFAKTAVGRIAVDKFMR--PVPHVYALGDCCANPDNP----LPALAQVAEQ 317
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
QG+YL +LN K G + +L F YRHLGSMAT+G + A+++L + + +
Sbjct: 318 QGRYLARVLNAAAK-GPVYGETTAVQQLAPEFRYRHLGSMATVGGHSAVLEL-GDAQRRQ 375
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
LSLAGFLSW+ WRSAYLTR+ S R VA +W T +FGRD+SR
Sbjct: 376 LSLAGFLSWVAWRSAYLTRLGSLPKRLAVAFDWTVTMLFGRDLSR 420
>gi|226504146|ref|NP_001146290.1| uncharacterized protein LOC100279865 [Zea mays]
gi|219886521|gb|ACL53635.1| unknown [Zea mays]
Length = 519
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/160 (76%), Positives = 138/160 (86%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
G+S EEK RLLHCVVVGGGPTGVEFSGELSDFI RDVRQRY+HVKDY+ +TLIEANEILS
Sbjct: 278 GLSAEEKERLLHCVVVGGGPTGVEFSGELSDFITRDVRQRYAHVKDYVKITLIEANEILS 337
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
SFD LR YAT LSK GV LVRGIVK+V + ++ L+DGT VPYGLLVWSTGVGPS V+
Sbjct: 338 SFDIGLRQYATNHLSKYGVNLVRGIVKEVKATEITLSDGTRVPYGLLVWSTGVGPSEFVR 397
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTG 164
SL LPKSPGGR+G+DEWLRVP+ DVFA+GDC+G+LE T
Sbjct: 398 SLHLPKSPGGRVGVDEWLRVPTAPDVFALGDCAGFLEGTA 437
>gi|159481670|ref|XP_001698901.1| mitochondrial type-II NADH dehydrogenase [Chlamydomonas
reinhardtii]
gi|158273393|gb|EDO99183.1| mitochondrial type-II NADH dehydrogenase [Chlamydomonas
reinhardtii]
Length = 497
Score = 233 bits (593), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 136/292 (46%), Positives = 185/292 (63%), Gaps = 25/292 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ G ++E SRLLH V+VGGGPTGVE +GEL+DFI +V D + VTL+EA E+
Sbjct: 218 VPGRQQDEFSRLLHIVIVGGGPTGVEVAGELTDFISHEV------CVD-VRVTLVEAREL 270
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
L SFD LR YA +L + GV L +GIV +V ++++L DGT +PYGL +WSTGVGP+
Sbjct: 271 LGSFDASLREYAARKLIQGGVLLRKGIVHEVTPREVVLKDGTVLPYGLCIWSTGVGPTPF 330
Query: 123 VKSLDLPKSPGGRIGIDEWLR--VPS------VQDVFAVGDCSGYLESTGKTVLPALAQV 174
SL K+ GRI +D+++R PS V V+A+GD + LPALAQV
Sbjct: 331 SLSLPFAKTAVGRIAVDKYMRSDTPSTAGLAPVPHVYALGDVCANPDKP----LPALAQV 386
Query: 175 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDP----FVYRHLGSMATIGRYKALVDLR 230
AE+QG+YL +LN + + G + G P FVYR LG+MAT+G + A+++L
Sbjct: 387 AEQQGRYLARVLNELAR-GPPHVGGRQGRGGGVPQHTEFVYRQLGAMATVGGHSAVLEL- 444
Query: 231 QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
+ + LSLAGFLSW+ WRSAYLTR+ S R VA +W+ T +FGRD+SR
Sbjct: 445 GDAGRRHLSLAGFLSWVAWRSAYLTRLGSIPKRLAVAFDWSITMIFGRDLSR 496
>gi|307110626|gb|EFN58862.1| hypothetical protein CHLNCDRAFT_140737 [Chlorella variabilis]
Length = 520
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 150/323 (46%), Positives = 194/323 (60%), Gaps = 56/323 (17%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ G S ++ RLLH VVVGGGPTGVEF+GEL+DFI RD+R+ + +TLIEANE+
Sbjct: 210 IPGRSPLDRDRLLHVVVVGGGPTGVEFAGELADFINRDLRKIDPSRARDMRITLIEANEL 269
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
L SFD RLR Y +L K GV+LV+G+VK+V +L L DG+ +P+GL VWSTGVGP+
Sbjct: 270 LGSFDARLREYTARKLVKEGVQLVKGVVKEVTEGELELQDGSRIPFGLCVWSTGVGPTPF 329
Query: 123 VKSLDLPKSPGGRIGIDEWLRV---PSVQ------------------------------- 148
SL K+P GR+ ID+ LRV P +Q
Sbjct: 330 TVSLPFAKTPRGRLAIDDKLRVLMAPRLQPDGHVQADADRGPGPQQVSEVHMRQDEEDAS 389
Query: 149 ---------DVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANS 199
+V+A+GDC + T LPALAQVAE+QGKYL LN +AG A
Sbjct: 390 LHKDWKPVGNVYALGDCC----ANPDTPLPALAQVAEQQGKYLARCLNE--EAGKLEAPQ 443
Query: 200 AKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVS 259
PFVY+HLGSMA+IG A+++L + K+ K LS AGF SW+ WRSAYLTR+ +
Sbjct: 444 LP------PFVYKHLGSMASIGGASAVIELGEAKQRK-LSWAGFSSWVAWRSAYLTRLGT 496
Query: 260 WRNRFYVAVNWATTFVFGRDISR 282
++R YVA +WA T +FGRDISR
Sbjct: 497 MKHRMYVAGDWALTLLFGRDISR 519
>gi|395146524|gb|AFN53679.1| mitochondrial putative rotenone-insensitive NADH-ubiquinone
oxidoreductase [Linum usitatissimum]
Length = 563
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/171 (73%), Positives = 142/171 (83%), Gaps = 22/171 (12%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
+ G +E+EKSRLLHCVVVGGGPTGVEFSGELSDFIM+DVR+R++HVKDYI VTLIE
Sbjct: 377 IPGTTEQEKSRLLHCVVVGGGPTGVEFSGELSDFIMKDVRKRHAHVKDYIRVTLIE---- 432
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
SGVRLVRGIVKDV+ K+IL++GTEVPYGLLVWSTGVGPS+L
Sbjct: 433 ------------------SGVRLVRGIVKDVEPHKIILDNGTEVPYGLLVWSTGVGPSSL 474
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
VKSLDLPKSPGGRIGIDEWLRVP++ DVFA+GDCSG++ESTGK VLPALAQ
Sbjct: 475 VKSLDLPKSPGGRIGIDEWLRVPNMPDVFAIGDCSGFVESTGKQVLPALAQ 525
>gi|449685240|ref|XP_002156851.2| PREDICTED: probable NADH dehydrogenase-like [Hydra magnipapillata]
Length = 422
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/279 (44%), Positives = 174/279 (62%), Gaps = 18/279 (6%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS 65
++EEE+ LLH V+VGGGPTG+EF EL DFI DV + + K+ +HVTL+E + IL S
Sbjct: 161 VNEEERLSLLHFVIVGGGPTGIEFGAELYDFITHDVARLFPGEKNDVHVTLVEGDSILPS 220
Query: 66 FDDRLRHYATTQLS-KSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
FD RLR +A +++ + L++ V +V + L G + L+VWSTG+GP ++
Sbjct: 221 FDQRLRKFAERKITQRENFHLIKDFVVEVGENYVKLKSGKVLLTKLVVWSTGLGPRKFIE 280
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
SLDLPK ++ +D+ LRV +FA+GDCS Y++ + LP+ AQVAERQG+Y+
Sbjct: 281 SLDLPKGKSKQLKVDDHLRVVGYDSIFAIGDCS-YIDGSP---LPSTAQVAERQGRYVAQ 336
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
L+ + NS D + PF++ + G +A IG YKA+ DL +K + GF
Sbjct: 337 YLSLL------ETNSKTDSK---PFMWSNAGMLAYIGGYKAVADL----PTKAGKITGFK 383
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
SWL+WRS YLTR+ SWRNR V +WA TF FGRDISR
Sbjct: 384 SWLIWRSVYLTRLGSWRNRMQVPFDWARTFFFGRDISRF 422
>gi|196011808|ref|XP_002115767.1| hypothetical protein TRIADDRAFT_2088 [Trichoplax adhaerens]
gi|190581543|gb|EDV21619.1| hypothetical protein TRIADDRAFT_2088, partial [Trichoplax
adhaerens]
Length = 407
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 124/281 (44%), Positives = 173/281 (61%), Gaps = 26/281 (9%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS 65
I +E++ RLLH V+VGGGPTGVEF EL DFI++DV + + +++ +HVTL+E+ EIL S
Sbjct: 150 IKDEDRKRLLHTVIVGGGPTGVEFGAELYDFIIQDVAKIFPSLQNMVHVTLVESREILPS 209
Query: 66 FDDRLRHYATTQLSK-SGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
FDDRLR +A ++ K ++L+RG V +V+ + L DGT + GL VWS G+ P L
Sbjct: 210 FDDRLRAHAEKKIGKRERMKLLRGTVAEVNHDGIKLTDGTNIQCGLTVWSAGLAPRELTT 269
Query: 125 SLDLPKSPGGRIGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
LDLPK+ G++ +D +L V+ V+A+GDCS YL+ST LP AQVAER+GKYL
Sbjct: 270 RLDLPKTKQGQVIVDNYLHTIKQDVEGVYALGDCS-YLQSTP---LPCTAQVAEREGKYL 325
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
+L+ A PF ++ LG +A +G +L DL K G
Sbjct: 326 AKVLSSSQSA-------------PKPFFFKSLGMLAYVGEQDSLTDLPYVK------WQG 366
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
F SW++W AY TR+ SWR R V ++W TF++GRDISR
Sbjct: 367 FKSWILWHLAYTTRLGSWRLRMQVPIDWFKTFIYGRDISRF 407
>gi|384250625|gb|EIE24104.1| mitochondrial type-II NADH dehydrogenase [Coccomyxa subellipsoidea
C-169]
Length = 493
Score = 223 bits (567), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 131/284 (46%), Positives = 175/284 (61%), Gaps = 25/284 (8%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSF 66
+++E+SRLL VVVGGGPTGVEF+GELS FI R I ++L+E ++L SF
Sbjct: 224 TQKERSRLLQIVVVGGGPTGVEFAGELSSFISTRARD--------IRISLVEGAQLLGSF 275
Query: 67 DDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
D RLR YA +L G+ L++ +VK+V +LIL +G +PYGL VWSTGVGP+ SL
Sbjct: 276 DVRLREYAARKLHNQGIHLIKVMVKEVKETELILQNGDVIPYGLCVWSTGVGPTDFTTSL 335
Query: 127 DLPKSPGGRIGIDEWLRV---------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
K+ GRI +D+ L + ++FA+GDC E LPALAQVAE+
Sbjct: 336 PFAKTARGRIAVDDCLHAGDKSSNDDFEPLHNIFALGDCCANKEH----ALPALAQVAEQ 391
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
QG YL LN KA G+ + + PF Y HLGSMA +G+ A+V+L + + +G
Sbjct: 392 QGMYLAKQLNAAAKARVGKEEAPQ----WKPFEYHHLGSMALVGKGSAIVELGDHSKGRG 447
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
LSL GF SWL WRSAYLTR+ + RNR YV ++W +FGRD+S
Sbjct: 448 LSLTGFKSWLAWRSAYLTRLGNVRNRLYVMLDWTIALLFGRDVS 491
>gi|440793246|gb|ELR14434.1| NADH dehydrogenase, putative [Acanthamoeba castellanii str. Neff]
Length = 473
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 120/281 (42%), Positives = 172/281 (61%), Gaps = 25/281 (8%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSS 65
+E E+SRLLH V+VGGGPT VEFS EL DF+ +DV + Y ++ + +TLIEA + +LS+
Sbjct: 214 TEAERSRLLHFVIVGGGPTSVEFSAELHDFLRKDVHKIYPDLEKQVQITLIEAGKTLLST 273
Query: 66 FDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
FD RL Y K + + + VK V +++L+DG +P+GL VWSTG+ P +K
Sbjct: 274 FDQRLSDYTMRTFRKRNIDVRTSVSVKQVKRHEMVLSDGAVIPFGLGVWSTGLSPIPFIK 333
Query: 125 SLDLPKSPGGRIGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
L PK GR+ +DE+L V P V+ V+AVGDC+ + + LPA AQ AE++GKYL
Sbjct: 334 GLPFPKDRSGRLLVDEYLHVKAPGVEGVYAVGDCAAFETNP----LPATAQGAEQEGKYL 389
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
LN KA G E F Y H G +A +G Y+AL+D S + +G
Sbjct: 390 AQALN--AKARG---------EEPKKFQYHHKGMLAYVGGYRALID------SPLIKRSG 432
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
FL+W++W +AY+T++VS +N+ + + W +FVFGRDISR
Sbjct: 433 FLTWIMWNAAYITKLVSIKNKMMIPMYWFKSFVFGRDISRF 473
>gi|356503032|ref|XP_003520316.1| PREDICTED: LOW QUALITY PROTEIN: probable NADH dehydrogenase-like,
partial [Glycine max]
Length = 340
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 106/165 (64%), Positives = 131/165 (79%), Gaps = 3/165 (1%)
Query: 4 AGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL 63
GIS+EEK LLHCVV+ GGPT VEFSGELSDFIMR V++ Y HVKDYIHVTLIEANEIL
Sbjct: 115 TGISKEEKKCLLHCVVIRGGPTRVEFSGELSDFIMRHVQEHYIHVKDYIHVTLIEANEIL 174
Query: 64 SSFDDRLRHYATTQLSK---SGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120
S F+ + YA L+K S VRL+ G+VK V +K+IL++G +VPYGLLVWSTGVG S
Sbjct: 175 SCFNVSVXQYAIKHLTKXCNSMVRLMWGVVKMVHLKKIILSEGKKVPYGLLVWSTGVGAS 234
Query: 121 TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGK 165
VK++DLPKS GG IG+D+WL VPS++D F++GDC+G+LE G+
Sbjct: 235 XFVKTIDLPKSQGGIIGVDDWLHVPSMEDAFSLGDCAGFLEHIGR 279
>gi|320163103|gb|EFW40002.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 457
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 173/281 (61%), Gaps = 20/281 (7%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
G+S EE+ RLL V+ GGG TGVEF EL DF+++D+ + Y H++D+I + L+E N+IL
Sbjct: 195 GVSAEERQRLLTVVIAGGGATGVEFGAELHDFLVQDLPKLYPHLQDHIRIVLVEPNDILG 254
Query: 65 SFDDRLRHYATTQL-SKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+FD RLR +A ++ + + +VR + DV + + DGT P+G+LVW TG+ PS L
Sbjct: 255 AFDSRLRTFAERKIRQRRDMTIVRKFIVDVTEKNVHFKDGTTHPFGVLVWVTGLAPSPLA 314
Query: 124 KSL-DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
SL PK+ + +D+ LRV + +V+A+GDC+ + LP AQVAERQG+YL
Sbjct: 315 VSLSQFPKNKQHQFVVDQQLRVTGIPNVYALGDCAAMTPA-----LPCTAQVAERQGRYL 369
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
S+L+ +G A++ PFV++ +G MA +G + A+ DL K L+G
Sbjct: 370 ASVLSNLGSDSAAVASAP-------PFVFKSMGMMAYVGDHDAISDLPVTK------LSG 416
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
++W +W SAYLTR+ +WR R V +W + +FGRDISR
Sbjct: 417 IMAWWLWFSAYLTRLGAWRLRLQVPFDWFRSRLFGRDISRF 457
>gi|154346482|ref|XP_001569178.1| putative NADH dehydrogenase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066520|emb|CAM44317.1| putative NADH dehydrogenase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 527
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 121/285 (42%), Positives = 169/285 (59%), Gaps = 21/285 (7%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
L S EE RLLH VVVGGGPTG+EF+ L+DF D++ + + + VT++EA E+
Sbjct: 169 LPTTSIEEAKRLLHTVVVGGGPTGIEFAANLADFFREDIKNVNTSLLPHCKVTVLEAGEV 228
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
L SFD LR Y +L + GV + + V +V +++ G +P GL+VWSTGVG +
Sbjct: 229 LGSFDATLRRYGQLRLKQLGVEIRKTAVVNVTDKQVFTKSGEVLPTGLVVWSTGVGSGPI 288
Query: 123 VKSLDLPKSPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 178
K+L K+ GRI ID+ LRV + +VFA GDC+ ++ + LP LA VA RQ
Sbjct: 289 TKALKCDKTSHGRISIDDHLRVLRDSKPIPNVFAAGDCA----ASNEKPLPTLAAVASRQ 344
Query: 179 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 238
G+Y+ +N N K ++ PFVYR LGSMA+IG + A+V L E L
Sbjct: 345 GRYIGKEIN----------NLLKGKQMTKPFVYRSLGSMASIGSHSAIVSL---GEKLKL 391
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L G+ + VW+SAYLT + S R++ YV VNWA + +FGRDI+ I
Sbjct: 392 DLNGYAALWVWKSAYLTILGSIRSKLYVIVNWAGSQIFGRDITYI 436
>gi|198427647|ref|XP_002122465.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 472
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 123/284 (43%), Positives = 168/284 (59%), Gaps = 28/284 (9%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEANEIL 63
G E + +LLH V+VGGGPTGVEF EL DF+ DV + YS ++ + VTLIEAN+IL
Sbjct: 212 GSDEATQDQLLHIVIVGGGPTGVEFGAELYDFLREDVARLYSTGLQQKVKVTLIEANKIL 271
Query: 64 SSFDDRLRHYATTQLSK-SGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
SFD RLR YA ++ K +++G+V V + L DGT++P GL+VWSTG+ P
Sbjct: 272 GSFDKRLREYAEKKIIKRKQFEILQGVVAKVTRNNVHLKDGTKIPCGLVVWSTGLSPRPF 331
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQD---VFAVGDCSGYLESTGKTVLPALAQVAERQG 179
V+ L K G I + L+VP V D VF++GDC+ LPA AQVAER+G
Sbjct: 332 VQQLTFRKDKYGHIMTNRKLQVPDVDDEHSVFSLGDCA----DIEGMPLPATAQVAERKG 387
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
K+L LN ++++D F + +LG +A +G Y L D + K
Sbjct: 388 KWLAEYLN---------GDTSED------FQFSNLGMLAYVGGYSGLSDFK----PKLFK 428
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L GF +W VWRSAYLT++ SW++RF V ++W T +FGRDISR
Sbjct: 429 LTGFHAWFVWRSAYLTKLGSWKSRFQVPMDWLKTLIFGRDISRF 472
>gi|340371335|ref|XP_003384201.1| PREDICTED: probable NADH dehydrogenase-like [Amphimedon
queenslandica]
Length = 437
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/279 (43%), Positives = 173/279 (62%), Gaps = 23/279 (8%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS 65
+SEEEK RLLH VVVGGGPTGVEFS E DF+ +D+ + Y + +H+TLIEANEILSS
Sbjct: 181 VSEEEKRRLLHFVVVGGGPTGVEFSAEFYDFLQQDLERLYPDERSTVHITLIEANEILSS 240
Query: 66 FDDRLRHYATTQLSK-SGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
FD +LR Y + K +++++ V +V + L+DG+ +P G++VWS G+ P + V
Sbjct: 241 FDTKLRSYTEKIIKKRERMQILKASVTEVTDTGITLSDGSVMPCGMVVWSAGLAPRSFVN 300
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
L++ K+ G+I +DE+L++PS+ V+A+GDC+ + + +P AQVAE+QG+YL
Sbjct: 301 DLNVDKNSRGQILVDEYLKLPSLDSVYAIGDCASVIGND----MPCTAQVAEKQGRYLAK 356
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
L+R K PFV++ G +A IG Y+AL D K G+
Sbjct: 357 ALSR------------KASTPPPPFVFKQTGMLAYIGDYRALADTSVGKSQ------GYA 398
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
SW++WRSAY T++ SWR R V ++W TF FGRD SR
Sbjct: 399 SWILWRSAYSTKLGSWRLRMQVPMDWMKTFFFGRDTSRF 437
>gi|401420816|ref|XP_003874897.1| putative NADH dehydrogenase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491133|emb|CBZ26398.1| putative NADH dehydrogenase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 524
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 118/285 (41%), Positives = 166/285 (58%), Gaps = 21/285 (7%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
L S E RLLH VVVGGGPTG+EF+ L++F D++ + + Y VT++EA E+
Sbjct: 169 LPTTSIAEAKRLLHTVVVGGGPTGIEFAANLAEFFREDIKNVNTSLLPYCKVTVLEAGEV 228
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
L SFD LR Y +L++ GV + + V V +++ G +P GL+VWSTGVG +
Sbjct: 229 LGSFDTALRRYGQLRLNQLGVEIRKTAVVGVTDEEVFTKSGEVLPTGLVVWSTGVGSCPV 288
Query: 123 VKSLDLPKSPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 178
K+L+ K+ GRI ID+ LRV + +VFA GDC+ ++ + LP LA VA RQ
Sbjct: 289 TKALNCDKTNRGRISIDDHLRVLRDGKPILNVFAAGDCA----ASNERPLPTLAAVASRQ 344
Query: 179 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 238
G+Y+ +N N K ++ PF YR LGSMA+IG A+V L +
Sbjct: 345 GRYIGKEMN----------NLLKGKQMSKPFAYRSLGSMASIGNRSAIVSLGNKFK---F 391
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L GF + VW+SAYLT + S R++ YV VNWA + +FGRDI+ I
Sbjct: 392 DLNGFTALWVWKSAYLTILGSIRSKLYVIVNWAGSQIFGRDITYI 436
>gi|157877617|ref|XP_001687125.1| putative NADH dehydrogenase [Leishmania major strain Friedlin]
gi|68130200|emb|CAJ09511.1| putative NADH dehydrogenase [Leishmania major strain Friedlin]
Length = 527
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 121/285 (42%), Positives = 164/285 (57%), Gaps = 21/285 (7%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
L S E RLLH VVVGGGPTG+EF+ L++F D++ + + Y VT++EA E+
Sbjct: 169 LPTTSIAEAKRLLHTVVVGGGPTGIEFAANLAEFFREDIKNVNTSLLPYCKVTVLEAGEV 228
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
L SFD+ LR Y +L++ GV + + V V +++ G +P GL+VWSTGVG +
Sbjct: 229 LGSFDNALRRYGQLRLNQLGVEIRKTAVVGVTDEEVFTKSGEVLPTGLVVWSTGVGSGPV 288
Query: 123 VKSLDLPKSPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 178
K+L K+ GRI ID+ LRV + +VFA GDC+ E LP LA VA RQ
Sbjct: 289 TKALKCDKTNRGRISIDDHLRVLRDGKPIPNVFAAGDCAANNERP----LPTLAAVASRQ 344
Query: 179 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 238
G+Y IGK N K ++ PFVYR LGSMA+IG A+V L +
Sbjct: 345 GRY-------IGKETN---NLLKGKQMSKPFVYRSLGSMASIGNRTAIVSL---GDKFKF 391
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L G + VW+SAYLT + S R++ YV VNWA + +FGRDI+ I
Sbjct: 392 DLNGCAALWVWKSAYLTILGSIRSKLYVIVNWAGSQIFGRDITYI 436
>gi|146104827|ref|XP_001469921.1| putative NADH dehydrogenase [Leishmania infantum JPCM5]
gi|134074291|emb|CAM73037.1| putative NADH dehydrogenase [Leishmania infantum JPCM5]
Length = 527
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 118/285 (41%), Positives = 165/285 (57%), Gaps = 21/285 (7%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
L S E RLLH VVVGGGPTG+EF+ L++F D++ + + Y VT++EA E+
Sbjct: 169 LPTTSIAEAKRLLHTVVVGGGPTGIEFAANLAEFFREDIKNVNTSLLPYCKVTVLEAGEV 228
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
L SFD LR Y +L++ GV + + V V +++ G +P GL+VWSTGVG +
Sbjct: 229 LGSFDTALRRYGQLRLNQLGVEIRKTAVVGVTDEEVFTKSGEVLPTGLVVWSTGVGSGPV 288
Query: 123 VKSLDLPKSPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 178
K+L K+ GRI ID+ LRV + +VFA GDC+ ++ + LP LA VA RQ
Sbjct: 289 TKALKCDKTNRGRISIDDHLRVLRDGKPIPNVFAAGDCA----ASNERPLPTLAAVASRQ 344
Query: 179 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 238
G+Y+ +N N K ++ PFVYR LGSMA+IG A+V L +
Sbjct: 345 GRYIGKEMN----------NLLKGKQMSRPFVYRSLGSMASIGNRSAIVSL---GDKFKF 391
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L G + VW+SAYLT + S R++ YV VNWA + +FGRDI+ I
Sbjct: 392 DLNGCAALWVWKSAYLTILGSIRSKLYVIVNWAGSQIFGRDITYI 436
>gi|398025028|ref|XP_003865675.1| NADH dehydrogenase, putative [Leishmania donovani]
gi|322503912|emb|CBZ38998.1| NADH dehydrogenase, putative [Leishmania donovani]
Length = 527
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 118/285 (41%), Positives = 165/285 (57%), Gaps = 21/285 (7%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
L S E RLLH VVVGGGPTG+EF+ L++F D++ + + Y VT++EA E+
Sbjct: 169 LPTTSIAEAKRLLHTVVVGGGPTGIEFAANLAEFFREDIKNVNTSLLPYCKVTVLEAGEV 228
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
L SFD LR Y +L++ GV + + V V +++ G +P GL+VWSTGVG +
Sbjct: 229 LGSFDTALRRYGQLRLNQLGVEIRKTAVVGVTDEEVFTKSGEVLPTGLVVWSTGVGSGPV 288
Query: 123 VKSLDLPKSPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 178
K+L K+ GRI ID+ LRV + +VFA GDC+ ++ + LP LA VA RQ
Sbjct: 289 TKALKCDKTNRGRISIDDHLRVLRDGKPIPNVFAAGDCA----ASNERPLPTLAAVASRQ 344
Query: 179 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 238
G+Y+ +N N K ++ PFVYR LGSMA+IG A+V L +
Sbjct: 345 GRYIGKEMN----------NLLKGKQMSRPFVYRSLGSMASIGNRSAIVSL---GDKFKF 391
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L G + VW+SAYLT + S R++ YV VNWA + +FGRDI+ I
Sbjct: 392 DLNGCAALWVWKSAYLTILGSIRSKLYVIVNWAGSQIFGRDITYI 436
>gi|405968830|gb|EKC33859.1| Putative NADH dehydrogenase [Crassostrea gigas]
Length = 418
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 168/281 (59%), Gaps = 43/281 (15%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
G+SE E+ +LL+ V+VGGGPTGVEF EL D+I +DV + Y KD +HVTL+E+N+ILS
Sbjct: 178 GLSESERKQLLNFVIVGGGPTGVEFGAELYDWIEQDVARVYHQRKDQVHVTLVESNQILS 237
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
SFD+ LR YA + V S + L++G ++P GL+VWSTG+ P+ VK
Sbjct: 238 SFDESLRKYA----------------EKVTSDCVKLSNGEDLPCGLVVWSTGLSPTQFVK 281
Query: 125 SLDLPKSPGGRIGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
SL + K+ G+I D+ L V +V+A+GDC+ ++ LP +AQVAERQG+YL
Sbjct: 282 SLGVDKNRNGQILTDKNLHVIGDPTNNVYALGDCADIRDNP----LPCIAQVAERQGEYL 337
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
+L KD + F ++ G +A IGRY+ + D+ + + + G
Sbjct: 338 ANLF------------CGKDEK---EFTFQSKGMLAYIGRYQGVSDIPK------IKMQG 376
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
SW +WRSAYLT++ SWR R V ++W T +FGRDISR
Sbjct: 377 ISSWFLWRSAYLTKLGSWRLRMQVPMDWTKTILFGRDISRF 417
>gi|348674320|gb|EGZ14139.1| hypothetical protein PHYSODRAFT_316979 [Phytophthora sojae]
Length = 481
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/295 (38%), Positives = 175/295 (59%), Gaps = 33/295 (11%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
G++ EE+ RLLH VVVGGGPTG+EF EL D +++D+R Y V Y+ VTL+++ EILS
Sbjct: 204 GVTPEERERLLHFVVVGGGPTGIEFCAELYDLVLQDLRHMYPDVSKYLGVTLLDSGEILS 263
Query: 65 SFDDRLRHYATTQL-SKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
FD +LR A +++ S+S +R+++ +V + + L G ++P GL+VW+ GVGP+ L
Sbjct: 264 GFDKQLRTVALSKIESRSSMRIIKKNCIEVTADGVTLEGGEKLPAGLVVWTAGVGPNALT 323
Query: 124 KSLDL-PKSPGGRIGIDEWLRV--------------PSVQDVFAVGDCSGYLESTGKTVL 168
KSL + KS G I +++ +V P +VF++GDC+ L+ L
Sbjct: 324 KSLTVFEKSRRGNILTNQYCQVLGAAEVETEAPLGMPRRSNVFSIGDCAEILDYP----L 379
Query: 169 PALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVD 228
PA AQ A+ Q YL +LL G A AK P+ +R G +A +G Y+ L +
Sbjct: 380 PATAQKAQTQADYLTALLR------GKNAAPAK------PYTFRSKGMVAYLGSYQGLFE 427
Query: 229 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
R +++K ++L G+ +W +WRSAYLT++ SWR R V ++W + GRD+SR
Sbjct: 428 ARPREDNK-ITLTGWQAWFLWRSAYLTKLGSWRLRLQVPLDWLKAILVGRDVSRF 481
>gi|281204519|gb|EFA78714.1| putative NADH dehydrogenase [Polysphondylium pallidum PN500]
Length = 461
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 166/279 (59%), Gaps = 25/279 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEANE 61
L ++ E+ +LL VV GGGPTGVEF GEL+D + D+ + + +V + + +TL+EA++
Sbjct: 201 LPDVTPAERRKLLSFVVCGGGPTGVEFCGELNDLVSEDISRWFPNVPMNEVKITLLEASK 260
Query: 62 -ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
ILS+FD L A SGV + VK+V +K+IL+DGTE+PYG+LVWSTGV P
Sbjct: 261 SILSAFDQNLVKKALENFKASGVDVRTNSPVKEVHEEKVILSDGTEIPYGMLVWSTGVAP 320
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+ SL PK GR+ +D++L + +++FA GDCS + +T LPA AQVA++QG
Sbjct: 321 QKFINSLPFPKDKQGRLQVDQYLCLAGQKNIFAFGDCS----NVNETNLPATAQVAQQQG 376
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
YL N NS K++E PFVY + G +A IGR +L ++ +
Sbjct: 377 IYLAEQFN----------NSIKELE-SKPFVYHYFGILAYIGRKSSLF------QTNAVQ 419
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
+G +W+ WRSAYLTR+ S R+ F + +N ++ R
Sbjct: 420 ASGLWAWIAWRSAYLTRLGSLRS-FNMELNKKQLYMLTR 457
>gi|443726586|gb|ELU13705.1| hypothetical protein CAPTEDRAFT_169172 [Capitella teleta]
Length = 438
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/282 (41%), Positives = 164/282 (58%), Gaps = 26/282 (9%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY-SHVKDYIHVTLIEANEILS 64
++EEEK RLLH V+VGGGPTGVEF EL DF +DV + + + VTL+E+N+IL
Sbjct: 179 LAEEEKKRLLHTVIVGGGPTGVEFGAELYDFFEQDVSRLFGKDEQTKSRVTLVESNKILG 238
Query: 65 SFDDRLRHYATTQLSKSG-VRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
SFD RL+ YA ++S+ L++ V +V + + L DG +P GL+VWSTG+ P
Sbjct: 239 SFDGRLQKYAEKKISQRDRFTLLKSSVTEVGADYVKLQDGEVLPCGLVVWSTGLSPRWFT 298
Query: 124 KSLDLPKSPGGRIGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 181
+ L + K+ G+I D LRV S + VFA+GDC+ E LP AQVAERQG+Y
Sbjct: 299 QQLAVTKNERGQILTDAHLRVKDASPETVFAIGDCADIEEQP----LPCTAQVAERQGRY 354
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
L L + +++ F ++ G +A IG Y+ L D + L +
Sbjct: 355 LAQRL------------AIDNVQKRTSFEFKSSGMLAYIGGYEGLTD------TPDLKVQ 396
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
GF SW +WRSAYLT++ SWR R V ++W T +FGRD+SR
Sbjct: 397 GFPSWFLWRSAYLTQLGSWRLRMQVPLDWTKTILFGRDVSRF 438
>gi|407410040|gb|EKF32628.1| NADH dehydrogenase, putative [Trypanosoma cruzi marinkellei]
Length = 512
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/279 (44%), Positives = 171/279 (61%), Gaps = 21/279 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDD 68
EE RLLH VVVGGGPTGVEF+ ++DF DVR+ + ++ VT++EA E+ FD
Sbjct: 174 EEAKRLLHVVVVGGGPTGVEFAATVADFFRDDVRKINHKLVEFCKVTVLEAGEVFGMFDL 233
Query: 69 RLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 128
R+R++ +L GVR+V+G V V+ ++++ DG +P GL+VWSTGVGPS+L K LD+
Sbjct: 234 RVRNWGKRRLDALGVRIVKGAVVAVNKKEVVTKDGIVIPTGLVVWSTGVGPSSLTKDLDV 293
Query: 129 PKSPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
++ GRI ID+ LRV + DVFA+GDC+ + K LP LA VA RQG +L
Sbjct: 294 DRTSRGRISIDDHLRVLRKGAPMPDVFAIGDCA----ANEKLPLPTLAAVASRQGVFLAK 349
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
+N G ++ ME PF YR LGSM ++G ALV+L N SK G
Sbjct: 350 KVN-------GELSNKPVME---PFEYRSLGSMVSLGDNAALVEL--NVPSK-FDFVGLK 396
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ WRSAYL+ + SWRN+ YV VNW + +FGRD + I
Sbjct: 397 ALFFWRSAYLSILGSWRNKLYVLVNWVGSAIFGRDTTFI 435
>gi|340057621|emb|CCC51967.1| putative NADH dehydrogenase [Trypanosoma vivax Y486]
Length = 471
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 170/281 (60%), Gaps = 21/281 (7%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSF 66
+E E RLLH VVVGGGPTGVEF+ L+DF+ D+++ + Y VT++EA E+ S+F
Sbjct: 172 TESEMKRLLHTVVVGGGPTGVEFAASLADFVRDDLKKISPDLVPYAQVTVLEAGEVFSNF 231
Query: 67 DDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
D R+R + +L GVR+V+G V V+ +++ DG P GL+VWSTGVGPS L K L
Sbjct: 232 DLRVRAWGKRRLESMGVRIVKGSVVCVEKDEVVTKDGEHFPCGLVVWSTGVGPSQLTKDL 291
Query: 127 DLPKSPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
D+ ++ GGRI I+E L+V + DV+A+GDC+ ++ LP LA VA RQG YL
Sbjct: 292 DVDRAAGGRIAINEQLQVLRGGKPIPDVYALGDCAANVQCP----LPTLAAVASRQGTYL 347
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
+ N + + P+ Y LGSMA++G A+V+L ++ + + G
Sbjct: 348 ANKFNL----------ELANKKFDAPYRYESLGSMASLGNSGAVVELNTRRK---VDIVG 394
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ WRSAYL+ + SWRN+ YV VNW + +FGRD++ I
Sbjct: 395 LKALYFWRSAYLSILGSWRNKLYVVVNWVGSALFGRDVTFI 435
>gi|407849488|gb|EKG04215.1| NADH dehydrogenase, putative [Trypanosoma cruzi]
Length = 512
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 124/279 (44%), Positives = 169/279 (60%), Gaps = 21/279 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDD 68
EE RLLH VVVGGGPTGVEF+ ++DF DVR+ + ++ VT++EA E+ FD
Sbjct: 174 EEAKRLLHVVVVGGGPTGVEFAATVADFFRDDVRKINHKLVEFCKVTVLEAGEVFGMFDL 233
Query: 69 RLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 128
R+R++ +L GVR+V+G V V++++++ DG + GL+VWSTGVGPS+L K LD+
Sbjct: 234 RVRNWGKRRLDALGVRIVKGAVVTVNNKEVVTKDGIVIRTGLVVWSTGVGPSSLTKDLDV 293
Query: 129 PKSPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
++ GRI ID+ LRV + DVFA+GDC+ + K LP LA VA RQG YL
Sbjct: 294 DRTSRGRISIDDHLRVLRKGAPISDVFAIGDCA----ANEKLPLPTLAAVASRQGAYL-- 347
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
K G +N + PF YR LGSM ++G ALV+L N SK G
Sbjct: 348 ----AKKVNGELSNKP----IMAPFEYRSLGSMVSLGDNAALVEL--NVPSK-FDFVGLK 396
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ WRSAYL+ + SWRN+ YV VNW + +FGRD + I
Sbjct: 397 ALFFWRSAYLSILGSWRNKLYVLVNWVGSAIFGRDTTFI 435
>gi|71422638|ref|XP_812197.1| NADH dehydrogenase [Trypanosoma cruzi strain CL Brener]
gi|70876950|gb|EAN90346.1| NADH dehydrogenase, putative [Trypanosoma cruzi]
Length = 512
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/279 (44%), Positives = 169/279 (60%), Gaps = 21/279 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDD 68
EE RLLH VVVGGGPTGVEF+ ++DF DVR+ + ++ VT++EA E+ FD
Sbjct: 174 EEAKRLLHVVVVGGGPTGVEFAATVADFFRDDVRKINHKLVEFCKVTVLEAGEVFGMFDL 233
Query: 69 RLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 128
R+R++ +L GVR+V+G V V++++++ DG + GL+VWSTGVGPS+L K LD+
Sbjct: 234 RVRNWGKRRLDALGVRIVKGAVVAVNNKEVVTKDGIVIRTGLVVWSTGVGPSSLTKDLDV 293
Query: 129 PKSPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
++ GRI ID+ LRV + DVFA+GDC+ + K LP LA VA RQG YL
Sbjct: 294 DRTSRGRISIDDHLRVLRKGAPIPDVFAIGDCA----ANEKLPLPTLAAVASRQGAYLAK 349
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
K G +N + PF YR LGSM ++G A+V+L N SK G
Sbjct: 350 ------KVNGELSNKP----IMAPFEYRSLGSMVSLGDNAAIVEL--NVPSK-FDFVGLK 396
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ WRSAYL+ + SWRN+ YV VNW + VFGRD + I
Sbjct: 397 ALFFWRSAYLSILGSWRNKLYVLVNWVGSAVFGRDTTFI 435
>gi|328874155|gb|EGG22521.1| putative NADH dehydrogenase [Dictyostelium fasciculatum]
Length = 490
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 171/313 (54%), Gaps = 53/313 (16%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-N 60
L EE+ RLL ++VG GPTGVEF+ EL+D ++ D+ + + +V + I++T++EA N
Sbjct: 195 LPDCKPEERKRLLSTIIVGAGPTGVEFAAELNDLVIEDIAKLFPNVPCNEINITILEASN 254
Query: 61 EILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
ILS+FD +L A + +G+ + IVK+V S ++IL G +P+GLLVWSTG+G
Sbjct: 255 RILSAFDSKLVDTAVKRFRTTGIDVRTNTIVKEVLSDEVILTSGERIPFGLLVWSTGIGS 314
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSV-------------------------------Q 148
L + K GRI +D++LRV ++ +
Sbjct: 315 HPFTDRLPMEKDKHGRIIVDDFLRVKNIFQNNNNNKTIESTSTTSTITTTATTKQQQQQE 374
Query: 149 DVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDP 208
++++ GDC+ LPA AQVA+++G YL N N A++ EL P
Sbjct: 375 NIYSFGDCAS--PQGNNNNLPATAQVAQQEGYYLAQQFN----------NRAENKEL-QP 421
Query: 209 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 268
FV+ LG MA IGR +L ++ + +GF +W+ WRSAYLTR+ S R++ V
Sbjct: 422 FVFNFLGIMAYIGRMSSLF------QTNSVHASGFTAWVTWRSAYLTRLGSIRSKLQVPF 475
Query: 269 NWATTFVFGRDIS 281
+WA TF+FGRDIS
Sbjct: 476 DWARTFIFGRDIS 488
>gi|452821315|gb|EME28347.1| NADH dehydrogenase isoform 1 [Galdieria sulphuraria]
Length = 548
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 168/297 (56%), Gaps = 25/297 (8%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILS 64
IS+EEK RLL VVVGGGPTG EF+ EL DF+++D+++ Y + + V L+++ + IL+
Sbjct: 258 ISKEEKCRLLSFVVVGGGPTGCEFAAELHDFLVQDLKKYYPKLFGDVQVLLLQSGDSILT 317
Query: 65 SFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
FD L+ A +S ++++ + V +V S + L DG E+PYGL VW+ G G L
Sbjct: 318 QFDRTLQEKALENFRQSNIQVITKARVTEVTSTHIRLVDGKEIPYGLAVWAAGNGTQPLT 377
Query: 124 KSL--DLP--KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+ L +P K GR+ +D WLRV +VFAVGDC+ + LPA AQVA +QG
Sbjct: 378 RLLLSKIPEQKEARGRLLVDSWLRVKGALNVFAVGDCA----AMEPVPLPATAQVAGQQG 433
Query: 180 KYLFSLLNR-------------IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKAL 226
YL L NR A + E+ PF + LG +A IGR +A+
Sbjct: 434 AYLARLFNRDYCLSCPVPESEEKSTAPLAKWRPGGSPEVAKPFQFLSLGILAYIGRERAM 493
Query: 227 VDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ E + +AG L++L+W+S Y+T+ VS+RNR V +W T VFGRD+S+
Sbjct: 494 AQIETGLEK--IKMAGVLTYLLWQSVYITKQVSFRNRVLVLFDWFKTRVFGRDMSQF 548
>gi|71418977|ref|XP_811027.1| NADH dehydrogenase [Trypanosoma cruzi strain CL Brener]
gi|70875645|gb|EAN89176.1| NADH dehydrogenase, putative [Trypanosoma cruzi]
Length = 512
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/279 (44%), Positives = 169/279 (60%), Gaps = 21/279 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDD 68
EE RLLH VVVGGGPTGVEF+ ++DF DVR+ + ++ VT++EA E+ FD
Sbjct: 174 EEAKRLLHVVVVGGGPTGVEFAATVADFFRDDVRKINHKLVEFCKVTVLEAGEVFGMFDL 233
Query: 69 RLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 128
R+R++ +L GVR+V+G V V++++++ DG + GL+VWSTGVGPS+L K LD+
Sbjct: 234 RVRNWGKRRLDALGVRIVKGAVVAVNNKEVVTKDGIVIRTGLVVWSTGVGPSSLTKDLDV 293
Query: 129 PKSPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
++ GRI ID+ LRV + DVFA+GDC+ + K LP LA VA RQG YL
Sbjct: 294 DRTSRGRISIDDHLRVLRKGAPIPDVFAIGDCA----ANEKLPLPTLAAVASRQGVYLAK 349
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
K G +N + PF YR LGSM ++G ALV+L N +K G
Sbjct: 350 ------KVNGELSNKP----IMAPFEYRSLGSMVSLGDNAALVEL--NVPTK-FDFVGLK 396
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ WRSAYL+ + SWRN+ YV VNW + VFGRD + I
Sbjct: 397 ALFFWRSAYLSILGSWRNKLYVLVNWVGSAVFGRDTTFI 435
>gi|348674303|gb|EGZ14122.1| hypothetical protein PHYSODRAFT_547440 [Phytophthora sojae]
Length = 481
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 167/295 (56%), Gaps = 33/295 (11%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
G++ EEK RLLH VVVGGGPTG+EF EL D +++D+ +Y Y+ VTL+++ EIL+
Sbjct: 204 GVTPEEKQRLLHFVVVGGGPTGIEFCAELYDLVLQDLVHKYPQTSKYLGVTLVDSGEILN 263
Query: 65 SFDDRLRHYATTQLSK-SGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
FD LR A ++ K S + +V+ +V + + + G ++P GL+VW+ GVGP+ L
Sbjct: 264 GFDKHLRAVALRKIQKRSTMEIVKKNCIEVTEEGVTVEGGEKIPAGLVVWTAGVGPNELT 323
Query: 124 KSLDL-PKSPGGRIGIDEWLRV--------------PSVQDVFAVGDCSGYLESTGKTVL 168
KSL + KS G I +++ +V P +VF++GDC+ L+ L
Sbjct: 324 KSLTVFEKSKRGNILTNQYCQVLGAAEVEEKAPWGMPRRSNVFSIGDCAEILDYP----L 379
Query: 169 PALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVD 228
PA AQ A+ Q YL SLL G AK P+ ++ G MA +G Y+ L +
Sbjct: 380 PATAQKAQTQANYLTSLLR------GKNPTPAK------PYAFQSKGMMAYLGSYEGLFE 427
Query: 229 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ + ++L+G+ +W +WRSAYLT++ SWR R V ++W + GRD+S+
Sbjct: 428 AHPRDDDR-ITLSGWKAWFLWRSAYLTKLGSWRLRMQVPLDWLKAILVGRDVSKF 481
>gi|452821314|gb|EME28346.1| NADH dehydrogenase isoform 2 [Galdieria sulphuraria]
Length = 550
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 168/300 (56%), Gaps = 29/300 (9%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILS 64
IS+EEK RLL VVVGGGPTG EF+ EL DF+++D+++ Y + + V L+++ + IL+
Sbjct: 258 ISKEEKCRLLSFVVVGGGPTGCEFAAELHDFLVQDLKKYYPKLFGDVQVLLLQSGDSILT 317
Query: 65 SFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
FD L+ A +S ++++ + V +V S + L DG E+PYGL VW+ G G L
Sbjct: 318 QFDRTLQEKALENFRQSNIQVITKARVTEVTSTHIRLVDGKEIPYGLAVWAAGNGTQPLT 377
Query: 124 KSLDLPKSPG-------GRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
+ L L K P GR+ +D WLRV +VFAVGDC+ + LPA AQVA
Sbjct: 378 RLL-LSKIPEQKVDEARGRLLVDSWLRVKGALNVFAVGDCA----AMEPVPLPATAQVAG 432
Query: 177 RQGKYLFSLLNR-------------IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRY 223
+QG YL L NR A + E+ PF + LG +A IGR
Sbjct: 433 QQGAYLARLFNRDYCLSCPVPESEEKSTAPLAKWRPGGSPEVAKPFQFLSLGILAYIGRE 492
Query: 224 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+A+ + E + +AG L++L+W+S Y+T+ VS+RNR V +W T VFGRD+S+
Sbjct: 493 RAMAQIETGLEK--IKMAGVLTYLLWQSVYITKQVSFRNRVLVLFDWFKTRVFGRDMSQF 550
>gi|342184562|emb|CCC94044.1| putative NADH dehydrogenase [Trypanosoma congolense IL3000]
Length = 494
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/281 (42%), Positives = 169/281 (60%), Gaps = 21/281 (7%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSF 66
S +EK RLLH VVVGGGPTGVEFS +L++F+ DV+ + Y VT++EA E+ S F
Sbjct: 172 SVQEKKRLLHTVVVGGGPTGVEFSADLAEFLRHDVKGINPELLQYCRVTVLEAGEVFSMF 231
Query: 67 DDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
D R+R + +L G+R+V+G V V ++++ DG P GL+VWSTGVGPSTL K +
Sbjct: 232 DLRVREWGKRRLDALGIRIVKGSVVAVKEKEVVTKDGGVFPAGLVVWSTGVGPSTLTKEI 291
Query: 127 DLPKSPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
+ ++P GRI ID +RV +QDV+A+GDC+ + LP LA VA RQG YL
Sbjct: 292 KVDRTPQGRISIDNHMRVLRNGSPIQDVYAIGDCA----ADSNNPLPCLAAVASRQGTYL 347
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
+ N I AN+ PF Y+ LGSM ++G A+V L ++ + G
Sbjct: 348 AAKFNAI------LANAPHTT----PFQYKSLGSMVSLGTSSAVVQLNGRRK---VDFVG 394
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ WRSAYL+ + SWRN+ Y+ VNW + +FGRD++ I
Sbjct: 395 LKALFFWRSAYLSMLGSWRNKLYIIVNWLGSALFGRDVTLI 435
>gi|325192333|emb|CCA26778.1| NADHubiquinone oxidoreductase putative [Albugo laibachii Nc14]
Length = 484
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/298 (41%), Positives = 182/298 (61%), Gaps = 30/298 (10%)
Query: 4 AGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL 63
AGISEEEK RLLH VVVGGGPTGVEF GEL DF+++D+ + Y Y+ ++L+++ EIL
Sbjct: 199 AGISEEEKRRLLHFVVVGGGPTGVEFCGELHDFLVQDLARLYPLASKYVFISLVDSGEIL 258
Query: 64 SSFDDRLRHYATTQL-SKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
+ FD LR +A +L S++ +RLV+ ++V +IL GT VP GL+VW+ GVGP+ L
Sbjct: 259 TGFDQHLREFALRKLASRATLRLVKDNCEEVLEDGVILQSGTRVPCGLVVWTAGVGPNEL 318
Query: 123 VKSLDL-PKSPGGRIGIDEWLR---VPSVQ-----------DVFAVGDCSGYLESTGKTV 167
KSLD+ KS G I +E+ + VP V+ ++F++GDC+ E +G +
Sbjct: 319 TKSLDICEKSTRGTILTNEYCQVLGVPQVEKESIFGLDMKSNIFSIGDCA---EISG-SP 374
Query: 168 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALV 227
LPA AQ A+ Q YL LL + G KD + DP+ ++ G MA +G Y+ L
Sbjct: 375 LPATAQKAQTQAIYLSQLLRQSLPRG-------KDAHI-DPYHFQSRGMMAYLGSYEGLF 426
Query: 228 DLRQNKESKGL--SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+L+ G+ +G+ +WL+WRSAYLT++ SWR R V ++W + GRD+SR
Sbjct: 427 ELKSRNRPDGVLARASGWKAWLIWRSAYLTQLGSWRLRMQVPLDWLKAMIVGRDVSRF 484
>gi|301099929|ref|XP_002899055.1| NADH-ubiquinone oxidoreductase, putative [Phytophthora infestans
T30-4]
gi|262104367|gb|EEY62419.1| NADH-ubiquinone oxidoreductase, putative [Phytophthora infestans
T30-4]
Length = 480
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 168/295 (56%), Gaps = 33/295 (11%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
G++ EEK RLLH VVVGGGPTG+EF EL D +++D+ +Y ++ VTL+++ EIL+
Sbjct: 203 GMTPEEKQRLLHFVVVGGGPTGIEFCAELYDLVLQDLVHKYPQTSKHLGVTLVDSGEILN 262
Query: 65 SFDDRLRHYATTQLSK-SGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
FD LR A ++ K + +++V+ +V ++ + + G ++P GL+VW+ GVGP+ L
Sbjct: 263 GFDTHLRAVALRKIQKRNTMKIVKKNCIEVTAEGVTVEGGEKIPAGLVVWTAGVGPNELT 322
Query: 124 KSLDL-PKSPGGRIGIDEWLRV--------------PSVQDVFAVGDCSGYLESTGKTVL 168
KSL + KS G I +++ +V P +VF++GDC+ L+ L
Sbjct: 323 KSLTVFEKSKRGNILTNQYCQVLGAAEVEEKAPWGMPRRSNVFSIGDCAEILDYP----L 378
Query: 169 PALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVD 228
PA AQ A+ Q YL SL K++ P+ ++ G MA +G Y+ L +
Sbjct: 379 PATAQKAQSQANYLTSLFR------------GKNLAPAKPYAFQSKGMMAYLGSYEGLFE 426
Query: 229 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
++ ++L+G+ +W +WRSAYLT++ SWR R V ++W + GRD+S+
Sbjct: 427 A-HPRDDDTITLSGWKAWFLWRSAYLTKLGSWRLRLQVPLDWLKAILVGRDVSKF 480
>gi|71748224|ref|XP_823167.1| NADH dehydrogenase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832835|gb|EAN78339.1| NADH dehydrogenase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 491
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 122/285 (42%), Positives = 165/285 (57%), Gaps = 21/285 (7%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
L S EEK RLLH VVVGGGPTGVEFS +L++F+ DV+ + + VT++EA E+
Sbjct: 168 LPVTSVEEKKRLLHTVVVGGGPTGVEFSADLAEFLRDDVKNINPELVQFCKVTVLEAGEV 227
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
S+FD R+R + +L GVR+V+G V V +++I G GL+VWSTGVGPS L
Sbjct: 228 FSTFDLRVREWGKRRLDALGVRIVKGNVVAVQEKEVITKSGEVFSTGLVVWSTGVGPSPL 287
Query: 123 VKSLDLPKSPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 178
K L + ++ GRI +DE LRV + DV+A+GDC+ + LP LA VA RQ
Sbjct: 288 TKELKVDRTRQGRISVDEHLRVLRDGVPIPDVYAIGDCA----TNESNPLPTLAAVASRQ 343
Query: 179 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 238
G Y L +I G+ PF Y LGSM ++G A+V+L ++ L
Sbjct: 344 GVY---LAKKINAELAGKP-------FATPFKYESLGSMVSLGTSSAVVELNGPRK---L 390
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G + WRSAYL+ V SWRNR YV VNW + +FGRD++ I
Sbjct: 391 DFVGLKALFFWRSAYLSIVGSWRNRLYVIVNWLGSAIFGRDLTLI 435
>gi|22415742|gb|AAM95239.1| putative NADH dehydrogenase [Trypanosoma brucei]
Length = 491
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/285 (42%), Positives = 167/285 (58%), Gaps = 21/285 (7%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
L S EEK RLLH VVVGGGPTGVEFS +L++F+ DV+ + + VT++EA E+
Sbjct: 168 LPVTSVEEKKRLLHTVVVGGGPTGVEFSADLAEFLRDDVKNINPELVQFCKVTVLEAGEV 227
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
S+FD R+R + +L GVR+V+G V V +++I G GL+VWSTGVGPS L
Sbjct: 228 FSTFDLRVREWGKRRLDALGVRIVKGNVVAVQEKEVITKSGEVFSTGLVVWSTGVGPSPL 287
Query: 123 VKSLDLPKSPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 178
K L + ++ GRI +DE L+V + DV+A+GDC+ + LP LA VA RQ
Sbjct: 288 TKELKVDRTRQGRISVDEHLQVLRDGVPIPDVYAIGDCA----TNESNPLPTLAAVASRQ 343
Query: 179 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 238
G Y L +I G+ +A PF Y LGSM ++G A+V+L ++ L
Sbjct: 344 GVY---LAKKINAELAGKPFAA-------PFKYESLGSMVSLGTSSAVVELNGPRK---L 390
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G + WRSAYL+ V SWRNR YV VNW + +FGRD++ I
Sbjct: 391 DFVGLKALFFWRSAYLSIVGSWRNRLYVIVNWLGSAIFGRDLTLI 435
>gi|261333064|emb|CBH16059.1| NADH dehydrogenase, putative [Trypanosoma brucei gambiense DAL972]
Length = 491
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/285 (42%), Positives = 167/285 (58%), Gaps = 21/285 (7%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
L S EEK RLLH VVVGGGPTGVEFS +L++F+ DV+ + + VT++EA E+
Sbjct: 168 LPVTSVEEKKRLLHTVVVGGGPTGVEFSADLAEFLRDDVKNINPELVQFCKVTVLEAGEV 227
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
S+FD R+R + +L GVR+V+G V V +++I G GL+VWSTGVGPS L
Sbjct: 228 FSTFDLRVREWGKRRLDALGVRIVKGNVVAVQEKEVITKSGEVFSTGLVVWSTGVGPSPL 287
Query: 123 VKSLDLPKSPGGRIGIDEWLRV----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 178
K L + ++ GRI +DE L+V + DV+A+GDC+ + LP LA VA RQ
Sbjct: 288 TKELKVDRTRQGRISVDEHLQVLRDGVPIPDVYAIGDCA----TNESNPLPTLAAVASRQ 343
Query: 179 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 238
G Y L +I G+ +A PF Y LGSM ++G A+V+L ++ L
Sbjct: 344 GVY---LAKKINAELAGKPFAA-------PFKYESLGSMVSLGTSSAVVELNGPRK---L 390
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G + WRSAYL+ V SWRNR YV VNW + +FGRD++ I
Sbjct: 391 DFVGLKALFFWRSAYLSIVGSWRNRLYVIVNWLGSAIFGRDLTLI 435
>gi|167517391|ref|XP_001743036.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778135|gb|EDQ91750.1| predicted protein [Monosiga brevicollis MX1]
Length = 405
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/280 (38%), Positives = 153/280 (54%), Gaps = 32/280 (11%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILS 64
+S E + RL VVGGGPTGVEF+ ELSDF+ +D + Y + V + EA IL
Sbjct: 156 LSPEVRRRLTTFCVVGGGPTGVEFAAELSDFLEQDAARLYPELTMLPQVIIFEAGTSILG 215
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
SFD L Y ++ + V + ++ VK+V Q L+L+ G EV +VWSTGV P +LV
Sbjct: 216 SFDQALSEYGLMRMKRQHVDIRLQTQVKEVKDQSLVLSTGEEVNTSTIVWSTGVAPRSLV 275
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
+ LD G IG+DE L++ Q+ +A+GDC+ + LP +AQVAE+QG YL
Sbjct: 276 QQLDAKHKSNGSIGVDECLQIQEAQNAYALGDCASL-----ERRLPTVAQVAEQQGAYLA 330
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
N+ +SAK PF + G +A +G Y G+ L+GF
Sbjct: 331 RHFNQ-------NFSSAK------PFAFASKGMLAYLGSY------------GGVKLSGF 365
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+WLVWR YLT++ +WR+R V +WA T FGRD +R
Sbjct: 366 KAWLVWRGGYLTKLGTWRSRLQVPFDWAKTMFFGRDPARF 405
>gi|19112053|ref|NP_595261.1| mitochondrial NADH dehydrogenase (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74675998|sp|O43090.1|NDH2_SCHPO RecName: Full=Probable NADH-ubiquinone oxidoreductase C947.15c,
mitochondrial; Flags: Precursor
gi|2894302|emb|CAA17043.1| mitochondrial NADH dehydrogenase (predicted) [Schizosaccharomyces
pombe]
Length = 551
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 168/312 (53%), Gaps = 42/312 (13%)
Query: 2 FLAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 61
F +S EE++RLLH VVGGGPTG+EF+ E+ DFI DV+ + ++ IHVTLIEA
Sbjct: 242 FNKDLSPEERARLLHITVVGGGPTGMEFAAEMQDFIDNDVKDMFPELQKDIHVTLIEAAP 301
Query: 62 -ILSSFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILN----DGT----EVPYGLL 111
+L F L Y ++++ + +VKDV+ + LI+ DG+ E+PYG+L
Sbjct: 302 GVLPMFTKSLITYTENLFKNLNIKIMTKTVVKDVNEKNLIVQKTNPDGSKAMQEIPYGML 361
Query: 112 VWSTGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTV 167
VW+ G+ L ++L +P+ G R G +DE+ RV V +++AVGDC+ +
Sbjct: 362 VWAAGITARPLTRTLMSSIPEQSGARKGLIVDEFFRVKGVPEMYAVGDCAF-------SG 414
Query: 168 LPALAQVAERQGKYLFSLLNRIGKAGGGRAN-SAKDMELG-------------------- 206
LPA AQVA +QG +L LN GK A + +LG
Sbjct: 415 LPATAQVANQQGAWLAKNLNVEGKKFALHERIQALEKQLGEKEAPSQVAGLKQQVEQLKL 474
Query: 207 DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYV 266
+PF Y H G++A +G KA+ DL+ K L L G + WR AYL ++S R++F V
Sbjct: 475 EPFKYHHQGALAYVGDEKAIADLKLPFMKKMLPLQGIVGHTFWRLAYLNELISARSQFMV 534
Query: 267 AVNWATTFVFGR 278
++W T +FGR
Sbjct: 535 LIDWLKTRLFGR 546
>gi|426193998|gb|EKV43930.1| NDE1 mitochondrial external NADH dehydrogenase [Agaricus bisporus
var. bisporus H97]
Length = 488
Score = 183 bits (464), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 113/294 (38%), Positives = 171/294 (58%), Gaps = 31/294 (10%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
IS+ E+ LL+ VVGGGPTGVEF+ EL D + DVR Y + + ++TL + A+ ILS
Sbjct: 210 ISDVERRNLLNFCVVGGGPTGVEFAAELHDLLQTDVRTHYPDLARFTNITLYDVADSILS 269
Query: 65 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
SFD L Y S+ GV L V+ V++ KL + + EVP+GLLVWSTG+ P+ LV
Sbjct: 270 SFDQSLVKYTEKMFSREGVHILTNHHVERVEAGKLFIREKGEVPFGLLVWSTGLAPNPLV 329
Query: 124 KSLD-LPKSPGGRIGI-DEWLRV-------PSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
++ + K+P + I ++ L V P+ DV+A+GD + + E+ LPA AQV
Sbjct: 330 SAMSGVKKNPKTQSVITNDQLNVIMQETNEPN-PDVWAIGDAATFEEAP----LPATAQV 384
Query: 175 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVD----LR 230
A ++ Y+ + LN + AKD + +PF + + GS+A IG + A+ D L
Sbjct: 385 ASQKAHYMITKLNTL----------AKDKDHCEPFEFHNQGSLAYIGNWNAIYDRSSTLP 434
Query: 231 QNKESKGLSL-AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ ++ K +S G ++WL+WRSAY T +SWRN+ V W ++FGRD++R
Sbjct: 435 EGEKDKFMSKETGRVAWLLWRSAYFTMTLSWRNKILVPTYWFLNWMFGRDMTRF 488
>gi|409077999|gb|EKM78363.1| NDE2, mitochondrial external NADH dehydrogenase [Agaricus bisporus
var. burnettii JB137-S8]
Length = 488
Score = 183 bits (464), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 113/294 (38%), Positives = 171/294 (58%), Gaps = 31/294 (10%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
IS+ E+ LL+ VVGGGPTGVEF+ EL D + DVR Y + + ++TL + A+ ILS
Sbjct: 210 ISDVERRNLLNFCVVGGGPTGVEFAAELHDLLQTDVRTHYPDLARFTNITLYDVADSILS 269
Query: 65 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
SFD L Y S+ GV L V+ V++ KL + + EVP+GLLVWSTG+ P+ LV
Sbjct: 270 SFDQSLVKYTEKMFSREGVHILTNHHVERVEAGKLFIREKGEVPFGLLVWSTGLAPNPLV 329
Query: 124 KSLD-LPKSPGGRIGI-DEWLRV-------PSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
++ + K+P + I ++ L V P+ DV+A+GD + + E+ LPA AQV
Sbjct: 330 SAMSGVKKNPKTQSVITNDQLNVIMQETNEPN-PDVWAIGDAATFEEAP----LPATAQV 384
Query: 175 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVD----LR 230
A ++ Y+ + LN + AKD + +PF + + GS+A IG + A+ D L
Sbjct: 385 ASQKAHYMITKLNTL----------AKDKDHCEPFEFHNQGSLAYIGNWNAIYDRSSTLP 434
Query: 231 QNKESKGLSL-AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ ++ K +S G ++WL+WRSAY T +SWRN+ V W ++FGRD++R
Sbjct: 435 EGEKDKFMSKETGRVAWLLWRSAYFTMTLSWRNKILVPTYWFLNWMFGRDMTRF 488
>gi|449546095|gb|EMD37065.1| hypothetical protein CERSUDRAFT_114957 [Ceriporiopsis subvermispora
B]
Length = 471
Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 106/289 (36%), Positives = 167/289 (57%), Gaps = 23/289 (7%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
I+++E+ +LLH +VGGGPTGVEF+ EL D + D+RQ + ++ ++L + A IL
Sbjct: 195 ITDDERRKLLHFCIVGGGPTGVEFAAELHDLLHTDMRQHFPNMARMARISLYDVAPFILG 254
Query: 65 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
SFD L+ YA + + G+ L + V+ V+ K+ + + EVP+GLLVWSTG+ P+ LV
Sbjct: 255 SFDTGLQDYAVKKFKREGISILTQHHVERVEPGKMYVKEQGEVPFGLLVWSTGLAPNPLV 314
Query: 124 KSLDLPK--SPGGRIGIDEWLRV-------PSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
+S++ + + DE L V P+ +++A+GD + T LPA AQV
Sbjct: 315 QSINEAEKHEKTSSLFTDEHLNVLMKDTGKPN-PEIWAIGDAA----IIKGTPLPATAQV 369
Query: 175 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 234
A ++GKYL LN + + S + +PF + + GS+A +G ++AL D R E
Sbjct: 370 ANQKGKYLTKKLNTLIR------ESPLSLREAEPFKFHNAGSLAYLGDWEALYD-RTKAE 422
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
AG L+WL+WRSAY T+ +SW+N+ V W ++FGRD+S+
Sbjct: 423 HVKTKDAGRLAWLLWRSAYFTKTLSWKNKILVPTYWFLNWIFGRDLSKF 471
>gi|166240085|ref|XP_646542.2| hypothetical protein DDB_G0270104 [Dictyostelium discoideum AX4]
gi|182667920|sp|Q55CD9.2|NDH_DICDI RecName: Full=Probable NADH dehydrogenase
gi|165988735|gb|EAL72402.2| hypothetical protein DDB_G0270104 [Dictyostelium discoideum AX4]
Length = 451
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/282 (37%), Positives = 159/282 (56%), Gaps = 22/282 (7%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN- 60
L +S EE+ RLL V+VGGG TG+EF+ EL+DF D+ + + V + + + L+EA+
Sbjct: 187 LPDVSTEERERLLSFVIVGGGATGIEFTSELNDFFSEDLSRLFPFVPVNEVKIILLEASG 246
Query: 61 EILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+ILS+FD +L A SG+ + VK+V +IL++G +PYGLLVWSTG+G
Sbjct: 247 KILSTFDQKLVKKALINFRNSGIDVRTHSSVKEVLKDYVILDNGDRIPYGLLVWSTGIGQ 306
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
LVK+ K RI +D+ LRV + +VF+ GDC+ +E+ P AQVA +
Sbjct: 307 HPLVKNSSFEKDSHDRIIVDDHLRVKNYSNVFSFGDCAN-VENKN---YPPTAQVASQSA 362
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
YL N + K N K PF ++ LG +A G+ ++ ++
Sbjct: 363 VYLAKEFNNLEKLN---PNPPK------PFAFKFLGLLAYTGKKSGIL------QTDFFD 407
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
L+GF+ ++ WRSAYLTR+ S R++ V +W T +FGRDIS
Sbjct: 408 LSGFIGFITWRSAYLTRLGSLRSKIQVPFDWMRTLIFGRDIS 449
>gi|406701344|gb|EKD04492.1| NADH dehydrogenase [Trichosporon asahii var. asahii CBS 8904]
Length = 569
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 113/310 (36%), Positives = 161/310 (51%), Gaps = 39/310 (12%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
G SE E RL+H +VVGGGPTGVE++GEL DF++ D+++ Y V D + +TLIEA
Sbjct: 268 FPGQSEAEVDRLMHMIVVGGGPTGVEYAGELHDFLIEDLKKWYPEVADKLRITLIEALPN 327
Query: 62 ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT----EVPYGLLVWSTG 116
+L +F +L Y + ++ + L R +VKDV +I+ D E+PYGLLVW+TG
Sbjct: 328 VLPAFSKQLIQYTESTFKENKIDVLTRTMVKDVKEDSVIVQDANKETREIPYGLLVWATG 387
Query: 117 VGPSTLVKSL--DLPKSPGGRIGI--DEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+ ++L LP R GI D++L + V+A+GDC+ T A
Sbjct: 388 NTSRPITRNLMAKLPAVQTQRRGIVVDDYLEMLGAPGVYAIGDCTA-------TSYAPTA 440
Query: 173 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG--------------------DPFVYR 212
QVA ++GKYL + +IG+ K E G PF Y
Sbjct: 441 QVASQEGKYLATTFGKIGQKAKYERQLKKLRESGTASAEEIENVVKKLNRVSKITPFHYS 500
Query: 213 HLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWAT 272
H GS+A IG KA+ DL + L+ G + L WRSAY++ + S RNR V +W
Sbjct: 501 HQGSLAYIGSEKAIADLPLF--NGNLASGGGAAMLFWRSAYISTLYSLRNRSLVMADWLK 558
Query: 273 TFVFGRDISR 282
+FGRD+SR
Sbjct: 559 VKLFGRDVSR 568
>gi|281204141|gb|EFA78337.1| pyridine nucleotide-disulphide oxidoreductase [Polysphondylium
pallidum PN500]
Length = 558
Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 166/298 (55%), Gaps = 28/298 (9%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY-SHVKDYIHVTLIEA-NEI 62
G + E RLLH V+VGGGPTGVEF EL+DFI DV++ + H+ D VTL+EA I
Sbjct: 268 GQPDAEIDRLLHFVIVGGGPTGVEFCAELNDFITNDVKKAFPKHLTDRCRVTLVEALPHI 327
Query: 63 LSSFDDRLRHYATTQLSKSGVRLV--RGIVKDVDSQKLILNDGTE----VPYGLLVWSTG 116
L+ FD + + +L S + + V V +++I+ D + VPYG+LVW+TG
Sbjct: 328 LTVFDKNIIDHVEKKLQSSPTTKIWTQTAVTGVKEREMIVRDAEKKERSVPYGMLVWATG 387
Query: 117 VGPSTLVKSLDL---PKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 171
P + + L P+ R G +DE+ RV ++A+GDCS T L
Sbjct: 388 NAPRPVTQKLIQSIGPEVQNVRRGLVVDEYFRVKGADGIWAIGDCS-------VTPLAPT 440
Query: 172 AQVAERQGKYLFSLLNRIG----KAGGGRANSAK---DMELGDPFVYRHLGSMATIGRYK 224
AQVA +QG+YL L N I + G+ N + D++ F YRH+G++A +G
Sbjct: 441 AQVASQQGRYLGRLFNDISEDLHQKKQGQMNDQEFTADLKKKPLFKYRHMGTLAYVGDKS 500
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
A+ ++ + ++K + G ++L+WRSAYL++ +S RNR VA +W +FGRD+SR
Sbjct: 501 AVFQIK-DADNKTTTSEGLATFLLWRSAYLSKCLSIRNRVLVAFDWTKASIFGRDVSR 557
>gi|170091510|ref|XP_001876977.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648470|gb|EDR12713.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 467
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 161/289 (55%), Gaps = 26/289 (8%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS 64
+S+ ++ LL+ VVGGGPTGVEFS EL D + D+ + Y + +TL + IL
Sbjct: 194 MSDIQRRNLLNFCVVGGGPTGVEFSAELFDLLHSDIAKHYPVLARLAKITLYDVGPSILG 253
Query: 65 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
FD L Y S+ G+ L R V+ V+++KLI+ + EVP+GLLVWSTG+ P+ L+
Sbjct: 254 MFDKSLIQYTEKTFSREGISILTRHHVERVEARKLIVKEQGEVPFGLLVWSTGLAPNPLI 313
Query: 124 KSLDLPKSPGGRIGIDEWLRV------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
S++ + G + ++ L V P+ DV+A+GD + ++ LPA AQVA +
Sbjct: 314 SSINEIQKDGKSLITNDHLNVIMKDGSPN-PDVWAIGDAAKIEDAP----LPATAQVANQ 368
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
+GKYL L I A+D E PF + + GS+A IG +KA+ D S+G
Sbjct: 369 KGKYLVKKLRYI----------ARDQEYPKPFEFHNQGSLAYIGDWKAIYDRPGPPGSEG 418
Query: 238 LSL---AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G +WL+WRSAY T +SWRN+ V W ++FGRD++R
Sbjct: 419 GFMQKETGRAAWLLWRSAYFTMTLSWRNKILVPTYWFLNWIFGRDLTRF 467
>gi|406698475|gb|EKD01711.1| NDE1 external NADH dehydrogenase [Trichosporon asahii var. asahii
CBS 8904]
Length = 487
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 165/290 (56%), Gaps = 25/290 (8%)
Query: 2 FLAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-AN 60
+ +SE+E+ +L +VGGGPTGVEF+ EL DF+ DVR+R+ + D I + L + A
Sbjct: 209 YEPSLSEQERRDILKFCIVGGGPTGVEFAAELHDFVHEDVRKRFPDIADKIEIRLFDVAP 268
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
IL SFD LR YA + ++ G++++ + VD L L+ G P+GLLVWSTGV
Sbjct: 269 GILMSFDVALREYAEKKYARDGIKIMPNSKISKVDRHALYLDSGERYPFGLLVWSTGVQA 328
Query: 120 STLVKSLD-LPKSPGGR-IGIDEWLRV------PSVQDVFAVGD-CSGYLESTGKTVLPA 170
+ V SL L K I ++E L+V V +V+A+GD C+ +TG+ LPA
Sbjct: 329 NEFVNSLQTLQKDDKTHSITVNEHLQVIDKNSGTVVPNVWAIGDNCT---PTTGR--LPA 383
Query: 171 LAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLR 230
AQVA + Y+ LN++ + D+ F +++ GSM IG KA+VD
Sbjct: 384 TAQVAAQMATYMSKSLNKLAQ-----GTPVTDLAA---FKWKNRGSMVFIGDEKAMVDRS 435
Query: 231 QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
+ +G +AGF++W++WRS Y++ +S RN+ V V WA + FGRDI
Sbjct: 436 GSSTFRG-RVAGFMAWIMWRSYYMSLALSPRNKILVPVYWALAWCFGRDI 484
>gi|401886544|gb|EJT50572.1| NDE1, external NADH dehydrogenase [Trichosporon asahii var. asahii
CBS 2479]
Length = 487
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 164/290 (56%), Gaps = 25/290 (8%)
Query: 2 FLAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-AN 60
+ +SE+E+ +L +VGGGPTGVEF+ EL DF+ DVR+R+ + D I + L + A
Sbjct: 209 YEPSLSEQERRDILKFCIVGGGPTGVEFAAELHDFVHEDVRKRFPDIADKIEIRLFDVAP 268
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
IL SFD LR YA + ++ G++++ + VD L L+ G P+GLLVWSTGV
Sbjct: 269 GILMSFDVALREYAEKKYARDGIKIMPNSKISKVDRHALYLDSGERYPFGLLVWSTGVQA 328
Query: 120 STLVKSLD-LPKSPGGR-IGIDEWLRV------PSVQDVFAVGD-CSGYLESTGKTVLPA 170
+ V SL L K I ++E L+V V +V+A GD C+ +TG+ LPA
Sbjct: 329 NEFVNSLQTLQKDDKTHSITVNEHLQVIDKNSGTVVPNVWATGDNCT---PTTGR--LPA 383
Query: 171 LAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLR 230
AQVA + Y+ LN++ + D+ F +++ GSM IG KA+VD
Sbjct: 384 TAQVAAQMATYMSKSLNKLAQ-----GTPVTDLAA---FKWKNRGSMVFIGDEKAMVDRS 435
Query: 231 QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
+ +G +AGF++W++WRS Y++ +S RN+ V V WA + FGRDI
Sbjct: 436 GSSTFRG-RVAGFMAWIMWRSYYMSLALSPRNKILVPVYWALAWCFGRDI 484
>gi|336372905|gb|EGO01244.1| NDE1, mitochondrial external NADH dehydrogenase [Serpula lacrymans
var. lacrymans S7.3]
Length = 478
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 159/287 (55%), Gaps = 23/287 (8%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
IS+ E+ RLL+ +VGGGPTGVEF+ EL D + ++ + Y + +TL + A IL
Sbjct: 206 ISDVERRRLLNFCIVGGGPTGVEFAAELHDLLHAEIEKHYPSLARMAKITLYDVAPNILG 265
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+FD L YA + + G+ + R V+ V+ K+ + + EVP+GLLVWSTG+ P+ L+
Sbjct: 266 NFDKSLGVYAVDKFQRDGISIKTRHHVERVEKDKMFVKEQGEVPFGLLVWSTGLAPNPLI 325
Query: 124 KSL-DLPKSPGGR-IGIDEWLRV-----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
+S+ ++ K + + DE L V +V+A+GD S + LPA AQVA
Sbjct: 326 QSIKEVSKDEKTQSLLTDEQLNVIKQDGTPDPNVWAIGDASVIPNAR----LPATAQVAN 381
Query: 177 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
++ KYL LN+I KD E PF + LGSMA +G +KA+ D
Sbjct: 382 QKAKYLVKKLNKI----------VKDQEHTKPFEFLDLGSMAYLGDWKAIYDRSGADTGI 431
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+G L+WL+WRSAY T +S RN+ V + W ++FGRD++R
Sbjct: 432 KTKESGRLAWLLWRSAYFTMTLSLRNKILVPMYWFMNWIFGRDLTRF 478
>gi|302683398|ref|XP_003031380.1| hypothetical protein SCHCODRAFT_56625 [Schizophyllum commune H4-8]
gi|300105072|gb|EFI96477.1| hypothetical protein SCHCODRAFT_56625 [Schizophyllum commune H4-8]
Length = 474
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 161/294 (54%), Gaps = 30/294 (10%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
+S+ E+ LL+ +VGGGPTGVEF+ EL D I +++ Y + +TL + A IL
Sbjct: 195 LSDIERRNLLNFCIVGGGPTGVEFAAELHDLIHAEIQSHYPVLARMARITLYDVAPSILG 254
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
FD L +Y L + GVR+ G V+ V+ ++I+ + EVP+GLLVWSTG+ P+ LV
Sbjct: 255 MFDRELVNYTENTLRREGVRIRTGHHVERVERDRMIVTEQGEVPFGLLVWSTGLAPNPLV 314
Query: 124 KS---LDLPKSPGGRIGID---EWLRVPSVQD--VFAVGDCSGYLESTGKTVLPALAQVA 175
S L K G I +D +R D ++ +GD + ++ +LPA AQVA
Sbjct: 315 SSITELQKDKKSGRTIQVDGHLNAIRADGTPDPNIWVIGDAAQVPDA----ILPATAQVA 370
Query: 176 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 235
+Q K+L LNRI AKD + F + ++GS+A IG +KA+ D +K
Sbjct: 371 NQQAKFLTRQLNRI----------AKDKSVDRVFEFHNMGSLAYIGNWKAIYDRGSSKNG 420
Query: 236 KGLSLAGF------LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G A F ++WL+WRSAY TR +S RN+ V W ++FGRD++R
Sbjct: 421 NGDKPAPFTKETGRVAWLLWRSAYFTRTLSVRNKILVPFYWFLNWIFGRDLTRF 474
>gi|326497827|dbj|BAJ94776.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 184
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/116 (70%), Positives = 96/116 (82%)
Query: 143 RVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKD 202
++ V DVFAVGDC G+LEST K VLPALAQVAERQG YL LLN + KAGGG ANS
Sbjct: 33 QLEEVPDVFAVGDCCGFLESTRKKVLPALAQVAERQGLYLARLLNSVMKAGGGHANSHVK 92
Query: 203 MELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVV 258
++LG FVY+HLGSMAT+GRYKALVDLRQ+K SKG+S+AGF +W +WRSAY+TRVV
Sbjct: 93 VDLGPKFVYKHLGSMATVGRYKALVDLRQSKGSKGISIAGFANWFIWRSAYVTRVV 148
>gi|409047219|gb|EKM56698.1| hypothetical protein PHACADRAFT_91741 [Phanerochaete carnosa
HHB-10118-sp]
Length = 465
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 157/288 (54%), Gaps = 27/288 (9%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
+S+ E+ LH +VGGGPTGVEF+ EL D + D+++ Y + +TL + A IL
Sbjct: 195 LSDIERRNQLHFCIVGGGPTGVEFAAELHDLLNTDIKKHYPTLHRLARITLFDVAPNILG 254
Query: 65 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
SFD+ L+ +A + + G+R L + V+ V+ KL + + EVP+GLLVWSTG+ P+ L+
Sbjct: 255 SFDEGLQDFAVQRFKREGIRILTQHHVEKVEEGKLFVKEKGEVPFGLLVWSTGLAPNPLI 314
Query: 124 KSLDLPK--SPGGRIGIDEWLRV---PSVQ---DVFAVGDCSGYLESTGKTVLPALAQVA 175
KS+ K + DE +V P Q +FA+GDC+ T LPA AQ
Sbjct: 315 KSISEAKKHEKTHSLITDEHCQVLMGPDAQPDPSIFAIGDCA----MIDGTPLPATAQGT 370
Query: 176 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 235
KYL LN++ + +E PFV+ +GS+A +G + A+ D R +
Sbjct: 371 P--PKYLTKKLNKL----------VRGVEHTKPFVFNDMGSLAYLGDWHAVYD-RTKADR 417
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
AG +WL+WRSAY TR +S RN+ V W ++FGRD+SR
Sbjct: 418 VKTKEAGRFAWLLWRSAYFTRTLSIRNKILVPFYWFMNWLFGRDLSRF 465
>gi|392574024|gb|EIW67161.1| hypothetical protein TREMEDRAFT_45240 [Tremella mesenterica DSM
1558]
Length = 472
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 107/287 (37%), Positives = 157/287 (54%), Gaps = 20/287 (6%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
S E + LL +VGGGPTGVE++ EL DF+ RDV + Y H+KD + +TL + A IL
Sbjct: 197 CSPELRRALLSFKIVGGGPTGVEWAAELHDFVHRDVYRLYPHLKDQVRITLYDVAPGILI 256
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTE-VPYGLLVWSTGVGPSTLV 123
+FD LR YA + + GV + + + DG E PYGLLVWSTG+ P+ +
Sbjct: 257 NFDASLRAYAEKKFHRDGVTIRPNSSITAMGEDWVELDGKERHPYGLLVWSTGLCPNPFI 316
Query: 124 KSLDLPKSPGGR-IGIDEWLRVPS-----VQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
SL + K R I +D+W RV + ++ VFA+GD + + LPA AQVA +
Sbjct: 317 ASLPVKKHERSRAILVDKWQRVVNTEGQRLKGVFAIGDNATPADGPP---LPATAQVATQ 373
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL-RQNKESK 236
Q K+L LN G+ + +E F +++ GSM +G +ALVD R++
Sbjct: 374 QAKWLAKALNAHGR--------GQTLESQPGFEWKNWGSMVYVGNSRALVDRSREDVAGP 425
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+AG+ +W++WRS Y + WRN+ V ++W FGRDI+R
Sbjct: 426 KSRMAGWAAWILWRSYYAQLAMGWRNKVLVPIHWTLASFFGRDITRF 472
>gi|402219597|gb|EJT99670.1| NADH dehydrogenase [Dacryopinax sp. DJM-731 SS1]
Length = 544
Score = 169 bits (429), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 163/309 (52%), Gaps = 41/309 (13%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEIL 63
G + E RL+H +VVGGGPTGVEF+GEL DF++ D+ Y + +++H++LIEA +L
Sbjct: 245 GQAPSEIDRLMHIIVVGGGPTGVEFAGELHDFLVDDLHSWYPELANHLHISLIEALPNVL 304
Query: 64 SSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT-----EVPYGLLVWSTGV 117
F +L Y + + + L R +VK+V +K +L G E+PYGLLVW+ G
Sbjct: 305 PVFSKQLIQYTESTFKANKIDILTRTMVKEV-REKTVLVQGENKELREIPYGLLVWAAGN 363
Query: 118 GPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
+ + L LP R G +D+ LR+ VFA+GDC+ T+ AQ
Sbjct: 364 TSRQITRDLMAQLPNVQNQRRGLLVDDHLRLLGADGVFALGDCTA-------TLYAPTAQ 416
Query: 174 VAERQGKYLFSLLNRIGKAGGGRAN--------SAKDMELG------------DPFVYRH 213
VA +QGKY+ +L ++ K A AK E+ PF Y H
Sbjct: 417 VASQQGKYIGRVLEQMAKKEQLEATLRSLRVSPDAKPEEIEAVVKQINKVANIKPFHYSH 476
Query: 214 LGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATT 273
GS+A IG KA+ DL + L+ G ++L WRSAY++ ++S RNRF V +W
Sbjct: 477 QGSLAYIGSEKAVADLPLF--NGNLATGGVATFLFWRSAYISNLLSLRNRFLVLNDWMKV 534
Query: 274 FVFGRDISR 282
+FGRD+SR
Sbjct: 535 KLFGRDVSR 543
>gi|71009789|ref|XP_758311.1| hypothetical protein UM02164.1 [Ustilago maydis 521]
gi|46098053|gb|EAK83286.1| hypothetical protein UM02164.1 [Ustilago maydis 521]
Length = 593
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 166/313 (53%), Gaps = 44/313 (14%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
+ G SEEE RLLH VVVGGGPTG+E++ EL DF+ D+ + Y V + + VTL+EA
Sbjct: 291 IKGQSEEEIDRLLHMVVVGGGPTGIEYAAELRDFVESDLIRWYPEVANKLRVTLVEALPN 350
Query: 62 ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGTEVPYGLLVWSTG 116
IL F L Y + ++ + L + +VKDVD + +++ + ++PYGLLVW+ G
Sbjct: 351 ILPMFSQTLIKYTESTFKENSIDILTKHMVKDVDDRDVLVKTPSGEEKKIPYGLLVWAAG 410
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPAL 171
L + L LP+S R G +D+ +R+ +D +FA+GD + T
Sbjct: 411 NTARPLTRQLMAALPESQKNRRGLDVDDHMRLKGAEDSIFALGDATA-------TQFAPT 463
Query: 172 AQVAERQGKYLFSLLNRIG-------KAGGGRANSAKDMELG------------DPFVYR 212
AQ A +QG YL + N++ K + +A EL PF Y
Sbjct: 464 AQAASQQGAYLARVFNQLARLHILEDKLEAAKKANADASELSGLERQIEKAAKIRPFKYS 523
Query: 213 HLGSMATIGRYKALVD---LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVN 269
H GS+A IG +A+ D L N+ + G G ++++ WRSAY++ + S RNR VA +
Sbjct: 524 HQGSLAYIGSERAIADIPLLGNNQIASG----GVVTFMFWRSAYMSMLFSLRNRSLVAAD 579
Query: 270 WATTFVFGRDISR 282
W F+FGRD+SR
Sbjct: 580 WFKVFLFGRDVSR 592
>gi|388854124|emb|CCF52274.1| probable NDE1-mitochondrial cytosolically directed NADH
dehydrogenase [Ustilago hordei]
Length = 595
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 167/313 (53%), Gaps = 44/313 (14%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
+ G S+EE RLLH VVVGGGPTG+E++ EL DF+ D+ + Y V + + VTLIEA
Sbjct: 293 IKGQSDEEIDRLLHMVVVGGGPTGIEYAAELRDFVESDLIRWYPEVANKLRVTLIEALPN 352
Query: 62 ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT----EVPYGLLVWSTG 116
IL F L Y + ++ + L + +VKDVD + +++ + ++PYGLLVW+ G
Sbjct: 353 ILPMFSQTLIKYTESTFKENSIDILTKHMVKDVDDRDVLVKTPSGQEKKIPYGLLVWAAG 412
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPAL 171
L + L LP++ R G +D+ +R+ +D +FA+GD + T
Sbjct: 413 NTARPLTRQLMSALPEAQKNRRGLEVDDHMRLKGAEDSIFALGDATA-------TQFAPT 465
Query: 172 AQVAERQGKYLFSLLNRIGKAG-------GGRANSAKDMELG------------DPFVYR 212
AQ A +QG YL + N++ + + N+A EL PF Y
Sbjct: 466 AQAASQQGAYLARVFNQLARLHLLEHRLEAAKKNNADASELNGLERQIEKAAKVRPFKYT 525
Query: 213 HLGSMATIGRYKALVD---LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVN 269
H GS+A IG KA+ D L N+ + G G ++++ WRSAY++ + S RNR VA +
Sbjct: 526 HQGSLAYIGSEKAIADIPLLGNNQIASG----GVVTFMFWRSAYVSMLFSLRNRSLVAAD 581
Query: 270 WATTFVFGRDISR 282
W F+FGRD+SR
Sbjct: 582 WFKVFLFGRDVSR 594
>gi|392560322|gb|EIW53505.1| FAD/NAD-P-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 481
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 160/289 (55%), Gaps = 24/289 (8%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
I++ ++ +LL+ +VGGGPTGVEF+ EL DF+ D+ + Y + + L + A IL
Sbjct: 206 ITDADRRKLLNFCIVGGGPTGVEFAAELHDFLHTDIARHYPALARMAKINLYDVAPSILG 265
Query: 65 SFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
FD L+ YAT++ + G+RL+ + V+ V+ ++++ + EV +GLLVWSTG+ P+ L+
Sbjct: 266 GFDTGLQEYATSKFKREGIRLLTQHHVQRVEQGRMLVTEEGEVNFGLLVWSTGLAPNPLI 325
Query: 124 KSLDLPKS---------PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
S+ K G + + DVFA+GD + ++ LPA AQV
Sbjct: 326 DSITEAKKDERTKRTLITDGHLNVVLKDTDAVDPDVFAIGDAATVVDEP----LPATAQV 381
Query: 175 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 234
A +Q KYL LN + + R S PF +++ GS+A +G ++A+ D +
Sbjct: 382 ANQQAKYLTRRLNALVR---DRTPSKA------PFKFQNAGSLAYVGDWEAVFDRTKAAR 432
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G L+WL+WRSAY T+ +SWRN+ V + W ++FGRD+SR
Sbjct: 433 GPKNKETGRLAWLLWRSAYFTKTLSWRNKILVPMYWFLNWIFGRDLSRF 481
>gi|392576735|gb|EIW69865.1| hypothetical protein TREMEDRAFT_43521 [Tremella mesenterica DSM
1558]
Length = 575
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/308 (35%), Positives = 162/308 (52%), Gaps = 45/308 (14%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
E E RL+H +VVGGGPTGVE++GEL DF++ D+++ Y V D + +TLIEA +L +F
Sbjct: 279 EAEVDRLMHMIVVGGGPTGVEYAGELHDFLIDDLKKWYPEVADRLRITLIEALPNVLPAF 338
Query: 67 DDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPST 121
+L Y + ++ + L R +VKDV + +I+ D EVPYGLLVW+TG
Sbjct: 339 SKQLIQYTESTFKENKIDVLTRTMVKDVTDKSVIVQDANKETREVPYGLLVWATGNTSRQ 398
Query: 122 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
+ ++L LP + R G +D++L + Q ++A+GDC+ T AQVA +
Sbjct: 399 ITRNLMTKLPAAQTQRRGLLVDDYLCMLGTQGIYALGDCTA-------TQYAPTAQVASQ 451
Query: 178 QGKYLFSLLNRIGKAGG-----------------------GRANSAKDMELGDPFVYRHL 214
+G YL + ++IG+ + N A PF Y H
Sbjct: 452 EGIYLAQMFSKIGQKNKLERQLAELRASPNAVAEEVEAVVKKLNRASKQT---PFHYSHQ 508
Query: 215 GSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
GS+A IG KA+ DL + + G + L WRSAY++ + S RNR V +WA
Sbjct: 509 GSLAYIGSEKAIADL--PFFNGNFASGGGAAMLFWRSAYISTLYSVRNRTLVMADWAKVK 566
Query: 275 VFGRDISR 282
+FGRD+SR
Sbjct: 567 LFGRDVSR 574
>gi|219117515|ref|XP_002179552.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409443|gb|EEC49375.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 654
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 164/337 (48%), Gaps = 62/337 (18%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE- 61
L G+S+EE+ R L V+G GPTG+EF+ EL DF+ D + Y + Y+ + +IEA+
Sbjct: 324 LPGLSDEERIRNLTFAVIGAGPTGIEFAAELRDFVEEDGPKYYPKLLQYVRIKVIEASPM 383
Query: 62 ILSSFDDRLRHYATTQLSKSGV------------------RLVRGIVKDVDSQKLILNDG 103
+L+ FD L+ A QL + + L+ VK+V +++LN+G
Sbjct: 384 VLAPFDKELQQEAIAQLKRPTMISDPKVAKLLPPNFQMTELLLEASVKEVKEDRILLNNG 443
Query: 104 TEVPYGLLVWSTGVGPSTLVKSLDLPKSPG-----------GRIGIDEWLRVPSVQ-DVF 151
E+PYG+ VW+ G GP L +L L +S G GR+ +D W+R Q V
Sbjct: 444 QEIPYGIAVWAAGNGPIPL--TLQLIESLGDEQASAQAVARGRVAVDCWMRAIGGQGKVL 501
Query: 152 AVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI----------GKAGGGRANSAK 201
+ GDCS + LPA AQVA +QG+YL LLN+ G R + A+
Sbjct: 502 SFGDCSCMFQQQ----LPATAQVASQQGEYLAKLLNKKFEFTPALTEDGIFPPPRKDPAR 557
Query: 202 ---------------DMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
+ E PF + +LG +A G AL + + + G L
Sbjct: 558 TQTSFSDAIAAFASNNYEYAKPFQFLNLGILAYTGGGSALAQVTPVPDGASVQGKGKLGN 617
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+WRS YLT+ VSWRNR V +W +FGRDI+R+
Sbjct: 618 ALWRSVYLTKQVSWRNRLLVMNDWTKRRLFGRDITRL 654
>gi|384248975|gb|EIE22458.1| FAD/NAD(P)-binding domain-containing protein [Coccomyxa
subellipsoidea C-169]
Length = 624
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 167/318 (52%), Gaps = 45/318 (14%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L G EE++ R L +VVGGGPTGVEF+G L DF+ D+ ++Y + + V L++ A
Sbjct: 311 LPGTPEEDRKRALRFIVVGGGPTGVEFAGTLRDFVRGDLARKYPELMGDVEVVLLQSAQS 370
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL---VRGIVKDVDSQKL------------ILNDGTEV 106
IL+ F L+ A K+GV + VR + D +L +L G +
Sbjct: 371 ILTQFSAGLQQRALDTFRKTGVSVRTGVRVVAITQDQARLYYRPFSQHLQGVVLEGGERL 430
Query: 107 PYGLLVWSTGVGPSTLVKSL--DLP--------KSP-GGRIGIDEWLRVPSVQDVFAVGD 155
YG+ VWSTG LV+++ +P ++P ++ +D +LR+ V+D A+GD
Sbjct: 431 DYGVCVWSTGNAARPLVQAVAGAVPVQREALAGRNPAAAKLTVDPFLRIAGVRDAIALGD 490
Query: 156 CSGYLESTGKTVLPALAQVAERQGKYLFSLLN---RIGKAGGGRANSAKDME-------- 204
CS LPA AQVA +QG Y+ ++N R+G G +A A+ E
Sbjct: 491 CS----RLSGAPLPATAQVAGQQGAYVARMINKGYRLGTGGLDKAFPARWKEGSASEEVE 546
Query: 205 -LGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF + LG MA +G +A+ L K S SLAG+LS+L+WRS Y+T+ VS RNR
Sbjct: 547 YFEKPFAFLSLGLMAYVGSDQAITQLEAGKAS--FSLAGYLSFLLWRSVYITKQVSTRNR 604
Query: 264 FYVAVNWATTFVFGRDIS 281
+ +W T VFGRD+S
Sbjct: 605 ILILFDWVKTRVFGRDLS 622
>gi|388852031|emb|CCF54387.1| related to NDE1-mitochondrial cytosolically directed NADH
dehydrogenase [Ustilago hordei]
Length = 577
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 167/328 (50%), Gaps = 61/328 (18%)
Query: 7 SEEEKSR-LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILS 64
SE + R LL +VVGGGPTG EF+ EL D I +D+ + Y + Y + L++A + ILS
Sbjct: 260 SEASEMRDLLSFIVVGGGPTGSEFAAELHDLIKQDLSRLYPRLGPYASIKLLDAGSTILS 319
Query: 65 SFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
SFD L +A + ++ G+ +V + V+ + L+ G + G++VWSTG+ S L+
Sbjct: 320 SFDSSLSEFAMRKFARDGIEVVLNAKISRVERDAVYLHGGERIAAGMVVWSTGITTSPLI 379
Query: 124 KSLD----------LPKSP----------------GGRIGIDEWLRVPSVQ--------- 148
++L+ + SP GG + + P Q
Sbjct: 380 EALEGVGKEERSGKILTSPTLNILAHRQAVEKGAVGGSVLNHKPNCKPESQAEKEELVPL 439
Query: 149 -DVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR------------IGKAGGG 195
+VFA+GDCS L+ T LPA AQVA ++G YL +L N+ I GG
Sbjct: 440 PNVFALGDCSSILD----TPLPATAQVASQKGNYLANLFNKHMVTSQPQPLASINGFGGL 495
Query: 196 RANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLT 255
+ S+ + +PF + GSMA+IG +AL+D KES G L+W++WRSAY
Sbjct: 496 KNGSSATLAQANPFKFLDKGSMASIGSKQALLDTPVKKES------GRLAWVLWRSAYTL 549
Query: 256 RVVSWRNRFYVAVNWATTFVFGRDISRI 283
+SWRN F V NWA+ +FGRD+ R
Sbjct: 550 MSMSWRNCFLVPANWASNLLFGRDVGRF 577
>gi|213408999|ref|XP_002175270.1| external NADH-ubiquinone oxidoreductase [Schizosaccharomyces
japonicus yFS275]
gi|212003317|gb|EEB08977.1| external NADH-ubiquinone oxidoreductase [Schizosaccharomyces
japonicus yFS275]
Length = 573
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 165/317 (52%), Gaps = 42/317 (13%)
Query: 2 FLAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN- 60
F +S+++ RL H VVVGGGPTG EF+ E+ DFI D+++ Y V ++HV+LIEA+
Sbjct: 264 FNKALSKDDVDRLSHIVVVGGGPTGAEFAAEMQDFIDEDIQECYPDVHPHLHVSLIEASP 323
Query: 61 EILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN--------DGTEVPYGLL 111
IL+ F L Y K ++ + + +VKDV L + +++PYGLL
Sbjct: 324 NILAMFTKSLIDYTRALFKKMHIKVMTKAVVKDVSKDSLAVEFVNAAGGKSISQIPYGLL 383
Query: 112 VWSTGVG--PSTLVKSLDLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTV 167
VW+ G+ P T+ +P+ G R G +DE+L V + DV+A+GDC+ +
Sbjct: 384 VWAAGIKARPITMQMISTVPEQKGARKGLLVDEYLAVKGMSDVYAIGDCAF-------SG 436
Query: 168 LPALAQVAERQGKYLFSLLNRIGKAGGGRAN-----------------SAKDMEL----G 206
L A AQVA +QG+ L LN + K + +A + EL
Sbjct: 437 LAATAQVAHQQGEALAINLNVLAKQDSLQRELESLHRISHSEKVDDRIAAIENELLHMSV 496
Query: 207 DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYV 266
PF YRH G++A IG KA+ ++ K + ++G L++ WR YL ++S + R V
Sbjct: 497 KPFAYRHQGALAYIGDDKAVAEMHLPFMKKTIPISGTLTYYFWRMVYLFELISTKTRVSV 556
Query: 267 AVNWATTFVFGRDISRI 283
NW TT +FGR ++ +
Sbjct: 557 LFNWLTTRLFGRSLTNL 573
>gi|443894758|dbj|GAC72105.1| NADH-dehydrogenase [Pseudozyma antarctica T-34]
Length = 589
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 112/313 (35%), Positives = 165/313 (52%), Gaps = 44/313 (14%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
+ G SEEE RLLH VVVGGGPTG+E++ EL DF+ D+ + Y V + + VTL+EA
Sbjct: 287 IKGQSEEEIDRLLHMVVVGGGPTGIEYAAELRDFVESDLIRWYPEVANKLRVTLVEALPN 346
Query: 62 ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGTEVPYGLLVWSTG 116
IL F L Y + ++ + L + +VKDVD + +++ + ++PYGLLVW+ G
Sbjct: 347 ILPMFSQTLIKYTESTFKENSIDILTKHMVKDVDERDVLVKTPSGEEKKIPYGLLVWAAG 406
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPAL 171
L + L LP+ R G +D+ +R+ +D VFA+GD + T
Sbjct: 407 NTARPLTRQLMAALPEHQKNRRGLEVDDHMRLKGAEDSVFALGDATA-------THFAPT 459
Query: 172 AQVAERQGKYLFSLLNRIG------------KAGGGRANSAKDMELG-------DPFVYR 212
AQ A +QG YL + N++ K G A+ +E PF Y
Sbjct: 460 AQAASQQGAYLARVFNQLARLQVLEDKLAASKKAGADASELSGIERQIEKAAKIRPFKYS 519
Query: 213 HLGSMATIGRYKALVD---LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVN 269
H GS+A IG KA+ D L N+ + G G ++++ WRSAY++ + S RNR VA +
Sbjct: 520 HQGSLAYIGSEKAIADIPLLGNNQIASG----GVVTFMFWRSAYVSMLFSLRNRSLVAAD 575
Query: 270 WATTFVFGRDISR 282
W F+FGRD+SR
Sbjct: 576 WFKVFLFGRDVSR 588
>gi|296419737|ref|XP_002839448.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635609|emb|CAZ83639.1| unnamed protein product [Tuber melanosporum]
Length = 485
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 112/299 (37%), Positives = 160/299 (53%), Gaps = 29/299 (9%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L SE K +LLH VVGGGPTG+EFS EL D + D+ + Y + Y +T+ + A
Sbjct: 198 LPTASEARKKQLLHFAVVGGGPTGIEFSAELHDLLSDDLTKLYPSLAKYHRITVYDVAPR 257
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120
ILS FD L YA S+ + + V V+S+ + + EV G +VWSTG+ P+
Sbjct: 258 ILSMFDTSLAKYAEKVFSRQKISIKTSHHVHKVNSEAVHTREDGEVLVGCVVWSTGLAPN 317
Query: 121 T-LVKSLD---LPKSPGGRIGIDEWLRVPSVQ----------DVFAVGDCSGYLESTGKT 166
L K+L G +I +D+ LR S+ DVFA+GDC+ S G
Sbjct: 318 PFLAKALKGKLQMDERGSKIVVDDHLRASSMDERGSTSWPLDDVFAIGDCA----SLGGQ 373
Query: 167 VLPALAQVAERQGKYLFSLLNR--IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYK 224
LPA AQVA +Q +L LN+ + KA G+ K ++ F +R LG MA +G ++
Sbjct: 374 ELPATAQVANQQAIWLGKTLNKAAVRKAAEGKPGPVK-VQDEKKFRFRSLGIMAYLGGWR 432
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
A+ +S L G ++W++WR+AYLT+ VSWRNR + W T +V GRDI+R
Sbjct: 433 AIT------QSGSAELKGRMAWVLWRTAYLTKSVSWRNRILIPTLWFTNWVMGRDINRF 485
>gi|19115108|ref|NP_594196.1| NADH dehydrogenase (predicted) [Schizosaccharomyces pombe 972h-]
gi|74675950|sp|O14121.1|NDH1_SCHPO RecName: Full=Probable NADH-ubiquinone oxidoreductase C3A11.07,
mitochondrial; Flags: Precursor
gi|2414635|emb|CAB16382.1| NADH dehydrogenase (predicted) [Schizosaccharomyces pombe]
Length = 551
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/313 (33%), Positives = 162/313 (51%), Gaps = 42/313 (13%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILS 64
+ E + R +H VVVGGGPTG+EF+GE++DFI D++ Y + D VTL+EA +L
Sbjct: 246 LPAETRRRYVHTVVVGGGPTGMEFAGEMADFIEDDLKSWYPELADDFAVTLVEALPSVLP 305
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGTE----VPYGLLVWST 115
F +LR Y + S +++ +K V ++ + + DG++ +PYGLLVW+
Sbjct: 306 MFSAKLRDYTQSLFDSSHIKIRTNTALKKVTAENIHVEVKNPDGSKQEEVIPYGLLVWAG 365
Query: 116 GVGPSTLVKSL-DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
G L K L + + R G +DE+L++ +D+FA+GDC+ T A
Sbjct: 366 GNRARPLTKKLMEGSEEQNNRRGLVVDEYLKLKGYKDIFALGDCT-------HTAYAPTA 418
Query: 173 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----------------------PFV 210
QVA +QG YL L N++G + + + + LGD PF
Sbjct: 419 QVASQQGAYLGQLFNKLGSLNFEKPSEDRHIALGDEMDSSTLISLANEKHASTKVFLPFK 478
Query: 211 YRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
Y H GS+A +G KA+ D+ K L +G L++ WRS YL+ + S RNR V ++W
Sbjct: 479 YSHQGSLAYVGHEKAIADIEVPWFGKQLHASGALAFYFWRSVYLSELYSLRNRTNVTLDW 538
Query: 271 ATTFVFGRDISRI 283
+FGRDIS +
Sbjct: 539 IRVKLFGRDISSL 551
>gi|389746284|gb|EIM87464.1| FAD/NAD-P-binding domain-containing protein [Stereum hirsutum
FP-91666 SS1]
Length = 475
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 159/289 (55%), Gaps = 25/289 (8%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
+++ ++ LLH +VGGGPTGVEF+ EL D + D+ + Y ++ + ++L + A IL
Sbjct: 201 LTDVQRRNLLHFAIVGGGPTGVEFAAELHDLLHTDIAKHYPNLARFAKISLYDVAPNILG 260
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
SFD L YA + + G+ L+ V+ V+S ++ + + EVP+GLLVWSTG+ P+ L+
Sbjct: 261 SFDSGLAEYAEKKFKRDGITLMTSHHVERVESGRMFIKEKGEVPFGLLVWSTGLAPNPLI 320
Query: 124 KSL---DLPKSPG-GRIGIDEWLRVPSVQ-----DVFAVGDCSGYLESTGKTVLPALAQV 174
+++ + K P G + D+ L + DV+ +GD + +E LPA AQV
Sbjct: 321 ETISPEEYKKHPKTGSLFTDDNLNILRADGTPDPDVWGIGD-AAMIEGVA---LPATAQV 376
Query: 175 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 234
A ++ YL LN I KD E PF + + G++A +G +KA+ D +
Sbjct: 377 ANQKAMYLHKKLNTI----------VKDKEHITPFEFHNKGTLAYLGDWKAIYDRSHAES 426
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G ++WL+WRSAY T VS RN+ + + W ++FGRD++R
Sbjct: 427 GPQTKETGRIAWLLWRSAYFTMTVSLRNKILIPIYWFLNWIFGRDLTRF 475
>gi|336385745|gb|EGO26892.1| hypothetical protein SERLADRAFT_464474 [Serpula lacrymans var.
lacrymans S7.9]
Length = 478
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/287 (36%), Positives = 159/287 (55%), Gaps = 23/287 (8%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
IS+ E+ RLL+ +VGGGPTGVEF+ EL D + ++ + Y + +TL + A IL
Sbjct: 206 ISDVERRRLLNFCIVGGGPTGVEFAAELHDLLHAEIEKHYPSLARMAKITLYDVAPNILG 265
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+FD L YA + + G+ + R V+ V+ K+ + + EVP+GLLVWSTG+ P+ L+
Sbjct: 266 NFDKSLGVYAVDKFQRDGISIKTRHHVERVEKDKMFVKEQGEVPFGLLVWSTGLAPNPLI 325
Query: 124 KSL-DLPKSPGGR-IGIDEWLRV-----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
+S+ ++ K + + DE L V +V+A+GD S + LPA AQVA
Sbjct: 326 QSIKEVSKDEKTQSLLTDEQLNVIKQDGTPDPNVWAIGDASVIPNAR----LPATAQVAN 381
Query: 177 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
++ KYL LN+I KD E PF + LGSMA +G +KA+ D
Sbjct: 382 QKAKYLVKKLNKI----------VKDQEHTKPFEFLDLGSMAYLGDWKAIYDRSGADTGI 431
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+G L+WL+WRSAY T +S RN+ V ++ ++FGRD++R
Sbjct: 432 KTKESGRLAWLLWRSAYFTMTLSLRNKILVPMHRFMNWIFGRDLTRF 478
>gi|343429144|emb|CBQ72718.1| probable NDE1-mitochondrial cytosolically directed NADH
dehydrogenase [Sporisorium reilianum SRZ2]
Length = 592
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 110/313 (35%), Positives = 164/313 (52%), Gaps = 44/313 (14%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
+ G SEEE RLLH VVVGGGPTG+E++ EL DF+ D+ + Y V + + VTLIEA
Sbjct: 290 IKGQSEEEIDRLLHMVVVGGGPTGIEYAAELRDFVESDLIRWYPEVANKLRVTLIEALPS 349
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILN----DGTEVPYGLLVWSTG 116
IL F L Y + ++ + L+ + +VKDVD + +++ + ++PYGLLVW+ G
Sbjct: 350 ILPMFSQTLIKYTESTFKENSIDLLTKHMVKDVDERDVLVKTPSGEDKKIPYGLLVWAAG 409
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPAL 171
L + L LP+S R G +D+ +R+ +D +FA+GD + T
Sbjct: 410 NTARPLTRQLMGALPESQKNRRGLEVDDHMRLKGAEDSIFALGDATA-------TQFAPT 462
Query: 172 AQVAERQGKYLFSLLNRIGKAG-------------------GGRANSAKDMELGDPFVYR 212
AQ A +QG YL + N++ + G + PF Y
Sbjct: 463 AQAASQQGAYLARVFNQLARLNVLETKLADAKKANADASELSGLERQIEKAAKIRPFKYS 522
Query: 213 HLGSMATIGRYKALVD---LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVN 269
H GS+A IG KA+ D L N+ + G G ++++ WRSAY++ + S RNR VA +
Sbjct: 523 HQGSLAYIGSEKAIADIPLLGNNQIASG----GVVTFMFWRSAYVSMLFSLRNRSLVAAD 578
Query: 270 WATTFVFGRDISR 282
W F+FGRD+SR
Sbjct: 579 WFKVFLFGRDVSR 591
>gi|395329446|gb|EJF61833.1| FAD/NAD(P)-binding domain-containing protein [Dichomitus squalens
LYAD-421 SS1]
Length = 491
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 163/289 (56%), Gaps = 19/289 (6%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
I++ ++ +LL+ VVGGGPTGVEF+ EL D + D+ + Y + + L + A IL
Sbjct: 211 ITDADRRKLLNFCVVGGGPTGVEFAAELHDLLHTDMSRHYPQLARMARINLYDVAPTILG 270
Query: 65 SFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
FD+ L+ YA ++ + G+RL+ + V+ V+ ++ + + EV +GLLVWSTG+ P+ L+
Sbjct: 271 GFDEGLQKYAESKFRREGIRLLTQHHVERVEEGRMFVTEEGEVHFGLLVWSTGLAPNPLI 330
Query: 124 KSLDLPKS---PGGRIGIDEWLRV------PSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
+S+ K + DE L V DVFA+GD + + + LPA AQV
Sbjct: 331 QSITEAKKDERTKRSLITDEHLNVVMKDTNAPDPDVFAIGDAATIGD---EPPLPATAQV 387
Query: 175 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 234
A +Q KY+ LN++ K+ G + + PF +++ GS+A +G ++A+ D +
Sbjct: 388 ANQQAKYITKRLNKLIKSSTGVLGADEK-----PFKFQNAGSLAYVGDWEAIFDRTRAAS 442
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G ++WL+WRSAY T+ +S RN+ V V W ++FGRD+SR
Sbjct: 443 GPKNKETGRVAWLLWRSAYFTKTLSVRNKILVPVYWFLNWIFGRDLSRF 491
>gi|449016035|dbj|BAM79437.1| NADH dehydrogenase type II [Cyanidioschyzon merolae strain 10D]
Length = 628
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 163/300 (54%), Gaps = 30/300 (10%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE- 61
L S+EE+SRLLH VVVGGGPTGVEF+GEL DF++ D + Y + Y+ VTL+++ +
Sbjct: 340 LPETSDEERSRLLHFVVVGGGPTGVEFAGELHDFLVEDAVKYYKKLLKYVQVTLLQSGQS 399
Query: 62 ILSSFDDRLRHYATTQLS------KSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWST 115
IL+ FD L+ A L ++G R+VR + ++ L DG +PYG+ VW+
Sbjct: 400 ILTQFDKSLQDRALQNLRDAEINVRTGSRVVR-----ITETEIYLQDGAVIPYGMCVWAA 454
Query: 116 GVGPSTLVKSL--DLPKSPGGR---IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA 170
GVGP LV L +P + + +D+WLRV + VFA GDC+ L LPA
Sbjct: 455 GVGPQKLVTDLIESIPAQTTFKKRQLVVDDWLRVIGAEGVFAAGDCATNLHEP----LPA 510
Query: 171 LAQVAERQGKYLFSLLNR-------IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRY 223
AQVA +QG YL LLNR I + PF + G +A IGR
Sbjct: 511 TAQVAGQQGAYLARLLNREYCLDCDIPERTEYTRTWIDRARFAKPFQFLSFGLLAYIGRE 570
Query: 224 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+A+ + S + L+G L++L+WRS Y + VS RNR + +W +FGRDIS+
Sbjct: 571 RAMAQIEMGDTS--VKLSGTLTYLIWRSVYAVKQVSMRNRILITFDWIKAAIFGRDISQF 628
>gi|392590356|gb|EIW79685.1| FAD/NAD(P)-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 477
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 103/287 (35%), Positives = 156/287 (54%), Gaps = 23/287 (8%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
+S+ ++ LL+ VVGGGPTGVEF+ EL D + ++ + Y + +T+ + A IL
Sbjct: 205 VSDIQRRNLLNFCVVGGGPTGVEFAAELHDLLHEEMERYYPSLARLAKITVYDVAPSILG 264
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
SFD L YA + + G+ + R V+ V+ K+ + + EVP+GLLVWSTG+ P+ LV
Sbjct: 265 SFDKSLGSYAERKFRRDGIAIKTRHHVERVEKAKMFVKEQGEVPFGLLVWSTGLAPNPLV 324
Query: 124 KSLDLPKSPGGRIGI--DEWLRVPSVQ-----DVFAVGDCSGYLESTGKTVLPALAQVAE 176
+S+ + + D L V + DV+A+GD + ++ VLPA AQVA
Sbjct: 325 QSISAMQKHEKTQSLLTDNQLNVLTADGQPDPDVWAIGDAAIIKDA----VLPATAQVAN 380
Query: 177 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
++ KY+ LN+I KD E PF + + GS+A +G +KA+ D +
Sbjct: 381 QKAKYMVKKLNKI----------VKDKEHEAPFEFHNQGSLAYLGDWKAIYDASNAESGI 430
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G L+WL+WRSAY T +S RN+ V W ++FGRDISR
Sbjct: 431 RGKETGHLAWLLWRSAYFTMTLSVRNKILVPTYWFLNWIFGRDISRF 477
>gi|71005786|ref|XP_757559.1| hypothetical protein UM01412.1 [Ustilago maydis 521]
gi|46096513|gb|EAK81746.1| hypothetical protein UM01412.1 [Ustilago maydis 521]
Length = 512
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 164/314 (52%), Gaps = 53/314 (16%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
E + RLL VVVGGGPTG EF+ EL D I ++ + Y +V Y V L++A + ILSSF
Sbjct: 214 EHQLRRLLSFVVVGGGPTGSEFAAELHDLINDELSRLYPNVCAYATVRLLDAGSTILSSF 273
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG----TEVPYGLLVWSTGVGPST 121
D RL YA + ++ G+++ + ++ V+ ++L+ + G+++WSTG+ S
Sbjct: 274 DARLAEYAINKFARDGIQVQLNAKIRRVERDAVVLDSAGGHQERIAAGMVIWSTGITTSP 333
Query: 122 LVK------------------SLDL---PKSPGGRIGI------DEWLRVPS-----VQD 149
L++ +L+L P P + D + PS + +
Sbjct: 334 LIQAFRGVAKQDRTGKLLTNHTLNLVIHPSHPNPGANVLNPAADDSHMGSPSQPPTPLDN 393
Query: 150 VFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPF 209
VFA+GDCS ++ LPA AQVA +QG YL L N + + S++ PF
Sbjct: 394 VFALGDCSASPDA-----LPATAQVASQQGTYLAHLFNSHLASASPSSRSSQP----KPF 444
Query: 210 VYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVN 269
V+ GSMA+IG AL+D K+S G L+WL+WRSAY +SWRNRF V N
Sbjct: 445 VFHDKGSMASIGSRSALIDSPVKKDS------GTLAWLLWRSAYTIMAMSWRNRFLVPAN 498
Query: 270 WATTFVFGRDISRI 283
WA+ +FGRD+ R
Sbjct: 499 WASNLLFGRDVGRF 512
>gi|393214664|gb|EJD00157.1| FAD/NAD-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 500
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/288 (34%), Positives = 166/288 (57%), Gaps = 24/288 (8%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY-SHVKDYIHVTLIE-ANEIL 63
+S+ ++ LL+ +VG GPTGVEF+ EL D + D+R+ Y + + L + A+ +L
Sbjct: 227 LSDIDRRNLLNFCIVGAGPTGVEFAAELHDLLKSDIRKYYGEKLTRLARINLYDVADRML 286
Query: 64 SSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
F++ L YA + ++ G+ + +R V+ V+ L + + EVP+G+LVWSTG+ P+ L
Sbjct: 287 GGFEEGLAKYAERKFARDGINIRLRHHVERVEDGVLHVKEQGEVPFGMLVWSTGLAPNPL 346
Query: 123 VKSLDLPKSPG--GRIGIDEWLRVPS-----VQDVFAVGDCSGYLESTGKTVLPALAQVA 175
++S+ + G G + D LRV ++++A+GDC+ + +LPA AQVA
Sbjct: 347 IQSIAEIEKDGKTGSLLTDNHLRVIKKDGSISENIWAIGDCAIIQDE----LLPATAQVA 402
Query: 176 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 235
++ KY+ +LNR+ +D +PF +R+ GS+A +G +KAL D + +
Sbjct: 403 SQKAKYVTRVLNRL----------VRDRPTEEPFQFRNRGSLAYLGDWKALYDRSKVETG 452
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
S G L+WL+WRSAY T+ +S RN+ V W ++FGRDI+R+
Sbjct: 453 PKGSETGRLAWLLWRSAYFTQTLSIRNKITVPYYWFLNWIFGRDITRL 500
>gi|255726764|ref|XP_002548308.1| hypothetical protein CTRG_02605 [Candida tropicalis MYA-3404]
gi|240134232|gb|EER33787.1| hypothetical protein CTRG_02605 [Candida tropicalis MYA-3404]
Length = 569
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 170/305 (55%), Gaps = 38/305 (12%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E+ RLL VV GGGPTGVE +GE+ D+I +D+++ V D + VTL+EA +L++F
Sbjct: 272 DPERKRLLSVVVCGGGPTGVEAAGEIQDYIDQDLKKWVPEVADELTVTLVEALPNVLNTF 331
Query: 67 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILN----DGT----EVPYGLLVWSTGV 117
+ +L Y + + L+ ++K VD +++I N DG+ ++PYGLL+W+TG
Sbjct: 332 NKKLIEYTKEVFKSTNINLMTNTMIKKVDGKEVIANHKNADGSTETIQIPYGLLIWATGN 391
Query: 118 GPST----LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
P L+ +D K+ + +D+ L+V +++A+GDC+ T P AQ
Sbjct: 392 APRNFTHDLISKVDAQKNARRGLLVDQHLKVDGTDNIYALGDCTF-------TKYPPTAQ 444
Query: 174 VAERQGKYLFSLLNRIGKAGG-----GRANSAKD----------MELGDP-FVYRHLGSM 217
VA ++G+YL + +++ + GRA + +E P F+Y + GS+
Sbjct: 445 VAFQEGEYLANYFDKLHQVESLKYTIGRATEQDNVPTLSKKLARLEKNLPHFIYNYQGSL 504
Query: 218 ATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFG 277
A IG KA+ DL S +S G L++L WRSAY+ +S +N+ V ++WA ++FG
Sbjct: 505 AYIGSEKAVADLVWGDWS-NISAGGSLTFLFWRSAYIYMCLSVKNQVLVVLDWAKVYLFG 563
Query: 278 RDISR 282
RD+S+
Sbjct: 564 RDVSK 568
>gi|380477899|emb|CCF43900.1| hypothetical protein CH063_13469 [Colletotrichum higginsianum]
Length = 532
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 169/322 (52%), Gaps = 64/322 (19%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSS 65
++E++ +LLH VVGGGPTG+EF+ EL D I D+ + Y H+ +YI +T+ + A ++L
Sbjct: 230 TDEQRKKLLHFAVVGGGPTGIEFAAELHDLIHDDLSKLYPHLMEYIDITIYDIAPKVLPM 289
Query: 66 FDDRLRHYATTQLSKSGVRL-----VRGIVKDVD----SQKLILND--GTEVPYGLLVWS 114
FD +L YA + G+++ ++ I D D + KL + + EV G++VWS
Sbjct: 290 FDQQLASYAEDLFRRQGIKVKTEHHLQRIRPDEDDALGTLKLKIKEYGDDEVGAGIVVWS 349
Query: 115 TGVGPSTLV-----KSLDLPKSPGGRIG-------------------IDEWLRV----PS 146
TG+ + LV K L P + R G D LRV P+
Sbjct: 350 TGLMQNPLVQTIMKKELRNPNAAAERKGKEETGTVKILKAEKSAGIVTDSCLRVRLDDPA 409
Query: 147 -----VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAK 201
+ DV+++GDCS LE+ LPA AQVA +Q YL LN+ AG G++
Sbjct: 410 DAKAVLPDVYSMGDCS-VLET---ETLPATAQVASQQAVYLAKALNKAAGAGAGQSK--- 462
Query: 202 DMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWR 261
PF +R+LG+MA +G +KA+ +S L G +W++WR AYLT+ +S R
Sbjct: 463 ------PFKFRNLGTMAYLGSWKAI------HQSSADELKGRAAWILWRCAYLTKSMSIR 510
Query: 262 NRFYVAVNWATTFVFGRDISRI 283
N+ V V W T+VFGR ISR
Sbjct: 511 NKILVPVYWFITWVFGRGISRF 532
>gi|299473176|emb|CBN78752.1| NADH dehydrogenase (ubiquinone) [Ectocarpus siliculosus]
Length = 620
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/348 (32%), Positives = 167/348 (47%), Gaps = 75/348 (21%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L ++EE++ L +VG GPTGVE EL DFI + + Y H+ Y+ + LIEA ++
Sbjct: 281 LPTVTEEQRIAALTFAIVGAGPTGVECCAELRDFIEEEGPRFYPHLLKYVRIKLIEASDK 340
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLV--------------RGIVKDVDSQKLILNDGTEVP 107
+LS FD L+ A + L++ +L+ + VK V +L L+DG+ +P
Sbjct: 341 VLSVFDGALQKAAVSSLTERSTKLIDDGFIETEMTEVLLKVGVKAVTGTQLELSDGSNIP 400
Query: 108 YGLLVWSTGVGPSTLVKSLDLPKSPG----------GRIGIDEWLRVPSVQDVFAVGDCS 157
YGL VW+ G GP LV LDL + GR+ D+WLR+ VFA+GDC+
Sbjct: 401 YGLAVWAAGNGPLPLV--LDLIQGVEEQKEKAAWGRGRLVTDDWLRLLGAPSVFALGDCA 458
Query: 158 GYLESTGKTVLPALAQVAERQGKYLFSLLNR----------------------------- 188
LP AQVA +QG YL L +R
Sbjct: 459 ----VINDKPLPQTAQVASQQGTYLARLFSRGFEFSATVPQKNTDNEGVEAAAGGSAASS 514
Query: 189 ------IGKAGGGRANSAKDM-------ELGDPFVYRHLGSMATIGRYKALVDLRQNKES 235
+G+ GG + ++ + + PF + +LG +A G AL ++ KES
Sbjct: 515 DGSDTPLGEDGGEKVPLSEKLGLSIVKGKFAKPFQFLNLGILAYTGAGGALAQVQVGKES 574
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G +L+WRS YL++ VSWRNR V +W T +FGRDI+R+
Sbjct: 575 --VKSTGATGYLLWRSIYLSKQVSWRNRLLVGTDWVKTKIFGRDITRL 620
>gi|326426832|gb|EGD72402.1| hypothetical protein PTSG_00422 [Salpingoeca sp. ATCC 50818]
Length = 502
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 147/267 (55%), Gaps = 29/267 (10%)
Query: 28 EFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSG--VR 84
EF+ EL+DF+ D + Y H++ V L+EA+ +LS+FD LR YA +L + VR
Sbjct: 254 EFAAELTDFLREDCTRLYPHIQHRPRVILLEASGAVLSAFDSSLRQYALRRLERQDCHVR 313
Query: 85 LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD--LPKSPGGRIGIDEWL 142
L R VK+V +++L++G + +VWSTGVGP LVKSLD I +D L
Sbjct: 314 LGRS-VKEVKRHEVVLDNGEVINTHCIVWSTGVGPRALVKSLDERYLTENKQHIRVDRGL 372
Query: 143 RVPSVQDVFAVGDCS---GYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANS 199
++ + Q+ FA GDC+ GY +LPA+AQVAE+QGK+L NR +
Sbjct: 373 KIANTQNAFAYGDCARIDGY-------ILPAVAQVAEQQGKFLADEFNR----------A 415
Query: 200 AKDMELG-DPFVYRHLGSMATIGRYK--ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTR 256
E+G D F + G +A +G Y A + + + + L+G +WLVWR YLT+
Sbjct: 416 TPQREVGCDTFKFASSGMLAYLGHYGGVAKIAVPTPDDVTNVKLSGLTAWLVWRMGYLTK 475
Query: 257 VVSWRNRFYVAVNWATTFVFGRDISRI 283
+ WRNR V +W T +FGRD ++
Sbjct: 476 LGRWRNRLQVPFDWLKTMIFGRDPTKF 502
>gi|343427290|emb|CBQ70818.1| related to NDE1-mitochondrial cytosolically directed NADH
dehydrogenase [Sporisorium reilianum SRZ2]
Length = 507
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 161/313 (51%), Gaps = 54/313 (17%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+E+E RLL VVVGGGPTG EF+ EL D I D+ + Y ++ Y + L++A + ILSS
Sbjct: 213 AEDEVRRLLTFVVVGGGPTGSEFAAELHDLIKADLARLYPKLRAYPSIRLLDAGSTILSS 272
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
FD L YA + ++ G+ + + ++ V+ ++L + G++VWSTG+ S L++
Sbjct: 273 FDAGLAEYAMNKFARDGISVQLHAKIQRVERDAVVLEGEQRIGAGMVVWSTGITTSPLIE 332
Query: 125 SLDL--PKSPGGRIGIDEWLRV---------------PS-----------------VQDV 150
+ + G++ ++ L V PS + V
Sbjct: 333 AFRGVGKEDRTGKVLTNDTLNVLVEQGADTVGGSVLNPSAFESSTADKGEKGELVPLDSV 392
Query: 151 FAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFV 210
FA+GDC+ L T LPA AQVA ++G +L L N + + AK PF
Sbjct: 393 FALGDCASQL----GTPLPATAQVATQKGTFLAHLFN----THLAQPSPAKP----KPFE 440
Query: 211 YRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+ + GSMA+IG KAL+D KES G L+W++WRSAY +SWRNRF V NW
Sbjct: 441 FANKGSMASIGSGKALIDSPVKKES------GALAWILWRSAYTIMSMSWRNRFLVPANW 494
Query: 271 ATTFVFGRDISRI 283
+ VFGRD+ R
Sbjct: 495 VSNVVFGRDVGRF 507
>gi|323450850|gb|EGB06729.1| hypothetical protein AURANDRAFT_10731, partial [Aureococcus
anophagefferens]
Length = 473
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 117/324 (36%), Positives = 163/324 (50%), Gaps = 45/324 (13%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE- 61
L +S+ E+ R L VVG GPTGVEF GEL DF+ + Y + VTL+EA
Sbjct: 150 LPTLSDAERRRALSFAVVGAGPTGVEFCGELLDFLESEALAFYPKLVGEASVTLLEATTT 209
Query: 62 ILSSFDDRLRHYATTQLSKS-------GVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVW 113
+L +FD LR A +L KS GV + G V +V+ ++L +PYGL VW
Sbjct: 210 VLGAFDASLRDVAVGELEKSRNGGGIKGVDIRLGAAVTEVNGTHVLLGGDDPLPYGLCVW 269
Query: 114 STGVGPSTLV----KSLDLPKSPG-------GRIGIDEWLRVPSVQ--DVFAVGDCSGYL 160
+TG GP+ +V K+L + G GR G+D WLRV +VFA+GDC+ +
Sbjct: 270 ATGNGPTRVVTDTLKALGADGAQGDAQAWARGRFGVDAWLRVLGAPPGEVFAIGDCAADV 329
Query: 161 ---ESTGKTVLPALAQVAERQGKYLFSLLN-----RIGKAGGGRANSAKDME-------- 204
+ K LPA AQVA +QG+YL LL + K R A D +
Sbjct: 330 VDFAAETKATLPATAQVAAQQGEYLARLLKLGPDYDLAKPEPSRPRGAADDDRRLDELFC 389
Query: 205 -------LGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRV 257
+ PF + +LG +A +G KAL + G+ AG ++ +WRS Y+++
Sbjct: 390 DERNGHLVARPFQFLNLGILAYVGDGKALAQVALGDGDLGVKAAGRAAFGLWRSVYISKQ 449
Query: 258 VSWRNRFYVAVNWATTFVFGRDIS 281
VS RNR V +W T VFGRDI+
Sbjct: 450 VSPRNRLLVIGDWLRTRVFGRDIT 473
>gi|330799418|ref|XP_003287742.1| hypothetical protein DICPUDRAFT_97816 [Dictyostelium purpureum]
gi|325082251|gb|EGC35739.1| hypothetical protein DICPUDRAFT_97816 [Dictyostelium purpureum]
Length = 453
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 111/283 (39%), Positives = 167/283 (59%), Gaps = 23/283 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN- 60
L +S +E+ RLL VVVGGGPTGVEF+ EL+DF + D+++ + V + + V L+EA+
Sbjct: 188 LPDVSVKERERLLTFVVVGGGPTGVEFTAELNDFFVEDIQRLFPLVNPNEVKVILLEASG 247
Query: 61 EILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+IL++FD+ L SG+ + VK+V + ++L DGT++PYGLLVWSTG+G
Sbjct: 248 KILTAFDESLVKKTLKVFRSSGIDVKTHSPVKEVFDEYVLLADGTKIPYGLLVWSTGIGA 307
Query: 120 STLVKSLDLPKSP-GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 178
+ L+K+ K P GRI +D+ LRV + +++ GDCS +E P AQVA ++
Sbjct: 308 NPLIKNSPFEKDPHTGRILVDKHLRVKNFNNIYCFGDCS-IVEGEN---YPLTAQVASQE 363
Query: 179 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 238
G YL N R + + E F ++ +G +A IG +L ++
Sbjct: 364 GVYLAKEFN-----NKEREHPRQPQE----FKFKFMGLLAYIGNKNSLF------QTPLF 408
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
L+GF+++L WRSAYLTR+ SWR + V ++W T VFGRDIS
Sbjct: 409 DLSGFIAFLTWRSAYLTRLGSWRAKMMVPMDWLRTIVFGRDIS 451
>gi|213404038|ref|XP_002172791.1| external NADH-ubiquinone oxidoreductase [Schizosaccharomyces
japonicus yFS275]
gi|212000838|gb|EEB06498.1| external NADH-ubiquinone oxidoreductase [Schizosaccharomyces
japonicus yFS275]
Length = 499
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 156/294 (53%), Gaps = 49/294 (16%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L G+S EE+ R LH VVVGGGPTG+EFS E+ DFI D+++ Y + D VTL+EA
Sbjct: 242 LPGLSPEERKRYLHTVVVGGGPTGMEFSAEMGDFIRHDLKKWYPDLADDFQVTLLEALPS 301
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL---ILND-----GTEVPYGLLV 112
+L F ++ R YA + SG+ + R +K+ ++L + +D +PYGLLV
Sbjct: 302 VLPMFTEKGRMYAVKHFADSGINIQTRTALKEATKEELHVEVTDDQGNKTKKTIPYGLLV 361
Query: 113 WSTGVGPSTLVKSL--DLPKSPGGR-IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLP 169
W+ G P L +SL LP+ R + ID++++V ++DV+A+GDC+ T
Sbjct: 362 WAGGNKPRQLTQSLISSLPEQTNRRGLMIDDFMQVKGLKDVWAIGDCT-------TTQFA 414
Query: 170 ALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL 229
A AQVAE+QG YL LN++ + + KD+E L
Sbjct: 415 ATAQVAEQQGIYLGQQLNKLARL------TFKDVE-----------------------SL 445
Query: 230 RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+Q + LS G ++ WR+ YL+ + + RNR VA +W +FGRDIS +
Sbjct: 446 QQTPVIQNLSAHGLPAFYFWRATYLSELDTIRNRTNVAFDWMRINMFGRDISSL 499
>gi|68471721|ref|XP_720167.1| potential mitochondrial nonproton-pumping NADH dehydrogenase
[Candida albicans SC5314]
gi|68471982|ref|XP_720034.1| potential mitochondrial nonproton-pumping NADH dehydrogenase
[Candida albicans SC5314]
gi|32812377|emb|CAB77710.2| NADH dehydrogenase [Candida albicans]
gi|46441884|gb|EAL01178.1| potential mitochondrial nonproton-pumping NADH dehydrogenase
[Candida albicans SC5314]
gi|46442022|gb|EAL01315.1| potential mitochondrial nonproton-pumping NADH dehydrogenase
[Candida albicans SC5314]
Length = 574
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 168/305 (55%), Gaps = 38/305 (12%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E+ RLL VV GGGPTGVE +GE+ D+I +D+++ V D + V+L+EA +L++F
Sbjct: 277 DPERKRLLSIVVCGGGPTGVEAAGEIQDYIDQDLKKWVPEVADELKVSLVEALPNVLNTF 336
Query: 67 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILN----DGT----EVPYGLLVWSTGV 117
+ +L Y + + L+ ++K V+ + LI N DG+ E+PYGLL+W+TG
Sbjct: 337 NKKLIDYTKEVFKDTNINLMTNTMIKKVNDKSLIANHKNPDGSTESIEIPYGLLIWATGN 396
Query: 118 GP----STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
P L+ +D K+ + +DE L+V ++FA+GDC+ T P AQ
Sbjct: 397 APRDFTRDLIAKVDEQKNARRGLLVDERLKVDGTDNIFALGDCTF-------TKYPPTAQ 449
Query: 174 VAERQGKYLFSLLNRIGKAGGGR---AN-SAKD-----------MELGDP-FVYRHLGSM 217
VA ++G+YL + +++ + AN + KD +E P F+Y + GS+
Sbjct: 450 VAFQEGEYLANYFDKLHAVESLKYTIANPTPKDNVEKLSRKLARLEKNLPHFIYNYQGSL 509
Query: 218 ATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFG 277
A IG KA+ DL S +S G L++L WRSAY+ +S +N+ V ++WA + FG
Sbjct: 510 AYIGSEKAVADLVWGDWS-NISSGGNLTFLFWRSAYIYMCLSVKNQVLVVLDWAKVYFFG 568
Query: 278 RDISR 282
RD S+
Sbjct: 569 RDCSK 573
>gi|238880749|gb|EEQ44387.1| hypothetical protein CAWG_02654 [Candida albicans WO-1]
Length = 574
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 168/305 (55%), Gaps = 38/305 (12%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E+ RLL VV GGGPTGVE +GE+ D+I +D+++ V D + V+L+EA +L++F
Sbjct: 277 DPERKRLLSIVVCGGGPTGVEAAGEIQDYIDQDLKKWVPEVADELKVSLVEALPNVLNTF 336
Query: 67 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILN----DGT----EVPYGLLVWSTGV 117
+ +L Y + + L+ ++K V+ + LI N DG+ E+PYGLL+W+TG
Sbjct: 337 NKKLIDYTKEVFKDTNINLMTNTMIKKVNDKSLIANHKNPDGSTESIEIPYGLLIWATGN 396
Query: 118 GP----STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
P L+ +D K+ + +DE L+V ++FA+GDC+ T P AQ
Sbjct: 397 APRDFTRDLIAKVDEQKNARRGLLVDERLKVDGTDNIFALGDCTF-------TKYPPTAQ 449
Query: 174 VAERQGKYLFSLLNRIGKAGGGR---AN-SAKD-----------MELGDP-FVYRHLGSM 217
VA ++G+YL + +++ + AN + KD +E P F+Y + GS+
Sbjct: 450 VAFQEGEYLANYFDKLHAVESLKYTIANPTPKDNVEKLSRKLARLEKNLPHFIYNYQGSL 509
Query: 218 ATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFG 277
A IG KA+ DL S +S G L++L WRSAY+ +S +N+ V ++WA + FG
Sbjct: 510 AYIGSEKAVADLVWGDWS-NISSGGNLTFLFWRSAYIYMCLSVKNQVLVVLDWAKVYFFG 568
Query: 278 RDISR 282
RD S+
Sbjct: 569 RDCSK 573
>gi|453081740|gb|EMF09788.1| FAD/NAD(P)-binding domain-containing protein [Mycosphaerella
populorum SO2202]
Length = 514
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 165/310 (53%), Gaps = 52/310 (16%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L SEE K L+ VVGGGPTG+E+S EL D I D+++ Y + Y+ +T+ + AN+
Sbjct: 228 LPTTSEEMKRTYLNFAVVGGGPTGIEWSAELYDMIHEDMKRLYPELIQYVSITVYDVANK 287
Query: 62 ILSSFDDRLRHYATTQLSKSGVR---------LVRGIVKDVDSQKLI----------LND 102
+L FD+ L YA S+ G+ L RG+ K ++ ++ + +
Sbjct: 288 VLGMFDESLSQYAMKTFSRQGIHIKTSHHIEELRRGVPKAQEASSVVKDASHVYTLKVKE 347
Query: 103 GTEVPYGLLVWSTGVGPSTLVKS--LDLPKSP--GGRIGIDEWLRVPS-----VQDVFAV 153
EV G++VWSTG+ + V++ D K G I +E L+V ++DV+A+
Sbjct: 348 EGEVGVGMVVWSTGLLANPFVQNGLQDKVKKHERSGSILTNERLQVKDKNDRPIEDVYAL 407
Query: 154 GDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRH 213
GDC+ LE T PA AQVA ++ +L N+ D+E F Y++
Sbjct: 408 GDCA-ILEGTA---YPATAQVASQKAVWLAKRFNK------------GDIE-SQEFTYKN 450
Query: 214 LGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATT 273
LG MA IG KA++ E KG +++G ++WL+WR AYLT+ VS RN+ + + W+
Sbjct: 451 LGVMAYIGNKKAIL------EGKGANISGRIAWLIWRGAYLTKTVSLRNKILIPIYWSIN 504
Query: 274 FVFGRDISRI 283
++FGRDISR
Sbjct: 505 WIFGRDISRF 514
>gi|241953089|ref|XP_002419266.1| mitochondrial external NADH-ubiquinone oxidoreductase precursor,
putative [Candida dubliniensis CD36]
gi|223642606|emb|CAX42856.1| mitochondrial external NADH-ubiquinone oxidoreductase precursor,
putative [Candida dubliniensis CD36]
Length = 574
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/305 (34%), Positives = 166/305 (54%), Gaps = 38/305 (12%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E+ RLL VV GGGPTGVE +GE+ D+I +D+++ V D + V+L+EA +L++F
Sbjct: 277 DPERKRLLSIVVCGGGPTGVEAAGEIQDYIDQDLKKWVPEVADELKVSLVEALPNVLNTF 336
Query: 67 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILN----DGT----EVPYGLLVWSTGV 117
+ +L Y + + L+ ++K V+ + LI N DG+ E+PYGLL+W+TG
Sbjct: 337 NKKLIEYTKEVFKDTNINLMTNTMIKKVNDKSLIANHKNPDGSTETIEIPYGLLIWATGN 396
Query: 118 GPST----LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
P L+ +D K+ + +DE L+V ++FA+GDC+ T P AQ
Sbjct: 397 APRNFTRDLISKVDEQKNARRGLLVDERLKVDGTDNIFALGDCTF-------TKYPPTAQ 449
Query: 174 VAERQGKYL---FSLLNRIGKAGGGRAN-SAKD-----------MELGDP-FVYRHLGSM 217
VA ++G+YL F L+ + AN + KD +E P F+Y + GS+
Sbjct: 450 VAFQEGEYLANYFDKLHAVESLKYTIANPTPKDNVEKLSRKLARLEKNLPHFIYNYQGSL 509
Query: 218 ATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFG 277
A IG KA+ DL S +S G ++L WRSAY+ +S +N+ V ++WA + FG
Sbjct: 510 AYIGSEKAVADLVWGDWS-NISSGGSFTFLFWRSAYIYMCLSVKNQVLVVLDWAKVYFFG 568
Query: 278 RDISR 282
RD S+
Sbjct: 569 RDCSK 573
>gi|299472684|emb|CBN78336.1| NADH dehydrogenase (ubiquinone) [Ectocarpus siliculosus]
Length = 638
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 161/312 (51%), Gaps = 35/312 (11%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62
L G+++EEK +LL VV+G GPTGVEF+GEL+D I DV + + + I++T++ + ++
Sbjct: 331 LPGVTDEEKRKLLSFVVIGAGPTGVEFTGELTDLIGNDVPRLFPELVGLINLTVVSSGKV 390
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPST 121
L F++ L+ L G+ ++ G +V ++++L +G +PYGL W+ G
Sbjct: 391 LPMFEEVLQDRGLNLLQSQGIEILLGSAASEVTKEEVVLKNGKRIPYGLCFWAGGTEARP 450
Query: 122 LVKSL---------DLPKSPGGRIGIDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPAL 171
L +SL D S G+I +D ++R + A+GD S S +P
Sbjct: 451 LTQSLIETIGPEQTDASGSKRGQITVDGYMRALGTNGTILALGDAS----SIQGVKMPTT 506
Query: 172 AQVAERQGKYLFSLLNR-------IGKAGGGRANS-AKDMEL------------GDPFVY 211
QVA ++G Y+ LLNR G NS A ME PF +
Sbjct: 507 GQVAAQEGAYVARLLNRGYDTSVEAAPTMTGYDNSTAGQMEKAVDFFRLRGRLSASPFHF 566
Query: 212 RHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA 271
+LG +A IG +A+ +++ K++ L AG + +WRS Y+ + VS RNR VAV+W
Sbjct: 567 INLGVLAYIGMGQAVAEVKVGKDTPVLDAAGKAGFFLWRSTYVVKQVSPRNRINVAVDWL 626
Query: 272 TTFVFGRDISRI 283
FGRDI+R+
Sbjct: 627 KVRFFGRDITRL 638
>gi|422294837|gb|EKU22137.1| NADH dehydrogenase [Nannochloropsis gaditana CCMP526]
Length = 403
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 144/263 (54%), Gaps = 42/263 (15%)
Query: 32 ELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDRLRHYATTQLSKSGVRLVRGIV 90
EL DF+ +DV Y ++ + VTLIEA++ IL SFD RL Y
Sbjct: 172 ELYDFLRKDVHILYPDLEHMVSVTLIEASDHILGSFDRRLVDY----------------- 214
Query: 91 KDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL--DLPKSPGGRIGIDEWLRVP--S 146
V+ L DGT + +GL VWSTGV + LV++L PK PGGR+ +D LR+
Sbjct: 215 --VEPNVAWLKDGTPLHFGLCVWSTGVKATPLVQALPPSFPKGPGGRLLVDGRLRLQGHD 272
Query: 147 VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG 206
+ VFAVGDC+ + LP LAQVA++Q KYL +LN+ + +
Sbjct: 273 QKGVFAVGDCA----ISETRPLPCLAQVAQQQAKYLGGVLNKYSEPHVNKEVP------- 321
Query: 207 DPFVYRHLGSMATIGRYKALVDLRQNKESKGLS------LAGFLSWLVWRSAYLTRVVSW 260
PF YRHLGSMA +G +K +VD + + KG L G+ ++L+WR+AY T+ VSW
Sbjct: 322 -PFEYRHLGSMAQLGMWKGVVDSAKLDDKKGDEDGKKSVLTGWTAFLLWRAAYWTKSVSW 380
Query: 261 RNRFYVAVNWATTFVFGRDISRI 283
N+ + + W +++FGRDISR
Sbjct: 381 ANKILIPMYWLKSWIFGRDISRF 403
>gi|390595666|gb|EIN05070.1| FAD/NAD(P)-binding domain-containing protein [Punctularia
strigosozonata HHB-11173 SS5]
Length = 495
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 170/294 (57%), Gaps = 26/294 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
+ G+S+EE+ R+L VVVGGGPTGVE++ EL D + D+ + Y + I +TL + A
Sbjct: 215 MPGLSDEERKRVLSFVVVGGGPTGVEWAAELHDLVSSDIPRYYPSLVPLISITLYDVAPH 274
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120
IL +FD L+ YA + ++ +R+ R V+ V+ + + + +P+GL VWSTG+ +
Sbjct: 275 ILGNFDSSLQAYAEKKFARDNIRIRGRRTVEKVEPGWITIKEEGRIPFGLCVWSTGLAVN 334
Query: 121 TLVKSL-DLPK-SPGGRIGIDEWLRV-------PSVQDVFAVGDCSGYLESTGKTVLPAL 171
LV ++ ++PK G + DE LR ++DV+A+GDC+G G VLPA
Sbjct: 335 PLVAAIKEIPKGQKGATLLTDERLRALDASTDNKPMRDVYAIGDCAGV---AGGPVLPAT 391
Query: 172 AQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQ 231
AQVA+++ +L LNR K+G D PF +++ GS+A IG ++ALVD +
Sbjct: 392 AQVAQQKALHLAKELNRAAKSG--------DAYQPVPFEFKNRGSLAYIGGWQALVD--R 441
Query: 232 NKESKGLS--LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ GL AG ++WL+WRSAY T VS RN+ + W ++ GRDISR
Sbjct: 442 TSAASGLKGGNAGRMAWLIWRSAYFTMSVSVRNKILIPTYWFLNWILGRDISRF 495
>gi|443897182|dbj|GAC74523.1| NADH-dehydrogenase [Pseudozyma antarctica T-34]
Length = 481
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 155/312 (49%), Gaps = 57/312 (18%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSF 66
EE+ L VVVGGGPTG EF+ EL D I +D+ + Y H+ + L++A + ILSSF
Sbjct: 191 EEQVRARLGFVVVGGGPTGAEFAAELHDLIRQDLTKIYPHLARLASIKLLDAGKSILSSF 250
Query: 67 DDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILND---GTE-VPYGLLVWSTGVGPST 121
D L YA + ++ G+ +V + V Q + + + G E + G++VWSTG+ +
Sbjct: 251 DKGLAEYAMQKFARDGIEVVLNARINSVTDQGVWVQNPHGGAELMRAGMVVWSTGITAAP 310
Query: 122 LVKSL----------------------DLPKSPGGRIGIDEWLRVPSVQD--------VF 151
+VK+L P G I + P Q+ V+
Sbjct: 311 IVKALRGVAKEDRSHKWLTDAKLNLLVHQPARDKGEIRGNIHQPAPDKQEGDVVPMTNVW 370
Query: 152 AVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVY 211
A+GDCS + T LPA AQVA ++G YL ++ N S +PF +
Sbjct: 371 AIGDCS-----SQATPLPATAQVANQKGSYLAAVFN----------ASPTHPSAQEPFKF 415
Query: 212 RHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA 271
+ GSMA+IG +AL+D K+ G L+WL+WRSAY +SWRNRF V NWA
Sbjct: 416 KDKGSMASIGSNEALIDSPVGKDK------GALAWLLWRSAYTIMAMSWRNRFLVPANWA 469
Query: 272 TTFVFGRDISRI 283
+ +FGRD+ R
Sbjct: 470 SNLLFGRDVGRF 481
>gi|268318203|ref|YP_003291922.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Rhodothermus marinus DSM 4252]
gi|262335737|gb|ACY49534.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Rhodothermus marinus DSM 4252]
Length = 449
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 150/271 (55%), Gaps = 20/271 (7%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILS 64
E + LL+ VVVGGGPTG+E +G L ++ R+ Y H+ + V L+EA + +L+
Sbjct: 162 PERIREGLLNIVVVGGGPTGIEMAGALVEWFELVFRKDYPHLPMNRARVLLVEALDTVLA 221
Query: 65 SFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
++D+RL+ YA QL + GV L G V V + L G +P ++W+ GV L
Sbjct: 222 TYDERLQQYARRQLRRRGVELHLGDPVARVTPDAVYLQSGERIPTRTVIWAAGVRACPLA 281
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
L LP++ GGRI ++ LRVP +VF +GD + + G+ + P +A VA + +++
Sbjct: 282 DRLGLPQTRGGRIEVEADLRVPGHPNVFVIGDLAASRDENGR-LHPQMAPVAIQGARHVA 340
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
+ R+ + + +PF YRH G+MATIGR+ A+ +L+ GL L G
Sbjct: 341 RQIRRLLQG-----------QETEPFHYRHRGTMATIGRHAAVAELK-----GGLRLTGP 384
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
L+W W + +L +++ +RNR V +NWA +
Sbjct: 385 LAWFAWLALHLVQLIGFRNRLQVLINWAWNY 415
>gi|345304500|ref|YP_004826402.1| NADH dehydrogenase (ubiquinone) [Rhodothermus marinus
SG0.5JP17-172]
gi|345113733|gb|AEN74565.1| NADH dehydrogenase (ubiquinone) [Rhodothermus marinus
SG0.5JP17-172]
Length = 436
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 149/271 (54%), Gaps = 20/271 (7%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILS 64
E + LL+ VVVGGGPTG+E +G L ++ R+ Y H+ + V L+EA + +L+
Sbjct: 150 PERIREGLLNIVVVGGGPTGIEMAGALVEWFELVFRKDYPHLPMNRARVLLVEALDTVLA 209
Query: 65 SFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
S+D+RL+ YA QL + GV L G V V + L G +P ++W+ GV L
Sbjct: 210 SYDERLQQYARRQLRRRGVELHLGDPVARVTPDAVYLQSGERIPTRTVIWAAGVRACPLA 269
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
L LP++ GGRI ++ LRVP +VF +GD + + G+ + P +A VA + +++
Sbjct: 270 DRLGLPQARGGRIEVEADLRVPGHPNVFVIGDLAASRDEQGR-LHPQMAPVAIQGARHVA 328
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
+ R+ + + +PF YRH G MATIGR+ A+ +L+ GL L G
Sbjct: 329 RQIRRLLQG-----------QETEPFRYRHRGMMATIGRHAAVAELK-----GGLRLTGP 372
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
L+W W + +L +++ +RNR V +NWA +
Sbjct: 373 LAWFAWLALHLVQLIGFRNRLQVLINWAWNY 403
>gi|322701645|gb|EFY93394.1| pyridine nucleotide-disulfide oxidoreductase, putative [Metarhizium
acridum CQMa 102]
Length = 488
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 159/309 (51%), Gaps = 50/309 (16%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L S+EE+ +LLH VVGGGPTG+EF+ EL D I D+ + Y ++ + +T+ + A +
Sbjct: 202 LPTTSDEERKKLLHFAVVGGGPTGIEFAAELHDLIKDDLSRMYPKLQRHCAITVYDIAPK 261
Query: 62 ILSSFDDRLRHYATTQLSKSGVR------LVRGIVKDVDSQKLILNDGTEVPYGLLVWST 115
+L FD +L YAT + G+R L R + I + EV G++VWST
Sbjct: 262 VLPMFDSKLAAYATETFKRQGIRVKTEHHLTRIRRQGHHLMLQIKEEPDEVGAGIVVWST 321
Query: 116 GVGPSTLVKSL---------DLPKSP-GGRIGIDEWLRV-----------PSVQDVFAVG 154
G+ + LVK+L + K P G I + L+V +++DV+AVG
Sbjct: 322 GLMQNPLVKTLVESDIEGTGKIAKDPRTGSIVTNPNLQVQLQGPGDGSETTTLKDVYAVG 381
Query: 155 DCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHL 214
DC S PA AQVA +Q YL LN+ D E PF +++
Sbjct: 382 DCI----SVQGASYPATAQVASQQAVYLAKQLNK------------GDKEASRPFKFKNW 425
Query: 215 GSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
G M +G ++A+ +S+ L G+ +W++WR+AYLTR +S RN+ + V W T+
Sbjct: 426 GVMTYLGSWRAI------HQSEADYLRGWAAWVLWRTAYLTRSMSVRNKIMIPVYWVITW 479
Query: 275 VFGRDISRI 283
+FGRDISR
Sbjct: 480 IFGRDISRF 488
>gi|345571042|gb|EGX53857.1| hypothetical protein AOL_s00004g516 [Arthrobotrys oligospora ATCC
24927]
Length = 617
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 152/319 (47%), Gaps = 50/319 (15%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+EEEK RLLH VVVGGGPTG+EF+ EL DF D+R+ + D VTL+EA +L
Sbjct: 305 TEEEKDRLLHMVVVGGGPTGIEFAAELQDFFEEDLRKWVPDIADRFKVTLVEALPNVLPM 364
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGTEVP----YGLLVWSTG 116
F L Y + + + +VK V + + + DG++V YGLLVW+TG
Sbjct: 365 FSKSLIDYTEKTFKDENISVRTKTMVKKVTDKNIEVEATQADGSKVKESINYGLLVWATG 424
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L LP R G ++++L V ++A+GDCS T A
Sbjct: 425 NAVRGVVRDLMTQLPAQKNSRRGLAVNDYLVVDGTDGIWALGDCSA-------TKYAPTA 477
Query: 173 QVAERQGKYLFSLLNRIGKAGGGRAN----------SAKDMELG---------------- 206
QVA +QG +L L N + K SA D E
Sbjct: 478 QVAAQQGNFLARLFNSMAKTQAVEEELRSLDARLQASADDAEKALLNAEINAKGRSLSKV 537
Query: 207 ---DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG +A+ DL + + G L++L WRSAY++ V S RNR
Sbjct: 538 KQLSPFQYSHQGSLAYIGADRAVADLNWFGGAISSATGGELTYLFWRSAYVSMVFSLRNR 597
Query: 264 FYVAVNWATTFVFGRDISR 282
V +W T FGRD+SR
Sbjct: 598 ILVLTDWLKTKAFGRDVSR 616
>gi|354544989|emb|CCE41714.1| hypothetical protein CPAR2_802640 [Candida parapsilosis]
Length = 577
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 158/301 (52%), Gaps = 33/301 (10%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS 65
+++E+ RLL+ +V GGGPTGVE +GE+ D+I +D+++ V + VTLIE+ ++L +
Sbjct: 284 NDKERKRLLNVIVCGGGPTGVEAAGEIQDYIDQDLKKWMPEVAKDLKVTLIESQPKVLHT 343
Query: 66 FDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLIL-----NDGTEVPYGLLVWSTGVG- 118
F+ +L Y + + LV + VD + + D VPYG+L+W+TG
Sbjct: 344 FNPKLVEYTNQVFQDTNINLVTNARINSVDDKYCTVFHKQTKDTEIVPYGMLIWATGNAT 403
Query: 119 ---PSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
L+ +D K+ ID++L++ ++FA+GDC+ T P AQVA
Sbjct: 404 RDFTHVLMDKIDAQKNAKRGFLIDKYLKLQGSSNIFALGDCTF-------TKYPPTAQVA 456
Query: 176 ERQGKYLFSLLNRI-------------GKAGGGRANSAKDMELGDP-FVYRHLGSMATIG 221
+QG+YL N++ K+ + A +E P FVY + GS+A IG
Sbjct: 457 HQQGEYLADYFNKLQKLSSLKYKIDHESKSSQTLISRADRLEKNLPHFVYNYQGSLAYIG 516
Query: 222 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
KA+ DL S +S G L++L WRSAY+ +S +N+ + ++W + FGRD S
Sbjct: 517 SEKAVADLAWGSWS-NVSTGGNLTYLFWRSAYIYMCLSVKNQILICIDWLKVYAFGRDCS 575
Query: 282 R 282
R
Sbjct: 576 R 576
>gi|403215969|emb|CCK70467.1| hypothetical protein KNAG_0E02050 [Kazachstania naganishii CBS
8797]
Length = 565
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 161/313 (51%), Gaps = 55/313 (17%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E++RLL V+VGGGPTGVEF+ EL D++ +D+ + + I VTL+E ILS F
Sbjct: 268 DPERARLLSFVIVGGGPTGVEFAAELKDYVDQDLAKWMPELSKEIKVTLVEGMPHILSMF 327
Query: 67 DDRLRHYATTQLSKSGVRL-----VRGIV------KDVDSQKLILNDGTEVPYGLLVWST 115
D L YA K + L V+ + K+ DS K+ E+ YG+LVW+T
Sbjct: 328 DKNLIDYAEKLFKKEQINLKLKTHVQAVTPTKVLGKNADSNKI-----EEISYGVLVWAT 382
Query: 116 GVGPSTLVKSL--DLPKSPGGR-IGIDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPAL 171
G P +VK L LP+ R + I++ L++ + VFA+GDC T P L
Sbjct: 383 GNAPRDVVKDLMNKLPEQNSRRGLLINDKLQLLGAESSVFAIGDC---------TFFPGL 433
Query: 172 ---AQVAERQGKYLFSLLNRIGK--------------------AGGGRANSAKDMELGDP 208
AQVA ++GKYL ++ N++ K + N K +L P
Sbjct: 434 FPTAQVAHQEGKYLSTVFNKLHKIDQLEWRVQQQKTQNASTEIINKLQGNIKKLNDLIVP 493
Query: 209 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 268
F Y H+GS+A +G+ KA+ D+ ++ AG ++L W+SAYL S+RNR VA+
Sbjct: 494 FKYHHMGSLAYVGKDKAIADIPIG--GSNITSAGSFTFLFWKSAYLAMFESFRNRLLVAL 551
Query: 269 NWATTFVFGRDIS 281
+W F+ GRD S
Sbjct: 552 DWTKVFITGRDSS 564
>gi|400599281|gb|EJP66985.1| pyridine nucleotide-disulfide oxidoreductase, putative [Beauveria
bassiana ARSEF 2860]
Length = 498
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 156/310 (50%), Gaps = 51/310 (16%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L ++ E+ LL+ +VGGGPTG+EF+ EL D + D+ + Y + ++ VT+ + A +
Sbjct: 211 LPSTTDAERGELLNFAIVGGGPTGIEFAAELHDLVHEDLAKLYPSLMKFVQVTVYDIAPK 270
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-----VRGIVKDVDSQKL-ILNDGTEVPYGLLVWST 115
+L FD L YA + G+++ ++ I + D KL I EV GLLVWST
Sbjct: 271 VLPMFDQALASYAMDLFHRQGIQVKTEHSLQSIRRQGDILKLRIKGHDAEVGAGLLVWST 330
Query: 116 GVGPSTLVKSLDLPKSPG----------GRIGIDEWLRV------------PSVQDVFAV 153
G+ + LV L PG G I D +RV + DVFA+
Sbjct: 331 GLMQNPLVAKLLEQDIPGLGRIVKDARTGGIMTDGHMRVLTGLEAGGDGPRKPLPDVFAI 390
Query: 154 GDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRH 213
GDC+ E LPA AQVA +Q +L +N+ DM+ D F +R+
Sbjct: 391 GDCTVQEEHR----LPATAQVASQQAAWLGKRINK------------GDMDTADEFKFRN 434
Query: 214 LGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATT 273
G+MA +G +A+ + L G+ +W++WR+AYLT+ +SWRN+F + W T
Sbjct: 435 WGAMAYLGSKRAI------HQHGADGLKGWPAWILWRTAYLTKSMSWRNKFKIPFQWLIT 488
Query: 274 FVFGRDISRI 283
+FGRDISR
Sbjct: 489 ALFGRDISRF 498
>gi|440800833|gb|ELR21867.1| NADH dehydrogenase, extrinsic, putative [Acanthamoeba castellanii
str. Neff]
Length = 480
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 151/291 (51%), Gaps = 44/291 (15%)
Query: 22 GGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDRLRHYATTQLSK 80
GGPTGVE + EL DF+ +V + + ++ ++ +TL+E + ILS++D ++ Y T+
Sbjct: 203 GGPTGVEAAAELRDFVQSNVHKWFPKLEPHVSITLVELMDHILSTYDAKISTYTTSHFKN 262
Query: 81 SGV------RLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL--DLPKSP 132
+ + R+V DV Q+ + +PYGL +WSTG+G S L+ + LP+
Sbjct: 263 TNIDIRTKSRVVAVKPGDVIIQRTDTKETQHIPYGLCIWSTGIGTSPLINKIREKLPQDI 322
Query: 133 GGR---IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE------------- 176
+ D++LRV ++A+GDC+ + L L + A+
Sbjct: 323 QTNRRALLTDQFLRVKGADGIYALGDCATIAQEAMLGKLNDLFKEADLNKDNHLQIEEFR 382
Query: 177 -----RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQ 231
++G+YL LLNR+ K +EL F Y+HLGS IG A+ +
Sbjct: 383 SLIDNQEGQYLGKLLNRVAN---------KSVELDTGFHYKHLGSFCFIGSEHAVAEF-- 431
Query: 232 NKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
++GL L GF +W +WRS YL++ S RN+ YV VNW T++FGRDI+R
Sbjct: 432 ---AEGLVLEGFGAWWLWRSVYLSKQYSLRNKLYVGVNWLKTWIFGRDITR 479
>gi|350631532|gb|EHA19903.1| hypothetical protein ASPNIDRAFT_178085 [Aspergillus niger ATCC
1015]
Length = 494
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 153/292 (52%), Gaps = 32/292 (10%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
++ E R LH VVVGGGPTG+E + E+ DF DV++ + + D + VTL+EA +L
Sbjct: 216 NDTELERKLHMVVVGGGPTGIETAAEMRDFFRNDVQRLFPKLSDKVKVTLVEALPSVLQM 275
Query: 66 FDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTE---------VPYGLLVWSTG 116
F L Y ++ + +++ ++ I + T+ VPYG+LVW+ G
Sbjct: 276 FPKGLIEYTESKFLAEQIDILKNTKVKRATETHIEAEVTQPDGSIKTEMVPYGVLVWAAG 335
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L LP+ R G +DE+LRV Q V+A+GDC+ T A
Sbjct: 336 NAVRPVVRDLMDQLPEQASSRRGLLVDEYLRVKGTQGVWALGDCTA-------TRYSATG 388
Query: 173 QVAERQGKYLFSLLNRIGKAGGGRANSAKDM---ELGDPFVYRHLGSMATIGRYKALVDL 229
QVA ++G YL LN AN+ +DM +L PF Y H GS+A +G A+ DL
Sbjct: 389 QVAHQEGAYLAQFLN------NADANAGEDMARSQLPPPFEYTHQGSLAYVGDGCAIADL 442
Query: 230 RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
+ K + AG L+ ++WR AY+ +S RN++++A +W +FGR +S
Sbjct: 443 --SVFGKNMPFAGALTHILWRIAYIKMCISSRNQYFIAGDWLGPAIFGRSMS 492
>gi|326491059|dbj|BAK05629.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 165/311 (53%), Gaps = 43/311 (13%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
AG +EEE RL+H VVVGGGPTGVE++GEL DF++ D+R+ Y + D + +TLIEA
Sbjct: 267 FAGQTEEEIERLMHMVVVGGGPTGVEYAGELHDFLIDDLRKWYPEIADKLRITLIEALPN 326
Query: 62 ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT----EVPYGLLVWSTG 116
+L +F +L Y + ++ + L R +VKDV + +++ D E+PYGLLVW+TG
Sbjct: 327 VLPAFSKQLIQYTESTFKENKIDVLTRTMVKDVREKSVVVQDANKEIKEIPYGLLVWATG 386
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+ ++L LP+ R G +D +R+ ++FA+GDC+ T A
Sbjct: 387 NTSREITRNLMAKLPEHQTQRRGLVVDGHMRLAGAPEIFALGDCTA-------TSYAPTA 439
Query: 173 QVAERQGKYLFSLLNRIGKAGG---------------------GRANSAKDMELGDPFVY 211
Q A +QG YL ++ +A R N A D+ PF Y
Sbjct: 440 QAASQQGTYLARTFAKMAQAEKLKEQLAEMREKAPGDDVERTVKRLNKALDLP---PFHY 496
Query: 212 RHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA 271
H GS+A IG KA+ DL + + G ++L WRSAY++ + S RNR V ++W
Sbjct: 497 SHQGSLAYIGSEKAIADLPFF--NGNFASGGVATYLFWRSAYVSTLYSARNRTLVILDWM 554
Query: 272 TTFVFGRDISR 282
+FGRD+SR
Sbjct: 555 KVKIFGRDVSR 565
>gi|426193091|gb|EKV43025.1| NDE2 mitochondrial external NADH dehydrogenase [Agaricus bisporus
var. bisporus H97]
Length = 581
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 161/319 (50%), Gaps = 48/319 (15%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
G +E RLLH +VVGGGPTGVE SGEL DF+ D++ Y + + +TL+EA
Sbjct: 262 FPGQDPQEIERLLHMIVVGGGPTGVELSGELHDFLEDDLKSWYPELAGKVRITLVEALPS 321
Query: 62 ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGTEVPYGLLVWSTG 116
+L +F +L Y + +S + L + +VK++ + +IL EVP GL+VW+ G
Sbjct: 322 VLPTFSKQLIDYTQSTFKESKIEVLTKTMVKEIKERSVILQMPDKSIQEVPCGLVVWAGG 381
Query: 117 VGPSTLVKSL--DLPKSPGGRIGI--DEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPAL 171
+ + L P+ R GI D++LR+ +D +FA+GDC+ T
Sbjct: 382 NKGRKVTQDLMAKFPEVQTNRRGIVVDDFLRMTGAEDSIFAIGDCTS-------TAYAPT 434
Query: 172 AQVAERQGKYLFSLLNRIGK-------------------AGGGRANSAKDMELGD----- 207
AQVA +QG YL L+++ K + + +D+E+
Sbjct: 435 AQVASQQGSYLARHLHQMAKHDELQTKLSRLEALAATVVGEEEKKATLRDVEMTKKQLAK 494
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG KA+ DL + ++ G +++ WRSAYL+ + S RNR
Sbjct: 495 IKYRPFDYSHQGSLAYIGSEKAVADL--PFMNGNVATGGVATYMFWRSAYLSTLFSLRNR 552
Query: 264 FYVAVNWATTFVFGRDISR 282
VA +W +FGRD++R
Sbjct: 553 TLVATDWIKVKLFGRDVAR 571
>gi|353240387|emb|CCA72259.1| probable NDE1-mitochondrial cytosolically directed NADH
dehydrogenase [Piriformospora indica DSM 11827]
Length = 564
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 162/310 (52%), Gaps = 39/310 (12%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
G ++ E RLLH +VVGGGPTGVE +GE+ DF++ D+++ Y + D + +TLIEA
Sbjct: 263 FPGQTDSEVDRLLHMIVVGGGPTGVELAGEMHDFVVEDLKKWYPELADRVRITLIEALPN 322
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGT----EVPYGLLVWSTG 116
+L F +L Y + ++ + L+ R +V+++ + +++ D + E+P+GLLVW+ G
Sbjct: 323 VLPMFSKQLIAYTESTFKQNKIDLLTRTMVQEIKPKSVVVKDPSGNKVEIPFGLLVWAGG 382
Query: 117 VGPSTLVKSL--DLPKSPGGRIGI---DEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 171
+ K L + + + G+ D + S +++ GDC+ T
Sbjct: 383 NTMRPITKDLMAKMGQHQTNKRGLTVDDHMVLAGSNGTIYSFGDCTA-------TSYAPT 435
Query: 172 AQVAERQGKYLFSLLNRIGKAGGGRAN-----------------SAKDMELG--DPFVYR 212
AQVA +QG Y+ L N++ + A S K +++ PF Y
Sbjct: 436 AQVAAQQGAYVGRLFNQLAQQARLEAELEELKRSKAELHEIDSVSKKLLKVSKYKPFHYS 495
Query: 213 HLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWAT 272
H GS+A IG KA+ DL + +S G ++L WRSAYL+ + S RNR V ++W
Sbjct: 496 HQGSLAYIGSDKAIADL--PFLNGNISSGGVATFLFWRSAYLSNLFSLRNRSLVMLDWVK 553
Query: 273 TFVFGRDISR 282
F+FGRD+SR
Sbjct: 554 VFIFGRDVSR 563
>gi|393244441|gb|EJD51953.1| FAD/NAD(P)-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 476
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 160/296 (54%), Gaps = 31/296 (10%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L S E+ RLL+ +VGGGPTG EF+ EL D + R++ + V + +T+ + A +
Sbjct: 197 LPNTSVAEQRRLLNFCIVGGGPTGCEFAAELHDLLARELNAAFPSVAKHARITVYDVAPQ 256
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120
IL SFD L YA + ++ G+ + G ++ V L + + EVPYG+LVWSTG+ P+
Sbjct: 257 ILGSFDAGLVDYAVKRFAREGIEIRGGRHIERVGPTSLFIKEEGEVPYGMLVWSTGLAPN 316
Query: 121 TLVKSLDL------PKSPGGRIGIDEWLRV--PS---VQDVFAVGDCSGYLESTGKTVLP 169
L S+ PK+ G I +D L V P + +V+A+GD + + +G+ LP
Sbjct: 317 PLTASISAETLLKDPKTHG--IVVDNALNVIEPDGKLLSNVYAIGDTA--VIQSGR--LP 370
Query: 170 ALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL 229
A AQVA +Q Y+ LN K G A F + + G +A +G ++A+ D
Sbjct: 371 ATAQVASQQAGYVAKKLNAEVKGKTGPAA----------FRFVNRGMLAYLGDWRAIYDR 420
Query: 230 RQNKESKGL--SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+SKGL +G +WL+WRSAY T +S RN+ + V W ++ GRDIS+I
Sbjct: 421 GYGGQSKGLFRKESGRFAWLLWRSAYFTMTLSTRNKILIPVYWFLNWITGRDISKI 476
>gi|448509261|ref|XP_003866100.1| Ymx6 NADH dehydrogenase [Candida orthopsilosis Co 90-125]
gi|380350438|emb|CCG20660.1| Ymx6 NADH dehydrogenase [Candida orthopsilosis Co 90-125]
Length = 571
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 159/301 (52%), Gaps = 33/301 (10%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS 65
+++E+ RLLH +V GGGPTGVE +GE+ D+I +D+++ V + VTLIE+ ++L +
Sbjct: 278 NDKERKRLLHVIVCGGGPTGVEAAGEIQDYIDQDLKKWMPEVAKDLKVTLIESQPKVLHT 337
Query: 66 FDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLIL-----NDGTEVPYGLLVWSTGVG- 118
F+ +L Y + + LV + VD + + D VPYG+L+W+TG
Sbjct: 338 FNPKLVEYTNQVFQDTNINLVTSARINSVDDKYCTVFHKQSKDTEIVPYGMLIWATGNAT 397
Query: 119 ---PSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
L+ ++ K+ +D++L++ ++FA+GDC+ T P AQVA
Sbjct: 398 RDFTHVLMDKVEEQKNAKRGFLVDKYLKLQGSSNIFALGDCTF-------TKYPPTAQVA 450
Query: 176 ERQGKYLFSLLNRIGKAGGGR-------------ANSAKDMELGDP-FVYRHLGSMATIG 221
+QG+YL + +++ K R + A +E P F+Y + GS+A IG
Sbjct: 451 HQQGEYLANYFDKLQKLSSLRYKIDHEQNPSETLKSRAVRLEKNLPHFIYNYQGSLAYIG 510
Query: 222 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
KA+ DL S +S G L++L WRSAY+ +S +N+ + ++W + FGRD S
Sbjct: 511 SEKAVADLAWGSWS-NVSTGGNLTYLFWRSAYIYMCLSVKNQILICIDWLKVYAFGRDCS 569
Query: 282 R 282
R
Sbjct: 570 R 570
>gi|302916961|ref|XP_003052291.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733230|gb|EEU46578.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 484
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 165/312 (52%), Gaps = 51/312 (16%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L S+ ++ RLLH VVGGGPTG+EF+ EL D I D+ + Y + +++ +T+ + A +
Sbjct: 193 LPSASDVQRKRLLHFAVVGGGPTGIEFAAELHDLIHEDLAKMYPELMEHVAITIYDIAPK 252
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-----VRGIVKDVDSQKL-ILNDGTEVPYGLLVWST 115
+L FD L YAT S+ G+R+ ++ I +D D + I + EV G++VWST
Sbjct: 253 VLPMFDRNLAAYATNMFSRRGIRVKTEHHLQRIREDGDVLLMKIKEEPEEVAAGVVVWST 312
Query: 116 GVGPSTLVKSL---------DLPK-SPGGRIGIDEWLRV-------------PSVQDVFA 152
G+ + LV L + K S G I +DE LRV S+ DVFA
Sbjct: 313 GLMQNPLVGRLVGQEVKGAGTIAKDSKTGGIKVDEHLRVQVESQDNNGNTITKSLPDVFA 372
Query: 153 VGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYR 212
+GDC+ G++ PA AQVA +Q YL N G + G + PF +R
Sbjct: 373 IGDCAVV---QGRS-FPATAQVASQQATYLGKRFN-AGTSSQGAPTA--------PFHFR 419
Query: 213 HLGSMATIGRYKALVDLRQNKESKGL-SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA 271
+ G+MA +G ++A+ KG L G +W++WR+AYLT+ +S +N+ + W
Sbjct: 420 NWGTMAYLGGWRAI-------HQKGADELKGRAAWILWRTAYLTKSMSLKNKIMIPFYWL 472
Query: 272 TTFVFGRDISRI 283
T++FGRDISR
Sbjct: 473 ITWIFGRDISRF 484
>gi|344301254|gb|EGW31566.1| hypothetical protein SPAPADRAFT_140814 [Spathaspora passalidarum
NRRL Y-27907]
Length = 554
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 165/302 (54%), Gaps = 37/302 (12%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 68
++SRLLH VV GGGPTGVE +GE+ D+I +D+++ V D + VTL+EA +L+SF
Sbjct: 260 DRSRLLHVVVCGGGPTGVEAAGEIQDYIDQDLKKWVPEVADELKVTLVEALPNVLNSFSK 319
Query: 69 RLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILN----DGT----EVPYGLLVWSTGVGP 119
L Y ++ + L+ ++K V + L DG+ E+PYG+L+W+TG P
Sbjct: 320 PLVEYTKQVFKETNINLLTNTMIKKVSEKSLTATEKKADGSSETYEIPYGMLIWATGNAP 379
Query: 120 ----STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
L+ +D K+ + +DE +++ +VFA+GDC+ T P AQVA
Sbjct: 380 RDFTRDLISKVDEQKNARRGLLVDERMKLDGTDNVFALGDCTF-------TKYPPTAQVA 432
Query: 176 ERQGKYL---FSLLNRIGKAGGGRANSAKD-----------MELGDP-FVYRHLGSMATI 220
++G++L F+ L+++ ++ + +E P F+Y + GS+A I
Sbjct: 433 FQEGQFLADYFAKLHQVESLKHSVTTASPEQTDKLTKKLARLENKLPHFIYNYQGSLAYI 492
Query: 221 GRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
G KA+ DL S +S G L++L WRSAY+ +S +N+ V+V+W ++FGRD
Sbjct: 493 GSEKAVADLVWGDWS-NISSGGGLTFLFWRSAYIYMCLSVKNQVLVSVDWLKVYLFGRDF 551
Query: 281 SR 282
S+
Sbjct: 552 SK 553
>gi|397643426|gb|EJK75857.1| hypothetical protein THAOC_02409 [Thalassiosira oceanica]
Length = 604
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 172/336 (51%), Gaps = 61/336 (18%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L +++E+K + L V+VG GPTG+EF+ EL DFI D R+ Y + ++ + ++E A
Sbjct: 271 LPNLTDEDKQKELTFVIVGAGPTGIEFAAELLDFIEEDGRRYYKDLLPFVRIKIVEAAPS 330
Query: 62 ILSSFDDRLRHYATTQLSK----SGVR-------LVRGIVKDVDSQKLILNDGTEVPYGL 110
IL F+D ++ A +L++ GV+ L+ +V +V + + DG ++PYG+
Sbjct: 331 ILRPFEDGMKDEAIRKLTRKIEIEGVQTLQPLEILLNKLVSEVSANYVYFKDGEKIPYGM 390
Query: 111 LVWSTGVGP----STLVKSLDLPKSPG------GRIGIDEWLRVPSVQ-DVFAVGDCSGY 159
+W+ G+GP +++V+SLD + GR+G+D WLRV + VFA+GDCS
Sbjct: 391 ALWAAGIGPLPITTSMVESLDDTEQKEAQDFARGRLGVDPWLRVIGGEGKVFALGDCSCV 450
Query: 160 LESTGKTVLPALAQVAERQGKYLFSLLNR----IGKAGG----------GRANSAK---- 201
+ +LPA AQVA +QG++L LL++ K GG G++ S
Sbjct: 451 ---SSTPMLPATAQVASQQGEFLGKLLSKDYCVDAKTGGVIIPPMMLDEGQSRSLSERIA 507
Query: 202 -----DMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG-----------LSLAGFLS 245
+ + PF Y LG +A G AL L Q KG L + G L
Sbjct: 508 SFATGEKNIAAPFQYLDLGILAYTGSGSALAQL-QVAPGKGDPSSETWNPVRLQIKGALG 566
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
+ +WRS YL + S +N V ++W +FGRDIS
Sbjct: 567 FGLWRSIYLWKQTSPKNVVLVTLDWLKVKLFGRDIS 602
>gi|346318211|gb|EGX87815.1| alternative NADH-dehydrogenase [Cordyceps militaris CM01]
Length = 581
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/323 (36%), Positives = 170/323 (52%), Gaps = 54/323 (16%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L G SEEE +RL+H VVVGGGPTGVEF+GEL DF D+++ + VTLIEA
Sbjct: 269 LRGQSEEEMNRLMHMVVVGGGPTGVEFAGELQDFFEEDIKKLVPGISPRFKVTLIEALPN 328
Query: 62 ILSSFDDRLRHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGT----EVPYGLLV 112
+L SF +L Y L + + +V+ + ++ ++ DGT ++PYGLLV
Sbjct: 329 VLPSFSKQLIDYTENTLREEKIDIMTKTMVKNVTENTVEAEISKPDGTKERVQIPYGLLV 388
Query: 113 WSTGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKT 166
W+TG +VK + +P R G ++E+L V +DV+AVGDC +GY +
Sbjct: 389 WATGNAVRPIVKDMMSRIPAQKDSRRGLAVNEYLVVQGARDVWAVGDCAVAGYAPT---- 444
Query: 167 VLPALAQVAERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD-- 207
AQVA ++G +L L N + K G A+ A+++EL +
Sbjct: 445 -----AQVASQEGSFLARLFNNMAKTESLEGRIHDLSSKMNLKAGNAADDAREIELLEKQ 499
Query: 208 --------PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVS 259
PF Y H GS+A IG KA+ D+ + + L+ G L++L WRSAYL+ S
Sbjct: 500 LRRIKDVKPFRYSHQGSLAYIGSEKAVADV--SWWNGNLATGGSLTYLFWRSAYLSMCFS 557
Query: 260 WRNRFYVAVNWATTFVFGRDISR 282
RNR V ++W + FGRDISR
Sbjct: 558 TRNRVLVILDWLKSKAFGRDISR 580
>gi|403418911|emb|CCM05611.1| predicted protein [Fibroporia radiculosa]
Length = 473
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 154/275 (56%), Gaps = 24/275 (8%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
I+++++ +LLH +VGGGPTGVEF+ EL D + +V++ Y + ++L + A IL
Sbjct: 213 ITDDDRRKLLHFCIVGGGPTGVEFAAELHDLLHTEVKRHYPSLARLARISLYDVAPHILG 272
Query: 65 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
SFD L+ +AT + ++ G+R L + V+ V++ K+ + + EV +GLLVWSTG+ P+ L+
Sbjct: 273 SFDVGLQEWATKKFTREGIRILTQHHVERVEAGKMYVKEQGEVYFGLLVWSTGLAPNPLI 332
Query: 124 KSLDLPK--SPGGRIGIDEWLRV------PSVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
+S+ + + + DE L V DV+AVGD + ++ LPA AQVA
Sbjct: 333 QSITEAEKDTRTASLITDEHLNVVMKDTGKPDPDVWAVGDAAIIKDNP----LPATAQVA 388
Query: 176 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 235
++ +YL LN I A+D PF + + GS+A +G ++A+ D +
Sbjct: 389 NQKARYLRKKLNLI----------ARDKPAIVPFHFHNAGSLAYLGDWQAVYDRTHAESG 438
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
G L+WL+WRSAY T +S +N+ V V W
Sbjct: 439 PKTKETGRLAWLLWRSAYFTMTLSVKNKILVPVYW 473
>gi|429856559|gb|ELA31464.1| pyridine nucleotide-disulfide [Colletotrichum gloeosporioides Nara
gc5]
Length = 472
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 162/312 (51%), Gaps = 56/312 (17%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSS 65
++ ++ LLH VVGGGPTG+EF+ EL D I D+ + Y H+ + + +T+ + A ++L
Sbjct: 182 TDAQRRDLLHFAVVGGGPTGIEFAAELHDLIHDDLSKIYPHLMELVSITIYDIAPKVLPM 241
Query: 66 FDDRLRHYATTQLSKSGV------RLVRGIVKDVDSQKLILND--GTEVPYGLLVWSTGV 117
FD +L YAT Q + G+ L R D +L + + EV G+ VWSTG+
Sbjct: 242 FDQQLATYATEQFRRQGISVKTEHHLQRVRPDDNGGLRLKIKEYGDEEVGAGICVWSTGL 301
Query: 118 GPSTLVKSLDLP--KSP---------------GGRIGIDEWLRV----PS-----VQDVF 151
+ L+++L +SP G I D LRV P + DV+
Sbjct: 302 MQNPLIQTLVAKELRSPTEKEGETVTIKKAERSGGIITDPMLRVRLNDPENENALLPDVY 361
Query: 152 AVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVY 211
A+GDCS LE+ LPA AQVA +Q KYL LN RA S K+ PF +
Sbjct: 362 AMGDCS-ILEN---QTLPATAQVASQQAKYLAKTLN--------RATSGKEPA---PFSF 406
Query: 212 RHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA 271
R+ G+M +G ++A+ +S L G +W++WR+AYLT+ +S +N+ V W
Sbjct: 407 RNWGAMTYLGSWRAI------HQSSADELKGRAAWILWRTAYLTKSMSIKNKVLVPWYWF 460
Query: 272 TTFVFGRDISRI 283
T+VFGRDISR
Sbjct: 461 ITWVFGRDISRF 472
>gi|398395235|ref|XP_003851076.1| hypothetical protein MYCGRDRAFT_74173 [Zymoseptoria tritici IPO323]
gi|339470955|gb|EGP86052.1| hypothetical protein MYCGRDRAFT_74173 [Zymoseptoria tritici IPO323]
Length = 491
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 157/311 (50%), Gaps = 57/311 (18%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L S E + ++L+ VVVGGGPTG+E+S EL D I D+ + Y + ++ +T+ + A +
Sbjct: 208 LPTTSVELRDQILNFVVVGGGPTGIEWSAELHDLIHEDMSRLYPELVKHVKITVYDVAPK 267
Query: 62 ILSSFDDRLRHYATTQLSKSGV---------RLVRGIVKDVDSQK------LILNDGTEV 106
+L FD++L YA ++G+ L G V + DS L L + EV
Sbjct: 268 VLGMFDEKLSKYAMKTFQRNGISIKTNHHVEELRPGTVANPDSTDAFTCYTLKLKEEGEV 327
Query: 107 PYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDE-----------WLRVPS---VQDVFA 152
G+ VWSTG+ + V+S + RI DE ++ P + DV+A
Sbjct: 328 GVGMCVWSTGLMMNPFVES-----ALKDRIKQDERSHAVLTNANLQIKGPDDTPIPDVYA 382
Query: 153 VGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYR 212
+GDC+ LE T PA AQVA ++ +L N+ D E F Y+
Sbjct: 383 IGDCA-VLEGTA---YPATAQVASQKAGWLAKRFNK------------GDFERQKGFQYK 426
Query: 213 HLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWAT 272
LG MA IG A++ ++ G ++GFL+W +WR YLT+ +SWRNR + + W+
Sbjct: 427 DLGVMAYIGNRNAIL------QTGGGKISGFLAWCIWRGVYLTKSMSWRNRILIPIYWSI 480
Query: 273 TFVFGRDISRI 283
FVFGRDISR
Sbjct: 481 NFVFGRDISRF 491
>gi|310793149|gb|EFQ28610.1| hypothetical protein GLRG_03754 [Glomerella graminicola M1.001]
Length = 516
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 164/319 (51%), Gaps = 63/319 (19%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSS 65
++E++ ++LH VVGGGPTG+EF+ EL D I D+ + Y H+ +++ +T+ + A ++L
Sbjct: 219 TDEQRRKMLHFAVVGGGPTGIEFAAELHDLIHDDLSKLYPHLMEFVSITIYDIAPKVLPM 278
Query: 66 FDDRLRHYATTQLSKSGVRL-----VRGIVKDVDSQ----KLILND--GTEVPYGLLVWS 114
F+ +L YA + G+++ ++ I D D KL + + EV GL+VWS
Sbjct: 279 FEQQLASYAEDLFRRQGIKVKTQHHLQRIRSDEDDTYNTLKLKIKEYGDEEVGAGLVVWS 338
Query: 115 TGVGPSTLV-----KSLDLPKSP----------------GGRIGIDEWLRV----PS--- 146
TG+ + L+ K L P S G I D LRV P
Sbjct: 339 TGLMQNPLIQKILKKELRNPASAVEGKRSEIVKVLKAERSGGIITDSHLRVRLDDPDNEK 398
Query: 147 --VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDME 204
+ DV+++GDCS + TG LPA AQVA +Q YL +LNR G +
Sbjct: 399 AVLPDVYSLGDCS--VLETG--TLPATAQVASQQAVYLAKMLNRAADDRGSK-------- 446
Query: 205 LGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRF 264
PF +R+LG+MA +G ++A+ +S L G +W++WR AYLT+ +S RN+
Sbjct: 447 ---PFKFRNLGTMAYLGSWRAI------HQSSADELKGRAAWILWRCAYLTKSMSIRNKI 497
Query: 265 YVAVNWATTFVFGRDISRI 283
V W T+VFGR ISR
Sbjct: 498 LVPFYWFITWVFGRGISRF 516
>gi|342885841|gb|EGU85793.1| hypothetical protein FOXB_03641 [Fusarium oxysporum Fo5176]
Length = 2310
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 165/311 (53%), Gaps = 51/311 (16%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L S ++ RLLH VVGGGPTG+E++ EL D I D+ + Y + ++ +T+ + A +
Sbjct: 2019 LPSTSVAQRKRLLHFAVVGGGPTGIEYAAELHDLIHEDLAKLYPELMPHVAITIYDIAPK 2078
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-----VRGIVKDVDSQKL-ILNDGTEVPYGLLVWST 115
+L FD L YAT+ S++G+++ ++GI +D D + I + EV G++VWST
Sbjct: 2079 VLPMFDRNLAAYATSIFSRAGIKVKTEHHLQGIRRDEDVLLMRIKEEPEEVAAGVVVWST 2138
Query: 116 GVGPSTLVKSL---------DLPKS-PGGRIGIDEWLRV-------------PSVQDVFA 152
G+ + LV L + K+ G +D LRV ++ DV+A
Sbjct: 2139 GLMQNPLVGKLVGREVEGMGKIAKNCKTGGFAVDSHLRVQVEAQDSNGKQITKTLPDVYA 2198
Query: 153 VGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYR 212
+GDC+ G++ LPA AQVA +Q YL N G + G + PF +R
Sbjct: 2199 IGDCANI---QGES-LPATAQVASQQATYLGKRFN-AGTSSQGPPTA--------PFHFR 2245
Query: 213 HLGSMATIGRYKALVDLRQNKESKGL-SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA 271
+ G+MA +G ++A+ KG L G +W++WR+AYLT+ +S +N+ + W
Sbjct: 2246 NWGTMAYLGGWRAI-------HQKGTDELKGRAAWILWRTAYLTKSMSLKNKLMIPFYWL 2298
Query: 272 TTFVFGRDISR 282
T++FGRDISR
Sbjct: 2299 VTWIFGRDISR 2309
>gi|452980483|gb|EME80244.1| hypothetical protein MYCFIDRAFT_189859 [Pseudocercospora fijiensis
CIRAD86]
Length = 472
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 161/312 (51%), Gaps = 56/312 (17%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L S E K LL+ VVGGGPTG+E+S EL D + D+++ Y + Y+ +T+ + A
Sbjct: 186 LPTTSVETKKMLLNFAVVGGGPTGIEWSAELYDMVYEDIKRLYPELVQYVKITVYDVAPT 245
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-----VRGIVKDVDSQK--------------LILND 102
+L FD RL YA + G+ + ++ + DV K L + +
Sbjct: 246 VLGMFDKRLSDYAMKTFGRQGIDIKTSHHIQELRLDVPEGKQPPPGVRDGGSLYTLKIEE 305
Query: 103 GTEVPYGLLVWSTGVGPSTLVKSL------DLPKSPGGRIGIDEWLRVPS-----VQDVF 151
E+ G++VWSTG+ + V+S KS G I +E L+V + DV+
Sbjct: 306 EGEIGCGMVVWSTGLMMNPFVESALKGKVKQHEKSHG--ILTNERLQVKDATDKPIPDVY 363
Query: 152 AVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVY 211
A+GDC+ LE T PA AQVA ++ +L LN+ D+E + F Y
Sbjct: 364 ALGDCA-ILEGTS---YPATAQVASQKAYWLAKRLNK------------GDIE-QNKFNY 406
Query: 212 RHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA 271
R+LG MA IG KA++ +S G ++G ++W++WR AYLT+ VSWRNR + + W
Sbjct: 407 RNLGVMAYIGNRKAIL------QSGGGDISGRIAWMIWRGAYLTKTVSWRNRILIPIYWT 460
Query: 272 TTFVFGRDISRI 283
++FGRDISR
Sbjct: 461 INWIFGRDISRF 472
>gi|397636505|gb|EJK72302.1| hypothetical protein THAOC_06178 [Thalassiosira oceanica]
Length = 385
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 161/313 (51%), Gaps = 46/313 (14%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDD 68
++ RLL +VVGGGPT EF EL DF+ +DV + Y + +I +TL+EA IL SFD
Sbjct: 80 QRDRLLSFIVVGGGPTSCEFMSELHDFVTKDVVKWYPELAPHIKLTLVEAGPGILGSFDK 139
Query: 69 RLRHYATTQLSKS--GVRLVRGIV----KDVDSQKLI---LNDGTEVPYGLLVWSTGVGP 119
L Y +L + V+L + + VD +++ DGTE +G++VWS G+ P
Sbjct: 140 ALSEYYLEKLREMDIDVKLSTAVSAIEERYVDGEQITVAKFGDGTEQNFGVMVWSAGLSP 199
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVAERQ 178
++ +L GR+ +D +LRVP+ + VFA+GDC+ ES LP A VAE+
Sbjct: 200 VNFLEKSNLAME-RGRVAVDNYLRVPNSKGRVFALGDCATTSES-----LPPTATVAEQS 253
Query: 179 GKYLFSLLNRIGKAGG--GRANSAKDMEL-GD-----------------------PFVYR 212
YL N + N KD+ L GD F Y+
Sbjct: 254 ALYLADCFNNYHSKFDVLDKKNDNKDVPLPGDVTPYLMPWNALSFLNKLFCDSSPEFQYK 313
Query: 213 HLGSMATIGRYKALVDLRQNKESKGL--SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+ GSMA++G + DL+++ + GL +++G S+LVW S YLT+ +S +N + + W
Sbjct: 314 NRGSMASMGFGGGVTDLKKS-DLPGLKSTMSGQASYLVWSSTYLTKQLSLQNMILIPMYW 372
Query: 271 ATTFVFGRDISRI 283
+FGRDISR
Sbjct: 373 FKALIFGRDISRF 385
>gi|242215985|ref|XP_002473803.1| predicted protein [Postia placenta Mad-698-R]
gi|220727069|gb|EED81000.1| predicted protein [Postia placenta Mad-698-R]
Length = 463
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 153/291 (52%), Gaps = 30/291 (10%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS 65
I+++++ +LLH +VGGGPTGVEF+ EL D + +++Q Y + ++L + +
Sbjct: 190 ITDDDRRKLLHFCIVGGGPTGVEFAAELHDLLHAEIKQSYPSLARMDKISLYDVAPRILG 249
Query: 66 FDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
R +AT + ++ G+ L + V V+S K+ + + EV +GLLVWSTG+ P+ LV+
Sbjct: 250 IRLHTRSWATKKFTREGINILTQHHVDRVESGKMYVKEQGEVHFGLLVWSTGLAPNPLVQ 309
Query: 125 SL-DLPKSPG-GRIGIDEWLRV------PSVQDVFAVGDCS----GYLESTGKTVLPALA 172
+L + K P I DE L V DV+A+GD + L +T + LP+ A
Sbjct: 310 NLTEAEKDPKTASILTDEHLNVLMKDTGAPNPDVWAIGDAAIIKGNPLPATAQGELPSPA 369
Query: 173 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 232
Q YL LNR+ +D +PF + + GS+A +G ++A+ D
Sbjct: 370 Q-------YLRKKLNRL----------VRDRAAPEPFAFHNAGSLAYLGDWQAVYDRSHA 412
Query: 233 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G ++WL+WRSAY T +S +N+ V W ++FGRD+SR
Sbjct: 413 ESGPKTMETGRVAWLLWRSAYFTMTLSLKNKILVPTYWFMNWIFGRDLSRF 463
>gi|219116586|ref|XP_002179088.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409855|gb|EEC49786.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 441
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 162/304 (53%), Gaps = 42/304 (13%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS 64
+++ E+ RLL +VVGGGPT EF+ EL DFI +DV + Y + ++ +T++EA +L
Sbjct: 152 VTDAERRRLLSFLVVGGGPTSCEFTAELHDFIKKDVTRLYRELLPHVSITIVEAGPALLG 211
Query: 65 SFDDRLRHYATTQLSKS--GVRLVRGIVKDVD---------SQKLILNDGTEVPYGLLVW 113
FD L+ YA K VRL +V D +++ + +DGT+ +G +VW
Sbjct: 212 PFDKALQDYAQGLFKKRDIDVRLGTAVVGVEDFEGPGYRFPAKRALFSDGTKHEFGTMVW 271
Query: 114 STGVGPSTLVKSL--DLPKSP-GGRIGIDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLP 169
S G+ P T + L ++ + P RI +DE+LRV + ++A+GD + + TG+ + P
Sbjct: 272 SAGLAPRTFTEELGDNIARHPRTHRILVDEFLRVKGHEGSIWAIGDAA--INETGEPI-P 328
Query: 170 ALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVD- 228
LAQVA +QG YL G+ + K E PF + LGSMA +G K + D
Sbjct: 329 QLAQVARQQGIYL------------GKVFNGKYREDEKPFQFFSLGSMAFMGESKGIYDG 376
Query: 229 -----LRQ-NKES----KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
LR N +S +L G L+ L+WR AY R S N+ + ++W ++FGR
Sbjct: 377 STAGPLRDPNNKSVHHWTPPALRGILAVLLWRFAYWGRQTSVANKIMIPIHWLKAYIFGR 436
Query: 279 DISR 282
DISR
Sbjct: 437 DISR 440
>gi|46125771|ref|XP_387439.1| hypothetical protein FG07263.1 [Gibberella zeae PH-1]
Length = 476
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 162/311 (52%), Gaps = 49/311 (15%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L + E+ RLLH VVGGGPTG+EF+ EL D I D+ + Y + ++ +T+ + A +
Sbjct: 185 LPSTNTAERKRLLHFAVVGGGPTGIEFAAELHDLIHEDLSKLYPDLMPHVAITIYDIAPK 244
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-----VRGIVKDVDSQKL-ILNDGTEVPYGLLVWST 115
+L FD L YAT + G+R+ ++GI + D + I + EV G++VWST
Sbjct: 245 VLPMFDQNLAAYATNIFKREGIRIKTEHHLQGIRRQGDVLLMRIKEEPEEVAAGVVVWST 304
Query: 116 GVGPSTLV-KSLDLPKSPGGRI---------GIDEWLRV-------------PSVQDVFA 152
G+ + LV K++ G+I +D LRV S+ DV+A
Sbjct: 305 GLMQNPLVGKTVGREVEGLGKIAKNDKTGGFAVDSHLRVQVESRDLNGKEITKSLPDVYA 364
Query: 153 VGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYR 212
+GDC+ + LPA AQVA +Q YL N G + G + PF +R
Sbjct: 365 IGDCA----NIEGQALPATAQVASQQATYLGKRFNS-GISSQGPPTA--------PFHFR 411
Query: 213 HLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWAT 272
+ G+MA +G ++A + QN + L G +W++WR+AYLT+ +S++N+ + W
Sbjct: 412 NWGTMAYLGGWRA---IHQNGADE---LKGRAAWILWRTAYLTKSMSFKNKLMIPYYWLI 465
Query: 273 TFVFGRDISRI 283
T++FGRDISR
Sbjct: 466 TWIFGRDISRF 476
>gi|299746144|ref|XP_001837766.2| ndb1 (nad(p)h dehydrogenase b1) [Coprinopsis cinerea okayama7#130]
gi|298406922|gb|EAU84110.2| ndb1 (nad(p)h dehydrogenase b1) [Coprinopsis cinerea okayama7#130]
Length = 487
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 156/299 (52%), Gaps = 40/299 (13%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIE-ANEIL 63
+S+ E+ LL+ +VGGGPTGVEF+ EL D + D+ + Y + +TL + A IL
Sbjct: 208 MSDIERINLLNFCIVGGGPTGVEFAAELHDLLHTDIARHYPRTLVRLAKITLYDVAPNIL 267
Query: 64 SSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
SFD LR Y LS+ GV L V+ V+ K+I+ + EVP+GLLVWSTG+ P+ L
Sbjct: 268 GSFDQSLRKYTEKTLSREGVNILTSHHVERVEPGKMIVKEKGEVPFGLLVWSTGLAPNPL 327
Query: 123 VKSL-DLPKSPG-GRIGIDEWLRV------PSVQDVFAVGDCSGYLESTGKTVLPALAQ- 173
+K++ + K P + ++ L V P+ DV+ +GD +++ LPA AQ
Sbjct: 328 IKAITSVQKDPKTSSLITNDHLNVIMENGEPN-PDVWTIGDAGTVVDAP----LPATAQG 382
Query: 174 ---------VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYK 224
VA ++ KY+ LN++ AKD E PF + + GS+A K
Sbjct: 383 ISLGAWRSLVASQKAKYMVKKLNKL----------AKDREHNVPFTFHNQGSLAKAIYEK 432
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ KE L G +WL+WRSAY T +SWRN+F + +FGRD++R
Sbjct: 433 PSGPAAETKEG----LQGRSAWLLWRSAYFTMTLSWRNKFLNFTDATPPGIFGRDLTRF 487
>gi|358392118|gb|EHK41522.1| hypothetical protein TRIATDRAFT_295401 [Trichoderma atroviride IMI
206040]
Length = 541
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 158/326 (48%), Gaps = 62/326 (19%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
++E+EK LLH V+VGGGPTG+EF+ EL D I D+++ Y + + +T+ + A ++L
Sbjct: 230 LTEDEKKSLLHFVIVGGGPTGIEFAAELHDLIHEDLKKIYPELMPLVRITVYDVAPKVLP 289
Query: 65 SFDDRLRHYAT-----------TQLSKSGVRLVRGIVKDVD---SQKLILNDGTEVPYGL 110
FD L YA T+ G+R+ G + S K+ EV GL
Sbjct: 290 MFDKALAQYAMEVFARQGIQVRTEHHLEGIRVADGTLGSAHGGLSIKIKEYGDKEVEAGL 349
Query: 111 LVWSTGVGPS-----------TLVKSLDLPKSP------GGRIGIDEWLRV--------- 144
+VWSTG+ + T V+ + PKS G I D +LR
Sbjct: 350 VVWSTGLMQNPFVEQMVNKQFTAVQEAEAPKSHLLKDPRTGGIVTDGYLRARITDSKISE 409
Query: 145 -------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRA 197
P + DVF +GDC+ G LP AQVA +Q +L LNR
Sbjct: 410 SNETAAAPVLPDVFVIGDCAVV---EGNESLPKTAQVASQQAAHLARQLNRSTNDDSIDI 466
Query: 198 NSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRV 257
SA PF +R+ G++ +G +KA+ +S +L G+++W+VWR AYLTR
Sbjct: 467 KSA-----WKPFKFRNWGTLTYLGGWKAI------HQSSADTLRGWVAWIVWRGAYLTRS 515
Query: 258 VSWRNRFYVAVNWATTFVFGRDISRI 283
+S RN+ V V W ++VFGRDISR
Sbjct: 516 MSVRNKLMVPVYWFVSWVFGRDISRF 541
>gi|400599490|gb|EJP67187.1| NADH dehydrogenase [Beauveria bassiana ARSEF 2860]
Length = 584
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/323 (36%), Positives = 167/323 (51%), Gaps = 54/323 (16%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L G SEEE RL+H VVVGGGPTGVEF+GEL DF D+++ + VTLIEA
Sbjct: 272 LRGQSEEEMKRLMHMVVVGGGPTGVEFAGELQDFFEEDIKKLVPGISPRFKVTLIEALPN 331
Query: 62 ILSSFDDRLRHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGT----EVPYGLLV 112
+L SF +L Y L + + +V+ + ++ ++ DGT ++PYGLLV
Sbjct: 332 VLPSFSKQLIDYTENTLREEKIDIMTKTMVKNVTENTVEAEISKPDGTKELVKIPYGLLV 391
Query: 113 WSTGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKT 166
W+TG +VK + +P R G ++E+L V +DV+AVGDC +GY +
Sbjct: 392 WATGNAVRPVVKDMMARIPAQKDSRRGLAVNEYLVVQGARDVWAVGDCAVAGYAPT---- 447
Query: 167 VLPALAQVAERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD-- 207
AQVA ++G +L L N + K G A+ A +EL +
Sbjct: 448 -----AQVASQEGSFLARLFNNMAKTESLEARIHDLSSKMNLKAGNAADDAHQIELLEKQ 502
Query: 208 --------PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVS 259
PF Y H GS+A IG KA+ D+ + + L+ G L++L WRSAYL+ S
Sbjct: 503 LRRIKDVKPFRYSHQGSLAYIGSEKAVADV--SWWNGNLATGGSLTYLFWRSAYLSMCFS 560
Query: 260 WRNRFYVAVNWATTFVFGRDISR 282
RNR V ++W + FGRDISR
Sbjct: 561 TRNRVLVILDWLKSKAFGRDISR 583
>gi|260942151|ref|XP_002615374.1| hypothetical protein CLUG_04257 [Clavispora lusitaniae ATCC 42720]
gi|238850664|gb|EEQ40128.1| hypothetical protein CLUG_04257 [Clavispora lusitaniae ATCC 42720]
Length = 546
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 159/305 (52%), Gaps = 38/305 (12%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ ++ RLL VV GGGPTGVE +GEL D+I +D+ V + VTL+EA +L+ F
Sbjct: 249 DPQRKRLLSIVVCGGGPTGVEVAGELQDYIDQDIHAWMPEVASELKVTLVEALPNVLNMF 308
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGT----EVPYGLLVWSTGV 117
+ +L Y + + L +VK VDS+ + DG+ ++PYG+L+W+TG
Sbjct: 309 NKKLVDYTKQVFQDTNIDLKTNTMVKKVDSESVTAQTKAADGSTEMIQIPYGMLIWATGN 368
Query: 118 GPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
P +V++L + + R G +DE L V +++FA+GDCS T AQ
Sbjct: 369 APRPIVRNLTSKIEEQKNARRGLLVDERLLVDGTENIFALGDCSF-------TKFAPTAQ 421
Query: 174 VAERQGKYLFSLLNRIGKAGGGRANSAKD---------------MELG-DPFVYRHLGSM 217
VA ++G +L L ++ + + A D +E +PF Y H GS+
Sbjct: 422 VAFQEGIFLAKHLEKLEEIDALKYKIAHDKSDEHPERLTKKLAKLESNLEPFKYNHQGSL 481
Query: 218 ATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFG 277
A IG +A+ DL S +S G ++LVWRSAY+ +S +N+ V ++W +FG
Sbjct: 482 AYIGSERAVADLVWGDWS-NVSSGGTFTFLVWRSAYVYMCLSVKNQILVVLDWLKIGMFG 540
Query: 278 RDISR 282
RDIS+
Sbjct: 541 RDISK 545
>gi|384494268|gb|EIE84759.1| hypothetical protein RO3G_09469 [Rhizopus delemar RA 99-880]
Length = 440
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 34/305 (11%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
G S+EE RLLH VVVGGGPTGVE++ EL DF++ D+ Y + + +TL+EA
Sbjct: 144 FPGQSQEEIERLLHMVVVGGGPTGVEYAAELHDFLVDDLTAWYPELAGKVKITLVEAMPN 203
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN--DGT--EVPYGLLVWSTG 116
+L +F +L Y + + + + + +VK+V +++++ DG +PYGLLVW+TG
Sbjct: 204 VLPAFSKQLIDYTESTFKEQHIDIHTKTMVKEVKEKEIVVQRPDGKVDAIPYGLLVWATG 263
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
LVK+L P++ R G +D+WLR+ QD++A+GDC+ T A
Sbjct: 264 NTSRPLVKNLMAQYPEAQNVRRGLVVDDWLRMSGTQDIYALGDCTA-------TKYAPTA 316
Query: 173 QVAERQGKYL---FSLLNRIGKAGGGRANSAKDMELG------------DPFVYRHLGSM 217
QVA +QGKYL F+ L+ N+A + E PF Y H GS+
Sbjct: 317 QVAAQQGKYLARVFAQLHATEHYEAEIENAATEEEKAKKLRKLQKAQDIKPFHYSHQGSL 376
Query: 218 ATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFG 277
IG KA+ DL L+ G ++ WRSAY++ + S RNR+ V +W +G
Sbjct: 377 CYIGSDKAIADLPLG--PGNLASGGVATFAFWRSAYISNIFSARNRWLVITDWTKKTFWG 434
Query: 278 RDISR 282
RDISR
Sbjct: 435 RDISR 439
>gi|322707243|gb|EFY98822.1| pyridine nucleotide-disulfide oxidoreductase, putative [Metarhizium
anisopliae ARSEF 23]
Length = 487
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 162/308 (52%), Gaps = 50/308 (16%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L S+EE+ +LLH VVGGGPTG+EF+ EL D I D+ + Y ++ + +T+ + A +
Sbjct: 201 LPTTSDEERKKLLHFAVVGGGPTGIEFAAELHDLIKDDLSRMYPKLQKHCAITVYDIAPK 260
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLIL-----NDGTEVPYGLLVWST 115
+L FD +L YAT + G+R+ + + Q +L + EV G++VWST
Sbjct: 261 VLPMFDSKLAAYATETFKRQGIRVKTEHHLTRIRRQGHVLMLQIKEEPEEVGAGIVVWST 320
Query: 116 GVGPSTLVKSL---------DLPKSP--GGRI----------GIDEWLRVPSVQDVFAVG 154
G+ + LVK+L + K P GG + G + +++DV+AVG
Sbjct: 321 GLMQNPLVKTLVESDIEGVGKIAKDPRTGGIVTNPNLQVQLQGAGDGSETTTLKDVYAVG 380
Query: 155 DCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHL 214
DC+ S PA AQVA +Q YL LNR D E PF +++
Sbjct: 381 DCT----SVQGASYPATAQVAAQQAVYLAKQLNR------------GDKEASKPFKFKNW 424
Query: 215 GSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
G M +G ++A+ +S+ +L G+ +W++WR+AYLTR +S RN+ + V W T+
Sbjct: 425 GVMTYLGSWRAI------HQSEADNLRGWAAWVLWRTAYLTRSMSVRNKIMIPVYWVITW 478
Query: 275 VFGRDISR 282
+FGRDISR
Sbjct: 479 IFGRDISR 486
>gi|149245526|ref|XP_001527240.1| hypothetical protein LELG_02069 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449634|gb|EDK43890.1| hypothetical protein LELG_02069 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 577
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 164/306 (53%), Gaps = 40/306 (13%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E+ RLL VV GGGPTGVE +GE+ D+I +D+ + V+ + VTLIEA +L+SF
Sbjct: 280 DPERKRLLQVVVCGGGPTGVETAGEIQDYIDQDLAKWIPEVQGELKVTLIEALPNVLNSF 339
Query: 67 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILN----DGT----EVPYGLLVWSTGV 117
+ +L Y + + L+ +VK VD + +I + DG+ EVPYG+L+W+TG
Sbjct: 340 NQKLVDYTKQVFQDTNINLLTNTMVKKVDDKTVICSHKNPDGSTSKLEVPYGVLIWATGN 399
Query: 118 GPSTLVKSL-----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+ + L D + G + IDE+L+V +++A+GDC+ + P A
Sbjct: 400 ATRSFTRDLMSKIEDQKNAKRGLL-IDEFLKVDGSDNIYALGDCTF-------SKYPPTA 451
Query: 173 QVAERQGKYLFSLLNRIGKAGGGR---ANSAKDMELGD-------------PFVYRHLGS 216
QVA +QG+YL L ++I + + + A++ ++ F Y + G+
Sbjct: 452 QVAFQQGEYLAKLFDKIHEVESLKYQIQHPAQNQKVESLTRKLDRVEKNLPKFKYNYQGA 511
Query: 217 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 276
+A IG KA+ DL S S GF ++L WRSAY+ +S +N+ V ++W ++F
Sbjct: 512 LAYIGSEKAVADLVWGNWSNITSGGGF-TFLFWRSAYIYMCLSVKNQVLVCLDWVKVWMF 570
Query: 277 GRDISR 282
GRD S+
Sbjct: 571 GRDCSK 576
>gi|358058093|dbj|GAA96072.1| hypothetical protein E5Q_02733 [Mixia osmundae IAM 14324]
Length = 484
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 152/290 (52%), Gaps = 30/290 (10%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEIL 63
++++++ LLH +VG GPTGVEF+ EL D + ++ + Y + ++L + A+ +L
Sbjct: 214 NVTDDQRRALLHFCIVGAGPTGVEFAAELHDLLTAEIVRYYPSIARLARISLYDTADRVL 273
Query: 64 SSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
+FD L YA ++ + G++L + V V+ L + + VPYG+LVWSTG+ +TL
Sbjct: 274 GTFDQELSEYAMSRFMREGIQLKMNHSVTRVNPNSLEVREEGTVPYGMLVWSTGLAANTL 333
Query: 123 VKSL---DLPKSPGGR-IGIDEWLRV-----PSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
+ +L ++ K P + + L V ++ ++FA+GD + +E PA AQ
Sbjct: 334 IANLTDQEVKKDPRTHSLLTTDGLEVFDPKGKAMDNIFAIGD-AAVVEGQHH---PATAQ 389
Query: 174 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 233
VA ++ KYL LN I AK+ PFVY+ G MA +G +KAL+
Sbjct: 390 VASQKAKYLAKKLNAI----------AKERTFSTPFVYQDRGVMAYVGDWKALISTPGGG 439
Query: 234 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+KG +WL WRS Y + S RN V W ++FGRDISR
Sbjct: 440 SAKGTG-----AWLAWRSVYWSMARSPRNLILVPTYWFVGWLFGRDISRF 484
>gi|408399651|gb|EKJ78749.1| hypothetical protein FPSE_01117 [Fusarium pseudograminearum CS3096]
Length = 455
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 161/311 (51%), Gaps = 49/311 (15%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L + E+ RLLH VVGGGPTG+EF+ EL D I D+ + Y + ++ +T+ + A +
Sbjct: 164 LPSTNTAERKRLLHFAVVGGGPTGIEFAAELHDLIHEDLSKLYPDLMPHVAITIYDIAPK 223
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-----VRGIVKDVDSQKL-ILNDGTEVPYGLLVWST 115
+L FD L YAT + G+ + ++GI + D + I + EV G++VWST
Sbjct: 224 VLPMFDQNLAAYATNIFKREGIHIKTEHHLQGIRRQGDVLLMRIKEEPEEVAAGVVVWST 283
Query: 116 GVGPSTLV-KSLDLPKSPGGRI---------GIDEWLRV-------------PSVQDVFA 152
G+ + LV K++ G+I +D LRV S+ DV+A
Sbjct: 284 GLMQNPLVGKTVGREVEGLGKIAKNDKTGGFAVDSHLRVQVESRDPNGKEITKSLPDVYA 343
Query: 153 VGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYR 212
+GDC+ + LPA AQVA +Q YL N G + G + PF +R
Sbjct: 344 IGDCA----NIEGLALPATAQVASQQATYLGKRFNS-GVSSQGPPTA--------PFHFR 390
Query: 213 HLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWAT 272
+ G+MA +G ++A + QN + L G +W++WR+AYLT+ +S++N+ + W
Sbjct: 391 NWGTMAYLGGWRA---IHQNGADE---LKGRAAWILWRTAYLTKSMSFKNKLMIPYYWLI 444
Query: 273 TFVFGRDISRI 283
T++FGRDISR
Sbjct: 445 TWIFGRDISRF 455
>gi|330929751|ref|XP_003302764.1| hypothetical protein PTT_14700 [Pyrenophora teres f. teres 0-1]
gi|311321695|gb|EFQ89159.1| hypothetical protein PTT_14700 [Pyrenophora teres f. teres 0-1]
Length = 561
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 161/357 (45%), Gaps = 83/357 (23%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L S E K +LL+ VVGGGPTG+EFS EL D I D+R+ Y + Y ++T+ + A +
Sbjct: 212 LPTTSIEMKKQLLNFAVVGGGPTGIEFSAELHDLITEDMRRLYPELIQYHNITVYDVAEK 271
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLV---------------RGIVKDVDSQKLI---LNDG 103
+L FD +L YA + + G+++ R D + L + +
Sbjct: 272 VLPMFDKKLADYALQKFKREGIQIKTSHHVEELRPGAPTGRSQPYDAGEEYLFTLKVKEE 331
Query: 104 TEVPYGLLVWSTGVGPSTLVKS-----------LDLPK--------SPG----------- 133
E+ G+ VWSTG+ + V S L +P SP
Sbjct: 332 GEIGVGMCVWSTGLMQNPFVASALSDVREAPTNLHIPSPTSDSATASPSSVKWIVKKDAK 391
Query: 134 -GRIGIDEWLRVPSVQ--------------------DVFAVGDCSGYLESTGKTVLPALA 172
G I D+ LRV + DVFA+GDC G +EST PA A
Sbjct: 392 SGSIITDDHLRVKLIPENSSPDSNDSKKTSIEAIHPDVFALGDC-GIIESTS---YPATA 447
Query: 173 QVAERQGKYLFSLLNR------IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKAL 226
QVA ++ +L N+ I ++S F YR LG++A IG + AL
Sbjct: 448 QVASQKAFWLAKRFNKADINSDIDPQTSSASSSLNPTTTTKGFTYRDLGTLAYIGNWNAL 507
Query: 227 VDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
Q G L G+++W++WR AY+TR VSWRN+ V V W +VFGRDISR
Sbjct: 508 F---QGGGKWGGRLQGYVAWIIWRGAYITRTVSWRNKVLVPVYWVVNWVFGRDISRF 561
>gi|3080393|emb|CAA18713.1| NADH dehydrogenase like protein [Arabidopsis thaliana]
gi|7268946|emb|CAB81256.1| NADH dehydrogenase like protein [Arabidopsis thaliana]
Length = 478
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 157/297 (52%), Gaps = 31/297 (10%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L G++E+E+ R+LH VVVGGGPTGVEF+ EL DF+ D+ + Y K+ + +TL+E A+
Sbjct: 197 LPGLNEQERKRMLHFVVVGGGPTGVEFASELHDFVNEDLVKLYPKAKNLVQITLLEAADH 256
Query: 62 ILSSFDDRLRHYATTQLSKSG--VRLVRGIVKDVD---SQKLILNDGTEVPYGLLVWSTG 116
IL+ FD R+ +A + ++ G V+L +VK D S K + + +PYG++VWSTG
Sbjct: 257 ILTMFDKRITEFAEEKFTRDGIDVKLGSMVVKVNDKEISAKTKAGEVSTIPYGMIVWSTG 316
Query: 117 VGPSTLVKSLDLPKSPGG------RIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA 170
+G ++K D K G + DEWLRV +++A+GDC+ T+
Sbjct: 317 IGTRPVIK--DFMKQIGQVSSQRRALATDEWLRVEGCDNIYALGDCA--------TINQR 366
Query: 171 LAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRYKAL 226
VA +QG YL +R+ + G PF YRHLG A +G +
Sbjct: 367 KVMVAAQQGTYLAKCFDRMEVCEKNPEGPIRIRGEGRHRFRPFRYRHLGQFAPLGGEQTA 426
Query: 227 VDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L + S G S WL W S Y ++ VSWR R V +W F+FGRD SRI
Sbjct: 427 AQLPGDWVSIGHS----SQWL-WYSVYASKQVSWRTRVLVVSDWMRRFIFGRDSSRI 478
>gi|409043621|gb|EKM53103.1| hypothetical protein PHACADRAFT_210820 [Phanerochaete carnosa
HHB-10118-sp]
Length = 558
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 117/314 (37%), Positives = 161/314 (51%), Gaps = 43/314 (13%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
G S+EE RLLH VVVGGGPTGVE SGEL DF+ D+R Y + D I +TL+EA
Sbjct: 253 FPGQSKEEVDRLLHMVVVGGGPTGVELSGELHDFLEDDLRSWYPELADSIKITLVEALPS 312
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILN--DGT--EVPYGLLVWSTG 116
+L F +L Y + + + ++ + +VK++ + ++L D T EVP G++VW+ G
Sbjct: 313 VLPMFSKQLIDYTESTFKAAKIEIMTKTMVKEIKEKSVVLQMPDRTVAEVPCGMVVWAAG 372
Query: 117 VGPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+ + L LP R I +DE LR+ Q VFA+GDC+ T A
Sbjct: 373 NTLRQVTRDLMAKLPAEQTNRRGISVDESLRMNGAQGVFAIGDCTA-------TSYAPTA 425
Query: 173 QVAERQGKYLFSLL------------------------NRIGKAGGGRANSAKDMELGDP 208
QVA ++G YL + R K G AK +E P
Sbjct: 426 QVAAQEGAYLARVFRQLARRDRLAEELDDARRVPDDSAERKAKVEGLERQVAK-VEKIRP 484
Query: 209 FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAV 268
F Y H GS+A IG KA+ DL S L+ AG ++L WRSAYL+++ S RNR VA
Sbjct: 485 FKYSHQGSLAYIGSDKAIADL-PFFSSGNLATAGVATYLFWRSAYLSKLFSLRNRALVAT 543
Query: 269 NWATTFVFGRDISR 282
+W +FGRD+SR
Sbjct: 544 DWIKVKIFGRDVSR 557
>gi|328871032|gb|EGG19404.1| pyridine nucleotide-disulfide oxidoreductase [Dictyostelium
fasciculatum]
Length = 596
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 163/298 (54%), Gaps = 31/298 (10%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY-SHVKDYIHVTLIEA-NEI 62
G E+E RLLH VVVGGGP+GVEF+GEL+DF+ D+ + + H+ D + +TL+EA I
Sbjct: 309 GQPEKEIDRLLHFVVVGGGPSGVEFTGELNDFLREDLSKSFPKHLTDRVRITLVEALPHI 368
Query: 63 LSSFDDRLRHYATTQLSKSGVRLV--RGIVKDVDSQKLIL----NDGTEVPYGLLVWSTG 116
L+ FD +L + +L S + + V +V + +++ + E+PYG+LVW+ G
Sbjct: 369 LTVFDKKLIDHVEKKLQSSPTTKIWTQTAVTNVREKSIVVKGSDKEAREIPYGMLVWAAG 428
Query: 117 VGPSTLVKSLDL---PKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 171
P + L PK R G +DE+ RV ++A+GDC S T +
Sbjct: 429 NCPRKITNDLIASIGPKEQNSRRGLVVDEYFRVKGADGIWAIGDC-----SVTPTPMAPT 483
Query: 172 AQVAERQGKYLFSL-------LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYK 224
AQVA + G+YL L LN++ K + + ++ F YRH+G++ +G
Sbjct: 484 AQVASQSGRYLGRLFNDMANELNQVEKKQMSKDELSGLIKKQPLFKYRHMGTLCFVGDAT 543
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
++ D G + GF ++L+WRSAYL++++S RNR VA +W T +FGRD SR
Sbjct: 544 SVFDY------NGTTGEGFAAFLLWRSAYLSKLLSIRNRTMVANDWVKTSLFGRDTSR 595
>gi|383144389|gb|AFG53687.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144391|gb|AFG53688.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144393|gb|AFG53689.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144395|gb|AFG53690.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144397|gb|AFG53691.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144399|gb|AFG53692.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144401|gb|AFG53693.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144403|gb|AFG53694.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144405|gb|AFG53695.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144407|gb|AFG53696.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144409|gb|AFG53697.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144411|gb|AFG53698.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144413|gb|AFG53699.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
gi|383144415|gb|AFG53700.1| Pinus taeda anonymous locus 2_4292_01 genomic sequence
Length = 87
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 79/87 (90%)
Query: 197 ANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTR 256
A S+ D + G FVY+H GSMA++GRYKALVDLRQ+KE+KG+S+AGF+SW++WRSAYLTR
Sbjct: 1 AGSSSDKDFGKQFVYKHFGSMASVGRYKALVDLRQSKEAKGVSMAGFVSWIMWRSAYLTR 60
Query: 257 VVSWRNRFYVAVNWATTFVFGRDISRI 283
V+SWRNR YVAVNWATTFVFGRDI+RI
Sbjct: 61 VLSWRNRVYVAVNWATTFVFGRDITRI 87
>gi|402771252|ref|YP_006590789.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Methylocystis sp. SC2]
gi|401773272|emb|CCJ06138.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Methylocystis sp. SC2]
Length = 419
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 145/276 (52%), Gaps = 19/276 (6%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFD 67
E+ RLL ++VGGGPTGVE +G +S+ R + + + L+EA IL+SF
Sbjct: 158 ERERLLTIIIVGGGPTGVELAGAISELARRTLPPEFRRADPRKARIILLEAGPRILASFP 217
Query: 68 DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
+RL HYA L SGV + + D + I+ E+P G+++W+ GV S L
Sbjct: 218 ERLSHYARNALESSGVDVRTNLPVDQVFEDRIVAGENEIPAGVILWAAGVRASPAAHWLG 277
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+ GRI + E L VP++ DV+ +GD + + G V PALA A++ GKY
Sbjct: 278 VEGDGAGRIPVSEDLTVPTLPDVYVIGDLALLIGPDGAPV-PALAASAKQMGKY------ 330
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
G+A R + PF YR G++ATIGR A+V L + L L GF WL
Sbjct: 331 -AGRAIRLRLQGRFPRK---PFRYRDYGNLATIGRNSAIVKLGR------LELTGFPGWL 380
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W ++ +V+ R+RF+VA++W T++ G SR+
Sbjct: 381 FWSIVHIYFLVNLRSRFFVAISWIATYLTGNRGSRL 416
>gi|358377620|gb|EHK15303.1| hypothetical protein TRIVIDRAFT_38064 [Trichoderma virens Gv29-8]
Length = 517
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 159/329 (48%), Gaps = 62/329 (18%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEIL 63
+SEEEK LLH VVVGGGPTG+EF+ EL D I D++ Y + + +T+ + A ++L
Sbjct: 201 ALSEEEKRSLLHFVVVGGGPTGIEFAAELHDLIHEDLKAMYPELIPLVRITVYDIAPKVL 260
Query: 64 SSFDDRLRHYATTQLSKSG-----------VRLVRGIVKDVD---SQKLILNDGTEVPYG 109
FD L YA ++ G +R+ G + D S K+ E+ G
Sbjct: 261 PMFDQALAQYAMDTFARQGIEVRTEHHLERIRVADGALGDAHGGLSIKIKEYGDDEINAG 320
Query: 110 LLVWSTGVGPSTLVKSL---------------------DLPKSPG-GRIGIDEWLRV--- 144
L+VWSTG+ + LV+ L L K P G I D +LR
Sbjct: 321 LVVWSTGLMQNPLVEQLVSKEFAIAKDSALEQDKTSLHRLLKDPKTGGIFTDRYLRARIT 380
Query: 145 ----------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGG 194
+ DV+ +GDC+ +E+ LP AQVA +Q YL LN K+
Sbjct: 381 DGQDTAAGTGDVLPDVYVMGDCA-VIEADRS--LPKTAQVASQQAGYLAKQLN---KSTQ 434
Query: 195 GRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYL 254
+N PF +R+ G++ +G +KA+ +S L G+++W+VWR AYL
Sbjct: 435 SLSNPTDVSNSWKPFKFRNWGTLTYLGGWKAI------HQSSADELRGWVAWIVWRGAYL 488
Query: 255 TRVVSWRNRFYVAVNWATTFVFGRDISRI 283
TR +S RN+ V V W +++FGRDISR
Sbjct: 489 TRSMSVRNKLMVPVYWFVSWLFGRDISRF 517
>gi|353234756|emb|CCA66778.1| related to mitochondrial cytosolically directed NADH dehydrogenase
[Piriformospora indica DSM 11827]
Length = 474
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 154/296 (52%), Gaps = 37/296 (12%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L SEE + +LLH VVGGGPTGVEFS EL D I D+ + Y + + ++L + A
Sbjct: 181 LPSTSEERRRQLLHFCVVGGGPTGVEFSAELHDLIHDDLSRHYPSLIPLVSISLYDVAPR 240
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120
ILS FD L YA ++ G+ + R V +D + L + V G++VWSTG+ +
Sbjct: 241 ILSMFDSVLADYAANHFARQGIHVHTRRTVTRIDDGVVHLKEEGPVKCGMIVWSTGLDMT 300
Query: 121 TLVKSLDLPKS--PGGRIGIDEWLRV---------PSV-QDVFAVGDCSGYLESTGKTVL 168
L+K L K GRI D +L + P V DV+A+GDC+ +E L
Sbjct: 301 PLIKELKGVKKDHKAGRIMTDGYLHLLDSASEAEHPKVIPDVYAIGDCA-VIEGDE---L 356
Query: 169 PALAQVAERQGKYLFSLLNRIGK--------AGGGRANSAK------DMELGDPFVYRHL 214
P+ AQVA +QG +L LNR+ K + SA+ D ++G F Y ++
Sbjct: 357 PSTAQVASQQGAWLRRHLNRLAKYEAKAIAAPPKAQETSAETTAVDIDSKVGRGFRYHNI 416
Query: 215 GSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
++A +G + A+ + SKG + G ++W +WR AY+T+ +S RN+ V + W
Sbjct: 417 LTLAYLGSWNAIA-----QRSKGHGIRGRIAWFLWRGAYMTKTISLRNKIRVPLLW 467
>gi|342886618|gb|EGU86394.1| hypothetical protein FOXB_03088 [Fusarium oxysporum Fo5176]
Length = 577
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 175/336 (52%), Gaps = 76/336 (22%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L ++E++ +LLH VVGGGPTG+EF+ EL D + D+ + Y + ++ +T+ + A +
Sbjct: 261 LPSTTDEQRRKLLHFAVVGGGPTGIEFAAELHDLVHDDLARIYPDLMPFVGITVYDIAPK 320
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-----VRGIVKDVDSQ---KLILND-GTEVPYGLLV 112
IL FD +L Y + G+ + ++ I D D + K+ + + EV G++V
Sbjct: 321 ILPMFDKKLSSYTIDTFRRQGIHIKTQHHLQSIRPDEDGKGGLKIKIQEYDDEVGAGIVV 380
Query: 113 WSTGVGPSTLVKSL---DLPKSP---------------------GGRIGIDEWLRV---- 144
WSTG+ + LV L D+ ++P G + +D+ LRV
Sbjct: 381 WSTGLMQNPLVARLVEQDI-RAPVTREEQQLCKQQTWHIVKAEKSGGLVVDDHLRVRVAT 439
Query: 145 --------------PS--VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 188
P+ + +V+A+GDC+ +E + LPA AQVA +Q KYL LN+
Sbjct: 440 GSAQAIDSKSGHSAPNDILPEVYAIGDCA-VME---REALPATAQVASQQAKYLAKALNK 495
Query: 189 IG--KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
G +A G ++ PF++ +LG++A IG ++A+ +S + G L+W
Sbjct: 496 YGFCEAVGNKSK---------PFLFLNLGTIAYIGSWRAIA------QSSSEGVTGRLAW 540
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
++WR AY+TR +S RN+ V V+W T++FGRDISR
Sbjct: 541 VLWRGAYITRSMSIRNKIMVLVHWIMTWLFGRDISR 576
>gi|398408349|ref|XP_003855640.1| hypothetical protein MYCGRDRAFT_107974 [Zymoseptoria tritici
IPO323]
gi|339475524|gb|EGP90616.1| hypothetical protein MYCGRDRAFT_107974 [Zymoseptoria tritici
IPO323]
Length = 578
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 165/319 (51%), Gaps = 52/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
S +E RLLH VVVGGGPTGVEF+GEL DF D+R+ +KD HVTL+EA +L S
Sbjct: 268 SPDEVKRLLHTVVVGGGPTGVEFAGELQDFFENDLRKWIPEIKDNFHVTLVEALPNVLPS 327
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTEV----PYGLLVWSTG 116
F L Y + + + + +VK+V + + + +G +V PYGLLVW+TG
Sbjct: 328 FSKSLIDYTEQTFKEETIDIRTKTMVKNVTEKYIEAEYVDANGQKVLEKIPYGLLVWATG 387
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
LVK L +P R G ++E+L V ++++AVGDC+ + + T A
Sbjct: 388 NALRPLVKDLMSQIPAQKESRRGLAVNEYLVVKGTENIWAVGDCA--IANYAPT-----A 440
Query: 173 QVAERQGKYLFSLLNRIGKA--------------GGGRANSAKDMELGD----------- 207
QVA ++G +L L N++ K G A+ D
Sbjct: 441 QVASQEGAFLARLFNQMAKTEEIESQLLSLSEAQGNAPNKEARQQAFEDIKDLQKRLRRV 500
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GSMA IG KA+ D+ + + L+ G L++L WRSAYL+ S RNR
Sbjct: 501 KQMGPFEYSHQGSMAYIGSEKAVADI--SWLTGNLASGGQLTYLFWRSAYLSMCFSSRNR 558
Query: 264 FYVAVNWATTFVFGRDISR 282
V V+W +++FGRD+SR
Sbjct: 559 ILVFVDWFKSYLFGRDVSR 577
>gi|290979469|ref|XP_002672456.1| predicted protein [Naegleria gruberi]
gi|284086033|gb|EFC39712.1| predicted protein [Naegleria gruberi]
Length = 491
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 156/277 (56%), Gaps = 34/277 (12%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYS-HVKDYIHVTLIEA-NEILSSFDD 68
+ LLH V+VG G TGVEF+ E D I RD+ + + + + + +T+IEA + +LS+FD
Sbjct: 243 RETLLHFVIVGAGATGVEFAAECHDLI-RDLSRNFPPEIMEEVSMTVIEAGSTVLSAFDS 301
Query: 69 RLRHYATTQLSKSGVRL-VRGIVKDVDS-QKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
L+ Y ++ +++ VK+V S L L DG+ + G++VWS + +
Sbjct: 302 SLQKYTQKFFRRNHIKIRTNQQVKEVLSPNSLKLQDGSIIECGMIVWSAEIS-----QGR 356
Query: 127 DLPKSPG-GRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
LP P +I +D+ L V +++A+GD S +E+ L A AQVA++QG Y+
Sbjct: 357 QLPIDPKTKKIIVDDHLHVKGFDNIWALGDIS-LIETVP---LAATAQVAQQQGLYVARH 412
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
LN ++E PFVY H+G +A IG Y+A+ + + GFLS
Sbjct: 413 LN-------------GEIEESKPFVYHHMGQLAYIGNYRAI------SQVGAVKSGGFLS 453
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
WL WRSAY+TR+VS RN+F V +NW +TF FGRDISR
Sbjct: 454 WLFWRSAYMTRLVSIRNKFNVLLNWTSTFWFGRDISR 490
>gi|321250435|ref|XP_003191806.1| NADH dehydrogenase [Cryptococcus gattii WM276]
gi|317458273|gb|ADV20019.1| NADH dehydrogenase, putative [Cryptococcus gattii WM276]
Length = 565
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 162/305 (53%), Gaps = 39/305 (12%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
++E RL+H VVVGGGPTGVE++GEL DF++ D+++ Y + D + +TLIEA +L +F
Sbjct: 269 QDEIDRLMHMVVVGGGPTGVEYAGELHDFLIDDLKKWYPEIADRLKITLIEALPNVLPAF 328
Query: 67 DDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPST 121
+L Y + ++ + L R +VKDV Q +++ D E+PYGLLVW+TG
Sbjct: 329 SKQLIEYTESTFKENKIDVLTRTMVKDVKPQSVVVQDANKEIREIPYGLLVWATGNTSRN 388
Query: 122 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
+ + L L R G +D+ L + + V+AVGDC+ T AQVA +
Sbjct: 389 ITRDLMTKLSHVQTQRRGLLVDDNLALLGAEGVYAVGDCTA-------TSYAPTAQVASQ 441
Query: 178 QGKYLFSLLNRIGKAG-------GGRANSAKDMELGD-------------PFVYRHLGSM 217
QG YL S+ ++G+ RA+ D + PF Y H GS+
Sbjct: 442 QGIYLASIFQKLGQKAKLEKQLAALRADPTADASEIESLTKKVNRASKITPFHYSHQGSL 501
Query: 218 ATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFG 277
A IG KA+ DLR + ++ G + L WRSAY++ + S RNR V +W +FG
Sbjct: 502 AYIGSEKAIADLRLF--NGNVASGGSAAMLFWRSAYVSTLYSVRNRTLVLTDWVKVKLFG 559
Query: 278 RDISR 282
RD+SR
Sbjct: 560 RDVSR 564
>gi|384483903|gb|EIE76083.1| hypothetical protein RO3G_00787 [Rhizopus delemar RA 99-880]
Length = 529
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/308 (35%), Positives = 162/308 (52%), Gaps = 40/308 (12%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
G SEEE RLLH VVVGGGPTGVE++ EL DF++ D+ Y + I +TL+EA
Sbjct: 233 FPGQSEEEIERLLHMVVVGGGPTGVEYAAELHDFLVDDLTAWYPELAGKIKITLVEAMPN 292
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN--DGT--EVPYGLLVWSTG 116
+L +F +L Y + + + + + +VK+V +++I+ DG +PYGLLVW+TG
Sbjct: 293 VLPAFSKQLIDYTESTFKEQHIDIHTKTMVKEVKEKEIIIQGPDGKMDTMPYGLLVWATG 352
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
LV+ L P++ R G +D+WLR+ +D++A+GDC+ T A
Sbjct: 353 NTSRPLVRDLMAQYPEAQNVRRGLVVDDWLRMTGTEDIYALGDCTA-------TKYAPTA 405
Query: 173 QVAERQGKYLFSLLNRIGKAGGGRA------------------NSAKDMELGDPFVYRHL 214
QVA +QGKYL + ++ A A+D++ PF Y H
Sbjct: 406 QVAAQQGKYLARVFAQLHATECHEAALEEVTTDEEKTKIMRKLQKAQDIK---PFQYSHQ 462
Query: 215 GSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
GS+ IG KA+ DL L+ G ++ WRSAY++ + S RNR+ V +W
Sbjct: 463 GSLCYIGSDKAIADLPLG--PGNLASGGVATFAFWRSAYISNIFSARNRWLVITDWTKKT 520
Query: 275 VFGRDISR 282
+GRDISR
Sbjct: 521 FWGRDISR 528
>gi|346327253|gb|EGX96849.1| pyridine nucleotide-disulfide oxidoreductase, putative [Cordyceps
militaris CM01]
Length = 456
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 157/310 (50%), Gaps = 52/310 (16%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L ++ +++ LLH +VGGGPTG+EF+ EL D + D+ + Y + ++ VT+ + A +
Sbjct: 170 LPSATDAQRAELLHFAIVGGGPTGIEFAAELHDLVHEDLAKLYPALMRFVRVTVYDIAPK 229
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL--------VRGIVKDVDSQKLILNDGTEVPYGLLVW 113
+L FD L YA + G+ + +R + +L +D EV GLLVW
Sbjct: 230 VLPMFDQALASYAMDLFRRQGIEVKTEHSLQSIRRTDDGILKLRLKGHDA-EVGAGLLVW 288
Query: 114 STGVGPSTLVKSLDLPKSPG----------GRIGIDEWLRVPS----------VQDVFAV 153
STG+ + LV L PG G I D +RV + + DV+A+
Sbjct: 289 STGLMQNPLVARLLRQDIPGLGRIVEDDRTGGITTDGAMRVLTRPVGGGAPVPLPDVYAI 348
Query: 154 GDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRH 213
GDC+ + LPA AQVA +Q +L G R NS G+ F++R+
Sbjct: 349 GDCTVQVAHR----LPATAQVASQQATWL-----------GKRINSGNANADGE-FIFRN 392
Query: 214 LGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATT 273
G+MA +G +A+ QN L G+ +W++WR+AYLT+ +SWRN+ + + W T
Sbjct: 393 WGAMAYLGSKRAI---HQNGAD---GLRGWPAWILWRTAYLTKSMSWRNKLKIPLQWLIT 446
Query: 274 FVFGRDISRI 283
+FGRDISR
Sbjct: 447 ALFGRDISRF 456
>gi|389629700|ref|XP_003712503.1| hypothetical protein MGG_04999 [Magnaporthe oryzae 70-15]
gi|351644835|gb|EHA52696.1| hypothetical protein MGG_04999 [Magnaporthe oryzae 70-15]
Length = 518
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 156/314 (49%), Gaps = 57/314 (18%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
IS+E+K LLH VVGGGPTG+EF+ EL D I D+ + Y + + +T+ + A +L
Sbjct: 226 ISDEQKRELLHFAVVGGGPTGIEFAAELHDLIYEDLIKVYPGLVPLVRITVYDIAPAVLP 285
Query: 65 SFDDRLRHYATTQLSKSGVRL-----VRGIVKDVDSQKLILND--GTEVPYGLLVWSTGV 117
FD L YA ++ G+ + ++ I + D KL + + EV G++VWSTG+
Sbjct: 286 MFDKELAGYAMELFNRRGIEIRTEHHLQAIRAEGDGLKLKIKEHGDQEVGAGMVVWSTGL 345
Query: 118 GPSTLVKSL---------DLPKSP--------GGRIGIDEWLRV-----------PSVQD 149
LVK L P SP G I D +R P + D
Sbjct: 346 MQHPLVKKLVDNQVHDQGSNPNSPLRLKSDPKTGAIVTDGHMRAQITENASRGQSPRMDD 405
Query: 150 VFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPF 209
VF +GDC+ + E+ LP QVA +Q YL LN + +++ PF
Sbjct: 406 VFVIGDCA-FCEADQS--LPKTGQVASQQAVYLAKALN------------SGNLDESKPF 450
Query: 210 VYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVN 269
+R+ G+MA +G ++A+ +S L G +W++WR+AYLT+ +S RN+ V
Sbjct: 451 SFRNWGTMAYLGGWRAI------HQSSADELKGRAAWVLWRTAYLTKSLSVRNKIIVPFF 504
Query: 270 WATTFVFGRDISRI 283
W +++FGRDISR
Sbjct: 505 WFISWLFGRDISRF 518
>gi|449541457|gb|EMD32441.1| hypothetical protein CERSUDRAFT_118779 [Ceriporiopsis subvermispora
B]
Length = 554
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 161/313 (51%), Gaps = 42/313 (13%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
G S+ E RLLH VVVGGGPTGVE SGE+ DF+ D+R Y + ++I ++L+EA
Sbjct: 250 FPGQSQAEIDRLLHVVVVGGGPTGVELSGEIHDFLEEDLRSWYPELANHIRISLVEALPS 309
Query: 62 ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGTEVPYGLLVWSTG 116
+L SF +L Y + ++ + L + +VK+V + ++L EVP GL+VW+ G
Sbjct: 310 VLPSFSKQLIEYTESTFKEAKIDILTKTMVKEVREKSVVLQMPDKSIVEVPCGLVVWAAG 369
Query: 117 VGPSTLVKSL--DLPKSPGGRIGI--DEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPAL 171
+ + L LPK R GI DE+LR+ +FAVGDC+ T
Sbjct: 370 NTHRKITRDLMAKLPKHQTNRRGITVDEYLRMAGTDGSIFAVGDCTA-------TSYAPT 422
Query: 172 AQVAERQGKYLFSLLNRIGKAGGGRAN--------------SAKD--------MELGDPF 209
AQVA +QG+YL + ++ K + + KD E PF
Sbjct: 423 AQVANQQGRYLARVFEQLAKRDALQQRLQAIEAAPAAEEAKAEKDSVQKQLAKAEKLRPF 482
Query: 210 VYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVN 269
Y H GS+A IG KA+ DL L+ G ++L WRSAY++ + SWRNR V +
Sbjct: 483 HYSHQGSLAYIGSEKAIADL--PFFGGNLATGGVATFLFWRSAYISNLFSWRNRVLVLTD 540
Query: 270 WATTFVFGRDISR 282
WA +FGRD+SR
Sbjct: 541 WAKVKLFGRDVSR 553
>gi|440474290|gb|ELQ43039.1| external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor
[Magnaporthe oryzae Y34]
gi|440486390|gb|ELQ66263.1| external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor
[Magnaporthe oryzae P131]
Length = 521
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 156/314 (49%), Gaps = 57/314 (18%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
IS+E+K LLH VVGGGPTG+EF+ EL D I D+ + Y + + +T+ + A +L
Sbjct: 229 ISDEQKRELLHFAVVGGGPTGIEFAAELHDLIYEDLIKVYPGLVPLVRITVYDIAPAVLP 288
Query: 65 SFDDRLRHYATTQLSKSGVRL-----VRGIVKDVDSQKLILND--GTEVPYGLLVWSTGV 117
FD L YA ++ G+ + ++ I + D KL + + EV G++VWSTG+
Sbjct: 289 MFDKELAGYAMELFNRRGIEIRTEHHLQAIRAEGDGLKLKIKEHGDQEVGAGMVVWSTGL 348
Query: 118 GPSTLVKSL---------DLPKSP--------GGRIGIDEWLRV-----------PSVQD 149
LVK L P SP G I D +R P + D
Sbjct: 349 MQHPLVKKLVDNQVHDQGSNPNSPLRLKSDPKTGAIVTDGHMRAQITENASRGQSPRMDD 408
Query: 150 VFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPF 209
VF +GDC+ + E+ LP QVA +Q YL LN + +++ PF
Sbjct: 409 VFVIGDCA-FCEADQS--LPKTGQVASQQAVYLAKALN------------SGNLDESKPF 453
Query: 210 VYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVN 269
+R+ G+MA +G ++A+ +S L G +W++WR+AYLT+ +S RN+ V
Sbjct: 454 SFRNWGTMAYLGGWRAI------HQSSADELKGRAAWVLWRTAYLTKSLSVRNKIIVPFF 507
Query: 270 WATTFVFGRDISRI 283
W +++FGRDISR
Sbjct: 508 WFISWLFGRDISRF 521
>gi|456735021|gb|EMF59791.1| NADH dehydrogenase [Stenotrophomonas maltophilia EPM1]
Length = 426
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 143/268 (53%), Gaps = 21/268 (7%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFD 67
+K+ L VVGGGPTGVE +G L++ +R + H+ V L+EA +LSSF
Sbjct: 155 KKAAWLSFAVVGGGPTGVELAGTLAEIARHTLRNEFRHIDPASAKVRLVEAGPRVLSSFP 214
Query: 68 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
+ L A QL K GV ++ G V D+DSQ L D VP +VW+ GV S L ++L
Sbjct: 215 EVLSLKARRQLEKLGVEVLTGTPVSDIDSQGFTLGD-QFVPARTVVWAAGVAASPLARTL 273
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
D+P GR+ + L +P ++F GD + ++ GK V P +A A++ GKY+ ++
Sbjct: 274 DVPLDRAGRVPVQPDLTLPDHPELFVAGDLAALTQADGKPV-PGVAPAAKQMGKYVAEVI 332
Query: 187 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
RA E G PF Y G++ATIGR A+V L + L L+G L+W
Sbjct: 333 ---------RARLHGKPEPG-PFKYADYGNLATIGRMAAIVHLGR------LQLSGVLAW 376
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTF 274
W +A++ ++ +RNR V +NWA +
Sbjct: 377 WFWLAAHVFFLIGFRNRIVVLLNWAVAY 404
>gi|212538363|ref|XP_002149337.1| alternative NADH-dehydrogenase [Talaromyces marneffei ATCC 18224]
gi|210069079|gb|EEA23170.1| alternative NADH-dehydrogenase [Talaromyces marneffei ATCC 18224]
Length = 584
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 166/319 (52%), Gaps = 52/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+E+E RLLH VVVGGGPTGVEF+GEL DF D+R+ ++D HVTL+EA IL
Sbjct: 274 TEDEVKRLLHMVVVGGGPTGVEFAGELQDFFEEDLRKWIPGIQDNFHVTLVEALPNILPM 333
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGT----EVPYGLLVWSTG 116
F +L Y + + + + + +VK V + ++ DGT ++PYGLLVW+TG
Sbjct: 334 FSKQLIEYTESSFKEEKITIRTKTMVKKVTDKYIEAEVTKPDGTKELEKIPYGLLVWATG 393
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+VK L +P R G ++E+L V ++++AVGDC+ T A
Sbjct: 394 NAVRNVVKDLMSQIPAQKNSRRGLAVNEFLVVNGTENIWAVGDCAI-------TNYAPTA 446
Query: 173 QVAERQGKYLFSLLNRIGKAGG--------------GRANSAKDMELGD----------- 207
QVA ++G +L L N + K + + A++ +
Sbjct: 447 QVASQEGAFLARLFNTMAKTEALEDELKKLSVAQQEAKNDEARNEIFAEIKERQRQLRRT 506
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ V S RNR
Sbjct: 507 KQIGPFQYSHQGSLAYIGKERAVADI--SWVSGNIASGGTMTYLFWRSAYLSMVFSARNR 564
Query: 264 FYVAVNWATTFVFGRDISR 282
VA +W +FGRD+SR
Sbjct: 565 ILVATDWIKAKIFGRDVSR 583
>gi|254566619|ref|XP_002490420.1| Mitochondrial external NADH dehydrogenase, a type II
NAD(P)H:quinone oxidoreductase [Komagataella pastoris
GS115]
gi|238030216|emb|CAY68139.1| Mitochondrial external NADH dehydrogenase, a type II
NAD(P)H:quinone oxidoreductase [Komagataella pastoris
GS115]
gi|328350814|emb|CCA37214.1| NADH dehydrogenase [Komagataella pastoris CBS 7435]
Length = 569
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 153/304 (50%), Gaps = 38/304 (12%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFD 67
EE+ RLL VV GGGPTGVE + E+ D+I D+ + +++ + VTL+EA +L++F+
Sbjct: 273 EERKRLLSVVVCGGGPTGVELAAEIKDYIDEDLSRFVPGIENEMSVTLVEALPNVLNAFN 332
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLIL--------NDGTEVPYGLLVWSTGVG 118
+L Y + K + L V +VK VD + + + +PYG LVW+TG G
Sbjct: 333 HKLIEYTESIFEKQQLDLRVNTMVKKVDDKNVYATVKKSGGDTENVTIPYGTLVWATGNG 392
Query: 119 PSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
P L K++ + + R G I E L V VFA+GDC+ T P AQV
Sbjct: 393 PRPLTKAVAAQIEEQKTARRGLLIGEHLLVDGTDSVFALGDCTF-------TKNPPTAQV 445
Query: 175 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----------------PFVYRHLGSMA 218
A ++G YL S L ++ K + ++ + PF Y H G++A
Sbjct: 446 AHQEGIYLASHLAKLSKIDDLKYEIGQNTDPEQLVRLQRRLDRTQASILPFKYTHQGALA 505
Query: 219 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
IG +A+ DL S +S G L++L WRSAY++ ++ R + V +W VFGR
Sbjct: 506 YIGSERAVADLVWGDWS-NVSTGGSLTFLFWRSAYVSMMLGVRTKILVVSDWIKVKVFGR 564
Query: 279 DISR 282
D S+
Sbjct: 565 DCSK 568
>gi|403213744|emb|CCK68246.1| hypothetical protein KNAG_0A05830 [Kazachstania naganishii CBS
8797]
Length = 564
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 156/306 (50%), Gaps = 40/306 (13%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILS 64
+ + + +LL+ +VVGGGPTGVEF+ EL DF+ +D+++ + + ++L+EA IL+
Sbjct: 268 VGDTRRKQLLNFLVVGGGPTGVEFAAELQDFVKQDLKKWLPELSKEVKISLVEALPSILN 327
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLIL-NDGTEV--PYGLLVWSTGVGPS 120
FD L Y T L + L + +VK V ++ N+G EV PYGLLVWSTG P
Sbjct: 328 MFDQSLIDYTQTLLKHENIDLKLNTMVKKVTKNSIVASNEGKEVEIPYGLLVWSTGNKPR 387
Query: 121 TLVKSL--DLPKSPGGR-IGIDEWLRVPSVQD-VFAVGDCS---GYLESTGKTVLPALAQ 173
L + + L + R + I++ L++ +D ++A+GDC+ G++ + AQ
Sbjct: 388 VLTQKIMSKLEEQTDRRGLLINDNLQLLGAEDSIYALGDCTFHPGFVPT---------AQ 438
Query: 174 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD------------------PFVYRHLG 215
VA ++G+YL L + K + + EL F Y H+G
Sbjct: 439 VAYQEGRYLAKTLEALFKVEQIKWELDNNQELPTKKIVRLQKELSKHESSIVAFQYSHMG 498
Query: 216 SMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
++A IG KA+ DL LS L W W+S YLT +S RNR V +W ++
Sbjct: 499 TLAYIGSEKAIADLNIAGSQYKLSGGPLLYWF-WKSVYLTMCISLRNRVMVTADWINAYI 557
Query: 276 FGRDIS 281
FGRD S
Sbjct: 558 FGRDSS 563
>gi|119495566|ref|XP_001264565.1| alternative NADH-dehydrogenase [Neosartorya fischeri NRRL 181]
gi|119412727|gb|EAW22668.1| alternative NADH-dehydrogenase [Neosartorya fischeri NRRL 181]
Length = 571
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 165/318 (51%), Gaps = 52/318 (16%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
EEE RLLH VVVGGGPTGVEF+GEL DF D+++ +KD HVTL+EA +L F
Sbjct: 262 EEEVKRLLHMVVVGGGPTGVEFAGELQDFFNEDLKKWIPEIKDNFHVTLVEALPNVLPMF 321
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTGV 117
+L Y + + + + + +VK+V + ++ DGT+ +PYGLLVW+TG
Sbjct: 322 SKQLIDYTESTFKEEAITIRTKTMVKNVTDKYIEAEVTKPDGTKELETIPYGLLVWATGN 381
Query: 118 GPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
+V+ L +P R G ++E+L V ++V+AVGDC+ T AQ
Sbjct: 382 AVRNVVRDLMNQIPAQKNSRRGLAVNEYLVVNGAENVWAVGDCAV-------TNYAPTAQ 434
Query: 174 VAERQGKYLFSLLNRIGK-------------AGGGRANSAKDMELGD------------- 207
VA ++G +L L N + K A N + ++ D
Sbjct: 435 VASQEGAFLARLFNTMAKTEAIEKELKKLSEAQAEAKNEEERNKIFDEIRERQKQLRRTK 494
Query: 208 ---PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRF 264
PF Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ S RNR
Sbjct: 495 QIGPFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTVTYLFWRSAYLSMCFSTRNRV 552
Query: 265 YVAVNWATTFVFGRDISR 282
VA +W +FGRD+SR
Sbjct: 553 LVAADWLKAKIFGRDVSR 570
>gi|58259403|ref|XP_567114.1| NADH dehydrogenase [Cryptococcus neoformans var. neoformans JEC21]
gi|134107485|ref|XP_777627.1| hypothetical protein CNBA7480 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260321|gb|EAL22980.1| hypothetical protein CNBA7480 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223251|gb|AAW41295.1| NADH dehydrogenase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 565
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 162/305 (53%), Gaps = 39/305 (12%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
++E RL+H VVVGGGPTGVE++GEL DF++ D+++ Y V D + +TLIEA +L +F
Sbjct: 269 QDEIDRLMHMVVVGGGPTGVEYAGELHDFLIDDLKKWYPEVADRLKITLIEALPNVLPAF 328
Query: 67 DDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPST 121
+L Y + ++ + L R +VKDV +Q +I+ D E+PYGLLVW+TG
Sbjct: 329 SKQLIEYTESTFKENKIDVLTRTMVKDVKAQSVIVQDANKEIKEIPYGLLVWATGNTSRN 388
Query: 122 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
+ + L L R G +D+ L + V+AVGDC+ T AQVA +
Sbjct: 389 ITRDLMTKLSHVQTQRRGLLVDDNLSLLGADGVYAVGDCTA-------TSYAPTAQVASQ 441
Query: 178 QGKYLFSLLNRIGKA-------GGGRANSAKDMELGD-------------PFVYRHLGSM 217
QG YL ++ ++G+ RA+ D + PF Y H GS+
Sbjct: 442 QGIYLANIFQKLGQKTKLEKQLAALRADPTADASEIESLTKKVNRASKITPFHYSHQGSL 501
Query: 218 ATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFG 277
A IG KA+ DLR + ++ G + L WRSAY++ + S RNR V +W +FG
Sbjct: 502 AYIGSEKAIADLRLF--NGNVASGGSAAMLFWRSAYVSTLYSVRNRTLVLTDWLKVKLFG 559
Query: 278 RDISR 282
RD+SR
Sbjct: 560 RDVSR 564
>gi|149246484|ref|XP_001527696.1| hypothetical protein LELG_00216 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146447650|gb|EDK42038.1| hypothetical protein LELG_00216 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 570
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 156/300 (52%), Gaps = 33/300 (11%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSF 66
+ E+ RLLH +V GGGPTGVE +GE+ D+I +D+++ V + VTL+E+ ++L +F
Sbjct: 278 DPERKRLLHVIVCGGGPTGVEAAGEIQDYIDQDLKKWVPDVAKDLKVTLVESQPKVLHTF 337
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLIL----NDGTE-VPYGLLVWSTGVG-- 118
+ +L Y ++ + LV + VD + + TE +PYG+L+W+TG
Sbjct: 338 NPKLVEYTNQIFKETNINLVTDTRITHVDDHYVTAFHKSSKQTEIIPYGMLIWATGNATR 397
Query: 119 --PSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
L+ +D KS ID+ L++ +++FA+GDC+ + P AQVA
Sbjct: 398 DFTHVLMSKIDAQKSAKRGFLIDDNLKLKGSKNIFALGDCTF-------SKYPPTAQVAF 450
Query: 177 RQGKYLFSLLNRIGKAGGGRANSAKDMELGD--------------PFVYRHLGSMATIGR 222
++G+YL ++ K + A D + + F+Y + GS+A IG
Sbjct: 451 QEGQYLAKYFEKLQKLESLKYRIANDPDASEFLKQRADRLEGNLPKFIYNYQGSLAYIGS 510
Query: 223 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
KA+ DL S +S G +++L WRSAY+ +S +N+ V V+W +FGR+ SR
Sbjct: 511 EKAVADLAWGSWS-NVSTGGNMTFLFWRSAYIYMCLSVKNQILVCVDWLKVSLFGRECSR 569
>gi|190576026|ref|YP_001973871.1| pyridine nucleotide-disulfide oxidoreductase [Stenotrophomonas
maltophilia K279a]
gi|190013948|emb|CAQ47588.1| putative pyridine nucleotide-disulphide oxidoreductase
[Stenotrophomonas maltophilia K279a]
Length = 426
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 143/268 (53%), Gaps = 21/268 (7%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFD 67
+K+ L VVGGGPTGVE +G L++ +R + H+ V L+EA +LSSF
Sbjct: 155 KKAAWLSFAVVGGGPTGVELAGTLAEIARHTLRNEFRHIDPASAKVRLVEAGPRVLSSFP 214
Query: 68 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
+ L A QL K GV ++ G V D+DSQ L D VP +VW+ GV S L ++L
Sbjct: 215 EVLSLKARRQLEKLGVEVLTGTPVSDIDSQGFTLGD-QFVPARTVVWAAGVAASPLARTL 273
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
D+P GR+ + L +P ++F GD + ++ GK V P +A A++ GKY+ ++
Sbjct: 274 DVPLDRAGRVPVQPDLTLPDHPELFVAGDLAALSQADGKPV-PGVAPAAKQMGKYVAEVI 332
Query: 187 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
RA E G PF Y G++ATIGR A+V L + L L+G L+W
Sbjct: 333 ---------RARLHGKPEPG-PFKYADYGNLATIGRMAAIVHLGR------LQLSGVLAW 376
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTF 274
W +A++ ++ +RNR V +NWA +
Sbjct: 377 WFWLAAHVFFLIGFRNRIVVLLNWAVAY 404
>gi|146415808|ref|XP_001483874.1| hypothetical protein PGUG_04603 [Meyerozyma guilliermondii ATCC
6260]
Length = 612
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 161/304 (52%), Gaps = 37/304 (12%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E+ RLL+ VV GGGPTGVE +GEL D+I +D+ + V + VT++EA + +L++F
Sbjct: 316 DPERKRLLNIVVCGGGPTGVEVAGELQDYIDQDLTKWMPEVASDLKVTVVEAKSRVLNTF 375
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLI-------LNDGTEVPYGLLVWSTGVG 118
D L HY + + L +K+V+ + ++ ++ E PYGLL+W+TG
Sbjct: 376 SDNLVHYTQDIFQDTNIDLRTDTRIKEVNDRMVMGTRHAKGGDEYVEFPYGLLIWATGNA 435
Query: 119 PSTLVKSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
P +V SL D ++ + +D+ L V +++A+GDCS + AQV
Sbjct: 436 PRGIVTSLFSKIDAQRNAKHGLFVDDRLLVNGTDNIYALGDCSTLKYA-------PTAQV 488
Query: 175 AERQGKYL---FSLLNRIG----KAGGGRANSAKD--------MELGDP-FVYRHLGSMA 218
A ++G +L F L+ I + AN + ++ P FVY H GS+A
Sbjct: 489 AFQEGIFLGKHFKALHEIDTLNYRIENAHANDNVESLKRRVDRLQKNLPIFVYNHKGSLA 548
Query: 219 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
IG +A+ DL SK +S G ++L WRSAY+ +S +N+ V ++WA ++FGR
Sbjct: 549 YIGSERAVADLVWGSWSK-VSTGGSFTFLFWRSAYIYMCLSVKNQILVCIDWAKVYMFGR 607
Query: 279 DISR 282
D S+
Sbjct: 608 DCSK 611
>gi|190348111|gb|EDK40505.2| hypothetical protein PGUG_04603 [Meyerozyma guilliermondii ATCC
6260]
Length = 612
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 161/304 (52%), Gaps = 37/304 (12%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E+ RLL+ VV GGGPTGVE +GEL D+I +D+ + V + VT++EA + +L++F
Sbjct: 316 DPERKRLLNIVVCGGGPTGVEVAGELQDYIDQDLTKWMPEVASDLKVTVVEAKSRVLNTF 375
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLI-------LNDGTEVPYGLLVWSTGVG 118
D L HY + + L +K+V+ + ++ ++ E PYGLL+W+TG
Sbjct: 376 SDNLVHYTQDIFQDTNIDLRTDTRIKEVNDRMVMGTRHAKGGDEYVEFPYGLLIWATGNA 435
Query: 119 PSTLVKSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
P +V SL D ++ + +D+ L V +++A+GDCS + AQV
Sbjct: 436 PRGIVTSLFSKIDAQRNAKHGLFVDDRLLVNGTDNIYALGDCSTLKYA-------PTAQV 488
Query: 175 AERQGKYL---FSLLNRIG----KAGGGRANSAKD--------MELGDP-FVYRHLGSMA 218
A ++G +L F L+ I + AN + ++ P FVY H GS+A
Sbjct: 489 AFQEGIFLGKHFKALHEIDTLNYRIENAHANDNVESLKRRVDRLQKNLPIFVYNHKGSLA 548
Query: 219 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
IG +A+ DL SK +S G ++L WRSAY+ +S +N+ V ++WA ++FGR
Sbjct: 549 YIGSERAVADLVWGSWSK-VSTGGSFTFLFWRSAYIYMCLSVKNQILVCIDWAKVYMFGR 607
Query: 279 DISR 282
D S+
Sbjct: 608 DCSK 611
>gi|424670339|ref|ZP_18107364.1| hypothetical protein A1OC_03958 [Stenotrophomonas maltophilia
Ab55555]
gi|401070797|gb|EJP79311.1| hypothetical protein A1OC_03958 [Stenotrophomonas maltophilia
Ab55555]
Length = 426
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 143/268 (53%), Gaps = 21/268 (7%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFD 67
+K+ L VVGGGPTGVE +G L++ +R + H+ V L+EA +LSSF
Sbjct: 155 KKAAWLSFAVVGGGPTGVELAGTLAEIARHTLRNEFRHIDPASAKVRLVEAGPRVLSSFP 214
Query: 68 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
+ L A QL K GV ++ G V D+DSQ L D VP +VW+ GV S L ++L
Sbjct: 215 EVLSLKARRQLEKLGVEVLTGTPVSDIDSQGFTLGD-QFVPARTVVWAAGVAASPLARTL 273
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
D+P GR+ + L +P ++F GD + ++ GK V P +A A++ GKY+ ++
Sbjct: 274 DVPLDRAGRVPVQPDLTLPDHPELFVAGDLAALSQADGKPV-PGVAPAAKQMGKYVAEVI 332
Query: 187 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
RA E G PF Y G++ATIGR A+V L + L L+G L+W
Sbjct: 333 ---------RARLHGKPEPG-PFKYADYGNLATIGRMAAIVHLGR------LQLSGVLAW 376
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTF 274
W +A++ ++ +RNR V +NWA +
Sbjct: 377 WFWLAAHVFFLIGFRNRIVVLLNWAVAY 404
>gi|430813884|emb|CCJ28803.1| unnamed protein product [Pneumocystis jirovecii]
Length = 495
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 158/323 (48%), Gaps = 57/323 (17%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
G +++EK RLL+ +VVGGGPTGVEF+ EL DF D+++ + + + V LIE
Sbjct: 187 FEGQTDDEKQRLLNMIVVGGGPTGVEFAAELHDFFEADLKKWFPEISNIFKVKLIEMLPS 246
Query: 62 ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGTE----VPYGLLV 112
+L F L +Y + L R IVK V + +I+ D + +PYGLLV
Sbjct: 247 VLPMFPKTLINYTEAAFKGQNIEILTRSIVKGVTDKYIIVETVAPDNKKMIQRIPYGLLV 306
Query: 113 WSTGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVL 168
W+TG P ++K L +P+ G G ++++L V ++++A+GDC+ T
Sbjct: 307 WATGNSPRNVIKDLVSKIPEQNGSFRGLLVNDYLVVKGTENIWALGDCTA-------TKY 359
Query: 169 PALAQVAERQGKYLFSLLNRIGKAGGGRAN---------------SAKDMELGD------ 207
AQVA +QG+YL L + + + + K+M D
Sbjct: 360 APTAQVASQQGEYLAKLFDTLAEFRKVKKEIRYLEKLLETDSINFENKEMIKKDVNIKIK 419
Query: 208 --------PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVS 259
PF + + GS+A IG KA+ DL +K S S+ G +++L WRS Y +
Sbjct: 420 KMERLSILPFEFLYRGSLAYIGNDKAIADLSFSKGS--FSMFGTVAFLFWRSVY-----A 472
Query: 260 WRNRFYVAVNWATTFVFGRDISR 282
RNR V ++W +FGRD+ R
Sbjct: 473 IRNRVLVCLDWIKVSIFGRDVKR 495
>gi|406864136|gb|EKD17182.1| hypothetical protein MBM_04759 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 500
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 165/338 (48%), Gaps = 82/338 (24%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSS 65
SE+ + +LL+ VVGGGPTGVEF+ EL D D+++ Y + +I +++ + A +IL
Sbjct: 184 SEKLRDQLLNFAVVGGGPTGVEFAAELFDLCHEDLKKLYPQLIPHIKISIYDVATKILPM 243
Query: 66 FDDRLRHYATTQLSKSGVRL-----VRGIVKDVDSQKLILNDG----------TEVPYGL 110
FD L YA + G+++ ++ + + NDG EV G+
Sbjct: 244 FDASLAKYAIDLFRRDGIQIKTEHHIQSLRPGLPGSDNPDNDGGCFTLKTKEDGEVGVGM 303
Query: 111 LVWSTGVGPSTLVK-SLD----LP------------KSPG------------GRIGIDEW 141
VWSTG+ + V+ +LD P +SPG G + +DE
Sbjct: 304 CVWSTGLMMNPFVQAALDDVHTYPTTSATLAPGTEMESPGTEKWHLKRHPRSGNLMVDER 363
Query: 142 LRV----------------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
RV ++QDVFA+GD S + KT LPA AQVA ++ K+L
Sbjct: 364 FRVKLTSRSSAPTDQNVPEATMQDVFAIGDVS----AMEKTQLPATAQVANQEAKWL--- 416
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
G R N E G F +++LG M +G +KA++ Q + KG+ G ++
Sbjct: 417 --------GKRLNQGTLTE-GAGFNFKNLGVMTYLGNWKAVM---QADDGKGIK--GRMA 462
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W++WR AYLT+ VSWRNR + + W ++FGRDISR
Sbjct: 463 WIIWRGAYLTQTVSWRNRILIPIYWCINWIFGRDISRF 500
>gi|299116714|emb|CBN76274.1| NADH dehydrogenase (ubiquinone) (Partial) [Ectocarpus siliculosus]
Length = 350
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 117/185 (63%), Gaps = 6/185 (3%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS 64
ISEEE+SRLL VVVGGGPT +E++ EL DF+ DV++ Y ++ + V L+EA++ I+
Sbjct: 166 ISEEERSRLLSFVVVGGGPTSIEYAAELHDFLRTDVKRWYPDLEHKVSVHLVEASDHIMG 225
Query: 65 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
SFD++L Y T L V L+ V V + L DG ++P+GL+VWSTG+ P+ LV
Sbjct: 226 SFDEKLISYTTRLLENRKVEVLLNTSVASVGPTECTLGDGRKLPFGLIVWSTGLAPTELV 285
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
S++ + GRI ID LRVP + VFA+GD + E+ L LAQVA++QGKYL
Sbjct: 286 SSMEGVEKERGRINIDGRLRVPGMDGVFAMGDAAANPENP----LGPLAQVADQQGKYLA 341
Query: 184 SLLNR 188
++
Sbjct: 342 KCFSK 346
>gi|336470054|gb|EGO58216.1| hypothetical protein NEUTE1DRAFT_122492 [Neurospora tetrasperma
FGSC 2508]
gi|350290254|gb|EGZ71468.1| FAD/NAD(P)-binding domain-containing protein [Neurospora
tetrasperma FGSC 2509]
Length = 577
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 166/321 (51%), Gaps = 54/321 (16%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEIL 63
G S+EE RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L
Sbjct: 267 GQSQEEIDRLLHMVVVGGGPTGVEFAGELQDFFEEDIKKLIPDIADRFRVTLIEALPNVL 326
Query: 64 SSFDDRLRHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGTE----VPYGLLVWS 114
SF +L Y + + + +V+ + + ++ DGT +PYGLLVW+
Sbjct: 327 PSFSKQLIEYTESTFKEEKIDIMTKTMVKRVTEKTVEAEISKPDGTREKITLPYGLLVWA 386
Query: 115 TGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVL 168
TG +VK L +P R G ++E+L V +D++AVGDC +GY +
Sbjct: 387 TGNAVRPVVKDLMERIPAQKDSRRGLAVNEYLVVQGTRDIWAVGDCAVAGYAPT------ 440
Query: 169 PALAQVAERQGKYLFSLLNRIGK-----------------AGGGRANSAKDMELGD---- 207
AQVA ++G +L L N + + A G A +K++E +
Sbjct: 441 ---AQVASQEGNFLAGLFNNMARTEVLEQRVRELSGSLNLAPGNAAEISKEIEEHERQLR 497
Query: 208 ------PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWR 261
PF Y H GS+A IG KA+ D+ + + L+ G L++L WRSAYL+ S R
Sbjct: 498 RIKDIKPFHYSHQGSLAYIGSEKAVADV--SWFNGNLASGGSLTFLFWRSAYLSMCFSTR 555
Query: 262 NRFYVAVNWATTFVFGRDISR 282
NR V +W + +FGRD+SR
Sbjct: 556 NRLLVINDWVKSKLFGRDVSR 576
>gi|85091656|ref|XP_959008.1| hypothetical protein NCU11397 [Neurospora crassa OR74A]
gi|28920404|gb|EAA29772.1| hypothetical protein NCU11397 [Neurospora crassa OR74A]
Length = 577
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 166/321 (51%), Gaps = 54/321 (16%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEIL 63
G S+EE RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L
Sbjct: 267 GQSQEEIDRLLHMVVVGGGPTGVEFAGELQDFFEEDIKKLIPDIADRFRVTLIEALPNVL 326
Query: 64 SSFDDRLRHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGTE----VPYGLLVWS 114
SF +L Y + + + +V+ + + ++ DGT +PYGLLVW+
Sbjct: 327 PSFSKQLIEYTESTFKEEKIDIMTKTMVKRVTEKTVEAEISKPDGTREKITLPYGLLVWA 386
Query: 115 TGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVL 168
TG +VK L +P R G ++E+L V +D++AVGDC +GY +
Sbjct: 387 TGNAVRPVVKDLMERIPAQKDSRRGLAVNEYLVVQGTRDIWAVGDCAVAGYAPT------ 440
Query: 169 PALAQVAERQGKYLFSLLNRIGK-----------------AGGGRANSAKDMELGD---- 207
AQVA ++G +L L N + + A G A +K++E +
Sbjct: 441 ---AQVASQEGNFLAGLFNNMARTEVLEQRVRELSGSLNLAPGNAAEISKEIEEHERQLR 497
Query: 208 ------PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWR 261
PF Y H GS+A IG KA+ D+ + + L+ G L++L WRSAYL+ S R
Sbjct: 498 RIKDIKPFHYSHQGSLAYIGSEKAVADV--SWFNGNLASGGSLTFLFWRSAYLSMCFSTR 555
Query: 262 NRFYVAVNWATTFVFGRDISR 282
NR V +W + +FGRD+SR
Sbjct: 556 NRLLVINDWVKSKLFGRDVSR 576
>gi|452986422|gb|EME86178.1| hypothetical protein MYCFIDRAFT_88293 [Pseudocercospora fijiensis
CIRAD86]
Length = 527
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 165/319 (51%), Gaps = 52/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
S EE+ RLLH VVVGGGPTGVEF+GEL DF +D+++ ++D HVTL+EA +L
Sbjct: 217 SPEERKRLLHMVVVGGGPTGVEFAGELQDFFEQDLKKWIPEIQDNFHVTLVEALPSVLPM 276
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL--ILNDGT------EVPYGLLVWSTG 116
F L Y + + + + +VK+V + D + ++PYGLLVW+TG
Sbjct: 277 FSKSLIDYTEKTFKEETIEIRTKTMVKNVTPTYIEAEFTDSSGRKQLEKIPYGLLVWATG 336
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
LVK L +P R G ++E+L V +V+AVGDC+ + + T A
Sbjct: 337 NAVRPLVKDLINQIPAQKDSRRGLAVNEYLVVKGTDNVWAVGDCA--VANYAPT-----A 389
Query: 173 QVAERQGKYLFSLLNRIGKA--------------GGGRANSAKDMELGD----------- 207
QVA ++G +L L N++ K G A+D G+
Sbjct: 390 QVASQEGAFLARLFNQMAKTEEIEGKLSALSEEQGKAPNQEARDKIFGEIKDLQKRLRRV 449
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG KA+ D+ + + L+ G L++L WRSAYL+ S RNR
Sbjct: 450 KQMGPFEYSHQGSLAYIGSEKAVADI--SWLTGNLASGGQLTYLFWRSAYLSMCFSTRNR 507
Query: 264 FYVAVNWATTFVFGRDISR 282
V ++W +++FGRD+SR
Sbjct: 508 VLVIMDWLKSYIFGRDVSR 526
>gi|449295148|gb|EMC91170.1| hypothetical protein BAUCODRAFT_80098 [Baudoinia compniacensis UAMH
10762]
Length = 504
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 158/311 (50%), Gaps = 53/311 (17%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L S E K +LL+ VVGGGPTG+E+S EL D + D+ + Y + +Y +T+ + A +
Sbjct: 217 LPTTSIEMKKQLLNFAVVGGGPTGIEWSAELHDLVKEDMAKLYPELVEYARITVYDVAPK 276
Query: 62 ILSSFDDRLRHYATTQLSKSGV---------RLVRGIVKDVDSQKLILNDGT-------- 104
+LS FD++L YA + G+ L RG +V ++K + DGT
Sbjct: 277 VLSMFDEKLSKYAMDTFKRQGINIQTSHHVEELRRGAPGNV-AEKPGVKDGTTIYTIKLK 335
Query: 105 ---EVPYGLLVWSTGVGPSTLV-KSLDLP---KSPGGRIGIDEWLRVPS-----VQDVFA 152
EV G+ VWSTG+ + V K+LD I ++ ++V + + D++A
Sbjct: 336 EEGEVGVGMCVWSTGLMMNPFVEKALDSKVKRHEKSHAILTNDRMQVKAPDESIIPDLYA 395
Query: 153 VGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYR 212
+GDC+ LE T P+ AQVA ++ +L LN++ G F Y+
Sbjct: 396 LGDCA-ILEGTS---YPSTAQVANQKAHWLAKRLNKMDLHRNG-------------FTYK 438
Query: 213 HLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWAT 272
LG MA +G + A++ + S ++G ++W +WR AYL + VSWRNR + WA
Sbjct: 439 DLGVMAYVGNWNAIL-----QASGAGDISGRVAWFIWRGAYLAKSVSWRNRILIPTYWAV 493
Query: 273 TFVFGRDISRI 283
+FGRDISR
Sbjct: 494 NAIFGRDISRF 504
>gi|342889602|gb|EGU88640.1| hypothetical protein FOXB_00889 [Fusarium oxysporum Fo5176]
Length = 577
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 167/322 (51%), Gaps = 56/322 (17%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEIL 63
G S+EE RL+H VVVGGGPTGVEF+GEL DF D+++ + VTLIEA +L
Sbjct: 267 GQSQEEIDRLMHMVVVGGGPTGVEFAGELRDFFEDDIKKLIPEISHRFKVTLIEALPNVL 326
Query: 64 SSFDDRLRHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGTE----VPYGLLVWS 114
SF +L Y L + + +V+ + +D + DGT+ +PYGLLVW+
Sbjct: 327 PSFSKQLIEYTENTLREENIDIKLKTMVKRVTEDFVEAECAGPDGTKQTLRIPYGLLVWA 386
Query: 115 TGVGPSTLVKSLDLPKSPGGR-----IGIDEWLRVPSVQDVFAVGDC--SGYLESTGKTV 167
TG +V+ L + K P + + ++E+L V +D++AVGDC +GY +
Sbjct: 387 TGNAVRPIVRDL-MSKVPAQKDSRRGLAVNEYLVVQGTRDIWAVGDCAVAGYAPT----- 440
Query: 168 LPALAQVAERQGKYLFSLLNRIGKAGGGRA-----NSAKDMELGD--------------- 207
AQVA ++G +L L N + K A +S+ +++ G+
Sbjct: 441 ----AQVASQEGSFLARLFNNMAKTDSQEARIKELSSSLNLKQGNSAEVAAEIESLEKQL 496
Query: 208 -------PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSW 260
PF Y H GS+A IG KA+ D+ + ++ G L++L WRSAYL+ S
Sbjct: 497 RRIKDVKPFRYSHQGSLAYIGSEKAVADVPWF--NGNIASGGGLTYLFWRSAYLSMCFST 554
Query: 261 RNRFYVAVNWATTFVFGRDISR 282
RNR VAV+W + FGRD+SR
Sbjct: 555 RNRVLVAVDWLKSKAFGRDVSR 576
>gi|302891871|ref|XP_003044817.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256725742|gb|EEU39104.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 577
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 166/323 (51%), Gaps = 54/323 (16%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
G S+EE RL+H VVVGGGPTGVEF+GEL DF D+++ + VTLIEA
Sbjct: 265 FKGQSQEEIDRLMHMVVVGGGPTGVEFAGELRDFFEDDIKKLIPEISHRFKVTLIEALPN 324
Query: 62 ILSSFDDRLRHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGTE----VPYGLLV 112
+L SF +L Y L + + +V+ + ++ + + DG + +PYGLLV
Sbjct: 325 VLPSFSKQLIEYTENTLREENIDIKLKTMVKRVTEEFVEAECVGPDGKKQTLRIPYGLLV 384
Query: 113 WSTGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKT 166
W+TG +V+ L +P R G ++E+L V +D++AVGDC +GY +
Sbjct: 385 WATGNAVRPIVRDLMGKVPAQKESRRGLAVNEYLVVQGTRDIWAVGDCAVAGYAPT---- 440
Query: 167 VLPALAQVAERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD-- 207
AQVA ++G +L L N + K G A +A+++E +
Sbjct: 441 -----AQVASQEGSFLARLFNNMAKTESHESRIKELSSSLNLKQGNSAETAQEIETLEKQ 495
Query: 208 --------PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVS 259
PF Y H GS+A IG KA+ D+ + ++ G L++L WRSAYL+ S
Sbjct: 496 LRRIKDVKPFRYSHQGSLAYIGSEKAVADVPWF--NGNIASGGSLTYLFWRSAYLSMCFS 553
Query: 260 WRNRFYVAVNWATTFVFGRDISR 282
RNR VAV+W + FGRD+SR
Sbjct: 554 TRNRVLVAVDWLKSKAFGRDVSR 576
>gi|367003587|ref|XP_003686527.1| hypothetical protein TPHA_0G02580 [Tetrapisispora phaffii CBS 4417]
gi|357524828|emb|CCE64093.1| hypothetical protein TPHA_0G02580 [Tetrapisispora phaffii CBS 4417]
Length = 546
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 159/301 (52%), Gaps = 35/301 (11%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS 65
S+ E+ RLL +VVGGGPTGVEF+ EL DF+ +D+ + + I VTL+EA+ IL
Sbjct: 254 SDPERKRLLSFIVVGGGPTGVEFAAELQDFVDQDLSKWMPTISKEIKVTLVEASPNILGM 313
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG---TEVPYGLLVWSTGVGPS- 120
FD L Y K + + ++ VK+V + G E PYG+LVW+TG P
Sbjct: 314 FDKSLIQYTNDLFKKEKIEVKLKTAVKEVKETTVTTKCGDVVEETPYGILVWATGNAPRD 373
Query: 121 ---TLVKSLDLPKSPGGRIGIDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPALAQVAE 176
L+ L+ S G + ID+ LR+ ++++GDC+ + + P AQVA
Sbjct: 374 VSLKLMSKLEEQNSRRGLL-IDDKLRLLGGNGSIYSIGDCTFH-----AGLFPT-AQVAF 426
Query: 177 RQGKYLFSLLNRIGK--------AGGGRANSAKDMELG--------DPFVYRHLGSMATI 220
++G YL + N+I K + +S + ++ D F Y HLG++A I
Sbjct: 427 QEGVYLGEVFNKIHKIDQLKWELSNTQDKSSQEKIQAKIDIMNSKIDDFKYHHLGALAYI 486
Query: 221 GRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
G KA+ D+ ES+ +L+G ++L WR AYL+ +S RN+ VA++W +FGR+
Sbjct: 487 GSEKAIADIAMG-ESR-YNLSGSFTFLFWRYAYLSMCISARNKVLVALDWIKVSIFGRNS 544
Query: 281 S 281
S
Sbjct: 545 S 545
>gi|384106283|ref|ZP_10007190.1| NADH dehydrogenase [Rhodococcus imtechensis RKJ300]
gi|383833619|gb|EID73069.1| NADH dehydrogenase [Rhodococcus imtechensis RKJ300]
Length = 460
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 148/280 (52%), Gaps = 34/280 (12%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK--DYIHVTLIEANEILSSF 66
EE++RLL VVVG GPTGVE +G++++ R + Y ++ D V L A+ +L F
Sbjct: 161 EERARLLTFVVVGAGPTGVEMAGQIAELAHRTLLGAYRNIDTCDAQIVLLDAASAVLPPF 220
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDG----TEVPYGLLVWSTGVGPST 121
DRL A +L K GV + G V DVD+ + + DG + VWS GV S
Sbjct: 221 GDRLGSAAAKRLEKIGVEVRLGAAVTDVDADGVTIKDGRGETVRIESACKVWSAGVEASP 280
Query: 122 LVKSL------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
L + L +L ++ GRI + E L VP ++VF +GD + LP +AQVA
Sbjct: 281 LARQLAEQSGAELDRA--GRIAVREDLTVPGHREVFVIGDM------MARDRLPGVAQVA 332
Query: 176 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 235
+ G+Y +I GGRA S + PF YR GSMATI R+ A+V +
Sbjct: 333 IQGGRYA---ARQIAADAGGRATSPDRV----PFRYRDKGSMATISRFNAVVKV------ 379
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
G+ LAGFL+W++W + ++ VV +R+R ++W TF+
Sbjct: 380 GGIELAGFLAWILWLAVHVVYVVGFRSRLSTLMSWTWTFL 419
>gi|344233947|gb|EGV65817.1| FAD/NAD(P)-binding domain-containing protein [Candida tenuis ATCC
10573]
Length = 542
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 156/308 (50%), Gaps = 41/308 (13%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ ++ RLL VV GGGPTGVE +GEL D+I +D+++ V + VTL+EA +L+ F
Sbjct: 242 DADRKRLLSIVVCGGGPTGVEVAGELQDYIDQDLKKWIPEVASEVKVTLVEALPNVLNMF 301
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN-----DGT----EVPYGLLVWSTG 116
+ +L Y + + L +VK V + +I DG+ E+PYGLL+W+TG
Sbjct: 302 NKKLVDYTKQVFQDTNIDLKTNTMVKQVTDKNVIAQVKSPKDGSTEIVEIPYGLLIWATG 361
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
P + + L + + R G +++ L V ++FA+GDC+ T A
Sbjct: 362 NAPRPITRDLTSKIEEQKNARRGLLVNDKLLVDGTDNIFALGDCTF-------TKFAPTA 414
Query: 173 QVAERQGKYL---FSLLNRIGKAGGGRAN---------------SAKDMELGDPFVYRHL 214
QVA ++G +L F L+ I N SAK E F Y H
Sbjct: 415 QVAFQEGIFLGSHFKKLHEIESLDFQVKNAKDLDSVQIERLSKKSAKLKEKLPIFKYNHQ 474
Query: 215 GSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
GS+A IG +A+ DL S ++ G +++L WRSAY+ +S RN+F V ++W
Sbjct: 475 GSLAYIGSERAVADLVWGDWS-NVTTGGTITYLFWRSAYIYMCLSVRNQFLVCLDWMKVS 533
Query: 275 VFGRDISR 282
+FGRDISR
Sbjct: 534 LFGRDISR 541
>gi|156844626|ref|XP_001645375.1| hypothetical protein Kpol_1058p54 [Vanderwaltozyma polyspora DSM
70294]
gi|156116036|gb|EDO17517.1| hypothetical protein Kpol_1058p54 [Vanderwaltozyma polyspora DSM
70294]
Length = 546
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/305 (34%), Positives = 164/305 (53%), Gaps = 43/305 (14%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS 65
++ E+ +LL+ +VVGGGPTGVEF+ EL D+I +D+ + + I V L+EA IL S
Sbjct: 254 NDPERQKLLNFIVVGGGPTGVEFAAELKDYIDQDLSKWMPQISKEIKVILVEATPNILGS 313
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLIL---NDGTEVPYGLLVWSTGVGP-- 119
F+ L YA + + L ++ VK VD + +D ++PYG+LVW+TG P
Sbjct: 314 FEPSLIQYAKDLFKRERIHLKLKTAVKGVDDDYVTTKCGDDVEKIPYGVLVWATGNAPRE 373
Query: 120 --STLVKSLDLPKSPGGRIGIDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPAL---AQ 173
L++ LD S G + I+E L++ D +FAVGDC T P L AQ
Sbjct: 374 VSKKLMEKLDEQDSRRGLL-INEKLQLLGGNDSIFAVGDC---------TFHPGLFPTAQ 423
Query: 174 VAERQGKYLFSLLNRIGK-------AGGGRANSAKD----------MELGDPFVYRHLGS 216
VA ++ YL + N++ K A + S+K ++G+ F Y H+G+
Sbjct: 424 VAHQESLYLGEVFNKLYKIDQLKWEASQTKDTSSKQKLESRAQVLAAKIGN-FKYNHMGA 482
Query: 217 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 276
+A IG KA+ DL ESK S++G ++L W+ AYL+ +S+RN+ VA++W +
Sbjct: 483 LAYIGSEKAVADLAIG-ESK-YSMSGSFTFLFWKYAYLSMCLSFRNKVLVAMDWIKVSIL 540
Query: 277 GRDIS 281
GR+ S
Sbjct: 541 GRNSS 545
>gi|242806809|ref|XP_002484822.1| alternative NADH-dehydrogenase [Talaromyces stipitatus ATCC 10500]
gi|218715447|gb|EED14869.1| alternative NADH-dehydrogenase [Talaromyces stipitatus ATCC 10500]
Length = 572
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/319 (35%), Positives = 164/319 (51%), Gaps = 52/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+EEE RLLH VVVGGGPTGVEF+GEL DF D+R+ ++D HVTL+EA IL
Sbjct: 262 TEEEVKRLLHMVVVGGGPTGVEFAGELQDFFEEDLRKWIPGIQDNFHVTLVEALPNILPM 321
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGT----EVPYGLLVWSTG 116
F +L Y + + + + + +VK V + ++ DG+ ++PYGLLVW+TG
Sbjct: 322 FSKQLIEYTESSFKEEKITIRTKTMVKKVTDKYIEAEITKPDGSKELEKIPYGLLVWATG 381
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+VK L + R G ++E+L V ++++AVGDC+ T A
Sbjct: 382 NAVRPVVKDLMGQISAQQNSRRGLAVNEYLVVNGTENIWAVGDCA-------ITNYAPTA 434
Query: 173 QVAERQGKYLFSLLNRIGKAGGGR---------ANSAKDMELGD---------------- 207
QVA ++G +L L N + K AKD E +
Sbjct: 435 QVASQEGAFLARLFNTMAKTESLEEELKRLSVAQQEAKDEESRNKIFDEIKERQRQLRRT 494
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ V S RNR
Sbjct: 495 KQIGPFQYSHQGSLAYIGKERAVADI--SWVSGNIASGGTMTYLFWRSAYLSMVFSARNR 552
Query: 264 FYVAVNWATTFVFGRDISR 282
VA +W VFGRD+SR
Sbjct: 553 ILVATDWIKAKVFGRDVSR 571
>gi|344209046|ref|YP_004794187.1| NADH dehydrogenase (ubiquinone) [Stenotrophomonas maltophilia JV3]
gi|343780408|gb|AEM52961.1| NADH dehydrogenase (ubiquinone) [Stenotrophomonas maltophilia JV3]
Length = 426
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 145/270 (53%), Gaps = 25/270 (9%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFD 67
+K+ L VVGGGPTGVE +G L++ +R + H+ V L+EA +LSSF
Sbjct: 155 KKAAWLSFAVVGGGPTGVELAGTLAEIARHTLRNEFRHIDPASAKVRLVEAGPRVLSSFP 214
Query: 68 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
+ L A QL K GV ++ G V D+DSQ L + VP +VW+ GV S L ++L
Sbjct: 215 EVLSLKARRQLEKLGVEVLTGTPVSDIDSQGFKLGE-QFVPARTVVWAAGVAASPLARTL 273
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
D+P GR+ + L +P ++F GD + ++ GK V P +A A++ GKY+ ++
Sbjct: 274 DVPLDRAGRVQVQPDLTLPDHPELFVAGDLAALNQANGKPV-PGVAPAAKQMGKYVAEVI 332
Query: 187 N-RI-GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
R+ GKA G PF Y G++ATIGR A+V L + L L+G L
Sbjct: 333 RARLHGKAAPG------------PFKYADYGNLATIGRMAAIVHLGR------LQLSGIL 374
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
+W W +A++ ++ +RNR V +NWA +
Sbjct: 375 AWWFWLAAHVFFLIGFRNRIVVLLNWAVAY 404
>gi|448124470|ref|XP_004204928.1| Piso0_000215 [Millerozyma farinosa CBS 7064]
gi|358249561|emb|CCE72627.1| Piso0_000215 [Millerozyma farinosa CBS 7064]
Length = 584
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 159/306 (51%), Gaps = 39/306 (12%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E+ RLL +V GGGPTGVE +GEL D+I +D+++ V + VTL+EA +L+SF
Sbjct: 286 DSERKRLLSIIVCGGGPTGVEVAGELQDYIDQDLKKWIPEVASELKVTLVEALPNVLNSF 345
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN-----DGT----EVPYGLLVWSTG 116
+ +L Y + + L V ++K V + +I + DG+ E+PYG+LVW+TG
Sbjct: 346 NKKLVDYTHQVFQDTNIDLRVNTMIKKVSDKTVIASTKSPKDGSTETVEIPYGMLVWATG 405
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
P L++ L + + R G ++E L V +++A+GDC+ T P A
Sbjct: 406 NAPRGLIRQLSSSIEEQKNARRGLLVNERLLVDGTDNIYALGDCTF-------TKYPPTA 458
Query: 173 QVAERQGKYLFSLLNRIGKAGGGRAN----SAKD------------MELGDPFVYRHLGS 216
QVA +QG +L R+ + + + S KD E F Y + GS
Sbjct: 459 QVAFQQGAFLGEHFTRLHEVESIKYSIDHPSPKDNVERLQKKLTKLQEKMPVFKYNYKGS 518
Query: 217 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 276
+A IG +A+ D+ S +S G L++L WRSAY+ +S +N+ V ++W +F
Sbjct: 519 LAYIGSERAVADMVWGDWS-NVSSGGTLTFLFWRSAYIYMCLSVKNQLLVCLDWIKVSMF 577
Query: 277 GRDISR 282
GRD S+
Sbjct: 578 GRDCSK 583
>gi|424854556|ref|ZP_18278914.1| NADH dehydrogenase [Rhodococcus opacus PD630]
gi|356664603|gb|EHI44696.1| NADH dehydrogenase [Rhodococcus opacus PD630]
Length = 471
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 145/278 (52%), Gaps = 30/278 (10%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSF 66
EE++RLL VVVG GPTGVE +G++++ R + Y ++ +D V L A+ +L F
Sbjct: 172 EERARLLTFVVVGAGPTGVETAGQIAELAHRTLVGAYRNIDTRDARIVLLDAASAVLPPF 231
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDG----TEVPYGLLVWSTGVGPST 121
DRL A +L K GV + G V DVD+ + + DG + VWS GV S
Sbjct: 232 GDRLGSAAAERLEKIGVEVRLGAAVTDVDADGVTIKDGRGETVRIESACKVWSAGVEASP 291
Query: 122 LVKSLDLPKSP----GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
L + L GRI + E L VP ++VF +GD + LP +AQVA +
Sbjct: 292 LARQLAEQSGAELDRAGRIAVREDLTVPGHREVFVIGDM------MARDRLPGVAQVAIQ 345
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
G+Y +I GGRA S + PF YR GSMATI R+ A+V + G
Sbjct: 346 GGRYA---ARQISADAGGRATSPDRV----PFRYRDKGSMATISRFNAVVKV------GG 392
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+ LAGFL+W++W + ++ VV +R+R ++W TF+
Sbjct: 393 IELAGFLAWILWLAVHVVYVVGFRSRLSTLMSWTWTFL 430
>gi|448122124|ref|XP_004204373.1| Piso0_000215 [Millerozyma farinosa CBS 7064]
gi|358349912|emb|CCE73191.1| Piso0_000215 [Millerozyma farinosa CBS 7064]
Length = 584
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 160/306 (52%), Gaps = 39/306 (12%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E+ RLL +V GGGPTGVE +GEL D+I +D+++ V + VTL+EA +L+SF
Sbjct: 286 DSERKRLLSIIVCGGGPTGVEVAGELQDYIDQDLKKWIPEVASELKVTLVEALPNVLNSF 345
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN-----DGT----EVPYGLLVWSTG 116
+ +L Y + + + L V ++K V + +I + DG+ E+PYG+LVW+TG
Sbjct: 346 NKKLVDYTSQVFQDTNIDLRVNTMIKKVSDKTVIASTKSPKDGSTESVEIPYGMLVWATG 405
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
P L++ L + + R G ++E L V +++A+GDC+ T P A
Sbjct: 406 NAPRGLIRQLSSSIEEQKNARRGLLVNERLLVDGTDNIYALGDCTF-------TKYPPTA 458
Query: 173 QVAERQGKYLFSLLNRIGKAGGGRAN----SAKD------------MELGDPFVYRHLGS 216
QVA +QG +L R+ + + + S KD E F Y + GS
Sbjct: 459 QVAFQQGAFLGEHFTRLHEVESIKYSIDHPSPKDNVERLQKKFTKLQEKMPVFKYYYKGS 518
Query: 217 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 276
+A IG +A+ D+ S +S G L++L WRSAY+ +S +N+ V ++W +F
Sbjct: 519 LAYIGSERAVADMVWGGWS-NVSSGGTLTFLFWRSAYIYMCLSVKNQLLVCLDWIKVSMF 577
Query: 277 GRDISR 282
GRD S+
Sbjct: 578 GRDCSK 583
>gi|346976033|gb|EGY19485.1| external NADH-ubiquinone oxidoreductase [Verticillium dahliae
VdLs.17]
Length = 564
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 166/321 (51%), Gaps = 54/321 (16%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEIL 63
G + EE RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L
Sbjct: 254 GQTNEEIDRLLHMVVVGGGPTGVEFAGELQDFFEDDIKRLVPDIADRFKVTLIEALPNVL 313
Query: 64 SSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKL----ILNDGTE----VPYGLLVWS 114
SF +L Y + + L + +VK+V + DG++ +PYGLLVW+
Sbjct: 314 PSFSKQLIEYTENTFKEEKIDILTKTMVKNVTDTTVEAVGTNPDGSKKTIVIPYGLLVWA 373
Query: 115 TGVGPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDC--SGYLESTGKTVL 168
TG ++K L +P R + ++E+L V +D++A+GDC +GY +
Sbjct: 374 TGNAVRPIIKELISKIPAQKDSRRGLAVNEYLVVQGTRDIWAIGDCAVAGYAPT------ 427
Query: 169 PALAQVAERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD---- 207
AQVA ++G +L L N + K G A +A+++E +
Sbjct: 428 ---AQVAGQEGSFLARLFNNMAKTEELESKVRELSSNLNVKPGNSAEAAREIEACERQLR 484
Query: 208 ------PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWR 261
PF Y H GS+A IG KA+ D+ + + ++ G L++L WRSAYL+ S R
Sbjct: 485 RIKDVKPFHYTHQGSLAYIGSEKAVADV--SWWNGNIASGGSLTFLFWRSAYLSMCFSTR 542
Query: 262 NRFYVAVNWATTFVFGRDISR 282
NR V ++W + FGRD+SR
Sbjct: 543 NRLLVIIDWLKSKAFGRDVSR 563
>gi|407916311|gb|EKG09685.1| hypothetical protein MPH_13207 [Macrophomina phaseolina MS6]
Length = 548
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 163/342 (47%), Gaps = 83/342 (24%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L S+E + LL+ ++GGGPTG+EFS EL D I D+ Q Y + + +T+ + A +
Sbjct: 229 LPTTSDEMRRNLLNFAIIGGGPTGIEFSAELHDIIREDLAQLYPDLMKFYRITVYDVAPK 288
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-----VRGIVKDVDSQK--------------LILND 102
+LS FD+ L YA T + G+ + V + + V S + L + +
Sbjct: 289 VLSMFDENLSKYAMTTFKREGIDIKTSHHVEELREGVPSHQKSSPGVKEPRSCWTLKIKE 348
Query: 103 GTEVPYGLLVWSTGVGPSTLV-----KSLDLPK----------------------SPGGR 135
EV G++VWSTG+ + V K LPK G
Sbjct: 349 EGEVGVGMVVWSTGLMMNPFVDQALRKVQPLPKREISLEGQDGQKLEDAWLVKKHPKTGA 408
Query: 136 IGIDEWLRV---PS-----------VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 181
I + LRV P ++DV+A+GDC G +E T PA AQVA ++ +
Sbjct: 409 IITNNQLRVILEPEGQDEDGKSRAIMEDVYALGDC-GTIEGTN---YPATAQVANQKAVW 464
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
L LNR D+E G F ++++G MA IG + A++ + G +++
Sbjct: 465 LAKRLNR------------GDIE-GQSFTWKNMGVMAYIGNWNAIM-----QSGGGGNIS 506
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G +WL+WR AYLT+ VSWRN+ + V W +VFGRD+SR
Sbjct: 507 GRAAWLIWRGAYLTKAVSWRNKVLIPVYWFINWVFGRDVSRF 548
>gi|320031207|gb|EFW13189.1| hypothetical protein CPSG_10212 [Coccidioides posadasii str.
Silveira]
Length = 579
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/319 (35%), Positives = 167/319 (52%), Gaps = 52/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+ EE RLLH VVVGGGPTGVEF+GEL DF D+++ +KD HVTL+EA +L
Sbjct: 269 TPEEVKRLLHMVVVGGGPTGVEFAGELQDFFNEDLKKWIPDIKDNFHVTLVEALPNVLPM 328
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL---ILN-DGT----EVPYGLLVWSTG 116
F +L Y + + + + + +VK+V + + + N DG+ ++PYGLLVW+TG
Sbjct: 329 FSKQLIDYTESTFKEEAITIRTKTMVKNVTDKYIEAEVTNPDGSKEMEKIPYGLLVWATG 388
Query: 117 VGPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+VK L +P R + ++E+L V ++++AVGDC+ T A
Sbjct: 389 NAVRPVVKDLMSQIPAQKNSRRGLAVNEYLVVNGTENIWAVGDCA-------ITNYAPTA 441
Query: 173 QVAERQGKYLFSLLNRIGKAGGGRAN---------SAKDMELGD---------------- 207
QVA ++G +L L N + K + AKD E +
Sbjct: 442 QVASQEGAFLARLFNTMAKTEAIEKDLKKLSVAQYEAKDDEKRNQLLDEIRALQKQLRRT 501
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG+ +A+ D+ + S ++ G L++L WRSAYL+ S RNR
Sbjct: 502 KQIGPFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTLTYLFWRSAYLSMCFSTRNR 559
Query: 264 FYVAVNWATTFVFGRDISR 282
VA++W +FGRD+SR
Sbjct: 560 VLVALDWVKARLFGRDVSR 578
>gi|303314061|ref|XP_003067039.1| external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor,
putative [Coccidioides posadasii C735 delta SOWgp]
gi|240106707|gb|EER24894.1| external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor,
putative [Coccidioides posadasii C735 delta SOWgp]
Length = 579
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/319 (35%), Positives = 167/319 (52%), Gaps = 52/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+ EE RLLH VVVGGGPTGVEF+GEL DF D+++ +KD HVTL+EA +L
Sbjct: 269 TPEEVKRLLHMVVVGGGPTGVEFAGELQDFFNEDLKKWIPDIKDNFHVTLVEALPNVLPM 328
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL---ILN-DGT----EVPYGLLVWSTG 116
F +L Y + + + + + +VK+V + + + N DG+ ++PYGLLVW+TG
Sbjct: 329 FSKQLIDYTESTFKEEAITIRTKTMVKNVTDKYIEAEVTNPDGSKEIEKIPYGLLVWATG 388
Query: 117 VGPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+VK L +P R + ++E+L V ++++AVGDC+ T A
Sbjct: 389 NAVRPVVKDLMSQIPAQKNSRRGLAVNEYLVVNGTENIWAVGDCA-------ITNYAPTA 441
Query: 173 QVAERQGKYLFSLLNRIGKAGGGRAN---------SAKDMELGD---------------- 207
QVA ++G +L L N + K + AKD E +
Sbjct: 442 QVASQEGAFLARLFNTMAKTEAIEKDLKKLSVAQYEAKDDEKRNQLLDEIRALQKQLRRT 501
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG+ +A+ D+ + S ++ G L++L WRSAYL+ S RNR
Sbjct: 502 KQIGPFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTLTYLFWRSAYLSMCFSTRNR 559
Query: 264 FYVAVNWATTFVFGRDISR 282
VA++W +FGRD+SR
Sbjct: 560 VLVALDWVKARLFGRDVSR 578
>gi|380094173|emb|CCC08390.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 578
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 168/321 (52%), Gaps = 54/321 (16%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEIL 63
G S+EE RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L
Sbjct: 268 GQSQEEIDRLLHMVVVGGGPTGVEFAGELQDFFEEDIKKLIPDIADRFRVTLIEALPNVL 327
Query: 64 SSFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQ----KLILNDGTE----VPYGLLVWS 114
SF +L Y + + + ++ + +VK V + ++ DGT +PYGLLVW+
Sbjct: 328 PSFSKQLIEYTESTFKEEKIDIMTKTMVKKVTDKTVEAEISKPDGTREKITLPYGLLVWA 387
Query: 115 TGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVL 168
TG +VK L +P R G ++E+L V +D++AVGDC +GY +
Sbjct: 388 TGNAVRPVVKDLMERIPAQKDSRRGLAVNEYLVVQGTRDIWAVGDCAVAGYAPT------ 441
Query: 169 PALAQVAERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD---- 207
AQVA ++G +L L N + + G A +K++E +
Sbjct: 442 ---AQVASQEGNFLAGLFNNMARTEVLEQRVRELSGSLNLQPGNAAEISKEIEEHERQLR 498
Query: 208 ------PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWR 261
PF Y H GS+A IG KA+ D+ + + L+ G L++L WRSAYL+ S R
Sbjct: 499 RIKDIKPFHYSHQGSLAYIGSEKAVADV--SWFNGNLASGGSLTFLFWRSAYLSMCFSTR 556
Query: 262 NRFYVAVNWATTFVFGRDISR 282
NR V +W + +FGRD+SR
Sbjct: 557 NRLLVINDWVKSKLFGRDVSR 577
>gi|340520140|gb|EGR50377.1| predicted protein [Trichoderma reesei QM6a]
Length = 578
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 166/321 (51%), Gaps = 54/321 (16%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEIL 63
G + EE RL+H VVVGGGPTGVEF+GEL DF D+++ + + VTLIEA +L
Sbjct: 268 GQTPEEIDRLMHMVVVGGGPTGVEFAGELQDFFEEDIKKLVPDISPHFKVTLIEALPNVL 327
Query: 64 SSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGT----EVPYGLLVWS 114
F L Y L + + + + +VK V + + DG+ E+PYGLLVW+
Sbjct: 328 PMFSKTLIDYTENTLREEKIDIKTKTMVKKVTDKTVEAEVSRPDGSKERVEIPYGLLVWA 387
Query: 115 TGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVL 168
TG +VK L +P R G ++E+L V +D++A+GDC +GY +
Sbjct: 388 TGNAVRPIVKDLASKIPAQKDSRRGLAVNEYLVVQGTRDIWAIGDCAVAGYAPT------ 441
Query: 169 PALAQVAERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD---- 207
AQVA ++G +L L N + K G A +A+++EL +
Sbjct: 442 ---AQVASQEGSFLGKLFNNMAKTESYEQRIQELSSKMNIETGNSAEAAQEIELLERQLK 498
Query: 208 ------PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWR 261
PF Y H GS+A IG KA+ D+ + + L+ G L++L WRSAYL+ S R
Sbjct: 499 KIRDVKPFRYSHQGSLAYIGSEKAVADV--SWWNGNLATGGSLTYLFWRSAYLSMCFSTR 556
Query: 262 NRFYVAVNWATTFVFGRDISR 282
NR V ++W + FGRD+SR
Sbjct: 557 NRVLVLLDWLKSKAFGRDVSR 577
>gi|329766038|ref|ZP_08257599.1| NADH dehydrogenase, FAD-containing subunit [Candidatus
Nitrosoarchaeum limnia SFB1]
gi|329137493|gb|EGG41768.1| NADH dehydrogenase, FAD-containing subunit [Candidatus
Nitrosoarchaeum limnia SFB1]
Length = 400
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 151/281 (53%), Gaps = 21/281 (7%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILS 64
S E + + L VVG G GVE GE++ F+ + V+Q Y + ++ I++ LI + NEIL
Sbjct: 109 SVELQQKFLTFTVVGAGFAGVEIIGEINHFVRKSVKQAYPTINENNINMILISSKNEILP 168
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPSTL 122
+ +L A + L K GVR++ VK +D+ + L+DG +P L+W+ GV +++
Sbjct: 169 ELNYKLGESARSYLKKMGVRIISN-VKAIDAGESHVELSDGEIIPCTTLIWTGGVTTNSM 227
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
+KSL GG++ +D++LR+ +VFA+GDC+ L++ P AQ A R+ +
Sbjct: 228 IKSLICEHDKGGKVLVDKFLRLKDHPEVFALGDCAAILDTDTGKFYPPTAQHALRESTVV 287
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
A + + D L + F Y+ G MATIG + L GLS+ G
Sbjct: 288 ---------AQNIKKSLESDSNLKE-FSYQSKGMMATIGNKAGVASLM------GLSITG 331
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L+W++WR+ YL+ + ++ ++ + + WA FG D++ I
Sbjct: 332 VLAWVIWRTYYLSHLPTFESKVKIGIGWAINSFFGTDLTLI 372
>gi|194367376|ref|YP_002029986.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Stenotrophomonas maltophilia R551-3]
gi|194350180|gb|ACF53303.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Stenotrophomonas maltophilia R551-3]
Length = 426
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 142/268 (52%), Gaps = 21/268 (7%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFD 67
+K+ L VVGGGPTGVE +G L++ +R + H+ V L+EA +LSSF
Sbjct: 155 KKAAWLSFAVVGGGPTGVELAGTLAEIARHTLRNEFRHIDPASAKVRLVEAGPRVLSSFP 214
Query: 68 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
+ L A QL K GV ++ G V D+DSQ L D VP +VW+ GV S L ++L
Sbjct: 215 EVLSLKARRQLEKLGVEVLTGTPVSDIDSQGFKLGD-QFVPARTVVWAAGVAASPLARTL 273
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
D+P GR+ + L +P ++F GD + ++ GK V P +A A++ GKY+ ++
Sbjct: 274 DVPLDRAGRVQVQPDLTLPDHPELFVAGDLAALNQANGKPV-PGVAPAAKQMGKYVAEVI 332
Query: 187 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
RA G PF Y G++ATIGR A+V L + L L+G L+W
Sbjct: 333 ---------RARLHNKPAPG-PFKYADFGNLATIGRMAAIVHLGR------LQLSGVLAW 376
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTF 274
W +A++ ++ +RNR V +NWA +
Sbjct: 377 WFWLAAHVFFLIGFRNRVVVLLNWAVAY 404
>gi|336268298|ref|XP_003348914.1| hypothetical protein SMAC_01935 [Sordaria macrospora k-hell]
Length = 554
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 168/321 (52%), Gaps = 54/321 (16%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEIL 63
G S+EE RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L
Sbjct: 244 GQSQEEIDRLLHMVVVGGGPTGVEFAGELQDFFEEDIKKLIPDIADRFRVTLIEALPNVL 303
Query: 64 SSFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQ----KLILNDGTE----VPYGLLVWS 114
SF +L Y + + + ++ + +VK V + ++ DGT +PYGLLVW+
Sbjct: 304 PSFSKQLIEYTESTFKEEKIDIMTKTMVKKVTDKTVEAEISKPDGTREKITLPYGLLVWA 363
Query: 115 TGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVL 168
TG +VK L +P R G ++E+L V +D++AVGDC +GY +
Sbjct: 364 TGNAVRPVVKDLMERIPAQKDSRRGLAVNEYLVVQGTRDIWAVGDCAVAGYAPT------ 417
Query: 169 PALAQVAERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD---- 207
AQVA ++G +L L N + + G A +K++E +
Sbjct: 418 ---AQVASQEGNFLAGLFNNMARTEVLEQRVRELSGSLNLQPGNAAEISKEIEEHERQLR 474
Query: 208 ------PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWR 261
PF Y H GS+A IG KA+ D+ + + L+ G L++L WRSAYL+ S R
Sbjct: 475 RIKDIKPFHYSHQGSLAYIGSEKAVADV--SWFNGNLASGGSLTFLFWRSAYLSMCFSTR 532
Query: 262 NRFYVAVNWATTFVFGRDISR 282
NR V +W + +FGRD+SR
Sbjct: 533 NRLLVINDWVKSKLFGRDVSR 553
>gi|119495020|ref|XP_001264306.1| pyridine nucleotide-disulphide oxidoreductase, putative
[Neosartorya fischeri NRRL 181]
gi|119412468|gb|EAW22409.1| pyridine nucleotide-disulphide oxidoreductase, putative
[Neosartorya fischeri NRRL 181]
Length = 545
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 160/337 (47%), Gaps = 73/337 (21%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L + E + LLH +VG GPTG E + L DFI RD+ Q Y + +TL + A
Sbjct: 224 LPTTAPEMRKWLLHFAIVGAGPTGTELAASLRDFIYRDLMQLYPSLAGIPRITLYDVAPT 283
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-----VRGI---------VKDVDSQK---LILNDGT 104
+LS FD+RL YA + K G+ + V G+ ++D ++ L +
Sbjct: 284 VLSMFDERLAAYAMETMKKEGITIKTSHHVAGLRWGPPGATPPYEMDPKRCLTLTTKEEG 343
Query: 105 EVPYGLLVWSTG---------------VGPST--LVK---------SLDLPKSPGGRIGI 138
EV G+ VW+TG V PS L K S + K P G + +
Sbjct: 344 EVGVGMCVWATGNKMNEFVRNSLEEVDVFPSASALAKGEKIKEENASWKVKKGPNGALLV 403
Query: 139 DEWLRV---------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 189
D LRV ++DVFA+GD + + TG PA AQ ++ K+L + LN
Sbjct: 404 DGRLRVQLASDNGETAILRDVFALGDNA--MPETGAP--PATAQATFQEAKWLAARLN-- 457
Query: 190 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN--KESKGLS--LAGFLS 245
A D+E PF +R++G++A IG +AL+ L + K L L G ++
Sbjct: 458 ----------ADDIEQAPPFSFRNMGTLAYIGDARALMQLPHEDGRRYKYLPHGLTGRMA 507
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
WLVW SAYLT +SWRNR VA W +FGRD+SR
Sbjct: 508 WLVWNSAYLTMSISWRNRLRVAFRWLLNNLFGRDVSR 544
>gi|67517831|ref|XP_658698.1| hypothetical protein AN1094.2 [Aspergillus nidulans FGSC A4]
gi|40747056|gb|EAA66212.1| hypothetical protein AN1094.2 [Aspergillus nidulans FGSC A4]
gi|259488595|tpe|CBF88157.1| TPA: NADH dehydrogenase (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 570
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/319 (35%), Positives = 166/319 (52%), Gaps = 52/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
SEEE RLLH VVVGGGPTGVEF+GEL DF D+R+ +++ VTL+EA +L
Sbjct: 260 SEEEIKRLLHMVVVGGGPTGVEFAGELQDFFEHDLRKWVPEIQENFRVTLVEALPNVLPM 319
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTG 116
F +L Y + + + + + +VK+V + ++ DGT+ +PYGLLVW+TG
Sbjct: 320 FSKQLIDYTESTFKEESITIRTKTMVKNVTDKYIEAEVTKPDGTKELETIPYGLLVWATG 379
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L LP R G ++E+L V ++V+AVGDC+ T A
Sbjct: 380 NAIRPIVRDLMSQLPAQKNSRRGLAVNEYLVVNGTENVWAVGDCA-------ITNYAPTA 432
Query: 173 QVAERQGKYLFSLLNRIGKAGG--------GRANSAKDME---------LGD-------- 207
QVA ++G +L L N + K A SA E + D
Sbjct: 433 QVASQEGAFLARLFNTMAKTEAIEKELQRLSEAQSAAKSEEERNKIFDEIRDHQRQLRRT 492
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ S RNR
Sbjct: 493 KQIGPFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTMTYLFWRSAYLSMCFSTRNR 550
Query: 264 FYVAVNWATTFVFGRDISR 282
VA++W +FGRD+SR
Sbjct: 551 VLVALDWVKAKLFGRDVSR 569
>gi|46116576|ref|XP_384306.1| hypothetical protein FG04130.1 [Gibberella zeae PH-1]
Length = 575
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 165/321 (51%), Gaps = 54/321 (16%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEIL 63
G S+EE RL+H VVVGGGPTGVEF+GEL DF D+++ + VTLIEA +L
Sbjct: 265 GQSQEEIDRLMHMVVVGGGPTGVEFAGELRDFFEEDIKKLIPDISHRFKVTLIEALPNVL 324
Query: 64 SSFDDRLRHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGTE----VPYGLLVWS 114
SF +L Y + + + +V+ + +D + DG++ +PYGLLVW+
Sbjct: 325 PSFSKQLIEYTENTMREENIDIKLKTMVKKVTEDFVEAEFAGPDGSKQTLRIPYGLLVWA 384
Query: 115 TGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVL 168
TG +V+ L +P R G ++E+L V +D++AVGDC +GY +
Sbjct: 385 TGNAVRPIVRDLMGKVPAQKDSRRGLAVNEYLVVQGTRDIWAVGDCAVAGYAPT------ 438
Query: 169 PALAQVAERQGKYLFSLLNRIGKAG-----------------GGRANSAKDME------- 204
AQVA ++G +L L N + K G A A ++E
Sbjct: 439 ---AQVASQEGSFLARLFNNMAKTDTQEERIKELSSSLNLKQGNSAEIAAEIESLEKQLR 495
Query: 205 -LGD--PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWR 261
+ D PF Y H GS+A IG KA+ D+ + ++ G L++L WRSAYL+ S R
Sbjct: 496 RIKDVKPFRYSHQGSLAYIGSEKAVADVPWF--NGNIASGGGLTYLFWRSAYLSMCFSTR 553
Query: 262 NRFYVAVNWATTFVFGRDISR 282
NR VAV+W + FGRD+SR
Sbjct: 554 NRVLVAVDWLKSKAFGRDVSR 574
>gi|408400618|gb|EKJ79696.1| hypothetical protein FPSE_00150 [Fusarium pseudograminearum CS3096]
Length = 575
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 165/321 (51%), Gaps = 54/321 (16%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEIL 63
G S+EE RL+H VVVGGGPTGVEF+GEL DF D+++ + VTLIEA +L
Sbjct: 265 GQSQEEIDRLMHMVVVGGGPTGVEFAGELRDFFEEDIKKLIPDISHRFKVTLIEALPNVL 324
Query: 64 SSFDDRLRHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGTE----VPYGLLVWS 114
SF +L Y + + + +V+ + +D + DG++ +PYGLLVW+
Sbjct: 325 PSFSKQLIEYTENTMREENIDIKLKTMVKKVTEDFVEAEFAGPDGSKQTLRIPYGLLVWA 384
Query: 115 TGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVL 168
TG +V+ L +P R G ++E+L V +D++AVGDC +GY +
Sbjct: 385 TGNAVRPIVRDLMGKVPAQKDSRRGLAVNEYLVVQGTRDIWAVGDCAVAGYAPT------ 438
Query: 169 PALAQVAERQGKYLFSLLNRIGKAG-----------------GGRANSAKDME------- 204
AQVA ++G +L L N + K G A A ++E
Sbjct: 439 ---AQVASQEGSFLARLFNNMAKTDTQEERIKELSSSLNLKQGNSAEIAAEIESLEKQLR 495
Query: 205 -LGD--PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWR 261
+ D PF Y H GS+A IG KA+ D+ + ++ G L++L WRSAYL+ S R
Sbjct: 496 RIKDVKPFRYSHQGSLAYIGSEKAVADVPWF--NGNIASGGGLTYLFWRSAYLSMCFSTR 553
Query: 262 NRFYVAVNWATTFVFGRDISR 282
NR VAV+W + FGRD+SR
Sbjct: 554 NRVLVAVDWLKSKAFGRDVSR 574
>gi|443926222|gb|ELU44935.1| ndb1 (nad(p)h dehydrogenase b1) [Rhizoctonia solani AG-1 IA]
Length = 500
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 151/284 (53%), Gaps = 37/284 (13%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY------SHVKDYIHVTL 56
L S E+ +LLH +VGGG TGVEF+ EL D + D+ Y S V+++ +T+
Sbjct: 238 LPTTSPAERDKLLHFAIVGGGATGVEFAAELHDLLHDDLPDLYPTQGTRSLVEEHARITI 297
Query: 57 IE-ANEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWS 114
+ A IL FD L +A L + GV + +V+ V+S L G VP+G+LVW+
Sbjct: 298 YDVAPRILGMFDTALGEFAERHLKREGVSIRPNHVVERVESGMLHFKGGEAVPFGMLVWA 357
Query: 115 TGVGPSTLVKSLD-LPKSPG--GRIGIDEWLRV-----PSVQDVFAVGDCSGYLESTGKT 166
TG+ + VKSL + K P RI D LRV +++DVFA+GDC+ +
Sbjct: 358 TGLATNPFVKSLKGIEKEPAHQARILTDAKLRVLKEGGEAIEDVFALGDCAAVKDGP--- 414
Query: 167 VLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKAL 226
VLP AQVA ++ YL N + D + FV+++ G++A +G ++A+
Sbjct: 415 VLPTTAQVASQKANYLVKHFN------------SGDPDRTTDFVFKNFGALAYLGGWRAI 462
Query: 227 VDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+ + + ++ G+ +W++WR AYLT+ VSWRN+ + W
Sbjct: 463 M------QGESQNIKGWAAWVIWRGAYLTKSVSWRNKILIPTLW 500
>gi|169615176|ref|XP_001801004.1| hypothetical protein SNOG_10743 [Phaeosphaeria nodorum SN15]
gi|160702901|gb|EAT82137.2| hypothetical protein SNOG_10743 [Phaeosphaeria nodorum SN15]
Length = 568
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 167/320 (52%), Gaps = 52/320 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
S+EEK RLLH VVVGGGPTGVEF+GEL DF D+++ +KD HVTL+EA +L
Sbjct: 258 SDEEKKRLLHMVVVGGGPTGVEFAGELQDFFHSDLKKWLPEIKDNFHVTLVEALPNVLPM 317
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL----ILNDGT----EVPYGLLVWSTG 116
F +L Y + + + + +VK+V + + + DG ++PYGLLVW+TG
Sbjct: 318 FSKQLIDYTEKTFDEEAITIRTKTMVKNVAPKYIEAESVGPDGKKQLEKIPYGLLVWATG 377
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+VK L +P R G ++E+L V ++V+AVGDC+ + + T A
Sbjct: 378 NALRPVVKDLINQIPAQKDSRRGLAVNEYLVVKGTENVWAVGDCA--VANYAPT-----A 430
Query: 173 QVAERQGKYLFSLLNRIG-----------------KAGGGRANSAKDMELGD-------- 207
QVA ++G +L + N + KA G A E+ +
Sbjct: 431 QVAAQEGAFLARMFNNMAKTQEIDAQLAELSIAQEKAPGKEARDKIFEEIKNLQKRLRRV 490
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG KA+ D+ + S ++ G ++++ WRSAYL+ S RNR
Sbjct: 491 KQIGPFEYSHQGSLAYIGSEKAVADI--SWFSGNIASGGTVTYIFWRSAYLSMCFSTRNR 548
Query: 264 FYVAVNWATTFVFGRDISRI 283
V ++W VFGRD+SR+
Sbjct: 549 VLVIMDWVKAKVFGRDVSRV 568
>gi|238883022|gb|EEQ46660.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 622
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 153/306 (50%), Gaps = 35/306 (11%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE- 61
L + + ++ RLLH VV GGGPTGVE +GE+ D+I +D+++ + + V+L+E+
Sbjct: 325 LLPVGDPDRKRLLHIVVCGGGPTGVEAAGEIQDYIDQDLKKWMPQIAKDMKVSLVESQPV 384
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDG----TEVPYGLLVWST 115
+L +F L Y + + LV IVK D+ ++ +VPYG+L+W+T
Sbjct: 385 VLHTFSSELVEYTNHIFKDTNINLVTNSRIVKVDDTHVDVMRKSDKSIDKVPYGMLIWAT 444
Query: 116 GVGPSTLVKSL-----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA 170
G K + + SP G + +D+ L++ +++A+GDC+ T
Sbjct: 445 GNSVRGFTKIIMDKFSEQQTSPRGLL-VDDQLKLKGSDNIYALGDCTF-------TKYAP 496
Query: 171 LAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD--------------PFVYRHLGS 216
AQVA +QG YL ++ K R +D + + FVY + GS
Sbjct: 497 TAQVAFQQGIYLAHYFEKLQKVEKLRYKIKQDPSISEVYVHRLQRLENSLPKFVYNYRGS 556
Query: 217 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 276
+A IG KA+ DL S LS G L++L WRSAY+ +S +N+ V +W ++F
Sbjct: 557 LAYIGSEKAVADLAVGSWS-NLSSGGNLTFLFWRSAYIMMCLSIKNQLLVCFDWIKVYLF 615
Query: 277 GRDISR 282
GRD SR
Sbjct: 616 GRDCSR 621
>gi|340515469|gb|EGR45723.1| predicted protein [Trichoderma reesei QM6a]
Length = 499
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 153/334 (45%), Gaps = 67/334 (20%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
+SE +K LLH V+VGGGPTG+EF+ EL D I D+++ Y + + +T+ + A ++L
Sbjct: 177 LSEADKRSLLHFVIVGGGPTGIEFAAELHDLIHEDLKRLYPELMPLVRITVYDIAPKVLP 236
Query: 65 SFDDRLRHYATTQLSKSG-----------VRLVRGIVKDVDS--QKLILNDGTEVPYGLL 111
FD L YA ++ G VR+ G + I EV GL+
Sbjct: 237 MFDQALAQYAMDTFARQGIQVRTQHHLERVRIADGALGSAHGGLSIKIKEYSEEVNAGLV 296
Query: 112 VWSTGVGPSTLVKSL---------DLPKSPG--------------GRIGIDEWLRV---- 144
VWSTG+ + V+ L D G G I D +LR
Sbjct: 297 VWSTGLMQNPFVEHLVGKEFALAEDTDHQKGQDAQRRRLVKDAKTGGILTDAYLRARITD 356
Query: 145 ---------------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 189
P + DVF +GDC+ + LP AQVA +Q YL LN+
Sbjct: 357 NEASQPHDTAGATAKPVMPDVFVIGDCA---VNEHDRSLPKTAQVAAQQAGYLAKHLNK- 412
Query: 190 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 249
G +S PF +R+ G++ +G +KA+ +S L G+++W+VW
Sbjct: 413 -ATHNGSLDSVDVSSTWKPFKFRNWGTLTYLGGWKAI------HQSSADELRGWVAWVVW 465
Query: 250 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
R AYLTR +S RN+ V V W ++VFGRDISR
Sbjct: 466 RGAYLTRSMSLRNKMMVPVYWFVSWVFGRDISRF 499
>gi|452837777|gb|EME39719.1| hypothetical protein DOTSEDRAFT_75385 [Dothistroma septosporum
NZE10]
Length = 514
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 155/311 (49%), Gaps = 54/311 (17%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L +EE K L+ VVGGGPTG+E+S EL D + D+++ Y + +++ +T+ + A
Sbjct: 228 LPTTTEEMKKNYLNFAVVGGGPTGIEWSAELYDMVHEDMKRLYPELIEHVKITVYDVAPN 287
Query: 62 ILSSFDDRLRHYATTQLSKSGV---------RLVRGI---------VKDVDS-QKLILND 102
+LS FD L +YA ++G+ L G+ KD DS L + +
Sbjct: 288 VLSMFDKSLGNYAMKTFGRNGIDIKTSHHIEELRPGVPQGQRPPPGTKDGDSLYTLKVKE 347
Query: 103 GTEVPYGLLVWSTGVGPSTLVKSLDLPKSP----------GGRIGIDEWLRVPSVQDVFA 152
E+ G++VWSTG+ + V+ K G + I + P + +VFA
Sbjct: 348 EGEIGTGMVVWSTGLMMNPFVEHGLADKVKLHERNHGLVTNGHLQIQDKEGQP-ISNVFA 406
Query: 153 VGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYR 212
+GDC+ LE T PA AQVA ++ +L LN+ G N F Y+
Sbjct: 407 LGDCA-VLEGTA---YPATAQVASQKANWLAKQLNK----GTIEQNE---------FKYK 449
Query: 213 HLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWAT 272
LG MA IG KA++ +S G + G ++WL+WR AYLT+ VSWRN+ + + W
Sbjct: 450 DLGVMAYIGNQKAIM------QSGGSGINGRIAWLIWRGAYLTKTVSWRNKILIPIYWTL 503
Query: 273 TFVFGRDISRI 283
+ FGRDISR
Sbjct: 504 NWFFGRDISRF 514
>gi|451845692|gb|EMD59004.1| hypothetical protein COCSADRAFT_31149 [Cochliobolus sativus ND90Pr]
Length = 576
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 165/321 (51%), Gaps = 54/321 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
SEEEK RLLH VVVGGGPTGVEF+GEL DF D+++ ++D VTL+EA +L
Sbjct: 266 SEEEKKRLLHMVVVGGGPTGVEFAGELQDFFHSDLKKWLPEIQDNFKVTLVEALPNVLPM 325
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGT---------EVPYGLLVWST 115
F +L Y + + + + +VK+V + K I + T +PYGLLVW+T
Sbjct: 326 FSKQLIDYTEKTFKEETIDIRTKTMVKNV-TDKYIEAESTGPDGKKQLERIPYGLLVWAT 384
Query: 116 GVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 171
G +VK L +P R G ++E+L V ++V+AVGDC+ + + T
Sbjct: 385 GNALRPIVKDLINQIPAQKDSRRGLAVNEYLVVKGAENVWAVGDCA--VANYAPT----- 437
Query: 172 AQVAERQGKYLFSLLNRIGKAG--------------GGRANSAKDMELGD---------- 207
AQVA ++G +L + N + K A+D G+
Sbjct: 438 AQVAAQEGAFLARMFNNMAKTAEIESQLAELSVAQEKAPGKEARDKVFGEIKALQQRLRR 497
Query: 208 -----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRN 262
PF Y H GS+A IG KA+ D+ + + ++ G ++++ WRSAYL+ S RN
Sbjct: 498 IKSIGPFEYSHQGSLAYIGSEKAVADI--SWFAGNIASGGTITYIFWRSAYLSMCFSTRN 555
Query: 263 RFYVAVNWATTFVFGRDISRI 283
R V ++WA +FGRD+SR+
Sbjct: 556 RILVMLDWAKAKIFGRDVSRV 576
>gi|154309236|ref|XP_001553952.1| hypothetical protein BC1G_07512 [Botryotinia fuckeliana B05.10]
gi|347837288|emb|CCD51860.1| similar to external NADH-ubiquinone oxidoreductase [Botryotinia
fuckeliana]
Length = 571
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/319 (35%), Positives = 161/319 (50%), Gaps = 54/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
S EE RLLH VVVGGGPTGVEF+GEL DF +D+++ + D VTLIEA +L
Sbjct: 263 SPEEVERLLHMVVVGGGPTGVEFAGELQDFFDQDIKKWVPEISDKFKVTLIEALPNVLPM 322
Query: 66 FDDRLRHYATTQLSKSGVRL-----VRGIVKDVDSQKLILNDG---TEV-PYGLLVWSTG 116
F +L Y + + + + V+ + + I DG TEV PYGLLVW+TG
Sbjct: 323 FSKQLIEYTESTFKEEKITIKTKTAVKKVTDKTVEAEAIGPDGKKFTEVMPYGLLVWATG 382
Query: 117 VGPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPA 170
+V+ L +P R + ++E+L V +D++A GDC +GY +
Sbjct: 383 NAVRPVVRDLMAQIPAQKDSRRGLAVNEYLVVQGTKDIWATGDCAVAGYAPT-------- 434
Query: 171 LAQVAERQGKYLFSLLNRIGKAG-----------------GGRANSAKDMELGD------ 207
AQVA ++G +L L N + K G A AKD+E +
Sbjct: 435 -AQVASQEGAFLARLFNTMAKTDTIEHEIQELSSSLNLGPGNAAQVAKDIEAHEKQLRRV 493
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GSMA IG +A+ D+ + + + G L++L WRSAYL+ S RNR
Sbjct: 494 KDIKPFHYTHQGSMAYIGSERAVADV--SWLNGNFATGGNLTYLFWRSAYLSMCFSTRNR 551
Query: 264 FYVAVNWATTFVFGRDISR 282
V ++W + FGRD+SR
Sbjct: 552 VLVVLDWLKSKAFGRDVSR 570
>gi|302409055|ref|XP_003002362.1| external NADH-ubiquinone oxidoreductase [Verticillium albo-atrum
VaMs.102]
gi|261359283|gb|EEY21711.1| external NADH-ubiquinone oxidoreductase [Verticillium albo-atrum
VaMs.102]
Length = 588
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 166/321 (51%), Gaps = 54/321 (16%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEIL 63
G + EE RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L
Sbjct: 278 GQTNEEIDRLLHMVVVGGGPTGVEFAGELQDFFEDDIKRLVPDIADRFKVTLIEALPNVL 337
Query: 64 SSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKL----ILNDGTE----VPYGLLVWS 114
SF +L Y + + L + +VK+V + DG++ +PYGLLVW+
Sbjct: 338 PSFSKQLIEYTENTFKEEKIDILTKTMVKNVTDTTVEAVGTNPDGSKKTIVIPYGLLVWA 397
Query: 115 TGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVL 168
TG ++K L +P R G ++E+L V +D++A+GDC +GY +
Sbjct: 398 TGNAVRPIIKELISKIPAQKDSRRGLAVNEYLVVQGTRDIWAIGDCAVAGYAPT------ 451
Query: 169 PALAQVAERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD---- 207
AQVA ++G +L L N + K G A +A+++E +
Sbjct: 452 ---AQVAGQEGSFLARLFNNMAKTEELESKVRELSSNLNVKPGNSAEAAREIEACERQLR 508
Query: 208 ------PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWR 261
PF Y H GS+A IG KA+ D+ + + ++ G L++L WRSAYL+ S R
Sbjct: 509 RIKDVKPFHYTHQGSLAYIGSEKAVADV--SWWNGNIASGGSLTFLFWRSAYLSMCFSTR 566
Query: 262 NRFYVAVNWATTFVFGRDISR 282
NR V ++W + FGRD+SR
Sbjct: 567 NRLLVIIDWLKSKAFGRDVSR 587
>gi|119174138|ref|XP_001239430.1| hypothetical protein CIMG_09051 [Coccidioides immitis RS]
gi|392869615|gb|EAS28129.2| alternative NADH-dehydrogenase [Coccidioides immitis RS]
Length = 579
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 168/320 (52%), Gaps = 54/320 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+ EE RLLH VVVGGGPTGVEF+GEL DF D+++ +KD HVTL+EA +L
Sbjct: 269 TPEEVKRLLHMVVVGGGPTGVEFAGELQDFFNEDLKKWIPDIKDNFHVTLVEALPNVLPM 328
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL---ILN-DGT----EVPYGLLVWSTG 116
F +L Y + + + + + +VK+V + + + N DG+ ++PYGLLVW+TG
Sbjct: 329 FSKQLIDYTESTFKEEAITIRTKTMVKNVTDKYIEAEVTNPDGSKEMEKIPYGLLVWATG 388
Query: 117 VGPSTLVKSLDLPKSPGGRI-----GIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 171
+VK L + + P +I ++E+L V ++++AVGDC+ T
Sbjct: 389 NAVRPVVKDL-MSQIPAQKISRRGLAVNEYLVVNGTENIWAVGDCA-------ITNYAPT 440
Query: 172 AQVAERQGKYLFSLLNRIGKAGGGRAN---------SAKDMELGD--------------- 207
AQVA ++G +L L N + K + AKD E +
Sbjct: 441 AQVASQEGAFLARLFNTMAKTEAIEKDLKKLSVAQYEAKDDEKRNQLLDEIRALQKQLRR 500
Query: 208 -----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRN 262
PF Y H GS+A IG+ +A+ D+ + S ++ G L++L WRSAYL+ S RN
Sbjct: 501 TKQIGPFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTLTYLFWRSAYLSMCFSTRN 558
Query: 263 RFYVAVNWATTFVFGRDISR 282
R VA++W +FGRD+SR
Sbjct: 559 RVLVALDWVKARLFGRDVSR 578
>gi|68475691|ref|XP_718052.1| potential mitochondrial nonproton-pumping NADH dehydrogenase
[Candida albicans SC5314]
gi|68475826|ref|XP_717986.1| potential mitochondrial nonproton-pumping NADH dehydrogenase
[Candida albicans SC5314]
gi|46439728|gb|EAK99042.1| potential mitochondrial nonproton-pumping NADH dehydrogenase
[Candida albicans SC5314]
gi|46439803|gb|EAK99116.1| potential mitochondrial nonproton-pumping NADH dehydrogenase
[Candida albicans SC5314]
Length = 622
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 153/306 (50%), Gaps = 35/306 (11%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE- 61
L + + ++ RLLH VV GGGPTGVE +GE+ D+I +D+++ + + V+L+E+
Sbjct: 325 LLPVGDPDRKRLLHIVVCGGGPTGVEAAGEIQDYIDQDLKKWMPQIAKDMKVSLVESQPV 384
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDG----TEVPYGLLVWST 115
+L +F L Y + + LV IVK D+ ++ +VPYG+L+W+T
Sbjct: 385 VLHTFSSELVEYTNHIFQDTNINLVTNSRIVKVDDTHVDVMRKSDKSIDKVPYGMLIWAT 444
Query: 116 GVGPSTLVKSL-----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA 170
G K + + SP G + +D+ L++ +++A+GDC+ T
Sbjct: 445 GNSVRGFTKIIMDKFSEQQTSPRGLL-VDDQLKLKGSDNIYALGDCTF-------TKYAP 496
Query: 171 LAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD--------------PFVYRHLGS 216
AQVA +QG YL ++ K R +D + + FVY + GS
Sbjct: 497 TAQVAFQQGIYLAHYFEKLQKVEKLRYKIKQDPSISEVYVHRLQRLENSLPKFVYNYRGS 556
Query: 217 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 276
+A IG KA+ DL S LS G L++L WRSAY+ +S +N+ V +W ++F
Sbjct: 557 LAYIGSEKAVADLAVGSWS-NLSSGGNLTFLFWRSAYIMMCLSIKNQVLVCFDWIKVYLF 615
Query: 277 GRDISR 282
GRD SR
Sbjct: 616 GRDCSR 621
>gi|451998250|gb|EMD90715.1| hypothetical protein COCHEDRAFT_1179822 [Cochliobolus
heterostrophus C5]
Length = 572
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 165/321 (51%), Gaps = 54/321 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
SEEEK RLLH VVVGGGPTGVEF+GEL DF D+++ ++D VTL+EA +L
Sbjct: 262 SEEEKKRLLHMVVVGGGPTGVEFAGELQDFFHSDLKKWLPEIQDNFKVTLVEALPNVLPM 321
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGT---------EVPYGLLVWST 115
F +L Y + + + + +VK+V + K I + T +PYGLLVW+T
Sbjct: 322 FSKQLIDYTEKTFKEETIDIRTKTMVKNV-TDKYIEAESTGPDGRKQLERIPYGLLVWAT 380
Query: 116 GVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 171
G +VK L +P R G ++E+L V ++V+AVGDC+ + + T
Sbjct: 381 GNALRPIVKDLINQIPAQKDSRRGLAVNEYLVVKGTENVWAVGDCA--VANYAPT----- 433
Query: 172 AQVAERQGKYLFSLLNRIGKAG--------------GGRANSAKDMELGD---------- 207
AQVA ++G +L + N + K A+D G+
Sbjct: 434 AQVAAQEGAFLARMFNNMAKTAEIEGQLAELSIAQEKAPGKEARDKVFGEIKALQQRLRR 493
Query: 208 -----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRN 262
PF Y H GS+A IG KA+ D+ + + ++ G ++++ WRSAYL+ S RN
Sbjct: 494 IKSIGPFEYSHQGSLAYIGSEKAVADI--SWFAGNIASGGTITYIFWRSAYLSMCFSTRN 551
Query: 263 RFYVAVNWATTFVFGRDISRI 283
R V ++WA +FGRD+SR+
Sbjct: 552 RILVMLDWAKAKIFGRDVSRV 572
>gi|429855295|gb|ELA30259.1| alternative nadh-dehydrogenase [Colletotrichum gloeosporioides Nara
gc5]
Length = 583
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 165/319 (51%), Gaps = 54/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
S E+ SRL+H VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L S
Sbjct: 275 SAEDISRLMHMVVVGGGPTGVEFAGELQDFFEEDIKRLVPEIADRFKVTLIEALPNVLPS 334
Query: 66 FDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLIL----NDGTE----VPYGLLVWSTG 116
F +L Y + + L + +VK V ++ + DG + +PYGLLVW+TG
Sbjct: 335 FSKQLIEYTEKTFEEEKIDILTKTMVKKVTNETVEAVATGPDGKQQTLTIPYGLLVWATG 394
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPA 170
+V+ L +P R G ++E+L V +D++A+GDC +GY +
Sbjct: 395 NAVRPIVRDLISKIPAQKDSRRGLAVNEYLVVQGARDIWAIGDCAVAGYAPT-------- 446
Query: 171 LAQVAERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD------ 207
AQVA ++G +L L N + + G A AK++E +
Sbjct: 447 -AQVAAQEGNFLAKLFNNMARTESLEARVQELSANLNVKPGNAAEVAKEIEAHERQLRRI 505
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG KA+ D+ + + ++ G +++L WRSAYL+ S RNR
Sbjct: 506 KDIKPFHYSHQGSLAYIGSEKAVADV--SWWNGNIASGGSMTYLFWRSAYLSMCFSTRNR 563
Query: 264 FYVAVNWATTFVFGRDISR 282
V +W + VFGRDISR
Sbjct: 564 LLVINDWLKSKVFGRDISR 582
>gi|254521239|ref|ZP_05133294.1| NADH dehydrogenase protein [Stenotrophomonas sp. SKA14]
gi|219718830|gb|EED37355.1| NADH dehydrogenase protein [Stenotrophomonas sp. SKA14]
Length = 426
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 144/270 (53%), Gaps = 25/270 (9%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFD 67
+K+ L +VGGGPTGVE +G L++ +R + H+ V L+EA +LSSF
Sbjct: 155 KKAAWLSFAIVGGGPTGVELAGTLAEIARHTLRNEFRHIDPASAKVRLVEAGPRVLSSFP 214
Query: 68 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
+ L A QL K GV ++ G V D+DSQ L + VP +VW+ GV S L ++L
Sbjct: 215 EVLSLKARRQLEKLGVEVLTGTPVSDIDSQGFKLGE-QFVPARTVVWAAGVAASPLARTL 273
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
D+P GR+ + L +P ++F GD + ++ GK V P +A A++ GKY+ ++
Sbjct: 274 DVPLDRAGRVQVQPDLTLPDHPELFVAGDLAALNQANGKPV-PGVAPAAKQMGKYVAEVI 332
Query: 187 N-RI-GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
R+ GK G PF Y G++ATIGR A+V L + L L+G L
Sbjct: 333 RARLHGKPAPG------------PFKYADYGNLATIGRMAAIVHLGR------LQLSGIL 374
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
+W W +A++ ++ +RNR V +NWA +
Sbjct: 375 AWWFWLAAHVFFLIGFRNRIVVLLNWAVAY 404
>gi|330921115|ref|XP_003299290.1| hypothetical protein PTT_10249 [Pyrenophora teres f. teres 0-1]
gi|311327092|gb|EFQ92606.1| hypothetical protein PTT_10249 [Pyrenophora teres f. teres 0-1]
Length = 577
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 165/321 (51%), Gaps = 54/321 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
SEEEK RLLH VVVGGGPTGVEF+GEL DF D+++ ++D VTL+EA +L
Sbjct: 267 SEEEKKRLLHMVVVGGGPTGVEFAGELQDFFHSDLKKWLPEIQDNFKVTLVEALPNVLPM 326
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGT---------EVPYGLLVWST 115
F +L Y + + + + +VK+V S K I + T ++PYGLLVW+T
Sbjct: 327 FSKQLIDYTEKTFKEETITIRTKTMVKNVTS-KFIEAESTGPDGKKQLEKIPYGLLVWAT 385
Query: 116 GVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 171
G +VK L +P R G ++E+L V ++V+AVGDC+ + + T
Sbjct: 386 GNALRPIVKDLINQIPAQKDSRRGLAVNEYLVVKGTENVWAVGDCA--VANYAPT----- 438
Query: 172 AQVAERQGKYLFSLLNRIGKAG--------------GGRANSAKDMELGD---------- 207
AQVA ++G +L + N + K A+D +
Sbjct: 439 AQVAAQEGAFLARMFNNMAKTSEIESELKELSIAQETAPGKEARDKVFNEIKALQQRLRR 498
Query: 208 -----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRN 262
PF Y H GS+A IG KA+ D+ + + ++ G ++++ WRSAYL+ S RN
Sbjct: 499 IKQIGPFEYSHQGSLAYIGSEKAVADV--SWFAGNIASGGTITYIFWRSAYLSMCFSTRN 556
Query: 263 RFYVAVNWATTFVFGRDISRI 283
R V ++WA +FGRD+SR+
Sbjct: 557 RILVMLDWAKAKIFGRDVSRV 577
>gi|367050222|ref|XP_003655490.1| hypothetical protein THITE_2119240 [Thielavia terrestris NRRL 8126]
gi|347002754|gb|AEO69154.1| hypothetical protein THITE_2119240 [Thielavia terrestris NRRL 8126]
Length = 583
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/319 (35%), Positives = 164/319 (51%), Gaps = 54/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
S EE RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L
Sbjct: 275 SPEEIDRLLHMVVVGGGPTGVEFAGELQDFFEEDIKKLVPEISDRFRVTLIEALPSVLPM 334
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTG 116
F +L Y + + + + + +VK V + ++ DGT+ PYGLLVW+TG
Sbjct: 335 FSKQLIEYTESTFKEEKINIHTKTMVKKVTDKTVEAEVTRPDGTKETVVFPYGLLVWATG 394
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPA 170
+VK L +P R G ++E+L V +D++AVGDC +GY +
Sbjct: 395 NAVRPVVKDLMARIPAQKNSRRGLAVNEYLVVQGTRDIWAVGDCAVAGYAPT-------- 446
Query: 171 LAQVAERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD------ 207
AQVA ++G +L L N + K G A ++++E +
Sbjct: 447 -AQVASQEGNFLARLFNNMAKTEALESKIRELSSSLNLQPGNSAAISREIEEHERQLRRI 505
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG KA+ D+ + ++ AG L++L WRSAY++ S RNR
Sbjct: 506 KDIKPFYYSHQGSLAYIGSEKAVADVTWF--NGNVAAAGSLTFLFWRSAYISMCFSMRNR 563
Query: 264 FYVAVNWATTFVFGRDISR 282
V +W + VFGRD+SR
Sbjct: 564 LLVINDWLKSKVFGRDLSR 582
>gi|310789750|gb|EFQ25283.1| hypothetical protein GLRG_00427 [Glomerella graminicola M1.001]
Length = 583
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 164/319 (51%), Gaps = 54/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
S E+ +RL+H VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L S
Sbjct: 275 SAEDVNRLMHMVVVGGGPTGVEFAGELQDFFEEDIKRLVPEIADRFKVTLIEALPNVLPS 334
Query: 66 FDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGTE----VPYGLLVWSTG 116
F +L Y + + L + +VK+V + DG + +PYGLLVW+TG
Sbjct: 335 FSKQLIEYTEKTFKEEKIDILTKTMVKNVTDTHVQAEATGPDGKKQTLTIPYGLLVWATG 394
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPA 170
+V+ L +P R G ++E+L V +D++A+GDC +GY +
Sbjct: 395 NAVRPIVRDLISKIPAQKDSRRGLAVNEYLVVQGTRDIWAIGDCAVAGYAPT-------- 446
Query: 171 LAQVAERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD------ 207
AQVA ++G +L L N + + G A AK++E +
Sbjct: 447 -AQVAAQEGSFLARLFNNMARTETVEARVRELSKDLNLKPGNAAEVAKEIEAHERQLRRI 505
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GSMA IG KA+ D+ + + ++ G +++L WRSAYL+ S RNR
Sbjct: 506 KDIKPFHYSHQGSMAYIGSEKAVADV--SWWNGNIASGGSMTYLFWRSAYLSMCFSTRNR 563
Query: 264 FYVAVNWATTFVFGRDISR 282
V +W + VFGRDISR
Sbjct: 564 LLVVNDWLKSKVFGRDISR 582
>gi|241956708|ref|XP_002421074.1| external NADH-ubiquinone oxidoreductase, mitochondrial precursor,
putative; mitochondrial external NADH dehydrogenase,
putative [Candida dubliniensis CD36]
gi|223644417|emb|CAX41231.1| external NADH-ubiquinone oxidoreductase, mitochondrial precursor,
putative [Candida dubliniensis CD36]
Length = 529
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 152/305 (49%), Gaps = 33/305 (10%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE- 61
L I + ++ RLLH VV GGGPTGVE +GE+ D+I +D+++ + + + V+L+E+
Sbjct: 232 LLPIGDSDRKRLLHIVVCGGGPTGVEAAGEIQDYIDQDLKKWMPQIANDMKVSLVESQPV 291
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDG----TEVPYGLLVWST 115
+L +F L Y T + + LV IV D+ ++ +VPYG+L+W+T
Sbjct: 292 VLHTFSSELVEYTNTIFKDTNINLVTNSRIVNVDDTHVDVMRKSDKSIDKVPYGMLIWAT 351
Query: 116 GVG----PSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 171
G ++ ++ + +D+ L++ ++FA+GDC+ T
Sbjct: 352 GNSVRGFTKIIMDKFSEQQTSSRGLLVDDQLKLKGSNNIFALGDCTF-------TNYAPT 404
Query: 172 AQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD--------------PFVYRHLGSM 217
AQVA +QG YL ++ + R +D + + FVY + GS+
Sbjct: 405 AQVAFQQGIYLAQYFEKLQEVEKLRYKIKQDPSISEVYVHRLQRLENSLPTFVYNYRGSL 464
Query: 218 ATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFG 277
A IG KA+ DL S LS G L++L WRSAY+ +S +N+ V +W ++FG
Sbjct: 465 AYIGSEKAVADLAVGSWS-NLSSGGNLTFLFWRSAYIMMCLSIKNQVLVCFDWIKVYLFG 523
Query: 278 RDISR 282
RD SR
Sbjct: 524 RDCSR 528
>gi|189207893|ref|XP_001940280.1| external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187976373|gb|EDU42999.1| external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 577
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 166/321 (51%), Gaps = 54/321 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
SEEEK RLLH VVVGGGPTGVEF+GEL DF D+++ ++D VTL+EA +L
Sbjct: 267 SEEEKKRLLHMVVVGGGPTGVEFAGELQDFFHSDLKKWLPEIQDNFKVTLVEALPNVLPM 326
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGT---------EVPYGLLVWST 115
F +L Y + + + + +VK+V ++K I + T ++PYGLLVW+T
Sbjct: 327 FSKQLIDYTEKTFKEETITIRTKTMVKNV-TEKFIEAESTGPDGKKQLEKIPYGLLVWAT 385
Query: 116 GVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 171
G +VK L +P R G ++E+L V ++V+AVGDC+ + + T
Sbjct: 386 GNALRPIVKDLINQIPAQKDSRRGLAVNEYLVVKGTENVWAVGDCA--VANYAPT----- 438
Query: 172 AQVAERQGKYLFSLLNRIGKAG--------------GGRANSAKDMELGD---------- 207
AQVA ++G +L + N + K A+D +
Sbjct: 439 AQVAAQEGAFLARMFNNMAKTSEIESELKQLSIAQETAPGKEARDKVFNEIKALQQRLRR 498
Query: 208 -----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRN 262
PF Y H GS+A IG KA+ D+ + + ++ G ++++ WRSAYL+ S RN
Sbjct: 499 IKQIGPFEYSHQGSLAYIGSEKAVADV--SWFAGNIASGGTITYIFWRSAYLSMCFSTRN 556
Query: 263 RFYVAVNWATTFVFGRDISRI 283
R V ++WA +FGRD+SR+
Sbjct: 557 RILVMLDWAKAKIFGRDVSRV 577
>gi|367027590|ref|XP_003663079.1| hypothetical protein MYCTH_2304512 [Myceliophthora thermophila ATCC
42464]
gi|347010348|gb|AEO57834.1| hypothetical protein MYCTH_2304512 [Myceliophthora thermophila ATCC
42464]
Length = 581
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 114/319 (35%), Positives = 164/319 (51%), Gaps = 54/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
S EE RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L
Sbjct: 273 SPEEIDRLLHMVVVGGGPTGVEFAGELQDFFEEDIKKLVPEISDRFRVTLIEALPNVLPM 332
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTG 116
F +L Y + + + + + +VK V + ++ DG + PYGLLVW+TG
Sbjct: 333 FSKQLIEYTESTFKEEKINIHTKTVVKKVTDKTVEAEVTRPDGKKETVVFPYGLLVWATG 392
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPA 170
+V+ L +P G R G ++E+L V +D++AVGDC +GY +
Sbjct: 393 NAVRPVVRDLMSRIPAQAGSRRGLAVNEYLVVQGTRDIWAVGDCAVAGYAPT-------- 444
Query: 171 LAQVAERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD------ 207
AQVA ++G +L L N + K G A ++++E +
Sbjct: 445 -AQVASQEGTFLARLFNNMAKTEALEARIRELSSSLNLRPGNSAEISREIEQHERQLRRL 503
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG KA+ D+ + L+ AG L++L WRSAY++ S RNR
Sbjct: 504 KDIKPFHYSHQGSLAYIGSEKAVADV--TWFNGNLAAAGSLTFLFWRSAYISMCFSTRNR 561
Query: 264 FYVAVNWATTFVFGRDISR 282
V +W + VFGRD+SR
Sbjct: 562 LLVINDWLKSKVFGRDLSR 580
>gi|386720144|ref|YP_006186470.1| NADH dehydrogenase [Stenotrophomonas maltophilia D457]
gi|384079706|emb|CCH14308.1| NADH dehydrogenase [Stenotrophomonas maltophilia D457]
Length = 426
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 142/267 (53%), Gaps = 21/267 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFDD 68
K+ L +VGGGPTGVE +G L++ +R + H+ V L+EA +LSSF +
Sbjct: 156 KAAWLSFAIVGGGPTGVELAGTLAEIARHTLRNEFRHIDPASAKVRLVEAGPRVLSSFPE 215
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L A QL K GV ++ G V D+DSQ L + VP +VW+ GV S L ++LD
Sbjct: 216 VLSLKARRQLEKLGVEVLTGTPVSDIDSQGFKLGE-QFVPARTVVWAAGVAASPLARTLD 274
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ + L +P ++F GD + ++ GK V P +A A++ GKY+ ++
Sbjct: 275 VPLDRAGRVQVQPDLTLPDHPELFVAGDLAALSQADGKPV-PGVAPAAKQMGKYVAEVV- 332
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
RA E G PF Y G++ATIGR A+V L + L L+G L+W
Sbjct: 333 --------RARLHGKPEPG-PFKYADYGNLATIGRMAAIVHLGR------LQLSGVLAWW 377
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTF 274
W +A++ ++ +RNR V +NWA +
Sbjct: 378 FWLAAHVFFLIGFRNRIVVLLNWAVAY 404
>gi|367016783|ref|XP_003682890.1| hypothetical protein TDEL_0G03120 [Torulaspora delbrueckii]
gi|359750553|emb|CCE93679.1| hypothetical protein TDEL_0G03120 [Torulaspora delbrueckii]
Length = 538
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/298 (37%), Positives = 166/298 (55%), Gaps = 31/298 (10%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
++ E+SRLL VVVGGGPTGVEF+ EL D++ +D+ + + I+VTL+EA IL+
Sbjct: 248 TDPERSRLLSFVVVGGGPTGVEFAAELRDYVDQDLAKWMPELSKEINVTLVEALPNILNM 307
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLIL---NDGTEVPYGLLVWSTGVGPST 121
FD L YA + + L ++ +VK+VD + +D T+VPYG+LVW+TG P
Sbjct: 308 FDKSLVDYAQDLFKQDRIDLKLKTMVKNVDKTHITAKCGDDLTKVPYGVLVWATGNAPRE 367
Query: 122 LVKSL-DLPKSPGGRIG--IDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPALAQVAER 177
+ K+L + + R G IDE L++ Q +FA+GDC+ Y + P AQVA +
Sbjct: 368 VSKNLMEKLEEQNSRRGLLIDEKLQLIGAQGSIFALGDCTFY-----PGLFPT-AQVAHQ 421
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELG--------------DPFVYRHLGSMATIGRY 223
+G+YL + ++ K + A+D PF Y H+G++A IG
Sbjct: 422 EGEYLAKVFKKLHKIDQTKWELAQDNTNDPKAQSKLNRLESQIQPFHYEHMGALAYIGSE 481
Query: 224 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
KA+ DL ESK S AG ++L W+SAYL +S+RNR +A++W + GRD S
Sbjct: 482 KAIADLAVG-ESKYRS-AGSFTFLFWKSAYLAMCMSFRNRILIAMDWTKVYFLGRDSS 537
>gi|121701619|ref|XP_001269074.1| alternative NADH-dehydrogenase [Aspergillus clavatus NRRL 1]
gi|119397217|gb|EAW07648.1| alternative NADH-dehydrogenase [Aspergillus clavatus NRRL 1]
Length = 570
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 166/318 (52%), Gaps = 52/318 (16%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
EEE RLLH VVVGGGPTGVEF+GEL DF D+++ +KD HVTL+EA +L F
Sbjct: 261 EEEVKRLLHMVVVGGGPTGVEFAGELQDFFNEDLKKWIPEIKDNFHVTLVEALPNVLPMF 320
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL---ILN-DGTE----VPYGLLVWSTGV 117
+L Y + + + + + +VK V + + + N DG++ +PYGLLVW+TG
Sbjct: 321 SKQLIDYTESTFKEEEITIRTKTMVKKVTDKYIEAEVTNPDGSKNLETIPYGLLVWATGN 380
Query: 118 GPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
+V+ L +P R G ++E+L V ++++AVGDC+ T AQ
Sbjct: 381 AVRNVVRDLMNQIPAQKNSRRGLAVNEYLVVNGAENIWAVGDCAV-------TNYAPTAQ 433
Query: 174 VAERQGKYLFSLLN-------------RIGKAGGGRANSAKDMELGD------------- 207
VA ++G +L L N R+ +A N + ++ D
Sbjct: 434 VAGQEGAFLARLFNTMAKTETVEKELQRLSEAQAQAKNEEERNQIFDEIRECQKQLRRNK 493
Query: 208 ---PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRF 264
PF Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ S RNR
Sbjct: 494 QIGPFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTVTYLFWRSAYLSMCFSTRNRV 551
Query: 265 YVAVNWATTFVFGRDISR 282
VA +W +FGRD+SR
Sbjct: 552 LVAADWIKAKLFGRDVSR 569
>gi|395329228|gb|EJF61616.1| NADH dehydrogenase [Dichomitus squalens LYAD-421 SS1]
Length = 553
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 113/311 (36%), Positives = 161/311 (51%), Gaps = 40/311 (12%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
G + +E RLLH VVVGGGPTGVE SGEL DF+ D+R Y + + + +TL+EA
Sbjct: 251 FPGQTSDEVKRLLHMVVVGGGPTGVELSGELHDFLEEDLRSWYPELAESVRITLVEALPS 310
Query: 62 ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGTEVPYGLLVWSTG 116
+L SF +L Y + ++ + L + +VK+V + ++L EVP GL+VW+ G
Sbjct: 311 VLPSFSKQLIDYTESTFKEAKIDILTKTMVKEVKEKSVVLQMPDKSIVEVPCGLVVWAAG 370
Query: 117 VGPSTLVKSL--DLPKSPGGRIGI--DEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPAL 171
+ + L LP++ R GI DE +R+ +FAVGDC T T P
Sbjct: 371 NTLRKVTRDLMAKLPEAQNNRRGITVDECMRMAGTDGSIFAVGDC------TATTYAPT- 423
Query: 172 AQVAERQGKYLFSLLNRIGKAGG-----GRANSAKDMELGD---------------PFVY 211
AQVA +QG YL +L ++ K ++A + E + PF Y
Sbjct: 424 AQVASQQGAYLARVLGQLAKRDNLEYRLKELDAAPEAEKQEREQAEKRLAKLEKLRPFKY 483
Query: 212 RHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA 271
H GS+A IG KA+ DL + L+ G ++L WRSAYL+ + S RNR VA +W
Sbjct: 484 SHQGSLAYIGSDKAIADLPFF--NGNLATGGVATFLFWRSAYLSTLFSMRNRTLVATDWL 541
Query: 272 TTFVFGRDISR 282
FGRD+SR
Sbjct: 542 KVKFFGRDVSR 552
>gi|390596084|gb|EIN05487.1| NADH dehydrogenase [Punctularia strigosozonata HHB-11173 SS5]
Length = 585
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 160/354 (45%), Gaps = 84/354 (23%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
G +E EK RLLH +VVGGGPTGVE SGEL DF++ D+R Y + + ++LIEA
Sbjct: 241 FPGQTEAEKDRLLHMIVVGGGPTGVELSGELHDFLVEDLRNWYPDLAPRMKISLIEALPS 300
Query: 62 ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN--DGT--EVPYGLLVWSTG 116
+L +F +L Y + ++ + L + +VK++ + +++ +GT E+P G++VW+ G
Sbjct: 301 VLPTFSKQLIDYTVSTFKEANIDVLTKTMVKEIRERSVVVKTPEGTDEEIPCGVVVWAGG 360
Query: 117 VGPSTLVKSLDLPKSPGGRIGID------------------------------------- 139
P + L + K P + +
Sbjct: 361 NKPRKVSTDL-MAKFPEAQTNRNHEPASATREILRGGGGGGGGGGGIEGKGKEEGATKDA 419
Query: 140 ---------EWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 190
+ LR+ +FA+GDC+ T AQVA ++G YL +L ++
Sbjct: 420 PSTTIPRYLDQLRMKGTDGIFAIGDCTS-------TSYAPTAQVASQEGAYLARVLAQVA 472
Query: 191 KAGGGRAN----------------------SAKDMELGDPFVYRHLGSMATIGRYKALVD 228
K A A+ +E PF Y H GS+A IG +A+ D
Sbjct: 473 KRDQALAELQKLEATATAPEAEKEKEKLKRQAEKLEKIRPFHYSHQGSLAYIGSDRAIAD 532
Query: 229 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
L + + S G ++L WRS YL+ + S RNR VA +W +FGRD+SR
Sbjct: 533 L--SVWQRTFSSGGAWTYLFWRSVYLSTLFSLRNRTLVATDWLKVKLFGRDVSR 584
>gi|255934090|ref|XP_002558326.1| Pc12g15240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582945|emb|CAP81151.1| Pc12g15240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 578
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 112/319 (35%), Positives = 168/319 (52%), Gaps = 52/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+E+E RLLH VVVGGGPTGVEF+GEL DF D+++ +KD HVTL+EA +L
Sbjct: 268 TEDEVKRLLHMVVVGGGPTGVEFAGELQDFFNDDLKKWIPEIKDNFHVTLVEALPNVLPM 327
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTG 116
F +L Y + + + + + +VK+V + ++ DG++ +PYGLLVW+TG
Sbjct: 328 FSKQLIDYTESTFKEEEISIRTKTMVKNVTDKYIQAEVTKPDGSKELETIPYGLLVWATG 387
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L +P R G ++E+L V +V+AVGDC+ + + T A
Sbjct: 388 NAIRPVVRDLMSQIPAQAESRRGLAVNEYLVVNGTDNVWAVGDCA--IANYAPT-----A 440
Query: 173 QVAERQGKYLFSLLNRIGKAGG---------GRANSAKDMELGD---------------- 207
QVA ++G +L L N + KA R + AK E +
Sbjct: 441 QVASQEGAFLGRLFNTMAKAEALEKELEALSERQSQAKAAEERNQIFDEIRERQKQLRRN 500
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ S RNR
Sbjct: 501 KQIGPFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTMTYLFWRSAYLSMCFSTRNR 558
Query: 264 FYVAVNWATTFVFGRDISR 282
V V+W +FGRD+SR
Sbjct: 559 VLVCVDWVKARLFGRDVSR 577
>gi|347841838|emb|CCD56410.1| similar to pyridine nucleotide-disulphide oxidoreductase
[Botryotinia fuckeliana]
Length = 564
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 162/339 (47%), Gaps = 81/339 (23%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 69
+ +LL+ +VGGGPTGVEF+ EL D D+ Y + +I +T+ + A +IL FD
Sbjct: 241 RKQLLNFAIVGGGPTGVEFAAELFDLCHEDLSTLYPSLTPFIKITIYDVAPKILPMFDKN 300
Query: 70 LRHYATTQLSKSGVR---------LVRGIVKD----VDSQK---LILNDGTEVPYGLLVW 113
L +YA + G+ L RG+ K+ D +K L L + +V G+ VW
Sbjct: 301 LANYALEHFKRDGIEIKTEHHILGLQRGLPKEGENGEDGEKGFTLKLKEEGDVGVGMCVW 360
Query: 114 STGVGPSTLV-------------------------------KSLDLPKSPG-GRIGIDEW 141
STG+ + + + +L +SP G + +D +
Sbjct: 361 STGLMMNPFIEKALSSVHTFPTQSAILAGSDSENIAEKLESRKWELKRSPKTGGLMVDNF 420
Query: 142 LRV-----------------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
RV ++ DVFA+GD + G LPA AQVA ++ ++L
Sbjct: 421 FRVKLATRSSPDGAKQSQQEATMNDVFALGDVA----VLGDMGLPATAQVANQEARWLGK 476
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
LN++ KAG + +A+D F +R++G M +G KA++ E KG +
Sbjct: 477 RLNKMEKAG--KIGAAED----KGFTFRNMGVMTYVGGMKAIMQTDGKGEIKGRT----- 525
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W++WR AYLT+ +SWRN+ + + WA ++FGRDISR
Sbjct: 526 AWVIWRGAYLTQTISWRNKILIPMYWAINWLFGRDISRF 564
>gi|358382239|gb|EHK19912.1| hypothetical protein TRIVIDRAFT_77030 [Trichoderma virens Gv29-8]
Length = 534
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 164/321 (51%), Gaps = 54/321 (16%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEIL 63
G + EE RL+H VVVGGGPTGVEF+GEL DF D+++ + VTLIEA +L
Sbjct: 224 GQTPEEIDRLMHMVVVGGGPTGVEFAGELQDFFEEDIKKLVPDISPRFKVTLIEALPNVL 283
Query: 64 SSFDDRLRHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGT----EVPYGLLVWS 114
F L Y L + + +V+ + + ++ DG+ ++PYGLLVW+
Sbjct: 284 PMFSKTLIDYTENTLREEKIDIKTKTMVKRVTEKAVEAEVSRPDGSKERVQIPYGLLVWA 343
Query: 115 TGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVL 168
TG ++K L +P R G ++E+L V +D++A+GDC +GY +
Sbjct: 344 TGNAVRPIIKDLASKIPAQKDSRRGLAVNEYLVVQGTRDIWAIGDCAVAGYAPT------ 397
Query: 169 PALAQVAERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD---- 207
AQVA ++G +L L N + K G A +A+++EL +
Sbjct: 398 ---AQVASQEGTFLGKLFNNMAKTENHEGRIQELSSKLNIESGNSAEAAQEIELLERQLK 454
Query: 208 ------PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWR 261
PF Y H GS+A IG KA+ D+ + + L+ G L++L WRSAYL+ S R
Sbjct: 455 KIRDVKPFKYSHQGSLAYIGSEKAVADV--SWWNGNLATGGSLTYLFWRSAYLSMCFSTR 512
Query: 262 NRFYVAVNWATTFVFGRDISR 282
NR V V+W + FGRD+SR
Sbjct: 513 NRVLVLVDWLKSKAFGRDVSR 533
>gi|70996132|ref|XP_752821.1| pyridine nucleotide-disulphide oxidoreductase [Aspergillus
fumigatus Af293]
gi|66850456|gb|EAL90783.1| pyridine nucleotide-disulphide oxidoreductase, putative
[Aspergillus fumigatus Af293]
gi|159131574|gb|EDP56687.1| pyridine nucleotide-disulphide oxidoreductase, putative
[Aspergillus fumigatus A1163]
Length = 545
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 157/337 (46%), Gaps = 73/337 (21%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L + E + LLH +VG GPTG E + L DFI RD+ Q Y + +TL + A
Sbjct: 224 LPTTAPEMRQWLLHFAIVGAGPTGTELAASLRDFISRDLMQLYPSLAGIPRITLYDVAPT 283
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-----VRGI---------VKDVDSQK---LILNDGT 104
+LS FD+RL YA + K G+ + V G+ ++D ++ L +
Sbjct: 284 VLSMFDERLAAYAMETMKKEGITIKTSHHVAGLRWGEPGASPPYEMDPKRCLTLTTKEEG 343
Query: 105 EVPYGLLVWSTGVGPSTLVK--------------------------SLDLPKSPGGRIGI 138
EV G+ VW TG + V+ S + K P G + +
Sbjct: 344 EVGVGMCVWVTGNQMNEFVRNSLEEVDVFPSASATAKGDKIKDENTSWKVKKGPNGALLV 403
Query: 139 DEWLRV---------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 189
D LRV ++DVFA+GD + + TG PA AQ ++ K+L + LN
Sbjct: 404 DGRLRVQLANDHGETAILRDVFALGDNA--MPETGAP--PATAQATFQEAKWLAAWLN-- 457
Query: 190 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN--KESKGLS--LAGFLS 245
A D+E PF +R++G++A IG +AL+ L + K L L G ++
Sbjct: 458 ----------ADDIEQAPPFSFRNMGTLAYIGDARALMQLPHEDGRRYKYLPHGLTGRMA 507
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
WLVW SAYLT +SWRNR VA W +FGRD+SR
Sbjct: 508 WLVWNSAYLTMSISWRNRLRVAFRWLLNNLFGRDVSR 544
>gi|322419925|ref|YP_004199148.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Geobacter sp. M18]
gi|320126312|gb|ADW13872.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Geobacter sp. M18]
Length = 418
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 148/282 (52%), Gaps = 27/282 (9%)
Query: 2 FLAGISEEEKSR---LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLI 57
F + + E + +R L+ V+VGGGPTGVEF+G L + + + + Y + + V L+
Sbjct: 140 FESAVVEPDPARKRALMTFVIVGGGPTGVEFAGALIELVHFVLAKDYPGLSTHTARVVLV 199
Query: 58 EA-NEILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWST 115
EA +++L++ ++ R Y +L V L+ V D ++++L+DG +P L WS
Sbjct: 200 EATDQLLAAMPEKQRKYTLKKLRSMSVEVLLNARVTDAGPERVMLHDGAIIPAHTLFWSA 259
Query: 116 GVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
GV + + LD P++ GGRI + L +P +VF +GD + YLE G + LP A VA
Sbjct: 260 GVKAAPIAAVLDAPRTTGGRIPVGPELNLPGHPEVFIIGDMA-YLEQEG-SALPMTAPVA 317
Query: 176 ERQGKYLFSLLNRIGKAGGGRANSAKDMELG-DPFVYRHLGSMATIGRYKALVDLRQNKE 234
+ G Y GRA AK+ PF + + G+MATIGR A+
Sbjct: 318 MQMGIY------------AGRAILAKEQGATLPPFRFHNKGTMATIGRNAAVAS------ 359
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 276
+ G+ G+L+WLVW +L ++ +RNR V +NW + F
Sbjct: 360 AFGMDFRGYLAWLVWLLLHLYYLIGFRNRIVVMLNWVWYYWF 401
>gi|116207256|ref|XP_001229437.1| hypothetical protein CHGG_02921 [Chaetomium globosum CBS 148.51]
gi|88183518|gb|EAQ90986.1| hypothetical protein CHGG_02921 [Chaetomium globosum CBS 148.51]
Length = 516
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 164/346 (47%), Gaps = 89/346 (25%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
+S+ +K +LLH +VGGGPTG+EF+ EL D I D+ Y + + +T+ + A ++L
Sbjct: 192 LSDADKRQLLHFAIVGGGPTGIEFAAELHDLIRDDLAPIYPELVPLVSITVYDVAPKVLP 251
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGT------------------EV 106
FD L YA ++ + + + Q+L L DG EV
Sbjct: 252 MFDQALAGYAMETFARQNIH----VKTEHHLQRLRLADGELGRRHNALKIKIAEYGDEEV 307
Query: 107 PYGLLVWSTGVGPSTLVKSL---DLP--------KSPG--------GRIG---IDEWLR- 143
GL+VWSTG+ + L+ L +LP SPG GR G D +LR
Sbjct: 308 GAGLVVWSTGLMANPLMAKLAAKNLPLNGTNPLSTSPGITRHLLRDGRTGGILTDGYLRA 367
Query: 144 ----------------VPS-----VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
P + DV+ +GDC+ +E+ T LP AQVA +Q YL
Sbjct: 368 RTTTTTNGNSNADDKATPPGAGGVLDDVYVIGDCA-VMET--DTTLPKTAQVAAQQASYL 424
Query: 183 FSLLNR-----IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
LN+ G GG + N A F +R+ G++ +G +KA+ +S+
Sbjct: 425 ARQLNKGTSTGAGDEGGKKKNKA--------FRFRNWGTLTYLGSWKAI------HQSQA 470
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L G+++W+VWR AYLT+ +SWRN+ V V W +++FGR ISR
Sbjct: 471 DELKGWVAWVVWRGAYLTKSMSWRNKVLVPVYWVVSWLFGRGISRF 516
>gi|453087191|gb|EMF15232.1| FAD/NAD(P)-binding domain-containing protein [Mycosphaerella
populorum SO2202]
Length = 559
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/320 (36%), Positives = 169/320 (52%), Gaps = 54/320 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
S EE+ RLLH VVVGGGPTGVEF+GEL DF D+++ ++D HVTL+EA +L S
Sbjct: 249 SPEERKRLLHMVVVGGGPTGVEFAGELQDFFENDLKKWIPEIQDNFHVTLVEALPNVLPS 308
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGTEV----PYGLLVWSTG 116
F L Y + + + + +VK V+ + + +G +V PYGLLVW+TG
Sbjct: 309 FSKSLIDYTEKTFEEETISIRTKTMVKKVEPEYIEAEYTNAEGKKVTEKIPYGLLVWATG 368
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+VK L +P R G ++E+L V ++V+AVGDC+ + + T A
Sbjct: 369 NALRPIVKDLMSQIPAQKDSRRGLAVNEYLVVKGTENVWAVGDCA--VANYAPT-----A 421
Query: 173 QVAERQGKYLFSLLNRIG-----------------KAGGGRANSA-----KDM------- 203
QVA ++G +L + N +G KA A + KDM
Sbjct: 422 QVASQEGFFLARMFNLMGKSEEIETKLKALSEEQEKAPNQEARNQVFEQIKDMQKRLRRV 481
Query: 204 -ELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRN 262
++G PF Y H GS+A IG KA+ D+ + + L+ G L++L WRSAYL+ S RN
Sbjct: 482 QQIG-PFEYSHQGSLAYIGSEKAVADI--SWLTGNLASGGQLTYLFWRSAYLSMCFSTRN 538
Query: 263 RFYVAVNWATTFVFGRDISR 282
R V V+W + +FGRD+SR
Sbjct: 539 RILVIVDWMKSSLFGRDVSR 558
>gi|317142154|ref|XP_001818887.2| NADH-ubiquinone oxidoreductase C3A11.07 [Aspergillus oryzae RIB40]
Length = 578
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 168/320 (52%), Gaps = 54/320 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+E+E RLLH VVVGGGPTGVEF+GE+ DF D+++ +K+ VTL+EA +L
Sbjct: 268 TEDEIKRLLHMVVVGGGPTGVEFAGEIQDFFEEDLKKWVPEIKENFKVTLVEALPNVLPM 327
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTG 116
F +L Y + + + + + +VK+V + ++ DGT+ +PYGLLVW+TG
Sbjct: 328 FSKQLIDYTESTFKEEAITIRTKTMVKNVTDKYIEAEVTKPDGTKELETIPYGLLVWATG 387
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L LP R G ++E+L V ++V+AVGDC+ T A
Sbjct: 388 NAVRPVVRDLMSQLPAQKNSRRGLAVNEYLVVNGAENVWAVGDCA-------ITNYAPTA 440
Query: 173 QVAERQGKYLFSLLNRIGKA------------GGGRANSAKD------------------ 202
QVA ++G +L L N + K +A S ++
Sbjct: 441 QVASQEGAFLARLFNTMAKTEAIEDDLKQLSEAQAQAKSPEERNQIFDEIRERQKQLRRT 500
Query: 203 MELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRN 262
++G PF Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ S RN
Sbjct: 501 KQIG-PFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTMTYLFWRSAYLSMCFSTRN 557
Query: 263 RFYVAVNWATTFVFGRDISR 282
R VAV+W +FGRD+SR
Sbjct: 558 RVLVAVDWVKAKMFGRDVSR 577
>gi|391874564|gb|EIT83429.1| NADH-dehydrogenase [Aspergillus oryzae 3.042]
Length = 578
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 168/320 (52%), Gaps = 54/320 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+E+E RLLH VVVGGGPTGVEF+GE+ DF D+++ +K+ VTL+EA +L
Sbjct: 268 TEDEIKRLLHMVVVGGGPTGVEFAGEIQDFFEEDLKKWVPEIKENFKVTLVEALPNVLPM 327
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTG 116
F +L Y + + + + + +VK+V + ++ DGT+ +PYGLLVW+TG
Sbjct: 328 FSKQLIDYTESTFKEEAITIRTKTMVKNVTDKYIEAEVTKPDGTKELETIPYGLLVWATG 387
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L LP R G ++E+L V ++V+AVGDC+ T A
Sbjct: 388 NAVRPVVRDLMSQLPAQKNSRRGLAVNEYLVVNGAENVWAVGDCA-------ITNYAPTA 440
Query: 173 QVAERQGKYLFSLLNRIGKA------------GGGRANSAKD------------------ 202
QVA ++G +L L N + K +A S ++
Sbjct: 441 QVASQEGAFLARLFNTMAKTEAIEDDLKQLSEAQAQAKSPEERNQIFDEIRERQKQLRRT 500
Query: 203 MELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRN 262
++G PF Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ S RN
Sbjct: 501 KQIG-PFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTMTYLFWRSAYLSMCFSTRN 557
Query: 263 RFYVAVNWATTFVFGRDISR 282
R VAV+W +FGRD+SR
Sbjct: 558 RVLVAVDWVKAKMFGRDVSR 577
>gi|83766745|dbj|BAE56885.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 567
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 168/320 (52%), Gaps = 54/320 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+E+E RLLH VVVGGGPTGVEF+GE+ DF D+++ +K+ VTL+EA +L
Sbjct: 257 TEDEIKRLLHMVVVGGGPTGVEFAGEIQDFFEEDLKKWVPEIKENFKVTLVEALPNVLPM 316
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTG 116
F +L Y + + + + + +VK+V + ++ DGT+ +PYGLLVW+TG
Sbjct: 317 FSKQLIDYTESTFKEEAITIRTKTMVKNVTDKYIEAEVTKPDGTKELETIPYGLLVWATG 376
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L LP R G ++E+L V ++V+AVGDC+ T A
Sbjct: 377 NAVRPVVRDLMSQLPAQKNSRRGLAVNEYLVVNGAENVWAVGDCAI-------TNYAPTA 429
Query: 173 QVAERQGKYLFSLLNRIGKA------------GGGRANSAKD------------------ 202
QVA ++G +L L N + K +A S ++
Sbjct: 430 QVASQEGAFLARLFNTMAKTEAIEDDLKQLSEAQAQAKSPEERNQIFDEIRERQKQLRRT 489
Query: 203 MELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRN 262
++G PF Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ S RN
Sbjct: 490 KQIG-PFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTMTYLFWRSAYLSMCFSTRN 546
Query: 263 RFYVAVNWATTFVFGRDISR 282
R VAV+W +FGRD+SR
Sbjct: 547 RVLVAVDWVKAKMFGRDVSR 566
>gi|448516358|ref|XP_003867549.1| Nde1 NADH dehydrogenase [Candida orthopsilosis Co 90-125]
gi|380351888|emb|CCG22112.1| Nde1 NADH dehydrogenase [Candida orthopsilosis]
Length = 570
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 159/309 (51%), Gaps = 44/309 (14%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
S+ E+ RLL VV GGGPTGVE +GE+ D+I +D+ + ++ + VTL+EA +L+S
Sbjct: 272 SDPERKRLLQIVVCGGGPTGVEAAGEIQDYIDQDLHKWVPELEGELKVTLVEALPNVLNS 331
Query: 66 FDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILN----DGT----EVPYGLLVWSTG 116
F+ +L Y + + L+ ++K V + L + DG+ E+PYG+L+W+TG
Sbjct: 332 FNKKLIDYTKEVFKDTNINLMTNTMIKKVGDKVLTASQKQPDGSTKTVEIPYGVLIWATG 391
Query: 117 VGP----STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
L+ +D K+ + +DE+L+V ++FA+GDC+ T P A
Sbjct: 392 NAARGFTRDLMSKIDEQKNAKRGLLVDEYLKVDGTSNIFALGDCTF-------TKYPPTA 444
Query: 173 QVAERQGKYLFSLLNRIGKA-------------------GGGRANSAKDMELGDPFVYRH 213
QVA ++G+YL ++ + G A + K++ F Y +
Sbjct: 445 QVAFQEGEYLAKYFEKLHQVENLQYQIEHPTPKQNVETLGKKLARAEKNLP---KFQYNY 501
Query: 214 LGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATT 273
GS+A IG KA+ DL S ++ G ++L WRSAY+ +S +N+ V ++W
Sbjct: 502 QGSLAYIGSEKAVADLVWGDWS-NITSGGNFTFLFWRSAYIYMCLSVKNQCLVILDWMKV 560
Query: 274 FVFGRDISR 282
+FGRD S+
Sbjct: 561 SLFGRDCSK 569
>gi|378726810|gb|EHY53269.1| NADH dehydrogenase [Exophiala dermatitidis NIH/UT8656]
Length = 589
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/316 (36%), Positives = 162/316 (51%), Gaps = 51/316 (16%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFD 67
EE RLLH VVVGGGPTGVEF+GEL DF D+ + +KD HVTL+EA +L F
Sbjct: 282 EEVKRLLHMVVVGGGPTGVEFAGELQDFFQEDLLKWVPQIKDDFHVTLVEALPNLLPMFS 341
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGT----EVPYGLLVWSTGVG 118
+L Y + + + + + +VK+V + ++ DGT ++PYGLLVW+TG
Sbjct: 342 KQLIEYTESSFKEEHIEIRTKTMVKNVTDKYIEAEVQQPDGTKQIEKIPYGLLVWATGNA 401
Query: 119 PSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
+VK L +P R G ++E+L V ++++AVGDC+ + + T AQV
Sbjct: 402 LRPVVKDLMSQIPAQAKARRGLEVNEYLVVNGTENIWAVGDCA--VANYAPT-----AQV 454
Query: 175 AERQGKYLFSLLNRIGKAGGGRAN----SAKD-MELGD---------------------- 207
A ++G +L L N + K A SAK GD
Sbjct: 455 AAQEGAFLARLFNTMAKTDAIEAELRELSAKQAAATGDERNAILNEIRERQRQLRRIKQI 514
Query: 208 -PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYV 266
PF Y H GS+A IG KA+ D+ S ++ G L++L W+SAYL+ S RNR V
Sbjct: 515 GPFQYSHQGSLAYIGAEKAVADVSWF--SGNIASGGTLTYLFWKSAYLSMCFSARNRILV 572
Query: 267 AVNWATTFVFGRDISR 282
A +W FGRD+SR
Sbjct: 573 AFDWTKAKFFGRDVSR 588
>gi|154312447|ref|XP_001555551.1| hypothetical protein BC1G_05826 [Botryotinia fuckeliana B05.10]
Length = 564
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 159/339 (46%), Gaps = 81/339 (23%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 69
+ +LL+ +VGGGPTGVEF+ EL D D+ Y + +I +T+ + A +IL FD
Sbjct: 241 RKQLLNFAIVGGGPTGVEFAAELFDLCHEDLSTLYPSLTPFIKITIYDVAPKILPMFDKN 300
Query: 70 LRHYATTQLSKSGVR---------LVRGIVKD----VDSQK---LILNDGTEVPYGLLVW 113
L +YA + G+ L RG+ K+ D +K L L + +V G+ VW
Sbjct: 301 LANYALEHFKRDGIEIKTEHHILGLQRGLPKEGENGEDGEKGFTLKLKEEGDVGVGMCVW 360
Query: 114 STGVGPSTLV-------------------------------KSLDLPKSPG-GRIGIDEW 141
STG+ + + + +L +SP G + +D +
Sbjct: 361 STGLMMNPFIEKALSSVHTFPTQSAILAGSDSENIAEKPESRKWELKRSPKTGGLMVDNF 420
Query: 142 LRV-----------------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
RV ++ DVFA+GD + G LPA AQVA ++ ++L
Sbjct: 421 FRVKLATRSSPDGAKQSQQEATMNDVFALGDVA----VLGDMGLPATAQVANQEARWLGK 476
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
LN++ KAG A K F +R++G M +G KA++ E KG +
Sbjct: 477 RLNKMEKAGNIGAAEDKG------FTFRNMGVMTYVGGMKAIMQTDGKGEIKGRT----- 525
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W++WR AYLT+ +SWRN+ + + WA ++FGRDISR
Sbjct: 526 AWVIWRGAYLTQTISWRNKILIPMYWAINWLFGRDISRF 564
>gi|255725752|ref|XP_002547805.1| hypothetical protein CTRG_02112 [Candida tropicalis MYA-3404]
gi|240135696|gb|EER35250.1| hypothetical protein CTRG_02112 [Candida tropicalis MYA-3404]
Length = 528
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 150/303 (49%), Gaps = 35/303 (11%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSS 65
++ E+ RLL +V GGGPTGVE +GE+ D+I +D+++ + + VTL+E+ +L +
Sbjct: 233 NDPERKRLLQVLVCGGGPTGVETAGEIQDYIDQDLKKWMPQIAKDMKVTLVESQPVVLHT 292
Query: 66 FDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDG----TEVPYGLLVWSTGVGP 119
F +L + + + L+ IV+ ++ I N T +PYG+L+W+TG
Sbjct: 293 FSPKLVDFTNHIFKDTNINLITNSRIVEVDNTHASIFNKKDHTTTPMPYGMLIWATGNST 352
Query: 120 STLVKSL--DLPKSPGGR-IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
V L +P+ R ++ L++ ++FA+GDC+ T PA AQVA
Sbjct: 353 RNFVSRLIETIPEQTNRRGFLVNGKLKLNGSSNIFALGDCT-------ITKYPATAQVAF 405
Query: 177 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDP-----------------FVYRHLGSMAT 219
+QG +L ++ K R D P FVY + GS+A
Sbjct: 406 QQGCFLAKYFGKLQKVESLRYKMQHDQSQQPPSEFSLKRLHKLEKALPEFVYNYRGSLAY 465
Query: 220 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
IG KA+ D+ S ++ G L++L WRSAY+ +S +N+ V +W ++FGRD
Sbjct: 466 IGSEKAVADVAVGSWS-NVAAGGNLTYLFWRSAYVMMCLSIKNQVLVCFDWIKVYLFGRD 524
Query: 280 ISR 282
SR
Sbjct: 525 CSR 527
>gi|425768231|gb|EKV06761.1| Alternative NADH-dehydrogenase [Penicillium digitatum Pd1]
gi|425770401|gb|EKV08874.1| Alternative NADH-dehydrogenase [Penicillium digitatum PHI26]
Length = 567
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 170/320 (53%), Gaps = 54/320 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+E+E RLLH VVVGGGPTGVEF+GEL DF D+++ +KD HVTL+EA +L
Sbjct: 257 TEDEVKRLLHMVVVGGGPTGVEFAGELKDFFNDDLKKWIPEIKDNFHVTLVEALPNVLPM 316
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTG 116
F +L Y + + + + + +VK V + ++ DG++ +PYGLLVW+TG
Sbjct: 317 FSKQLIEYTESTFKEEEISIRTKTMVKKVTDKYIQAEVTKPDGSKELETIPYGLLVWATG 376
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L +P R G ++E+L V ++V+AVGDC+ + + T A
Sbjct: 377 NAIRGVVRDLMSQIPAQAESRRGLAVNEYLVVNGTENVWAVGDCA--IANYAPT-----A 429
Query: 173 QVAERQGKYLFSLLNRIGKAGG---------GRANSAK---------------------D 202
QVA ++G +L L N + KA R + AK +
Sbjct: 430 QVASQEGAFLGRLFNTMAKAEALEQELEILSDRQSQAKGDEERNQIFDEIRERQKQLRRN 489
Query: 203 MELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRN 262
++G PF Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ S RN
Sbjct: 490 KQIG-PFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTMTYLFWRSAYLSMCFSTRN 546
Query: 263 RFYVAVNWATTFVFGRDISR 282
R V V+W +FGRD+SR
Sbjct: 547 RVLVCVDWVKARLFGRDVSR 566
>gi|340959699|gb|EGS20880.1| hypothetical protein CTHT_0027180 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 580
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 164/319 (51%), Gaps = 54/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
S EE RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L
Sbjct: 272 SPEEIDRLLHMVVVGGGPTGVEFAGELQDFFQEDIKKLVPEIADRFRVTLIEALPNVLPM 331
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTG 116
F +L Y + + + + +VK V+ + ++ DGT+ PYGLLVW+TG
Sbjct: 332 FSRQLIEYTERSFKEEKINIHTKTVVKKVNEKSVEAEVTRPDGTKETIVFPYGLLVWATG 391
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPA 170
+V+ L +P R G ++E+L V +D++A+GDC +GY +
Sbjct: 392 NAVRPVVRDLMSKIPAQKNSRRGLAVNEYLVVQGTRDIWAIGDCAVAGYAPT-------- 443
Query: 171 LAQVAERQGKYLFSLLNRIGKAGG-----GRANSAKDMELGD------------------ 207
AQVA ++G +L L N + K +S+ ++E G+
Sbjct: 444 -AQVAAQEGTFLARLFNNMAKTEALEEKIRHLSSSLNLEPGNSAEISQEIAELERKLRRI 502
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG KA+ D+ + ++ AG L++L WRSAY++ S RN+
Sbjct: 503 KDVKPFQYSHQGSLAYIGSEKAVADITWF--NGNVAAAGSLTFLFWRSAYVSMCFSMRNK 560
Query: 264 FYVAVNWATTFVFGRDISR 282
V +W + VFGRD+SR
Sbjct: 561 LLVINDWLKSKVFGRDLSR 579
>gi|358399441|gb|EHK48784.1| hypothetical protein TRIATDRAFT_290334 [Trichoderma atroviride IMI
206040]
Length = 547
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 165/319 (51%), Gaps = 54/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+ EE RL+H VVVGGGPTGVEF+GEL DF D+++ + VTLIEA +L
Sbjct: 239 TPEEVDRLMHMVVVGGGPTGVEFAGELQDFFEEDIKKLVPDISPRFKVTLIEALPNVLPM 298
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGT----EVPYGLLVWSTG 116
F L Y L + + + + +VK V + + DGT E+PYGLLVW+TG
Sbjct: 299 FSKTLIDYTENTLREEKIDIKTKTMVKRVTDKTVEAEVSRPDGTKERVEIPYGLLVWATG 358
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPA 170
+VK L +P R G ++E+L V +D++A+GDC +GY +
Sbjct: 359 NAVRPIVKDLASKIPAQKDSRRGLAVNEYLVVQGTRDIWAIGDCAVAGYAPT-------- 410
Query: 171 LAQVAERQGKYLFSLLNRIGK-----------------AGGGRANSAKDMELGD------ 207
AQVA ++G +L L N + K AGG A +++++EL +
Sbjct: 411 -AQVASQEGYFLGKLFNNMAKTENHEDRISELSGKLNIAGGNSAEASQEIELLERQLKKI 469
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG KA+ D+ + + L+ G +++L WRS YL+ S RNR
Sbjct: 470 RDIKPFKYSHQGSLAYIGSDKAVADV--SWWNGNLATGGSVTYLFWRSVYLSMCFSPRNR 527
Query: 264 FYVAVNWATTFVFGRDISR 282
V ++W + FGRD+SR
Sbjct: 528 VLVLLDWLKSKAFGRDVSR 546
>gi|326473639|gb|EGD97648.1| alternative NADH-dehydrogenase [Trichophyton tonsurans CBS 112818]
gi|326480766|gb|EGE04776.1| external NADH-ubiquinone oxidoreductase [Trichophyton equinum CBS
127.97]
Length = 597
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 167/319 (52%), Gaps = 52/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+++E RLLH VVVGGGPTGVEF+GEL DF D+++ +KD VTL+EA +L +
Sbjct: 287 TQDEIKRLLHMVVVGGGPTGVEFAGELQDFFNEDLKKWIPDIKDNFQVTLVEALPNVLPT 346
Query: 66 FDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGT----EVPYGLLVWSTG 116
F +L Y + + +++ G +VK+V + ++ DG+ ++PYGLLVW+TG
Sbjct: 347 FSKQLIDYTESTFKEEAIKIRTGTMVKNVTDKYIEAQVTKPDGSKEIEKIPYGLLVWATG 406
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L +P R G ++E+L V ++++AVGDC+ T A
Sbjct: 407 NAVRDVVRDLMNQIPAQKKSRRGLAVNEYLVVNGTENIWAVGDCA-------ITNYAPTA 459
Query: 173 QVAERQGKYLFSLLNRIGKAG---------GGRANSAKD--------------------M 203
QVA ++G +L L N + K + AKD M
Sbjct: 460 QVASQEGAFLARLFNTMAKTDQIEKELSHLSVAQSEAKDDSDRNKILDEIRALQQQMRRM 519
Query: 204 ELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
+ PF Y H GS+A IG+ +A+ D+ + S ++ G L++L WRSAYL+ S RNR
Sbjct: 520 KQVGPFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTLTYLFWRSAYLSMCFSTRNR 577
Query: 264 FYVAVNWATTFVFGRDISR 282
V V+W +FGRD+SR
Sbjct: 578 VLVVVDWLKAKLFGRDVSR 596
>gi|126275277|ref|XP_001386827.1| NADH dehydrogenase [Scheffersomyces stipitis CBS 6054]
gi|126212696|gb|EAZ62804.1| NADH dehydrogenase [Scheffersomyces stipitis CBS 6054]
Length = 557
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 156/305 (51%), Gaps = 38/305 (12%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E+ RLL VV GGGPTGVE +GEL D+I +D+++ V D + VTL+EA +L+ F
Sbjct: 260 DSERKRLLSIVVCGGGPTGVEVAGELQDYIDQDLKKWMPEVADELKVTLVEALPNVLNMF 319
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL----ILNDGT----EVPYGLLVWSTGV 117
+ +L Y +++ + L +VK V + + L DG+ E+PYGLL+W+TG
Sbjct: 320 NAKLVEYTKEVFAETNIILRTNTMVKKVSDKNVHASHKLKDGSTESVEIPYGLLIWATGN 379
Query: 118 GPSTLVKSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
P + + L D K+ + +DE + + ++FA+GDC+ T AQ
Sbjct: 380 APRDITRDLISKVDEQKNARRGLLVDERMLLDGTDNIFALGDCTF-------TKYAPTAQ 432
Query: 174 VAERQGKYL---FSLLNRIGKAGGGRANSAK------------DMELGDP-FVYRHLGSM 217
VA ++G +L F+ L+ + AN +E P F Y H GS+
Sbjct: 433 VAFQEGIFLAKHFAKLHELESLKYTLANPKPTDNTDRLTKKLTKLEQKLPVFQYNHQGSL 492
Query: 218 ATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFG 277
A IG +A+ DL S ++ G ++L WRSAY+ +S +N+ V +W +FG
Sbjct: 493 AYIGSERAVADLVWGDWS-NITSGGSFTYLFWRSAYIYMCLSVKNQILVCFDWVKVSLFG 551
Query: 278 RDISR 282
RD S+
Sbjct: 552 RDCSK 556
>gi|315052876|ref|XP_003175812.1| external NADH-ubiquinone oxidoreductase 1 [Arthroderma gypseum CBS
118893]
gi|311341127|gb|EFR00330.1| external NADH-ubiquinone oxidoreductase 1 [Arthroderma gypseum CBS
118893]
Length = 602
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 167/319 (52%), Gaps = 52/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+++E RLLH VVVGGGPTGVEF+GEL DF D+R+ +KD VTL+EA +L +
Sbjct: 292 TQDEIKRLLHMVVVGGGPTGVEFAGELQDFFNEDLRKWVPDIKDNFQVTLVEALPNVLPT 351
Query: 66 FDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGT----EVPYGLLVWSTG 116
F +L Y + + +++ G +VK+V + ++ DG+ ++PYGLLVW+TG
Sbjct: 352 FSKQLIDYTESTFKEEAIKIRTGTMVKNVTDKYIEAQVTKPDGSKEIEKIPYGLLVWATG 411
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L +P R G ++E+L V ++++AVGDC+ T A
Sbjct: 412 NAVRDVVRDLMGQIPAQKKSRRGLAVNEYLVVNGTENIWAVGDCA-------ITNYAPTA 464
Query: 173 QVAERQGKYLFSLLNRIGK-------------AGGGRANSAKDMELGD------------ 207
QVA ++G +L L N + K A + A ++ D
Sbjct: 465 QVASQEGAFLARLFNTMAKTDQIEQELSHLSVAQSEAKDDADRNKILDEIRALQQQMRRI 524
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG+ +A+ D+ + S ++ G L++L WRSAYL+ S RNR
Sbjct: 525 KQVGPFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTLTYLFWRSAYLSMCFSTRNR 582
Query: 264 FYVAVNWATTFVFGRDISR 282
V V+W +FGRD+SR
Sbjct: 583 VLVVVDWLKAKLFGRDVSR 601
>gi|115491705|ref|XP_001210480.1| hypothetical protein ATEG_00394 [Aspergillus terreus NIH2624]
gi|114197340|gb|EAU39040.1| hypothetical protein ATEG_00394 [Aspergillus terreus NIH2624]
Length = 576
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 165/319 (51%), Gaps = 52/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+E+E RLLH VVVGGGPTGVEF+GEL DF D+++ ++ + VTL+EA +L
Sbjct: 266 TEDEVKRLLHMVVVGGGPTGVEFAGELQDFFEEDLKKWIPDIQKHFKVTLVEALPNVLPM 325
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGT----EVPYGLLVWSTG 116
F +L Y + + + + + +VK+V + ++ DGT ++PYGLLVW+TG
Sbjct: 326 FSKQLIDYTESTFKEEAISIRAKTMVKNVTDKYIEAEVTKPDGTKELEKIPYGLLVWATG 385
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L LP R G ++E+L V ++V+AVGDC+ T A
Sbjct: 386 NAVRGVVRDLMNQLPAQKNSRRGLAVNEYLVVNGTENVWAVGDCA-------ITNYAPTA 438
Query: 173 QVAERQGKYLFSLLNRIGKAGG----------GRANSAKDMELGD--------------- 207
QVA ++G +L L N + K ++ + D E
Sbjct: 439 QVASQEGAFLARLFNTMAKTEAIENELKALSVAQSQAKSDEERNKVFDEIRDLQKQLRRT 498
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ S RNR
Sbjct: 499 KQIGPFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTMTYLFWRSAYLSMCFSTRNR 556
Query: 264 FYVAVNWATTFVFGRDISR 282
VAV+W +FGRD+SR
Sbjct: 557 VLVAVDWIKAKLFGRDVSR 575
>gi|367027384|ref|XP_003662976.1| hypothetical protein MYCTH_2304268 [Myceliophthora thermophila ATCC
42464]
gi|347010245|gb|AEO57731.1| hypothetical protein MYCTH_2304268 [Myceliophthora thermophila ATCC
42464]
Length = 523
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 165/335 (49%), Gaps = 76/335 (22%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
+S+++K +LLH +VGGGPTG+EF+ EL D I D+ Y + + +T+ + A ++L
Sbjct: 208 LSDDDKRQLLHFAIVGGGPTGIEFAAELHDLIRDDLAPIYPELAPLVSITVYDVAPKVLP 267
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGT------------------EV 106
FD L YA S+ ++ + + ++L L DG EV
Sbjct: 268 MFDRALAKYAMDTFSRQNIK----VKTEHHLERLRLADGELGRRRGVLKIKIKEYGDEEV 323
Query: 107 PYGLLVWSTGVGPSTLV-----KSLDLP------KSPG-----------GRIGIDEWLRV 144
GL+VWSTG+ P+ L+ K L LP SP G I D +LR
Sbjct: 324 GAGLVVWSTGLMPNPLIAKLAAKRLPLPGANPLSTSPPTTRHLLRDARTGGILTDAYLRA 383
Query: 145 PS----------------VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 188
+ ++DV+ +GDC+ +E+ LP AQVA +Q YL LNR
Sbjct: 384 RTTTSTSEPGSAPEPDGVLEDVYVIGDCA-VMEN--DRTLPKTAQVASQQATYLAKALNR 440
Query: 189 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 248
AGGG K PF +R+ G++ +G +KA+ +S+ L G+++W+V
Sbjct: 441 AAAAGGGGGAEDK------PFRFRNWGTLTYLGSWKAI------HQSQADELKGWVAWVV 488
Query: 249 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
WR AYLT+ +SWRN+ V + W +++FGR ISR
Sbjct: 489 WRGAYLTKSMSWRNKLLVPIYWVVSWIFGRGISRF 523
>gi|327299766|ref|XP_003234576.1| alternative NADH-dehydrogenase [Trichophyton rubrum CBS 118892]
gi|326463470|gb|EGD88923.1| alternative NADH-dehydrogenase [Trichophyton rubrum CBS 118892]
Length = 607
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 167/319 (52%), Gaps = 52/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+++E RLLH VVVGGGPTGVEF+GEL DF D+++ +KD VTL+EA +L +
Sbjct: 297 TQDEIKRLLHMVVVGGGPTGVEFAGELQDFFNEDLKKWIPDIKDNFQVTLVEALPNVLPT 356
Query: 66 FDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGTE----VPYGLLVWSTG 116
F +L Y + + +++ G +VK+V + ++ DG++ +PYGLLVW+TG
Sbjct: 357 FSKQLIDYTESTFKEEAIKIRTGTMVKNVTDKYIEAQVTKPDGSKEIERIPYGLLVWATG 416
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L +P R G ++E+L V ++++AVGDC+ T A
Sbjct: 417 NAVRDVVRDLMNQIPAQKKSRRGLAVNEYLVVNGTENIWAVGDCA-------ITNYAPTA 469
Query: 173 QVAERQGKYLFSLLNRIGKAG---------GGRANSAKD--------------------M 203
QVA ++G +L L N + K + AKD M
Sbjct: 470 QVASQEGAFLARLFNTMAKTDQIEKELSHLSVAQSEAKDDSDRNKILDEIRALQQQMRRM 529
Query: 204 ELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
+ PF Y H GS+A IG+ +A+ D+ + S ++ G L++L WRSAYL+ S RNR
Sbjct: 530 KQVGPFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTLTYLFWRSAYLSMCFSTRNR 587
Query: 264 FYVAVNWATTFVFGRDISR 282
V V+W +FGRD+SR
Sbjct: 588 VLVVVDWLKAKLFGRDVSR 606
>gi|408821867|ref|ZP_11206757.1| pyridine nucleotide-disulfide oxidoreductase [Pseudomonas
geniculata N1]
Length = 426
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 142/268 (52%), Gaps = 21/268 (7%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFD 67
+K+ L VVGGGPTGVE +G L++ +R + H+ V L+EA +LSSF
Sbjct: 155 KKAAWLSFAVVGGGPTGVELAGTLAEIARHTLRNEFRHIDPASAKVRLVEAGPRVLSSFP 214
Query: 68 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
+ L A QL K GV ++ G V D+DSQ L D VP +VW+ GV S L ++L
Sbjct: 215 EVLSLKARRQLEKLGVEVLTGTPVSDIDSQGFTLGD-EFVPARTVVWAAGVAASPLARTL 273
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
++P GR+ + L + ++F GD + ++ GK V P +A A++ GKY+ ++
Sbjct: 274 EVPLDRAGRVQVQPDLTLSGHPELFVAGDLAVLNQANGKPV-PGVAPAAKQMGKYVAEVI 332
Query: 187 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
RA E G PF Y G++ATIGR A+V L + L L+G L+W
Sbjct: 333 ---------RARLHGKPEPG-PFKYADFGNLATIGRMAAIVHLGR------LQLSGVLAW 376
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTF 274
W +A++ ++ +RNR V +NWA +
Sbjct: 377 WFWLAAHVFFLIGFRNRIVVLLNWAVAY 404
>gi|449299789|gb|EMC95802.1| hypothetical protein BAUCODRAFT_34570 [Baudoinia compniacensis UAMH
10762]
Length = 533
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 164/338 (48%), Gaps = 88/338 (26%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 69
K +LL+ +VGGGPTG+EFSGEL D D+ + Y + +++ +T+ + A++IL FD++
Sbjct: 219 KKQLLNFAIVGGGPTGIEFSGELKDIFEDDMSRLYPQLAEHVKITVYDVADKILPMFDEK 278
Query: 70 LRHYATTQLSKS--------------GVRLVRGIVKDVDSQK-----LILNDG--TEVPY 108
L YA ++K G + G+ D K L L +G +EV
Sbjct: 279 LAGYALEHIAKGVTVKTSHRIKELRRGFPNIEGVGDFHDDVKASGFTLSLENGHQSEVGC 338
Query: 109 GLLVWSTGV---------------GPSTLVKSL----DLPKSPG----------GRIGID 139
G +VWSTG+ P++ V+ L D P+S G I D
Sbjct: 339 GFVVWSTGLMSNPFVAKALSSSFTAPASCVRLLSNIDDSPESSADWEVQKHPRTGSIVTD 398
Query: 140 EWLRV------------PS--VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
++LRV P+ ++DVFA+GDC+ T P+ AQVA ++ K+L
Sbjct: 399 DYLRVQLGSSASHSEPQPAAILRDVFALGDCA----VIDGTQYPSTAQVAAQKAKWLAKK 454
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
LN+ G N+ F + G MA IGR A+V + KG SL+G +
Sbjct: 455 LNK------GDINTQG-------FSFMSQGIMAYIGRMNAIVQM-----DKG-SLSGRAA 495
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W++WR AYL + +SWRNR + + W ++FGRDISR
Sbjct: 496 WMMWRGAYLVKSISWRNRLLIPMYWTINWIFGRDISRF 533
>gi|154286926|ref|XP_001544258.1| hypothetical protein HCAG_01305 [Ajellomyces capsulatus NAm1]
gi|150407899|gb|EDN03440.1| hypothetical protein HCAG_01305 [Ajellomyces capsulatus NAm1]
Length = 651
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 164/319 (51%), Gaps = 52/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
++EE RLLH VVVGGGPTGVEF+GEL DF D+R+ +KD VTL+EA +L +
Sbjct: 341 TKEEVERLLHMVVVGGGPTGVEFAGELQDFFNDDLRKWVPEIKDSFKVTLVEALPNVLPT 400
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTG 116
F +L Y + + + + + +VK V + ++ DGT+ +PYGLLVW+TG
Sbjct: 401 FSKQLIDYTESTFQEEAITIRTKTMVKKVSDKYIEAEVTKPDGTKELETIPYGLLVWATG 460
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L +P R G ++E+L V ++++AVGDC+ T A
Sbjct: 461 NAVRGVVRDLMSQIPAQSKSRRGLAVNEYLVVNGTENIWAVGDCA-------VTNYAPTA 513
Query: 173 QVAERQGKYLFSLLNRIGKAGG----------GRANSAKDMELGD--------------- 207
QVA ++G +L L N + K +A++ D E
Sbjct: 514 QVASQEGSFLARLFNSMAKTEAIEAELKELSTAQASAPSDEERNKILDRIRALQKSLRRT 573
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG+ +A+ D+ + S ++ G L++L WRS YL+ S RNR
Sbjct: 574 KQLGPFQYSHQGSLAYIGKERAVADV--SWLSGNIASGGTLTYLFWRSVYLSMCFSTRNR 631
Query: 264 FYVAVNWATTFVFGRDISR 282
VA +W +FGRD+SR
Sbjct: 632 VLVAFDWLKAKMFGRDVSR 650
>gi|302654255|ref|XP_003018936.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Trichophyton verrucosum HKI 0517]
gi|291182624|gb|EFE38291.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Trichophyton verrucosum HKI 0517]
Length = 565
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 168/319 (52%), Gaps = 52/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+++E RLLH VVVGGGPTGVEF+GEL DF D+++ +KD VTL+EA +L +
Sbjct: 255 TQDEIKRLLHMVVVGGGPTGVEFAGELQDFFNEDLKKWIPDIKDNFQVTLVEALPNVLPT 314
Query: 66 FDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGT----EVPYGLLVWSTG 116
F +L Y + + +++ G +VK+V + ++ DG+ ++PYGLLVW+TG
Sbjct: 315 FSKQLIDYTESTFKEEAIKIRTGTMVKNVTDKYIEAQVTKPDGSKEIEKIPYGLLVWATG 374
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L +P R G ++E+L V ++++AVGDC+ T A
Sbjct: 375 NAVRDVVRDLMNQIPAQKKSRRGLAVNEYLVVNGTENIWAVGDCA-------ITNYAPTA 427
Query: 173 QVAERQGKYLFSLLNRIGKA--------------GGGRANSAKDMELGD----------- 207
QVA ++G +L L N + K + +S ++ L +
Sbjct: 428 QVASQEGAFLARLFNTMAKTDQIEKELSHLSVAQSEAKDDSDRNKILDEIRALQQQMRRI 487
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG+ +A+ D+ + S ++ G L++L WRSAYL+ S RNR
Sbjct: 488 KQVGPFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTLTYLFWRSAYLSMCFSTRNR 545
Query: 264 FYVAVNWATTFVFGRDISR 282
V V+W +FGRD+SR
Sbjct: 546 VLVVVDWLKAKLFGRDVSR 564
>gi|296815778|ref|XP_002848226.1| alternative NADH-dehydrogenase [Arthroderma otae CBS 113480]
gi|238841251|gb|EEQ30913.1| alternative NADH-dehydrogenase [Arthroderma otae CBS 113480]
Length = 586
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 164/319 (51%), Gaps = 52/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+++E RLLH VVVGGGPTGVEF+GEL DF D+R+ +KD HVTL+EA +L
Sbjct: 276 TQDEIKRLLHMVVVGGGPTGVEFAGELQDFFNEDLRKWIPDIKDSFHVTLVEALPNVLPM 335
Query: 66 FDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGT----EVPYGLLVWSTG 116
F +L Y + + + + G +VK V + ++ DG+ ++PYGLLVW+TG
Sbjct: 336 FSKQLIDYTESTFKEEAITIRTGTMVKSVTDKYIEAQVTKPDGSKEIEKIPYGLLVWATG 395
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L +P R G ++E+L V ++++AVGDC+ T A
Sbjct: 396 NAVRDVVRDLMNQIPAQKKSRRGLAVNEYLVVNGTENIWAVGDCA-------ITNYAPTA 448
Query: 173 QVAERQGKYLFSLLNRIGKAGG----------GRANSAKDMELGD--------------- 207
QVA ++G +L L N + K ++ + D +
Sbjct: 449 QVASQEGAFLARLFNTMAKTDNIEKELSQLSVAQSEAKDDTDRNKVLDEIRALQQQLRRT 508
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG+ +A+ D+ + S ++ G L++L WRSAYL+ S RNR
Sbjct: 509 RQVGPFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTLTYLFWRSAYLSMCFSTRNR 566
Query: 264 FYVAVNWATTFVFGRDISR 282
V V+W +FGRD+SR
Sbjct: 567 VLVVVDWLKAKLFGRDVSR 585
>gi|225555376|gb|EEH03668.1| alternative NADH-dehydrogenase [Ajellomyces capsulatus G186AR]
Length = 586
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 165/319 (51%), Gaps = 52/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
++EE RLLH VVVGGGPTGVEF+GEL DF D+++ +KD VTL+EA +L +
Sbjct: 276 TKEEVERLLHMVVVGGGPTGVEFAGELQDFFNDDLKKWVPEIKDSFKVTLVEALPNVLPT 335
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTG 116
F +L Y + + + + + +VK V + ++ DGT+ +PYGLLVW+TG
Sbjct: 336 FSKQLIDYTESTFQEEAITIRTKTMVKKVSDKYIEAEVTKPDGTKELETIPYGLLVWATG 395
Query: 117 VGPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L +P R + ++E+L V ++++AVGDC+ T A
Sbjct: 396 NAVRGVVRDLMSQIPAQSKSRRGLAVNEYLVVNGTENIWAVGDCA-------VTNYAPTA 448
Query: 173 QVAERQGKYLFSLLNRIGKAGG----------GRANSAKDMELGD--------------- 207
QVA ++G +L L N + K +A+++ D E
Sbjct: 449 QVASQEGSFLARLFNSMAKTEAIEAELKELSTAQASASSDEERNKILDQIRALQKSLRRT 508
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG+ +A+ D+ + S ++ G L++L WRS YL+ S RNR
Sbjct: 509 KQLGPFQYSHQGSLAYIGKERAVADV--SWLSGNIASGGTLTYLFWRSVYLSMCFSTRNR 566
Query: 264 FYVAVNWATTFVFGRDISR 282
VA +W +FGRD+SR
Sbjct: 567 VLVAFDWLKAKMFGRDVSR 585
>gi|452845458|gb|EME47391.1| hypothetical protein DOTSEDRAFT_122942 [Dothistroma septosporum
NZE10]
Length = 583
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 158/317 (49%), Gaps = 52/317 (16%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFD 67
EEK RLLH VVVGGGPTGVEF+GEL DF D+++ + HVTL+EA +L SF
Sbjct: 275 EEKKRLLHMVVVGGGPTGVEFAGELQDFFEHDLKKWIPEIAGDFHVTLVEALPSVLPSFS 334
Query: 68 DRLRHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGTE----VPYGLLVWSTGVG 118
L Y + + +V+ + D + DG + +PYGLLVW+TG
Sbjct: 335 KNLIDYTEKTFKEETIDIRTKTMVKNVTSDYIEAEFTGPDGKKQIEKIPYGLLVWATGNA 394
Query: 119 PSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
+VK L +P R G ++E+L V ++++AVGDC+ + + T AQV
Sbjct: 395 VRPVVKDLMNQIPAQKDARRGLNVNEYLVVKGAENIWAVGDCA--VANYAPT-----AQV 447
Query: 175 AERQGKYLFSLLNRIGK-----------------AGGGRANSAKDMELGD---------- 207
A ++G +L L N++ K A A E+ D
Sbjct: 448 ASQEGAFLARLFNQMAKTEEIEVQLAVLSEEQAKAANKEARDHVFSEIKDLQKRLRRVKQ 507
Query: 208 --PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFY 265
PF Y H GSMA IG KA+ D+ + + L+ G L++ W+SAYL+ S RNR
Sbjct: 508 MGPFEYSHQGSMAYIGSEKAVADI--SWLTGNLASGGQLTYFFWKSAYLSMCFSTRNRVL 565
Query: 266 VAVNWATTFVFGRDISR 282
V ++W ++ FGRD+SR
Sbjct: 566 VFMDWIKSYCFGRDVSR 582
>gi|302496829|ref|XP_003010415.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Arthroderma benhamiae CBS 112371]
gi|291173958|gb|EFE29775.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Arthroderma benhamiae CBS 112371]
Length = 609
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 168/319 (52%), Gaps = 52/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+++E RLLH VVVGGGPTGVEF+GEL DF D+++ +KD VTL+EA +L +
Sbjct: 299 TQDEIKRLLHMVVVGGGPTGVEFAGELQDFFNEDLKKWIPDIKDNFQVTLVEALPNVLPT 358
Query: 66 FDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGT----EVPYGLLVWSTG 116
F +L Y + + +++ G +VK+V + ++ DG+ ++PYGLLVW+TG
Sbjct: 359 FSKQLIDYTESTFKEEAIKIRTGTMVKNVTDKYIEAQVTKPDGSKEIEKIPYGLLVWATG 418
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L +P R G ++E+L V ++++AVGDC+ T A
Sbjct: 419 NAVRDVVRDLMNQIPAQKKSRRGLAVNEYLVVNGTENIWAVGDCA-------ITNYAPTA 471
Query: 173 QVAERQGKYLFSLLNRIGKA--------------GGGRANSAKDMELGD----------- 207
QVA ++G +L L N + K + +S ++ L +
Sbjct: 472 QVASQEGAFLARLFNTMAKTDQIEKELSHLSVAQSEAKDDSDRNKILDEIRALQQQMRRI 531
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG+ +A+ D+ + S ++ G L++L WRSAYL+ S RNR
Sbjct: 532 KQVGPFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTLTYLFWRSAYLSMCFSTRNR 589
Query: 264 FYVAVNWATTFVFGRDISR 282
V V+W +FGRD+SR
Sbjct: 590 VLVVVDWLKAKLFGRDVSR 608
>gi|156058358|ref|XP_001595102.1| hypothetical protein SS1G_03190 [Sclerotinia sclerotiorum 1980]
gi|154700978|gb|EDO00717.1| hypothetical protein SS1G_03190 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 571
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/319 (36%), Positives = 162/319 (50%), Gaps = 54/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
S EE RLLH VVVGGGPTGVEF+GEL DF +D+++ + D VTLIEA +L
Sbjct: 263 SPEEVERLLHMVVVGGGPTGVEFAGELQDFFDQDIKKWVPEISDKFKVTLIEALPNVLPM 322
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DG---TEV-PYGLLVWSTG 116
F +L Y + + + + + VK V + + DG TEV PYGLLVW+TG
Sbjct: 323 FSKQLIEYTESTFKEEKITIKTKTAVKKVTDKTVEAEATGPDGKKFTEVMPYGLLVWATG 382
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPA 170
+VK L +P R G ++E+L V +D++A GDC +GY +
Sbjct: 383 NAVRPVVKDLMAQIPAQKDSRRGLAVNEYLVVQGTKDIWATGDCAVAGYAPT-------- 434
Query: 171 LAQVAERQGKYLFSLLNRIGKAG-----------------GGRANSAKDMELGD------ 207
AQVA ++G +L L N + K G A AK++E +
Sbjct: 435 -AQVASQEGAFLARLFNTMAKTDTIEHEIQELSSSLNLGPGNAAEIAKEIEAHEKQLRRI 493
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG +A+ D+ + + + G L++L WRSAYL+ S RNR
Sbjct: 494 KDIKPFHYTHQGSLAYIGSERAVADV--SWLNGNFATGGNLTYLFWRSAYLSMCFSTRNR 551
Query: 264 FYVAVNWATTFVFGRDISR 282
V ++W + FGRD+SR
Sbjct: 552 VLVVLDWLKSKTFGRDVSR 570
>gi|325094691|gb|EGC48001.1| alternative NADH-dehydrogenase [Ajellomyces capsulatus H88]
Length = 586
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 164/319 (51%), Gaps = 52/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
++EE RLLH VVVGGGPTGVEF+GEL DF D+++ +KD VTL+EA +L +
Sbjct: 276 TKEEVERLLHMVVVGGGPTGVEFAGELQDFFNDDLKKWVPEIKDSFKVTLVEALPNVLPT 335
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTG 116
F +L Y + + + + + +VK V + ++ DGT+ +PYGLLVW+TG
Sbjct: 336 FSKQLIDYTESTFQEEAITIRTKTMVKKVSDKYIEAEVTKPDGTKELETIPYGLLVWATG 395
Query: 117 VGPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L +P R + ++E+L V ++++AVGDC+ T A
Sbjct: 396 NAVRGVVRDLMSQIPAQSKSRRGLAVNEYLVVNGTENIWAVGDCA-------VTNYAPTA 448
Query: 173 QVAERQGKYLFSLLNRIGKAGG----------GRANSAKDMELGD--------------- 207
QVA ++G +L L N + K +A++ D E
Sbjct: 449 QVASQEGSFLARLFNSMAKTEAIEAELKELSTAQASAPSDEERNKILDQIRSLQKSLRRT 508
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG+ +A+ D+ + S ++ G L++L WRS YL+ S RNR
Sbjct: 509 KQLGPFQYSHQGSLAYIGKERAVADV--SWLSGNIASGGTLTYLFWRSVYLSMCFSTRNR 566
Query: 264 FYVAVNWATTFVFGRDISR 282
VA +W +FGRD+SR
Sbjct: 567 VLVAFDWLKAKMFGRDVSR 585
>gi|170116640|ref|XP_001889510.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164635512|gb|EDQ99818.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 566
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/319 (35%), Positives = 163/319 (51%), Gaps = 48/319 (15%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
G + EE RLLH VVVGGGPTGVE SGEL DF+ D++ Y + I +TL+EA
Sbjct: 256 FPGQATEEVDRLLHMVVVGGGPTGVELSGELHDFLEDDLKSWYPELAGKIRITLVEALPS 315
Query: 62 ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN--DGT--EVPYGLLVWSTG 116
+L SF +L +Y + +S + L + +VK+V + ++L D + E+P G++VW+ G
Sbjct: 316 VLPSFSKQLINYTESTFKESKIDILTKTMVKEVKEKSVVLQMPDKSIQEMPCGMVVWAAG 375
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPAL 171
L + L LP + R G +D++LR+ QD +FA+GDC+ T
Sbjct: 376 NKGRKLTQDLMAKLPTTQTNRRGLLVDDYLRMQGAQDSIFAIGDCTA-------TSYAPT 428
Query: 172 AQVAERQGKYLFSLLNRIGKAGG-----GRANSAKDMELGD------------------- 207
AQVA +QG YL +L + K + S+ D G+
Sbjct: 429 AQVASQQGAYLARVLGSLAKKENLKNMLHQLESSIDQVKGEEEKKAAVAEIESVRNQSAK 488
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG KA+ DL + ++ G ++L WRSAYL+ + S RNR
Sbjct: 489 IKLRPFHYSHQGSLAYIGSEKAIADL--PFMNGNIASGGVATYLFWRSAYLSTLFSLRNR 546
Query: 264 FYVAVNWATTFVFGRDISR 282
V +W +FGRD+SR
Sbjct: 547 TLVGTDWVKVKLFGRDVSR 565
>gi|397618258|gb|EJK64817.1| hypothetical protein THAOC_14406 [Thalassiosira oceanica]
Length = 969
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 160/319 (50%), Gaps = 44/319 (13%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMR---DVRQRYSHVKDYIHVTLIEA-NEI 62
+ EE+ R +H +VGGGPTGVE +GEL DF + Y H++D + VTLI++ E+
Sbjct: 653 ASEERRRRVHIAIVGGGPTGVELAGELMDFFQQVCGSPDGAYKHLRDDVSVTLIQSGTEL 712
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILND---GTE--VPYGLLVWSTG 116
+ + D LR A L + GVR++ +++V +++ + G E +P GL VW+ G
Sbjct: 713 VPAMDKELRARARQSLEEQGVRVIFNTRLQEVGQDYVVVKEKGSGAEETIPVGLTVWAAG 772
Query: 117 VGPSTLVKSL--DLPKSP---GGRIGIDEWLRVPSVQ-----DVFAVGDCSGYLESTGK- 165
P VK L LP GR+ +D+WLR P+ + +GD + L K
Sbjct: 773 NAPVPFVKELLSQLPPEATGSAGRVNVDDWLRCPTPTPETFGSILVLGDVA-CLNGRDKY 831
Query: 166 ----TVLPALAQVAERQGKYLFSLLN----------RIGKAGGGRANS-------AKDME 204
LP AQVA +QG + LLN R+ + G A S A+ +E
Sbjct: 832 KPEPEPLPQTAQVAGQQGSFAARLLNRGYEMDATPPRLPELSSGEAFSLLRTWLVARGLE 891
Query: 205 LGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRF 264
F + LG +A IG+ +AL + + +G +++ +WR+ YL++ S RN+
Sbjct: 892 EAQGFRFLSLGLLAYIGQEEALNQVMLGNVPL-FNYSGKVAFALWRTVYLSKQASTRNQA 950
Query: 265 YVAVNWATTFVFGRDISRI 283
+A +W T FGRDI+R+
Sbjct: 951 LIAFDWLRTEAFGRDITRL 969
>gi|380494412|emb|CCF33169.1| hypothetical protein CH063_05416 [Colletotrichum higginsianum]
Length = 583
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/319 (35%), Positives = 162/319 (50%), Gaps = 54/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
S E+ SRL+H VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L S
Sbjct: 275 SAEDVSRLMHMVVVGGGPTGVEFAGELQDFFEEDIKRLVPEIADRFKVTLIEALPNVLPS 334
Query: 66 FDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGTE----VPYGLLVWSTG 116
F +L Y + + L + +VK+V + DG + +PYGLLVW+TG
Sbjct: 335 FSKQLIEYTEKTFKEEKIDILTKTMVKNVTDTHVQAEATGPDGKKQTLIIPYGLLVWATG 394
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPA 170
+++ L +P R G ++E+L V +D++A+GDC +GY +
Sbjct: 395 NAVRPIIRDLISKIPAQKDSRRGLAVNEYLVVQGTRDIWAIGDCAVAGYAPT-------- 446
Query: 171 LAQVAERQGKYLFSLLNRIGKAGGGRA---NSAKDMELG--------------------- 206
AQVA ++G +L L N + + A +KD+ L
Sbjct: 447 -AQVAAQEGSFLARLFNNMARTETVEARIQELSKDLNLKPGNAAEAAKEIEAHERQLRRI 505
Query: 207 ---DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GSMA IG KA+ D+ + + ++ G +++L WRSAYL+ S RNR
Sbjct: 506 KDIKPFHYSHQGSMAYIGSEKAVADV--SWWNGNIASGGSMTYLFWRSAYLSMCFSTRNR 563
Query: 264 FYVAVNWATTFVFGRDISR 282
V +W + VFGRDISR
Sbjct: 564 LLVVNDWLKSKVFGRDISR 582
>gi|121701091|ref|XP_001268810.1| pyridine nucleotide-disulphide oxidoreductase, putative
[Aspergillus clavatus NRRL 1]
gi|119396953|gb|EAW07384.1| pyridine nucleotide-disulphide oxidoreductase, putative
[Aspergillus clavatus NRRL 1]
Length = 569
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 155/342 (45%), Gaps = 78/342 (22%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L + E + +LLH +VG GPTG E + L DFI RD+ Y + +TL + A
Sbjct: 243 LPTTTREMRDQLLHFAIVGAGPTGTELAASLRDFIYRDMITLYPQLHGVPRITLYDVAPT 302
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRG--------------IVKDVDSQK---LILNDGT 104
+LS FD+ L YA + K G+ + ++D ++ L +
Sbjct: 303 VLSMFDETLSQYAMETMQKEGIAIKTSHHVESLRWGPPGAQPPYEMDPKRCLTLKTKEEG 362
Query: 105 EVPYGLLVWSTG----------------VGPSTLVKSLDLPKSP---------------G 133
EV G+ VW TG + S +VK D +P
Sbjct: 363 EVGVGMCVWVTGNAMNKFVRNALQDVKALPASAVVKDADTNTNPSNSDSSNAWHVKKAKN 422
Query: 134 GRIGIDEWLRV---------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
G + +D LRV +QDVFA+GD S + TG PA AQ ++ K+L
Sbjct: 423 GALLVDGQLRVQLQSDDGRTAVLQDVFALGDNS--MPETGAP--PATAQATFQEAKWLAM 478
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL--RQNKESKGLS--L 240
LN+ D++ PF +R+LG++A +G +AL+ L K+SK L L
Sbjct: 479 HLNQ------------GDLQQSGPFSFRNLGTLAYLGNARALMQLPHENGKQSKYLPTGL 526
Query: 241 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
G ++W+VW SAYLT +SWRNR VA W VFGRD+SR
Sbjct: 527 TGRMAWIVWNSAYLTMSISWRNRLRVAFRWLLNNVFGRDVSR 568
>gi|358371804|dbj|GAA88410.1| alternative NADH-dehydrogenase [Aspergillus kawachii IFO 4308]
Length = 567
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 167/318 (52%), Gaps = 51/318 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+E+E RLLH VVVGGGPTGVEF+GEL DF D+++ +++ VTL+EA +L
Sbjct: 258 TEDEVKRLLHMVVVGGGPTGVEFAGELQDFFEDDLKKWVPEIQENFKVTLVEALPNVLPM 317
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDS---QKLILN-DGTE----VPYGLLVWSTG 116
F +L Y + + + + + +VK+V + ++ N DG++ +PYGLLVW+TG
Sbjct: 318 FSKQLIDYTESTFKEEKISIRAKTMVKNVTDKYIEAMVTNPDGSKSIERIPYGLLVWATG 377
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L LP R G ++E+L V ++V+AVGDC+ T A
Sbjct: 378 NAVRPVVRDLMNQLPAQKDSRRGLAVNEYLVVNGAENVWAVGDCA-------ITNYAPTA 430
Query: 173 QVAERQGKYLFSLLNRIGKA------------GGGRANSAKDMELGD------------- 207
QVA ++G +L L N + K +A + ++ D
Sbjct: 431 QVASQEGAFLARLFNTMAKTEAIEQELKQLSDAQAQAKGEERDQVFDAIRERQKQLRRTK 490
Query: 208 ---PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRF 264
PF Y H GSMA IG+ +A+ D+ + S ++ G +++L WRSAYL+ S RNR
Sbjct: 491 QIGPFQYSHQGSMAYIGKERAVADI--SWLSGNIASGGTMTYLFWRSAYLSMCFSTRNRV 548
Query: 265 YVAVNWATTFVFGRDISR 282
VAV+W +FGRD+SR
Sbjct: 549 LVAVDWIKAKLFGRDVSR 566
>gi|134077054|emb|CAK39927.1| unnamed protein product [Aspergillus niger]
Length = 567
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 167/318 (52%), Gaps = 51/318 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+E+E RLLH VVVGGGPTGVEF+GEL DF D+++ +++ VTL+EA +L
Sbjct: 258 TEDEVKRLLHMVVVGGGPTGVEFAGELQDFFEDDLKKWVPEIQENFKVTLVEALPNVLPM 317
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDS---QKLILN-DGTE----VPYGLLVWSTG 116
F +L Y + + + + + +VK+V + ++ N DG++ +PYGLLVW+TG
Sbjct: 318 FSKQLIDYTESTFKEEKISIRAKTMVKNVTDKYIEAMVTNPDGSKSIERIPYGLLVWATG 377
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L LP R G ++E+L V ++V+AVGDC+ T A
Sbjct: 378 NAVRPVVRDLMNQLPAQKDSRRGLAVNEYLVVNGAENVWAVGDCA-------ITNYAPTA 430
Query: 173 QVAERQGKYLFSLLNRIGKAGG-----GRANSAKDMELGD-------------------- 207
QVA ++G +L L N + K + + A+ G+
Sbjct: 431 QVASQEGAFLARLFNTMAKTEAIEKELKQLSEAQAQAKGEERDQVFDAIRERQKQLRRTK 490
Query: 208 ---PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRF 264
PF Y H GSMA IG+ +A+ D+ + S ++ G +++L WRSAYL+ S RNR
Sbjct: 491 QIGPFQYSHQGSMAYIGKERAVADI--SWLSGNIASGGTMTYLFWRSAYLSMCFSTRNRV 548
Query: 265 YVAVNWATTFVFGRDISR 282
VAV+W +FGRD+SR
Sbjct: 549 LVAVDWIKAKLFGRDVSR 566
>gi|317030427|ref|XP_001392541.2| NADH-ubiquinone oxidoreductase C3A11.07 [Aspergillus niger CBS
513.88]
gi|350629661|gb|EHA18034.1| hypothetical protein ASPNIDRAFT_208150 [Aspergillus niger ATCC
1015]
Length = 578
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 167/318 (52%), Gaps = 51/318 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+E+E RLLH VVVGGGPTGVEF+GEL DF D+++ +++ VTL+EA +L
Sbjct: 269 TEDEVKRLLHMVVVGGGPTGVEFAGELQDFFEDDLKKWVPEIQENFKVTLVEALPNVLPM 328
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDS---QKLILN-DGTE----VPYGLLVWSTG 116
F +L Y + + + + + +VK+V + ++ N DG++ +PYGLLVW+TG
Sbjct: 329 FSKQLIDYTESTFKEEKISIRAKTMVKNVTDKYIEAMVTNPDGSKSIERIPYGLLVWATG 388
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L LP R G ++E+L V ++V+AVGDC+ T A
Sbjct: 389 NAVRPVVRDLMNQLPAQKDSRRGLAVNEYLVVNGAENVWAVGDCA-------ITNYAPTA 441
Query: 173 QVAERQGKYLFSLLNRIGKAGG-----GRANSAKDMELGD-------------------- 207
QVA ++G +L L N + K + + A+ G+
Sbjct: 442 QVASQEGAFLARLFNTMAKTEAIEKELKQLSEAQAQAKGEERDQVFDAIRERQKQLRRTK 501
Query: 208 ---PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRF 264
PF Y H GSMA IG+ +A+ D+ + S ++ G +++L WRSAYL+ S RNR
Sbjct: 502 QIGPFQYSHQGSMAYIGKERAVADI--SWLSGNIASGGTMTYLFWRSAYLSMCFSTRNRV 559
Query: 265 YVAVNWATTFVFGRDISR 282
VAV+W +FGRD+SR
Sbjct: 560 LVAVDWIKAKLFGRDVSR 577
>gi|190346286|gb|EDK38335.2| hypothetical protein PGUG_02433 [Meyerozyma guilliermondii ATCC
6260]
Length = 573
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 157/311 (50%), Gaps = 51/311 (16%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+EE+ RLL VV GGGPTGVE +GEL D+I +D+++ V + +TL+EA ++L++F
Sbjct: 277 DEERKRLLSVVVCGGGPTGVEVAGELQDYIDQDLKKWMPEVSSELKITLVEALPQVLNTF 336
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLI-------LNDGTEVPYGLLVWSTGVG 118
++L Y + + L ++K VD + ++ ++ E PYG+L+W+TG
Sbjct: 337 SEKLVEYTEQVFQDTNIDLRTNTMIKKVDDRMVMGTHKVNGKDEYVEFPYGMLIWATGNA 396
Query: 119 PSTLVKSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
P +V+SL D ++ + +D+ L V +++A+GDC+ T AQV
Sbjct: 397 PRGIVRSLISKIDEQRNAKRGLLVDDRLLVDGTNNIYALGDCTF-------TKYAPTAQV 449
Query: 175 AERQGKYL---FSLLNRIGKAGGGRANSAKDMELGDP--------------------FVY 211
A ++G +L F L+ I +E DP F Y
Sbjct: 450 AFQEGIFLGKHFEELHEIDTL-------KYKLEHPDPKDNVERLTKKLNRLQAKLPIFHY 502
Query: 212 RHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA 271
H GS+A IG +A+ DL S +S G +++L WRSAY+ +S +N+ V ++W
Sbjct: 503 NHQGSLAYIGSERAVADLVWGDWS-NVSTGGTITFLFWRSAYIYMCLSIKNQILVCMDWL 561
Query: 272 TTFVFGRDISR 282
+FGRD S+
Sbjct: 562 KVSMFGRDCSK 572
>gi|419963369|ref|ZP_14479344.1| NADH dehydrogenase [Rhodococcus opacus M213]
gi|414571218|gb|EKT81936.1| NADH dehydrogenase [Rhodococcus opacus M213]
Length = 460
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 142/278 (51%), Gaps = 30/278 (10%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH--VKDYIHVTLIEANEILSSF 66
EE++RLL VVVG GPTGVE +G++++ R + Y + +D V L A+ +L F
Sbjct: 161 EERARLLTFVVVGAGPTGVEMAGQIAELAHRTLVGAYRNFDTRDARIVLLDAASAVLPPF 220
Query: 67 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDG----TEVPYGLLVWSTGVGPST 121
DRL A +L + GV + G V DVD+ + + DG + VWS GV S
Sbjct: 221 GDRLGSTAAERLERIGVEVRLGATVTDVDADGVTIKDGRGETVRIESACKVWSAGVEASP 280
Query: 122 LVKSLDLPKSP----GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
L + L GRI + E L VP ++ F +GD + LP +AQVA +
Sbjct: 281 LARQLAEQSGAELDRAGRIAVREDLTVPGHREAFVIGDM------MARDRLPGVAQVAIQ 334
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
G+Y +I G RA S + PF YR GSMATI R+ A+V + G
Sbjct: 335 GGRYA---ARQIAADAGRRATSPDRV----PFRYRDKGSMATISRFNAVVKV------GG 381
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+ LAGFL+W++W + ++ VV +R+R ++W TF+
Sbjct: 382 IELAGFLAWILWLAVHVVYVVGFRSRLSTLMSWTWTFL 419
>gi|146417471|ref|XP_001484704.1| hypothetical protein PGUG_02433 [Meyerozyma guilliermondii ATCC
6260]
Length = 573
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 157/311 (50%), Gaps = 51/311 (16%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+EE+ RLL VV GGGPTGVE +GEL D+I +D+++ V + +TL+EA ++L++F
Sbjct: 277 DEERKRLLSVVVCGGGPTGVEVAGELQDYIDQDLKKWMPEVSSELKITLVEALPQVLNTF 336
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLI-------LNDGTEVPYGLLVWSTGVG 118
++L Y + + L ++K VD + ++ ++ E PYG+L+W+TG
Sbjct: 337 SEKLVEYTEQVFQDTNIDLRTNTMIKKVDDRMVMGTHKVNGKDEYVEFPYGMLIWATGNA 396
Query: 119 PSTLVKSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
P +V+SL D ++ + +D+ L V +++A+GDC+ T AQV
Sbjct: 397 PRGIVRSLISKIDEQRNAKRGLLVDDRLLVDGTNNIYALGDCTF-------TKYAPTAQV 449
Query: 175 AERQGKYL---FSLLNRIGKAGGGRANSAKDMELGDP--------------------FVY 211
A ++G +L F L+ I +E DP F Y
Sbjct: 450 AFQEGIFLGKHFEELHEIDTL-------KYKLEHPDPKDNVERLTKKLNRLQAKLPIFHY 502
Query: 212 RHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA 271
H GS+A IG +A+ DL S +S G +++L WRSAY+ +S +N+ V ++W
Sbjct: 503 NHQGSLAYIGSERAVADLVWGDWS-NVSTGGTITFLFWRSAYIYMCLSIKNQILVCMDWL 561
Query: 272 TTFVFGRDISR 282
+FGRD S+
Sbjct: 562 KVSMFGRDCSK 572
>gi|432337215|ref|ZP_19588663.1| NADH dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
gi|430775850|gb|ELB91325.1| NADH dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
Length = 448
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 142/278 (51%), Gaps = 30/278 (10%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH--VKDYIHVTLIEANEILSSF 66
EE++RLL VVVG GPTGVE +G++++ R + Y + +D V L A+ +L F
Sbjct: 149 EERARLLTFVVVGAGPTGVEMAGQIAELAHRTLVGAYRNFDTRDARIVLLDAASAVLPPF 208
Query: 67 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDG----TEVPYGLLVWSTGVGPST 121
DRL A +L + GV + G V DVD+ + + DG + VWS GV S
Sbjct: 209 GDRLGSTAAERLERIGVEVRLGATVTDVDADGVTIKDGRGETVRIESACKVWSAGVEASP 268
Query: 122 LVKSLDLPKSP----GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
L + L GRI + E L VP ++ F +GD + LP +AQVA +
Sbjct: 269 LARQLAEQSGAELDRAGRIAVREDLTVPGHREAFVIGDM------MARDRLPGVAQVAIQ 322
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
G+Y +I G RA S + PF YR GSMATI R+ A+V + G
Sbjct: 323 GGRYA---ARQIAADAGRRATSPDRV----PFRYRDKGSMATISRFNAVVKV------GG 369
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+ LAGFL+W++W + ++ VV +R+R ++W TF+
Sbjct: 370 IELAGFLAWILWLAVHVVYVVGFRSRLSTLMSWTWTFL 407
>gi|386875496|ref|ZP_10117662.1| pyridine nucleotide-disulfide oxidoreductase [Candidatus
Nitrosopumilus salaria BD31]
gi|386806697|gb|EIJ66150.1| pyridine nucleotide-disulfide oxidoreductase [Candidatus
Nitrosopumilus salaria BD31]
Length = 446
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 147/277 (53%), Gaps = 21/277 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEA-NEILSSFDD 68
+ + L VVG G GVE GE++ F+ + V+Q Y + D I++ LI + NEIL +
Sbjct: 160 QQKFLTFTVVGAGFAGVETIGEINHFVRKSVKQAYPSIVDTNINMILISSRNEILPELNK 219
Query: 69 RLRHYATTQLSKSGVRLVRGIVKDVDSQK--LILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
+L A L K GVR++ VK +++ + + L+DG +P L+W+ GV ++++KS+
Sbjct: 220 KLGESARAYLEKVGVRIITN-VKAINAGESYVELSDGEIIPCTTLIWTGGVTTNSMIKSM 278
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
+ S G+I +D++L++ +VFA+GDC+ + P AQ A R+ K +
Sbjct: 279 NCEHSKDGKILVDKYLKLKEHSEVFALGDCAAIPDVDTGKFYPPTAQHALRESKI---VA 335
Query: 187 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
I K G + S K+ F Y G MATIG + L G S++G L+W
Sbjct: 336 ENIKKTLDGDS-SLKE------FSYHSKGMMATIGDKAGVASLM------GHSISGVLAW 382
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
++WR+ YL + + + + ++WA FG D++RI
Sbjct: 383 VIWRTYYLLHLPTLETKIRIGISWAINLFFGTDLTRI 419
>gi|397734647|ref|ZP_10501351.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Rhodococcus sp. JVH1]
gi|396929435|gb|EJI96640.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Rhodococcus sp. JVH1]
Length = 462
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/280 (35%), Positives = 146/280 (52%), Gaps = 34/280 (12%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSF 66
EE++RLL VVVG GPTGVE +G++++ R + Y ++ +D V L A+ +L F
Sbjct: 163 EERARLLTFVVVGAGPTGVEMAGQIAELAHRTLVGAYRNIDTRDARIVLLDAASAVLPPF 222
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDG----TEVPYGLLVWSTGVGPST 121
DRL A +L K GV + G V DVD+ + + DG + VWS GV S
Sbjct: 223 GDRLGSTAAERLEKIGVEVRLGAAVTDVDADGVTIKDGRGETVRIESACKVWSAGVEASP 282
Query: 122 LVKSL------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
L + L +L ++ GRI + E L VP +VF +GD + LP +AQVA
Sbjct: 283 LARQLAEQSGAELDRA--GRIAVHEDLTVPGHPEVFVIGDM------MARDRLPGVAQVA 334
Query: 176 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 235
+ G+Y +I GR +S + PF YR G+MATI R+ A+V +
Sbjct: 335 IQGGRYA---AKQIAAGARGRDSSPDRV----PFQYRDKGAMATISRFHAVVKV------ 381
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
G+ LAG L+W++W + ++ VV +R+R ++W TFV
Sbjct: 382 GGIELAGLLAWILWLAVHVVYVVGFRSRLSTLMSWTWTFV 421
>gi|354543521|emb|CCE40240.1| hypothetical protein CPAR2_102780 [Candida parapsilosis]
Length = 568
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 158/309 (51%), Gaps = 44/309 (14%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
S+ E+ RLL VV GGGPTGVE +GE+ D+I +D+ + ++ + VTL+EA +L++
Sbjct: 270 SDPERKRLLQIVVCGGGPTGVEAAGEIQDYIDQDLHKWVPELEGELKVTLVEALPNVLNT 329
Query: 66 FDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILN----DGT----EVPYGLLVWSTG 116
F+ +L Y + + L+ ++K V + L + DG+ E+PYG+L+W+TG
Sbjct: 330 FNKKLIDYTKEVFKDTNINLMTNTMIKKVGDKVLTASQKQPDGSTKTVEIPYGVLIWATG 389
Query: 117 VGP----STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
L+ ++ K+ + +DE L+V ++FA+GDC+ T P A
Sbjct: 390 NAARGFTRDLMSKIEEQKNAKRGLLVDECLKVDGTSNIFALGDCTF-------TKYPPTA 442
Query: 173 QVAERQGKYLFSLLNRIGKA-------------------GGGRANSAKDMELGDPFVYRH 213
QVA ++G+YL ++ + G A + K + F Y +
Sbjct: 443 QVAFQEGEYLAKYFEKLHQVESLQYQIQHPTPKQNVDTLGKKLARAEKSLP---KFQYNY 499
Query: 214 LGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATT 273
GS+A IG KA+ DL S ++ G ++L WRSAY+ +S +N+ V ++W
Sbjct: 500 QGSLAYIGSEKAVADLVWGDWS-NITSGGNFTFLFWRSAYIYMCLSVKNQCLVILDWMKV 558
Query: 274 FVFGRDISR 282
++FGRD S+
Sbjct: 559 YLFGRDCSK 567
>gi|451852875|gb|EMD66169.1| hypothetical protein COCSADRAFT_197678 [Cochliobolus sativus
ND90Pr]
Length = 580
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 157/352 (44%), Gaps = 96/352 (27%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 69
K +LL+ VVGGGPTG+EFS EL D I D+++ Y + Y +T+ + A ++L FD +
Sbjct: 246 KRQLLNFAVVGGGPTGIEFSAELHDLINEDLKKLYPELIQYHKITVYDVAEKVLPMFDKK 305
Query: 70 LRHYATTQLSKSGVRLVRG------------------IVKDVDSQKLILNDGTEVPYGLL 111
L YA + + G+ + V+D L + + E+ G+
Sbjct: 306 LADYAMQKFKREGIDIKTSHHVEELRAGAPVETSNSETVQDSHLYTLRIKEQGEIGVGMC 365
Query: 112 VWSTGV---------------GPSTLVKSL--------------------DLPKSP-GGR 135
VWSTG+ PS L+ S + K P G
Sbjct: 366 VWSTGLMQNPFVHTALSSVRSAPSNLITSSTSSSSSSSSSSSSSSSSIQWTVKKDPKSGS 425
Query: 136 IGIDEWLRVP---------------SVQ---------DVFAVGDCSGYLESTGKTVLPAL 171
I D LRV SVQ DVFA+GDC G +++T PA
Sbjct: 426 IVTDSHLRVKLVPASDSSSSYAEKDSVQADKTEAINPDVFALGDC-GIIDAT---TYPAT 481
Query: 172 AQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQ 231
AQVA ++ +L LN+ A SAK F YR LG++A IG + AL Q
Sbjct: 482 AQVASQKAVWLAKQLNK----SSTLAESAKG------FTYRDLGTLAYIGNWNALF---Q 528
Query: 232 NKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G L G+++W++WR AY+TR VS RN+ V V W +VFGRDISR
Sbjct: 529 GGGKWGGRLQGYVAWIIWRGAYITRTVSLRNKVLVPVYWVVNWVFGRDISRF 580
>gi|171685906|ref|XP_001907894.1| hypothetical protein [Podospora anserina S mat+]
gi|170942914|emb|CAP68567.1| unnamed protein product [Podospora anserina S mat+]
Length = 582
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 164/319 (51%), Gaps = 54/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
S EE RL+H VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L S
Sbjct: 274 SPEEIDRLMHMVVVGGGPTGVEFAGELQDFFEEDIKKLVPEISDRFRVTLIEALPNVLPS 333
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL----ILNDGTE----VPYGLLVWSTG 116
F +L Y + + + + + +VK V + + DGT+ PYGLLVW+TG
Sbjct: 334 FSKQLIEYTESTFKEEKINIHTKTMVKKVTDKTVEAVATRPDGTKETIVFPYGLLVWATG 393
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPA 170
+V+ L +P R G ++E+L V +D++AVGDC +GY +
Sbjct: 394 NAVRPVVQDLMQRIPAQKNSRRGLAVNEYLVVQGARDIWAVGDCAVAGYAPT-------- 445
Query: 171 LAQVAERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD------ 207
AQVA ++G +L L N + + G A ++++E +
Sbjct: 446 -AQVASQEGNFLARLFNNMARTEALENKIAELSGSLNLQPGNTAEISREIEEYERQLRRI 504
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG KA+ D+ + ++ AG L++L WRSAY++ S RNR
Sbjct: 505 KDVKPFHYSHQGSLAYIGSEKAVADV--TWFNGNVAAAGGLTYLFWRSAYISMCFSTRNR 562
Query: 264 FYVAVNWATTFVFGRDISR 282
V +W + +FGRD+SR
Sbjct: 563 LLVINDWLKSKLFGRDLSR 581
>gi|320580764|gb|EFW94986.1| NADH dehydrogenase [Ogataea parapolymorpha DL-1]
Length = 537
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 161/303 (53%), Gaps = 38/303 (12%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFD 67
EE+ RLLH VVVGGGPTGVEF+GEL D++ D+ + + + +TLIEA +L+SF
Sbjct: 241 EERKRLLHFVVVGGGPTGVEFAGELKDYVDEDLTKWMPSIAKEVQITLIEALPNVLNSFS 300
Query: 68 DRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILN----DGT----EVPYGLLVWSTGVG 118
L YA +++ + L+ V V + + + DG+ E+PYG+LVW+ G+
Sbjct: 301 KSLWTYAQKTFAENNIELILNTAVNKVTATTITASTKKKDGSVEQKEIPYGMLVWAAGIR 360
Query: 119 PSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
P+ L + G R G +DE L+V ++V+A+GDC+ TG P QV
Sbjct: 361 PANFTNHLISKIEAQAGARRGLLVDENLKVKGTENVYAIGDCAF----TGH---PPTGQV 413
Query: 175 AERQGKYLFSLLNRIG-----KAGGGRANSAK---------DMELGD--PFVYRHLGSMA 218
A ++G YL S ++ ++ RA+++ D L PF Y HLGS++
Sbjct: 414 AHQEGHYLASTFAKMAAIDDLQSELARASNSDERAKVQARLDAALAQIKPFKYNHLGSLS 473
Query: 219 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
+G KA+ DL S S G ++L+WRS+Y+ +S R R VA +W +FGR
Sbjct: 474 YVGGEKAVADLVWGSFS-STSTGGAFTYLIWRSSYIAMCISARMRALVAADWLKVSLFGR 532
Query: 279 DIS 281
D++
Sbjct: 533 DLT 535
>gi|295669872|ref|XP_002795484.1| external NADH-ubiquinone oxidoreductase [Paracoccidioides sp.
'lutzii' Pb01]
gi|226285418|gb|EEH40984.1| external NADH-ubiquinone oxidoreductase [Paracoccidioides sp.
'lutzii' Pb01]
Length = 587
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 163/320 (50%), Gaps = 54/320 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+EEE RLLH VVVGGGPTGVEF+GEL DF D+++ +KD+ +TL+EA +L +
Sbjct: 277 TEEEVKRLLHMVVVGGGPTGVEFAGELQDFFNDDLKKWVPEIKDHFKITLVEALPNVLPT 336
Query: 66 FDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTE---------VPYGLLVWST 115
F +L Y + + + L + VK V S K I + T+ +PYGLLVW+T
Sbjct: 337 FSKQLIDYTESTFKEEEITILTKTSVKKV-SDKYIEAEATKPDGSKEMETIPYGLLVWAT 395
Query: 116 GVGPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 171
G +V+ L +P R + ++E+L V ++++AVGDC+ T
Sbjct: 396 GNSIRGVVRDLINQIPAQKNSRRGLAVNEYLVVNGTENIWAVGDCA-------ITNYAPT 448
Query: 172 AQVAERQGKYLFSLLN-------------RIGKAGGGRANSAKDMELGD----------- 207
AQVA ++G +L L N ++ KA N ++ D
Sbjct: 449 AQVASQEGAFLARLFNSMAKTEAIDAQLKQLSKAQAEAQNEEARTKILDEIRGLQKVLRR 508
Query: 208 -----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRN 262
PF Y H GS+A IG+ +A+ D+ + S ++ G L++L WRS YL+ S RN
Sbjct: 509 IKQIGPFQYSHQGSLAYIGKERAVADV--SWLSGNIASGGTLTYLFWRSVYLSMCFSTRN 566
Query: 263 RFYVAVNWATTFVFGRDISR 282
R VA +W +FGRD+SR
Sbjct: 567 RVLVAFDWFKAKLFGRDVSR 586
>gi|410697032|gb|AFV76100.1| NADH dehydrogenase, FAD-containing subunit [Thermus oshimai JL-2]
Length = 402
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 140/278 (50%), Gaps = 30/278 (10%)
Query: 1 MFLAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60
+ LA R L +VVGGGPTGVE +G L++F+ +R+ + V V L+EA
Sbjct: 134 LLLALEGAARGERPLRLLVVGGGPTGVELAGALAEFLRYALRRDFPEVGG-AEVLLLEAG 192
Query: 61 E-ILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVG 118
E +L SF L YA L GVR+V G V V+ L +G +P L++W+ GV
Sbjct: 193 ERLLPSFRPALSAYAKRALEGMGVRVVLGAQVVGVEEGGARLREGAFLPADLVLWAVGVR 252
Query: 119 PSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 178
+ L LP P GR+ D +LR+P +V+AVGD +G LP LA VA +Q
Sbjct: 253 GNPLP---GLPTDPRGRVPTDPFLRLPGHPEVYAVGDVNG-------LGLPGLAPVALQQ 302
Query: 179 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 238
G+ L R A + PF YR G +A IGR KA+ ++ GL
Sbjct: 303 GRLAAENLLR-----------ALRGQEPIPFRYRDRGQLAVIGRNKAVAEI------GGL 345
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 276
+ GF +W +W ++ ++ +RNR V +NW T++F
Sbjct: 346 AFTGFPAWALWAFVHIRELIGFRNRLLVLLNWGYTYLF 383
>gi|406603829|emb|CCH44688.1| External NADH-ubiquinone oxidoreductase 1,mitochondrial
[Wickerhamomyces ciferrii]
Length = 549
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 163/305 (53%), Gaps = 36/305 (11%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
++ E++RLL VVVGGGPTGVEF+GEL DF+ +D+ + Y + I V+L+EA IL+
Sbjct: 251 NDPERARLLSFVVVGGGPTGVEFAGELQDFVDQDLVKWYPEISKEIKVSLVEALPNILNM 310
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLIL----NDGT----EVPYGLLVWSTG 116
F+ +L Y S+ + L ++ +VK VD +K+ +DGT E+PYG+LVW+TG
Sbjct: 311 FNKKLIKYTEDVFSEENISLKLQTMVKKVDDKKITASIKNSDGTTSIEEIPYGVLVWATG 370
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
G + K++ L G ID++L+ +FAVGDC + P A
Sbjct: 371 NGGREITKNIAGQLEGQTFANRGLIIDDYLKAVGSDSIFAVGDC-----VLSRKFAPT-A 424
Query: 173 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG---------------DPFVYRHLGSM 217
Q A + G YL L + K + + E +PF + +LGS+
Sbjct: 425 QAAYQHGIYLSKLFKNLAKIDSHKYKLEQTPEASEKAKILSKIDKISNFEPFQFVYLGSL 484
Query: 218 ATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFG 277
A IG +A+ DL SK LSL G L++L W+SAY+ +S+RNR V ++W +FG
Sbjct: 485 AYIGSERAIADLSWGNWSK-LSLGGSLTFLFWKSAYVGMCLSFRNRCLVVLDWVKVSIFG 543
Query: 278 RDISR 282
RD S+
Sbjct: 544 RDSSK 548
>gi|171685800|ref|XP_001907841.1| hypothetical protein [Podospora anserina S mat+]
gi|170942861|emb|CAP68514.1| unnamed protein product [Podospora anserina S mat+]
Length = 541
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 163/341 (47%), Gaps = 89/341 (26%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
+++++K LLH VVGGGPTG+E++ EL DFI D+ + Y + ++ +T+ + A ++L
Sbjct: 227 LTDDDKRALLHFAVVGGGPTGIEWAAELHDFIRDDLGKMYPELMRFVKITVYDVAPKVLP 286
Query: 65 SFDDRLRHYATTQLSKSGVRL----------------------VRGIVKDVDSQKLILND 102
FD L YA ++ G+ + VR +++V+ +
Sbjct: 287 MFDKALADYAMGHFARQGIEVKTEHHLERIRLADGKLGRRHGAVRIKIREVE------EN 340
Query: 103 GTEVPYGLLVWSTGVGPSTLVKSL-------DLPKSP----------------GGRIGID 139
G EV G++VWSTG+ + L+ L K+P G + +D
Sbjct: 341 GGEVGAGMVVWSTGLMANPLIAKLAEKEVVVSKSKNPMTGEVLERRRLVRDKRSGGLVVD 400
Query: 140 EWLRVPSVQ-----------------DVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
++R SV V+ +GDCS ++E LP AQVA ++ +YL
Sbjct: 401 GYMRALSVDADAKPEEGNELEKKPLDGVYVIGDCS-FIEHD---PLPKTAQVAAQEAQYL 456
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
LN+ G + G F +R+ G+M +G +KA+ +SK L G
Sbjct: 457 AKELNKGISPG----------QDGKEFKFRNWGTMTYLGGWKAI------HQSKADELKG 500
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+++W++WR AYLT+ +SWRN+ V + W +++FGR ISR
Sbjct: 501 WVAWVLWRGAYLTKAMSWRNKLLVPIYWVISWIFGRGISRF 541
>gi|385810344|ref|YP_005846740.1| NADH dehydrogenase [Ignavibacterium album JCM 16511]
gi|383802392|gb|AFH49472.1| NADH dehydrogenase [Ignavibacterium album JCM 16511]
Length = 411
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 147/280 (52%), Gaps = 22/280 (7%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILS 64
+ E + L V+VGGGPTGVE +G +++ + + Y + + + V LIEA + ILS
Sbjct: 147 NHELMKKYLTFVIVGGGPTGVELAGAIAEIAKETMIKDYKNFRPEDTKVFLIEAMDRILS 206
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
SFD +L A L GV + + SQ + + +P ++W+ G S L+K
Sbjct: 207 SFDKKLSEQAKEDLMNMGVEVKLNAKVENISQDGVHTNQEFIPSKTIIWAAGNQASPLLK 266
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
SL++ GR+ + + +P ++F +GD + + E G VLP +AQVA +QGK++
Sbjct: 267 SLNVETDRAGRVIVKKDCSIPGNPEIFLIGDAAHFEEENG-NVLPGVAQVAIQQGKFVAE 325
Query: 185 LL-NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
++ N+I E F Y+ G+MATIG+ KA+ ++ KGL L+G
Sbjct: 326 VIKNQIPP------------ERRPSFRYKDKGTMATIGKAKAVAEI------KGLKLSGV 367
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
++WL W ++ ++ +RNRF V + W ++ R +R+
Sbjct: 368 IAWLAWSIVHIFFLIGFRNRFRVMIEWIWYYITKRHGTRL 407
>gi|299739101|ref|XP_001835053.2| NADH dehydrogenase [Coprinopsis cinerea okayama7#130]
gi|298403623|gb|EAU86695.2| NADH dehydrogenase [Coprinopsis cinerea okayama7#130]
Length = 563
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/316 (35%), Positives = 163/316 (51%), Gaps = 45/316 (14%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
G S EE RLLH VVVGGGPTGVE SGEL DF+ D++ Y + I +TL+EA
Sbjct: 256 FPGQSPEEIDRLLHMVVVGGGPTGVEVSGELHDFLEDDLKHWYPELAGRIRITLVEALPS 315
Query: 62 ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN--DGT--EVPYGLLVWSTG 116
+L F +L Y + +S + L + +VK+V + ++L D + EVP GL+VW+ G
Sbjct: 316 VLPMFSRQLIDYTESTFKESKIDILTKTMVKEVKEKSVVLQMPDKSIKEVPCGLVVWAAG 375
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+ + L LP++ R G +D+ LR+ VFA+GDC+ T A
Sbjct: 376 NKGRKITQDLMAKLPETQTNRRGLTVDDHLRLKGADGVFAIGDCTA-------TSYAPTA 428
Query: 173 QVAERQGKYLFSLLNRIGKAGG--GRANSAKDMELGDP---------------------- 208
QVA +QG YL +L+++ K R +++++ DP
Sbjct: 429 QVASQQGAYLARVLHQLAKKDSIEQRLKKLEEIQVEDPAEKEKLEKEAKLLQSQLAKVKP 488
Query: 209 --FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYV 266
F Y H GS+A IG +A+ DL + ++ G ++L WRSAYL+ + S RNR V
Sbjct: 489 RAFQYSHQGSLAYIGSERAIADL--PFMNGNVATGGVATYLFWRSAYLSTLFSLRNRTLV 546
Query: 267 AVNWATTFVFGRDISR 282
A +W +FGRD+SR
Sbjct: 547 ATDWLKVRLFGRDVSR 562
>gi|406867436|gb|EKD20474.1| NADH-ubiquinone oxidoreductase C3A11.07 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 574
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 162/321 (50%), Gaps = 54/321 (16%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEIL 63
G + EE RLLH VVVGGGPTGVEF+GEL DF +D+++ + D VTLIEA +L
Sbjct: 264 GQTPEEVERLLHMVVVGGGPTGVEFAGELQDFFDQDIKKWIPEISDKFKVTLIEALPSVL 323
Query: 64 SSFDDRLRHYATTQLSKSGVRL-----VRGIVKDVDSQKLILNDGTE----VPYGLLVWS 114
+F +L Y + + + + V+ + + DG + +PYGLLVW+
Sbjct: 324 PTFSKQLIDYTESTFKEEKITIKTKTAVKKVTDTTVEAEATGPDGKKTMEVMPYGLLVWA 383
Query: 115 TGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVL 168
TG +VK L +P R G ++E+L V +D++A GDC +GY +
Sbjct: 384 TGNAVRPIVKDLMASIPAQKDSRRGLAVNEYLVVQGAKDIWATGDCAVAGYAPT------ 437
Query: 169 PALAQVAERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD---- 207
AQVA ++G +L L N + K+ G A AK++E +
Sbjct: 438 ---AQVAAQEGAFLARLFNTMAKSEAIESKIHELSSSLNLQPGDAAGIAKEIESHERQLR 494
Query: 208 ------PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWR 261
PF Y H GS+A IG +A+ D+ + + + G L++L WRSAYL+ S R
Sbjct: 495 RVKDIKPFHYTHQGSLAYIGSERAVADV--SWLNGNFATGGGLTYLFWRSAYLSMCFSTR 552
Query: 262 NRFYVAVNWATTFVFGRDISR 282
NR V ++W + FGRD+SR
Sbjct: 553 NRVLVVLDWLKSKAFGRDVSR 573
>gi|404497889|ref|YP_006721995.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase family
protein [Geobacter metallireducens GS-15]
gi|418066970|ref|ZP_12704324.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Geobacter metallireducens RCH3]
gi|78195489|gb|ABB33256.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase family
protein [Geobacter metallireducens GS-15]
gi|373559541|gb|EHP85834.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Geobacter metallireducens RCH3]
Length = 413
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 138/271 (50%), Gaps = 36/271 (13%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEA-NE 61
++ L+ V+VGGGPTGVEF+G L + + RY KDY V L+EA +
Sbjct: 149 KRRALMTFVIVGGGPTGVEFAGALMELV------RYVLAKDYPELSVQAARVVLVEAFDR 202
Query: 62 ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120
+L++ L+ Y +L GV L V D + +++IL+DG +P L WS GV +
Sbjct: 203 LLAAMPQELQVYTLEKLRAMGVEVLFNARVVDAEPERVILHDGAIIPAHTLFWSAGVKAA 262
Query: 121 TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGK 180
L +L + PGGRI ++ L + +V+ +GD + +LE G LP +A VA + G
Sbjct: 263 PLAATLGVTPKPGGRIPVEPDLTLAGHPEVYVIGDMA-HLEQDGAA-LPMVAPVAMQMGT 320
Query: 181 YLFSLLNRIGKAGGGRANSAKDM-ELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
Y G A A++ E PF YR GSMATIGR A+ + G+
Sbjct: 321 Y------------AGEAIVAREKGETPKPFRYRDRGSMATIGRSAAVAC------AFGMK 362
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
GF +WLVW +L ++ +RNR V +NW
Sbjct: 363 FRGFSAWLVWLLLHLYYLIGFRNRIVVMLNW 393
>gi|443916493|gb|ELU37549.1| NADH dehydrogenase [Rhizoctonia solani AG-1 IA]
Length = 580
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/310 (34%), Positives = 159/310 (51%), Gaps = 45/310 (14%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDF--IMRDVRQRYSHVKDYIHVTLIEA-NEIL 63
S+EE RLLHCVVVGGGPTGVE SGEL DF + D+ Y + + +TLIEA +L
Sbjct: 281 SDEEIDRLLHCVVVGGGPTGVELSGELHDFLKVYEDLENWYPDIAPRLRITLIEALPNVL 340
Query: 64 SSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT----EVPYGLLVWSTG-V 117
+F L Y + ++ + + + +VK++ + +++ + E+P+G +VW+ G V
Sbjct: 341 PTFSRELIKYTESTFKENKIDVMTKTMVKEIKEKSVLVQNAAGERVEIPFGAIVWAAGNV 400
Query: 118 GPSTLVKSLD-LPKSPGGRIGI--DEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
G K ++ P+ + GI D++LR+ +FAVGDC+ T AQV
Sbjct: 401 GRPITRKLMEHFPEHQTNKRGITVDDFLRMKGADGIFAVGDCTA-------TSYAPTAQV 453
Query: 175 AERQGKYLFSLLNRIGK------------AGGGRANSAKDMELG----------DPFVYR 212
A ++G YL L +I K AG + + +E PF Y
Sbjct: 454 ASQEGTYLARLFGQIAKKDKLEKRLAELRAGPHTDETERQIESVVKQINKASKLRPFHYS 513
Query: 213 HLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWAT 272
H GS+A IG KA+ DL + G G ++L WRSAYL+ + S RNRF V +W
Sbjct: 514 HQGSLAYIGSEKAIADLPFLNGNVG----GVATYLFWRSAYLSNLFSLRNRFLVINDWLK 569
Query: 273 TFVFGRDISR 282
+FGRD+SR
Sbjct: 570 VKIFGRDVSR 579
>gi|269839149|ref|YP_003323841.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Thermobaculum terrenum ATCC BAA-798]
gi|269790879|gb|ACZ43019.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Thermobaculum terrenum ATCC BAA-798]
Length = 428
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 139/274 (50%), Gaps = 20/274 (7%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDV-RQRYSHVKDYIHVTLIEANEILSSFDD 68
E RLL V VGGG +GVE + ++ F+ R V R H D V + + +L +
Sbjct: 163 EHQRLLTFVTVGGGLSGVETTAAVNAFVRRLVLRYPNLHPADVRVVLVHHGSRLLEELGE 222
Query: 69 RLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
RL Y +L +SGV L+R + +V + L G ++ +VW+ GV P+ +V ++
Sbjct: 223 RLAAYTHQELERSGVEVLLRTELSEVAGDHVTLKGGRQIRTKTVVWTAGVAPNPIVDRIE 282
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
PK G + +D +L VP ++AVGDC+ G + P AQ A R+G+ + + +
Sbjct: 283 APKGAHGGLKVDPYLSVPGHPGLWAVGDCAEVPRVGGGSYAPT-AQNATREGRTVAANIA 341
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ + GRA PF Y +G +A +GR A+ DL KG+ L+G +WL
Sbjct: 342 LVSQ---GRAPR--------PFRYSPIGELALVGRRSAIADL------KGIKLSGLPAWL 384
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
+WR YL ++ S R VA +W + GRDI+
Sbjct: 385 LWRGVYLAKIPSGSQRLRVAADWLLEVLAGRDIN 418
>gi|225682897|gb|EEH21181.1| external NADH-ubiquinone oxidoreductase [Paracoccidioides
brasiliensis Pb03]
Length = 587
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 164/320 (51%), Gaps = 54/320 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+E+E RLLH VVVGGGPTGVEF+GEL DF D+++ +KD+ +TL+EA +L +
Sbjct: 277 TEKEVKRLLHMVVVGGGPTGVEFAGELQDFFNDDLKKWVPEIKDHFKITLVEALPNVLPT 336
Query: 66 FDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTE---------VPYGLLVWST 115
F +L Y + + + L + VK V S K I + T+ +PYGLLVW+T
Sbjct: 337 FSKQLIDYTESTFKEEEITILTKTSVKKV-SDKYIEAEATKPDGSKEMETIPYGLLVWAT 395
Query: 116 GVGPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 171
G +V+ L +P+ R + ++E+L V ++++AVGDC+ T
Sbjct: 396 GNSIRGVVRDLINQIPEQKNSRRGLAVNEYLVVNGTENIWAVGDCAV-------TNYAPT 448
Query: 172 AQVAERQGKYLFSLLN-------------RIGKAGGGRANSAKDMELGD----------- 207
AQVA ++G +L L N ++ KA N ++ D
Sbjct: 449 AQVASQEGAFLARLFNSMAKTEAIDAQLKQLSKAQAEAQNEEARTKILDEIRGLQKVLRR 508
Query: 208 -----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRN 262
PF Y H GS+A IG+ +A+ D+ + S ++ G L++L WRS YL+ S RN
Sbjct: 509 IKQIGPFQYSHQGSLAYIGKERAVADV--SWLSGNIASGGTLTYLFWRSVYLSMCFSTRN 566
Query: 263 RFYVAVNWATTFVFGRDISR 282
R VA +W +FGRD+SR
Sbjct: 567 RVLVAFDWFKAKLFGRDVSR 586
>gi|238492833|ref|XP_002377653.1| pyridine nucleotide-disulphide oxidoreductase, putative
[Aspergillus flavus NRRL3357]
gi|220696147|gb|EED52489.1| pyridine nucleotide-disulphide oxidoreductase, putative
[Aspergillus flavus NRRL3357]
Length = 559
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 154/338 (45%), Gaps = 74/338 (21%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L + E + LLH +VG GPTG E + L DFI +D+ Y +KD +TL + A +
Sbjct: 237 LPTTTPEMRKWLLHFAIVGAGPTGTELAASLRDFIYKDMTILYPALKDLPRITLYDVAPK 296
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-----VRGI---------VKDVDSQKLIL---NDGT 104
+LS FD+ L YA + K G+ + V G+ ++D ++ + +
Sbjct: 297 VLSMFDESLSKYAMETMKKEGIDIKTSHHVEGLRWGEPGAEPPYEMDPKRCLTITTKEEG 356
Query: 105 EVPYGLLVWSTGVG-----------------PSTLVKSLDLP-------------KSPG- 133
EV G+ VW TG STL+K P K+P
Sbjct: 357 EVGIGMCVWVTGNAMNKFVNKALQDVETFPTASTLLKDGTHPPPELTKDTTWHIKKAPKV 416
Query: 134 GRIGIDEWLRV---------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
G + +D LRV +QDVFA+GD + + TG PA AQ ++ K+L +
Sbjct: 417 GALLVDGQLRVQLENADGKIAVLQDVFALGDNA--MPETGAP--PATAQATTQEAKWLAT 472
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
LN+ D++ PF + ++G++A IG AL+ + L G +
Sbjct: 473 RLNK------------GDLQTSQPFSFHNMGTLAYIGDANALMQFPTEDDKPPKYLTGRM 520
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
+W VW SAYLT +SWRN+ +A W +FGRD+SR
Sbjct: 521 AWFVWNSAYLTMSMSWRNKLRIAFRWLLNNIFGRDVSR 558
>gi|391873758|gb|EIT82766.1| NADH-dehydrogenase [Aspergillus oryzae 3.042]
Length = 559
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 154/338 (45%), Gaps = 74/338 (21%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L + E + LLH +VG GPTG E + L DFI +D+ Y +KD +TL + A +
Sbjct: 237 LPTTTPEMRKWLLHFAIVGAGPTGTELAASLRDFIYKDMTILYPALKDLPRITLYDVAPK 296
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-----VRGI---------VKDVDSQKLIL---NDGT 104
+LS FD+ L YA + K G+ + V G+ ++D ++ + +
Sbjct: 297 VLSMFDESLSKYAMETMKKEGIDIKTSHHVEGLRWGEPGAEPPYEMDPKRCLTITTKEEG 356
Query: 105 EVPYGLLVWSTGVG-----------------PSTLVKSLDLP-------------KSPG- 133
EV G+ VW TG STL+K P K+P
Sbjct: 357 EVGIGMCVWVTGNAMNKFVNKALQDVETFPTASTLLKDGTHPPPELTKDTTWHIKKAPKV 416
Query: 134 GRIGIDEWLRV---------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
G + +D LRV +QDVFA+GD + + TG PA AQ ++ K+L +
Sbjct: 417 GALLVDGQLRVQLENADGKIAVLQDVFALGDNA--MPETGAP--PATAQATTQEAKWLAT 472
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
LN+ D++ PF + ++G++A IG AL+ + L G +
Sbjct: 473 RLNK------------GDLQTSQPFSFHNMGTLAYIGDANALMQFPTEDDKPPKYLTGRM 520
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
+W VW SAYLT +SWRN+ +A W +FGRD+SR
Sbjct: 521 AWFVWNSAYLTMSMSWRNKLRIAFRWLLNNIFGRDVSR 558
>gi|328769598|gb|EGF79641.1| hypothetical protein BATDEDRAFT_16765 [Batrachochytrium
dendrobatidis JAM81]
Length = 519
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 160/318 (50%), Gaps = 51/318 (16%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-E 61
G ++EE RLLH VVVGGGPTGVE++ EL DF+ D+ Y + +TL+EA+
Sbjct: 214 FPGQTDEEIRRLLHMVVVGGGPTGVEYAAELYDFLHEDLLTWYPDLAGKFKITLVEASPH 273
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTE----VPYGLLVWSTG 116
+L F +L Y + + V ++ VK V+ + + + D + +PYGL+VW+TG
Sbjct: 274 VLPMFSKQLIEYTEHHFAANKVTILNNTSVKQVNQRDIQVMDAEKNLNTIPYGLIVWATG 333
Query: 117 VGPSTLVKSL--DLPKSPGGR---IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 171
+V+ L LP + + +D++L + D+F +GD + T
Sbjct: 334 NTARPIVQDLIKKLPSDVQNQRRGLVVDDFLAIKGATDMFGLGDATA-------TKWAPT 386
Query: 172 AQVAERQGKYLFSLLNRIGKAGGGRAN---------SAKD------------------ME 204
AQVA RQG+YL ++ N +G+ + N +A D M
Sbjct: 387 AQVASRQGRYLANMFNHMGELDTAKTNPKESSLALTNATDPAYKTPNTSATTTLHQALMA 446
Query: 205 LGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRF 264
G PF Y HLGS+A IG+ A+ + G+++ G ++ WRSAYL+ + S RNR
Sbjct: 447 CG-PFQYDHLGSLAYIGKDHAIAEF-----PFGVTVGGAATYFFWRSAYLSTLFSLRNRV 500
Query: 265 YVAVNWATTFVFGRDISR 282
VA +WA FGRDISR
Sbjct: 501 LVAFDWAKKKCFGRDISR 518
>gi|402077373|gb|EJT72722.1| hypothetical protein GGTG_09580 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 573
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 166/320 (51%), Gaps = 55/320 (17%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+ EE RLL VVVGGGPTGVEF+GEL+DF D+R+ + D VTL+EA +L S
Sbjct: 264 TPEEIDRLLSVVVVGGGPTGVEFAGELADFFEEDIRKLIPEISDRFRVTLVEALPSVLPS 323
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL----ILNDGTE----VPYGLLVWSTG 116
F +L Y + L + +++ + +V+ V + + DGT+ +PYGLLVW+TG
Sbjct: 324 FSKQLIEYTESTLKEEKIQIETKTMVQKVTDKTVEATTTRPDGTKERRVLPYGLLVWATG 383
Query: 117 VGPSTLVKSL--DLPKSPGGRIGI--DEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPA 170
LVK L +P R G+ +E+L V +D++A+GDC +GY+ +
Sbjct: 384 NAVRPLVKDLCARIPAQKDSRRGLATNEYLVVQGARDIWAIGDCAVAGYVPT-------- 435
Query: 171 LAQVAERQGKYLFSLLNRIGKAGGGRA-----NSAKDMELG------------------- 206
AQVA ++G +L L N + K A +S+ +++ G
Sbjct: 436 -AQVASQEGAFLARLFNNMAKTEAVEARIQDLSSSLNLKPGVNAAEISAQIAEHERKLRR 494
Query: 207 ----DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRN 262
PF Y H GS+A IG KA+ D+ + + G L++L WRSAYL+ S RN
Sbjct: 495 VKDIKPFHYSHQGSLAYIGSDKAVADI--SWLDGNFATGGRLTYLFWRSAYLSMCFSGRN 552
Query: 263 RFYVAVNWATTFVFGRDISR 282
R V +W + +FGRD+SR
Sbjct: 553 RILVINDWLKSKLFGRDVSR 572
>gi|366987145|ref|XP_003673339.1| hypothetical protein NCAS_0A03930 [Naumovozyma castellii CBS 4309]
gi|342299202|emb|CCC66951.1| hypothetical protein NCAS_0A03930 [Naumovozyma castellii CBS 4309]
Length = 542
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 173/299 (57%), Gaps = 36/299 (12%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E+ RLL+ VVVGGGPTGVEF+ EL+D++ +D+++ + I VTL+EA IL+ F
Sbjct: 254 DPERQRLLNFVVVGGGPTGVEFAAELNDYVSQDLKKWLPDISKDIKVTLVEALPNILNMF 313
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN-DGTEV--PYGLLVWSTGVGPSTL 122
+ L Y T L K + L ++ +V+ VD + DG EV PYG+LVW+TG P+ L
Sbjct: 314 EKSLIDYTQTFLQKENIDLKLKTMVQSVDENIVTAKMDGKEVEIPYGVLVWATGNAPTQL 373
Query: 123 VKSL--DLPK---SPGGRIGIDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVAE 176
K + DL + SP G + I++ L++ +D VFA+GDC+ + + P AQVA
Sbjct: 374 AKKMMNDLKEEQTSPRGLL-INDRLQMLGAEDSVFAIGDCTFH-----PGLFPT-AQVAH 426
Query: 177 RQGKYL---FSLLNRIGKA----GGGRANSAKDM-----ELGDPFVYRHLGSMATIGRYK 224
++G YL F LL+++ + ++ K++ +L +PF Y H G+++ IG +
Sbjct: 427 QEGGYLAEQFKLLHQLDQCKWEMNTANTDNTKELNKLENKLNEPFKYIHRGTLSYIGAER 486
Query: 225 ALVDLR--QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
A+V+L NK + G ++ W++ YL+ +S++NR VA +W T+ FGRD S
Sbjct: 487 AIVELTIGDNK----FKMHGPFAFWFWKTVYLSMCLSFKNRALVAFDWCKTYFFGRDSS 541
>gi|336469690|gb|EGO57852.1| hypothetical protein NEUTE1DRAFT_137632 [Neurospora tetrasperma
FGSC 2508]
gi|350290652|gb|EGZ71866.1| hypothetical protein NEUTE2DRAFT_166857 [Neurospora tetrasperma
FGSC 2509]
Length = 556
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 164/339 (48%), Gaps = 76/339 (22%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL 63
+++E+++ LLH +VGGGPTG+E++ EL D I D+ + Y + ++ +T+ + + ++L
Sbjct: 234 NLTDEDRANLLHFAIVGGGPTGIEYASELHDLIHDDLSKMYPDLLKFVRITVYDVSPKVL 293
Query: 64 SSFDDRLRHYATTQLSKSGVRL--------VRGIVKDVDSQ------KLILNDGTEVPYG 109
FD L YA + + + VR + S+ K+ EV G
Sbjct: 294 PMFDQALSKYAMDAFKRQKIEIRTQHNIERVRPADGKLGSEYGELKLKIKQYGDKEVGAG 353
Query: 110 LLVWSTGVGPSTLVKSLD-----LPKSPGGR------------------IGIDEWLRV-- 144
L+VWSTG+ + L+K L +P SP R I +DE RV
Sbjct: 354 LVVWSTGLMANPLIKQLASKDFAVPISPEDRAEARRPKAKLATDARTGGILVDEHFRVRI 413
Query: 145 --------------PS------VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
P+ ++DVF +GD + +ES + LP AQVA +Q YL
Sbjct: 414 ETQTTDAAKGSEIVPTSSSNSLLRDVFVLGDAA-VIES--QRTLPKTAQVAAQQATYLAK 470
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
+LN+ + D++ F +R+ G M +G +KA+ +++ L G+
Sbjct: 471 VLNKANEG-------VIDVKDAPGFKFRNWGVMTYLGSWKAIHQGPRDE------LRGWA 517
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W++WRSAYL + +SWRNRF V + W ++VFGR ISR
Sbjct: 518 AWVLWRSAYLAKSMSWRNRFLVPIYWLVSWVFGRGISRF 556
>gi|420241063|ref|ZP_14745229.1| NADH dehydrogenase, FAD-containing subunit, partial [Rhizobium sp.
CF080]
gi|398072901|gb|EJL64094.1| NADH dehydrogenase, FAD-containing subunit, partial [Rhizobium sp.
CF080]
Length = 333
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 141/269 (52%), Gaps = 29/269 (10%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDF----IMRDVRQRYSHVKDYIHVTLIEAN-EIL 63
EEK LL V++GGGPTGVE +G +++ I RD R+ D++ V LIEA +IL
Sbjct: 56 EEKKALLTSVIIGGGPTGVEMAGAIAELGHFMIARDFRKLEP---DHMRVILIEAGPKIL 112
Query: 64 SSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
++F D L YA L K+GV ++ + + ++ ++ ++W GV S
Sbjct: 113 ATFPDNLTQYAMKALEKAGVEVMTNLAVESVTKDEVIAGSQRFRTSCVIWGAGVKASPSA 172
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
+ L + GGRI ++ L + D+FA+GD + L GK LPALAQVA++QG+YL
Sbjct: 173 RWLGIEGKAGGRIPVEPDLSITGFPDIFAIGDTALGLAEDGKP-LPALAQVAKQQGQYL- 230
Query: 184 SLLNRIGKAGGGRANSAK--DMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
G+A AK D + +PF + + G+ A IGR A+ D + +L
Sbjct: 231 -----------GKALRAKLLDGKPAEPFHFHNRGNTAVIGRDAAIFDFGK------WTLK 273
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
G L+W +W ++ +V++ R V+V W
Sbjct: 274 GRLAWFLWALVHVYLLVNFEKRLLVSVQW 302
>gi|164428890|ref|XP_956666.2| hypothetical protein NCU00153 [Neurospora crassa OR74A]
gi|157072325|gb|EAA27430.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 550
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 165/339 (48%), Gaps = 76/339 (22%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL 63
+++E+++ LLH +VGGGPTG+E++ EL D I D+ + Y + ++ +T+ + + ++L
Sbjct: 228 NLTDEDRANLLHFAIVGGGPTGIEYASELHDLIHDDLSKMYPDLLKFVRITVYDVSPKVL 287
Query: 64 SSFDDRLRHYATTQLSKSGVRL--------VRGIVKDVDSQ------KLILNDGTEVPYG 109
FD L YA + + + VR + S+ K+ EV G
Sbjct: 288 PMFDQALSKYAMDAFKRQKIEIRTQHNIERVRPADGKLGSEYGELKLKIKQYGDKEVGAG 347
Query: 110 LLVWSTGVGPSTLVKSLD-----LPKSPGGR------------------IGIDEWLRV-- 144
L+VWSTG+ + L+K L +P SP R I +DE RV
Sbjct: 348 LVVWSTGLMANPLIKQLASKDFAVPISPEDRAEARRPKAKLATDARTGGILVDEHFRVRI 407
Query: 145 --------------PS------VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
P+ ++DVF +GD + +ES + LP AQVA +Q YL
Sbjct: 408 ETQTTDAAKGSEIVPTSSSNSLLRDVFVLGDAA-VIES--QRTLPKTAQVAAQQATYLAK 464
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
+LN KA G D++ F +R+ G M +G +KA+ +++ L G+
Sbjct: 465 VLN---KANEG----VIDVKDAPGFKFRNWGVMTYLGSWKAIHQGPRDE------LRGWA 511
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W++WRSAYL + +SWRNRF V + W ++VFGR ISR
Sbjct: 512 AWVLWRSAYLAKSMSWRNRFLVPIYWLVSWVFGRGISRF 550
>gi|50556896|ref|XP_505856.1| YALI0F25135p [Yarrowia lipolytica]
gi|378548409|sp|F2Z699.1|NDH2_YARLI RecName: Full=External alternative NADH-ubiquinone oxidoreductase,
mitochondrial; AltName: Full=External alternative NADH
dehydrogenase; AltName: Full=NADH:ubiquinone reductase
(non-electrogenic); Flags: Precursor
gi|3718005|emb|CAA07265.1| alternative NADH-dehydrogenase [Yarrowia lipolytica]
gi|49651726|emb|CAG78667.1| YALI0F25135p [Yarrowia lipolytica CLIB122]
Length = 582
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 155/318 (48%), Gaps = 51/318 (16%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFD 67
E + RLLH VVVGGGPTGVEF+ EL DF D+R+ ++D VTL+EA +L SF
Sbjct: 271 EVRKRLLHTVVVGGGPTGVEFAAELQDFFEDDLRKWIPDIRDDFKVTLVEALPNVLPSFS 330
Query: 68 DRLRHYATTQLSKSGVR-LVRGIVKDVDSQ----KLILNDGT----EVPYGLLVWSTGVG 118
+L Y S + L + +VK VD + DGT E+PYG LVW+TG
Sbjct: 331 KKLIDYTEKTFSDEKISILTKTMVKSVDENVIRAEQTKGDGTKETLEMPYGTLVWATGNT 390
Query: 119 PSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
+V+ L +P G R G ++E+L V + ++A+GDCS T AQV
Sbjct: 391 VRPVVRELMSKIPAQKGSRRGLLVNEYLVVEGTEGIWALGDCSA-------TKYAPTAQV 443
Query: 175 AERQGKYLFSLLNRIGKAGG-------------------GRANSAKDMELGD-------- 207
A ++G YL +LLN I K R N +E
Sbjct: 444 ASQEGSYLANLLNGIAKTEDLNNEITNLEKQSEHTFDEQERKNIFAQLESKSRKLRRSRA 503
Query: 208 --PFVYRHLGSMATIGRYKALVDLRQNKES-KGLSLAGFLSWLVWRSAYLTRVVSWRNRF 264
PF Y H GS+A IG +A+ DL N S G +++ WRSAY++ S RN+
Sbjct: 504 MLPFEYSHQGSLAYIGSDRAVADLSFNFWGIMNWSSGGTMTYYFWRSAYVSMCFSMRNKI 563
Query: 265 YVAVNWATTFVFGRDISR 282
V ++W VFGRDISR
Sbjct: 564 LVCIDWMKVRVFGRDISR 581
>gi|255658997|ref|ZP_05404406.1| NADH dehydrogenase [Mitsuokella multacida DSM 20544]
gi|260848957|gb|EEX68964.1| NADH dehydrogenase [Mitsuokella multacida DSM 20544]
Length = 421
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 139/279 (49%), Gaps = 21/279 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--IHVTLIEAN-EILSS 65
E + R+L VVVGGGPTG+E SG L++ ++Q+ H D+ + V LIEA +L
Sbjct: 154 EVRRRMLTFVVVGGGPTGIEESGALTELF--GIQQKEFHNLDFSEVSVKLIEATANVLPM 211
Query: 66 FDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
LR +A L K GV ++ V D L L DGT +P ++W+ GV +K
Sbjct: 212 VAPNLREHAVKVLRKKGVDVMLNTQVVGYDGNDLKLKDGTTIPTQTVIWAAGVKAVPFIK 271
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
GGRI ++E L+V VFA+GDC+ Y T + LP +A VA +Q + +
Sbjct: 272 DCGGEVDRGGRIIVNEKLQVEGSDCVFAIGDCAHYQHGTERP-LPTVAPVAMQQAQ---T 327
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
+ I K G+ + A F Y+ LG+MATIGR +A+VD K + GF+
Sbjct: 328 AHDNIMKLIQGQQDLAT-------FHYKDLGAMATIGRGEAVVD----KTKINPQMTGFI 376
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W W +L R+ F VA+ W G + RI
Sbjct: 377 AWCAWMFVHLLRLAGAHANFTVAIKWTWNLFSGTRLGRI 415
>gi|83774750|dbj|BAE64873.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 559
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 153/338 (45%), Gaps = 74/338 (21%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L + E + LLH +VG GPTG E + L DFI +D+ Y +KD +TL + A +
Sbjct: 237 LPTTTPEMRKWLLHFAIVGAGPTGTELAASLRDFIYKDMTILYPALKDLPRITLYDVAPK 296
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-----VRGI---------VKDVDSQKLIL---NDGT 104
+LS FD+ L YA + K G+ + V G+ ++D ++ + +
Sbjct: 297 VLSMFDESLSKYAMETMKKEGIDIKTSHHVEGLRWGEPGAEPPYEMDPKRCLTITTKEEG 356
Query: 105 EVPYGLLVWSTGVG-----------------PSTLVKSLDLP-------------KSPG- 133
EV G+ VW TG STL+K P K+P
Sbjct: 357 EVGIGMCVWVTGNAMNKFVNKALQDVETFPTASTLLKDGTHPPPELTKDTTWHIKKAPKV 416
Query: 134 GRIGIDEWLRV---------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
G + +D LRV QDVFA+GD + + TG PA AQ ++ K+L +
Sbjct: 417 GALLVDGQLRVQLENADGKIAVYQDVFALGDNA--MPETGAP--PATAQATTQEAKWLAT 472
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
LN+ D++ PF + ++G++A IG AL+ + L G +
Sbjct: 473 RLNK------------GDLQTSQPFSFHNMGTLAYIGDANALMQFPTEDDKPPKYLTGRM 520
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
+W VW SAYLT +SWRN+ +A W +FGRD+SR
Sbjct: 521 AWFVWNSAYLTMSMSWRNKLRIAFRWLLNNIFGRDVSR 558
>gi|396485177|ref|XP_003842106.1| similar to external NADH-ubiquinone oxidoreductase [Leptosphaeria
maculans JN3]
gi|312218682|emb|CBX98627.1| similar to external NADH-ubiquinone oxidoreductase [Leptosphaeria
maculans JN3]
Length = 576
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 163/320 (50%), Gaps = 52/320 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
SEEEK RLLH VVVGGGPTGVEF+GEL DF D+++ +++ VTL+EA +L
Sbjct: 266 SEEEKKRLLHMVVVGGGPTGVEFAGELQDFFHSDLKKWLPEIQNDFKVTLVEALPNVLPM 325
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGTE----VPYGLLVWSTG 116
F +L Y + + + + +VK+V + + DG + +PYGLLVW+TG
Sbjct: 326 FSKQLIDYTEKTFKEETITIRTKTMVKNVTEKYIEAESAGPDGKKQVERIPYGLLVWATG 385
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+VK L +P R G ++E+L V ++V+AVGDC+ + + T A
Sbjct: 386 NALRPIVKDLINQIPAQKDSRRGLAVNEYLVVKGTENVWAVGDCA--VANYAPT-----A 438
Query: 173 QVAERQGKYLFSLLNRIGKAGGGRA---------NSAKDMELGD---------------- 207
QVA ++G +L + N++ K A D E D
Sbjct: 439 QVAAQEGAFLARMFNQMAKTEAIETELKELSVAQEKAPDKEARDKVFAEIKSLQQRLRRV 498
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG KA+ D+ + + ++ G ++++ WRSAYL+ S RNR
Sbjct: 499 KQLGPFEYSHQGSLAYIGSDKAVADI--SWFAGNIASGGTITYIFWRSAYLSMCFSTRNR 556
Query: 264 FYVAVNWATTFVFGRDISRI 283
V ++W FGRD+SR+
Sbjct: 557 ILVLLDWMKAKAFGRDVSRV 576
>gi|255720514|ref|XP_002556537.1| KLTH0H15708p [Lachancea thermotolerans]
gi|238942503|emb|CAR30675.1| KLTH0H15708p [Lachancea thermotolerans CBS 6340]
Length = 538
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/301 (36%), Positives = 167/301 (55%), Gaps = 33/301 (10%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILS 64
+S+ E+ RLL+ VVVGGGPTGVEF+ EL D+I +D+ + + +HVTL+EA IL+
Sbjct: 245 VSDPERKRLLNFVVVGGGPTGVEFAAELQDYIDQDLSKWMPELSKELHVTLVEALPNILN 304
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLIL---NDGTEVPYGLLVWSTGVGPS 120
FD L YA ++ + L +VK+V + +D ++PYG+LVW+TG P
Sbjct: 305 MFDKSLIKYAEDLFQETKINLRTNTMVKNVTPTVITAKCGDDIEDIPYGVLVWATGNAPR 364
Query: 121 TLVKSL-DLPKSPGGRIG--IDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVAE 176
+ KSL + + R G I+E L++ +D ++A+GDC+ Y + P AQVA
Sbjct: 365 EVSKSLMNRMECQNSRRGLLINEKLQLLGAEDSIWAIGDCTFY-----PGLFPT-AQVAH 418
Query: 177 RQGKYLFSLLNRIGKAGGGR------ANSAKDMELGD----------PFVYRHLGSMATI 220
++G+YL S+L + K + +N+A++ +L F Y H G++A I
Sbjct: 419 QEGEYLASVLKKQYKIDQLKWHTLQNSNAAENDKLKSKVEKLSSQIKAFKYNHHGALAYI 478
Query: 221 GRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
G KA+ DL + LAG ++L W+SAYL +S+RNR VA++W FGRD
Sbjct: 479 GSEKAIADLALGESM--YHLAGSFTFLFWKSAYLNMCLSFRNRLLVALDWCKVSFFGRDS 536
Query: 281 S 281
S
Sbjct: 537 S 537
>gi|189423289|ref|YP_001950466.1| NADH dehydrogenase (ubiquinone) [Geobacter lovleyi SZ]
gi|189419548|gb|ACD93946.1| NADH dehydrogenase (ubiquinone) [Geobacter lovleyi SZ]
Length = 405
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 140/269 (52%), Gaps = 22/269 (8%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEA-NEILSSFDD 68
K L+ V+VGGGPTGVEF+G L + + + + Y + + V L+EA +++L+S
Sbjct: 142 KRALMTFVIVGGGPTGVEFAGALIELVHFVLAKDYPELSTHAARVVLVEATDKLLASMPA 201
Query: 69 RLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
+ R Y +L V L+ V D +++ L+DG +P L WS GV + + +D
Sbjct: 202 KQRTYTLKKLRSMSVEVLLNARVVDAGPERVTLHDGAIIPAHTLFWSAGVKAAPIAAVID 261
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GGRI ++ L +P +VF +GD + YLE G + LP A VA + G Y
Sbjct: 262 VPHRAGGRIPVESDLTIPGHPEVFVIGDMA-YLEQEG-SALPMTAPVAMQMGIY------ 313
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+GKA + ++ PF Y GSMATIG+ A+ + G+ G+++WL
Sbjct: 314 -VGKAILAKERNSST----PPFRYCDKGSMATIGKNAAVAS------AFGMDFRGYMAWL 362
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVF 276
VW +L ++ +RNR V +NW + F
Sbjct: 363 VWLLLHLYYLIGFRNRIVVMLNWVWYYWF 391
>gi|357125352|ref|XP_003564358.1| PREDICTED: probable NADH-ubiquinone oxidoreductase C3A11.07,
mitochondrial-like [Brachypodium distachyon]
Length = 572
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 135/249 (54%), Gaps = 26/249 (10%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L ++EEE+ + +H VV+GGGPTGVEF+ EL DF+ D+ + Y VK Y+++++IEA +
Sbjct: 208 LPNLTEEERKKNVHFVVIGGGPTGVEFAAELHDFVNEDLAKLYPDVKKYVNISVIEAGDH 267
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDGT---EVPYGLLVWSTG 116
IL+ FD R+ H+A + + G+ L +VK D + N T VPYGL VWSTG
Sbjct: 268 ILTMFDKRITHFAEDKFKREGIDLKTNFKVVKVSDKTITMSNPATGEIAVPYGLAVWSTG 327
Query: 117 VGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+G ++ +D K G + DEWLRV +DV+A+GDC+ + + A+
Sbjct: 328 IGTRPII--MDFMKQVGQANRRVLATDEWLRVHGCEDVYALGDCATITQRKVMEDVDAIF 385
Query: 173 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFV-YRHLGSMATIGRYKALVDLRQ 231
+VA++ +G KD+ LGD +V Y + + K DL +
Sbjct: 386 RVADKDN------------SGTLTVKKIKDV-LGDIYVRYPQVELYLKTNQMKGFHDLLK 432
Query: 232 NKESKGLSL 240
+KES+ L++
Sbjct: 433 DKESEELNI 441
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 56/122 (45%), Gaps = 11/122 (9%)
Query: 167 VLPALAQVAERQGKYLFSLLNRIG-----KAGGGRANSAKDMELGDPFVYRHLGSMATIG 221
+LPA AQVA ++G YL NR+ G R A PF YRHLG A +G
Sbjct: 457 LLPATAQVAAQEGAYLADCFNRMNICEESPEGPLRIRGAGRHRF-KPFRYRHLGQFAPLG 515
Query: 222 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
+ L + G S WL W S Y ++ SWR R V +W F+FGRD S
Sbjct: 516 GEQTAAQLPGDWIHVGHST----QWL-WYSVYASKQFSWRTRMLVVSDWGRRFIFGRDSS 570
Query: 282 RI 283
+
Sbjct: 571 SL 572
>gi|433679660|ref|ZP_20511368.1| NADH dehydrogenase [Xanthomonas translucens pv. translucens DSM
18974]
gi|430815229|emb|CCP41967.1| NADH dehydrogenase [Xanthomonas translucens pv. translucens DSM
18974]
Length = 435
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 147/279 (52%), Gaps = 27/279 (9%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDD 68
++ L +VGGGPTGVE +G L++ ++ + + V LIEA +L+SF +
Sbjct: 156 RAAWLSFAIVGGGPTGVELAGTLAEIARHTLKHEFRRIDPAQAKVRLIEAGPRVLASFPE 215
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
RL A QL K GV ++ G+ V D+D+ L T VP +VW+ GV S L ++LD
Sbjct: 216 RLSAKAQKQLEKLGVDVLTGVPVADIDASGYRLGS-TFVPARTVVWAAGVAASPLGRTLD 274
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ + L +P +VF GD + ++ GK V P +A A++ G+++
Sbjct: 275 VPLDRSGRVQVQPDLSIPGHPEVFVAGDLAALQQADGKPV-PGVAPAAKQMGRHVAE--- 330
Query: 188 RIGKAGGGRANSAKDM--ELGD-PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
N AK + E GD PF Y G++ATIGR A+V L + L L+G L
Sbjct: 331 ----------NLAKRLRGEPGDAPFRYADYGNLATIGRMAAIVHLGR------LQLSGLL 374
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W W +A++ ++ +RNR V +NWA + + +RI
Sbjct: 375 AWWFWLAAHVFFLIGFRNRLVVLLNWAWAYWSYQRAARI 413
>gi|359793950|ref|ZP_09296680.1| NADH dehydrogenase [Mesorhizobium alhagi CCNWXJ12-2]
gi|359249814|gb|EHK53382.1| NADH dehydrogenase [Mesorhizobium alhagi CCNWXJ12-2]
Length = 443
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 145/272 (53%), Gaps = 27/272 (9%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDF----IMRDVRQRYSHVKDYIHVTLIEANE-IL 63
E + +LL VV+GGGPTGVE +G + + I+RD R S V L+EA++ +L
Sbjct: 177 ELRRKLLTFVVIGGGPTGVELAGAIVELARKAIVRDFRNIDSSTA---RVVLVEADKRLL 233
Query: 64 SSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
++F ++L A QL + GV + G V D + L+DG + ++W+ GV S
Sbjct: 234 TAFPEKLSDSAKRQLERLGVEVKLGAAVAACDGNGVALSDGQRIASACVLWAAGVMASRA 293
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
K LD+P GR+ +D+ L VP + V+ +GD + + G+ + P +A A++ G+Y+
Sbjct: 294 AKWLDVPSDRAGRVIVDDHLHVPGREGVYVIGDTACVKGTDGRPI-PGVAPAAKQMGRYV 352
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
L+ R G AG A PF Y G++ATIGR A+ D+ + +G
Sbjct: 353 AGLI-RAGLAGKPVA----------PFRYSDYGNLATIGRKAAVADVGR------FQFSG 395
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
FL+W +W A+L +V +RNR V ++WA +
Sbjct: 396 FLAWQLWSFAHLWFLVGFRNRIVVFLDWAWAY 427
>gi|310790145|gb|EFQ25678.1| hypothetical protein GLRG_00822 [Glomerella graminicola M1.001]
Length = 421
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 149/283 (52%), Gaps = 31/283 (10%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFD 67
+++ L+ +VGGG G+E + EL D ++R + H+ + +T+ + A ILS+FD
Sbjct: 160 QDRRDSLNIRIVGGGAVGLEAAAELWDLWFEELRFLFPHLDGELTITIHDVAPTILSTFD 219
Query: 68 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
RL YAT L VR++ ++ V++ + + +PYGLL+W+TG S LV L
Sbjct: 220 ARLSEYATRSLEGKQVRIMTSSHIERVEADAIYTKEDGRLPYGLLIWATGNKASPLVDRL 279
Query: 127 DLPKSPGG--RIGIDEWLRV-----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+ K G RI D++LRV ++D +A+GD + + G++ LP LA+VA ++G
Sbjct: 280 PVKKPEHGLPRILTDKYLRVLRPDGSPMEDAYALGDAA---DIEGES-LPTLAEVALQKG 335
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+YL +LN S D PF+Y+ +A +GR+ ++ RQ
Sbjct: 336 EYLTGVLN-----------SDDDSVRPAPFIYKQRALLAYLGRHDGVIAGRQE------- 377
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
G +W+ WRS L SWR + +A+ WA +V GRDI+R
Sbjct: 378 WTGASAWIAWRSGSLGWTRSWRRKIMIAIYWAFVWVAGRDIAR 420
>gi|190894007|ref|YP_001984301.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Rhizobium etli CIAT 652]
gi|190699668|gb|ACE93751.1| putative FAD-dependent pyridine nucleotide-disulphide
oxidoreductase protein [Rhizobium etli CIAT 652]
Length = 470
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 149/280 (53%), Gaps = 25/280 (8%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILS 64
SE EK LL +V+GGGPTGVE +G +S+ + + + +++ Y + V L+EA IL+
Sbjct: 166 SEPEKQALLTSIVIGGGPTGVEMAGAISELGRFMISRDFRNLQPYNLKVILVEAGPRILA 225
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+F + L YA + L GV + G V D+ + +G VP G ++W GV S
Sbjct: 226 AFPEHLSAYAKSYLENIGVEVRTGRRVMDIREDGAEI-EGEFVPAGSIIWGAGVKASPAH 284
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
L +P GGRI +D+ LRV D++A+GD S + GK +LP LAQVA++QG YL
Sbjct: 285 SWLGIPGLAGGRIPVDDHLRVLGFDDIYAIGDTSALTGADGK-LLPGLAQVAKQQGTYLG 343
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
L R+GKA G F +++ G+ A IGR A+ D + +L G
Sbjct: 344 KSL-RMGKAVSG-------------FKFKNRGNTAVIGRNAAVFDFGK------WTLKGR 383
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+WL+W ++ ++++ R VA+ W ++ + +RI
Sbjct: 384 AAWLLWALVHVYLLINFEKRLLVAIQWVGRYLTRQRGARI 423
>gi|50289709|ref|XP_447286.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526596|emb|CAG60223.1| unnamed protein product [Candida glabrata]
Length = 530
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/303 (34%), Positives = 167/303 (55%), Gaps = 37/303 (12%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
++ E+ RLL VVVGGGPTGVEF+ EL D++ +D+R+ + I +TL+EA IL+
Sbjct: 236 NDTERERLLSFVVVGGGPTGVEFAAELRDYVDQDLRKWMPELSKEIKITLVEALPNILNM 295
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLI--LNDGTE-VPYGLLVWSTGVGPST 121
FD +L YA + + L ++ +VK VDS K+ D TE +PYG+LVW+TG P
Sbjct: 296 FDKKLVTYAQDLFRQEKIDLRLKTMVKKVDSTKITAKCEDKTESIPYGVLVWATGNAPRD 355
Query: 122 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVAE 176
+ K L +P++ R G I+ +++ +D ++A+GDC+ Y + P AQVA
Sbjct: 356 VCKGLMQKIPETQNSRRGLLINSKMQLLGAEDSIYAIGDCTFY-----PGLFPT-AQVAH 409
Query: 177 RQGKYLFSLLNRIGKAG-----GGRANSAKD-------------MELGDPFVYRHLGSMA 218
++G+YL + ++ K + N K+ ++ D F Y H G++A
Sbjct: 410 QEGEYLARVFKKLHKVDQFEYMASKNNQTKENIKDLTSKINNLKAQIED-FQYNHHGALA 468
Query: 219 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
IG +A+ DL E+K LAG ++L W+ AYL +S++NR VA++W + GR
Sbjct: 469 YIGSEQAIADLAVG-EAK-YRLAGSFTFLFWKYAYLAMCMSFKNRILVAMDWTKAYFLGR 526
Query: 279 DIS 281
D S
Sbjct: 527 DTS 529
>gi|327294890|ref|XP_003232140.1| pyridine nucleotide-disulfide oxidoreductase [Trichophyton rubrum
CBS 118892]
gi|326465312|gb|EGD90765.1| pyridine nucleotide-disulfide oxidoreductase [Trichophyton rubrum
CBS 118892]
Length = 561
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 159/335 (47%), Gaps = 79/335 (23%)
Query: 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDRLRH 72
LLH +VG GPTG+E + L DFI D+ + Y +K+ I +TL + A +LS+FD+ L +
Sbjct: 239 LLHFAIVGAGPTGIELAASLCDFIHEDLVKVYPQLKEMIRITLFDVAPTVLSTFDESLSN 298
Query: 73 YATTQLSKSGVRLVRGI--------------VKDVDSQKLIL----NDGTEVPYGLLVWS 114
YA + + GV + ++D ++ + DG E + VW+
Sbjct: 299 YAMDTMEREGVDVKTNHHIESLRWGEPNSPGPHEMDPKRCLTIKTKEDGEEG-IAMCVWA 357
Query: 115 TG----------------VGPSTLVKSLDL------PKSPG----------GRIGIDEWL 142
TG S++++ +D P+S G + +D+ L
Sbjct: 358 TGNEMNEFVNDALGKVEAFPTSSVLEKMDHTPAERSPQSAATWSVRKAEKTGALLVDDHL 417
Query: 143 RVP---------SVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAG 193
RV ++QDVFA+GD + LE+ PA AQ A ++ +L LN
Sbjct: 418 RVRLQSNDGQTVTLQDVFAIGD-NCMLETNSP---PATAQSANQEAIWLAKCLNT----- 468
Query: 194 GGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS------LAGFLSWL 247
NS + F +R+LG +A +GR +AL+ Q+ + KG + L G+ +WL
Sbjct: 469 ---NNSDTGLSRYPAFSFRNLGMIAYVGRSRALMQFPQSSQDKGKASHLPQGLTGYAAWL 525
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
VW+ AYL+ +SWRNR + +W + VFGRDISR
Sbjct: 526 VWKGAYLSMSISWRNRLRILYSWISNRVFGRDISR 560
>gi|452002441|gb|EMD94899.1| hypothetical protein COCHEDRAFT_1090889 [Cochliobolus
heterostrophus C5]
Length = 577
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 153/349 (43%), Gaps = 93/349 (26%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 69
K +LL+ VVGGGPTG+EFS EL D I D+++ Y + Y +T+ + A ++L FD +
Sbjct: 246 KRQLLNFAVVGGGPTGIEFSAELHDLINEDLKKLYPELIQYHKITVYDVAEKVLPMFDKK 305
Query: 70 LRHYATTQLSKSGVRLVRG------------------IVKDVDSQKLILNDGTEVPYGLL 111
L YA + + G+ + V+D L + + E+ G+
Sbjct: 306 LADYAMQKFKREGIDIKTSHHVEELRAGAPVETSNSETVQDSHLYTLKVKEQGEIGVGMC 365
Query: 112 VWSTGV---------------GPSTLVKSLDL-----------PKSPGGRIGIDEWLRVP 145
VWSTG+ PS L+ + G I D LRV
Sbjct: 366 VWSTGLMQNPFVHTALSSVRSAPSNLITPSSSPSPSSIQWTVKKDAKSGSIITDSHLRVK 425
Query: 146 SVQ-------------------------------DVFAVGDCSGYLESTGKTVLPALAQV 174
V DVFA+GDC G +++T PA AQV
Sbjct: 426 LVPASSSSSSSSSSPADKDSTEAATADKTEAIHPDVFALGDC-GTIDATN---YPATAQV 481
Query: 175 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 234
A ++ +L LN+ +++ D G F YR LG++A IG + AL Q
Sbjct: 482 ASQKAVWLAKQLNK--------SSTLADSPKG--FTYRDLGTLAYIGNWNALF---QGGG 528
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G L G+++W++WR AY+TR VS RN+ V V W +VFGRDISR
Sbjct: 529 KWGGRLQGYVAWIIWRGAYITRTVSLRNKVLVPVYWVVNWVFGRDISRF 577
>gi|401626422|gb|EJS44369.1| nde2p [Saccharomyces arboricola H-6]
Length = 545
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 167/302 (55%), Gaps = 34/302 (11%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILS 64
+++ E+ RLL VVVGGGPTGVEF+ EL D++ +D+R+ + ++V LIEA IL+
Sbjct: 251 VNDPERKRLLTFVVVGGGPTGVEFAAELQDYVNQDLRKWMPDLSQEMNVILIEALPNILN 310
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL-ILNDGT---EVPYGLLVWSTGVGP 119
FD L YA ++ + L V VK V+S ++ L +G ++PYG+LVW+TG P
Sbjct: 311 MFDKTLIKYAEDLFARDEIDLQVNTAVKAVESTRIRTLQNGQKTDDIPYGMLVWATGNEP 370
Query: 120 STLVKSL--DLPKSPGGR-IGIDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVA 175
L K+L +P+ R + I++ L + ++ ++A+GDC+ + TG P AQVA
Sbjct: 371 IELSKTLMGRIPEQTNKRGLLINDKLELLGAENSIYAIGDCTAH---TG--FFPT-AQVA 424
Query: 176 ERQGKYLFSLLNR---IGKAGGGRANSAKDMELG-------------DPFVYRHLGSMAT 219
++G+YL +L++ I + N+A D + D F Y+H+G++A
Sbjct: 425 HQEGEYLAKILDKKLQINQLEWDMLNTADDTKASHLQKEINSMKSKLDKFNYKHMGALAY 484
Query: 220 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
IG A+ DL S L G ++L W+SAYL +S RN+ +A++W + GRD
Sbjct: 485 IGSETAIADLHMGDSS--YQLKGMFAFLFWKSAYLAMCLSIRNKILIAMDWTKVYFLGRD 542
Query: 280 IS 281
S
Sbjct: 543 SS 544
>gi|392586618|gb|EIW75954.1| NADH dehydrogenase [Coniophora puteana RWD-64-598 SS2]
Length = 520
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 116/326 (35%), Positives = 160/326 (49%), Gaps = 58/326 (17%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
G ++EEK RLLH VVVGGGPTGVE SGE+ D++ D+R Y + I +TL+EA
Sbjct: 206 FPGQTDEEKDRLLHIVVVGGGPTGVELSGEVHDWLEEDLRSWYPELAPRIRITLVEALPS 265
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILN-----------DGTEVPYG 109
+L F L Y + +S + ++ G +VK V + L +VP G
Sbjct: 266 VLPMFSKELIQYTESTFRESKIDVLTGTMVKGVTESSVRLKLGKEGDGKGEGREVDVPCG 325
Query: 110 LLVWSTGVGPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGK 165
++VW+ G + K L LP + R I ID++LR+ +D FA+GDC T
Sbjct: 326 VVVWAAGNTARQISKDLMAQLPDAQTNRRGIAIDDYLRLAGARDAFAIGDC------TAS 379
Query: 166 TVLPALAQVAERQGKYLFSLLNRIGK---------------AGGGRANSAKDMELG---- 206
+ P AQVA +QG YL L ++ K GG +A D E
Sbjct: 380 SYAPT-AQVASQQGAYLARLFKQLAKRDAIEARIAAVQGEGEGGESKVAAVDEEEKKLRK 438
Query: 207 -------DPFVYRHLGSMATIGRYKALVDLR---QNKESKGLSLAGFLSWLVWRSAYLTR 256
PF Y H GS+A IG KA+ DL +N S G++ ++L WRSAYL+
Sbjct: 439 QLDRVKLKPFQYSHQGSLAYIGSDKAIADLPIFGRNWASGGVA-----TYLFWRSAYLST 493
Query: 257 VVSWRNRFYVAVNWATTFVFGRDISR 282
+ S RNR VA +W +FGRD SR
Sbjct: 494 LFSLRNRTLVASDWLRVKLFGRDTSR 519
>gi|340345792|ref|ZP_08668924.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Candidatus Nitrosoarchaeum koreensis MY1]
gi|339520933|gb|EGP94656.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Candidatus Nitrosoarchaeum koreensis MY1]
Length = 452
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 147/289 (50%), Gaps = 35/289 (12%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSSFDD 68
+ LL V+VGGG G+E +GEL D ++ D R+ Y + KD I V ++EA IL F++
Sbjct: 162 RDSLLTFVIVGGGFAGIETAGELLDLLL-DARKHYPTIHKDDIRVIVLEALPMILPGFNE 220
Query: 69 RLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYG-------------LLVWS 114
+L +A ++ + G+ + +R V D ++ + E P L+W+
Sbjct: 221 KLADFAKEKMIQRGIEIKLRMAVTSFDGTEVSVKSLDENPKDSIDKSKINGIRTKTLIWT 280
Query: 115 TGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
GV P +K + K+ G+I ++++L VP VFA+GDC+ +++ AQ+
Sbjct: 281 AGVTPVNTIKR-SMFKTDKGKIIVNDFLEVPEFPGVFAIGDCALFMDPQTNRPFAPTAQI 339
Query: 175 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 234
AE Q K LN + K NS K+ FVY G MA IG+ +
Sbjct: 340 AEAQAKIAAHNLNALIK------NSEKE-----KFVYHSKGQMAIIGKRTGIATFL---- 384
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G++++GFL+WL+WR+ YL+++ S + + ++W + RDISR+
Sbjct: 385 --GMNISGFLAWLIWRNVYLSKIPSPDKKVRIFLDWIIDLFYDRDISRL 431
>gi|392563014|gb|EIW56194.1| FAD/NAD-P-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 548
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 159/312 (50%), Gaps = 41/312 (13%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
G S EE RLLH VVVGGGPTGVE SGEL DF+ D+R Y + + + ++L+EA
Sbjct: 245 FPGQSTEEIKRLLHMVVVGGGPTGVELSGELHDFLEEDLRSWYPELAENVRISLVEALPS 304
Query: 62 ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN--DGT--EVPYGLLVWSTG 116
+L F +L Y + ++ + L + +VK++ + ++L D T EVP GL+VW+ G
Sbjct: 305 VLPMFSKQLIDYTESTFKEAKIDILTKTMVKEIKDKSVVLQMPDKTVVEVPCGLVVWAAG 364
Query: 117 VGPSTLVKSL--DLPKSPGGRIGI--DEWLRVP-SVQDVFAVGDCSGYLESTGKTVLPAL 171
+ + L P R GI DE LR+ S +FA+GDCS T
Sbjct: 365 NTLRKVTRDLMSKFPDVQTNRRGITVDECLRMEGSNGSIFAIGDCSA-------TSYAPT 417
Query: 172 AQVAERQGKYLFSLLNRIGKAGGGRA-----NSAKDMELGD----------------PFV 210
AQVA ++G YL +L++I K A SA + E + PF
Sbjct: 418 AQVASQEGAYLARVLSQIAKKDELDARLKALQSASEPEAKEEQEQVQKRLAKLEKLRPFK 477
Query: 211 YRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
Y H GS+A IG KA+ DL + + G ++L WRS YL+ + S RNR VA +W
Sbjct: 478 YSHQGSLAYIGSDKAIADLPFF--NGNFASGGIATYLFWRSVYLSTLFSVRNRTLVATDW 535
Query: 271 ATTFVFGRDISR 282
+FGRD+SR
Sbjct: 536 LYVKLFGRDVSR 547
>gi|319788350|ref|YP_004147825.1| NADH dehydrogenase (ubiquinone) [Pseudoxanthomonas suwonensis 11-1]
gi|317466862|gb|ADV28594.1| NADH dehydrogenase (ubiquinone) [Pseudoxanthomonas suwonensis 11-1]
Length = 430
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 146/277 (52%), Gaps = 22/277 (7%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANE-ILSSFD 67
E++ L +VGGGPTGVE +G L++ +R ++ ++ V LIEA +L+SF
Sbjct: 157 ERAAWLEFAIVGGGPTGVELAGTLAEIARHTLRDQFRNINPATARVRLIEAGPRVLASFP 216
Query: 68 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
+ L A QL K GV + G+ V D+++ L D T V +VW+ GV S L +SL
Sbjct: 217 EDLSEKARRQLEKLGVEVSTGVPVTDINAGGYRLGD-TYVHSRTIVWAAGVAASPLARSL 275
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
+P GR+ ++ L VP ++F GD + ++ G V P +A A++ G++
Sbjct: 276 GVPLDRAGRVPVEPDLSVPGHPEIFVGGDLAAVEQADGSPV-PGVAPAAKQMGRH----- 329
Query: 187 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
+ +A R A PF YR G++ATIGR A+VD+ G+ L+G L+W
Sbjct: 330 --VARAIQARLQGAP----ARPFRYRDFGNLATIGRMAAVVDI------HGIRLSGVLAW 377
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W +A++ ++ +RNR V +NWA + + +RI
Sbjct: 378 WFWLAAHVFFLIGFRNRLVVLLNWAWAYWSYQRAARI 414
>gi|403414546|emb|CCM01246.1| predicted protein [Fibroporia radiculosa]
Length = 550
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 159/312 (50%), Gaps = 41/312 (13%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
G S++E +RLLH VVVGGGPTGVE SGE+ DF+ D+R Y + + + +TL+EA
Sbjct: 247 FPGQSQDEVNRLLHMVVVGGGPTGVEVSGEIHDFLEEDLRSWYPELANSVRITLVEALPS 306
Query: 62 ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDG----TEVPYGLLVWSTG 116
+L F +L Y + ++ + L + +VK++ + ++L EVP GL++W+ G
Sbjct: 307 VLPMFSKQLIDYTESTFKEAKIDILTKTMVKEIKEKSVVLQRPDKSIVEVPCGLVIWAAG 366
Query: 117 VGPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+ + L LP++ R + +D LR+ ++A+GDC+ T A
Sbjct: 367 NKLRKVTQDLMARLPQAQTNRRGVAVDAHLRMEGTDSIWAIGDCAA-------TSYAPTA 419
Query: 173 QVAERQGKYLFSLLNRIGK-----------AGGGRANSAK-----------DMELGDPFV 210
QVA +QG YL +L +I K G + K E PF
Sbjct: 420 QVASQQGAYLARILAQIAKRDNLEVRLKTLQDGPQTEETKPEIASIERQLVKTEKLRPFH 479
Query: 211 YRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
Y H GS+A IG KA+ DL + L+ G ++L WRSAYL+ + S RNR VA +W
Sbjct: 480 YSHQGSLAYIGSDKAIADL--PFFNGNLATGGVATFLFWRSAYLSTLFSLRNRTLVATDW 537
Query: 271 ATTFVFGRDISR 282
+FGRD+SR
Sbjct: 538 IKVKLFGRDVSR 549
>gi|328857353|gb|EGG06470.1| hypothetical protein MELLADRAFT_43514 [Melampsora larici-populina
98AG31]
Length = 568
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 156/303 (51%), Gaps = 36/303 (11%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
++ E RLLH VVVGGGPTGVE++ EL DF++ D+ Y + + +TLIEA +L
Sbjct: 274 ADHEVDRLLHMVVVGGGPTGVEYAAELHDFLVDDLSTWYPEIAGKVKITLIEALPNVLPM 333
Query: 66 FDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPS 120
F +L Y T + + L + +VK+V + ++ + E+PYGLLVW+TG
Sbjct: 334 FSKQLIDYTTQTFMSNRIEVLTKTMVKEVGPKTIMAQNEKKELIEIPYGLLVWATGNTSR 393
Query: 121 TLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
L + L LP+ + G +D+ LR+ ++A+GDC+ T AQ A
Sbjct: 394 DLTRKLMASLPEHQTQKRGLLVDDHLRLLGADGIYALGDCTA-------TAYAPTAQAAS 446
Query: 177 RQGKYLFSLLNRIGKAGG-----GRANSAKDMELGD------------PFVYRHLGSMAT 219
+QG+YL N++ K A + +++ D F Y H GS+A
Sbjct: 447 QQGQYLAKRFNQLAKVEKLEQHLEDAKQSSNVQEIDSITKTLSRNKLREFKYSHQGSLAY 506
Query: 220 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
IG KA+ DL + ++ G ++ WRSAY++ V S+RNRF V +W +FGRD
Sbjct: 507 IGSEKAIADLPFF--NGNIATGGVATFFFWRSAYVSMVFSFRNRFLVCTDWMKVKLFGRD 564
Query: 280 ISR 282
+SR
Sbjct: 565 VSR 567
>gi|118577016|ref|YP_876759.1| NADH dehydrogenase, FAD-containing subunit [Cenarchaeum symbiosum
A]
gi|118195537|gb|ABK78455.1| NADH dehydrogenase, FAD-containing subunit [Cenarchaeum symbiosum
A]
Length = 417
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 145/281 (51%), Gaps = 27/281 (9%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSSFDD 68
+ LL V+VGGG G+E +GE+ D ++ D R+ Y ++ KD V ++EA IL FD+
Sbjct: 135 RGTLLTFVIVGGGFAGIETAGEILDLLL-DARKHYPNIRKDDFSVVVLEALGAILPGFDE 193
Query: 69 RLRHYATTQLSKSGVRL-VRGIVKDVDSQKLI---LNDGTE--VPYGLLVWSTGVGPSTL 122
+L +A +L + G+ + +R V D ++ L+ G E + LVW+ GV P
Sbjct: 194 KLAKFAHEKLLEKGMDIRLRTAVSGFDGTEVSFKGLDGGGEDAIRTNTLVWTAGVTPVNT 253
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
+K L K+ G+I +D +L VP VFAVGDC+ ++ P AQ+AE QG+ +
Sbjct: 254 IKR-SLFKTEKGKIVVDGFLAVPEFPGVFAVGDCALSVDPGSGRPFPPTAQLAEAQGETV 312
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
L + + GG +A F ++ G MA IG+ + G ++AG
Sbjct: 313 AHNLQALIRGGGMKA-----------FTFKQKGQMAVIGKRTGIASFL------GANIAG 355
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
F +W +WR+ YL+++ R V ++W F RDI+R+
Sbjct: 356 FWAWFLWRNVYLSKIPRMEKRIRVLLDWTIDLFFDRDIARM 396
>gi|397737806|ref|ZP_10504471.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Rhodococcus sp. JVH1]
gi|396926538|gb|EJI93782.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Rhodococcus sp. JVH1]
Length = 463
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 147/280 (52%), Gaps = 33/280 (11%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSFD 67
E++RLL VVVG GPTGVE +G++++ R + YS+ +D V L A+ +L F
Sbjct: 162 ERARLLTFVVVGAGPTGVEMAGQIAELAHRTLVGAYSNFDPRDARIVLLDAASAVLPPFG 221
Query: 68 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILND--GTE--VPYGLLVWSTGVGPSTL 122
D L A L K GV + G V DVD+ L + D GTE + VWS GV S L
Sbjct: 222 DNLGSEAAETLEKLGVEVRLGASVTDVDADGLTVRDADGTEHRIESVCKVWSAGVAASPL 281
Query: 123 VKSL------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
+ L D+ ++ GR+ +DE L +P +VF VGD + LP +AQVA
Sbjct: 282 GRRLAEQSGADIDRA--GRVSVDEDLTLPGNPNVFVVGDM------MSRDRLPGVAQVAI 333
Query: 177 RQGKYLF-SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 235
+ G+Y + + AG GR ++ PF YR G+MATI R+ A+ +
Sbjct: 334 QGGRYAAKQIAAEVCAAGKGRPVPDRN-----PFRYRDKGAMATICRFNAVAKI------ 382
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
GL L GFL+W++W + ++ VV +R+R ++WA TF+
Sbjct: 383 GGLELTGFLAWIMWLAVHVVYVVGFRSRLVTLLSWAWTFL 422
>gi|389639362|ref|XP_003717314.1| hypothetical protein MGG_06276 [Magnaporthe oryzae 70-15]
gi|351643133|gb|EHA50995.1| hypothetical protein MGG_06276 [Magnaporthe oryzae 70-15]
gi|440465401|gb|ELQ34724.1| external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor
[Magnaporthe oryzae Y34]
gi|440480716|gb|ELQ61366.1| external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor
[Magnaporthe oryzae P131]
Length = 587
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 162/321 (50%), Gaps = 56/321 (17%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+ EE RLL VVVGGGPTGVEF+GEL+DF D+++ + D VTL+EA +L S
Sbjct: 277 TPEEIDRLLSVVVVGGGPTGVEFAGELADFFEEDIKKLIPEISDRFKVTLVEALPSVLPS 336
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL----ILNDGTE----VPYGLLVWSTG 116
F +L Y + L + + + + +V+ V + + DGT+ +PYGLLVW+TG
Sbjct: 337 FSKQLIEYTESTLKEEKINIETKTMVQKVTDKSVEATTTRPDGTKEKRVMPYGLLVWATG 396
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPA 170
LVK L +P R G ++E+L V +D++A+GDC +GY G T
Sbjct: 397 NAVRPLVKDLCARIPAQKDSRRGLAVNEYLVVQGARDIWAIGDCAVAGY----GPT---- 448
Query: 171 LAQVAERQGKYLFSLLNRIGKA-----------------GGGRANSAKDMELGD------ 207
AQVA ++G +L L N + RA + E+ +
Sbjct: 449 -AQVASQEGAFLARLFNNMAMTETLETKIQELSSSLNVKQADRAPAEVSAEIAEYERKLR 507
Query: 208 ------PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWR 261
PF Y H GS+A IG KA+ D+ + + G L++L WRSAYL+ S R
Sbjct: 508 RIKDIRPFKYSHQGSLAYIGSDKAVADI--SWLDGNFATGGRLTYLFWRSAYLSMCFSAR 565
Query: 262 NRFYVAVNWATTFVFGRDISR 282
NR V +W + +FGRD+SR
Sbjct: 566 NRILVINDWVKSKIFGRDVSR 586
>gi|218264304|ref|ZP_03478161.1| hypothetical protein PRABACTJOHN_03852 [Parabacteroides johnsonii
DSM 18315]
gi|218222141|gb|EEC94791.1| hypothetical protein PRABACTJOHN_03852 [Parabacteroides johnsonii
DSM 18315]
Length = 330
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 148/279 (53%), Gaps = 21/279 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSF 66
+EK L++ V+VGGG TGVE SG L++ + + Y +K +++ L+E + +L++
Sbjct: 56 KEKQALMNIVIVGGGATGVEISGVLAEMKHFVLPKDYPDLKQSEMNIFLVEGSPHLLAAM 115
Query: 67 DDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
+ +A + L GV+++ + V D K+IL+DG + +VW +GV + +
Sbjct: 116 SEEASVHAKSFLEGMGVKVILQKKVIDYKEGKVILDDGNSIETKTVVWVSGVTATQFEQI 175
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
+ GGRI ++E+ ++P Q+VFA+GD E+ P +AQVA +QG L
Sbjct: 176 ENKELGRGGRILVNEYNQLPGSQNVFAIGDVCLQTETNYPNGHPQVAQVAIQQGILLADN 235
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
L R+ K E PF Y++LG++AT+GR KA+ DL + + L GF +
Sbjct: 236 LKRLEKG-----------ETLKPFHYKNLGTLATVGRNKAVADLHK------IKLHGFFA 278
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWA-TTFVFGRDISRI 283
WLVW +L ++ +N+ V + W + F + + I I
Sbjct: 279 WLVWMGVHLRSILGVKNKIMVLIEWVWSYFTYDQSIRLI 317
>gi|424795163|ref|ZP_18221049.1| Putative NADH dehydrogenase [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422795593|gb|EKU24256.1| Putative NADH dehydrogenase [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 435
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 145/279 (51%), Gaps = 27/279 (9%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFDD 68
++ L +VGGGPTGVE +G L++ ++ + + V LIEA +L+SF +
Sbjct: 156 RAAWLSFAIVGGGPTGVELAGTLAEIARHTLKHEFRRIDPAEARVRLIEAGPRVLASFPE 215
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
RL A QL K GV ++ G+ V D+D+ L T VP +VW+ GV S L ++LD
Sbjct: 216 RLSAKAQRQLEKLGVEVLTGVPVADIDASGYRLGS-TFVPARTVVWAAGVAASPLARTLD 274
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ + L +P +V GD + + GK V P +A A++ G+++
Sbjct: 275 VPLDRSGRVQVQPDLSIPGHPEVCVAGDLAALQQPDGKPV-PGVAPAAKQMGRHVAE--- 330
Query: 188 RIGKAGGGRANSAKDM--ELGD-PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
N AK + E GD PF Y G++ATIGR A+V L + L L+G L
Sbjct: 331 ----------NLAKRLRGEAGDAPFSYADYGNLATIGRMAAIVHLGR------LQLSGLL 374
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W W +A++ ++ +RNR V +NWA + + +RI
Sbjct: 375 AWWFWLAAHVFFLIGFRNRLVVLLNWAWAYWSYQHAARI 413
>gi|423341343|ref|ZP_17319058.1| hypothetical protein HMPREF1077_00488 [Parabacteroides johnsonii
CL02T12C29]
gi|409221351|gb|EKN14301.1| hypothetical protein HMPREF1077_00488 [Parabacteroides johnsonii
CL02T12C29]
Length = 431
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 150/281 (53%), Gaps = 21/281 (7%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILS 64
+ +EK L++ V+VGGG TGVE SG L++ + + Y +K +++ L+E++ +L+
Sbjct: 155 NPKEKQALMNIVIVGGGATGVEISGVLAEMKHFVLPKDYPDLKQSEMNIFLVESSPHLLA 214
Query: 65 SFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+ + +A + L GV+++ + V D K+IL+DG + +VW +GV +
Sbjct: 215 AMSEEASVHAKSFLEGMGVKVILQKKVIDYKEGKVILDDGNSIETKTVVWVSGVTATRFE 274
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
+ + GGRI ++E+ ++P Q+VFA+GD E+ P +AQVA +QG L
Sbjct: 275 QIENKELGRGGRILVNEYNQLPGFQNVFAIGDVCLQTETNYPNGHPQVAQVAIQQGILLA 334
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
L R+ K E PF Y++LG++AT+GR KA+ DL + + L GF
Sbjct: 335 DNLKRLEKG-----------ETLKPFHYKNLGTLATVGRNKAVADLHK------IKLHGF 377
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWA-TTFVFGRDISRI 283
+WLVW +L ++ +N+ V + W + F + + I I
Sbjct: 378 FAWLVWMGVHLRSILGVKNKIMVLIEWVWSYFTYDQSIRLI 418
>gi|408371469|ref|ZP_11169234.1| NADH dehydrogenase [Galbibacter sp. ck-I2-15]
gi|407743059|gb|EKF54641.1| NADH dehydrogenase [Galbibacter sp. ck-I2-15]
Length = 435
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 147/273 (53%), Gaps = 23/273 (8%)
Query: 8 EEEKSRLLHC--VVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEA-NEIL 63
++ + R +H V++GGGPTGVE +G +++ R +R + +VK+ I + L+EA IL
Sbjct: 150 QDPQQRQMHLTYVIIGGGPTGVEMAGAIAEIAKRTMRNGFKNVKEEEIRIFLVEAAPNIL 209
Query: 64 SSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
+ F + L L + GV+++RG V ++ + L G+ + ++W+ G+ S L
Sbjct: 210 NGFPEPLGDKGKDMLEELGVKVLRGTPVVKIERDTVHLKVGS-IHSSNIIWAAGIKASPL 268
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
+ SL + + GR+ ++ L +P D+F +GD + + + +GK LPALA VA +QG YL
Sbjct: 269 LDSLQVEQDRLGRVFVNGDLSIPGYPDIFVLGDAAHFKDPSGKP-LPALASVARQQGIYL 327
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
G A K L F Y G+MATIG KA+ ++R GL +G
Sbjct: 328 ----------GKQLARKEKGNYLPPHFRYIDKGTMATIGTAKAVANIR------GLKFSG 371
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
F +W++W + ++ ++ +RNR V V W ++
Sbjct: 372 FFAWVLWSTIHILLLIGFRNRINVFVEWVWNYI 404
>gi|111024223|ref|YP_707195.1| NADH dehydrogenase [Rhodococcus jostii RHA1]
gi|110823753|gb|ABG99037.1| NADH dehydrogenase [Rhodococcus jostii RHA1]
Length = 463
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 147/280 (52%), Gaps = 33/280 (11%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSFD 67
E++RLL VVVG GPTGVE +G++++ R + YS+ +D V L A+ +L F
Sbjct: 162 ERARLLTFVVVGAGPTGVEMAGQIAELAHRTLVGAYSNFDPRDARIVLLDAASAVLPPFG 221
Query: 68 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILND--GTE--VPYGLLVWSTGVGPSTL 122
D L A L K GV + G V DVD+ L + D GTE + VWS GV S L
Sbjct: 222 DNLGSEAAETLEKLGVEVRLGASVTDVDADGLTVRDADGTEHRIESVCKVWSAGVAASPL 281
Query: 123 VKSL------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
+ L D+ ++ GR+ +DE L +P +VF VGD + LP +AQVA
Sbjct: 282 GRRLAEQSGADIDRA--GRVAVDEDLTLPGNPNVFVVGDM------MSRDRLPGVAQVAI 333
Query: 177 RQGKYLF-SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 235
+ G+Y + + A GR ++ PF YR G+MATI R++A+ +
Sbjct: 334 QGGRYAAKQIAAEVCAAAKGRPVPERN-----PFRYRDKGAMATICRFRAVAKI------ 382
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
GL L GFL+W++W + ++ VV +R+R ++WA TF+
Sbjct: 383 GGLELTGFLAWIMWLAVHVVYVVGFRSRLATLLSWAWTFL 422
>gi|161527520|ref|YP_001581346.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Nitrosopumilus maritimus SCM1]
gi|160338821|gb|ABX11908.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Nitrosopumilus maritimus SCM1]
Length = 451
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 144/288 (50%), Gaps = 34/288 (11%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSFDD 68
K LL VVVGGG G+E +GE+ D ++ DVR+ Y ++K + I V ++EA IL F +
Sbjct: 162 KHSLLTFVVVGGGFAGIETAGEIMDLLL-DVRKYYPNIKKEDIRVVVLEALPNILPGFSE 220
Query: 69 RLRHYATTQLSKSGVRLV-----------RGIVKDVDSQKLILNDG--TEVPYGLLVWST 115
L +A +L++ G+ + ++K +D K +D + + ++W+
Sbjct: 221 SLAKFAQEKLTEHGIEIKLQTAVTSFDGDEVMIKRLDVDKDASDDSVISSIQTKTVIWTA 280
Query: 116 GVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
GV P +K L K+ G+I +D+ L V VFA+GDC+ +++ + P AQ+A
Sbjct: 281 GVTPVNTIKR-SLFKTDKGKIIVDKNLEVNDFPGVFAIGDCALFMDPNSQRPFPPTAQIA 339
Query: 176 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 235
E Q K L+ + + E F Y G MA IG+ +
Sbjct: 340 EAQAKIAAKNLHALIRN-----------EEKTEFTYESKGQMAIIGKRTGIASFL----- 383
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G+++ G +W +WR+ YL+++ +W RF V ++W +F RDISR+
Sbjct: 384 -GMNIHGIFAWFLWRNIYLSKIPTWDKRFRVFLDWTADAIFDRDISRL 430
>gi|224014907|ref|XP_002297115.1| hypothetical protein THAPSDRAFT_38312 [Thalassiosira pseudonana
CCMP1335]
gi|220968234|gb|EED86583.1| hypothetical protein THAPSDRAFT_38312 [Thalassiosira pseudonana
CCMP1335]
Length = 469
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 160/320 (50%), Gaps = 50/320 (15%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQR---YSHVKDYIHVTLIEA-NEILS 64
EE+ R + VVGGGPTGVE SGEL DF + Y H++D + V LI +++L
Sbjct: 155 EERKRRVRIAVVGGGPTGVELSGELMDFFAQVCSLNDGAYQHLRDDVSVMLIHGGSDLLP 214
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL-ILNDGTE----VPYGLLVWSTGVG 118
+ D LR A L GV + + +++V + I G++ +P GL VW+ G
Sbjct: 215 AMDVDLRERALEALYNQGVEVRLNTRLQEVGRDYIKICEKGSDDVEFIPVGLTVWAAGNA 274
Query: 119 PSTLVKSL--DLPKSPGG---RIGIDEWLRVPS-VQDVFA----VGDCSGY-LESTGKT- 166
P VK L LP+S G RI +D WLR P+ QD F +GD + Y ES +T
Sbjct: 275 PVPFVKELLSQLPESAAGSAGRIHVDRWLRCPTRSQDTFGSIMVLGDVACYETESKYETE 334
Query: 167 --VLPALAQVAERQGKYLFSLLNR----------IGKAGGGRANS-------AKDMELGD 207
LP AQVA +QG + +LNR + + A+S + +E
Sbjct: 335 PEPLPQTAQVAGQQGAFAARMLNRGYDMRQTPPRLPELTSSEASSLLRVWLVTRGLEEAP 394
Query: 208 PFVYRHLGSMATIGRYKALVDLRQNKESKG----LSLAGFLSWLVWRSAYLTRVVSWRNR 263
F + LG +A IG+ +AL N+ G + +G +++ +WRS YL + S RN+
Sbjct: 395 GFNFLSLGLLAYIGKEEAL-----NQVMVGNVPIFNYSGKIAFALWRSVYLAKQASSRNQ 449
Query: 264 FYVAVNWATTFVFGRDISRI 283
+A +WA T FGRDI+R+
Sbjct: 450 ALIAFDWARTQSFGRDITRL 469
>gi|259485253|tpe|CBF82129.1| TPA: NADH dehydrogenase (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 516
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 154/347 (44%), Gaps = 92/347 (26%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L S E + LLH +VG GPTG E + L DFI D+ Y ++ ++L + A +
Sbjct: 194 LPSTSPEMRKHLLHFAIVGAGPTGTELAAALRDFITSDLITLYPTLEGLPRISLYDVAPK 253
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILN-----DGTEVPY-------- 108
+LS FD+ L YA + K G+ +V + I + G E PY
Sbjct: 254 VLSMFDESLSRYAQETMKKEGI--------EVQTSHHIQDLRWGAPGAEPPYQKDPRGCL 305
Query: 109 ------------GLLVWSTGVGPSTLVK-----------------------------SLD 127
G+ VW TG + L++ S
Sbjct: 306 TLTTKEEGQIGVGMCVWVTGNSMNELLRDSLRDVEVFPFNSAVMKDGTEVSKDASQGSWA 365
Query: 128 LPKSP-GGRIGIDEWLRV---------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
K+P G + +D LRV +QDVFA+GD + LE PA AQV +
Sbjct: 366 YKKAPRSGALLVDGHLRVQLENDTGATAVLQDVFAIGD-NAMLEGASP---PATAQVTAQ 421
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
+ K+L + LN+ +D++ PF +R++G++A IG KAL+ L N+E
Sbjct: 422 EAKWLATHLNQ------------RDLQSSPPFSFRNMGTLAYIGNEKALMQL-PNEERGY 468
Query: 238 LS--LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
L L G +WLVW SAYLT +SWRN+ VA W +FGRDISR
Sbjct: 469 LPQKLTGRTAWLVWNSAYLTMTISWRNKLRVAFRWMLNRLFGRDISR 515
>gi|433615682|ref|YP_007192477.1| NADH dehydrogenase, FAD-containing subunit [Sinorhizobium meliloti
GR4]
gi|429553929|gb|AGA08878.1| NADH dehydrogenase, FAD-containing subunit [Sinorhizobium meliloti
GR4]
Length = 438
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 139/276 (50%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDD 68
+ +LL VVGGGPTGVE +G +++ R + + + V L+EA E IL +
Sbjct: 174 RRKLLTFAVVGGGPTGVELAGAIAELSRRTIVHDFRRIDSSSARVVLVEAGERILPAMPP 233
Query: 69 RLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L A QL + GV +V G V D + L +GTE+ ++W+ GV S K +
Sbjct: 234 CLSRKAQRQLERLGVEIVFGNAVAGCDESGVRLANGTEIGSACILWAAGVMASRAAKWIG 293
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
GR+ +DE L P ++F +GD + +++ G+ V P +A A++ G+Y +
Sbjct: 294 AAADRAGRVIVDERLNPPGHDEIFVIGDTASVMDAAGRAV-PGVAPAAKQMGRYAADAIR 352
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
G G R+ PF YR G++ATIGR A+ D + K L+G+ +WL
Sbjct: 353 --GDMAGRRSA---------PFRYRDYGNLATIGRKAAVADFGKAK------LSGYPAWL 395
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W A+L +V +RNR V ++WA +V +R+
Sbjct: 396 AWNFAHLWFLVGFRNRLVVFLDWAVAYVRNDRTARL 431
>gi|393233215|gb|EJD40789.1| NADH dehydrogenase [Auricularia delicata TFB-10046 SS5]
Length = 542
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 159/307 (51%), Gaps = 37/307 (12%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEIL 63
G SE E RLLH VVVGGGPTGVE SGEL DF++ D++ Y + + +TLIEA +L
Sbjct: 243 GQSEAEIDRLLHMVVVGGGPTGVELSGELHDFLVDDLKYWYPELASRLRITLIEALPTVL 302
Query: 64 SSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDG----TEVPYGLLVWSTGVG 118
F +L Y + ++ + L + +VK++ +++ E+P+GLLVW+ G
Sbjct: 303 PMFSKQLISYTESTFKENQIDILTKTMVKEIKPNAVVVQKEDKSLVELPFGLLVWAGGNT 362
Query: 119 PSTLVKSL--DLPKSPGGR--IGIDEWLRVP-SVQDVFAVGDCSGYLESTGKTVLPALAQ 173
+ K+L L S GR + +D+ L V S +FA+GDC+ +T AQ
Sbjct: 363 ARPITKALMASLGASQAGRRGLAVDDHLCVAGSGGSIFALGDCT-------QTAYAPTAQ 415
Query: 174 VAERQGKYLFSLLNRIGKA-----------GGGRANSAKDMELG-------DPFVYRHLG 215
VA ++G YL ++ + G AK +E PF Y H G
Sbjct: 416 VASQEGAYLARQFAQMARKHALEQDLQVLRADGAEEDAKKVEASLARAGRFAPFHYSHQG 475
Query: 216 SMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
S+A IG +A+ DL + L+ G ++L WRSAY++ + S RNR VA +W T +
Sbjct: 476 SLAYIGSDRAIADLPLFG-AGNLATGGVATYLFWRSAYISTLFSLRNRVLVATDWLATKL 534
Query: 276 FGRDISR 282
FGRD+SR
Sbjct: 535 FGRDVSR 541
>gi|239613720|gb|EEQ90707.1| alternative NADH-dehydrogenase [Ajellomyces dermatitidis ER-3]
Length = 614
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 161/319 (50%), Gaps = 52/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
++EE RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTL+EA +L +
Sbjct: 304 TKEEVKRLLHMVVVGGGPTGVEFAGELQDFFNDDLKKWVPEITDNFKVTLVEALPNVLPT 363
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGTE----VPYGLLVWSTG 116
F +L Y + + + + + +VK V + + DGT+ +PYGLLVW+TG
Sbjct: 364 FSKQLIDYTESTFKEEAITIRTKTMVKKVSDKYIEAESTNPDGTKEMETIPYGLLVWATG 423
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L +P R G ++E+L V ++++AVGDC+ T A
Sbjct: 424 NTVRGVVRDLMSQIPAQKNSRRGLAVNEYLVVNGTENIWAVGDCA-------VTNYAPTA 476
Query: 173 QVAERQGKYLFSLLNRIGKAGG----------GRANSAKDMELGD--------------- 207
QVA ++G +L L N + K +A + + E
Sbjct: 477 QVASQEGAFLARLFNTMAKTAAIEDELKALSKAQAEAPTEEERNKVLDEIRNLQRTLRRT 536
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG+ +A+ D+ + S ++ G L++L WRS YL+ S RNR
Sbjct: 537 KQIGPFQYSHQGSLAYIGKERAVADV--SWLSGNIASGGTLTYLFWRSVYLSMCFSTRNR 594
Query: 264 FYVAVNWATTFVFGRDISR 282
VA +W +FGRD+SR
Sbjct: 595 VLVAFDWIKAKMFGRDVSR 613
>gi|419962368|ref|ZP_14478361.1| NADH dehydrogenase [Rhodococcus opacus M213]
gi|414572315|gb|EKT83015.1| NADH dehydrogenase [Rhodococcus opacus M213]
Length = 463
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 147/281 (52%), Gaps = 33/281 (11%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSF 66
+E++RLL VVVG GPTGVE +G++++ R + YS+ +D V L A+ +L F
Sbjct: 161 QERARLLTFVVVGAGPTGVEMAGQIAELAHRTLVGAYSNFDPRDARIVLLDAASAVLPPF 220
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILND--GTE--VPYGLLVWSTGVGPST 121
D L A L K GV + G V DVD+ L + D GTE + VWS GV S
Sbjct: 221 GDNLGSEAAETLEKLGVEVRLGASVTDVDAGGLTVRDADGTEHRIESVCKVWSAGVAASP 280
Query: 122 LVKSL------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
L + L D+ ++ GR+ +DE L +P +VF VGD + LP +AQVA
Sbjct: 281 LGRRLAEQSGADIDRA--GRVAVDEDLTLPGNPNVFVVGDM------MSRDRLPGVAQVA 332
Query: 176 ERQGKYLF-SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 234
+ G+Y + + A GR + PF YR GSMATI R+ A+ ++
Sbjct: 333 IQGGRYAAKQIAAEVTAAAKGRPAPERT-----PFRYRDKGSMATICRFNAVAEI----- 382
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
GL + GFL+W++W + ++ VV +R+R ++WA TF+
Sbjct: 383 -GGLEVTGFLAWIMWLAVHVVYVVGFRSRLATLLSWAWTFL 422
>gi|224013642|ref|XP_002296485.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968837|gb|EED87181.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 445
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 153/303 (50%), Gaps = 53/303 (17%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L ++EE+ R L V+VG GPTG+EF+ EL DFI D + Y Y+ + ++E A
Sbjct: 170 LPNLTEEDMERELTFVIVGAGPTGIEFAAELLDFIESDGPRYYKDRLKYVRIKVVEAAPS 229
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVG-- 118
IL F+D ++ A RL R I ++ V S + +PYG+ +W+ G+G
Sbjct: 230 ILRPFEDGMKEEAIR-------RLTRTIKIQGVGS----IQPCERIPYGMSLWAAGIGQL 278
Query: 119 --PSTLVKSL------DLPKSPGGRIGIDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLP 169
S+LV+ L + + GR+ +D WLRV +FA+GDCS + ST +LP
Sbjct: 279 PITSSLVEELKGTEQTNAQQYARGRLAVDPWLRVLGGDGKIFALGDCS-CISST--PMLP 335
Query: 170 ALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKAL--V 227
A AQVA +QG++L LL+R + PF + LG +A G AL V
Sbjct: 336 ATAQVAAQQGEFLGKLLSR---------------DYPPPFQFLDLGILAYTGSGSALAQV 380
Query: 228 DLRQNKESKG---------LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
+ K+ G L + G L + +WR+ YL + S++N VA++W +FGR
Sbjct: 381 QIAPGKDLPGANENWSPVRLQIKGSLGFGLWRTIYLLKQTSFKNVVLVALDWVKVNLFGR 440
Query: 279 DIS 281
DIS
Sbjct: 441 DIS 443
>gi|327350106|gb|EGE78963.1| alternative NADH-dehydrogenase [Ajellomyces dermatitidis ATCC
18188]
Length = 587
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 161/319 (50%), Gaps = 52/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
++EE RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTL+EA +L +
Sbjct: 277 TKEEVKRLLHMVVVGGGPTGVEFAGELQDFFNDDLKKWVPEITDNFKVTLVEALPNVLPT 336
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGTE----VPYGLLVWSTG 116
F +L Y + + + + + +VK V + + DGT+ +PYGLLVW+TG
Sbjct: 337 FSKQLIDYTESTFKEEAITIRTKTMVKKVSDKYIEAESTNPDGTKEMETIPYGLLVWATG 396
Query: 117 VGPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L +P R + ++E+L V ++++AVGDC+ T A
Sbjct: 397 NTVRGVVRDLMSQIPAQKNSRRGLAVNEYLVVNGTENIWAVGDCA-------VTNYAPTA 449
Query: 173 QVAERQGKYLFSLLNRIGKAGG----------GRANSAKDMELGD--------------- 207
QVA ++G +L L N + K +A + + E
Sbjct: 450 QVASQEGAFLARLFNTMAKTAAIEDELKALSKAQAEAPTEEERNKVLDEIRNLQRTLRRT 509
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG+ +A+ D+ + S ++ G L++L WRS YL+ S RNR
Sbjct: 510 KQIGPFQYSHQGSLAYIGKERAVADV--SWLSGNIASGGTLTYLFWRSVYLSMCFSTRNR 567
Query: 264 FYVAVNWATTFVFGRDISR 282
VA +W +FGRD+SR
Sbjct: 568 VLVAFDWIKAKMFGRDVSR 586
>gi|261193911|ref|XP_002623361.1| alternative NADH-dehydrogenase [Ajellomyces dermatitidis SLH14081]
gi|239588966|gb|EEQ71609.1| alternative NADH-dehydrogenase [Ajellomyces dermatitidis SLH14081]
Length = 587
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 161/319 (50%), Gaps = 52/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
++EE RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTL+EA +L +
Sbjct: 277 TKEEVKRLLHMVVVGGGPTGVEFAGELQDFFNDDLKKWVPEITDNFKVTLVEALPNVLPT 336
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGTE----VPYGLLVWSTG 116
F +L Y + + + + + +VK V + + DGT+ +PYGLLVW+TG
Sbjct: 337 FSKQLIDYTESTFKEEAITIRTKTMVKKVSDKYIEAESTNPDGTKEMETIPYGLLVWATG 396
Query: 117 VGPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L +P R + ++E+L V ++++AVGDC+ T A
Sbjct: 397 NTVRGVVRDLMSQIPAQKNSRRGLAVNEYLVVNGTENIWAVGDCAV-------TNYAPTA 449
Query: 173 QVAERQGKYLFSLLNRIGKAGG----------GRANSAKDMELGD--------------- 207
QVA ++G +L L N + K +A + + E
Sbjct: 450 QVASQEGAFLARLFNTMAKTAAIEDELKALSKAQAEAPTEEERNKVLDEIRNLQRTLRRT 509
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG+ +A+ D+ + S ++ G L++L WRS YL+ S RNR
Sbjct: 510 KQIGPFQYSHQGSLAYIGKERAVADV--SWLSGNIASGGTLTYLFWRSVYLSMCFSTRNR 567
Query: 264 FYVAVNWATTFVFGRDISR 282
VA +W +FGRD+SR
Sbjct: 568 VLVAFDWIKAKMFGRDVSR 586
>gi|384106164|ref|ZP_10007074.1| NADH dehydrogenase [Rhodococcus imtechensis RKJ300]
gi|383834355|gb|EID73797.1| NADH dehydrogenase [Rhodococcus imtechensis RKJ300]
Length = 463
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 147/281 (52%), Gaps = 33/281 (11%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSF 66
+E++RLL VVVG GPTGVE +G++++ R + YS+ +D V L A+ +L F
Sbjct: 161 QERARLLTFVVVGAGPTGVEMAGQIAELAHRTLVGAYSNFDPRDARIVLLDAASAVLPPF 220
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILND--GTE--VPYGLLVWSTGVGPST 121
D L A L K GV + G V DVD+ L + D GTE + VWS GV S
Sbjct: 221 GDNLGSEAAETLEKLGVEVRLGASVTDVDAGGLTVRDADGTEHRIESVCKVWSAGVAASP 280
Query: 122 LVKSL------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
L + L D+ ++ GR+ +DE L +P +VF VGD + LP +AQVA
Sbjct: 281 LGRRLAEQSGADIDRA--GRVAVDEDLTLPGNPNVFVVGDM------MSRDRLPGVAQVA 332
Query: 176 ERQGKYLF-SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 234
+ G+Y + + A GR + PF YR GSMATI R+ A+ ++
Sbjct: 333 IQGGRYAAKQIAAEVTAAAKGRPAPERT-----PFRYRDKGSMATICRFNAVAEI----- 382
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
GL + GFL+W++W + ++ VV +R+R ++WA TF+
Sbjct: 383 -GGLEVTGFLAWIMWLAVHVVYVVGFRSRLATLLSWAWTFL 422
>gi|317156780|ref|XP_001826007.2| hypothetical protein AOR_1_604054 [Aspergillus oryzae RIB40]
Length = 1492
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 153/338 (45%), Gaps = 74/338 (21%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L + E + LLH +VG GPTG E + L DFI +D+ Y +KD +TL + A +
Sbjct: 1170 LPTTTPEMRKWLLHFAIVGAGPTGTELAASLRDFIYKDMTILYPALKDLPRITLYDVAPK 1229
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-----VRGI---------VKDVDSQKLIL---NDGT 104
+LS FD+ L YA + K G+ + V G+ ++D ++ + +
Sbjct: 1230 VLSMFDESLSKYAMETMKKEGIDIKTSHHVEGLRWGEPGAEPPYEMDPKRCLTITTKEEG 1289
Query: 105 EVPYGLLVWSTGVG-----------------PSTLVKSLDLP-------------KSPG- 133
EV G+ VW TG STL+K P K+P
Sbjct: 1290 EVGIGMCVWVTGNAMNKFVNKALQDVETFPTASTLLKDGTHPPPELTKDTTWHIKKAPKV 1349
Query: 134 GRIGIDEWLRV---------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
G + +D LRV QDVFA+GD + + TG PA AQ ++ K+L +
Sbjct: 1350 GALLVDGQLRVQLENADGKIAVYQDVFALGDNA--MPETGAP--PATAQATTQEAKWLAT 1405
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
LN+ D++ PF + ++G++A IG AL+ + L G +
Sbjct: 1406 RLNK------------GDLQTSQPFSFHNMGTLAYIGDANALMQFPTEDDKPPKYLTGRM 1453
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
+W VW SAYLT +SWRN+ +A W +FGRD+SR
Sbjct: 1454 AWFVWNSAYLTMSMSWRNKLRIAFRWLLNNIFGRDVSR 1491
>gi|39995601|ref|NP_951552.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase family
protein [Geobacter sulfurreducens PCA]
gi|409911058|ref|YP_006889523.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase family
protein [Geobacter sulfurreducens KN400]
gi|39982364|gb|AAR33825.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase family
protein [Geobacter sulfurreducens PCA]
gi|298504621|gb|ADI83344.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase family
protein [Geobacter sulfurreducens KN400]
Length = 419
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 141/276 (51%), Gaps = 34/276 (12%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEA-NE 61
++ L+ V+VGGGPTGVEF+G L + + RY KDY V L+EA +
Sbjct: 149 KRRALMTFVIVGGGPTGVEFAGALIELV------RYVLTKDYPELSVQAARVVLVEAFDR 202
Query: 62 ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120
+L++ L+ Y +L GV L+ V D +++ L+DG +P L WS GV +
Sbjct: 203 LLAAMPAELQGYTLEKLRGMGVEVLLNARVVDAGPERVTLHDGAVIPAHTLFWSAGVKAA 262
Query: 121 TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGK 180
L +L + ++PGGRI ++ L +P DV+ VGD + +LE G LP +A VA + G
Sbjct: 263 PLAATLGVEQNPGGRIAVEPDLTLPGHPDVYVVGDMA-WLEQDGAP-LPMVAPVAMQMGI 320
Query: 181 YLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 240
+ GK+ R A PF Y GSMATIGR A+ + G++L
Sbjct: 321 H-------AGKSILAREQGAP----APPFRYHDKGSMATIGRSAAVAS------AFGMNL 363
Query: 241 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 276
G+ +W+ W +L ++ +RNR V +NW + F
Sbjct: 364 RGYAAWIAWLLLHLYYLIGFRNRIVVMLNWIWYYWF 399
>gi|421076594|ref|ZP_15537576.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans JBW45]
gi|392525206|gb|EIW48350.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans JBW45]
Length = 418
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 148/278 (53%), Gaps = 22/278 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSF 66
+++ LL V+VGGGPTGVE +G LS+ I + + Y H+ + + L+EA +++L++
Sbjct: 156 DKRRALLTFVIVGGGPTGVESAGALSELIYHVMIREYHHLNFKEVRIMLVEASDKLLATM 215
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
+ LR L + V + + V D D +K+ L G +P +VW+ GV S L+ +
Sbjct: 216 PEELREVTVETLIRKHVEVRMCVQVTDYDGEKMSLKGGEVIPTNTVVWAAGVKASALMDT 275
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
LD+ ++ R ++++L++P+ +VF +GD + Y++ G+ LP +A VA +Q
Sbjct: 276 LDVEQASMRRAIVNDFLQLPNRPEVFVIGDAAHYVQ--GERPLPMIAPVAIQQADI---- 329
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
N + EL FVY+ +G+MATIGR A+V + K GF++
Sbjct: 330 ------TAKNIRNLIRGKEL-KKFVYKDVGNMATIGRNAAVVHMGAFKTH------GFIA 376
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W +W ++ R++ +RNR V V W ++ + RI
Sbjct: 377 WSIWSLVHILRLIDFRNRAVVFVKWMWDYLVYERVVRI 414
>gi|407929805|gb|EKG22615.1| hypothetical protein MPH_00083, partial [Macrophomina phaseolina
MS6]
Length = 275
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 151/290 (52%), Gaps = 33/290 (11%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L ++ + LLH +VGGG G+E + EL D D+R Y H+ + +T+ + A +
Sbjct: 8 LPTVAPPRQRDLLHIRIVGGGAIGIEAAAELWDCWHEDLRHVYPHLDGKLAITIHDVAPQ 67
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120
IL +FD L YAT L V L ++ V+ ++ + +P+G+L+W+TG S
Sbjct: 68 ILGTFDASLSEYATKSLEGKQVELKTSNHIERVERDHIVTKEDGRLPFGMLIWATGNKAS 127
Query: 121 TLVKSLDLPKSPGG---RIGIDEWLRV-----PSVQDVFAVGDCSGYLESTGKTVLPALA 172
L++ + + P R+ D++LRV ++ V+A+GD +G +E LP LA
Sbjct: 128 PLIEEMQGVRKPAKGLPRLLTDKYLRVLREDGEPIEGVYALGD-AGDIEGES---LPTLA 183
Query: 173 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 232
+VA ++G+YL LN+ G G+ + PF Y+ +A +GR+ ++ R+
Sbjct: 184 EVALQKGEYLVDQLNK----GDGQPDR--------PFEYKQRALLAYLGRHDGVIGGRE- 230
Query: 233 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
E GLS +WL WRS L SWR + ++++W ++ GRDI+R
Sbjct: 231 -EWTGLS-----AWLAWRSGSLAWTRSWRRKIMISISWLFVWLGGRDIAR 274
>gi|410076710|ref|XP_003955937.1| hypothetical protein KAFR_0B05060 [Kazachstania africana CBS 2517]
gi|372462520|emb|CCF56802.1| hypothetical protein KAFR_0B05060 [Kazachstania africana CBS 2517]
Length = 529
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 167/289 (57%), Gaps = 30/289 (10%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 69
+ +LL VVVGGGPTGVEF+ ELSD+I +D+ + +++ I +TL+E A IL SF+
Sbjct: 252 RKKLLSFVVVGGGPTGVEFAAELSDYIQQDINKWQPELQNDISITLVEAAPNILPSFNKE 311
Query: 70 LRHYATTQLSKSG-VRL-VRGIVKDVDS---QKLILNDGTE----VPYGLLVWSTGVGPS 120
L YA LS G ++L + IVK+VDS + LI ++ +PYG+LVW+TG P
Sbjct: 312 LIQYAEELLSSKGKIQLKLNTIVKEVDSNYLKGLIKEQNSDHMEHIPYGVLVWATGNAPR 371
Query: 121 TLVKSL-DLPKSPGGRIG--IDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPAL---AQ 173
+ +SL K R G I++ L++ +D +FA+GDC T P L AQ
Sbjct: 372 DICQSLMSKLKQQDSRRGLLINDKLQLLGAEDSIFAIGDC---------TFHPGLFPTAQ 422
Query: 174 VAERQGKYLFSLLNRIGKAGG-GRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 232
VA ++GKYL ++ R+ K + +E+ D F Y++ G++A IG+ KA+ D+
Sbjct: 423 VASQEGKYLANIFKRLHKIERLAFEKKIRKIEIPD-FKYKYKGALAYIGQDKAIADVVT- 480
Query: 233 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
K AG L++ W+SAYLT + S+RN+ VA++W +FGR+ S
Sbjct: 481 -FGKTYPSAGSLTFYFWKSAYLTMLSSFRNKILVALDWTKVSMFGRNSS 528
>gi|430004522|emb|CCF20321.1| Putative transmembrane respiratory NADH-dehydrogenase (Putative
Ubiquinone reductase); PNDR family protein [Rhizobium
sp.]
Length = 438
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 140/267 (52%), Gaps = 25/267 (9%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDF----IMRDVRQRYSHVKDYIHVTLIEAN-EIL 63
EEK LL VV+GGGPTGVE +G +++ I RD R+ ++ V L+EA IL
Sbjct: 161 EEKQALLTSVVIGGGPTGVEMAGAIAELGHFMISRDFRRLQP---EHFRVILVEAGPRIL 217
Query: 64 SSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
S+F + L YA +L K+GV ++ + + S+++++ G + G ++W GV S
Sbjct: 218 SAFPEELADYARKELEKAGVEVLTNLPVESISKEVVVAGGRSIRTGSVIWGAGVKASPAA 277
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
L + GGRI ++ L V DV++VGD + L GK LPALAQVA++QG+YL
Sbjct: 278 LWLGIEGKAGGRIPVNPDLSVTGHPDVYSVGDTALGLAEDGKP-LPALAQVAKQQGEYL- 335
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
GKA R + E PF + G+ A IGR A+ D + + L G
Sbjct: 336 ------GKALRLRLTQGRQPE---PFRFNERGNTAVIGRNAAIFDFGKRR------LKGR 380
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+W +W ++ +V++ R V++ W
Sbjct: 381 FAWFLWAIVHVYLLVNFEKRLLVSIQW 407
>gi|359407101|ref|ZP_09199734.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella stercorea
DSM 18206]
gi|357553629|gb|EHJ35375.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella stercorea
DSM 18206]
Length = 449
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 146/291 (50%), Gaps = 30/291 (10%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVT 55
L +EEE+ LL+ V+VGGG TGVE +G L++ +RY DY +H+
Sbjct: 151 LTCATEEERQELLNVVIVGGGATGVEIAGALAEM------RRYVIPYDYPDMDSSLMHIY 204
Query: 56 LIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVW 113
LIEA + +L+ A L GV + G +V D K+++ DGTE+P +W
Sbjct: 205 LIEAGDRLLAGLSQESSQKAYEFLKSMGVDIQFGKMVTDYRDHKVVMKDGTEIPTRTFLW 264
Query: 114 STGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALA 172
+G+ + + + G R +DE+ R+ V DVFA+GD C ++ P +A
Sbjct: 265 VSGIRANAMPGIDESRLGRGFRFKVDEFNRIQGVDDVFAIGDQCLQTSDAAYPNGHPQVA 324
Query: 173 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 232
QVA +Q K L L I + A +A F Y++LGSMATIGR KA+V++ +
Sbjct: 325 QVAIQQAKNLAKNLKLINQGADSNALTA--------FHYKNLGSMATIGRNKAVVEIGKF 376
Query: 233 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ GF +W++W +L ++ +N+ V +NW +V D R+
Sbjct: 377 RSQ------GFFAWVLWLVVHLRSILGVKNKMMVLLNWLWKYVSYNDSIRM 421
>gi|116207468|ref|XP_001229543.1| hypothetical protein CHGG_03027 [Chaetomium globosum CBS 148.51]
gi|88183624|gb|EAQ91092.1| hypothetical protein CHGG_03027 [Chaetomium globosum CBS 148.51]
Length = 580
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 164/319 (51%), Gaps = 54/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
S EE +RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L
Sbjct: 272 SPEEINRLLHMVVVGGGPTGVEFAGELQDFFEEDIKKLVPEIADRFRVTLIEALPNVLPM 331
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTG 116
F +L Y + + + + + +VK V + ++ DG + PYGLLVW+TG
Sbjct: 332 FSKQLIDYTESTFKEEKIDIHTKTMVKKVTDKTVEAEVTRPDGKKETIVFPYGLLVWATG 391
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPA 170
++K L +P R G ++E+L V +D++AVGDC +GY +
Sbjct: 392 NAVRPVIKDLISRIPAQANSRRGLAVNEYLVVQGTRDIWAVGDCAVAGYAPT-------- 443
Query: 171 LAQVAERQGKYLFSLLNRI-------GKAG----------GGRANSAKDMEL-------- 205
AQVA ++G +L L N + GK G A ++++E
Sbjct: 444 -AQVAGQEGTFLARLFNNMAMTEALEGKISELSSSLNLQPGNAAAVSREIESYERQLRRI 502
Query: 206 --GDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG KA+ D+ + ++ AG L++L WRSAY++ S RNR
Sbjct: 503 KDAKPFHYSHQGSLAYIGSDKAVADV--TWFNGNVAAAGSLTYLFWRSAYISMCFSTRNR 560
Query: 264 FYVAVNWATTFVFGRDISR 282
V +W + VFGRD+SR
Sbjct: 561 LLVINDWLKSKVFGRDLSR 579
>gi|393723305|ref|ZP_10343232.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Sphingomonas sp. PAMC 26605]
Length = 471
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 143/265 (53%), Gaps = 21/265 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSF 66
EE++ L ++VGGGPTGVE +G +++ + ++ + + + LIEA + +L++F
Sbjct: 161 EERAEFLTFLIVGGGPTGVEMAGAVAELTRHAADMDFHYITRRCVRIILIEAGQRLLATF 220
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
+RL A L K GV + G V +D+ +++D + ++W+ GV S +
Sbjct: 221 PERLSEAARRALVKLGVEVRLGSRVTSIDAAGAVVDDEL-IRSATIIWAAGVKASPAAQW 279
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
LDL GR+ +D L+V V+A+GD + +TG+ V P +A A++QG Y+
Sbjct: 280 LDLAPDRAGRVIVDASLQVADRAGVYAIGDTAAATSATGQPV-PGIAPAAKQQGVYVAHH 338
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
+ K G RA ++ F YRH GS+ATIGR +A+VDL + +G +
Sbjct: 339 IA--AKLGHRRAPTS--------FRYRHFGSLATIGRKRAVVDL------GWVRFSGLAA 382
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNW 270
W++W +A++ + +RNRF V NW
Sbjct: 383 WILWSTAHIYFLAGFRNRFVVGANW 407
>gi|350568703|ref|ZP_08937101.1| NADH dehydrogenase [Propionibacterium avidum ATCC 25577]
gi|348660946|gb|EGY77642.1| NADH dehydrogenase [Propionibacterium avidum ATCC 25577]
Length = 469
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 138/283 (48%), Gaps = 30/283 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSS 65
+ ++ + ++VGGGPTGVE +G L++ + + V D +HVTL+E A+ +L
Sbjct: 177 DTQRDKTFDVIIVGGGPTGVEMAGTLAEMKSIGIPAIFPDVSTDRVHVTLVEMADHLLMP 236
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
FD LRHY QL K GV + + + +V ++L DG +P +++W+ GVG V
Sbjct: 237 FDPALRHYTRRQLQKRGVDVRTKTAIAEVREDSVLLKDGQTLPADMVIWAAGVGAHKSVS 296
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
+ GGRI D LRV +FAVGD + E P LAQ A + G+ +
Sbjct: 297 DWGFEQGRGGRIATDGTLRVNGHDRIFAVGDGAINTEDPK----PQLAQPAIQGGECV-- 350
Query: 185 LLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
A +ELG+P F Y+ G+MATIGR A+V L S+ L
Sbjct: 351 ------------ARQIVHLELGEPLEKFEYQDKGTMATIGRNSAVVQL-----SEKLKFT 393
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRDISRI 283
G +WL W ++ ++ RNR +N ++ F R+ I
Sbjct: 394 GISAWLTWVMVHIYTLLGGRNRLQAMINLGARYIAFHREAGAI 436
>gi|432334382|ref|ZP_19586067.1| NADH dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
gi|430778704|gb|ELB93942.1| NADH dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
Length = 463
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 147/281 (52%), Gaps = 33/281 (11%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSF 66
+E++RLL VVVG GPTGVE +G++++ R + YS+ +D V L A+ +L F
Sbjct: 161 QERARLLTFVVVGAGPTGVEMAGQIAELAYRTLVGAYSNFDPRDARIVLLDAASAVLPPF 220
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILND--GTE--VPYGLLVWSTGVGPST 121
D L A L K GV + G V DVD+ L + D GTE + VWS GV S
Sbjct: 221 GDNLGSEAAETLEKLGVEVRLGASVTDVDAGGLTVRDADGTEHRIESVCKVWSAGVAASP 280
Query: 122 LVKSL------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
L + L D+ ++ GR+ +DE L +P +VF VGD + LP +AQVA
Sbjct: 281 LGRRLAEQSGADIDRA--GRVAVDEDLTLPGNPNVFVVGDM------MSRDRLPGVAQVA 332
Query: 176 ERQGKYLF-SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 234
+ G+Y + + A GR + PF YR GSMATI R+ A+ ++
Sbjct: 333 IQGGRYAAKQIAAEVTAAAKGRPVPERT-----PFRYRDKGSMATICRFNAVAEI----- 382
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
GL + GFL+W++W + ++ VV +R+R ++WA TF+
Sbjct: 383 -GGLEVTGFLAWIMWLAVHVVYVVGFRSRLATLLSWAWTFL 422
>gi|424856608|ref|ZP_18280816.1| NADH dehydrogenase [Rhodococcus opacus PD630]
gi|356662743|gb|EHI42922.1| NADH dehydrogenase [Rhodococcus opacus PD630]
Length = 463
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 146/281 (51%), Gaps = 33/281 (11%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSF 66
+E++RLL VVVG GPTGVE +G++++ R + YS+ +D V L A+ +L F
Sbjct: 161 QERARLLTFVVVGAGPTGVEMAGQIAELAHRTLVGAYSNFDPRDARIVLLDAASAVLPPF 220
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILND--GTE--VPYGLLVWSTGVGPST 121
D L A L K GV + G V DVD+ L + D GTE + VWS GV S
Sbjct: 221 GDNLGSEAAETLEKLGVEVRLGASVTDVDAGGLTIRDADGTEHRIESVCKVWSAGVAASP 280
Query: 122 LVKSL------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
L + L D+ ++ GR+ +DE L +P +VF VGD + LP +AQVA
Sbjct: 281 LGRRLAEQSGADIDRA--GRVAVDEDLTLPGNPNVFVVGDM------MSRDRLPGVAQVA 332
Query: 176 ERQGKYLF-SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 234
+ G+Y + + A GR + PF YR GSMATI R+ A+ +
Sbjct: 333 IQGGRYAAKQIAAEVTAAAKGRPVPERI-----PFRYRDKGSMATISRFHAVAKI----- 382
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
GL L GFL+W++W + ++ VV +R+R ++WA TF+
Sbjct: 383 -GGLELTGFLAWIMWLAVHVVYVVGFRSRLATLLSWAWTFL 422
>gi|294656521|ref|XP_458790.2| DEHA2D07568p [Debaryomyces hansenii CBS767]
gi|199431532|emb|CAG86934.2| DEHA2D07568p [Debaryomyces hansenii CBS767]
Length = 568
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 41/307 (13%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+E++ RLL VV GGGPTGVE +GEL D+I +D+++ V + V L+EA +L+ F
Sbjct: 270 DEDRKRLLSIVVCGGGPTGVEVAGELQDYIDQDLKKWMPEVASELKVILVEALPNVLNMF 329
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN-----DGT----EVPYGLLVWSTG 116
+ +L Y + + L +VK+V + + + DG+ E+PYG+L+W+TG
Sbjct: 330 NKKLVDYTKQVFQDTNIDLKTNTMVKNVSDKHVTCSVKDPKDGSTEIQEIPYGMLIWATG 389
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
P + +L + + R G +DE L V +++A+GDC+ T A
Sbjct: 390 NAPRAITHNLTSKIDEQRNARRGLLVDERLLVDGTDNIYALGDCTF-------TKYAPTA 442
Query: 173 QVAERQGKYL--------------FSLLNRIGKAGGGRANSAKDMELGDP---FVYRHLG 215
QVA ++G +L F++ N R + L D F Y + G
Sbjct: 443 QVAFQEGTFLAKHFEKVHELEATKFTIQNPTATDNIDRLKKKFSI-LQDKLPVFEYVNQG 501
Query: 216 SMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
++A IG KA+ DL S ++ G L++L WRSAY+ +S +N+ V ++WA +
Sbjct: 502 ALAYIGSEKAVADLVWGDWS-NVTTGGTLTFLFWRSAYVYMCLSVKNQVLVCLDWAKVSI 560
Query: 276 FGRDISR 282
FGRD S+
Sbjct: 561 FGRDCSK 567
>gi|70995614|ref|XP_752562.1| alternative NADH-dehydrogenase [Aspergillus fumigatus Af293]
gi|66850197|gb|EAL90524.1| alternative NADH-dehydrogenase [Aspergillus fumigatus Af293]
gi|159131317|gb|EDP56430.1| alternative NADH-dehydrogenase [Aspergillus fumigatus A1163]
Length = 603
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/340 (32%), Positives = 166/340 (48%), Gaps = 74/340 (21%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
EEE RLLH VVVGGGPTGVEF+GEL DF D+++ +KD HVTL+EA +L F
Sbjct: 272 EEEVKRLLHMVVVGGGPTGVEFAGELQDFFNEDLKKWIPEIKDNFHVTLVEALPNVLPMF 331
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTGV 117
+L Y + + + + + +VK+V + ++ DGT+ +PYGLLVW+TG
Sbjct: 332 SKQLIDYTESTFKEEAITIRTKTMVKNVTDKYIEAEVTKPDGTKELETIPYGLLVWATGN 391
Query: 118 GPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
+V+ L +P R G ++E+L V ++V+AVGDC+ T AQ
Sbjct: 392 AVRNVVRDLMNQIPAQKNSRRGLAVNEYLVVNGTENVWAVGDCAV-------TNYAPTAQ 444
Query: 174 VAERQGKYLFSLLN-------------RIGKAGGGRANSAKDMELGD------------- 207
VA ++G +L L N R+ +A N + ++ D
Sbjct: 445 VASQEGAFLARLFNTMAKTEAIEKELKRLSEAQAVAKNEEERNKIFDEIRERQKQLRRTK 504
Query: 208 ---PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVS----- 259
PF Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ S
Sbjct: 505 QIGPFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTVTYLFWRSAYLSMCFSSKCLL 562
Query: 260 -----------------WRNRFYVAVNWATTFVFGRDISR 282
RNR VA +W +FGRD+SR
Sbjct: 563 RPTNHKIVPFPFLTISIARNRVLVAADWLKAKIFGRDVSR 602
>gi|359688185|ref|ZP_09258186.1| NADH dehydrogenase [Leptospira licerasiae serovar Varillal str.
MMD0835]
gi|418747801|ref|ZP_13304096.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira licerasiae
str. MMD4847]
gi|418758010|ref|ZP_13314194.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira licerasiae
serovar Varillal str. VAR 010]
gi|384114717|gb|EIE00978.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira licerasiae
serovar Varillal str. VAR 010]
gi|404276651|gb|EJZ43962.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira licerasiae
str. MMD4847]
Length = 428
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 149/284 (52%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN- 60
LAG E K L + V++GGGPTGVE +G +++ VR + + + +TLIEA+
Sbjct: 149 LAGDPELAKKHL-NYVIIGGGPTGVELAGSIAELSHEIVRNEFHTIDPALAKITLIEASP 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L++F +L +A +L K GV ++ G V ++D Q + +G +P ++W+ GV
Sbjct: 208 RLLAAFAPKLSEFAKVRLEKRGVEVLTGTKVLEID-QNGVKIEGRTIPSSTVIWAAGVQA 266
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+++ SL +P GR+ +DE+ V +VF +GD + Y + K LP ++ VA +QG
Sbjct: 267 NSIGASLGVPTDRAGRVMVDEFCNVEGHPEVFVIGDIANYSKGMEKP-LPGVSPVAMQQG 325
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+Y+ SL+ G S K PF Y GSMATIGR A+ +
Sbjct: 326 RYVASLIR-------GDLKSKKR----KPFRYLDKGSMATIGRQDAVAQV------GNFR 368
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L GF W+VW ++ V ++N+ + + W +++ R +R+
Sbjct: 369 LRGFFGWVVWLFIHIFYQVGFKNKISIFITWVWSYITFRAEARL 412
>gi|346971407|gb|EGY14859.1| external NADH-ubiquinone oxidoreductase [Verticillium dahliae
VdLs.17]
Length = 544
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 163/321 (50%), Gaps = 62/321 (19%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI--HVTLIEAN 60
L + E++ LLH VVGGGPTG+EF+ EL D +R R V D + H L +++
Sbjct: 246 LPTATPEQRRALLHFAVVGGGPTGIEFAAELHDPHLRGPRPPLPPV-DALGGHHRLRQSS 304
Query: 61 E----ILSSFDDRLR---HYATTQLSKSGVRLVRGIVKDVDSQ----KLILND--GTEVP 107
+ +S R+ A +SK+ L + I +D S KL + + G EV
Sbjct: 305 QGGGHCSTSSSPRMPLTCSSARASISKTEHHLTQ-IRQDDQSPHGALKLSIQEEPGAEVG 363
Query: 108 YGLLVWSTGVGPSTLV-----KSLDLP----KSPG-------GRIG---IDEWLRVP--- 145
LLVWSTG+ P+ LV + L LP SP GR G D+ LR+
Sbjct: 364 ARLLVWSTGLMPNPLVQKMVARELRLPGSGDSSPPETFHLQTGRSGGLLTDDHLRLRLDQ 423
Query: 146 ---SVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKD 202
+++DVFA+GDC+ + LPA AQVA +Q YL LNR G D
Sbjct: 424 GDRTLRDVFAMGDCA----VMDREALPATAQVASQQAVYLARTLNRHGD----------D 469
Query: 203 MELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRN 262
+ PF +R+LG+MA +G ++A+ +S L G L+W++WR AYLT +S RN
Sbjct: 470 VSRAKPFAWRNLGTMAYLGSWRAI------HQSSADGLRGRLAWVLWRGAYLTMSMSVRN 523
Query: 263 RFYVAVNWATTFVFGRDISRI 283
+ V V+W T+VFGRDISR
Sbjct: 524 KIMVPVHWFMTWVFGRDISRF 544
>gi|319778063|ref|YP_004134493.1| fad-dependent pyridine nucleotide-disulfide oxidoreductase
[Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317171782|gb|ADV15319.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 464
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 148/264 (56%), Gaps = 21/264 (7%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSFD 67
E+SRL+ ++GGGPTGVE +G +++ + + + +++ + + L+EA N +L+ F
Sbjct: 167 EQSRLMTIAIIGGGPTGVELAGSIAELSRHTLARDFRNIRPEKTKIILVEAGNRLLAGFA 226
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
L YA +L GV + + V+ +++QK+ + G +P L +W+ GV S L L
Sbjct: 227 PELSEYARLRLESLGVDVALDSRVEAIEAQKITVG-GKVIPVALTLWAAGVAASPLAAQL 285
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
+ GGR+ + L+V D+FA+GD + +L+ G+ LP LAQVA++QG++L
Sbjct: 286 GVGLDRGGRVKVGSDLQVMGRSDIFALGDVALFLDENGQP-LPGLAQVAKQQGEHL---- 340
Query: 187 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
GKA R ++ +D+ FV+R+ G+ A +GR+ A+ ES L L G+ +W
Sbjct: 341 ---GKALARRTDTGEDLPA---FVFRNRGNTAIVGRHAAVF------ESGRLKLKGWFAW 388
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNW 270
W ++ +V +++R V++ W
Sbjct: 389 SAWAIIHVYLLVGFQHRVQVSIQW 412
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 11/115 (9%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELS------DFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
+S + VVVGGG G+E + L I R + + + + A +I
Sbjct: 15 RSMIPRIVVVGGGFAGLEVAKALGGAEIGVTIIDRHNHHLFQPLLYQVATAALSAPDIAE 74
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
L Y + Q+ V + D +++ L+L DGT VPY LLV +TG P
Sbjct: 75 PIRKILGRYPSVQVLFGNVAKI-----DTEARILVLADGTTVPYDLLVLATGSQP 124
>gi|444313072|ref|ZP_21148633.1| NADH dehydrogenase [Ochrobactrum intermedium M86]
gi|443483605|gb|ELT46446.1| NADH dehydrogenase [Ochrobactrum intermedium M86]
Length = 423
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 146/278 (52%), Gaps = 23/278 (8%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH-VTLIEAN-EILSSF 66
E+K+ L+ +VGGGPTGVE +G LSD +R + + + V LIEA +IL +F
Sbjct: 149 EKKAAWLNFAIVGGGPTGVELAGALSDIAKHTLRGEFRSIDPGMATVRLIEAGPKILGAF 208
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
D L A QL + GV +V+ V +++ LN G VP ++W+ GV S L +
Sbjct: 209 PDELSFAAELQLRRLGVEVVKNCRVTEINQHGYSLN-GAFVPCRTVIWAAGVQASPLGRR 267
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
L++P GR+ +++ L VP ++F GD + +E G+ V P +A A++ G Y+ L
Sbjct: 268 LNVPLDRAGRVKVEKNLSVPGHGNIFVAGDLAS-IEVNGRPV-PGVAPAAKQMGAYVAEL 325
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
L +A A E F Y GS+A IGR A+VD+ + L+G+++
Sbjct: 326 L---------KARLAGRQE--PVFDYHDKGSLAIIGRMAAVVDVGK------FRLSGYIA 368
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
WL W + ++ ++ + NRF V +NW + R SRI
Sbjct: 369 WLFWLTIHIFFLIGFGNRFVVMLNWGINYWTHRRFSRI 406
>gi|281420864|ref|ZP_06251863.1| putative NADH dehydrogenase, FAD-containing subunit [Prevotella
copri DSM 18205]
gi|281405156|gb|EFB35836.1| putative NADH dehydrogenase, FAD-containing subunit [Prevotella
copri DSM 18205]
Length = 466
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 151/299 (50%), Gaps = 33/299 (11%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVT 55
L +EEE+ LL+ V+VGGG TGVE +G LS+ +RY DY +H+
Sbjct: 151 LTCATEEERQELLNVVIVGGGATGVEIAGALSEM------KRYVIPYDYPDMDSSLMHIY 204
Query: 56 LIEA-NEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVW 113
L+EA + +L+ A L+ GV + G +V D K+++ DG E+P +W
Sbjct: 205 LLEAGDRLLAGMSQDSSKKAYEFLTSMGVDVQFGKMVTDYKDHKVLMKDGQEIPTRTFLW 264
Query: 114 STGVG--PSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPA 170
+GV P T + L + G RI +DE+ R+P + +FA+GD C + P
Sbjct: 265 VSGVKAQPITGIDGDHLGR--GFRIVVDEFNRIPGMDGLFAIGDQCIQTTDPAYPGGHPQ 322
Query: 171 LAQVAERQGKYLFSLLNRIGKAG------GGRANSAKDMELGDPFVYRHLGSMATIGRYK 224
LAQVA +Q L + +I KA G + D +L PF Y++LGSMATIGR K
Sbjct: 323 LAQVAIQQAALLAKNIQKIAKADEENEKHPGSSAQNIDQQL-KPFRYKNLGSMATIGRNK 381
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
A+V+L + GF +W++W +L ++ +N+ V +NW +V D R+
Sbjct: 382 AVVELGK------FHSQGFFAWVLWLVVHLRSILGVKNKVMVMLNWLWKYVSYNDSIRM 434
>gi|334128805|ref|ZP_08502684.1| pyridine nucleotide-disulfide oxidoreductase [Centipeda periodontii
DSM 2778]
gi|333386217|gb|EGK57435.1| pyridine nucleotide-disulfide oxidoreductase [Centipeda periodontii
DSM 2778]
Length = 446
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 139/279 (49%), Gaps = 14/279 (5%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--IHVTLIEA-NEILSS 65
E + R L+ V+VGGG TG+E +G L + I D+ ++ H D+ +HVTL+EA +L
Sbjct: 172 EARQRHLNFVIVGGGATGIEMAGALMELI--DIFKKEFHTIDFSEVHVTLLEAMGSVLPM 229
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
L+ + L K GV + + V + D L LN+G +P ++W+ GV +K
Sbjct: 230 VPPDLQQHTIDVLRKKGVDVRLNTAVTEYDGNDLTLNNGEVIPTKTVIWAAGVRAQDFIK 289
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
GRI ++E L V VFA+GDC+ + + LP +A VA ++
Sbjct: 290 DCGGEVDRAGRIIVEENLLVKGSDRVFAIGDCANFQHGDMQRPLPTVAPVATQEA---LQ 346
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
+ I G+ +LG FVY+ LG+MATIG+ +A+++ L ++GF
Sbjct: 347 VKENIMALIAGKTPD----QLGK-FVYKDLGAMATIGKGEAVMNGPMPVLGFNLKMSGFF 401
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W W +L R+ F V+V W F FG ++RI
Sbjct: 402 AWFAWMLVHLIRLAGKYADFTVSVKWIWNFFFGTRLARI 440
>gi|320591428|gb|EFX03867.1| alternative NADH-dehydrogenase [Grosmannia clavigera kw1407]
Length = 597
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 163/320 (50%), Gaps = 55/320 (17%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+ EE RLLH VVVGGGPTGVEF+GEL DF D+++ + D VTLIEA +L S
Sbjct: 288 TSEEIDRLLHMVVVGGGPTGVEFAGELHDFFEDDIKKLIPDIADRFRVTLIEALPNVLPS 347
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGTE----VPYGLLVWSTG 116
F +L Y + + + + + +VK V + + DG++ PYGLLVW+TG
Sbjct: 348 FSKQLIDYTESTFKEEEIAIHTKTMVKKVTDKAVEAEASRPDGSKERVVFPYGLLVWATG 407
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPA 170
+V+ L +P R G ++E+L V +D++AVGDC +GY +
Sbjct: 408 NALRPVVRDLMGRIPAQKDSRRGLAVNEYLVVQGARDIWAVGDCAVAGYAPT-------- 459
Query: 171 LAQVAERQGKYLFSLLNRIGKA------------------GGGRANSAKDMELGD----- 207
AQVA ++G +L L N + + G +++++E +
Sbjct: 460 -AQVASQEGAFLARLFNNMARTAVLEDRVRTLSASLNLQPGTDAPTASREIEEAERQLRR 518
Query: 208 -----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRN 262
PF Y H GS+A IG KA+ D+ + + G +++L WRSAYL+ V S RN
Sbjct: 519 IKDIKPFHYSHQGSLAYIGSEKAVADIAWF--NGNFASGGSMTFLFWRSAYLSMVFSSRN 576
Query: 263 RFYVAVNWATTFVFGRDISR 282
R V +W + +FGRDISR
Sbjct: 577 RLLVINDWIKSKLFGRDISR 596
>gi|358370083|dbj|GAA86695.1| pyridine nucleotide-disulphide oxidoreductase [Aspergillus kawachii
IFO 4308]
Length = 566
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 163/355 (45%), Gaps = 91/355 (25%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L S E +S LLH +VG GPTG E + L DFI++D+ Y +K +TL + A +
Sbjct: 227 LPTTSPELRSHLLHFAIVGAGPTGTELAASLRDFIVKDLVALYPALKGIPRITLYDIAPK 286
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-----VRGI---------VKDVDSQK---LILNDGT 104
+LS FD++L YA + K G+ + V+ + ++D ++ L +
Sbjct: 287 VLSMFDEKLSQYAMDTMQKEGIEIKPSHHVQSLRWGEPGAEPPYEMDPKRCLTLTTAEEG 346
Query: 105 EVPYGLLVWSTGVGPSTLVK----SLD-------LPKSPG-------------------- 133
EV G+ VW+TG + V+ ++D L KSP
Sbjct: 347 EVGVGMCVWATGNAMNKFVRDALTTVDKYPSNSALLKSPTSNDTSGTQKTTTNTTWHVKK 406
Query: 134 ----GRIGIDEWLRV--------------PS---VQDVFAVGDCSGYLESTGKTVLPALA 172
G + +D LRV P +QDV+A+GD + + TG PA A
Sbjct: 407 APKVGALLVDGHLRVQLESSSSDDDESNPPQTAILQDVYALGDNA--MPETGAP--PATA 462
Query: 173 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL-RQ 231
Q ++ K+L + LN+ D PF +R++G++A IG KAL+ +
Sbjct: 463 QATFQEAKWLATRLNK------------DDFATAPPFSFRNMGTLAYIGDAKALMQIPHD 510
Query: 232 NKESKGL----SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
NKE G L G ++W+VW SAYLT +SWRN+ V W +FGRD+SR
Sbjct: 511 NKEDGGRYLPEGLTGRMAWVVWNSAYLTMSISWRNKLRVGFRWLLNQIFGRDVSR 565
>gi|50841641|ref|YP_054868.1| NADH dehydrogenase [Propionibacterium acnes KPA171202]
gi|289424391|ref|ZP_06426174.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes SK187]
gi|289427552|ref|ZP_06429265.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes J165]
gi|295129692|ref|YP_003580355.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes SK137]
gi|335055422|ref|ZP_08548203.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium sp.
434-HC2]
gi|354606122|ref|ZP_09024093.1| hypothetical protein HMPREF1003_00660 [Propionibacterium sp.
5_U_42AFAA]
gi|386023098|ref|YP_005941401.1| NADH dehydrogenase-like protein YumB [Propionibacterium acnes 266]
gi|387502516|ref|YP_005943745.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes 6609]
gi|407934533|ref|YP_006850175.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes C1]
gi|417930539|ref|ZP_12573915.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes SK182]
gi|422384122|ref|ZP_16464263.1| NADH dehydrogenase [Propionibacterium acnes HL096PA3]
gi|422386951|ref|ZP_16467068.1| NADH dehydrogenase [Propionibacterium acnes HL096PA2]
gi|422394129|ref|ZP_16474176.1| NADH dehydrogenase [Propionibacterium acnes HL099PA1]
gi|422424138|ref|ZP_16501089.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL043PA1]
gi|422429276|ref|ZP_16506181.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL072PA2]
gi|422436965|ref|ZP_16513812.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL092PA1]
gi|422447824|ref|ZP_16524556.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL036PA3]
gi|422455327|ref|ZP_16531997.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL030PA1]
gi|422460782|ref|ZP_16537416.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL038PA1]
gi|422475832|ref|ZP_16552277.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL056PA1]
gi|422476410|ref|ZP_16552849.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL007PA1]
gi|422479367|ref|ZP_16555777.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL063PA1]
gi|422481878|ref|ZP_16558277.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL036PA1]
gi|422484846|ref|ZP_16561213.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL043PA2]
gi|422487955|ref|ZP_16564286.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL013PA2]
gi|422489399|ref|ZP_16565726.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL020PA1]
gi|422492407|ref|ZP_16568715.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL086PA1]
gi|422497668|ref|ZP_16573941.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL002PA3]
gi|422503885|ref|ZP_16580122.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL027PA2]
gi|422504596|ref|ZP_16580830.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL036PA2]
gi|422509064|ref|ZP_16585222.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL046PA2]
gi|422514639|ref|ZP_16590757.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL110PA2]
gi|422519572|ref|ZP_16595618.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL074PA1]
gi|422520460|ref|ZP_16596502.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL045PA1]
gi|422523425|ref|ZP_16599437.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL053PA2]
gi|422525537|ref|ZP_16601539.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL083PA1]
gi|422527984|ref|ZP_16603971.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL053PA1]
gi|422531631|ref|ZP_16607579.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL110PA1]
gi|422535009|ref|ZP_16610932.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL072PA1]
gi|422536166|ref|ZP_16612074.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL078PA1]
gi|422543979|ref|ZP_16619819.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL082PA1]
gi|422551585|ref|ZP_16627378.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL005PA3]
gi|422554972|ref|ZP_16630742.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL005PA2]
gi|422559385|ref|ZP_16635113.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL005PA1]
gi|422567414|ref|ZP_16643040.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL002PA2]
gi|50839243|gb|AAT81910.1| putative NADH dehydrogenase [Propionibacterium acnes KPA171202]
gi|289155088|gb|EFD03770.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes SK187]
gi|289159482|gb|EFD07673.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes J165]
gi|291375104|gb|ADD98958.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes SK137]
gi|313771303|gb|EFS37269.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL074PA1]
gi|313792734|gb|EFS40815.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL110PA1]
gi|313803398|gb|EFS44580.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL110PA2]
gi|313811668|gb|EFS49382.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL083PA1]
gi|313817809|gb|EFS55523.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL046PA2]
gi|313821366|gb|EFS59080.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL036PA1]
gi|313824694|gb|EFS62408.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL036PA2]
gi|313826358|gb|EFS64072.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL063PA1]
gi|313832135|gb|EFS69849.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL007PA1]
gi|313832936|gb|EFS70650.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL056PA1]
gi|313839796|gb|EFS77510.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL086PA1]
gi|314926400|gb|EFS90231.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL036PA3]
gi|314961500|gb|EFT05601.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL002PA2]
gi|314964108|gb|EFT08208.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL082PA1]
gi|314975372|gb|EFT19467.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL053PA1]
gi|314977423|gb|EFT21518.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL045PA1]
gi|314980086|gb|EFT24180.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL072PA2]
gi|314985236|gb|EFT29328.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL005PA1]
gi|314986940|gb|EFT31032.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL005PA2]
gi|314990566|gb|EFT34657.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL005PA3]
gi|315078786|gb|EFT50808.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL053PA2]
gi|315081739|gb|EFT53715.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL078PA1]
gi|315082945|gb|EFT54921.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL027PA2]
gi|315086463|gb|EFT58439.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL002PA3]
gi|315088179|gb|EFT60155.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL072PA1]
gi|315096990|gb|EFT68966.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL038PA1]
gi|315107555|gb|EFT79531.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL030PA1]
gi|327332670|gb|EGE74405.1| NADH dehydrogenase [Propionibacterium acnes HL096PA2]
gi|327333840|gb|EGE75557.1| NADH dehydrogenase [Propionibacterium acnes HL096PA3]
gi|327444692|gb|EGE91346.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL013PA2]
gi|327446545|gb|EGE93199.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL043PA2]
gi|327449011|gb|EGE95665.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL043PA1]
gi|327457243|gb|EGF03898.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL092PA1]
gi|328757809|gb|EGF71425.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL020PA1]
gi|328759641|gb|EGF73240.1| NADH dehydrogenase [Propionibacterium acnes HL099PA1]
gi|332674554|gb|AEE71370.1| NADH dehydrogenase-like protein YumB [Propionibacterium acnes 266]
gi|333761928|gb|EGL39451.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium sp.
434-HC2]
gi|335276561|gb|AEH28466.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes 6609]
gi|340772157|gb|EGR94670.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes SK182]
gi|353557529|gb|EHC26897.1| hypothetical protein HMPREF1003_00660 [Propionibacterium sp.
5_U_42AFAA]
gi|407903114|gb|AFU39944.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes C1]
gi|456740654|gb|EMF65166.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes FZ1/2/0]
Length = 460
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSS 65
+ ++ + ++VGGGPTGVE +G L++ + + V D +HVTL+E AN +L
Sbjct: 168 DTQRDKTFDVIIVGGGPTGVEMAGTLAEMKSIGIPAIFPDVSTDRVHVTLVEMANHLLMP 227
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
FD LRHY QL K GV + + +V ++L DG +P +++W+ GVG V
Sbjct: 228 FDPALRHYTRRQLQKRGVDVRTNTAIAEVREDSVLLKDGQTLPADMVIWAAGVGAHKSVT 287
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
+ + GGRI D L V +FAVGD + E P LAQ A + G+ +
Sbjct: 288 NWGFEQGRGGRIATDGTLLVKGQDRIFAVGDGAINTEDPK----PQLAQPAIQGGECV-- 341
Query: 185 LLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
A +ELG+P F Y G+MATIGR A+V L S+ L
Sbjct: 342 ------------ARQIVHLELGEPLEKFEYNDKGTMATIGRNSAVVQL-----SEKLKFT 384
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRDISRI 283
G +WL W + ++ ++ RNR +N ++ F R+ I
Sbjct: 385 GIGAWLTWVTVHIFTLLGGRNRLQAMINLGARYIAFHREAGAI 427
>gi|422500098|ref|ZP_16576354.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL063PA2]
gi|313828931|gb|EFS66645.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL063PA2]
Length = 460
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 138/283 (48%), Gaps = 30/283 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSS 65
+ ++ + ++VGGGPTGVE +G L++ + + V D +HVTL+E AN +L
Sbjct: 168 DTQRDKTFDVIIVGGGPTGVEMAGTLAEMKSIGIPAIFPDVSTDRVHVTLVEMANHLLMP 227
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
FD LRHY QL K GV + + +V ++L DG +P +++W+ GVG V
Sbjct: 228 FDPALRHYTRRQLQKRGVDVRTNTAIAEVREDSVLLKDGQTLPADMVIWAAGVGAHKSVT 287
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
+ + GGRI D L V +FAVGD + E P LAQ A + G+ +
Sbjct: 288 NWGFEQGRGGRIATDGTLLVEGQDRIFAVGDGAINTEDPK----PQLAQPAIQGGECV-- 341
Query: 185 LLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
A +ELG+P F Y G+MATIGR A+V L S+ L +
Sbjct: 342 ------------ARQIVHLELGEPLEKFEYNDKGTMATIGRNSAVVQL-----SEKLKIT 384
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRDISRI 283
G +WL W + ++ ++ RNR +N ++ F R+ I
Sbjct: 385 GIGAWLTWVTLHIFTLLGGRNRLQAMINLGARYIAFHREAGAI 427
>gi|422514058|ref|ZP_16590179.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL087PA2]
gi|313807024|gb|EFS45522.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL087PA2]
Length = 460
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSS 65
+ ++ + ++VGGGPTGVE +G L++ + + V D +HVTL+E AN +L
Sbjct: 168 DTQRDKTFDVIIVGGGPTGVEMAGTLAEMKSIGIPAIFPDVSTDRVHVTLVEMANHLLMP 227
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
FD LRHY QL K GV + + +V ++L DG +P +++W+ GVG V
Sbjct: 228 FDPALRHYTRRQLQKRGVDVRTNTAIAEVREDSVLLKDGQTLPADMVIWAAGVGAHKSVT 287
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
+ + GGRI D L V +FAVGD + E P LAQ A + G+ +
Sbjct: 288 NWGFEQGRGGRIATDGTLLVKGQDRIFAVGDGAINTEDPK----PQLAQPAIQGGECV-- 341
Query: 185 LLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
A +ELG+P F Y G+MATIGR A+V L S+ L
Sbjct: 342 ------------ARQIVHLELGEPLEKFEYNDKGTMATIGRNSAVVQL-----SEKLKFT 384
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRDISRI 283
G +WL W + ++ ++ RNR +N ++ F R+ I
Sbjct: 385 GIGAWLTWVTVHIFTLLGGRNRLQAMINLGARYIAFHREAGAI 427
>gi|224013718|ref|XP_002296523.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968875|gb|EED87219.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 415
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 149/291 (51%), Gaps = 39/291 (13%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS 64
I + ++ RLL +VVGGGPT EF EL DFI +DV Y + +I +TL+EA IL
Sbjct: 151 IPDVQRDRLLSFIVVGGGPTSCEFMSELHDFINKDVANWYPDLVKHIKLTLVEAGPGILG 210
Query: 65 SFDDRLRHYATTQLSKSG--VRLVRGIV----KDVDSQKLIL---NDGTEVPYGLLVWST 115
SFD L Y +L++ VRL I + +D +++ + DG+E+ + L+ ++
Sbjct: 211 SFDKALSEYYLKKLNEKNIDVRLNTAISGVDERYIDGEQITVARFADGSEINFVKLISNS 270
Query: 116 GVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPALAQV 174
+ +LD R+ +D++LR+P + FA+GDC+ L LP A V
Sbjct: 271 NL-------TLD-----RDRVIVDDYLRIPETKGRAFALGDCAASLNDK----LPPTATV 314
Query: 175 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDP-FVYRHLGSMATIGRYKALVDLRQNK 233
AE+Q YL N+ ++ P F Y++ G+MA++G + DL
Sbjct: 315 AEQQAIYLSDCFNKY----------YCKFDVSSPKFQYKNRGAMASMGFGGGVTDLTNTD 364
Query: 234 -ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
S +++G S+LVW S YLT+ +S +N + + W +FGRDISR
Sbjct: 365 LPSPKTTMSGQASYLVWTSTYLTKQLSVQNMILIPMYWFKALLFGRDISRF 415
>gi|110635841|ref|YP_676049.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Chelativorans sp. BNC1]
gi|110286825|gb|ABG64884.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Chelativorans sp. BNC1]
Length = 471
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 143/271 (52%), Gaps = 27/271 (9%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDF----IMRDVRQRYSHVKDYIHVTLIEAN- 60
+ +E++R + +VGGGPTGVE +G L++ + RD R S + + LIEA
Sbjct: 169 LDPDEQARQMTIAIVGGGPTGVELAGSLAELSRLTLARDFR---SARPEAARIMLIEAGP 225
Query: 61 EILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
IL +F +++ YA +L + GV + V+D+ + G+ VP GL++W+ GV
Sbjct: 226 RILPAFSEKISAYAHERLERLGVEVHTSTPVEDIQKDSITFG-GSTVPVGLVLWAAGVAA 284
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
S L L GR+ +D +RV +++VFA+GD + + GK LP LAQVA++QG
Sbjct: 285 SPLAAQLGAETDRAGRVIVDGAMRVRGLRNVFAMGDAALFAGQDGKP-LPGLAQVAKQQG 343
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
++L +L R +D + D FVY G+ A +GR+ A+ E
Sbjct: 344 RHLGRMLAR----------HLRDGKPLDEFVYHGRGNTAIVGRHAAVF------EQGRFK 387
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
L G+L+WL W ++ +V +++R V+V W
Sbjct: 388 LTGWLAWLSWAIIHVYLLVGFQHRLTVSVQW 418
>gi|407927792|gb|EKG20678.1| hypothetical protein MPH_02033 [Macrophomina phaseolina MS6]
Length = 585
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 161/320 (50%), Gaps = 58/320 (18%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFD 67
EE RLLH VVVGGGPTGVEF+GEL DF D+++ ++D HVTL+EA +L F
Sbjct: 277 EEIKRLLHMVVVGGGPTGVEFAGELQDFFNGDLKKWIPDIRDNFHVTLVEALPNVLPMFS 336
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGT---------EVPYGLLVWSTGV 117
+L Y + + + + +VK V + K I + T +PYGLLVW+TG
Sbjct: 337 KQLIEYTEKTFKEETITIRTKTMVKKV-TDKYIEAESTGPDGKKQLERIPYGLLVWATGN 395
Query: 118 GPSTLVKSLDLPKSPGGR-----IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+VK L + + P R + ++E+L V ++++AVGDC+ + + T A
Sbjct: 396 AVRPVVKDL-MSQIPAQRDSRRGLAVNEYLVVKGTENIWAVGDCA--VANYAPT-----A 447
Query: 173 QVAERQGKYLFSLLNRIGKAGGGRAN----------------------SAKDM------- 203
QVA ++G +L L N + K + S KD+
Sbjct: 448 QVAAQEGAFLARLFNNMAKTQQIESELLKLSDVQEKAPTKESRDEAFASIKDLQKRLRRV 507
Query: 204 -ELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRN 262
++G PF Y H GS+A IG KA+ D+ + + G L++ WRSAYL+ S RN
Sbjct: 508 KQMG-PFEYSHQGSLAYIGSEKAVADI--TWLTGNFATGGTLTYYFWRSAYLSMCFSTRN 564
Query: 263 RFYVAVNWATTFVFGRDISR 282
R V V+W VFGRD+SR
Sbjct: 565 RVLVLVDWVKAKVFGRDVSR 584
>gi|269925710|ref|YP_003322333.1| NADH dehydrogenase (ubiquinone) [Thermobaculum terrenum ATCC
BAA-798]
gi|269789370|gb|ACZ41511.1| NADH dehydrogenase (ubiquinone) [Thermobaculum terrenum ATCC
BAA-798]
Length = 459
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 146/278 (52%), Gaps = 20/278 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEA-NEILSSF 66
E + RLL V+VG GPTGVE + L D + + Y + + V L+EA + IL +
Sbjct: 185 EVRRRLLTFVIVGAGPTGVELAASLRDLASHVLLKEYPGIDPGEVRVVLVEALDRILLAL 244
Query: 67 DDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
DD+LR A L GV L+ V DV+ + + DG+ +P +VW+ GV + LV
Sbjct: 245 DDQLRQNAMKTLQSKGVEVLLNTPVADVEKGGVRIKDGSFIPSETVVWTAGVKANPLVAD 304
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
L K GR+ +++++++P +++ +GDC+ Y + LP A VA GK +
Sbjct: 305 LPGEKGRDGRVRVNDFMQLPDHPEIYVIGDCAMYFMPGEQRPLPPNAPVAIAGGKT--AA 362
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
+N I ++ K+ L +P Y++ G + ++G+ A+ ++ G+ +GF+
Sbjct: 363 INII--------HTLKNEPL-EPLKYKYQGELVSLGKNNAVANI------MGIKFSGFIG 407
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
WLVWR+ YL ++ ++N+ V V+W R+ S++
Sbjct: 408 WLVWRAVYLYKLEGFKNKASVLVDWLFGVFDRRETSKL 445
>gi|366992588|ref|XP_003676059.1| hypothetical protein NCAS_0D01150 [Naumovozyma castellii CBS 4309]
gi|342301925|emb|CCC69696.1| hypothetical protein NCAS_0D01150 [Naumovozyma castellii CBS 4309]
Length = 549
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 113/311 (36%), Positives = 167/311 (53%), Gaps = 40/311 (12%)
Query: 4 AGISEEE--KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN- 60
+ +SE++ + RLL VVVGGGPTGVEF+ EL D++ +D+ + + I VTL+E
Sbjct: 245 SNLSEDDPKRKRLLSFVVVGGGPTGVEFAAELKDYVDQDLTKWMPKLSKEIRVTLVEGTP 304
Query: 61 EILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL-ILNDGTE---VPYGLLVWST 115
IL SFD +L YA ++ + L +R VK V+ + + LN E +PYG+LVW+T
Sbjct: 305 NILGSFDKKLIKYAEDTFNEEHIDLQLRTRVKSVNCENVQALNPNGELIDIPYGVLVWAT 364
Query: 116 GVGPSTLVKSL--DLPKSPGGR-IGIDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPAL 171
G P + K+L L + R + IDE LR+ ++ ++A+GDC+ Y + P
Sbjct: 365 GNAPREVTKNLMSKLEEQTSRRGLLIDEKLRLLGAENSIYAIGDCTFY-----PGLFPT- 418
Query: 172 AQVAERQGKYL---FSLLNRIG-------KAGGGRANSAKDMELGDP-----------FV 210
AQVA ++ +YL F LN+I K + KD + D F
Sbjct: 419 AQVAHQEAEYLSRVFKKLNKIDQLEWQVQKTKANENITEKDTKTLDKNIDKLPTKIENFK 478
Query: 211 YRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
Y HLG++A IG KA+ DL SK L G ++L ++SAYL +S+RNR V ++W
Sbjct: 479 YNHLGALAYIGAEKAVADLSMFGTSKQY-LTGSFTFLFYKSAYLAMCLSFRNRILVTLDW 537
Query: 271 ATTFVFGRDIS 281
A + FGRD S
Sbjct: 538 AKVYFFGRDSS 548
>gi|383755134|ref|YP_005434037.1| putative NADH dehydrogenase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381367186|dbj|BAL84014.1| putative NADH dehydrogenase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 419
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 138/279 (49%), Gaps = 21/279 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVT--LIEAN-EILSS 65
EE+ ++L V+VGGGPTG+E +G +S+ I ++++ H D+ VT LIEA +L
Sbjct: 152 EERRKMLSFVIVGGGPTGIEEAGAISELI--GIQKKEFHNLDFSEVTVKLIEATPNVLPM 209
Query: 66 FDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
LR + L GV L+ V D + L +G E+P L+W+ GV ++
Sbjct: 210 MPQNLRDHTVEVLRSKGVEVLLNTQVTGYDGHVIKLKNGEEIPTSTLIWAAGVKAVPFIE 269
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
+ GR+ +DE LRV Q+VFA+GDC+ + T + L +A VA ++
Sbjct: 270 NCGGEVDRAGRVIVDEKLRVNGSQNVFAIGDCANFCHGTERP-LATVAPVATQEAVVAHE 328
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
+ R+ + EL FVY+ LG+MATIGR +A+V K S + GF+
Sbjct: 329 NIMRLIRG---------QQEL-KTFVYKDLGAMATIGRGQAVVA----KTSMNPEMTGFI 374
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W W +L R+ VA+ W + G + RI
Sbjct: 375 AWCAWMFIHLIRLAGTHTNITVAIKWTWNLLSGTRLGRI 413
>gi|452986735|gb|EME86491.1| hypothetical protein MYCFIDRAFT_210507 [Pseudocercospora fijiensis
CIRAD86]
Length = 428
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 147/289 (50%), Gaps = 32/289 (11%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE- 61
L +S++E+ LLH V+VGGGPTGVE S E+SD D+ + Y ++ + + + +A
Sbjct: 164 LPDVSKQEQRELLHIVIVGGGPTGVEISAEMSDLFNEDMTKLYPNLAGKMSIAIHDAAPF 223
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVR-GIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120
IL +F+D LR ++ +K V ++ +K V+S + + G+++W+ G
Sbjct: 224 ILGAFEDALRQHSIKSFAKRNVNVITDSKIKKVESDHIETEVEGRIGCGMVIWTAGNKQC 283
Query: 121 TLVKSLDLPKSPG-GRIGIDEWLRVPSVQ-----DVFAVGDCSGYLESTGKTVLPALAQV 174
LV SLD+ K+ RI D++LRV Q DV+A+GD + K LP A+V
Sbjct: 284 PLVDSLDVCKTDKLPRIMTDQYLRVLDAQKQPMKDVYALGDAA----DIKKYFLPTTAEV 339
Query: 175 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 234
A ++ +YL + +NR +E PF YR +A IG + ++ Q K+
Sbjct: 340 AVQKAEYLANAINR-------------GIEGQRPFQYRQKSLVAYIGGHDGVI---QGKD 383
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+G +W WRS L SWR +F + W +V G++I+R+
Sbjct: 384 ----DWSGPRAWAAWRSKNLLWTRSWRRKFMIMAYWYLDWVGGKEIARL 428
>gi|409077243|gb|EKM77610.1| NDE1, mitochondrial external NADH dehydrogenase [Agaricus bisporus
var. burnettii JB137-S8]
Length = 581
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 161/319 (50%), Gaps = 48/319 (15%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
G +E RLLH VVVGGGPTGVE SGEL DF+ D++ Y + + +TL+EA
Sbjct: 262 FPGQDPQEIERLLHMVVVGGGPTGVELSGELHDFLEDDLKSWYPELAGKVRITLVEALPS 321
Query: 62 ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGTEVPYGLLVWSTG 116
+L +F +L Y + +S + L + +VK++ + +IL EVP GL+VW+ G
Sbjct: 322 VLPTFSKQLIDYTQSTFKESKIEVLTKTMVKEIKERSVILQMPDKSIQEVPCGLVVWAGG 381
Query: 117 VGPSTLVKSL--DLPKSPGGRIGI--DEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPAL 171
+ + L P+ R GI D++LR+ +D +FA+GDC+ T
Sbjct: 382 NKGRKVTQDLMAKFPEVQTNRRGIVVDDFLRMTGAEDSIFAIGDCTS-------TAYAPT 434
Query: 172 AQVAERQGKYLFSLLNRIGK-------------------AGGGRANSAKDMELGD----- 207
AQVA +QG YL L+++ K + + +D+E+
Sbjct: 435 AQVASQQGSYLARHLHQMAKHDELQTKLSRLEALAATVVGEEEKKATLRDVEMTKKQLAK 494
Query: 208 ----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG KA+ DL + ++ G +++ WRSAYL+ + S RNR
Sbjct: 495 IKYRPFDYSHQGSLAYIGSEKAVADL--PFMNGNVATGGVATYMFWRSAYLSTLFSLRNR 552
Query: 264 FYVAVNWATTFVFGRDISR 282
VA +W +FGRD++R
Sbjct: 553 TLVATDWIKVKLFGRDVAR 571
>gi|350638653|gb|EHA27009.1| hypothetical protein ASPNIDRAFT_205518 [Aspergillus niger ATCC
1015]
Length = 560
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 159/349 (45%), Gaps = 85/349 (24%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L S E +S LLH +VG GPTG E + L DFI++D+ Y +K ++L + A +
Sbjct: 227 LPTTSPELRSYLLHFAIVGAGPTGTELAASLRDFIVKDLVALYPALKGIPRISLYDIAPK 286
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-----VRGI---------VKDVDSQK---LILNDGT 104
+LS FD++L YA + K G+ + V+ + ++D ++ L +
Sbjct: 287 VLSMFDEKLSQYAMNTMQKEGIEIKPSHHVQSLRWGEPGAEPPYEMDPKRCLTLTTEEEG 346
Query: 105 EVPYGLLVWSTGVGPSTLVKSL----------------------------------DLPK 130
EV G+ VW+TG + V+ + K
Sbjct: 347 EVGVGMCVWATGNAMNKFVRDALTTVDEYPSKSAHLISPSSSTTTDPQPTTTNTTWHVKK 406
Query: 131 SPG-GRIGIDEWLRV---------PS---VQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
+P G + +D LRV P +QDV+A+GD + + TG PA AQ +
Sbjct: 407 APKVGALLVDGHLRVQLESSDESNPQTAILQDVYALGDNA--MPETGAP--PATAQATFQ 462
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
+ K+L + LN+ D PF +R++G++A IG KAL+ + +K G
Sbjct: 463 EAKWLATRLNK------------DDFATAPPFSFRNMGTLAYIGDAKALMQIPHDKGDGG 510
Query: 238 L----SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
L G ++WLVW SAYLT +SWRN+ V W +FGRD+SR
Sbjct: 511 RYLPEGLTGRMAWLVWNSAYLTMSISWRNKLRVGFRWFLNQIFGRDVSR 559
>gi|440635335|gb|ELR05254.1| NADH dehydrogenase [Geomyces destructans 20631-21]
Length = 573
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 155/319 (48%), Gaps = 54/319 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
S EE RLLH VVVGGGPTGVEF+GEL DF +D+R+ + D VTLIEA +L S
Sbjct: 265 SPEEIKRLLHMVVVGGGPTGVEFAGELQDFFDQDIRKWVPEISDKFKVTLIEALPNVLPS 324
Query: 66 FDDRLRHYATTQLSKSGVRL-----VRGIVKDVDSQKLILNDG----TEVPYGLLVWSTG 116
F +L Y + + + + V+ + + + DG T +PYGLLVW+TG
Sbjct: 325 FSKQLIDYTESTFKEEKITIMTKTAVKKVTANTVEAEATSPDGKKTTTILPYGLLVWATG 384
Query: 117 VGPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDC--SGYLESTGKTVLPA 170
+V L +P R + ++E+L V D++A GDC +GY +
Sbjct: 385 NAVRPIVHDLMSQIPAQKDSRRGLAVNEYLVVQGTTDIWATGDCAVAGYAPT-------- 436
Query: 171 LAQVAERQGKYLFSLLNRIGKA--------------------GGGRANSAKDMELG---- 206
AQVA ++G +L L N + K A +D++
Sbjct: 437 -AQVAAQEGAFLARLFNTMAKTEFLESRIDELSTSLNVTRTDAPVVATELEDLQKSLRRI 495
Query: 207 ---DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
PF Y H GS+A IG +A+ D+ + + G L++L WRSAYL+ S RNR
Sbjct: 496 KDIKPFHYSHQGSLAYIGSDRAVADVTWF--NGNFASGGSLTYLFWRSAYLSMCFSTRNR 553
Query: 264 FYVAVNWATTFVFGRDISR 282
V V+W + FGRD+SR
Sbjct: 554 VLVVVDWLKSKAFGRDVSR 572
>gi|428165566|gb|EKX34558.1| hypothetical protein GUITHDRAFT_98053 [Guillardia theta CCMP2712]
Length = 546
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 160/332 (48%), Gaps = 57/332 (17%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L +++EE+ LL VVVGGGPTGVEFSGE DF+ D+++ Y + ++ LI+A +
Sbjct: 217 LPNLTDEERRELLSFVVVGGGPTGVEFSGEFFDFLNEDLKRYYPQLVPFVRTELIQAGDA 276
Query: 62 ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN--------DGTEVPYGLLV 112
+L+ FD+ ++ A L GV+ L+ V++V ++++ N Y L V
Sbjct: 277 LLNQFDETMQAMALRSLLSQGVKVLLNARVEEVSAKEIRYNIRNPDKTTTTITTKYSLCV 336
Query: 113 WSTGVGPSTLVKSLDLPKSP-----GGRIGIDEWLRVPSVQD--VFAVGDCSGYLESTGK 165
W+ G P L K P GRI D+WLRV + D VFA+GDCS +
Sbjct: 337 WAAGNSPIELSKEFQKKNQPWKQDKRGRIVTDDWLRVVGINDGSVFALGDCS----ESES 392
Query: 166 TVLPALAQVAERQGKYLFSLLNR----------------IGKAGGGRANSAKDMELGD-- 207
VLP AQVA +QG YL + NR A RA + EL
Sbjct: 393 VVLPQTAQVAAQQGAYLARIFNRQFRGPDKGFLPEQTYGAALALSLRARARDGDELAKTI 452
Query: 208 ---------PFVYRHLGSMATIGRYKALVDLRQNKESK---GLSL------AGFLSWLVW 249
PF + LG +A +G A+ + +S G L +G W++W
Sbjct: 453 IDEHRVFVRPFQFLSLGLLAYVGGRSAIAQVEVGMDSPHKTGTQLLRLSKQSGLAGWILW 512
Query: 250 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
RS YLT+ V++RNR V +W + VFGRDI+
Sbjct: 513 RSVYLTKQVAFRNRVLVLFDWMKSRVFGRDIA 544
>gi|367472824|ref|ZP_09472399.1| putative NADH dehydrogenase protein [Bradyrhizobium sp. ORS 285]
gi|365274903|emb|CCD84867.1| putative NADH dehydrogenase protein [Bradyrhizobium sp. ORS 285]
Length = 416
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 137/268 (51%), Gaps = 24/268 (8%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSS 65
E + +L+ V+VGGGPTGVE +G ++D + + ++ V LIEA + +LS+
Sbjct: 153 EALRQKLMTFVIVGGGPTGVEMAGSIADIARNVLAGDFRNIDPQSATVVLIEAGQRLLSN 212
Query: 66 FDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
F + L Y L + V ++ G V D S + L++G + L+W+ GV +
Sbjct: 213 FAEELSDYTRKALQQMNVDVITGAAVTDCTSDSVTLSNGRHIACCCLLWAAGVRATPAAS 272
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
+ GRI +D+ LRV ++FAVGD + S+G +P LA A++ G+Y+
Sbjct: 273 WIGAKSDRAGRIMVDDHLRVSPHTNIFAVGDIAA--ASSGGKPVPGLAPAAKQMGRYVGE 330
Query: 185 LL--NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
L+ + IG+ GRA PFVY H G +ATIGR A+V L K L L G
Sbjct: 331 LIAGDVIGR---GRAPR--------PFVYHHQGDLATIGRKSAVVSL------KHLKLTG 373
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
L W W ++ ++ RNR VA+NW
Sbjct: 374 VLGWAFWGVVHIYFLIGLRNRITVALNW 401
>gi|335052545|ref|ZP_08545426.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium sp.
409-HC1]
gi|342213089|ref|ZP_08705814.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium sp.
CC003-HC2]
gi|365961880|ref|YP_004943446.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes TypeIA2 P.acn31]
gi|365964124|ref|YP_004945689.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes TypeIA2 P.acn17]
gi|365973068|ref|YP_004954627.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes TypeIA2 P.acn33]
gi|419420384|ref|ZP_13960613.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes PRP-38]
gi|422394825|ref|ZP_16474866.1| NADH dehydrogenase [Propionibacterium acnes HL097PA1]
gi|422426901|ref|ZP_16503819.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL087PA1]
gi|422432190|ref|ZP_16509060.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL059PA2]
gi|422434785|ref|ZP_16511643.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL083PA2]
gi|422442510|ref|ZP_16519313.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL002PA1]
gi|422446299|ref|ZP_16523044.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL027PA1]
gi|422450363|ref|ZP_16527080.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL030PA2]
gi|422452943|ref|ZP_16529639.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL087PA3]
gi|422494494|ref|ZP_16570789.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL025PA1]
gi|422511231|ref|ZP_16587374.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL059PA1]
gi|422538647|ref|ZP_16614521.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL013PA1]
gi|422541435|ref|ZP_16617293.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL037PA1]
gi|422546210|ref|ZP_16622037.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL050PA3]
gi|422556979|ref|ZP_16632726.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL025PA2]
gi|422562202|ref|ZP_16637880.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL046PA1]
gi|422570813|ref|ZP_16646408.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL067PA1]
gi|422577951|ref|ZP_16653480.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL005PA4]
gi|313764848|gb|EFS36212.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL013PA1]
gi|313814057|gb|EFS51771.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL025PA1]
gi|313815591|gb|EFS53305.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL059PA1]
gi|314916388|gb|EFS80219.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL005PA4]
gi|314921603|gb|EFS85434.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL050PA3]
gi|314930748|gb|EFS94579.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL067PA1]
gi|314955132|gb|EFS99537.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL027PA1]
gi|314959328|gb|EFT03430.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL002PA1]
gi|314969219|gb|EFT13317.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL037PA1]
gi|315099599|gb|EFT71575.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL059PA2]
gi|315102169|gb|EFT74145.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL046PA1]
gi|315109959|gb|EFT81935.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL030PA2]
gi|327334723|gb|EGE76434.1| NADH dehydrogenase [Propionibacterium acnes HL097PA1]
gi|327454421|gb|EGF01076.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL087PA3]
gi|327456487|gb|EGF03142.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL083PA2]
gi|328756180|gb|EGF69796.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL087PA1]
gi|328758561|gb|EGF72177.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL025PA2]
gi|333763380|gb|EGL40834.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium sp.
409-HC1]
gi|340768633|gb|EGR91158.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium sp.
CC003-HC2]
gi|365738561|gb|AEW82763.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes TypeIA2 P.acn31]
gi|365740805|gb|AEW80499.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes TypeIA2 P.acn17]
gi|365743067|gb|AEW78264.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes TypeIA2 P.acn33]
gi|379978758|gb|EIA12082.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes PRP-38]
Length = 460
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSS 65
+ ++ + ++VGGGPTGVE +G L++ + + V D +HVTL+E AN +L
Sbjct: 168 DTQRDKTFDVIIVGGGPTGVEMAGTLAEMKSIGIPAIFPDVSTDRVHVTLVEMANHLLMP 227
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
FD LRHY QL K GV + + +V ++L DG +P +++W+ GVG V
Sbjct: 228 FDPALRHYTRRQLQKRGVDVRTNTAIAEVREDSVLLKDGQTLPADMVIWAAGVGAHKSVT 287
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
+ + GGRI D L V +FAVGD + E P LAQ A + G+ +
Sbjct: 288 NWGFEQGRGGRIATDGTLLVEGQDRIFAVGDGAINTEDPK----PQLAQPAIQGGECV-- 341
Query: 185 LLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
A +ELG+P F Y G+MATIGR A+V L S+ L
Sbjct: 342 ------------ARQIVHLELGEPLEKFEYNDKGTMATIGRNSAVVQL-----SEKLKFT 384
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRDISRI 283
G +WL W + ++ ++ RNR +N ++ F R+ I
Sbjct: 385 GIGAWLTWVTLHIFTLLGGRNRLQAMINLGARYIAFHREAGAI 427
>gi|120602932|ref|YP_967332.1| NADH dehydrogenase [Desulfovibrio vulgaris DP4]
gi|120563161|gb|ABM28905.1| NADH dehydrogenase [Desulfovibrio vulgaris DP4]
Length = 439
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 137/274 (50%), Gaps = 25/274 (9%)
Query: 7 SEEEKSR-LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEANE-IL 63
S+ E+ R +L VVGGGPTGVE++G L++ + +R+ + + + + V L+EA +L
Sbjct: 148 SDPERRRAMLTFTVVGGGPTGVEYAGALAELVRAPLRKDFPELDMNDVRVVLLEAAPGVL 207
Query: 64 SSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
F +RLR YA +L GV + + V +V + ++ G +P +VW+ GV +
Sbjct: 208 GGFPERLRGYAKKRLGAMGVEVRLDASVAEVTAAGVLFASGEHLPTHTVVWTAGVRGEVV 267
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
+ + LP GGR+ + L+V + +VF VGD S P Q + +
Sbjct: 268 AEHMGLPLGRGGRVAVSPTLQVEGLPEVFVVGDMSLPEGQNPPMNAPNATQQGRLAAENI 327
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
++L R PF YR G+MATIGR A+V + + +G
Sbjct: 328 LAMLQRRDPV---------------PFRYRDKGAMATIGRQAAVVRM------GNFAFSG 366
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 276
FL+WL+W +L ++ +RNR V +NWA ++F
Sbjct: 367 FLAWLLWLFVHLAYLIGFRNRLIVLINWAWDYLF 400
>gi|429860610|gb|ELA35340.1| pyridine nucleotide-disulfide [Colletotrichum gloeosporioides Nara
gc5]
Length = 424
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 145/289 (50%), Gaps = 33/289 (11%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L +E+E+ LL +VGGG G+E + EL D ++R + + + +T+ + A
Sbjct: 159 LPTATEQEQRDLLSIRIVGGGAIGIEAAAELWDLWFEEMRFLFPQLDGKLTITIHDVAPS 218
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120
ILS+FD RL YAT L V L + V+ +I + +P GL++W+TG S
Sbjct: 219 ILSTFDARLSEYATQSLEGKQVALKTCSHISSVEPDGIITKEDGRLPSGLIIWATGNKAS 278
Query: 121 TLVKSLDLPKSPGG--RIGIDEWLRV-----PSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
+LV+ L++ K G RI D++LRV ++DV+A+GD + LP LA+
Sbjct: 279 SLVQKLNVKKPEHGLPRILTDKYLRVLRPDGSPMKDVYALGDAA----DIDGVSLPTLAE 334
Query: 174 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 233
VA ++G+YL + LN GR K PF Y+ +A +GR+ ++ RQ
Sbjct: 335 VALQKGEYLTTTLN-------GREEDVK------PFGYKQRVLLAYLGRHDGIIGGRQE- 380
Query: 234 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
G +WL WRS L SWR + + ++W ++ GRDI R
Sbjct: 381 ------WTGMSAWLAWRSGSLGWTRSWRRKIMIMISWIFVWLGGRDIVR 423
>gi|386874786|ref|ZP_10117012.1| pyridine nucleotide-disulfide oxidoreductase [Candidatus
Nitrosopumilus salaria BD31]
gi|386807409|gb|EIJ66802.1| pyridine nucleotide-disulfide oxidoreductase [Candidatus
Nitrosopumilus salaria BD31]
Length = 451
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 144/289 (49%), Gaps = 35/289 (12%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSSFDD 68
+ L+ VVVGGG G+E +GEL D ++ D R+ Y + K + V ++EA IL F+
Sbjct: 161 RKSFLNFVVVGGGFAGIETAGELMDLLL-DARKHYPTIQKKDLRVIVLEALGMILPGFNQ 219
Query: 69 RLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYG-------------LLVWS 114
+L +A ++ + G+ + ++ V D ++ P L+W+
Sbjct: 220 KLADFAKDKMVERGIDIRLKTAVTSFDGNEVTTKTIDPTPKDPIDDSFVDSIRTKTLIWT 279
Query: 115 TGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
GV P +K + K+ G++ I+++L VP VFA+GDC+ +L+ + P AQ+
Sbjct: 280 AGVTPVNTIKR-SMFKTDKGKLIINDFLEVPDFPGVFAIGDCALFLDPETQRPFPPTAQI 338
Query: 175 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 234
AE Q K L + K NS K+ FVY G MA IG+ +
Sbjct: 339 AEAQAKVAAKNLTALIK------NSEKE-----KFVYHSKGQMAIIGKRSGIATFL---- 383
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G++++GF +WL+WR+ YL+++ ++ R V ++W F RDISR+
Sbjct: 384 --GMNISGFWAWLIWRNVYLSKIATFDKRTRVFLDWTIDLFFDRDISRL 430
>gi|395206353|ref|ZP_10396919.1| putative NADH dehydrogenase [Propionibacterium humerusii P08]
gi|422441873|ref|ZP_16518682.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL037PA3]
gi|422473198|ref|ZP_16549679.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL037PA2]
gi|422573484|ref|ZP_16649046.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL044PA1]
gi|313835296|gb|EFS73010.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL037PA2]
gi|314928246|gb|EFS92077.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL044PA1]
gi|314970077|gb|EFT14175.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL037PA3]
gi|328905945|gb|EGG25721.1| putative NADH dehydrogenase [Propionibacterium humerusii P08]
Length = 460
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSS 65
+ ++ + + ++VGGGPTGVE +G L++ + + +V D +HVTL+E A+ +L
Sbjct: 168 DTQRDKTVDVIIVGGGPTGVEMAGTLAEMKSIGIPAIFPNVSTDRVHVTLVEMADHLLMP 227
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
FD LRHY QL K GV + + + +V ++L DG +P +++W+ GVG V
Sbjct: 228 FDPALRHYTRRQLQKRGVDVRTKTAIAEVRDDSVLLKDGQTLPADMVIWAAGVGAHESVA 287
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
+ + GGRI + L V VFAVGD G + + T P LAQ A + G+ +
Sbjct: 288 NWGFEQGHGGRIATNGTLLVNGQDRVFAVGD--GAINTEDPT--PQLAQPAIQGGECV-- 341
Query: 185 LLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
A +ELG+P F Y G+MATIGR A+V L S+ L
Sbjct: 342 ------------ARQIIHLELGEPLEKFEYNDKGTMATIGRNSAVVQL-----SEKLKFT 384
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRDISRI 283
G +WL W + ++ ++ RNR +N ++ F R+ I
Sbjct: 385 GIGAWLTWVTVHIYTLLGGRNRLQAMINLGARYIAFHREAGAI 427
>gi|392396417|ref|YP_006433018.1| NADH dehydrogenase, FAD-containing subunit [Flexibacter litoralis
DSM 6794]
gi|390527495|gb|AFM03225.1| NADH dehydrogenase, FAD-containing subunit [Flexibacter litoralis
DSM 6794]
Length = 451
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 149/278 (53%), Gaps = 28/278 (10%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--IHVTLIEAN-EILSS 65
EE+ L++ V+VGGGPTGVE +G L + + + + Y + D+ + + L+EA+ +L+
Sbjct: 173 EEQHALMNVVIVGGGPTGVEVAGALGELKLHVLPKDYPEL-DFRRMEIHLVEASPRLLNG 231
Query: 66 FDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
D A L + V++ +G+ VK D + L++G + LVW+ GV L+K
Sbjct: 232 MTDNSSRKAEDYLKEFTVQIWKGVSVKSFDGNHVELSNGKNLASTTLVWAAGV-TGNLIK 290
Query: 125 SLDLPKS---PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 181
L P+ G RI +DE+ RV + ++FA+GD + + P LA VA +QGK
Sbjct: 291 GL--PEEVVLQGNRIIVDEFNRVKGIDNIFALGDIAAMVSEDFPRGFPMLAPVAMQQGKT 348
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
L L R+ + K+M+ PF Y + GSMAT+GR +A+VDL NK +S
Sbjct: 349 LGDNLKRML--------NKKEMK---PFKYFNKGSMATVGRNRAVVDL-PNK----MSFQ 392
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWA-TTFVFGR 278
GF +W VW +L ++ ++NRF + +W F + R
Sbjct: 393 GFFAWFVWLFVHLMFIIGFKNRFIILTSWVWNYFTYDR 430
>gi|393222443|gb|EJD07927.1| FAD/NAD-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 575
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/315 (36%), Positives = 162/315 (51%), Gaps = 46/315 (14%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
G S EE +RLLH VVVGGGPTGVE SGEL DF+ D+R Y + + +TL+EA
Sbjct: 271 FPGQSPEEIARLLHVVVVGGGPTGVELSGELHDFLEDDLRAWYPELAGNVRITLVEALPS 330
Query: 62 ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN--DGT--EVPYGLLVWSTG 116
+L F +L Y + + + L + +VK V Q ++L D T E+PYG+LVW+ G
Sbjct: 331 VLPMFSKQLIDYTESTFKDAKIDILTKTMVKGVKEQTVLLQMPDKTLQEMPYGMLVWAGG 390
Query: 117 VGPSTLVKSLDL----PKSPGGRIG--IDEWLRVP-SVQDVFAVGDCSGYLESTGKTVLP 169
+ SLDL P++ + G ID++L + S D+FA+GDC+ +
Sbjct: 391 NKARKV--SLDLMAKFPEAQTNKRGLSIDDYLVMKGSKGDIFAIGDCTA-------SAYA 441
Query: 170 ALAQVAERQGKYLFSLLNRIGKAG---------GGRANSA----------KDMELGD--- 207
AQVA +QG YL ++ K RA + K +E
Sbjct: 442 PTAQVASQQGAYLARAFKQMAKRDTLEAQLSEVKARAQAEEGAEEVTRMEKQLEKAKKIR 501
Query: 208 PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVA 267
PF Y H GS+A IG KA+ DL + + ++ G ++L WRS YL+ + S RNR VA
Sbjct: 502 PFHYSHQGSLAYIGSEKAIADL--SFFNGNIASGGVATYLFWRSVYLSTLFSLRNRALVA 559
Query: 268 VNWATTFVFGRDISR 282
+W +FGRD+SR
Sbjct: 560 NDWLKVTLFGRDVSR 574
>gi|422550630|ref|ZP_16626427.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL050PA1]
gi|314917226|gb|EFS81057.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL050PA1]
Length = 460
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSS 65
+ ++ + ++VGGGPTGVE +G L++ + + V D +HVTL+E AN +L
Sbjct: 168 DTQRDKTFDVIIVGGGPTGVEMAGTLAEMKSIGIPAIFPDVSTDRVHVTLVEMANHLLMP 227
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
FD LRHY QL K GV + + +V ++L DG +P +++W+ GVG V
Sbjct: 228 FDPALRHYTRRQLQKRGVDVRTNTAIAEVREDSVLLKDGQTLPADMVIWAAGVGAHKSVT 287
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
+ + GGRI D L V +FAVGD + E P LAQ A + G+ +
Sbjct: 288 NWGFEQGRGGRIATDGTLLVEGQDRIFAVGDGAINTEDPK----PQLAQPAIQGGECV-- 341
Query: 185 LLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
A +ELG+P F Y G+MATIGR A+V L S+ L
Sbjct: 342 ------------ARQIVHLELGEPLEKFEYNDKGTMATIGRNSAVVQL-----SEKLKFT 384
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRDISRI 283
G +WL W + ++ ++ RNR +N ++ F R+ I
Sbjct: 385 GIGAWLTWVTLHIFPLLGGRNRLQAMINLGARYIAFHREAGAI 427
>gi|134055777|emb|CAK37301.1| unnamed protein product [Aspergillus niger]
Length = 560
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 162/349 (46%), Gaps = 85/349 (24%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L S E +S LLH +VG GPTG E + L DFI++D+ Y +K ++L + A +
Sbjct: 227 LPTTSPELRSYLLHFAIVGAGPTGTELAASLRDFIVKDLVALYPALKGIPRISLYDIAPK 286
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-----VRGI---------VKDVDSQK---LILNDGT 104
+LS FD++L YA + K G+ + V+ + ++D ++ L +
Sbjct: 287 VLSMFDEKLSQYAMDTMQKEGIEIKPSHHVQSLRWGEPGAEPPYEMDPKRCLTLTTEEEG 346
Query: 105 EVPYGLLVWSTGVGPSTLVK----SLD------------------------------LPK 130
EV G+ VW+TG + V+ ++D + K
Sbjct: 347 EVGVGMCVWATGNAMNKFVRDALTTVDEYPSKSAHLISPSSSTTTDPQPTTTNTTWHVKK 406
Query: 131 SPG-GRIGIDEWLRV---------PS---VQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
+P G + +D LRV P +QDV+A+GD + + TG PA AQ +
Sbjct: 407 APKVGALLVDGHLRVQLESSDESNPQTAILQDVYALGDNA--MPETGAP--PATAQATFQ 462
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
+ K+L + LN+ D PF +R++G++A IG KAL+ + +K G
Sbjct: 463 EAKWLATRLNK------------DDFATAPPFSFRNMGTLAYIGDAKALMQIPHDKGDGG 510
Query: 238 L----SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
L G ++WLVW SAYLT +SWRN+ V W +FGRD+SR
Sbjct: 511 RYLPEGLTGRMAWLVWNSAYLTMSISWRNKLRVGFRWFLNQIFGRDVSR 559
>gi|330793729|ref|XP_003284935.1| hypothetical protein DICPUDRAFT_148767 [Dictyostelium purpureum]
gi|325085151|gb|EGC38564.1| hypothetical protein DICPUDRAFT_148767 [Dictyostelium purpureum]
Length = 581
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/316 (33%), Positives = 165/316 (52%), Gaps = 49/316 (15%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
E+E RLL+ VVVGGGP+GVEF+ EL+DF+ D+ + Y K I VTL+EA IL+ F
Sbjct: 273 EKEIDRLLNFVVVGGGPSGVEFTAELNDFLQSDLLKNYPLAK-RIKVTLVEALPHILTVF 331
Query: 67 DDRLRHYATTQL-SKSGVRL-VRGIVKDVDSQKLIL----NDGTEVPYGLLVWSTGVGPS 120
D ++ + +L S R+ + V V + +I+ + T VPYGLLVW+TG P
Sbjct: 332 DKKIIDHVEKRLRSSENTRIWTKTAVVGVKEKDIIVRNEKKEETNVPYGLLVWATGNAPR 391
Query: 121 TLVKSL------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
L L ++ + G + ID++ RV ++A+GD S L AQV
Sbjct: 392 KLTTQLIQAIGTNVQNNRRGLV-IDDYFRVAGADGIWAIGDAS----INPSKPLAQTAQV 446
Query: 175 AERQGKYLFSLLNRIGKAGGGRANSAKDMELG---------------------DPFV--- 210
A +QG+YL L N + + +KD +L D F+
Sbjct: 447 ASQQGRYLGRLFNDLAEEMYNEKIKSKDQKLEQVTQEQQPTSTVFQTTTNKSFDSFIKSQ 506
Query: 211 ----YRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYV 266
YRH+G++A +G ++A+ + + + + + G++++ +WRS Y T+++S RNR V
Sbjct: 507 PVFKYRHMGTLAYVGDHQAVAEFKGDHST--TTSEGYITYYLWRSVYFTKLLSIRNRTLV 564
Query: 267 AVNWATTFVFGRDISR 282
+WA + +FGRDISR
Sbjct: 565 VFDWAKSAIFGRDISR 580
>gi|156035569|ref|XP_001585896.1| hypothetical protein SS1G_12988 [Sclerotinia sclerotiorum 1980]
gi|154698393|gb|EDN98131.1| hypothetical protein SS1G_12988 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 598
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/365 (31%), Positives = 160/365 (43%), Gaps = 102/365 (27%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSS 65
SE K +LL+ +VGGGPTGVEF+ EL D D+ Y + YI +T+ + A +IL
Sbjct: 248 SESLKKQLLNFAIVGGGPTGVEFAAELFDLCHEDLSTLYPSLTSYIKITIYDVAPKILPM 307
Query: 66 FDDRLRHYATTQLSKSGVR---------LVRGIVKDV---------DSQK---LILNDGT 104
FD L +YA S+ G+ L +G KD D K L L +
Sbjct: 308 FDKNLANYALEHFSRDGIDIKTEHHILGLKKGFPKDSLEGENGHEEDIGKGFTLNLKEEG 367
Query: 105 EVPYGLLVWSTGV-----------------------------GPSTLVKSLD-----LPK 130
+V G+ VWSTG+ G S +SL+ L +
Sbjct: 368 DVGVGMCVWSTGLMMNPFIEKALSSVHTFPSKSAILATSGEKGISQKSESLENRKWELKR 427
Query: 131 SPG-GRIGIDEWLRV------------------------------PSVQDVFAVGDCSGY 159
SP G + +D + RV + DVFA+GD +
Sbjct: 428 SPKTGGLMVDNFFRVKLATRSSASTSSSSTKSPSQSSIKEQTQQEAIMDDVFALGDVA-- 485
Query: 160 LESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDP-FVYRHLGSMA 218
G LPA AQVA ++ K+L LNRI G SA E GD F ++++G M
Sbjct: 486 --VLGDMALPATAQVANQEAKWLGKRLNRIY----GVEKSAVG-ESGDKGFTFKNMGVMT 538
Query: 219 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
+G KA++ E KG + +WL+WR AYLT+ +SWRN+ + + W + FGR
Sbjct: 539 YVGGMKAIMQTDAKGEIKGRT-----AWLIWRGAYLTQTISWRNKLLIPMYWVINWFFGR 593
Query: 279 DISRI 283
DISR
Sbjct: 594 DISRF 598
>gi|320583458|gb|EFW97671.1| Mitochondrial external NADH dehydrogenase, a type II
NAD(P)H:quinone oxidoreductase [Ogataea parapolymorpha
DL-1]
Length = 556
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 153/304 (50%), Gaps = 38/304 (12%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFD 67
EE+ RLL VV GGGPTGVE + E+ D+I +D+ + + + V L+EA +L+ F
Sbjct: 260 EERKRLLTFVVCGGGPTGVELAAEVKDYIDQDLLKFIPGIDKEMKVVLVEALPNVLNMFH 319
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGTE----VPYGLLVWSTGVG 118
+L Y V L +VK VD++ + + DGT +PYG LVW+ G
Sbjct: 320 PKLIEYTKEVFKTQHVDLRTNTMVKKVDARNVYASAKKPDGTTEEVVIPYGTLVWAGGNA 379
Query: 119 PSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
L +SL + + R G ++E++++ ++A+GDC+ T AQV
Sbjct: 380 QRELTRSLADKITEQKTARRGLLVNEYMKLDGDDHIYALGDCTF-------TANAPTAQV 432
Query: 175 AERQGKYLFSLLNRIGKAGG-------GRANSAKDMELG---------DPFVYRHLGSMA 218
A +QG++L N++ K + ++K+ L PF YRH G++A
Sbjct: 433 AHQQGEFLADHFNKLAKIDDLEYLTSLEKDEASKEKHLKRLERYKNSIKPFSYRHQGALA 492
Query: 219 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
+G +A+ DL S ++L G L++ WR+AY++ ++ R++ V +W +FGR
Sbjct: 493 YVGSERAVADLTWGSWST-VALGGNLTFFFWRTAYVSMILGVRSKLLVISDWIKVSMFGR 551
Query: 279 DISR 282
D S+
Sbjct: 552 DCSK 555
>gi|389742766|gb|EIM83952.1| FAD/NAD-P-binding domain-containing protein [Stereum hirsutum
FP-91666 SS1]
Length = 559
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 164/312 (52%), Gaps = 43/312 (13%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
G S+EE RLLH VVVGGGPTGVE SGEL DF+ +D++ Y + I +TL+EA
Sbjct: 258 FPGQSDEEIDRLLHFVVVGGGPTGVEVSGELHDFLEQDLKSWYPELSSRIRITLVEALPS 317
Query: 62 ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN--DGT--EVPYGLLVWSTG 116
+L F RL Y + +S + L + +VK++ + ++L D T EVP G++VW+ G
Sbjct: 318 VLPMFSKRLIDYTESTFKESKIDILTKTMVKEIKEKSVVLQMPDKTIQEVPVGMVVWAGG 377
Query: 117 VGP----STLVKSLD--LPKSPGGR--IGIDEWLRVPSVQ-DVFAVGDCSGYLESTGKTV 167
P + L+K ++ + +S R I ID+ LR+ VFA+GDC T +
Sbjct: 378 NKPRVVTNDLIKRINSVVAESQTNRRGIAIDDHLRMVGTDGTVFALGDC------TASSY 431
Query: 168 LPALAQVAERQGKYLFSLLNRIG---------------KAGGGRANSAKDMELGDPFVYR 212
P AQVA +QG YL L +++ K G + E PF Y
Sbjct: 432 APT-AQVASQQGAYLGRLFSQLAKRDALAAAAASAVDEKEVEGLKKQLERTEKLRPFHYS 490
Query: 213 HLGSMATIGRYKALVDLR--QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
H GS+A IG KA+ DL K + G G ++L WRSAYL+ + S RNR VA +W
Sbjct: 491 HQGSLAYIGNEKAIADLVFFNQKWASG----GVATFLFWRSAYLSTLFSMRNRVLVASDW 546
Query: 271 ATTFVFGRDISR 282
+FGRD++R
Sbjct: 547 LKVKLFGRDLAR 558
>gi|296424234|ref|XP_002841654.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637900|emb|CAZ85845.1| unnamed protein product [Tuber melanosporum]
Length = 567
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 160/320 (50%), Gaps = 54/320 (16%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
++EEK RLLH VVVGGGPTGVEF+ EL DF D+++ + D HVTL+EA +L
Sbjct: 257 TQEEKERLLHMVVVGGGPTGVEFAAELQDFFEDDLKKWIPDIADDFHVTLVEALPNVLPM 316
Query: 66 FDDRLRHYA--TTQLSKSGVRLVRGIVKDVDSQ----KLILNDGTE----VPYGLLVWST 115
F L Y T + K VR + +VK+V + ++ DG + +PYG LVW+T
Sbjct: 317 FSKTLIEYTEKTFKDEKISVR-TKTMVKNVTDKHIEAEVTHPDGRKELQRIPYGCLVWAT 375
Query: 116 GVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 171
G +V+ L LP+ R G ++E+L V ++A+GDCS T
Sbjct: 376 GNAVRQVVRDLMSQLPQQKNSRRGLAVNEYLVVDGTDGIWALGDCSA-------TKYAPT 428
Query: 172 AQVAERQGKYLFSLLNRIGKAGG------------GRANSAKDMELGD------------ 207
AQVA +QG +L L N + + + + +D E +
Sbjct: 429 AQVASQQGAFLARLFNSMARTQALESELDHLEELSAQTTAQEDRESLEREIQKKGKAIRR 488
Query: 208 -----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRN 262
PF Y H GS+A IG +A+ D+ + L+ G L++L WRSAYL+ + RN
Sbjct: 489 VKQLSPFEYSHQGSLAYIGMERAVADITWF--NGNLASGGSLTYLFWRSAYLSMCFATRN 546
Query: 263 RFYVAVNWATTFVFGRDISR 282
R V ++W VFGRD+SR
Sbjct: 547 RVLVLMDWIKVKVFGRDVSR 566
>gi|146279372|ref|YP_001169530.1| hypothetical protein Rsph17025_3344 [Rhodobacter sphaeroides ATCC
17025]
gi|145557613|gb|ABP72225.1| hypothetical protein Rsph17025_3344 [Rhodobacter sphaeroides ATCC
17025]
Length = 455
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 146/265 (55%), Gaps = 22/265 (8%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSF 66
EE++RL+ V+GGGPTGVE SG L++ + + + H++ D V L+EA +L F
Sbjct: 164 EERARLMTIAVIGGGPTGVELSGALAELARFTLVRDFRHIRPDAARVLLVEAGPRLLGPF 223
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
+ YA +L + GVR++ G V+ + ++ L L +G +P GL++W+ GV S L +
Sbjct: 224 QEASADYARQRLERLGVRVMTGRGVEAITAESLTL-EGETLPVGLVIWAAGVTASPLARQ 282
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
L GGRI ++E L V V A+GD + G+ LP LAQVA++QG++L
Sbjct: 283 LG-EVDRGGRIAVNERLEVVGQSRVLAMGDVALCPGEDGRP-LPGLAQVAKQQGQHL--- 337
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
G++ G S +E PF YR G+ + +GR+ A+ + +++ L+G+ +
Sbjct: 338 ----GRSLGAHLASGAPLE---PFTYRSCGNTSIVGRHAAVYETDRHR------LSGWPA 384
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNW 270
W +W ++ +V ++NR V+ W
Sbjct: 385 WALWAVVHVYLLVGFQNRIVVSFQW 409
>gi|302665451|ref|XP_003024336.1| hypothetical protein TRV_01536 [Trichophyton verrucosum HKI 0517]
gi|291188386|gb|EFE43725.1| hypothetical protein TRV_01536 [Trichophyton verrucosum HKI 0517]
Length = 575
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 160/336 (47%), Gaps = 81/336 (24%)
Query: 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDRLRH 72
LLH +VG GPTG+E + L DFI D+ + Y +KD + +TL + A +LS+FD+ L
Sbjct: 253 LLHFAIVGAGPTGIELAASLCDFIHEDLVKVYPQLKDVVRITLFDVAPTVLSTFDESLSK 312
Query: 73 YATTQLSKSGVRLVRGI--------------VKDVDSQKLIL----NDGTEVPYGLLVWS 114
YA + + GV + ++D ++ + DG E + VW+
Sbjct: 313 YAMDTMEREGVDVKTNHHIESLRWGEPNSPGPHEMDPKRCLTIKTKEDGEEG-IAMCVWA 371
Query: 115 TG----------------VGPSTLVKSLD---LPKSP-------------GGRIGIDEWL 142
TG S++++ +D K+P G + +D+ L
Sbjct: 372 TGNEMNEFINDALGKVEAFPTSSVLERMDHTPAQKTPQPAATWSVRKAEKTGALLVDDHL 431
Query: 143 RVP---------SVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAG 193
RV +++D+FA+GD + LE+ PA AQ A ++ +L LN
Sbjct: 432 RVRLQSNDGQTVTLKDIFAIGD-NCMLETNSP---PATAQSANQEAIWLAKCLN------ 481
Query: 194 GGRAN-SAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS------LAGFLSW 246
AN S + F +R+LG +A +GR +AL+ Q+ + KG + L G+ +W
Sbjct: 482 ---ANYSDTGLSRYPAFSFRNLGMIAYVGRSRALMQFPQSSQDKGKAYHLPQGLTGYAAW 538
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
LVW+ AYL+ +SWRNR + +W + +VFGRDISR
Sbjct: 539 LVWKGAYLSMSISWRNRLRILYSWISNWVFGRDISR 574
>gi|410080886|ref|XP_003958023.1| hypothetical protein KAFR_0F02920 [Kazachstania africana CBS 2517]
gi|372464610|emb|CCF58888.1| hypothetical protein KAFR_0F02920 [Kazachstania africana CBS 2517]
Length = 543
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 164/304 (53%), Gaps = 41/304 (13%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E+ RLL VVVGGGPTGVEF+ EL D+I +D+++ + V+LIEA IL+ F
Sbjct: 250 DPERRRLLSFVVVGGGPTGVEFAAELRDYIDQDLKKWVPEISSEAQVSLIEALPNILNMF 309
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN---DGTEVPYGLLVWSTGVGPSTL 122
D RL Y ++K+ + L + +VK+V+ + N + E+P+GLLVW+TG P L
Sbjct: 310 DKRLVDYTEQTVTKANIDLRLNHMVKEVNKDSISANVKGEKVEIPFGLLVWATGNAPMDL 369
Query: 123 -VKSLDLPKSPGGRIG--IDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVAERQ 178
VK ++ + + G I+E L++ +D +FA+GDC+ + K + P AQVA ++
Sbjct: 370 SVKLMNSLAAQTEKRGLLINEKLQLLGAEDSIFALGDCTFH-----KGLFPT-AQVAHQE 423
Query: 179 GKYLFSLLNRIGKAGGGR--ANSAKDMELGDP-------------------FVYRHLGSM 217
G+YL + + K + N A +G+P F YRH+G++
Sbjct: 424 GEYLARMFKELSKIDQLKWELNEA----VGNPKVIKKLNFKITRLNAQIKDFHYRHMGTL 479
Query: 218 ATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFG 277
A IG KA+VD++ + L + F W WRSAYL+ +S R R V ++W F G
Sbjct: 480 AYIGADKAVVDVQLRNKRYSLQGSPFAFWF-WRSAYLSMCISIRTRILVTLDWIKIFFLG 538
Query: 278 RDIS 281
RD S
Sbjct: 539 RDSS 542
>gi|315043442|ref|XP_003171097.1| external NADH-ubiquinone oxidoreductase 2 [Arthroderma gypseum CBS
118893]
gi|311344886|gb|EFR04089.1| external NADH-ubiquinone oxidoreductase 2 [Arthroderma gypseum CBS
118893]
Length = 563
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 161/345 (46%), Gaps = 77/345 (22%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L + + LLH +VG GPTG+E + L DFI D+ + Y +K+ I +TL + A
Sbjct: 230 LPNTDPQMQRYLLHFAIVGAGPTGIEMAASLCDFIHEDLVKVYPQLKEMIRITLFDVAPT 289
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL--------VRGIVKDVDSQKLILNDGT--------- 104
+LS+FD L YA + + GV + +R D + G
Sbjct: 290 VLSTFDQSLSKYAMDTMKREGVDVKTNHHIESLRWGEPDAPGPHAMDPKGCLTIKTKEDG 349
Query: 105 EVPYGLLVWSTG----------------VGPSTLVKSLD-LP--KSP------------- 132
E + VW+TG + S++++ +D +P +SP
Sbjct: 350 EEGIAMCVWATGNEMNEFVNDALGKVGVLPTSSVLERMDHIPAEQSPQSAVTWNVRKAKN 409
Query: 133 GGRIGIDEWLRVP---------SVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
G + +D+ LR+ +++DVFA+GD + LE+ PA AQ A ++ +L
Sbjct: 410 TGALLVDDHLRIQLQSNDGQRVTLKDVFAIGD-NCMLETNSP---PATAQSANQEALWLA 465
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS---- 239
LN A+S + F +R+LG +A +GR +AL+ Q + KG +
Sbjct: 466 RCLNA--------ADSNAGLSRSPGFSFRNLGMIAYVGRSRALMQFPQTGKDKGKASLLP 517
Query: 240 --LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
L G+ +WLVW+ AYL+ +SWRNR + +W + +VFGRDISR
Sbjct: 518 QGLTGYAAWLVWKGAYLSMSISWRNRLRILYSWISNWVFGRDISR 562
>gi|307136044|gb|ADN33896.1| NADH dehydrogenase [Cucumis melo subsp. melo]
Length = 585
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 100/166 (60%), Gaps = 13/166 (7%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L +SEEEK R LH V+VGGGPTGVEF+ EL DF + D+ Y +KDY+ +TL+EA +
Sbjct: 214 LPNLSEEEKKRTLHFVIVGGGPTGVEFAAELHDFAVEDLAALYPSLKDYVKITLLEAGDH 273
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRGIV------KDVDSQKLILNDGTEVPYGLLVWST 115
IL+ FD R+ +A + + G+ L G + K++ +++ + +P+G++VWST
Sbjct: 274 ILNMFDKRITAFAEEKFQRDGIELKTGSMVVKVTDKEISTKERATGEFVSIPFGMVVWST 333
Query: 116 GVGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCS 157
G+GP V +D K G + DEWLRV V+A+GDC+
Sbjct: 334 GIGPRPQV--IDFMKQIGQTNRRALATDEWLRVEGCDGVYALGDCA 377
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 168 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 223
LPA AQVA +QG+YL S NR+ + + G PF Y+H G A +G
Sbjct: 471 LPATAQVAAQQGEYLASCFNRMDQCEKYPEGPLRFRGTGRHRFHPFRYKHFGQFAPLGGE 530
Query: 224 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ L + S G S WL W S Y +++VSWR R V +W FVFGRD SRI
Sbjct: 531 QTAAQLPGDWISIGHST----QWL-WYSVYASKLVSWRTRILVMSDWGRRFVFGRDSSRI 585
>gi|242054605|ref|XP_002456448.1| hypothetical protein SORBIDRAFT_03g036480 [Sorghum bicolor]
gi|241928423|gb|EES01568.1| hypothetical protein SORBIDRAFT_03g036480 [Sorghum bicolor]
Length = 578
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 107/183 (58%), Gaps = 8/183 (4%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L +SEEE+ + LH VV+GGGPTGVEF+ EL DF+ D+ + Y VK Y+++++IEA
Sbjct: 209 LPNLSEEERKKNLHFVVIGGGPTGVEFAAELHDFVNEDLAKLYPDVKKYVNISVIEAGGH 268
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDGT---EVPYGLLVWSTG 116
IL+ FD R+ +A + + G+ L +VK D+ + N T VPYG+ VWSTG
Sbjct: 269 ILTMFDKRITQFAEEKFKRDGIDLKTNFKVVKVSDNDITMTNTATGEVTVPYGMAVWSTG 328
Query: 117 VGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
+G ++ G R + DEWLRV +DV+A+GDC+ + + A+ +V
Sbjct: 329 IGTRPIIMDFMKQVGQGNRRVLATDEWLRVQGCEDVYALGDCATIAQRKVMEDVAAIFRV 388
Query: 175 AER 177
A++
Sbjct: 389 ADK 391
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Query: 167 VLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGR 222
+LPA AQVA ++G+YL NR+ + G PF YRHLG A +G
Sbjct: 463 MLPATAQVALQEGRYLADCFNRMKTCEEYPEGPIRIRGTGRHRFKPFRYRHLGQFAPLGG 522
Query: 223 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
+ L + G S WL W S Y ++ SWR R V +W F+FGRD S
Sbjct: 523 EQTAYQLPGDWVHVGHST----QWL-WYSVYASKQFSWRTRMLVVSDWGKRFIFGRDSSS 577
Query: 283 I 283
I
Sbjct: 578 I 578
>gi|227818786|ref|YP_002822757.1| NADH dehydrogenase [Sinorhizobium fredii NGR234]
gi|36959043|gb|AAQ87468.1| NADH Dehydrogenase [Sinorhizobium fredii NGR234]
gi|227337785|gb|ACP22004.1| putative NADH dehydrogenase [Sinorhizobium fredii NGR234]
Length = 438
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 140/283 (49%), Gaps = 35/283 (12%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDD 68
+ +LL +VVGGGPTGVE +G +++ R + + + + V L+EA E IL +
Sbjct: 174 RHKLLTFIVVGGGPTGVELAGAIAELARRTIVRDFRRIDSSSARVVLVEAGERILPAMPC 233
Query: 69 RLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L A QL GV ++ G V D + L DGTE+ ++W+ GV S K +
Sbjct: 234 CLSRKAQRQLEGLGVEVLLGNAVASCDDSGVRLADGTEIGSACILWAAGVMASRAGKWIG 293
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
GR+ +DE L P ++F +GD + + G+ V P +A A++ G+Y
Sbjct: 294 AAADRAGRVIVDERLNPPGHSEIFVIGDTASVTGADGRPV-PGVAPAAKQMGRY------ 346
Query: 188 RIGKAGGGRANSAKDMELGD-------PFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 240
A M LGD PF YR G++ATIGR A+ D R+ + L
Sbjct: 347 ------------AARMILGDIAGRPSAPFRYRDYGNLATIGRKAAVADFRRAR------L 388
Query: 241 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+G+ +WLVW A+L +V +RNR V ++WA ++ +R+
Sbjct: 389 SGYAAWLVWNFAHLWFLVGFRNRLMVFLDWAVAYLRNDRAARL 431
>gi|365879909|ref|ZP_09419305.1| NADH dehydrogenase protein [Bradyrhizobium sp. ORS 375]
gi|365292047|emb|CCD91836.1| NADH dehydrogenase protein [Bradyrhizobium sp. ORS 375]
Length = 416
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 134/263 (50%), Gaps = 20/263 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDD 68
+ +L+ V+VGGGPTGVE +G ++D + + H+ V LIEA + +LS+F D
Sbjct: 156 RQKLMTFVIVGGGPTGVEMAGSIADIAQNVLAGDFRHIDPQSAKVVLIEAGQRLLSNFAD 215
Query: 69 RLRHYATTQLSKSGVRLVR-GIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L Y L + V ++ V + + L++ + L+W+ GV + +
Sbjct: 216 ELSDYTRKALRRMNVDVITDAAVTECTRDSVTLSNRRHIACCSLLWAAGVRATPAADWIG 275
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
GRI +D+ LRVP ++FAVGD + S+G +P LA A++ G+Y+ L+
Sbjct: 276 AKSDRAGRIVVDDHLRVPPHTNIFAVGDIAA--ASSGGKPVPGLAPAAKQMGRYVGELI- 332
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
G GG + K + PFVYRH G +ATIGR A+V L K L L G L W
Sbjct: 333 -CGDIVGG---ARKPL----PFVYRHQGDLATIGRKSAVVSL------KHLKLTGLLGWT 378
Query: 248 VWRSAYLTRVVSWRNRFYVAVNW 270
W ++ ++ RNR VA+NW
Sbjct: 379 FWGVVHIYFLIGLRNRITVALNW 401
>gi|410865081|ref|YP_006979692.1| Pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acidipropionici ATCC 4875]
gi|410821722|gb|AFV88337.1| Pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acidipropionici ATCC 4875]
Length = 449
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 140/280 (50%), Gaps = 24/280 (8%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSS 65
+ +K+R ++VGGGPTGVE +G L++ + + V D +HVTL+E +L+
Sbjct: 161 DTDKTRSFDVIIVGGGPTGVETAGTLAEMKSVGIPAIFPDVSIDRVHVTLVEMGPHLLAP 220
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
FD LRHY QL + GV + +K++ ++L DG +P +++W+ GVG
Sbjct: 221 FDAGLRHYTRKQLQRRGVDVRTETAIKEIREDSVLLGDGQTLPADMVIWAAGVGAHKKAV 280
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
GGRI D+ LRV +FAVGD + E+ LP LAQ A ++G+ + S
Sbjct: 281 GWGFETGRGGRIVTDKNLRVHGQDRIFAVGDGAIIDENP----LPQLAQPAIQEGELVAS 336
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
+ + + E F Y G+MATIGR A+V+L + G GF
Sbjct: 337 QVVHLERG-----------EALQEFSYVDKGTMATIGRNAAVVEL-----ANGPKFTGFP 380
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRDISRI 283
+WLVW ++ ++ RNR VN + ++ F R+ I
Sbjct: 381 AWLVWVMIHIYSLLGGRNRIQAMVNLGSRYLTFNREAGAI 420
>gi|254577477|ref|XP_002494725.1| ZYRO0A08228p [Zygosaccharomyces rouxii]
gi|238937614|emb|CAR25792.1| ZYRO0A08228p [Zygosaccharomyces rouxii]
Length = 540
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 157/299 (52%), Gaps = 32/299 (10%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
S+ E+ RLL VVVGGGPTGVE + EL D++ +D+++ + I VTL EA IL+
Sbjct: 249 SDPERQRLLTFVVVGGGPTGVELAAELKDYVDQDLKKWMPGLSKEIKVTLAEALPNILNM 308
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG---TEVPYGLLVWSTGVGPST 121
FD L YA + + L + +VK VD + G EVPYG+LVW+TG P
Sbjct: 309 FDRSLVEYAQDLFKQEKIDLWLNTMVKSVDKTHIRAKCGDEMIEVPYGVLVWATGNAPRD 368
Query: 122 LVKSLDLPKSP-GGRIG--IDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVAER 177
+ K+L P R G I+E L++ +D +FA+GDC+ Y + P AQVA +
Sbjct: 369 VTKNLMNKLEPQDSRRGLLINEKLQLLGAEDSIFAIGDCTFY-----PGLFPT-AQVAHQ 422
Query: 178 QGKYLFSLLNRI-------------GKAGGGRANSAKDMELGD--PFVYRHLGSMATIGR 222
+G+YL L +I + S D GD F Y H+G++A IG+
Sbjct: 423 EGEYLAKALKKIHGVDQLKWQIAQAAEEDKQMLESRLDKLQGDFEHFKYNHMGALAYIGK 482
Query: 223 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
KA+ D+ + LAG ++L W+SAYL +S+RNR VA++W + GRD S
Sbjct: 483 EKAIADVSFGQSQ--YKLAGSFTFLFWKSAYLAMCLSFRNRVLVAMDWCKVYFLGRDSS 539
>gi|46579576|ref|YP_010384.1| pyridine nucleotide-disulfide oxidoreductase [Desulfovibrio
vulgaris str. Hildenborough]
gi|387152941|ref|YP_005701877.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Desulfovibrio vulgaris RCH1]
gi|46448991|gb|AAS95643.1| pyridine nucleotide-disulfide oxidoreductase [Desulfovibrio
vulgaris str. Hildenborough]
gi|311233385|gb|ADP86239.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Desulfovibrio vulgaris RCH1]
Length = 439
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 137/274 (50%), Gaps = 25/274 (9%)
Query: 7 SEEEKSR-LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEANE-IL 63
S+ E+ R +L VVGGGPTGVE++G L++ + +R+ + + + + V L+EA +L
Sbjct: 148 SDPERRRAMLTFTVVGGGPTGVEYAGALAELVRAPLRKDFPELDMNEVRVVLLEAAPGVL 207
Query: 64 SSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
F +RLR YA +L GV + + V +V + ++ G +P +VW+ GV +
Sbjct: 208 GGFPERLRGYAKKRLGAMGVDVRLDASVAEVTAAGVLFASGEHLPTHTVVWTAGVRGEVV 267
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
+ + LP GGR+ + L+V + +VF VGD S P Q + +
Sbjct: 268 AEHMGLPLGRGGRVAVLSTLQVEGLPEVFVVGDMSLPEGQNPPMNAPNATQQGRLAAENI 327
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
++L R PF YR G+MATIGR A+V + + +G
Sbjct: 328 LAMLQRRDPV---------------PFRYRDKGAMATIGRQAAVVRM------GNFAFSG 366
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 276
FL+WL+W +L ++ +RNR V +NWA ++F
Sbjct: 367 FLAWLLWLFVHLAYLIGFRNRLIVLINWAWDYLF 400
>gi|422294398|gb|EKU21698.1| NADH dehydrogenase [Nannochloropsis gaditana CCMP526]
Length = 578
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 156/311 (50%), Gaps = 38/311 (12%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
+ +S EEK R+L VVVGGGPTGVEFSGE SDF+ RD+ + Y + D + +I+A +
Sbjct: 276 MPSVSMEEKKRILSFVVVGGGPTGVEFSGEFSDFLNRDLAKYYPALVDLVSFKIIQAGSR 335
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLV--RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
IL FD L+ L G+ ++ R ++K V+ + + L+ G +PYGL VW+ G P
Sbjct: 336 ILPVFDAALQEQGLEVLKAQGIEVMLNRKVLK-VEEKHIELDGGEILPYGLCVWAAGTAP 394
Query: 120 STLVKSL--DLPKSPG------GRIGIDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPA 170
+ KSL +P+ GR+ +D WLRV + A+GD +E G LPA
Sbjct: 395 RDITKSLIAAIPEQSASTAGQRGRLSVDRWLRVQGTNGSILALGDA---VEVEGLP-LPA 450
Query: 171 LAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMEL------------------GDPFVYR 212
QVA + G +L LLNR + N D+E F +
Sbjct: 451 TGQVAAQHGAFLGRLLNR--EYDLSTPNPTFDLEKVNAFGKVANVLRLRGRLEAQAFSFL 508
Query: 213 HLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWAT 272
+LG +A +G+ AL ++ G L+WRS YL + VS RNR V +W
Sbjct: 509 NLGLLAYVGQANALAQVQTGNLKFG-EYTARAGNLLWRSVYLVKQVSTRNRVLVLNDWLR 567
Query: 273 TFVFGRDISRI 283
T VFGRDISR
Sbjct: 568 TRVFGRDISRF 578
>gi|282853202|ref|ZP_06262539.1| pyridine nucleotide-disulphide oxidoreductase [Propionibacterium
acnes J139]
gi|386070693|ref|YP_005985589.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes ATCC 11828]
gi|422389583|ref|ZP_16469680.1| NADH dehydrogenase [Propionibacterium acnes HL103PA1]
gi|422457940|ref|ZP_16534598.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL050PA2]
gi|422463608|ref|ZP_16540221.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL060PA1]
gi|422466751|ref|ZP_16543313.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL110PA4]
gi|422468484|ref|ZP_16545015.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL110PA3]
gi|422565925|ref|ZP_16641564.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL082PA2]
gi|422576706|ref|ZP_16652243.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL001PA1]
gi|282582655|gb|EFB88035.1| pyridine nucleotide-disulphide oxidoreductase [Propionibacterium
acnes J139]
gi|314922488|gb|EFS86319.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL001PA1]
gi|314965567|gb|EFT09666.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL082PA2]
gi|314982727|gb|EFT26819.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL110PA3]
gi|315091383|gb|EFT63359.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL110PA4]
gi|315094318|gb|EFT66294.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL060PA1]
gi|315105040|gb|EFT77016.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes HL050PA2]
gi|327329110|gb|EGE70870.1| NADH dehydrogenase [Propionibacterium acnes HL103PA1]
gi|353455059|gb|AER05578.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes ATCC 11828]
Length = 460
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSS 65
+ ++ + ++VGGGPTGVE +G L++ + + V D +HVTL+E AN +L
Sbjct: 168 DTQRDKTFDVIIVGGGPTGVEMAGTLAEMKSIGIPAIFPGVSTDRVHVTLVEMANHLLMP 227
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
FD LRHY QL K GV + + +V ++L DG +P +++W+ GVG V
Sbjct: 228 FDPALRHYTRRQLQKRGVDVRTNTAIAEVRENSVLLKDGQTLPADMVIWAAGVGAHKSVT 287
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
+ + GGRI + L V +FAVGD + E P LAQ A + G+ +
Sbjct: 288 NWGFEQGRGGRIATNGTLLVKGQDRIFAVGDGAINTEDPK----PQLAQPAIQGGECV-- 341
Query: 185 LLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
A +ELG+P F Y G+MATIGR A+V L S+ L
Sbjct: 342 ------------ARQIVHLELGEPLEKFEYNDKGTMATIGRNSAVVQL-----SEKLKFT 384
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRDISRI 283
G +WL W + ++ ++ RNR +N ++ F R+ I
Sbjct: 385 GIGAWLTWVTVHIFTLLGGRNRLQAMINLGARYIAFHREAGAI 427
>gi|440731632|ref|ZP_20911628.1| NADH dehydrogenase [Xanthomonas translucens DAR61454]
gi|440371512|gb|ELQ08353.1| NADH dehydrogenase [Xanthomonas translucens DAR61454]
Length = 430
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 148/279 (53%), Gaps = 27/279 (9%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
++ L +VGGG TGVE +G L++ ++ + + V LIEA +L+SF +
Sbjct: 151 RAAWLSFAIVGGGLTGVELAGTLAEIARHTLKHEFRRIDPAQAKVRLIEAGPRVLASFPE 210
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
RL A QL K GV ++ G+ V D+D+ L T VP +VW+ GV S L ++LD
Sbjct: 211 RLSAKAQKQLEKLGVDVLTGVPVADIDASGYRLGS-TFVPARTVVWAAGVAASPLGRTLD 269
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ + L +P +VF GD + ++ GK V P +A A++ G+++
Sbjct: 270 VPLDRSGRVQVQPDLSIPGHPEVFVAGDLAALQQADGKPV-PGVAPAAKQMGRHV----- 323
Query: 188 RIGKAGGGRANSAKDM--ELGD-PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
AG N AK + E GD PF Y G++ATIGR A+V L + L L+G L
Sbjct: 324 ----AG----NLAKRLRGEPGDAPFRYADYGNLATIGRMAAIVHLGR------LQLSGLL 369
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W W +A++ ++ +RNR V +NWA + + +RI
Sbjct: 370 AWWFWLAAHVFFLIGFRNRLVVLLNWAWAYWSYQRAARI 408
>gi|429736929|ref|ZP_19270804.1| pyridine nucleotide-disulfide oxidoreductase [Selenomonas sp. oral
taxon 138 str. F0429]
gi|429153711|gb|EKX96484.1| pyridine nucleotide-disulfide oxidoreductase [Selenomonas sp. oral
taxon 138 str. F0429]
Length = 428
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 137/283 (48%), Gaps = 22/283 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--IHVTLIEA-NEILSS 65
E + R L+ V+VGGG TG+E +G L + I D+ ++ H D+ +HVTL+EA +L
Sbjct: 154 EARQRHLNFVIVGGGATGIEMAGALMELI--DIFKKEFHTIDFKEVHVTLLEAMGSVLPM 211
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
L+ + L K GV + + V + D L LN+G +P ++W+ GV +K
Sbjct: 212 VPPDLQQHTIDVLRKKGVDVRLNTAVTEYDGNDLKLNNGEVIPTKTVIWAAGVRAQDFIK 271
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGY----LESTGKTVLPALAQVAERQGK 180
GR+ ++E L V +FA+GDC+ + LE TV P Q A + K
Sbjct: 272 DCGAEVDRAGRVIVEENLLVKGSDRIFAIGDCANFQHGGLERPLPTVAPVATQEAMQVKK 331
Query: 181 YLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 240
+ +L+ + K + + FVY LG+MATIGR +A+++ L
Sbjct: 332 NIMALI------------AGKTPDQLEKFVYHDLGAMATIGRGEAVMNGPMPGLGFMLKA 379
Query: 241 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
GF +W W +L R+ F V++ W F FG ++RI
Sbjct: 380 KGFFAWFAWMLVHLVRLAGRYADFTVSIKWIWNFFFGTRLARI 422
>gi|418403630|ref|ZP_12977114.1| NADH dehydrogenase (ubiquinone) [Sinorhizobium meliloti CCNWSX0020]
gi|359502387|gb|EHK74965.1| NADH dehydrogenase (ubiquinone) [Sinorhizobium meliloti CCNWSX0020]
Length = 422
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 147/282 (52%), Gaps = 24/282 (8%)
Query: 8 EEEKSR---LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EI 62
EE+ +R LL ++G GPTGVE +G +++ R + + + + V L+EA I
Sbjct: 148 EEDPARRDALLTFTIIGAGPTGVELAGIIAEMAHRTLPGEFRRIDTRLARVVLVEAGPRI 207
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPST 121
L +F + L YA+ +L K GV ++ G V D + + + + + VP LVW+ GV S
Sbjct: 208 LPAFSEELSAYASRELEKLGVEVLTGTPVTDCTDEGVTIGE-SFVPSRTLVWAAGVQASP 266
Query: 122 LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 181
+ L GR+ + L P D+F +GD + ++ GK V P +A A++QG Y
Sbjct: 267 AARWLGADADRAGRVKVGPDLTAPHRPDIFVIGDTASVIQEDGKPV-PGIAPAAKQQGAY 325
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
+ ++ G+ G A PF YRH GS+ATIG+ A++D + K L
Sbjct: 326 VAQVIR--GRLTGSPAPG--------PFRYRHQGSLATIGKRAAIIDFGRIK------LR 369
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G L+W +W A++ ++ R+RF VA +W T++ G+ +R+
Sbjct: 370 GSLAWWIWGIAHIYFLIGTRSRFAVAWSWLWTYLSGQHSARL 411
>gi|317025716|ref|XP_001389655.2| hypothetical protein ANI_1_1692014 [Aspergillus niger CBS 513.88]
Length = 1489
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 159/349 (45%), Gaps = 85/349 (24%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L S E +S LLH +VG GPTG E + L DFI++D+ Y +K ++L + A +
Sbjct: 1156 LPTTSPELRSYLLHFAIVGAGPTGTELAASLRDFIVKDLVALYPALKGIPRISLYDIAPK 1215
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-----VRGI---------VKDVDSQK---LILNDGT 104
+LS FD++L YA + K G+ + V+ + ++D ++ L +
Sbjct: 1216 VLSMFDEKLSQYAMDTMQKEGIEIKPSHHVQSLRWGEPGAEPPYEMDPKRCLTLTTEEEG 1275
Query: 105 EVPYGLLVWSTGVGPSTLVKSL----------------------------------DLPK 130
EV G+ VW+TG + V+ + K
Sbjct: 1276 EVGVGMCVWATGNAMNKFVRDALTTVDEYPSKSAHLISPSSSTTTDPQPTTTNTTWHVKK 1335
Query: 131 SPG-GRIGIDEWLRV---------PS---VQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
+P G + +D LRV P +QDV+A+GD + + TG PA AQ +
Sbjct: 1336 APKVGALLVDGHLRVQLESSDESNPQTAILQDVYALGDNA--MPETGAP--PATAQATFQ 1391
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
+ K+L + LN+ D PF +R++G++A IG KAL+ + +K G
Sbjct: 1392 EAKWLATRLNK------------DDFATAPPFSFRNMGTLAYIGDAKALMQIPHDKGDGG 1439
Query: 238 L----SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
L G ++WLVW SAYLT +SWRN+ V W +FGRD+SR
Sbjct: 1440 RYLPEGLTGRMAWLVWNSAYLTMSISWRNKLRVGFRWFLNQIFGRDVSR 1488
>gi|449444399|ref|XP_004139962.1| PREDICTED: NAD(P)H dehydrogenase B2, mitochondrial-like [Cucumis
sativus]
gi|449475728|ref|XP_004154535.1| PREDICTED: NAD(P)H dehydrogenase B2, mitochondrial-like [Cucumis
sativus]
Length = 585
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 99/166 (59%), Gaps = 13/166 (7%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L +SEEEK R LH V+VGGGPTGVEF+ EL DF + D+ Y +KDY+ +TL+EA +
Sbjct: 214 LPNLSEEEKKRTLHFVIVGGGPTGVEFAAELHDFAVEDLAALYPSLKDYVKITLLEAGDH 273
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRGIV------KDVDSQKLILNDGTEVPYGLLVWST 115
IL+ FD R+ +A + + G+ L G + K++ +++ + +PYG++VWST
Sbjct: 274 ILNMFDKRITAFAEEKFQRDGIELKTGSMVVKVTDKEISTKESATGEFVSIPYGMVVWST 333
Query: 116 GVGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCS 157
G+GP V +D G + DEWLRV V+A+GDC+
Sbjct: 334 GIGPRPQV--IDFMNQIGQTNRRALATDEWLRVEGCDGVYALGDCA 377
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 168 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 223
LPA AQVA +QG+YL S +R+ + + G PF Y+H G A +G
Sbjct: 471 LPATAQVAAQQGEYLASCFSRMDQCEKYPEGPLRFRGTGRHRFHPFRYKHFGQFAPLGGE 530
Query: 224 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ L + S G S WL W S Y +++VSWR R V +W FVFGRD SRI
Sbjct: 531 QTAAQLPGDWISIGHST----QWL-WYSVYTSKLVSWRTRILVISDWGRRFVFGRDSSRI 585
>gi|326503052|dbj|BAJ99151.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 573
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 135/252 (53%), Gaps = 26/252 (10%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L +++EE+ + +H VV+GGGPTGVEF+ EL DF+ D+ + Y VK Y+++++IEA +
Sbjct: 209 LPNLTDEERKKNVHFVVIGGGPTGVEFAAELHDFVNEDLAKLYPDVKKYVNISVIEAGDH 268
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDGT---EVPYGLLVWSTG 116
IL+ FD R+ H+A + ++G+ L +VK D + N T VPYGL VWSTG
Sbjct: 269 ILTMFDKRITHFAEDKFKRTGIDLKTNFKVVKVSDKTITMSNPATGEIAVPYGLAVWSTG 328
Query: 117 VGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+G ++ +D K G + DEWLRV +V+A+GDC+ + + A+
Sbjct: 329 IGTRPMI--MDFMKQVGQANRRVLATDEWLRVQGCDNVYALGDCATITQRKVMEDVDAIF 386
Query: 173 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFV-YRHLGSMATIGRYKALVDLRQ 231
+VA++ +G K++ LGD + Y + + K DL +
Sbjct: 387 RVADKDN------------SGTLTVKKIKNV-LGDIYQRYPQVELYLKTNQMKGFNDLLK 433
Query: 232 NKESKGLSLAGF 243
+KES+ L++ F
Sbjct: 434 DKESEELNIEEF 445
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 167 VLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGR 222
+LPA AQVA ++G YL NR+ + G PF YRHLG A +G
Sbjct: 458 MLPATAQVAAQEGAYLADCFNRLNTCEENPEGPLRIRGAGRHRFKPFRYRHLGQFAPLGG 517
Query: 223 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
+ L + G S WL W S Y ++ SWR V +W F+FGRD S
Sbjct: 518 EQTAAQLPGDWVHVGHST----QWL-WYSVYASKQFSWRTGMLVVTDWGRRFLFGRDSSS 572
Query: 283 I 283
+
Sbjct: 573 L 573
>gi|380512505|ref|ZP_09855912.1| NADH dehydrogenase (ubiquinone) [Xanthomonas sacchari NCPPB 4393]
Length = 430
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 141/272 (51%), Gaps = 21/272 (7%)
Query: 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFDDRLRH 72
L +VGGGPTGVE +G L++ ++ + + V LIEA +LSSF + L
Sbjct: 160 LSFAIVGGGPTGVELAGTLAEIARHTLKHEFRRIDPAEARVRLIEAGPRVLSSFPEHLSA 219
Query: 73 YATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 131
A QL K GV ++ G+ V D+D+ L T VP +VW+ GV S L K+L P
Sbjct: 220 KAQKQLEKLGVEVLTGVPVADIDASGYRLGS-TFVPARTVVWAAGVAASPLAKTLQTPLD 278
Query: 132 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191
GR+ + L VP ++F GD + ++ G+ V P +A A++ G+++ L R +
Sbjct: 279 RSGRVQVQPDLSVPGHPELFVAGDLAAVQQADGRPV-PGVAPAAKQMGRHVADTLRR--R 335
Query: 192 AGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRS 251
G A+ PF Y G++ATIGR A+V L + L L+G L+W W +
Sbjct: 336 LRGDTASV--------PFRYADYGNLATIGRMAAIVHLGR------LQLSGVLAWWFWLA 381
Query: 252 AYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
A++ ++ +RNR V +NWA + + +RI
Sbjct: 382 AHVFFLIGFRNRVVVLLNWAWAYWSYQRAARI 413
>gi|302499050|ref|XP_003011521.1| hypothetical protein ARB_02072 [Arthroderma benhamiae CBS 112371]
gi|291175073|gb|EFE30881.1| hypothetical protein ARB_02072 [Arthroderma benhamiae CBS 112371]
Length = 575
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 159/336 (47%), Gaps = 81/336 (24%)
Query: 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDRLRH 72
L H +VG GPTG+E + L DFI D+ + Y +K+ I +TL + A +LS+FD+ L
Sbjct: 253 LFHFAIVGAGPTGIELAASLCDFIHEDLVKVYPQLKEMIRITLFDVAPTVLSTFDESLSK 312
Query: 73 YATTQLSKSGVRLVRGI--------------VKDVDSQKLIL----NDGTEVPYGLLVWS 114
YA + + GV + ++D ++ + DG E + VW+
Sbjct: 313 YAMDTMEREGVDVKTNHHIESLRWGEPNSPGPHEMDPKRCLTIKTKEDGEE-GIAMCVWA 371
Query: 115 TG----------------VGPSTLVKSLD---LPKSP-------------GGRIGIDEWL 142
TG S++++ +D +SP G + +D+ L
Sbjct: 372 TGNEMNEFVNDALGKVEAFPTSSVLERMDHTPAEQSPHSAATWSVRKAEKTGALLVDDHL 431
Query: 143 RVP---------SVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAG 193
RV +++DVFA+GD + LE+ PA AQ A ++ +L LN
Sbjct: 432 RVQLQSNDGQTVTLKDVFAIGD-NCMLETNSP---PATAQSANQEAIWLAKCLN------ 481
Query: 194 GGRAN-SAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS------LAGFLSW 246
AN S + F +R+LG +A +GR +AL+ Q+ + KG + L G+ +W
Sbjct: 482 ---ANESDTGLSRYPAFSFRNLGMIAYVGRSRALMQFPQSSQDKGKAAHLPQGLTGYAAW 538
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
LVW+ AYL+ +SWRNR + +W + +VFGRDISR
Sbjct: 539 LVWKGAYLSMSISWRNRLRILYSWISNWVFGRDISR 574
>gi|45188135|ref|NP_984358.1| ADR262Cp [Ashbya gossypii ATCC 10895]
gi|44982952|gb|AAS52182.1| ADR262Cp [Ashbya gossypii ATCC 10895]
gi|374107573|gb|AEY96481.1| FADR262Cp [Ashbya gossypii FDAG1]
Length = 533
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/300 (36%), Positives = 160/300 (53%), Gaps = 34/300 (11%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
++ E+ RLL VVVGGGPTGVEF+ EL D++ +D+ + + I VTL EA IL+
Sbjct: 242 NDPERKRLLSFVVVGGGPTGVEFAAELQDYVDQDLSKWMPELSKEIKVTLCEALPNILNM 301
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG---TEVPYGLLVWSTGVGP-- 119
FD L YA + + L V +VK+V + + G E+PYG+LVW+TG P
Sbjct: 302 FDKSLWQYAQDLFKQEKIDLKVNTMVKNVTATHITTKCGDQLEELPYGVLVWATGNAPRD 361
Query: 120 --STLVKSLDLPKSPGGRIGIDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVAE 176
+L+K LD SP G + I++ L++ +D ++A+GDC+ Y + P AQVA
Sbjct: 362 VSKSLMKKLDQQTSPRGLL-INDKLQLLGAEDSIYAMGDCTFY-----PGLFPT-AQVAH 414
Query: 177 RQGKYLFSLLNRIGKAGGGR---------------ANSAKDMELGDPFVYRHLGSMATIG 221
++G+YL +L + K R A K PF Y H G++A IG
Sbjct: 415 QEGEYLAHVLKKQHKIDHLRWQLADAEPSQVPRITARLEKAEAAIQPFKYNHQGALAYIG 474
Query: 222 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
KA+ D+ ESK LAG ++L W+S+YL +S+RNR VA++W GRD S
Sbjct: 475 SEKAIADIAIG-ESK-YRLAGSWTFLFWKSSYLVMCLSFRNRILVALDWLKVSFLGRDSS 532
>gi|401840143|gb|EJT43051.1| NDE2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 545
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 163/302 (53%), Gaps = 34/302 (11%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILS 64
+++ E+ RLL VVVGGGPTGVEF+ EL D++ +D+R+ + + V LIEA IL+
Sbjct: 251 VNDPERRRLLTFVVVGGGPTGVEFAAELQDYVNQDLRKWMPDLSQEMSVILIEALPNILN 310
Query: 65 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKL-ILNDG---TEVPYGLLVWSTGVGP 119
FD L YA ++ + LV VK V+ + L + T +PYG+LVW+TG P
Sbjct: 311 MFDKTLIKYAEDIFARDEIDLLVNTAVKVVEPTYIRTLQNSQTTTNIPYGMLVWATGNEP 370
Query: 120 STLVKSL--DLPKSPGGR-IGIDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVA 175
L K+L +P+ R + I++ L + +D ++A+GDC+ + TG P AQVA
Sbjct: 371 IELSKTLMGRIPEQTNKRGLLINDKLELLGAEDSIYAIGDCTAH---TG--FFPT-AQVA 424
Query: 176 ERQGKYLFSLLNR---IGKAGGGRANSAKDMELG-------------DPFVYRHLGSMAT 219
++G+YL +L++ I + NS + ++ D F Y+H+G++A
Sbjct: 425 HQEGEYLSKILDKKLQIEQMEWDMQNSTDNAKMTRLQKEIDVKKSKLDKFNYKHMGALAY 484
Query: 220 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
IG A+ DL S L G ++L W+SAYL +S RNR +A++W + GRD
Sbjct: 485 IGSETAIADLHMGDSS--YQLKGMFAFLFWKSAYLAMCLSIRNRILIAMDWTKVYFLGRD 542
Query: 280 IS 281
S
Sbjct: 543 SS 544
>gi|405118144|gb|AFR92919.1| NADH dehydrogenase [Cryptococcus neoformans var. grubii H99]
Length = 553
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/305 (35%), Positives = 155/305 (50%), Gaps = 54/305 (17%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
++E RL+H VVVGGGPTGVE++GEL DF++ +TLIEA +L +F
Sbjct: 272 QDEIDRLMHMVVVGGGPTGVEYAGELHDFLI---------------ITLIEALPNVLPAF 316
Query: 67 DDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPST 121
+L Y + ++ + L R +VKDV +Q +I+ D E+PYGLLVW+TG
Sbjct: 317 SKQLIEYTESTFKENKIDVLTRTMVKDVKAQSVIVQDANKEIREIPYGLLVWATGNTSRN 376
Query: 122 LVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
+ + L L R G +D+ L + + V+AVGDC+ T AQVA +
Sbjct: 377 ITRDLMTKLSHVQTQRRGLLVDDNLALLGAEGVYAVGDCTA-------TSYAPTAQVASQ 429
Query: 178 QGKYLFSLLNRIGKAG-------GGRANSAKDMELGD-------------PFVYRHLGSM 217
QG YL S+ ++G+ RA+ D + PF Y H GS+
Sbjct: 430 QGIYLASIFQKLGQKAKLEKQLAALRADPTADASEIESLTKKVNRASKITPFHYSHQGSL 489
Query: 218 ATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFG 277
A IG KA+ DLR + ++ G + L WRSAY++ + S RNR V +W +FG
Sbjct: 490 AYIGSEKAIADLRLF--NGNVASGGSAAMLFWRSAYVSTLYSVRNRTLVLTDWLKVKLFG 547
Query: 278 RDISR 282
RD+SR
Sbjct: 548 RDVSR 552
>gi|86358364|ref|YP_470256.1| NADH dehydrogenase [Rhizobium etli CFN 42]
gi|86282466|gb|ABC91529.1| NADH dehydrogenase protein [Rhizobium etli CFN 42]
Length = 421
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 146/278 (52%), Gaps = 25/278 (8%)
Query: 11 KSRLLHCVVVGGGPTGVEFSG---ELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSF 66
+ LL +VG GPTGVE +G EL+ F + D + K V L+EA +L +F
Sbjct: 153 RDALLTFTIVGAGPTGVELAGIIAELAHFTLPDEFRNIDTRK--TRVVLVEAGPRVLPTF 210
Query: 67 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
+ L YA L K GV ++ G V + + + + + T +P +VW+ GV S +
Sbjct: 211 AEELSAYAQKALEKLGVEVLLGKPVTECAADGVQIGE-TFIPSRTIVWAAGVTASPAARW 269
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
L++P GR+ +++ L P + DVF +GD + + GK V P +A A++QG Y+ +
Sbjct: 270 LNVPADRAGRVVVEKDLSAPGLPDVFVIGDTASVMRDNGKPV-PGIAPAAKQQGAYVAKV 328
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
+ + G A + PF YRH GS+ATIG+ A++D Q K L G+++
Sbjct: 329 IR--ARLSGKPAPA--------PFKYRHQGSLATIGKSAAIIDFGQIK------LKGWIA 372
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W +W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 373 WWIWGIAHIYFLIGTRSRFSVAWSWLWIYLSGQHSARL 410
>gi|386810965|ref|ZP_10098191.1| pyridine nucleotide-disulphide oxidoreductase [planctomycete KSU-1]
gi|386405689|dbj|GAB61072.1| pyridine nucleotide-disulphide oxidoreductase [planctomycete KSU-1]
Length = 416
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 141/261 (54%), Gaps = 25/261 (9%)
Query: 28 EFSGELSDFIMRDVRQRYS--HVKDYIHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVR 84
EF+G L++ + + + Y VKD I + LIEA + +LS+F +L+ YA +L + G+
Sbjct: 167 EFTGALAELVHHVLSKDYPELQVKD-IRIILIEAGDSLLSNFPKKLQDYALFKLHRMGIE 225
Query: 85 L-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLR 143
+ ++ V +S +++L DGT +P L W+ GV S+L +L + K GGRI + + L
Sbjct: 226 VRLKTAVSGAESHQVLLKDGTSIPSRTLFWAAGVRASSLADALPVMKVRGGRIIVKQDLT 285
Query: 144 VPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDM 203
+ +VF +GD + YLE + LP +A VA +QG+Y AG +
Sbjct: 286 IEGYPNVFVIGDMA-YLEQD-RQPLPMIAPVAMQQGEY----------AGRAILQGERGR 333
Query: 204 ELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
+G PF YR GSMATIGR A+ + G S +GF +W++W + +L ++ +RNR
Sbjct: 334 PIG-PFYYRDRGSMATIGRGAAVA------HTMGFSFSGFSAWVIWLALHLFFLIGFRNR 386
Query: 264 FYVAVNWA-TTFVFGRDISRI 283
V +NW F+ R I I
Sbjct: 387 IVVLLNWGYEYFLLKRQIRII 407
>gi|401626294|gb|EJS44247.1| nde1p [Saccharomyces arboricola H-6]
Length = 560
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 160/304 (52%), Gaps = 42/304 (13%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E++RLL VVVGGGPTGVEF+ EL D++ +D+R+ + I VTL+EA IL+ F
Sbjct: 268 DPERARLLSFVVVGGGPTGVEFAAELRDYVDQDLRKWMPELSKEIKVTLVEALPNILNMF 327
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG----TEVPYGLLVWSTGVGP-- 119
D L YA + + L ++ +VK VD+ + G +PYG+LVW+TG P
Sbjct: 328 DKYLVDYAQDLFKEEKIDLKLKTMVKKVDATTITAKTGGGDIESIPYGVLVWATGNAPRE 387
Query: 120 --STLVKSLDLPKSPGGRIGIDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPAL---AQ 173
+ L+ L+ S G + I+ L++ QD +FA+GDC T P L AQ
Sbjct: 388 VSTNLMSKLEEQDSRRGLL-INNKLQLLGAQDSIFAIGDC---------TFHPGLFPTAQ 437
Query: 174 VAERQGKYL---FSLLNRIGKAGGGRANSAKDMELG-------------DPFVYRHLGSM 217
VA ++G+YL F RI + +N D D F Y H G++
Sbjct: 438 VAHQEGEYLAQYFKKAYRIDQLNWKISNIKDDSGASKLKDQITKIESQIDDFKYNHKGAL 497
Query: 218 ATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFG 277
A IG KA+ DL E+K LAG ++L W+SAYL +S+RNR VA++WA + G
Sbjct: 498 AYIGSDKAIADLAVG-EAK-YRLAGSFTFLFWKSAYLAMCLSFRNRVLVAMDWAKVYFLG 555
Query: 278 RDIS 281
RD S
Sbjct: 556 RDSS 559
>gi|418684471|ref|ZP_13245655.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|410740671|gb|EKQ85385.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
Length = 422
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 150/284 (52%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN- 60
L+G E KS LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA+
Sbjct: 149 LSGDPEVVKS-LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHKIDPALSKITLIEASP 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L +FD L + +L + GV ++ G V D++ Q + L +G +P ++W+ GV
Sbjct: 208 RLLMTFDPSLGEFTKKRLERRGVEVLTGTRVIDINEQGVQL-EGKMIPTQTVIWAAGVQA 266
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+++ +L GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG
Sbjct: 267 NSIASTLGTTLDRGGRVIVDEFCNIEGHSEVFVIGDIASYSKGLERP-LPGVSPVAMQQG 325
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
KY+ SL+ N K+ + PF Y GSMATIGR A+ + L
Sbjct: 326 KYVASLIQ----------NDLKNKKR-KPFHYIDKGSMATIGRTDAVAQVGI------LK 368
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G WL W +L V ++N+ + + W +++ R +R+
Sbjct: 369 MKGLFGWLAWLFVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|421128816|ref|ZP_15589027.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
str. 2008720114]
gi|410359928|gb|EKP06968.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
str. 2008720114]
Length = 422
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 150/284 (52%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN- 60
L+G E KS LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA+
Sbjct: 149 LSGDPEVVKS-LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHKIDPALSKITLIEASP 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L +FD L + +L K GV ++ G V D++ Q + L +G +P ++W+ GV
Sbjct: 208 RLLMTFDPSLGEFTKKRLEKRGVEVLTGTRVIDINEQGVQL-EGKMIPTQTVIWAAGVQA 266
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+++ +L GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG
Sbjct: 267 NSIASTLGTTLDRGGRVIVDEFCNIEGHSEVFVIGDIASYSKGLERP-LPGVSPVAMQQG 325
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+Y+ SL+ N K+ + PF Y GSMATIGR A+ + L
Sbjct: 326 RYVASLIQ----------NDLKNKKR-KPFHYIDKGSMATIGRTDAVAQVGI------LK 368
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G WL W +L V ++N+ + + W +++ R +R+
Sbjct: 369 MKGLFGWLAWLFVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|423302244|ref|ZP_17280267.1| hypothetical protein HMPREF1057_03408 [Bacteroides finegoldii
CL09T03C10]
gi|408471335|gb|EKJ89867.1| hypothetical protein HMPREF1057_03408 [Bacteroides finegoldii
CL09T03C10]
Length = 439
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 146/274 (53%), Gaps = 33/274 (12%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEA 59
+++E+ LL+ V+VGGG TG+E +G LS+ +R+ DY +H+ LIEA
Sbjct: 155 TKQEQQELLNIVIVGGGATGIEVAGILSEM------KRFVLPNDYPDMPSSLMHIYLIEA 208
Query: 60 NE-ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV 117
+ +L+ + +A L + GV L+ V D K+IL DGTE+ +W +GV
Sbjct: 209 GQRLLAGMSEDSSLHAEKFLREMGVNILLNKRVIDYRDHKVILEDGTEIATRTFIWVSGV 268
Query: 118 GPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAE 176
T+ GGRI +D++ RV + +VFA+GD C + + P LAQVA
Sbjct: 269 TGVTIGNMNPSLIGRGGRIKVDQFNRVEGMDNVFAIGDQCIQSTDESYPNGHPQLAQVAI 328
Query: 177 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
+QG+ L L R+ K ++M+ PF YR+LGSMAT+GR +A+ + + K
Sbjct: 329 QQGELLAKNLIRLEK--------GQEMK---PFHYRNLGSMATVGRNRAVAEFSKVK--- 374
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+ G+L+W++W +L ++ RN+ V +NW
Sbjct: 375 ---MQGWLAWVMWLVVHLRSILGVRNKVVVLLNW 405
>gi|262340970|ref|YP_003283825.1| NADH dehydrogenase (quinone) [Blattabacterium sp. (Blattella
germanica) str. Bge]
gi|262272307|gb|ACY40215.1| NADH dehydrogenase (quinone) [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 431
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 136/275 (49%), Gaps = 33/275 (12%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEAN- 60
+EK RL+ V+VGGGPTGVE +G L++ +RY DY +++ L++A+
Sbjct: 156 KEKDRLMTFVIVGGGPTGVELAGALAEM------KRYVLPNDYPDLDIESMNIHLLQASP 209
Query: 61 EILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L ++ A L + GV + + +V+D D + + + ++ ++W+ GV
Sbjct: 210 RLLDGMSEKSAKQAYKNLKELGVIIWLNCLVQDYDGKIVFIEKNKKIESANVIWAAGVK- 268
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
++K G RI +D +L+ +++FA+GD + + P AQ A +QG
Sbjct: 269 GAIIKGFLKEDIKGHRILVDNYLKTIKYKNIFAIGDVAVVCMKSYPNGHPMTAQPAIQQG 328
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
YL NR+ D E PF+Y++LGSMATIGR KA+ D
Sbjct: 329 NYLAKNFNRLS-----------DQENIKPFMYKNLGSMATIGRNKAVCDF------PFFK 371
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
L GFL+W+VW +L +V +RNR NW +
Sbjct: 372 LKGFLAWIVWMFVHLVSLVGFRNRAIALTNWIIQY 406
>gi|45655611|ref|YP_003420.1| NADH dehydrogenase [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|421086668|ref|ZP_15547516.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira santarosai
str. HAI1594]
gi|421103876|ref|ZP_15564472.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Icterohaemorrhagiae str. Verdun LP]
gi|45602582|gb|AAS72057.1| NADH dehydrogenase [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|410366357|gb|EKP21749.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Icterohaemorrhagiae str. Verdun LP]
gi|410430697|gb|EKP75060.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira santarosai
str. HAI1594]
Length = 422
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 152/284 (53%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN- 60
L+G E KS LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA+
Sbjct: 149 LSGDPEVVKS-LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEASP 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L +FD L + +L + GV ++ G V D++ + + L +G +P ++W+ GV
Sbjct: 208 RLLMTFDPSLGEFTKKRLERRGVEVLTGTRVIDINERGVQL-EGKMIPTQTVIWAAGVQA 266
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+++ +LD+ GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG
Sbjct: 267 NSIAATLDVTLDRGGRVIVDEFCNIEGHSEVFVIGDIASYSKGLERP-LPGVSPVAMQQG 325
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+Y+ SL+ N K+ + PF Y GSMATIGR A+ + L
Sbjct: 326 RYVASLIQ----------NDLKNKKR-KPFHYIDKGSMATIGRTDAVAQVGI------LK 368
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G WL W +L V ++N+ + + W +++ R +R+
Sbjct: 369 MKGLFGWLAWLFVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|221633885|ref|YP_002523111.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Thermomicrobium roseum DSM 5159]
gi|221156852|gb|ACM05979.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Thermomicrobium roseum DSM 5159]
Length = 468
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 143/277 (51%), Gaps = 21/277 (7%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDD 68
E+ RLL VV+GGGPTGVE + E+ + + D + L+EA +L+ F D
Sbjct: 167 EQRRLLTVVVIGGGPTGVEVAAEIRSLFTHALPYYRAIQPDTARIVLVEALPRLLTGFPD 226
Query: 69 RLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
+ H A +L + G+ ++ G V V+ ++L+DGT + +V + GV P+ +V+S
Sbjct: 227 AVAHRAARELRQRGIEVLLGRKVIQVEPAAVVLDDGTRLESRTIVSAIGVEPNPIVRSFG 286
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLE-STGKTVLPALAQVAERQGKYLFSLL 186
LP GRI +DE+LRV +V+A+GD + ++ +TG+ P AQ A RQ K L L
Sbjct: 287 LPLDQRGRIVVDEYLRVTGHPNVWAIGDNAAVIDPATGRPYAPT-AQHAVRQAKLLARNL 345
Query: 187 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
S + L P YR G M T+G + A+ L + ++L GFL+W
Sbjct: 346 ----------VASLRSEPL-QPMRYRTRGMMVTLGDHDAIAWLGR------VTLTGFLAW 388
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+WR+ L ++ W R +A+ W +F ++ ++
Sbjct: 389 WLWRTYALLQIPRWDRRIRLAMEWTLDLLFPPELVQL 425
>gi|399043413|ref|ZP_10737713.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium sp. CF122]
gi|398058099|gb|EJL50013.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium sp. CF122]
Length = 445
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 142/277 (51%), Gaps = 22/277 (7%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSFD 67
E++R + V+VG GPTGVE + ++ +R+ + + D + L N +L +F
Sbjct: 179 ERARQMTFVLVGAGPTGVELAASMAHMAAVTLRKNFRRIDPADSTIILLEGGNRVLPTFA 238
Query: 68 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
+ L AT +L + GV+++ G+ V+ VD Q ++ G + ++W+ GV S +VK
Sbjct: 239 ETLSRKATARLEELGVKVMTGVKVEKVDEQGVVAG-GKRISSATVLWTAGVAASPIVKMF 297
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
GR+ + L VP V DVF VGD + +++ G+ V P +AQ A +QG+Y+ L+
Sbjct: 298 GADTDRAGRVIVGPCLEVPGVPDVFFVGDTASVMQN-GRPV-PGVAQAAIQQGRYVGRLI 355
Query: 187 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
N K + PF Y + G+MA +GR A++ E+ ++GFL+W
Sbjct: 356 ----------CNRLKGRDAKRPFRYSNKGNMAVVGRNFAIL------EAGRFRMSGFLTW 399
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L+W ++ + +NR V W ++ G+ SR+
Sbjct: 400 LIWAFIHMASLPQLQNRLRVEFQWLWSYFTGQRTSRL 436
>gi|403053035|ref|ZP_10907519.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Acinetobacter bereziniae LMG 1003]
Length = 430
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 147/292 (50%), Gaps = 28/292 (9%)
Query: 2 FLAGISEEEKSR-------LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD--YI 52
LA E E+++ L V++GGGPTGVE SG +++ + +D R + D
Sbjct: 141 ILAAFEEAERTKDPILRKALQTFVIIGGGPTGVELSGTIAE-LAKDTLSRDFRLIDPRES 199
Query: 53 HVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLL 111
V LIEA +LS F ++L Y L + GV +V G S+ ++ DG ++P +
Sbjct: 200 RVVLIEAGPRLLSVFPEKLSSYTRQALEQLGVEVVLGTPVTSCSEDGVVYDGKQLPAKTI 259
Query: 112 VWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 171
+W+ GV S + L++ GR+ +D L V ++F +GD + GK V P +
Sbjct: 260 IWAAGVQASPAARWLNVESDRAGRVLVDSNLTVTGHPEIFVIGDTAAVTMEDGKLV-PGI 318
Query: 172 AQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQ 231
A A++QGKY+ ++ N K ++ +PF Y H G++ATIGR +A+VD+ +
Sbjct: 319 APAAKQQGKYVAKTID----------NRLKGKDIKEPFKYHHQGNLATIGRSRAVVDMGK 368
Query: 232 NKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L G L+W W+ ++ ++ ++R VA++W G SR+
Sbjct: 369 ------FQLQGVLAWWFWKLIHIYFLIGVQSRLNVALSWLWNHSVGYRGSRL 414
>gi|219129528|ref|XP_002184939.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403724|gb|EEC43675.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 475
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 151/299 (50%), Gaps = 36/299 (12%)
Query: 18 VVVGGGPTGVEFSGELSDFIMRDVRQR---YSHVKDYIHVTLIE-ANEILSSFDDRLRHY 73
+VGGGPTGVE +GEL+DF+ + R Y +KD I + LI+ A+ ++ FD LR +
Sbjct: 180 CIVGGGPTGVELAGELADFVKDCTKPRKGSYQRLKDDIRIILIQGADSLVPQFDRDLRDH 239
Query: 74 ATTQLSKSGVRL-VRGIVKDVDSQKLILND---GTE--VPYGLLVWSTGVGPSTLVKSL- 126
A L K + + + V +V + L + G E + G+ VW+ G P + +L
Sbjct: 240 ALKTLQKQNIEVRLNTRVNEVGDGYIKLAEKGGGVEETINNGVTVWAAGTSPVPFIDTLL 299
Query: 127 -DLP---KSPGGRIGIDEWLRVPS-VQDVF----AVGDCSGYLESTGKTVLPALAQVAER 177
LP ++ GGR+ +D+WLR P+ D F +GD + + LP AQVA +
Sbjct: 300 SKLPEEARAVGGRVKVDKWLRCPTPTADTFGSILVLGDAAA--AERDDSFLPQTAQVAGQ 357
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDP-------------FVYRHLGSMATIGRYK 224
QG Y+ L NR D E D F + +LG +A +G +
Sbjct: 358 QGAYVARLFNRDYDLTQTPPVYYDDKEAIDKAWLNVRGLKEAPGFDFLNLGLLAYVGDKQ 417
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
AL + Q + S AG +S+++WRS YL + V+ RNR V+ +W + +FGRDI+R+
Sbjct: 418 ALSQV-QLGDFPIASYAGSISFVLWRSVYLVKQVATRNRVLVSFDWLKSNLFGRDITRL 475
>gi|238927409|ref|ZP_04659169.1| NADH dehydrogenase [Selenomonas flueggei ATCC 43531]
gi|238884691|gb|EEQ48329.1| NADH dehydrogenase [Selenomonas flueggei ATCC 43531]
Length = 427
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 140/279 (50%), Gaps = 15/279 (5%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--IHVTLIEA-NEILSS 65
EE+ R L+ V+VGGG TG+E +G + + I DV ++ H D+ +HVTL+EA +L
Sbjct: 154 EERLRHLNFVIVGGGATGIEMAGAIVELI--DVFKKEFHTIDFSEVHVTLLEAMGSVLPM 211
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
L+ + L K GV + + V D L+L DG +P ++W+ GV +K
Sbjct: 212 VPPDLQQHTIDVLRKKGVDVRLNTAVTAYDGNDLVLKDGEIIPTKTVIWAAGVRAQDFIK 271
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
GR+ ++E L V VFA+GDC+ + T + LP +A VA ++ + +
Sbjct: 272 DCGGEVDRAGRVIVEENLLVKGSDCVFAIGDCANFQHGTERP-LPTVAPVATQEAMQVKT 330
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
N + G + +LG FVY LG+MATIGR +A+++ + +GF
Sbjct: 331 --NIMALIAGKTPD-----QLGK-FVYHDLGAMATIGRGEAVMNGPMPVLGFNIKASGFF 382
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W W +L R+ F V+V W F FG ++RI
Sbjct: 383 AWFAWMLVHLIRLAGRYADFTVSVKWIWNFFFGTRLARI 421
>gi|406603334|emb|CCH45126.1| NADH dehydrogenase [Wickerhamomyces ciferrii]
Length = 543
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 154/295 (52%), Gaps = 31/295 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E+ RLL VVVGGGPTGVE +GEL D+I +D++ ++ D + + LIEA +L+ F
Sbjct: 252 DPERKRLLTLVVVGGGPTGVETAGELQDYIDQDLKTFMPNIVDEVQIVLIEALPVVLNMF 311
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLIL----NDG----TEVPYGLLVWSTGV 117
+ +L YA L ++ + L R V V+ + LI DG T++PYG+LVW+TG
Sbjct: 312 EKKLTSYAEKVLKETSIDLKTRTAVSKVEDEYLIAKTKNEDGSVEETKIPYGVLVWATGN 371
Query: 118 GPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
P L+ +L +P+ G ++E L V +FA+GD LP AQ
Sbjct: 372 KPRPLITNLFKKIPEQNHANRGLIVNENLLVEGTNSIFAIGD-------NAFAKLPPTAQ 424
Query: 174 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD---------PFVYRHLGSMATIGRYK 224
VA ++ +YL + ++I K G + E D PF Y HLG++A +G K
Sbjct: 425 VAHQEAEYLCKVFSKIAKTPGFHEKLSTTSEKVDLLFQEHGIKPFKYIHLGALAYLGAEK 484
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
A+ ++ S S G ++ VWR Y++ ++S R+RF V +W FGRD
Sbjct: 485 AIANITYGSRS-FYSGGGIFTFFVWRVLYVSMILSVRSRFKVIADWLKISFFGRD 538
>gi|15965832|ref|NP_386185.1| NADH dehydrogenase transmembrane protein [Sinorhizobium meliloti
1021]
gi|334316774|ref|YP_004549393.1| NADH dehydrogenase (ubiquinone) [Sinorhizobium meliloti AK83]
gi|384529964|ref|YP_005714052.1| NADH dehydrogenase (ubiquinone) [Sinorhizobium meliloti BL225C]
gi|384535696|ref|YP_005719781.1| putative NADH dehydrogenase transmembrane protein [Sinorhizobium
meliloti SM11]
gi|407721109|ref|YP_006840771.1| NADH dehydrogenase transmembrane protein [Sinorhizobium meliloti
Rm41]
gi|433613860|ref|YP_007190658.1| NADH dehydrogenase, FAD-containing subunit [Sinorhizobium meliloti
GR4]
gi|15075101|emb|CAC46658.1| Putative NADH dehydrogenase transmembrane protein [Sinorhizobium
meliloti 1021]
gi|333812140|gb|AEG04809.1| NADH dehydrogenase (ubiquinone) [Sinorhizobium meliloti BL225C]
gi|334095768|gb|AEG53779.1| NADH dehydrogenase (ubiquinone) [Sinorhizobium meliloti AK83]
gi|336032588|gb|AEH78520.1| putative NADH dehydrogenase transmembrane protein [Sinorhizobium
meliloti SM11]
gi|407319341|emb|CCM67945.1| NADH dehydrogenase transmembrane protein [Sinorhizobium meliloti
Rm41]
gi|429552050|gb|AGA07059.1| NADH dehydrogenase, FAD-containing subunit [Sinorhizobium meliloti
GR4]
Length = 422
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 147/282 (52%), Gaps = 24/282 (8%)
Query: 8 EEEKSR---LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EI 62
EE+ +R LL ++G GPTGVE +G +++ R + + + + V L+EA I
Sbjct: 148 EEDTARRDALLTFTIIGAGPTGVELAGIIAEMAHRTLPGEFRRIDTRLARVVLVEAGPRI 207
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPST 121
L +F + L YA+ +L K GV ++ G V D + + + + + VP LVW+ GV S
Sbjct: 208 LPAFSEELSAYASRELEKLGVEVLTGTPVTDCTDEGVTIGE-SFVPSRTLVWAAGVQASP 266
Query: 122 LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 181
+ + GR+ + L P D+F +GD + ++ GK V P +A A++QG Y
Sbjct: 267 AARWVGADADRAGRVKVGPDLTAPHHPDIFVIGDTASVIQEDGKPV-PGIAPAAKQQGAY 325
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
+ ++ G+ G A PF YRH GS+ATIG+ A++D + K L
Sbjct: 326 VAQVIR--GRLTGSPAPG--------PFRYRHQGSLATIGKRAAIIDFGRIK------LR 369
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G L+W +W A++ ++ R+RF VA +W T++ G+ +R+
Sbjct: 370 GSLAWWIWGIAHIYFLIGTRSRFAVAWSWLWTYLSGQHSARL 411
>gi|258545964|ref|ZP_05706198.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Cardiobacterium hominis ATCC 15826]
gi|258518769|gb|EEV87628.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Cardiobacterium hominis ATCC 15826]
Length = 418
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 137/280 (48%), Gaps = 27/280 (9%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQR-YSHVK-DYIHVTLIEANEIL-SS 65
E ++ LH VV GGG +GVE +G L++ + RD+ + Y ++ ++ +TL+ A+ +L
Sbjct: 149 EARAPYLHLVVAGGGASGVELTGILAE-MRRDIFDKDYPELEGEHGQLTLVTADPVLLPP 207
Query: 66 FDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
+ + Y L K GV ++ V D Q + L GT + L+W+ GV L
Sbjct: 208 MREVSQRYTAAALQKLGVDIIYNDPVTAYDGQTITLKSGTTIAAKSLIWTAGVTAVKLAG 267
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYL-ESTGKTVLPALAQVAERQGKYLF 183
D G R+ +D LRV + DV+A+GDC+ +S P L QVA+ QGKYL
Sbjct: 268 IADSSYGRGNRLRVDRQLRVIGLDDVYAIGDCAIVEGDSAYPNGHPQLGQVAKAQGKYLG 327
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
L R KA FVY+H G MA IGR A+ D+ G SL G
Sbjct: 328 KALGRSDKA----------------FVYKHRGDMAMIGRLSAVADM-----PGGRSLQGM 366
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
++W +W ++ +V+++NR NW+ F+ R+
Sbjct: 367 IAWFIWVVVHILALVTFKNRIAATYNWSIAFLTKNQAMRM 406
>gi|323332094|gb|EGA73505.1| Nde1p [Saccharomyces cerevisiae AWRI796]
Length = 424
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 161/303 (53%), Gaps = 40/303 (13%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E++RLL VVVGGGPTGVEF+ EL D++ +D+R+ + I VTL+EA IL+ F
Sbjct: 132 DPERARLLSFVVVGGGPTGVEFAAELRDYVDQDLRKWMPELSKEIKVTLVEALPNILNMF 191
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG----TEVPYGLLVWSTGVGPST 121
D L YA + + L ++ +VK VD+ + G +PYG+LVW+TG P
Sbjct: 192 DKYLVDYAQDLFKEEKIDLRLKTMVKKVDATTITAKTGDGDIENIPYGVLVWATGNAPRE 251
Query: 122 LVKSL--DLPKSPGGR-IGIDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPAL---AQV 174
+ K+L L + R + ID L++ + +FA+GDC T P L AQV
Sbjct: 252 VSKNLMTKLEEQDSRRGLLIDNKLQLLGAKGSIFAIGDC---------TFHPGLFPTAQV 302
Query: 175 AERQGKYL---FSLLNRIGKAGGGRANSAKDMELG-------------DPFVYRHLGSMA 218
A ++G+YL F +I + ++ D E+ + F Y H G++A
Sbjct: 303 AHQEGEYLAQYFKKAYKIDQLNWKMTHAKDDSEVARLKNQIVKTQSQIEDFKYNHKGALA 362
Query: 219 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
IG KA+ DL E+K LAG ++L W+SAYL +S+RNR VA++WA + GR
Sbjct: 363 YIGSDKAIADLAVG-EAK-YRLAGSFTFLFWKSAYLAMCLSFRNRVLVAMDWAKVYFLGR 420
Query: 279 DIS 281
D S
Sbjct: 421 DSS 423
>gi|6323794|ref|NP_013865.1| NADH-ubiquinone reductase (H(+)-translocating) NDE1 [Saccharomyces
cerevisiae S288c]
gi|732163|sp|P40215.1|NDH1_YEAST RecName: Full=External NADH-ubiquinone oxidoreductase 1,
mitochondrial; AltName: Full=External NADH dehydrogenase
1; Flags: Precursor
gi|606443|emb|CAA87359.1| similar to rotenone-insensitive NADH-ubiquinone [Saccharomyces
cerevisiae]
gi|51013021|gb|AAT92804.1| YMR145C [Saccharomyces cerevisiae]
gi|151945846|gb|EDN64078.1| NADH:ubiquinone oxidoreductase [Saccharomyces cerevisiae YJM789]
gi|190408371|gb|EDV11636.1| NADH:ubiquinone oxidoreductase [Saccharomyces cerevisiae RM11-1a]
gi|207342266|gb|EDZ70079.1| YMR145Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259148723|emb|CAY81968.1| Nde1p [Saccharomyces cerevisiae EC1118]
gi|285814146|tpg|DAA10041.1| TPA: NADH-ubiquinone reductase (H(+)-translocating) NDE1
[Saccharomyces cerevisiae S288c]
gi|349580429|dbj|GAA25589.1| K7_Nde1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297307|gb|EIW08407.1| Nde1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 560
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 161/303 (53%), Gaps = 40/303 (13%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E++RLL VVVGGGPTGVEF+ EL D++ +D+R+ + I VTL+EA IL+ F
Sbjct: 268 DPERARLLSFVVVGGGPTGVEFAAELRDYVDQDLRKWMPELSKEIKVTLVEALPNILNMF 327
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG----TEVPYGLLVWSTGVGPST 121
D L YA + + L ++ +VK VD+ + G +PYG+LVW+TG P
Sbjct: 328 DKYLVDYAQDLFKEEKIDLRLKTMVKKVDATTITAKTGDGDIENIPYGVLVWATGNAPRE 387
Query: 122 LVKSL--DLPKSPGGR-IGIDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPAL---AQV 174
+ K+L L + R + ID L++ + +FA+GDC T P L AQV
Sbjct: 388 VSKNLMTKLEEQDSRRGLLIDNKLQLLGAKGSIFAIGDC---------TFHPGLFPTAQV 438
Query: 175 AERQGKYL---FSLLNRIGKAGGGRANSAKDMELG-------------DPFVYRHLGSMA 218
A ++G+YL F +I + ++ D E+ + F Y H G++A
Sbjct: 439 AHQEGEYLAQYFKKAYKIDQLNWKMTHAKDDSEVARLKNQIVKTQSQIEDFKYNHKGALA 498
Query: 219 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
IG KA+ DL E+K LAG ++L W+SAYL +S+RNR VA++WA + GR
Sbjct: 499 YIGSDKAIADLAVG-EAK-YRLAGSFTFLFWKSAYLAMCLSFRNRVLVAMDWAKVYFLGR 556
Query: 279 DIS 281
D S
Sbjct: 557 DSS 559
>gi|256272015|gb|EEU07031.1| Nde1p [Saccharomyces cerevisiae JAY291]
Length = 560
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 161/303 (53%), Gaps = 40/303 (13%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E++RLL VVVGGGPTGVEF+ EL D++ +D+R+ + I VTL+EA IL+ F
Sbjct: 268 DPERARLLSFVVVGGGPTGVEFAAELRDYVDQDLRKWMPELSKEIKVTLVEALPNILNMF 327
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG----TEVPYGLLVWSTGVGPST 121
D L YA + + L ++ +VK VD+ + G +PYG+LVW+TG P
Sbjct: 328 DKYLVDYAQDLFKEEKIDLRLKTMVKKVDATTITAKTGDGDIENIPYGVLVWATGNAPRE 387
Query: 122 LVKSL--DLPKSPGGR-IGIDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPAL---AQV 174
+ K+L L + R + ID L++ + +FA+GDC T P L AQV
Sbjct: 388 VSKNLMTKLEEQDSRRGLLIDNKLQLLGAKGSIFAIGDC---------TFHPGLFPTAQV 438
Query: 175 AERQGKYL---FSLLNRIGKAGGGRANSAKDMELG-------------DPFVYRHLGSMA 218
A ++G+YL F +I + ++ D E+ + F Y H G++A
Sbjct: 439 AHQEGEYLAQYFKKAYKIDQLNWKMTHAKDDSEVARLKNQIVKTQSQIEDFKYNHKGALA 498
Query: 219 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
IG KA+ DL E+K LAG ++L W+SAYL +S+RNR VA++WA + GR
Sbjct: 499 YIGSDKAIADLAVG-EAK-YRLAGSFTFLFWKSAYLAMCLSFRNRVLVAMDWAKVYFLGR 556
Query: 279 DIS 281
D S
Sbjct: 557 DSS 559
>gi|414880221|tpg|DAA57352.1| TPA: hypothetical protein ZEAMMB73_528090 [Zea mays]
Length = 578
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 108/185 (58%), Gaps = 12/185 (6%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L +SEEE+ + LH VV+GGGPTGVEF+ EL DF+ D+ + Y VK Y+++++IEA
Sbjct: 209 LPNLSEEERKKNLHFVVIGGGPTGVEFAAELHDFVNADLAKLYPDVKKYVNISVIEAGGH 268
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDGT---EVPYGLLVWSTG 116
IL+ FD R+ +A + + G+ L +VK D + N T VPYG+ VWSTG
Sbjct: 269 ILTMFDKRITEFAEEKFKRDGIDLKTNFKVVKVSDKDITMTNPATGEVAVPYGMAVWSTG 328
Query: 117 VGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+G ++ LD K G + DEWLRV +DV+A+GDC+ + + ++
Sbjct: 329 IGTRPII--LDFMKQVGQENRRVLATDEWLRVQGCEDVYALGDCATIAQRKVMEDVASIF 386
Query: 173 QVAER 177
+VA++
Sbjct: 387 RVADK 391
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 56/122 (45%), Gaps = 11/122 (9%)
Query: 167 VLPALAQVAERQGKYLFSLLNRIGKA-----GGGRANSAKDMELGDPFVYRHLGSMATIG 221
+LPA AQVA ++G YL NR+ G R A PF YRHLG A +G
Sbjct: 463 MLPATAQVAAQEGSYLADCFNRMKTCEQYPEGPIRIRGAGRHRF-KPFRYRHLGQFAPLG 521
Query: 222 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
+ L + G S WL W S Y ++ SWR R V +W F+FGRD S
Sbjct: 522 GEQTAYQLPGDWVHVGHST----QWL-WYSVYASKQFSWRTRMLVISDWGRRFIFGRDSS 576
Query: 282 RI 283
I
Sbjct: 577 SI 578
>gi|392962759|ref|ZP_10328188.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans DSM
17108]
gi|421053177|ref|ZP_15516159.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans B4]
gi|421062984|ref|ZP_15525020.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans B3]
gi|421073837|ref|ZP_15534886.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Pelosinus fermentans A11]
gi|392437532|gb|EIW15399.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans B3]
gi|392442218|gb|EIW19808.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans B4]
gi|392443826|gb|EIW21335.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Pelosinus fermentans A11]
gi|392452000|gb|EIW28969.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans DSM
17108]
Length = 418
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 148/278 (53%), Gaps = 22/278 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSF 66
+++ LL V+VGGGPTGVE +G LS+ I + + Y H+ + + L+EA +++L++
Sbjct: 156 DKRRALLTFVIVGGGPTGVESAGALSELIYHVMVREYHHLNFKEVRIMLVEASDKLLATM 215
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
+ LR L + V + + V D D +K+ L G +P ++W+ GV + L+ +
Sbjct: 216 PEELREVTVETLIRKHVEVRMCVQVTDYDGEKMSLKGGEVIPTHTVIWAAGVKANGLMDT 275
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
L++ ++ R ++++L++P+ +VF +GD + Y++ G+ LP +A VA +Q
Sbjct: 276 LEVEQASMRRAVVNDFLQLPNRPEVFVIGDAAHYVQ--GERPLPMIAPVAIQQADI---- 329
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
N + EL FVY+ +G+MATIGR A+V + K GF++
Sbjct: 330 ------TAKNIRNLIRGREL-KKFVYKDVGNMATIGRNAAVVHMGAFKTH------GFIA 376
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W +W ++ R++ +RNR V V W ++ + RI
Sbjct: 377 WSIWSLVHILRLIDFRNRAVVFVKWMWDYLVYERVVRI 414
>gi|226530785|ref|NP_001142169.1| uncharacterized protein LOC100274336 [Zea mays]
gi|194707450|gb|ACF87809.1| unknown [Zea mays]
Length = 578
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 108/185 (58%), Gaps = 12/185 (6%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L +SEEE+ + LH VV+GGGPTGVEF+ EL DF+ D+ + Y VK Y+++++IEA
Sbjct: 209 LPNLSEEERKKNLHFVVIGGGPTGVEFAAELHDFVNADLAKLYPDVKKYVNISVIEAGGH 268
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDGT---EVPYGLLVWSTG 116
IL+ FD R+ +A + + G+ L +VK D + N T VPYG+ VWSTG
Sbjct: 269 ILTMFDKRITEFAEEKFKRDGIDLKTNFKVVKVSDKDITMTNPATGEVAVPYGMAVWSTG 328
Query: 117 VGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+G ++ LD K G + DEWLRV +DV+A+GDC+ + + ++
Sbjct: 329 IGTRPII--LDFMKQVGQENRRVLATDEWLRVQGCEDVYALGDCATIAQRKVMEDVASIF 386
Query: 173 QVAER 177
+VA++
Sbjct: 387 RVADK 391
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 56/122 (45%), Gaps = 11/122 (9%)
Query: 167 VLPALAQVAERQGKYLFSLLNRIGKA-----GGGRANSAKDMELGDPFVYRHLGSMATIG 221
+LPA AQVA ++G YL NR+ G R A PF YRHLG A +G
Sbjct: 463 MLPATAQVAAQEGSYLADCFNRMKTCEQYPEGPIRIRGAGRHRF-KPFRYRHLGQFAPLG 521
Query: 222 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
+ L + G S WL W S Y ++ SWR R V +W F+FGRD S
Sbjct: 522 GEQTAYQLPGDWVHVGHST----QWL-WYSVYASKQFSWRTRMLVISDWGRRFIFGRDSS 576
Query: 282 RI 283
I
Sbjct: 577 SI 578
>gi|297803260|ref|XP_002869514.1| hypothetical protein ARALYDRAFT_913700 [Arabidopsis lyrata subsp.
lyrata]
gi|297315350|gb|EFH45773.1| hypothetical protein ARALYDRAFT_913700 [Arabidopsis lyrata subsp.
lyrata]
Length = 573
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 105/165 (63%), Gaps = 9/165 (5%)
Query: 2 FLAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-N 60
L G++EE++ R LH V+VGGGPTGVEF+ EL DFI+ D+ + Y VK+ + +TLI++ +
Sbjct: 204 ILPGLTEEQRRRKLHFVIVGGGPTGVEFAAELHDFIIEDITKIYPSVKELVKITLIQSGD 263
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI----VKDVDSQKLILNDGT--EVPYGLLVWS 114
IL+SFD+R+ +A + ++ G+ + G+ V D D + + G +P+GL++WS
Sbjct: 264 HILNSFDERISSFAEQKFTRDGIDVQTGVRVMSVTDKDISVKVKSSGEVISIPHGLILWS 323
Query: 115 TGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 157
TGVG ++ GGR + +EWL+V ++V+AVGDC+
Sbjct: 324 TGVGTRPVISDFMEQVGQGGRRALATNEWLQVTGCENVYAVGDCA 368
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 66/129 (51%), Gaps = 12/129 (9%)
Query: 160 LESTGKTVLPALAQVAERQGKYLFSLLNRIGKA-----GGGRANSAKDMELGDPFVYRHL 214
++S KT LPA AQVA +QG YL NR+ + G R + + PF Y+H
Sbjct: 452 VDSQMKT-LPATAQVAAQQGAYLAKCFNRMEQCKEQPEGPKRFRTGGHHQF-RPFQYKHF 509
Query: 215 GSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
G A +G +A +L + S G S WL W S Y ++ VSWR R V +W +
Sbjct: 510 GQFAPLGGDQAAAELPGDWVSAGRST----QWL-WYSVYASKQVSWRTRALVVSDWTRRY 564
Query: 275 VFGRDISRI 283
+FGRD SRI
Sbjct: 565 IFGRDSSRI 573
>gi|421066649|ref|ZP_15528225.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein, partial [Pelosinus fermentans
A12]
gi|392454100|gb|EIW30946.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein, partial [Pelosinus fermentans
A12]
Length = 362
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 148/278 (53%), Gaps = 22/278 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSF 66
+++ LL V+VGGGPTGVE +G LS+ I + + Y H+ + + L+EA +++L++
Sbjct: 100 DKRRALLTFVIVGGGPTGVESAGALSELIYHVMVREYHHLNFKEVRIMLVEASDKLLATM 159
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
+ LR L + V + + V D D +K+ L G +P ++W+ GV + L+ +
Sbjct: 160 PEELREVTVETLIRKHVEVRMCVQVTDYDGEKMSLKGGEVIPTHTVIWAAGVKANGLMDT 219
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
L++ ++ R ++++L++P+ +VF +GD + Y++ G+ LP +A VA +Q
Sbjct: 220 LEVEQASMRRAVVNDFLQLPNRPEVFVIGDAAHYVQ--GERPLPMIAPVAIQQADI---- 273
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
N + EL FVY+ +G+MATIGR A+V + K GF++
Sbjct: 274 ------TAKNIRNLIRGREL-KKFVYKDVGNMATIGRNAAVVHMGAFKTH------GFIA 320
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W +W ++ R++ +RNR V V W ++ + RI
Sbjct: 321 WSIWSLVHILRLIDFRNRAVVFVKWMWDYLVYERVVRI 358
>gi|367050430|ref|XP_003655594.1| hypothetical protein THITE_2119447 [Thielavia terrestris NRRL 8126]
gi|347002858|gb|AEO69258.1| hypothetical protein THITE_2119447 [Thielavia terrestris NRRL 8126]
Length = 537
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 153/340 (45%), Gaps = 85/340 (25%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
+S+ +K +LLH +VGGGPTG+EF+ EL D I D+ Y + + +T+ + A ++L
Sbjct: 221 LSDADKRQLLHFAIVGGGPTGIEFAAELHDLIRDDLAPLYPDLMPLVSITVYDVAPKVLP 280
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGT------------------EV 106
FD L YA ++ +R + Q+L L DG EV
Sbjct: 281 MFDQALAQYAMDHFARQNIR----VKTQHHLQRLRLADGEFGRRHGALKIKIKECGDEEV 336
Query: 107 PYGLLVWSTGVGPSTLVKSLD-------------------------LPKSPGGRIGIDEW 141
G++VWSTG+ + L+ L L S G I D +
Sbjct: 337 GAGIVVWSTGIMANPLIAKLAAKELTSAGRNPPPNPSQPAPAALRLLRDSRTGGIVTDAY 396
Query: 142 LRV-----------------PSV-QDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
LR P + +DV+ +GDC+ +E+ + LP AQVA +Q +L
Sbjct: 397 LRARLSGTTAEGGSGDRAASPGILEDVYVIGDCA-VMEN--EPTLPKTAQVASQQATHLA 453
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
LN PF +R+ G++ +G +KA+ +S+ L G+
Sbjct: 454 RRLN----------AGGAAGVAAKPFRFRNWGTLTYLGSWKAI------HQSRADELRGW 497
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
++W+VWR AYLT+ +S RN+ V + W +++FGR ISR
Sbjct: 498 VAWVVWRGAYLTKSMSVRNKILVPIYWLVSWIFGRGISRF 537
>gi|323303514|gb|EGA57307.1| Nde1p [Saccharomyces cerevisiae FostersB]
gi|323336105|gb|EGA77377.1| Nde1p [Saccharomyces cerevisiae Vin13]
gi|323347214|gb|EGA81489.1| Nde1p [Saccharomyces cerevisiae Lalvin QA23]
gi|365763863|gb|EHN05389.1| Nde1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 554
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 161/303 (53%), Gaps = 40/303 (13%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E++RLL VVVGGGPTGVEF+ EL D++ +D+R+ + I VTL+EA IL+ F
Sbjct: 262 DPERARLLSFVVVGGGPTGVEFAAELRDYVDQDLRKWMPELSKEIKVTLVEALPNILNMF 321
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG----TEVPYGLLVWSTGVGPST 121
D L YA + + L ++ +VK VD+ + G +PYG+LVW+TG P
Sbjct: 322 DKYLVDYAQDLFKEEKIDLRLKTMVKKVDATTITAKTGDGDIENIPYGVLVWATGNAPRE 381
Query: 122 LVKSL--DLPKSPGGR-IGIDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPAL---AQV 174
+ K+L L + R + ID L++ + +FA+GDC T P L AQV
Sbjct: 382 VSKNLMTKLEEQDSRRGLLIDNKLQLLGAKGSIFAIGDC---------TFHPGLFPTAQV 432
Query: 175 AERQGKYL---FSLLNRIGKAGGGRANSAKDMELG-------------DPFVYRHLGSMA 218
A ++G+YL F +I + ++ D E+ + F Y H G++A
Sbjct: 433 AHQEGEYLAQYFKKAYKIDQLNWKMTHAKDDSEVARLKNQIVKTQSQIEDFKYNHKGALA 492
Query: 219 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
IG KA+ DL E+K LAG ++L W+SAYL +S+RNR VA++WA + GR
Sbjct: 493 YIGSDKAIADLAVG-EAK-YRLAGSFTFLFWKSAYLAMCLSFRNRVLVAMDWAKVYFLGR 550
Query: 279 DIS 281
D S
Sbjct: 551 DSS 553
>gi|407465783|ref|YP_006776665.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Candidatus Nitrosopumilus sp. AR2]
gi|407048971|gb|AFS83723.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Candidatus Nitrosopumilus sp. AR2]
Length = 452
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 151/293 (51%), Gaps = 43/293 (14%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSSFDD 68
+ L+ VVVGGG G+E +GEL D ++ D R+ Y + K+ + V ++EA IL F+
Sbjct: 162 RKSFLNFVVVGGGFAGIETAGELMDLLL-DARKHYPTIHKEDLKVIVLEALGMILPGFNQ 220
Query: 69 RLRHYATTQLSKSGV--RLVRGIV----KDVDSQKLILN-----DGTEVP---YGLLVWS 114
+L +A ++ + G+ RL + +V ++ L N D +E+ L+W+
Sbjct: 221 KLADFARDKMIERGIDIRLKTAVTSFDGNEVTTKSLDENLKDSIDTSEIDSIVTKTLIWT 280
Query: 115 TGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
GV P +K + K+ G++ ++++L V VFA+GDC+ +L+ + LP AQ+
Sbjct: 281 AGVTPVNTIKR-SMFKTEKGKVIVNDYLEVLEFPGVFAIGDCALHLDPKTQRPLPPTAQI 339
Query: 175 AERQGKY----LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLR 230
AE Q K L SL+ NS K+ FVY G MA IG+ +
Sbjct: 340 AEAQAKIAAKNLISLIR----------NSKKE-----KFVYHSKGQMAIIGKRSGIATFL 384
Query: 231 QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G++++GF +WL+WR+ YL+++ ++ + V ++W F RDISR+
Sbjct: 385 ------GMNISGFWAWLIWRNVYLSKITTFDKKIRVFLDWTIDLFFDRDISRL 431
>gi|398338347|ref|ZP_10523050.1| NADH dehydrogenase [Leptospira kirschneri serovar Bim str. 1051]
gi|418679636|ref|ZP_13240897.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|418740300|ref|ZP_13296678.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
gi|400320078|gb|EJO67951.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|410752304|gb|EKR09279.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
Length = 422
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 150/284 (52%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN- 60
L+G E KS LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA+
Sbjct: 149 LSGDPEVVKS-LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHKIDPALSKITLIEASP 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L +FD L + +L + GV ++ G V D++ Q + L +G +P ++W+ GV
Sbjct: 208 RLLMTFDPSLGEFTKKRLERRGVEVLTGTRVIDINEQGVQL-EGKMIPTQTVIWAAGVQA 266
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+++ +L GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG
Sbjct: 267 NSIASTLGTTLDRGGRVIVDEFCNIEGHSEVFVIGDIASYSKGLERP-LPGVSPVAMQQG 325
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+Y+ SL+ N K+ + PF Y GSMATIGR A+ + L
Sbjct: 326 RYVASLIQ----------NDLKNKKR-KPFHYIDKGSMATIGRTDAVAQVGI------LK 368
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G WL W +L V ++N+ + + W +++ R +R+
Sbjct: 369 MKGLFGWLAWLFVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|421088152|ref|ZP_15548981.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
str. 200802841]
gi|410003408|gb|EKO53853.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
str. 200802841]
Length = 422
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 150/284 (52%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN- 60
L+G E KS LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA+
Sbjct: 149 LSGDPEVVKS-LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHKIDPALSKITLIEASP 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L +FD L + +L + GV ++ G V D++ Q + L +G +P ++W+ GV
Sbjct: 208 RLLMTFDPSLGEFTKKRLERRGVEVLTGTRVIDINEQGVQL-EGKMIPTQTVIWAAGVQA 266
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+++ +L GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG
Sbjct: 267 NSIASTLGTTLDRGGRVIVDEFCNIEGHSEVFVIGDIASYSKGLERP-LPGVSPVAMQQG 325
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+Y+ SL+ N K+ + PF Y GSMATIGR A+ + L
Sbjct: 326 RYVASLIQ----------NDLKNKKR-KPFHYIDKGSMATIGRTDAVAQVGI------LK 368
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G WL W +L V ++N+ + + W +++ R +R+
Sbjct: 369 MKGLFGWLAWLFVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|383762772|ref|YP_005441754.1| putative oxidoreductase [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381383040|dbj|BAL99856.1| putative oxidoreductase [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 412
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 138/278 (49%), Gaps = 22/278 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANE-ILSSF 66
E + ++L V+VGGGPTGVEF+ L++ I +R+ + + V L+EA E +L F
Sbjct: 151 ERRQQILTFVIVGGGPTGVEFASALAELINGPLRRDFPFLSSSPGRVVLVEAMEALLPGF 210
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
L+ YA +L + GV ++ G V +D + L D + +VW+ GV V
Sbjct: 211 HPHLQDYAAKRLRRIGVEVLLGAPVTRIDESTVTLKDEMRITAETIVWTAGVQGILPVAR 270
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
P GR+ + L+ P +V+ VGD + YLE LP +A VA +QGK+ +
Sbjct: 271 WGFPVVKSGRVAVLPTLQTPDHPEVYVVGDLA-YLEQKSAP-LPMVAPVAIQQGKW--AA 326
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
N + + G + PF YR G+M TIGR A L L GF +
Sbjct: 327 QNILRQVHGQQPL---------PFRYRDRGAMVTIGRNAAAAQL------GSLKFTGFPA 371
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W++W + +L +V +RNR V +NWA + F I+R+
Sbjct: 372 WVLWLTVHLFNLVGFRNRLVVMLNWAWDYFFFERIARL 409
>gi|338975728|ref|ZP_08631077.1| NADH dehydrogenase [Bradyrhizobiaceae bacterium SG-6C]
gi|338231037|gb|EGP06178.1| NADH dehydrogenase [Bradyrhizobiaceae bacterium SG-6C]
Length = 426
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 147/279 (52%), Gaps = 19/279 (6%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILS 64
SE E++RLL V++G GPTGVE +G +++ +R + + V LIEA ILS
Sbjct: 152 SEAERARLLTFVIIGAGPTGVELAGTIAELAHDTLRGEFRNFDTRKARVILIEAGPRILS 211
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
F + L YA L++ GV + G S++ + G +P ++W+ GV S +
Sbjct: 212 GFTEDLSDYAQRALTRLGVEIRLGHAVSRCSEEGVELGGEFLPASTIIWAAGVAASPAAE 271
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
L P GR+ + L VP D+F +GD + ++EST ++P +A A+++G+Y
Sbjct: 272 WLHAPADRAGRVMVMPDLTVPGHPDIFVIGDAA-HVESTDGKLVPGVAPAAKQEGQY--- 327
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
+ +A R K G+ FVY++ G++ATIG+ A+VD K L G L
Sbjct: 328 ----VARAIQARLRGEK---FGNNFVYKNAGNLATIGKRAAIVDFGWIK------LKGRL 374
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W +W A++ ++ RNR VA+NW +V G+ +R+
Sbjct: 375 AWWIWGIAHIFFLIGLRNRLAVAMNWLWIYVRGQRSARL 413
>gi|156034669|ref|XP_001585753.1| hypothetical protein SS1G_13269 [Sclerotinia sclerotiorum 1980]
gi|154698673|gb|EDN98411.1| hypothetical protein SS1G_13269 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 514
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 153/318 (48%), Gaps = 49/318 (15%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L ISE+EK +LH +VGGGPTG+E + E+ + I + Y +K Y +++ + A+
Sbjct: 207 LPTISEQEKKNILHFAIVGGGPTGIELAAEIDELIQEHLGAVYPRLKGYCTISIYDVADR 266
Query: 62 ILSSFDDRLRHYATTQLSKSG-VRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L F ++L YA + G V + G ++++ +++ + EVP+G++VW+ G
Sbjct: 267 LLGQFGEKLSEYAMEKFENRGDVHVKTGKHIQEIKRNSMLIKEEGEVPFGVVVWAVGNTA 326
Query: 120 STLVKSLDLPKSPG-GRIGIDEWLRVPS-----------------------VQDVFAVGD 155
LV+ L+ KS G RI D+WLRV +++V+A+GD
Sbjct: 327 GKLVEGLECRKSEGLQRILTDKWLRVLKTADFDAVKKQEQEQEQGNQTGDIIKNVYALGD 386
Query: 156 CSGYLESTGKTVLPALAQVAERQGKYLF-SLLNRIGKAGGGRANSAK------DMELGDP 208
+ L + LP A+VA ++ K+L LL+ + ++SA + + P
Sbjct: 387 AADILNNE----LPTTAEVAVQKAKWLTRHLLDAALNSPLANSHSANETSETSETSISTP 442
Query: 209 ----FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRF 264
F Y+ +A +GR ++ Q K G +WL WRS + WR R
Sbjct: 443 KTPSFQYKQKDLIAYLGRGDGVI---QGK----TEWTGVSAWLAWRSGSIAWTRGWRRRV 495
Query: 265 YVAVNWATTFVFGRDISR 282
V VNW FV GR+++R
Sbjct: 496 MVVVNWVANFVDGREVAR 513
>gi|347837919|emb|CCD52491.1| similar to pyridine nucleotide-disulphide oxidoreductase
[Botryotinia fuckeliana]
Length = 481
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 148/297 (49%), Gaps = 39/297 (13%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L ISE+EK +LH +VGGGPTG+E + E+ + I + Y +K +++ + A+
Sbjct: 206 LPTISEQEKRDMLHFAIVGGGPTGIELAAEIDELIQEHLGAVYPRLKGLCTISIYDVADR 265
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVR--GIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L FD++L YA + G V+ ++++ + + + EVP+G++VW+ G
Sbjct: 266 LLGQFDEKLSEYAMEKFQNRGCVKVKTGKHIEEIKRHSMTIKEEGEVPFGVVVWAVGNTA 325
Query: 120 STLVKSLDLPKSPG-GRIGIDEWLRVPS-------------VQDVFAVGDCSGYLESTGK 165
LV+ L KS G RI D+WLRV + + +V+A+GD + L K
Sbjct: 326 GKLVEDLQCRKSKGLQRILTDKWLRVLAPDSDGVEGAGADIIDNVYALGDAADIL----K 381
Query: 166 TVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKA 225
LP A+VA ++ K+L L +NS +D LG PF Y +A IGR
Sbjct: 382 NELPTTAEVAVQKAKWLTQHL---------LSNSEQD--LGKPFTYEQKDLVAYIGRGDG 430
Query: 226 LVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
++ +++ G +WL WRS + WR R V VNW +V GR+I+R
Sbjct: 431 VIQGKKD-------WTGASAWLAWRSGSIAWTRGWRRRVMVVVNWVANWVDGREIAR 480
>gi|421592976|ref|ZP_16037608.1| NADH dehydrogenase [Rhizobium sp. Pop5]
gi|403701206|gb|EJZ18118.1| NADH dehydrogenase [Rhizobium sp. Pop5]
Length = 421
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 141/275 (51%), Gaps = 19/275 (6%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDD 68
+ LL +VG GPTGVE +G +++ + + + ++ V L+EA +L +F +
Sbjct: 153 RDALLTFTIVGAGPTGVELAGIIAELAHFTLPKEFRNIDTRKTRVVLVEAGPRVLPTFAE 212
Query: 69 RLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 128
L YA L K GV ++ G S + T VP +VW+ GV S + L+
Sbjct: 213 ELSAYAQKALEKLGVEVLLGKPVTACSADGVQIGETIVPSRTIVWAAGVTASPAARWLEA 272
Query: 129 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 188
P GR+ +++ L P + D+F +GD + L GK V P +A A++QG Y+ ++
Sbjct: 273 PADRAGRVVVEKDLSAPGLPDIFVIGDTASVLRENGKPV-PGIAPAAKQQGGYVAKVIR- 330
Query: 189 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 248
+ G A + PF YRH GS+ATIG+ A++D + K L G+++W +
Sbjct: 331 -ARLSGKPAPA--------PFKYRHQGSLATIGKSAAIIDFGRIK------LKGWIAWWI 375
Query: 249 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 376 WGLAHIYFLIGTRSRFSVAWSWLWIYLSGQHSARL 410
>gi|413952244|gb|AFW84893.1| hypothetical protein ZEAMMB73_805701 [Zea mays]
Length = 578
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 12/185 (6%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L +SEEE+ + LH V++GGGPTGVEF+ EL DF+ D+ + Y VK ++++++IEA
Sbjct: 209 LPNLSEEERKKNLHFVIIGGGPTGVEFAAELHDFVNEDLAKLYPDVKKHVNISVIEAGGH 268
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDGT---EVPYGLLVWSTG 116
IL+ FD R+ +A + + G+ L +VK + L+ N T VPYG+ VWSTG
Sbjct: 269 ILTMFDKRITQFAEEKFKRDGIDLKTNFKVVKVSNKDILMTNPATGEVAVPYGMAVWSTG 328
Query: 117 VGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+G ++ +D K G + DEWLRV +DV+A+GDC+ + + A+
Sbjct: 329 IGTRPII--MDFMKQVGQENRRVLATDEWLRVQGCEDVYALGDCATIAQRKVMEDVAAIF 386
Query: 173 QVAER 177
+VA++
Sbjct: 387 RVADK 391
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 56/122 (45%), Gaps = 11/122 (9%)
Query: 167 VLPALAQVAERQGKYLFSLLNRIGKA-----GGGRANSAKDMELGDPFVYRHLGSMATIG 221
+LPA AQVA ++G YL NR+ G R A PF Y+HLG A +G
Sbjct: 463 MLPATAQVAAQEGSYLADCFNRMKMCEEYPEGPIRIRGAGRHRF-KPFRYKHLGQFAPLG 521
Query: 222 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
+ L + G S WL W S Y ++ SWR R V +W F+FGRD S
Sbjct: 522 GEQTAYQLPGDWVHVGHST----QWL-WYSVYASKQFSWRTRMLVVSDWGRRFIFGRDSS 576
Query: 282 RI 283
I
Sbjct: 577 SI 578
>gi|386772391|ref|ZP_10094769.1| NADH dehydrogenase, FAD-containing subunit [Brachybacterium
paraconglomeratum LC44]
Length = 479
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 145/275 (52%), Gaps = 30/275 (10%)
Query: 4 AGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIE-ANE 61
AG++ ++ LH +VGGGPTGVE +G L+DF M+++ Y + + +T+++ +E
Sbjct: 169 AGVTHDK----LHVCIVGGGPTGVEIAGALADFRMQELDILYPEMDPGTLQLTVLQRGDE 224
Query: 62 ILSSFDDRLRHYATTQLSKSGV--RLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L F D+ R YA +L GV RL G VK+V +IL+DG+ + + +W+ GV
Sbjct: 225 LLKEFSDKYRQYAADELRDRGVVLRLGHG-VKEVGYDHVILDDGSILESDITIWAAGVAI 283
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
V LP+ GRI +D+ L+V + V+A GD + E+ LP LAQ A + G
Sbjct: 284 PEAVSRWGLPQDSRGRIAVDDHLQVKGMPGVYAAGDVAAQDEA-----LPQLAQPAIQTG 338
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
++ I G+ F Y +LG+MATIGR+ A+ ++ GLS
Sbjct: 339 S---AVAKSIAADVKGKQRPT--------FTYTNLGTMATIGRHAAIAEI---PVLGGLS 384
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
G L W W ++T+++ RN+ VA+N + +
Sbjct: 385 --GSLGWAAWLGVHITKMLGHRNQRAVAMNLVSLY 417
>gi|336366067|gb|EGN94415.1| NDE2, mitochondrial external NADH dehydrogenase [Serpula lacrymans
var. lacrymans S7.3]
gi|336378739|gb|EGO19896.1| mitochondrial external NADH dehydrogenase, NDE1 [Serpula lacrymans
var. lacrymans S7.9]
Length = 561
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/313 (35%), Positives = 154/313 (49%), Gaps = 44/313 (14%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
G S++E RLLH VVVGGGPTGVE SGEL DF+ D++ Y + I +TL+EA
Sbjct: 259 FPGQSDQEIDRLLHMVVVGGGPTGVELSGELHDFLEDDLKSWYPELASRIRITLVEALPS 318
Query: 62 ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILN----DGTEVPYGLLVWSTG 116
+L F +L Y + +S + L + +VK+V + ++L EVP G++VW+ G
Sbjct: 319 VLPMFSKKLIDYTESTFKESKIDILTKTMVKEVKDKSVVLQMPDKSIAEVPCGMVVWAAG 378
Query: 117 VGPSTLVKSL--DLPKSPGGRIGI---DEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 171
+ + L LP+ + GI D + S +FAVGDC T + P
Sbjct: 379 NTGRQVTRDLMAKLPEEQTNKRGITVDDHLMMKGSNGSIFAVGDC------TASSYAPT- 431
Query: 172 AQVAERQGKYLFSLLNRIGKAGG---------GRANSAKDMELG-----------DPFVY 211
AQVA +QG YL + + K G K E PF Y
Sbjct: 432 AQVASQQGAYLARIFALVAKKDNLEAQLVKLEGTTEPEKQAEADRIRKQIDKIKLKPFHY 491
Query: 212 RHLGSMATIGRYKALVDLR--QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVN 269
H GS+A IG KA+ DL ++ + G G ++L WRSAYL+ + S RNR VA +
Sbjct: 492 SHQGSLAYIGSEKAVADLPIFGHEWASG----GVATYLFWRSAYLSTLFSLRNRTLVASD 547
Query: 270 WATTFVFGRDISR 282
W +FGRD+SR
Sbjct: 548 WLRVKLFGRDVSR 560
>gi|365759046|gb|EHN00860.1| Nde1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 560
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 161/303 (53%), Gaps = 40/303 (13%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E++RLL VVVGGGPTGVEF+ EL D++ +D+R+ + I VTL+EA IL+ F
Sbjct: 268 DPERARLLSFVVVGGGPTGVEFAAELRDYVDQDLRKWMPELSKEIKVTLVEALPNILNMF 327
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG----TEVPYGLLVWSTGVGPST 121
D L YA + + L ++ +VK VD+ + G +PYG+LVW+TG P
Sbjct: 328 DKYLVDYAQDLFKEEKIDLRLKTMVKKVDATTITAKTGDGDIESIPYGVLVWATGNAPRE 387
Query: 122 LVKSL--DLPKSPGGR-IGIDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPAL---AQV 174
+ ++L L + R + ID L++ + +FA+GDC T P L AQV
Sbjct: 388 VSRNLMSKLEEQDSRRGLLIDNKLQLLGAKGSIFAIGDC---------TFHPGLFPTAQV 438
Query: 175 AERQGKYL---FSLLNRIGKAGGGRANSAKDMELG-------------DPFVYRHLGSMA 218
A ++G+YL F RI + ++S D E + F Y H G++A
Sbjct: 439 AHQEGEYLAQHFKKAYRIDQLNWKMSSSKDDSETAKLNNQVAKVESQIEDFKYNHKGALA 498
Query: 219 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
IG KA+ D+ E+K LAG ++L W+SAYL +S+RNR VA++WA + GR
Sbjct: 499 YIGSDKAIADIAVG-EAK-YRLAGSFTFLFWKSAYLAMCLSFRNRVLVAMDWAKVYFLGR 556
Query: 279 DIS 281
D S
Sbjct: 557 DSS 559
>gi|154311138|ref|XP_001554899.1| hypothetical protein BC1G_06687 [Botryotinia fuckeliana B05.10]
Length = 481
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 149/297 (50%), Gaps = 39/297 (13%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L ISE+EK +LH +VGGGPTG+E + E+ + I + Y +K +++ + A+
Sbjct: 206 LPTISEQEKRDMLHFAIVGGGPTGIELAAEIDELIQEHLGAVYPRLKGLCTISIYDVADR 265
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVR--GIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L FD++L YA + G V+ ++++ + + + EVP+G++VW+ G
Sbjct: 266 LLGQFDEKLSQYAMEKFQNRGCVKVKTGKHIEEIKRHSMTIKEEGEVPFGVVVWAVGNTA 325
Query: 120 STLVKSLDLPKSPG-GRIGIDEWLRVPS-------------VQDVFAVGDCSGYLESTGK 165
LV+ L KS G RI D+WLRV + +++V+A+GD + L K
Sbjct: 326 GKLVEDLQCRKSKGLQRILTDKWLRVLAPDSDGVEGAGADIIENVYALGDAAEIL----K 381
Query: 166 TVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKA 225
LP A+VA ++ K+L L +NS +D LG PF Y +A IGR
Sbjct: 382 NELPTTAEVAVQKAKWLTQHL---------LSNSEQD--LGKPFTYEQKDLVAYIGRGDG 430
Query: 226 LVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
++ +++ G +WL WRS + WR + V VNW +V GR+I+R
Sbjct: 431 VIQGKKD-------WTGASAWLAWRSGSIAWTRGWRRKVMVVVNWVANWVDGREIAR 480
>gi|119186217|ref|XP_001243715.1| hypothetical protein CIMG_03156 [Coccidioides immitis RS]
Length = 680
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 158/340 (46%), Gaps = 80/340 (23%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
+ S E + LLH +VG GPTG E + L DF+ D+ Q Y +KD +TL + A +
Sbjct: 360 MPTTSFELRKNLLHFAIVGAGPTGTELAAALCDFLHDDMFQIYPTLKDSTRITLYDVAPK 419
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLV--------------RGIVKDVDSQ---KLILNDGT 104
+LS FD L YA T +S+ GV + + ++D + L +G
Sbjct: 420 VLSMFDKTLSDYAMTVMSREGVEVKTNHHIQELRWGEPHKDPAPEMDPKGCLTLKTKEGG 479
Query: 105 EVPYGLLVWSTG----------VGP-------STLVK----SLDLPKSPGGRIG------ 137
E G+ VW+TG +GP S LV+ S + PKS +I
Sbjct: 480 EEGVGMCVWATGNEMNKFVNDSLGPLEQFPTFSALVQPGHTSPNDPKSVAWKIKKAPKTG 539
Query: 138 ---IDEWLRV---------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
+D LRV +QDVFA+GD + LES PA AQ ++ +L
Sbjct: 540 ALLVDNHLRVQLESEDGRRAVMQDVFALGD-NCMLESDSP---PATAQATNQEACWLAKR 595
Query: 186 LNR--IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE-SKGLSLAG 242
LN+ IG+ G F + + G +A +G KAL+ + ++ KG+ G
Sbjct: 596 LNKGGIGQEPG--------------FSFNNFGMIAYLGSSKALMQIPSSEHLPKGIK--G 639
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
+WL+W+ AYLT +SWRNR + +W + + FGRDISR
Sbjct: 640 RTAWLIWKGAYLTMSLSWRNRLRILYSWMSNWAFGRDISR 679
>gi|21554177|gb|AAM63256.1| putative NADH dehydrogenase [Arabidopsis thaliana]
Length = 571
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 105/165 (63%), Gaps = 9/165 (5%)
Query: 2 FLAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-N 60
L G++EE++ R LH V+VGGGPTGVEF+ EL DFI+ D+ + Y VK+ + +TLI++ +
Sbjct: 202 ILPGLTEEQRRRKLHFVIVGGGPTGVEFAAELHDFIIEDITKIYPSVKELVKITLIQSGD 261
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI----VKDVDSQKLILNDG--TEVPYGLLVWS 114
IL++FD+R+ +A + ++ G+ + G+ V D D + + G +P+GL++WS
Sbjct: 262 HILNTFDERISSFAEQKFTRDGIDVQTGMRVMSVTDKDITVKVKSSGELVSIPHGLILWS 321
Query: 115 TGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 157
TGVG ++ GGR + +EWL+V ++V+AVGDC+
Sbjct: 322 TGVGTRPVISDFMEQVGQGGRRAVATNEWLQVTGCENVYAVGDCA 366
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 168 LPALAQVAERQGKYLFSLLNRIGKA-----GGGRANSAKDMELGDPFVYRHLGSMATIGR 222
LPA AQVA +QG YL NR+ + G R + + PF Y+H G A +G
Sbjct: 457 LPATAQVAAQQGAYLAKCFNRMEQCKELPEGPKRFRTGGHHQF-RPFQYKHFGQFAPLGG 515
Query: 223 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
+A +L + S G S WL W S Y ++ VSWR R V +W ++FGRD SR
Sbjct: 516 DQAAAELPGDWVSAGKSA----QWL-WYSIYASKQVSWRTRALVVSDWTRRYIFGRDSSR 570
Query: 283 I 283
I
Sbjct: 571 I 571
>gi|18417151|ref|NP_567801.1| NADH dehydrogenase [Arabidopsis thaliana]
gi|122237632|sp|Q1JPL4.1|NDB1_ARATH RecName: Full=NAD(P)H dehydrogenase B1, mitochondrial; Flags:
Precursor
gi|95147320|gb|ABF57295.1| At4g28220 [Arabidopsis thaliana]
gi|332660055|gb|AEE85455.1| NADH dehydrogenase [Arabidopsis thaliana]
Length = 571
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 105/165 (63%), Gaps = 9/165 (5%)
Query: 2 FLAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-N 60
L G++EE++ R LH V+VGGGPTGVEF+ EL DFI+ D+ + Y VK+ + +TLI++ +
Sbjct: 202 ILPGLTEEQRRRKLHFVIVGGGPTGVEFAAELHDFIIEDITKIYPSVKELVKITLIQSGD 261
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI----VKDVDSQKLILNDG--TEVPYGLLVWS 114
IL++FD+R+ +A + ++ G+ + G+ V D D + + G +P+GL++WS
Sbjct: 262 HILNTFDERISSFAEQKFTRDGIDVQTGMRVMSVTDKDITVKVKSSGELVSIPHGLILWS 321
Query: 115 TGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 157
TGVG ++ GGR + +EWL+V ++V+AVGDC+
Sbjct: 322 TGVGTRPVISDFMEQVGQGGRRAVATNEWLQVTGCENVYAVGDCA 366
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 168 LPALAQVAERQGKYLFSLLNRIGKA-----GGGRANSAKDMELGDPFVYRHLGSMATIGR 222
LPA AQVA +QG YL NR+ + G R + + PF Y+H G A +G
Sbjct: 457 LPATAQVAAQQGAYLAKCFNRMEQCKELPEGPKRFRTGGHHQF-RPFQYKHFGQFAPLGG 515
Query: 223 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
+A +L + S G S WL W S Y ++ VSWR R V +W ++FGRD SR
Sbjct: 516 DQAAAELPGDWVSAGKSA----QWL-WYSVYASKQVSWRTRALVVSDWTRRYIFGRDSSR 570
Query: 283 I 283
I
Sbjct: 571 I 571
>gi|392870423|gb|EAS32225.2| pyridine nucleotide-disulfide oxidoreductase [Coccidioides immitis
RS]
Length = 566
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 158/340 (46%), Gaps = 80/340 (23%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
+ S E + LLH +VG GPTG E + L DF+ D+ Q Y +KD +TL + A +
Sbjct: 246 MPTTSFELRKNLLHFAIVGAGPTGTELAAALCDFLHDDMFQIYPTLKDSTRITLYDVAPK 305
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLV--------------RGIVKDVDSQ---KLILNDGT 104
+LS FD L YA T +S+ GV + + ++D + L +G
Sbjct: 306 VLSMFDKTLSDYAMTVMSREGVEVKTNHHIQELRWGEPHKDPAPEMDPKGCLTLKTKEGG 365
Query: 105 EVPYGLLVWSTG----------VGP-------STLVK----SLDLPKSPGGRIG------ 137
E G+ VW+TG +GP S LV+ S + PKS +I
Sbjct: 366 EEGVGMCVWATGNEMNKFVNDSLGPLEQFPTFSALVQPGHTSPNDPKSVAWKIKKAPKTG 425
Query: 138 ---IDEWLRV---------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
+D LRV +QDVFA+GD + LES PA AQ ++ +L
Sbjct: 426 ALLVDNHLRVQLESEDGRRAVMQDVFALGD-NCMLESDSP---PATAQATNQEACWLAKR 481
Query: 186 LNR--IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE-SKGLSLAG 242
LN+ IG+ G F + + G +A +G KAL+ + ++ KG+ G
Sbjct: 482 LNKGGIGQEPG--------------FSFNNFGMIAYLGSSKALMQIPSSEHLPKGIK--G 525
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
+WL+W+ AYLT +SWRNR + +W + + FGRDISR
Sbjct: 526 RTAWLIWKGAYLTMSLSWRNRLRILYSWMSNWAFGRDISR 565
>gi|325300007|ref|YP_004259924.1| NADH dehydrogenase (ubiquinone) [Bacteroides salanitronis DSM
18170]
gi|324319560|gb|ADY37451.1| NADH dehydrogenase (ubiquinone) [Bacteroides salanitronis DSM
18170]
Length = 451
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 143/281 (50%), Gaps = 37/281 (13%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEA 59
+E+E+ LL+ V+VGGG TGVE +G L++ +RY KDY + + LIEA
Sbjct: 156 TEQERRELLNIVIVGGGATGVEIAGALAEM------KRYVLPKDYPDMNENLLQIYLIEA 209
Query: 60 N-EILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV 117
+ +LS + L + G+ + + V D + K+IL DGT++P +W +GV
Sbjct: 210 SSRLLSGMAPVSSQKSAEFLRRMGINVWLDKKVMDYRNHKVILEDGTQIPTRTFIWVSGV 269
Query: 118 GPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-C--SGYLESTGKTVLPALAQV 174
+T+ GGRI +D + + ++F +GD C SG E G P LAQV
Sbjct: 270 RANTIGNMPAASLGRGGRIKVDAYNKAEGFDNIFCIGDQCIMSGDKEYPGGH--PQLAQV 327
Query: 175 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 234
A +QG L + L R+ K + PF YR+LGSMAT+GR KA+ +
Sbjct: 328 AIQQGSLLAANLIRLQKGKAMK-----------PFRYRNLGSMATVGRNKAVAEF----- 371
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
L G+++WL+W +L ++ RN+ V +NW +++
Sbjct: 372 -SSLKTQGWIAWLLWLVVHLRSILGVRNKINVLLNWMWSYL 411
>gi|7269676|emb|CAB79624.1| putative NADH dehydrogenase [Arabidopsis thaliana]
Length = 559
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 105/164 (64%), Gaps = 9/164 (5%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L G++EE++ R LH V+VGGGPTGVEF+ EL DFI+ D+ + Y VK+ + +TLI++ +
Sbjct: 203 LPGLTEEQRRRKLHFVIVGGGPTGVEFAAELHDFIIEDITKIYPSVKELVKITLIQSGDH 262
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRGI----VKDVDSQKLILNDG--TEVPYGLLVWST 115
IL++FD+R+ +A + ++ G+ + G+ V D D + + G +P+GL++WST
Sbjct: 263 ILNTFDERISSFAEQKFTRDGIDVQTGMRVMSVTDKDITVKVKSSGELVSIPHGLILWST 322
Query: 116 GVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 157
GVG ++ GGR + +EWL+V ++V+AVGDC+
Sbjct: 323 GVGTRPVISDFMEQVGQGGRRAVATNEWLQVTGCENVYAVGDCA 366
>gi|50309857|ref|XP_454942.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644077|emb|CAH00029.1| KLLA0E21891p [Kluyveromyces lactis]
gi|62868402|emb|CAD43037.2| putative NADPH dehydrogenase [Kluyveromyces lactis]
Length = 547
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 163/304 (53%), Gaps = 41/304 (13%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
++ E+ RLL VVVGGGPTGVEF+ EL D++ +D+ + + I VTL+EA IL+
Sbjct: 255 NDPERKRLLSFVVVGGGPTGVEFAAELQDYVDQDLSKWIPEISKEIKVTLVEALPNILNM 314
Query: 66 FDDRLRHYATT--QLSKSGVRLVRGIVKDVDSQKLILN--DGTE-VPYGLLVWSTGVGPS 120
FD L YA + K V+L + +VK+V+S + D TE +PYGLLVW+TG P
Sbjct: 315 FDKSLWQYAQDLFAMEKIDVKL-KTMVKNVNSTTITAQCGDATEDIPYGLLVWATGNAPR 373
Query: 121 TLVKSL--DLPKSPGGR-IGIDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPAL---AQ 173
+ K+L L + R + I++ +++ +D ++A+GDC T P L AQ
Sbjct: 374 EVSKNLMAKLEQQNSRRGLLINDKMQLLGAEDSIWAIGDC---------TFFPGLFPTAQ 424
Query: 174 VAERQGKYLFSLLNR----------IGKAGGGRANSAKDMELG------DPFVYRHLGSM 217
VA ++ +YL L + I K S +L PF Y H G++
Sbjct: 425 VAHQEAEYLTETLKQQYKIDQLKWEISKTTNATETSKLHSKLDRIVKQQKPFKYNHQGTL 484
Query: 218 ATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFG 277
A IG +A+ D+ ESK +AG ++L W+SAYL +S+RNR VA++WA + G
Sbjct: 485 AYIGSEQAIADVAVG-ESK-YQMAGSFTFLFWKSAYLGMCLSFRNRILVAMDWAKVYFLG 542
Query: 278 RDIS 281
RD S
Sbjct: 543 RDSS 546
>gi|408377227|ref|ZP_11174830.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Agrobacterium albertimagni AOL15]
gi|407749186|gb|EKF60699.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Agrobacterium albertimagni AOL15]
Length = 427
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 138/269 (51%), Gaps = 27/269 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDF----IMRDVRQRYSHVKDYIHVTLIEAN-EI 62
E E+ RLL VV+GGGPTGVE +G +S+ I RD R + + +HV L+EA I
Sbjct: 157 EAEQRRLLTSVVIGGGPTGVEMAGAISELGRFMIERDFR---TLRPEQLHVVLVEAGPRI 213
Query: 63 LSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPST 121
L++F + L +YA L GV + + V+DV ++ + + DG +P +VW GV S
Sbjct: 214 LATFPENLSNYAADYLRNIGVDIRLNTPVEDVTAEGVQVKDGF-LPASCIVWGAGVKASP 272
Query: 122 LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 181
L + PGGR+ + L V ++ V+A+GD + L+ G+ LPALAQVA++QG +
Sbjct: 273 AADWLGISPGPGGRLPVARDLSVDGLEGVYAIGDTALALDEDGEA-LPALAQVAKQQGTF 331
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
L L G N F + + G+ A IGR A+ D L
Sbjct: 332 LGKALKSSLLKGAAVPN----------FRFHNRGNTAVIGRNAAIFDF------GTWQLK 375
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
G +WL+W ++ +V++ R V+V W
Sbjct: 376 GRFAWLLWAIVHVYLLVNFEKRLLVSVQW 404
>gi|219847442|ref|YP_002461875.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Chloroflexus aggregans DSM 9485]
gi|219541701|gb|ACL23439.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Chloroflexus aggregans DSM 9485]
Length = 442
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 142/282 (50%), Gaps = 31/282 (10%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEA-NEILSSFDD 68
++ LL VVGGGPTGVE +G + I +R+ Y + V LIEA N IL+SF +
Sbjct: 163 RAALLTFAVVGGGPTGVELAGAFIELIRHVIRRDYPMLDTRQARVVLIEATNHILASFPE 222
Query: 69 RLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L+H A +L + GV + ++ V D L DG+ +P +VW+TGV + L +L
Sbjct: 223 SLQHAALQRLRQMGVEVRLQTQVADAHHDGLTFRDGSFLPAATVVWATGVRGAPLADALG 282
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES-----TGKTVLPALAQVAERQGKYL 182
+ G R+ + L +P+ + VF VGD + YLE V P Q+ E+ + +
Sbjct: 283 VTLGRGARVVVTPHLTLPADERVFVVGDMA-YLEGYRPGVAYPMVAPVAIQMGEQAARNI 341
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
+ LN + PF Y G MATIGR A++D + G+ L+G
Sbjct: 342 IAQLNH---------------QPMLPFHYIDKGQMATIGRSAAVLD------AFGIRLSG 380
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWA-TTFVFGRDISRI 283
+L+W+ W +L +V +RNR V +NWA + F + R + I
Sbjct: 381 WLAWVGWLFVHLIALVGFRNRVLVLLNWAYSYFTYDRGVRLI 422
>gi|222086349|ref|YP_002544883.1| NADH dehydrogenase [Agrobacterium radiobacter K84]
gi|221723797|gb|ACM26953.1| NADH dehydrogenase protein [Agrobacterium radiobacter K84]
Length = 405
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 141/276 (51%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDD 68
+ LL +VG GPTGVE +G +++ + + + + ++ + L+EA +L+SF +
Sbjct: 138 RDALLTFTIVGAGPTGVELAGIIAELARKTLPKEFRNIDTSKARIILVEAGPRVLASFVE 197
Query: 69 RLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L K GV + G V ++ + + D T VP +VW+ GV S K LD
Sbjct: 198 ELSDYAQKALEKLGVEIHLGKPVTSCTAEGVTIGD-TFVPCRTIVWAAGVQASPAAKWLD 256
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ +D+ L P D+F +GD + G V P +A A++QG Y+ ++
Sbjct: 257 VPADRAGRVVVDKELHAPGQPDIFVIGDTAAVTREDGSPV-PGIAPAAKQQGAYVAKVI- 314
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
RA A G PF YRH GS+ATIG+ A++D + K L G+L+W
Sbjct: 315 --------RAKLAGQPAPG-PFHYRHQGSLATIGKSAAIIDFGRIK------LKGWLAWW 359
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
VW A++ ++ R R VA +W ++ + +R+
Sbjct: 360 VWGLAHIYFLIGTRWRIAVAWSWLWIYISRQHSARL 395
>gi|115463241|ref|NP_001055220.1| Os05g0331200 [Oryza sativa Japonica Group]
gi|55167957|gb|AAV43826.1| putative NADPH dehydrogenase [Oryza sativa Japonica Group]
gi|55168034|gb|AAV43902.1| putative NADPH dehydrogenase [Oryza sativa Japonica Group]
gi|113578771|dbj|BAF17134.1| Os05g0331200 [Oryza sativa Japonica Group]
gi|125551853|gb|EAY97562.1| hypothetical protein OsI_19490 [Oryza sativa Indica Group]
gi|215704782|dbj|BAG94810.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222631147|gb|EEE63279.1| hypothetical protein OsJ_18089 [Oryza sativa Japonica Group]
Length = 575
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 108/185 (58%), Gaps = 12/185 (6%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L ++EEE+ + LH VV+GGGPTGVEF+ EL DF+ D+ + Y VK Y ++++IEA +
Sbjct: 205 LPNLTEEERKKNLHFVVIGGGPTGVEFAAELHDFVNEDLAKLYPDVKKYANISVIEAGDH 264
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDGT---EVPYGLLVWSTG 116
IL+ FD R+ +A + ++G+ L +VK D + N T VPYG+ VWSTG
Sbjct: 265 ILTMFDKRITQFAEDKFKRTGIDLKTNFKVVKVSDKAITMTNSATGEIAVPYGMAVWSTG 324
Query: 117 VGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+G L+ +D K G + DEWLRV DV+A+GDC+ + + ++
Sbjct: 325 IGTRPLI--MDFMKQVGQANRRVLATDEWLRVHGCDDVYALGDCATITQRKVMEDIASIF 382
Query: 173 QVAER 177
+VA++
Sbjct: 383 RVADK 387
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Query: 167 VLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGR 222
+LPA AQVA ++G YL + N++ + G PF YRHLG A +G
Sbjct: 460 MLPATAQVASQEGAYLANCFNKMKYCEENPEGPLRIRGTGRHRFKPFRYRHLGQFAPLGG 519
Query: 223 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
+ L + G S WL W S Y ++ SWR R V +W F++GRD S
Sbjct: 520 EQTAAQLPGDWIHVGHST----QWL-WYSVYASKQFSWRTRMLVVSDWGRRFIYGRDSSS 574
Query: 283 I 283
+
Sbjct: 575 L 575
>gi|398380303|ref|ZP_10538421.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium sp. AP16]
gi|397721619|gb|EJK82167.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium sp. AP16]
Length = 425
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 141/276 (51%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDD 68
+ LL +VG GPTGVE +G +++ + + + + ++ + L+EA +L+SF +
Sbjct: 158 RDALLTFTIVGAGPTGVELAGIIAELARKTLPKEFRNIDTSKARIILVEAGPRVLASFVE 217
Query: 69 RLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L K GV + G V ++ + + D T VP +VW+ GV S K LD
Sbjct: 218 ELSDYAQKALEKLGVEIHLGKPVTSCTAEGVTIGD-TFVPCRTIVWAAGVQASPAAKWLD 276
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ +D+ L P D+F +GD + G V P +A A++QG Y+ ++
Sbjct: 277 VPADRAGRVVVDKELHAPGQPDIFVIGDTAAVTREDGSPV-PGIAPAAKQQGAYVAKVI- 334
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
RA A G PF YRH GS+ATIG+ A++D + K L G+L+W
Sbjct: 335 --------RAKLAGQPAPG-PFHYRHQGSLATIGKSAAIIDFGRIK------LKGWLAWW 379
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
VW A++ ++ R R VA +W ++ + +R+
Sbjct: 380 VWGLAHIYFLIGTRWRIAVAWSWLWIYISRQHSARL 415
>gi|374849468|dbj|BAL52483.1| pyridine nucleotide-disulphide oxidoreductase family protein
[uncultured candidate division OP1 bacterium]
gi|374849615|dbj|BAL52626.1| pyridine nucleotide-disulphide oxidoreductase family protein
[uncultured candidate division OP1 bacterium]
gi|374856762|dbj|BAL59615.1| pyridine nucleotide-disulphide oxidoreductase family protein
[uncultured candidate division OP1 bacterium]
Length = 425
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 146/269 (54%), Gaps = 22/269 (8%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSFDD 68
+ R L V+VG GP GVE++G LS+ I + + +S + + + L+EA ++L +F
Sbjct: 152 RQRWLTFVIVGAGPNGVEYAGALSELIRLVLVRDFSELDMKSVRIVLVEALGQVLPAFAP 211
Query: 69 RLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
+L YA QL + G+ + + V DV + L+ G + L+W+ GV S LV
Sbjct: 212 KLGQYAQWQLERRGIEVRLNTRVLDVSGDTVRLSSGETLETKTLIWTAGVKASDLVTVPP 271
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
LP++ GRI +D++LR ++VF +GD + +++ + LP LA+ A ++G ++ +
Sbjct: 272 LPRTRAGRIEVDQFLRAKGYENVFVIGDLAAFVQDGRE--LPMLARPAMQEGTHVAENIL 329
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
R+G+ + PF YR G MATIGR A+ L K +SL GF+ WL
Sbjct: 330 RLGRG-----------QSLIPFRYRDPGIMATIGRNSAVAQL------KRVSLTGFIGWL 372
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVF 276
W +L ++ +RNRF V +NWA ++F
Sbjct: 373 AWLLLHLILLIGFRNRFAVLLNWAWEYIF 401
>gi|365766458|gb|EHN07954.1| Nde2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 527
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 162/302 (53%), Gaps = 34/302 (11%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILS 64
+++ E+ RLL VVVGGGPTGVEF+ EL D+I +D+R+ + + V LIEA IL+
Sbjct: 233 VNDPERKRLLTFVVVGGGPTGVEFAAELQDYINQDLRKWMPDLSKEMKVILIEALPNILN 292
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL-ILNDG---TEVPYGLLVWSTGVGP 119
FD L YA ++ + L V VK V+ + L +G T++ YG+LVW+TG P
Sbjct: 293 MFDKTLIKYAEDLFARDEIDLQVNTAVKVVEPTYIRTLQNGQTNTDIEYGMLVWATGNEP 352
Query: 120 STLVKSL--DLPKSPGGR-IGIDEWLRVP-SVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
K+L +P+ R + I++ L + S ++A+GDC+ + TG P AQVA
Sbjct: 353 IDFSKTLMSRIPEQTNRRGLLINDKLELLGSENSIYAIGDCTAH---TG--FFPT-AQVA 406
Query: 176 ERQGKYLFSLLNR---IGKAGGGRANSAKDMELG-------------DPFVYRHLGSMAT 219
++G+YL +L++ I + NS + E+ D F Y+H+G++A
Sbjct: 407 HQEGEYLAKILDKKLQIEQLEWDMLNSTDETEVSRLQKEVNLRKSKLDKFNYKHMGALAY 466
Query: 220 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
IG A+ DL S L G ++L W+SAYL +S RNR +A++W + GRD
Sbjct: 467 IGSETAIADLHMGDSS--YQLKGMFAFLFWKSAYLAMCLSIRNRILIAMDWTKVYFLGRD 524
Query: 280 IS 281
S
Sbjct: 525 SS 526
>gi|357061673|ref|ZP_09122417.1| hypothetical protein HMPREF9332_01975 [Alloprevotella rava F0323]
gi|355373538|gb|EHG20855.1| hypothetical protein HMPREF9332_01975 [Alloprevotella rava F0323]
Length = 450
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 144/283 (50%), Gaps = 33/283 (11%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVT 55
L SE+E+ LL+ V+VGGG TGVE +G L++ + Y KDY + +
Sbjct: 151 LTCASEQERQELLNVVIVGGGATGVEVAGALAEM------KNYILPKDYPDMDSSLMQIY 204
Query: 56 LIEA-NEILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVW 113
LIEA N +L++ + + +A L + GV ++ +V ++ ++ L DG+ + +W
Sbjct: 205 LIEAGNRLLAAMNPKNSSHAEQYLREMGVNVMLNKMVTGYENHRVQLKDGSSIATRTFIW 264
Query: 114 STGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALA 172
+GV + GGRI +DE+ RV + VFA+GD C + P LA
Sbjct: 265 VSGVAAQPVGNLGTEFLGRGGRIKVDEYNRVTGLDGVFAIGDQCLMTADEDYPNGHPQLA 324
Query: 173 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 232
QVA +QG+ L L R+ K+ EL F YR+LG+MAT+GR +A+ + +
Sbjct: 325 QVAIQQGRLLAKNLQRL----------EKNKEL-KAFHYRNLGAMATVGRNRAIAEFSK- 372
Query: 233 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+ + GF++WL+W +L ++ RN+ V NW +V
Sbjct: 373 -----IRMHGFVAWLMWLFVHLRSILGVRNKIIVLFNWIWNYV 410
>gi|333984106|ref|YP_004513316.1| NADH dehydrogenase (ubiquinone) [Methylomonas methanica MC09]
gi|333808147|gb|AEG00817.1| NADH dehydrogenase (ubiquinone) [Methylomonas methanica MC09]
Length = 428
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 137/268 (51%), Gaps = 27/268 (10%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSF 66
+ + LL V+VGGGPTGVE +G +++ + + + H+ + + L++A IL F
Sbjct: 156 QRRRALLTFVIVGGGPTGVELAGAVAEISRKALVHEFRHIAPESSRIILVDAGPNILKGF 215
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
D++L A L GV ++ GI VK + + L DG ++ ++W+ GV S +
Sbjct: 216 DEKLSKRALKDLKSLGVEVMNGIRVKSIGPDSVDL-DGNQISTTSVIWAAGVTASPAAEW 274
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
L + RI +D + V + ++A+GD S Y+ + T LP +A VA++QGK+L
Sbjct: 275 LGIQADHSQRIPVDANMAVRGFEQIYAIGDTSNYVPAGSDTPLPGVAAVAKQQGKFL--- 331
Query: 186 LNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
GR A + G P F YR GSMATIGR KA+V L G L G
Sbjct: 332 ---------GRYILA--LVSGKPLPTFKYRDFGSMATIGRNKAVVRLL------GWRLTG 374
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+WL+W ++ ++ + RF VA NW
Sbjct: 375 AFAWLLWGVVHIYFLIGFPRRFRVAFNW 402
>gi|303317938|ref|XP_003068971.1| Pyridine nucleotide-disulphide oxidoreductase family protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240108652|gb|EER26826.1| Pyridine nucleotide-disulphide oxidoreductase family protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 566
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 158/340 (46%), Gaps = 80/340 (23%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
+ S E + LLH +VG GPTG E + L DF+ D+ Q Y +KD +TL + A +
Sbjct: 246 MPTTSFELRKNLLHFAIVGAGPTGTELAAALCDFLHDDMFQIYPKLKDSTRITLYDVAPK 305
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLV--------------RGIVKDVDSQ---KLILNDGT 104
+LS FD L YA T +S+ GV + + ++D + L +G
Sbjct: 306 VLSMFDKTLSDYAMTVMSREGVEVKTNHHIQELRWGEPHKDPAPEMDPKGCLTLKTKEGG 365
Query: 105 EVPYGLLVWSTG----------VGP-------STLVK----SLDLPKSPGGRIG------ 137
E G+ VW+TG +GP S L + S + PKS +I
Sbjct: 366 EEGVGMCVWATGNEMNKFVNDSLGPLEQFPTFSALFQPGHTSSNDPKSVAWKIKKAPKTG 425
Query: 138 ---IDEWLRV---------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
+D LRV +QDVFA+GD + LES PA AQ ++ +L
Sbjct: 426 ALLVDNHLRVQLESEDGRGAVMQDVFALGD-NCMLESDSP---PATAQATNQEACWLAKR 481
Query: 186 LNR--IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE-SKGLSLAG 242
LN+ IG+ G F +++ G +A +G KAL+ + ++ KG+ G
Sbjct: 482 LNKGGIGQEPG--------------FSFKNFGMIAYLGSSKALMQIPSSEHLPKGIK--G 525
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
+WL+W+ AYLT +SWRNR + +W + + FGRDISR
Sbjct: 526 RTAWLIWKGAYLTMSLSWRNRLRILYSWMSNWAFGRDISR 565
>gi|221215312|ref|ZP_03588277.1| DoxD family protein/pyridine nucleotide-disulfide oxidoreductase
[Burkholderia multivorans CGD1]
gi|221164744|gb|EED97225.1| DoxD family protein/pyridine nucleotide-disulfide oxidoreductase
[Burkholderia multivorans CGD1]
Length = 435
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 141/282 (50%), Gaps = 29/282 (10%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELS----DFIMRDVRQRYSHVKDYIHVTLIEAN-EIL 63
++++ L V++GGGPTGVE +G ++ D + RD R S V LIEA +L
Sbjct: 156 QQRAALQTFVIIGGGPTGVELAGTIAELARDTLARDFR---SIDPSTSRVVLIEAGPRLL 212
Query: 64 SSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
S F + L Y L K GV +V G S ++ G + +VW+ GV S
Sbjct: 213 SVFPEDLSAYTRQALEKLGVEVVLGTPVTECSADGVVYGGKPLSAKTIVWAAGVKASPAA 272
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
+ L GR+ + L V +VFA+GD + + GK V P +A A++QGKY+
Sbjct: 273 RWLGAASDRAGRVVVGPDLTVAGRPEVFAIGDTASCTMADGKPV-PGIAPAAKQQGKYVA 331
Query: 184 SLLNR--IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
+L+ R GK+ G PF+YRH G++ATIGR A++D+ + K L
Sbjct: 332 NLIGRRLKGKSADG------------PFIYRHQGNLATIGRSLAVIDMGRVK------LR 373
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G +W +W+ A++ ++ RNR VA++W G SRI
Sbjct: 374 GAFAWWIWKLAHIYFLIGTRNRLSVALSWVWNHSIGYRGSRI 415
>gi|6320118|ref|NP_010198.1| NADH-ubiquinone reductase (H(+)-translocating) NDE2 [Saccharomyces
cerevisiae S288c]
gi|74676439|sp|Q07500.1|NDH2_YEAST RecName: Full=External NADH-ubiquinone oxidoreductase 2,
mitochondrial; AltName: Full=External NADH dehydrogenase
2; Flags: Precursor
gi|1431110|emb|CAA98651.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151941917|gb|EDN60273.1| type II NAD(P)H:quinone oxidoreductase [Saccharomyces cerevisiae
YJM789]
gi|190405091|gb|EDV08358.1| type II NAD(P)H:quinone oxidoreductase [Saccharomyces cerevisiae
RM11-1a]
gi|256274109|gb|EEU09020.1| Nde2p [Saccharomyces cerevisiae JAY291]
gi|259145160|emb|CAY78424.1| Nde2p [Saccharomyces cerevisiae EC1118]
gi|285810950|tpg|DAA11774.1| TPA: NADH-ubiquinone reductase (H(+)-translocating) NDE2
[Saccharomyces cerevisiae S288c]
gi|323338454|gb|EGA79679.1| Nde2p [Saccharomyces cerevisiae Vin13]
gi|323349457|gb|EGA83681.1| Nde2p [Saccharomyces cerevisiae Lalvin QA23]
gi|392300032|gb|EIW11123.1| Nde2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 545
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 162/302 (53%), Gaps = 34/302 (11%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILS 64
+++ E+ RLL VVVGGGPTGVEF+ EL D+I +D+R+ + + V LIEA IL+
Sbjct: 251 VNDPERKRLLTFVVVGGGPTGVEFAAELQDYINQDLRKWMPDLSKEMKVILIEALPNILN 310
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL-ILNDG---TEVPYGLLVWSTGVGP 119
FD L YA ++ + L V VK V+ + L +G T++ YG+LVW+TG P
Sbjct: 311 MFDKTLIKYAEDLFARDEIDLQVNTAVKVVEPTYIRTLQNGQTNTDIEYGMLVWATGNEP 370
Query: 120 STLVKSL--DLPKSPGGR-IGIDEWLRVP-SVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
K+L +P+ R + I++ L + S ++A+GDC+ + TG P AQVA
Sbjct: 371 IDFSKTLMSRIPEQTNRRGLLINDKLELLGSENSIYAIGDCTAH---TG--FFPT-AQVA 424
Query: 176 ERQGKYLFSLLNR---IGKAGGGRANSAKDMELG-------------DPFVYRHLGSMAT 219
++G+YL +L++ I + NS + E+ D F Y+H+G++A
Sbjct: 425 HQEGEYLAKILDKKLQIEQLEWDMLNSTDETEVSRLQKEVNLRKSKLDKFNYKHMGALAY 484
Query: 220 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
IG A+ DL S L G ++L W+SAYL +S RNR +A++W + GRD
Sbjct: 485 IGSETAIADLHMGDSS--YQLKGMFAFLFWKSAYLAMCLSIRNRILIAMDWTKVYFLGRD 542
Query: 280 IS 281
S
Sbjct: 543 SS 544
>gi|414168093|ref|ZP_11424297.1| hypothetical protein HMPREF9696_02152 [Afipia clevelandensis ATCC
49720]
gi|410888136|gb|EKS35940.1| hypothetical protein HMPREF9696_02152 [Afipia clevelandensis ATCC
49720]
Length = 425
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 147/279 (52%), Gaps = 19/279 (6%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILS 64
+E E++RLL V++G GPTGVE +G +++ +R + + V LIEA ILS
Sbjct: 152 NEAERARLLTFVIIGAGPTGVELAGTIAELAHDTLRGDFRNFDTRKARVILIEAGPRILS 211
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
F + L YA L++ GV + G S++ + G +P ++W+ GV S +
Sbjct: 212 GFTEDLSDYAQRALTRLGVEIRLGHAVSRCSEEGVELGGEFLPASTIIWAAGVAASPAAE 271
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
L P GR+ + L VP D+F +GD + ++EST ++P +A A+++G+Y
Sbjct: 272 WLHAPADRAGRVMVMPDLTVPGHPDIFVIGDAA-HVESTDGKLVPGVAPAAKQEGQY--- 327
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
+ +A R K G+ FVY++ G++ATIG+ A+VD + L G L
Sbjct: 328 ----VARAIQARLRGEK---FGENFVYKNAGNLATIGKRAAIVDF------GWIQLKGRL 374
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W +W A++ ++ RNR VA+NW +V G+ +R+
Sbjct: 375 AWWIWGIAHIFFLIGLRNRLAVAMNWLWIYVRGQRSARL 413
>gi|418695893|ref|ZP_13256905.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
str. H1]
gi|421108486|ref|ZP_15569023.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
str. H2]
gi|409956347|gb|EKO15276.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
str. H1]
gi|410006335|gb|EKO60094.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira kirschneri
str. H2]
Length = 422
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 151/284 (53%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN- 60
L+G E KS LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA+
Sbjct: 149 LSGDPEVVKS-LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEASP 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L +FD L + +L + GV ++ G V D++ + + L +G +P ++W+ GV
Sbjct: 208 RLLMTFDPSLGEFTKKRLERRGVEVLTGTRVIDINERGVQL-EGKMIPTQTVIWAAGVQA 266
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+++ +L + GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG
Sbjct: 267 NSIASTLGVTLDRGGRVIVDEFCNIEGHSEVFVIGDIASYSKGLERP-LPGVSPVAMQQG 325
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+Y+ SL+ N K+ + PF Y GSMATIGR A+ + L
Sbjct: 326 RYVASLIQ----------NDLKNKKR-KPFHYIDKGSMATIGRTDAVAQVGI------LK 368
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G WL W +L V ++N+ + + W +++ R +R+
Sbjct: 369 MKGLFGWLAWLFVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|150397170|ref|YP_001327637.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Sinorhizobium medicae WSM419]
gi|150028685|gb|ABR60802.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Sinorhizobium medicae WSM419]
Length = 422
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 19/276 (6%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANE-ILSSFD 67
E+ LL ++G GPTGVE +G +++ R + + + + V L+EA IL +F
Sbjct: 153 ERDALLTFTIIGAGPTGVELAGIIAEMAHRTLPGEFRRIDTRLARVVLVEAGPRILPAFS 212
Query: 68 DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
++L YA+ +L K GV + G +++ + + VP LVW+ GV S K +
Sbjct: 213 EKLSAYASRELEKLGVEVRTGTPVTNCTEEGVTIGESFVPSRTLVWAAGVQASPAAKWVG 272
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+ GR + L P ++F VGD + ++ GK V P +A A++QG Y+ ++
Sbjct: 273 VEADRAGRAKVGPDLSAPDHPNIFIVGDTASVIQGDGKPV-PGIAPAAKQQGAYVAQVIR 331
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ GG A PF YRH GS+ATIG+ A++D + K L G L+W
Sbjct: 332 --CRLGGSPAPG--------PFRYRHQGSLATIGKRAAIIDFGRIK------LKGSLAWW 375
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W A++ ++ R+RF VA +W T++ G+ +R+
Sbjct: 376 IWGIAHIYFLIGTRSRFAVAWSWLWTYLSGQHSARL 411
>gi|292669723|ref|ZP_06603149.1| pyridine nucleotide-disulfide oxidoreductase [Selenomonas noxia
ATCC 43541]
gi|422343212|ref|ZP_16424140.1| hypothetical protein HMPREF9432_00200 [Selenomonas noxia F0398]
gi|292648520|gb|EFF66492.1| pyridine nucleotide-disulfide oxidoreductase [Selenomonas noxia
ATCC 43541]
gi|355378519|gb|EHG25699.1| hypothetical protein HMPREF9432_00200 [Selenomonas noxia F0398]
Length = 427
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 144/282 (51%), Gaps = 21/282 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--IHVTLIEA-NEILSS 65
+E+ R L+ V+VGGG TG+E +G L++ I D+ ++ H D+ +HV+L+EA +L
Sbjct: 154 DERRRHLNFVIVGGGATGIEMAGALAELI--DIFKKEFHSIDFDEVHVSLLEAMGSVLPM 211
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
L+ + L K GV + + V + D +L L+ G + ++W+ GV +K
Sbjct: 212 VPPDLQQHTIDVLRKKGVDVRLNTAVTEYDGNELKLSSGETIATKTVIWAAGVRAQDFIK 271
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGK---TVLPALAQVAERQGKY 181
GR+ ++E L V + VFA+GDC+ + T + TV P Q A + K
Sbjct: 272 DCGGEVDRAGRVVVEENLLVKGSERVFAIGDCANFHHGTERPLPTVAPVATQEAAQVKKN 331
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
+ +L++ GR+ +LG FVYR LG+MATIG+ +A+++ + +
Sbjct: 332 IMALIS-------GRSPD----QLGK-FVYRDLGAMATIGKGEAVMNGPFPVLGFMMKAS 379
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
GF +W W +L R+ F V+V W F FG +SRI
Sbjct: 380 GFFAWFAWMFVHLIRLAGRYADFTVSVKWIWNFFFGTRVSRI 421
>gi|24217097|ref|NP_714580.1| NADH dehydrogenase [Leptospira interrogans serovar Lai str. 56601]
gi|386076063|ref|YP_005990252.1| NADH dehydrogenase [Leptospira interrogans serovar Lai str. IPAV]
gi|418666176|ref|ZP_13227607.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Pyrogenes str. 2006006960]
gi|24202125|gb|AAN51595.1|AE011592_7 NADH dehydrogenase [Leptospira interrogans serovar Lai str. 56601]
gi|353459725|gb|AER04269.1| NADH dehydrogenase [Leptospira interrogans serovar Lai str. IPAV]
gi|410758123|gb|EKR19722.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Pyrogenes str. 2006006960]
Length = 422
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 151/284 (53%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN- 60
L+G E KS LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA+
Sbjct: 149 LSGDPEVVKS-LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEASP 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L +FD L + +L + GV ++ G V D++ + + L +G +P ++W+ GV
Sbjct: 208 RLLMTFDPSLGEFTKKRLERRGVEVLTGTRVIDINERGVQL-EGKMIPTQTVIWAAGVQA 266
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+++ +L + GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG
Sbjct: 267 NSIAATLGVTLDRGGRVIVDEFCNIEGHSEVFVIGDIASYSKGLERP-LPGVSPVAMQQG 325
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+Y+ SL+ N K+ + PF Y GSMATIGR A+ + L
Sbjct: 326 RYVASLIQ----------NDLKNKKR-KPFHYIDKGSMATIGRTDAVAQVGI------LK 368
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G WL W +L V ++N+ + + W +++ R +R+
Sbjct: 369 MKGLFGWLAWLFVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|418710585|ref|ZP_13271355.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Grippotyphosa str. UI 08368]
gi|410769174|gb|EKR44417.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Grippotyphosa str. UI 08368]
gi|456972328|gb|EMG12753.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Grippotyphosa str. LT2186]
Length = 422
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 151/284 (53%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN- 60
L+G E KS LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA+
Sbjct: 149 LSGDPEVVKS-LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEASP 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L +FD L + +L + GV ++ G V D++ + + L +G +P ++W+ GV
Sbjct: 208 RLLMTFDPSLGEFTKKRLERRGVEVLTGTRVIDINERGVQL-EGKMIPTQTVIWAAGVQA 266
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+++ +L + GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG
Sbjct: 267 NSIAATLGVTLDRGGRVIVDEFCNIEGHSEVFVIGDIASYSKGLERP-LPGVSPVAMQQG 325
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+Y+ SL+ N K+ + PF Y GSMATIGR A+ + L
Sbjct: 326 RYVASLIQ----------NDLKNKKR-KPFHYIDKGSMATIGRTDAVAQVGI------LK 368
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G WL W +L V ++N+ + + W +++ R +R+
Sbjct: 369 MKGLFGWLAWLFVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|375149381|ref|YP_005011822.1| NADH dehydrogenase (ubiquinone) [Niastella koreensis GR20-10]
gi|361063427|gb|AEW02419.1| NADH dehydrogenase (ubiquinone) [Niastella koreensis GR20-10]
Length = 424
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 140/279 (50%), Gaps = 37/279 (13%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEANE-ILSSF 66
+EK + L+ V+ GGGPTGVE +G L++ + Y +KD H+ LI+A + +L
Sbjct: 153 KEKEKHLNIVICGGGPTGVELAGMLAELGRNIALKEYPEIKDLRSHLYLIDAGKALLGPM 212
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
++ + AT L K GV ++ VKD + L+DG +P +L+W++G V
Sbjct: 213 SEKSQQEATRVLKKLGVHVINNTAVKDYQDDIVYLSDGRTIPTKVLIWASG------VIG 266
Query: 126 LDLPKSPGGRIG------IDEWLRVPSVQDVFAVGDCSGYLESTGKTVL---PALAQVAE 176
++P P IG +DE+ +V Q++F VGD L++T K P LAQVA
Sbjct: 267 REVPGLPAAVIGRGRRVLVDEFNKVQGSQNIFVVGDLC--LQTTDKNFPNGHPQLAQVAI 324
Query: 177 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
+QG L L R+ D PF Y GSMA I ++KA+ DL +
Sbjct: 325 QQGTLLGKNLTRL-----------LDNNPMKPFAYNDKGSMAIISKFKAVCDLPK----- 368
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
GF +WLVW ++ ++ +RN+ +A +W +F+
Sbjct: 369 -FFFKGFGAWLVWLFIHIIPLIGFRNKVKLAFSWGWSFI 406
>gi|417759660|ref|ZP_12407694.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. 2002000624]
gi|417766249|ref|ZP_12414201.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Bulgarica str. Mallika]
gi|417774062|ref|ZP_12421936.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. 2002000621]
gi|417786837|ref|ZP_12434522.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. C10069]
gi|418671350|ref|ZP_13232702.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. 2002000623]
gi|418725664|ref|ZP_13284282.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. UI 12621]
gi|418731802|ref|ZP_13290077.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. UI 12758]
gi|421119466|ref|ZP_15579786.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. Brem 329]
gi|400351076|gb|EJP03316.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Bulgarica str. Mallika]
gi|409944408|gb|EKN89991.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. 2002000624]
gi|409949689|gb|EKO04222.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. C10069]
gi|409961301|gb|EKO25048.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. UI 12621]
gi|410347617|gb|EKO98490.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. Brem 329]
gi|410576178|gb|EKQ39186.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. 2002000621]
gi|410581611|gb|EKQ49420.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. 2002000623]
gi|410773796|gb|EKR53822.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. UI 12758]
gi|455793279|gb|EMF44981.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Lora str. TE 1992]
gi|456825800|gb|EMF74178.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Canicola str. LT1962]
Length = 422
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 151/284 (53%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN- 60
L+G E KS LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA+
Sbjct: 149 LSGDPEVVKS-LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEASP 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L +FD L + +L + GV ++ G V D++ + + L +G +P ++W+ GV
Sbjct: 208 RLLMTFDPSLGEFTKKRLERRGVEVLTGTRVIDINERGVQL-EGKMIPTQTVIWAAGVQA 266
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+++ +L + GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG
Sbjct: 267 NSIAATLGVTLDRGGRVIVDEFCNIEGHSEVFVIGDIASYSKGLERP-LPGVSPVAMQQG 325
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+Y+ SL+ N K+ + PF Y GSMATIGR A+ + L
Sbjct: 326 RYVASLIQ----------NDLKNKKR-KPFHYIDKGSMATIGRTDAVAQVGI------LK 368
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G WL W +L V ++N+ + + W +++ R +R+
Sbjct: 369 MKGLFGWLAWLFVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|417772723|ref|ZP_12420611.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Pomona str. Pomona]
gi|418681090|ref|ZP_13242324.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Pomona str. Kennewicki LC82-25]
gi|418699098|ref|ZP_13260065.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Bataviae str. L1111]
gi|418704810|ref|ZP_13265677.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Hebdomadis str. R499]
gi|418712849|ref|ZP_13273578.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. UI 08452]
gi|421118511|ref|ZP_15578848.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|400327193|gb|EJO79448.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Pomona str. Kennewicki LC82-25]
gi|409945400|gb|EKN95416.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Pomona str. Pomona]
gi|410009870|gb|EKO68024.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|410761958|gb|EKR28129.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Bataviae str. L1111]
gi|410765423|gb|EKR36123.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Hebdomadis str. R499]
gi|410790618|gb|EKR84310.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. UI 08452]
gi|455668189|gb|EMF33435.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Pomona str. Fox 32256]
Length = 422
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 151/284 (53%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN- 60
L+G E KS LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA+
Sbjct: 149 LSGDPEVVKS-LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEASP 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L +FD L + +L + GV ++ G V D++ + + L +G +P ++W+ GV
Sbjct: 208 RLLMTFDPSLGEFTKKRLERRGVEVLTGTRVIDINERGVQL-EGKMIPTQTVIWAAGVQA 266
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+++ +L + GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG
Sbjct: 267 NSIAATLGVTLDRGGRVIVDEFCNIEGHSEVFVIGDIASYSKGLERP-LPGVSPVAMQQG 325
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+Y+ SL+ N K+ + PF Y GSMATIGR A+ + L
Sbjct: 326 RYVASLIQ----------NDLKNKKR-KPFHYIDKGSMATIGRTDAVAQVGI------LK 368
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G WL W +L V ++N+ + + W +++ R +R+
Sbjct: 369 MKGLFGWLAWLFVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|207346986|gb|EDZ73312.1| YDL085Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 545
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 162/302 (53%), Gaps = 34/302 (11%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILS 64
+++ E+ RLL VVVGGGPTGVEF+ EL D+I +D+R+ + + V LIEA IL+
Sbjct: 251 VNDPERKRLLTFVVVGGGPTGVEFAAELQDYINQDLRKWMPDLSKEMKVILIEALPNILN 310
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL-ILNDG---TEVPYGLLVWSTGVGP 119
FD L YA ++ + L V VK V+ + L +G T++ YG+LVW+TG P
Sbjct: 311 MFDKTLIKYAEDLFARDEIDLQVNTAVKVVEPTYIRTLQNGQTNTDIEYGMLVWATGNEP 370
Query: 120 STLVKSL--DLPKSPGGR-IGIDEWLRVP-SVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
K+L +P+ R + I++ L + S ++A+GDC+ + TG P AQVA
Sbjct: 371 IDFSKTLMSRIPEQTNRRGLLINDKLELLGSENSIYAIGDCTAH---TG--FFPT-AQVA 424
Query: 176 ERQGKYLFSLLNR---IGKAGGGRANSAKDMELG-------------DPFVYRHLGSMAT 219
++G+YL +L++ I + NS + E+ D F Y+H+G++A
Sbjct: 425 HQEGEYLAKILDKKLQIEQLEWYMLNSTDETEVSRLQKEVNLRKSKLDKFNYKHMGALAY 484
Query: 220 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
IG A+ DL S L G ++L W+SAYL +S RNR +A++W + GRD
Sbjct: 485 IGSETAIADLHMGDSS--YQLKGMFAFLFWKSAYLAMCLSIRNRILIAMDWTKVYFLGRD 542
Query: 280 IS 281
S
Sbjct: 543 SS 544
>gi|418691054|ref|ZP_13252161.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. FPW2026]
gi|421127552|ref|ZP_15587775.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
gi|421133864|ref|ZP_15594008.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Grippotyphosa str. Andaman]
gi|400360090|gb|EJP16071.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans str. FPW2026]
gi|410021984|gb|EKO88765.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Grippotyphosa str. Andaman]
gi|410434869|gb|EKP84002.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
Length = 422
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 151/284 (53%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN- 60
L+G E KS LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA+
Sbjct: 149 LSGDPEVVKS-LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEASP 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L +FD L + +L + GV ++ G V D++ + + L +G +P ++W+ GV
Sbjct: 208 RLLMTFDPSLGEFTKKRLERRGVEVLTGTRVIDINERGVQL-EGKMIPTQTVIWAAGVQA 266
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+++ +L + GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG
Sbjct: 267 NSIAATLGVTLDRGGRVIVDEFCNIEGHSEVFVIGDIASYSKGLERP-LPGVSPVAMQQG 325
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+Y+ SL+ N K+ + PF Y GSMATIGR A+ + L
Sbjct: 326 RYVASLIQ----------NDLKNKKR-KPFHYIDKGSMATIGRTDAVAQVGI------LK 368
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G WL W +L V ++N+ + + W +++ R +R+
Sbjct: 369 MKGLFGWLAWLFVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|349576995|dbj|GAA22164.1| K7_Nde2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 545
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 162/302 (53%), Gaps = 34/302 (11%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILS 64
+++ E+ RLL VVVGGGPTGVEF+ EL D+I +D+R+ + + V LIEA IL+
Sbjct: 251 VNDPERKRLLTFVVVGGGPTGVEFAAELQDYINQDLRKWMPDLSKEMKVILIEALPNILN 310
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL-ILNDG---TEVPYGLLVWSTGVGP 119
FD L YA ++ + L V VK V+ + L +G T++ YG+LVW+TG P
Sbjct: 311 MFDKTLIKYAEDLFARDEIDLQVNTAVKVVEPTYIRTLQNGQTNTDIEYGMLVWATGNEP 370
Query: 120 STLVKSL--DLPKSPGGR-IGIDEWLRVP-SVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
K+L +P+ R + I++ L + S ++A+GDC+ + TG P AQVA
Sbjct: 371 IDFSKTLMSRIPEQTNRRGLLINDKLELLGSENSIYAIGDCTAH---TG--FFPT-AQVA 424
Query: 176 ERQGKYLFSLLNR---IGKAGGGRANSAKDMELG-------------DPFVYRHLGSMAT 219
++G+YL +L++ I + NS + E+ D F Y+H+G++A
Sbjct: 425 HQEGEYLAKILDKKLQIEQLEWDILNSTDETEVSRLQKEVNLRKSKLDKFNYKHMGALAY 484
Query: 220 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
IG A+ DL S L G ++L W+SAYL +S RNR +A++W + GRD
Sbjct: 485 IGSETAIADLHMGDSS--YQLKGMFAFLFWKSAYLAMCLSIRNRILIAMDWTKVYFLGRD 542
Query: 280 IS 281
S
Sbjct: 543 SS 544
>gi|417933455|ref|ZP_12576780.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes SK182B-JCVI]
gi|340772018|gb|EGR94532.1| pyridine nucleotide-disulfide oxidoreductase [Propionibacterium
acnes SK182B-JCVI]
Length = 460
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSS 65
+ ++++ ++VGGGPTGVE +G L++ + + V D +HVTL+E A+ +L
Sbjct: 168 DTQRNKTFDVIIVGGGPTGVEMAGTLAEMKSIGIPAIFPDVSTDRVHVTLVEMADHLLMP 227
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
FD LRHY QL K GV + + + +V ++L DG +P +++W+ GVG V
Sbjct: 228 FDPALRHYTRRQLHKRGVDVRTKTAIAEVREDSVLLKDGQTLPADMVIWAAGVGAHKSVA 287
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
+ + GGRI L V +FA+GD + E P LAQ A + G+ +
Sbjct: 288 NWGFEQGRGGRIATAGTLLVNGQDRIFAIGDGAINTEDP----QPQLAQPAIQGGECV-- 341
Query: 185 LLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
A +ELG+P F Y G+MATIGR A+V L S+
Sbjct: 342 ------------ARQIVHLELGEPLEKFEYNDKGTMATIGRNSAVVQL-----SEKFKFT 384
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRDISRI 283
G +WL W + ++ ++ RNR +N ++ F R+ I
Sbjct: 385 GIGAWLTWVTVHVYTLLGGRNRLQAMINLGARYIAFHREAGAI 427
>gi|258652530|ref|YP_003201686.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Nakamurella multipartita DSM 44233]
gi|258555755|gb|ACV78697.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Nakamurella multipartita DSM 44233]
Length = 445
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 139/274 (50%), Gaps = 24/274 (8%)
Query: 4 AGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIE-ANE 61
A +EE+ L VVVG GPTGVE +G L++ + Y + H+ L+E +++
Sbjct: 170 AANTEED----LAIVVVGAGPTGVEMAGALAELRNDAMATVYPELDPRRTHIVLVEMSDK 225
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120
+L+ F LR +A L + GV L + V +V ++L G + G++VW+TGV
Sbjct: 226 VLAPFAPPLRDFAARALRERGVELRLNTSVAEVRPDGVVLGGGEFLKAGVVVWATGVTVP 285
Query: 121 TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGK 180
VK LP+ GGRI +D+ LRV +++FAVGD + E + PAL Q + GK
Sbjct: 286 AAVKDWGLPQGRGGRITVDKDLRVTGFKNIFAVGDIALLPEPLPQLAQPAL-QGGQHAGK 344
Query: 181 YLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 240
+ +L+ GR PF Y G+MAT+GR A+ D+ Q + + + L
Sbjct: 345 QVVALI-------AGRPTH--------PFHYHDKGTMATVGRRAAIADI-QLIKGRSIRL 388
Query: 241 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
G L+WL W ++ ++ RNR VN T +
Sbjct: 389 TGTLAWLAWLFVHIVMLLGNRNRLATFVNLTTKY 422
>gi|393788102|ref|ZP_10376233.1| hypothetical protein HMPREF1068_02513 [Bacteroides nordii
CL02T12C05]
gi|392656315|gb|EIY49954.1| hypothetical protein HMPREF1068_02513 [Bacteroides nordii
CL02T12C05]
Length = 432
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 135/269 (50%), Gaps = 20/269 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSF 66
+E+ +L+ ++VGGG TG+E SG L++ + Q Y + + + + LI+A +LS+F
Sbjct: 160 KEREKLMTFIIVGGGATGIELSGALAEMRKFILPQDYPDLDIEQMRIVLIDAGPRLLSAF 219
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
++ L+K GV + V V D ++ L L DGT +P + W GV +++
Sbjct: 220 SEKSSTEVQDYLAKKGVEIKVDSKVVDYENDLLTLGDGTAIPSTNIYWVAGVKANSIEGL 279
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
PG R+ +D + +V +VFA+GD + + P + Q A +Q K L
Sbjct: 280 PQDAYGPGNRLNVDVFNKVTGTNNVFAIGDTALMISEDYPRGHPQVVQPAIQQAKLLVQN 339
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
LN I K + PFVY + GSMATIGR A+V+L K + GF +
Sbjct: 340 LNNIEKGLPLK-----------PFVYHNKGSMATIGRNNAIVEL------KNIRFGGFPA 382
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
W VW +L +V +NR ++ ++W ++
Sbjct: 383 WAVWLFIHLMSIVGVKNRLFIFIDWMWSY 411
>gi|21233197|ref|NP_639114.1| NADH dehydrogenase [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66770139|ref|YP_244901.1| NADH dehydrogenase [Xanthomonas campestris pv. campestris str.
8004]
gi|21115048|gb|AAM43026.1| NADH dehydrogenase [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66575471|gb|AAY50881.1| NADH dehydrogenase [Xanthomonas campestris pv. campestris str.
8004]
Length = 428
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 139/267 (52%), Gaps = 23/267 (8%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDD 68
++ L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF D
Sbjct: 159 RAAWLSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPQQARVRLVEAGPRVLPSFPD 218
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L A QL + GV + G V ++D+ L D T VP +VW+ GV S L ++L
Sbjct: 219 DLTDKARKQLERLGVEVHTGTPVTNIDAFGYQLGD-TFVPARTVVWAAGVAASPLARTLG 277
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ ++ L VP ++F GD + ++ G+ V P +A A++ GK+
Sbjct: 278 VPLDRAGRVLVEPDLSVPGHPEIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH------ 329
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
I KA R + F Y+ G++ATIGR A+V + + L L+G ++W
Sbjct: 330 -IAKAIRARQRG----QAAPAFHYQDFGNLATIGRMAAIVHVGK------LKLSGIVAWW 378
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTF 274
W +A++ ++ +RNRF V VNWA +
Sbjct: 379 FWLAAHVYFLIGFRNRFVVLVNWAMAY 405
>gi|409438829|ref|ZP_11265892.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Rhizobium mesoamericanum STM3625]
gi|408749489|emb|CCM77068.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Rhizobium mesoamericanum STM3625]
Length = 423
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 145/276 (52%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VG GPTGVE +G +++ + + + + ++ V L+EA +L +F +
Sbjct: 153 RDALLTFTIVGAGPTGVELAGIIAELARKTLPREFRNIDTRKTRVVLVEAGPRVLPTFAE 212
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA+ L + GV L G V + ++ + + G +P +VW+ GV S K LD
Sbjct: 213 ELSAYASQALQELGVELHIGERVVECTTEGVETSQGF-IPSHTIVWAAGVQASPAAKWLD 271
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+ GR+ +++ L P DVF VGD + +++ G V P +A A++QG Y ++
Sbjct: 272 VAADRAGRVVVEKDLTAPGYPDVFVVGDTAAVMQTGGAPV-PGIAPAAKQQGAYAAKVI- 329
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
RA A D PF YRH GS+ATIG+ A++D + K L G+++W
Sbjct: 330 --------RARLAGD-PAPPPFCYRHQGSLATIGQSAAIIDFGRIK------LKGWIAWW 374
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 375 IWGIAHIYFLIGTRSRFAVAWSWLWIYLSGQHSARL 410
>gi|384426213|ref|YP_005635570.1| NADH dehydrogenase [Xanthomonas campestris pv. raphani 756C]
gi|341935313|gb|AEL05452.1| NADH dehydrogenase [Xanthomonas campestris pv. raphani 756C]
Length = 419
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 139/267 (52%), Gaps = 23/267 (8%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDD 68
++ L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF D
Sbjct: 150 RAAWLSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPQQARVRLVEAGPRVLPSFPD 209
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L A QL + GV + G V ++D+ L D T VP +VW+ GV S L ++L
Sbjct: 210 DLTDKARKQLERLGVEVHTGTPVTNIDAFGYQLGD-TFVPARTVVWAAGVAASPLARTLG 268
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ ++ L VP ++F GD + ++ G+ V P +A A++ GK+
Sbjct: 269 VPLDRAGRVLVEPDLSVPGHPEIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH------ 320
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
I KA R + F Y+ G++ATIGR A+V + + L L+G ++W
Sbjct: 321 -IAKAIRARQRG----QAAPAFHYQDFGNLATIGRMAAIVHVGK------LKLSGIVAWW 369
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTF 274
W +A++ ++ +RNRF V VNWA +
Sbjct: 370 FWLAAHVYFLIGFRNRFVVLVNWAMAY 396
>gi|373952091|ref|ZP_09612051.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Mucilaginibacter paludis DSM 18603]
gi|373888691|gb|EHQ24588.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Mucilaginibacter paludis DSM 18603]
Length = 437
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 139/274 (50%), Gaps = 26/274 (9%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILS 64
+ E + L+ VVVG GPTGVE SG +++ + + Y + KD + V L+E ++L
Sbjct: 154 TREAREPYLNFVVVGAGPTGVELSGSIAELRNHILHKDYPELNKDEMKVYLVEGLPKVLQ 213
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
++ + L + GV ++ + VKD D +++ DG + ++WS GV +
Sbjct: 214 VMSEQASAKSAEFLKEMGVEVMTSVMVKDYDGKQITFADGKSIKTHNVIWSAGVMGQVIE 273
Query: 124 KSLDLPK---SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGK 180
LPK S G RI D+ RV ++FA+GD + + + P +A VA +QGK
Sbjct: 274 ---GLPKEAISRGNRIQTDDINRVNGYANIFAIGDVAAVITTDTPKGHPGVAPVAIQQGK 330
Query: 181 YLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 240
+L L ++ + E +PF Y GSMATIGR KA+VD+ + +
Sbjct: 331 HLAKNLVKM-----------LNNEPTEPFKYFDKGSMATIGRNKAVVDIGK------IHF 373
Query: 241 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
GF +WL W +L +VS+RN+ V +NW ++
Sbjct: 374 QGFFAWLTWMFVHLISLVSFRNKVVVFINWIGSY 407
>gi|187922128|ref|YP_001893770.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Burkholderia phytofirmans PsJN]
gi|187713322|gb|ACD14546.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Burkholderia phytofirmans PsJN]
Length = 439
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 140/280 (50%), Gaps = 25/280 (8%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELS----DFIMRDVRQRYSHVKDYIHVTLIEANE-IL 63
++++ L V++GGGPTGVE +G ++ D + RD R S V LIEA + +L
Sbjct: 156 QQRAALQTFVIIGGGPTGVELAGTIAELARDTLARDFR---SIDPSTSRVVLIEAGQRLL 212
Query: 64 SSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
S F + L Y L K GV +V G S + ++ GT + +VW+ GV S
Sbjct: 213 SVFPEDLSAYTRQALEKLGVEVVLGTPVTGCSAEGVVYGGTPLSARTIVWAAGVQASPAA 272
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
+ L GR+ + L V ++FA+GD + GK V P +A A++QGKY+
Sbjct: 273 RWLSATSDRAGRVVVGPDLTVAGHPEIFAIGDTASCTMPDGKPV-PGIAPAAKQQGKYVA 331
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
SL+ R K + PF YRH G++ATIGR A++D+ + K L G
Sbjct: 332 SLIGR----------RLKGKPVDGPFKYRHQGNLATIGRSLAVIDMGRVK------LRGA 375
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W +W+ A++ ++ +NR VA++W G SRI
Sbjct: 376 FAWWIWKLAHIYFLIGTQNRLSVALSWVWNHSIGYRGSRI 415
>gi|421649690|ref|ZP_16090078.1| pyridine nucleotide-disulfide oxidoreductase [Acinetobacter
baumannii OIFC0162]
gi|445456005|ref|ZP_21445621.1| pyridine nucleotide-disulfide oxidoreductase [Acinetobacter
baumannii OIFC047]
gi|408513279|gb|EKK14908.1| pyridine nucleotide-disulfide oxidoreductase [Acinetobacter
baumannii OIFC0162]
gi|444778792|gb|ELX02798.1| pyridine nucleotide-disulfide oxidoreductase [Acinetobacter
baumannii OIFC047]
Length = 430
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 146/292 (50%), Gaps = 28/292 (9%)
Query: 2 FLAGISEEEKSR-------LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD--YI 52
LA E E+++ L V++GGGPTGVE SG +++ + +D R + D
Sbjct: 141 ILAAFEEAERTKDPILRKALQTFVIIGGGPTGVELSGTIAE-LAKDTLSRDFRLIDPRES 199
Query: 53 HVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLL 111
V LIEA +LS F ++L Y L + GV +V S+ ++ DG ++P +
Sbjct: 200 RVVLIEAGPRLLSVFPEKLSSYTRQALEQLGVEVVLRTPVTSCSEDGVVYDGKQLPAKTI 259
Query: 112 VWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 171
+W+ GV S + L++ GR+ +D L V ++F +GD + GK V P +
Sbjct: 260 IWAAGVQASPAARWLNVESDRAGRVLVDSNLTVTGHPEIFVIGDTAAVTMEDGKLV-PGI 318
Query: 172 AQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQ 231
A A++QGKY+ ++ N K ++ +PF Y H G++ATIGR +A+VD+ +
Sbjct: 319 APAAKQQGKYVAKTID----------NRLKGKDIKEPFKYHHQGNLATIGRSRAVVDMGK 368
Query: 232 NKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L G L+W W+ ++ ++ ++R VA++W G SR+
Sbjct: 369 ------FQLQGVLAWWFWKLIHIYFLIGVQSRLNVALSWLWNHSVGYRGSRL 414
>gi|390360886|ref|XP_001199016.2| PREDICTED: probable NADH dehydrogenase-like [Strongylocentrotus
purpuratus]
Length = 177
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 97/165 (58%), Gaps = 23/165 (13%)
Query: 121 TLVKSLDLPKSPGGRIGIDEWLRVPSVQD--VFAVGDCSGYLESTGKTVLPALAQVAERQ 178
+ ++LDLPK+ G++ DE LR+ +V+D V+A+GDC+ + + LP QVAE+Q
Sbjct: 34 SFTETLDLPKNAQGQLETDERLRIAAVEDSSVYALGDCADIIGNP----LPCTGQVAEKQ 89
Query: 179 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 238
G+YL LL G +E P+VY+ G +A +G Y+AL E+ L
Sbjct: 90 GRYLTKLLAHSGP-----------VEEVPPYVYKGFGMLAYLGDYQALT------ETPAL 132
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
GF SWL+WRSAYLTR+ SWR R V V+W T +FGRDISR
Sbjct: 133 KTQGFSSWLLWRSAYLTRLGSWRLRMQVPVDWTKTILFGRDISRF 177
>gi|226290348|gb|EEH45832.1| external NADH-ubiquinone oxidoreductase [Paracoccidioides
brasiliensis Pb18]
Length = 603
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 164/336 (48%), Gaps = 70/336 (20%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+E+E RLLH VVVGGGPTGVEF+GEL DF D+++ +KD+ +TL+EA +L +
Sbjct: 277 TEKEVKRLLHMVVVGGGPTGVEFAGELQDFFNDDLKKWVPEIKDHFKITLVEALPNVLPT 336
Query: 66 FDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTE---------VPYGLLVWST 115
F +L Y + + + L + VK V S K I + T+ +PYGLLVW+T
Sbjct: 337 FSKQLIDYTESTFKEEEITILTKTSVKKV-SDKYIEAEATKPDGSKEMETIPYGLLVWAT 395
Query: 116 GVGPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 171
G +V+ L +P+ R + ++E+L V ++++AVGDC+ T
Sbjct: 396 GNSIRGVVRDLINQIPEQKNSRRGLAVNEYLVVNGTENIWAVGDCAV-------TNYAPT 448
Query: 172 AQVAERQGKYLFSLLN-------------RIGKAGGGRANSAKDMELGD----------- 207
AQVA ++G +L L N ++ KA N ++ D
Sbjct: 449 AQVASQEGAFLARLFNSMAKTEAIDAQLKQLSKAQAEAQNEEARTKILDEIRGLQKVLRR 508
Query: 208 -----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSW-- 260
PF Y H GS+A IG+ +A+ D+ + S ++ G L++L WRS YL+ S
Sbjct: 509 IKQIGPFQYSHQGSLAYIGKERAVADV--SWLSGNIASGGTLTYLFWRSVYLSMCFSSKY 566
Query: 261 --------------RNRFYVAVNWATTFVFGRDISR 282
RNR VA +W +FGRD+SR
Sbjct: 567 FPTSPSLPAFLRISRNRVLVAFDWFKAKLFGRDVSR 602
>gi|424919003|ref|ZP_18342367.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. trifolii WSM597]
gi|392855179|gb|EJB07700.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. trifolii WSM597]
Length = 421
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 146/276 (52%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VG GPTGVE +G +++ + + + ++ V L+EA +L +F +
Sbjct: 153 RDALLTFTIVGAGPTGVELAGIIAELAHFTLPKEFRNIDTRKTRVVLVEAGPRVLPTFAE 212
Query: 69 RLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA T L K GV + G V D ++ + + + T V +VW+ GV S + L+
Sbjct: 213 ELSAYAQTALEKLGVEIHLGRPVTDCNADGVKIGE-TFVASRTIVWAAGVTASPAARWLN 271
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ +++ L P + DVF +GD + + GK V P +A A++QG Y+ ++
Sbjct: 272 VPADRAGRVVVEKDLSAPGLPDVFVIGDTASVMREDGKPV-PGIAPAAKQQGGYVAKVIR 330
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ G A + PF YRH GS+ATIG+ A++D + K L G+++W
Sbjct: 331 --ARLSGKSAPA--------PFRYRHQGSLATIGQSAAIIDFGRIK------LKGWIAWW 374
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 375 IWGLAHIYFLIGTRSRFSVAWSWLWIYLSGQHSARL 410
>gi|340959425|gb|EGS20606.1| hypothetical protein CTHT_0024400 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 571
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 156/361 (43%), Gaps = 96/361 (26%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
+S+++K LLH +VGGGPTG+EF+ EL D I D+ Y + ++ +T+ + A ++L
Sbjct: 224 LSDDDKRTLLHFAIVGGGPTGIEFAAELHDLIHEDLAPIYPQLMRFVRITVYDVAPKVLP 283
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDG------------------TEV 106
FD L YA + G+ + Q+L DG EV
Sbjct: 284 MFDQALAQYAMETFHRHGI----SVKTRHHLQRLRPADGPLGTRHGALKIKIKEYGDAEV 339
Query: 107 PYGLLVWSTGVGPSTLVKSL-------------------DLPKSPG-------------- 133
GL+VWSTG+ + + L P +P
Sbjct: 340 GAGLVVWSTGLMANPFISKLASKEISSPSAHAAANNPFTPPPSAPNIVPPPTRHLLRDSR 399
Query: 134 -GRIGIDEWLRV----------------PSVQDVFA------VGDCSGYLESTGKTVLPA 170
G + D LR P Q A +GDC+ LP
Sbjct: 400 TGGLLTDGHLRALTAPTNPNPAIFNSPKPPSQTATALPDVFVIGDCAVL---ASNPALPK 456
Query: 171 LAQVAERQGKYLFSLLNR------IGKAGGGRANSAKDMELGD--PFVYRHLGSMATIGR 222
AQVA +Q +L LN+ + G R N K + G+ PF +R+LG++ +G
Sbjct: 457 TAQVASQQASHLAKALNKAYDPSPLRFPDGTRENMEKMIVTGELRPFKFRNLGTLTYLGS 516
Query: 223 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
+KA+ +SK +L G+++W++WR+AYLT+ +S RN+ V V W +++FGR ISR
Sbjct: 517 WKAI------HQSKVDALRGWMAWVLWRTAYLTKSMSLRNKILVPVYWVVSWIFGRGISR 570
Query: 283 I 283
Sbjct: 571 F 571
>gi|380495625|emb|CCF32254.1| hypothetical protein CH063_00778 [Colletotrichum higginsianum]
Length = 418
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 155/289 (53%), Gaps = 34/289 (11%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L SE+++ L+ +VGGG G+E + EL D D+R + H+ +++T+ + A +
Sbjct: 154 LPTTSEQDQRDYLNIRIVGGGAIGIEAAAELWDLWFEDMRFLFPHLDGKLNITIHDVAPK 213
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120
ILS+FD L YAT+ L V+L+ G ++ V++ + + +PYGLL+W+TG +
Sbjct: 214 ILSTFDASLSEYATSSLEGKHVKLMTGSNIQRVEADAIFTKEDGRLPYGLLIWATGNKVN 273
Query: 121 TLVKSLDLPKSPGG--RIGIDEWLRV-----PSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
LV L + K G RI D++LRV + V+A+GD + + G++ LP LA+
Sbjct: 274 PLVDRLAVKKPESGLPRILTDKYLRVLRPDGSPMDGVYALGDAA---DIEGES-LPTLAE 329
Query: 174 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 233
VA ++G+YL +LN G+ PF Y+ +A +GR ++ R K
Sbjct: 330 VALQKGEYLTVVLNSNGEPA--------------PFNYKQRALLAYLGRRDGIIGGR--K 373
Query: 234 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
E G+S +WL WRS L SWR + ++++W ++ GRDI+R
Sbjct: 374 EWTGVS-----AWLAWRSGSLGWTRSWRRKIMISISWIFIWIAGRDIAR 417
>gi|338213153|ref|YP_004657208.1| NADH dehydrogenase (ubiquinone) [Runella slithyformis DSM 19594]
gi|336306974|gb|AEI50076.1| NADH dehydrogenase (ubiquinone) [Runella slithyformis DSM 19594]
Length = 434
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 134/265 (50%), Gaps = 20/265 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSF 66
EE+ L++ V+VGGGPTGVE +G L++ + + Y + D + + L E++ E+L
Sbjct: 158 EERHGLMNVVIVGGGPTGVEVAGTLAEMKRHILPKDYPELNFDSMQIYLYESSPEVLEVM 217
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
D+ A L+ GV L G+ + D D + N G + L+W+ GV + +
Sbjct: 218 SDQASKKAKEYLTDLGVNLRLGVRIIDFDGKYATTNTGDRLRTNNLIWAAGVKANAIEGI 277
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
GGR+ ++ + +V Q++FA+GD + E P LAQ A +QG+ L
Sbjct: 278 PVASIVRGGRVKVNRFSQVEGTQNIFALGDLASMAEEKYPNGHPQLAQPAMQQGELLAKN 337
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
+ R+ K ++M+ PF Y+ LGSMAT+GR A+VDL K GF +
Sbjct: 338 MVRMMK--------GQEMK---PFTYKDLGSMATVGRNLAVVDLPFWK------FQGFFA 380
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNW 270
WL W +L +V +NR + +NW
Sbjct: 381 WLTWMFVHLISIVGVKNRLLIFINW 405
>gi|289671392|ref|ZP_06492467.1| NADH dehydrogenase [Xanthomonas campestris pv. musacearum NCPPB
4381]
Length = 417
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 139/267 (52%), Gaps = 23/267 (8%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDD 68
++ L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF +
Sbjct: 146 RAAWLSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPQQARVRLVEAGPRVLPSFPE 205
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L A QL + GV + G V +D+ L D T VP +VW+ GV S L ++L
Sbjct: 206 DLTDKARKQLERLGVEVHTGTPVTHIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLG 264
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ ++ L VP ++F GD + ++ G+ V P +A A++ GK+
Sbjct: 265 VPLDRAGRVLVEPDLSVPGHPEIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH------ 316
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
I KA G R + F Y+ G++ATIGR A+V + + L L+G ++W
Sbjct: 317 -IAKAIGARHRG----QTTPTFRYQDFGNLATIGRMAAIVHVGK------LKLSGIVAWW 365
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTF 274
W +A++ ++ +RNRF V VNWA +
Sbjct: 366 FWLAAHVYFLIGFRNRFVVLVNWAMAY 392
>gi|425748572|ref|ZP_18866558.1| pyridine nucleotide-disulfide oxidoreductase [Acinetobacter
baumannii WC-348]
gi|425491032|gb|EKU57321.1| pyridine nucleotide-disulfide oxidoreductase [Acinetobacter
baumannii WC-348]
Length = 430
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 146/292 (50%), Gaps = 28/292 (9%)
Query: 2 FLAGISEEEKSR-------LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD--YI 52
LA E E+++ L V++GGGPTGVE SG +++ + +D R + D
Sbjct: 141 ILAAFEEAERTKDPILRKALQTFVIIGGGPTGVELSGTIAE-LAKDTLSRDFRLIDPRES 199
Query: 53 HVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLL 111
V LIEA +LS F ++L Y L + GV +V G S+ ++ DG ++P +
Sbjct: 200 RVVLIEAGPRLLSVFPEKLSSYTRQALEQLGVEVVLGTPVTSCSEDGVVYDGKQLPAKTI 259
Query: 112 VWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 171
+W+ GV S + L++ GR+ +D L V ++F +GD + GK V P +
Sbjct: 260 IWAAGVQASPAARWLNVESDRAGRVVVDSNLTVTGHPEIFVIGDTAAVTMGDGKLV-PGI 318
Query: 172 AQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQ 231
A A++QGKY+ ++ N K +L + F Y H G++ATIGR +A+VD+ +
Sbjct: 319 APAAKQQGKYVAKTID----------NRLKGKDLKESFKYYHQGNLATIGRSRAVVDMGK 368
Query: 232 NKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L G L+W W+ ++ ++ ++R VA++W G SR+
Sbjct: 369 ------FQLQGVLAWWFWKLIHIYFLIGVQSRLNVALSWLWNHSVGYRGSRL 414
>gi|188993346|ref|YP_001905356.1| NADH dehydrogenase [Xanthomonas campestris pv. campestris str.
B100]
gi|167735106|emb|CAP53318.1| Putative NADH dehydrogenase [Xanthomonas campestris pv. campestris]
Length = 461
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 139/263 (52%), Gaps = 23/263 (8%)
Query: 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDDRLRH 72
L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF D L
Sbjct: 196 LSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPQQARVRLVEAGPRVLPSFPDDLTD 255
Query: 73 YATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 131
A QL + GV + G V ++D+ L D T VP +VW+ GV S L ++L +P
Sbjct: 256 KARKQLERLGVEVHTGTPVTNIDAFGYQLGD-TFVPARTVVWAAGVAASPLARTLGVPLD 314
Query: 132 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191
GR+ ++ L VP ++F GD + ++ G+ V P +A A++ GK++ + +
Sbjct: 315 RAGRVLVEPDLSVPGHPEIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKHIAKAIRARQR 372
Query: 192 AGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRS 251
G+A A F Y+ G++ATIGR A+V + + L L+G ++W W +
Sbjct: 373 ---GQAAPA--------FHYQDFGNLATIGRMAAIVHVGK------LKLSGIVAWWFWLA 415
Query: 252 AYLTRVVSWRNRFYVAVNWATTF 274
A++ ++ +RNRF V VNWA +
Sbjct: 416 AHVYFLIGFRNRFVVLVNWAMAY 438
>gi|330798742|ref|XP_003287409.1| hypothetical protein DICPUDRAFT_78261 [Dictyostelium purpureum]
gi|325082556|gb|EGC36034.1| hypothetical protein DICPUDRAFT_78261 [Dictyostelium purpureum]
Length = 643
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 162/380 (42%), Gaps = 104/380 (27%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
+ G +EE+ LLH V+VGGGPT VE SG L D+I D+ + + H+ Y +TLI+ A+
Sbjct: 269 VPGTTEEDLKNLLHFVLVGGGPTAVEASGSLHDYIKEDLSKMFPHIAQYSKITLIQSADH 328
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGT---------------- 104
+L+++D ++ Y Q +SG+ ++ +V ++++
Sbjct: 329 LLNTYDLKISEYTEGQFQRSGIEVLTNTRAVEVKKDRIVIMKKAHQRPPGEPLKETENPK 388
Query: 105 ---------EVPYGLLVWSTGVGPSTLVKSL--DLPKSPGGR-IGIDEWLRVPSV--QDV 150
E+P+G+ VWSTGVGP+ LV+S + R I D L+V + ++V
Sbjct: 389 KGPEVSVPVEIPFGMCVWSTGVGPNDLVRSFCNSIETQKNSRAITTDHQLQVIGIKNKNV 448
Query: 151 FAVGDCSGYLESTGKTVLPALAQVAERQG---------KYLFS----------------- 184
+AVGDCS +S + L + A+ G K LFS
Sbjct: 449 YAVGDCSTISQSLLMAKINDLFKEADTNGDNKLSFDEIKVLFSKHSKDYPQLRPYSDGFI 508
Query: 185 -LLNRIGKAGGG-----------------------RANSAKDM--ELGDPFVYRH----- 213
N G A A M L D F +H
Sbjct: 509 EFFNEFDFNKDGFLSLNEFKGLMCKVDSNLTTLPSTAQCANQMGKYLADSFNEKHGKGKD 568
Query: 214 ----------LGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNR 263
LG+ A IG+ A+ D+ + G+ + +++W+ YL + S+RN+
Sbjct: 569 HTVEPFHYKHLGNFAYIGKSNAIADIPDLIKGGGIGV-----YIMWKFVYLEKQFSFRNK 623
Query: 264 FYVAVNWATTFVFGRDISRI 283
F V +W T +FGRDISRI
Sbjct: 624 FLVFTDWIKTGLFGRDISRI 643
>gi|407770523|ref|ZP_11117892.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Thalassospira xiamenensis M-5 = DSM 17429]
gi|407286546|gb|EKF12033.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Thalassospira xiamenensis M-5 = DSM 17429]
Length = 443
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 136/278 (48%), Gaps = 22/278 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSF 66
EE+ RLL+ +VVGGGPTGVE +G +++ + + + + + L E +L +F
Sbjct: 155 EERRRLLNFIVVGGGPTGVEMAGAIAELAKQALSHDFRRIDPRDARIILAEGGPRLLGAF 214
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
+ L Y L K GV + V D+ + + D +P ++W GV L
Sbjct: 215 PEDLSEYTRKSLEKIGVEVRTNQQVSDITAMGAQIGD-EFIPSANVIWGAGVRVDHLADW 273
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
GGR+ ++ L VP +DVF +GD + G TV P +A A++QGKY+
Sbjct: 274 TGRECDRGGRVMVNTDLSVPGYEDVFVIGDAAHVPWRDGMTV-PGIAPAAKQQGKYV--- 329
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
GGR PF YRH G++ATIGR++A++DL GL L G+L+
Sbjct: 330 --------GGRILDHMRSRETPPFAYRHAGNLATIGRHRAVIDL------NGLKLRGWLA 375
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W W A++ ++ R V V W +++F + +R+
Sbjct: 376 WWFWGLAHIYFLIGLRAPALVMVQWVWSYLFRKKGARL 413
>gi|423219318|ref|ZP_17205814.1| hypothetical protein HMPREF1061_02587 [Bacteroides caccae
CL03T12C61]
gi|392626084|gb|EIY20140.1| hypothetical protein HMPREF1061_02587 [Bacteroides caccae
CL03T12C61]
Length = 456
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 140/274 (51%), Gaps = 33/274 (12%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEA 59
+++E+ LL+ V+VGGG TGVE +G LS+ +++ DY +HV L+EA
Sbjct: 155 TKQEQQELLNIVIVGGGATGVEVAGVLSEM------KKFVLPNDYPDMPASLMHVYLVEA 208
Query: 60 N-EILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV 117
+L+ + +A L + GV L+ V D K++L DG+E+ +W +GV
Sbjct: 209 GPRLLAGMSEDSSAHAEKFLREMGVNILLNKRVVDYRDHKVMLEDGSEIATRTFIWVSGV 268
Query: 118 GPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAE 176
T GGRI +DE+ RV +++VFA+GD C + + P LAQVA
Sbjct: 269 TGVTFGNMDASLIGRGGRIKVDEFNRVEGMKNVFAIGDQCVQFSDKDYPNGHPQLAQVAI 328
Query: 177 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
+QG+ L L R+ K E PF YR+LGSMAT+GR +A+ + + K
Sbjct: 329 QQGELLAKNLMRLEKG-----------EEMKPFHYRNLGSMATVGRNRAVAEFSKIKTQ- 376
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
G+ +W++W +L ++ RN+ V +NW
Sbjct: 377 -----GWFAWVLWLVVHLRSILGVRNKVVVLLNW 405
>gi|289664832|ref|ZP_06486413.1| NADH dehydrogenase [Xanthomonas campestris pv. vasculorum NCPPB
702]
Length = 417
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 139/267 (52%), Gaps = 23/267 (8%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDD 68
++ L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF +
Sbjct: 146 RAAWLSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPQQARVRLVEAGPRVLPSFPE 205
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L A QL + GV + G V +D+ L D T VP +VW+ GV S L ++L
Sbjct: 206 DLTDKARKQLERLGVEVHTGTPVTHIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLG 264
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ ++ L VP ++F GD + ++ G+ V P +A A++ GK+
Sbjct: 265 VPLDRAGRVLVEPDLSVPGHPEIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH------ 316
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
I KA G R + F Y+ G++ATIGR A+V + + L L+G ++W
Sbjct: 317 -IAKAIGARHRG----QTTPIFRYQDFGNLATIGRMAAIVHVGK------LKLSGIVAWW 365
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTF 274
W +A++ ++ +RNRF V VNWA +
Sbjct: 366 FWLAAHVYFLIGFRNRFVVLVNWAMAY 392
>gi|444317136|ref|XP_004179225.1| hypothetical protein TBLA_0B08910 [Tetrapisispora blattae CBS 6284]
gi|387512265|emb|CCH59706.1| hypothetical protein TBLA_0B08910 [Tetrapisispora blattae CBS 6284]
Length = 566
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 110/300 (36%), Positives = 161/300 (53%), Gaps = 36/300 (12%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFD 67
EE+ RLL VVVGGGPTGVEF+ EL D+I D+ + + I VTL+EA IL+ FD
Sbjct: 275 EERKRLLSYVVVGGGPTGVEFAAELKDYIDEDLNKWVPGISKEITVTLVEALPNILNMFD 334
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLIL----NDGTEVPYGLLVWSTGVGPSTL 122
L YA K V L ++ +V+ VDS K+ + N+ E+PYGLLVW+TG G +
Sbjct: 335 KSLVQYAEELFRKEKVELQLKSMVQKVDSTKVTMKCDNNEIKELPYGLLVWATGNGQRQV 394
Query: 123 VKSL----DLPKSPGGRIGIDEWLRVPSVQD-VFAVGDCSGYLESTGKTVLPALAQVAER 177
K L D S G + I+E L++ +D +FA+GDC T L A+VA +
Sbjct: 395 TKDLMAKVDKQDSRRGLL-INEKLQLLGHEDSIFAIGDC------TFHPGLVPTAEVAHQ 447
Query: 178 QGKYL------FSLLNRIGKAGGGRANSAKDMEL----------GDPFVYRHLGSMATIG 221
+G+YL L+++ +S+K L D F + H G++A +G
Sbjct: 448 EGEYLADQFKHLYKLDQVKYEISTTKDSSKLTSLNNKLTKLENSADDFKFVHRGALAYLG 507
Query: 222 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
R KA+ DL SK S +G ++L WR AYL+ +S+RNR+ + ++W + GR+ S
Sbjct: 508 REKAIADLSFG-NSKYTS-SGSFTFLFWRFAYLSMCISFRNRYLIFMDWVKMNILGRNSS 565
>gi|428182199|gb|EKX51060.1| hypothetical protein GUITHDRAFT_150973 [Guillardia theta CCMP2712]
Length = 511
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 164/306 (53%), Gaps = 38/306 (12%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+EEE+ RLL+ VVVGGGPTGVEF+ EL+D + D+ + + +K+ + + LIEA +++L
Sbjct: 213 TEEERKRLLNFVVVGGGPTGVEFAAELADLLHEDLTKSFPKLKNDVKIRLIEATDKVLGM 272
Query: 66 FDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQK-LILNDGTE----VPYGLLVWSTGVGP 119
FD ++ + K G+ L VK+V ++ L+ G++ +P ++VW+TG+
Sbjct: 273 FDSKVSAFTAQTFEKEGIEVLANTFVKEVKQKEVLVQKKGSKEIESIPSSVVVWATGIRS 332
Query: 120 STL---------VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA 170
+ VK P++ + D +LRV V+A+GDC+ GK LPA
Sbjct: 333 RPITNKIRECIGVKEQTNPRA----LLTDGFLRVRGADGVYAMGDCATI---DGKP-LPA 384
Query: 171 LAQVAERQGKYLFSLLNRIGKAGGGRA--NSAKDME-------LGDPFVYRHLGSMATIG 221
AQVA ++GKYL LN + A + N+ + M +PF Y H GS+A G
Sbjct: 385 TAQVASQEGKYLSKYLNGLPTAHEDSSVLNAVRKMYWKVAGGFTSEPFEYAHRGSLAYTG 444
Query: 222 RYKALVDLRQNK----ESKGLS-LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 276
A D + +S G+S + G + ++WRS Y++ +S R + +AV+WA VF
Sbjct: 445 GDSAAADFKGAMNGFFDSIGMSVMTGKATNILWRSFYMSEQLSMRTKALLAVDWAKAKVF 504
Query: 277 GRDISR 282
GRD SR
Sbjct: 505 GRDFSR 510
>gi|296808585|ref|XP_002844631.1| external NADH-ubiquinone oxidoreductase 2 [Arthroderma otae CBS
113480]
gi|238844114|gb|EEQ33776.1| external NADH-ubiquinone oxidoreductase 2 [Arthroderma otae CBS
113480]
Length = 573
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 150/336 (44%), Gaps = 80/336 (23%)
Query: 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDRLRH 72
LLH +VG GPTG+E + L DFI D+ + Y +K I +TL + A +LS+FD+ L
Sbjct: 250 LLHFAIVGAGPTGIELAASLCDFIHEDLVKVYPQLKKMIRITLFDVAPTVLSTFDESLSK 309
Query: 73 YATTQLSKSGVRLVRGI--------------VKDVDSQKLIL----NDGTEVPYGLLVWS 114
YA + + GV + ++D + + DG E + VW+
Sbjct: 310 YAMDTMKREGVDVKTNHHIESLRWGEPGAPGPHEMDPRGCLTIKTKEDGEE-GIAMCVWA 368
Query: 115 TG-----------------VGPSTLVKSLDLPKSP----------------GGRIGIDEW 141
TG STL + +P S G + +D+
Sbjct: 369 TGNEMNEFVNDALWKVEEFPASSTLERMDHIPVSSQSAQSAATWTVKKAEKTGALLVDDH 428
Query: 142 LRVP---------SVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKA 192
LRV +++DVFA+GD + LES PA AQ ++ +L LN
Sbjct: 429 LRVQLQSNDGRTVTLKDVFAIGD-NCMLESNSP---PATAQSTNQEAIWLAQCLNA---- 480
Query: 193 GGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS------LAGFLSW 246
A S + F +R+LG +A +G +AL+ Q + +G + L G+ +W
Sbjct: 481 ----AESDTGLSRSPGFSFRNLGMIAYLGHSRALMQFPQTGQDRGKASLLPRGLTGYAAW 536
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
LVW+ AYL+ +SWRNR + +W + + FGRDISR
Sbjct: 537 LVWKGAYLSMSISWRNRLRILYSWVSNWAFGRDISR 572
>gi|423297434|ref|ZP_17275495.1| hypothetical protein HMPREF1070_04160 [Bacteroides ovatus
CL03T12C18]
gi|392667075|gb|EIY60586.1| hypothetical protein HMPREF1070_04160 [Bacteroides ovatus
CL03T12C18]
Length = 458
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 143/269 (53%), Gaps = 23/269 (8%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILS 64
+++E+ LL+ V+VGGG TG+E +G LS+ + Y + +H+ LIEA +L+
Sbjct: 155 TKQEQQELLNIVIVGGGATGIEVAGILSEMKKFVLPNDYPDMPSSLMHIYLIEAGPRLLA 214
Query: 65 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+ +A L + GV L+ V D K++L DGTE+ +W +GV T +
Sbjct: 215 GMSEESSAHAEQFLREMGVNILLNKRVVDYRDHKVVLEDGTEIATRTFIWVSGVTGVT-I 273
Query: 124 KSLDLPK-SPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKY 181
+LD GGRI +D + RV + +VFA+GD C + P LAQVA +QG+
Sbjct: 274 GNLDASLIGRGGRIKVDSFNRVEGMNNVFAIGDQCIQLADENYPNGHPQLAQVAIQQGEL 333
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
L L R+ K ++M+ PF YR+LGSMAT+GR +A+ + + K +
Sbjct: 334 LAKNLVRMEK--------GREMK---PFHYRNLGSMATVGRNRAVAEFSKVK------MQ 376
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
G+ +W++W +L ++ RN+ V +NW
Sbjct: 377 GWFAWVMWLVVHLRSILGVRNKVIVLLNW 405
>gi|336414481|ref|ZP_08594827.1| hypothetical protein HMPREF1017_01935 [Bacteroides ovatus
3_8_47FAA]
gi|335933593|gb|EGM95595.1| hypothetical protein HMPREF1017_01935 [Bacteroides ovatus
3_8_47FAA]
Length = 458
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 143/269 (53%), Gaps = 23/269 (8%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILS 64
+++E+ LL+ V+VGGG TG+E +G LS+ + Y + +H+ LIEA +L+
Sbjct: 155 TKQEQQELLNIVIVGGGATGIEVAGILSEMKKFVLPNDYPDMPSSLMHIYLIEAGPRLLA 214
Query: 65 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+ +A L + GV L+ V D K++L DGTE+ +W +GV T +
Sbjct: 215 GMSEESSAHAEQFLREMGVNILLNKRVVDYRDHKVVLEDGTEIATRTFIWVSGVTGVT-I 273
Query: 124 KSLDLPK-SPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKY 181
+LD GGRI +D + RV + +VFA+GD C + P LAQVA +QG+
Sbjct: 274 GNLDASLIGRGGRIKVDSFNRVEGMNNVFAIGDQCIQLADENYPNGHPQLAQVAIQQGEL 333
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
L L R+ K ++M+ PF YR+LGSMAT+GR +A+ + + K +
Sbjct: 334 LAKNLVRMEK--------GREMK---PFHYRNLGSMATVGRNRAVAEFSKVK------MQ 376
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
G+ +W++W +L ++ RN+ V +NW
Sbjct: 377 GWFAWVMWLVVHLRSILGVRNKVIVLLNW 405
>gi|336406025|ref|ZP_08586687.1| hypothetical protein HMPREF0127_04000 [Bacteroides sp. 1_1_30]
gi|335935571|gb|EGM97520.1| hypothetical protein HMPREF0127_04000 [Bacteroides sp. 1_1_30]
Length = 465
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 143/269 (53%), Gaps = 23/269 (8%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILS 64
+++E+ LL+ V+VGGG TG+E +G LS+ + Y + +H+ LIEA +L+
Sbjct: 155 TKQEQQELLNIVIVGGGATGIEVAGILSEMKKFVLPNDYPDMSSSLMHIYLIEAGPRLLA 214
Query: 65 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+ +A L + GV L+ V D K++L DGTE+ +W +GV T +
Sbjct: 215 GMSEESSAHAEQFLREMGVNILLNKRVVDYRDHKVVLEDGTEIATRTFIWVSGVTGVT-I 273
Query: 124 KSLDLPK-SPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKY 181
+LD GGRI +D + RV + +VFA+GD C + P LAQVA +QG+
Sbjct: 274 GNLDASLIGRGGRIKVDSFNRVEGMNNVFAIGDQCIQLADENYPNGHPQLAQVAIQQGEL 333
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
L L R+ K ++M+ PF YR+LGSMAT+GR +A+ + + K +
Sbjct: 334 LAKNLIRMEK--------GQEMK---PFHYRNLGSMATVGRNRAVAEFSKVK------MQ 376
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
G+ +W++W +L ++ RN+ V +NW
Sbjct: 377 GWFAWVMWLVVHLRSILGVRNKVIVLLNW 405
>gi|410098106|ref|ZP_11293087.1| hypothetical protein HMPREF1076_02265 [Parabacteroides goldsteinii
CL02T12C30]
gi|409224196|gb|EKN17131.1| hypothetical protein HMPREF1076_02265 [Parabacteroides goldsteinii
CL02T12C30]
Length = 429
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 144/287 (50%), Gaps = 33/287 (11%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEA 59
+ EE+ L++ V+VGGG TGVE SG L++ +R+ KDY +H+ L+E
Sbjct: 155 NPEERQALMNVVIVGGGATGVEISGVLAEM------KRFVMPKDYPDLKQSDMHIYLVEG 208
Query: 60 N-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGV 117
+ +L A L GV ++ V D K+IL++ + + LVW +GV
Sbjct: 209 SPRLLGVMSPEASANAEKFLKGMGVNIILNKRVTDYQDGKVILDNNSTIATQTLVWVSGV 268
Query: 118 GPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
+ S GGRI ++E+ ++P + +VFA+GD E P +AQVA +
Sbjct: 269 TATHFEHIDKEALSRGGRITVNEFNQMPGMANVFAIGDVCFQTEEDYPNGHPQVAQVAIQ 328
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
QG L L R+ S K+++ F Y +LG++AT+GR KA+ DL++
Sbjct: 329 QGNLLADNLKRL--------ESGKELK---AFHYLNLGTLATVGRNKAVADLKK------ 371
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA-TTFVFGRDISRI 283
L L GF++W+VW +L ++ +N+ V + W + F + + I I
Sbjct: 372 LKLQGFIAWMVWMGVHLRSILGVKNKLMVLIEWIWSYFTYDQSIRLI 418
>gi|153808632|ref|ZP_01961300.1| hypothetical protein BACCAC_02930 [Bacteroides caccae ATCC 43185]
gi|149128954|gb|EDM20171.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides caccae
ATCC 43185]
Length = 471
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 140/274 (51%), Gaps = 33/274 (12%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEA 59
+++E+ LL+ V+VGGG TGVE +G LS+ +++ DY +HV L+EA
Sbjct: 170 TKQEQQELLNIVIVGGGATGVEVAGVLSEM------KKFVLPNDYPDMPASLMHVYLVEA 223
Query: 60 N-EILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV 117
+L+ + +A L + GV L+ V D K++L DG+E+ +W +GV
Sbjct: 224 GPRLLAGMSEDSSAHAEKFLREMGVNILLNKRVVDYRDHKVMLEDGSEIATRTFIWVSGV 283
Query: 118 GPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAE 176
T GGRI +DE+ RV +++VFA+GD C + + P LAQVA
Sbjct: 284 TGVTFGNMDASLIGRGGRIKVDEFNRVEGMKNVFAIGDQCVQFSDKDYPNGHPQLAQVAI 343
Query: 177 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
+QG+ L L R+ K E PF YR+LGSMAT+GR +A+ + + K
Sbjct: 344 QQGELLAKNLMRLEKG-----------EEMKPFHYRNLGSMATVGRNRAVAEFSKIKTQ- 391
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
G+ +W++W +L ++ RN+ V +NW
Sbjct: 392 -----GWFAWVLWLVVHLRSILGVRNKVVVLLNW 420
>gi|410635465|ref|ZP_11346078.1| NADH dehydrogenase [Glaciecola lipolytica E3]
gi|410144968|dbj|GAC13283.1| NADH dehydrogenase [Glaciecola lipolytica E3]
Length = 432
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 135/279 (48%), Gaps = 25/279 (8%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELS----DFIMRDVRQRYSHVKDYIHVTLIEAN-EILS 64
++ L V++GGGPTGVE +G ++ D + RD R V LIEA +LS
Sbjct: 157 QQEALKTFVIIGGGPTGVELAGTIAELARDTLARDFRNMEPSKS---RVVLIEAAPRLLS 213
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
F ++L Y L K GV ++ G+ S + ++ DG ++ +VW+ GV S +
Sbjct: 214 VFPEKLSEYTRKALEKLGVEVITGMPVTECSGEGVVYDGKQIKANTIVWAAGVKASPAAQ 273
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
L + GR+ +D+ L + D+F +GD + GK V P +A A+++GKY+
Sbjct: 274 WLGVEADRAGRVIVDQHLNITDHLDIFVIGDTAAATMEDGKLV-PGIAPAAKQEGKYVAK 332
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
L+ + K E PF Y H G++ATIG A+VD + L G
Sbjct: 333 LIMK----------RLKGKEDNPPFKYSHQGNLATIGHSLAVVDF------GWIRLKGLF 376
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W +W+ ++ ++ RNR VA++W G SRI
Sbjct: 377 AWWIWKLVHIYFLIGTRNRLSVALSWVWNHSIGYRGSRI 415
>gi|410942335|ref|ZP_11374122.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira noguchii
str. 2006001870]
gi|410782590|gb|EKR71594.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira noguchii
str. 2006001870]
Length = 422
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 149/284 (52%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN- 60
L+G E KS LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA+
Sbjct: 149 LSGDPEVVKS-LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHKIDPALSKITLIEASP 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L +FD L + +L GV ++ G V D++ + + L +G +P ++W+ GV
Sbjct: 208 RLLMTFDPSLGEFTKKRLESRGVEVLTGTRVVDINERGIQL-EGKMIPTQTVIWAAGVQA 266
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+++ +L GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG
Sbjct: 267 NSIASTLGATLDRGGRVIVDEFCNIEGYPEVFVIGDIASYSKGLERP-LPGVSPVAMQQG 325
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+Y+ SL+ N K+ + PF Y GSMATIGR A+ + L
Sbjct: 326 RYVASLIQ----------NDLKNKKR-KPFHYIDKGSMATIGRTDAVAQVGI------LK 368
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G + W W +L V ++N+ + + W +++ R +R+
Sbjct: 369 MKGLVGWFAWLFVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|262409075|ref|ZP_06085620.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|293372650|ref|ZP_06619032.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides ovatus SD
CMC 3f]
gi|294645012|ref|ZP_06722743.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides ovatus SD
CC 2a]
gi|294806975|ref|ZP_06765797.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides
xylanisolvens SD CC 1b]
gi|298483477|ref|ZP_07001654.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Bacteroides sp. D22]
gi|345508268|ref|ZP_08787900.1| hypothetical protein BSAG_02310 [Bacteroides sp. D1]
gi|229444808|gb|EEO50599.1| hypothetical protein BSAG_02310 [Bacteroides sp. D1]
gi|262353286|gb|EEZ02381.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292632459|gb|EFF51055.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides ovatus SD
CMC 3f]
gi|292639661|gb|EFF57948.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides ovatus SD
CC 2a]
gi|294445810|gb|EFG14455.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides
xylanisolvens SD CC 1b]
gi|295087899|emb|CBK69422.1| NADH dehydrogenase, FAD-containing subunit [Bacteroides
xylanisolvens XB1A]
gi|298270425|gb|EFI12009.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Bacteroides sp. D22]
Length = 465
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 145/275 (52%), Gaps = 35/275 (12%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEA 59
+++E+ LL+ V+VGGG TG+E +G LS+ +++ DY +H+ LIEA
Sbjct: 155 TKQEQQELLNIVIVGGGATGIEVAGILSEM------KKFVLPNDYPDMSSSLMHIYLIEA 208
Query: 60 N-EILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV 117
+L+ + +A L + GV L+ V D K++L DGTE+ +W +GV
Sbjct: 209 GPRLLAGMSEESSAHAEQFLREMGVNILLNKRVVDYRDHKVVLEDGTEIATRTFIWVSGV 268
Query: 118 GPSTLVKSLDLPK-SPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVA 175
T + +LD GGRI +D + RV + +VFA+GD C + P LAQVA
Sbjct: 269 TGVT-IGNLDASLIGRGGRIKVDSFNRVEGMNNVFAIGDQCIQLADENYPNGHPQLAQVA 327
Query: 176 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 235
+QG+ L L R+ K ++M+ PF YR+LGSMAT+GR +A+ + + K
Sbjct: 328 IQQGELLAKNLIRMEK--------GQEMK---PFHYRNLGSMATVGRNRAVAEFSKVK-- 374
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+ G+ +W++W +L ++ RN+ V +NW
Sbjct: 375 ----MQGWFAWVMWLVVHLRSILGVRNKVIVLLNW 405
>gi|423216046|ref|ZP_17202572.1| hypothetical protein HMPREF1074_04104 [Bacteroides xylanisolvens
CL03T12C04]
gi|392691232|gb|EIY84480.1| hypothetical protein HMPREF1074_04104 [Bacteroides xylanisolvens
CL03T12C04]
Length = 465
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 143/269 (53%), Gaps = 23/269 (8%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILS 64
+++E+ LL+ V+VGGG TG+E +G LS+ + Y + +H+ LIEA +L+
Sbjct: 155 TKQEQQELLNIVIVGGGATGIEVAGILSEMKKFVLPNDYPDMPSSLMHIYLIEAGPRLLA 214
Query: 65 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+ +A L + GV L+ V D K++L DGTE+ +W +GV T +
Sbjct: 215 GMSEESSAHAEQFLREMGVNILLNKRVVDYRDHKVVLEDGTEIATRTFIWVSGVTGVT-I 273
Query: 124 KSLDLPK-SPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKY 181
+LD GGRI +D + RV + +VFA+GD C + P LAQVA +QG+
Sbjct: 274 GNLDASLIGRGGRIKVDSFNRVEGMNNVFAIGDQCIQLADENYPNGHPQLAQVAIQQGEL 333
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
L L R+ K ++M+ PF YR+LGSMAT+GR +A+ + + K +
Sbjct: 334 LAKNLIRMEK--------GQEMK---PFHYRNLGSMATVGRNRAVAEFSKVK------MQ 376
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
G+ +W++W +L ++ RN+ V +NW
Sbjct: 377 GWFAWVMWLVVHLRSILGVRNKVIVLLNW 405
>gi|189912869|ref|YP_001964758.1| NADH dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|189913194|ref|YP_001964423.1| NADH dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
gi|167777545|gb|ABZ95845.1| NADH dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167781262|gb|ABZ99559.1| NADH dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 423
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 142/282 (50%), Gaps = 23/282 (8%)
Query: 6 ISEEEKSR-LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EI 62
I++ E S+ L+H V++GGGPTGVE +G +++ +R+ + ++ VTLIEA ++
Sbjct: 149 IADYETSKSLMHYVIIGGGPTGVELAGSIAELSHNIIRKDFRNIDSGMTKVTLIEAGPKL 208
Query: 63 LSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPST 121
L++F + + +L GV L V D+ ++L D T + ++W+ GV S
Sbjct: 209 LNAFSESSSQFTKKKLESRGVEVLTNSPVLDITDSGVVLKDRT-IESKTIIWAAGVEGSD 267
Query: 122 LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 181
L K + K RI +DE+ R DVF +GD + + + + LP ++ VA +QG+Y
Sbjct: 268 LAKKTSINKDKANRILVDEYCRSIDHNDVFVIGDAANFSKGLNRP-LPGVSPVAMQQGRY 326
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
+ L+ I K G+ PF Y G+MATIGR A+ E L L
Sbjct: 327 VAKLIQSIDK---GKKTI--------PFQYFDKGNMATIGRTDAVA------EFGALRLK 369
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G + W W +L V ++N+ ++W +++ R SR+
Sbjct: 370 GIIGWFGWLFVHLVYQVGFKNKMSTLISWVWSYLTFRAGSRL 411
>gi|256420722|ref|YP_003121375.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Chitinophaga pinensis DSM 2588]
gi|256035630|gb|ACU59174.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Chitinophaga pinensis DSM 2588]
Length = 438
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 138/269 (51%), Gaps = 37/269 (13%)
Query: 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIE-ANEILSSF 66
L V+VGGGPTGVE +G ++ ++Y KDY +++ LIE +N IL+
Sbjct: 164 LSFVMVGGGPTGVELAGAFAEL------RKYIMPKDYPELPVSLMNIYLIEGSNRILNGM 217
Query: 67 DDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
+ + L K GV L +VK+ D + L+L++G + L+W+ GV V
Sbjct: 218 SEHSSQKSLESLQKLGVNVLCNAVVKEYDGKTLVLSNGETLSTQSLLWAAGVKG---VPV 274
Query: 126 LDLPKS---PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTG-KTVLPALAQVAERQGKY 181
+P P GRI ++E+ V Q+++A+GD + + P +AQVA +QG
Sbjct: 275 AGIPAEVILPNGRIQVNEFNLVNGTQNIYAIGDIAQMVNDPKFPRGYPMVAQVAIQQGAN 334
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
L L + K+ G S K PF Y+ LGSMATIGR A+ E G+ L+
Sbjct: 335 LAENLLKTIKSSG---RSPK------PFKYKDLGSMATIGRNHAVA------EFAGMKLS 379
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
GF++W+VW + +L ++ +RN+ V NW
Sbjct: 380 GFMAWMVWMAVHLMSLLGFRNKLVVFSNW 408
>gi|403167292|ref|XP_003327097.2| NADH dehydrogenase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375166949|gb|EFP82678.2| NADH dehydrogenase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 587
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 151/303 (49%), Gaps = 36/303 (11%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
S E RLLH VVVGGGPTGVE++ EL DF++ D+ + Y + + +TLIEA +L
Sbjct: 293 SPSEVDRLLHMVVVGGGPTGVEYAAELHDFLVDDLSRWYPEIAGKVKITLIEALPNVLPM 352
Query: 66 FDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPS 120
F +L Y T + + L + +VK V + + D E+PYGLLVW+TG
Sbjct: 353 FSKQLIDYTTQTFMSNRINVLTKTMVKQVHPKSITALDENKQLMEIPYGLLVWATGNTSR 412
Query: 121 TLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
L + L LP+ R G +D+ L V ++A+GDC+ T AQ A
Sbjct: 413 ELTRQLMAALPEHQTQRRGLLVDDDLSVLGADGIYALGDCTA-------TSYAPTAQAAS 465
Query: 177 RQGKYL---FSLLNR---------IGKAGGGRANSAKDMELGD-----PFVYRHLGSMAT 219
+QG+YL F L+ + + K G ++ + F Y H GS+A
Sbjct: 466 QQGQYLARRFGLMAKREKLENQLVLAKQNGNLEEQEATLKSINRTNLKEFKYSHQGSLAY 525
Query: 220 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
IG KA+ DL + ++ G ++ WRSAY++ S+RNR V +W +FGRD
Sbjct: 526 IGSDKAIADL--PFFNGNIATGGVATYFFWRSAYVSMAFSFRNRVLVCTDWVKVKLFGRD 583
Query: 280 ISR 282
+SR
Sbjct: 584 VSR 586
>gi|107102095|ref|ZP_01366013.1| hypothetical protein PaerPA_01003144 [Pseudomonas aeruginosa PACS2]
Length = 356
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 139/282 (49%), Gaps = 29/282 (10%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELS----DFIMRDVRQRYSHVKDYIHVTLIEAN-EIL 63
++++ L V++GGGPTGVE +G ++ D + RD R S V LIEA +L
Sbjct: 77 QQRAALQTFVIIGGGPTGVELAGTIAELARDTLARDFR---SIDPSTSRVVLIEAGPRLL 133
Query: 64 SSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
S F + L Y L K GV +V G S ++ G + +VW+ GV S
Sbjct: 134 SVFPEDLSAYTRQALEKLGVEVVLGTPVTECSADGVVYGGKPLSAKTIVWAAGVQASPAA 193
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
+ L GR+ + L V +VFA+GD + + GK V P +A A++QGKY+
Sbjct: 194 RWLGAASDRAGRVVVGPDLTVAGRPEVFAIGDTASCTMADGKPV-PGIAPAAKQQGKYVA 252
Query: 184 SLLNR--IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
+L+ R GK G PF YRH G++ATIGR A++D+ + K L
Sbjct: 253 NLIGRRLKGKPADG------------PFKYRHQGNLATIGRSLAVIDMGRVK------LR 294
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G +W +W+ A++ ++ RNR VA++W G SRI
Sbjct: 295 GAFAWWIWKLAHIYFLIGTRNRLSVALSWVWNHSIGYRGSRI 336
>gi|356524746|ref|XP_003530989.1| PREDICTED: external NADH-ubiquinone oxidoreductase 2,
mitochondrial-like [Glycine max]
Length = 580
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 99/165 (60%), Gaps = 10/165 (6%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L +SEEEK R+LH +VGGGPTGVEF+ L D++ D+ Y +KD + +TL+EA +
Sbjct: 208 LPSVSEEEKKRILHFAIVGGGPTGVEFAASLHDYVTEDLVNIYPGIKDLVKITLLEAGDH 267
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLI----LNDG---TEVPYGLLVWS 114
ILS FD R+ +A + + G+ + G + SQK I + +G T +PYG+ VWS
Sbjct: 268 ILSMFDKRITAFAEEKFGRDGIDVKTGSMVVKVSQKEISTKEMKNGGAITTIPYGMAVWS 327
Query: 115 TGVGPSTLVKSL--DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS 157
TG+G ++ + ++ I DEWLRV + +V+A+GDC+
Sbjct: 328 TGIGTRPFIRDFMSQIGQTNRRAIATDEWLRVEATNNVYALGDCA 372
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 168 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 223
LPA AQVA +QG YL NR+ + + G PF Y+HLG A +G
Sbjct: 466 LPATAQVASQQGTYLAKCFNRMEECEKNPEGPIRFRGEGRHRFKPFRYKHLGQFAPLGGE 525
Query: 224 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ L + S G S WL W S Y ++ VSWR R V +W F+FGRD S+I
Sbjct: 526 QTAAQLPGDWVSIGHSS----QWL-WYSVYASKQVSWRTRALVVSDWTRRFIFGRDSSQI 580
>gi|384417623|ref|YP_005626983.1| NADH dehydrogenase [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353460538|gb|AEQ94817.1| NADH dehydrogenase [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 324
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 138/264 (52%), Gaps = 23/264 (8%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDD 68
++ L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF +
Sbjct: 53 RAAWLSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPQQARVRLVEAGPRVLPSFPE 112
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L A TQL + GV + G V +D+ L D T VP +VW+ GV S L ++LD
Sbjct: 113 DLTDNARTQLQRLGVEVHTGTPVTHIDAVGDQLGD-TFVPARTVVWAAGVAASPLARTLD 171
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ ++ L VP ++F GD + ++ G+ V P +A A++ GK++ +
Sbjct: 172 VPLDRAGRVLVEADLSVPGHPEIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKHIAEAIR 229
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ + F Y+ G++ATIGR A+V + + L L+G ++W
Sbjct: 230 ARHRG-----------QTAPAFRYQDYGNLATIGRMAAIVHVGK------LKLSGIVAWW 272
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWA 271
W +A++ ++ +RNRF V VNWA
Sbjct: 273 FWLAAHVYFLIGFRNRFVVLVNWA 296
>gi|383113593|ref|ZP_09934365.1| hypothetical protein BSGG_3288 [Bacteroides sp. D2]
gi|313695753|gb|EFS32588.1| hypothetical protein BSGG_3288 [Bacteroides sp. D2]
Length = 458
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 143/274 (52%), Gaps = 33/274 (12%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEA 59
+++E+ L++ V+VGGG TG+E +G LS+ +++ KDY +H+ LIEA
Sbjct: 155 TKQEQQELMNIVIVGGGATGIEVAGILSEM------KKFVLPKDYPDMPSSLMHIYLIEA 208
Query: 60 N-EILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV 117
+L+ + +A L + GV L+ V D K++L DGTE+ +W +GV
Sbjct: 209 GPRLLAGMSEDSSAHAEQFLREMGVNILLNKRVVDYRDHKVVLEDGTEIATRTFIWVSGV 268
Query: 118 GPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAE 176
T+ GGRI +D + RV + +VFA+GD C + P LAQVA
Sbjct: 269 TGVTIGNMDPSLIGRGGRIKVDSFNRVEGMSNVFAIGDQCIQVADEDYPNGHPQLAQVAI 328
Query: 177 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
+QG+ L L R+ K ++M+ PF YR+LGSMAT+GR +A+ + + K
Sbjct: 329 QQGELLAKNLIRMEK--------GREMK---PFHYRNLGSMATVGRNRAVAEFSKVK--- 374
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+ G+ +W++W +L ++ RN+ V +NW
Sbjct: 375 ---MQGWFAWVMWLVVHLRSILGVRNKVIVLLNW 405
>gi|86141293|ref|ZP_01059839.1| putative NADH dehydrogenase [Leeuwenhoekiella blandensis MED217]
gi|85831852|gb|EAQ50307.1| putative NADH dehydrogenase [Leeuwenhoekiella blandensis MED217]
Length = 422
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 132/265 (49%), Gaps = 19/265 (7%)
Query: 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEAN-EILSSFDDRLRH 72
L+ V+ GGGPTGVE SG ++ +R+ + + + LI E+LS ++ +
Sbjct: 156 LNMVIAGGGPTGVEISGVFAELRNHTIRKEFPELIGSGSRIYLINGGGELLSPMSEKSQK 215
Query: 73 YATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 131
Y QL GV L+ V D D +K+++ DG+ + L+W+TGV D
Sbjct: 216 YTLEQLQSMGVEVLLNTRVVDFDGEKVLMKDGSHIYSKNLIWATGVTGFRFKGIPDTSYV 275
Query: 132 PGGRIGIDEWLRVPSVQDVFAVGDCS-GYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 190
G R+ +DE R+ +++V+A+GD S + T P LAQVA +QG+ L R+
Sbjct: 276 RGNRLKVDEVNRIEGLKNVYAIGDSSLSVSDPKFPTGHPQLAQVAMQQGRVLAKNFKRM- 334
Query: 191 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 250
K+ L PF Y GSMA IG KA+ D+ + K + GF++W +W
Sbjct: 335 ---------VKNKPL-KPFTYLDKGSMAIIGSNKAVADMPKPK----MHFKGFMAWFIWL 380
Query: 251 SAYLTRVVSWRNRFYVAVNWATTFV 275
+L ++ +RNR NW+T ++
Sbjct: 381 FVHLFALIDYRNRVRTFYNWSTEYL 405
>gi|374290259|ref|YP_005037312.1| NADH dehydrogenase (quinone) [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
gi|358377051|gb|AEU09239.1| NADH dehydrogenase (quinone) [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
Length = 424
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 144/277 (51%), Gaps = 30/277 (10%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEANE-ILS 64
+ +E+ +L+ V+VGGGPTGVE +G L++ ++ Y + ++++ L++A+ +L
Sbjct: 154 NSKEREKLITFVIVGGGPTGVELAGSLAEMKKYILQNDYPDLNIQHMNIHLLQASSRLLD 213
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
++ A L + GV + + +VKD DS+ + ++ ++ ++W+ GV + +
Sbjct: 214 GMSEKSSKQAFKNLKELGVNIWLNCLVKDYDSEIIFMDKNRKIESANVIWAAGVKGAIIK 273
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTG-KTVLPALAQVAERQGKYL 182
+ G RI +D +L+ ++FA+GD + +++ P AQ A +QGK+L
Sbjct: 274 GFIKEDIMSGQRILVDNYLKTLKYPNIFAIGDVAYIIKNKYYPNGHPMTAQPAIQQGKWL 333
Query: 183 -----FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
+ LLN ++G PF Y++LG+MATIGR KA+ D K
Sbjct: 334 AKNFNYFLLNN---------------KIGPPFKYKNLGNMATIGRNKAVCDFTYFK---- 374
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
L GFL+W++W +L +V +RN+ V NW +
Sbjct: 375 --LKGFLAWIIWMFVHLISLVGFRNKIIVLTNWIIQY 409
>gi|323355847|gb|EGA87660.1| Nde2p [Saccharomyces cerevisiae VL3]
Length = 545
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 161/302 (53%), Gaps = 34/302 (11%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILS 64
+++ E+ RLL VVVGGGPTGVEF+ EL D+I +D+R+ + + V LIEA IL+
Sbjct: 251 VNDPERKRLLTFVVVGGGPTGVEFAAELQDYINQDLRKWMPDLSKEMKVILIEALPNILN 310
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL-ILNDG---TEVPYGLLVWSTGVGP 119
FD L YA ++ + L V VK V+ + L +G T++ YG+LVW+TG P
Sbjct: 311 MFDKTLIKYAEDLFARDEIDLQVNTAVKVVEPTYIRTLQNGQTNTDIEYGMLVWATGNEP 370
Query: 120 STLVKSL--DLPKSPGGR-IGIDEWLRVP-SVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
K+L +P+ R + I++ L + S ++A+GDC+ + TG P AQVA
Sbjct: 371 IDFSKTLMSRIPEQTNRRGLLINDKLELLGSENSIYAIGDCTAH---TG--FFPT-AQVA 424
Query: 176 ERQGKYLFSLLNR---IGKAGGGRANSAKDMELG-------------DPFVYRHLGSMAT 219
++G+YL +L++ I + NS + + D F Y+H+G++A
Sbjct: 425 HQEGEYLAKILDKKLQIEQLEWDMLNSTDETXVSRLQKEVNLRKSKLDKFNYKHMGALAY 484
Query: 220 IGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
IG A+ DL S L G ++L W+SAYL +S RNR +A++W + GRD
Sbjct: 485 IGSETAIADLHMGDSS--YQLKGMFAFLFWKSAYLAMCLSIRNRILIAMDWTKVYFLGRD 542
Query: 280 IS 281
S
Sbjct: 543 SS 544
>gi|134095227|ref|YP_001100302.1| NADH dehydrogenase transmembrane protein [Herminiimonas
arsenicoxydans]
gi|133739130|emb|CAL62179.1| NADH dehydrogenase [Herminiimonas arsenicoxydans]
Length = 435
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 139/282 (49%), Gaps = 29/282 (10%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELS----DFIMRDVRQRYSHVKDYIHVTLIEAN-EIL 63
++++ L V++GGGPTGVE +G ++ D + RD R S V LIEA +L
Sbjct: 156 QQRAALQTFVIIGGGPTGVELAGTIAELARDTLARDFR---SIDPSTSRVVLIEAGPRLL 212
Query: 64 SSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
S F + L Y L K GV +V G S ++ G + +VW+ GV S
Sbjct: 213 SVFPEDLSAYTRQALEKLGVEVVLGTPVTECSADGVVYGGKPLSAKTIVWAAGVQASPAA 272
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
+ L GR+ + L V +VFA+GD + + GK V P +A A++QGKY+
Sbjct: 273 RWLGAASDRAGRVVVGPDLTVAGRPEVFAIGDTASCTMADGKPV-PGIAPAAKQQGKYVA 331
Query: 184 SLLNR--IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
+L+ R GK G PF YRH G++ATIGR A++D+ + K L
Sbjct: 332 NLIGRRLKGKPADG------------PFKYRHQGNLATIGRSLAVIDMGRVK------LR 373
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G +W +W+ A++ ++ RNR VA++W G SRI
Sbjct: 374 GAFAWWIWKLAHIYFLIGTRNRLSVALSWVWNHSIGYRGSRI 415
>gi|299146767|ref|ZP_07039835.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Bacteroides sp. 3_1_23]
gi|298517258|gb|EFI41139.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Bacteroides sp. 3_1_23]
Length = 458
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 143/269 (53%), Gaps = 23/269 (8%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILS 64
+++E+ LL+ V+VGGG TG+E +G LS+ + Y + +H+ LIEA +L+
Sbjct: 155 TKQEQQELLNIVIVGGGATGIEVAGILSEMKKFVLPNDYPDMPSSLMHIYLIEAGPRLLA 214
Query: 65 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+ +A L + GV L+ V D K++L DGTE+ +W +GV T +
Sbjct: 215 GMSEESSAHAEQFLREMGVNILLNKRVVDYRDHKVVLEDGTEIATRTFIWVSGVTGVT-I 273
Query: 124 KSLDLPK-SPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKY 181
+LD GGRI +D + RV + +VFA+GD C + P LAQVA +QG+
Sbjct: 274 GNLDASLIGRGGRIKVDSFNRVEGMNNVFAIGDQCIQVADEDYPNGHPQLAQVAIQQGEL 333
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
L L R+ K ++M+ PF YR+LGSMAT+GR +A+ + + K +
Sbjct: 334 LAKNLVRMEK--------GREMK---PFHYRNLGSMATVGRNRAVAEFSKVK------MQ 376
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
G+ +W++W +L ++ RN+ V +NW
Sbjct: 377 GWFAWVMWLVVHLRSILGVRNKVIVLLNW 405
>gi|160886268|ref|ZP_02067271.1| hypothetical protein BACOVA_04275 [Bacteroides ovatus ATCC 8483]
gi|423289443|ref|ZP_17268293.1| hypothetical protein HMPREF1069_03336 [Bacteroides ovatus
CL02T12C04]
gi|156108153|gb|EDO09898.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides ovatus
ATCC 8483]
gi|392667154|gb|EIY60664.1| hypothetical protein HMPREF1069_03336 [Bacteroides ovatus
CL02T12C04]
Length = 458
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 143/269 (53%), Gaps = 23/269 (8%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILS 64
+++E+ LL+ V+VGGG TG+E +G LS+ + Y + +H+ LIEA +L+
Sbjct: 155 TKQEQQELLNIVIVGGGATGIEVAGILSEMKKFVLPNDYPDMPSSLMHIYLIEAGPRLLA 214
Query: 65 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+ +A L + GV L+ V D K++L DGTE+ +W +GV T +
Sbjct: 215 GMSEESSAHAEQFLREMGVNILLNKRVVDYRDHKVVLEDGTEIATRTFIWVSGVTGVT-I 273
Query: 124 KSLDLPK-SPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKY 181
+LD GGRI +D + RV + +VFA+GD C + P LAQVA +QG+
Sbjct: 274 GNLDASLIGRGGRIKVDSFNRVEGMNNVFAIGDQCIQVADEDYPNGHPQLAQVAIQQGEL 333
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
L L R+ K ++M+ PF YR+LGSMAT+GR +A+ + + K +
Sbjct: 334 LAKNLVRMEK--------GREMK---PFHYRNLGSMATVGRNRAVAEFSKVK------MQ 376
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
G+ +W++W +L ++ RN+ V +NW
Sbjct: 377 GWFAWVMWLVVHLRSILGVRNKVIVLLNW 405
>gi|254444543|ref|ZP_05058019.1| cyclic nucleotide-binding domain protein [Verrucomicrobiae
bacterium DG1235]
gi|198258851|gb|EDY83159.1| cyclic nucleotide-binding domain protein [Verrucomicrobiae
bacterium DG1235]
Length = 673
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 142/279 (50%), Gaps = 25/279 (8%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSF 66
E + RLL V+VGGG +GVE +G+L D + R + + Y +V + I + L+ + + +L +
Sbjct: 164 EIRRRLLTFVIVGGGYSGVETAGQLID-LGRAINKHYKNVDWEDIRLVLVHSKDHLLPTL 222
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
L Y +LSK GV ++ K V + K+ L+DGTE+ ++ + G P L+
Sbjct: 223 HRNLGDYTAEKLSKRGVEMILTRRAKAVTANKIYLDDGTEIDTNTVICTVGNAPHPLILG 282
Query: 126 LDLPKS---PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
LD + GR+ + + L P + ++A GDC+ + G T P AQ A R+G L
Sbjct: 283 LDGIQGVELDRGRLKVGQDLAAPGIDWLWAAGDCASIPQDDGNTC-PPTAQFAMREGLLL 341
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
GK R ++ PF ++ +G +A+IG A+ ++ KG+ +G
Sbjct: 342 -------GKNLAARIQNSST----KPFRFKAIGELASIGHLSAVAEI------KGMRFSG 384
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
F +W +WRS YL ++ S + V V+W F RDI+
Sbjct: 385 FFAWWMWRSIYLMKLPSLERKIRVMVDWTLELFFPRDIN 423
>gi|357058792|ref|ZP_09119638.1| hypothetical protein HMPREF9334_01355 [Selenomonas infelix ATCC
43532]
gi|355373138|gb|EHG20459.1| hypothetical protein HMPREF9334_01355 [Selenomonas infelix ATCC
43532]
Length = 428
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 138/283 (48%), Gaps = 22/283 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--IHVTLIEA-NEILSS 65
E + R L+ V+VGGG TG+E +G L + I ++ ++ H D+ + VTL+EA +L
Sbjct: 154 EARRRHLNFVIVGGGATGIEMAGALMELI--EIFKKEFHTIDFSEVSVTLLEAMGSVLPM 211
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
L+ + L K GV + + V + D L LN+G +P ++W+ GV +K
Sbjct: 212 VPPDLQQHTIDVLRKKGVDVRLNTAVTEYDGNDLTLNNGEVIPTKTVIWAAGVRAQDFIK 271
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG----K 180
GR+ ++E L V VFA+GDC+ + + LP +A VA ++ K
Sbjct: 272 DCGGEVDRAGRVIVEENLLVKGSDRVFAIGDCANFQHGDLQRPLPTVAPVATQEAMQVKK 331
Query: 181 YLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 240
+ +L+ + K + + FVY LG+MATIG+ +A+++ L
Sbjct: 332 NIMALI------------AGKTPDQLEKFVYHDLGAMATIGKGEAVMNGPMPVLGFNLKA 379
Query: 241 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+GF +W W +L R+ F V+V W F FG ++RI
Sbjct: 380 SGFFAWFAWMLVHLVRLAGKYADFTVSVKWIWNFFFGTRLARI 422
>gi|325928674|ref|ZP_08189849.1| NADH dehydrogenase, FAD-containing subunit [Xanthomonas perforans
91-118]
gi|346726596|ref|YP_004853265.1| NADH dehydrogenase [Xanthomonas axonopodis pv. citrumelo F1]
gi|325540952|gb|EGD12519.1| NADH dehydrogenase, FAD-containing subunit [Xanthomonas perforans
91-118]
gi|346651343|gb|AEO43967.1| NADH dehydrogenase [Xanthomonas axonopodis pv. citrumelo F1]
Length = 430
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 136/263 (51%), Gaps = 23/263 (8%)
Query: 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDDRLRH 72
L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF + L
Sbjct: 163 LSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPRQARVRLVEAGPRVLPSFPEDLTA 222
Query: 73 YATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 131
A QL + GV + G V +D+ L D T VP +VW+ GV S L ++L +P
Sbjct: 223 KARKQLERLGVEVHTGTPVTQIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLGVPLD 281
Query: 132 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191
GR+ ++ L VP D+F GD + ++ G+ V P +A A++ GK+ I K
Sbjct: 282 RAGRVLVEADLSVPGHPDIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH-------IAK 332
Query: 192 AGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRS 251
A R + F Y+ G++ATIGR A+V + + L L+G ++W W +
Sbjct: 333 AIRARQRG----QTAPAFRYQDYGNLATIGRMAAIVHVGK------LKLSGIVAWWFWLA 382
Query: 252 AYLTRVVSWRNRFYVAVNWATTF 274
A++ ++ +RNRF V VNWA +
Sbjct: 383 AHVYFLIGFRNRFVVLVNWAMAY 405
>gi|309792243|ref|ZP_07686715.1| AD-dependent pyridine nucleotide-disulfide oxidoreductase
[Oscillochloris trichoides DG-6]
gi|308225784|gb|EFO79540.1| AD-dependent pyridine nucleotide-disulfide oxidoreductase
[Oscillochloris trichoides DG6]
Length = 452
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 156/296 (52%), Gaps = 38/296 (12%)
Query: 2 FLAGISEEE---KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY------- 51
F +SE++ + RL+ V+VGGGPTGVE +G + + R+ V+DY
Sbjct: 168 FEYAVSEQDPAIRQRLMTLVIVGGGPTGVELAGAFIELV------RHVLVRDYPMLDISE 221
Query: 52 IHVTLIEANE-ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYG 109
V L+EA+E IL+ F + LR +L K GV + ++ +V +VD+Q + DG+ + G
Sbjct: 222 ARVVLVEASEHILAVFPEGLRRSGLRRLEKMGVEVRLKTMVANVDAQGVTFGDGSRLETG 281
Query: 110 LLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTV-L 168
++W+ GV + L SL + + GGR+ + L + + DVF +GD + YL++ V
Sbjct: 282 SVIWAAGVRGAHLGDSLGMKLARGGRVPVQPTLNLATNPDVFVIGDMA-YLDTYKPGVPY 340
Query: 169 PALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVD 228
P +A VA + + + N + K R + F Y G+MATIGR A++D
Sbjct: 341 PMIAPVAVQMAE--LAAHNILAKT---RRRPLRS------FHYFDKGNMATIGRRGAVMD 389
Query: 229 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA-TTFVFGRDISRI 283
+ G+ L+GFL+W+ W +L +V +RNR V +NWA + F + R + I
Sbjct: 390 ------AFGVRLSGFLAWMGWLLVHLMFLVGFRNRVIVLLNWAYSYFTYDRGVRLI 439
>gi|294626533|ref|ZP_06705132.1| NADH dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
gi|292599223|gb|EFF43361.1| NADH dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
Length = 430
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 140/272 (51%), Gaps = 23/272 (8%)
Query: 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDDRLRH 72
L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF + L
Sbjct: 163 LSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPRQARVRLVEAGPRVLPSFPEDLTA 222
Query: 73 YATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 131
A QL + GV + G V +D+ L D T VP +VW+ GV S L ++L +P
Sbjct: 223 KARKQLERLGVEVHTGTPVTQIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLGVPLD 281
Query: 132 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191
GR+ ++ L VP D+F GD + ++ G+ V P +A A++ GK+ I K
Sbjct: 282 RAGRVLVEANLSVPGHPDIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH-------IAK 332
Query: 192 AGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRS 251
A R + F Y+ G++ATIGR A+V + + L L+G ++W W +
Sbjct: 333 AIRARHRG----QTAPAFRYQDYGNLATIGRMAAIVHVGK------LKLSGVVAWWFWLA 382
Query: 252 AYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
A++ ++ +RNRF V VNWA + + +RI
Sbjct: 383 AHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 414
>gi|418515545|ref|ZP_13081725.1| NADH dehydrogenase [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
gi|418523025|ref|ZP_13089052.1| NADH dehydrogenase [Xanthomonas axonopodis pv. malvacearum str.
GSPB2388]
gi|410700500|gb|EKQ59053.1| NADH dehydrogenase [Xanthomonas axonopodis pv. malvacearum str.
GSPB2388]
gi|410707843|gb|EKQ66293.1| NADH dehydrogenase [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
Length = 430
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 136/263 (51%), Gaps = 23/263 (8%)
Query: 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDDRLRH 72
L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF + L
Sbjct: 163 LSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPRQARVRLVEAGPRVLPSFPEDLTA 222
Query: 73 YATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 131
A QL + GV + G V +D+ L D T VP +VW+ GV S L ++L +P
Sbjct: 223 KARKQLERLGVEVHTGTPVTQIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLGVPLD 281
Query: 132 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191
GR+ ++ L VP D+F GD + ++ G+ V P +A A++ GK+ I K
Sbjct: 282 RAGRVLVEADLSVPGHPDIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH-------IAK 332
Query: 192 AGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRS 251
A R + F Y+ G++ATIGR A+V + + L L+G ++W W +
Sbjct: 333 AIRARQRG----QTAPAFRYQDYGNLATIGRMAAIVHVGK------LKLSGVVAWWFWLA 382
Query: 252 AYLTRVVSWRNRFYVAVNWATTF 274
A++ ++ +RNRF V VNWA +
Sbjct: 383 AHVYFLIGFRNRFVVLVNWAMAY 405
>gi|399925835|ref|ZP_10783193.1| NADH dehydrogenase [Myroides injenensis M09-0166]
Length = 434
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 137/276 (49%), Gaps = 34/276 (12%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIE-ANE 61
E+ L++ VVVG GPTGVE +G L++ +++ KDY + + +I+ A++
Sbjct: 156 EQKALMNFVVVGAGPTGVELAGALAEM------RKHVLPKDYPDLDFRKMEINVIQGADK 209
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120
+L + + A L K GV + G IV D D ++I G E ++W+ GV +
Sbjct: 210 VLDAMSSKSSKAAEKFLRKLGVNVWLGEIVVDYDGNRVITKSGKEFKADTVIWTAGVMGA 269
Query: 121 TLVKSLDLPK-SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
V+ D G RI ++E+ +V DVFA+GD + + P +AQ A +QG
Sbjct: 270 P-VEGFDATVIQRGNRIKVNEYNQVEGFTDVFAIGDVATMMTEKTPMGHPMMAQPAIQQG 328
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
L L R+ + K M+ PFVYR GSMATIGR KA+VDL +
Sbjct: 329 DLLAKNLVRLAEG--------KPMK---PFVYRDKGSMATIGRNKAVVDLPK------FH 371
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
GF +W VW +L ++ +RN+ V NW +V
Sbjct: 372 FNGFFAWFVWMFVHLMSLIGFRNKLVVFWNWLYNYV 407
>gi|388505494|gb|AFK40813.1| unknown [Lotus japonicus]
Length = 574
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 97/165 (58%), Gaps = 10/165 (6%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L ISEEE+ R+LH +VGGGPTGVEF+ L DF+ D+ + Y KD + +TL+EA +
Sbjct: 202 LPSISEEERKRILHFAIVGGGPTGVEFAASLHDFVNEDLVKLYPKAKDLVKITLLEAGDH 261
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVD---SQKLILNDG--TEVPYGLLVWS 114
ILS FD R+ +A + + G+ + G +VK D S K + N G T +PYG+ VWS
Sbjct: 262 ILSMFDKRITAFAEDKFRRDGIDVKTGSMVVKVSDKEISTKEMKNGGEITSIPYGMAVWS 321
Query: 115 TGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 157
TG+G ++ R + DEWLRV +V+A+GDC+
Sbjct: 322 TGIGTRPFIRDFMQQIGQINRRAVATDEWLRVEGTDNVYALGDCA 366
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 60/127 (47%), Gaps = 23/127 (18%)
Query: 168 LPALAQVAERQGKYLFSLLNRIGKA-----------GGGRANSAKDMELGDPFVYRHLGS 216
LPA AQVA +QG YL +R+ + G GR PF Y+HLG
Sbjct: 460 LPATAQVASQQGTYLAKCFDRMEECEINPEGPLRFRGEGRHRFK-------PFRYKHLGQ 512
Query: 217 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 276
A +G +A L + S G S WL W S Y ++ VSWR R V +W F+F
Sbjct: 513 FAPLGGEQAAAQLPGDWVSIGHST----QWL-WYSIYASKQVSWRTRALVVTDWTRRFLF 567
Query: 277 GRDISRI 283
GRD S+I
Sbjct: 568 GRDSSQI 574
>gi|356546676|ref|XP_003541749.1| PREDICTED: probable NADH dehydrogenase-like [Glycine max]
Length = 577
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 96/164 (58%), Gaps = 9/164 (5%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L +SE+EK R+LH +VGGGPTGVEF+ L DF+ D+ + Y +KD + +TL+EA N
Sbjct: 206 LPDVSEDEKKRILHFAIVGGGPTGVEFAASLHDFVNEDLVRLYPGIKDLVKITLLEAGNH 265
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRGIV------KDVDSQKLILNDGTEVPYGLLVWST 115
IL FD R+ +A + + G+ + G + K++ +++L + +PYG+ VWST
Sbjct: 266 ILGMFDKRITAFAEDKFRRDGIDVKTGSMVVKVSEKEISTKELKNGEIKTIPYGMAVWST 325
Query: 116 GVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 157
G+G +K R + DEWLRV +V+A+GDC+
Sbjct: 326 GIGTRPFIKDFMAQIGQASRRALATDEWLRVEGCNNVYALGDCA 369
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 168 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 223
LPA AQVA +QG YL NR+ + + G PF Y+HLG A +G
Sbjct: 463 LPATAQVASQQGTYLAKCFNRMEECEKNPEGPLRFRGEGHHRFKPFRYKHLGQFAPLGGE 522
Query: 224 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ L + S G S WL W S Y ++ VSWR R V +W F+FGRD S I
Sbjct: 523 QTAAQLPGDWVSIGHSS----QWL-WYSVYASKQVSWRTRALVVSDWTRRFIFGRDSSSI 577
>gi|356521297|ref|XP_003529293.1| PREDICTED: external NADH-ubiquinone oxidoreductase 2,
mitochondrial-like [Glycine max]
Length = 580
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 100/165 (60%), Gaps = 10/165 (6%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L +SEEEK R+LH +VGGGPTGVEF+ L D++ D+ Y +KD + +TL+EA +
Sbjct: 208 LPSVSEEEKKRILHFAIVGGGPTGVEFAASLHDYVTEDLVNIYPGIKDLVKITLLEAGDH 267
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVD---SQKLILNDG--TEVPYGLLVWS 114
ILS FD R+ +A + + G+ + G +VK + S K + N G T +PYG+ VWS
Sbjct: 268 ILSMFDKRITAFAEEKFGRDGIDVKTGSMVVKVSEKEISTKEMKNGGAITTIPYGMAVWS 327
Query: 115 TGVGPSTLVKSL--DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS 157
TG+G ++ + ++ I DEWLRV + +V+A+GDC+
Sbjct: 328 TGIGTRPFIRDFMSQIGQTNRRAIATDEWLRVEATNNVYALGDCA 372
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 168 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 223
LPA AQVA +QG YL NR+ + + G PF Y+HLG A +G
Sbjct: 466 LPATAQVASQQGTYLAKCFNRMEECEKNPEGPIRFRGEGRHRFKPFRYKHLGQFAPLGGE 525
Query: 224 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ L + S G S WL W S Y ++ VSWR R V +W F+FGRD S+I
Sbjct: 526 QTAAQLPGDWVSIGHSS----QWL-WYSVYASKQVSWRTRALVVSDWTRRFIFGRDSSQI 580
>gi|209550085|ref|YP_002282002.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209535841|gb|ACI55776.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 421
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 144/276 (52%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VG GPTGVE +G +++ + + + ++ V L+EA +L +F +
Sbjct: 153 RDALLTFTIVGAGPTGVELAGIIAELAHFTLPKEFRNIDTRKTRVVLVEAGPRVLPTFAE 212
Query: 69 RLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA T L K GV + G V D + + + + T V +VW+ GV S L+
Sbjct: 213 ELSAYAQTALEKLGVEIHLGRPVTDCSADGVKIGE-TFVASRTIVWAAGVTASPAAHWLN 271
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ +++ L P + DVF +GD + + GK V P +A A++QG Y+ ++
Sbjct: 272 VPADRAGRVVVEKDLSAPGLPDVFVIGDTALVMREDGKPV-PGIAPAAKQQGGYVAKVIR 330
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ G A + PF YRH GS+ATIG+ A++D + K L G+L+W
Sbjct: 331 --ARLSGKSAPA--------PFRYRHQGSLATIGQSAAIIDFGRIK------LKGWLAWW 374
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 375 IWGLAHIYFLIGTRSRFSVAWSWLWIYLSGQHSARL 410
>gi|452751029|ref|ZP_21950775.1| NADH dehydrogenase [alpha proteobacterium JLT2015]
gi|451961179|gb|EMD83589.1| NADH dehydrogenase [alpha proteobacterium JLT2015]
Length = 434
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 138/273 (50%), Gaps = 22/273 (8%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEANE-ILSSFD 67
E RLL +VGGGPTGVE +G +++ + + ++ + V L EA E +LS+FD
Sbjct: 154 ETRRLLTFAIVGGGPTGVELAGTIAELARTTLARDFTCIDPQGTRVVLCEAGERLLSAFD 213
Query: 68 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
L YA L+ GV + G V+ +DS L+L + + G ++W G + L
Sbjct: 214 PALSAYAADALASLGVEVRTGTAVEAIDSTGLMLGE-ERIDAGAVLWCAGTEARPAARWL 272
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
+ G + ++ VP ++FA+GD + + G+ LP LA VA++QG ++ LL
Sbjct: 273 GAEAARNGAVQVETDCSVPGHPEIFAIGDVASFDGGEGRP-LPGLAPVAKQQGAHVGRLL 331
Query: 187 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
A A E G F YR G+MA IGR +A+ L G+ L GF++W
Sbjct: 332 A---------ARVAGRSEPG-AFRYRDHGTMAVIGRARAVARL------GGMQLKGFVAW 375
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWA-TTFVFGR 278
L W +L +V +R+R V VNW+ F +GR
Sbjct: 376 LAWSLVHLLLLVDFRSRLLVYVNWSWAWFTYGR 408
>gi|294665100|ref|ZP_06730404.1| NADH dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
gi|292605142|gb|EFF48489.1| NADH dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
Length = 430
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 23/276 (8%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDD 68
++ L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF +
Sbjct: 159 RAAWLSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPRQARVRLVEAGPRVLPSFPE 218
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L A QL + GV + G V +D+ L D T VP +VW+ GV S L ++L
Sbjct: 219 DLTAKARKQLERLGVEVHTGTPVTQIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLG 277
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ ++ L VP D+F GD + ++ G+ V P +A A++ GK+
Sbjct: 278 VPLDRAGRVLVEADLSVPGHPDIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH------ 329
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
I KA R + F Y+ G++ATIGR A+V + + L L+G ++W
Sbjct: 330 -IAKAIRARHRG----QTAPAFRYQDYGNLATIGRMAAIVHVGK------LKLSGVVAWW 378
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W +A++ ++ +RNRF V VNWA + + +RI
Sbjct: 379 FWLAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 414
>gi|381170735|ref|ZP_09879889.1| FAD dependent oxidoreductase family protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380688787|emb|CCG36376.1| FAD dependent oxidoreductase family protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 417
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 138/267 (51%), Gaps = 23/267 (8%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDD 68
++ L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF +
Sbjct: 146 RAAWLSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPRQARVRLVEAGPRVLPSFPE 205
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L A QL + GV + G V +D+ L D T VP +VW+ GV S L ++L
Sbjct: 206 DLTAKARKQLERLGVEVHTGTPVTQIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLG 264
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ ++ L VP D+F GD + ++ G+ V P +A A++ GK+
Sbjct: 265 VPLDRAGRVLVEADLSVPGHPDIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH------ 316
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
I KA R + F Y+ G++ATIGR A+V + + L L+G ++W
Sbjct: 317 -IAKAIRARQRG----QTAPAFRYQDYGNLATIGRMAAIVHVGK------LKLSGVVAWW 365
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTF 274
W +A++ ++ +RNRF V VNWA +
Sbjct: 366 FWLAAHVYFLIGFRNRFVVLVNWAMAY 392
>gi|223935272|ref|ZP_03627190.1| cyclic nucleotide-regulated FAD-dependent pyridine
nucleotide-disulphide oxidoreductase [bacterium
Ellin514]
gi|223896156|gb|EEF62599.1| cyclic nucleotide-regulated FAD-dependent pyridine
nucleotide-disulphide oxidoreductase [bacterium
Ellin514]
Length = 535
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 136/268 (50%), Gaps = 20/268 (7%)
Query: 18 VVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLRHYATT 76
+VVGGG +GVE +GE++D + R + + V LI + ++IL RLR +
Sbjct: 165 IVVGGGYSGVEVAGEINDLVRSSTRYFQNVRAQDVKVILIHSRHQILPEIGSRLREFTRR 224
Query: 77 QLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGR 135
++ + GV+ ++ VK + ++L DG + G +V + G P+++V++L K GR
Sbjct: 225 KMEQRGVKVMLDTCVKLASPEGVVLKDGEFLKGGTIVCTIGNSPTSIVEALTTAKE-NGR 283
Query: 136 IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGG 195
+ +R+ +V+AVGDC+ + P Q AERQG + R+
Sbjct: 284 LATRPDMRLRDWSNVWAVGDCAQIINGHDGRPSPPTGQFAERQGTQCAHNIIRV------ 337
Query: 196 RANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLT 255
N+ + PF ++ LG + +IG + A+ ++ G LAGF +W VWR YL
Sbjct: 338 -LNNRET----KPFSFKPLGELCSIGGHSAVAEI------FGHDLAGFAAWFVWRGVYLF 386
Query: 256 RVVSWRNRFYVAVNWATTFVFGRDISRI 283
++ +W RF V ++W +F RD+S +
Sbjct: 387 KLPTWARRFQVGLDWFLLLLFPRDLSHL 414
>gi|373110316|ref|ZP_09524585.1| hypothetical protein HMPREF9712_02178 [Myroides odoratimimus CCUG
10230]
gi|423130640|ref|ZP_17118315.1| hypothetical protein HMPREF9714_01715 [Myroides odoratimimus CCUG
12901]
gi|423134331|ref|ZP_17121978.1| hypothetical protein HMPREF9715_01753 [Myroides odoratimimus CIP
101113]
gi|423327040|ref|ZP_17304848.1| hypothetical protein HMPREF9711_00422 [Myroides odoratimimus CCUG
3837]
gi|371642958|gb|EHO08516.1| hypothetical protein HMPREF9712_02178 [Myroides odoratimimus CCUG
10230]
gi|371644499|gb|EHO10030.1| hypothetical protein HMPREF9714_01715 [Myroides odoratimimus CCUG
12901]
gi|371647088|gb|EHO12598.1| hypothetical protein HMPREF9715_01753 [Myroides odoratimimus CIP
101113]
gi|404607610|gb|EKB07112.1| hypothetical protein HMPREF9711_00422 [Myroides odoratimimus CCUG
3837]
Length = 429
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 138/276 (50%), Gaps = 20/276 (7%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-AN 60
L ++E+ L++ V+VG GPTGVE +G L++ + + Y + + + + +I+ AN
Sbjct: 150 LQTTDDQEQKALMNFVIVGAGPTGVELAGALAEMKKHVLPKDYPDLDFNKMEINVIQGAN 209
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
++L + ++ A L GV++ G IV D +K+ G E ++W+ GV
Sbjct: 210 KVLDAMSEKSSRKAQEFLENLGVKVYLGEIVTDYKGKKVYTKSGKEFTAETVIWTAGVMG 269
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+T+ G RI ++E+ +V D+FA+GD + + P +AQ A +QG
Sbjct: 270 ATVDGFDATVIQRGNRIKVNEYNQVEGFTDIFAIGDVATMMTDKTPMGHPMMAQPAIQQG 329
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+ L + L R+ +D + FVY GSMATIGR KA+VDL +
Sbjct: 330 ELLANNLIRL-----------RDGQPLKSFVYNDKGSMATIGRNKAVVDLPK------FQ 372
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+GF +W VW +L ++ +RN+ V NW ++
Sbjct: 373 FSGFFAWFVWMFVHLMSLIGFRNKLVVFWNWMYNYM 408
>gi|257069847|ref|YP_003156102.1| NADH dehydrogenase, FAD-containing subunit [Brachybacterium faecium
DSM 4810]
gi|256560665|gb|ACU86512.1| NADH dehydrogenase, FAD-containing subunit [Brachybacterium faecium
DSM 4810]
Length = 483
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 135/263 (51%), Gaps = 24/263 (9%)
Query: 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIE-ANEILSSFDDRLRH 72
LH +VGGGPTGVE +G L+DF M+++ Y + + VT+++ +E+L F + R
Sbjct: 178 LHVCIVGGGPTGVEIAGALADFRMQELDILYPEMDPGTLQVTVLQRGDELLKEFSTKYRQ 237
Query: 73 YATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 131
YA +L GV L G VK+V ++L+DG+ + + +W+ GV V P+
Sbjct: 238 YAADELRDRGVTLQLGRGVKEVGYDHVVLDDGSILESDITIWAAGVAIPKSVSEWGFPQD 297
Query: 132 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191
GR+ +D++L+V V+A GD +G E LP LAQ A + G+ + I
Sbjct: 298 KRGRLAVDDYLQVKGFPGVYAAGDIAGQDEP-----LPQLAQPAIQTGE---AAARNIAA 349
Query: 192 AGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRS 251
G+ F Y +LG+MATIGR+ A+ ++ GLS G + W W
Sbjct: 350 EVAGKPRKT--------FAYTNLGTMATIGRHAAIAEI---PVLGGLS--GSVGWAAWLG 396
Query: 252 AYLTRVVSWRNRFYVAVNWATTF 274
++ +++ RN+ VA+N + +
Sbjct: 397 VHIMKMIGHRNQRAVAMNLLSLY 419
>gi|390990453|ref|ZP_10260738.1| FAD dependent oxidoreductase family protein [Xanthomonas axonopodis
pv. punicae str. LMG 859]
gi|372554776|emb|CCF67713.1| FAD dependent oxidoreductase family protein [Xanthomonas axonopodis
pv. punicae str. LMG 859]
Length = 417
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 23/276 (8%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDD 68
++ L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF +
Sbjct: 146 RAAWLSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPRQARVRLVEAGPRVLPSFPE 205
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L A QL + GV + G V +D+ L GT VP +VW+ GV S L ++L
Sbjct: 206 DLTAKARKQLERLGVEVHTGTPVTQIDALGYQLG-GTFVPARTVVWAAGVAASPLARTLG 264
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ ++ L VP D+F GD + ++ G+ V P +A A++ GK+
Sbjct: 265 VPLDRAGRVLVEADLSVPGHPDIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH------ 316
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
I KA R + F Y+ G++ATIGR A+V + + L L+G ++W
Sbjct: 317 -IAKAIRARQRG----QTAPAFRYQDYGNLATIGRMAAIVHVGK------LKLSGVVAWW 365
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W +A++ ++ +RNRF V VNWA + + +RI
Sbjct: 366 FWLAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 401
>gi|320162268|ref|YP_004175493.1| putative oxidoreductase [Anaerolinea thermophila UNI-1]
gi|319996122|dbj|BAJ64893.1| putative oxidoreductase [Anaerolinea thermophila UNI-1]
Length = 427
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 141/281 (50%), Gaps = 26/281 (9%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEA-NEILSSF 66
E++ +L V GGGP+GVE +G LS+ I +++ + I V L+EA + +L +
Sbjct: 153 EKRRAMLTFAVAGGGPSGVEMAGALSELIHGVLKRDFPGFDLSIARVILLEAADRLLPAM 212
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
L+ L GV + + V+ D + L DG ++P L+W TG+ + L +
Sbjct: 213 PPALQQATLQALHAKGVEVWLNAPVESYDGTLIRLKDGRQIPSRTLIWVTGIRAAGLAER 272
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
+ P++ GRI + L+VP +VF +GD + YLE LP +A VA +Q +
Sbjct: 273 IPAPRASNGRIRVQPTLQVPGYPEVFVIGDAA-YLEDEHGNPLPMVAPVALQQADWAV-- 329
Query: 186 LNRIGKAGGGRANSAKDMELGD--PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
AN +E PF YR G MATIGR +A+ L + + L GF
Sbjct: 330 -----------ANVQCLLEGKPLLPFRYRDPGMMATIGRNQAVARLGRFR------LRGF 372
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWA-TTFVFGRDISRI 283
L+WL+W ++ +++ +RNR V +NWA F++ R + I
Sbjct: 373 LAWLMWVVVHIFQLIGFRNRLAVMLNWAWDYFLYDRALRLI 413
>gi|385210243|ref|ZP_10037111.1| NADH dehydrogenase, FAD-containing subunit [Burkholderia sp. Ch1-1]
gi|385182581|gb|EIF31857.1| NADH dehydrogenase, FAD-containing subunit [Burkholderia sp. Ch1-1]
Length = 435
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 138/282 (48%), Gaps = 29/282 (10%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELS----DFIMRDVRQRYSHVKDYIHVTLIEAN-EIL 63
++++ L V++GGGPTGVE +G ++ D + RD R S V LIEA +L
Sbjct: 156 QQRAALQTFVIIGGGPTGVELAGTIAELARDTLARDFR---SIDPSTSRVVLIEAGPRLL 212
Query: 64 SSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
S F L Y L K GV +V G S ++ G + +VW+ GV S
Sbjct: 213 SVFPKDLSAYTRQALEKLGVEVVLGTPVTECSADGVVYGGKPLSAKTIVWAAGVQASPAA 272
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
+ L GR+ + L V +VFA+GD + + GK V P +A A++QGKY+
Sbjct: 273 RWLGAASDRAGRVVVGPDLTVAGRPEVFAIGDTASCTMADGKPV-PGIAPAAKQQGKYVA 331
Query: 184 SLLNR--IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
+L+ R GK G PF YRH G++ATIGR A++D+ + K L
Sbjct: 332 NLIGRRLKGKPADG------------PFKYRHQGNLATIGRSLAVIDMGRVK------LR 373
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G +W +W+ A++ ++ RNR VA++W G SRI
Sbjct: 374 GAFAWWIWKLAHIYFLIGTRNRLSVALSWVWNHSIGYRGSRI 415
>gi|432336862|ref|ZP_19588330.1| NADH dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
gi|430776194|gb|ELB91649.1| NADH dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
Length = 434
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 141/282 (50%), Gaps = 38/282 (13%)
Query: 7 SEEEKSR-LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIE-ANEIL 63
S+ E+ R LLH +V+G GPTGVE +G++ + R + + + + VTL+E ANE L
Sbjct: 151 SDPERRRDLLHFIVIGAGPTGVELAGQIKELAGRYFEKSLRDITSEDVTVTLVEGANETL 210
Query: 64 SSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT-----EVPYGLLVWSTGV 117
F +L Y L K+GV +V G +V D+D L+ + + ++WS G+
Sbjct: 211 PVFGGKLSKYTQDSLEKAGVEVVLGTMVTDIDEHGATLSSPSAGFEKRLTADTIIWSAGI 270
Query: 118 GP----STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
+ L GGR+ +DE L V DVFA+GD + LPA +
Sbjct: 271 QANDFAAVLADRTGCETGRGGRLLVDEDLTVGRYDDVFAIGDMASL------NNLPAQSP 324
Query: 174 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 233
A + G+++ +++ G RA LG PF YR GSMA I R++A+ + +
Sbjct: 325 FAMQGGRHVAAIIT------GKRA-------LGTPFTYRDKGSMAIINRFRAITRVGK-- 369
Query: 234 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+ L G L+W +W + +L +V +RNR+ ++W +F+
Sbjct: 370 ----VELTGVLAWFLWLAVHLVYLVGFRNRYVAVMSWCGSFL 407
>gi|424854604|ref|ZP_18278962.1| NADH dehydrogenase [Rhodococcus opacus PD630]
gi|356664651|gb|EHI44744.1| NADH dehydrogenase [Rhodococcus opacus PD630]
Length = 434
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 141/282 (50%), Gaps = 38/282 (13%)
Query: 7 SEEEKSR-LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIE-ANEIL 63
S+ E+ R LLH +V+G GPTGVE +G++ + R + + + + VTL+E ANE L
Sbjct: 151 SDPERRRDLLHFIVIGAGPTGVELAGQIKELAGRYFEKSLRDITSEDVTVTLVEGANETL 210
Query: 64 SSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT-----EVPYGLLVWSTGV 117
F +L Y L K+GV +V G +V D+D L+ + + ++WS G+
Sbjct: 211 PVFGGKLSKYTQDSLEKAGVEVVLGTMVTDIDEHGATLSSPSTGFEKRLTADTIIWSAGI 270
Query: 118 GP----STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
+ L GGR+ +DE L V DVFA+GD + LPA +
Sbjct: 271 QANDFAAVLADRTGCETGRGGRLLVDEDLTVGRYDDVFAIGDMASL------NNLPAQSP 324
Query: 174 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 233
A + G+++ +++ G RA LG PF YR GSMA I R++A+ + +
Sbjct: 325 FAMQGGRHVAAIIT------GKRA-------LGTPFTYRDKGSMAIINRFRAITRVGK-- 369
Query: 234 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+ L G L+W +W + +L +V +RNR+ ++W +F+
Sbjct: 370 ----VELTGVLAWFLWLAVHLVYLVGFRNRYVAVMSWCGSFL 407
>gi|408793720|ref|ZP_11205326.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira meyeri
serovar Hardjo str. Went 5]
gi|408462224|gb|EKJ85953.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira meyeri
serovar Hardjo str. Went 5]
Length = 423
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 146/284 (51%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN- 60
L G E+ KS +H V++GGGPTGVE +G +++ +R+ + ++ VTLIEA
Sbjct: 148 LIGNYEKAKS-FMHYVIIGGGPTGVELAGSIAELSHNIIRKDFRNIDSGMTKVTLIEAGP 206
Query: 61 EILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L++F+++ + +L GV L V ++ ++L D T + ++W+ GV
Sbjct: 207 RLLTAFNEKSSQFTKEKLESRGVEVLTNSPVLEITDTGVVLKDRT-IESKTVIWAAGVEG 265
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
S L K+L + K RI +DE+ R +VF +GD + Y + LP ++ VA +QG
Sbjct: 266 SELAKNLPINKDKANRIIVDEYCRTFEFPEVFVIGDAANYSSGLSRP-LPGVSPVAMQQG 324
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+Y+ +++ + K K + PF Y G+MATIGR A+ + + +
Sbjct: 325 RYVAKVIDSVEK--------KKSI---TPFHYFDKGNMATIGRTDAVAEFGK------IR 367
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L G L WL W +L V ++N+ ++W +++ R SR+
Sbjct: 368 LKGILGWLGWLFVHLVYQVGFKNKVSTLLSWVWSYLTFRAGSRL 411
>gi|225561456|gb|EEH09736.1| external NADH-ubiquinone oxidoreductase [Ajellomyces capsulatus
G186AR]
Length = 556
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 158/340 (46%), Gaps = 79/340 (23%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
++ + + LL +VG GPTG E S L DFI D+ + Y +K + + L + A +LS
Sbjct: 232 VTSQMRRHLLRFAIVGAGPTGTELSASLCDFIHEDMFKVYPQLKGDVRIILYDVAPTVLS 291
Query: 65 SFDDRLRHYATTQLSKSGV--RLVRGI------------VKDVDSQKLI---LNDGTEVP 107
+FD L YA L + GV ++ R I + ++D + + + E
Sbjct: 292 TFDKSLSRYAMETLKREGVTIKMNRHIEELRWGEPNTEGLHEMDPKSCLTLRTKEEGEEG 351
Query: 108 YGLLVWSTG--VGP---------------STLVKSLDLP------------KSPG-GRIG 137
G+ VW+TG +GP S L K P K+P G +
Sbjct: 352 VGMCVWATGNEIGPFVNKALNTIDPFPILSALSKETGSPVTEPQITTWKVHKTPKVGALL 411
Query: 138 IDEWLR---------VPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 188
+D LR + +QDVFA+GD + LES PA AQ ++ +L ++LNR
Sbjct: 412 VDSHLRLQLKSAGGQIAVLQDVFALGD-TCMLESGSP---PATAQATSQEAIWLANVLNR 467
Query: 189 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDL------RQNKESKGLSLAG 242
+++L F +++LG +A IG KAL+ L N + G
Sbjct: 468 ------------GNLDLSPGFSFKNLGVLAYIGSSKALMQLPHEGGSEPNDNGFFRGIKG 515
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
+ +WL+W+ AYL+ +SWRNR + ++W + ++FGRD+SR
Sbjct: 516 YPAWLIWKGAYLSMSMSWRNRLRILLSWFSNWLFGRDVSR 555
>gi|325090897|gb|EGC44207.1| external NADH-ubiquinone oxidoreductase [Ajellomyces capsulatus
H88]
Length = 556
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 160/340 (47%), Gaps = 79/340 (23%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
++ + + LL +VG GPTG E S L DFI D+ + Y +K + + L + A +LS
Sbjct: 232 VTSQMRRHLLRFAIVGAGPTGTELSASLCDFIHEDMFKVYPQLKGDVRIILYDVAPTVLS 291
Query: 65 SFDDRLRHYATTQLSKSGV--RLVRGI------------VKDVDSQKLI---LNDGTEVP 107
+FD L YA L + GV ++ R I + ++D + + + E
Sbjct: 292 TFDKSLSRYAMETLKREGVTIKMNRHIEELRWGEPNTEGLHEMDPKSCLTLRTKEEGEEG 351
Query: 108 YGLLVWSTG--VGP---------------STLVKSLDLP------------KSPG-GRIG 137
G+ VW+TG +GP S L K P K+P G +
Sbjct: 352 VGMCVWATGNEIGPFVNKALNTIDPFPILSALSKDTGSPVTEPQNTTWKVHKTPKVGALL 411
Query: 138 IDEWLR---------VPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 188
+D LR + +QDVFA+GD + LES PA AQ ++ +L ++LNR
Sbjct: 412 VDSHLRLQLKSAGGQIAVLQDVFALGD-TCMLESGSP---PATAQATSQEAIWLANVLNR 467
Query: 189 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS------LAG 242
+++L F +++LG +A IG KAL+ L S+ + + G
Sbjct: 468 ------------GNLDLSPGFSFKNLGVLAYIGSSKALMQLPHEGGSEPNNNGFFRGIKG 515
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
+ +WL+W+ AYL+ +SWRNR + ++W + ++FGRD+SR
Sbjct: 516 YPAWLIWKGAYLSMSMSWRNRLRILLSWFSNWLFGRDVSR 555
>gi|325106392|ref|YP_004276046.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Pedobacter saltans DSM 12145]
gi|324975240|gb|ADY54224.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Pedobacter saltans DSM 12145]
Length = 426
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 139/284 (48%), Gaps = 32/284 (11%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIE-ANEILSS 65
+EEK+RL+ V+ GGGPTGVE SG L++ VR+ Y V + L+ E+LS
Sbjct: 151 QEEKTRLMTVVIAGGGPTGVEISGMLAELRKSTVRREYPELVGTRFELYLVNGGGELLSP 210
Query: 66 FDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
+ + Y L K GV L+ V D K+ L +G + L+W++G VK
Sbjct: 211 MSVKSQTYTLESLEKLGVNILLNTRVTDFKDSKVYLGNGDTIEAETLIWASG------VK 264
Query: 125 SLDLPKSP------GGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAER 177
++ P G R+ +D + +V ++D++A+GD C + P LAQVA +
Sbjct: 265 AISFEGLPANIYGSGNRMIVDSFNKVRGMEDIYALGDTCVVTEDPEYPGGHPQLAQVAIQ 324
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
QGK L + RI K E PF Y GSMA IG+ KA+ D+ K
Sbjct: 325 QGKNLAANFMRILK-----------QEPLLPFKYDDKGSMAIIGKNKAVADI----PFKN 369
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
+ GF++WL W +L ++++RNR NW+ + F +D S
Sbjct: 370 IHFQGFIAWLAWLFIHLMSLLNYRNRMKTLYNWSIAY-FTKDNS 412
>gi|78355689|ref|YP_387138.1| NADH dehydrogenase (ubiquinone) [Desulfovibrio alaskensis G20]
gi|78218094|gb|ABB37443.1| NADH dehydrogenase (ubiquinone) [Desulfovibrio alaskensis G20]
Length = 428
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 139/280 (49%), Gaps = 22/280 (7%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILS 64
+ + K R+L VVGGGPTGVE++G L++ I + + + + + V L+EA + +L+
Sbjct: 155 NPDRKDRILTYTVVGGGPTGVEYAGALAELIRQPLTKDFPTLNTGQARVVLLEAGDGLLA 214
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
F D LR YA +L+ GV + + V V + L + + +VW+ GV L
Sbjct: 215 GFPDHLRRYAFERLTHMGVDVRLNAKVTAVTPDSVELEGSSPLRTETVVWTAGVQGHALA 274
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
+ LP GGR+ + L+V DVF GD + G + P +A A +QG
Sbjct: 275 GQMGLPTGRGGRVPVLPTLQVEGHPDVFVAGDMA---LPQGDSPAPLIAPNAIQQGALA- 330
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
+ I A GR A F YR GSMATIGR A+V R KE + GF
Sbjct: 331 --ADNIRAALAGRPLRA--------FRYRDKGSMATIGRAAAVV--RMGKEH---TATGF 375
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
++W++W +L +V +RNR +V WA ++F +RI
Sbjct: 376 VAWVMWLFIHLLYLVGFRNRLFVLFTWAWDYIFFERAARI 415
>gi|340348396|ref|ZP_08671480.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella dentalis
DSM 3688]
gi|433653260|ref|YP_007297114.1| NADH dehydrogenase, FAD-containing subunit [Prevotella dentalis DSM
3688]
gi|339606965|gb|EGQ11917.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella dentalis
DSM 3688]
gi|433303793|gb|AGB29608.1| NADH dehydrogenase, FAD-containing subunit [Prevotella dentalis DSM
3688]
Length = 437
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 143/274 (52%), Gaps = 23/274 (8%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILS 64
+EE + RL++ V+VGGGP+GVE +G L++ V + Y + +H+ L+++ + +L
Sbjct: 155 NEEARQRLMNVVIVGGGPSGVEIAGALAEMKRTIVPRDYPDLDASRMHICLLDSGDRLLK 214
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
D L A L++ G+++++G V D + ++L G + GL VW +GV S +
Sbjct: 215 GMDAGLSARAERDLTELGIKVMKGCRVVDCNDCGVVLQGGDTLEAGLTVWVSGVRASAIG 274
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVL--PALAQVAERQGKY 181
GRI D + RV V +V+AVGD S +E L P LAQVA +Q
Sbjct: 275 GLPTASIGHAGRILTDRYCRVKGVPNVYAVGDQS-LVEGDEAYPLGHPQLAQVAMQQAAT 333
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
+ L+R + GRA PF YR+LG+MATIGR KA+ ++ +
Sbjct: 334 VAHNLSRRLE---GRAE--------QPFSYRNLGAMATIGRKKAVAEIGR------FRFG 376
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
GF +WL+W +L ++ RN+ V +NW ++
Sbjct: 377 GFPAWLLWLVVHLRSILGVRNKTVVFLNWVWNYL 410
>gi|336322448|ref|YP_004602415.1| NADH dehydrogenase (ubiquinone) [Flexistipes sinusarabici DSM 4947]
gi|336106029|gb|AEI13847.1| NADH dehydrogenase (ubiquinone) [Flexistipes sinusarabici DSM 4947]
Length = 410
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 145/279 (51%), Gaps = 23/279 (8%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANE-ILSS 65
EEE+ + L V+VGGGPTGVE +G + + + + + ++ + + LIEAN IL S
Sbjct: 148 EEERKKHLTFVIVGGGPTGVELAGAIGEITRITLTKEFRNIDPSLSRIILIEANNTILRS 207
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
FD +L A L GV++ V D+ + + + T + ++W+ G ++L +
Sbjct: 208 FDKKLIKKALRDLESLGVQVWTNSRVTDISGDYINIANET-IKTSTIMWAAGTMANSLAE 266
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
++ K G+I ++ L + DV+AVGD + E G+ VLP LA VA +QGKY
Sbjct: 267 KINCDKDQMGKILVENDLSLNQFPDVYAVGDIV-HFEQNGR-VLPGLAPVAMQQGKYAAK 324
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
+ I K G+ PF YR G +ATIGR KA+ ++++ K ++G L
Sbjct: 325 V---ILKREAGKPYK--------PFKYRDKGQLATIGRSKAIAEIKRFK------VSGTL 367
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W+ W ++ + ++NR V + WA ++ + +RI
Sbjct: 368 AWITWLFVHILYLTGFKNRMLVMLQWAWSYFTFKKGARI 406
>gi|325913821|ref|ZP_08176180.1| NADH dehydrogenase, FAD-containing subunit [Xanthomonas vesicatoria
ATCC 35937]
gi|325539896|gb|EGD11533.1| NADH dehydrogenase, FAD-containing subunit [Xanthomonas vesicatoria
ATCC 35937]
Length = 421
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 137/267 (51%), Gaps = 23/267 (8%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDD 68
++ L VVGGGPTGVE +G L++ + + H+ V L+EA +L SF D
Sbjct: 150 RAAWLSFAVVGGGPTGVELAGTLAEIARHTLNNEFRHIDPRQARVRLVEAGPRVLPSFPD 209
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L A QL + GV + G V +D+ L D T VP +VW+ GV S L ++L
Sbjct: 210 DLTDKARRQLERLGVEVHTGTPVTHIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLG 268
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ + L VP ++F GD + ++ G+ V P +A A++ GK+
Sbjct: 269 VPLDRAGRVLVQPDLSVPGHPEIFVGGDLAS-VQQGGRPV-PGVAPAAKQMGKH------ 320
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
I KA R + + F Y+ G++ATIGR A+V + + L L+G ++W
Sbjct: 321 -IAKAIRARQHG----QAAAAFRYQDFGNLATIGRMAAIVHVGK------LKLSGIVAWW 369
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTF 274
W +A++ ++ +RNRF V VNWA +
Sbjct: 370 FWLAAHVYFLIGFRNRFVVLVNWAMAY 396
>gi|378826504|ref|YP_005189236.1| putative NADH dehydrogenase [Sinorhizobium fredii HH103]
gi|365179556|emb|CCE96411.1| putative NADH dehydrogenase [Sinorhizobium fredii HH103]
Length = 422
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 141/288 (48%), Gaps = 24/288 (8%)
Query: 2 FLAGISEEEKSR---LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLI 57
F SEE+ +R LL ++G GPTGVE +G +++ R + + + V L+
Sbjct: 142 FEQAESEEDPARRDALLTFTIIGAGPTGVELAGIIAEMAHRTLPDEFRRIDTRQARVILV 201
Query: 58 EAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWST 115
EA IL +F + L YA +L+K GV + G V D + + + D + VP LVW+
Sbjct: 202 EAGARILPTFAEELSAYAMAELAKLGVEVRTGTPVTDCTADGVRIGD-SFVPSCTLVWAA 260
Query: 116 GVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
GV S K L + GR +D+ L P F +GD + + G V P +A A
Sbjct: 261 GVQASPAAKWLGIEADRAGRAMVDQDLTAPGNPSAFVIGDTALVKQENGAPV-PGIAPAA 319
Query: 176 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 235
++QG Y+ ++ K PF YRH GS+ATIG+ A++D + K
Sbjct: 320 KQQGAYVARVIR----------ARLKGQPAPGPFRYRHQGSLATIGKRAAIIDFGRIK-- 367
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L G L+W +W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 368 ----LKGGLAWWIWGIAHIYFLIGTRSRFAVAWSWLWIYLSGQHSARL 411
>gi|402302518|ref|ZP_10821629.1| pyridine nucleotide-disulfide oxidoreductase [Selenomonas sp.
FOBRC9]
gi|400380336|gb|EJP33155.1| pyridine nucleotide-disulfide oxidoreductase [Selenomonas sp.
FOBRC9]
Length = 426
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 141/283 (49%), Gaps = 21/283 (7%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--IHVTLIEA-NEILS 64
++E+ R L+ V+VGGG TG+E +G + + I DV ++ H D+ +HV L+EA +L
Sbjct: 152 DDERQRHLNFVIVGGGATGIELAGAIIELI--DVFKKEYHSLDFSRVHVILLEAMGSVLP 209
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
L+ L K GV + + V D D L L G +P ++W+ GV +
Sbjct: 210 MVPPDLQQKTIDVLRKKGVDVRLNTAVTDYDGSTLSLKGGDVIPTKTVIWAAGVRAQDFI 269
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGK---TVLPALAQVAERQGK 180
K GRI ++E L V VFA+GDC+ + T + TV P Q A + G+
Sbjct: 270 KDCGGEVDRAGRIIVEENLLVRGSDCVFAIGDCANFQHGTERPLPTVAPVATQEALQVGR 329
Query: 181 YLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 240
+ +L++ GK K ELG FVY+ LG+MATI R +A+++ +
Sbjct: 330 NIMALIH--GK---------KPEELGR-FVYQDLGAMATIARGEAVMNGPIPVIGINMKA 377
Query: 241 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+GF++W W +L R+ F V + W ++ G+ ++RI
Sbjct: 378 SGFIAWTAWMFVHLMRLAGKYANFTVMMKWIWNYILGKRLARI 420
>gi|320529376|ref|ZP_08030464.1| pyridine nucleotide-disulfide oxidoreductase [Selenomonas artemidis
F0399]
gi|320138342|gb|EFW30236.1| pyridine nucleotide-disulfide oxidoreductase [Selenomonas artemidis
F0399]
Length = 426
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 141/283 (49%), Gaps = 21/283 (7%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--IHVTLIEA-NEILS 64
++E+ R L+ V+VGGG TG+E +G + + I DV ++ H D+ +HV L+EA +L
Sbjct: 152 DDERQRHLNFVIVGGGATGIELAGAIIELI--DVFKKEYHSLDFSRVHVILLEAMGSVLP 209
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
L+ L K GV + + V D D L L G +P ++W+ GV +
Sbjct: 210 MVPPDLQQKTIDVLRKKGVDVRLNTAVTDYDGSTLSLKGGDVIPTKTVIWAAGVRAQDFI 269
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGK---TVLPALAQVAERQGK 180
K GRI ++E L V VFA+GDC+ + T + TV P Q A + G+
Sbjct: 270 KDCGGEVDRAGRIIVEENLLVRGSDCVFAIGDCANFQHGTERPLPTVAPVATQEALQVGR 329
Query: 181 YLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 240
+ +L++ GK K ELG FVY+ LG+MATI R +A+++ +
Sbjct: 330 NIMALIH--GK---------KPEELGR-FVYQDLGAMATIARGEAVMNGPIPVIGINMKA 377
Query: 241 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+GF++W W +L R+ F V + W ++ G+ ++RI
Sbjct: 378 SGFIAWTAWMFVHLMRLAGKYANFTVMMKWIWNYILGKRLARI 420
>gi|262193707|ref|YP_003264916.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Haliangium ochraceum DSM 14365]
gi|262077054|gb|ACY13023.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Haliangium ochraceum DSM 14365]
Length = 478
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 134/265 (50%), Gaps = 21/265 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFD 67
E + L VVVGGGPTG+E +G L + + + + + V L+EA E+L +
Sbjct: 165 EARLALTTMVVVGGGPTGLETAGALYELYNNVLAKEFPGQDLEVRVLLVEAGEELLDPYP 224
Query: 68 DRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
LR A Q+ GV +V + V DV + + L DGT + LVW+ GV S L L
Sbjct: 225 PSLRQAALEQVRSLGVDVVFKNPVVDVTPEHVELKDGTRIATCTLVWAAGVSASPLGDQL 284
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG-KYLFSL 185
+ + R+ ++ L++ D++ VGD + YLE P + QVA +Q + ++
Sbjct: 285 GVDLAWQKRVPVEPSLQIKGEPDIYCVGDMA-YLEDEAGKPYPGVIQVARQQSIRAAENI 343
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
LNR+ + +PF YR LG+MATIGR +A+ L NK + L G L+
Sbjct: 344 LNRLSQVE------------QEPFQYRDLGTMATIGRRRAVAWLF-NK----IRLRGILA 386
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNW 270
WL W +L ++ +RNR V VNW
Sbjct: 387 WLAWVVLHLVMLMGFRNRLNVFVNW 411
>gi|336397736|ref|ZP_08578536.1| NADH dehydrogenase (ubiquinone) [Prevotella multisaccharivorax DSM
17128]
gi|336067472|gb|EGN56106.1| NADH dehydrogenase (ubiquinone) [Prevotella multisaccharivorax DSM
17128]
Length = 451
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 142/281 (50%), Gaps = 36/281 (12%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEA 59
+EEE+ LL+ V+VGGG TGVE +G +S+ +RY DY +H+ L+EA
Sbjct: 155 TEEERQELLNIVIVGGGATGVEIAGAISEM------KRYVIPNDYPDMDASHMHIYLLEA 208
Query: 60 -NEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGV 117
+ +L+ A T L GV + G +V D ++++ DGT + +W +G+
Sbjct: 209 GDRLLAGMSKESSDKALTFLKSMGVDVQFGKMVTDYRDFRVMIKDGTSIATRTFLWVSGI 268
Query: 118 --GPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQV 174
P T + L + G RI +DE+ RV + +FA+GD C ++ P LAQV
Sbjct: 269 RAQPITGIDGDRLGR--GFRINVDEYNRVQGLDGIFAIGDQCLMTADAAYPKGHPQLAQV 326
Query: 175 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 234
A +Q + L L +I D L PF Y+ LGSMATIGR KA+ D+ +
Sbjct: 327 AIQQARLLAQNLRKIDHG---------DASL-TPFHYKDLGSMATIGRNKAVADIGK--- 373
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+ GF++WL+W +L ++ RN+ V + WA ++
Sbjct: 374 ---IHTQGFIAWLLWLVVHLRSILGVRNKLVVMLTWAWQYI 411
>gi|313895815|ref|ZP_07829369.1| pyridine nucleotide-disulfide oxidoreductase [Selenomonas sp. oral
taxon 137 str. F0430]
gi|312975240|gb|EFR40701.1| pyridine nucleotide-disulfide oxidoreductase [Selenomonas sp. oral
taxon 137 str. F0430]
Length = 426
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 141/283 (49%), Gaps = 21/283 (7%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--IHVTLIEA-NEILS 64
++E+ R L+ V+VGGG TG+E +G + + I DV ++ H D+ +HV L+EA +L
Sbjct: 152 DDERQRHLNFVIVGGGATGIELAGAIIELI--DVFKKEYHSLDFSRVHVILLEAMGSVLP 209
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
L+ L K GV + + V D D L L G +P ++W+ GV +
Sbjct: 210 MVPPDLQQKTIDVLRKKGVDVRLNTAVTDYDGSTLSLKGGDVIPTKTVIWAAGVRAQDFI 269
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGK---TVLPALAQVAERQGK 180
K GRI ++E L V VFA+GDC+ + T + TV P Q A + G+
Sbjct: 270 KDCGGEVDRAGRIIVEENLLVRGSDCVFAIGDCANFQHGTERPLPTVAPVATQEALQVGR 329
Query: 181 YLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 240
+ +L++ GK K ELG FVY+ LG+MATI R +A+++ +
Sbjct: 330 NIMALIH--GK---------KPEELGR-FVYQDLGAMATIARGEAVMNGPIPVIGINMKA 377
Query: 241 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+GF++W W +L R+ F V + W ++ G+ ++RI
Sbjct: 378 SGFIAWTAWMFVHLMRLAGKYANFTVMMKWIWNYILGKRLARI 420
>gi|188574759|ref|YP_001911688.1| NADH dehydrogenase [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188519211|gb|ACD57156.1| NADH dehydrogenase [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 417
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 142/276 (51%), Gaps = 23/276 (8%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDD 68
++ L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF +
Sbjct: 146 RAAWLSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPQQARVRLVEAGPRVLPSFPE 205
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L A QL + GV + G V +D+ L D T VP +VW+ GV S L ++L
Sbjct: 206 DLTDKARKQLQRLGVEVHTGTPVTHIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLG 264
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ ++ L VP ++F GD + ++ G+ V P +A A++ GK+
Sbjct: 265 VPLDRAGRVLVEADLSVPGHPEIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH------ 316
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
I KA R + F Y+ G++ATIGR A+V + + L L+G ++W
Sbjct: 317 -IAKAIRARHRG----QTAPAFRYQDYGNLATIGRMAAIVHVGK------LKLSGIVAWW 365
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W +A++ ++ +RNRF V VNWA + + +RI
Sbjct: 366 FWLAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 401
>gi|78049503|ref|YP_365678.1| NADH dehydrogenase [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|78037933|emb|CAJ25678.1| putative NADH dehydrogenase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 441
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 135/263 (51%), Gaps = 23/263 (8%)
Query: 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDDRLRH 72
L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF + L
Sbjct: 174 LSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPRQARVRLVEAGPRVLPSFPEDLTA 233
Query: 73 YATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 131
A QL + GV + G V +D L D T VP +VW+ GV S L ++L +P
Sbjct: 234 KARKQLERLGVEVHTGTPVTQIDVLGYQLGD-TFVPARTVVWAAGVAASPLARTLGVPLD 292
Query: 132 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191
GR+ ++ L VP D+F GD + ++ G+ V P +A A++ GK+ I K
Sbjct: 293 RAGRVLVEADLSVPGHPDIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH-------IAK 343
Query: 192 AGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRS 251
A R + F Y+ G++ATIGR A+V + + L L+G ++W W +
Sbjct: 344 AIRARQRG----QTAPAFRYQDYGNLATIGRMAAIVHVGK------LKLSGIVAWWFWLA 393
Query: 252 AYLTRVVSWRNRFYVAVNWATTF 274
A++ ++ +RNRF V VNWA +
Sbjct: 394 AHVYFLIGFRNRFVVLVNWAMAY 416
>gi|304438482|ref|ZP_07398422.1| NADH dehydrogenase [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304368565|gb|EFM22250.1| NADH dehydrogenase [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 427
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 135/279 (48%), Gaps = 15/279 (5%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--IHVTLIEA-NEILSS 65
EE+ R L+ V+VGGG TG+E +G + + I V ++ H D+ +HVTL+EA +L
Sbjct: 154 EERLRHLNFVIVGGGATGIEMAGAIMELI--GVFKKEFHNIDFSEVHVTLLEAMGSVLPM 211
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
L+ + L K GV + + V D L+L DG + ++W+ GV +K
Sbjct: 212 VPPDLQQHTIDVLRKKGVDVRLNTAVTAYDGNDLVLKDGEIISTKTVIWAAGVRAQDFIK 271
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
GRI ++E L V VFA+GDC+ + T + LP +A VA ++ +
Sbjct: 272 DCGGEVDRAGRIIVEENLLVKGSDCVFAIGDCANFQHGTERP-LPTVAPVATQEAMQV-- 328
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
KA S K + FVY LG+MATIGR +A+++ L +GF
Sbjct: 329 ------KANIMALISGKMPDQLGKFVYHDLGAMATIGRGEAVMNGPMPVLGFNLKASGFF 382
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W W +L R+ F V++ W F FG ++RI
Sbjct: 383 AWFAWMLVHLIRLAGKYADFTVSIKWIWNFFFGTRLARI 421
>gi|325924313|ref|ZP_08185857.1| NADH dehydrogenase, FAD-containing subunit [Xanthomonas gardneri
ATCC 19865]
gi|325545178|gb|EGD16488.1| NADH dehydrogenase, FAD-containing subunit [Xanthomonas gardneri
ATCC 19865]
Length = 417
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 143/276 (51%), Gaps = 23/276 (8%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDD 68
++ L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF +
Sbjct: 146 RAAWLSFAVVGGGPTGVELAGTLAEIARHTLKDEFRHIDPQQARVRLVEAGPRVLPSFPE 205
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L A QL + GV + G V +D+ L D T VP +VW+ GV S L ++L
Sbjct: 206 DLTDKARKQLERLGVEVHTGTPVTHIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLG 264
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ + L VP ++F GD + ++ G+ V P +A A++ GK++ +
Sbjct: 265 VPLDRAGRVLVQPDLSVPGHPEIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKHIAKAIR 322
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ G+A A F Y+ G++ATIGR A+V + + L L+G ++W
Sbjct: 323 ARHR---GQATPA--------FRYQDYGNLATIGRMAAIVHVGK------LKLSGIVAWW 365
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W +A++ ++ +RNRF V VNWA + + +RI
Sbjct: 366 FWLAAHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 401
>gi|424885046|ref|ZP_18308657.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. trifolii WSM2012]
gi|424886426|ref|ZP_18310034.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. trifolii WSM2012]
gi|393175777|gb|EJC75819.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. trifolii WSM2012]
gi|393176808|gb|EJC76849.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. trifolii WSM2012]
Length = 421
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 142/276 (51%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VG GPTGVE +G +++ + + + ++ V L+EA L SF +
Sbjct: 153 RDALLTFTIVGAGPTGVELAGIIAELAHFTLPKEFRNIDTRKTRVVLVEAGPRALPSFAE 212
Query: 69 RLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L K GV + G V + + + + + T V +VW+ GV S + L+
Sbjct: 213 ELSAYAEKALEKLGVEIHLGRAVTECSADGVKIGE-TFVASRTIVWAAGVTASPAARWLN 271
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
P GR+ +++ L P + DVF +GD + + GK V P +A A++QG Y+ ++
Sbjct: 272 APADRAGRVAVEKGLSAPGLPDVFVIGDTASVMREDGKPV-PGIAPAAKQQGGYVAKVI- 329
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
RA + G PF YRH GS+ATIG+ A++D + K L G+++W
Sbjct: 330 --------RARLSGKPAPG-PFRYRHQGSLATIGQSAAIIDFGRIK------LKGWIAWW 374
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 375 IWGLAHIYFLIGTRSRFSVAWSWLWIYLSGQHSARL 410
>gi|373460111|ref|ZP_09551868.1| hypothetical protein HMPREF9944_00132 [Prevotella maculosa OT 289]
gi|371956597|gb|EHO74381.1| hypothetical protein HMPREF9944_00132 [Prevotella maculosa OT 289]
Length = 424
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 139/271 (51%), Gaps = 29/271 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSS 65
E ++ RLL +VGGGP+GVE +G L++ + + Y + +H+ LI A +L +
Sbjct: 156 EVKRQRLLTIAIVGGGPSGVEIAGALAEMRRTIIPRDYPDLNASEMHIYLINAGPRLLGA 215
Query: 66 FDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL-- 122
D++ H A L + GV ++ V D + LIL DG + ++W +G+ + +
Sbjct: 216 MDEKSSHKAEKALKELGVEIIADCRVTDYQNHSLILEDGDFIHAETVIWVSGIKANRIEG 275
Query: 123 --VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQG 179
V+S+ GGRI D + RV + +V+A+GD C + P LAQVA +Q
Sbjct: 276 IPVESI----GHGGRILTDSFNRVKGMTNVYAIGDQCLVEGDEAYPQGHPQLAQVALQQA 331
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+ L GR SA+ PFVYR+ G+MATIGR KA+V++ + L
Sbjct: 332 ANVARNL-----IAAGRGRSAR------PFVYRNPGTMATIGRKKAVVEIGK------LK 374
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
GF +WL+W +L ++ RN+ V +NW
Sbjct: 375 FGGFFAWLLWLVVHLRSILGVRNKTVVFLNW 405
>gi|393795833|ref|ZP_10379197.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Candidatus Nitrosoarchaeum limnia BG20]
Length = 452
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 142/289 (49%), Gaps = 35/289 (12%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSSFDD 68
+ L VVVGGG G+E +GEL D ++ D R+ Y + K+ I V ++EA IL F++
Sbjct: 162 RDSFLTFVVVGGGFAGIETAGELLDLLL-DARKHYHTIHKEDIRVIVLEALPMILPGFNE 220
Query: 69 RLRHYATTQLSKSGVRL--------VRGIVKDVDSQKLILNDGTE------VPYGLLVWS 114
+L ++ ++ + G+ + GI +V S L D + + L+W+
Sbjct: 221 KLAKFSKEKMIERGIDIRLKTAVTSFDGIEVNVKSLDENLKDSVDKNGIDSIRTKTLIWT 280
Query: 115 TGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
GV P +K + K+ G++ ++++L V VFA+GDC+ +++ AQ+
Sbjct: 281 AGVTPVNTIKR-SMLKTDKGKVIVNDFLEVTEFPGVFAIGDCALFMDPQTNRPYAPTAQL 339
Query: 175 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 234
AE Q K A K+ E FVY G MA IG+ +
Sbjct: 340 AEAQAKI----------AAYNLKALIKNFE-KKKFVYHSKGQMAIIGKRTGIATFL---- 384
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G++++GFL+WL+WR+ YL++V +F + ++W +F RDISR+
Sbjct: 385 --GMNISGFLAWLIWRNVYLSKVALPNKKFRIFLDWVIDILFDRDISRL 431
>gi|21244546|ref|NP_644128.1| NADH dehydrogenase [Xanthomonas axonopodis pv. citri str. 306]
gi|21110220|gb|AAM38664.1| NADH dehydrogenase [Xanthomonas axonopodis pv. citri str. 306]
Length = 430
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 140/272 (51%), Gaps = 23/272 (8%)
Query: 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDDRLRH 72
L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF + L
Sbjct: 163 LSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPRQARVRLVEAGPRVLPSFPEDLTA 222
Query: 73 YATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 131
A QL + GV + G V +D+ L D T VP +VW+ GV S L ++L +P
Sbjct: 223 KARKQLERLGVEVHTGTPVTQIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLGVPLD 281
Query: 132 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191
GR+ ++ L VP ++F GD + ++ G+ V P +A A++ GK+ I K
Sbjct: 282 RAGRVLVEADLSVPGHPEIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH-------IAK 332
Query: 192 AGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRS 251
A R + F Y+ G++ATIGR A+V + + L L+G ++W W +
Sbjct: 333 AIRARQRG----QTAPAFRYQDYGNLATIGRMAAIVHVGK------LKLSGVVAWWFWLA 382
Query: 252 AYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
A++ ++ +RNRF V VNWA + + +RI
Sbjct: 383 AHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 414
>gi|425770675|gb|EKV09143.1| Pyridine nucleotide-disulfide oxidoreductase, putative [Penicillium
digitatum Pd1]
gi|425771982|gb|EKV10410.1| Pyridine nucleotide-disulfide oxidoreductase, putative [Penicillium
digitatum PHI26]
Length = 570
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 157/344 (45%), Gaps = 79/344 (22%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L + E + LL+ +VG GPTG+E + L DFI D+ Y + + +TL + A +
Sbjct: 243 LPFTTPEMRKWLLNFAIVGAGPTGIELAASLRDFIYSDMMALYPSLNEMPKITLYDVAPK 302
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-----VRGI---------VKDVDSQK---LILNDGT 104
+LS FD+ L YA +++ G+ + V+ + +D ++ L +
Sbjct: 303 VLSMFDESLSRYAMETMTREGIDIKTSHHVKSLRWGAPGAPPPYHMDPKRCLTLTTEEDG 362
Query: 105 EVPYGLLVWSTGVG-PSTLVKSLD------------------LPKSP------------G 133
E+ G+ VW+TG G P + +SLD P++P
Sbjct: 363 ELGVGMCVWATGNGMPKFITESLDSVEAFPTDSVHSIEASSEAPQNPEIASWKFKKAPKN 422
Query: 134 GRIGIDEWLRV---------PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
G + +D LRV ++DVFA+GD + + G PA AQ ++ K+L
Sbjct: 423 GPLLVDGHLRVQLQNEAGQTAVLRDVFALGDNA--MPENGAP--PATAQATNQESKWLAD 478
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS----- 239
LN+ D+ PF +R+LG+MA IG +AL+ + N + S
Sbjct: 479 RLNK------------GDLAQTPPFSFRNLGTMAYIGDERALMQIPHNGDRASNSFLPEG 526
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G + L+W+ AY++ +SWRN+ VA W +FGRD+SR
Sbjct: 527 IKGRTASLIWKMAYISMSISWRNKLRVAFRWTLNKIFGRDVSRF 570
>gi|365989774|ref|XP_003671717.1| hypothetical protein NDAI_0H03010 [Naumovozyma dairenensis CBS 421]
gi|343770490|emb|CCD26474.1| hypothetical protein NDAI_0H03010 [Naumovozyma dairenensis CBS 421]
Length = 576
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/303 (34%), Positives = 159/303 (52%), Gaps = 40/303 (13%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDR 69
+++LL VVVGGGPTGVEF+ EL D++ D+ + I +TLIE A IL+SF+
Sbjct: 281 RAKLLKFVVVGGGPTGVEFAAELKDYVSEDLAAAMPEISKEIKLTLIEGAPNILNSFNKS 340
Query: 70 LRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG----TEVPYGLLVWSTGVGPSTLVK 124
L YA +KS + L ++ VK+V ++ +G E+PYG+LVW+TG P + K
Sbjct: 341 LVEYAQDVFAKSRIELKLKTQVKEVTKDYILAKNGGGEIEEIPYGVLVWATGNAPRDVTK 400
Query: 125 SL--DLPKSPGGRIG--IDEWLRVPSVQ-DVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
L LP+ R G I++ L++ + ++A+GDC+ + + P AQVA ++
Sbjct: 401 KLMTSLPEQQNSRRGLLINDKLQLLGAEGSIYAIGDCTFH-----PGLFPT-AQVAHQEA 454
Query: 180 KYL---FSLLNRIG----KAGGGRANSAKDMELGDP--------------FVYRHLGSMA 218
YL F+ LN+I K G + + P F Y HLG++A
Sbjct: 455 VYLADVFTKLNKIDQLNWKVQGEKQHEMTSKNDIKPLTKNVQKLPSTIEDFKYNHLGALA 514
Query: 219 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
IG KA+ DL SK S F ++L ++SAYL +S+RNR VA++W + GR
Sbjct: 515 YIGSEKAIADLSLG-SSKYYSTGSF-TFLFYKSAYLAMCLSFRNRILVALDWLKVSLLGR 572
Query: 279 DIS 281
D S
Sbjct: 573 DSS 575
>gi|5734587|emb|CAB52797.1| external rotenone-insensitive NADPH dehydrogenase [Solanum
tuberosum]
Length = 577
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 98/166 (59%), Gaps = 13/166 (7%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
+ G+SEEE+ LH V+VGGGPTGVEF+ EL D++ D+ + Y VKD++ +T+I++ +
Sbjct: 209 IPGLSEEERRTNLHFVIVGGGPTGVEFAAELHDYVYEDLVKIYPSVKDFVKITVIQSGDH 268
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLI------LNDGTEVPYGLLVWST 115
IL++FD+R+ +A + + G+ + G S I EVPYG++VWST
Sbjct: 269 ILNTFDERISSFAEQKFQRDGIEVSTGCRVTSVSDHFINMKVKSTGKHVEVPYGMVVWST 328
Query: 116 GVGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCS 157
GVG VK D + G + DEWLRV +V+A+GDC+
Sbjct: 329 GVGTRPFVK--DFMEQVGQEKRRILATDEWLRVKGCSNVYALGDCA 372
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 64/121 (52%), Gaps = 11/121 (9%)
Query: 168 LPALAQVAERQGKYLFSLLNRIGKA-----GGGRANSAKDMELGDPFVYRHLGSMATIGR 222
LPA AQVA +QG YL LNR + G R S+ E PF YRHLG A +G
Sbjct: 463 LPATAQVAAQQGTYLARCLNRWDQCKSNPEGPRRFKSSGRHEFL-PFEYRHLGQFAPLGG 521
Query: 223 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
+A +L + S G S WL W S Y ++ VSWR R+ V +W ++FGRD SR
Sbjct: 522 DQAAAELPGDWVSMGHST----QWL-WYSVYASKQVSWRTRYLVVGDWVRRYIFGRDSSR 576
Query: 283 I 283
I
Sbjct: 577 I 577
>gi|311744479|ref|ZP_07718280.1| pyridine nucleotide-disulfide oxidoreductase [Aeromicrobium marinum
DSM 15272]
gi|311312284|gb|EFQ82200.1| pyridine nucleotide-disulfide oxidoreductase [Aeromicrobium marinum
DSM 15272]
Length = 452
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 136/258 (52%), Gaps = 29/258 (11%)
Query: 28 EFSGELSDFIMRDVRQRYSHV-KDYIHVTLIE-ANEILSSFDDRLRHYATTQLSKSGVRL 85
E +G L++F D+ Y + + IH+TL+E A +L F ++LR YA L K V L
Sbjct: 174 ETAGALAEFRNDDMPTTYPELDRSRIHITLLEMAPHVLGPFHEKLRDYAKKSLEKRHVDL 233
Query: 86 VRGI-VKDVDSQKLILN-DGTE--VPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEW 141
G VK+V + +++ DG E +P G++VW+TGV V ++P+ GGR+ +DE
Sbjct: 234 RLGTAVKEVRADGVVVERDGVEEFLPAGIVVWATGVTAHPTVLDWNVPQGRGGRVEVDEH 293
Query: 142 LRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAK 201
RV + + FA+GD S G LP LAQ A + GK++ + K GR
Sbjct: 294 QRVKGLPNTFAIGDI-----SIGPDPLPQLAQPAIQGGKHVAKFIRAEIK---GRTVK-- 343
Query: 202 DMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS-LAGFLSWLVWRSAYLTRVVSW 260
PF Y G+MATIG+ A+ ++ KGL L GF +W++W ++ ++
Sbjct: 344 ------PFKYSDKGTMATIGKSSAIAEI------KGLPRLKGFPAWIIWVGLHVATLLGN 391
Query: 261 RNRFYVAVNWATTFVFGR 278
RNRF +N ++ ++F R
Sbjct: 392 RNRFATMINLSSKYLFRR 409
>gi|365986787|ref|XP_003670225.1| hypothetical protein NDAI_0E01660 [Naumovozyma dairenensis CBS 421]
gi|343768995|emb|CCD24982.1| hypothetical protein NDAI_0E01660 [Naumovozyma dairenensis CBS 421]
Length = 564
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 158/305 (51%), Gaps = 42/305 (13%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E+ +LL+ VVVGGGPTGVEF+ EL D++ +D+++ + + VTL+EA IL+ F
Sbjct: 270 DPERKKLLNFVVVGGGPTGVEFAAELQDYVRQDLKKWLPDISKEVKVTLVEALPNILNMF 329
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL--ILNDGTE-VPYGLLVWSTGVGPSTL 122
D L + L K + L ++ +VK VD + ++ND E +PYG+L+W+TG PS L
Sbjct: 330 DKSLIEHTEKFLKKEKINLKLKTMVKSVDDDNINAMVNDKVEKIPYGVLIWATGNAPSDL 389
Query: 123 VKSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL---AQVA 175
K L + SP G + ++ + +FA+GDC T P L AQVA
Sbjct: 390 CKGLMEQVEEQTSPRGLLINNQLQLLGFEDSIFALGDC---------TFHPGLFPTAQVA 440
Query: 176 ERQGKYL---FSLLNRIGKAG------GGRANSAKDMELGDP----------FVYRHLGS 216
++G YL F + +I + N +K + L D F Y H G+
Sbjct: 441 HQEGDYLADRFKTMYKIDQLKWKINHLDDVKNHSKKIRLSDKLTKLESKLQDFEYLHRGT 500
Query: 217 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 276
++ IG KA+V+L+ + +S G L+ W+SAYL S RNR VA +W + F
Sbjct: 501 LSYIGNEKAIVELKIGNSNYKIS--GPLAIWFWKSAYLNMCFSVRNRASVAFDWFKVYFF 558
Query: 277 GRDIS 281
GRD S
Sbjct: 559 GRDSS 563
>gi|329766193|ref|ZP_08257751.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Candidatus Nitrosoarchaeum limnia SFB1]
gi|329137252|gb|EGG41530.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Candidatus Nitrosoarchaeum limnia SFB1]
Length = 415
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 143/289 (49%), Gaps = 35/289 (12%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSSFDD 68
+ L VVVGGG G+E +GEL D ++ D R+ Y + K+ I V ++EA IL F++
Sbjct: 125 RDSFLTFVVVGGGFAGIETAGELLDLLL-DARKHYHTIRKEDIRVIVLEALPMILPGFNE 183
Query: 69 RLRHYATTQLSKSGV--RLVRGI---------VKDVDSQ---KLILNDGTEVPYGLLVWS 114
+L ++ +L + G+ RL + VK +D + N+ + L+W+
Sbjct: 184 KLAKFSKEKLIERGIDIRLKTAVTSFDGIEVNVKSLDENVKDSIDKNEIDSIRTKTLIWT 243
Query: 115 TGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
GV P +K + K+ G++ ++++L V VFA+GDC+ +++ AQ+
Sbjct: 244 AGVTPVNTIKR-SMLKTDKGKVIVNDFLEVTEFPGVFAIGDCALFMDPQTNRPYAPTAQL 302
Query: 175 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 234
AE Q K A K+ E FVY G MA IG+ +
Sbjct: 303 AEAQAKI----------AAYNLKALIKNFE-KKKFVYHSKGQMAIIGKRTGIATFL---- 347
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G++++GFL+WL+WR+ YL++V +F + ++W +F RDISR+
Sbjct: 348 --GMNISGFLAWLIWRNVYLSKVALPNKKFRIFLDWIIDILFDRDISRL 394
>gi|218886009|ref|YP_002435330.1| NADH dehydrogenase (ubiquinone) [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756963|gb|ACL07862.1| NADH dehydrogenase (ubiquinone) [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 452
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 145/279 (51%), Gaps = 27/279 (9%)
Query: 4 AGISEEEKSR--LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEA 59
A ++E+ R LL VVGGGPTGVEF+G L++ + + + + + K + L+EA
Sbjct: 157 ASLTEDPARRAALLTFTVVGGGPTGVEFAGALAELVRTPLARDFPELAGKTPPRIVLLEA 216
Query: 60 NE-ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV 117
+ +L+ F ++LR YA +L+ GV + R V +V + L DG + + W+ GV
Sbjct: 217 ADGLLTGFPEQLRTYARDRLALMGVEVRTRAGVAEVGPTDVRLGDGLRIATCTVAWTAGV 276
Query: 118 GPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
+ ++ LP GGR+ + L+V ++ VGD + G+ P +A A +
Sbjct: 277 RGHDVAAAMGLPVGRGGRVPVLPTLQVDGHPEIQVVGDLA---LPDGQNP-PMIAPNATQ 332
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
QG++ + + R+ K G + PF YR G+MATIGR A+V L +
Sbjct: 333 QGRHAAANVLRLLKGGTAK-----------PFRYRDKGAMATIGRQAAVVRLGR------ 375
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 276
+ +G +W++W +L ++ +RNR +V VNWA ++F
Sbjct: 376 FAFSGLWAWVLWLFVHLAYLIGFRNRLFVLVNWAWDYLF 414
>gi|390167435|ref|ZP_10219425.1| NADH dehydrogenase FAD-containing subunit [Sphingobium indicum
B90A]
gi|390168565|ref|ZP_10220523.1| NADH dehydrogenase FAD-containing subunit [Sphingobium indicum
B90A]
gi|389588807|gb|EIM66844.1| NADH dehydrogenase FAD-containing subunit [Sphingobium indicum
B90A]
gi|389589985|gb|EIM67991.1| NADH dehydrogenase FAD-containing subunit [Sphingobium indicum
B90A]
Length = 442
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 136/265 (51%), Gaps = 21/265 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEA-NEILSSF 66
++ L+ V+VG GPTGVE +G +++ + + + H+ + + L+EA +IL+SF
Sbjct: 154 HRRAELMTIVIVGAGPTGVEMAGAIAELAHYTLARDFRHIDPGAVRILLVEAGKQILASF 213
Query: 67 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
DRL YA +L GV ++ G ++D+D L++ G + G ++W+ G+ S
Sbjct: 214 PDRLSTYARRRLEAMGVEIMLGKSLEDIDGDTLVIG-GQRLRAGTIIWAAGIKASPAAFW 272
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
L GR+ + VPS + +GD + + G+ LPALAQVA++QG+YL
Sbjct: 273 LQAECDRSGRVRVAADFSVPSHPHIHVLGDSAAMNDEAGQP-LPALAQVAQQQGRYLGQS 331
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
L+R GRA PF +R G+ A IGR A+ D + + L G L+
Sbjct: 332 LSR---EFTGRAPLP-------PFRFRDRGNTAIIGRNAAIFDFGKRR------LKGRLA 375
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNW 270
WL+W ++ +V + R V++ W
Sbjct: 376 WLLWAIVHVYLLVGFEKRLLVSIQW 400
>gi|398391508|ref|XP_003849214.1| hypothetical protein MYCGRDRAFT_76066 [Zymoseptoria tritici IPO323]
gi|339469090|gb|EGP84190.1| hypothetical protein MYCGRDRAFT_76066 [Zymoseptoria tritici IPO323]
Length = 419
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 138/289 (47%), Gaps = 32/289 (11%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-E 61
+ GI+++E+ LLH +VVGGGPTGVE S E+SD D R Y H+ + + + +A
Sbjct: 155 VPGITDQEQRELLHIIVVGGGPTGVEISAEISDLYNHDFRLLYPHLAGKMTIAIHDAAPS 214
Query: 62 ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120
IL F+ L+ ++ S+ V+ ++ V+ + + G+++W+ G
Sbjct: 215 ILGDFEKALQKHSIESFSQRNVQTFTDSKIQKVERDSITTEGEGRIGCGMVLWTAGNKQC 274
Query: 121 TLVKSLDLPKSPG-GRIGIDEWLRV-----PSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
LV LD+ K+ RI DE+L V ++DV+A+GD + K LP A+V
Sbjct: 275 ALVDELDVSKTDKLPRIMTDEYLHVLDRDKKPMRDVYALGDAA----DIKKYFLPTTAEV 330
Query: 175 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 234
A ++ +YL LNR D + PFVY +A IG +V + N E
Sbjct: 331 AVQKAQYLVHALNR-------------DTDGQKPFVYGEKSIIAYIGGQDGVV--QGNSE 375
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G +W WR L+ +WR + + V W + G++I+R+
Sbjct: 376 -----WTGSRAWAAWRGKNLSWTRNWRRKLIIMVYWVLNYTGGKEIARL 419
>gi|340618247|ref|YP_004736700.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Zobellia galactanivorans]
gi|339733044|emb|CAZ96419.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase,
membrane [Zobellia galactanivorans]
Length = 425
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 136/278 (48%), Gaps = 37/278 (13%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSFD 67
E+ LL+ +VG GPTGVE +G ++ + Y H+ D + + L E +L
Sbjct: 156 ERKALLNFCIVGAGPTGVELAGAFAELKNNVFPKDYRHLNIDEMEINLFEGGPRVLPPMS 215
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV--------G 118
+ AT L GVR+ + I D D ++L L DGT + +W+ GV
Sbjct: 216 ENASKKATEFLKALGVRVHLNVIASDYDGERLTLKDGTTLNTKNFIWTAGVTGAAIEGFA 275
Query: 119 PSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTG-KTVLPALAQVAER 177
LV+ L+ R ++ + +V VFA+GD + Y+E+ G P +AQ A +
Sbjct: 276 THVLVERLN-------RYKVNRFNQVEGYDTVFAIGDIA-YMETDGFPKGHPQVAQPAIQ 327
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
QG+ L L R+ + K+++ PF YR G+MATIGR KA+ D+++
Sbjct: 328 QGELLADNLERMLEG--------KELK---PFTYRDKGTMATIGRNKAVADIKK------ 370
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
L AGF +W +W +L +V +RN+ V NWA ++
Sbjct: 371 LKFAGFFAWFIWMFVHLMALVGFRNKVVVFFNWAYNYI 408
>gi|378776612|ref|YP_005185049.1| NADH dehydrogenase transmembrane protein [Legionella pneumophila
subsp. pneumophila ATCC 43290]
gi|364507426|gb|AEW50950.1| NADH dehydrogenase transmembrane protein [Legionella pneumophila
subsp. pneumophila ATCC 43290]
Length = 752
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 135/273 (49%), Gaps = 32/273 (11%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN------ 60
SEEE+ + L+ V+VG GPTGVE +G +++ R+ VK++ H AN
Sbjct: 473 SEEERKQFLNFVIVGAGPTGVELAGAIAEL------ARFGIVKEFRHFDPASANIILVQA 526
Query: 61 --EILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV 117
IL +F +++ A L GV+ LV +V+ +DS +I+N + + W+ GV
Sbjct: 527 APRILPTFSEQISQKAQRYLESMGVKVLVNSMVEQIDSDGVIINK-ERIYSKSVFWAAGV 585
Query: 118 GPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
S K L L P GR+ +++ L V ++FA+GD + GK V P +A A++
Sbjct: 586 AASPASKWLQLEADPAGRVKVNDDLTVAGYSNIFAIGDTAASNAWNGKPV-PGIAPAAKQ 644
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
G Y+ ++++ R PF Y H GS+AT+GR A+ + + K
Sbjct: 645 GGAYVAKVISKRIYNNNSRYK---------PFKYIHYGSLATVGRKAAVAEFDRFK---- 691
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
++G L+W W ++ +V RNR V +NW
Sbjct: 692 --ISGELAWWFWGGVHVFFLVGSRNRLSVILNW 722
>gi|418751816|ref|ZP_13308088.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira santarosai
str. MOR084]
gi|409967545|gb|EKO35370.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira santarosai
str. MOR084]
Length = 422
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 146/284 (51%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN- 60
L+G E K+ LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA
Sbjct: 149 LSGDPEVVKA-LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEAAP 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L++FD L + +L GV ++ G V D+D + + L +G +P ++W+ GV
Sbjct: 208 RLLTTFDVSLGEFTKKRLESRGVEVLTGARVIDIDERGVQL-EGKMIPTQTVIWAAGVQA 266
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+++ +L GR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG
Sbjct: 267 NSIASTLGATLDRSGRVSVDEFCNIEGHPEVFVIGDIANYSKGLERP-LPGVSPVAMQQG 325
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+Y+ +L+ G N + PF Y GSMATIGR A+ + L
Sbjct: 326 RYVAALIQ------GDLKNKKR-----KPFRYVDKGSMATIGRTDAVAQMGV------LR 368
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G W W +L V ++N+ + + W +++ R +R+
Sbjct: 369 MKGLFGWFAWLFVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|237723110|ref|ZP_04553591.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229447632|gb|EEO53423.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 465
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 143/269 (53%), Gaps = 23/269 (8%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILS 64
+++E+ LL+ V+VGGG TG+E +G LS+ + Y + +++ LIEA +L+
Sbjct: 155 TKQEQQELLNIVIVGGGATGIEVAGILSEMKKFVLPNDYPDMPSSLMNIYLIEAGPRLLA 214
Query: 65 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+ +A L + GV L+ V D K++L DGTE+ +W +GV T +
Sbjct: 215 GMSEESSAHAEQFLREMGVNILLNKRVVDYRDHKVVLEDGTEIATRTFIWVSGVTGVT-I 273
Query: 124 KSLDLPK-SPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKY 181
+LD GGRI +D + RV + +VFA+GD C + P LAQVA +QG+
Sbjct: 274 GNLDASLIGRGGRIKVDSFNRVEGMNNVFAIGDQCIQLADENYPNGHPQLAQVAIQQGEL 333
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
L L R+ K ++M+ PF YR+LGSMAT+GR +A+ + + K +
Sbjct: 334 LAKNLIRMEK--------GQEMK---PFHYRNLGSMATVGRNRAVAEFSKVK------MQ 376
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
G+ +W++W +L ++ RN+ V +NW
Sbjct: 377 GWFAWVMWLVVHLRSILGVRNKVIVLLNW 405
>gi|418746409|ref|ZP_13302735.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira santarosai
str. CBC379]
gi|410792684|gb|EKR90613.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira santarosai
str. CBC379]
Length = 422
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 146/284 (51%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN- 60
L+G E K+ LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA
Sbjct: 149 LSGDPEVVKA-LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEAAP 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L++FD L + +L GV ++ G V D+D + + L +G +P ++W+ GV
Sbjct: 208 RLLTTFDVSLGEFTKKRLESRGVEVLTGARVIDIDERGVQL-EGKMIPTQTVIWAAGVQA 266
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+++ +L GR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG
Sbjct: 267 NSIASTLGATLDRSGRVSVDEFCNIEGHPEVFVIGDIANYSKGLERP-LPGVSPVAMQQG 325
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+Y+ +L+ G N + PF Y GSMATIGR A+ + L
Sbjct: 326 RYVAALIQ------GDLKNKKR-----KPFRYVDKGSMATIGRTDAVAQMGV------LR 368
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G W W +L V ++N+ + + W +++ R +R+
Sbjct: 369 MKGLFGWFAWLFVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|302843218|ref|XP_002953151.1| hypothetical protein VOLCADRAFT_63330 [Volvox carteri f.
nagariensis]
gi|300261538|gb|EFJ45750.1| hypothetical protein VOLCADRAFT_63330 [Volvox carteri f.
nagariensis]
Length = 387
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 119/190 (62%), Gaps = 9/190 (4%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L G SE+++ L+ VVVGGGPTGVEF+G LSDF+ D+R++Y + Y+ VTL+++ +
Sbjct: 163 LPGTSEQQRRAALNFVVVGGGPTGVEFAGTLSDFLREDLRKKYPALMPYVRVTLLQSVSS 222
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120
IL+ FD+RL+ A + L+ SGV + + V V+ K++L G E+ YG+ VWS G P
Sbjct: 223 ILTQFDERLQRNALSNLTSSGVEVRTNVRVVGVNKDKVLLKGGEELDYGVCVWSAGNAPR 282
Query: 121 TLVKSLDLPK---SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
LV + SPG ++ +D +LRV D+ A+GDCS L + LPA AQVA +
Sbjct: 283 PLVTQIASEASRLSPGSKLCVDSFLRVVGASDLLALGDCSLVLGNR----LPATAQVAGQ 338
Query: 178 QGKYLFSLLN 187
QG YL LLN
Sbjct: 339 QGAYLAHLLN 348
>gi|169768169|ref|XP_001818555.1| disulfide oxidoreductase [Aspergillus oryzae RIB40]
gi|83766411|dbj|BAE56553.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391870518|gb|EIT79699.1| NADH-dehydrogenase [Aspergillus oryzae 3.042]
Length = 417
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 140/289 (48%), Gaps = 33/289 (11%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L GISE + +LLH V+VGGGPTG+E + EL+D D+ + H+K V++I+ A +
Sbjct: 152 LPGISEARQRQLLHIVIVGGGPTGIEVAAELTDLFEGDLGILFPHLKGLTSVSVIDVAPQ 211
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120
IL+ FD RL YA + L + V++ + + +V + + YG+L+W+TG
Sbjct: 212 ILAPFDQRLSEYACSALKTNKVKVKLNCHIVNVTKDTIETRESGITGYGMLIWATGNRSI 271
Query: 121 TLVKSLDLPKSPGG--RIGIDEWLRVPS-----VQDVFAVGDCSGYLESTGKTVLPALAQ 173
LV L L K+ G RI D+ L V S + +VFA+GD + T LP A+
Sbjct: 272 PLVDQLQLRKTEHGLVRILTDDHLNVFSPDGNVIPNVFAMGDAADIEGGT----LPTTAE 327
Query: 174 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 233
VA ++ YL L N + KD PF Y+ + G + +V ++
Sbjct: 328 VAIQKADYLIRLFN----------SGLKDTR---PFKYQQRSLVTYTGAWDGVVQGQR-- 372
Query: 234 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
G+ +WL WRS SWR R + W ++ GR+I R
Sbjct: 373 -----EYTGYGAWLSWRSGNFFWTRSWRRRVLMCYAWFMDWLDGREIIR 416
>gi|110636675|ref|YP_676882.1| NADH dehydrogenase [Cytophaga hutchinsonii ATCC 33406]
gi|110279356|gb|ABG57542.1| NADH dehydrogenase [Cytophaga hutchinsonii ATCC 33406]
Length = 423
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 137/273 (50%), Gaps = 24/273 (8%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--IHVTLIE-ANEILS 64
+EE+ L + V+VGGGPTGVE +G ++ I R++ + D+ + + LIE + L+
Sbjct: 151 KEEQEALFNIVIVGGGPTGVELAGAFAE-IKRNILPKDYPGIDFTKLRIMLIEGSKNTLN 209
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
S + + L K GV + VK+ D + L++G +P L+W+ GV +T
Sbjct: 210 SMSELAHKASRMYLEKMGVEIQTELFVKNYDGKIAELSNGERIPTASLIWAAGVTTNTFD 269
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTV-LPALAQVAERQGKYL 182
D P RI +D V +V+AVGD + Y+E+ P LA VA Q K L
Sbjct: 270 GLEDSVYGPAKRIKVDRTSLVSGYANVYAVGDIA-YMETPKYPKGHPQLANVAINQAKNL 328
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
S L I K+ L + F Y+ LGSMATIG+ KA+VDL + G
Sbjct: 329 ASNLKAI----------QKNKTLTE-FEYKDLGSMATIGKNKAVVDL------PFIKFKG 371
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
F +WL W +L ++S +N+ + +NWA ++
Sbjct: 372 FFAWLTWMFVHLMLILSVKNKLIIFINWAWAYI 404
>gi|281426140|ref|ZP_06257053.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella oris
F0302]
gi|281399716|gb|EFB30547.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella oris
F0302]
Length = 424
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 139/272 (51%), Gaps = 21/272 (7%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILS 64
+E + L++ +VGGGP+GVE +G L++ + + Y + + + LI A +L
Sbjct: 155 NEARRQALMNIAIVGGGPSGVEIAGALAEMKRTILPRDYPDLDTSCMRIYLINAAPRLLG 214
Query: 65 SFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+ ++ H A L + GV ++ G +V D +LIL DG+ +P ++W +G+ + +
Sbjct: 215 AMAEKSSHEAEKALKELGVEIMAGCMVTDYVDHELILKDGSHLPVETVIWVSGIRANHID 274
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYL 182
GGRI D + RV +++V+A+GD C + P LAQVA +Q + L
Sbjct: 275 GIPAESIGRGGRIITDRFNRVKGMENVYAIGDQCLIEGDEAYPQGHPQLAQVAMQQAENL 334
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
L R K E PF YR+LG+MATIGR KA+V++ + L G
Sbjct: 335 AMNLKRQDKN-----------EQEHPFSYRNLGTMATIGRKKAVVEIGR------LKFGG 377
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
F +WL+W +L ++ RN+ V +NW ++
Sbjct: 378 FFAWLLWLVVHLRSILGVRNKTIVFLNWMWSY 409
>gi|332666957|ref|YP_004449745.1| NADH dehydrogenase (ubiquinone) [Haliscomenobacter hydrossis DSM
1100]
gi|332335771|gb|AEE52872.1| NADH dehydrogenase (ubiquinone) [Haliscomenobacter hydrossis DSM
1100]
Length = 432
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 141/281 (50%), Gaps = 41/281 (14%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEA-N 60
EE+ + V+VGGGPTGVE +G L++ MR +Y KDY I + LI++ +
Sbjct: 157 EERQGYIDIVIVGGGPTGVEIAGSLAE--MR----KYILPKDYPEMDCSEIEIFLIQSGD 210
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
++L D A L K V+++ V D + + + DGT + ++W+ G+
Sbjct: 211 QLLKGMSDEAAKKALQFLQKLDVKVILNNRVTSFDGELVTMKDGTTIRSRKVIWAAGILG 270
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTV--LPALAQVAER 177
+ PG R+ +++ +V +++V+A+GD + +E K P +AQVA +
Sbjct: 271 AIFEGFPAAAIGPGNRLVVNKHCQVLGMENVYALGDVA-LMEGDAKFPEGHPQVAQVAMQ 329
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKE 234
G+YL A S K + G P FVYR LGSMATIGR KA+VD
Sbjct: 330 MGEYL--------------AGSFKRKQQGKPIVPFVYRDLGSMATIGRNKAVVDF----- 370
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
G + GF +WLVW +L +++ RN+ V +NW +V
Sbjct: 371 -PGFKIQGFFAWLVWLFVHLYQLLGVRNKVMVFINWVWNYV 410
>gi|399044509|ref|ZP_10738112.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium sp. CF122]
gi|398056929|gb|EJL48909.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium sp. CF122]
Length = 423
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 141/276 (51%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VG GPTGVE +G + + + + + ++ V L+EA +L +F +
Sbjct: 153 RDALLTFTIVGAGPTGVELAGIIVELARNALPREFRNIDTRKTRVVLVEAGPRVLPTFAE 212
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L + GV L G V + + + ++G +P +VW+ G+ S K LD
Sbjct: 213 ELSAYAGKALEELGVELHIGERVLECTAAGVETSEGI-IPSRTIVWAAGIQASPAAKWLD 271
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ +++ L P DVF VGD + ++ +G V P +A A++QG Y ++
Sbjct: 272 VPADRAGRVIVEKDLTAPGFPDVFVVGDTASVIQESGAPV-PGIAPAAKQQGAYAAKVIR 330
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
A A PF YRH GS+ATIG+ A++D + K L G+++W
Sbjct: 331 ARLAAKPAPA----------PFRYRHQGSLATIGQSAAIIDFGRIK------LKGWIAWW 374
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 375 IWGIAHIYFLIGTRSRFAVAWSWLWIYLSGQHSARL 410
>gi|410448284|ref|ZP_11302367.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira sp.
Fiocruz LV3954]
gi|410017878|gb|EKO79927.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira sp.
Fiocruz LV3954]
gi|456875729|gb|EMF90924.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira santarosai
str. ST188]
Length = 422
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 146/284 (51%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN- 60
L+G E K+ LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA
Sbjct: 149 LSGDPEVVKA-LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEAAP 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L++FD L + +L GV ++ G V D+D + + L +G +P ++W+ GV
Sbjct: 208 RLLTTFDVSLGEFTKKRLESRGVEVLTGARVIDIDERGVQL-EGKMIPTQTVIWAAGVQA 266
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+++ +L GR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG
Sbjct: 267 NSIASTLGATLDRSGRVSVDEFCNIEGHPEVFVIGDIANYSKGLERP-LPGVSPVAMQQG 325
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+Y+ +L+ G N + PF Y GSMATIGR A+ + L
Sbjct: 326 RYVAALIQ------GDLKNKKR-----KPFRYVDKGSMATIGRTDAVAQMGV------LR 368
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G W W +L V ++N+ + + W +++ R +R+
Sbjct: 369 MKGLFGWFAWLFVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|359683573|ref|ZP_09253574.1| NADH dehydrogenase [Leptospira santarosai str. 2000030832]
gi|421113002|ref|ZP_15573457.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira santarosai
str. JET]
gi|422003522|ref|ZP_16350751.1| NADH dehydrogenase [Leptospira santarosai serovar Shermani str. LT
821]
gi|410801573|gb|EKS07736.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira santarosai
str. JET]
gi|417257741|gb|EKT87137.1| NADH dehydrogenase [Leptospira santarosai serovar Shermani str. LT
821]
Length = 422
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 146/284 (51%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN- 60
L+G E K+ LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA
Sbjct: 149 LSGDPEVVKA-LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEAAP 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L++FD L + +L GV ++ G V D+D + + L +G +P ++W+ GV
Sbjct: 208 RLLTTFDVSLGEFTKKRLESRGVEVLTGARVIDIDERGVQL-EGKMIPTQTVIWAAGVQA 266
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+++ +L GR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG
Sbjct: 267 NSIASTLGATLDRSGRVSVDEFCNIEGHPEVFVIGDIANYSKGLERP-LPGVSPVAMQQG 325
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+Y+ +L+ G N + PF Y GSMATIGR A+ + L
Sbjct: 326 RYVAALIQ------GDLKNKKR-----KPFRYVDKGSMATIGRTDAVAQMGV------LR 368
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G W W +L V ++N+ + + W +++ R +R+
Sbjct: 369 MKGLFGWFAWLFVHLFYQVGFKNKITILITWVWSYIAFRAEARV 412
>gi|298249569|ref|ZP_06973373.1| NADH dehydrogenase (ubiquinone) [Ktedonobacter racemifer DSM 44963]
gi|297547573|gb|EFH81440.1| NADH dehydrogenase (ubiquinone) [Ktedonobacter racemifer DSM 44963]
Length = 436
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 141/273 (51%), Gaps = 23/273 (8%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANE-ILSSF 66
E + LL V+VG GPTGVE +G +++ + + + H+ + + LIEA+E +LS+F
Sbjct: 170 ERQKELLTFVIVGAGPTGVEMAGAIAEVARKVLTSEFRHIDPSLARIVLIEAHEWVLSAF 229
Query: 67 DDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
++L H A +L + GV + + V +D + ++ N G + + W+ GV S
Sbjct: 230 PEKLSHRAERELRRLGVEICTKTFVTQIDERGVVAN-GERIQACTVFWTAGVQASPAANW 288
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
LD+ GR+ + E L VP +++VF +GD + + +LP +A VA +QG Y+ L
Sbjct: 289 LDVEADGAGRVPVAEDLSVPGLENVFVIGDTAAC--TWRGRLLPGVAPVAMQQGVYVARL 346
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
I GRA PF Y G++ATIGR A++ + + L L GF +
Sbjct: 347 ---IAARVAGRAM--------QPFHYVDKGNLATIGRGFAVLQMGR------LKLWGFPA 389
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
W++W ++ ++ + NR V + WA ++ R
Sbjct: 390 WVLWLLIHIYYLIGFENRILVLMQWAWAYITFR 422
>gi|413943311|gb|AFW75960.1| hypothetical protein ZEAMMB73_563877 [Zea mays]
Length = 584
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 101/166 (60%), Gaps = 13/166 (7%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE- 61
L ISEEEK ++LH VV+GGGPTGVEF+ E+ DF++ D+ + Y ++D + +T+I++ E
Sbjct: 212 LPNISEEEKRKILHFVVIGGGPTGVEFAAEMHDFLVEDLVKLYPAIQDLVKITIIQSAEH 271
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLIL----NDGTE--VPYGLLVWST 115
IL+ FD+R+ +A + + G+ + G S LI +DG E VPYG+ VWS
Sbjct: 272 ILTMFDERIASFAEQKFKRDGIEVCTGFRVIKVSDDLITMKRKSDGEELSVPYGMAVWSA 331
Query: 116 GVGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCS 157
G+G +V +D + G + +EWLRV + V+A+GDC+
Sbjct: 332 GIGTRPVV--MDFMQQIGQTNRRALATNEWLRVRECEGVYAIGDCA 375
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 169 PALAQVAERQGKYLFSLLNRIGKA-----GGGRANSAKDMELGDPFVYRHLGSMATIGRY 223
PA AQVA +QG+YL N++ K G R PF Y+H G A +G
Sbjct: 470 PATAQVAAQQGQYLAQCFNKMEKCREEPEGPLRMAGGSGRHFFRPFRYKHFGQFAPLGGE 529
Query: 224 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+A +L + S G S WL W S Y ++ VSWR R V +W F+FGRD SRI
Sbjct: 530 QAAAELPGDWVSMGHST----QWL-WYSVYASKQVSWRTRVLVVSDWTRRFIFGRDSSRI 584
>gi|289064121|gb|ADC80458.1| putative FAD-dependent pyridine nucleotide-disulphide
oxidoreductase [Comamonas testosteroni]
Length = 439
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 139/280 (49%), Gaps = 25/280 (8%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELS----DFIMRDVRQRYSHVKDYIHVTLIEANE-IL 63
+ ++ L V++GGGPTGVE +G ++ D + RD R S V LIEA + +L
Sbjct: 156 QRRAALQTFVIIGGGPTGVELAGTIAELARDTLARDFR---SIDPSTSRVVLIEAGQRLL 212
Query: 64 SSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
S F + L Y L K GV +V G S ++ G + +VW+ GV S
Sbjct: 213 SVFPEDLSAYTRQALEKLGVEVVLGTPVTECSADGVVYGGNPLSAKTIVWAAGVQASPAA 272
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
+ L GR+ + L V ++FA+GD + GK V P +A A++QGKY+
Sbjct: 273 RWLGAASDRAGRVVVGADLTVAGYPEIFAIGDTASCTMPDGKPV-PGIAPAAKQQGKYVA 331
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
SL+ R + G ++ A F YRH G++ATIGR A++D+ + K L G
Sbjct: 332 SLIGR--RLKGKPSDGA--------FKYRHQGNLATIGRSLAVIDMGRVK------LRGA 375
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W +W+ A++ ++ RNR VA++W G SRI
Sbjct: 376 FAWWIWKLAHIYFLIGTRNRLSVALSWVWNHSIGYRGSRI 415
>gi|300777989|ref|ZP_07087847.1| NADH dehydrogenase [Chryseobacterium gleum ATCC 35910]
gi|300503499|gb|EFK34639.1| NADH dehydrogenase [Chryseobacterium gleum ATCC 35910]
Length = 423
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 141/271 (52%), Gaps = 21/271 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSF 66
++ +L + V+ GGGPTGVE +G L++ ++ Y +K ++ LI+A +LS
Sbjct: 150 KQAEKLQNIVIAGGGPTGVELAGMLAEMGRYIAQKEYPEIKLGLSNLYLIDALPTLLSPM 209
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
+ A +L + GV++V + VKD K+IL+DG + L+W++GV +
Sbjct: 210 SKLAQKTAYEKLKELGVKIVLNVSVKDYTDNKVILSDGNIIETETLIWTSGVIGKEVPGL 269
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYL-ESTGKTVLPALAQVAERQGKYLFS 184
+ G RI +D + +V ++A+GD + L E P LAQVA +QGK L +
Sbjct: 270 PENSIGKGRRILVDAYNKVEGTNTIYALGDIALMLSEEKYPKGHPQLAQVAIQQGKNLAA 329
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
RI +D ++ +PF Y GSMA I +Y A+VDL ++ S GF+
Sbjct: 330 NFKRI-----------EDGKVLEPFHYNDKGSMAIISKYNAVVDLPKH------SFNGFI 372
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+WL W ++ +V ++N+ +AV+W F+
Sbjct: 373 AWLTWLFIHIIPLVGFKNKIQLAVDWFRLFI 403
>gi|359725878|ref|ZP_09264574.1| NADH dehydrogenase [Leptospira weilii str. 2006001855]
gi|417781937|ref|ZP_12429672.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira weilii
str. 2006001853]
gi|410777922|gb|EKR62565.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira weilii
str. 2006001853]
Length = 423
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 147/284 (51%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN- 60
L+G E K+ LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA
Sbjct: 149 LSGDPEVVKA-LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEAAP 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L +FD L + +L GV ++ G V D++ + + L +G +P G ++W+ GV
Sbjct: 208 RLLMTFDPSLGEFTKKRLESRGVEVLTGTRVIDINERGVQL-EGKMIPTGTVIWAAGVQA 266
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+ + +L + GGR+ +DE+ V +VF +GD + Y + + LP ++ VA +QG
Sbjct: 267 NGIASTLGVTLDRGGRVIVDEFCNVEGHPEVFVIGDIANYSKGLERP-LPGVSPVAMQQG 325
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+Y+ +L+ G R K F Y GSMATIGR A+ + L
Sbjct: 326 RYVAALIQ-----GDLRNKKRKS------FRYVDKGSMATIGRTDAVAQVGV------LK 368
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G WL W +L V ++N+ + + W +++ R +R+
Sbjct: 369 MKGLFGWLAWLFVHLFYQVGFKNKVTILITWVWSYIAFRAEARV 412
>gi|84625705|ref|YP_453077.1| NADH dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|84369645|dbj|BAE70803.1| NADH dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 430
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 23/272 (8%)
Query: 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDDRLRH 72
L VVGGGPTGVE +G L++ ++ + H+ V L+EA +L SF + L
Sbjct: 163 LSFAVVGGGPTGVELAGTLAEIARHTLKNEFRHIDPQQARVRLVEAGPRVLPSFPEDLTD 222
Query: 73 YATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 131
A QL + GV + V +D+ L D T VP +VW+ GV S L ++L +P
Sbjct: 223 KARKQLQRLGVEVHTSAPVTHIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLGVPLD 281
Query: 132 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191
GR+ ++ L VP ++F GD + ++ G+ V P +A A++ GK+ I K
Sbjct: 282 RAGRVLVEADLSVPGHPEIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH-------IAK 332
Query: 192 AGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRS 251
A R + F Y+ G++ATIGR A+V + + L L+G ++W W +
Sbjct: 333 AIRARHRG----QTAPAFRYQDYGNLATIGRMAAIVHVGK------LKLSGIVAWWFWLA 382
Query: 252 AYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
A++ ++ +RNRF V VNWA + + +RI
Sbjct: 383 AHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 414
>gi|413943310|gb|AFW75959.1| hypothetical protein ZEAMMB73_563877 [Zea mays]
Length = 577
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 101/166 (60%), Gaps = 13/166 (7%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE- 61
L ISEEEK ++LH VV+GGGPTGVEF+ E+ DF++ D+ + Y ++D + +T+I++ E
Sbjct: 205 LPNISEEEKRKILHFVVIGGGPTGVEFAAEMHDFLVEDLVKLYPAIQDLVKITIIQSAEH 264
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLIL----NDGTE--VPYGLLVWST 115
IL+ FD+R+ +A + + G+ + G S LI +DG E VPYG+ VWS
Sbjct: 265 ILTMFDERIASFAEQKFKRDGIEVCTGFRVIKVSDDLITMKRKSDGEELSVPYGMAVWSA 324
Query: 116 GVGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCS 157
G+G +V +D + G + +EWLRV + V+A+GDC+
Sbjct: 325 GIGTRPVV--MDFMQQIGQTNRRALATNEWLRVRECEGVYAIGDCA 368
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 169 PALAQVAERQGKYLFSLLNRIGKA-----GGGRANSAKDMELGDPFVYRHLGSMATIGRY 223
PA AQVA +QG+YL N++ K G R PF Y+H G A +G
Sbjct: 463 PATAQVAAQQGQYLAQCFNKMEKCREEPEGPLRMAGGSGRHFFRPFRYKHFGQFAPLGGE 522
Query: 224 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+A +L + S G S WL W S Y ++ VSWR R V +W F+FGRD SRI
Sbjct: 523 QAAAELPGDWVSMGHST----QWL-WYSVYASKQVSWRTRVLVVSDWTRRFIFGRDSSRI 577
>gi|357475923|ref|XP_003608247.1| External NADH-ubiquinone oxidoreductase [Medicago truncatula]
gi|87240748|gb|ABD32606.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase;
Calcium-binding EF-hand [Medicago truncatula]
gi|355509302|gb|AES90444.1| External NADH-ubiquinone oxidoreductase [Medicago truncatula]
Length = 578
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 96/165 (58%), Gaps = 10/165 (6%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L +S+EE+ R+LH +VGGGPTGVEF+ L DF+ D+ + Y VKD + +TL+EA
Sbjct: 206 LPSVSDEERKRILHFAIVGGGPTGVEFAAALHDFVSEDLVKLYPGVKDLVKITLLEAGGH 265
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQ---KLILNDG--TEVPYGLLVWS 114
ILS FD R+ +A + + G+ + G + K D + K + N G T +PYG+ VWS
Sbjct: 266 ILSMFDKRITTFAEDKFKRDGIDVKTGSMVTKVSDREITTKEMKNGGEITTIPYGMAVWS 325
Query: 115 TGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 157
TG+G +K R I DEWLRV +V+A+GDC+
Sbjct: 326 TGIGTRPFIKDFMTQIGQVNRRAIATDEWLRVEGTDNVYALGDCA 370
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 168 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 223
LPA AQVA +QG YL NR+ + + G PF Y+HLG A +G
Sbjct: 464 LPATAQVASQQGTYLAKCFNRMEECEKNPEGPIRFRGEGRHRFKPFRYKHLGQFAPLGGE 523
Query: 224 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ L + S G S WL W S Y ++ VSWR R V +W F+FGRD S+I
Sbjct: 524 QTAAQLPGDWVSIGHSS----QWL-WYSVYASKQVSWRTRALVVSDWMRRFIFGRDSSQI 578
>gi|363754103|ref|XP_003647267.1| hypothetical protein Ecym_6047 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890904|gb|AET40450.1| hypothetical protein Ecym_6047 [Eremothecium cymbalariae
DBVPG#7215]
Length = 540
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 157/300 (52%), Gaps = 33/300 (11%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
++ E+ RLL VVVGGGPTGVEF+ EL D++ +D+ + + I V L E IL+
Sbjct: 248 NDAERKRLLSFVVVGGGPTGVEFAAELQDYVDQDLSKWMPELSKEISVVLCEGLPNILNM 307
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG---TEVPYGLLVWSTGVGP-- 119
FD L YA + + L + +VK+V++ + G E+PYG+LVW+TG P
Sbjct: 308 FDKSLWQYAQDLFKEERIDLKLNTMVKNVNATHITTKCGDQIEELPYGVLVWATGNAPRE 367
Query: 120 --STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
+L+ L+ S G + D+ + + ++A+GDC+ Y + P AQVA +
Sbjct: 368 VSESLMNKLEEQNSRRGLLINDKLQLLGAKDSIYAIGDCTFY-----PGLFPT-AQVAHQ 421
Query: 178 QGKYLFSLLNRIGKAG--GGRANSAKDME--------------LGDPFVYRHLGSMATIG 221
QG+YL + + K +A + K +E L +PF Y H G++A IG
Sbjct: 422 QGEYLARVFKKQYKIDQIAWQAENCKSVEEKAKWCSKKDKLKTLVEPFKYNHQGALAYIG 481
Query: 222 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
KA+ DL ESK LAG ++L W+S+YL +S+RNR VA++W GRD S
Sbjct: 482 SDKAIADLAIG-ESK-YRLAGSWTFLFWKSSYLVMCLSFRNRILVALDWLKVSFLGRDSS 539
>gi|104781715|ref|YP_608213.1| PNDR family NADH dehydrogenase [Pseudomonas entomophila L48]
gi|95110702|emb|CAK15415.1| putative NADH dehydrogenase, PNDR family [Pseudomonas entomophila
L48]
Length = 430
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 142/277 (51%), Gaps = 21/277 (7%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEA-NEILSSFD 67
E++ L V++GGGPTGVE +G +++ + + + + V LIEA +L F
Sbjct: 158 ERAALQTFVIIGGGPTGVELAGTIAELAKGTLARDFRAIDPRATRVVLIEAGTRLLPVFP 217
Query: 68 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
++L Y L K GV + G V D ++ +++ G + ++W+ GV S + L
Sbjct: 218 EKLSDYTRRALEKLGVEVALGAPVTDCSAEGVVVA-GKPLQARTIIWAAGVQASPAARWL 276
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
GR+ + L VP ++F +GD + + GK V P +A A++QGKY+ +L+
Sbjct: 277 GAESDRAGRVLVRPDLSVPGRPEIFVIGDTAASAMADGKYV-PGIAPAAKQQGKYVANLV 335
Query: 187 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
R K + +PF Y+H G++ATIGR A++D+ + ++L G ++W
Sbjct: 336 KR----------HLKGKPVDEPFKYKHQGNLATIGRSLAVIDMGR------ITLRGAIAW 379
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W+ A++ ++ RNR VA++W G SR+
Sbjct: 380 WIWKLAHIYFLIGVRNRLSVALSWVWNHSVGYRGSRL 416
>gi|392380621|ref|YP_005029817.1| putative NADH dehydrogenase FAD-containing subunit transmembrane
protein [Azospirillum brasilense Sp245]
gi|356875585|emb|CCC96323.1| putative NADH dehydrogenase FAD-containing subunit transmembrane
protein [Azospirillum brasilense Sp245]
Length = 453
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 133/262 (50%), Gaps = 25/262 (9%)
Query: 14 LLHCVVVGGGPTGVEFSG---ELSDFIM-RDVRQRYSHVKDYIHVTLIEANE-ILSSFDD 68
L+ +VVGGGPTGVE +G EL+ F + RD R+ V L+EA ILS+F D
Sbjct: 167 LMTTIVVGGGPTGVEMAGAVAELARFTLARDFRRIDPRTA---RVLLVEAGPRILSTFPD 223
Query: 69 RLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 128
L YA +L + GV ++ G + + + G +P G +VW GV S L +
Sbjct: 224 DLGQYARRKLEELGVVVLTGQAVESITPEGATVGGRFIPAGAIVWGAGVKASPAGSWLGV 283
Query: 129 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 188
GRI +D + VP V DV+A+GD + GK LP LAQVA++QG++L
Sbjct: 284 ETDRSGRIPVDADMAVPGVPDVYALGDTAALAGDDGKP-LPGLAQVAKQQGEHL------ 336
Query: 189 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 248
GGG S + +PF +R+ G+ A +GR A+ D K L G+ +W++
Sbjct: 337 ----GGGLEASLLRGQPLEPFRFRNRGNTAIVGRSAAVFDFGTRK------LKGWFAWVL 386
Query: 249 WRSAYLTRVVSWRNRFYVAVNW 270
W ++ +V++ R V + W
Sbjct: 387 WAIVHVYLLVNFHKRMLVTMQW 408
>gi|402488487|ref|ZP_10835298.1| transmembrane NADH dehydrogenase [Rhizobium sp. CCGE 510]
gi|401812549|gb|EJT04900.1| transmembrane NADH dehydrogenase [Rhizobium sp. CCGE 510]
Length = 421
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 144/276 (52%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VG GPTGVE +G +++ + + + ++ V L+EA +L SF +
Sbjct: 153 RDALLTFTIVGAGPTGVELAGIIAELAHFTLPKEFRNIDTRKTRVVLVEAGPRVLPSFAE 212
Query: 69 RLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L K GV + G V D ++ + + + T V +VW+ GV S K L
Sbjct: 213 ELSAYAQKALEKLGVEVHLGKPVTDCNADGVKIGE-TFVASRTIVWAAGVTASPAAKWLG 271
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ +++ L P + DVF +GD + + GK V P +A A++QG Y+ ++
Sbjct: 272 VPADRAGRVVVEKDLTAPGLADVFVIGDTASVMREDGKPV-PGIAPAAKQQGGYVAKVIR 330
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ G A ++ F YRH GS+ATIG+ A++D + K L G+++W
Sbjct: 331 --ARLSGKPAPAS--------FRYRHQGSLATIGQSAAIIDFGRIK------LKGWIAWW 374
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 375 IWGLAHIYFLIGTRSRFSVAWSWLWIYLSGQHSARL 410
>gi|407647619|ref|YP_006811378.1| NADH dehydrogenase [Nocardia brasiliensis ATCC 700358]
gi|407310503|gb|AFU04404.1| NADH dehydrogenase [Nocardia brasiliensis ATCC 700358]
Length = 430
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 139/285 (48%), Gaps = 47/285 (16%)
Query: 4 AGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEI 62
AG EE + RLL VVVG G TGVE +G+L +++ +RY H + + VTL+E A E+
Sbjct: 155 AGADEETRRRLLSFVVVGAGATGVEVAGQL-----KELAKRYYHQE--VSVTLVEGAGEV 207
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGL----LVWSTGV 117
L F L YA L++SGV ++ G V D++ K+ + D + V +G+ +VWS GV
Sbjct: 208 LPPFGGGLSEYAKKSLTRSGVEVLLGTFVTDIEHGKVTVKDKSGVEHGIAAETVVWSAGV 267
Query: 118 GPSTLVKSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS---GYLESTGKTVLPA 170
K L + GR+ I+ L V D++A+GD + GY P
Sbjct: 268 QAGGFAKILAEATGVATDRAGRLLINPDLTVGGYADIYAIGDMTSLNGY---------PG 318
Query: 171 LAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLR 230
+ VA ++G++ ++ R A G F Y GSMA I R+ A+ L
Sbjct: 319 QSPVAMQEGRHAADIIRRKKPA-------------GTAFKYWDKGSMAVISRFSAVTKLT 365
Query: 231 QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
++ G L+W VW + +L +V +RNRF +W F+
Sbjct: 366 DK-----ITFRGVLAWFVWLAVHLFYLVGFRNRFAAVASWLVAFI 405
>gi|377575419|ref|ZP_09804413.1| putative NADH dehydrogenase [Mobilicoccus pelagius NBRC 104925]
gi|377535996|dbj|GAB49578.1| putative NADH dehydrogenase [Mobilicoccus pelagius NBRC 104925]
Length = 431
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 134/269 (49%), Gaps = 25/269 (9%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIE-ANEILS 64
++ ++ R +VVGGG TGVE +G L++ + Y + +D V L E A+ +++
Sbjct: 146 TQPDRERRFTVLVVGGGATGVEMAGTLAEMKSEAIPVVYPELSQDSFRVVLAEMADTLVA 205
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
FD RL+ Y QL K GV + G VK+V + DG+ + L++W++G G V
Sbjct: 206 PFDPRLQRYTLHQLRKRGVDIRLGTAVKEVRPDSVDFADGSTMDVDLVIWASGFGAHPEV 265
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
+P+ GGRI ++ L+V D++A+GD + +E + LP LAQ A + G ++
Sbjct: 266 SEWGMPQGRGGRIEVEPNLQVKGHPDIYAIGDAA--IEP--GSPLPQLAQPAMQMGSHV- 320
Query: 184 SLLNRIGKAGGGRANSAKDMELGD-PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
GR A D L PF Y G+MATIGR A+ G ++ G
Sbjct: 321 -----------GREIVAADKGLPPTPFGYDDKGTMATIGRNAAVAQF-----PSGRTVTG 364
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWA 271
F +W +W +L ++ RNR VN A
Sbjct: 365 FPAWALWVGVHLATLLGGRNRLQAMVNTA 393
>gi|392963239|ref|ZP_10328665.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans DSM
17108]
gi|421056797|ref|ZP_15519714.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans B4]
gi|421060884|ref|ZP_15523300.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans B3]
gi|421065621|ref|ZP_15527343.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans A12]
gi|421069382|ref|ZP_15530554.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Pelosinus fermentans A11]
gi|392437977|gb|EIW15839.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans B4]
gi|392450402|gb|EIW27455.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Pelosinus fermentans A11]
gi|392451063|gb|EIW28057.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans DSM
17108]
gi|392453647|gb|EIW30516.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans B3]
gi|392458482|gb|EIW35012.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans A12]
Length = 420
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 150/279 (53%), Gaps = 24/279 (8%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--IHVTLIEA-NEILSS 65
+++ LL V+VGGGPTGVE +G LS+ I + + Y H ++ + + L+EA +++ ++
Sbjct: 156 DKRRALLTFVIVGGGPTGVESAGALSELIYHVMVKEY-HTLNFKEVRIMLVEASDKLFAT 214
Query: 66 FDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
LR L + V + + V D + +K+ L G +P +VW+ GV ++L+
Sbjct: 215 MPKELRDATVETLIRKHVEVRLCVQVTDYNGEKMSLKGGEVIPTYTVVWAAGVKANSLID 274
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
+L + ++ R ++E+L++P+ +VF +GD + +++ G+ LP +A VA +Q +
Sbjct: 275 TLKVEQASMRRAIVNEFLQLPNRPEVFVIGDSAQFMQ--GERPLPMVAPVAIQQAEVTAK 332
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
+ + + K+++ F YR +G+MATIGR A+V + K GF+
Sbjct: 333 NIRSLIR--------GKELK---KFTYRDVGNMATIGRNAAVVHMGNFKTH------GFI 375
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W +W ++ R++ +RNR V V W ++ + RI
Sbjct: 376 AWAIWSFVHILRLIDFRNRAVVFVKWMWDYLVYERVVRI 414
>gi|58583917|ref|YP_202933.1| NADH dehydrogenase [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|58428511|gb|AAW77548.1| NADH dehydrogenase [Xanthomonas oryzae pv. oryzae KACC 10331]
Length = 470
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 138/272 (50%), Gaps = 23/272 (8%)
Query: 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDDRLRH 72
L VVGGGPTGVE +G LS+ ++ + H+ V L+EA +L SF + L
Sbjct: 203 LSFAVVGGGPTGVELAGTLSEIARHTLKNEFRHIDPQQARVRLVEAGPRVLPSFPEDLTD 262
Query: 73 YATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 131
A QL GV + V +D+ L D T VP +VW+ GV S L ++L +P
Sbjct: 263 KARKQLQHLGVEVHTSAPVTHIDALGYQLGD-TFVPARTVVWAAGVAASPLARTLGVPLD 321
Query: 132 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191
GR+ ++ L VP ++F GD + ++ G+ V P +A A++ GK+ I K
Sbjct: 322 RAGRVLVEADLSVPGHPEIFVGGDLAS-VQQDGRPV-PGVAPAAKQMGKH-------IAK 372
Query: 192 AGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRS 251
A R + F Y+ G++ATIGR A+V + + L L+G ++W W +
Sbjct: 373 AIRARHRG----QTAPAFRYQDYGNLATIGRMAAIVHVGK------LKLSGIVAWWFWLA 422
Query: 252 AYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
A++ ++ +RNRF V VNWA + + +RI
Sbjct: 423 AHVYFLIGFRNRFVVLVNWAMAYWSYQRAARI 454
>gi|392374757|ref|YP_003206590.1| NADH dehydrogenase FAD-containing subunit transmembrane protein
[Candidatus Methylomirabilis oxyfera]
gi|258592450|emb|CBE68759.1| putative NADH dehydrogenase FAD-containing subunit transmembrane
protein [Candidatus Methylomirabilis oxyfera]
Length = 442
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 133/273 (48%), Gaps = 19/273 (6%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDR 69
+ +LL VV G GP GVE + EL I + + Y I + L+ E IL F +
Sbjct: 158 RRQLLTFVVAGAGPCGVELAAELHHLIRTALLKFYPVDPSEIRIVLVSKGERILPDFAGK 217
Query: 70 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 128
L L K G+ + V ++ + LND +P +W+ GV P+ ++ L
Sbjct: 218 LADTGQQALIKRGIDVKSNTRVTGASAEYVELNDREIIPTRTTIWAAGVTPNPVLALLPA 277
Query: 129 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 188
KSP G I +DE+L++P +V+ +GD + ++ PALA VA RQG
Sbjct: 278 TKSPQGGIVVDEFLKIPEFPEVYVIGDGASVMDRRQGRPYPALAPVAIRQGI-------- 329
Query: 189 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 248
+A G N+ + +PF + G++ +G ALV+L G+ G L W +
Sbjct: 330 --RAAGNIMNTLQG-RAREPFRFDFTGNIVGLGCGMALVNL------LGIKFHGRLGWWL 380
Query: 249 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
+R A+L R+VS+RN+ +A+ A +F RDIS
Sbjct: 381 YRMAHLQRLVSFRNKASLALTLALNTIFDRDIS 413
>gi|429725051|ref|ZP_19259910.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella sp. oral
taxon 473 str. F0040]
gi|429151183|gb|EKX94059.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella sp. oral
taxon 473 str. F0040]
Length = 466
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 143/285 (50%), Gaps = 44/285 (15%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEA 59
SE E+ LL+ V+VGGG TGVE +G LS+ + Y KDY +++ LIEA
Sbjct: 155 SETERQELLNVVIVGGGATGVEVAGALSEM------KNYVLPKDYPDMPSSLMNIYLIEA 208
Query: 60 N-EILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV 117
+L + + L GV L+ +V D + ++IL DGT++ +W +GV
Sbjct: 209 GPRLLPAMSPPTSAHVEGFLRTMGVNVLLNKMVTDYQNHRVILKDGTQIATRTFIWVSGV 268
Query: 118 GPSTLVKSLDLPK--SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTG--KTVLPALAQ 173
T V +LD PK G RI +D + +V + VFA+GD E K P LAQ
Sbjct: 269 AGET-VGNLD-PKYLGRGRRIVVDAYNQVEGLDGVFAIGDQCIMPEGDPRWKGGHPQLAQ 326
Query: 174 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELG---DPFVYRHLGSMATIGRYKALVDLR 230
VA +QGK L A + K +E G PF Y++LG+MAT+GR +A+ +
Sbjct: 327 VAIQQGKLL--------------ARNLKALEKGKTLKPFRYKNLGAMATVGRNRAVAEFS 372
Query: 231 QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+ K +AGF +W +W +L ++ RN+ V +NW +V
Sbjct: 373 EVK------MAGFFAWFMWLIVHLRSILGIRNKSIVFLNWVWNYV 411
>gi|421077121|ref|ZP_15538092.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans JBW45]
gi|392524509|gb|EIW47664.1| Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding
domain-containing protein [Pelosinus fermentans JBW45]
Length = 420
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 147/278 (52%), Gaps = 22/278 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSF 66
+++ LL V+VGGGPTGVE +G LS+ I + + Y ++ + + L+EA +++ ++
Sbjct: 156 DKRRALLTFVIVGGGPTGVESAGALSELIYHVMVKEYHNMNFKEVRIMLVEASDKLFATM 215
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
LR L + V + + V D + +K+ L G +P +VW+ GV ++L+ +
Sbjct: 216 PKELRDATVETLIRKHVEVRLCVQVTDYNGEKMSLKGGEVIPTYTVVWAAGVKANSLLDT 275
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
L + ++ R ++E+L++P+ +VF +GD + +++ G+ LP +A VA +Q +
Sbjct: 276 LKVEQASMRRAIVNEFLQLPNRPEVFVIGDSAQFIQ--GERPLPMVAPVAIQQAEV---- 329
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
A + + EL F YR +G+MATIGR A+V + K GF++
Sbjct: 330 ------AAKNIRSLIRGKEL-KKFTYRDVGNMATIGRNAAVVHMGNFKTH------GFIA 376
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W +W ++ R++ +RNR V V W ++ + RI
Sbjct: 377 WAIWSFVHILRLIDFRNRAVVFVKWMWDYLVYERVVRI 414
>gi|444916942|ref|ZP_21237050.1| NADH dehydrogenase [Cystobacter fuscus DSM 2262]
gi|444711588|gb|ELW52527.1| NADH dehydrogenase [Cystobacter fuscus DSM 2262]
Length = 458
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 145/285 (50%), Gaps = 35/285 (12%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEA-NEILSSF 66
E ++ L V++GGGPTGVE +G +S + + + + + V L+E +L+ +
Sbjct: 159 ERQAEWLTFVIIGGGPTGVELAGAISYMLRHSLPRDFRRIDTAKARVLLLEGLPRVLTQY 218
Query: 67 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
+ L A L K GV + G +V VD + + + + +P ++W GV S LV+S
Sbjct: 219 PEELSATARKDLEKLGVEVHTGSMVTGVDERGVSVGE-QRIPARTVLWGAGVAASKLVRS 277
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
LD+P GR+ +D L VP +D+F +GD + ++ GK V P +A A + G+++
Sbjct: 278 LDVPLDKAGRVKVDPTLTVPGHEDIFVLGDVASLVQD-GKPV-PGIAPAAMQMGRHV--- 332
Query: 186 LNRIGKAGGGRANSAKDMELG------DPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
AK++ L PF Y GS A IGR A V L NK L
Sbjct: 333 --------------AKNIRLRLEGKPLRPFHYVDKGSFAVIGRGYA-VGLVFNK----LK 373
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF-GRDISRI 283
++G L+WL+W ++ +V +RNR V +NWA TF+ GRD+ I
Sbjct: 374 MSGPLAWLMWAGIHIAYLVGFRNRLAVMLNWAFTFLTRGRDVRLI 418
>gi|387907200|ref|YP_006337536.1| NADH dehydrogenase (quinone) [Blattabacterium sp. (Blaberus
giganteus)]
gi|387582093|gb|AFJ90871.1| NADH dehydrogenase (quinone) [Blattabacterium sp. (Blaberus
giganteus)]
Length = 432
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 136/272 (50%), Gaps = 18/272 (6%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILS 64
+++EK RL+ V+VGGGPTGVE +G L++ + Y + ++++ L++A + +L
Sbjct: 154 NDKEKKRLMTFVIVGGGPTGVELAGALAEMKKYVLPHDYPDLDIQHMNIHLLQATSRLLD 213
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
++ A L + GV + + +VKD + + + + ++ ++W+ GV + L
Sbjct: 214 GMSEQSAKQAYKNLKELGVIIWLNSLVKDYNGEVVFMEKNKKIESSNVIWAAGVKGAIL- 272
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTG-KTVLPALAQVAERQGKYL 182
K G RI +D +L+ ++FA+GD + E+ P AQ A +QG +L
Sbjct: 273 KGFIKEDVKGNRILVDNYLKTIKYNNIFAIGDVAYMNENKHYPNGHPMTAQPAIQQGNHL 332
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
LN + PFVY++LGSMATIGR KA+ D L L G
Sbjct: 333 AKNLNCFLFDNDNKTKM-------KPFVYKNLGSMATIGRNKAVCDFPY------LKLKG 379
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
FL+W+VW +L +V +RN+ NW +
Sbjct: 380 FLAWIVWMFVHLISLVGFRNKAIALTNWIIQY 411
>gi|302674238|ref|XP_003026804.1| hypothetical protein SCHCODRAFT_79659 [Schizophyllum commune H4-8]
gi|300100488|gb|EFI91901.1| hypothetical protein SCHCODRAFT_79659 [Schizophyllum commune H4-8]
Length = 574
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 160/320 (50%), Gaps = 49/320 (15%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
G S+ E RLLH VVVGGGPTGVE +GE DF+ D++ Y + I +TL+EA
Sbjct: 263 FPGQSDAEIDRLLHVVVVGGGPTGVEVAGEFHDFLEDDLKAWYPELAQRIRITLVEALPS 322
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILN----DGTEVPYGLLVWSTG 116
+L F +L Y +S + ++ + +VK+V + ++L EVP G++VW+ G
Sbjct: 323 VLPMFSKQLIDYTEESFKESKIDIMTKTMVKEVKDEAVVLQMPDKSIVEVPCGVVVWAAG 382
Query: 117 VGPS----TLVKSLDLPKSPGGRIGIDEWLRVP-SVQDVFAVGDCSGYLESTGKTVLPAL 171
L+K L + + +D++++V S +F++GD T T
Sbjct: 383 NRQRQITMNLMKKLGPEQDNRRGLTVDDYMQVKGSNGSIFSIGD-------TTATSYAPT 435
Query: 172 AQVAERQGKYLFSLLNRIGK------------AGGGRANSAKDMELGD------------ 207
AQVA ++G YL + +++GK A G+A ++ + E
Sbjct: 436 AQVASQEGAYLARVFSQMGKKDALERRLAELKAEEGKALASPEAEKVHKEEIESVQSAVQ 495
Query: 208 -----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRN 262
PF Y H GS+A IG KA+ DL + + G ++L WRSAYLT + S RN
Sbjct: 496 KVKIRPFSYSHQGSLAYIGSEKAIADL--PFMNGNFASGGMATYLFWRSAYLTTLFSLRN 553
Query: 263 RFYVAVNWATTFVFGRDISR 282
R VAV+W T VFGRD+SR
Sbjct: 554 RTLVAVDWMRTKVFGRDVSR 573
>gi|431798495|ref|YP_007225399.1| NADH dehydrogenase, FAD-containing subunit [Echinicola vietnamensis
DSM 17526]
gi|430789260|gb|AGA79389.1| NADH dehydrogenase, FAD-containing subunit [Echinicola vietnamensis
DSM 17526]
Length = 451
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 137/278 (49%), Gaps = 26/278 (9%)
Query: 4 AGISEEEKSR--LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEA- 59
A I+ + K R L + V+VGGGP GVE +G L++F + + Y I ++ LIEA
Sbjct: 168 AAITCDNKERDALTNFVIVGGGPAGVEMAGALAEFCKYILPKDYPEYPSSIMNIYLIEAI 227
Query: 60 NEILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVG 118
+E+LS+ D+ L V+ L+ V + D +++ G + L+W+ GV
Sbjct: 228 DELLSTMSDKASSKTLKYLEDLNVKVLLNEAVSNYDGKEVTTISGKTILAKNLIWTAGV- 286
Query: 119 PSTLVKSLDLPK-SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
+D G RI D L+V +++FA+GD + + P +AQ A +
Sbjct: 287 KGQFPNGIDEKHIVRGNRIKTDANLKVEGYENIFAIGDIAALISEERPKGHPQVAQAAIQ 346
Query: 178 QGKYL-FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
QGKYL S+LN I + PF Y+ GS+AT+G+ KA+ DL + K
Sbjct: 347 QGKYLGNSILNLINN------------KPTQPFEYKDKGSLATVGKRKAVADLGKFK--- 391
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
AG+ +WL+W +L + +RNR V NWA ++
Sbjct: 392 ---FAGYFAWLLWSVVHLMSISGFRNRLMVGFNWAVSY 426
>gi|398345855|ref|ZP_10530558.1| NADH dehydrogenase [Leptospira broomii str. 5399]
Length = 434
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 147/281 (52%), Gaps = 24/281 (8%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILS 64
++E LL+ V++GGGPTGVE +G +++ VR + + + +TLIEA+ +L
Sbjct: 154 NKEIAKSLLNYVIIGGGPTGVELAGSIAELSHEIVRNEFHTIDPALSKITLIEASPRLLM 213
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+F L +A T+L K GV ++ G V ++D + + L DG + ++W+ GV + +
Sbjct: 214 AFHPNLSEFAKTRLEKRGVEVLVGTKVINIDEEGVHL-DGCTIRSSNIIWAAGVQANAIS 272
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
++L +P GR+ +DE+ + +VF +GD + + ++ + LP ++ VA +QG+Y
Sbjct: 273 QALGVPLDRTGRVMVDEYCNIEGHPEVFVIGDIANFTKNLERP-LPGVSPVAMQQGRYAA 331
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL-SLAG 242
SL+ G G + + F Y GSMATIGR A+ + GL L G
Sbjct: 332 SLI--FGDLKGKKRSI---------FKYVDKGSMATIGRQDAVAQV-------GLWRLKG 373
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
F W W +L V ++N+ + + W +++ R +R+
Sbjct: 374 FFGWAAWLFVHLFYQVGFKNKVSILITWFWSYLTFRAEARL 414
>gi|440227018|ref|YP_007334109.1| NADH dehydrogenase protein [Rhizobium tropici CIAT 899]
gi|440038529|gb|AGB71563.1| NADH dehydrogenase protein [Rhizobium tropici CIAT 899]
Length = 420
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 139/276 (50%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL V+VG GPTGVE +G +S+ + + + ++ + L+EA +L +F
Sbjct: 153 REALLTFVIVGAGPTGVELAGIISELARTTLPKEFRNIDTRKAKIILVEAGPRVLPAFAQ 212
Query: 69 RLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA +L GV + G V ++ + + D T VP +VW+ GV S K L
Sbjct: 213 ELSDYAHKELELLGVDVRFGRPVTSCTAEGVTIGD-TFVPCRTIVWAAGVEASPAAKWLG 271
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR +D+ LR P ++D+F +GD + + G V P +A A++QG Y+ +
Sbjct: 272 IPADRAGRAIVDKDLRAPGMEDIFIIGDTAAVMRDDGSPV-PGIAPAAKQQGAYVAKV-- 328
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
I GR + PF YRH GS+ATIG+ A++D + L G+L+W
Sbjct: 329 -IKAKLAGRPSPG-------PFHYRHQGSLATIGKSAAIIDF------GWIKLKGWLAWW 374
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
VW A++ ++ R R VA +W ++ + +R+
Sbjct: 375 VWGLAHIYFLIGVRWRIAVAWSWLWIYISRQHSARL 410
>gi|163848888|ref|YP_001636932.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Chloroflexus aurantiacus J-10-fl]
gi|163670177|gb|ABY36543.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Chloroflexus aurantiacus J-10-fl]
Length = 455
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 143/280 (51%), Gaps = 23/280 (8%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEANE-ILSSF 66
+++ LL VVGGGPTGVE +G + I +R Y + V LIEA + IL+SF
Sbjct: 172 DKRMALLTFAVVGGGPTGVELAGAFVELIRHVIRHDYPMLDVRQARVVLIEATDRILASF 231
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
D L+ A +L + GV + + V D D+ L DG+ + +VW+ GV + L +
Sbjct: 232 PDSLQQAALHRLQRMGVEVRLNTPVADADTNGLRFRDGSSLAAKTVVWAAGVRGAPLADA 291
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTV-LPALAQVAERQGKYLFS 184
L + G R+ + L +P VF +GD + YLE V P +A VA + G+ +
Sbjct: 292 LGVTLGRGARVVVTPQLTLPDDDRVFVIGDMA-YLEGYRPGVAYPMVAPVAIQMGEQ--A 348
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
N + + G + M+ PF Y G MATIGR A++D + G+ L+G+L
Sbjct: 349 ARNILAQIDG------RPMQ---PFQYHDKGQMATIGRSAAVLD------AFGVRLSGWL 393
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWA-TTFVFGRDISRI 283
+W+ W +L +V +RNR V +NWA + F + R + I
Sbjct: 394 AWVGWLFVHLMALVGFRNRALVLLNWAYSYFTYDRGVRLI 433
>gi|417102976|ref|ZP_11960901.1| NADH dehydrogenase protein [Rhizobium etli CNPAF512]
gi|327191444|gb|EGE58466.1| NADH dehydrogenase protein [Rhizobium etli CNPAF512]
Length = 421
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 138/275 (50%), Gaps = 19/275 (6%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDD 68
+ LL +VG GPTGVE +G +++ + + + ++ V L+EA +L +F +
Sbjct: 153 RDALLTFTIVGAGPTGVELAGIIAELAHFTLPKEFRNIDTRKTRVVLVEAGPRVLPAFAE 212
Query: 69 RLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 128
L YA L K GV + G S + T +P +VW+ GV S + L +
Sbjct: 213 ELSAYAEKALEKLGVEIHLGKPVTECSADGVRIGETFIPSRTIVWAAGVTASPAARWLGV 272
Query: 129 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 188
P GR+ ++ L P + DVF +GD + + GK V P +A A++QG Y+ ++
Sbjct: 273 PADRAGRVVVERDLSAPGLPDVFVIGDTAFVMREDGKPV-PGIAPAAKQQGGYVAKVIR- 330
Query: 189 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 248
+ G A + PF Y H GS+ATIG+ A++D + K L G+++W +
Sbjct: 331 -ARLSGKPAPA--------PFKYWHQGSLATIGQSAAIIDFGRIK------LKGWIAWWI 375
Query: 249 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W A++ ++ R+RF VA NW ++ G+ +R+
Sbjct: 376 WGLAHIYFLIGTRSRFTVAWNWLWIYLSGQHSARL 410
>gi|406576155|ref|ZP_11051822.1| NADH dehydrogenase [Janibacter hoylei PVAS-1]
gi|404554434|gb|EKA59969.1| NADH dehydrogenase [Janibacter hoylei PVAS-1]
Length = 456
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 139/282 (49%), Gaps = 41/282 (14%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSF 66
E++ RLL VVVG GPTGVE +G++++ + + + H+ +D + L A ++L SF
Sbjct: 158 EDRERLLTFVVVGAGPTGVEMAGQIAELSHKTLAHEFRHINPRDARVILLDGAPQVLPSF 217
Query: 67 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILND--GT--EVPYGLLVWSTGVGPST 121
DRL L K GV + G +V +VD + + D GT + VW+ GV S
Sbjct: 218 GDRLGGKTRASLEKRGVEVQLGAMVTEVDGTGIEVKDKDGTVRRIEAMTKVWAAGVAASP 277
Query: 122 LVKSLDLPKSP----GGRIGIDEWLRVPSVQDVFAVGDC---SGYLESTGKTVLPALAQV 174
L K + GR+ ++E L V ++F VGD GY P +AQ+
Sbjct: 278 LGKMIADQAGAEVDRAGRVHVEEDLTVKGHPEIFLVGDMINLKGY---------PGVAQL 328
Query: 175 AERQGKYLF-SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 233
A + G+Y +L R+ + E PFVY+ GSMATI +Y A+ + +
Sbjct: 329 AIQGGRYAAKEILGRL-----------EGKEPQAPFVYKDKGSMATISKYSAVASIGK-- 375
Query: 234 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+ L GF++WL W + +L +V ++NR +NW TFV
Sbjct: 376 ----IKLTGFIAWLAWLAVHLMAMVGFKNRISTLLNWIITFV 413
>gi|222526844|ref|YP_002571315.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Chloroflexus sp. Y-400-fl]
gi|222450723|gb|ACM54989.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Chloroflexus sp. Y-400-fl]
Length = 446
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 143/280 (51%), Gaps = 23/280 (8%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEANE-ILSSF 66
+++ LL VVGGGPTGVE +G + I +R Y + V LIEA + IL+SF
Sbjct: 163 DKRMALLTFAVVGGGPTGVELAGAFVELIRHVIRHDYPMLDVRQARVVLIEATDRILASF 222
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
D L+ A +L + GV + + V D D+ L DG+ + +VW+ GV + L +
Sbjct: 223 PDSLQQAALHRLQRMGVEVRLNTPVADADTNGLRFRDGSSLAAKTVVWAAGVRGAPLADA 282
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTV-LPALAQVAERQGKYLFS 184
L + G R+ + L +P VF +GD + YLE V P +A VA + G+ +
Sbjct: 283 LGVTLGRGARVVVTPQLTLPDDDRVFVIGDMA-YLEGYRPGVAYPMVAPVAIQMGEQ--A 339
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
N + + G + M+ PF Y G MATIGR A++D + G+ L+G+L
Sbjct: 340 ARNILAQIDG------RPMQ---PFQYHDKGQMATIGRSAAVLD------AFGVRLSGWL 384
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWA-TTFVFGRDISRI 283
+W+ W +L +V +RNR V +NWA + F + R + I
Sbjct: 385 AWVGWLFVHLMALVGFRNRALVLLNWAYSYFTYDRGVRLI 424
>gi|226366452|ref|YP_002784235.1| NADH dehydrogenase [Rhodococcus opacus B4]
gi|226244942|dbj|BAH55290.1| NADH dehydrogenase [Rhodococcus opacus B4]
Length = 464
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 143/279 (51%), Gaps = 35/279 (12%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSFD 67
E++RLL VVVG GPTGVE +G++++ R + + ++ ++ + L A+++L +
Sbjct: 162 ERARLLTFVVVGAGPTGVELAGQIAELSRRTLSGAFRNIDPREARVILLDGADDVLPVYG 221
Query: 68 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLIL--NDGTE--VPYGLLVWSTGVGPSTL 122
+L A QL K GV + G +V DVD L++ DGT + VWS GV S L
Sbjct: 222 GKLSRKARQQLEKLGVEIQLGAMVTDVDVDGLVVKDKDGTHRRIESQCKVWSAGVQASPL 281
Query: 123 VKSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 178
K + D GR+ ++ L VP DVF +GD + S K LP LAQVA +
Sbjct: 282 GKQIADQSDAEIDRAGRVMVNPDLSVPGHPDVFVIGD----MMSLDK--LPGLAQVAMQG 335
Query: 179 GKYLFSLLNRIGKAG--GGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
GKY + KAG GG+ PF Y GSMATI R+ A+ + +
Sbjct: 336 GKYAAKQI----KAGLNGGKPEDRP------PFKYFDKGSMATISRFSAVAKVGK----- 380
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
L ++GF+ W+ W + +L +V +R+R ++W TF+
Sbjct: 381 -LEISGFIGWVAWLAIHLMYLVGFRSRLSTLLSWTVTFL 418
>gi|356557658|ref|XP_003547132.1| PREDICTED: probable NADH dehydrogenase-like [Glycine max]
Length = 576
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 96/165 (58%), Gaps = 10/165 (6%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L +SE+EK R+LH +VGGGPTGVEF+ L DF+ D+ + Y +KD + +TL+EA +
Sbjct: 204 LPDVSEDEKKRILHFAIVGGGPTGVEFAASLHDFVNEDLLRLYPGIKDLVKITLLEAGDH 263
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLI----LNDGTE---VPYGLLVWS 114
IL FD R+ +A + + G+ + G + S+K I L +G E +PYG+ VWS
Sbjct: 264 ILGMFDKRITTFAEDKFRRDGIDVKTGSMVVKVSEKEISTKELKNGGEIKTIPYGMAVWS 323
Query: 115 TGVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 157
TG+G +K R + DEWLRV +V+A+GDC+
Sbjct: 324 TGIGTRPFIKDFMAQIGQASRRALATDEWLRVEGCSNVYALGDCA 368
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 168 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG----DPFVYRHLGSMATIGRY 223
LPA AQVA +QG YL NR+ + + G PF Y+HLG A +G
Sbjct: 462 LPATAQVASQQGTYLAKCFNRMEECEKNPEGPLRFRGEGHHRFKPFRYKHLGQFAPLGGE 521
Query: 224 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ L + S G S WL W S Y ++ VSWR R V +W F+FGRD S I
Sbjct: 522 QTAAQLPGDWVSIGHSS----QWL-WYSVYASKQVSWRTRALVVSDWTRRFIFGRDSSSI 576
>gi|393783999|ref|ZP_10372168.1| hypothetical protein HMPREF1071_03036 [Bacteroides salyersiae
CL02T12C01]
gi|392667658|gb|EIY61165.1| hypothetical protein HMPREF1071_03036 [Bacteroides salyersiae
CL02T12C01]
Length = 434
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 133/269 (49%), Gaps = 20/269 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSF 66
+E+ +L+ ++VGGG TG+E SG L++ + Q Y + + + LI+A + +LS+F
Sbjct: 160 KEREKLMTFIIVGGGATGIELSGALAEMRKFILPQDYPDLDMKKMRIVLIDAGSRLLSAF 219
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
++ L K GV + V V D ++ L L DGT +P + W GV ++L
Sbjct: 220 SEKSSEEVRDYLQKKGVEVKVNSKVVDYENDLLTLGDGTVLPSANIYWVAGVKANSLEGL 279
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
PG R+ +D + +V +FA+GD + + P + Q A +Q + L
Sbjct: 280 PADAYGPGNRLKVDTFNKVSGNDHIFAIGDTALMISEDYPRGHPQVVQPAIQQARLLVRN 339
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
LN I K + PFVY + GSMAT+GR A+V+L K + GFL+
Sbjct: 340 LNNIEKGLPLK-----------PFVYHNKGSMATVGRNNAIVEL------KNIRFGGFLA 382
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
W VW +L +V +N+ ++ +W ++
Sbjct: 383 WAVWLFIHLMSIVGVKNKLFIFTDWMWSY 411
>gi|52840908|ref|YP_094707.1| NADH dehydrogenase transmembrane protein [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|52628019|gb|AAU26760.1| NADH dehydrogenase transmembrane protein [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
Length = 738
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 32/273 (11%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN------ 60
S+EE+ + L+ V+VG GPTGVE +G +++ R+ VK++ H AN
Sbjct: 459 SDEERKQFLNFVIVGAGPTGVELAGAIAEL------ARFGIVKEFRHFDPASANIILVQA 512
Query: 61 --EILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV 117
IL +F +++ A L GV+ LV +V+ +DS +I+N + + W+ GV
Sbjct: 513 APRILPTFSEQISQKAQRYLESMGVKVLVNSMVEQIDSDGVIINK-ERIYSKSVFWAAGV 571
Query: 118 GPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
S K L L P GR+ +++ L V ++FA+GD + GK V P +A A++
Sbjct: 572 AASPASKWLQLEADPAGRVKVNDDLTVAGYSNIFAIGDTAASNAWNGKPV-PGIAPAAKQ 630
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
G Y+ ++++ R PF Y H GS+AT+GR A+ + + K
Sbjct: 631 GGAYVAKVISKRIYNNNSRYK---------PFKYIHYGSLATVGRKAAVAEFDRFK---- 677
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
++G L+W W ++ +V RNR V +NW
Sbjct: 678 --ISGELAWWFWGGVHVFFLVGSRNRLSVILNW 708
>gi|54296696|ref|YP_123065.1| hypothetical protein lpp0727 [Legionella pneumophila str. Paris]
gi|397663239|ref|YP_006504777.1| putative NADH dehydrogenase [Legionella pneumophila subsp.
pneumophila]
gi|53750481|emb|CAH11875.1| hypothetical protein lpp0727 [Legionella pneumophila str. Paris]
gi|395126650|emb|CCD04833.1| putative NADH dehydrogenase [Legionella pneumophila subsp.
pneumophila]
Length = 738
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 32/273 (11%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN------ 60
S+EE+ + L+ V+VG GPTGVE +G +++ R+ VK++ H AN
Sbjct: 459 SDEERKQFLNFVIVGAGPTGVELAGAIAEL------ARFGIVKEFRHFDPASANIILVQA 512
Query: 61 --EILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV 117
IL +F +++ A L GV+ LV +V+ +DS +I+N + + W+ GV
Sbjct: 513 APRILPTFSEQISQKAQRYLESMGVKVLVNSMVEQIDSDGVIINK-ERIYSKSVFWAAGV 571
Query: 118 GPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
S K L L P GR+ +++ L V ++FA+GD + GK V P +A A++
Sbjct: 572 AASPASKWLQLEADPAGRVKVNDDLTVAGYSNIFAIGDTAASNAWNGKPV-PGIAPAAKQ 630
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
G Y+ ++++ R PF Y H GS+AT+GR A+ + + K
Sbjct: 631 GGAYVAKVISKRIYNNNSRYK---------PFKYIHYGSLATVGRKAAVAEFDRFK---- 677
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
++G L+W W ++ +V RNR V +NW
Sbjct: 678 --ISGELAWWFWGGVHVFFLVGSRNRLSVILNW 708
>gi|456862519|gb|EMF81062.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira weilii
serovar Topaz str. LT2116]
Length = 423
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 146/284 (51%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN- 60
L+G E K+ LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA
Sbjct: 149 LSGDPEVVKA-LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEAAP 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L +FD L + +L GV ++ G V D++ Q + L +G +P ++W+ GV
Sbjct: 208 RLLMTFDPSLGEFTKKRLESRGVEVLTGTRVIDINEQGVQL-EGKMIPTETVIWAAGVQA 266
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+ + +L + GGR+ +DE+ V +VF +GD + Y + + LP ++ VA +QG
Sbjct: 267 NGIASTLGVTLDRGGRVIVDEFCNVEGHPEVFVIGDIANYSKGLERP-LPGVSPVAMQQG 325
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+Y+ +L+ G N + F Y GSMATIGR A+ + L
Sbjct: 326 RYVAALIQ------GDLKNKKR-----KSFRYVDKGSMATIGRTDAVAQVGV------LK 368
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G WL W +L V ++N+ + + W +++ R +R+
Sbjct: 369 MKGLFGWLAWLFVHLFYQVGFKNKVTILITWVWSYIAFRAEARV 412
>gi|50305045|ref|XP_452480.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641613|emb|CAH01331.1| KLLA0C06336p [Kluyveromyces lactis]
gi|62868400|emb|CAD43036.2| putative NADH dehydrogenase (ubiquinone) [Kluyveromyces lactis]
Length = 519
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 158/309 (51%), Gaps = 39/309 (12%)
Query: 2 FLAGIS--------EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 53
FLA I + E+ RLL VVVGGGPTGVE +GEL D++ +D+++ + + +
Sbjct: 214 FLANIEKANLLPKGDPERKRLLTIVVVGGGPTGVETAGELQDYVDQDLKRFMPSIAEEVQ 273
Query: 54 VTLIEA-NEILSSFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILN----DG--TE 105
+ L+EA +L+ F+ +L YA LSK+ + L+ R V V+ LI DG TE
Sbjct: 274 IHLVEALPNVLNMFEKKLTSYAQDVLSKTNINLMLRTAVGKVEKDHLIAKTKDADGNVTE 333
Query: 106 --VPYGLLVWSTGVGPSTLV----KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGY 159
VPYG L+W+TG +V K + + + +DE L V ++FA+GD +
Sbjct: 334 QTVPYGTLIWATGNKARPIVTDLFKKITEQNASTRALNVDEHLLVKGSNNIFAIGDNAF- 392
Query: 160 LESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD---------PFV 210
LP AQVA +Q +YL + +++ K G + A E D PF
Sbjct: 393 ------AGLPPTAQVAHQQAEYLAKVFDKMAKIPGFQQELATRKEKIDLLFEENGFKPFK 446
Query: 211 YRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
Y HLG++A +G KA+ ++ K S + G +++ +WR Y+ ++S R+RF V +W
Sbjct: 447 YVHLGALAYLGAEKAIANITYGKRS-FYTGGGLITFYIWRVLYVGMILSARSRFKVIADW 505
Query: 271 ATTFVFGRD 279
F RD
Sbjct: 506 LKLAFFKRD 514
>gi|397666349|ref|YP_006507886.1| putative NADH dehydrogenase [Legionella pneumophila subsp.
pneumophila]
gi|395129760|emb|CCD07993.1| putative NADH dehydrogenase [Legionella pneumophila subsp.
pneumophila]
Length = 738
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 32/273 (11%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN------ 60
S+EE+ + L+ V+VG GPTGVE +G +++ R+ VK++ H AN
Sbjct: 459 SDEERKQFLNFVIVGAGPTGVELAGAIAEL------ARFGIVKEFRHFDPASANIILVQA 512
Query: 61 --EILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV 117
IL +F +++ A L GV+ LV +V+ +DS +I+N + + W+ GV
Sbjct: 513 APRILPTFSEQISQKAQRYLESMGVKVLVNSMVEQIDSDGVIINK-ERIYSKSVFWAAGV 571
Query: 118 GPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
S K L L P GR+ +++ L V ++FA+GD + GK V P +A A++
Sbjct: 572 AASPASKWLQLEADPAGRVKVNDDLTVAGYSNIFAIGDTAASNAWNGKPV-PGIAPAAKQ 630
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
G Y+ ++++ R PF Y H GS+AT+GR A+ + + K
Sbjct: 631 GGAYVAKVISKRIYNNNSRYK---------PFKYIHYGSLATVGRKAAVAEFDRFK---- 677
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
++G L+W W ++ +V RNR V +NW
Sbjct: 678 --ISGELAWWFWGGVHVFFLVGSRNRLSVILNW 708
>gi|86141966|ref|ZP_01060490.1| putative NADH dehydrogenase [Leeuwenhoekiella blandensis MED217]
gi|85831529|gb|EAQ49985.1| putative NADH dehydrogenase [Leeuwenhoekiella blandensis MED217]
Length = 451
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 137/278 (49%), Gaps = 26/278 (9%)
Query: 4 AGISEEEKSR--LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEA- 59
A I+ ++K R L + V+VGGGP GVE +G L++F + + Y I ++ LIEA
Sbjct: 168 AAITCDDKERDALTNFVIVGGGPAGVEMAGALAEFCKYILPKDYPEYPSSIMNIYLIEAI 227
Query: 60 NEILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVG 118
+E+L + D+ L V+ L+ V + D ++ G + L+W+ GV
Sbjct: 228 DELLGTMSDKASSKTLKYLEDLNVKVLLNEAVSNYDGNEVTTKSGKTILAKNLIWTAGV- 286
Query: 119 PSTLVKSLDLPK-SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
+D G RI D L+V +++FA+GD + + P +AQ A +
Sbjct: 287 KGQFPNGIDEKHIVRGNRIKTDANLKVEGYENIFAIGDIAALISKETPKGHPQVAQTAIQ 346
Query: 178 QGKYL-FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
QGKYL S+LN I S K PF Y+ GS+AT+G+ KA+ DL + K
Sbjct: 347 QGKYLGDSILNIINN------KSIK------PFKYKDKGSLATVGKRKAVADLGKFK--- 391
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
AG+ +WL+W +L + +RNR V NWA ++
Sbjct: 392 ---FAGYFAWLLWSVVHLMSISGFRNRLMVGFNWAVSY 426
>gi|326335260|ref|ZP_08201455.1| NADH dehydrogenase [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325692531|gb|EGD34475.1| NADH dehydrogenase [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 444
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 134/269 (49%), Gaps = 22/269 (8%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEANE-ILSSF 66
EE++ L++ V+VGGGPTGVE +G ++ + Y + ++V LI+A+ +L
Sbjct: 161 EERNSLMNFVIVGGGPTGVELAGAFAELKKHILPTDYPDLDIRKMNVNLIQADSRLLIGM 220
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
++ A L K GV + VKD D + ++ N Y L+W+ GV L++
Sbjct: 221 GEKSSEKAKEYLEKMGVSIWFNTFVKDYDGENVVTNTHNFQAY-TLIWTAGV-KGNLIEG 278
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
L GGR ++E+ +V ++FA+GD + P +AQ A +QGK L
Sbjct: 279 LSQESIIGGRYAVNEFNQVKGYDNIFAIGDIACMANEKQPKGHPMVAQPAIQQGKLLAKN 338
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
L RI N A PF Y GSMAT+GR KA+V+LR G+ +G+ +
Sbjct: 339 LKRI------FCNKAM-----IPFNYFDKGSMATVGRNKAVVELR------GMRFSGWFA 381
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
W++W + +L +V +RN+ NW +
Sbjct: 382 WILWITVHLAFLVGFRNKMVTLSNWIVQY 410
>gi|398354228|ref|YP_006399692.1| NADH dehydrogenase-like protein [Sinorhizobium fredii USDA 257]
gi|390129554|gb|AFL52935.1| NADH dehydrogenase-like protein [Sinorhizobium fredii USDA 257]
Length = 439
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 142/284 (50%), Gaps = 28/284 (9%)
Query: 8 EEEKSR---LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EI 62
EE+ +R LL ++G GPTGVE +G +++ R + + + V L+EA I
Sbjct: 165 EEDPARRDALLTFTIIGAGPTGVELAGIIAEMAHRTLPDEFRRIDTRQARVVLVEAGPRI 224
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPST 121
L +F + L YA T L K GV + G V D + + + D + VP LVW+ GV S
Sbjct: 225 LPAFAEELSAYAMTALGKLGVEVRTGTPVTDCTAAGVKIGD-SFVPSRTLVWAAGVQASP 283
Query: 122 LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 181
K L + GR +D+ L P +VF +GD + + G V P +A A++QG Y
Sbjct: 284 AAKWLGIEADRAGRAMVDQDLTAPGNPNVFVIGDTASVKQENGAPV-PGIAPAAKQQGAY 342
Query: 182 LFSLLN-RI-GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+ ++ R+ GK G F YRH GS+ATIG+ A++D + K
Sbjct: 343 VARVIRARLEGKPAPGH------------FRYRHQGSLATIGKRAAIIDFGRIK------ 384
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L G ++W W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 385 LKGGIAWWFWGIAHIYFLIGTRSRFAVAWSWLWIYLSGQHSARL 428
>gi|385274835|dbj|BAM13872.1| type II NAD(P)H dehydrogenase [Symplocarpus renifolius]
Length = 580
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 107/185 (57%), Gaps = 12/185 (6%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE- 61
L +++EE+ LH ++VGGGPTGVEF+ EL DF+ D+ + Y V+D + +++IEA E
Sbjct: 210 LPNLTDEERKTNLHFIIVGGGPTGVEFAAELHDFVSEDIAKLYPRVRDLVKISVIEAGEH 269
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDG---TEVPYGLLVWSTG 116
IL+ FD R+ +A + + G+ + G +VK D + ++ T VPYG+ VWSTG
Sbjct: 270 ILTMFDKRITAFAEEKFKRDGIDVKTGYRVVKVSDKEIIMTGKATGETAVPYGMAVWSTG 329
Query: 117 VGPSTLVKSLDLPKSPGG----RIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+G ++ LD K G + DEWLRV V+A+GDC+ + + A+
Sbjct: 330 IGTRPVI--LDFMKQIGQVDRRVLATDEWLRVRGCDGVYALGDCATISQRKVMDDISAIF 387
Query: 173 QVAER 177
+VA++
Sbjct: 388 KVADK 392
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 168 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRY 223
LPA AQVA +QG YL N + + E G PF Y+HLG A +G
Sbjct: 466 LPATAQVAAQQGYYLARCFNVMKNVEENPEGPLRMRESGRHRFRPFRYKHLGQFAPLGGE 525
Query: 224 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ L + S G+ S +W S Y ++ VSWR R V +W F+FGRD S I
Sbjct: 526 QTAAQLPGDWIS-----IGYGSQWLWYSVYASKQVSWRTRLSVVSDWTRRFIFGRDSSCI 580
>gi|148360676|ref|YP_001251883.1| NADH dehydrogenase transmembrane protein [Legionella pneumophila
str. Corby]
gi|296106259|ref|YP_003617959.1| NADH dehydrogenase, FAD-containing subunit [Legionella pneumophila
2300/99 Alcoy]
gi|148282449|gb|ABQ56537.1| NADH dehydrogenase transmembrane protein [Legionella pneumophila
str. Corby]
gi|295648160|gb|ADG24007.1| NADH dehydrogenase, FAD-containing subunit [Legionella pneumophila
2300/99 Alcoy]
Length = 738
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 32/273 (11%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN------ 60
S+EE+ + L+ V+VG GPTGVE +G +++ R+ VK++ H AN
Sbjct: 459 SDEERKQFLNFVIVGAGPTGVELAGAIAEL------ARFGIVKEFRHFDPASANIILVQA 512
Query: 61 --EILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV 117
IL +F +++ A L GV+ LV +V+ +DS +I+N + + W+ GV
Sbjct: 513 APRILPTFSEQISQKAQRYLESMGVKVLVNSMVEQIDSDGVIINK-ERIYSKSVFWAAGV 571
Query: 118 GPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
S K L L P GR+ +++ L V ++FA+GD + GK V P +A A++
Sbjct: 572 AASPASKWLQLEADPAGRVKVNDDLTVAGYSNIFAIGDTAASNAWNGKPV-PGIAPAAKQ 630
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
G Y+ ++++ R PF Y H GS+AT+GR A+ + + K
Sbjct: 631 GGAYVAKVISKRIYNNNSRYK---------PFKYIHYGSLATVGRKAAVAEFDRFK---- 677
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
++G L+W W ++ +V RNR V +NW
Sbjct: 678 --ISGELAWWFWGGVHVFFLVGSRNRLSVILNW 708
>gi|409196735|ref|ZP_11225398.1| NADH dehydrogenase [Marinilabilia salmonicolor JCM 21150]
Length = 428
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 143/279 (51%), Gaps = 36/279 (12%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVT--LIE-ANEILS 64
+ ++ R+L+ +VG GPTGVE +G S+ I +++ + H D T L+E +N +L+
Sbjct: 155 KADRERMLNLTIVGAGPTGVELAGAFSE-IKKEILPKDYHDIDLSKFTIRLVEGSNHVLN 213
Query: 65 SFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+ A L K GV L++ VKD D + L L+ G + ++W+ GV T
Sbjct: 214 NMSKASGEAAEKYLKKMGVVLLKNTFVKDYDGENLTLSSGETIKSATVIWAAGV---TGR 270
Query: 124 KSLDLPK---SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTG-KTVLPALAQVAERQG 179
K+ +P + G RI ++ +V ++FAVGD + Y+E+ P +A VA Q
Sbjct: 271 KTEGVPADAITRGNRIIVNRQNKVQGFDNIFAVGDIA-YMETPDYPNGHPQVANVAINQA 329
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESK 236
+ L A + K ++ G P + Y+ LGSMATIGR KA+VDL
Sbjct: 330 RLL--------------AKNLKQLQQGKPVADYKYKDLGSMATIGRNKAVVDL------P 369
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+ G+++WLVW +L ++S RNR + +NWA +V
Sbjct: 370 FIRFKGYIAWLVWMFLHLMLILSVRNRLIIFINWAWLYV 408
>gi|357144667|ref|XP_003573372.1| PREDICTED: external NADH-ubiquinone oxidoreductase 1,
mitochondrial-like [Brachypodium distachyon]
Length = 580
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 97/165 (58%), Gaps = 12/165 (7%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L ++EEEK + LH V+VGGGPTGVEF+ EL DF+ D+ + Y ++ + ++LIE A+
Sbjct: 210 LPYLNEEEKKKNLHFVIVGGGPTGVEFAAELHDFVTEDLSKLYPSIQHLVKISLIEAADH 269
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRG-----IVKDVDSQKLILNDGTEVPYGLLVWSTG 116
IL+ FD R+ ++A + ++G+ + G + KD + + VPYG+ VWSTG
Sbjct: 270 ILTMFDKRITNFAEDKFGRNGIDVKTGYKVVKVSKDAITMQNPATGDIAVPYGMAVWSTG 329
Query: 117 VGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCS 157
+G + +D K G + DEWLRV D++AVGDC+
Sbjct: 330 IGTRPFI--VDFMKQIGQANRRVLATDEWLRVRECDDIYAVGDCA 372
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 168 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRY 223
LPA AQVA +QG+YL N++ A + G PF YRHLG A +G
Sbjct: 466 LPATAQVAAQQGQYLARCFNKMPDAEENPEGPIRIRGEGRHRFRPFRYRHLGQFAPLGGE 525
Query: 224 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ L +S+ WL W S Y T+ +SWR R V +W F+FGRD S I
Sbjct: 526 QTAAQL----PGDWISIGHSSQWL-WYSVYATKQISWRTRALVISDWGRRFIFGRDSSCI 580
>gi|295135234|ref|YP_003585910.1| NADH dehydrogenase [Zunongwangia profunda SM-A87]
gi|294983249|gb|ADF53714.1| putative NADH dehydrogenase [Zunongwangia profunda SM-A87]
Length = 451
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 137/278 (49%), Gaps = 26/278 (9%)
Query: 4 AGISEEEKSR--LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEA- 59
A I+ ++K R L + V+VGGGP GVE +G L++F + + Y I ++ LIEA
Sbjct: 168 AAITCDDKERDALTNFVIVGGGPAGVEMAGALAEFCKYILPKDYPEYPSSIMNIYLIEAI 227
Query: 60 NEILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVG 118
+E+L + D+ L V+ L+ V + D ++ G + L+W+ GV
Sbjct: 228 DELLGTMSDKASSKTLKYLEDLNVKVLLNEAVSNYDGNEVTTKSGKTILAKNLIWTAGV- 286
Query: 119 PSTLVKSLDLPK-SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
+D G RI D L+V +++FA+GD + + P +AQ A +
Sbjct: 287 KGQFPNGIDEKHIVRGNRIKTDANLKVEGYENIFAIGDIAALISKETPKGHPQVAQTAIQ 346
Query: 178 QGKYL-FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
QGKYL S+LN I S K PF Y+ GS+AT+G+ KA+ DL + K
Sbjct: 347 QGKYLGDSILNIINN------KSIK------PFKYKDKGSLATVGKRKAVADLGKFK--- 391
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
AG+ +WL+W +L + +RNR V NWA ++
Sbjct: 392 ---FAGYFAWLLWSVVHLMSISGFRNRLMVGFNWAVSY 426
>gi|307609469|emb|CBW98963.1| hypothetical protein LPW_07481 [Legionella pneumophila 130b]
Length = 738
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 134/273 (49%), Gaps = 32/273 (11%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN------ 60
SEEE+ + L+ V+VG GPTGVE +G +++ R+ VK++ H AN
Sbjct: 459 SEEERKQFLNFVIVGAGPTGVELAGAIAEL------ARFGIVKEFRHFDPASANIILVQA 512
Query: 61 --EILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV 117
IL +F +++ A L GV+ LV +V+ +DS +I+N + + W+ GV
Sbjct: 513 APRILPTFSEQISQKAQHYLESMGVKVLVNSMVEQIDSDGVIINK-ERIYSKSVFWAAGV 571
Query: 118 GPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
S K L L P GR+ +++ L V ++F +GD + GK V P +A A++
Sbjct: 572 AASPASKWLQLEADPAGRVKVNDDLTVAGYSNIFVIGDTAASNAWNGKPV-PGIAPAAKQ 630
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
G Y+ ++++ R PF Y H GS+AT+GR A+ + + K
Sbjct: 631 GGAYVAKVISKRIYNNNSRYK---------PFKYIHYGSLATVGRKAAVAEFDRFK---- 677
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
++G L+W W ++ +V RNR V +NW
Sbjct: 678 --ISGELAWWFWGGVHVFFLVGSRNRLSVILNW 708
>gi|238481825|ref|XP_002372151.1| disulfide oxidoreductase, putative [Aspergillus flavus NRRL3357]
gi|220700201|gb|EED56539.1| disulfide oxidoreductase, putative [Aspergillus flavus NRRL3357]
Length = 417
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 139/289 (48%), Gaps = 33/289 (11%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L G SE + +LLH V+VGGGPTG+E + EL+D D+ + H+K V++I+ A +
Sbjct: 152 LPGTSEARQRQLLHIVIVGGGPTGIEVAAELTDLFEGDLGILFPHLKGLTSVSVIDVAPQ 211
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120
IL+ FD RL YA + L + V++ + + +V + + YG+L+W+TG
Sbjct: 212 ILAPFDQRLSEYACSALKTNKVKVKLNCHIVNVTKDTIETRESGITGYGMLIWATGNRSI 271
Query: 121 TLVKSLDLPKSPGG--RIGIDEWLRVPS-----VQDVFAVGDCSGYLESTGKTVLPALAQ 173
LV L L K+ G RI D+ L V S + +VFA+GD + T LP A+
Sbjct: 272 PLVDQLQLRKTEHGLVRILTDDHLNVFSPDGNVIPNVFAMGDAADIEGGT----LPTTAE 327
Query: 174 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 233
VA ++ YL L N + KD PF Y+ + G + +V ++
Sbjct: 328 VAIQKADYLIRLFN----------SGLKDTR---PFKYQQRSLVTYTGAWDGVVQGQR-- 372
Query: 234 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
G+ +WL WRS SWR R + W ++ GR+I R
Sbjct: 373 -----EYTGYGAWLSWRSGNFFWTRSWRRRVLMCYAWFMDWLDGREIIR 416
>gi|190892486|ref|YP_001979028.1| NADH dehydrogenase [Rhizobium etli CIAT 652]
gi|190697765|gb|ACE91850.1| NADH dehydrogenase protein [Rhizobium etli CIAT 652]
Length = 421
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 139/275 (50%), Gaps = 19/275 (6%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VG GPTGVE +G +++ + + + ++ V L+EA +L +F +
Sbjct: 153 RDALLTFTIVGAGPTGVELAGIIAELAHITLPREFRNIDTRKTRVVLVEAGPRVLPTFAE 212
Query: 69 RLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 128
L YA L K GV ++ G S + T V +VW+ GV S + L +
Sbjct: 213 ELSAYAQRALEKLGVEVLLGKPVTECSADGVRIGETFVASRTIVWAAGVTASPAARWLGV 272
Query: 129 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 188
P GR+ +++ L P + DVF +GD + + GK V P +A A++QG Y+ ++
Sbjct: 273 PADRAGRVVVEKDLSAPDLPDVFVIGDTASVMREDGKPV-PGIAPAAKQQGGYVAKVIR- 330
Query: 189 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 248
+ G A + PF Y H GS+ATIG+ A++D + K L G+++W +
Sbjct: 331 -ARLSGKSAPA--------PFKYWHQGSLATIGQSAAIIDFGRIK------LKGWIAWWI 375
Query: 249 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W A++ ++ R+RF VA NW ++ G+ +R+
Sbjct: 376 WGLAHIYFLIGTRSRFTVAWNWLWIYLSGQHSARL 410
>gi|347731654|ref|ZP_08864746.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Desulfovibrio sp. A2]
gi|347519604|gb|EGY26757.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Desulfovibrio sp. A2]
Length = 464
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 146/279 (52%), Gaps = 27/279 (9%)
Query: 4 AGISEEEKSR--LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEA 59
A ++E+ R LL VVGGGPTGVEF+G L++ + + + + + K + L+EA
Sbjct: 157 ASLTEDPARRAALLTFTVVGGGPTGVEFAGALAELVRTPLARDFPELAGKTPARIVLLEA 216
Query: 60 NE-ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV 117
+ +L+ F ++LR YA +L+ GV + + V +V + L DG + + W+ GV
Sbjct: 217 ADGLLTGFPEQLRTYARDRLALMGVEVRTKAGVAEVGPTDVRLGDGMRIATCTVAWTAGV 276
Query: 118 GPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
+ ++ LP GGR+ + L+V ++ VGD S G+ P +A A +
Sbjct: 277 RGHDVAAAMGLPVGRGGRVPVLPTLQVDGHPEIHVVGDLS---LPEGQNP-PMIAPNATQ 332
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
QG++ S + R+ + GG+A F YR G+MATIGR A+V L +
Sbjct: 333 QGRHAASNVLRLLQ--GGKAKV---------FRYRDKGAMATIGRQAAVVRLGR------ 375
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 276
+ +G +W++W +L ++ +RNR +V VNWA ++F
Sbjct: 376 FAFSGLWAWVLWLFVHLAYLIGFRNRLFVLVNWAWDYLF 414
>gi|444335479|ref|YP_007391848.1| NADH dehydrogenase [Blattabacterium sp. (Blatta orientalis) str.
Tarazona]
gi|444299858|gb|AGD98095.1| NADH dehydrogenase [Blattabacterium sp. (Blatta orientalis) str.
Tarazona]
Length = 429
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 139/277 (50%), Gaps = 34/277 (12%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEAN- 60
+E+ RL+ V+VGGGPTGVE +G L++ ++Y DY +++ L++A
Sbjct: 156 KERERLMTFVIVGGGPTGVELAGALAEM------KKYVLPNDYPDLDIQRMNIHLLQATP 209
Query: 61 EILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L + A L + GV + + +VKD D + + ++ + ++W+ GV
Sbjct: 210 RLLDGMSEPSAKQAFKNLKELGVNIWLDCLVKDYDGKIVFIDKNKSIESANVIWAAGVK- 268
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLE-STGKTVLPALAQVAERQ 178
++K G RI +D++L+ +++FA+GD + ++ S+ P +AQ A +Q
Sbjct: 269 GAIIKGFLKEDMEGQRILVDDYLKTLRYKNIFAIGDVAYMIKNSSYPNGHPMMAQPAIQQ 328
Query: 179 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 238
G YL NR + + PF Y++LG+MATIGR KA+ D K
Sbjct: 329 GNYLADNFNRFLEKKQIK-----------PFRYKNLGTMATIGRNKAVCDFPYFK----- 372
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
L GF +W+VW +L +V +RNR +NW ++
Sbjct: 373 -LKGFSAWIVWMFVHLVSLVGFRNRVIALMNWVIQYL 408
>gi|338814456|ref|ZP_08626471.1| putative oxidoreductase [Acetonema longum DSM 6540]
gi|337273555|gb|EGO62177.1| putative oxidoreductase [Acetonema longum DSM 6540]
Length = 424
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 151/290 (52%), Gaps = 27/290 (9%)
Query: 1 MF-LAGISEEEKSR--LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLI 57
MF LAG ++ + R LL VV GGGPTGVE +G +S+ + + Y H+ D+ V +I
Sbjct: 139 MFELAGREQDPEVRRALLTFVVAGGGPTGVESAGAISELVGLVLPPDYPHL-DFSQVRII 197
Query: 58 ---EANEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVW 113
A +L+ DRL Y L V + + V + + +K+IL G E+ L+W
Sbjct: 198 LLEAAGRLLAGIPDRLGDYTFRALQDKQVEVRLNTAVSEFNGEKIILKSGGEIATRTLIW 257
Query: 114 STGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
+ GV + L ++D PK+ R+ + L +P+ +VFA+GD + Y E G+ LP +A
Sbjct: 258 AAGVRAAALANAVDSPKASLNRLVVTPALELPNHPEVFAIGDLA-YFEQQGRP-LPMVAP 315
Query: 174 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 233
VA +Q + + R AG R PFVY+ G +ATIGR KA+ + +
Sbjct: 316 VAVQQASHAAQNIMR-HLAGQDRL----------PFVYKTPGILATIGRNKAVAVMGR-- 362
Query: 234 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+GF +W++W + ++ R++ + NR V+ +WA ++F + R+
Sbjct: 363 ----WQFSGFFAWVLWLNVHILRLIGFHNRLSVSFSWAWEYLFYDRVVRL 408
>gi|426402333|ref|YP_007021304.1| NADH dehydrogenase [Bdellovibrio bacteriovorus str. Tiberius]
gi|425859001|gb|AFY00037.1| NADH dehydrogenase [Bdellovibrio bacteriovorus str. Tiberius]
Length = 423
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 138/274 (50%), Gaps = 23/274 (8%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSF 66
E++ + L V+VG GPTGVE +G + + + + + H+ V LIEA IL++F
Sbjct: 150 EKQKQQLTFVIVGAGPTGVELAGTIGEISRHTLTKDFRHIDPSRTRVILIEAGPRILAAF 209
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
L A L GV++ V DV S ++L D + ++W+ GV PS++ K+
Sbjct: 210 HPDLSRKAAADLEDLGVQIWTNTRVTDVKSDSVVLGDEV-IKAATILWAAGVQPSSINKT 268
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
L +P GR+ I++ L + +VF +GD + YL G+ LP LA VA +QG +
Sbjct: 269 LGVPLDRAGRVIIEKDLSLKEHPEVFILGDQACYLTDNGQA-LPGLASVAMQQGTH---A 324
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
N+I + G+ F Y G MATIGR KA+ + L +GF +
Sbjct: 325 ANQILREIDGKPRLD--------FKYLDKGQMATIGRRKAIAQI------SNLKFSGFFA 370
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWA-TTFVFGR 278
W++W ++ ++ ++NR +V WA + F F R
Sbjct: 371 WILWLFIHVYYLIGFKNRVFVIWQWAYSYFTFKR 404
>gi|410074555|ref|XP_003954860.1| hypothetical protein KAFR_0A02890 [Kazachstania africana CBS 2517]
gi|372461442|emb|CCF55725.1| hypothetical protein KAFR_0A02890 [Kazachstania africana CBS 2517]
Length = 528
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 158/297 (53%), Gaps = 34/297 (11%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E+ RLL VVVGGGPTGVE +GEL D++ +D+++ + + + L+EA +L+ F
Sbjct: 236 DPERKRLLSIVVVGGGPTGVETAGELQDYVSQDLQKFLPSIAKEVQIHLVEALPTVLNMF 295
Query: 67 DDRLRHYATTQLSKSGV--RLVRGIVKDVDSQKLI-----LNDGT----EVPYGLLVWST 115
+ +L YA L K+ + RL +VK V+ + L+ DG+ +PYG L+W+T
Sbjct: 296 EKKLSSYAKKVLEKTTIKLRLSTAVVK-VEEKHLVSKTKNPEDGSTTEETIPYGTLIWAT 354
Query: 116 G--VGP--STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 171
G V P S L K + S + +++ +V ++FA+GD + ++ LP
Sbjct: 355 GNKVRPLISDLFKKIPEQNSSTRALVTNQFCQVKGSNNIFAIGD-NAFMG------LPPT 407
Query: 172 AQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD---------PFVYRHLGSMATIGR 222
AQVA +Q +YL L +++ + G + E D PF YRHLG++A +G
Sbjct: 408 AQVANQQAEYLSKLFDKMSQVNGFHDQLSARKEKYDLLFEENKFKPFSYRHLGALAYLGS 467
Query: 223 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
KA+ ++ K S + G +++ +WR YL+ ++S R RF V ++W F RD
Sbjct: 468 EKAIANITYGKRSL-YTGGGLMTFYIWRIVYLSMLLSARTRFKVCLDWLKLAFFKRD 523
>gi|54293654|ref|YP_126069.1| hypothetical protein lpl0707 [Legionella pneumophila str. Lens]
gi|53753486|emb|CAH14941.1| hypothetical protein lpl0707 [Legionella pneumophila str. Lens]
Length = 738
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 133/273 (48%), Gaps = 32/273 (11%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN------ 60
SEEE+ + L+ V+VG GPTGVE +G L + R+ VK++ H AN
Sbjct: 459 SEEERKQFLNFVIVGAGPTGVELAGALVEL------ARFGIVKEFRHFDPASANIILVQA 512
Query: 61 --EILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV 117
IL +F +++ A L GV+ LV +V+ +DS +I+N + + W+ GV
Sbjct: 513 APRILPTFSEQISQKAQHYLESMGVKVLVNSMVEQIDSDGVIINK-ERIYSKSVFWAAGV 571
Query: 118 GPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
S K L L P GR+ +++ L V ++F +GD + GK V P +A A++
Sbjct: 572 AASPASKWLQLEADPAGRVKVNDDLTVAGYSNIFVIGDTAASNAWNGKPV-PGIAPAAKQ 630
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
G Y+ ++++ R PF Y H GS+AT+GR A+ + + K
Sbjct: 631 GGAYVAKVISKRIYNNNSRYK---------PFKYIHYGSLATVGRKAAVAEFDRFK---- 677
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
++G L+W W ++ +V RNR V +NW
Sbjct: 678 --ISGELAWWFWGGVHVFFLVGSRNRLSVILNW 708
>gi|227822527|ref|YP_002826499.1| NADH dehydrogenase [Sinorhizobium fredii NGR234]
gi|227341528|gb|ACP25746.1| NADH dehydrogenase [Sinorhizobium fredii NGR234]
Length = 422
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 142/288 (49%), Gaps = 24/288 (8%)
Query: 2 FLAGISEEEKSR---LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLI 57
F SEE+ +R LL ++G GPTGVE +G +++ R + + + V L+
Sbjct: 142 FEQAESEEDPARRDALLTFTIIGAGPTGVELAGIIAEMAHRTLPDEFRRIDTRQARVILV 201
Query: 58 EAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWST 115
EA IL +F + L YA +L K GV + G V D + + + D + V LVW+
Sbjct: 202 EAGPRILPAFAEELSAYAMAELGKLGVEVRTGTPVTDCTAGGVRIGD-SFVASCTLVWAA 260
Query: 116 GVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
GV S K L + GR +D+ L P D F +GD + + G V P +A A
Sbjct: 261 GVQASPAAKWLGIDADRAGRAMVDQDLTAPDNPDAFVIGDTALIKQENGAPV-PGIAPAA 319
Query: 176 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 235
++QG Y+ ++ + G A PF YRH GS+ATIG+ A++D + K
Sbjct: 320 KQQGAYVARVIR--ARLDGQPAPG--------PFRYRHQGSLATIGKRAAIIDFGRIK-- 367
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L G L+W +W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 368 ----LKGGLAWWIWGIAHIYFLIGTRSRFAVAWSWLWIYLSGQHSARL 411
>gi|424895869|ref|ZP_18319443.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. trifolii WSM2297]
gi|393180096|gb|EJC80135.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. trifolii WSM2297]
Length = 421
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 143/276 (51%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VG GPTGVE +G +++ + + + ++ V L+EA +L +F +
Sbjct: 153 RDALLTFTIVGAGPTGVELAGIIAELAHFTLPKEFRNIDTRKTRVVLVEAGPRVLPTFAE 212
Query: 69 RLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L K GV + G V + + + + + T V +VW+ GV S L
Sbjct: 213 ELSAYAQKALEKLGVEIHLGRPVTECSADGVKIGE-TFVASRTIVWAAGVTASPAALWLG 271
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ +++ L P + DVF +GD + L GK V P +A A++QG Y+ +++
Sbjct: 272 VPADRAGRVVVEKDLSAPGLPDVFVIGDTASVLREDGKPV-PGIAPAAKQQGGYVAKVIH 330
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ G A + PF YRH GS+ATIG+ A++D + K L G+++W
Sbjct: 331 --ARLSGKPAPA--------PFRYRHQGSLATIGQSAAIIDFGRIK------LKGWIAWW 374
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 375 IWGLAHIYFLIGTRSRFSVAWSWLWIYLSGQHSARL 410
>gi|412994023|emb|CCO14534.1| predicted protein [Bathycoccus prasinos]
Length = 582
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 148/288 (51%), Gaps = 35/288 (12%)
Query: 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY-SHVKDYIHVTLIE-ANEILSSFDDRLR 71
LL VV+G GPTGVE + EL D + DV + + + ++ + +++ + +LS++D ++
Sbjct: 311 LLRFVVIGAGPTGVELAAELYDLVYNDVAKTFPKRLLKHVSINIVDLQDRLLSTYDRDIQ 370
Query: 72 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGT-----EVPYGLLVWSTGVGPSTLVKS 125
+YAT K+ + + VK+V L + D E+P+G+ VW +G+ + + +
Sbjct: 371 NYATDFFQKANINCILNTQVKEVKQCVLTVADKNTGEEKELPFGMAVWCSGIKMNPVCEK 430
Query: 126 L--DLPK--SPGGR-IGIDEWLRVP-SVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+ LP+ P R + D+ +RV S ++ +GDC LE PA AQVA+++G
Sbjct: 431 VMDSLPEGSQPSRRALLADKAMRVKGSDGSIYGIGDCVT-LEPKA---YPATAQVAKQEG 486
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESK 236
YL N+ + G L DP FVY H GS+A IG+ A+ D+
Sbjct: 487 YYLAERFNKAAETGNYAV-------LDDPNAEFVYTHRGSLAYIGKDAAVADI------P 533
Query: 237 GLS-LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G++ L G ++ L W+S VS N F V + T +FGRDISR+
Sbjct: 534 GVTILKGIMAGLFWKSFETVSQVSVGNSFKVGFDMLRTRIFGRDISRL 581
>gi|226363834|ref|YP_002781616.1| NADH dehydrogenase [Rhodococcus opacus B4]
gi|226242323|dbj|BAH52671.1| putative NADH dehydrogenase [Rhodococcus opacus B4]
Length = 434
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 140/282 (49%), Gaps = 38/282 (13%)
Query: 7 SEEEKSR-LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIE-ANEIL 63
S+ E+ R LLH +V+G GPTGVE +G++ + R + + + + VTL+E A E L
Sbjct: 151 SDAERRRDLLHFIVIGAGPTGVELAGQIKELAGRYFEKSLRDITAEEVTVTLVEGAGETL 210
Query: 64 SSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT-----EVPYGLLVWSTGV 117
F +L Y L K+GV +V G +V D+D L+ + + ++WS G+
Sbjct: 211 PVFGGKLSKYTQDSLEKAGVEVVLGTMVTDIDEHGATLSSPSTGFEKRLTADTIIWSAGI 270
Query: 118 GP----STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
+ L GGR+ +DE L V DVFA+GD + LPA +
Sbjct: 271 QANDFAAVLADRTGCETGRGGRLLVDEDLTVGRYDDVFAIGDMASL------NNLPAQSP 324
Query: 174 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 233
A + G+++ +++ G RA LG PF YR GSMA I R++A+ + +
Sbjct: 325 FAMQGGRHVAAIIT------GKRA-------LGTPFKYRDKGSMAIINRFRAITRVGK-- 369
Query: 234 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+ L G L+W +W + +L +V +RNR+ ++W +F+
Sbjct: 370 ----IELTGVLAWFLWLAVHLVYLVGFRNRYVAVMSWFGSFL 407
>gi|163787956|ref|ZP_02182402.1| putative NADH dehydrogenase [Flavobacteriales bacterium ALC-1]
gi|159876276|gb|EDP70334.1| putative NADH dehydrogenase [Flavobacteriales bacterium ALC-1]
Length = 423
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 21/273 (7%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIE-ANEILS 64
S++E+ L+ V+VG GPTGVE +G +++ + + Y + +H+ L+E A+ +L
Sbjct: 153 SKKEREAFLNFVIVGAGPTGVELAGAIAELKNNILPRDYRDLNPSDMHIHLLEGADRVLP 212
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV-GPSTL 122
+ L GV++ VKD D + N + L+W+ GV G
Sbjct: 213 PMSLHASKKSAKFLKALGVKVHCNTFVKDYDGLTVTTNSDLVMQSETLIWAAGVTGAPVG 272
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
+ D+ + R ++ + ++ D+FA+GD + + +T P +AQ A +QGK L
Sbjct: 273 GLTADILQGNANRYHVNAYNQIEGYDDIFAIGDIALMISNTYPKGHPQVAQPAIQQGKLL 332
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
L R+ D + PFVYR GSMATIGR KA+VDL++ K G
Sbjct: 333 GKNLLRL-----------IDNKPLKPFVYRDKGSMATIGRNKAVVDLKRYK------FGG 375
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
F +W +W +L +V +RNR V NW ++
Sbjct: 376 FFAWFIWMFVHLMSLVGFRNRIIVLFNWTYNYI 408
>gi|381399716|ref|ZP_09924735.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Microbacterium laevaniformans OR221]
gi|380772894|gb|EIC06579.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Microbacterium laevaniformans OR221]
Length = 441
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 135/282 (47%), Gaps = 34/282 (12%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEANEILSSFDDR 69
+++ L VV+GGGPTG+E +G L++ + + Y V D +TL++ +EIL F +
Sbjct: 145 RTKGLSVVVIGGGPTGIEMAGALAELRDQGLEPAYPELVGDAFRITLVQRSEILKPFLPK 204
Query: 70 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 128
LR YA QL + V L G V +V ++L+DG+ +P L VW+TGV P V+ L
Sbjct: 205 LRDYAAAQLRRRDVELRLGAGVDEVRPDAVVLSDGSVLPSDLTVWATGVAPHEEVRDWSL 264
Query: 129 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 188
P G RI + E L+V + VFA GD + P LAQ A + G+++ + R
Sbjct: 265 PLDKGDRIRVGEDLQVEGLPGVFAAGDV-----AVSPQDYPQLAQPAIQGGEHVARQIVR 319
Query: 189 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL---------- 238
+ AG + +PF Y G +A IGR A+ +L GL
Sbjct: 320 L-IAG----------QPTEPFSYYDKGQLAIIGRRAAIGELPGIANLPGLHRLRFLSKIP 368
Query: 239 ------SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
+L G+ W+ W ++T ++ RN+ V + +
Sbjct: 369 LLRKTVALTGWFGWMTWLFVHITSLLGPRNKLMVLIGLVARY 410
>gi|385274837|dbj|BAM13873.1| type II NAD(P)H dehydrogenase [Symplocarpus renifolius]
Length = 580
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 106/185 (57%), Gaps = 12/185 (6%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE- 61
L +++EE+ LH ++VGGGPTGVEF+ EL DF+ D+ + Y V+D + +++IEA E
Sbjct: 210 LPNLTDEERKTNLHFIIVGGGPTGVEFAAELHDFVSEDIAKLYPRVRDLVKISVIEAGEH 269
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVDSQKLILNDGT---EVPYGLLVWSTG 116
IL+ FD R+ +A + + G+ + G +VK D ++ T +PYG+ VWSTG
Sbjct: 270 ILTMFDKRITAFAEEKFKREGIDVKTGYRVVKVSDKDIIMTGKATGEIAIPYGMAVWSTG 329
Query: 117 VGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+G ++ LD K G + DEWLRV V+A+GDC+ + + A+
Sbjct: 330 IGTRPVI--LDFMKQIGQADRRVLATDEWLRVRGCDGVYALGDCATISQRKVMDDISAIF 387
Query: 173 QVAER 177
+VA++
Sbjct: 388 KVADK 392
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 168 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRY 223
LPA AQVA +QG YL N + + E G PF Y+HLG A +G
Sbjct: 466 LPATAQVAAQQGYYLARCFNVMKNVEENPEGPLRMRESGRHRFRPFRYKHLGQFAPLGGE 525
Query: 224 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ L + S G+ S +W S Y ++ VSWR R V +W F+FGRD S I
Sbjct: 526 QTAAQLPGDWIS-----IGYGSQWLWYSVYASKQVSWRTRLSVVSDWTRRFIFGRDSSCI 580
>gi|319953480|ref|YP_004164747.1| NADH dehydrogenase (ubiquinone) [Cellulophaga algicola DSM 14237]
gi|319422140|gb|ADV49249.1| NADH dehydrogenase (ubiquinone) [Cellulophaga algicola DSM 14237]
Length = 425
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 135/274 (49%), Gaps = 29/274 (10%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSFD 67
E+ LL+ +VG GPTGVE +G L++ + Y H+ + + L E +L
Sbjct: 156 ERKALLNFCIVGAGPTGVELAGALAELKQNVFPKDYKHLDIQEMQIHLFEGGPRVLPPMS 215
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV-GPSTLVKS 125
+ AT L K GV++ + IV D D + + L DG + +WS GV G S +
Sbjct: 216 ETASKKATEFLDKLGVQIHLNTIVSDFDGKTVTLKDGKTLETKNFIWSAGVTGASIKGLT 275
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTG-KTVLPALAQVAERQGKYLFS 184
D + R ++ + +V +D+FA+GD + Y+E+ P +AQ A +QG+ L
Sbjct: 276 EDSLVARLNRYKVNTFNQVAGFEDIFAIGDIA-YMETVDFPKGHPQVAQPAIQQGENL-- 332
Query: 185 LLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
A + K++ P F+Y G+MAT+GR KA+VDL++ L
Sbjct: 333 ------------AKNLKNLLANKPLKAFIYSDKGTMATVGRNKAVVDLKK------LKFG 374
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
GFL+W +W +L +V +RNR V NWA ++
Sbjct: 375 GFLAWFIWMFVHLMALVGFRNRVIVFFNWAYNYI 408
>gi|159185014|ref|NP_354992.2| NADH dehydrogenase [Agrobacterium fabrum str. C58]
gi|159140288|gb|AAK87777.2| NADH dehydrogenase [Agrobacterium fabrum str. C58]
Length = 421
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 136/279 (48%), Gaps = 19/279 (6%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILS 64
SEEE+ LL V++G GPTGVE +G +++ R + + +V V L+EA +L
Sbjct: 149 SEEERQALLTFVIIGAGPTGVEMAGMIAELAHRALPAEFRNVDTRKTRVLLVEAGPRVLP 208
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
F + L YA L K GV ++ G + + + T P +VW+ GV S K
Sbjct: 209 VFTEDLSTYAKEALEKLGVEVLLGTPVTACTDEGVTVGETYYPCRTVVWAAGVQASPAAK 268
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
L+ GR+ + L + D+F +GD + + GK V P +A A++QG Y+
Sbjct: 269 WLNAAGDRAGRVIVGPQLHLEDDADIFVIGDTAAVNQENGKPV-PGIAPAAKQQGAYVAK 327
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
++ + + PF Y H G++ATIG+ A++D + K L G L
Sbjct: 328 VIK----------ARLEGKPIPAPFRYSHQGNLATIGKRAAVIDFGRFK------LKGVL 371
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W +W A++ ++ R+R VA +W ++ G+ +R+
Sbjct: 372 AWWIWGLAHIYFLIGTRSRLAVAWSWLWIYLSGQHSARL 410
>gi|338732457|ref|YP_004670930.1| pyridine nucleotide-disulfide oxidoreductase [Simkania negevensis
Z]
gi|336481840|emb|CCB88439.1| pyridine nucleotide-disulfide oxidoreductase [Simkania negevensis
Z]
Length = 428
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 145/275 (52%), Gaps = 24/275 (8%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEIL 63
ISE EK L+ V++G GPTGVE +G +++ + + + + + + + L+E A +L
Sbjct: 150 ISEAEK--FLNFVIIGAGPTGVEMAGAIAEIAHKTLFKNFRRINPEKSKIYLVEAAPRVL 207
Query: 64 SSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
F ++L A L GVR+V G +V DV + + + D +P ++W+ G +
Sbjct: 208 PPFPEKLSIKARKNLEDMGVRVVTGELVTDVTEEGVQVGDDF-IPARNIIWAAGNQAAPF 266
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
+K+LD+P GR+ ++ L VP ++F +GD + + K LPA+A A +QG+Y+
Sbjct: 267 LKTLDVPLDRQGRVIVESDLTVPGYPELFVIGDAACAMGKDNKP-LPAIAPTAIQQGRYV 325
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
++ + R PF Y GS+ATIG KA+ + + + ++G
Sbjct: 326 SKIIKKQIPKKKRR-----------PFRYFDKGSIATIGTNKAVGYVGK------ILMSG 368
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFG 277
FL+WL W ++ +VS+R+RF V +NW ++ G
Sbjct: 369 FLAWLTWGFIHVFYLVSYRSRFTVMLNWVFHYMTG 403
>gi|41581271|emb|CAE47920.1| pyridine nucleotide-disulphide oxidoreductase family protein,
putative [Aspergillus fumigatus]
Length = 743
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 151/295 (51%), Gaps = 52/295 (17%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
EEE RLLH VVVGGGPTGVEF+GEL DF D+++ +KD HVTL+EA +L F
Sbjct: 278 EEEVKRLLHMVVVGGGPTGVEFAGELQDFFNEDLKKWIPEIKDNFHVTLVEALPNVLPMF 337
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTGV 117
+L Y + + + + + +VK+V + ++ DGT+ +PYGLLVW+TG
Sbjct: 338 SKQLIDYTESTFKEEAITIRTKTMVKNVTDKYIEAEVTKPDGTKELETIPYGLLVWATGN 397
Query: 118 GPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
+V+ L +P R + ++E+L V ++V+AVGDC+ T AQ
Sbjct: 398 AVRNVVRDLMNQIPAQKNSRRGLAVNEYLVVNGTENVWAVGDCAV-------TNYAPTAQ 450
Query: 174 VAERQGKYLFSLLN-------------RIGKAGGGRANSAKDMELGD------------- 207
VA ++G +L L N R+ +A N + ++ D
Sbjct: 451 VASQEGAFLARLFNTMAKTEAIEKELKRLSEAQAVAKNEEERNKIFDEIRERQKQLRRTK 510
Query: 208 ---PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVS 259
PF Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ S
Sbjct: 511 QIGPFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTVTYLFWRSAYLSMCFS 563
>gi|357123480|ref|XP_003563438.1| PREDICTED: external NADH-ubiquinone oxidoreductase 1,
mitochondrial-like [Brachypodium distachyon]
Length = 589
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 102/164 (62%), Gaps = 9/164 (5%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE- 61
L ISEEEK ++LH V++GGGPTGVEF+ EL DF++ D+ + Y +++++ +T+I++ E
Sbjct: 216 LPNISEEEKRKILHFVIIGGGPTGVEFAAELHDFLVEDLVKIYPAIQEFVKITIIQSGEH 275
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILND---GTE--VPYGLLVWST 115
IL+ FD R+ +A T+ + G+ + G V +V + + G+E VPYG+ VWS
Sbjct: 276 ILNMFDQRIAEFAETKFLRDGIEVCTGFRVVNVSDDLITMKSKSAGSEISVPYGMAVWSA 335
Query: 116 GVG--PSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS 157
G+G P T+ + ++ + +EWLRV V+A+GDC+
Sbjct: 336 GIGTRPVTVDFMHQIGQAKRRSLETNEWLRVRECDSVYAIGDCA 379
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 68/132 (51%), Gaps = 12/132 (9%)
Query: 158 GYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKA-----GGGRAN-SAKDMELGDPFVY 211
G+++S K+V PA AQVA +QG YL N++ G R SA PF Y
Sbjct: 464 GHVDSQVKSV-PATAQVAAQQGYYLADCFNKMDYCKDHPEGPLRMTGSAAGHHNFRPFRY 522
Query: 212 RHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA 271
+HLG A +G +A +L + S G S WL W S Y ++ VSWR R V +W
Sbjct: 523 KHLGQFAPLGGEQAAAELPGDWVSMGHST----QWL-WYSVYASKQVSWRTRVLVVSDWT 577
Query: 272 TTFVFGRDISRI 283
F+FGRD SRI
Sbjct: 578 RRFIFGRDSSRI 589
>gi|320450839|ref|YP_004202935.1| NADH dehydrogenase [Thermus scotoductus SA-01]
gi|320151008|gb|ADW22386.1| NADH dehydrogenase [Thermus scotoductus SA-01]
Length = 395
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/280 (34%), Positives = 141/280 (50%), Gaps = 40/280 (14%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH-----VTLIEAN-EILS 64
+ R L +VVGGGPTGVE +G LS+F+ RY+ +D+ VTL+EA +L
Sbjct: 146 RGRPLDLLVVGGGPTGVELAGALSEFL------RYALPRDFPEVPAGAVTLLEAGPRLLP 199
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+F L YA L++ GVR+ G V +V + L+ G + L++W+ GV + L
Sbjct: 200 AFRPALGRYAEGALAQLGVRVRLGAQVAEVGEGWVRLSGGERLKGDLVLWAVGVRGNPLP 259
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
LP GR+ D LR+ +V+ VGD +G P LA VA +QG++
Sbjct: 260 ---GLPADARGRVPTDPCLRLVGYPEVYVVGDLNG-------LGFPQLAPVALQQGRWAA 309
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
L RA +D PF YR G +A IGR +A+ +L GL +AG
Sbjct: 310 RNLL--------RALREQDPL---PFRYRDRGQLAVIGRNRAVAEL------WGLGVAGL 352
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+WL+W +L +V +RNR V ++WA T++F RI
Sbjct: 353 PAWLLWAFVHLRELVGFRNRLLVFLDWAYTYLFREPGVRI 392
>gi|325001307|ref|ZP_08122419.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Pseudonocardia sp. P1]
Length = 479
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 139/284 (48%), Gaps = 34/284 (11%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILS 64
+EEE+ VVVG GPTGVE +G+LS+ + + Y + +D + L A +L
Sbjct: 162 TEEEQRAWTTFVVVGAGPTGVELAGQLSELARHVLPREYRAIDTRDARIILLDAAPAVLP 221
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN--DGTE-VPYGLLVWSTGVGPS 120
F +L++Y L K GV + + + D+D+ + + GT+ + VW+ GV S
Sbjct: 222 PFAKKLQNYTRKTLEKKGVEVRLNTMATDIDADSITVKGPQGTDRIVARTKVWAAGVQAS 281
Query: 121 TLVKSLDLPKSPG------GRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
L + L K+ G GR+ +D +P +DVFA+GD ++ LP +AQV
Sbjct: 282 PLAEL--LAKASGGEVDRAGRLSVDPDCSLPGRRDVFAIGDMVSTIDR-----LPGVAQV 334
Query: 175 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 234
A +QG Y+ L+ +A S D PF Y GSMATIG +A+ D+R
Sbjct: 335 AMQQGTYVGKLI---------KARSKGDDTTPAPFTYFDKGSMATIGAREAVADVR---- 381
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
G+ G+L +L+W ++ ++ W NR NW + + R
Sbjct: 382 --GVKFTGWLGYLMWCYVHVMFLIGWGNRLGTLYNWVRSLRYAR 423
>gi|429730477|ref|ZP_19265124.1| pyridine nucleotide-disulfide oxidoreductase [Corynebacterium durum
F0235]
gi|429147633|gb|EKX90657.1| pyridine nucleotide-disulfide oxidoreductase [Corynebacterium durum
F0235]
Length = 467
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 135/275 (49%), Gaps = 32/275 (11%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSS 65
+E++ RLL V+VG GPTGVE +G++++ R +R YS+ + V L++ A ++L
Sbjct: 162 KEQRERLLTFVIVGAGPTGVELAGQVAEMAHRTLRDEYSNFDTNSAKVVLLDGAPQVLPP 221
Query: 66 FDDRLRHYATTQLSKSGVR-----LVRGIVKDVDSQKLILNDGTE-VPYGLLVWSTGVGP 119
F RL A QL K GV +V I KD + K +D E +P +WS GV
Sbjct: 222 FGKRLGRNAQRQLEKLGVTVKLNAIVTDITKDSVTYKSTQDDTIETIPCFCKIWSAGVAA 281
Query: 120 STLVK----SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
S L K + GR+ ++ L V +VF +GD Y LP +AQVA
Sbjct: 282 SPLGKLIADQTGVEIDRAGRVMVNPDLSVGDHNNVFVIGDMMNY------NNLPGVAQVA 335
Query: 176 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 235
+ G+Y + N + + G +D +PF Y GSMAT+ RY A+V + +
Sbjct: 336 IQGGEY--AAENIVAEVDG------RDPNAREPFEYFDKGSMATVSRYSAVVKIGK---- 383
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+ GF+ W+ W ++ +V +RNR A +W
Sbjct: 384 --VEFTGFIGWVAWLLVHMMFLVGFRNRATAAASW 416
>gi|390954895|ref|YP_006418653.1| NADH dehydrogenase, FAD-containing subunit [Aequorivita
sublithincola DSM 14238]
gi|390420881|gb|AFL81638.1| NADH dehydrogenase, FAD-containing subunit [Aequorivita
sublithincola DSM 14238]
Length = 423
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 134/273 (49%), Gaps = 23/273 (8%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSS 65
E E+ RLL+ V+ G GPTGVE +G L++F + Y + +D ++V LIE N +L
Sbjct: 154 EVERKRLLNFVIAGAGPTGVELAGALAEFRKGILENDYPELDEDEMNVHLIEGQNRVLPP 213
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
+ + A L K GV+L + ++ D D + + DG + +W+ GV LVK
Sbjct: 214 MSEAVSKKAQKYLEKLGVQLHLETLISDFDGKTVTTKDGKKFETATFIWAAGV-TGALVK 272
Query: 125 SLDLPK--SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
+D R +DE+ ++ S +++A+GD + P +AQ A +QGK L
Sbjct: 273 GIDGEALVEKANRYKVDEFNKIVSFNNIYALGDIALMETKEYPKGHPQVAQPAIQQGKNL 332
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
++ K E +PF Y G+MAT+GR KA+VD+ + + G
Sbjct: 333 GKNFKKMLKG-----------EKLEPFKYFDKGTMATVGRNKAVVDIGK------MHFGG 375
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
++W +W +L +V +RNR NW +++
Sbjct: 376 AIAWFLWMFVHLWFLVGFRNRVVTFFNWTYSYI 408
>gi|156845483|ref|XP_001645632.1| hypothetical protein Kpol_541p17 [Vanderwaltozyma polyspora DSM
70294]
gi|156116298|gb|EDO17774.1| hypothetical protein Kpol_541p17 [Vanderwaltozyma polyspora DSM
70294]
Length = 532
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 162/295 (54%), Gaps = 31/295 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E+ RLL VVVGGGPTGVE +GEL D++ +D+++ V + + + L+EA +L+ F
Sbjct: 241 DPERKRLLSIVVVGGGPTGVETAGELQDYVSQDLKKFLPSVAEEVQIHLVEALPVVLNMF 300
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLI----LNDG----TEVPYGLLVWSTGV 117
+ +L YA + L K+ ++L ++ V V+ LI L+DG T++PYG L+W+TG
Sbjct: 301 EKKLSSYAQSVLEKTSIKLHLKTAVGLVEEDHLIAKTKLDDGSVKETKIPYGTLIWATGN 360
Query: 118 GPSTLVKSL--DLPK--SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
L+ +L +P+ S + ++++L+V ++FA+GD + LP AQ
Sbjct: 361 KARPLITNLFKKIPEQNSSTRALNVNQFLQVKGSNNIFAIGDNAF-------AGLPPTAQ 413
Query: 174 VAERQGKYLFSLLNRIGKAGGGR-----ANSAKDMELGD----PFVYRHLGSMATIGRYK 224
VA ++ +YL + +++ A D+ L + PF Y HLG++A +G +
Sbjct: 414 VAHQEAEYLAKVFDKMDNLPNFHDKLIAAKEKPDVLLEENGFKPFKYVHLGALAYLGAER 473
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
A+ ++ K S + G +++ VWR Y++ ++S R+RF V +W F RD
Sbjct: 474 AIANITYGKRS-FYTGGGLITFYVWRMLYVSMILSARSRFKVITDWLKLAFFKRD 527
>gi|419968950|ref|ZP_14484738.1| NADH dehydrogenase [Rhodococcus opacus M213]
gi|414565686|gb|EKT76591.1| NADH dehydrogenase [Rhodococcus opacus M213]
Length = 434
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 141/282 (50%), Gaps = 38/282 (13%)
Query: 7 SEEEKSR-LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIE-ANEIL 63
S+ E+ R LLH +V+G GPTGVE +G++ + R + + + + VTL+E A E L
Sbjct: 151 SDPERRRDLLHFIVIGAGPTGVELAGQIKELAGRYFEKSLRDITSEDVTVTLVEGAGETL 210
Query: 64 SSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT-----EVPYGLLVWSTGV 117
F +L Y L ++GV +V G +V D+D L+ + + ++WS G+
Sbjct: 211 PVFGGKLSKYTQDSLERAGVEVVLGTMVTDIDEHGATLSSPSTGFEKRLTADTIIWSAGI 270
Query: 118 GP----STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
+ L + GGR+ +DE L V DV+A+GD + LPA +
Sbjct: 271 QANDFAAVLAERTGCETGRGGRLLVDEDLTVGRYDDVYAIGDMASL------NNLPAQSP 324
Query: 174 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 233
A + G+++ +++ G RA LG PF YR GSMA I R++A+ + +
Sbjct: 325 FAMQGGRHVAAIIT------GKRA-------LGTPFTYRDKGSMAIINRFRAITRVGK-- 369
Query: 234 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+ L G L+W +W + +L +V +RNR+ ++W +F+
Sbjct: 370 ----VELTGVLAWFLWLAVHLVYLVGFRNRYVAVMSWCGSFL 407
>gi|198283640|ref|YP_002219961.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218666378|ref|YP_002426269.1| pyridine nucleotide-disulfide oxidoreductase [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198248161|gb|ACH83754.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518591|gb|ACK79177.1| pyridine nucleotide-disulfide oxidoreductase [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 418
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEANE-ILSSFD 67
++ R L V+ GGGPTGVEF L + + + + Y ++ + + VTL++ + +L F
Sbjct: 149 QQQRWLSFVIAGGGPTGVEFCAALLELLRVVLPRDYPELRLEDLQVTLVQGSAALLPGFS 208
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
L+ A +L K G +L V+ D Q + +P LVW+ GV + L ++
Sbjct: 209 APLQGQAARKLQKLGAQLRFHTHVQGFDGQMVQCQPDPAIPARTLVWTAGVTANPLAATM 268
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
+ PGGRI +D LR+P +VF +GD + S+ P +A A + +++ +L
Sbjct: 269 PGARGPGGRIIVDPHLRLPEYPEVFILGDLAC---SSNGEFWPQVAPFALQSARHVALVL 325
Query: 187 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
+ + L PF YR GSMA IGR+ A+ ++ E L G+ +W
Sbjct: 326 Q----------SQRQGRPLPPPFAYRDPGSMAVIGRFDAVCEI----ERWHLHWHGWSAW 371
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
L+W +L ++ RNR ++W T ++
Sbjct: 372 LLWLGLHLYHIIGTRNRLLTLLDWGTDYL 400
>gi|384099786|ref|ZP_10000860.1| NADH dehydrogenase [Rhodococcus imtechensis RKJ300]
gi|383842707|gb|EID81967.1| NADH dehydrogenase [Rhodococcus imtechensis RKJ300]
Length = 434
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 141/282 (50%), Gaps = 38/282 (13%)
Query: 7 SEEEKSR-LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIE-ANEIL 63
S+ E+ R LLH +V+G GPTGVE +G++ + R + + + + VTL+E A E L
Sbjct: 151 SDPERRRDLLHFIVIGAGPTGVELAGQIKELAGRYFEKSLRDITSEDVTVTLVEGAGETL 210
Query: 64 SSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT-----EVPYGLLVWSTGV 117
F +L Y L ++GV +V G +V D+D L+ + + ++WS G+
Sbjct: 211 PVFGGKLSKYTQDSLERAGVEVVLGTMVTDIDEHGATLSSPSTGFEKRLTADTIIWSAGI 270
Query: 118 GP----STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
+ L + GGR+ +DE L V DV+A+GD + LPA +
Sbjct: 271 QANDFAAVLAERTGCETGRGGRLLVDEDLTVGRYDDVYAIGDMASL------NNLPAQSP 324
Query: 174 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 233
A + G+++ +++ G RA LG PF YR GSMA I R++A+ + +
Sbjct: 325 FAMQGGRHVAAIIT------GKRA-------LGTPFTYRDKGSMAIINRFRAITRVGK-- 369
Query: 234 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+ L G L+W +W + +L +V +RNR+ ++W +F+
Sbjct: 370 ----VELTGVLAWFLWLAVHLVYLVGFRNRYVAVMSWCGSFL 407
>gi|242773479|ref|XP_002478248.1| pyridine nucleotide-disulphide oxidoreductase, putative
[Talaromyces stipitatus ATCC 10500]
gi|218721867|gb|EED21285.1| pyridine nucleotide-disulphide oxidoreductase, putative
[Talaromyces stipitatus ATCC 10500]
Length = 580
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 152/349 (43%), Gaps = 84/349 (24%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L +EE + LLH +VG GPTG E + L DF+ +++ + Y +KD ++L + A
Sbjct: 248 LPTTTEEMQRYLLHFAIVGAGPTGTELAATLRDFVSKNMAELYPALKDKTRISLYDVAPT 307
Query: 62 ILSSFDDRLRHYATTQLSKSGV---------RLVRGIVK-----DVDSQ---KLILNDGT 104
+LS FD L YA +SK G+ L GI ++D + L +
Sbjct: 308 VLSMFDKSLSQYAIGTMSKDGIDIRTSHHIQELRWGIPNTEGPHEMDPKGCLTLKTKEQG 367
Query: 105 EVPYGLLVWSTGVGPSTLVK-SLD-------------------------LPKSPG-GRIG 137
+V G+ VW+TG + +K SL+ + K+P G +
Sbjct: 368 DVGVGMCVWATGNAMNKFIKYSLNEIDEFPASSALLKDSSSLVDIKGWRVKKAPKVGALL 427
Query: 138 IDEWLR----------VPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+D + R V +QDVFA+GD + + TG PA AQ ++ K+L N
Sbjct: 428 VDGYFRVQLEHESTGQVAVLQDVFAIGDNA--MPETGAP--PATAQATSQEAKWLAERFN 483
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG---------- 237
D+ F + ++G++A IG AL+ + K +
Sbjct: 484 N------------GDLNKVPSFSFHNMGTLAYIGSSNALMQIPHEKVNTNGGKDGARRNP 531
Query: 238 ---LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L G ++WLVW+ AYL+ +SWRNRF + W VFG D+SR
Sbjct: 532 YLPEGLTGRMAWLVWKVAYLSMSISWRNRFRILFRWTLNRVFGSDVSRF 580
>gi|408785758|ref|ZP_11197500.1| NADH dehydrogenase [Rhizobium lupini HPC(L)]
gi|408488477|gb|EKJ96789.1| NADH dehydrogenase [Rhizobium lupini HPC(L)]
Length = 421
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 134/279 (48%), Gaps = 19/279 (6%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILS 64
SEEE+ LL V++G GPTGVE +G +++ + + + +V V L+EA +L
Sbjct: 149 SEEERQALLTFVIIGAGPTGVEMAGMIAELAHKALPAEFRNVDTRKTRVLLVEAGPRVLP 208
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
F + L YA L K GV ++ G S + + T P +VW+ GV S K
Sbjct: 209 VFTEDLSAYAKEALEKLGVEVLLGTPVTACSDEGVTVGETHYPCRTVVWAAGVQASPAAK 268
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
L+ GR + L + D+F +GD + + GK V P +A A++QG Y
Sbjct: 269 WLNAAADRAGRAIVGPQLNLEDDPDIFVIGDTAAVNQENGKPV-PGIAPAAKQQGAY--- 324
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
+ K R + PF Y H G++ATIG+ A++D + L L G L
Sbjct: 325 ----VAKVIKARLDGKP---FPSPFRYSHQGNLATIGKRAAVIDFGR------LKLKGVL 371
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W +W A++ ++ R+R VA +W ++ G+ +R+
Sbjct: 372 AWWIWGLAHIYFLIGTRSRLAVAWSWLWIYLSGQHSARL 410
>gi|404448591|ref|ZP_11013584.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Indibacter alkaliphilus LW1]
gi|403766212|gb|EJZ27087.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Indibacter alkaliphilus LW1]
Length = 448
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 139/270 (51%), Gaps = 20/270 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSF 66
EE+ +++ V+VGGG TGVE +G +++ + + Y + + + V LIEA +L+
Sbjct: 165 EERRPIMNVVIVGGGATGVELAGAIAELRNQVFPKDYPQLSFENMRVILIEAGPSLLAGL 224
Query: 67 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
+ + A + L K GV ++ G +V+D D + L D + L+W+ GV ++L+
Sbjct: 225 SENSQQKAQSYLKKLGVEVMLGTMVEDFDGYTVTLKDKEPIKTITLLWAAGVKANSLLGI 284
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
D+ + GR+ +D++ ++ + ++ +GD E P +AQVA +Q K L
Sbjct: 285 ADVQMAKNGRLLVDQFNKLLNDDSIYVLGDQCLQEEEEFPNGHPQVAQVAIQQAKNLAVN 344
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
L R K+ E PF YR LGSMAT+G+ A+VDL +S G +
Sbjct: 345 LKR----------DLKNQE-WKPFRYRDLGSMATVGKKMAVVDL------PFISFQGIFA 387
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
WLVW +L ++ +N+ + +NWA ++
Sbjct: 388 WLVWLFVHLMAILGVKNKLIIFINWAWKYL 417
>gi|42521954|ref|NP_967334.1| NADH dehydrogenase [Bdellovibrio bacteriovorus HD100]
gi|39574484|emb|CAE77988.1| NADH dehydrogenase [Bdellovibrio bacteriovorus HD100]
Length = 429
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 137/274 (50%), Gaps = 23/274 (8%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSF 66
E++ + L V+VG GPTGVE +G + + + + + H+ V LIEA IL++F
Sbjct: 156 EKQKQQLTFVIVGAGPTGVELAGTIGEISRHTLTKDFRHIDPSRTRVILIEAGPRILAAF 215
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
L A L GV++ V DV S ++L D + ++W+ GV PS++ K+
Sbjct: 216 HPDLSRKAAADLEDLGVQIWTNTRVTDVKSDSVVLGDEV-IKAATILWAAGVQPSSINKT 274
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
L +P GR+ I++ L + +VF +GD + YL G+ LP LA VA +QG +
Sbjct: 275 LGVPLDRAGRVIIEKDLSLKEHPEVFVLGDQACYLTDKGQA-LPGLASVAMQQGTH---A 330
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
N+I + G+ F Y G MATIGR KA+ + L +GF +
Sbjct: 331 ANQILREIEGKPRLE--------FKYLDKGQMATIGRRKAIAQI------SNLKFSGFFA 376
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWA-TTFVFGR 278
W++W ++ ++ ++N+ +V WA F F R
Sbjct: 377 WILWLFIHVYYLIGFKNKVFVIWQWAYAYFTFKR 410
>gi|261749513|ref|YP_003257199.1| type II NADH dehydrogenase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497606|gb|ACX84056.1| putative type II NADH dehydrogenase [Blattabacterium sp.
(Periplaneta americana) str. BPLAN]
Length = 429
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 138/276 (50%), Gaps = 34/276 (12%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEAN- 60
+E+ RL+ V+VGGGPTGVE +G L++ ++Y DY +++ L++A
Sbjct: 156 KERERLMTFVIVGGGPTGVELAGALAEM------KKYVLQNDYPDLDIQRMNIHLLQATP 209
Query: 61 EILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L + A L + GV + + +VKD D + + ++ + ++W+ GV
Sbjct: 210 RLLDGMSETSAKQAFKNLKELGVNIWLDCLVKDYDGKIVFIDKNKSIESANVIWAAGV-K 268
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES-TGKTVLPALAQVAERQ 178
++K G RI +D++L+ +++FA+GD + +++ + P +AQ A +Q
Sbjct: 269 GAIIKGFLKEDMEGKRILVDDYLKTLRYKNIFAIGDVAYMIKNHSYPNGHPMMAQPAIQQ 328
Query: 179 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 238
G YL NR + + PF Y++LG+MATIGR KA+ D K
Sbjct: 329 GNYLADNFNRFLEKKQIK-----------PFRYKNLGTMATIGRNKAVCDFPYFK----- 372
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
L GF +W+VW +L +V +RNR +NW +
Sbjct: 373 -LKGFSAWIVWMFVHLVSLVGFRNRVIALMNWVIQY 407
>gi|449488409|ref|XP_004158024.1| PREDICTED: NAD(P)H dehydrogenase B3, mitochondrial-like [Cucumis
sativus]
Length = 584
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 100/164 (60%), Gaps = 9/164 (5%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L + EE++ ++LH +VGGGPTGVEF+ EL DF+ D+ + Y +++++ +TL+EA +
Sbjct: 213 LPTLDEEDRKKILHFAIVGGGPTGVEFAAELHDFVNEDLVKLYPGLQEFVKITLLEAGDH 272
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRGIV------KDVDSQKLILNDGTEVPYGLLVWST 115
IL+ FD R+ +A + + G+ + G + K++ ++++ + + +PYG+ VWST
Sbjct: 273 ILNMFDKRITTFAEEKFRRDGIDVKTGSMVIKVTDKEISTKEMKNGEISSMPYGMTVWST 332
Query: 116 GVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 157
G+G ++K R + DEWLRV +V+A+GDC+
Sbjct: 333 GIGTRPIIKDFMTQIGQANRRALATDEWLRVEGCDNVYALGDCA 376
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 58/127 (45%), Gaps = 23/127 (18%)
Query: 168 LPALAQVAERQGKYLFSLLNRIGKA-----------GGGRANSAKDMELGDPFVYRHLGS 216
LPA AQVA +QG YL NR+ + G GR F Y+HLG
Sbjct: 470 LPATAQVAAQQGAYLAHCFNRMEECEKYPEGPLRFRGSGRHRFRA-------FRYKHLGQ 522
Query: 217 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 276
A +G + L + S G S WL W S Y ++ VSWR R V +W F+F
Sbjct: 523 FAPLGGEQTAAQLPGDWVSIGHSS----QWL-WYSVYASKQVSWRTRALVVTDWTRRFIF 577
Query: 277 GRDISRI 283
GRD SRI
Sbjct: 578 GRDSSRI 584
>gi|449457690|ref|XP_004146581.1| PREDICTED: NAD(P)H dehydrogenase B3, mitochondrial-like [Cucumis
sativus]
Length = 584
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 100/164 (60%), Gaps = 9/164 (5%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L + EE++ ++LH +VGGGPTGVEF+ EL DF+ D+ + Y +++++ +TL+EA +
Sbjct: 213 LPTLDEEDRKKILHFAIVGGGPTGVEFAAELHDFVNEDLVKLYPGLQEFVKITLLEAGDH 272
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRGIV------KDVDSQKLILNDGTEVPYGLLVWST 115
IL+ FD R+ +A + + G+ + G + K++ ++++ + + +PYG+ VWST
Sbjct: 273 ILNMFDKRITTFAEEKFRRDGIDVKTGSMVIKVTDKEISTKEMKNGEISSMPYGMTVWST 332
Query: 116 GVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 157
G+G ++K R + DEWLRV +V+A+GDC+
Sbjct: 333 GIGTRPIIKDFMTQIGQANRRALATDEWLRVEGCDNVYALGDCA 376
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 58/127 (45%), Gaps = 23/127 (18%)
Query: 168 LPALAQVAERQGKYLFSLLNRIGKA-----------GGGRANSAKDMELGDPFVYRHLGS 216
LPA AQVA +QG YL NR+ + G GR F Y+HLG
Sbjct: 470 LPATAQVAAQQGAYLAHCFNRMEECEKYPEGPLRFRGSGRHRFRA-------FRYKHLGQ 522
Query: 217 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 276
A +G + L + S G S WL W S Y ++ VSWR R V +W F+F
Sbjct: 523 FAPLGGEQTAAQLPGDWVSIGHSS----QWL-WYSVYASKQVSWRTRALVVTDWTRRFIF 577
Query: 277 GRDISRI 283
GRD SRI
Sbjct: 578 GRDSSRI 584
>gi|111021475|ref|YP_704447.1| NADH dehydrogenase [Rhodococcus jostii RHA1]
gi|397734595|ref|ZP_10501300.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Rhodococcus sp. JVH1]
gi|110821005|gb|ABG96289.1| probable NADH dehydrogenase [Rhodococcus jostii RHA1]
gi|396929522|gb|EJI96726.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Rhodococcus sp. JVH1]
Length = 434
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 141/282 (50%), Gaps = 38/282 (13%)
Query: 7 SEEEKSR-LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIE-ANEIL 63
S+ E+ R LLH +V+G GPTGVE +G++ + R + + + + VTL+E A E L
Sbjct: 151 SDPERRRDLLHFIVIGAGPTGVELAGQIKELAGRYFEKSLRDITSEDVTVTLVEGAGETL 210
Query: 64 SSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT-----EVPYGLLVWSTGV 117
F +L Y L ++GV +V G +V D+D L+ + + ++WS G+
Sbjct: 211 PVFGGKLSKYTQDSLERAGVEVVLGTMVTDIDEHGATLSSPSTGFEKRLTADTIIWSAGI 270
Query: 118 GP----STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
+ L + GGR+ +DE L V D++A+GD + LPA +
Sbjct: 271 QANDFAAVLAERTGCETGRGGRLLVDEDLTVGRYDDIYAIGDMASL------NNLPAQSP 324
Query: 174 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 233
A + G+++ +++ G RA LG PF YR GSMA I R++A+ + +
Sbjct: 325 FAMQGGRHVAAIIT------GKRA-------LGTPFTYRDKGSMAIINRFRAITRVGK-- 369
Query: 234 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+ L G L+W +W + +L +V +RNR+ ++W +F+
Sbjct: 370 ----IELTGVLAWFLWLAVHLVYLVGFRNRYVAVMSWCGSFL 407
>gi|217978753|ref|YP_002362900.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Methylocella silvestris BL2]
gi|217504129|gb|ACK51538.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Methylocella silvestris BL2]
Length = 427
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 137/274 (50%), Gaps = 19/274 (6%)
Query: 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDDR 69
+ LL V++G GPTGVE +G +++ ++ + + H+ + LIEA IL F +
Sbjct: 158 AALLTFVIIGAGPTGVELAGTIAELAHENIVEDFRHIDTRKARIVLIEAGPRILPGFTED 217
Query: 70 LRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 129
L YAT L K GV + G S ++ G ++P ++W+ GV S + L
Sbjct: 218 LSAYATRALEKLGVEVKVGAPVSECSADGVVFGGVKLPARTILWAAGVQASRAAQWLGAA 277
Query: 130 KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 189
GR+ ++ L VP +FA+GD G+ V P +A A+++G Y+ S++
Sbjct: 278 ADRVGRLLVEPDLSVPGHPQIFAIGDTVSITGPDGQPV-PGIAPAAKQEGTYVASVIK-- 334
Query: 190 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 249
+ G A + PF Y+H+GS+ATIG+ A+ D L + G L+W +W
Sbjct: 335 ARLAGKPAPA--------PFHYKHVGSLATIGKRAAIADF------GWLKVRGALAWWLW 380
Query: 250 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
++ ++ +RNR VA++W ++ G +R+
Sbjct: 381 GFIHIYFLIGFRNRLGVALSWLWAYLLGHRSARL 414
>gi|432341955|ref|ZP_19591272.1| NADH dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
gi|430773037|gb|ELB88748.1| NADH dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
Length = 461
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 133/277 (48%), Gaps = 28/277 (10%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSFD 67
E++RLL VVVG GPTGVE +GE++ R + Y + +D + L A +L FD
Sbjct: 161 ERARLLTFVVVGAGPTGVEMAGEIAQLAHRTLAGAYRTIDPRDARIILLDAAPTVLPPFD 220
Query: 68 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT---EVPYGLLVWSTGVGPSTLV 123
D+LR A L GV + G +V DVD L + D + +WS GV S L
Sbjct: 221 DKLRRAAADTLEDLGVEIQLGAMVTDVDDDGLTVRDQDGERRIEAACKIWSAGVAASPLG 280
Query: 124 KSLD----LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+ L GR+ ++ L +P +VF VGD + LP +AQVA + G
Sbjct: 281 RQLAEQTGADTDRAGRVLVEPDLTLPGHSNVFVVGDM------MNRDGLPGVAQVAIQGG 334
Query: 180 KYLFSLLNRIGKAGGGRAN-SAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 238
+Y L+ A RA+ +D PF Y GSMA I R+ A+ + + L
Sbjct: 335 RYAAQLI-----AAEVRAHRKGRDKPERAPFRYTDKGSMAMISRFHAVAKVGR------L 383
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
L G L+WL W +L +V +++R A++W +F+
Sbjct: 384 QLTGLLAWLRWLLIHLVYIVGFKSRLATAISWTWSFL 420
>gi|424910766|ref|ZP_18334143.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. viciae USDA 2370]
gi|392846797|gb|EJA99319.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. viciae USDA 2370]
Length = 421
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 134/279 (48%), Gaps = 19/279 (6%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILS 64
SEEE+ LL V++G GPTGVE +G +++ + + + +V V L+EA +L
Sbjct: 149 SEEERQALLTFVIIGAGPTGVEMAGMIAELAHKALPAEFRNVDTRKTRVLLVEAGPRVLP 208
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
F + L YA L K GV ++ G S + + T P +VW+ GV S K
Sbjct: 209 VFTEDLSAYAKEALEKLGVEVLLGTPVTACSDEGVTVGETHYPCRTVVWAAGVQASPAAK 268
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
L+ GR + L + D+F +GD + + GK V P +A A++QG Y
Sbjct: 269 WLNAAADRAGRAIVGPQLNLEDDPDIFVIGDTAAVNQENGKPV-PGIAPAAKQQGAY--- 324
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
+ K R + PF Y H G++ATIG+ A++D + K L G L
Sbjct: 325 ----VAKVIKARLDGKP---FPSPFRYSHQGNLATIGKRAAVIDFGRFK------LKGVL 371
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W +W A++ ++ R+R VA +W ++ G+ +R+
Sbjct: 372 AWWIWGLAHIYFLIGTRSRLAVAWSWLWIYLSGQHSARL 410
>gi|66824431|ref|XP_645570.1| pyridine nucleotide-disulphide oxidoreductase, NAD-binding region
domain-containing protein [Dictyostelium discoideum AX4]
gi|166240217|ref|XP_001733038.1| pyridine nucleotide-disulphide oxidoreductase, NAD-binding region
domain-containing protein [Dictyostelium discoideum AX4]
gi|60473690|gb|EAL71630.1| pyridine nucleotide-disulphide oxidoreductase, NAD-binding region
domain-containing protein [Dictyostelium discoideum AX4]
gi|165988488|gb|EDR41034.1| pyridine nucleotide-disulphide oxidoreductase, NAD-binding region
domain-containing protein [Dictyostelium discoideum AX4]
Length = 584
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 165/328 (50%), Gaps = 62/328 (18%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEIL 63
G E+E RLL+ VVVGGGP+GVEF+ EL+DF+ D+ + Y K I+VTL+EA IL
Sbjct: 268 GQPEKEIDRLLNFVVVGGGPSGVEFTAELNDFLQSDLLKTYPLAK-RINVTLVEALPHIL 326
Query: 64 SSFDDRLRHYATTQLSKS------------GVRLVRGIVKDVDSQKLILNDGTEVPYGLL 111
+ FD ++ + +L S GVR VK+ +++ ++ PYGLL
Sbjct: 327 TIFDKKIIDHVEKRLQSSNNTKIWTKTAVVGVREKEITVKNTTTKEESIH-----PYGLL 381
Query: 112 VWSTGVGPSTLVKSLDL---PKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKT 166
VW+TG P + + P R G +D++ RV ++++GD S
Sbjct: 382 VWATGNTPRKITTQIMQSIGPNIQNNRRGLVVDDYFRVAGTDGIWSIGDAS----INPSK 437
Query: 167 VLPALAQVAERQGKYLFSLLNRIGKAGGG-----RAN----------------------- 198
L AQVA +QG+YL L N++ + R N
Sbjct: 438 PLAQTAQVASQQGRYLGRLFNQLAEEMNNDLIKKRENPDAHKEEKEKQQEKLNLFNSITG 497
Query: 199 SAKDMELG---DP-FVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYL 254
S K E P F Y+H+G++A +G ++A+ + + + S +S G++++ +WRS Y
Sbjct: 498 SNKSFEEAVKEKPLFKYKHMGTLAYVGDHQAVAEFKGD-HSTTVS-EGYITYYLWRSVYF 555
Query: 255 TRVVSWRNRFYVAVNWATTFVFGRDISR 282
T+++S RNR V+ +W + VFGRDISR
Sbjct: 556 TKLLSVRNRALVSFDWLKSSVFGRDISR 583
>gi|384490289|gb|EIE81511.1| hypothetical protein RO3G_06216 [Rhizopus delemar RA 99-880]
Length = 391
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 108/190 (56%), Gaps = 17/190 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L G S EE RLLH V+VGGG TG+E++ EL DF++ D+R Y + D + ++L+EA
Sbjct: 158 LPGQSPEEIKRLLHMVIVGGGATGIEYAAELHDFLIDDLRTWYPELADKVKISLVEALPS 217
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLIL---NDGTE-VPYGLLVWSTG 116
+L F +L Y K + + + +VK+V ++L++ +D E +PYGLLVW+TG
Sbjct: 218 VLPQFSQKLIKYTEGNFRKQDITIHTKTMVKEVREKELVVKAPDDSIETIPYGLLVWATG 277
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+ LV L P++ + G +D+W+R+ +D++A GD + T
Sbjct: 278 NTTTPLVNDLIQKFPETQTHKKGLVVDDWMRLKGCEDIYAFGDATA-------TRYAPTG 330
Query: 173 QVAERQGKYL 182
QVA +QGKYL
Sbjct: 331 QVASQQGKYL 340
>gi|298244179|ref|ZP_06967985.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Ktedonobacter racemifer DSM 44963]
gi|297551660|gb|EFH85525.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Ktedonobacter racemifer DSM 44963]
Length = 441
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 141/270 (52%), Gaps = 21/270 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEA-NEILSSF 66
+ + L+ V+VG GPTGVE SG +++ + + + + H+ V L+EA IL +F
Sbjct: 163 DRQQELMTFVLVGAGPTGVEMSGAIAELAHKALARDFRHIDPRSARVILVEAMPRILPAF 222
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
++L A L+ GV + V+++D + +++ G +P ++W+ GV S K
Sbjct: 223 PEKLAQKARKALNHLGVEVRTNSPVENIDREGVVVA-GQRIPARNVIWTAGVAASPAGKW 281
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
L GR+ + L VP + +VF +GD S +++ GK LP +A VA +QG Y+ SL
Sbjct: 282 LQAEVDRAGRVKVQPDLSVPGLPNVFVIGDTSSLMQN-GKP-LPGVAPVAMQQGNYIGSL 339
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
+ + K G +A+ F Y + G++AT+GR + D + + + GFL
Sbjct: 340 I--VQKVKGSQASEPA-------FQYTNKGNLATVGRSFGIADFGR------VRIWGFLG 384
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
WL+W + ++ ++ +RNR V WA ++
Sbjct: 385 WLLWLAVHIFFLIGFRNRVLVIFQWAWAYL 414
>gi|115469590|ref|NP_001058394.1| Os06g0684000 [Oryza sativa Japonica Group]
gi|52076656|dbj|BAD45556.1| putative external rotenone-insensitive NADPH dehydrogenase [Oryza
sativa Japonica Group]
gi|113596434|dbj|BAF20308.1| Os06g0684000 [Oryza sativa Japonica Group]
gi|218198773|gb|EEC81200.1| hypothetical protein OsI_24219 [Oryza sativa Indica Group]
gi|222636105|gb|EEE66237.1| hypothetical protein OsJ_22405 [Oryza sativa Japonica Group]
Length = 588
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 101/165 (61%), Gaps = 12/165 (7%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE- 61
L ISEEEK ++LH V++GGGPTGVEF+ E+ DF++ D+ + Y ++D++ +T+I++ E
Sbjct: 216 LPNISEEEKRKILHFVIIGGGPTGVEFAAEMHDFLVEDLVKLYPAIQDFVKITIIQSGEH 275
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRG--IVK---DVDSQKLILNDGTEVPYGLLVWSTG 116
IL+ FD R+ +A + + G+ + G +VK D+ + K VPYG+ VWS G
Sbjct: 276 ILNMFDQRIATFAEMKFQRDGIEVNTGFRVVKVSDDLITMKSKSLGEVSVPYGMAVWSAG 335
Query: 117 VGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCS 157
+G ++ +D + G + +EWLRV +++A+GDC+
Sbjct: 336 IGTRPVI--MDFMQQIGQTNRRVLATNEWLRVHECDNIYAIGDCA 378
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 62/129 (48%), Gaps = 25/129 (19%)
Query: 168 LPALAQVAERQGKYLFSLLNRIGKA-------------GGGRANSAKDMELGDPFVYRHL 214
+PA AQVA +QG YL N++ + G GR N PF Y+HL
Sbjct: 472 IPATAQVAAQQGHYLAECFNKMDQCKEHPEGPLRMTGTGSGRHNFR-------PFRYKHL 524
Query: 215 GSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
G A +G +A +L + S G S WL W S Y ++ VSWR R V +W F
Sbjct: 525 GQFAPLGGEQAAAELPGDWVSMGHST----QWL-WYSVYASKQVSWRTRMLVVSDWTRRF 579
Query: 275 VFGRDISRI 283
+FGRD SRI
Sbjct: 580 IFGRDSSRI 588
>gi|449438064|ref|XP_004136810.1| PREDICTED: NAD(P)H dehydrogenase B1, mitochondrial-like [Cucumis
sativus]
gi|449520740|ref|XP_004167391.1| PREDICTED: NAD(P)H dehydrogenase B1, mitochondrial-like [Cucumis
sativus]
Length = 574
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 99/164 (60%), Gaps = 9/164 (5%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
+ +SEEE+ R LH V+VGGGPTGVEF+ EL DF D+ Y VKD + +++I++ +
Sbjct: 207 IPSLSEEERRRNLHFVIVGGGPTGVEFAAELHDFFEEDLVNLYPSVKDLVKISVIQSGDH 266
Query: 62 ILSSFDDRLRHYATTQLSKSGV------RLVRGIVKDVDSQKLILNDGTEVPYGLLVWST 115
IL++FD+R+ +A + + G+ R+V K+++ + + +P+GL++WST
Sbjct: 267 ILNAFDERISSFAEQKFLRDGIDVYTGCRVVSVSDKEIEMKVKSTGESCSMPHGLIIWST 326
Query: 116 GVGPSTLVKSLDLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCS 157
G+ +VK G R + DEWL+V Q+V+A+GDC+
Sbjct: 327 GIMTRPVVKDFMEQIGQGSRRILATDEWLQVKGAQNVYAIGDCA 370
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Query: 160 LESTGKTVLPALAQVAERQGKYLFSLLNR----IGKAGGGRANSAKDMELGDPFVYRHLG 215
+ T LPA AQVA +QG YL NR G R + PF Y+HLG
Sbjct: 452 IADTQMKSLPATAQVAAQQGAYLSRCFNRRDYCTENPEGPRRFKSSGRHQFLPFRYKHLG 511
Query: 216 SMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
A +G +A +L + S G S WL W S Y ++ VSWR R+ V +W F+
Sbjct: 512 QFAPLGGEQAAAELPGDWVSMGHST----QWL-WYSVYASKQVSWRTRYLVVSDWTRKFI 566
Query: 276 FGRDISRI 283
FGRD SRI
Sbjct: 567 FGRDSSRI 574
>gi|213965965|ref|ZP_03394155.1| NADH dehydrogenase [Corynebacterium amycolatum SK46]
gi|213951379|gb|EEB62771.1| NADH dehydrogenase [Corynebacterium amycolatum SK46]
Length = 473
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 139/273 (50%), Gaps = 32/273 (11%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY-SHVKDYIHVTLIE-ANEILSSFD 67
E+ RLL VVVG GPTGVE +G+L++ R + Y S+ V L++ A ++L F
Sbjct: 164 ERERLLTFVVVGAGPTGVELAGQLAELANRTLASSYRSYNPHAARVVLLDGAPQVLPPFG 223
Query: 68 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLI---LNDGTE--VPYGLLVWSTGVGPST 121
RL A L K GV + G +V DV+ + + + DGTE +P +WS GV S
Sbjct: 224 KRLGRKAQKSLEKMGVIVKLGAMVTDVNEEGVTYKNMKDGTEEFIPSFCKIWSAGVSASP 283
Query: 122 LVKSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
L K + GR+ ++E + ++V+ VGD S + LP +AQVA +
Sbjct: 284 LGKMIAEQTGAETDRAGRVVVNEDMTAGDYKNVYVVGDMS------NRENLPGVAQVAIQ 337
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
G+Y+ N +A G +D+ PF Y GSMAT+ R+ A+ + +
Sbjct: 338 GGEYVAE--NIAAEADG------RDVAERQPFEYFDKGSMATVSRFSAVAKMGK------ 383
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+ + GF+ W++W + +L +V +RNRF V+W
Sbjct: 384 VEVTGFIGWVLWLAVHLMFLVGFRNRFVSCVSW 416
>gi|405378829|ref|ZP_11032740.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium sp. CF142]
gi|397324639|gb|EJJ28993.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium sp. CF142]
Length = 421
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 136/275 (49%), Gaps = 19/275 (6%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDD 68
+ L +VG GPTG E +G +++ + + + ++ V LIEA +L +F +
Sbjct: 153 RDAFLTFSIVGAGPTGCELAGIIAELAHFTLPKEFRNIDTRKTRVVLIEAGPRVLPAFAE 212
Query: 69 RLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 128
L YA L K GV ++ G + + +P +VW+ GV S + L +
Sbjct: 213 DLSAYAQKALEKLGVEVLTGTPVTQCTADGVTVGENFIPSRTIVWAAGVQASHAARWLGV 272
Query: 129 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 188
P GR +++ L P + DVF +GD + + GK V P +A A++QG Y+ ++
Sbjct: 273 PADRAGRTIVEKDLTAPGLPDVFVIGDTASVMREDGKPV-PGIAPAAKQQGGYVAKVI-- 329
Query: 189 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 248
RA + G PF Y H GS+ATIG+ A++D + K L G+L+W +
Sbjct: 330 -------RARLSGKPAPG-PFKYWHQGSLATIGKSAAIIDFGRFK------LKGWLAWWI 375
Query: 249 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W A++ ++ R+RF VA NW ++ G+ +R+
Sbjct: 376 WGLAHIYFLIGTRSRFTVAWNWFWIYMTGQHSARL 410
>gi|46447443|ref|YP_008808.1| NADH2 dehydrogenase [Candidatus Protochlamydia amoebophila UWE25]
gi|46401084|emb|CAF24533.1| putative NADH2 dehydrogenase [Candidatus Protochlamydia amoebophila
UWE25]
Length = 414
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 136/272 (50%), Gaps = 22/272 (8%)
Query: 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIE-ANEILSSFDDRLRH 72
L V++G GPTGVE +G +++F R + + + + + LIE +IL SF L +
Sbjct: 155 LSFVIIGAGPTGVEMAGSMAEFAHRTLFKNFRSINPANSKIYLIEEGQQILPSFPGELAN 214
Query: 73 YATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 131
A L + GV L+ V V Q + +N+ +P +VW+ G S LVKSL +
Sbjct: 215 RALEDLKQLGVEVLLNTFVTQVTDQGVYMNEKF-LPAFTVVWAAGNEASPLVKSLGVSLD 273
Query: 132 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191
R+ + L +P +VF +GD + + S + LP +A VA +QG Y+ +L+ +
Sbjct: 274 KQSRVKVQPDLTIPGFTNVFVIGDAAAVVSSKNE-FLPGIAPVAIQQGHYVANLIKKNIL 332
Query: 192 AGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRS 251
+ PF+Y G +ATIGR +A+ L K +GFL+WL+W
Sbjct: 333 PSNRK-----------PFLYWDKGMIATIGRGRAVAILGNFK------FSGFLAWLIWCF 375
Query: 252 AYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
++ +VS+ +R V + W ++F R +R+
Sbjct: 376 IHILYLVSFGHRLLVMIQWIFLYLFNRRQARV 407
>gi|335034407|ref|ZP_08527756.1| NADH dehydrogenase [Agrobacterium sp. ATCC 31749]
gi|333794204|gb|EGL65552.1| NADH dehydrogenase [Agrobacterium sp. ATCC 31749]
Length = 421
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 135/279 (48%), Gaps = 19/279 (6%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILS 64
SEEE+ LL V++G GPTGVE +G +++ R + + +V V L+EA +L
Sbjct: 149 SEEERQALLTFVIIGAGPTGVEMAGMIAELAHRALPAEFRNVDTTKTRVLLVEAGPRVLP 208
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
F + L YA L K GV ++ G + + + T P +VW+ GV S K
Sbjct: 209 VFTEDLSTYARQALEKLGVEVLLGTPVTACTDEGVTVGETYYPCRTVVWAAGVQASPAAK 268
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
L GR+ + L + D+F +GD + + GK V P +A A++QG Y+
Sbjct: 269 WLGAAADRAGRVIVGPQLHLEDDADIFVIGDTAAVNQENGKPV-PGIAPAAKQQGAYVAK 327
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
++ + + PF Y H G++ATIG+ A++D + K L G L
Sbjct: 328 VIE----------ARLEGKPVPAPFRYSHQGNLATIGKRAAVIDFGRFK------LKGVL 371
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W +W A++ ++ R+R VA +W ++ G+ +R+
Sbjct: 372 AWWIWGLAHIYFLIGTRSRLAVAWSWLWIYLSGQHSARL 410
>gi|242096782|ref|XP_002438881.1| hypothetical protein SORBIDRAFT_10g027690 [Sorghum bicolor]
gi|241917104|gb|EER90248.1| hypothetical protein SORBIDRAFT_10g027690 [Sorghum bicolor]
Length = 584
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 99/166 (59%), Gaps = 13/166 (7%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE- 61
L IS EEK ++LH VV+GGGPTGVEF+ E+ DF++ D+ + Y ++D++ +T+I++ E
Sbjct: 212 LPNISAEEKRKILHFVVIGGGPTGVEFAAEMHDFLVEDLVKLYPAIQDFVKITIIQSGEH 271
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGT-----EVPYGLLVWST 115
IL+ FD+R+ +A + + G+ + G V V + + + VPYG+ VWS
Sbjct: 272 ILNMFDERIAAFAEQKFQRDGIEVCTGFRVIKVSDDSITMKSKSAGKEVSVPYGMAVWSA 331
Query: 116 GVGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCS 157
G+G ++ +D + G + +EWLRV + V+A+GDC+
Sbjct: 332 GIGTRPVI--MDFMQQIGQTNRRALATNEWLRVRECEGVYAIGDCA 375
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 169 PALAQVAERQGKYLFSLLNRIGKA-----GGGRANSAKDMELGDPFVYRHLGSMATIGRY 223
PA AQVA +QG+YL N++ K G R PF Y+H G A +G
Sbjct: 470 PATAQVAAQQGQYLAECFNKMEKCKEDPEGPLRMTGGSGRHFFRPFRYKHFGQFAPLGGE 529
Query: 224 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+A +L + S G S WL W S Y ++ VSWR R V +W F+FGRD SRI
Sbjct: 530 QAAAELPGDWVSMGHST----QWL-WYSVYASKQVSWRTRVLVVSDWTRRFIFGRDSSRI 584
>gi|345879972|ref|ZP_08831531.1| hypothetical protein HMPREF9431_00195 [Prevotella oulorum F0390]
gi|343923910|gb|EGV34592.1| hypothetical protein HMPREF9431_00195 [Prevotella oulorum F0390]
Length = 432
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 139/273 (50%), Gaps = 21/273 (7%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILS 64
+ E + L++ V+VGGGP+GVE +G L++ + + Y+ + +H+ LI A + +LS
Sbjct: 155 NPERRQALMNIVIVGGGPSGVEIAGALAEMKRTILPRDYADLDASKMHIYLINAGDRLLS 214
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVK-DVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+ D A L + GV ++ G + D + +L+L D + ++W +G+ +T+
Sbjct: 215 AMDKTSSAKAEKGLEELGVEIMSGCMALDYANGQLLLKDHASIASETVIWVSGIKANTIE 274
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYL 182
GGRI +D + RV + DV+A+GD C ++ P LAQVA +Q +
Sbjct: 275 GIPATSIGRGGRIVVDRFNRVKGMTDVYAIGDQCLIEGDAAYPHGHPQLAQVAIQQAANV 334
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
L R K M PF Y +LG MATIGR KA+V++ + L G
Sbjct: 335 AHNLER--------QQEGKPMR---PFNYNNLGVMATIGRKKAVVEIGK------LKFGG 377
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
F +WL+W +L ++ RN+ V +NW +++
Sbjct: 378 FFAWLLWLVVHLRSILGVRNKTIVLLNWMWSYL 410
>gi|256424048|ref|YP_003124701.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Chitinophaga pinensis DSM 2588]
gi|256038956|gb|ACU62500.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Chitinophaga pinensis DSM 2588]
Length = 448
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 145/287 (50%), Gaps = 30/287 (10%)
Query: 3 LAGISEE--EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEA 59
+A I+++ E+ +L V+ GGGPTGVE SG L++ +R+ Y ++ + L+
Sbjct: 150 IASITKDPIERKKLTTIVIAGGGPTGVEVSGMLAELRKYVIRKDYPELEGQGGEIYLVNG 209
Query: 60 NE-ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV 117
E +L + + + L + GV++ ++ VKD ++ILN+G + L+W+ GV
Sbjct: 210 GESLLEPMSPKSQKHTYNALRRLGVKIKLKTRVKDFVDDQVILNNGDTIHTSTLIWAAGV 269
Query: 118 GPSTLVKSLDLPKS-PGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVA 175
+ L + + + + PG R+ D + RV V D++A+GD C +S P LAQVA
Sbjct: 270 T-AYLHEGIPIASTGPGRRMMTDAFNRVIGVDDIYAIGDTCLTKTDSNFPEGHPQLAQVA 328
Query: 176 ERQGKYL---FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQN 232
+QG+ L FSL+ D + PF Y G+MA IGR A+ D+
Sbjct: 329 LQQGRNLAKNFSLM--------------VDNKQLKPFSYVDKGTMAIIGRNNAVADI--- 371
Query: 233 KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
S L GF++W +W ++ ++++RNR NW + F RD
Sbjct: 372 -PSPKLHFNGFIAWAMWLFVHVMALINYRNRLKTMYNWTVAY-FTRD 416
>gi|374998861|ref|YP_004974360.1| NADH dehydrogenase FAD-containing subunit [Azospirillum lipoferum
4B]
gi|357426286|emb|CBS89186.1| NADH dehydrogenase FAD-containing subunit [Azospirillum lipoferum
4B]
Length = 473
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 140/271 (51%), Gaps = 33/271 (12%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEANE 61
EE++ L+ V+VGGGPTGVE +G +++ RY+ +D+ + L+EA
Sbjct: 168 EEQAMLMTVVIVGGGPTGVELAGAVAELT------RYALARDFRRIDPRSARILLVEAGP 221
Query: 62 -ILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L +F + L YA L GV ++ G V+++++ + + G +P G +VW GV
Sbjct: 222 RLLGTFPEHLSRYAQHALGWLGVTVMTGQAVENIEAGGVTIG-GRFIPAGTMVWGAGVAA 280
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
S + L + GRI +D L VP + VFA+GD + GK LP LAQVA++QG
Sbjct: 281 SPAGRWLGVETDRAGRIRVDADLSVPGLDGVFALGDTALGAADDGKP-LPGLAQVAKQQG 339
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
++L + L AN + + PF +++ G+ A +GR A+ D +
Sbjct: 340 QHLGTALA---------ANILRGKPM-PPFRFKNRGNTAIVGRSAAVFDFGTRQ------ 383
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
L G+L+W++W ++ +V + R V++ W
Sbjct: 384 LKGWLAWILWAVVHVYLLVGFEKRLLVSMQW 414
>gi|427391755|ref|ZP_18885979.1| hypothetical protein HMPREF9233_01482 [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425731722|gb|EKU94535.1| hypothetical protein HMPREF9233_01482 [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 448
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 143/283 (50%), Gaps = 28/283 (9%)
Query: 2 FLAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-A 59
L G E R VV GGGPTGVE +G ++ D + V D + +TL++ A
Sbjct: 147 LLDGHDFNEDGRPFRIVVCGGGPTGVETAGAFAELRKYDFGDLFPAVSPDALEITLVDMA 206
Query: 60 NEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILN--DGTE---VPYGLLVW 113
IL FD+ + A L GV+++ G V++V+++++ L D E + L+VW
Sbjct: 207 PTILGPFDEDSQKAAKRALEDRGVKVMLGEAVREVEAERIKLENMDTKEEHWIDANLIVW 266
Query: 114 STGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
S+GVG + LP+ GR+ +DE LRV VFA+GD + G+ LP LAQ
Sbjct: 267 SSGVGVPKVASEWGLPQGARGRLQVDENLRVEGADGVFAIGDVA----VIGEKGLPQLAQ 322
Query: 174 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 233
A + GK++ ++ NS + + F Y+ LGSMAT+G A+ ++
Sbjct: 323 PAIQGGKHVAKVIT----------NSLQGKST-ENFEYKDLGSMATVGAGFAVAEI---- 367
Query: 234 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 276
+K +L+G +WL+W ++ ++ S R R AVN + ++
Sbjct: 368 -AKLPNLSGLPAWLIWNLIHVMQLESGRERLASAVNLMSKYIL 409
>gi|149197833|ref|ZP_01874882.1| NADH dehydrogenase [Lentisphaera araneosa HTCC2155]
gi|149139054|gb|EDM27458.1| NADH dehydrogenase [Lentisphaera araneosa HTCC2155]
Length = 420
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 134/271 (49%), Gaps = 26/271 (9%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSFD 67
E S+ L V+VG GPTGVE +G + + + +S + V LIEA IL++FD
Sbjct: 150 EMSKHLTFVIVGAGPTGVELAGAIGEMNRYTLGDEFSQLDVSKTRVLLIEAGPRILAAFD 209
Query: 68 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
+ A + L K GV + G V +D Q + L D T + ++W+ GV S L KSL
Sbjct: 210 EDQSQRAQSDLVKLGVDVRLGQAVTHIDDQCVKLGDET-IQTSTVLWAAGVEASRLGKSL 268
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
+ GR+ I+E L + +F GD + + G+ LP +A VA +QG+YL LL
Sbjct: 269 PVELDRAGRVPIEEDLSMKQFPYIFVAGDQANFTGKDGRP-LPGMAPVAMQQGRYLAKLL 327
Query: 187 --NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
GK GG F Y G MATIGR A+ ++ + L GF+
Sbjct: 328 VAREKGKDIGG-------------FKYVDKGKMATIGRSSAIA------QAGKIKLEGFI 368
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+WL W ++ + ++NRF+V V W +++
Sbjct: 369 AWLAWLFIHILYLSGFKNRFFVFVQWTWSYL 399
>gi|149280183|ref|ZP_01886306.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Pedobacter sp. BAL39]
gi|149229020|gb|EDM34416.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Pedobacter sp. BAL39]
Length = 435
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 146/281 (51%), Gaps = 41/281 (14%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEA-NEILSSF 66
+EK +L + V+ GGGPTGVE +G L++ V + Y + + + L++A +L+
Sbjct: 153 KEKEKLGNVVIAGGGPTGVEIAGMLAEMGGNIVSKDYPTARKGVGKIYLVDALGTLLAPM 212
Query: 67 DDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV--GPSTLV 123
+ + A LSK GV+ ++ VKD K+I DG + L+W++GV P+
Sbjct: 213 SKKSQDEAYQVLSKLGVQIMLNTTVKDYTGDKVIFGDGQSITAATLIWASGVIGRPAP-- 270
Query: 124 KSLDLPK---SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVL---PALAQVAER 177
LP+ + G RI +DE+ +V +++VFA+GD S L+ + + P LAQVA +
Sbjct: 271 ---GLPEEVIARGRRIMVDEYNKVNGLENVFALGDIS--LQQSDEQFPKGHPQLAQVALQ 325
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGD---PFVYRHLGSMATIGRYKALVDLRQNKE 234
Q L A++ +M G PF Y GSMA I ++KA+VDL
Sbjct: 326 QSALL--------------AHNFLNMAEGKSLRPFKYNDKGSMAIIAKFKAVVDL----- 366
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
KG GF +WLVW ++ + +RN++ +A+NW +FV
Sbjct: 367 PKGF-FKGFFAWLVWLFIHIIPIAGFRNKWMLAMNWFWSFV 406
>gi|398341752|ref|ZP_10526455.1| NADH dehydrogenase [Leptospira inadai serovar Lyme str. 10]
Length = 434
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 150/282 (53%), Gaps = 25/282 (8%)
Query: 8 EEEKS---RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EI 62
EE+K LL+ V++GGGPTGVE +G +++ VR + + + +TLIEA+ +
Sbjct: 152 EEDKEIAKSLLNYVIIGGGPTGVELAGSIAELSHEIVRNEFHTIDPALSKITLIEASPRL 211
Query: 63 LSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPST 121
L +F L +A +L K GV ++ G V ++D + + L +G + ++W+ GV +
Sbjct: 212 LMAFHPNLSGFAKNRLEKRGVEVLVGTKVINIDEEGVHL-EGRTIRCSNIIWAAGVQANA 270
Query: 122 LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 181
+ ++L +P GR+ +DE+ + +VF +GD + + +++ + LP ++ VA +QG+Y
Sbjct: 271 ISQALGVPLDRTGRVIVDEFCNIEGHPEVFVIGDIANFTKNSERP-LPGVSPVAMQQGRY 329
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
+ SL+ +G G + ++ F Y GSMATIGR A+ + + +
Sbjct: 330 VASLI--LGDLKGKKRSA---------FKYVDKGSMATIGRQDAVAQVGPWR------MK 372
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
GF W W +L V ++N+ + + W +++ R +R+
Sbjct: 373 GFFGWAAWLFVHLFYQVGFKNKVSILITWFWSYLTFRAEARL 414
>gi|344203700|ref|YP_004788843.1| NADH dehydrogenase (ubiquinone) [Muricauda ruestringensis DSM
13258]
gi|343955622|gb|AEM71421.1| NADH dehydrogenase (ubiquinone) [Muricauda ruestringensis DSM
13258]
Length = 438
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 138/277 (49%), Gaps = 24/277 (8%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEA-NEILSSF 66
E+ L++ V+VGGGPTGVE +G L++ + + Y + + L++ + IL +
Sbjct: 158 HERDALMNFVIVGGGPTGVELAGALAEIKKGILPKDYPDLDTRRAQINLVQGGDRILPAM 217
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
++ A L + GV + + I V D D +K+ N T LVW+ GV L K
Sbjct: 218 SEKASEKAEKFLEELGVNVWKNIRVTDYDGKKVTTNTKTIFEAETLVWAAGVKAVGL-KG 276
Query: 126 LDLPK--SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
LD+ + S R+ ++E+ ++ ++DVFA+GD + + P +AQ A +QG+ L
Sbjct: 277 LDVRELLSRDNRLKVNEFHQIVGLEDVFAIGDVAQMVTEEFPHGHPMMAQPAIQQGRNL- 335
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
G D + PFVY+ GSMAT+GR KA+VDL + G
Sbjct: 336 ----------GDNLVLLMDGKPMKPFVYKDKGSMATVGRNKAVVDLPK------FRFQGV 379
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRD 279
+W VW +L ++ +RNR V +NW ++ F R+
Sbjct: 380 FAWFVWMFVHLYFLIGFRNRVVVFINWVYNYIRFDRE 416
>gi|329962845|ref|ZP_08300730.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides fluxus
YIT 12057]
gi|328529402|gb|EGF56315.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides fluxus
YIT 12057]
Length = 427
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 136/267 (50%), Gaps = 21/267 (7%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILS 64
+EEE+ RL+ +VGGG TG+E +G L++ + Q + + + + + LI+A+ +LS
Sbjct: 158 NEEERKRLMTFAIVGGGATGIELAGALAEMRKFVLPQDFPDLDINEMRIILIDASPRLLS 217
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+F D L K V + + V ++ +L+L+DGT + + W GV +++
Sbjct: 218 AFSDASSRDVEDYLHKRNVEIRLNARVVSYENNELVLSDGT-IETKNVFWVAGVKANSIQ 276
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
PG R+ +D + R+ D+FA+GD + + S P + Q A +Q + L
Sbjct: 277 GLPAEAYGPGNRLKVDSYNRLVDFPDIFAIGDTALMVSSEYPKGHPQVVQPAIQQARNLI 336
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
L+R+ + R PF+YR+ GSMATIGR A+V+L + L GF
Sbjct: 337 YNLHRMQEGLPLR-----------PFIYRNKGSMATIGRNHAVVELEK------LRFGGF 379
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+W VW +L +V +NR ++ ++W
Sbjct: 380 PAWAVWLFIHLMSIVGVKNRLFIFIDW 406
>gi|375143577|ref|YP_005006018.1| NADH dehydrogenase (ubiquinone) [Niastella koreensis GR20-10]
gi|361057623|gb|AEV96614.1| NADH dehydrogenase (ubiquinone) [Niastella koreensis GR20-10]
Length = 450
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 36/276 (13%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSF 66
EE+ + L+ V+VGGGPTGVE +G LS+ +++ KDY + I+ + ++ S
Sbjct: 165 EEQLNSLMDFVIVGGGPTGVEIAGALSEL------RKHVFPKDYKELDFIKMDIHLIQSG 218
Query: 67 DDRLR---HYATTQ----LSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVG 118
D L+ H A+T L K+GV++ + VK D ++L++G ++ L+W+ GV
Sbjct: 219 DHILKGMSHEASTHALKFLEKAGVQVWLNRRVKSFDGYTVVLDNGEKLITRTLIWAAGVT 278
Query: 119 PSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 178
+ + + G R+ +DE+ RV +++FA+GD + + P LAQ A +Q
Sbjct: 279 GAPIKGLSAECITSGNRLKVDEYNRVAGYENIFALGDIAEMATAELPEGYPMLAQPAIQQ 338
Query: 179 GKYLFSLLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLR-QNKE 234
G+ L ++ + G P FVY GS+ATIGR KA+ D++ NKE
Sbjct: 339 GRLL--------------GDNLPKLVAGKPLKKFVYTDKGSLATIGRNKAVADVKFFNKE 384
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
K G +W +W +L ++ ++NR V +NW
Sbjct: 385 FK---TQGLFAWFIWLFVHLFSIIGFKNRLLVFINW 417
>gi|255716452|ref|XP_002554507.1| KLTH0F06974p [Lachancea thermotolerans]
gi|238935890|emb|CAR24070.1| KLTH0F06974p [Lachancea thermotolerans CBS 6340]
Length = 516
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 154/295 (52%), Gaps = 31/295 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E+ RLL VVVGGGPTGVE +GEL D+I +D+++ V + + + L+EA +L+ F
Sbjct: 225 DPERRRLLTIVVVGGGPTGVETAGELQDYIDQDLKRFMPSVAEEVQIHLVEALPVVLNMF 284
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLVWSTGV 117
+ +L YA L K+ +++ +R V V+ L+ E +PYG L+W+TG
Sbjct: 285 ERKLTSYAQDVLQKTRIKVHLRTAVARVEEDHLVAKTKAEDGATTEQTIPYGTLIWATGN 344
Query: 118 GPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
++V L +P + G +++ L V ++FAVGD + + LP AQ
Sbjct: 345 KALSIVTDLFKKIPAQNDSKRGLAVNQNLLVKGSNNIFAVGDNAF-------SGLPPTAQ 397
Query: 174 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD---------PFVYRHLGSMATIGRYK 224
VA +Q +YL +L+++ K+ A A+ E D PF Y H G++A +G K
Sbjct: 398 VAHQQAEYLAKVLSKMAKSPNFHAELAQRKEKVDLFFEQKGIKPFNYTHYGALAYLGAEK 457
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
A+ ++ K S + G L++ VWR Y ++S R+RF V +W F RD
Sbjct: 458 AIANITYGKRS-FYTGGGVLTFYVWRVTYAMMILSARSRFKVIADWLKLAFFKRD 511
>gi|444319388|ref|XP_004180351.1| hypothetical protein TBLA_0D03320 [Tetrapisispora blattae CBS 6284]
gi|387513393|emb|CCH60832.1| hypothetical protein TBLA_0D03320 [Tetrapisispora blattae CBS 6284]
Length = 532
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 156/300 (52%), Gaps = 35/300 (11%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E+ RLL VVVGGGPTGVE +GEL D++ +D+++ + + + L+EA +L+ F
Sbjct: 237 DPERKRLLSIVVVGGGPTGVETAGELQDYVHQDLQKFLPALAQEVQIHLVEALPSVLNMF 296
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLI----LNDG----TEVPYGLLVWSTGV 117
+ +L YA + L S ++L ++ V V++ L+ L DG T +PYG L+W+TG
Sbjct: 297 EKKLSSYAQSVLEDSSMKLWLKTAVSKVEADHLVASTKLEDGTTKETTIPYGTLIWATGN 356
Query: 118 GPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
++ SL LP+ R G ++E+L+V ++VFA+GD + + LP AQ
Sbjct: 357 KVRPVISSLFKKLPEQKDARRGLIVNEFLQVNGTRNVFAIGDNAF-------SGLPPTAQ 409
Query: 174 VAERQGKYLFSLLNRIGKAG--------GGRANSAKDMELGD-----PFVYRHLGSMATI 220
VA +Q YL +RI G ++ EL PF Y H G++A +
Sbjct: 410 VAHQQADYLAQSFDRIAHLPEFQTELLEGSADSTTTATELFKKNSFRPFKYHHQGALAYL 469
Query: 221 GRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
G KA+ ++ +S + G ++ +WR YL ++S R+RF V +W F RD
Sbjct: 470 GAEKAIANIVLGGKSI-YTGGGAFTFYIWRVTYLAMILSARSRFKVITDWLKLSFFKRDF 528
>gi|317505341|ref|ZP_07963269.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella salivae
DSM 15606]
gi|315663555|gb|EFV03294.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella salivae
DSM 15606]
Length = 424
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 137/273 (50%), Gaps = 21/273 (7%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILS 64
+E K L++ +VGGGP+GVE +G L++ + + Y + +H+ LI A +L
Sbjct: 155 NEARKQALMNIAIVGGGPSGVEIAGVLAEMKQTILPRDYPDLDTSCMHIYLINATPRLLG 214
Query: 65 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+ +R A L + GV + +V D ++L+L DG + ++W +G+ + +
Sbjct: 215 AMSERSSREAEKALKELGVEVMTNCMVTDYVDKELVLKDGQRISAETVIWVSGIKANNID 274
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYL 182
GRI +D + RV ++DV+A+GD C + P LAQVA +Q K L
Sbjct: 275 GIPTESIGHAGRILVDRFNRVKGLKDVYAIGDQCIVEGDEAYPYGHPQLAQVAIQQAKTL 334
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
L R K D E PF Y +LG+MATIGR KA+V++ + L G
Sbjct: 335 AKNLIRQEKG---------DTE--QPFSYHNLGTMATIGRKKAVVEIGK------LKFGG 377
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
F +WL+W +L ++ +N+ V +NW +++
Sbjct: 378 FFAWLLWLIVHLRSILGVKNKTIVFLNWMWSYM 410
>gi|424871453|ref|ZP_18295115.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. viciae WSM1455]
gi|393167154|gb|EJC67201.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. viciae WSM1455]
Length = 421
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 143/276 (51%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VG GPTGVE +G +++ + + + ++ V L+EA +L +F +
Sbjct: 153 RDALLTFTIVGAGPTGVELAGIIAELAHFTLPKEFRNIDTRKTRVVLVEAGPRVLPTFAE 212
Query: 69 RLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L K GV + G V + ++ + + + T V +VW+ GV S + LD
Sbjct: 213 ELSAYAQKALEKLGVEIHLGKPVTECNADGVKIGE-TFVASRTIVWAAGVTASPAARWLD 271
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+ GR+ +++ L P + +VF VGD + + GK V P +A A++QG Y+ ++
Sbjct: 272 VASDRAGRVVVEKDLSAPGLPNVFVVGDTASVMREDGKPV-PGIAPAAKQQGGYVAKVIR 330
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ G A + PF Y H GS+ATIG+ A++D + K L G+L+W
Sbjct: 331 --ARISGKPAPA--------PFRYWHQGSLATIGKSAAIIDFGRIK------LKGWLAWW 374
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 375 IWGLAHIYFLIGTRSRFSVAWSWLWIYLSGQHSARL 410
>gi|19552680|ref|NP_600682.1| NADH dehydrogenase, FAD-containing subunit [Corynebacterium
glutamicum ATCC 13032]
gi|62390348|ref|YP_225750.1| NADH dehydrogenase [Corynebacterium glutamicum ATCC 13032]
gi|418246862|ref|ZP_12873251.1| NADH dehydrogenase [Corynebacterium glutamicum ATCC 14067]
gi|4688668|emb|CAB41413.1| NADH dehydrogenase [Corynebacterium glutamicum]
gi|21324233|dbj|BAB98858.1| NADH dehydrogenase, FAD-containing subunit [Corynebacterium
glutamicum ATCC 13032]
gi|41325685|emb|CAF21474.1| NADH DEHYDROGENASE [Corynebacterium glutamicum ATCC 13032]
gi|354509058|gb|EHE81998.1| NADH dehydrogenase [Corynebacterium glutamicum ATCC 14067]
gi|385143590|emb|CCH24629.1| NADH dehydrogenase, FAD-containing subunit [Corynebacterium
glutamicum K051]
Length = 467
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 139/272 (51%), Gaps = 31/272 (11%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSFD 67
E+ RLL VVVG GPTGVE +G+L++ R + Y + + + L++ A ++L F
Sbjct: 164 ERERLLTFVVVGAGPTGVELAGQLAEMAHRTLAGEYKNFNTNSAKIILLDGAPQVLPPFG 223
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLI--LNDGTE--VPYGLLVWSTGVGPSTL 122
RL A L K GV + + +V +VD+ + DG E + +WS GV S L
Sbjct: 224 KRLGRNAQRTLEKMGVNVRLNAMVTNVDATSVTYKTKDGEEHTIESFCKIWSAGVAASPL 283
Query: 123 VK----SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 178
K + GR+ +++ L V ++VF VGD Y LP +AQVA +
Sbjct: 284 GKLVAEQTGVETDRAGRVMVNDDLSVGDQKNVFVVGDMMNY------NNLPGVAQVAIQS 337
Query: 179 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 238
G+Y + +I GR+N+ + + F Y GSMATI R+ A+V + + +
Sbjct: 338 GEY---VAEQIEAEVEGRSNTER-----EAFDYFDKGSMATISRFSAVVKMGK------V 383
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+ GF+ W++W + ++ +V +RNRF A++W
Sbjct: 384 EVTGFIGWVLWLAVHIMFLVGFRNRFVSAISW 415
>gi|424882372|ref|ZP_18306004.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. trifolii WU95]
gi|392518735|gb|EIW43467.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. trifolii WU95]
Length = 421
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 144/277 (51%), Gaps = 23/277 (8%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDD 68
+ LL +VG GPTGVE +G +++ + + + ++ V L+EA + +L +F +
Sbjct: 153 RDALLTFTIVGAGPTGVELAGIIAELAHFTLPKEFRNIDTRKTRVVLVEAGQRVLPTFAE 212
Query: 69 RLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L K GV + G V + ++ + + + T V +VW+ GV S + L
Sbjct: 213 ELSAYAQKALEKLGVEIHLGKPVTECNADGVKIGE-TFVASRTIVWAAGVTASPAARWLG 271
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+ GR+ +++ L P + DVF VGD + + GK V P +A A++QG Y+ ++
Sbjct: 272 VAADRAGRVVVEKDLSAPGLPDVFVVGDTASVMREDGKPV-PGIAPAAKQQGGYVAKVIR 330
Query: 188 -RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
RI G+ A PF Y H GS+ATIG+ A++D + K L G+L+W
Sbjct: 331 ARI----SGKPTPA-------PFRYWHQGSLATIGKSAAIIDFGRIK------LKGWLAW 373
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 374 WIWGLAHIYFLIGTRSRFSVAWSWLWIYLSGQHSARL 410
>gi|421099887|ref|ZP_15560530.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
borgpetersenii str. 200901122]
gi|410797044|gb|EKR99160.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
borgpetersenii str. 200901122]
Length = 422
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 146/284 (51%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN- 60
L+G E K+ LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA
Sbjct: 149 LSGDPEVVKA-LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEAAP 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L +FD L + +L GV ++ G V D++ + + L +G + ++W+ GV
Sbjct: 208 RLLMTFDPSLGEFTKKRLESRGVEVLTGTRVIDINERGVQL-EGKMITTQTVIWAAGVQA 266
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+T+ +L + GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG
Sbjct: 267 NTIASTLGVVLDRGGRVIVDEFCNIEGHSEVFVIGDIANYSKGIERP-LPGVSPVAMQQG 325
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+Y+ +L+ G N + F Y GSMATIGR A+ + L
Sbjct: 326 RYVAALIQ------GDLKNKKR-----KSFRYVDKGSMATIGRTDAVAQVGV------LK 368
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G WL W +L V ++N+ + + W +++ R +R+
Sbjct: 369 MKGLFGWLAWLFVHLFYQVGFKNKVTILITWVWSYIAFRAEARV 412
>gi|398330939|ref|ZP_10515644.1| NADH dehydrogenase [Leptospira alexanderi serovar Manhao 3 str. L
60]
Length = 422
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 146/284 (51%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN- 60
L+G E K+ LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA
Sbjct: 149 LSGDPEVVKA-LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEAAP 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L +FD L + +L GV ++ G V D++ + + L +G +P ++W+ GV
Sbjct: 208 RLLMAFDPSLGEFTKKRLESRGVEVLTGTRVIDINERGVQL-EGKMIPTETVIWAAGVQA 266
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+ + +L + GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG
Sbjct: 267 NGIASTLGVTLDRGGRVIVDEFCNIEGHPEVFVIGDIANYSKDLERP-LPGVSPVAMQQG 325
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+Y+ +L+ G N + F Y GSMATIGR A+ + L
Sbjct: 326 RYVAALIQ------GDLKNKKR-----KSFRYIDKGSMATIGRTDAVAQVGV------LK 368
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G WL W +L V ++N+ + + W +++ R +R+
Sbjct: 369 MKGLFGWLAWLFVHLFYQVGFKNKVTILLTWVWSYIAFRAEARV 412
>gi|390564740|ref|ZP_10245504.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Nitrolancetus hollandicus Lb]
gi|390172013|emb|CCF84830.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Nitrolancetus hollandicus Lb]
Length = 456
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 130/270 (48%), Gaps = 19/270 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFD 67
+ K +LL V+ GGG GVE + + D + +R + +HV LI + N ++
Sbjct: 171 DRKRQLLTFVIAGGGANGVEVAAHIRDLVYGAIRYYQNIEPADLHVILIHSGNRLIPDLP 230
Query: 68 DRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
RL +YA L + G+ L V V+ + L DG + +V S GV P+ +V +L
Sbjct: 231 SRLGYYAERLLRRRGIEILFDRRVSRVEPDAVYLTDGEVIRADTIVGSVGVMPNPMVANL 290
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
+P P G I ++ L VP +V+A+GD + ++ P AQ A R+ K L+
Sbjct: 291 PVPHDPRGAIAVNNDLSVPGYPNVWALGDNAFVVDPYTGKPYPLTAQTAVREAK----LV 346
Query: 187 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
R A R K PF YR +G+M ++G A+ +R GL+ +GF++W
Sbjct: 347 AR-NIAASLRGEPLK------PFTYRTIGAMVSLGHRSAVAYIR------GLTFSGFIAW 393
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTFVF 276
++R+ YL ++ W R V +W +F
Sbjct: 394 WLYRTYYLLQLPRWDKRLRVVFDWTLDLLF 423
>gi|408370711|ref|ZP_11168486.1| NADH dehydrogenase [Galbibacter sp. ck-I2-15]
gi|407743948|gb|EKF55520.1| NADH dehydrogenase [Galbibacter sp. ck-I2-15]
Length = 451
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 134/277 (48%), Gaps = 24/277 (8%)
Query: 4 AGISEEEKSR--LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEA- 59
A I+ ++K R L + V+VGGGP GVE +G L++F + + Y I ++ LIEA
Sbjct: 168 AAITCDDKERDALTNFVIVGGGPAGVEMAGALAEFCKYILPKDYPEYPSSIMNIYLIEAI 227
Query: 60 NEILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVG 118
+E+L + D+ L V+ L+ V + D ++ + L+W+ GV
Sbjct: 228 DELLGTMSDKASSKTLKYLEDLNVKVLLNEAVSNYDGNEVTTKSDKTILAKNLIWTAGV- 286
Query: 119 PSTLVKSLDLPK-SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
+D G RI D L+V +++FA+GD + + P +AQ A +
Sbjct: 287 KGQFPNGIDEKHIVRGNRIKTDANLKVEGYENIFAIGDIAALISEERPKGHPQVAQAAIQ 346
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
QGK+L L +I K E PF Y+ GS+AT+G+ KA+ DL +
Sbjct: 347 QGKWLGDSLLKIIKN-----------EAPKPFEYKDKGSLATVGKRKAVADLGK------ 389
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
+ AG+ +WL+W +L + +RNR V NWA ++
Sbjct: 390 MKFAGYFAWLLWSIVHLMSISGFRNRLMVGFNWAVSY 426
>gi|384914566|ref|ZP_10015350.1| putative NADH dehydrogenase, FAD-containing subunit
[Methylacidiphilum fumariolicum SolV]
gi|384527451|emb|CCG91218.1| putative NADH dehydrogenase, FAD-containing subunit
[Methylacidiphilum fumariolicum SolV]
Length = 421
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 137/268 (51%), Gaps = 18/268 (6%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILS 64
+ +E+ + + V+VGGGPTGVE +G L++ + +++ + ++ + L+EA IL
Sbjct: 154 NPKEREKYMTFVIVGGGPTGVELAGALAELSKKALKKDFRNIDPANTRIILLEAAPRILL 213
Query: 65 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
S+++RL A ++L K GV +V V+ ++ K I G + ++W+ GV L
Sbjct: 214 SYNERLSALARSRLEKMGVEIMVSKPVEKIEKGK-IFYKGGMIEASTILWAAGVCAMDL- 271
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
LD+PK GRI + E L VP ++F +GD + +PA+A A + GKY
Sbjct: 272 PGLDVPKVKDGRIKVLEDLTVPGHPEIFVIGDMAMV------PGVPAVAPAAIQMGKYAA 325
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
++R GR + +D F Y G M T+GR KA+V G+
Sbjct: 326 YEISRRVACQVGR-RTGRDFLKPRAFHYFDKGMMTTLGRGKAIVQFHN------FGFNGY 378
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWA 271
L+W+VW ++ ++S+RNR V + WA
Sbjct: 379 LAWIVWLLVHIITLISFRNRLTVLIQWA 406
>gi|452845067|gb|EME47000.1| hypothetical protein DOTSEDRAFT_85608 [Dothistroma septosporum
NZE10]
Length = 438
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 141/295 (47%), Gaps = 38/295 (12%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE- 61
L S+E++ LLH +VVGGGPTGVE S E+SD D+ + Y + + +T+ +A
Sbjct: 168 LPNTSDEKQRELLHIIVVGGGPTGVEISAEMSDLFNDDMSKLYPLLAGKMTITIHDAAPF 227
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120
IL +F+ LR +A + SK GV + +K V++ + + G+++W+ G
Sbjct: 228 ILGAFEKALREHAISSFSKRGVNVKPDSKIKKVEADSITTEADGRIGCGMVLWTAGNKQC 287
Query: 121 TLVKSLDLPKSPG-GRIGIDEWLRV-----------PSVQDVFAVGDCSGYLESTGKTVL 168
LV LD+ K+ RI D+ L V + DV+A+GD + K L
Sbjct: 288 PLVDKLDVCKTDKVPRILTDQHLHVLRASGPYDEDKTPLPDVYALGDAA----DIKKYFL 343
Query: 169 PALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVD 228
P A+VA ++ +YL S+LN K GR F Y+ +A IG + +V
Sbjct: 344 PTTAEVAVQKAEYLASVLN---KGTDGRK----------VFEYKQKALVAYIGGHDGVVA 390
Query: 229 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
R + G +W WRS L SWR + + + W ++ G++I+R+
Sbjct: 391 GRPD-------WNGARAWTAWRSKNLLWTRSWRRKIMIMIYWGLDWMGGKEIARL 438
>gi|384564809|ref|ZP_10011913.1| NADH dehydrogenase, FAD-containing subunit [Saccharomonospora
glauca K62]
gi|384520663|gb|EIE97858.1| NADH dehydrogenase, FAD-containing subunit [Saccharomonospora
glauca K62]
Length = 431
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 132/271 (48%), Gaps = 25/271 (9%)
Query: 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSSFDDRLRH 72
L V VGGG TGVE EL D + DV + Y + + + L+EA + IL + L
Sbjct: 161 LTFVFVGGGYTGVEAIAELQDMAV-DVLEGYPEIDRSEMRWVLVEAMDRILGTVSADLAE 219
Query: 73 YATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 131
ATT+L+ G+ + G +++ +++ + L+DGT++P LVW G P ++ L LP
Sbjct: 220 LATTELTARGIDIRTGTLLESAENRVMQLSDGTKLPADTLVWVAGTRPQPILGELGLPVD 279
Query: 132 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS--LLNRI 189
GR+ +D+ +RV ++++ GDC+ + P AQ A RQ + L LL
Sbjct: 280 ERGRLVVDDTMRVDGHANIWSAGDCAAVPDPEKGGTCPPTAQHAVRQAQQLGENLLLTLR 339
Query: 190 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 249
G+A G PF Y G T+G+ KA+ E G + G L+W +
Sbjct: 340 GRA-------------GKPFRYNSRGEFVTLGKNKAV------GEVLGHKVDGVLAWTLR 380
Query: 250 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
R+ Y T++ +W V +WA FG D+
Sbjct: 381 RAYYATQIPTWNRTVRVLGDWAVGMPFGHDV 411
>gi|452840973|gb|EME42910.1| hypothetical protein DOTSEDRAFT_72370 [Dothistroma septosporum
NZE10]
Length = 426
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 146/290 (50%), Gaps = 39/290 (13%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEIL 63
G++ ++ +L ++VGGG G+E + EL D D+R Y H++ + + + + A +L
Sbjct: 162 GLTNAQQRDILRILIVGGGAIGIEATAELFDLWQHDMRHIYPHLEGKLSIEVHDVAPGLL 221
Query: 64 SSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
+FD RL YA +L GV + ++ V++ + + E YG+L+W+TG G ++L
Sbjct: 222 GNFDKRLGEYAAQKLEGRGVEIRTSSHIEKVEAGAIWTKERGEERYGMLIWATGNGVNSL 281
Query: 123 VKSLDLPKSPG-GRIGIDEWLRV-----PSVQDVFAVGDCS---GYLESTGKTVLPALAQ 173
V LD+ K+ RI D LRV V+DVFA+GD + GY LP LA+
Sbjct: 282 VDKLDVKKTEKLPRILTDRRLRVFGKDDQLVEDVFALGDSADIDGY-------SLPTLAE 334
Query: 174 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 233
VA ++ +YL + LN A D E + F Y+ ++A +G++ ++ RQ
Sbjct: 335 VAVQKAEYLANELN------------ATD-EPTNAFEYKSRPNIAYLGQHDGVIGGRQ-- 379
Query: 234 ESKGLSLAGFLSWLVWRSAYLTR-VVSWRNRFYVAVNWATTFVFGRDISR 282
G +W+ WRS + SWR + ++W V GRDI+R
Sbjct: 380 -----EWTGQSAWIAWRSGSIYHWPRSWRRTLMIGISWLFNRVGGRDIAR 424
>gi|329954915|ref|ZP_08295932.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides clarus
YIT 12056]
gi|328527019|gb|EGF54030.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides clarus
YIT 12056]
Length = 428
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 134/271 (49%), Gaps = 20/271 (7%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILS 64
++EE+ RL+ +VGGG TG+E +G L++ + Q Y + + + + LI+ A+ +LS
Sbjct: 158 NQEERKRLMTFAIVGGGATGIELAGALAEMRKFVLPQDYPDLNINEMRIILIDGASRLLS 217
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+F ++ T L V + + V + + KL+L++G + + W GV ++L
Sbjct: 218 AFSEKSSQEVTDYLRSRDVEIKLNARVMNYEDNKLVLSEGPVIDTKNVFWVAGVKANSLQ 277
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
PG R+ +D + R+ D+FA+GD + P + Q A +Q + L
Sbjct: 278 GLPAEAYGPGNRLKVDNYNRLYEYPDIFAIGDTALMTSDVFPKGHPQVVQPAIQQARNLI 337
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
L RI + + L PFVY GSMATIGR A+V+L K L GF
Sbjct: 338 INLQRIEQG----------LPL-QPFVYHSKGSMATIGRNHAVVEL------KKLRFGGF 380
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
+W VW +L +V +NR ++ V+W ++
Sbjct: 381 PAWAVWLFIHLMSIVGVKNRLFIFVDWMWSY 411
>gi|418299313|ref|ZP_12911147.1| NADH dehydrogenase [Agrobacterium tumefaciens CCNWGS0286]
gi|355535114|gb|EHH04404.1| NADH dehydrogenase [Agrobacterium tumefaciens CCNWGS0286]
Length = 421
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 135/279 (48%), Gaps = 19/279 (6%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILS 64
SE+E+ LL V++G GPTGVE +G +++ + + + +V V L+EA +L
Sbjct: 149 SEDERQALLTFVIIGAGPTGVEMAGMIAELAHKALPPEFRNVDTRKTRVLLVEAGPRVLP 208
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
F + L YA L K GV ++ G S + + T P +VW+ GV S K
Sbjct: 209 VFTEDLSAYAKEALEKLGVEVLLGTPVTACSDEGVTVGETYYPCRTVVWAAGVQASPAAK 268
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
L+ GR + L + D+F +GD + + GK V P +A A++QG Y
Sbjct: 269 WLNAAADRAGRAIVGPHLNLEDDADIFVIGDTAAVNQENGKPV-PGIAPAAKQQGAY--- 324
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
+ K R + L PF Y H G++ATIG+ A++D + K L G L
Sbjct: 325 ----VAKVIKARLDGKP---LPAPFRYSHQGNLATIGKRAAVIDFGRFK------LKGVL 371
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W +W A++ ++ R+R VA +W ++ G+ +R+
Sbjct: 372 AWWIWGLAHIYFLIGTRSRLAVAWSWLWIYLSGQHSARL 410
>gi|218131053|ref|ZP_03459857.1| hypothetical protein BACEGG_02656 [Bacteroides eggerthii DSM 20697]
gi|317477061|ref|ZP_07936303.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides eggerthii
1_2_48FAA]
gi|217986757|gb|EEC53090.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides eggerthii
DSM 20697]
gi|316906854|gb|EFV28566.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides eggerthii
1_2_48FAA]
Length = 428
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 135/274 (49%), Gaps = 26/274 (9%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILS 64
+EEE+ RL+ +VGGG TG+E +G L++ + Q Y + + + + LI+ A +LS
Sbjct: 158 NEEERKRLMTFAIVGGGATGIELAGALAEMRKFVLPQDYPDLNINEMRIILIDGAPRLLS 217
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+F ++ L K V + + V + + +L+L++G + + W GV ++L
Sbjct: 218 AFSEKSSREVMEYLGKRNVEVKLNARVINYEGNELVLSEGPVIDTKNVFWVAGVKANSLQ 277
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
PG R+ +D + R+ ++FA+GD + P + Q A +Q + L
Sbjct: 278 GLPSEAYGPGNRLKVDSYNRLCEYSNIFAIGDTALMSSDAYPKGHPQVVQPAIQQARNLI 337
Query: 184 SLLNRIGKAGGGRANSAKDMELG---DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 240
L R ME G PF+YR+ GSMATIGR A+V+L++ L
Sbjct: 338 VNLQR--------------MEQGLPLQPFIYRNKGSMATIGRNHAVVELKK------LRF 377
Query: 241 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
GF +W VW +L +V +NR ++ V+W ++
Sbjct: 378 GGFPAWAVWLFVHLMSIVGVKNRLFIFVDWMWSY 411
>gi|269837682|ref|YP_003319910.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Sphaerobacter thermophilus DSM 20745]
gi|269786945|gb|ACZ39088.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Sphaerobacter thermophilus DSM 20745]
Length = 451
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 138/276 (50%), Gaps = 20/276 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSF 66
EE+ LL VVG G TGVE L D + ++ Y ++ + + LIEA + IL
Sbjct: 189 EERRWLLTFAVVGAGATGVELVASLDDLLRNNLLPYYPSLRGEEPRIVLIEAMDTILPGT 248
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
R+R A +L G+ + ++ V V + L+ G E+ L+W+ G+ P+ + S
Sbjct: 249 TPRMRAIAERRLKDLGIDIRLKTAVAGVRNGALVTRAGDEIAAATLIWTAGIRPNPVAAS 308
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
L + KS GRI +DE+LR+PS +VFA+GD + + LPA A VA R+G +
Sbjct: 309 LPVEKSRDGRIVVDEYLRIPSAPNVFALGDNAFVPDQNSGAPLPANASVAVREGAAVGRN 368
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
L R+ + +E PFV+R G M +GR A + ++ G +
Sbjct: 369 LVRL--------LTGHPLE---PFVFRSPGEMIALGRGHAAATI------GPVAFGGLPA 411
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
WLVWR +L++++ R+R V ++W + R I+
Sbjct: 412 WLVWRVFHLSQIMGVRSRVGVTLDWTAALLSRRYIA 447
>gi|116252956|ref|YP_768794.1| transmembrane NADH dehydrogenase [Rhizobium leguminosarum bv.
viciae 3841]
gi|115257604|emb|CAK08701.1| putative transmembrane NADH dehydrogenase [Rhizobium leguminosarum
bv. viciae 3841]
Length = 421
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 142/278 (51%), Gaps = 25/278 (8%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VG GPTGVE +G +++ + + + ++ V L+EA +L +F +
Sbjct: 153 RDALLTFTIVGAGPTGVELAGIIAELAHFTLPKEFRNIDTRKTRVVLVEAGPRVLPTFAE 212
Query: 69 RLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L K GV + G V + ++ + + + T V +VW+ GV S + L
Sbjct: 213 ELSAYARKALEKLGVEIHLGKPVTECNADGVKIGE-TFVASRTIVWAAGVTASPAAQWLG 271
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ +++ L P + +VF VGD + + GK V P +A A++QG Y+ ++
Sbjct: 272 VPADRAGRVVVEKDLSAPGLPEVFVVGDTASVMREDGKPV-PGIAPAAKQQGGYVAKVIR 330
Query: 188 R--IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
+GK PF Y H GS+ATIG+ A++D + K L G+L+
Sbjct: 331 ARILGKPAPA------------PFRYWHQGSLATIGKSAAIIDFGRIK------LKGWLA 372
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W +W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 373 WWIWGLAHIYFLIGTRSRFSVAWSWLWIYLSGQHSARL 410
>gi|443671822|ref|ZP_21136923.1| putative NADH dehydrogenase [Rhodococcus sp. AW25M09]
gi|443415674|emb|CCQ15261.1| putative NADH dehydrogenase [Rhodococcus sp. AW25M09]
Length = 440
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 142/279 (50%), Gaps = 36/279 (12%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSF 66
E + LL VVVG G TGVE +G++ D R + + D + VTL++ E+L +F
Sbjct: 154 ELRKELLSFVVVGAGATGVELAGQIRDLAHRYFAGSFPGIDPDDVTVTLVDGVKEVLPAF 213
Query: 67 DDRLRHYATTQLSKSGVRLVRG-IVKDV-----DSQKLILNDGTEVPYGLLVWSTGVGPS 120
+L YA T+L K+GV +V G +V D+ Q + P ++WS GV S
Sbjct: 214 GGKLSAYARTKLEKAGVDVVTGGMVTDIADDVVTVQDVDTKTSRTYPAKTVIWSAGVQAS 273
Query: 121 TLVKSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
L ++ GR+ + + L V S +D+FA+GD + + LP + VA
Sbjct: 274 ELAATVAERTGCETDRAGRLLVHDDLTVGSAKDIFAIGDVTSLHK------LPGQSPVAM 327
Query: 177 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
+QG+++ ++ IGK ++ G PF Y GSM+ +GR+ A+ L
Sbjct: 328 QQGRHVAKMI--IGK-----------VDAGTPFEYTDKGSMSIVGRFSAVARLFGK---- 370
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+ ++G ++WL+W + +L +V +RNR+ V+W T+++
Sbjct: 371 -VDMSGPIAWLMWLAVHLMYLVGFRNRYVAVVSWMTSYI 408
>gi|82703122|ref|YP_412688.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Nitrosospira multiformis ATCC 25196]
gi|82411187|gb|ABB75296.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Nitrosospira multiformis ATCC 25196]
Length = 462
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 140/286 (48%), Gaps = 32/286 (11%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE------- 58
+ E + +L V+ GGGPTGVE +G L++ +R+R H +DY +T ++
Sbjct: 182 VDEMRRKKLFSVVIAGGGPTGVEIAGMLAE-----MRKRILH-RDYPELTGLQPRIHLVD 235
Query: 59 -ANEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTG 116
A+ +L + + Y L K GV + + VKD + +I +DG + +L+W+ G
Sbjct: 236 SASALLGAMSVHSQKYTYEVLLKMGVEIHLNTQVKDYINDTVIFSDGKTLETQILLWTAG 295
Query: 117 VGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVA 175
V G R+ ++E+ +V +D++A+GD C + P LAQVA
Sbjct: 296 VTGKIFEGLPHECYGRGNRLLVNEYNKVSGTRDIYAIGDTCLLTSDRNFPQGHPQLAQVA 355
Query: 176 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 235
+QG+ L + L + ++ L PF Y GS+A IGR KA+ D +
Sbjct: 356 LQQGRNLAANLVAV----------IRNQPL-TPFAYNDKGSLAIIGRNKAVADFPK---- 400
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDIS 281
L L GF++W +W +L +V++RNRF NWA F F +D S
Sbjct: 401 PALHLEGFMAWGIWLFVHLFSLVTYRNRFMTLANWAVAF-FTKDQS 445
>gi|299141906|ref|ZP_07035041.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella oris C735]
gi|298576757|gb|EFI48628.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella oris C735]
Length = 424
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 21/272 (7%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILS 64
+E + L++ +VGGGP+GVE +G L++ + + Y + + + LI A +L
Sbjct: 155 NEACRQALMNIAIVGGGPSGVEIAGALAEMKRTILPRDYPDLDTSCMRIYLINAAPRLLG 214
Query: 65 SFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+ ++ A L + GV ++ G +V D +LIL DG +P ++W +G+ + +
Sbjct: 215 AMAEKSSREAEKALKELGVEIMAGCMVTDYVDHELILKDGNHLPVETVIWVSGIRANHID 274
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYL 182
GGRI D + RV +++V+A+GD C + P LAQVA +Q + L
Sbjct: 275 GIPADSIGRGGRIITDRFNRVKGMENVYAIGDQCLIEGDKAYPQGHPQLAQVAMQQAENL 334
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
L R K E PF YR+LG+MATIGR KA+V++ + L G
Sbjct: 335 AMNLKRQDKN-----------EQEHPFSYRNLGTMATIGRKKAVVEIGR------LKFGG 377
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
F +WL+W +L ++ RN+ V +NW ++
Sbjct: 378 FFAWLLWLVVHLRSILGVRNKTIVFLNWMWSY 409
>gi|226359938|ref|YP_002777716.1| NADH dehydrogenase [Rhodococcus opacus B4]
gi|226238423|dbj|BAH48771.1| NADH dehydrogenase [Rhodococcus opacus B4]
Length = 478
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 130/277 (46%), Gaps = 30/277 (10%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH--VTLIEANEILSSFD 67
E++R L VVVG GPTGVE +G++++ R + + + V L A ++L F
Sbjct: 163 ERARQLTFVVVGAGPTGVELAGQIAELAHRTLDGTFRSISPTAARVVLLDAAPQVLPPFG 222
Query: 68 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPSTL 122
+L AT L GV + G IV DVD L + D + VWS GV S L
Sbjct: 223 AKLGTAATRTLQSKGVEVELGAIVTDVDEHGLTVKDADGHTRRIEAACKVWSAGVSASPL 282
Query: 123 VKSLD----LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 178
K L P GRI + L +P +VF +GD + LP +AQ A +
Sbjct: 283 AKQLAEQTGAPLDRAGRISVGADLTLPGQPNVFVIGDM------MSRDQLPGVAQTAIQG 336
Query: 179 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 238
G+Y + R A+ + PF YR GSMAT+ R+ A+ + +
Sbjct: 337 GRYAARHIAR-------EADGTSLPQDRAPFRYRDKGSMATVCRFSAVAQVGR------F 383
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+GF++WL+W + +L +V +R+R ++W ++F+
Sbjct: 384 EFSGFIAWLLWLAVHLVYIVGFRSRIATLLSWTSSFL 420
>gi|386822424|ref|ZP_10109639.1| NADH dehydrogenase, FAD-containing subunit [Joostella marina DSM
19592]
gi|386423670|gb|EIJ37501.1| NADH dehydrogenase, FAD-containing subunit [Joostella marina DSM
19592]
Length = 451
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 139/284 (48%), Gaps = 38/284 (13%)
Query: 4 AGISEEEKSR--LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHV 54
A I+ + K R L + V+VGGGP GVE +G L++F +Y KDY +++
Sbjct: 168 AAITCDNKERDALTNFVIVGGGPAGVEMAGALAEFC------KYILPKDYPEYPASIMNI 221
Query: 55 TLIEA-NEILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLV 112
LIEA +E+LS+ D+ L V+ L+ V + D +++ + L+
Sbjct: 222 YLIEAIDELLSTMSDKASSKTLKYLEDLNVKVLLNEAVSNYDGKEVTTKSDKTILAKNLI 281
Query: 113 WSTGVGPSTLVKSLDLPKSP-GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 171
W+ GV +D G RI + L+V +++FA+GD + + P +
Sbjct: 282 WTAGV-KGQFPNGIDGKHVVRGNRIKTNANLKVEGYENIFAIGDIAALISKETPKGHPQV 340
Query: 172 AQVAERQGKYL-FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLR 230
AQ A +QGKYL S+LN I S K PF Y+ GS+AT+G+ KA+ DL
Sbjct: 341 AQTAIQQGKYLGDSILNIINN------KSIK------PFKYKDKGSLATVGKRKAVADLG 388
Query: 231 QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
+ K AG+ +WL+W +L + +RNR V NWA ++
Sbjct: 389 KFK------FAGYFAWLLWSVVHLMSISGFRNRLMVGFNWAVSY 426
>gi|421886145|ref|ZP_16317324.1| NADH dehydrogenase protein [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|379984274|emb|CCF89597.1| NADH dehydrogenase protein [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
Length = 438
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 135/268 (50%), Gaps = 18/268 (6%)
Query: 18 VVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEANE-ILSSFDDRLRHYAT 75
V+VGGGPTGVE SG +++ + ++ + + + L+EA + +L++F + L Y
Sbjct: 167 VIVGGGPTGVELSGTIAELARKTLKNDFRSIDPTETRIILVEAGQRLLTAFPESLSEYTR 226
Query: 76 TQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGR 135
L K GV + G S + ++ G +P ++W+ GV S + L GR
Sbjct: 227 QSLEKLGVEVSFGQPVTECSAEGVVYGGQPLPAKTIIWAAGVTASPAARWLKTEADRAGR 286
Query: 136 IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGG 195
+ + L +P ++F +GD + G+ ++P +A A+++G+Y+ L+
Sbjct: 287 VIVGADLTLPLHPEIFVIGDTAAVTGEDGR-MIPGIAPAAKQEGQYVAKLI--------- 336
Query: 196 RANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLT 255
++ + + PF YRH G++ATIGR A+VD+ + L L G ++W W+ +L
Sbjct: 337 QSRLKDEKPVLKPFRYRHQGNLATIGRGLAVVDMGR------LKLRGAMAWWFWKIIHLY 390
Query: 256 RVVSWRNRFYVAVNWATTFVFGRDISRI 283
++ RNR VA++W G +RI
Sbjct: 391 FLIGTRNRLSVAISWIWNHSIGYRGARI 418
>gi|311745191|ref|ZP_07718976.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Algoriphagus sp. PR1]
gi|126577713|gb|EAZ81933.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Algoriphagus sp. PR1]
Length = 443
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 138/271 (50%), Gaps = 20/271 (7%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSS 65
+E + L++ V+VGGGPTGVE +G +++ + + Y + D + V LIEA ++L +
Sbjct: 163 QENRKSLMNVVIVGGGPTGVELAGAMAELRNNVLPKDYPELNFDNMKVVLIEAGPKLLGA 222
Query: 66 FDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
+ ++ L + GV ++ V+D D +++ + + L+W+ G+ P+ +
Sbjct: 223 MSKESQDHSLQYLEELGVEVMLDTKVQDYDGEEVHIEGKESISTQTLLWAAGIKPNYIEG 282
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
+P GRI ++E+ V ++ ++ +GD + E P +AQVA +Q + L
Sbjct: 283 LSKEHYAPNGRIFVNEFNEVSGLEGIYVLGDVALQTEENFPKGHPQVAQVALQQAENLGK 342
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
L I K +A F Y+ LGSMAT+GR +A+VDL + G +
Sbjct: 343 NLINISKGQEMKA-----------FHYKDLGSMATVGRKRAVVDL------PFMKFQGMM 385
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+WL W +L ++ +N+ ++ ++WA ++
Sbjct: 386 AWLTWLFVHLMAILGVKNKLFIFIDWAWNYL 416
>gi|119356447|ref|YP_911091.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Chlorobium phaeobacteroides DSM 266]
gi|119353796|gb|ABL64667.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Chlorobium phaeobacteroides DSM 266]
Length = 435
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 141/276 (51%), Gaps = 29/276 (10%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFD 67
E+ +LL V+VGGGPTGVE +G + + + + Y ++ + + ++EA IL SF
Sbjct: 151 ERKKLLTFVIVGGGPTGVELAGSIGEMSRYTLSKFYRNIDPKLTRIFIVEAAPRILGSFS 210
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
L AT L K GV++ +V DVD+ + + + + ++W+ GV + K++
Sbjct: 211 PELTSKATRSLEKLGVQVWTSSMVTDVDANGVQIGN-ERIEAATVLWAAGVTAIAIGKNM 269
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
L GRI ++E L +P ++FA GD + + GKT LP LA VA +QG+ +
Sbjct: 270 GLETDHLGRILVNEDLSIPGHPELFAGGDLAHFELENGKT-LPGLAPVALQQGRAI---- 324
Query: 187 NRIGKAGGGRANSAKDMELG--DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
GR N D++ PF YR G MATIG+ KA+V++ L G L
Sbjct: 325 --------GR-NILLDLKKKARKPFRYRDKGQMATIGKNKAIVEI------GSLKFDGIL 369
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWA---TTFVFG 277
+W W ++ + S+R+R +V + W TF +G
Sbjct: 370 AWFTWLLVHIYFLTSFRHRVFVLLQWGWSYFTFSYG 405
>gi|158316665|ref|YP_001509173.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Frankia
sp. EAN1pec]
gi|158112070|gb|ABW14267.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Frankia sp. EAN1pec]
Length = 504
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 141/278 (50%), Gaps = 35/278 (12%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLI---EANEILSSF 66
+ +R + VVVG GPTGVE +G++++ R +RQ + + D +I A +L +F
Sbjct: 162 DAARYMTFVVVGAGPTGVEMAGQIAELSHRTLRQDFRRI-DTTKARIILLDAAPSVLGTF 220
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLIL--NDGTE--VPYGLLVWSTGVGPST 121
++L AT++L K GV + G V +VDS+ + + +DGT + +W+ GV S
Sbjct: 221 GEKLAAKATSKLEKLGVEIQLGARVVNVDSRGIDVEDSDGTRRRIESVCKIWAAGVAASP 280
Query: 122 LVKSLDLPKSP----GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
L K L GRI + L +P +VF VGD + LP +AQVA +
Sbjct: 281 LGKQLAEQSGAVLDRAGRIQVQPDLTLPGHPEVFVVGDMATLDR------LPGVAQVAIQ 334
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
GKY ++ + G N F Y+ GSMATI R+ A+ + KG
Sbjct: 335 GGKYAAKTISTRLRGGPPMRN----------FEYKDKGSMATISRFSAVASI------KG 378
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+ L+GF++WL+W + +L ++ +++R ++W +F+
Sbjct: 379 VQLSGFVAWLMWLAVHLVYIIGFKHRVTTLLHWTVSFI 416
>gi|366989435|ref|XP_003674485.1| hypothetical protein NCAS_0B00240 [Naumovozyma castellii CBS 4309]
gi|342300349|emb|CCC68108.1| hypothetical protein NCAS_0B00240 [Naumovozyma castellii CBS 4309]
Length = 536
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 156/295 (52%), Gaps = 31/295 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSF 66
+ E+ RLL VVVGGGPTGVE +GEL D++ D+R+ + D + + L+EA I L+ F
Sbjct: 245 DPERKRLLSIVVVGGGPTGVETAGELQDYVNEDLRKFLPSLADEVQIHLVEALPIVLNMF 304
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLIL----NDGT----EVPYGLLVWSTGV 117
+ +L YA T L K+ +++ ++ V V++ L+ +DGT +PYG L+W+TG
Sbjct: 305 EKKLSSYAQTVLEKTSIKIHLKTAVSKVEANHLVAKTKNDDGTTTEETIPYGTLIWATGN 364
Query: 118 GPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
+V L +P+ + I+ +L+V ++VFA+GD + LP AQ
Sbjct: 365 KARPIVTDLFKKIPEQAKNTRALTINNYLQVIGTKNVFAIGDNAF-------IGLPPTAQ 417
Query: 174 VAERQGKYL---FSLLNRIGKAGGGRANSAKDMEL------GDPFVYRHLGSMATIGRYK 224
VA +Q +YL F ++++ + AN +L F Y H G++A +G K
Sbjct: 418 VAHQQAEYLAKSFDKMSQLPQFHEKLANRKNKYDLLFEENKFKKFNYIHFGALAYLGSEK 477
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
A+ ++ K S + G +++ +WR +YL ++S R RF V +W F RD
Sbjct: 478 AIANITYGKRSL-YTGGGLITFYIWRLSYLAMLLSARLRFKVITDWMKLAFFKRD 531
>gi|182414397|ref|YP_001819463.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Opitutus terrae PB90-1]
gi|177841611|gb|ACB75863.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Opitutus terrae PB90-1]
Length = 436
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 145/281 (51%), Gaps = 15/281 (5%)
Query: 7 SEEEKSR-LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIE-ANEIL 63
S+ +K R L+ +VVGGGPTGVE +G ++ + + + + V LIE A +L
Sbjct: 154 SDPQKRRELMTLIVVGGGPTGVELAGTFAELARTVLVRDFDRIDPSKARVLLIEGAPRVL 213
Query: 64 SSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
+ F L A QL + GV + G VK + ++ + DG E+ G+++W+ GV S L
Sbjct: 214 AHFPPDLSASAQRQLERLGVEVRVGKHVKAIRHHEVEMPDG-EIIRGIVIWAAGVSASPL 272
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
+ L + GRI + L +P +VF +GD + G+ V+P ++ A + G++
Sbjct: 273 TQQLGVETDRAGRIKVLPDLSLPGHPEVFVLGDLVTLTDPKGQ-VVPGVSPAAMQMGEHA 331
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
LL + GR ++ PFVY GSMATIGR KA+ ++ + L +G
Sbjct: 332 VKLLAEEIR---GRTSTTNAAAGRAPFVYWDKGSMATIGRSKAVAEIGR------LHFSG 382
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ +W+ W +L +V +R++F V V W +++ + +RI
Sbjct: 383 YPAWMAWLFVHLIFLVGFRSKFSVFVQWVYSYLTYKRGARI 423
>gi|397165971|ref|ZP_10489418.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Enterobacter radicincitans DSM 16656]
gi|402842751|ref|ZP_10891157.1| pyridine nucleotide-disulfide oxidoreductase [Klebsiella sp. OBRC7]
gi|396092392|gb|EJI89955.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Enterobacter radicincitans DSM 16656]
gi|402278645|gb|EJU27702.1| pyridine nucleotide-disulfide oxidoreductase [Klebsiella sp. OBRC7]
Length = 436
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 135/268 (50%), Gaps = 18/268 (6%)
Query: 18 VVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEANE-ILSSFDDRLRHYAT 75
V+VGGGPTGVE SG +++ + ++ + + + L+EA + +L++F + L Y
Sbjct: 165 VIVGGGPTGVELSGTIAELARKTLKNDFRSIDPTETRIILVEAGQRLLTAFPESLSEYTR 224
Query: 76 TQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGR 135
L K GV + G S + ++ G +P ++W+ GV S + L GR
Sbjct: 225 QSLEKLGVEVSFGQPVTECSAEGVVYGGQPLPAKTIIWAAGVTASPAARWLKTEADRAGR 284
Query: 136 IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGG 195
+ + L +P ++F +GD + G+ ++P +A A+++G+Y+ L+
Sbjct: 285 VIVGADLTLPLHPEIFVIGDTAAVTGEDGR-MIPGIAPAAKQEGQYVAKLI--------- 334
Query: 196 RANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLT 255
++ + + PF YRH G++ATIGR A+VD+ + L L G ++W W+ +L
Sbjct: 335 QSRLKDEKPVLKPFRYRHQGNLATIGRGLAVVDMGR------LKLRGAMAWWFWKIIHLY 388
Query: 256 RVVSWRNRFYVAVNWATTFVFGRDISRI 283
++ RNR VA++W G +RI
Sbjct: 389 FLIGTRNRLSVAISWIWNHSIGYRGARI 416
>gi|145295599|ref|YP_001138420.1| hypothetical protein cgR_1526 [Corynebacterium glutamicum R]
gi|417970784|ref|ZP_12611715.1| NADH dehydrogenase [Corynebacterium glutamicum S9114]
gi|140845519|dbj|BAF54518.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344045080|gb|EGV40754.1| NADH dehydrogenase [Corynebacterium glutamicum S9114]
Length = 467
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 139/272 (51%), Gaps = 31/272 (11%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSFD 67
E+ RLL VVVG GPTGVE +G+L++ R + Y + + + L++ A ++L F
Sbjct: 164 ERERLLTFVVVGAGPTGVELAGQLAEMAHRTLAGEYKNFNTNSAKIILLDGAPQVLPPFG 223
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLI--LNDGTE--VPYGLLVWSTGVGPSTL 122
RL A L K GV + + +V +VD+ + DG E + +WS GV S L
Sbjct: 224 KRLGRNAQRTLEKIGVTVRLNAMVTNVDATSVTYKTKDGEEHTIESFCKIWSAGVAASPL 283
Query: 123 VK----SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 178
K + GR+ +++ L V ++VF VGD Y LP +AQVA +
Sbjct: 284 GKLVAEQTGVETDRAGRVMVNDDLSVGDQKNVFVVGDMMNY------NNLPGVAQVAIQS 337
Query: 179 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 238
G+Y + +I GR+N+ + + F Y GSMATI R+ A+V + + +
Sbjct: 338 GEY---VAEQIEAEVEGRSNTER-----EAFDYFDKGSMATISRFSAVVKMGK------V 383
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+ GF+ W++W + ++ +V +RNRF A++W
Sbjct: 384 EVTGFIGWVLWLAVHIMFLVGFRNRFVSAISW 415
>gi|375336814|ref|ZP_09778158.1| NADH dehydrogenase, FAD-containing subunit [Succinivibrionaceae
bacterium WG-1]
Length = 458
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 140/285 (49%), Gaps = 43/285 (15%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIEA-NE 61
EK L+ V+VGGGP+GVE +G +++ +RY KDY +++TL++ N
Sbjct: 158 EKQESLNVVIVGGGPSGVEIAGAIAEM------RRYVLPKDYPDMNTSIMNITLVQGDNR 211
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120
+L + A L K V++ + +V D K+ +NDGT + L+W GV
Sbjct: 212 LLPGMSQQSSAKALEFLKKMNVQIRLNTLVTDYKDNKVYMNDGTSIETRNLIWVGGVDCE 271
Query: 121 TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTV---LPALAQVAER 177
+V D G RI +D V ++++A+GD + +E+ + P +AQ A +
Sbjct: 272 PIVGIHDTQMGRGKRILVDGTNLVKDSKNIYAIGDIA-LMENVDEAFPKGHPQMAQPAIQ 330
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKE 234
QG L A + K +E G P F Y+ LG MATIG+ KA+ ++
Sbjct: 331 QGALL--------------AKNLKAIEQGKPTKEFKYKDLGCMATIGKNKAVAEIF---- 372
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA-TTFVFGR 278
G+ GF +W++W +L ++ RN+F+V ++W + F + R
Sbjct: 373 --GIKFGGFFAWILWMGVHLMSILGVRNKFFVFMDWVWSYFTYDR 415
>gi|449301942|gb|EMC97951.1| hypothetical protein BAUCODRAFT_408622 [Baudoinia compniacensis
UAMH 10762]
Length = 569
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 155/303 (51%), Gaps = 55/303 (18%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
S EE RLLH VVVGGGPTGVEF+GEL DF D+R+ + + HVTL+EA +L S
Sbjct: 271 SPEEIKRLLHMVVVGGGPTGVEFAGELQDFFEHDLRKWIPEIANNFHVTLVEALPSVLPS 330
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGT---------EVPYGLLVWST 115
F L Y + + + + +VK+V ++K I + T ++PYGLLVW+T
Sbjct: 331 FSKNLIDYTEQTFKEETIEIRTKTMVKNV-TEKYIEAEFTDASGKKQLEQIPYGLLVWAT 389
Query: 116 GVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 171
G +VK L +P R G ++E+L V ++++AVGDC+ + + T
Sbjct: 390 GNALRPVVKDLMSQIPAQKDSRRGLAVNEYLVVKGTENIWAVGDCA--VANYAPT----- 442
Query: 172 AQVAERQGKYLFSLLNRIGK---------------------AGGGRANSAKDM------- 203
AQVA ++G +L L N++ K A N+ KD+
Sbjct: 443 AQVAAQEGAFLARLFNQMAKTEQIELELAKLSDDQSKAPKEARDQIFNTMKDLQKRLRRV 502
Query: 204 -ELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRN 262
++G PF Y H GS+A IG KA+ D+ + + L+ G L+++ WRSAYL+ S +
Sbjct: 503 KQMG-PFEYSHQGSLAYIGSEKAVADI--SWLTGNLATGGQLTYVFWRSAYLSMCFSSKC 559
Query: 263 RFY 265
Y
Sbjct: 560 SSY 562
>gi|444308702|ref|ZP_21144345.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Ochrobactrum intermedium M86]
gi|443487901|gb|ELT50660.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Ochrobactrum intermedium M86]
Length = 459
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 137/275 (49%), Gaps = 19/275 (6%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSFDD 68
++ L V++GGGPTGVE +G +++ +++ + + V L+EA + +L F +
Sbjct: 179 RAALQTFVIIGGGPTGVELAGTIAELAHLTLKRDFRSIDPSATRVVLMEAGQRLLPVFPE 238
Query: 69 RLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 128
+L Y L K GV + G S ++ +G ++ ++W+ GV S + L+
Sbjct: 239 KLSEYTRKSLEKLGVEVKLGKPVTACSADGVIVNGEDIAATTILWAAGVQASPAARWLNA 298
Query: 129 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 188
GR+ + + VP D+F +GD + GK V P LA A++QG+Y+ L+
Sbjct: 299 EADRAGRVIVGPDMTVPGHSDIFVIGDTAASTGGDGKPV-PGLAPAAKQQGQYVARLI-- 355
Query: 189 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 248
G R D + PF YRH G++ATIG A+VD+ + K L G +W +
Sbjct: 356 -----GQRMKGLNDEK---PFHYRHQGNLATIGSRLAVVDMGRFK------LRGAPAWWM 401
Query: 249 WRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W+ ++ ++ +NR VA++W T G SR+
Sbjct: 402 WKLIHIYFLIGAQNRLSVALSWMWTHSIGYRGSRL 436
>gi|340030497|ref|ZP_08666560.1| NADH dehydrogenase protein [Paracoccus sp. TRP]
Length = 426
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 144/281 (51%), Gaps = 24/281 (8%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILS 64
+EE++ LL V+G GPTGVE G +++ R + + + + + L+EA +L
Sbjct: 148 NEEQRQALLTFAVIGAGPTGVELVGIIAELAHRILPREFRRIDTRQSRILLLEAGPRVLP 207
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
+F D+L YA L + GV ++ G S I+ DG + ++W+ GV S
Sbjct: 208 AFSDKLSDYAKRALERHGVEVMTGAPVTECSDGGIVLDGRFISARTVIWAAGVQASRAKD 267
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
L GR+ + L +P +F +GD + ++ES G++V P +A A++QGK+
Sbjct: 268 WLGAEADRAGRVVVTPELTLPGDPAIFVLGD-TAHVESGGQSV-PGVAPAAKQQGKHAAR 325
Query: 185 LLNR--IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
+ G+ G G PF YR +G++ATIGR A+++ + + + G
Sbjct: 326 TIRARLAGRQGPG------------PFRYRDMGNLATIGRNAAVIEFGRFR------MTG 367
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ +W +W A++ ++ R+R +VA++W F+ G++ +R+
Sbjct: 368 WFAWWIWGIAHIYFLIGTRSRLFVALSWLWVFLSGQNSARL 408
>gi|427382542|ref|ZP_18879262.1| hypothetical protein HMPREF9447_00295 [Bacteroides oleiciplenus YIT
12058]
gi|425729787|gb|EKU92638.1| hypothetical protein HMPREF9447_00295 [Bacteroides oleiciplenus YIT
12058]
Length = 478
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 132/265 (49%), Gaps = 20/265 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSF 66
E + RL+ V+VGGG TG+E SG L++ + Q Y + + + + L++ A +LS+F
Sbjct: 208 ERRKRLMTFVIVGGGATGIELSGALAEMKKFVLPQDYPDLDINLMRIILVDGAPRLLSAF 267
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
++ L K V + + V + ++ + NDG + + W GV +++
Sbjct: 268 SEKSSEEVADYLLKRDVEIRTSVQVSNYENGVITFNDGNTLETMNVFWVAGVRANSIDGL 327
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
PG R+ +D + RV ++FA+GD + + + P + Q A +Q + L
Sbjct: 328 AKEAYGPGNRLQVDNYNRVQGYTNIFAIGDTALMISTEYPKGHPQVVQPAIQQARNLIGN 387
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
L+R+ + +E+ PFVY + GSMATIGR A+V+L K L GFL+
Sbjct: 388 LDRVERG----------LEM-QPFVYHNKGSMATIGRNHAVVEL------KKLRFGGFLA 430
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNW 270
W W +L +V +NR ++ V+W
Sbjct: 431 WAAWLFIHLMSIVGVKNRLFIFVDW 455
>gi|92117133|ref|YP_576862.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Nitrobacter hamburgensis X14]
gi|91800027|gb|ABE62402.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Nitrobacter hamburgensis X14]
Length = 488
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 134/275 (48%), Gaps = 33/275 (12%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLI 57
I E+ LL V+VGGGPTG+E +G ++ RY+ V+D+ + L+
Sbjct: 174 AIDARERQDLLSFVIVGGGPTGIELAGAAAEI------ARYALVRDFRCIDPRASRIVLV 227
Query: 58 EANE-ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWST 115
EA IL + + L YA + L + GV + +V D + +++ G +P ++W+
Sbjct: 228 EAGPRILPALPEALSAYAQSSLERMGVTVRTSTMVTACDEKGVVVATGERIPALTVIWAA 287
Query: 116 GVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
GV S + G I ++ L +P +VFA+GD + + + +P +A A
Sbjct: 288 GVKASPAAAWIKADCDRAGHIKVNPDLSIPDQPNVFAIGDTATVFWN--ERTVPGIAPAA 345
Query: 176 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 235
++ G+Y+ L + + GRA F YRH G +ATIGR A+V + +
Sbjct: 346 KQMGRYVGQL---VARRIAGRAEPRA-------FNYRHYGDLATIGRKSAVVSIGR---- 391
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
L L G+++W+ W A++ ++ RNR VA +W
Sbjct: 392 --LRLKGWIAWVFWSVAHIYFLIGARNRLSVAFDW 424
>gi|326801915|ref|YP_004319734.1| NADH dehydrogenase (ubiquinone) [Sphingobacterium sp. 21]
gi|326552679|gb|ADZ81064.1| NADH dehydrogenase (ubiquinone) [Sphingobacterium sp. 21]
Length = 425
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 33/272 (12%)
Query: 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEANEI-LSSFDDRLR 71
LL+ VV GGGPTGVEF+G L++ + Y +KD+ H+ L+ + + L +
Sbjct: 153 LLNIVVAGGGPTGVEFAGMLAELGGYIAAKEYPEIKDFRSHIYLVNSGPVLLGPMSKTAQ 212
Query: 72 HYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 130
A L+K GV ++ VKD + ++IL++G + L+W+TG V + ++P
Sbjct: 213 QEAEKVLTKLGVNVILNAAVKDYLNGRVILSNGRTIETEALIWATG------VIAREVPG 266
Query: 131 SP------GGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLF 183
P G RI +D + +V ++FA+GD C + P LAQVA +QGK L
Sbjct: 267 LPSQVITRGRRIIVDAFNKVVDTANIFAIGDICYQTTDPHFPEGHPQLAQVAIQQGKLLA 326
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
L+R A G+ + F Y GSMA I +YKA+ DL + S GF
Sbjct: 327 KNLSR---AVSGQEQKS--------FHYNDKGSMAIISKYKAVADLPK------FSFKGF 369
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+W++W ++ ++ +RN+ + +W +F+
Sbjct: 370 FAWVLWLFIHIIPLIGFRNKMKLIFSWMWSFI 401
>gi|226225801|ref|YP_002759907.1| NADH dehydrogenase [Gemmatimonas aurantiaca T-27]
gi|226088992|dbj|BAH37437.1| NADH dehydrogenase [Gemmatimonas aurantiaca T-27]
Length = 476
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 128/264 (48%), Gaps = 22/264 (8%)
Query: 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDDRLRH 72
L +VGGGPTGVE +G + D R +RQ + + V LIEA ILS+F + L
Sbjct: 173 LTFAIVGGGPTGVELAGSIPDITKRALRQEFRRIDTRQTRVLLIEAGPRILSTFPEALSR 232
Query: 73 YATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 131
A L GV + G+ V +D+ + + + +P + W+ G S L + LD
Sbjct: 233 AAQQDLEGLGVEVRLGVPVTHIDNDSVTIGE-ERIPTRTVFWAAGNVASPLGRMLDADTD 291
Query: 132 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191
GR+ + VP+ +VF VGD S + G+ PA+A A + G++ + I
Sbjct: 292 RAGRVKVATDCSVPAHPNVFVVGDLSIVMRENGQPA-PAVAPTANQTGQHAARM---IVA 347
Query: 192 AGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRS 251
+ GR + PF Y H G +ATIGR+KA+ + L L+G+ +W +W
Sbjct: 348 SMNGRPRT--------PFQYWHKGDLATIGRHKAVAAFGR------LHLSGYFTWFLWLF 393
Query: 252 AYLTRVVSWRNRFYVAVNWATTFV 275
+L +V +RNR V + W +V
Sbjct: 394 VHLMYLVGFRNRASVLLQWGWAYV 417
>gi|111022305|ref|YP_705277.1| dehydrogenase [Rhodococcus jostii RHA1]
gi|110821835|gb|ABG97119.1| dehydrogenase [Rhodococcus jostii RHA1]
Length = 717
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 139/280 (49%), Gaps = 33/280 (11%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH--VKDYIHVTLIEANEILSSFD 67
E+++LL VVVG GPTGVE +G++++ R + Y + +D + L A +L F
Sbjct: 164 ERAKLLTFVVVGAGPTGVEMAGQIAELAHRTLVDVYRNFDTRDARIILLDAAPTVLPPFG 223
Query: 68 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPSTL 122
L + A L + GV + G +V DVD+ L + D + VWS GV + L
Sbjct: 224 LNLGNKAAAALEELGVEIQLGTMVTDVDADGLTVRDSDGEHHRIDAACKVWSAGVAANPL 283
Query: 123 VKSL------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
L DL ++ GR+ +++ L +P +VF VGD K LP +AQVA
Sbjct: 284 GAQLAAQSGADLDRA--GRVTVEDDLTLPGHPNVFVVGDM------MAKDRLPGVAQVAI 335
Query: 177 RQGKYLFSLL-NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 235
+ G+Y + + A R S + PF YR GSMATI R+KA+ + N E
Sbjct: 336 QGGRYAAQQIKTELTAATKDRTTSER-----APFRYRDKGSMATIARFKAVTKV-GNPE- 388
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
L G L+W++W + ++ VV +R+R ++W TF+
Sbjct: 389 ----LTGVLAWILWLAVHVVYVVGFRSRLATLISWTCTFL 424
>gi|354604988|ref|ZP_09022977.1| hypothetical protein HMPREF9450_01892 [Alistipes indistinctus YIT
12060]
gi|353347567|gb|EHB91843.1| hypothetical protein HMPREF9450_01892 [Alistipes indistinctus YIT
12060]
Length = 430
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 138/277 (49%), Gaps = 21/277 (7%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILS 64
SEEE++ LL+ V+VGGG +GVE +G L++ V + Y V +H+ L+E +++L+
Sbjct: 156 SEEERNALLNIVIVGGGASGVEIAGALAEMRSYIVPRDYPGVNISSMHIYLVEGRDKLLA 215
Query: 65 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+ L K GV ++ VKD ++I DGT + G L+W++GV +
Sbjct: 216 TMSPETSSDCLKVLEKKGVNVMLNTAVKDYQDNRVIFGDGTSILSGNLIWTSGVKSEAVE 275
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
+ K GRI D + RV ++FA+GD + + P LA+VA QG+ +
Sbjct: 276 GIGNSEKERRGRILTDRYNRVQGFDNIFAIGDIAITDDPQYPAGYPQLARVAISQGERIA 335
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
+ L + K K ME P+ YR +G +AT+GR +A E + GF
Sbjct: 336 ANLIAVSK--------GKPME---PYEYRSIGVLATVGRNRAFA------EWGKFRIKGF 378
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
++WL W ++ ++ +N+ V W + FG+D+
Sbjct: 379 MAWLAWCFVHILFLLGVQNKIKVFSGWVWNY-FGKDL 414
>gi|357383670|ref|YP_004898394.1| NADH dehydrogenase [Pelagibacterium halotolerans B2]
gi|351592307|gb|AEQ50644.1| NADH dehydrogenase [Pelagibacterium halotolerans B2]
Length = 444
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 134/263 (50%), Gaps = 21/263 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEA-NEILSSFDD 68
+ RL+ VV+GGGPTGVE +G L++ + + ++++ V L+EA + +L+++
Sbjct: 157 RKRLMTFVVIGGGPTGVETAGALAELAKATLAKDFTNIDPRDTRVVLVEAVDTLLNAYPA 216
Query: 69 RLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L Y +L+ GV + VK +D ++ D + + W GV + K L
Sbjct: 217 HLGAYTERKLADLGVEVHTNSPVKRIDENGVLAGDDF-IETSNIFWCAGVEATPAGKWLG 275
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
L + G + + L +P + VF +GD + GK LPALA VA++QG+Y+ +
Sbjct: 276 LKTNKNGTVPVSRDLTIPDLPGVFVIGDAASVEGDDGKP-LPALAPVAKQQGQYVAEAII 334
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
R A G++ PF YR G+MATIGR A+ + L + GF +W+
Sbjct: 335 R---AQQGQSPQG-------PFRYRDWGTMATIGRSAAVGKFGK------LEVKGFPAWM 378
Query: 248 VWRSAYLTRVVSWRNRFYVAVNW 270
+W + ++ +V +RNR V VNW
Sbjct: 379 LWGAVHIAYLVGFRNRINVLVNW 401
>gi|333031504|ref|ZP_08459565.1| NADH dehydrogenase (ubiquinone) [Bacteroides coprosuis DSM 18011]
gi|332742101|gb|EGJ72583.1| NADH dehydrogenase (ubiquinone) [Bacteroides coprosuis DSM 18011]
Length = 455
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 143/287 (49%), Gaps = 41/287 (14%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVT 55
L ++EE+ LL+ V+VGGG TGVE +G LS+ +R+ KDY +++
Sbjct: 151 LTCATQEERDELLNIVIVGGGATGVEIAGALSEM------KRFVFPKDYPDMSPDLLNIH 204
Query: 56 LIEANE-ILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVW 113
L+EA+ +L ++ A L K GV ++ +++ ++ L+DG+ + L+W
Sbjct: 205 LVEASSRLLGGMSEKSSANAAKYLQKMGVHIMLNTRLEEYENNTAKLSDGSSISTRSLIW 264
Query: 114 STGVGPSTLVKSLDLPK-SPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPAL 171
+GV S +K +D G RI ++E+ V +QDVF +GD C +S P L
Sbjct: 265 VSGVSASP-IKYIDGDHLGRGKRIIVNEYNAVKGLQDVFCIGDQCIQMTDSKYPNGHPQL 323
Query: 172 AQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD---PFVYRHLGSMATIGRYKALVD 228
AQVA +Q + L A + K E PF Y+ GSMAT+GR KA+ D
Sbjct: 324 AQVAIQQARNL--------------AENIKHKESNKGLTPFKYKDYGSMATVGRKKAVAD 369
Query: 229 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
L + ++ G+ +W +W +L ++ RN+ V +NW ++
Sbjct: 370 LGK------CNVGGWTAWAMWLVVHLKSILGVRNKIIVLLNWMWNYI 410
>gi|260063701|ref|YP_003196781.1| NADH dehydrogenase [Robiginitalea biformata HTCC2501]
gi|88783146|gb|EAR14319.1| putative NADH dehydrogenase [Robiginitalea biformata HTCC2501]
Length = 433
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 133/279 (47%), Gaps = 26/279 (9%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-N 60
+A S E +++ +VGGGP G+E +G L++ + + + + + + L ++ +
Sbjct: 145 IANYSGEPLEEIMNIAIVGGGPAGIELAGALAEMKKHVIPRDFPDLDTSLMSINLYQSGD 204
Query: 61 EILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L + + A L GV L+ V D ++ L+DGT P ++W+ GV
Sbjct: 205 RVLKAMSEIASEKAREYLEDLGVNVLLNSRVADYRDDQVHLSDGTRFPTDTVIWTAGVRA 264
Query: 120 STLVKSLDLPKS---PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
+ L LP+S G RI +D RV + +VFA+GD + + LP LA VA+
Sbjct: 265 APLNG---LPESCLLKGNRIAVDPCNRVAGLDNVFAIGDVAACIAEATPRGLPMLAPVAQ 321
Query: 177 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
+QG++L G PFVYR G+MAT+GR +A+ DL K
Sbjct: 322 QQGRHL-----------AGNLGRLLRRRDLVPFVYRDRGAMATVGRARAVADLPNWK--- 367
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
G +W+VW + ++ +V +RN+ +WA ++
Sbjct: 368 ---FQGTFAWVVWMAVHIYSLVGFRNKLSALYHWAFNYL 403
>gi|385274843|dbj|BAM13876.1| type II NAD(P)H dehydrogenase [Arum maculatum]
Length = 581
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 109/185 (58%), Gaps = 12/185 (6%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE- 61
L +S+EE+ + LH V+VGGGPTGVEF+ EL DF+ D+ + Y V++ + +++IEA E
Sbjct: 211 LPTLSDEERKKNLHFVIVGGGPTGVEFAAELHDFVNEDLSKLYPKVQELVKISVIEAGEH 270
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVD-SQKLILNDGTE--VPYGLLVWSTG 116
IL+ FD R+ +A + + G+ + G +VK D S ++ + E VPYG+ VWSTG
Sbjct: 271 ILTMFDKRITEFAEGKFQREGIDVKTGYKVVKVSDKSISMVSKEAGEIDVPYGMAVWSTG 330
Query: 117 VGPSTLVKSLDLPKSPGG----RIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+G ++ LD K G + DEWLRV V+A+GDC+ + + ++
Sbjct: 331 IGTRPVI--LDFMKQIGQGDRRVLATDEWLRVRGCDGVYALGDCATITQRRVMDDISSIF 388
Query: 173 QVAER 177
+VA++
Sbjct: 389 RVADK 393
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 168 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRY 223
LPA AQVA +QG YL N + + E G PF YRHLG A +G
Sbjct: 467 LPATAQVASQQGAYLARCFNLLQNIDVNPEGPIRIRESGRHRFRPFRYRHLGQFAPLGGE 526
Query: 224 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ L + S G+ S +W S Y ++ VSWR R V NW F+FGRD S +
Sbjct: 527 QTAAQLPGDWIS-----IGYGSQWLWYSVYASKQVSWRTRVAVVSNWTRRFIFGRDSSSL 581
>gi|189499609|ref|YP_001959079.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Chlorobium phaeobacteroides BS1]
gi|189495050|gb|ACE03598.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Chlorobium phaeobacteroides BS1]
Length = 428
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 141/274 (51%), Gaps = 25/274 (9%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFD 67
E+ +LL V+VGGGPTGVE +G + + + + Y H+ + + ++EA IL SF
Sbjct: 150 ERKKLLTFVIVGGGPTGVELAGSIGEMSRFTLSKFYKHIDPKLTRIFIVEAAPRILGSFS 209
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
L AT L + GV++ +V +VD + + + + ++W+ GV L + +
Sbjct: 210 PELSSKATRALEQLGVQVWTNSMVTNVDENGVQIGN-ERIEASTVLWAAGVRAIGLGRKM 268
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL-FSL 185
++ GRI ++E L +P ++F GD + + TG LP +A VA +QG+ + ++
Sbjct: 269 EVDIDRSGRIIVEEDLSIPGYPEIFVGGDQAHFAHHTGNP-LPGMAPVALQQGQSIGKNI 327
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
LN + G R PF+YR G MATIGR KA+V++ + L G ++
Sbjct: 328 LNEV--KGKQR----------KPFLYRDKGQMATIGRNKAIVEM------GNMKLFGSVA 369
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWA-TTFVFGR 278
W W ++ + ++++R +V + W + F FG
Sbjct: 370 WFTWLLVHIYYLATFKHRVFVLMQWGWSYFTFGH 403
>gi|323343718|ref|ZP_08083945.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella oralis
ATCC 33269]
gi|323095537|gb|EFZ38111.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella oralis
ATCC 33269]
Length = 426
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 138/278 (49%), Gaps = 23/278 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD--YIHVTLIEAN 60
++ +E+ +LL+ V+VGGGP+GVE +G LS+ + R V R H D +++ L+ A+
Sbjct: 151 ISTTDNDERQQLLNIVIVGGGPSGVEIAGALSE-MKRMVLPREYHDLDAGLMNIYLVNAD 209
Query: 61 EI-LSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVG 118
++ L S A L V+L+ G V D ++L DG +P ++W +GV
Sbjct: 210 DVLLKSMSPESSASAERYLRNMEVKLILGKRVVDYKDNLVVLEDGNSIPAETVIWVSGVR 269
Query: 119 PSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAER 177
+ + GGR+ +D + RV + DVF++GD C + P LAQVA +
Sbjct: 270 ATQIGGIDKACIGRGGRLKVDAFNRVEGLNDVFSIGDQCIMTADPNYPDGHPQLAQVAIQ 329
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
Q + L + +A D PF YR+LG+MAT+GR KA+ ++ G
Sbjct: 330 QARNLAAN-----------LKAAADGHSMAPFRYRNLGTMATVGRNKAVAEI------AG 372
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
G +WL+W +L ++ RN+ V +NW ++
Sbjct: 373 CKFKGLFAWLLWLVVHLRSILGVRNKVVVLLNWIWNYI 410
>gi|302308866|ref|NP_985994.2| AFR447Cp [Ashbya gossypii ATCC 10895]
gi|299790833|gb|AAS53818.2| AFR447Cp [Ashbya gossypii ATCC 10895]
gi|374109223|gb|AEY98129.1| FAFR447Cp [Ashbya gossypii FDAG1]
Length = 519
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 152/295 (51%), Gaps = 31/295 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E+ RLL VVVGGGPTGVE +GE D++ +D+++ + + + + L+EA +L+ F
Sbjct: 228 DPERKRLLTIVVVGGGPTGVETAGEFQDYVDQDLKRFMPSIAEEVQIHLVEALPNVLNMF 287
Query: 67 DDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLIL----NDGT----EVPYGLLVWSTGV 117
+ +L YA L K+ ++L+ R V V+ LI DGT +PYG L+W+TG
Sbjct: 288 EKKLTSYAQDVLQKTNIKLMLRTAVGKVEKDHLIAKTKKEDGTVVEQTIPYGTLIWATGN 347
Query: 118 GPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
+V L +P+ + +D ++ V +VFAVGD + L AQ
Sbjct: 348 KARPIVCDLFKKIPEQNSSTRGLAVDNYMLVKGTNNVFAVGDNAF-------AGLAPTAQ 400
Query: 174 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD---------PFVYRHLGSMATIGRYK 224
VA ++ +YL + +++ K + E D PF Y HLG++A +G +
Sbjct: 401 VAHQEAEYLAKVFDKMAKIPDFHEQLTQRKEKVDLLFEEHGFKPFKYVHLGALAYLGAER 460
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
A+ D+ K+S + G +++ +WR YL+ ++S R+RF V +W F RD
Sbjct: 461 AIADITYGKKS-FYTGGGLITFYIWRVTYLSMLLSARSRFKVIADWLKLTFFKRD 514
>gi|229493549|ref|ZP_04387334.1| NADH dehydrogenase [Rhodococcus erythropolis SK121]
gi|453070525|ref|ZP_21973766.1| NADH dehydrogenase [Rhodococcus qingshengii BKS 20-40]
gi|229319510|gb|EEN85346.1| NADH dehydrogenase [Rhodococcus erythropolis SK121]
gi|452761039|gb|EME19356.1| NADH dehydrogenase [Rhodococcus qingshengii BKS 20-40]
Length = 471
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 146/281 (51%), Gaps = 34/281 (12%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSFD 67
E++RLL VVVG GPTGVE +G++++ R + + + ++ V L A +L +
Sbjct: 162 ERARLLTFVVVGAGPTGVELAGQIAELSRRTLDGAFRKIDPREARVVLLDGAPAVLPVYG 221
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN--DGT--EVPYGLLVWSTGVGPSTL 122
+L A L K GV + + +V DVD+ LI+ DGT + VWS GV S L
Sbjct: 222 GKLSRKAAETLEKLGVEIQLDAMVTDVDNDGLIIKEKDGTLRRIESQCKVWSAGVQASPL 281
Query: 123 VKSLDLPKSPG-----GRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
K L +S G GR+ ++ L +P +VF +GD + S K LP LAQVA +
Sbjct: 282 GKQL-AEQSGGETDRAGRVMVNPDLSLPGHPNVFVIGD----MMSLDK--LPGLAQVAMQ 334
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
GKY +I + G++ S + PF Y GSMATI R+ A+ + +
Sbjct: 335 GGKYA---AKQIKASLDGKSPSERV-----PFKYFDKGSMATISRFSAVAKVGK------ 380
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
L ++GF+ W+ W + +L +V +R+R ++WA TF FGR
Sbjct: 381 LEISGFIGWVAWLAIHLLYLVGFRSRASTLLSWAVTF-FGR 420
>gi|383828659|ref|ZP_09983748.1| NADH dehydrogenase, FAD-containing subunit [Saccharomonospora
xinjiangensis XJ-54]
gi|383461312|gb|EID53402.1| NADH dehydrogenase, FAD-containing subunit [Saccharomonospora
xinjiangensis XJ-54]
Length = 431
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 137/283 (48%), Gaps = 26/283 (9%)
Query: 4 AGISEEEKSRL-LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-N 60
A ++EE R L V VGGG TGVE EL D + DV + Y V + + L+EA +
Sbjct: 149 AATTDEELRRCALTFVFVGGGYTGVEAIAELQDMAI-DVLEGYPEVDRSEMRWILVEAMD 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
IL + D L ATT+L+ G+ + G +++ +++ L L+DGT++ LVW G P
Sbjct: 208 RILGTVDADLAELATTELTARGIDIRTGTLLESAENRVLRLSDGTKLSSDTLVWVAGTRP 267
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
T+V L LP GR+ +D+ +RV ++++ GDC+ + P AQ A RQ
Sbjct: 268 QTIVGELGLPVDERGRLVVDDTMRVNGHANIWSAGDCAAVPDPEKGGTCPPTAQHAVRQA 327
Query: 180 KYLFS--LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
+ L LL G+A PF Y G T+G+ KA+ + G
Sbjct: 328 QQLGENLLLTLRGQA-------------VKPFRYNSRGEFVTLGKNKAV------GQVLG 368
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
+ G L+W + R+ Y T++ +W V +W FG D+
Sbjct: 369 HKVNGSLAWTLRRAYYATQIPTWNRTVRVLGDWVVGMPFGHDV 411
>gi|284044300|ref|YP_003394640.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Conexibacter woesei DSM 14684]
gi|283948521|gb|ADB51265.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Conexibacter woesei DSM 14684]
Length = 451
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 134/280 (47%), Gaps = 23/280 (8%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSF 66
E+++ L V VG G G+E EL DF+ DV Y + + L+EA + ++
Sbjct: 155 EQRAEFLTFVFVGAGYAGLEGIAELQDFVT-DVIDLYPRCRVQGVRFMLVEARDRVMPEV 213
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
RL +A +L G+ + V+ +D + + L G VP + W+ GV P +V
Sbjct: 214 APRLADFAQRELRGRGIEIRTNTTVEALDERSVTLKGGEVVPARTVAWTAGVKPHPVVAR 273
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVL-PALAQVAERQGKYLF- 183
L LP GGRI +D+ +RV DV+A+GD + + K L P AQ A RQG+ +
Sbjct: 274 LGLPLERGGRIEVDQTMRVRGHDDVWAIGDAAAIPDPARKGELSPPTAQHAIRQGRRVAR 333
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
++ +G GGR PF Y+ G +GR++A+ + G+ GF
Sbjct: 334 NVAAELG--AGGRVR---------PFTYKTKGVFVDMGRHQAVAS------TMGIRWRGF 376
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W + R+ +L + W + + V+W + +F RD S +
Sbjct: 377 PAWFLARTYHLANMPGWHRKSRLVVDWTVSLLFPRDTSEL 416
>gi|226185715|dbj|BAH33819.1| probable NADH dehydrogenase [Rhodococcus erythropolis PR4]
Length = 471
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 146/281 (51%), Gaps = 34/281 (12%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSFD 67
E++RLL VVVG GPTGVE +G++++ R + + + ++ V L A +L +
Sbjct: 162 ERARLLTFVVVGAGPTGVELAGQIAELSRRTLDGAFRKIDPREARVVLLDGAPAVLPVYG 221
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLIL--NDGT--EVPYGLLVWSTGVGPSTL 122
+L A L K GV + + +V DVD+ LI+ DGT + VWS GV S L
Sbjct: 222 GKLSRKAAETLEKLGVEIQLDAMVTDVDNDGLIIREKDGTLRRIESQCKVWSAGVQASPL 281
Query: 123 VKSLDLPKSPG-----GRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
K L +S G GR+ ++ L +P +VF +GD + S K LP LAQVA +
Sbjct: 282 GKQL-AEQSGGETDRAGRVMVNPDLSLPGHPNVFVIGD----MMSLDK--LPGLAQVAMQ 334
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
GKY +I + G++ S + PF Y GSMATI R+ A+ + +
Sbjct: 335 GGKYA---AKQIKASLDGKSPSERV-----PFKYFDKGSMATISRFSAVAKVGK------ 380
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
L ++GF+ W+ W + +L +V +R+R ++WA TF FGR
Sbjct: 381 LEISGFIGWVAWLAIHLLYLVGFRSRASTLLSWAVTF-FGR 420
>gi|358399073|gb|EHK48416.1| hypothetical protein TRIATDRAFT_54190 [Trichoderma atroviride IMI
206040]
Length = 416
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 142/294 (48%), Gaps = 45/294 (15%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L G SE+ + +LLH +VGGGPTG+E + EL+D D + H+K V++ + A +
Sbjct: 153 LPGTSEDRQRQLLHVAIVGGGPTGIEMAAELTDLFDGDANVLFPHLKGKASVSVYDVAPQ 212
Query: 62 ILSSFDDRLRHYATTQLS------KSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWST 115
IL+ FD +L YA++ L K+ +++ +++Q+ DG YG+L+W+T
Sbjct: 213 ILAPFDQKLAEYASSALKTGRVNIKTNTHILKITQNTIETQE----DGA-TGYGMLIWAT 267
Query: 116 GVGPSTLVKSLDLPKSPGG--RIGIDEWLRV-----PSVQDVFAVGDCSGYLESTGKTVL 168
G LV L+L K+ G RI D+ L +++ VFA+GD +G +E L
Sbjct: 268 GNKSVPLVDKLNLRKTEKGLVRILTDDRLNAFALDGNALRSVFAMGD-AGDIEG---GTL 323
Query: 169 PALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVD 228
P A+VA ++ Y+ +LN+ + PF Y+ + GR +V
Sbjct: 324 PTTAEVAIQKADYIIKVLNKNDTS---------------PFEYKQRSLVTYTGRRDGVVQ 368
Query: 229 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
++ G+ +WL WRS SWR + + W ++ GR+I R
Sbjct: 369 GKR-------EYTGYGAWLSWRSGNFFWTRSWRRKILMCYAWFMDWLDGREIIR 415
>gi|363748444|ref|XP_003644440.1| hypothetical protein Ecym_1393 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888072|gb|AET37623.1| hypothetical protein Ecym_1393 [Eremothecium cymbalariae
DBVPG#7215]
Length = 530
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 152/295 (51%), Gaps = 31/295 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E+ RLL VVVGGGPTGVE +GE D++ +D+++ + + + + L+EA +L+ F
Sbjct: 239 DPERKRLLTIVVVGGGPTGVETAGEFQDYVDQDLKRFMPSIAEEVQIHLVEALPNVLNMF 298
Query: 67 DDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLI----LNDG----TEVPYGLLVWSTGV 117
+ +L YA L ++ + L+ + V V+ LI + +G T++PYG L+W+TG
Sbjct: 299 ERKLTSYAQDVLERTKINLMLKTAVGKVEQDHLIAKTKMENGEVVETKIPYGTLIWATGN 358
Query: 118 GP----STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
S L K + S + ++ ++ V ++FAVGD L AQ
Sbjct: 359 KARPIISNLFKKIPEQNSCTKGLAVNGYMLVKGTNNIFAVGD-------NAFAGLAPTAQ 411
Query: 174 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD---------PFVYRHLGSMATIGRYK 224
VA ++ +YL + +++ K G A +K E D PF Y HLG++A +G +
Sbjct: 412 VAHQEAEYLVKIFDKMSKISGFHAQLSKRTEKVDLLFEENGLKPFKYIHLGALAYLGADR 471
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
A+ D+ K S + G L++ +WR YL ++S R+RF V +W F RD
Sbjct: 472 AIADITYGKRS-FYTGGGLLTFYIWRVTYLGMLLSARSRFKVIADWLKLAFFKRD 525
>gi|429742126|ref|ZP_19275773.1| pyridine nucleotide-disulfide oxidoreductase [Porphyromonas
catoniae F0037]
gi|429157767|gb|EKY00348.1| pyridine nucleotide-disulfide oxidoreductase [Porphyromonas
catoniae F0037]
Length = 442
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 140/278 (50%), Gaps = 33/278 (11%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH-------VTLIEAN 60
EE ++ LL +VGGGP+GVE +G L++ +RY KDY + + L++A+
Sbjct: 156 EERRNALLTVAIVGGGPSGVEIAGALAEM------KRYVLPKDYPYLDSSLFRIHLLDAS 209
Query: 61 -EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVG 118
+L + +R A L + GV + G +V D D + L L+DG+E+ ++W +G+
Sbjct: 210 PRLLQAMSERSSETAARGLREMGVEIHTGTMVSDYDGKTLRLSDGSEMKTRTVIWVSGIV 269
Query: 119 PSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAER 177
+ + G RI +DE V + +VFA+GD C ++ P LAQVA +
Sbjct: 270 ANAVEGIQAEALGRGRRILVDEHNEVKGLTNVFAIGDQCLMTADANYPNGHPQLAQVAIQ 329
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
Q + L L + ++ + PF Y+ LGSMATIGR +A+ ++ G
Sbjct: 330 QARLLARNLR-----------ARQEGKPLSPFHYKDLGSMATIGRNRAVAEI------GG 372
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
GF +W++W +L ++S RN+ V +NW +V
Sbjct: 373 AKWGGFTAWMLWLVVHLRSILSVRNKVIVLLNWIWNYV 410
>gi|224003739|ref|XP_002291541.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973317|gb|EED91648.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 598
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 163/332 (49%), Gaps = 55/332 (16%)
Query: 3 LAGISE-EEKSRLLHCVVVGGGPTGVEFSGELSDF---IMRDVRQRYSHVKDYIHVTLIE 58
+AG+ EE+++ ++VGGGPTGVE +GEL D I R + Y +K + V L+
Sbjct: 271 VAGVDHVEERTKRATFLIVGGGPTGVELAGELYDLGEDITRPHKGTYPRLKGNVRVILVH 330
Query: 59 A-NEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVD------SQKLILNDGTEV---- 106
+ +E++ F+ LR A L K GV+++ V ++ S K + + G E+
Sbjct: 331 SGSELVPQFEKPLRAEALKSLEKKGVQVILNTRVTEIGNGFATLSTKTVDDTGYEIGREE 390
Query: 107 ---PYGLLVWSTGVGPSTLVKSL--DLP---KSPGGRIGIDEWLRVPSVQD------VFA 152
P GL VW G P + V L LP KS GRI +D WLR P ++D V
Sbjct: 391 STLPLGLSVWCAGTAPVSFVSQLLDQLPTEAKSKDGRIQVDRWLR-PPMKDPSLLGSVLV 449
Query: 153 VGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR------IGKAGGGRANSAKD---- 202
+GD + +E LP AQVA +QG Y+ +L+R A +S D
Sbjct: 450 IGDAAAAIED--DEYLPQTAQVAGQQGAYIARMLSRGYDLEVTPPALPCTPSSDCDVFYD 507
Query: 203 -----------MELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRS 251
+++ F + +LG +A +G +AL + Q + + +G +++++WRS
Sbjct: 508 PQLTEWLKIRGLDIASKFSFLNLGLLAYLGGGEALSQV-QVGDFPLFAYSGSVAFVLWRS 566
Query: 252 AYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
YL + V+ +NR V +W + +FGRD++R
Sbjct: 567 VYLVKQVATKNRVLVTFDWLKSALFGRDMTRF 598
>gi|374585676|ref|ZP_09658768.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Leptonema illini DSM 21528]
gi|373874537|gb|EHQ06531.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Leptonema illini DSM 21528]
Length = 465
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 136/278 (48%), Gaps = 21/278 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSF 66
+ + L +VVGGGPTGVE +G L + + + ++ + LIEA IL +F
Sbjct: 155 DRQKEYLTFIVVGGGPTGVELAGALGEISRYTLESNFRNINPKRTRIILIEAGPRILPAF 214
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
D L +A +L + GV + V +V S +I G + ++W+ GV + + ++
Sbjct: 215 DADLSEHAARELERLGVTIWTNTSVTEVRSDGVIAG-GENIRARTILWAAGVLGNGMNRT 273
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
L + R+ ++ + +P DVF VGD + + + LP LA VA +QGK++
Sbjct: 274 LGVELDRQSRVIVEADMSIPGSPDVFVVGDQASFSHTADGKALPGLAPVAIQQGKHVAK- 332
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
N I + G PFVY G MATIGR A+V +S + L GFL+
Sbjct: 333 -NIIAEVKGKERK---------PFVYFDKGIMATIGRTDAVV------QSGSMRLTGFLA 376
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
WL+W ++ ++S+RNR V W ++ R +R+
Sbjct: 377 WLMWIVVHIAYLISFRNRVMVLFQWGWSYFNFRRGARL 414
>gi|367000655|ref|XP_003685063.1| hypothetical protein TPHA_0C04800 [Tetrapisispora phaffii CBS 4417]
gi|357523360|emb|CCE62629.1| hypothetical protein TPHA_0C04800 [Tetrapisispora phaffii CBS 4417]
Length = 530
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 157/299 (52%), Gaps = 37/299 (12%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E+ RLL VVVGGGPTGVE +GEL D++ +D+++ + + + + L+EA +L+ F
Sbjct: 239 DPERKRLLSIVVVGGGPTGVETAGELQDYVSQDLKKFLPSLAEEVQIHLVEALPVVLNMF 298
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGT----EVPYGLLVWSTGV 117
+ +L YA + L K+ ++L ++ V V+ LI DGT ++ YG L+W+TG
Sbjct: 299 EKKLSSYAQSVLEKTTIKLHLKTAVGKVEKDHLIAKTKKPDGTVEEQKIGYGTLIWATGN 358
Query: 118 GPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGD---CSGYLESTGKTVLPA 170
+V L +P+ + ++++L+V +++FA+GD C LP
Sbjct: 359 KARPVVTDLFTKIPEQNQSTRALNVNQFLQVKGSKNIFAIGDNAFCG----------LPP 408
Query: 171 LAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD---------PFVYRHLGSMATIG 221
AQVA +Q +YL +++ K G K E D PF Y HLG++A +G
Sbjct: 409 TAQVAHQQAEYLCKNFDKMEKIDGFHNTLLKKTEKFDLPFEENGFKPFNYIHLGALAYLG 468
Query: 222 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
+A+ ++ K S + G +++ VWR YL+ ++S R+RF V +W F RD
Sbjct: 469 SERAIANITYGKRS-FYTGGGLITFYVWRILYLSMILSARSRFKVISDWLKLTFFKRDF 526
>gi|374597642|ref|ZP_09670644.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Myroides odoratus DSM 2801]
gi|423324027|ref|ZP_17301869.1| hypothetical protein HMPREF9716_01226 [Myroides odoratimimus CIP
103059]
gi|373909112|gb|EHQ40961.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Myroides odoratus DSM 2801]
gi|404608976|gb|EKB08407.1| hypothetical protein HMPREF9716_01226 [Myroides odoratimimus CIP
103059]
Length = 434
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 134/280 (47%), Gaps = 38/280 (13%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-------IHVTLIE-A 59
E+EK L++ V+VG GPTGVE +G L++ +++ KDY + + +I+
Sbjct: 155 EKEKRALMNFVIVGAGPTGVELAGALAEM------KKHVLPKDYPDLDIRQMEINVIQGG 208
Query: 60 NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVG 118
+++L + ++ A L K GV + V IV + D + + G E ++W+ GV
Sbjct: 209 SKVLDAMSEKSSRRAQEFLEKLGVNVWVNEIVTNFDGKTVQTKSGLEFQTETVIWTAGVM 268
Query: 119 PSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 178
+ + G R+ ++E+ +V D+FA+GD + + P +AQ A +Q
Sbjct: 269 GAVIDGFEASVIQRGNRLKVNEYNQVEGFTDIFAIGDVAAMVTENLPMGHPMMAQPAIQQ 328
Query: 179 GKYLFSLLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKES 235
G+ L A + + G P F Y GSMATIGR KA+VDL +
Sbjct: 329 GQLL--------------ATNLIQLREGKPLKKFTYNDKGSMATIGRNKAVVDLPK---- 370
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+GF +W VW +L ++ +RN+F V NW ++
Sbjct: 371 --FHFSGFFAWFVWMFVHLMSLIGFRNKFLVFWNWVYNYL 408
>gi|358056814|dbj|GAA97164.1| hypothetical protein E5Q_03840 [Mixia osmundae IAM 14324]
Length = 924
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 158/306 (51%), Gaps = 38/306 (12%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEIL 63
G S EE RLLH VVVGGGPTGVE +GEL DF+ D+ Y + + +TL+EA +L
Sbjct: 362 GQSNEEIDRLLHMVVVGGGPTGVELAGELHDFLAEDLANWYPEIAGRVRITLVEALPNVL 421
Query: 64 SSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT-----EVPYGLLVWSTGV 117
F +L Y T+ ++ + L R +VK+V K+I+ G E+PYG+LVW+TG
Sbjct: 422 PMFSKQLIEYTTSTFKENKIDVLTRTMVKEV-QDKVIVAQGEDKKLHEIPYGMLVWATGN 480
Query: 118 G--PST--LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
P T L+ S+ ++ + +++ L + +D++A+GD T AQ
Sbjct: 481 TSRPVTRKLMASIGEAQANKRGLQVNDRLELAGAKDIWALGD-------ATATAYAPTAQ 533
Query: 174 VAERQGKYLFSLLNRIGKA-------GGGRANSAKDME----------LGDPFVYRHLGS 216
A +QG+YL +++ K RA+ +D E F Y H GS
Sbjct: 534 AASQQGQYLARCFSQMYKKEKLEAALDSARAHKDQDTEGIMKQLRRVTNVKSFSYSHQGS 593
Query: 217 MATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 276
+A IG KA+ DL + ++ G + L WRSAY++ + S RNR V ++WA +F
Sbjct: 594 LAYIGSDKAIADL--PFLNGNVATGGVATMLFWRSAYVSTLFSLRNRALVVLDWAKVKIF 651
Query: 277 GRDISR 282
RDISR
Sbjct: 652 RRDISR 657
>gi|288923057|ref|ZP_06417210.1| NADH dehydrogenase (ubiquinone) [Frankia sp. EUN1f]
gi|288345607|gb|EFC79983.1| NADH dehydrogenase (ubiquinone) [Frankia sp. EUN1f]
Length = 503
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 138/281 (49%), Gaps = 35/281 (12%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLI---EANEIL 63
+ E+ +R + VVVG GPTGVE +G++++ R +R + + D +I A +L
Sbjct: 164 NPEDVARYMTFVVVGAGPTGVEMAGQIAEMAHRTLRHDFRRI-DTTKARIILLDAAPTVL 222
Query: 64 SSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGT----EVPYGLLVWSTGVG 118
+F ++L AT +L K GV + G V +VDS+ + + D + +W+ GV
Sbjct: 223 GTFGEKLAAKATAKLEKIGVEIQLGARVINVDSRGIDVEDSDGNRRRIESVCKIWAAGVA 282
Query: 119 PSTLVKSLDLPKSP----GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
S L K L GRI + L +P +VF VGD + LP +AQV
Sbjct: 283 ASPLGKQLAEQSGAVLDRAGRIQVQPDLTLPGHPEVFVVGDMAALDR------LPGVAQV 336
Query: 175 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 234
A + G+Y + ++G N F Y+ GSMATI R+ A+ +
Sbjct: 337 AIQGGQYAAKTIATRLRSGPPMRN----------FEYKDKGSMATISRFSAVASI----- 381
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
KG+ L+GFL+WL+W + +L ++ +++R ++W +F+
Sbjct: 382 -KGVQLSGFLAWLMWLAVHLVYIIGFKHRVTTLLHWTVSFI 421
>gi|386850499|ref|YP_006268512.1| NADH dehydrogenase [Actinoplanes sp. SE50/110]
gi|359838003|gb|AEV86444.1| NADH dehydrogenase [Actinoplanes sp. SE50/110]
Length = 463
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 139/281 (49%), Gaps = 35/281 (12%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEA-NEILSSF 66
EE R L VVVG GPTG E +G++++ R + +Y H+ + L++A +L++F
Sbjct: 158 EEIQRWLTFVVVGAGPTGTELAGQIAELAHRTLPGQYKHIDPRQARIILVDAIGAVLNTF 217
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGT---EVPYGLLVWSTGVGPSTL 122
D L A QL+K GV + + V VDS + + D +P VW+ GV L
Sbjct: 218 GDHLSAGAQRQLAKLGVEVKLNTKVVGVDSTGIDVEDPQGRHRIPSITKVWAAGVAAPPL 277
Query: 123 VKSLDLPKSPG------GRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
+ L +S G GR+ + VP ++F +GD + GK LP +AQVA
Sbjct: 278 ARQ--LAESTGAKTDRAGRMFVAPDTSVPGHPEIFVLGDMMNLAGADGKP-LPGVAQVAI 334
Query: 177 RQGKYLFSLLNR--IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 234
+ G++ + R GK E G PF Y GS+ATI R+ A+ + +
Sbjct: 335 QSGRHAADQIKRRLAGK------------ETGQPFKYFDKGSLATISRFSAVASIGK--- 379
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+ L+GF +W+VW + +L +V ++NR ++WA +F+
Sbjct: 380 ---VRLSGFPAWVVWVAVHLFYLVGFKNRVTAVLHWAVSFI 417
>gi|390956728|ref|YP_006420485.1| NADH dehydrogenase, FAD-containing subunit [Terriglobus roseus DSM
18391]
gi|390411646|gb|AFL87150.1| NADH dehydrogenase, FAD-containing subunit [Terriglobus roseus DSM
18391]
Length = 450
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 142/281 (50%), Gaps = 18/281 (6%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANE-IL 63
+ E + L+ VV+GGGPTGVE +G +SD +R+ + H+ V ++E + IL
Sbjct: 154 MQETGRHPALNFVVIGGGPTGVELAGAISDIAKLYIRRDFKHIDPATARVLIVEGSPTIL 213
Query: 64 SSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
++ + L+ A QL++ V++ V DV ++++ + + +W+ GV S L
Sbjct: 214 GAYPEDLQQSALKQLAELDVQVRTNTRVTDVQPGYVVVDGHERIDSVVTLWAAGVQASPL 273
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYL 182
K L + G + +DE L ++F GD + + S GK V P +AQ A + G Y
Sbjct: 274 GKLLGVEVDKRGAVLVDEQLHPVGHPEIFVCGDLA-HAMSEGKPV-PGVAQPAMQMGDY- 330
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
AG A K ++ PF Y G MATIGR A+ +++ KG L+G
Sbjct: 331 ---------AGKTIALEVKGEKMKKPFHYHDKGDMATIGRSAAVANVKW--PFKG-HLSG 378
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
F +W+ W ++ ++ +RNR V NWA T++F D SR+
Sbjct: 379 FPAWISWLVVHIFFLIGFRNRLSVFRNWAWTYLFFTDGSRL 419
>gi|378764042|ref|YP_005192658.1| putative NADH dehydrogenase [Sinorhizobium fredii HH103]
gi|365183670|emb|CCF00519.1| putative NADH dehydrogenase [Sinorhizobium fredii HH103]
Length = 435
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 142/278 (51%), Gaps = 21/278 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEANE-ILSSF 66
+ + RLL VVVGGGPTGVE +G + + + + + + + V LIEA E IL +
Sbjct: 169 QSRKRLLTFVVVGGGPTGVELAGAIVELARKAIVRDFRRIDASSARVVLIEAGERILPTM 228
Query: 67 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
L A QL G +V G V + D + L DGTE+ ++W+ GV S K
Sbjct: 229 PPALSARACEQLEGLGAEIVLGKAVAECDGSGVRLADGTEIGSACVLWAAGVMASRAAKW 288
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
+ P GR+ +DE L P +VF +GD + +++ G+ V P +A A++ G+Y
Sbjct: 289 IGAPADRAGRVKVDECLNPPGHDEVFVIGDTALAIDAAGRPV-PGVAPAAKQMGRYAARA 347
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
+ + G RA PF YR G++ATIGR A+ DL + L+G+ +
Sbjct: 348 I--LDHMAGRRAA---------PFRYRDFGNLATIGRKAAVADLGKA------WLSGYAA 390
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
WLVW A+L +V +RNR V ++WA +V +R+
Sbjct: 391 WLVWNFAHLWFLVGFRNRLVVFLDWALAYVRNDRAARL 428
>gi|414173433|ref|ZP_11428196.1| hypothetical protein HMPREF9695_01842 [Afipia broomeae ATCC 49717]
gi|410892085|gb|EKS39881.1| hypothetical protein HMPREF9695_01842 [Afipia broomeae ATCC 49717]
Length = 429
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 143/276 (51%), Gaps = 19/276 (6%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFD 67
E+++ L V++G GPTGVE +G +++ +R + + V LIEA ILSSF
Sbjct: 160 ERAKFLTFVIIGAGPTGVELAGTIAELARDTLRDEFRNFDTRSARVVLIEAGPRILSSFS 219
Query: 68 DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
+ L YA L++ GV + G + + G +P ++W+ GV S + L
Sbjct: 220 EDLSDYAQRALTRLGVEVKLGHAVSKCGEGGVELGGEFLPAKTIIWAAGVAASPAAEWLH 279
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ ++ L P D+F +GD + ++ES ++P +A A+++G+Y +
Sbjct: 280 VPADRAGRVLVEPDLTAPGHPDIFVIGDAA-HVESADGKLVPGVAPAAKQEGQY---VAR 335
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
RI + GR G+ F Y++ G++ATIG+ A+VD + L G L+W
Sbjct: 336 RIMERLRGR-------NPGERFAYKNAGNLATIGKRAAIVDF------GWIKLKGRLAWW 382
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W A++ ++ RNR VA+NW ++ G+ +R+
Sbjct: 383 MWGVAHIFFLIGLRNRLAVAMNWLWIYISGQRSARL 418
>gi|217974378|ref|YP_002359129.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Shewanella baltica OS223]
gi|217499513|gb|ACK47706.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Shewanella baltica OS223]
Length = 429
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 129/246 (52%), Gaps = 18/246 (7%)
Query: 19 VVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDRLRHYATT 76
+VG G TGVE + EL I Y ++ K ++ V LIEA+ +IL +R+ A
Sbjct: 170 IVGAGATGVELAAELHHVIESVKEYGYLNIAKHHLDVHLIEASPKILPQLPERVSARAQA 229
Query: 77 QLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGV-GPSTLVKSLDLPKSPGG 134
L K G+RL G+ VK+V I DG + GL VW+ GV GP LP +P
Sbjct: 230 VLDKIGIRLHIGVQVKEVTRDGFITQDGDVIKAGLKVWAAGVKGPKAFQNFTKLPITPRN 289
Query: 135 RIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF-SLLNRIGKAG 193
++ +D+ +RV QD++AVGDC+ ++S+G+ V P AQ A + LF +++NR+
Sbjct: 290 QVEVDDCMRVKGHQDIYAVGDCALLIQSSGQPV-PPRAQAAAQMADTLFDNIVNRL---- 344
Query: 194 GGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAY 253
G+ A F+Y+ GS+ ++ R+ A+ +L N S + G ++ L++ S Y
Sbjct: 345 QGKPEKA--------FIYKDYGSLVSLSRFSAVGNLMGNLRSGTFFVEGHIARLMYISLY 396
Query: 254 LTRVVS 259
+ S
Sbjct: 397 QRHLAS 402
>gi|343087190|ref|YP_004776485.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Cyclobacterium marinum DSM 745]
gi|342355724|gb|AEL28254.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Cyclobacterium marinum DSM 745]
Length = 442
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 139/275 (50%), Gaps = 37/275 (13%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY-SHVKDYIHVTLIEA-NEILSS 65
E EK L + ++VGGGP GVE +G L++F + Y + + + + L+EA +++L+S
Sbjct: 164 EHEKDILTNFIIVGGGPAGVEMAGALAEFKKYILPGDYPEYSSEIMDIYLLEAGDQLLAS 223
Query: 66 FDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV------- 117
D+ A L++ GV+ ++ V+ D + N G ++ L+W+ GV
Sbjct: 224 MSDKASEKALKYLTRLGVQVMLEEAVEHYDGSAVSTNSGKKLYARNLIWTAGVTGDFPEG 283
Query: 118 -GPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
G ++V+ G R+ ++ L V ++FA+GD + + P +AQVA
Sbjct: 284 IGEESIVR--------GNRLQVNNTLLVKGYTNIFAIGDIAAVVSQRTPKGHPQVAQVAI 335
Query: 177 RQGKYLFSLLN-RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 235
+QGKYL ++ RI GR E PF Y GS+AT+G+ +A+ DL +
Sbjct: 336 QQGKYLGEVIKYRI----AGR-------EYSKPFRYLDKGSLATVGKRRAVADLGK---- 380
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
G+++WL+W +L + +RN+ VA+NW
Sbjct: 381 --FRFGGYIAWLLWSVVHLFSISGFRNKLMVALNW 413
>gi|193213153|ref|YP_001999106.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Chlorobaculum parvum NCIB 8327]
gi|193086630|gb|ACF11906.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Chlorobaculum parvum NCIB 8327]
Length = 430
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 140/274 (51%), Gaps = 25/274 (9%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANE-ILSSF 66
+E+ + L V+VGGGPTGVE +G + + + + Y ++ + + ++EA E IL +F
Sbjct: 150 KERKKQLTFVIVGGGPTGVELAGSIGEMSRYTLSKFYRNIDPKLTRIFIVEAAERILGTF 209
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE-VPYGLLVWSTGVGPSTLVK 124
L AT +L K GV++ +V DVD+ + + G E + ++W+ GV S +
Sbjct: 210 SHELSSKATRELEKLGVQVWTSSMVSDVDADGVQI--GRERIEAATVLWAAGVKASEIGP 267
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
++ + GRI I+ L +P +VF GD + + G T LP +A VA +QG +
Sbjct: 268 NMGVETDRSGRIKIENDLSLPGHPEVFVGGDQACFTLEDGST-LPGMAPVAMQQGNAIGR 326
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
++ R G R PF YR G MATIGR KA+V++ L G L
Sbjct: 327 MI-RDDLKGKPRK----------PFKYRDKGQMATIGRNKAIVEI------GNLKFDGAL 369
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWA-TTFVFG 277
+W W ++ + ++R+R +V + WA + F FG
Sbjct: 370 AWFTWLLVHIYYLSTFRHRVFVLMQWAWSYFTFG 403
>gi|298293540|ref|YP_003695479.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Starkeya novella DSM 506]
gi|296930051|gb|ADH90860.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Starkeya novella DSM 506]
Length = 436
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 21/279 (7%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANE-ILSS 65
E + RLL V++GGGPTGVE +G +++ + + V + LIEA +L
Sbjct: 155 EAARRRLLTFVIIGGGPTGVEMAGSIAEIARHALAPDFKRVDPRTARILLIEAGPRLLPV 214
Query: 66 FDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
+ L YA +L GV ++ G V D+ + + L G +P +W+ GV S +
Sbjct: 215 LTEPLSAYARRRLEAMGVEVLTGRPVVDIGADHVELAGGEIIPASTKIWAAGVRASPAAQ 274
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
L + GR + L VP ++F +GD + + GK V P +A A++ G ++
Sbjct: 275 WLGVETDRAGRCLVGPDLSVPDAPEIFVIGDTAAVSDPAGKPV-PGIAPAAKQMGDHVAK 333
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
+ + G A + F YRH G +ATIGR A+V L + L L GFL
Sbjct: 334 AIE--ARLAGSTAPA---------FRYRHDGDLATIGRNSAVVKLGR------LELTGFL 376
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W+ W ++ ++ RNR VA+ W +V + +R+
Sbjct: 377 GWMFWGFIHVYFLIGTRNRIAVALAWLWNYVTHQRAARL 415
>gi|429749408|ref|ZP_19282533.1| pyridine nucleotide-disulfide oxidoreductase [Capnocytophaga sp.
oral taxon 332 str. F0381]
gi|429168295|gb|EKY10138.1| pyridine nucleotide-disulfide oxidoreductase [Capnocytophaga sp.
oral taxon 332 str. F0381]
Length = 424
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 134/275 (48%), Gaps = 26/275 (9%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK--DYIHVTLIEANE-ILS 64
+E + +LL + G GPTGVE SG ++ +++ Y + D + LI+ + +L+
Sbjct: 151 KEVRRKLLSFAIAGAGPTGVELSGIFAEMKQNIMKKDYPELSQSDLGDIYLIDGQKTVLA 210
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+ + Y L K GV+L G+ VKD + +++L+DGT + L+W+ GV T
Sbjct: 211 PMSKKAQEYTEKALLKKGVKLKMGVFVKDFVNDEVVLSDGTILEARNLIWAAGVSAKTF- 269
Query: 124 KSLDLPK--SPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGK 180
K +D + G R+ D + ++ +++A+GD C + P LAQVA +Q
Sbjct: 270 KGIDDKEYLGRGKRMKTDAYNKMEGFDNIYAIGDSCIMTADPNYPEGHPQLAQVAIQQAD 329
Query: 181 YLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 240
L AN D + PF Y GSMA IGR +A+ DL +N + +
Sbjct: 330 NLV-------------ANMNNDFQKPKPFSYVDKGSMAIIGRNEAVADLPKN-----IFI 371
Query: 241 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
GF +W +W ++ +V++RN+ NW ++
Sbjct: 372 KGFWAWAIWAFIHIMSLVNFRNKMRAFYNWVGYYI 406
>gi|116329586|ref|YP_799305.1| NADH dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116332475|ref|YP_802192.1| NADH dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|116122479|gb|ABJ80372.1| NADH dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116127342|gb|ABJ77434.1| NADH dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
Length = 422
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 145/284 (51%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN- 60
L+G E K+ LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA
Sbjct: 149 LSGDPEVVKA-LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEAAP 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L++FD L + +L GV ++ G V D++ + + L + + ++W+ GV
Sbjct: 208 RLLTTFDPSLGEFTKKRLESRGVEVLTGTRVIDINERGVQLEEKM-ITTQTVIWAAGVQA 266
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+T+ +L + GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG
Sbjct: 267 NTIASTLGVTLDRGGRVIVDEFCNIEGHPEVFVIGDIANYSKGLERP-LPGVSPVAMQQG 325
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+Y+ +L+ G N + F Y GSMATIGR A+ + L
Sbjct: 326 RYVAALIQ------GDLKNKKR-----KSFRYVDKGSMATIGRTDAVAQMGV------LR 368
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G W W +L V ++N+ + + W +++ R +R+
Sbjct: 369 MRGLFGWFAWLFVHLFYQVGFKNKVTILITWVWSYIAFRAEARV 412
>gi|25028149|ref|NP_738203.1| NADH dehydrogenase [Corynebacterium efficiens YS-314]
gi|259507207|ref|ZP_05750107.1| NADH dehydrogenase [Corynebacterium efficiens YS-314]
gi|23493433|dbj|BAC18403.1| NADH dehydrogenase [Corynebacterium efficiens YS-314]
gi|259165150|gb|EEW49704.1| NADH dehydrogenase [Corynebacterium efficiens YS-314]
Length = 471
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 140/272 (51%), Gaps = 31/272 (11%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSFD 67
E+ RLL VVVG GPTGVE +G+L++ R + Y++ + L++ A ++L F
Sbjct: 164 ERERLLTFVVVGAGPTGVELAGQLAEMAHRTLAGVYTNFNPSSAKIILLDGAPQVLPPFG 223
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLI--LNDGTE--VPYGLLVWSTGVGPSTL 122
RL A L K GV + + +V DVD + + DG E +P +WS GV S L
Sbjct: 224 KRLGRNAQRTLEKLGVTVKLNALVTDVDEEAVTYKTKDGEEHRIPSFCKIWSAGVAASPL 283
Query: 123 VKSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 178
K + + GR+ ++ L V +++F VGD L++ LP +AQVA +
Sbjct: 284 GKLIADQAGVEVDRAGRVKVNRDLSVGEYKNIFVVGDMMA-LDN-----LPGVAQVAIQG 337
Query: 179 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 238
G+Y + +I GR++ + + F Y GSMAT+ R+ A+V + + +
Sbjct: 338 GEY---VAEQIAAEAEGRSSDER-----EDFDYFDKGSMATVSRFSAVVKMGK------V 383
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+ GF+ WL+W +L +V +RNRF A++W
Sbjct: 384 EVTGFIGWLLWLGVHLMFLVGFRNRFVSAISW 415
>gi|399022254|ref|ZP_10724332.1| NADH dehydrogenase, FAD-containing subunit [Chryseobacterium sp.
CF314]
gi|398085197|gb|EJL75859.1| NADH dehydrogenase, FAD-containing subunit [Chryseobacterium sp.
CF314]
Length = 422
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 137/274 (50%), Gaps = 33/274 (12%)
Query: 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEA-NEILSSFDDR 69
+L + V+ GGGPTGVE +G L++ + Y +K + ++ LI+A +LS +
Sbjct: 153 QKLQNVVIAGGGPTGVELAGMLAEMGRYIAEKEYPEIKLALSNLYLIDALPTLLSPMSKK 212
Query: 70 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 128
+ A L K GV+++ + VKD K+IL+DG + L+W++G V ++
Sbjct: 213 AQETACQTLKKLGVKIILNVSVKDYVDGKVILSDGKRIETETLIWTSG------VIGREV 266
Query: 129 PKSPGGRIG------IDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKY 181
P P R+G ++ + +V + +++ +GD C E P LAQVA +QGK
Sbjct: 267 PGIPEDRVGHGRRILVNAYNQVEGINNIYVLGDLCLQLTEDPYPKGHPQLAQVAIQQGKN 326
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
L RI +D ++ PF Y GSMA I ++ A+VDL + S
Sbjct: 327 LGRNFKRI-----------EDEKVLVPFEYNDKGSMAIISKFNAVVDLPK------FSFE 369
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
GF++WL W ++ +V + N+ +A++W F+
Sbjct: 370 GFIAWLTWLFIHIIPLVGFGNKIRLAMDWFRLFI 403
>gi|89053357|ref|YP_508808.1| cyclic nucleotide-regulated FAD-dependent pyridine
nucleotide-disulfide oxidoreductase [Jannaschia sp.
CCS1]
gi|88862906|gb|ABD53783.1| cyclic nucleotide-regulated FAD-dependent pyridine
nucleotide-disulfide oxidoreductase [Jannaschia sp.
CCS1]
Length = 546
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 141/279 (50%), Gaps = 26/279 (9%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFD 67
E K L V+GGG +G+E GE+++ I R ++ + +D + + ++E A+++L+
Sbjct: 156 EVKRGALTFTVIGGGFSGIETVGEMAELIDRSLKYYPNVSRDEVRIIVLEFADKVLAEMP 215
Query: 68 DRLRHYATTQLSKSGVR--LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
++LR YA QL K GV L GI +Q + DG + +V + G P+ +VK
Sbjct: 216 EKLRAYAQAQLEKRGVEVCLNTGIASATGTQ-ITTTDGDVIDTRTVVATIGNAPAPVVKR 274
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS--GYLESTG--KTVLPALAQVAERQGKY 181
+DLP + GRI ++ L VP V+++GDC+ +E + P AQ A R+ K
Sbjct: 275 MDLPLT-QGRIAVERDLSVPGRDGVWSLGDCALIPMVEDANAREDYAPPTAQFAVREAKQ 333
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
L + + R A D PF Y GSMA++G + + D+ G+ L
Sbjct: 334 LAANIKR-----------AVDGTALKPFEYTSKGSMASLGARRGIADV------MGIRLT 376
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
GFL+W++WR+ Y+ + + + +V +W +V R +
Sbjct: 377 GFLAWVLWRAYYVAFLPGFPAKVWVLSHWVLDWVTPRSL 415
>gi|265985530|ref|ZP_06098265.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella sp. 83/13]
gi|306838133|ref|ZP_07470990.1| NADH dehydrogenase [Brucella sp. NF 2653]
gi|264664122|gb|EEZ34383.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella sp. 83/13]
gi|306406870|gb|EFM63092.1| NADH dehydrogenase [Brucella sp. NF 2653]
Length = 424
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 144/276 (52%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F +
Sbjct: 156 RQALLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPE 215
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 216 DLSTYARKALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 274
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ +++
Sbjct: 275 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGHPVPGIAPAAKQQGAYVATVIR 333
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ ++ PF YRH G++ATIG+ A+VD+ + + L G ++W
Sbjct: 334 ----------SRVENKTPPLPFRYRHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 377
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 378 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 413
>gi|313676638|ref|YP_004054634.1| fad-dependent pyridine nucleotide-disulfide oxidoreductase
[Marivirga tractuosa DSM 4126]
gi|312943336|gb|ADR22526.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Marivirga tractuosa DSM 4126]
Length = 437
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 129/271 (47%), Gaps = 27/271 (9%)
Query: 7 SEEEK-SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEANEIL- 63
S+EEK RL++ V+VGGGPTGVE +G L + + Y + + +++ L+E + L
Sbjct: 158 SDEEKIERLMNIVIVGGGPTGVELAGALGELKKHVLPNDYPDLDFNRLNIYLVEGMDRLL 217
Query: 64 ---SSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
S F D+ A L K V + + +V D +K++ N+ +P L+W GV
Sbjct: 218 GGMSEFADK---KAQKYLKKFEVNVKLNTMVDSYDGEKVVFNNNETIPAATLLWGAGVM- 273
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+++ L R +D + V +++AVGD + P LA VA +QG
Sbjct: 274 GNVIEGLSEQSVKNSRYKVDRYNLVEGTDNIYAVGDIALMETEDFPKGHPMLAPVAMQQG 333
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+ L N + G PF Y GSMAT+GR KA+VDL +N L
Sbjct: 334 ERLSK--NILASLKGKEQK---------PFKYLDKGSMATVGRNKAVVDLPKN-----LH 377
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
GF +W +W +L +V +RN+ + NW
Sbjct: 378 FGGFFAWFIWMFVHLISIVGFRNKIVILSNW 408
>gi|317480142|ref|ZP_07939252.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides sp.
4_1_36]
gi|316903689|gb|EFV25533.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides sp.
4_1_36]
Length = 428
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 136/271 (50%), Gaps = 20/271 (7%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILS 64
++EE+ RL+ +VGGG TG+E +G L++ + Q Y + + + + L++ ++ +LS
Sbjct: 158 NKEERRRLMTFAIVGGGATGIELAGALAEMRKFVLPQDYPDLNINEMRIILLDGSSRLLS 217
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+F + L K V + + V ++ +L LNDGT + + W GV ++L
Sbjct: 218 AFSEESSKEVADYLKKRDVEIKLNQRVMGYENYQLALNDGTAIDTKNVFWVAGVKANSLQ 277
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
PG R+ +D + R+ ++FA+GD + + P + Q A +Q + L
Sbjct: 278 GLPADAYGPGNRLKVDTYNRLSQYPNIFAIGDTALMISEEYPKGHPQVVQPAIQQARNLI 337
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
L R A + ++ PF+Y++ GSMATIGR A+V+L K L GF
Sbjct: 338 RNLQR--------AETGLPLQ---PFIYQNKGSMATIGRNHAVVEL------KKLRFGGF 380
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
+W VW +L +V +NR ++ V+W ++
Sbjct: 381 PAWAVWLFIHLMSIVGVKNRLFIFVDWMWSY 411
>gi|408370120|ref|ZP_11167899.1| NADH dehydrogenase (ubiquinone) [Galbibacter sp. ck-I2-15]
gi|407744595|gb|EKF56163.1| NADH dehydrogenase (ubiquinone) [Galbibacter sp. ck-I2-15]
Length = 436
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 137/274 (50%), Gaps = 22/274 (8%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEANE-ILS 64
S +E+ L++ V+VGGGPTGVE +G L++ + + Y + + ++++++ +L
Sbjct: 153 SLDEQDALMNFVIVGGGPTGVELAGALAEIKKGILPKDYPDLDTRRAQINIVQSSDRVLD 212
Query: 65 SFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+ A L K GV + + +V D + N ++W+ GV L+
Sbjct: 213 GMSEVASRKAEEFLEKMGVNIWKDTLVTGYDGDIVSTNSELTFRTATMIWAAGV-EGALI 271
Query: 124 KSLDLPKS--PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 181
L + PG R+ ++E+L+V +++FA+GD + P +AQVA +QG+
Sbjct: 272 DGLKTSECLLPGNRLKVNEFLQVSHYKNIFAIGDIACMTSEDYPRGHPMVAQVAMQQGRN 331
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
L L +I + D++ PFVY+ G+MATIGR KA+VDL K
Sbjct: 332 LGDNLLKI-------LENKTDLK---PFVYKDKGTMATIGRNKAVVDLPSWK------FQ 375
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
GF +W VW +L ++ +RNR V VNW ++
Sbjct: 376 GFFAWFVWMFVHLLSLIGFRNRAIVFVNWVYNYI 409
>gi|124002561|ref|ZP_01687414.1| NADH dehydrogenase [Microscilla marina ATCC 23134]
gi|123992390|gb|EAY31758.1| NADH dehydrogenase [Microscilla marina ATCC 23134]
Length = 453
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 140/281 (49%), Gaps = 40/281 (14%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN------- 60
E+++ + V+VGGGPTGVE +G L++ +++ KDY + L+E +
Sbjct: 162 HEKRNSYMDYVIVGGGPTGVEVAGALAEL------KKHVFPKDYRELNLMEMDIHLVEAG 215
Query: 61 -EILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVG 118
+L + ++ A L K GV++ + VK D ++ L E+ LVW+ GV
Sbjct: 216 PRLLGAMSEKSGAKAQQFLEKMGVKVHLNTSVKSYDGYRVTLGSDEELITKTLVWAAGVK 275
Query: 119 PSTL----VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
+ + V+S+ G R+ ++ + +V +++AVGD + ++ P +A
Sbjct: 276 GAPIDGIRVESM----VGGNRLKVNHFNQVEGYDNIYAVGDIAAMIDDDNPKGHPMMAPP 331
Query: 175 AERQGKYLF-SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK 233
A +QG++L +LLN+ KD + PF Y GSMATIGR KA+V++
Sbjct: 332 AMQQGRHLAKNLLNKY----------EKDRPM-KPFKYFDKGSMATIGRNKAVVEM---- 376
Query: 234 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
G GF +WL+W +L +V +RNR V +NW ++
Sbjct: 377 -PNGSKTQGFFAWLIWMFIHLMYLVGFRNRLLVLINWVMSY 416
>gi|423306876|ref|ZP_17284875.1| hypothetical protein HMPREF1072_03815 [Bacteroides uniformis
CL03T00C23]
gi|423308540|ref|ZP_17286530.1| hypothetical protein HMPREF1073_01280 [Bacteroides uniformis
CL03T12C37]
gi|392677961|gb|EIY71373.1| hypothetical protein HMPREF1072_03815 [Bacteroides uniformis
CL03T00C23]
gi|392686981|gb|EIY80279.1| hypothetical protein HMPREF1073_01280 [Bacteroides uniformis
CL03T12C37]
Length = 424
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 136/271 (50%), Gaps = 20/271 (7%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILS 64
++EE+ RL+ +VGGG TG+E +G L++ + Q Y + + + + L++ ++ +LS
Sbjct: 154 NKEERRRLMTFAIVGGGATGIELAGALAEMRKFVLPQDYPDLNINEMRIILLDGSSRLLS 213
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+F + L K V + + V ++ +L LNDGT + + W GV ++L
Sbjct: 214 AFSEESSKEVADYLKKRDVEIKLNQRVMGYENYQLALNDGTAIDTKNVFWVAGVKANSLQ 273
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
PG R+ +D + R+ ++FA+GD + + P + Q A +Q + L
Sbjct: 274 GLPADAYGPGNRLKVDTYNRLSQYPNIFAIGDTALMISEEYPKGHPQVVQPAIQQARNLI 333
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
L R A + ++ PF+Y++ GSMATIGR A+V+L K L GF
Sbjct: 334 RNLQR--------AETGLPLQ---PFIYQNKGSMATIGRNHAVVEL------KKLRFGGF 376
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
+W VW +L +V +NR ++ V+W ++
Sbjct: 377 PAWAVWLFIHLMSIVGVKNRLFIFVDWMWSY 407
>gi|373948532|ref|ZP_09608493.1| NADH dehydrogenase [Shewanella baltica OS183]
gi|386325623|ref|YP_006021740.1| NADH dehydrogenase [Shewanella baltica BA175]
gi|333819768|gb|AEG12434.1| NADH dehydrogenase [Shewanella baltica BA175]
gi|373885132|gb|EHQ14024.1| NADH dehydrogenase [Shewanella baltica OS183]
Length = 429
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 128/240 (53%), Gaps = 18/240 (7%)
Query: 19 VVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDRLRHYATT 76
+VG G TGVE + EL I Y ++ K ++ V LIEA+ +IL +++ A +
Sbjct: 170 IVGAGATGVELAAELHHVIESVKEYGYLNISKHHLDVHLIEASPKILPQLPEKVSARAQS 229
Query: 77 QLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGV-GPSTLVKSLDLPKSPGG 134
L K G++L G+ VK+V +Q + DG + L VW+ GV GP+ K LP +P
Sbjct: 230 VLDKIGIKLHLGVQVKEVTAQGFVTPDGDVIEASLKVWAAGVKGPAVCAKFTSLPITPRN 289
Query: 135 RIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF-SLLNRIGKAG 193
+I +D +RV +D++A+GDC+ + GK V P AQ A++ L+ +++NR+
Sbjct: 290 QIDVDACMRVKGQEDIYAIGDCAALILENGKAV-PPRAQSADQMADRLYKNIVNRLQDKA 348
Query: 194 GGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAY 253
EL PFVY+ GS+ ++ R+ A+ +L N S + G ++ L++ S Y
Sbjct: 349 ----------EL--PFVYKDYGSLVSLSRFSAVGNLMGNLRSGDFFIEGHVARLMYVSLY 396
>gi|260429585|ref|ZP_05783562.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Citreicella sp. SE45]
gi|260420208|gb|EEX13461.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Citreicella sp. SE45]
Length = 428
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 139/280 (49%), Gaps = 27/280 (9%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFD 67
E+ LL VVG GPTGVE G +++ + + + ++ V L+EA +L +F
Sbjct: 153 EREALLTFAVVGAGPTGVELVGIIAELAQTSLVREFRNIDTRQARVLLVEAGPRVLPAFP 212
Query: 68 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTE-VPYGLLVWSTGVGPSTLVKS 125
+ L YA L + GV + G V D + + L GTE +P +W+ GV S +
Sbjct: 213 ESLSDYAAGALKRLGVEVRTGTPVTHCDPEGITL--GTEHIPARTAIWAAGVKASRAAQW 270
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
L + GR+ + E L + ++F +GD + + GK V P +A A++QG+++
Sbjct: 271 LGVAGDRAGRVPVTEDLTLEGHPEIFVIGDTAAATNADGKPV-PGIAPAAKQQGEFVARK 329
Query: 186 LN-RIG-KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
L R G + GR FVYRH GS+ATIGR A+ D + + L G
Sbjct: 330 LKARFGLRRDPGR------------FVYRHQGSLATIGRKAAVADFGR------IRLKGA 371
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L+W VW A++ ++ RNR VA++W + G+ +R+
Sbjct: 372 LAWWVWGIAHIYFLIGTRNRMAVALSWLWSHASGQKSARL 411
>gi|111025624|ref|YP_708044.1| NADH dehydrogenase [Rhodococcus jostii RHA1]
gi|110824603|gb|ABG99886.1| NADH dehydrogenase [Rhodococcus jostii RHA1]
Length = 507
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 138/282 (48%), Gaps = 35/282 (12%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH--VKDYIHVTLIEANEILSSF 66
+E+++LL VVVG GPTGVE +G+L++ R + Y + +D + + A +L F
Sbjct: 205 DERAKLLTFVVVGAGPTGVEMAGQLTELAHRTLVGAYRNFDTRDARIILVDAAATVLPPF 264
Query: 67 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPST 121
L A L K GV + G V DVD+ L + D + VWS GV S
Sbjct: 265 GTNLGTKAAAVLEKLGVEIRLGSTVTDVDADGLTVRDTAGENHRIDAVCKVWSAGVAASP 324
Query: 122 LVKSL------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
L L +L ++ GRI ++E L VP +VF VGD + LP +AQVA
Sbjct: 325 LGAQLAEQAGAELDRA--GRIAVEEDLTVPGHPNVFVVGDM------MSRDRLPGVAQVA 376
Query: 176 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGD--PFVYRHLGSMATIGRYKALVDLRQNK 233
+ G Y + KA A+D + D PF YR GSMA I R+KA+ + +
Sbjct: 377 IQGGCYAAKQITYQVKA------LAEDRPVPDRTPFRYRDKGSMAIIARFKAVTKIGR-- 428
Query: 234 ESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
L L GFL+W++W + ++ VV +R+R ++W T +
Sbjct: 429 ----LELTGFLAWVLWLAVHVVYVVGFRSRLATLLSWTWTLL 466
>gi|374375800|ref|ZP_09633458.1| NADH dehydrogenase (ubiquinone) [Niabella soli DSM 19437]
gi|373232640|gb|EHP52435.1| NADH dehydrogenase (ubiquinone) [Niabella soli DSM 19437]
Length = 431
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 132/274 (48%), Gaps = 36/274 (13%)
Query: 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANE-ILSSFDDR 69
+L VV G GPTGVE SG ++ ++ V++ Y + + + L++ + +L ++
Sbjct: 157 KLATIVVAGAGPTGVELSGMFAEMRIKIVQKDYPELAGRQVGKIYLVDGGKAVLGPMSEQ 216
Query: 70 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 128
+HY+ L K GV + G VKD + L+DGT + L+W+ GV T +
Sbjct: 217 SQHYSKESLEKLGVIIKLGTTVKDFKDDTVFLSDGTTIATTTLIWAAGVTAQTFE---GI 273
Query: 129 PKSPGGR---IGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFS 184
P GR + +D + ++ +++A+GD C + P LAQVA +Q K
Sbjct: 274 PTEAYGRARRMLVDAFNKINGFSNIYALGDTCIQTTDPAFPNGHPQLAQVAIQQAK---- 329
Query: 185 LLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 240
N K++ L + PF+Y GSMA IGR KA+ DL + K L
Sbjct: 330 -------------NLGKNLLLPEGSRKPFIYNDKGSMAIIGRNKAVADLEKPK----LHF 372
Query: 241 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
GF++WL+W ++ ++++RNR NW +
Sbjct: 373 NGFIAWLIWLFIHVMSLLNFRNRLRTLYNWVGAY 406
>gi|306845837|ref|ZP_07478405.1| NADH dehydrogenase [Brucella inopinata BO1]
gi|306273729|gb|EFM55567.1| NADH dehydrogenase [Brucella inopinata BO1]
Length = 424
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 143/276 (51%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F +
Sbjct: 156 RQALLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPE 215
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 216 DLSAYARKALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 274
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 275 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGHPVPGIAPAAKQQGAYVAKVIR 333
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ ++ PF Y+H G++ATIGR A+VD+ + + L G ++W
Sbjct: 334 ----------SRVENKTPPLPFRYKHQGNLATIGRGAAVVDMGR------IRLKGTIAWW 377
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 378 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 413
>gi|418736047|ref|ZP_13292450.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|421096509|ref|ZP_15557212.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
borgpetersenii str. 200801926]
gi|410360660|gb|EKP11710.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
borgpetersenii str. 200801926]
gi|410748054|gb|EKR00955.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|456886608|gb|EMF97748.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
borgpetersenii str. 200701203]
Length = 422
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 145/284 (51%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN- 60
L+G E K+ LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA
Sbjct: 149 LSGDPEVVKA-LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEAAP 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L++FD L + +L GV ++ G V D++ + + L + + ++W+ GV
Sbjct: 208 RLLTTFDPSLGEFTKKRLESRGVEVLTGTRVIDINERGVQLEEKM-ITTQTVIWAAGVQA 266
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+T+ +L + GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG
Sbjct: 267 NTIASTLGVTLDRGGRVIVDEFCNIEGHPEVFVIGDIAHYSKGLERP-LPGVSPVAMQQG 325
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+Y+ +L+ G N + F Y GSMATIGR A+ + L
Sbjct: 326 RYVAALIQ------GDLKNKKR-----KSFRYVDKGSMATIGRTDAVAQMGV------LR 368
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G W W +L V ++N+ + + W +++ R +R+
Sbjct: 369 MRGLFGWFAWLFVHLFYQVGFKNKVTILITWVWSYIAFRAEARV 412
>gi|397639280|gb|EJK73483.1| hypothetical protein THAOC_04891 [Thalassiosira oceanica]
Length = 624
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 141/315 (44%), Gaps = 68/315 (21%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY-SHVKDYIHVTLIEA-NEILSSF 66
+E RLL VVGGGPTGVE S EL+DF DV + Y + + + I + L+E +L F
Sbjct: 283 KEIDRLLTVFVVGGGPTGVELSAELADFAHSDVAKIYGADISERIKIVLVEVMPRLLGPF 342
Query: 67 DDRLRHYATTQLSKSGVRLVRGI------VKDVDSQKLI-------------LNDGTEVP 107
D L A L GV + G +DV Q + N TE
Sbjct: 343 DASLAEVARDHLVSKGVEVRTGTAVTHVEARDVTCQPSLPRGATPEQKKEAEANSQTE-E 401
Query: 108 YGLLVWSTGVGPSTLVKSL--DLPKSPGGRIGIDEWLRVPSVQDVFAVGDC--SGYLEST 163
G LVW+ G+G LVK L L +S + +DE LRV V+A+GDC SG+
Sbjct: 402 MGCLVWAAGIGARPLVKKLAQKLGQSDMRGLKVDEDLRVLGTDGVYAIGDCALSGF---- 457
Query: 164 GKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRY 223
P AQVA +QGK+ +G+A ++S FVY H GS+ +G
Sbjct: 458 -----PPTAQVAAQQGKH-------VGRAIRDGSDSK--------FVYHHAGSLCCLGSS 497
Query: 224 KALVDL------------------RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFY 265
+ + K+ + S+ G ++ +WRS Y T+++S ++
Sbjct: 498 NGIAQMVVPGGSGANNVWDLLGAPAVGKDGEQRSVTGLPAFALWRSLYFTKLLSTSSKMS 557
Query: 266 VAVNWATTFVFGRDI 280
+ +W ++GRDI
Sbjct: 558 LGGDWINAHIWGRDI 572
>gi|418720839|ref|ZP_13280033.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
borgpetersenii str. UI 09149]
gi|410742743|gb|EKQ91490.1| pyridine nucleotide-disulfide oxidoreductase [Leptospira
borgpetersenii str. UI 09149]
Length = 422
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 145/284 (51%), Gaps = 23/284 (8%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN- 60
L+G E K+ LL+ V++GGGPTGVE +G +++ + +R + + + +TLIEA
Sbjct: 149 LSGDPEVVKA-LLNYVIIGGGPTGVELAGSIAELSHQIIRDEFHTIDPALSKITLIEAAP 207
Query: 61 EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L++FD L + +L GV ++ G V D++ + + L + + ++W+ GV
Sbjct: 208 RLLTTFDPSLGEFTKKRLESRGVEVLTGTRVIDINERGVQLEEKM-ITTQTVIWAAGVQA 266
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+T+ +L + GGR+ +DE+ + +VF +GD + Y + + LP ++ VA +QG
Sbjct: 267 NTIASTLGVTLDRGGRVIVDEFCNIEGHPEVFVIGDIANYSKGL-EHPLPGVSPVAMQQG 325
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+Y+ +L+ G N + F Y GSMATIGR A+ + L
Sbjct: 326 RYVAALIQ------GDLKNKKR-----KSFRYVDKGSMATIGRTDAVAQMGV------LR 368
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G W W +L V ++N+ + + W +++ R +R+
Sbjct: 369 MRGLFGWFAWLFVHLFYQVGFKNKVTILITWVWSYIAFRAEARV 412
>gi|319949031|ref|ZP_08023128.1| NADH dehydrogenase [Dietzia cinnamea P4]
gi|319437319|gb|EFV92342.1| NADH dehydrogenase [Dietzia cinnamea P4]
Length = 474
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 138/274 (50%), Gaps = 30/274 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEANE-ILSS 65
EEE+ RLL V+VG GPTGVE +G++++ +R + + V L++A +L
Sbjct: 168 EEERRRLLTFVIVGAGPTGVEMAGQVAELAQHTLRNSFRRIDPASARVILLDAAPAVLPP 227
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPS 120
F + L + A +L K GV + + +V +VD Q + + D + +WS GV S
Sbjct: 228 FGNNLGNAARARLEKMGVEIQLNAMVTNVDYQGIEVKDPDGSVRRIDASCKIWSAGVKAS 287
Query: 121 TLVKSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
L K L D GR+ +++ L +P ++F VGD L++ LP +AQVA
Sbjct: 288 PLGKQLADQTDAEIDRAGRVLVNKDLSLPGHPEIFVVGDMMS-LDN-----LPGVAQVAI 341
Query: 177 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
+ GKY + I + GR + + PF Y GSMAT+ RY A+V +
Sbjct: 342 QGGKYAAKQI--IAEVEKGRTPAER-----KPFKYFDKGSMATVSRYSAVVKM------G 388
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+ ++GF++W++W +L ++ ++NR +W
Sbjct: 389 PIEISGFIAWVMWLVVHLAYLIGFKNRITTMFSW 422
>gi|305665363|ref|YP_003861650.1| putative NADH dehydrogenase [Maribacter sp. HTCC2170]
gi|88710118|gb|EAR02350.1| putative NADH dehydrogenase [Maribacter sp. HTCC2170]
Length = 425
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 136/273 (49%), Gaps = 23/273 (8%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSS 65
E E+ LL+ ++G GPTGVE +G ++ + Y H+ + + L E A +L
Sbjct: 154 ENERRSLLNFCIIGAGPTGVELAGAFAELKNNVFPKDYKHLNISEMQIHLFEGAARVLPP 213
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV-GPSTLV 123
+ A L + GV + + IV+D D + ++L + + +W+ GV G +
Sbjct: 214 MSETASRKAIKFLDRLGVNVHLNTIVQDYDGETMVLKNKETIRTKNFIWTAGVTGAAIDG 273
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES-TGKTVLPALAQVAERQGKYL 182
+ ++ ++ R ++ + +V ++VFA+GD + Y+E+ T P +AQ A +QG++L
Sbjct: 274 FNGEVLENRLNRFKVNAFSQVEGYKNVFAIGDIA-YMETETYPKGHPQVAQPAIQQGEHL 332
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
L N KD + PF Y G+MAT+GR KA+VDL+ K G
Sbjct: 333 AKNL----------KNLVKDKNMV-PFKYYDKGTMATVGRNKAVVDLKNAK------FGG 375
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
F +W +W +L +V +RNR V NWA ++
Sbjct: 376 FFAWFIWMFVHLMALVGFRNRVIVFFNWAYNYI 408
>gi|358459000|ref|ZP_09169203.1| NADH dehydrogenase (ubiquinone) [Frankia sp. CN3]
gi|357077656|gb|EHI87112.1| NADH dehydrogenase (ubiquinone) [Frankia sp. CN3]
Length = 504
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 143/284 (50%), Gaps = 35/284 (12%)
Query: 4 AGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANEI 62
A E + RLL VVVG GPTGVE +G++++ R +R+ + + + L++A +
Sbjct: 168 ASTDEADIERLLTFVVVGAGPTGVEMAGQIAELAHRTLRRDFRSIDPRKARIVLLDAAPV 227
Query: 63 -LSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILN--DGTE--VPYGLLVWSTG 116
L +F D+L YA +L K GV + G +V DVD+ + + DGT + VW+ G
Sbjct: 228 VLPAFGDKLGAYAVQRLEKLGVEVQLGAMVTDVDATGIEVKNADGTRRRIESVCKVWAAG 287
Query: 117 VGPSTLVKSLDLPKSPG----GRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
V S L + L G GR+ ++ L +P +V+ VGD + LP +A
Sbjct: 288 VQASPLGRQLAQQSGAGLDRAGRVQVEPDLTLPGHPEVYVVGDMISLNQ------LPGVA 341
Query: 173 QVAERQGKYLF-SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQ 231
QVA + G++ + RI + E G F Y GSMATI R+ A+ + +
Sbjct: 342 QVAIQGGRHAARDIRARI-----------EGRESGRLFKYHDKGSMATISRFSAVASIGR 390
Query: 232 NKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
L L GF++WL+W + +L ++ +++R ++WA +FV
Sbjct: 391 ------LKLTGFVAWLMWLAVHLVYIIGFKHRVTTLLHWAVSFV 428
>gi|294853713|ref|ZP_06794385.1| NADH dehydrogenase [Brucella sp. NVSL 07-0026]
gi|294819368|gb|EFG36368.1| NADH dehydrogenase [Brucella sp. NVSL 07-0026]
Length = 424
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 144/276 (52%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFDD 68
+ LL +VGGGPTGVE +G +++ R + + ++ + V L+EA ILS+F +
Sbjct: 156 RQALLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTWQARVLLLEAGPRILSAFPE 215
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 216 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 274
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 275 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR 333
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 334 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 377
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 378 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 413
>gi|433775444|ref|YP_007305911.1| NADH dehydrogenase, FAD-containing subunit [Mesorhizobium
australicum WSM2073]
gi|433667459|gb|AGB46535.1| NADH dehydrogenase, FAD-containing subunit [Mesorhizobium
australicum WSM2073]
Length = 421
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 144/276 (52%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEA-NEILSSFDD 68
+ LL V+VGGGPTGVE +G +++ +R + ++ V LIEA + IL++F
Sbjct: 155 RQALLTIVIVGGGPTGVELAGTIAELAHDTLRGEFRNIDTRQTRVVLIEAGDRILANFAP 214
Query: 69 RLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
+L YA L + GV + G V D+ ++ D T +P ++W+ GV S + L+
Sbjct: 215 KLSDYARKALERLGVSVELGRAVTRCDADGVVFGD-TILPARTILWAAGVAASPAAEWLE 273
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
GR+ ++ L VP ++F +GD + L G+ V P +A A+++G+++
Sbjct: 274 AKADRAGRVLVEPDLSVPGSPEIFVIGDAAHVLRPDGRPV-PGVAPSAKQEGRHV----- 327
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
A +A A D PF Y+H G +ATIG+ A +D + L G+L+W
Sbjct: 328 ----AATVKARLAGDTS-PRPFHYKHAGDLATIGKRAAAIDF------GWIKLTGWLAWW 376
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W A++ ++ +RNR V+++W +V G+ +R+
Sbjct: 377 LWGIAHIYFLIGFRNRLAVSLSWLWIYVTGQRSARL 412
>gi|21673208|ref|NP_661273.1| NADH dehydrogenase [Chlorobium tepidum TLS]
gi|21646290|gb|AAM71615.1| NADH dehydrogenase [Chlorobium tepidum TLS]
Length = 430
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 141/274 (51%), Gaps = 25/274 (9%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANE-ILSSF 66
+E+ + L V+VGGGPTGVE +G + + + + Y H+ + + ++EA E IL +F
Sbjct: 150 KERKKQLTFVIVGGGPTGVELAGSIGEMSRYTLSKFYRHIDPKLTRIFIVEAAERILGTF 209
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE-VPYGLLVWSTGVGPSTLVK 124
L AT +L K GV++ +V DVD+ + + G E + ++W+ GV S + +
Sbjct: 210 SPELSSKATRELEKLGVQVWTSSMVSDVDADGVQI--GRERIEAATVLWAAGVKASEIGQ 267
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
++ + GRI ++ L +P +VF GD + Y G T LP +A VA ++GK +
Sbjct: 268 NMGVQTDRSGRIMVEADLSLPGHPEVFVGGDQACYTLENGST-LPGMAPVAMQEGKAIGR 326
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
++ K + PF YR G MATIGR +A+V++ L G +
Sbjct: 327 MILDDLKGKPRK-----------PFKYRDKGQMATIGRNRAIVEI------GNLKFDGAI 369
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWA-TTFVFG 277
+W W ++ + ++++R +V + WA + F FG
Sbjct: 370 AWFTWLLVHIYYLSTFKHRVFVLMQWAWSYFTFG 403
>gi|310814963|ref|YP_003962927.1| NADH dehydrogenase protein [Ketogulonicigenium vulgare Y25]
gi|385232518|ref|YP_005793860.1| NADH dehydrogenase transmembrane protein [Ketogulonicigenium
vulgare WSH-001]
gi|308753698|gb|ADO41627.1| NADH dehydrogenase protein [Ketogulonicigenium vulgare Y25]
gi|343461429|gb|AEM39864.1| putative NADH dehydrogenase transmembrane protein
[Ketogulonicigenium vulgare WSH-001]
Length = 420
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 141/278 (50%), Gaps = 23/278 (8%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFD 67
E+ LL ++G GPTGVE +G +++ R + + + + D + LIEA IL +F
Sbjct: 151 EREALLTFAIIGAGPTGVELAGIIAELAHRILPREFRRIDTDRARIMLIEAGPRILPAFS 210
Query: 68 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
L YA L K GV ++ G V + + ++L D + ++W+ GV S L
Sbjct: 211 PNLSDYAAQSLQKVGVEVLTGKPVTQISDKGIVLGD-EPIAARTVIWAAGVQASRAKDWL 269
Query: 127 D-LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
+ GR+ + L + D+F +GD + ++ES GK V P +A A++QG+Y L
Sbjct: 270 GGVEADRAGRVMVQPDLTLAGAPDIFVLGDTA-HVESDGKPV-PGVAPAAKQQGEYAAKL 327
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
+ + + PF Y+H+G++ATIGR A+++ + + G+L+
Sbjct: 328 IR----------TRLEGKDAPAPFKYKHMGNLATIGRNSAVIEFGK------FQMRGWLA 371
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W +W A++ ++ R+R V ++W F+ G++ +R+
Sbjct: 372 WWIWGFAHIYFLIGTRSRIVVLLSWLWIFISGQNSARL 409
>gi|241205463|ref|YP_002976559.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240859353|gb|ACS57020.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 421
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 143/277 (51%), Gaps = 23/277 (8%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VG GPTGVE +G +++ + + + ++ V L+EA +L +F +
Sbjct: 153 RDALLTFTIVGAGPTGVELAGIIAELAHFTLPKEFRNIDTRKTRVVLVEAGPRVLPTFAE 212
Query: 69 RLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L K GV + G V + ++ + + + T V +VW+ GV S + L
Sbjct: 213 ELSAYAQKALEKLGVEIHLGKPVTECNADGVKIGE-TFVASRTIVWAAGVTASPAARWLG 271
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+ GR+ +++ L P + +VF VGD + + GK V P +A A++QG Y+ ++
Sbjct: 272 VAADRAGRVVVEKDLSAPGLPEVFVVGDTASVMREDGKPV-PGIAPAAKQQGGYVAKVIR 330
Query: 188 -RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
RI G+ A PF Y H GS+ATIG+ A++D + K L G+++W
Sbjct: 331 ARI----SGKPTPA-------PFRYWHQGSLATIGKSAAIIDFGRIK------LKGWIAW 373
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W A++ ++ R+RF VA +W ++ G+ +R+
Sbjct: 374 WIWGLAHIYFLIGTRSRFSVAWSWLWIYLSGQHSARL 410
>gi|306840603|ref|ZP_07473357.1| NADH dehydrogenase [Brucella sp. BO2]
gi|306289403|gb|EFM60635.1| NADH dehydrogenase [Brucella sp. BO2]
Length = 441
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 142/273 (52%), Gaps = 21/273 (7%)
Query: 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDDRLR 71
LL +VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F + L
Sbjct: 176 LLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPEDLS 235
Query: 72 HYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 130
YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 236 TYARKALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLDAES 294
Query: 131 SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 190
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 295 DRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR--- 350
Query: 191 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 250
+ ++ PF YRH G++ATIG+ A+VD+ + + L G ++W W
Sbjct: 351 -------SRVENKTPPLPFRYRHQGNLATIGKGAAVVDMGR------IRLKGTIAWWFWG 397
Query: 251 SAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 398 IAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 430
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 15/121 (12%)
Query: 4 AGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRD--VRQRYSHVKD----YIHVTLI 57
AGI + + + H VVVG G G++ +L +R + QR H+ + T++
Sbjct: 13 AGIFQMDAANSPHIVVVGAGFGGLQLIRDLDGAKVRITLIDQRNHHLFQPLLYQVATTIL 72
Query: 58 EANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQK--LILNDGTEVPYGLLVWST 115
+EI + R ++ V + G V DVD+ + ++L +G EV Y +LV +T
Sbjct: 73 STSEIAWPIRNLFR-------DRAEVTTLLGTVIDVDTARKSVLLENGDEVSYDMLVLAT 125
Query: 116 G 116
G
Sbjct: 126 G 126
>gi|222147650|ref|YP_002548607.1| NADH dehydrogenase [Agrobacterium vitis S4]
gi|221734638|gb|ACM35601.1| NADH dehydrogenase [Agrobacterium vitis S4]
Length = 425
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 137/280 (48%), Gaps = 29/280 (10%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEANE-ILSSFDD 68
+ LL +VG GPTGVE +G +++ + + + + + V L+EA + +L SF
Sbjct: 153 REALLTFTIVGAGPTGVELAGIIAELAHKTLPKEFRAIDTRRTKVILVEAGQRVLPSFAP 212
Query: 69 RLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEV-----PYGLLVWSTGVGPSTLV 123
L YA L GV + G +DG ++ P +VW+ GV S
Sbjct: 213 ELSVYAQGVLENLGVEVRLG-----QPVTQCSSDGVQIGEQFTPSRTIVWAAGVQASAAS 267
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
+ L +P GR+ + + L P + DVF +GD + ++ T +P +A A++QG Y+
Sbjct: 268 RWLSVPADRAGRVVVGKDLTAPEMPDVFVIGDTASVMQGN-NTPVPGIAPAAKQQGAYVA 326
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
++ K G+ A PF YRH GS+ATIG+ A+VD + K L G
Sbjct: 327 KVIKARLK---GKPAPA-------PFHYRHQGSLATIGQSAAIVDFGKVK------LTGS 370
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L+W +W A++ ++ R+R VA +W ++ G+ +R+
Sbjct: 371 LAWWIWGLAHIYFLIGTRSRLAVAWSWLWIYLSGQHSARL 410
>gi|401840811|gb|EJT43479.1| NDI1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 513
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 155/296 (52%), Gaps = 31/296 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSF 66
+ E+ RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + + L+EA I L+ F
Sbjct: 222 DPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMF 281
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLVWSTGV 117
+ +L YA + L + +++ +R V V+ ++L+ E +PYG L+W+TG
Sbjct: 282 EKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKVTEETIPYGTLIWATGN 341
Query: 118 GPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
++ L +P+ + + ++ +L+V +VFA+GD + LP AQ
Sbjct: 342 KARPVITDLFKKIPEQNSSKRGLAVNSFLQVKGSNNVFAIGDNAF-------AGLPPTAQ 394
Query: 174 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD---------PFVYRHLGSMATIGRYK 224
VA ++ +YL +++ + + N + + D PF Y LG++A +G +
Sbjct: 395 VAHQEAEYLAKNFDKMAQIPNFQKNLSARKDKIDLLFEENNFRPFKYNDLGALAYLGSER 454
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
A+ +R K + + G +++ +WR YL+ ++S R+RF V +W F RD
Sbjct: 455 AIATIRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRFKVFFDWIKLAFFKRDF 509
>gi|383780865|ref|YP_005465431.1| putative pyridine nucleotide-disulfide oxidoreductase [Actinoplanes
missouriensis 431]
gi|381374097|dbj|BAL90915.1| putative pyridine nucleotide-disulfide oxidoreductase [Actinoplanes
missouriensis 431]
Length = 447
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 139/276 (50%), Gaps = 27/276 (9%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEA-NEILSSFD 67
+K R L VVVG GPTG E +G++++ R + +Y H+ + L++A +L++F
Sbjct: 154 DKERWLTFVVVGAGPTGTEMAGQIAELAHRTLPSQYRHIDTRKSRILLVDAVGAVLNTFG 213
Query: 68 DRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT---EVPYGLLVWSTGVGPSTLV 123
DRL A QL K GV ++ V VD+ + + + +P VW+ GV TL
Sbjct: 214 DRLSGRARDQLEKLGVEVMLNTKVVGVDTTGIEVETSSGRQRIPTMTKVWAAGVAAPTLA 273
Query: 124 KSLD----LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
L GR+ +++ VP ++F +GD G+ LP +AQVA + G
Sbjct: 274 TKLADAAGAKTDRAGRVLVEKDTTVPGHPEIFVLGDMMNLAGEDGRP-LPGVAQVAIQSG 332
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
++ ++I + GG+ + PF Y GS+ATI R+ A+ + + L
Sbjct: 333 RH---AADQIKRRLGGKPDK-------QPFKYFDKGSLATISRFSAVASIGK------LH 376
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
L+GF +W+VW + +L +V ++NR ++WA +F+
Sbjct: 377 LSGFPAWVVWVAVHLFYLVGFKNRVTAVLHWAVSFL 412
>gi|152999668|ref|YP_001365349.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Shewanella baltica OS185]
gi|151364286|gb|ABS07286.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Shewanella baltica OS185]
Length = 429
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 129/246 (52%), Gaps = 18/246 (7%)
Query: 19 VVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDRLRHYATT 76
+VG G TGVE + EL I Y ++ K ++ V LIEA+ +IL +R+ A
Sbjct: 170 IVGAGATGVELAAELHHVIESVKEYGYLNIAKHHLDVHLIEASPKILPQLPERVSARAQA 229
Query: 77 QLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGV-GPSTLVKSLDLPKSPGG 134
L K G+RL G+ VK+V I DG + GL VW+ GV GP LP +P
Sbjct: 230 VLDKIGIRLHIGVQVKEVTRDGFITQDGDVIKAGLKVWAAGVKGPKAFQNFTKLPITPRN 289
Query: 135 RIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF-SLLNRIGKAG 193
++ +D+ +RV QD++A+GDC+ ++S+G+ V P AQ A + LF +++NR+
Sbjct: 290 QVEVDDCMRVKGHQDIYALGDCALLIQSSGQPV-PPRAQAAAQMADTLFDNIVNRL---- 344
Query: 194 GGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAY 253
G+ A F+Y+ GS+ ++ R+ A+ +L N S + G ++ L++ S Y
Sbjct: 345 QGKPEKA--------FIYKDYGSLVSLSRFSAVGNLMGNLRSGTFFVEGHIARLMYISLY 396
Query: 254 LTRVVS 259
+ S
Sbjct: 397 QRHLAS 402
>gi|365759194|gb|EHN00998.1| Ndi1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 513
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 155/296 (52%), Gaps = 31/296 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSF 66
+ E+ RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + + L+EA I L+ F
Sbjct: 222 DPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMF 281
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLVWSTGV 117
+ +L YA + L + +++ +R V V+ ++L+ E +PYG L+W+TG
Sbjct: 282 EKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKVTEETIPYGTLIWATGN 341
Query: 118 GPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
++ L +P+ + + ++ +L+V +VFA+GD + LP AQ
Sbjct: 342 KARPVITDLFKKIPEQNSSKRGLAVNSFLQVKGSNNVFAIGDNAF-------AGLPPTAQ 394
Query: 174 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD---------PFVYRHLGSMATIGRYK 224
VA ++ +YL +++ + + N + + D PF Y LG++A +G +
Sbjct: 395 VAHQEAEYLAKNFDKMAQIPNFQKNLSARKDKIDLLFEENNFRPFKYNDLGALAYLGSER 454
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
A+ +R K + + G +++ +WR YL+ ++S R+RF V +W F RD
Sbjct: 455 AIATIRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRFKVFFDWIKLAFFKRDF 509
>gi|365899628|ref|ZP_09437519.1| putative NADH dehydrogenase FAD-containing subunit transmembrane
protein [Bradyrhizobium sp. STM 3843]
gi|365419589|emb|CCE10061.1| putative NADH dehydrogenase FAD-containing subunit transmembrane
protein [Bradyrhizobium sp. STM 3843]
Length = 424
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 139/273 (50%), Gaps = 24/273 (8%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFD 67
+++ L+ V++G GPTGVE +G +++ + + ++ + V LIEA +L+ F
Sbjct: 157 KRAALMTFVIIGAGPTGVELAGTIAELARSTLPPDFRNIDTHGTRVLLIEAGPRVLAGFP 216
Query: 68 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
D L YA L + GV +V G V D ++ ++ G ++ ++W+ GV S + L
Sbjct: 217 DDLSAYALKSLERIGVEVVLGQPVTDCNADGVVYG-GKQLDAKTIIWAAGVRASRAAEWL 275
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
+ P GR+ + L VP ++FA+GD G+ V P +A A+++G+Y +
Sbjct: 276 NAPADRAGRLQVAPDLTVPGHPEIFAIGDTITIPAWNGQPV-PGIAPAAKQEGRY---VA 331
Query: 187 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
I GGR+ S PF Y H GS+A IG+ A++D L L G ++W
Sbjct: 332 EAIKARLGGRSLS--------PFRYSHAGSLAQIGKRLAVIDF------GWLKLRGAIAW 377
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
+W A++ ++ RNR VA++W ++ RD
Sbjct: 378 WIWGLAHIYFLIGLRNRLAVALSW--LWIHARD 408
>gi|443318305|ref|ZP_21047561.1| NADH dehydrogenase, FAD-containing subunit [Leptolyngbya sp. PCC
6406]
gi|442782111|gb|ELR92195.1| NADH dehydrogenase, FAD-containing subunit [Leptolyngbya sp. PCC
6406]
Length = 452
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 143/296 (48%), Gaps = 41/296 (13%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSF 66
E++ L+ +V GGGPTGVE +G L+D ++Q + + D + L+E + +L F
Sbjct: 169 EQRQALMTFLVAGGGPTGVELAGALADLAYSTLKQDFRAIDTDATRIILVEGMDRLLPPF 228
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG---TEVPYGLLVWSTGVGPSTL 122
L +A L K V + + +V ++ ++ L G TE+ ++W+ GV S +
Sbjct: 229 PPELSAHAEAALKKQRVEVRTKTLVTSIEGDRVRLRSGDEETELRTKTVLWAAGVKASAM 288
Query: 123 VKSL------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
+ + D ++ GR+ ++ L +P+ ++F VGD + Y G+ LP +A VA
Sbjct: 289 GRIIADRTGSDCDRA--GRVIVEADLSLPNHANIFVVGDLAHYAHQGGQP-LPGVAPVAM 345
Query: 177 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
+QGKY+ L+ KA E PF YR GS+A IGR A+V+
Sbjct: 346 QQGKYVAKLIQHRLKA-----------EPIPPFYYRDAGSLAVIGRNAAVVNF------N 388
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW---------ATTFVFGRDISRI 283
L L GF +W++W ++ ++ + N+ V W + + GRD+ ++
Sbjct: 389 WLKLTGFPAWVIWLFVHIFYLIEFDNKVVVMTQWMWGYFTRNQGSRLITGRDVDKV 444
>gi|322700630|gb|EFY92384.1| hypothetical protein MAC_01655 [Metarhizium acridum CQMa 102]
Length = 567
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 149/298 (50%), Gaps = 54/298 (18%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEIL 63
G + +E RL+H VVVGGGPTGVEF+GEL DF D+++ + VTLIEA +L
Sbjct: 274 GQTSDEIDRLMHMVVVGGGPTGVEFAGELQDFFEEDIKKLVPEISPRFKVTLIEALPNVL 333
Query: 64 SSFDDRLRHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGTE----VPYGLLVWS 114
SF +L Y L + + +V+ + ++ DG + +PYGLLVW+
Sbjct: 334 PSFSKQLIDYTENTLREEKIDIKTKTMVKRVTNTTVEAEVSRPDGGKERVVIPYGLLVWA 393
Query: 115 TGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVL 168
TG ++K L +P R G ++E+L V +D++A+GDC +GY +
Sbjct: 394 TGNAVRPIIKDLITKIPAQKDSRRGLAVNEYLVVQGTRDIWAIGDCAVAGYAPT------ 447
Query: 169 PALAQVAERQGKYLFSLLNRIGKA-----------------GGGRANSAKDME------- 204
AQVA ++G +L L N + K G A +A+++E
Sbjct: 448 ---AQVASQEGNFLGRLFNNMAKTEKHESRIQELSSKMNLQAGNSAEAAQEIESLEKQLR 504
Query: 205 -LGD--PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVS 259
+ D PF Y H GS+A IG KA+ D+ + + L+ G +++L WRSAYL+ S
Sbjct: 505 RIKDIKPFRYSHQGSLAYIGSEKAVADV--SWWNGNLATGGRMTYLFWRSAYLSMCFS 560
>gi|238498176|ref|XP_002380323.1| alternative NADH-dehydrogenase [Aspergillus flavus NRRL3357]
gi|220693597|gb|EED49942.1| alternative NADH-dehydrogenase [Aspergillus flavus NRRL3357]
Length = 556
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 152/297 (51%), Gaps = 54/297 (18%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSS 65
+E+E RLLH VVVGGGPTGVEF+GE+ DF D+++ +K+ VTL+EA +L
Sbjct: 268 TEDEIKRLLHMVVVGGGPTGVEFAGEIQDFFEEDLKKWVPEIKENFKVTLVEALPNVLPM 327
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTE----VPYGLLVWSTG 116
F +L Y + + + + + +VK+V + ++ DGT+ +PYGLLVW+TG
Sbjct: 328 FSKQLIDYTESTFKEEAITIRTKTMVKNVTDKYIEAEVTKPDGTKELETIPYGLLVWATG 387
Query: 117 VGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
+V+ L LP R G ++E+L V ++V+AVGDC+ T A
Sbjct: 388 NAVRPVVRDLMSQLPAQKNSRRGLAVNEYLVVNGAENVWAVGDCA-------ITNYAPTA 440
Query: 173 QVAERQGKYLFSLLNRIGKA------------GGGRANSAKD------------------ 202
QVA ++G +L L N + K +A S ++
Sbjct: 441 QVASQEGAFLARLFNTMAKTEAIENDLKQLSEAQAQAKSPEERNQIFDEIRERQKQLRRT 500
Query: 203 MELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVS 259
++G PF Y H GS+A IG+ +A+ D+ + S ++ G +++L WRSAYL+ S
Sbjct: 501 KQIG-PFQYSHQGSLAYIGKERAVADI--SWLSGNIASGGTMTYLFWRSAYLSMCFS 554
>gi|116623067|ref|YP_825223.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Candidatus Solibacter usitatus Ellin6076]
gi|116226229|gb|ABJ84938.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Candidatus Solibacter usitatus Ellin6076]
Length = 428
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 139/279 (49%), Gaps = 33/279 (11%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFD 67
E+ L+ V+VGGGPTGVE +G L + +R + H+ H+ L+E +L SF
Sbjct: 156 ERRAWLNFVIVGGGPTGVELAGALGEIANDTLRHDFRHIDPRESHIVLVEGEPRVLPSFP 215
Query: 68 DRLRHYATTQLSKSGVRLVRGI--VKDVDSQKLILNDGTE---VPYGLLVWSTGVGPSTL 122
L A QL + GV L R V +D+ + + G + + ++W+ GV S L
Sbjct: 216 PDLSAKAENQLIQLGV-LTRTAARVTAIDAGGVTVKTGEKEERIETHTVLWAAGVRASRL 274
Query: 123 VKSL------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
K L L ++ GR+ ++ L VP ++F +GD + Y GK LP +A VA
Sbjct: 275 GKVLAERAGAQLDRA--GRVIVEPDLSVPGHPEIFVIGDLASYTPDGGKP-LPGVAPVAM 331
Query: 177 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
++G+Y+ L+ R +GG + PF Y + G++AT+GR KA+ + +
Sbjct: 332 QEGRYVARLI-RARVSGGAKPG---------PFHYFNKGNLATVGRNKAVAEFGK----- 376
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
L +AGFL+W W +L +V + NR V + W ++
Sbjct: 377 -LHIAGFLAWFTWVFVHLMYLVEFENRVLVLMEWVHNYI 414
>gi|367009724|ref|XP_003679363.1| hypothetical protein TDEL_0B00230 [Torulaspora delbrueckii]
gi|359747021|emb|CCE90152.1| hypothetical protein TDEL_0B00230 [Torulaspora delbrueckii]
Length = 524
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 154/295 (52%), Gaps = 31/295 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSF 66
+ E+ RLL VVVGGGPTGVE +GEL D++ +D+++ + + + + L+EA I L+ F
Sbjct: 233 DPERKRLLSIVVVGGGPTGVEAAGELQDYVHQDLKKFLPSLAEEVQIHLVEALPIVLNMF 292
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLVWSTGV 117
D +L YA L+ S ++L +R V V++++L+ E +PYG L+W+TG
Sbjct: 293 DKKLSSYAQKVLTDSSLKLHLRTAVGKVEAEQLVAKTKHEDGSVTEETIPYGTLIWATGN 352
Query: 118 GPSTLVKSL--DLPK--SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
+V L +P+ S + ++++L V ++FA+GD + LP AQ
Sbjct: 353 KARPIVTDLFKKIPEQNSCTRALTVNQFLHVKGSNNIFAIGDNAF-------AGLPPTAQ 405
Query: 174 VAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDP---------FVYRHLGSMATIGRYK 224
VA +Q +YL +++ + G + E D F Y H G++A +G K
Sbjct: 406 VAHQQAEYLAKSFDKMAQLPGFHEKIVQRKEKVDVLFEENGFKGFNYIHYGALAYLGAEK 465
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
A+ ++ K S + G +++ +WR YL+ ++S R+RF V +W F RD
Sbjct: 466 AIANITYGKRSL-YTGGGLITFYIWRVLYLSMILSARSRFKVITDWIKLAFFKRD 519
>gi|162448593|ref|YP_001610960.1| NADH dehydrogenase [Sorangium cellulosum So ce56]
gi|161159175|emb|CAN90480.1| NADH dehydrogenase [Sorangium cellulosum So ce56]
Length = 447
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 144/286 (50%), Gaps = 36/286 (12%)
Query: 2 FLAGISEEE---KSRLLHCVVVGGGPTGVEFSG---ELSDFIM-RDVRQRYSHVKDYIHV 54
F A EE+ + RLL VV+GGG TGVE +G EL+ +I+ RD R S V
Sbjct: 144 FEAAEREEDPAARRRLLTFVVIGGGATGVEMAGAFAELARYILARDFR---SLDPSLSRV 200
Query: 55 TLIE-ANEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLV 112
L+E IL +F + L A QL+ GV +++G + +D Q ++ DG +P ++
Sbjct: 201 LLVEIGARILQAFPESLSASAEEQLTSLGVEVIKGRRFRSIDEQGVLFEDGERLPAATVI 260
Query: 113 WSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
W+ GV + L ++L + GR+ + +P +VFA+GD + + G V P L+
Sbjct: 261 WAAGVRGTPLARALGVELDRVGRVKVGPDCSLPGHPNVFAIGDMATLRDRNGVDV-PGLS 319
Query: 173 QVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDL 229
A ++G+++ + D+E G P F Y G+MATIGR +A+ +
Sbjct: 320 PAAIQEGRFVARCI-------------LDDLE-GRPRGQFAYLDKGTMATIGRSRAIAKV 365
Query: 230 RQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+ L ++G L+WL W + ++ ++ +RNRF V W ++
Sbjct: 366 GR------LQMSGTLAWLAWLAVHVLFLIGFRNRFTVMFAWMWQYI 405
>gi|237785471|ref|YP_002906176.1| NADH dehydrogenase [Corynebacterium kroppenstedtii DSM 44385]
gi|237758383|gb|ACR17633.1| NADH dehydrogenase [Corynebacterium kroppenstedtii DSM 44385]
Length = 478
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 134/275 (48%), Gaps = 32/275 (11%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSS 65
+ E+ RLL +VG GPTGVE +G++++ R + YS+ D + L A ++L
Sbjct: 167 QRERDRLLTFAIVGAGPTGVELAGQVAEMANRTLTGEYSNFDPADARIILLDGAPQVLPP 226
Query: 66 FDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLI---LNDGTE--VPYGLLVWSTGVGP 119
F RL A QL + GV ++ G IV V+ + L L G E + +WS GV
Sbjct: 227 FGKRLGRKAANQLRRMGVEIILGSIVTAVNKRGLTYKNLESGEETTIEASCKIWSAGVAA 286
Query: 120 STL----VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
S L K + GR+ ++ L V + +DVF VGD + S K LP +AQVA
Sbjct: 287 SPLGAIIAKQSGVEVDRAGRVPVNADLTVGNHRDVFVVGD----MMSLNK--LPGVAQVA 340
Query: 176 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 235
+ GKY +I + GR+ E F Y GSMAT+ R++A+V L +
Sbjct: 341 IQGGKY---AAEQIAQEARGRS-----YEERPDFEYFDKGSMATVSRFQAVVKLDK---- 388
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+ AGF W+ W +L +V +RNR V+W
Sbjct: 389 --VEFAGFFGWVTWLLVHLAFIVGFRNRLVSMVSW 421
>gi|258570033|ref|XP_002543820.1| hypothetical protein UREG_03337 [Uncinocarpus reesii 1704]
gi|237904090|gb|EEP78491.1| hypothetical protein UREG_03337 [Uncinocarpus reesii 1704]
Length = 550
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 146/297 (49%), Gaps = 36/297 (12%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA------- 59
+ EE RLLH VVVGGGPTGVEF+GEL DF D+++ +KD HVTL+EA
Sbjct: 268 TPEEVKRLLHMVVVGGGPTGVEFAGELQDFFNEDLKKWVPDIKDNFHVTLVEALPNVQLP 327
Query: 60 --NEILSSFDDRLRHYATTQLS-KSGVR-----LVRGIVKDVDSQKLILNDGTEVPYGLL 111
+L + R Y + +S R L R +K + PYGLL
Sbjct: 328 CSPHVLQAAHRLHRIYFQRRSPLRSAPRPWSRMLQRNTLKPKFRTPMAPRKLKRFPYGLL 387
Query: 112 VWSTGVGPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTV 167
VW+TG +VK L +P R + ++E+L V ++++ VGDC+ T
Sbjct: 388 VWATGNAVRPVVKDLISQIPAQKNSRRGLAVNEYLVVNGTENIWGVGDCA-------ITN 440
Query: 168 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPF--VYRHLGSMATIGRYKA 225
AQVA ++G +L L N + K + K P V+R T G+ +A
Sbjct: 441 YAPTAQVASQEGAFLARLFNTMAKTEAIEKDLKKLSIAHTPTRAVWR------TSGKERA 494
Query: 226 LVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
+ D+ + S ++ G L++L WRSAYL+ S RNR VA +W +FGRD+SR
Sbjct: 495 VADI--SWLSGNIASGGTLTYLFWRSAYLSMCFSTRNRVLVAFDWIKAKLFGRDVSR 549
>gi|72160836|ref|YP_288493.1| NADH dehydrogenase [Thermobifida fusca YX]
gi|71914568|gb|AAZ54470.1| NADH dehydrogenase [Thermobifida fusca YX]
Length = 458
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 134/277 (48%), Gaps = 23/277 (8%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSFDD 68
+ + L+ V VGGG G E EL D + RD + Y + D +H LIEA + IL
Sbjct: 174 RRKALNFVFVGGGFAGAEAIAELED-LARDATRIYPSISIDDLHFYLIEAADRILPEVGP 232
Query: 69 RLRHYATTQLSKSG--VRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
+ A QL G VRL + VD Q++ L+DGTE G LVW+ GV PS +V++
Sbjct: 233 EVGAKALQQLRNRGIDVRLSTFLESAVD-QRIKLSDGTEFEAGTLVWTAGVKPSPVVQAS 291
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
DLP P G + E+L V V++ FA GD + + G P AQ A RQ L
Sbjct: 292 DLPLGPKGHVDTTEYLTVRGVENAFAGGDNAQVPDGNGG-YYPPNAQNAVRQAPVLAD-- 348
Query: 187 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
N I G K+++ P+ +++LG++A +G YK + + L G +W
Sbjct: 349 NIIATLRG------KELK---PYRHKNLGAVAGLGMYKGAAQV-----FGAVKLTGLPAW 394
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L RS +L V ++ + V +W F RD + I
Sbjct: 395 LAHRSYHLLAVPTFNRKMRVLADWTLGFFLRRDFASI 431
>gi|269793685|ref|YP_003313140.1| NADH dehydrogenase, FAD-containing subunit [Sanguibacter keddieii
DSM 10542]
gi|269095870|gb|ACZ20306.1| NADH dehydrogenase, FAD-containing subunit [Sanguibacter keddieii
DSM 10542]
Length = 432
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 126/265 (47%), Gaps = 24/265 (9%)
Query: 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSFDDRLRH 72
L +VVGGG TGVE +G L++ +R Y + D V +++ E+L +F RLR
Sbjct: 158 LRIIVVGGGATGVEVAGALAELRTAGLRPAYPEIHGDAFEVKIVQRGTELLKAFPQRLRD 217
Query: 73 YATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 131
Y +L + GV L G V +V + ++L DGT++ L +WSTGV P V + DLP+
Sbjct: 218 YTADELRRRGVALHLGAGVAEVHTDGVLLTDGTKLRSDLTIWSTGVRPHEEVDAWDLPRG 277
Query: 132 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191
G R+ + L+VP VF VGD + + + PA+ Q ++ K + +L+
Sbjct: 278 EGDRVAVGRDLQVPGRPGVFVVGDLAITPDGLPQLAQPAI-QSGKQAAKNVLALVE---- 332
Query: 192 AGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRS 251
GR + P Y G+MA IGR A+ D+ + L +WL W
Sbjct: 333 ---GRQTT--------PLRYFDKGTMAVIGRRAAIADIVGK-----VQLTRGSAWLAWLF 376
Query: 252 AYLTRVVSWRNRFYVAVNWATTFVF 276
++ ++ RNR T + F
Sbjct: 377 VHIMGLIGPRNRLTTLAGLVTRYGF 401
>gi|254580605|ref|XP_002496288.1| ZYRO0C14960p [Zygosaccharomyces rouxii]
gi|238939179|emb|CAR27355.1| ZYRO0C14960p [Zygosaccharomyces rouxii]
Length = 507
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 154/297 (51%), Gaps = 33/297 (11%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSF 66
+ E+ RLL VVVGGGPTGVE +GEL D++ +D+++ ++ + + + L+EA +L+ F
Sbjct: 216 DPERKRLLSIVVVGGGPTGVETAGELQDYVSQDLKKFLPNLAEEVQIHLVEALPVVLNMF 275
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLIL----NDGT----EVPYGLLVWSTGV 117
+ +L YA L + ++L +R V V+ LI DGT +PYG L+W+TG
Sbjct: 276 EKKLSSYARDVLQGTSIKLHLRSAVSQVEPDHLIAKTKHEDGTVTEANIPYGTLIWATGN 335
Query: 118 GPSTLVKSLDLPKSPGGR-----IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALA 172
++ L K P + ++ +L+V +++FA+GD + LP A
Sbjct: 336 KARPIITDL-FKKIPEQNQCTKALSVNPFLQVKGSKNIFAIGD-------NAFSGLPPTA 387
Query: 173 QVAERQGKYLFSLLNRIGKAGG-----GRANSAKDMELG----DPFVYRHLGSMATIGRY 223
QVA +Q +YL + +++ G+A D+ PF Y H G++A +G
Sbjct: 388 QVAHQQAEYLAKVFDKMANLPNFHEELGQATEKFDLLFERSSFKPFSYIHYGALAYLGAE 447
Query: 224 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
KA+ ++ K S + G +++ +WR YL+ ++S R+R+ V +W F RD
Sbjct: 448 KAIANITYGKRS-FYTGGGVMTFYIWRLLYLSMIMSARSRYKVIADWIKLAFFKRDF 503
>gi|325106638|ref|YP_004267706.1| NADH dehydrogenase (ubiquinone) [Planctomyces brasiliensis DSM
5305]
gi|324966906|gb|ADY57684.1| NADH dehydrogenase (ubiquinone) [Planctomyces brasiliensis DSM
5305]
Length = 442
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 142/295 (48%), Gaps = 28/295 (9%)
Query: 2 FLAGISEE---EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLI 57
F A SEE +S L V+VGGGPTGVE SG LS+ ++ + +K + + L+
Sbjct: 141 FEAAESEEYSDRRSAWLTFVIVGGGPTGVELSGALSEISHHMMKHDFRRIKPEDTRIILV 200
Query: 58 EANE-ILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTE---VPYGLLV 112
E + +LS + + L A L K V + G +V + ++ + G + + ++
Sbjct: 201 EGGQHVLSMYPESLCERARRDLEKLSVEVRTGCMVTSITPTQVTMKCGDQEETIDTRTVI 260
Query: 113 WSTGVGPSTLVKSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVL 168
W GV STL + L + GR+ + L + ++F +GD + + G+ L
Sbjct: 261 WGAGVAASTLGRKLAEATEAETDRVGRVVVQPDLSLTGYPEIFVIGDLAHCKDEEGRP-L 319
Query: 169 PALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVD 228
P LA VA +QG+Y+ L++R + K E +PF YR GSMA IGRY A+
Sbjct: 320 PGLAPVAMQQGEYVAKLVSRRIR--------KKQTETPEPFRYRDRGSMAVIGRYSAIAK 371
Query: 229 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ K L+G +W +W +L + +RNR V + W T++ +R+
Sbjct: 372 VGNWK------LSGLTAWFLWLFLHLMEITQFRNRLLVLMQWGWTYMTHDRAARL 420
>gi|386740344|ref|YP_006213524.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis 31]
gi|384477038|gb|AFH90834.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis 31]
Length = 452
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 133/273 (48%), Gaps = 32/273 (11%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIE-ANEILSSFD 67
E+ RLL V+VG GPTGVE +G+L++ R + Y+ + LI+ A +IL F
Sbjct: 164 ERDRLLTFVIVGAGPTGVELAGQLAEMAHRTLAGEYTRFNPANAKIILIDGAPQILPPFG 223
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLL-----VWSTGVGPST 121
RL A +L K GV + + IV D+D + T+ + +WS GV S
Sbjct: 224 KRLGRNAQRELEKIGVTVKLNAIVTDLDEDSVTYKSTTDNSTHTINSFCKIWSAGVAASP 283
Query: 122 LVK----SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
L K L++ GR+ ++ L V S ++VFA+GD LP +AQ A +
Sbjct: 284 LGKVLADQLEVEVDRAGRVPVNPDLSVGSDKNVFAIGDMMSL------NNLPGVAQTAIQ 337
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
G Y + +I GR SA + E PF Y GSMAT+ R+ A+V L +
Sbjct: 338 GGAY---VAEQIAAEVEGR--SADERE---PFEYYDKGSMATVSRFNAVVKLGK------ 383
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+ + GF+ W +W +L +V +RNR A +W
Sbjct: 384 VEVTGFIGWAMWLCVHLMFLVGFRNRATAAFSW 416
>gi|348176860|ref|ZP_08883754.1| NADH dehydrogenase [Saccharopolyspora spinosa NRRL 18395]
Length = 440
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 142/284 (50%), Gaps = 34/284 (11%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSF 66
E ++RLL VGGG GVE EL D + R + Y +VK D + L+EA ++
Sbjct: 160 ELRNRLLTFTFVGGGFAGVEALAELED-MARYAARYYDNVKPDDMSWALVEAAGRVMPEV 218
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
+++ Y L + G+R+ + +K V+ +L+DGTE LVW+ GV + ++K+
Sbjct: 219 SEKMGVYVVKALEERGIRVYLNTFLKSVEGGHAVLSDGTEFDTDTLVWNAGVKANPVLKN 278
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDC------SGYLESTGKTVLPALAQVAERQG 179
DLP GR+ L+V + V+A GDC S E+ G T P+ AQ A RQ
Sbjct: 279 TDLPLDERGRVKATAHLQVEGLPGVWAAGDCAAVPDLSKTEENPGATCAPS-AQHAVRQA 337
Query: 180 KYLF-SLLNRIGKAGGGRANSAKDMELGDPFVYRH--LGSMATIGRYKALVDLRQNKESK 236
L +LL + R S K+ YRH GS+A +G YK + D+
Sbjct: 338 NQLAKNLLAAL------RGKSTKE--------YRHAYAGSVAGMGLYKGVADVY------ 377
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
G GF++W + RS +++R+ ++ + + ++W F+F R++
Sbjct: 378 GFKAKGFIAWFMHRSYHVSRMPTFNRKLRIIIDWTLAFLFKREV 421
>gi|153010802|ref|YP_001372016.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Ochrobactrum anthropi ATCC 49188]
gi|404317738|ref|ZP_10965671.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Ochrobactrum anthropi CTS-325]
gi|151562690|gb|ABS16187.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Ochrobactrum anthropi ATCC 49188]
Length = 422
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 146/280 (52%), Gaps = 23/280 (8%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSS 65
E ++ LL +VGGGPTGVE +G +++ + + + ++ V L+EA IL++
Sbjct: 153 EAKRQALLTFAIVGGGPTGVELAGIIAELAKQTIWPEFRNIDTRQTRVMLLEAGPRILAA 212
Query: 66 FDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
F + L YA L K GV + GI VKD+ ++ + + + +P +W+ GV S
Sbjct: 213 FPEDLSSYALKALEKLGVEVRLGIPVKDITAEGVTVGEEF-IPCRTAIWAAGVAASPAAT 271
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
L+ GR+ + L VP +D+F +GD + GK V P +A A++QG Y+
Sbjct: 272 WLNAESDRAGRVKVLSNLNVPGHEDIFVIGDTAWVEGPDGKPV-PGIAPAAKQQGAYVAK 330
Query: 185 LL-NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
++ +RI K + PF Y+H G++ATIGR A+VD+ + K L G
Sbjct: 331 VIKSRI---------EGKTPPM--PFRYKHQGNLATIGRGAAVVDMGRFK------LKGL 373
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
++W W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 374 IAWWFWGIAHIFFLIGTRSRAAVAWSWLWTYISGQHSARL 413
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 15/114 (13%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRD--VRQRYSHVKD----YIHVTLIEANEILS 64
+ R H VVVG G G++ +L + +R + QR H+ + T++ +EI
Sbjct: 3 EKRAPHLVVVGAGFGGLQLIHDLRNVDVRITLIDQRNHHLFQPLLYQVATTILATSEIAW 62
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQ--KLILNDGTEVPYGLLVWSTG 116
+RH + V + G V DVD++ +++L +GTE+ Y +LV +TG
Sbjct: 63 P----IRHLFK---DRKEVTTLLGTVTDVDTEHRQVLLENGTEISYDMLVLATG 109
>gi|395237438|ref|ZP_10415511.1| NADH dehydrogenase [Turicella otitidis ATCC 51513]
gi|423350674|ref|ZP_17328326.1| hypothetical protein HMPREF9719_00621 [Turicella otitidis ATCC
51513]
gi|394487295|emb|CCI83599.1| NADH dehydrogenase [Turicella otitidis ATCC 51513]
gi|404387275|gb|EJZ82396.1| hypothetical protein HMPREF9719_00621 [Turicella otitidis ATCC
51513]
Length = 457
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 140/281 (49%), Gaps = 32/281 (11%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSF 66
EE+ +LL+ V++G GPTGVE +G+LS+ R + + ++ D + + L++ A ++L F
Sbjct: 160 EERQKLLNFVIIGAGPTGVELAGQLSEMAHRTLSGEFRNINPDNVKIYLLDGAPQVLPPF 219
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLI--LNDGTEVPYG--LLVWSTGVGPST 121
+L A L K G+ + + +V +VD+ + DG EV VWS GV S+
Sbjct: 220 GKKLGRKAQRMLEKLGIEVRLNAMVSNVDATSVSYKTKDGDEVTLESYAKVWSAGVSASS 279
Query: 122 L----VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
L + + + GG+I ++E L V +VF VGD + LP +AQVA +
Sbjct: 280 LGARIAEQVGIDPDRGGKIPVNEDLTVGDKDNVFIVGDV------MSRDKLPGVAQVAIQ 333
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
G Y +I K G KD E PF Y GSMA I R+KA+ + ++
Sbjct: 334 SGVY---AAQQIAKRAEGE--DPKDRE---PFSYYDKGSMAIISRFKAVAKIGDSE---- 381
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
LAG + W +W +L + R+RF V+W + +F R
Sbjct: 382 --LAGLVPWFMWLGVHLWYMSGRRSRFNALVSWVSN-IFSR 419
>gi|126173313|ref|YP_001049462.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Shewanella baltica OS155]
gi|386340074|ref|YP_006036440.1| NADH dehydrogenase [Shewanella baltica OS117]
gi|125996518|gb|ABN60593.1| NADH dehydrogenase [Shewanella baltica OS155]
gi|334862475|gb|AEH12946.1| NADH dehydrogenase [Shewanella baltica OS117]
Length = 429
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 127/240 (52%), Gaps = 18/240 (7%)
Query: 19 VVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDRLRHYATT 76
+VG G TGVE + EL I Y ++ K ++ V LIEA+ +IL +++ A +
Sbjct: 170 IVGAGATGVELAAELHHVIESVKEYGYLNISKHHLDVHLIEASPKILPQLPEKVSARAQS 229
Query: 77 QLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGV-GPSTLVKSLDLPKSPGG 134
L K G++L G+ VK+V Q + DG + L VW+ GV GP+ K LP +P
Sbjct: 230 VLDKIGIKLHLGVQVKEVTVQGFVTPDGDVIEASLKVWAAGVKGPAVCAKFTSLPITPRN 289
Query: 135 RIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF-SLLNRIGKAG 193
+I +D +RV +D++A+GDC+ + GK V P AQ A++ L+ +++NR+
Sbjct: 290 QIDVDACMRVKGQEDIYAIGDCAALILENGKAV-PPRAQSADQMADRLYKNIVNRLQDKA 348
Query: 194 GGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAY 253
EL PFVY+ GS+ ++ R+ A+ +L N S + G ++ L++ S Y
Sbjct: 349 ----------EL--PFVYKDYGSLVSLSRFSAVGNLMGNLRSGDFFIEGHVARLMYVSLY 396
>gi|110597019|ref|ZP_01385308.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Chlorobium ferrooxidans DSM 13031]
gi|110341210|gb|EAT59675.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Chlorobium ferrooxidans DSM 13031]
Length = 431
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 139/276 (50%), Gaps = 29/276 (10%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFD 67
E+ +LL ++VGGGPTGVE +G + + + + Y ++ + + ++EA IL SF
Sbjct: 151 ERKKLLTFIIVGGGPTGVELAGSIGEMSRYTLSKFYRNIDPKLTRIFIVEAAPRILGSFS 210
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
L AT L K GV++ +V +VD + + + + ++W+ GV + + K++
Sbjct: 211 PDLASKATRSLEKLGVQVWTNSMVSNVDENGVQIGN-ERIEAATVLWAAGVTATGIGKTM 269
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
D+ GRI +DE L +P ++F GD + + G+T LP LA VA +QG+
Sbjct: 270 DVDTDRIGRIIVDEDLSIPQHPEIFVGGDLANFQLEDGRT-LPGLAPVALQQGR------ 322
Query: 187 NRIGKAGGGRANSAKDME--LGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
IGK N D++ F YR G MATIG+ KA+V E L G L
Sbjct: 323 -AIGK------NILLDLKGRTRKLFRYRDKGQMATIGKNKAIV------EFGSLKFDGIL 369
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWA---TTFVFG 277
+W W ++ + S+R+R +V + W TF +G
Sbjct: 370 AWFTWLLVHIYFLTSFRHRVFVLLQWGWSYFTFSYG 405
>gi|160888264|ref|ZP_02069267.1| hypothetical protein BACUNI_00674 [Bacteroides uniformis ATCC 8492]
gi|270296784|ref|ZP_06202983.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|156862210|gb|EDO55641.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides uniformis
ATCC 8492]
gi|270272771|gb|EFA18634.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 428
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 136/271 (50%), Gaps = 20/271 (7%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILS 64
++E++ RL+ +VGGG TG+E +G L++ + Q Y + + + + L++ ++ +LS
Sbjct: 158 NKEDRRRLMTFAIVGGGATGIELAGALAEMRKFVLPQDYPDLNINEMRIILLDGSSRLLS 217
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+F + L K V + + V ++ +L LNDGT + + W GV ++L
Sbjct: 218 AFSEESSKEVADYLKKRDVEIKLNQRVMGYENYQLALNDGTAIDTKNVFWVAGVKANSLQ 277
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
PG R+ +D + R+ ++FA+GD + + P + Q A +Q + L
Sbjct: 278 GLPADAYGPGNRLKVDTYNRLSQYPNIFAIGDTALMISEEYPKGHPQVVQPAIQQARNLI 337
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
L R A + ++ PF+Y++ GSMATIGR A+V+L K L GF
Sbjct: 338 RNLQR--------AETGLPLQ---PFIYQNKGSMATIGRNHAVVEL------KKLRFGGF 380
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
+W VW +L +V +NR ++ V+W ++
Sbjct: 381 PAWAVWLFIHLMSIVGVKNRLFIFVDWMWSY 411
>gi|336173817|ref|YP_004580955.1| NADH dehydrogenase (ubiquinone) [Lacinutrix sp. 5H-3-7-4]
gi|334728389|gb|AEH02527.1| NADH dehydrogenase (ubiquinone) [Lacinutrix sp. 5H-3-7-4]
Length = 427
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 138/277 (49%), Gaps = 24/277 (8%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEA-NEILSSF 66
E++ L++ V+VG GPTGVE +G L++ + + Y + + + LI++ ++IL +
Sbjct: 155 NERNALMNFVIVGAGPTGVELAGALAEIKKGILPKDYPDLDTRLAQINLIQSGDKILKTM 214
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
+ A L GV + + I V D + + N +VW+ GV +T +K
Sbjct: 215 SAKASKKAEDFLENLGVHVWKNIRVTGYDGKTVTTNSDLTFDAATVVWAAGVKGAT-IKG 273
Query: 126 LDLPK--SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
LD + + G RI ++E+ +V +VFA+GD + T P +AQ A +QGK L
Sbjct: 274 LDAEQFVTRGNRIIVNEFNQVKGCDNVFAIGDVAQMETETVPFGHPMMAQPAIQQGKLL- 332
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
+ ++K M PFVY GSMATIGR KA+VDL + K G
Sbjct: 333 -------GENLLKLLASKPMT---PFVYNDKGSMATIGRNKAVVDLPKFK------FQGV 376
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRD 279
+W VW +L ++ +RNR V +NW ++ F R+
Sbjct: 377 FAWFVWMFVHLFFLIGFRNRMVVFINWVYNYIRFDRE 413
>gi|440747656|ref|ZP_20926912.1| NADH dehydrogenase [Mariniradius saccharolyticus AK6]
gi|436483832|gb|ELP39860.1| NADH dehydrogenase [Mariniradius saccharolyticus AK6]
Length = 417
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 138/276 (50%), Gaps = 34/276 (12%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSFD 67
E+ +++ V+VGGG TGVE +G +++ + + Y + + + V LIEA+ +L+
Sbjct: 135 ERKPIMNVVIVGGGATGVELAGSIAELRNNVLPKDYPQLSFENMRVILIEASGSLLNGLT 194
Query: 68 DRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
+ R A L K GV ++ +V+D D + L + + L+W+ G+ ++L+
Sbjct: 195 QKSREKALEYLQKLGVEVMLNTMVEDYDGFVVKLKEKDPIETLTLLWAAGIKANSLIGVE 254
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
+ +P GR+ +DE+ + +D++ +GD +E P +AQVA +Q K
Sbjct: 255 EDQMAPNGRLLVDEFNCLKGEKDIYVLGDQCLQVEEKFPKGHPQVAQVAIQQSK------ 308
Query: 187 NRIGKAGGGRANSAKDMELGD-------PFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
N AK++ LGD PF Y LGSMAT+G+ A+VDL +S
Sbjct: 309 -----------NLAKNL-LGDLKQKPWKPFRYNDLGSMATVGKKMAVVDL------PFVS 350
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
GF +W VW +L ++ +N+ V + WA ++
Sbjct: 351 FQGFFAWFVWLFVHLMAILGVKNKLMVFITWAWKYL 386
>gi|291279463|ref|YP_003496298.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Deferribacter desulfuricans SSM1]
gi|290754165|dbj|BAI80542.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Deferribacter desulfuricans SSM1]
Length = 413
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 141/272 (51%), Gaps = 23/272 (8%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANE-ILS 64
S++E + L +V+GGGPTGVE +G + + + + + ++ + + LIEA + IL
Sbjct: 148 SDQEMKKYLTFIVIGGGPTGVELAGAIGEMTRITLAKDFRNIDPRLSRILLIEAGKRILP 207
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
SFD+ L A L GV++ +V ++ + + + ++ ++W+ G+ ++L
Sbjct: 208 SFDENLTSKAVKDLESLGVQVWTNSLVTEITDDSIKIGN-EQIEAATVIWAAGIKANSLS 266
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
+ K GR+ L + + +VF GD + ++++ LP +A VA +QGK++
Sbjct: 267 SIIPSEKDKMGRVFTANDLSLKNFPEVFVCGDLAHFIQNGEP--LPGIAPVAMQQGKHVA 324
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
+ N K+ + + FVY G +ATIG+ KA+ ++R L L+GF
Sbjct: 325 KQI----------INDLKNKK-REEFVYFDKGQLATIGKSKAIAEIR------NLKLSGF 367
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
L+W+ W ++ + ++NR +V + WA +++
Sbjct: 368 LAWITWIFVHILYLTGFKNRIFVTLQWAWSYI 399
>gi|405355405|ref|ZP_11024631.1| NADH dehydrogenase [Chondromyces apiculatus DSM 436]
gi|397091747|gb|EJJ22549.1| NADH dehydrogenase [Myxococcus sp. (contaminant ex DSM 436)]
Length = 449
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 143/276 (51%), Gaps = 26/276 (9%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSSF 66
E + LL+ V++G GPTGVE +G L++ + + ++ + LIE + +L ++
Sbjct: 144 EIRRSLLNFVIIGAGPTGVELAGSLAEISRHSLPGDFRNIDPKQARIILIEGVDRVLPAY 203
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTE-VPYGLLVWSTGVGPSTLVK 124
D L A L K GV + G V +++ + + + GTE +P ++W+ GV S + +
Sbjct: 204 PDDLSSKALRTLEKLGVEVRTGARVTNINEEGVFI--GTEFIPARTVLWAAGVAASPVAR 261
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
SL + GR+ + L VP +DVF VGD + ++ GK V P LA A ++GK+
Sbjct: 262 SLGVELDRAGRVLVTPELTVPGHEDVFVVGDLASINDADGKPV-PGLAPAAMQEGKHAAH 320
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKAL-VDLRQNKESKGLSLAGF 243
+ R K ME PF Y GS A IGR A+ + R+ K+S GF
Sbjct: 321 NIR--------RRLQGKPME---PFSYWDRGSYAVIGRGHAVGIAFRRFKQS------GF 363
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGR 278
+W+ W ++T ++ +R+R V ++WA +++ FG+
Sbjct: 364 TAWMAWLLIHITFLIGFRSRLAVLLDWAYSYLTFGK 399
>gi|261750197|ref|ZP_05993906.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella suis bv. 5 str. 513]
gi|261739950|gb|EEY27876.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella suis bv. 5 str. 513]
Length = 424
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 143/276 (51%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F +
Sbjct: 156 RQALLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPE 215
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 216 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 274
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 275 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR 333
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 334 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGAIAWW 377
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 378 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 413
>gi|62317654|ref|YP_223507.1| pyridine nucleotide-disulfide oxidoreductase [Brucella abortus bv.
1 str. 9-941]
gi|83269637|ref|YP_418928.1| flavin-containing monooxygenase FMO [Brucella melitensis biovar
Abortus 2308]
gi|260544885|ref|ZP_05820706.1| NADH dehydrogenase [Brucella abortus NCTC 8038]
gi|260756750|ref|ZP_05869098.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 6 str. 870]
gi|260760180|ref|ZP_05872528.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 4 str. 292]
gi|260763418|ref|ZP_05875750.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 2 str. 86/8/59]
gi|260882565|ref|ZP_05894179.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 9 str. C68]
gi|423168450|ref|ZP_17155152.1| hypothetical protein M17_02139 [Brucella abortus bv. 1 str. NI435a]
gi|423172115|ref|ZP_17158789.1| hypothetical protein M19_02647 [Brucella abortus bv. 1 str. NI474]
gi|423174154|ref|ZP_17160824.1| hypothetical protein M1A_01551 [Brucella abortus bv. 1 str. NI486]
gi|423176030|ref|ZP_17162696.1| hypothetical protein M1E_00292 [Brucella abortus bv. 1 str. NI488]
gi|423181544|ref|ZP_17168184.1| hypothetical protein M1G_02643 [Brucella abortus bv. 1 str. NI010]
gi|423184677|ref|ZP_17171313.1| hypothetical protein M1I_02645 [Brucella abortus bv. 1 str. NI016]
gi|423187829|ref|ZP_17174442.1| hypothetical protein M1K_02646 [Brucella abortus bv. 1 str. NI021]
gi|423190248|ref|ZP_17176857.1| hypothetical protein M1M_01929 [Brucella abortus bv. 1 str. NI259]
gi|62197847|gb|AAX76146.1| pyridine nucleotide-disulphide oxidoreductase family protein
[Brucella abortus bv. 1 str. 9-941]
gi|82939911|emb|CAJ12924.1| Flavin-containing monooxygenase FMO:Pyridine nucleotide-disulphide
oxidoreductase, class I:FAD-dependent pyridine
nucleotide- [Brucella melitensis biovar Abortus 2308]
gi|260098156|gb|EEW82030.1| NADH dehydrogenase [Brucella abortus NCTC 8038]
gi|260670498|gb|EEX57438.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 4 str. 292]
gi|260673839|gb|EEX60660.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 2 str. 86/8/59]
gi|260676858|gb|EEX63679.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 6 str. 870]
gi|260872093|gb|EEX79162.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella abortus bv. 9 str. C68]
gi|374536537|gb|EHR08057.1| hypothetical protein M19_02647 [Brucella abortus bv. 1 str. NI474]
gi|374538943|gb|EHR10450.1| hypothetical protein M17_02139 [Brucella abortus bv. 1 str. NI435a]
gi|374540155|gb|EHR11657.1| hypothetical protein M1A_01551 [Brucella abortus bv. 1 str. NI486]
gi|374546134|gb|EHR17594.1| hypothetical protein M1G_02643 [Brucella abortus bv. 1 str. NI010]
gi|374546977|gb|EHR18436.1| hypothetical protein M1I_02645 [Brucella abortus bv. 1 str. NI016]
gi|374554009|gb|EHR25422.1| hypothetical protein M1K_02646 [Brucella abortus bv. 1 str. NI021]
gi|374555688|gb|EHR27095.1| hypothetical protein M1E_00292 [Brucella abortus bv. 1 str. NI488]
gi|374556288|gb|EHR27693.1| hypothetical protein M1M_01929 [Brucella abortus bv. 1 str. NI259]
Length = 424
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 143/276 (51%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F +
Sbjct: 156 RQALLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPE 215
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 216 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 274
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 275 AESDRAGRVKVLSNLSVPGHEDIFAIGD-TAWVEGDDGRPVPGIAPAAKQQGAYVAKVIR 333
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 334 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 377
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 378 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 413
>gi|256015261|ref|YP_003105270.1| NADH dehydrogenase [Brucella microti CCM 4915]
gi|376276813|ref|YP_005152874.1| NADH dehydrogenase [Brucella canis HSK A52141]
gi|255997921|gb|ACU49608.1| NADH dehydrogenase [Brucella microti CCM 4915]
gi|363405187|gb|AEW15481.1| NADH dehydrogenase [Brucella canis HSK A52141]
Length = 441
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 143/276 (51%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F +
Sbjct: 173 RQALLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPE 232
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 233 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 291
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 292 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR 350
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 351 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 394
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 395 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 430
>gi|189022903|ref|YP_001932644.1| NADH dehydrogenase [Brucella abortus S19]
gi|237817201|ref|ZP_04596193.1| NADH dehydrogenase [Brucella abortus str. 2308 A]
gi|297249697|ref|ZP_06933398.1| NADH dehydrogenase [Brucella abortus bv. 5 str. B3196]
gi|376271297|ref|YP_005114342.1| NADH dehydrogenase [Brucella abortus A13334]
gi|189021477|gb|ACD74198.1| NADH dehydrogenase [Brucella abortus S19]
gi|237788014|gb|EEP62230.1| NADH dehydrogenase [Brucella abortus str. 2308 A]
gi|297173566|gb|EFH32930.1| NADH dehydrogenase [Brucella abortus bv. 5 str. B3196]
gi|363402469|gb|AEW19438.1| NADH dehydrogenase [Brucella abortus A13334]
Length = 441
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 143/276 (51%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F +
Sbjct: 173 RQALLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPE 232
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 233 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 291
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 292 AESDRAGRVKVLSNLSVPGHEDIFAIGD-TAWVEGDDGRPVPGIAPAAKQQGAYVAKVIR 350
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 351 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 394
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 395 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 430
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 15/121 (12%)
Query: 4 AGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRD--VRQRYSHVKD----YIHVTLI 57
AGI + + + H VVVG G G++ +L +R + QR H+ + T++
Sbjct: 13 AGIFQMDAANSPHIVVVGAGFCGLQLIRDLDGAKVRITLIDQRNHHLFQPLLYQVATTIL 72
Query: 58 EANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQK--LILNDGTEVPYGLLVWST 115
+EI + R ++ V + G V DVD+ + + L +G EV Y +LV +T
Sbjct: 73 STSEIAWPIRNLFR-------DRAEVTTLLGTVIDVDTARKSVFLENGDEVSYDMLVLAT 125
Query: 116 G 116
G
Sbjct: 126 G 126
>gi|148558547|ref|YP_001257453.1| NADH dehydrogenase [Brucella ovis ATCC 25840]
gi|161620545|ref|YP_001594431.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Brucella canis ATCC 23365]
gi|163844642|ref|YP_001622297.1| hypothetical protein BSUIS_B0479 [Brucella suis ATCC 23445]
gi|260568219|ref|ZP_05838688.1| NADH dehydrogenase [Brucella suis bv. 4 str. 40]
gi|261323269|ref|ZP_05962466.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella neotomae 5K33]
gi|261753470|ref|ZP_05997179.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella suis bv. 3 str. 686]
gi|376278449|ref|YP_005108482.1| NADH dehydrogenase [Brucella suis VBI22]
gi|148369832|gb|ABQ62704.1| NADH dehydrogenase [Brucella ovis ATCC 25840]
gi|161337356|gb|ABX63660.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella canis ATCC 23365]
gi|163675365|gb|ABY39475.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|260154884|gb|EEW89965.1| NADH dehydrogenase [Brucella suis bv. 4 str. 40]
gi|261299249|gb|EEY02746.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella neotomae 5K33]
gi|261743223|gb|EEY31149.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella suis bv. 3 str. 686]
gi|358259887|gb|AEU07620.1| NADH dehydrogenase [Brucella suis VBI22]
Length = 424
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 143/276 (51%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F +
Sbjct: 156 RQALLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPE 215
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 216 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 274
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 275 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR 333
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 334 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 377
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 378 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 413
>gi|88802757|ref|ZP_01118284.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Polaribacter irgensii 23-P]
gi|88781615|gb|EAR12793.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Polaribacter irgensii 23-P]
Length = 423
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 138/273 (50%), Gaps = 24/273 (8%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI--HVTLIEAN-EILSSF 66
E+ + L V+ G GPTGVE SG +++ + + Y +K+ + L++ E+LSS
Sbjct: 153 ERKKYLTFVIAGAGPTGVELSGIIAELSSSVIMKDYPELKEEELGEIYLVDGQKEVLSSM 212
Query: 67 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
+ YA +L+ GV L+ VKD D + ++L++G ++ L+W+ GV
Sbjct: 213 SPHAQKYAAKKLTAYGVHLLMDTFVKDFDGESVLLSNGNKIETKNLIWAAGVHAKVFEGF 272
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVL--PALAQVAERQGKYLF 183
G R+ +E+ +V +++A+GDC+ +L+ L P +AQ A +Q K L
Sbjct: 273 HPDSFGHGKRLKTNEFNQVHLSSNIYALGDCA-FLDGDKNYPLGHPQVAQPAIQQAKNLA 331
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
N + G +A F Y+ GS+A IGR KA++D K +++GF
Sbjct: 332 D--NLLKNHGDWKA-----------FEYKDKGSLAIIGRNKAVMDFPNQK----YAMSGF 374
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVF 276
LSWL+W ++ +V+++++ NW +++
Sbjct: 375 LSWLIWIFVHIMGLVNFKSKLRALYNWLGYYIY 407
>gi|390942738|ref|YP_006406499.1| NADH dehydrogenase, FAD-containing subunit [Belliella baltica DSM
15883]
gi|390416166|gb|AFL83744.1| NADH dehydrogenase, FAD-containing subunit [Belliella baltica DSM
15883]
Length = 442
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 136/275 (49%), Gaps = 26/275 (9%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILS 64
E E+ +++ V+VGGGPTGVE +G +++ + Y + + V LIEA +L
Sbjct: 162 KENERKPIMNVVIVGGGPTGVELAGAVAELRNNVFPKDYPELNFKNMKVVLIEAGTHLLL 221
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
S ++ + A T L K GV ++ V D D K+ L + L+W+ G+ + +
Sbjct: 222 SMSEQAKTKARTYLEKLGVIVMTDTQVLDYDGNKVDLKGKESIETKTLLWAAGIKANHIE 281
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
++ P GR+ ++E+ R+ +++FA+GD + + + P +AQVA +Q L
Sbjct: 282 GVIEGQTLPNGRMIVNEFNRLKESENIFALGDIAISITEKFERGHPQVAQVALQQADNL- 340
Query: 184 SLLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGLSL 240
AN+ + P F Y+ LGSMATIGR A+VDL +
Sbjct: 341 -------------ANNLLAEKRNKPWKRFKYKDLGSMATIGRKLAVVDL------PFIKF 381
Query: 241 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
G L+W+ W +L ++ +N+ ++ +NW+ ++
Sbjct: 382 QGLLAWMTWLFVHLMAILGVKNKLFIFLNWSWNYL 416
>gi|361130969|gb|EHL02699.1| putative NADH dehydrogenase [Glarea lozoyensis 74030]
Length = 395
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 139/275 (50%), Gaps = 39/275 (14%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILS 64
SE++K LLH +VGGGPTGVE + E+ + I + Y +KDY+ +++ + A ++L
Sbjct: 134 CSEKQKRDLLHFAIVGGGPTGVELAAEIDELIHGHLSHLYHSLKDYVSISVYDIAPKLLG 193
Query: 65 SFDDRLRHYATTQLSKSGV--RLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
FD+ L YA + ++ V R+ R I I DG EV +G+ +W+TG S L
Sbjct: 194 PFDEELSAYAMEKFNRRNVNTRMGRHIESFQQGSMKIKEDG-EVGFGICIWATGNKASQL 252
Query: 123 VKSLDLPKSPGG--RIGIDEWLRV---PSVQD------------VFAVGDCSGYLESTGK 165
V+ LD+ KS GG RI D+ LRV P+ Q V+A+GD + + S
Sbjct: 253 VEDLDVRKSEGGMKRILTDKHLRVLQTPNKQQKENDEKSDPIPGVYALGDAADIMGSE-- 310
Query: 166 TVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDM-ELGDPFVYRHLGSMATIGRYK 224
LP A+VA ++ K+L L + + S +D+ E + F Y +A IGR+
Sbjct: 311 --LPTTAEVAVQKAKWLAKHLQETSEM----SISTEDVSERSNAFHYEQKPLVAYIGRHD 364
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYL--TRV 257
+V E KG G +WL WRS L TR+
Sbjct: 365 GVV------EGKG-DWTGAGAWLAWRSGNLEWTRI 392
>gi|261217103|ref|ZP_05931384.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella ceti M13/05/1]
gi|261319974|ref|ZP_05959171.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella ceti M644/93/1]
gi|260922192|gb|EEX88760.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella ceti M13/05/1]
gi|261292664|gb|EEX96160.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella ceti M644/93/1]
Length = 424
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 143/276 (51%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F +
Sbjct: 156 RQALLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPE 215
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 216 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 274
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 275 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR 333
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 334 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 377
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 378 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 413
>gi|322711332|gb|EFZ02906.1| hypothetical protein MAA_02488 [Metarhizium anisopliae ARSEF 23]
Length = 569
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 147/298 (49%), Gaps = 54/298 (18%)
Query: 5 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEIL 63
G + +E RL+H VVVGGGPTGVEF+GEL DF D+++ + VTLIEA +L
Sbjct: 276 GQTSDEIDRLMHMVVVGGGPTGVEFAGELQDFFEEDIKKLVPEISPRFKVTLIEALPNVL 335
Query: 64 SSFDDRLRHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGTE----VPYGLLVWS 114
SF +L Y + + +V+ + ++ DG + +PYGLLVW+
Sbjct: 336 PSFSKQLIDYTENTFREEKIDIKTKTMVKRVTDTTVEAEVSRPDGGKERVVIPYGLLVWA 395
Query: 115 TGVGPSTLVKSL--DLPKSPGGRIG--IDEWLRVPSVQDVFAVGDC--SGYLESTGKTVL 168
TG +VK L +P R G ++E+L V +D++A+GDC +GY +
Sbjct: 396 TGNAVRPIVKDLITKIPAQKDSRRGLAVNEYLVVQGTRDIWAIGDCAVAGYAPT------ 449
Query: 169 PALAQVAERQGKYLFSLLNRIGKA-----------------GGGRANSAKDME------- 204
AQVA ++G +L L N + K G A +A ++E
Sbjct: 450 ---AQVASQEGNFLGRLFNNMAKTENHESRIQELSSKMNLQAGNSAEAAHEIESLEKQLR 506
Query: 205 -LGD--PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVS 259
+ D PF Y H GS+A IG KA+ D+ + + L+ G L++L WRSAYL+ S
Sbjct: 507 RIKDIKPFRYSHQGSLAYIGSEKAVADV--SWWNGNLATGGSLTYLFWRSAYLSMCFS 562
>gi|81298912|ref|YP_399120.1| type 2 NADH dehydrogenase [Synechococcus elongatus PCC 7942]
gi|81167793|gb|ABB56133.1| type 2 NADH dehydrogenase [Synechococcus elongatus PCC 7942]
Length = 444
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 137/278 (49%), Gaps = 32/278 (11%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEA-NEILSSF 66
E + L +VG GPTGVE +G +++ ++R+ + +V V LIE + +L F
Sbjct: 154 ERQQAWLTFTIVGAGPTGVELAGAIAELTRGEMRKEFRNVDTTKAKVILIEGMDRVLPPF 213
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGT---EVPYGLLVWSTGVGPSTL 122
L A QL GV + + +V D+ +++ G E+P +W+ GV S L
Sbjct: 214 PPELSAQAQVQLEGLGVTVQTKAMVTDIQEDRVVFKTGDDLHEIPSRTTLWAAGVKASPL 273
Query: 123 VKSL------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
K L +L + GR+ + L++P+ +V+ +GD + + G LP +A VA
Sbjct: 274 GKLLAQRTGAELDRI--GRVIVQPDLQLPTDPNVYVLGDLAHCPDQAGNP-LPGVAAVAM 330
Query: 177 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
+QG YL GKA R S + DPF Y+ GSMA IGR A+ L
Sbjct: 331 QQGAYL-------GKALKRRLKS----QPVDPFRYQDFGSMAVIGRNAAVARL------A 373
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
G+ L+GF +WLVW ++ ++ + ++ V V WA T+
Sbjct: 374 GIRLSGFPAWLVWAFIHVWYLIEFDSKLLVMVQWAWTY 411
>gi|56751412|ref|YP_172113.1| type 2 NADH dehydrogenase [Synechococcus elongatus PCC 6301]
gi|56686371|dbj|BAD79593.1| type 2 NADH dehydrogenase [Synechococcus elongatus PCC 6301]
Length = 444
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 137/278 (49%), Gaps = 32/278 (11%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEA-NEILSSF 66
E + L +VG GPTGVE +G +++ ++R+ + +V V LIE + +L F
Sbjct: 154 ERQQAWLTFTIVGAGPTGVELAGAIAELTRGEMRKEFRNVDTTKAKVILIEGMDRVLPPF 213
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGT---EVPYGLLVWSTGVGPSTL 122
L A QL GV + + +V D+ +++ G E+P +W+ GV S L
Sbjct: 214 PPELSAQAQVQLEGLGVTVQTKAMVTDIQEDRVVFKTGDDLHEIPSRTTLWAAGVKASPL 273
Query: 123 VKSL------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
K L +L + GR+ + L++P+ +V+ +GD + + G LP +A VA
Sbjct: 274 GKLLAQRTGAELDRI--GRVIVQPDLQLPTDPNVYVLGDLAHCPDQAGNP-LPGVAAVAM 330
Query: 177 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
+QG YL GKA R S + DPF Y+ GSMA IGR A+ L
Sbjct: 331 QQGAYL-------GKALKRRLKS----QPVDPFRYQDFGSMAVIGRNAAVARL------A 373
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
G+ L+GF +WLVW ++ ++ + ++ V V WA T+
Sbjct: 374 GIRLSGFPAWLVWAFIHVWYLIEFDSKLLVMVQWAWTY 411
>gi|54026247|ref|YP_120489.1| NADH dehydrogenase [Nocardia farcinica IFM 10152]
gi|54017755|dbj|BAD59125.1| putative NADH dehydrogenase [Nocardia farcinica IFM 10152]
Length = 434
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 133/285 (46%), Gaps = 47/285 (16%)
Query: 4 AGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEI 62
A E + RLL VVVG G TGVE +G+L++ R H + VTL+E A +
Sbjct: 160 ATADEATRQRLLSFVVVGAGATGVEVAGQLTELAKR-------HFHQEVSVTLVEGAGAV 212
Query: 63 LSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILND--GTE--VPYGLLVWSTGV 117
L F L YA L+K GV L+ V D++ K+ + D G E + +VWS GV
Sbjct: 213 LPPFGGGLSEYAKKSLAKGGVEVLLDTFVTDIEPGKVTVKDKAGVERKIAAETVVWSAGV 272
Query: 118 G----PSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS---GYLESTGKTVLPA 170
L ++ + GR+ I+ L V D++A+GD + GY P
Sbjct: 273 QAGGFAEILAEATGVETDRAGRLLINPDLTVGGYADIYAIGDMTSLNGY---------PG 323
Query: 171 LAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLR 230
+ VA ++G++ ++ R + G PFVY GSMA I R+ A+ L
Sbjct: 324 QSPVAMQEGRHAADIIRR-------------KKQPGTPFVYWDKGSMAVISRFSAVAKLN 370
Query: 231 QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
++ ++ G ++W +W + +L +V +RNRF +W F+
Sbjct: 371 EH-----ITFRGVIAWFMWLAVHLFYLVGFRNRFAAVASWLVAFI 410
>gi|258655068|ref|YP_003204224.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Nakamurella multipartita DSM 44233]
gi|258558293|gb|ACV81235.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Nakamurella multipartita DSM 44233]
Length = 464
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 138/281 (49%), Gaps = 36/281 (12%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIE-ANEILSSFD 67
E++ L VV+G GPTGVE +G+L++ + Q Y V + L+E A +L FD
Sbjct: 158 ERAEWLTFVVIGAGPTGVELAGQLAELAHLVLPQEYRTVDTTEARIILLEGAPAVLPPFD 217
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN--DGTE-VPYGLLVWSTGVGPSTLV 123
++L+ Y L K GV + V + D++ + + + +G E + +W+ GV S L
Sbjct: 218 EKLQKYTKAHLEKMGVEIRVNTLATDMNHESITVKGPNGVETIRARTRIWAAGVQASPLA 277
Query: 124 KSL------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
K L +L ++ GR+ ++ +P +VFA+GD + S K LP +AQ A +
Sbjct: 278 KMLAEKTGAELDRA--GRVSVNPDCSLPGHPEVFAIGD----MVSLNK--LPGVAQPAMQ 329
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
+GKY+ L+ R A + PF Y GSMATIG A+ D + G
Sbjct: 330 EGKYVAKLIK-------ARTTGAP---IPPPFKYFDKGSMATIGHKAAVAD------AFG 373
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
GF+++L+W ++ +V W NR NWA + F +
Sbjct: 374 YKFTGFIAYLMWGFIHVAYLVGWGNRLGTLYNWAHSLWFSK 414
>gi|329118101|ref|ZP_08246813.1| pyridine nucleotide-disulfide oxidoreductase [Neisseria
bacilliformis ATCC BAA-1200]
gi|327465761|gb|EGF12034.1| pyridine nucleotide-disulfide oxidoreductase [Neisseria
bacilliformis ATCC BAA-1200]
Length = 423
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 131/277 (47%), Gaps = 26/277 (9%)
Query: 4 AGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQR-YSHVK-DYIHVTLIEANE 61
+ E++ LH VV GGG +GVE +G ++ + RD+ + Y ++ ++ +TL+ A+
Sbjct: 144 CALPPAERAPYLHFVVAGGGASGVELTGIFAE-MRRDIFNKDYPELQGEHSRLTLVTADP 202
Query: 62 IL-SSFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119
+L + Y +L + G ++ V D + L G + L+W+ GV
Sbjct: 203 VLLPPMSASAQRYTAAELHRLGADVICNDRVTGYDGHTVRLESGRSIAAKSLIWTAGVTA 262
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYL-ESTGKTVLPALAQVAERQ 178
D + G R+ D LRV + +V+A+GDC+ +S P L QVA+ Q
Sbjct: 263 RRTDGIPDECYTRGNRLRTDRQLRVIGLDNVYALGDCALVEGDSAYPNGHPQLGQVAKAQ 322
Query: 179 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 238
G YL L R GGG A F Y+H G MA IGR A+ D + S G+
Sbjct: 323 GLYLARALIR----GGGEA-----------FAYKHQGDMAIIGRLSAVADFPGGRSSHGI 367
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
L+W VW + ++ +V++RNR A NW F+
Sbjct: 368 -----LTWAVWVAVHILALVTFRNRLAAAYNWGIAFL 399
>gi|409356695|ref|ZP_11235082.1| NADH dehydrogenase, FAD-containing subunit [Dietzia alimentaria 72]
Length = 457
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 135/263 (51%), Gaps = 19/263 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYS-HVKDYIHVTLIE-ANEILSSFDD 68
+ R VVG GPTGVE +G L++ I V ++YS I+V LI+ ++ +L +F D
Sbjct: 170 EHRPFGVAVVGAGPTGVETAGALAENIRLVVAEQYSPEFAASINVHLIDMSDTVLGAFSD 229
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
+ Y L GV + G V V + + L D T +P G++ W+ G+ + L+
Sbjct: 230 SSQRYTRRSLQDLGVIIHLGTAVSAVTEEGVTLADDTTIPAGIVAWTAGLKATGLLHKAG 289
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
LP GGR+ ++ L VP V+ +GD + +++ G++ LP L VA++ G++ +
Sbjct: 290 LPTGRGGRVDVNTDLTVPDFPGVYVLGDAANIVDAKGRS-LPQLGSVAKQSGQWAADNI- 347
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ AG R PF +R LG MA IGR +A+ ++ + + ++G L++L
Sbjct: 348 QADLAGQPRT----------PFGFRDLGFMAMIGRGRAVAEVTPRR----IQMSGLLAFL 393
Query: 248 VWRSAYLTRVVSWRNRFYVAVNW 270
W + +L + + R V V+W
Sbjct: 394 SWLAVHLMLLSGMQQRAAVLVSW 416
>gi|418407009|ref|ZP_12980327.1| NADH dehydrogenase [Agrobacterium tumefaciens 5A]
gi|358006153|gb|EHJ98477.1| NADH dehydrogenase [Agrobacterium tumefaciens 5A]
Length = 421
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 137/279 (49%), Gaps = 19/279 (6%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILS 64
SEEE+ L V++G GPTGVE +G +++ + + + +V V L+EA +L
Sbjct: 149 SEEERQAQLTFVIIGAGPTGVEMAGMIAELAHKALPPEFRNVDTRKSRVLLVEAGPRVLP 208
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
F D L YA L K GV ++ G + + + T P +VW+ GV S K
Sbjct: 209 VFTDDLSAYAKQALEKLGVEVLLGTPVTACTDEGVTVGETFYPCRTVVWAAGVQASPAAK 268
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
L+ GR + L + ++F +GD + + GK V P +A A++QG ++
Sbjct: 269 WLNAAADRAGRAIVGPHLNLEDDPNIFVIGDTAAVNQENGKPV-PGIAPAAKQQGAHVAK 327
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
++ +A + + E PF Y H G++ATIG+ A++D + K L G L
Sbjct: 328 VI---------KARLSGEPEPA-PFRYSHQGNLATIGKRAAVIDFGRFK------LKGVL 371
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W +W A++ ++ R+R VA +W ++ G+ +R+
Sbjct: 372 AWWIWGLAHIYFLIGTRSRLAVAWSWLWIYLSGQHSARL 410
>gi|337293975|emb|CCB91961.1| putative NADH dehydrogenase [Waddlia chondrophila 2032/99]
Length = 415
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 30/280 (10%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEANE-ILSSF 66
E+ + L V+VGGGPTGVE +G +++ + + + V + + +IE + +L +F
Sbjct: 151 EQIASELRFVIVGGGPTGVEMAGSIAEIARKTLFNNFRRIVPENSEILIIEGTDRLLHTF 210
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
+ L A L + GV++ V ++ + + +N+ +P ++W+ G S L+K+
Sbjct: 211 PEELSKKALEDLQQMGVKVRTHTHVTNITEKGVYINEEF-IPTSNVIWAAGNQASPLLKT 269
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
L++P+ GR ++E L +P +VF +GD + G LP +A VA +QG+Y+
Sbjct: 270 LNVPQDRSGRAIVNEDLSIPGYSNVFVIGDAACAKNREGNP-LPGIAPVAIQQGRYV--- 325
Query: 186 LNRIGKAGGGRANSAKDMELGD--PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
AK +E G+ PF Y G MAT+G KA+ + + G
Sbjct: 326 --------------AKVIETGERPPFHYVDKGVMATVGTSKAVAAIGKR------CFTGL 365
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L+W W ++ ++S+ NR V + W ++ G RI
Sbjct: 366 LAWFAWCFIHIFYLISFPNRLIVMMQWMIMYLGGNRHVRI 405
>gi|298249077|ref|ZP_06972881.1| NADH dehydrogenase (ubiquinone) [Ktedonobacter racemifer DSM 44963]
gi|297547081|gb|EFH80948.1| NADH dehydrogenase (ubiquinone) [Ktedonobacter racemifer DSM 44963]
Length = 459
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 128/277 (46%), Gaps = 21/277 (7%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLI-EANEILSSFD 67
E+ L VV G G TG E + + D+++ + + Y + D + V ++ A IL D
Sbjct: 176 ERQEWLTFVVGGAGDTGAELAAIVHDYLLTGLFRAYPWLADAPVRVVMVGRAERILPMSD 235
Query: 68 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
R H L + G+ ++ G + V+ + ++ + GT +P L W+ G+ +V L
Sbjct: 236 PRTSHLVYRALKREGIEVLTGRSITGVEGRAVLTSSGT-IPARTLFWAAGITAPEVVCHL 294
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
+P + G + +D+ LR+P QDV+ +GDC+ +S K +P AQ A +QG Y
Sbjct: 295 PVPHARNGAVLVDDHLRIPEYQDVYVIGDCAWAYDSITKAPVPPTAQAARQQGAY----- 349
Query: 187 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
+GK + + P+ Y LG +A +G + + L+ G +W
Sbjct: 350 --VGKVLARECTNQPAL----PYRYTPLGHLALLGHETGVAQV------GSLTFGGLPAW 397
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
++W YL R SW R + +W + G + ++
Sbjct: 398 ILWHLVYLLRNPSWTRRIRLVADWLLSGFLGPETGQL 434
>gi|365986501|ref|XP_003670082.1| hypothetical protein NDAI_0E00230 [Naumovozyma dairenensis CBS 421]
gi|343768852|emb|CCD24839.1| hypothetical protein NDAI_0E00230 [Naumovozyma dairenensis CBS 421]
Length = 589
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 154/297 (51%), Gaps = 34/297 (11%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSF 66
+ E+ RLL VVVGGGPTGVE +GEL D++ +D+++ V + + L+EA I L+ F
Sbjct: 297 DPERKRLLSIVVVGGGPTGVETAGELQDYVHQDLQKFLPSVAKEVQIHLVEALPIVLNMF 356
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLIL----NDGT-----EVPYGLLVWSTG 116
+ +L YA L K+ ++L ++ V V+ LI +DG ++PYG L+W+TG
Sbjct: 357 EKKLSSYAQETLEKTSIKLHLKTAVAKVEKDHLIAKTKSDDGKTVIEEKIPYGTLIWATG 416
Query: 117 VGPSTLVKSLDLPK-----SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 171
+V +L PK + ++++L+V ++FA+GD + ++ LP
Sbjct: 417 NKARPIVTNL-FPKITEQNKSTRALSVNKYLQVIGSNNIFAIGD-NAFIG------LPPT 468
Query: 172 AQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD---------PFVYRHLGSMATIGR 222
AQVA +Q +YL +++ + + D PF Y H G++A +G
Sbjct: 469 AQVAHQQAEYLAKNFDKMAQLPNFHEKLQSRKQKFDLLFEENKFKPFKYTHFGALAYLGS 528
Query: 223 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
+A+ ++ K S + G +++ +WR +YL ++S R+RF V +W F RD
Sbjct: 529 ERAIANITYGKRSL-YTGGGLITFYIWRLSYLAMILSARSRFKVITDWLKLAFFKRD 584
>gi|322436833|ref|YP_004219045.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Granulicella tundricola MP5ACTX9]
gi|321164560|gb|ADW70265.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Granulicella tundricola MP5ACTX9]
Length = 463
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 140/272 (51%), Gaps = 19/272 (6%)
Query: 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDRLRH 72
L+ VV+GGGPTGVE +G +SD + + + H+ V ++E + IL+++ D L+
Sbjct: 166 LNFVVIGGGPTGVELAGAISDIAKLYMARDFRHIDPSSAQVMILEGSPHILAAYPDDLQE 225
Query: 73 YATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 131
A QL + GV++ G V DV +++ D + +W+ GV S L K L +
Sbjct: 226 KALEQLRELGVKVRTGARVTDVQPGYVMVED-ERIDSVCTLWAAGVQASPLGKLLGVETD 284
Query: 132 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191
G + +D++L + +VF GD + ++ GK V P +AQ A + G Y RIG
Sbjct: 285 NKGLVMVDQFLNPKGMPEVFVCGDLAHVMQD-GKQV-PGVAQPAMQMGTYA---AKRIGH 339
Query: 192 AGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRS 251
A G A+ F Y G MATIGR A+ +++ KG +GF +W+ W S
Sbjct: 340 AIEGAADKKG-------FRYFDKGDMATIGRSAAVANIKW--PFKG-HWSGFPAWMTWLS 389
Query: 252 AYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
++ ++ +RNRF V WA T+V D +R+
Sbjct: 390 VHIFFLIGFRNRFSVFRQWAWTYVALSDGARL 421
>gi|374578529|ref|ZP_09651625.1| NADH dehydrogenase, FAD-containing subunit [Bradyrhizobium sp.
WSM471]
gi|374426850|gb|EHR06383.1| NADH dehydrogenase, FAD-containing subunit [Bradyrhizobium sp.
WSM471]
Length = 420
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 139/274 (50%), Gaps = 26/274 (9%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFD 67
+++ L V+VG GPTGVE +G +++ + + ++ + V LIEA +L+ F
Sbjct: 154 KRAARLTFVIVGAGPTGVELAGTIAEMAHHTLPADFRNIDTNKARVVLIEAGPRVLAGFP 213
Query: 68 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
D L YA L K GV +V G V +++ + ++ G + +W+ GV S + L
Sbjct: 214 DDLSAYAQASLEKIGVEVVLGQAVTEINREGVVFG-GKLLEAKTRIWAAGVRASPAAEWL 272
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
P GR+ ++ L +P ++FA+GD GK V P +A A++QG+Y+ +
Sbjct: 273 GAPADRAGRVQVENDLTIPGHPEIFAIGDTVLINAWDGKPV-PGIAPAAKQQGRYVAETI 331
Query: 187 N-RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
R+ K G PF Y+H GS+A IG+ A++D + K L G ++
Sbjct: 332 KARLRKEPTG------------PFRYKHSGSLAQIGKRLAVIDFGRIK------LRGTIA 373
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
W +W A++ ++ R+R VA++W +++ RD
Sbjct: 374 WWIWGIAHIYFLIGLRHRLSVALSW--LWIYARD 405
>gi|261215938|ref|ZP_05930219.1| LOW QUALITY PROTEIN: FAD-dependent pyridine nucleotide-disulphide
oxidoreductase [Brucella abortus bv. 3 str. Tulya]
gi|260917545|gb|EEX84406.1| LOW QUALITY PROTEIN: FAD-dependent pyridine nucleotide-disulphide
oxidoreductase [Brucella abortus bv. 3 str. Tulya]
Length = 276
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 140/268 (52%), Gaps = 21/268 (7%)
Query: 19 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDDRLRHYATT 76
+VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F + L YA
Sbjct: 16 IVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPEDLSAYARR 75
Query: 77 QLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGR 135
L K GV + GI VKD+ + + + D +P VW+ GV S LD GR
Sbjct: 76 ALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLDAESDRAGR 134
Query: 136 IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGG 195
+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 135 VKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR-------- 185
Query: 196 RANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLT 255
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W W A++
Sbjct: 186 --SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWWFWGIAHIF 237
Query: 256 RVVSWRNRFYVAVNWATTFVFGRDISRI 283
++ R+R VA +W T++ G+ +R+
Sbjct: 238 FLIGTRSRAAVAWSWLWTYITGQHSARL 265
>gi|160874289|ref|YP_001553605.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Shewanella baltica OS195]
gi|378707533|ref|YP_005272427.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Shewanella baltica OS678]
gi|418023156|ref|ZP_12662141.1| NADH dehydrogenase [Shewanella baltica OS625]
gi|160859811|gb|ABX48345.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Shewanella baltica OS195]
gi|315266522|gb|ADT93375.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Shewanella baltica OS678]
gi|353537039|gb|EHC06596.1| NADH dehydrogenase [Shewanella baltica OS625]
Length = 429
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 128/246 (52%), Gaps = 18/246 (7%)
Query: 19 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSFDDRLRHYATT 76
+VG G TGVE + EL I Y ++ ++ V LIEA+ +IL +R+ A
Sbjct: 170 IVGAGATGVELAAELHHVIESVKEYGYLNIATHHLDVHLIEASPKILPQLPERVSARAQA 229
Query: 77 QLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGV-GPSTLVKSLDLPKSPGG 134
L K G+RL G+ VK+V I DG + GL VW+ GV GP LP +P
Sbjct: 230 VLDKIGIRLHIGVQVKEVTRDGFITQDGDVIKAGLKVWAAGVKGPKAFQNFTKLPITPRN 289
Query: 135 RIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF-SLLNRIGKAG 193
++ +D+ +RV QD++A+GDC+ ++S+G+ V P AQ A + LF +++NR+
Sbjct: 290 QVEVDDCMRVKGHQDIYALGDCALLIQSSGQPV-PPRAQAAAQMADTLFDNIVNRL---- 344
Query: 194 GGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAY 253
G+ A FVY+ GS+ ++ R+ A+ +L N S + G ++ L++ S Y
Sbjct: 345 QGKPEKA--------FVYKDYGSLVSLSRFSAVGNLMGNLRSGTFFVEGHIARLMYISLY 396
Query: 254 LTRVVS 259
+ S
Sbjct: 397 QRHLAS 402
>gi|297620671|ref|YP_003708808.1| Pyridine nucleotide-disulfide oxidoreductase [Waddlia chondrophila
WSU 86-1044]
gi|297375972|gb|ADI37802.1| Pyridine nucleotide-disulfide oxidoreductase [Waddlia chondrophila
WSU 86-1044]
Length = 415
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 30/280 (10%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEANE-ILSSF 66
E+ + L V+VGGGPTGVE +G +++ + + + V + + +IE + +L +F
Sbjct: 151 EQIASELRFVIVGGGPTGVEMAGSIAEIARKTLFNNFRRIVPENSEILIIEGTDRLLHTF 210
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
+ L A L + GV++ V ++ + + +N+ +P ++W+ G S L+K+
Sbjct: 211 PEELSKKALEDLQQMGVKVRTHTHVTNITEKGVYINEEF-IPTSNVIWAAGNQASPLLKT 269
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
L++P+ GR ++E L +P +VF +GD + G LP +A VA +QG+Y+
Sbjct: 270 LNVPQDRSGRAIVNEDLSIPGYSNVFVIGDAACAKNREGNP-LPGIAPVAIQQGRYV--- 325
Query: 186 LNRIGKAGGGRANSAKDMELGD--PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
AK +E G+ PF Y G MAT+G KA+ + + G
Sbjct: 326 --------------AKVIETGERPPFHYVDKGVMATVGTSKAVAAIGKR------CFTGL 365
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L+W W ++ ++S+ NR V + W ++ G RI
Sbjct: 366 LAWFAWCFIHIFYLISFPNRLIVMMQWMIMYLGGNRHVRI 405
>gi|151946043|gb|EDN64274.1| NADH:ubiquinone oxidoreductase [Saccharomyces cerevisiae YJM789]
Length = 513
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 157/296 (53%), Gaps = 31/296 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSF 66
+ E+ RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + + L+EA I L+ F
Sbjct: 222 DPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMF 281
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLVWSTGV 117
+ +L YA + L + +++ +R V V+ ++L+ E +PYG L+W+TG
Sbjct: 282 EKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGN 341
Query: 118 GPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
++ L +P+ + + ++++L+V ++FA+GD + LP AQ
Sbjct: 342 KARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAF-------AGLPPTAQ 394
Query: 174 VAERQGKYLFSLLNRIGKAGGGRAN--SAKD-----MELGD--PFVYRHLGSMATIGRYK 224
VA ++ +YL +++ + + N S KD E + PF Y LG++A +G +
Sbjct: 395 VAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFEENNFKPFKYNDLGALAYLGSER 454
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
A+ +R K + + G +++ +WR YL+ ++S R+R V +W F RD
Sbjct: 455 AIATIRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDF 509
>gi|108804058|ref|YP_643995.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Rubrobacter xylanophilus DSM 9941]
gi|108765301|gb|ABG04183.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Rubrobacter xylanophilus DSM 9941]
Length = 450
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 139/274 (50%), Gaps = 21/274 (7%)
Query: 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSSFDDRLRH 72
L VV+GGG TGVE + ++ + + Y ++ + + + L+EA EIL D LR
Sbjct: 182 LTFVVIGGGATGVEVASQIHTLVHEHLASDYPNIDPNRVRIYLVEALPEILPELDPALRK 241
Query: 73 YATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 131
A +L + + L + ++V + + L G E+ ++W+ G P+ +++ L LP
Sbjct: 242 AARNRLYRQRIEVLTNTLAEEVTADCVRLKGGGEISSENVIWTAGNRPNAVIQRLGLPYD 301
Query: 132 PGGRIGIDEWLRVPSVQDVFAVGDCSGY--LESTGKTVLPALAQVAERQGKYLFSLLNRI 189
I +DE+LRV +D++A+GDC+ + GK ++P AQ A ++GK ++ +
Sbjct: 302 EKNGIRVDEYLRVEGHRDIWAIGDCAAIPDVRQEGK-IVPPNAQAAVQEGK---TVARNV 357
Query: 190 GKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVW 249
GR + + E Y+ LG + +G A+ E G+ +GFL+ L W
Sbjct: 358 LAVLDGREDELERFE------YKPLGQLVELGSDFAV------NEVMGVRFSGFLAALFW 405
Query: 250 RSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
R AYL R+ S +++ VA +W +F ++++
Sbjct: 406 RLAYLVRLTSPQSKARVAADWIVSFFLRPAVTQV 439
>gi|406867579|gb|EKD20617.1| external NADH-ubiquinone oxidoreductase 2 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 484
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 145/300 (48%), Gaps = 41/300 (13%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L G SE + LLH V+VGGGPTGVE + EL + + + + Y +D + +++ + A+
Sbjct: 205 LPGFSEGRRRDLLHFVIVGGGPTGVELAAELDELVHGHLLEIYPDCRDLVSISVYDVADR 264
Query: 62 ILSSFDDRLRHYATTQLSKSGV-----RLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTG 116
+L F ++L YA + + V R ++G K V S K DG EV +G+ VW+ G
Sbjct: 265 MLGQFGEKLSEYAMEKFRRRDVNVRMSRHIQGFEKGVMSVK---EDG-EVGFGVAVWAAG 320
Query: 117 VGPSTLVKSLD-LPKSPGGRIGIDEWLRV-------PSVQDVFAVGDCSGYLESTGKTVL 168
S LV+ + + K G + D+ LRV +V+ V+A+GD +G ++ L
Sbjct: 321 NKTSGLVEGMKGVRKDDKGMLVTDQHLRVLGDGQGDGAVRGVYALGDAAGIDGNS----L 376
Query: 169 PALAQVAERQGKYLFSLLNRIGKA------GGGRANSAKDMELGDPFVYRHLGSMATIGR 222
PA A+VA ++ K+L L I A G RA K G F Y +A IGR
Sbjct: 377 PATAEVAVQKAKWLAQHL--IDSADDELAFGSSRAAQVK----GQGFQYEQKALVAYIGR 430
Query: 223 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282
+VD G + G +WL WR L SWR + + V W GR+I+R
Sbjct: 431 KDGVVD-------GGGAWTGKSAWLAWRGGSLQWSRSWRRKAMMLVYWVMNKWDGREIAR 483
>gi|13470607|ref|NP_102176.1| NADH dehydrogenase [Mesorhizobium loti MAFF303099]
gi|14021349|dbj|BAB47962.1| NADH dehydrogenase [Mesorhizobium loti MAFF303099]
Length = 424
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 147/277 (53%), Gaps = 21/277 (7%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEA-NEILSSFD 67
++ LL +VGGGPTGVE +G + + +R + ++ V LIEA + IL++F
Sbjct: 157 KREALLTIAIVGGGPTGVELAGTIVELAHDTLRGEFRNIDTRQTRVVLIEAGDRILANFA 216
Query: 68 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
+L YA+ L + GV + G V D++ ++ D ++ ++W+ GV S + L
Sbjct: 217 PKLSDYASKALERLGVTVELGRAVTRCDAEGVVFGD-KQLAARTILWAAGVAASPAAEWL 275
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
GR+ ++ L VP ++F +GD + L G+ V P +A A+++G+++ + +
Sbjct: 276 GAKADRAGRVLVEPDLGVPGSPEIFVIGDAALVLRPDGRPV-PGVAPSAKQEGRHVAATI 334
Query: 187 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
KA G N+A+ PF Y+H G +ATIG+ A +D + L G+L+W
Sbjct: 335 ----KARLGGDNTAR------PFHYKHAGDLATIGKRAAAIDF------GWIKLTGWLAW 378
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W A++ ++ +RNR V+++W +V G+ +R+
Sbjct: 379 WLWGIAHIYFLIGFRNRLAVSLSWLWIYVTGQRSARL 415
>gi|284033059|ref|YP_003382990.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Kribbella flavida DSM 17836]
gi|283812352|gb|ADB34191.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Kribbella flavida DSM 17836]
Length = 442
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 139/286 (48%), Gaps = 34/286 (11%)
Query: 4 AGISEE--EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-A 59
A ++E+ E+ + VV+G GPTGVE +G+L+ R +R ++ + + V L + A
Sbjct: 162 AAVAEDPDERREWMTFVVIGAGPTGVELAGQLAAMARRTLRDQFRDLDLSEVRVVLADGA 221
Query: 60 NEILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT--EVPYG-LLVWST 115
+ +L +F + LR + +L K GV +V G DV + G +V +G ++W+
Sbjct: 222 DSVLGAFPETLRKHTHRRLQKLGVEIVLGAFATDVKPAAVTFKAGEHEQVIHGRTILWTA 281
Query: 116 GVGPSTLV----KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 171
GV S L K++ GGR+ + R+P ++F +GD + LP +
Sbjct: 282 GVQASPLTRDLAKAIGAETDRGGRVVVGPDCRLPGHPEIFVIGDAANVAN------LPGI 335
Query: 172 AQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQ 231
A+ A ++GKY+ ++ ++ + +PF Y LG+MATI A+ D+R
Sbjct: 336 AEPAMQEGKYVAKVIR----------HTLEGEPFDEPFKYLDLGTMATISPGDAVADIR- 384
Query: 232 NKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFG 277
GL L G + L W + +L +V W NR V WA T + G
Sbjct: 385 -----GLRLKGVIGKLAWAAVHLAFLVGWGNRASVLTTWAATTLNG 425
>gi|149176922|ref|ZP_01855531.1| NADH dehydrogenase [Planctomyces maris DSM 8797]
gi|148844177|gb|EDL58531.1| NADH dehydrogenase [Planctomyces maris DSM 8797]
Length = 448
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 149/285 (52%), Gaps = 36/285 (12%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSG---ELSDFIM-RDVRQ-RYSHVKDYIHVTLIEAN-EI 62
+E+ + L V+VGGGPTGVE +G E+S F + RD R+ SH + V L+EA I
Sbjct: 161 DEQKKYLTYVIVGGGPTGVELAGAIGEMSRFTLSRDFRRINPSHTR----VILVEAGPRI 216
Query: 63 LSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPST 121
L F ++ + A L K GV++ +V +++ + + L D + ++W+ GV S
Sbjct: 217 LPMFSEQQSNRAARDLEKLGVQIWTSSVVTNINDEGVELGD-ERIRAATVLWAAGVEASE 275
Query: 122 LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 181
L ++ + GR+ ++ L + +VF GD + Y TG + LP A VA +QG++
Sbjct: 276 LGQAGGMHVDNRGRVLVEPDLSLEGYPNVFVAGDQASYTHQTG-SPLPGTAPVALQQGRF 334
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKESKGL 238
IGK + ++ G P F +R G MATIGR +A+V++ + L
Sbjct: 335 -------IGK-------TIRNEVKGKPRSKFHFRDKGQMATIGRSRAIVEMGR------L 374
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
LAGF +W+VW ++ + ++NR V + WA +++ R +R+
Sbjct: 375 KLAGFFAWVVWLVVHVFYLTGFKNRVLVVMQWAWSYLSFRRGARL 419
>gi|85708933|ref|ZP_01039999.1| hypothetical protein NAP1_06820 [Erythrobacter sp. NAP1]
gi|85690467|gb|EAQ30470.1| hypothetical protein NAP1_06820 [Erythrobacter sp. NAP1]
Length = 744
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 138/276 (50%), Gaps = 29/276 (10%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSSF 66
E RLL V+VG GPTGVE +G +++ V + + V L+++ + +L +F
Sbjct: 473 ERIKRLLTFVIVGAGPTGVELAGAIAELARVSVEREFRTCDPSTAQVILVQSGDRVLPAF 532
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
+ L A L K GV + + G V ++ + + + + T + ++W+ GV S K
Sbjct: 533 PEELSTEAMASLEKLGVEVRLGGRVTEIAERHVRIGEDTVIETETVLWAAGVAASPAAKW 592
Query: 126 LDLPKSPGGRIGIDEWLRV-----PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGK 180
LD GRI ++ LRV +++DVFA+GD +G + GK V P LA A++ G
Sbjct: 593 LDAKADRAGRIEVNHNLRVLRPNGAAIEDVFAIGDTAGSMAWDGKPV-PGLAPAAKQAGV 651
Query: 181 YLFSLLNR--IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 238
++ ++ +GK G PF Y+H GS+ATIGR A+ D K
Sbjct: 652 HVSRVIEAELLGKPCPG------------PFAYKHQGSLATIGRKSAVADFGLFK----- 694
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
L+G L+W +W ++ + RNR V VNWA +F
Sbjct: 695 -LSGALAWWLWGLVHVGFLTGARNRVTVTVNWAWSF 729
>gi|429738579|ref|ZP_19272379.1| putative phage DNA packaging protein [Prevotella saccharolytica
F0055]
gi|429159876|gb|EKY02372.1| putative phage DNA packaging protein [Prevotella saccharolytica
F0055]
Length = 458
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 134/270 (49%), Gaps = 23/270 (8%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD--YIHVTLIEA-NEILSSF 66
E+ LL+ V+VGGG TGVE +G LS+ + R + H D +++ LIEA N +LS+
Sbjct: 158 EQQELLNVVIVGGGATGVEIAGVLSE-MKRTILPHDYHDLDPSLMNIYLIEAGNRLLSAM 216
Query: 67 DDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
L + GV L+ +V D K++L DG+ + +W +GV +
Sbjct: 217 SPESSAAVEKYLRQMGVNILLNKMVTDYQDHKVMLADGSSISTRTFIWVSGVAGQPVGNL 276
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFS 184
G RI +D + RV + DVF +GD C + P LAQ A +QG L +
Sbjct: 277 NPEHLGRGRRIRVDTFNRVIGLDDVFCIGDQCLVEGDPEYPNGHPQLAQPAIQQGSNLAN 336
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
R+ K K+++ PF Y++LG+MAT+GR KA+ + + + + GF
Sbjct: 337 NFRRMLK--------GKELK---PFCYKNLGAMATVGRNKAVAEFAR------IKMKGFW 379
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
+WL+W +L ++ RN+ V +NW +
Sbjct: 380 AWLMWLIVHLRSILGVRNKVVVLLNWVWNY 409
>gi|6323515|ref|NP_013586.1| NADH-ubiquinone reductase (H(+)-translocating) NDI1 [Saccharomyces
cerevisiae S288c]
gi|417349|sp|P32340.1|NDI1_YEAST RecName: Full=Rotenone-insensitive NADH-ubiquinone oxidoreductase,
mitochondrial; AltName: Full=Internal NADH
dehydrogenase; AltName: Full=NADH:ubiquinone reductase
(non-electrogenic); Flags: Precursor
gi|805022|emb|CAA89160.1| Ndi1p [Saccharomyces cerevisiae]
gi|51830478|gb|AAU09768.1| YML120C [Saccharomyces cerevisiae]
gi|256270026|gb|EEU05272.1| Ndi1p [Saccharomyces cerevisiae JAY291]
gi|285813883|tpg|DAA09778.1| TPA: NADH-ubiquinone reductase (H(+)-translocating) NDI1
[Saccharomyces cerevisiae S288c]
gi|392297143|gb|EIW08243.1| Ndi1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 513
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 157/296 (53%), Gaps = 31/296 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSF 66
+ E+ RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + + L+EA I L+ F
Sbjct: 222 DPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMF 281
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLVWSTGV 117
+ +L YA + L + +++ +R V V+ ++L+ E +PYG L+W+TG
Sbjct: 282 EKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGN 341
Query: 118 GPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
++ L +P+ + + ++++L+V ++FA+GD + LP AQ
Sbjct: 342 KARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAF-------AGLPPTAQ 394
Query: 174 VAERQGKYLFSLLNRIGKAGGGRAN--SAKD-----MELGD--PFVYRHLGSMATIGRYK 224
VA ++ +YL +++ + + N S KD E + PF Y LG++A +G +
Sbjct: 395 VAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFEENNFKPFKYNDLGALAYLGSER 454
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
A+ +R K + + G +++ +WR YL+ ++S R+R V +W F RD
Sbjct: 455 AIATIRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDF 509
>gi|325104767|ref|YP_004274421.1| NADH dehydrogenase (ubiquinone) [Pedobacter saltans DSM 12145]
gi|324973615|gb|ADY52599.1| NADH dehydrogenase (ubiquinone) [Pedobacter saltans DSM 12145]
Length = 432
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 136/278 (48%), Gaps = 27/278 (9%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--IHVTLIE-ANEILS 64
E+ K LL+ V+VG GPTGVE +G L++ + YS + D+ + + L+E AN +L
Sbjct: 154 EQVKEALLNFVIVGAGPTGVETAGALAELKKHVLPSDYSEL-DFSKMKIYLVEGANRVLP 212
Query: 65 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
F ++ A + L + GV L +V D + + DG + +VWS GV ++
Sbjct: 213 PFSEQASRKAQSFLEEMGVDVLTNTMVDQYDGKVISFKDGKTIRTNNVVWSAGV-KGAVI 271
Query: 124 KSLDLPK-SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLE-STGKTVLPALAQVAERQGKY 181
+D + GGRI + + ++FA+GD S Y+E P +AQVA +QG+
Sbjct: 272 PGIDKAQIVRGGRIKTTTYNLIEGYNNIFAIGDVS-YMEVEKFPNGHPGVAQVAIQQGQQ 330
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
L L R+ + E PF Y GSMAT+GR KA+VDL K
Sbjct: 331 LGDNLIRL-----------INNEEVKPFDYFDKGSMATVGRNKAVVDL------KFWKFQ 373
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
GF +WL W +L + +RN+ +NW + F +D
Sbjct: 374 GFFAWLTWMFIHLLFLAGFRNKLVTLMNWIVNY-FSQD 410
>gi|323352920|gb|EGA85220.1| Ndi1p [Saccharomyces cerevisiae VL3]
Length = 471
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 157/296 (53%), Gaps = 31/296 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSF 66
+ E+ RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + + L+EA I L+ F
Sbjct: 180 DPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMF 239
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLVWSTGV 117
+ +L YA + L + +++ +R V V+ ++L+ E +PYG L+W+TG
Sbjct: 240 EKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGN 299
Query: 118 GPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
++ L +P+ + + ++++L+V ++FA+GD + LP AQ
Sbjct: 300 KARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAF-------AGLPPTAQ 352
Query: 174 VAERQGKYLFSLLNRIGKAGGGRAN--SAKD-----MELGD--PFVYRHLGSMATIGRYK 224
VA ++ +YL +++ + + N S KD E + PF Y LG++A +G +
Sbjct: 353 VAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLWFEENNFKPFKYNDLGALAYLGSER 412
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
A+ +R K + + G +++ +WR YL+ ++S R+R V +W F RD
Sbjct: 413 AIATIRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDF 467
>gi|147812464|emb|CAN59739.1| hypothetical protein VITISV_027063 [Vitis vinifera]
Length = 578
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 99/165 (60%), Gaps = 9/165 (5%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L +S+EE+ R LH V+VGGGPTGVEF+ EL DFI+ D+ + Y VKD + +T+I++ +
Sbjct: 210 LPDLSDEERRRNLHFVIVGGGPTGVEFAAELHDFILEDLVKLYPMVKDLVKITVIQSGDH 269
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILN-----DGTEVPYGLLVWST 115
IL+ FD+R+ +A + + G+ + G V V + + + + VPYG++VWST
Sbjct: 270 ILNMFDERISSFAERKFGRDGIEVQTGCRVTGVSDKAMTVKVKSKGEICSVPYGMVVWST 329
Query: 116 GVGPSTLVKSL--DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSG 158
G+ +++ + ++ + +EWLRV V+A+GDC+
Sbjct: 330 GIVTRPVLRDFMDQIGQNKRHVLTTNEWLRVEGCDGVYALGDCAA 374
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 168 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRY 223
LPA AQVA +QG YL S +R + + + G PF Y+HLG A +G
Sbjct: 464 LPATAQVAAQQGAYLSSCFSRRQQCQETPEGPLRFRDSGRHHFRPFRYKHLGQFAPLGGE 523
Query: 224 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+A +L + S G S WL W S Y ++ VSWR RF V +W F+FGRD SRI
Sbjct: 524 QAAAELPGDWVSIGHST----QWL-WYSVYASKQVSWRTRFLVVSDWTRRFIFGRDSSRI 578
>gi|190408127|gb|EDV11392.1| NADH:ubiquinone oxidoreductase [Saccharomyces cerevisiae RM11-1a]
gi|207342620|gb|EDZ70335.1| YML120Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259148453|emb|CAY81698.1| Ndi1p [Saccharomyces cerevisiae EC1118]
Length = 513
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 157/296 (53%), Gaps = 31/296 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSF 66
+ E+ RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + + L+EA I L+ F
Sbjct: 222 DPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMF 281
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLVWSTGV 117
+ +L YA + L + +++ +R V V+ ++L+ E +PYG L+W+TG
Sbjct: 282 EKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGN 341
Query: 118 GPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
++ L +P+ + + ++++L+V ++FA+GD + LP AQ
Sbjct: 342 KARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAF-------AGLPPTAQ 394
Query: 174 VAERQGKYLFSLLNRIGKAGGGRAN--SAKD-----MELGD--PFVYRHLGSMATIGRYK 224
VA ++ +YL +++ + + N S KD E + PF Y LG++A +G +
Sbjct: 395 VAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLWFEENNFKPFKYNDLGALAYLGSER 454
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
A+ +R K + + G +++ +WR YL+ ++S R+R V +W F RD
Sbjct: 455 AIATIRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDF 509
>gi|403072239|pdb|4G9K|A Chain A, Structure Of The Ndi1 Protein From Saccharomyces
Cerevisiae
gi|403072240|pdb|4G9K|B Chain B, Structure Of The Ndi1 Protein From Saccharomyces
Cerevisiae
gi|403072241|pdb|4GAP|A Chain A, Structure Of The Ndi1 Protein From Saccharomyces
Cerevisiae In Complex With Nad+
gi|403072242|pdb|4GAP|B Chain B, Structure Of The Ndi1 Protein From Saccharomyces
Cerevisiae In Complex With Nad+
gi|403072243|pdb|4GAV|A Chain A, Structure Of The Ndi1 Protein From Saccharomyces
Cerevisiae In Complex With Quinone
gi|403072244|pdb|4GAV|B Chain B, Structure Of The Ndi1 Protein From Saccharomyces
Cerevisiae In Complex With Quinone
Length = 471
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 157/296 (53%), Gaps = 31/296 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSF 66
+ E+ RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + + L+EA I L+ F
Sbjct: 180 DPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMF 239
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLVWSTGV 117
+ +L YA + L + +++ +R V V+ ++L+ E +PYG L+W+TG
Sbjct: 240 EKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGN 299
Query: 118 GPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
++ L +P+ + + ++++L+V ++FA+GD + LP AQ
Sbjct: 300 KARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAF-------AGLPPTAQ 352
Query: 174 VAERQGKYLFSLLNRIGKAGGGRAN--SAKD-----MELGD--PFVYRHLGSMATIGRYK 224
VA ++ +YL +++ + + N S KD E + PF Y LG++A +G +
Sbjct: 353 VAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFEENNFKPFKYNDLGALAYLGSER 412
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
A+ +R K + + G +++ +WR YL+ ++S R+R V +W F RD
Sbjct: 413 AIATIRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDF 467
>gi|409973922|pdb|4G6G|A Chain A, Crystal Structure Of Ndh With Trt
gi|409973923|pdb|4G6G|B Chain B, Crystal Structure Of Ndh With Trt
gi|409973924|pdb|4G6H|A Chain A, Crystal Structure Of Ndh With Nadh
gi|409973925|pdb|4G6H|B Chain B, Crystal Structure Of Ndh With Nadh
gi|409973926|pdb|4G73|A Chain A, Crystal Structure Of Ndh With Nadh And Quinone
gi|409973927|pdb|4G73|B Chain B, Crystal Structure Of Ndh With Nadh And Quinone
gi|409973928|pdb|4G74|A Chain A, Crystal Structure Of Ndh With Quinone
gi|409973929|pdb|4G74|B Chain B, Crystal Structure Of Ndh With Quinone
Length = 502
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 157/296 (53%), Gaps = 31/296 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSF 66
+ E+ RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + + L+EA I L+ F
Sbjct: 211 DPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMF 270
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLVWSTGV 117
+ +L YA + L + +++ +R V V+ ++L+ E +PYG L+W+TG
Sbjct: 271 EKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGN 330
Query: 118 GPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
++ L +P+ + + ++++L+V ++FA+GD + LP AQ
Sbjct: 331 KARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAF-------AGLPPTAQ 383
Query: 174 VAERQGKYLFSLLNRIGKAGGGRAN--SAKD-----MELGD--PFVYRHLGSMATIGRYK 224
VA ++ +YL +++ + + N S KD E + PF Y LG++A +G +
Sbjct: 384 VAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFEENNFKPFKYNDLGALAYLGSER 443
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
A+ +R K + + G +++ +WR YL+ ++S R+R V +W F RD
Sbjct: 444 AIATIRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDF 498
>gi|384510883|ref|YP_005690461.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis PAT10]
gi|341824822|gb|AEK92343.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis PAT10]
Length = 436
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 132/273 (48%), Gaps = 32/273 (11%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIE-ANEILSSFD 67
E+ RLL V+VG GPTGVE +G+L++ R + Y+ + LI+ A +IL F
Sbjct: 148 ERDRLLTFVIVGAGPTGVELAGQLAEMAHRTLAGEYTRFNPANAKIILIDGAPQILPPFG 207
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLL-----VWSTGVGPST 121
RL A +L K GV + + IV D+D + T+ + +WS GV S
Sbjct: 208 KRLGRNAQRELEKIGVTVKLNAIVTDLDEDSVTYKSTTDNSTHTINSFCKIWSAGVAASP 267
Query: 122 LVK----SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
L K L++ GR+ ++ L V S ++VF +GD LP +AQ A +
Sbjct: 268 LGKVLADQLEVEVDRAGRVPVNPDLSVGSDKNVFVIGDMMSL------NNLPGVAQTAIQ 321
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
G Y + +I GR SA + E PF Y GSMAT+ R+ A+V L +
Sbjct: 322 GGAY---VAEQIAAEVEGR--SADERE---PFEYYDKGSMATVSRFNAVVKLGK------ 367
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+ + GF+ W +W +L +V +RNR A +W
Sbjct: 368 VEVTGFIGWAMWLCVHLMFLVGFRNRATAAFSW 400
>gi|383314192|ref|YP_005375047.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis P54B96]
gi|380869693|gb|AFF22167.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis P54B96]
Length = 436
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 132/273 (48%), Gaps = 32/273 (11%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIE-ANEILSSFD 67
E+ RLL V+VG GPTGVE +G+L++ R + Y+ + LI+ A +IL F
Sbjct: 148 ERDRLLTFVIVGAGPTGVELAGQLAEMAHRTLAGEYTRFNPANAKIILIDGAPQILPPFG 207
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLL-----VWSTGVGPST 121
RL A +L K GV + + IV D+D + T+ + +WS GV S
Sbjct: 208 KRLGRNAQRELEKIGVTVKLNAIVTDLDEDSVTYKSTTDNSTHTINSFCKIWSAGVAASP 267
Query: 122 LVK----SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
L K L++ GR+ ++ L V S ++VF +GD LP +AQ A +
Sbjct: 268 LGKVLADQLEVEVDRAGRVPVNPDLSVGSDKNVFVIGDMMSL------NNLPGVAQTAIQ 321
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
G Y + +I GR SA + E PF Y GSMAT+ R+ A+V L +
Sbjct: 322 GGAY---VAEQIAAEVEGR--SADERE---PFEYYDKGSMATVSRFNAVVKLGK------ 367
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+ + GF+ W +W +L +V +RNR A +W
Sbjct: 368 VEVTGFIGWAMWLCVHLMFLVGFRNRATAAFSW 400
>gi|428222013|ref|YP_007106183.1| NADH dehydrogenase, FAD-containing subunit [Synechococcus sp. PCC
7502]
gi|427995353|gb|AFY74048.1| NADH dehydrogenase, FAD-containing subunit [Synechococcus sp. PCC
7502]
Length = 440
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 134/286 (46%), Gaps = 29/286 (10%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEANE-ILSSF 66
E++ LL VV+GGGPTGVE +G + + + +S++ + L+E E IL +
Sbjct: 151 EKRKALLTFVVIGGGPTGVELAGAIGELANHTLHDEFSNINTTEAEILLLEGFERILPPY 210
Query: 67 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDG---TEVPYGLLVWSTGVGPSTL 122
L AT L+K GV + G IV ++ + G EV ++W+ GV S L
Sbjct: 211 APDLSASATDALTKLGVTVKTGAIVTNIHDHVVTFRCGDRTEEVTAQTILWAAGVKASAL 270
Query: 123 ----VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 178
K D P GR+ + L VP+ +F +GD + Y LP +A VA +Q
Sbjct: 271 GEILAKRADAPLDRVGRVMVSPDLSVPNHPSLFVIGDLAHYAHQDEGKPLPGVAPVAMQQ 330
Query: 179 GKYLFSLLNRIGKAGGGRANSAKDMELGDP-FVYRHLGSMATIGRYKALVDLRQNKESKG 237
G+++ LL A+ L P F Y GS+A IGR A+VDLR K
Sbjct: 331 GEFIAKLLK------------AQIRNLPLPQFRYVDRGSLAVIGRNAAVVDLRFMK---- 374
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
L G +WL+W ++ +V + N+ V V WA + + +RI
Sbjct: 375 --LTGMPAWLIWTFLHIFYLVEFDNQLVVMVQWAFNYFTRKRGARI 418
>gi|398828325|ref|ZP_10586526.1| NADH dehydrogenase, FAD-containing subunit [Phyllobacterium sp.
YR531]
gi|398218360|gb|EJN04870.1| NADH dehydrogenase, FAD-containing subunit [Phyllobacterium sp.
YR531]
Length = 431
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 135/277 (48%), Gaps = 21/277 (7%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD--YIHVTLIEA-NEILSSF 66
++ LL V++GGGPTGVE +G L+D + RD + V D V LIE + +L +F
Sbjct: 159 KREELLTFVIIGGGPTGVEIAGTLAD-LARDTLKGDFRVIDPAMAKVVLIEGGSRVLGAF 217
Query: 67 DDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
++ L YA L K GV + G + G + ++W+ GV S K L
Sbjct: 218 NEELSAYAQRALEKLGVTVHVGNPVTACHADGVEFAGHSLRAKTIIWAAGVQASPAAKWL 277
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
+ P GR+ ++ L P ++F +GD + + + K +P +A A++QG ++ +
Sbjct: 278 NAPADRAGRLAVNPDLTAPDHPEIFVIGDTA-TVANGDKGNVPGIAPAAKQQGAHVAKTI 336
Query: 187 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
+A A D E PF YRH G +ATIG+ A+ D + L G+ +W
Sbjct: 337 ---------KARLAGDNE-PKPFRYRHAGDLATIGKRAAVTDF------GFIKLKGYPAW 380
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W A++ ++ RNR VA++W V G +R+
Sbjct: 381 WLWGLAHIYFLIGVRNRLAVALSWLWISVTGARSARL 417
>gi|340792211|ref|YP_004757675.1| NADH dehydrogenase [Brucella pinnipedialis B2/94]
gi|340560670|gb|AEK55907.1| NADH dehydrogenase [Brucella pinnipedialis B2/94]
Length = 441
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 143/276 (51%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F +
Sbjct: 173 RQALLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPE 232
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 233 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 291
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 292 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR 350
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 351 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 394
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W A++ ++ R+R +A +W T++ G+ +R+
Sbjct: 395 FWGIAHIFFLIGTRSRAAMAWSWLWTYITGQHSARL 430
>gi|363422200|ref|ZP_09310280.1| NADH dehydrogenase [Rhodococcus pyridinivorans AK37]
gi|359733424|gb|EHK82419.1| NADH dehydrogenase [Rhodococcus pyridinivorans AK37]
Length = 457
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 141/279 (50%), Gaps = 37/279 (13%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSF 66
E + LL +VVG GPTGVE +G++ + R + +++ D + VTL+E A+++L F
Sbjct: 163 ERRKNLLSFIVVGAGPTGVELAGQIKELAQRYFAENIGNIRADDVTVTLVEGADKVLPPF 222
Query: 67 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLILNDGTEVPYGLLVWSTGVGPS 120
+L Y+ L KSGV +V G +V D+D + + ++WS G+ +
Sbjct: 223 GGKLSEYSKESLEKSGVDVVLGTMVTDIDEHGATLTTPTTEETRRLTAETIIWSAGIQAN 282
Query: 121 ----TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
L + GGR+ +D V ++FA+GD L++ LPA + A
Sbjct: 283 DFADVLAERTGCETVRGGRLLVDPDFTVGRSDNIFAIGDMV-TLDN-----LPAQSPFAM 336
Query: 177 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
+ G+++ ++ GK + +G PF Y+ GSMA I R++A+ + +
Sbjct: 337 QGGRHVAKMIT--GK-----------VAMGTPFQYKDKGSMAIINRFRAITRVGK----- 378
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+ L GF++W++W + +L +V +RNR+ ++W +F+
Sbjct: 379 -IELTGFIAWVLWLAVHLVYLVGFRNRYIAVMSWCGSFL 416
>gi|392391312|ref|YP_006427915.1| NADH dehydrogenase, FAD-containing subunit [Ornithobacterium
rhinotracheale DSM 15997]
gi|390522390|gb|AFL98121.1| NADH dehydrogenase, FAD-containing subunit [Ornithobacterium
rhinotracheale DSM 15997]
Length = 441
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 131/268 (48%), Gaps = 22/268 (8%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEA-NEILSSFD 67
E+ RL++ V+VGGGPTGVE +G S+ + Y + ++V LI+A + +L F
Sbjct: 156 ERERLMNFVIVGGGPTGVELAGAFSELKNHVLPNDYPDLDIRRMNVHLIQAVDRLLPGFS 215
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
D+ L K V + + IV+D D K+ + L+W+ GV ST + +
Sbjct: 216 DKASTKVAEYLRKMDVHVWLNTIVQDYDG-KVAKTNLRNFETSTLIWAAGVQGST-IDGM 273
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
GR +D + +V V+D++A+GD + P +AQ A +QGK L L
Sbjct: 274 PEESVERGRYKVDLYNKVLGVEDIYAIGDIACMQSEDYPHGHPMVAQPAIQQGKLLARNL 333
Query: 187 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
N + + K+M+ F Y GSMATIGR KA+ D+ + K GF +W
Sbjct: 334 NAL--------SIGKEMK---AFKYNDKGSMATIGRNKAVADIGKFK------FTGFFAW 376
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTF 274
++W +L +V +RN+ VNW +
Sbjct: 377 MIWMFVHLISLVGFRNKVVALVNWVIQY 404
>gi|227549306|ref|ZP_03979355.1| NADH dehydrogenase [Corynebacterium lipophiloflavum DSM 44291]
gi|227078625|gb|EEI16588.1| NADH dehydrogenase [Corynebacterium lipophiloflavum DSM 44291]
Length = 465
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 135/279 (48%), Gaps = 31/279 (11%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIEA-NEILS 64
+ EE+ RLL V+VG GPTGVE +G++++ R YS+ V + LI+ ++L
Sbjct: 161 TAEERDRLLTFVIVGAGPTGVELAGQIAEMAHRSFAHGYSNFVPSQAKIVLIDGLPQVLP 220
Query: 65 SFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDG-----TEVPYGLLVWSTGVG 118
F RL A +L K GV +V +V +VD + + D T +P +WS GV
Sbjct: 221 PFGKRLGKRAQRELEKKGVTVVLNSMVVNVDEESVTYKDTKTEQETTIPSVTKIWSAGVQ 280
Query: 119 PSTLVK----SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 174
S L K + + G++ ++ L V +VF +GD + LP +AQV
Sbjct: 281 ASPLGKLIADQVGVEAERNGKVPVNSDLTVGDKSNVFIIGDM------MSRDRLPGVAQV 334
Query: 175 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKE 234
A + G+Y+ ++ + E D F Y GSMA + R+ A+V + +
Sbjct: 335 AIQTGQYVARVIKE-------QVEHDVAPEARDDFEYFDKGSMAIVSRFNAVVKMGK--- 384
Query: 235 SKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATT 273
+ ++GF+ WL+W + +++ + RN+F V+W T
Sbjct: 385 ---VEVSGFIGWLMWLAVHVSFLAGARNQFVTMVSWFTN 420
>gi|337290689|ref|YP_004629710.1| NADH dehydrogenase [Corynebacterium ulcerans BR-AD22]
gi|397653939|ref|YP_006494622.1| NADH dehydrogenase [Corynebacterium ulcerans 0102]
gi|334698995|gb|AEG83791.1| NADH dehydrogenase [Corynebacterium ulcerans BR-AD22]
gi|393402895|dbj|BAM27387.1| NADH dehydrogenase [Corynebacterium ulcerans 0102]
Length = 452
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 132/273 (48%), Gaps = 32/273 (11%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIE-ANEILSSFD 67
E+ RLL V+VG GPTGVE +G+L++ R + Y+ + L++ A ++L F
Sbjct: 164 ERDRLLTFVIVGAGPTGVELAGQLAEMAHRTLAGEYTRFNPANAKIILLDGAPQVLPPFG 223
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTEVPYGLL-VWSTGVGPST 121
RL A +L K GV + + IV DVD K +D T +WS GV S
Sbjct: 224 KRLGRNAQRELEKIGVTVKLNAIVTDVDENSVTYKSTTDDSTHTINSFCKIWSAGVAASP 283
Query: 122 LVK----SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
L K L + GR+ ++ L V S ++VF +GD LP +AQ A +
Sbjct: 284 LGKVLADQLGVEVDRAGRVPVNPDLSVGSEKNVFVIGDMMSL------NNLPGVAQTAIQ 337
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
G Y + +I GR SA + E PF Y GSMAT+ R+ A+V L +
Sbjct: 338 GGAY---VAEQIAAEVEGR--SADERE---PFEYYDKGSMATVSRFNAVVKLGK------ 383
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+ + GF+ W++W +L +V +RNR A +W
Sbjct: 384 VEVTGFIGWIMWLCVHLMFLVGFRNRATAAFSW 416
>gi|323332226|gb|EGA73636.1| Ndi1p [Saccharomyces cerevisiae AWRI796]
Length = 468
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 157/296 (53%), Gaps = 31/296 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSF 66
+ E+ RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + + L+EA I L+ F
Sbjct: 180 DPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMF 239
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLVWSTGV 117
+ +L YA + L + +++ +R V V+ ++L+ E +PYG L+W+TG
Sbjct: 240 EKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGN 299
Query: 118 GPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
++ L +P+ + + ++++L+V ++FA+GD + LP AQ
Sbjct: 300 KARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAF-------AGLPPTAQ 352
Query: 174 VAERQGKYLFSLLNRIGKAGGGRAN--SAKD-----MELGD--PFVYRHLGSMATIGRYK 224
VA ++ +YL +++ + + N S KD E + PF Y LG++A +G +
Sbjct: 353 VAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLWFEENNFKPFKYNDLGALAYLGSER 412
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
A+ +R K + + G +++ +WR YL+ ++S R+R V +W F RD
Sbjct: 413 AIATIRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDF 467
>gi|261313448|ref|ZP_05952645.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella pinnipedialis M163/99/10]
gi|261302474|gb|EEY05971.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella pinnipedialis M163/99/10]
Length = 424
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 143/276 (51%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F +
Sbjct: 156 RQALLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPE 215
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 216 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 274
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 275 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR 333
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 334 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 377
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W A++ ++ R+R +A +W T++ G+ +R+
Sbjct: 378 FWGIAHIFFLIGTRSRAAMAWSWLWTYITGQHSARL 413
>gi|323307863|gb|EGA61124.1| Ndi1p [Saccharomyces cerevisiae FostersO]
Length = 468
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 157/296 (53%), Gaps = 31/296 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSF 66
+ E+ RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + + L+EA I L+ F
Sbjct: 180 DPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMF 239
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLVWSTGV 117
+ +L YA + L + +++ +R V V+ ++L+ E +PYG L+W+TG
Sbjct: 240 EKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGN 299
Query: 118 GPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
++ L +P+ + + ++++L+V ++FA+GD + LP AQ
Sbjct: 300 KARLVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAF-------AGLPPTAQ 352
Query: 174 VAERQGKYLFSLLNRIGKAGGGRAN--SAKD-----MELGD--PFVYRHLGSMATIGRYK 224
VA ++ +YL +++ + + N S KD E + PF Y LG++A +G +
Sbjct: 353 VAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFEENNFKPFKYNDLGALAYLGSER 412
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
A+ +R K + + G +++ +WR YL+ ++S R+R V +W F RD
Sbjct: 413 AIATIRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDF 467
>gi|282859049|ref|ZP_06268185.1| pyridine nucleotide-disulphide oxidoreductase [Prevotella bivia
JCVIHMP010]
gi|424900121|ref|ZP_18323663.1| NADH dehydrogenase, FAD-containing subunit [Prevotella bivia DSM
20514]
gi|282588217|gb|EFB93386.1| pyridine nucleotide-disulphide oxidoreductase [Prevotella bivia
JCVIHMP010]
gi|388592321|gb|EIM32560.1| NADH dehydrogenase, FAD-containing subunit [Prevotella bivia DSM
20514]
Length = 435
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 143/275 (52%), Gaps = 38/275 (13%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIE-ANEILSS 65
E+K L++ V+VGGGP GVE +G +++ + + Y H+ + +H+ L+ A+ +LS+
Sbjct: 157 EKKQALMNVVIVGGGPAGVEIAGAVAEMKRNVIARDYPHLAANNRMHIYLVNAADRLLST 216
Query: 66 FDDRLRHYATTQLSKSGVRLVRGIVK-DVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
D+ A L + V + + + ++ L + G ++P ++W +G V+
Sbjct: 217 MDEYSSKKALEGLKELFVHVRQPYMALSYENGVLKTDKGLDIPAETVIWVSG------VR 270
Query: 125 SLDLPKSP------GGRIGIDEWLRVPSVQDVFAVGDCS---GYLESTGKTVLPALAQVA 175
+ +P P GRI D + +V V D++A+GD + G E G P LAQVA
Sbjct: 271 ATSMPGLPQDCYGRAGRIKTDRFCKVKGVDDIYAIGDINIIEGDAEYPGGH--PQLAQVA 328
Query: 176 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 235
+Q K + + N + +A G E F Y++LG+MATIGR +A+ ++ ++K
Sbjct: 329 IQQAKCVAN--NLVAEAKG---------EAPKMFKYKNLGTMATIGRNRAVAEIGKSK-- 375
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+GFL+W +W +L ++ +N+ ++ +NW
Sbjct: 376 ----FSGFLAWFLWLVVHLRSILGVKNKTFILLNW 406
>gi|261319314|ref|ZP_05958511.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella pinnipedialis B2/94]
gi|265986686|ref|ZP_06099243.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella pinnipedialis M292/94/1]
gi|261298537|gb|EEY02034.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella pinnipedialis B2/94]
gi|264658883|gb|EEZ29144.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella pinnipedialis M292/94/1]
Length = 424
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 143/276 (51%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VGGGPTGVE +G +++ R + + ++ V L+EA ILS+F +
Sbjct: 156 RQALLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEAGPRILSAFPE 215
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 216 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 274
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 275 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR 333
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 334 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 377
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W A++ ++ R+R +A +W T++ G+ +R+
Sbjct: 378 FWGIAHIFFLIGTRSRAAMAWSWLWTYITGQHSARL 413
>gi|162451296|ref|YP_001613663.1| NADH dehydrogenase [Sorangium cellulosum So ce56]
gi|161161878|emb|CAN93183.1| NADH dehydrogenase [Sorangium cellulosum So ce56]
Length = 445
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 136/276 (49%), Gaps = 22/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIE-ANEILSSFDD 68
+S + VVVG GPTGVE +G LS+ + + + + + L+E A ++L S+
Sbjct: 150 RSAWMTFVVVGAGPTGVELAGALSELARHTLVREFRRIDPSKARILLLEGAGQVLPSYVP 209
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L A QL+ V + V D+D + + + D + ++W GV S L ++L
Sbjct: 210 ELGEKARQQLAALNVEVRTNCRVTDIDEEGVSIGD-KRIEARTVLWGAGVAASALARTLG 268
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
+P GR+ + L VP +D++ +GD + + G T +P +A A + G++ +
Sbjct: 269 VPLDRAGRVLVAPDLTVPGHEDIYVIGDLASVKQEDG-TPVPGVAPAAIQGGRHAARCIA 327
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
R + G R PF Y GS++TIGR A+ D + L L+GFL+WL
Sbjct: 328 RTLR-GLPRL----------PFRYNDRGSLSTIGRAAAVADFGR------LKLSGFLAWL 370
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W ++ ++ +RNRF V +WA ++V SR+
Sbjct: 371 AWLFVHILFLIGFRNRFLVLFSWALSYVTYERASRL 406
>gi|385807484|ref|YP_005843881.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis 267]
gi|383804877|gb|AFH51956.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis 267]
Length = 452
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 132/273 (48%), Gaps = 32/273 (11%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIE-ANEILSSFD 67
E+ RLL V+VG GPTGVE +G+L++ R + Y+ + LI+ A +IL F
Sbjct: 164 ERDRLLTFVIVGAGPTGVELAGQLAEMAHRTLAGEYTRFNPANAKIILIDGAPQILPPFG 223
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLL-----VWSTGVGPST 121
RL A +L K GV + + IV D+D + T+ + +WS GV S
Sbjct: 224 KRLGRNAQRELEKIGVTVKLNAIVTDLDEDSVTYKSTTDNSTHTINSFCKIWSAGVAASP 283
Query: 122 LVK----SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
L K L++ GR+ ++ L V S ++VF +GD LP +AQ A +
Sbjct: 284 LGKVLADQLEVEVDRAGRVPVNPDLSVGSDKNVFVIGDMMSL------NNLPGVAQTAIQ 337
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
G Y + +I GR SA + E PF Y GSMAT+ R+ A+V L +
Sbjct: 338 GGAY---VAEQIAAEVEGR--SADERE---PFEYYDKGSMATVSRFNAVVKLGK------ 383
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+ + GF+ W +W +L +V +RNR A +W
Sbjct: 384 VEVTGFIGWAMWLCVHLMFLVGFRNRATAAFSW 416
>gi|300858432|ref|YP_003783415.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis FRC41]
gi|375288604|ref|YP_005123145.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis 3/99-5]
gi|379715306|ref|YP_005303643.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis 316]
gi|384504611|ref|YP_005681281.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis 1002]
gi|384506703|ref|YP_005683372.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis C231]
gi|384508790|ref|YP_005685458.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis I19]
gi|387136539|ref|YP_005692519.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis 42/02-A]
gi|387138607|ref|YP_005694586.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis CIP 52.97]
gi|387140605|ref|YP_005696583.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis 1/06-A]
gi|389850360|ref|YP_006352595.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis 258]
gi|300685886|gb|ADK28808.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis FRC41]
gi|302206143|gb|ADL10485.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis C231]
gi|302330700|gb|ADL20894.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis 1002]
gi|308276383|gb|ADO26282.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis I19]
gi|348606984|gb|AEP70257.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis 42/02-A]
gi|349735085|gb|AEQ06563.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis CIP 52.97]
gi|355392396|gb|AER69061.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis 1/06-A]
gi|371575893|gb|AEX39496.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis 3/99-5]
gi|377654012|gb|AFB72361.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis 316]
gi|388247666|gb|AFK16657.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis 258]
Length = 452
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 132/273 (48%), Gaps = 32/273 (11%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIE-ANEILSSFD 67
E+ RLL V+VG GPTGVE +G+L++ R + Y+ + LI+ A +IL F
Sbjct: 164 ERDRLLTFVIVGAGPTGVELAGQLAEMAHRTLAGEYTRFNPANAKIILIDGAPQILPPFG 223
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLL-----VWSTGVGPST 121
RL A +L K GV + + IV D+D + T+ + +WS GV S
Sbjct: 224 KRLGRNAQRELEKIGVTVKLNAIVTDLDEDSVTYKSTTDNSTHTINSFCKIWSAGVAASP 283
Query: 122 LVK----SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
L K L++ GR+ ++ L V S ++VF +GD LP +AQ A +
Sbjct: 284 LGKVLADQLEVEVDRAGRVPVNPDLSVGSDKNVFVIGDMMSL------NNLPGVAQTAIQ 337
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
G Y + +I GR SA + E PF Y GSMAT+ R+ A+V L +
Sbjct: 338 GGAY---VAEQIAAEVEGR--SADERE---PFEYYDKGSMATVSRFNAVVKLGK------ 383
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+ + GF+ W +W +L +V +RNR A +W
Sbjct: 384 VEVTGFIGWAMWLCVHLMFLVGFRNRATAAFSW 416
>gi|453074836|ref|ZP_21977626.1| NADH dehydrogenase [Rhodococcus triatomae BKS 15-14]
gi|452763785|gb|EME22060.1| NADH dehydrogenase [Rhodococcus triatomae BKS 15-14]
Length = 468
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 136/278 (48%), Gaps = 31/278 (11%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIE-ANEILSSF 66
EE++RLL VVVG GPTGVE +G++++ R + + + V L++ A +L +
Sbjct: 161 EERARLLTFVVVGAGPTGVELAGQIAELAHRTLEGAFRRIDPSEARVILLDGAPVVLPVY 220
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLIL--NDGT--EVPYGLLVWSTGVGPST 121
+L A +L K GV + +V DVD+ L + DGT V VWS GV S
Sbjct: 221 GGKLSESAAKRLEKLGVEIQPNAMVVDVDADGLTVKEKDGTIRRVDSQCKVWSAGVQASG 280
Query: 122 LVKSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
L K L + GR+ ++ L +P +V+ +GD L+S LP LAQVA +
Sbjct: 281 LGKQLAEQSGAEQDRAGRVHVNPDLSLPGYPNVYVIGDMMA-LDS-----LPGLAQVAMQ 334
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
GK+ + + E PF Y GSMATI R+ A+ + +
Sbjct: 335 GGKHAAKQIK--------ATIAGTPPEERPPFKYFDKGSMATISRFSAVAKVGK------ 380
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
L + GF+ WL+W +L +V +R++F ++W TF+
Sbjct: 381 LEITGFIGWLMWLVVHLMYLVGFRSKFSTVLSWTVTFL 418
>gi|372209870|ref|ZP_09497672.1| NADH dehydrogenase (ubiquinone) [Flavobacteriaceae bacterium S85]
Length = 435
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 131/271 (48%), Gaps = 20/271 (7%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSS 65
EE + LL+ V+VG GPTGVE +G +++F + Y + + + + L+E A+ +L
Sbjct: 154 EEVQRFLLNFVIVGAGPTGVELAGAIAEFKQSVLPLDYPDLNSELMQINLLEGADRVLPP 213
Query: 66 FDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
+ +T L + GV + IV + D + DG E L+WS GV + +
Sbjct: 214 MSEHASKKSTQFLKELGVEIHTNTIVTEYDGKLAKTKDGKEFASRTLIWSAGVIANRIDG 273
Query: 125 SLDLPKSP-GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
+ P R ++E+ +V +VFA+GD + P +AQ A +Q L
Sbjct: 274 FSEEASEPRSKRYYVNEFNQVKGYSNVFALGDVALMASKDYPRGHPQVAQPAIQQAVNLA 333
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
+I K K+++ PFVY GSMATIGR KA+ D+++ L GF
Sbjct: 334 KNFPKILKGN-------KNLK---PFVYNDKGSMATIGRNKAVADIKK------LKFGGF 377
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
+WL+W + +L +V ++NR + + W +
Sbjct: 378 FAWLIWMAVHLISLVGFKNRLVILITWIYNY 408
>gi|407278897|ref|ZP_11107367.1| NADH dehydrogenase [Rhodococcus sp. P14]
Length = 456
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 137/282 (48%), Gaps = 38/282 (13%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSF 66
E + LL VV+G G TGVE +G++ + R Q + + D + VTL+E A E L +F
Sbjct: 155 ERRRNLLSFVVIGAGATGVELAGQIKELAGRYFEQSFHDISADDVSVTLVEGAGEALPAF 214
Query: 67 DDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLIL----NDGTEVPYGLLVWSTGVGPS- 120
+L Y L KSGV +V V D+D L ++ + ++WS GV +
Sbjct: 215 GGKLSEYTKQSLQKSGVDVVLDTFVTDIDEHGATLKAKNDEERRITAETIIWSAGVRAND 274
Query: 121 ---TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
L + GR+ ++ L V DV+A+GD T LP + VA +
Sbjct: 275 FAGVLAERTGCATDRAGRLLVNPDLTVGGYADVYAIGDM------TSLNNLPGQSPVAMQ 328
Query: 178 QGKYLF-SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
G+++ ++L + GK G PF YR GSMA I R++A+ + +
Sbjct: 329 GGRHVARTILGKQGK--------------GTPFKYRDKGSMAIINRFRAITRVGK----- 369
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
+ L+GF++W++W + +L +V +RNR+ ++W +F+ R
Sbjct: 370 -IELSGFVAWVLWLAVHLVYMVGFRNRYVAVMSWFGSFLGHR 410
>gi|359422940|ref|ZP_09214086.1| NADH dehydrogenase [Gordonia amarae NBRC 15530]
gi|358241927|dbj|GAB03668.1| NADH dehydrogenase [Gordonia amarae NBRC 15530]
Length = 472
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 131/279 (46%), Gaps = 28/279 (10%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH--VTLIEANEILSSFD 67
E+ RLL VV+G GPTGVE +G++++ + ++ + ++ + + L A +L F
Sbjct: 155 ERERLLTFVVIGAGPTGVELAGQIAEMSDKTLKDAFRNIDATLARVILLDAAPAVLPPFG 214
Query: 68 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILN--DGT--EVPYGLLVWSTGVGPSTL 122
++L A +L K GV + G +V D+D L + DGT + VWS GV S L
Sbjct: 215 EKLGKKAAARLEKMGVEIQLGAMVVDLDYDSLTVKEKDGTTRRIESQCKVWSAGVQASPL 274
Query: 123 VKSL------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
K L +L ++ GR+ + L +P DVF VGD +P +AQ A
Sbjct: 275 GKQLAEQSGVELDRA--GRVKVGPDLSIPGHPDVFVVGDMMAV------DGVPGVAQGAI 326
Query: 177 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
+ G+Y + + + E PF Y GSMATI R+ A++ + K
Sbjct: 327 QGGRYAADAIK-------AELSKGQTPEQRKPFSYYDKGSMATISRFSAVMQVPIPGTKK 379
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
G+ +WL W + +L +V +RNR +NW F
Sbjct: 380 KFETEGYFAWLGWLALHLVYLVGFRNRLNTLINWFFAFT 418
>gi|383774975|ref|YP_005454044.1| NADH dehydrogenase [Bradyrhizobium sp. S23321]
gi|381363102|dbj|BAL79932.1| NADH dehydrogenase [Bradyrhizobium sp. S23321]
Length = 420
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 135/269 (50%), Gaps = 26/269 (9%)
Query: 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFDDRLRH 72
L V+VG GPTGVE +G +++ + + ++ V LIEA +L+ F D L
Sbjct: 159 LTFVIVGAGPTGVELAGTIAEMAHHTLPGDFRNIDTTKARVVLIEAGPRVLAGFPDDLSA 218
Query: 73 YATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 131
YA L + GV +V G V +++ + ++ G + +W+ GV S + L P
Sbjct: 219 YAQASLERIGVEVVLGQAVTEINREGVVFG-GKLLEAKTRIWAAGVRASPAAEWLGAPSD 277
Query: 132 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN-RIG 190
GR+ ++ L +P ++FA+GD GK V P +A A++QGK++ + R+
Sbjct: 278 RAGRVQVEADLTIPGHPEIFAIGDTVSIDAWEGKPV-PGIAPAAKQQGKHVAETIKARLR 336
Query: 191 KAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWR 250
A G PF Y+H GS+A IG+ A++D + K L G ++W +W
Sbjct: 337 GAATG------------PFRYKHAGSLAQIGKRLAVIDFGKVK------LRGTIAWWIWG 378
Query: 251 SAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
A++ ++ R+R VA++W +++ RD
Sbjct: 379 IAHIYFLIGLRHRLSVALSW--LWIYARD 405
>gi|239833783|ref|ZP_04682111.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Ochrobactrum intermedium LMG 3301]
gi|444310641|ref|ZP_21146261.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Ochrobactrum intermedium M86]
gi|239821846|gb|EEQ93415.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Ochrobactrum intermedium LMG 3301]
gi|443486002|gb|ELT48784.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Ochrobactrum intermedium M86]
Length = 422
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 142/279 (50%), Gaps = 21/279 (7%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSS 65
E ++ LL +VGGGPTGVE +G +++ + + + ++ V L+EA IL++
Sbjct: 153 EAKRKALLTFAIVGGGPTGVELAGIIAELAKQTIWPEFRNIDTRQTRVMLLEAGPRILAA 212
Query: 66 FDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
F + L YA L K GV + GI VKD+ ++ + + + +P +W+ GV S
Sbjct: 213 FPEDLSDYALRALEKLGVEVRLGIPVKDITAEGVTVGE-EFIPCRTAIWAAGVAASPAAT 271
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
L GR+ + L VP D+F +GD + GK V P +A A++QG Y+ +
Sbjct: 272 WLGAESDRAGRVKVLSNLNVPGHDDIFVIGDTAWVEGPDGKPV-PGIAPAAKQQGAYVAT 330
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
++ + + PF Y+H G++ATIGR A+VD+ + K L G +
Sbjct: 331 VIK----------SRIEGQTPPMPFRYKHQGNLATIGRGAAVVDMGRFK------LKGII 374
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 375 AWWFWGIAHIFFLIGTRSRAAVAWSWLWTYISGQHSARL 413
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRD--VRQRYSHVKD----YIHVTLIEA 59
+SEE R+ H VVVG G G++ +L + +R + QR H+ + T++
Sbjct: 1 MSEE---RVPHLVVVGAGFGGLQLIHDLKNVNVRITLIDQRNHHLFQPLLYQVATTILAT 57
Query: 60 NEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQK--LILNDGTEVPYGLLVWSTG 116
+EI R ++ V + G V DVD+++ + L +GTE+ Y +LV +TG
Sbjct: 58 SEIAWPIRHLFR-------DRTEVTTLLGTVTDVDTERRQVQLENGTEISYDMLVLATG 109
>gi|392400546|ref|YP_006437146.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis Cp162]
gi|390531624|gb|AFM07353.1| NADH dehydrogenase [Corynebacterium pseudotuberculosis Cp162]
Length = 452
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 132/273 (48%), Gaps = 32/273 (11%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIE-ANEILSSFD 67
E+ RLL V+VG GPTGVE +G+L++ R + Y+ + LI+ A +IL F
Sbjct: 164 ERDRLLTFVIVGAGPTGVELAGQLAEMAHRTLAGEYTRFNPANAKIILIDGAPQILPPFG 223
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLL-----VWSTGVGPST 121
RL A +L K GV + + IV D+D + T+ + +WS GV S
Sbjct: 224 KRLGRNAQRELEKIGVTVKLNAIVTDLDEDSVAYKSTTDNSTHTINSFCKIWSAGVAASP 283
Query: 122 LVK----SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
L K L++ GR+ ++ L V S ++VF +GD LP +AQ A +
Sbjct: 284 LGKVLADQLEVEVDRAGRVPVNPDLSVGSDKNVFVIGDMMSL------NNLPGVAQTAIQ 337
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
G Y + +I GR SA + E PF Y GSMAT+ R+ A+V L +
Sbjct: 338 GGAY---VAEQIAAEVEGR--SADERE---PFEYYDKGSMATVSRFNAVVKLGK------ 383
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+ + GF+ W +W +L +V +RNR A +W
Sbjct: 384 VEVTGFIGWAMWLCVHLMFLVGFRNRATAAFSW 416
>gi|159488552|ref|XP_001702271.1| mitochondrial NADH dehydrogenase [Chlamydomonas reinhardtii]
gi|158271248|gb|EDO97072.1| mitochondrial NADH dehydrogenase [Chlamydomonas reinhardtii]
Length = 591
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 117/212 (55%), Gaps = 23/212 (10%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L G SEE++ LH VVVGGGPTGVEF+G LSDF+ D++++Y + Y+ VTL++ A +
Sbjct: 158 LPGTSEEDRKAALHFVVVGGGPTGVEFAGTLSDFVREDLKKKYPALMKYVKVTLLQSAQQ 217
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRGI---------VKDVDSQKLILNDGTEVPYGLLV 112
IL+ FD L AT L SGV + G+ V V +++L G E+PYG+ V
Sbjct: 218 ILTQFDAGLGQRATEALESSGVEVRTGVRVVEITINKVMLVSDAQVLLKGGEELPYGVCV 277
Query: 113 WSTGVGPSTLVKSL---------DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST 163
WS G P LV + P ++ +D +LRV D+ A+GDCS L +
Sbjct: 278 WSAGNAPRPLVTQIASQVAEQAAAAEAPPNAKLCVDSFLRVVGATDLMALGDCSLVLGNR 337
Query: 164 GKTVLPALAQVAERQGKYLFSLLNRIGKAGGG 195
LP+ AQVA +QG YL L+N + G G
Sbjct: 338 ----LPSTAQVAGQQGAYLAHLINSQYQLGVG 365
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 208 PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVA 267
PF + LG MA +G KAL + + + L L G +++L+W+S Y+T+ VS+RNR +
Sbjct: 517 PFEFLSLGIMAYVGNDKALTQV-EAFDVINLKLYGSVAFLLWKSVYITKQVSFRNRVLIL 575
Query: 268 VNWATTFVFGRDIS 281
+W T VFGRDIS
Sbjct: 576 FDWMKTRVFGRDIS 589
>gi|452961853|gb|EME67152.1| NADH dehydrogenase [Rhodococcus ruber BKS 20-38]
Length = 456
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 137/282 (48%), Gaps = 38/282 (13%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSF 66
E + LL VV+G G TGVE +G++ + R Q + + D + VTL+E A E L +F
Sbjct: 155 ERRRNLLSFVVIGAGATGVELAGQIKELAGRYFEQSFHDISADDVSVTLVEGAGEALPAF 214
Query: 67 DDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLIL----NDGTEVPYGLLVWSTGVGPS- 120
+L Y L KSGV +V V D+D L ++ + ++WS GV +
Sbjct: 215 GGKLSEYTKQSLQKSGVDVVLDTFVTDIDEHGATLKAKNDEERRITAETIIWSAGVRAND 274
Query: 121 ---TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
L + GR+ ++ L V DV+A+GD T LP + VA +
Sbjct: 275 FAGVLAERTGCATDRAGRLLVNPDLTVGGYADVYAIGDM------TSLNNLPGQSPVAMQ 328
Query: 178 QGKYLF-SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
G+++ ++L + GK G PF YR GSMA I R++A+ + +
Sbjct: 329 GGRHVARTILGKQGK--------------GTPFKYRDKGSMAIINRFRAITRVGK----- 369
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
+ L+GF++W++W + +L +V +RNR+ ++W +F+ R
Sbjct: 370 -IELSGFVAWVLWLAVHLVYMVGFRNRYVAVMSWFGSFLGHR 410
>gi|451944166|ref|YP_007464802.1| NADH dehydrogenase [Corynebacterium halotolerans YIM 70093 = DSM
44683]
gi|451903553|gb|AGF72440.1| NADH dehydrogenase [Corynebacterium halotolerans YIM 70093 = DSM
44683]
Length = 474
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 136/273 (49%), Gaps = 32/273 (11%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSFD 67
E+ RLL V+VG GPTGVE +G+L++ R + YS+ + L++ A ++L F
Sbjct: 164 ERERLLTFVIVGAGPTGVELAGQLAELANRTLAGEYSNFSPSAAKIILLDGAPQVLPPFG 223
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTEVPYGLL-VWSTGVGPST 121
RL A QL K GV + + +V DVD + K ++D +WS GV S
Sbjct: 224 KRLGRNAQRQLEKLGVTVKLNALVTDVDEKAVTYKSTIDDSEHTINAFTKIWSAGVAASP 283
Query: 122 LVK----SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
L K GR+ ++ L V ++VF VGD L++ LP +AQ A +
Sbjct: 284 LGKLVADQAGAEVDRAGRVKVNPDLSVGEHKNVFVVGDMIA-LDN-----LPGVAQTAIQ 337
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
G+Y +I + GGR+ A+ +PF Y GSMA + R+ A+V + +
Sbjct: 338 GGEY---AAEQIAEEVGGRSVDAR-----EPFDYFDKGSMAIVSRFSAVVKMGK------ 383
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+ + GF+ W++W ++ +V +RNRF +NW
Sbjct: 384 VEVTGFIGWVLWLVVHMMFLVGFRNRFISMLNW 416
>gi|319954371|ref|YP_004165638.1| NADH dehydrogenase (ubiquinone) [Cellulophaga algicola DSM 14237]
gi|319423031|gb|ADV50140.1| NADH dehydrogenase (ubiquinone) [Cellulophaga algicola DSM 14237]
Length = 439
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 136/279 (48%), Gaps = 32/279 (11%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEA-NEILSSFDD 68
+ L++ V+VGGGPTGVE +G L++ + + Y + + + L+++ + IL +
Sbjct: 166 RDALMNFVIVGGGPTGVELAGALAEIKKGILPKDYPDLDTRRVQINLVQSGDRILKEMSE 225
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
+ A L + GV++ + VK D + + LVW+ GV + +K LD
Sbjct: 226 KASKKAEDFLEELGVQVWKNTRVKSYDGKLVTTQTDLSFEAATLVWAAGVKGAA-IKGLD 284
Query: 128 LPK--SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
+ G RI ++E+ +V +++FAVGD +G + P +AQ A +QGK L
Sbjct: 285 AEELLMRGNRIKVNEFNQVIGHENIFAVGDVAGMELPDYPSGHPMMAQPAMQQGKNLGKN 344
Query: 186 LNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
L + LG+ PF+Y GSMATIGR KA+VDL K
Sbjct: 345 LTYL---------------LGNKPLKPFIYNDKGSMATIGRNKAVVDLDAYK------FQ 383
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRD 279
G +W VW +L ++ +RNR V +NW +V F R+
Sbjct: 384 GIFAWFVWMFVHLFFLIGFRNRMIVFINWVYNYVRFDRE 422
>gi|384106148|ref|ZP_10007058.1| NADH dehydrogenase [Rhodococcus imtechensis RKJ300]
gi|419962353|ref|ZP_14478346.1| NADH dehydrogenase [Rhodococcus opacus M213]
gi|432343463|ref|ZP_19592635.1| NADH dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
gi|383834339|gb|EID73781.1| NADH dehydrogenase [Rhodococcus imtechensis RKJ300]
gi|414572300|gb|EKT83000.1| NADH dehydrogenase [Rhodococcus opacus M213]
gi|430771507|gb|ELB87363.1| NADH dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
Length = 464
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 139/277 (50%), Gaps = 31/277 (11%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSFD 67
E++RLL VVVG GPTGVE +G++++ R + + ++ ++ + L A+++L +
Sbjct: 162 ERARLLTFVVVGAGPTGVELAGQIAELSRRTLSGAFRNIDPREARVILLDGADDVLPVYG 221
Query: 68 DRLRHYATTQLSKSGVRLVRGIV---KDVDSQKLILNDGTE--VPYGLLVWSTGVGPSTL 122
+L A QL K G+ + G + DVD + DGT+ + VWS GV S L
Sbjct: 222 GKLSRKARQQLEKLGIEIQLGAMVVDVDVDGLVVKDKDGTQRRIESQCKVWSAGVQASPL 281
Query: 123 VKSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 178
K + D GR+ ++ L VP +VF +GD + LP LAQVA +
Sbjct: 282 GKQIAEQSDAEIDRAGRVLVNPDLSVPGHPEVFVIGDMMALDK------LPGLAQVAMQG 335
Query: 179 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 238
GKY + KAG S + E PF Y GSMATI R+ A+ + + L
Sbjct: 336 GKYAAKQI----KAG----LSGQKPEDRPPFKYFDKGSMATISRFSAVAKVGK------L 381
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
++GF+ W+ W + +L +V +R+R ++W TF+
Sbjct: 382 EISGFIGWVAWLAIHLMYLVGFRSRLSTLLSWTVTFL 418
>gi|403216912|emb|CCK71408.1| hypothetical protein KNAG_0G03500 [Kazachstania naganishii CBS
8797]
Length = 566
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 154/295 (52%), Gaps = 31/295 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSF 66
+ E+ RLL VVVGGGPTGVE +GEL D++ +++++ + + + L+EA I L+ F
Sbjct: 275 DPERKRLLSIVVVGGGPTGVETAGELQDYVTQELQKFLPSLAKEVQIHLVEALPIVLNMF 334
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILN----DGT----EVPYGLLVWSTGV 117
+ +L YA L K+ ++L +R V V+ + L DGT ++PYG L+W+TG
Sbjct: 335 EKKLSSYAQEVLEKTSIKLHLRTAVSKVEEKHLTAKTKHADGTVTEQQIPYGTLIWATGN 394
Query: 118 GPSTLVKSL--DLP--KSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
+ K L +P K+ + ++ +L V ++FAVGD + ++ LP AQ
Sbjct: 395 KMRAIAKDLTTKIPEQKNSTRALTVNPFLLVKGSNNIFAVGD-NAFIG------LPPTAQ 447
Query: 174 VAERQGKYL---FSLLNRIGKAGGGRANSAKDMEL------GDPFVYRHLGSMATIGRYK 224
VA ++ +YL F + RI N ++L PF Y H G++A +G K
Sbjct: 448 VAHQEAEYLCKVFDKMARIPDFHQTLKNRTDKVDLLFEENKFKPFKYIHYGALAYLGAEK 507
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
A+ ++ K + + G ++ VWR YL+ ++S R RF V ++W F RD
Sbjct: 508 AIANITYGKRNL-YTGGGIFTFYVWRLVYLSMLLSARTRFKVIIDWMKITFFKRD 561
>gi|384212993|ref|YP_005602076.1| NADH dehydrogenase [Brucella melitensis M5-90]
gi|384410094|ref|YP_005598714.1| NADH dehydrogenase [Brucella melitensis M28]
gi|326410641|gb|ADZ67705.1| NADH dehydrogenase [Brucella melitensis M28]
gi|326553933|gb|ADZ88572.1| NADH dehydrogenase [Brucella melitensis M5-90]
Length = 441
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 142/276 (51%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VGGGPTGVE +G +++ R + + ++ V L+E ILS+F +
Sbjct: 173 RQALLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEVGPRILSAFPE 232
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 233 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 291
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 292 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR 350
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 351 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 394
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 395 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 430
>gi|312139795|ref|YP_004007131.1| NADH dehydrogenase [Rhodococcus equi 103S]
gi|325676753|ref|ZP_08156426.1| NADH dehydrogenase [Rhodococcus equi ATCC 33707]
gi|311889134|emb|CBH48447.1| putative secreted NADH dehydrogenase [Rhodococcus equi 103S]
gi|325552301|gb|EGD21990.1| NADH dehydrogenase [Rhodococcus equi ATCC 33707]
Length = 457
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 138/278 (49%), Gaps = 31/278 (11%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV--KDYIHVTLIEANEILSSF 66
EE+ RLL VVVG GPTGVE +G++++ R + + + +D + + A +L +
Sbjct: 161 EERRRLLTFVVVGAGPTGVEMAGQIAELANRTLAGAFRRIDPRDARVILVDGAPAVLPVY 220
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG----TEVPYGLLVWSTGVGPST 121
+L A +L K GV + + +V +VD L++ D T + VWS GV S
Sbjct: 221 GGKLSRKAAERLEKLGVEIQLNAMVTNVDVNGLVVKDKDGNETRIEAQCKVWSAGVQASP 280
Query: 122 LVKSLDLPKSP----GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
L + L GR+ ++ L +P +VF +GD + S K LP LAQVA +
Sbjct: 281 LGRQLGEQTGAEVDRAGRVHVNPDLTLPGYPNVFVIGD----MMSLDK--LPGLAQVAMQ 334
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
GKY + R G G +D + PF Y GSMATI R+ A+ + +
Sbjct: 335 GGKYAAKEI-RAGLDGA----QPQDRQ---PFKYFDKGSMATISRHSAVAKVGK------ 380
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
L ++GF+ W++W +L ++ +R+R ++W +F+
Sbjct: 381 LEISGFIGWIMWLVIHLMYLIGFRSRLSTVISWTVSFL 418
>gi|225686280|ref|YP_002734252.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Brucella melitensis ATCC 23457]
gi|256262582|ref|ZP_05465114.1| NADH dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
gi|260564584|ref|ZP_05835069.1| NADH dehydrogenase [Brucella melitensis bv. 1 str. 16M]
gi|265989799|ref|ZP_06102356.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella melitensis bv. 1 str. Rev.1]
gi|265993092|ref|ZP_06105649.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella melitensis bv. 3 str. Ether]
gi|384446619|ref|YP_005660837.1| NADH dehydrogenase [Brucella melitensis NI]
gi|225642385|gb|ACO02298.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella melitensis ATCC 23457]
gi|260152227|gb|EEW87320.1| NADH dehydrogenase [Brucella melitensis bv. 1 str. 16M]
gi|262763962|gb|EEZ09994.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella melitensis bv. 3 str. Ether]
gi|263000468|gb|EEZ13158.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Brucella melitensis bv. 1 str. Rev.1]
gi|263092367|gb|EEZ16620.1| NADH dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
gi|349744616|gb|AEQ10158.1| NADH dehydrogenase [Brucella melitensis NI]
Length = 424
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 142/276 (51%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VGGGPTGVE +G +++ R + + ++ V L+E ILS+F +
Sbjct: 156 RQALLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEVGPRILSAFPE 215
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 216 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 274
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 275 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR 333
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 334 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 377
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 378 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 413
>gi|189465790|ref|ZP_03014575.1| hypothetical protein BACINT_02152 [Bacteroides intestinalis DSM
17393]
gi|189434054|gb|EDV03039.1| pyridine nucleotide-disulfide oxidoreductase [Bacteroides
intestinalis DSM 17393]
Length = 430
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 134/269 (49%), Gaps = 20/269 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSF 66
E + RL+ V+VGGG TG+E SG L++ + Q Y + + + + L++ A +LS+F
Sbjct: 160 ETRKRLMTFVIVGGGATGIELSGALAEMKKFVLPQDYPDLDMNLMRIILVDGALRLLSAF 219
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
++ L K V ++ + V + ++ + L+D + + + W GV +++
Sbjct: 220 SEKSSEEVANYLLKRDVEIITSVQVTNYENGTMTLSDNSTLETMNVFWVAGVRANSIEGL 279
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
+ PG R+ +D + V ++FA+GD + + P + Q A +Q + L
Sbjct: 280 AEEAYGPGNRLLVDLYNCVQGYNNIFAIGDTALMISKEYPKGHPQVVQPAIQQARNLIQN 339
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
L+R + +E+ PFVY + GSMATIGR A+V+L K L GF +
Sbjct: 340 LDR----------KERGLEM-QPFVYHNKGSMATIGRNHAVVEL------KNLRFGGFPA 382
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
W VW +L +V +NR ++ V+W ++
Sbjct: 383 WAVWLFIHLMSIVGVKNRLFIFVDWMWSY 411
>gi|386399050|ref|ZP_10083828.1| NADH dehydrogenase, FAD-containing subunit [Bradyrhizobium sp.
WSM1253]
gi|385739676|gb|EIG59872.1| NADH dehydrogenase, FAD-containing subunit [Bradyrhizobium sp.
WSM1253]
Length = 420
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 136/273 (49%), Gaps = 24/273 (8%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFD 67
+++ L V+VG GPTGVE +G +++ + + ++ + V LIEA +L+ F
Sbjct: 154 KRAARLTFVIVGAGPTGVELAGTIAEMAHHTLPADFRNIDTNKARVVLIEAGPRVLAGFP 213
Query: 68 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
D L YA L K GV +V G V ++D ++ G + +W+ GV S + L
Sbjct: 214 DDLSAYAQASLEKIGVEVVLGQAVTEIDRDGVVFG-GERLDAKTKIWAAGVRASPAAEWL 272
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
P GR+ ++ L +P ++FA+GD GK V P +A A++QG+++ +
Sbjct: 273 GAPADRAGRVQVEADLTIPGHPEIFAIGDTVLINAWDGKPV-PGIAPAAKQQGRHVAETI 331
Query: 187 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
+ E PF Y+H GS+A IG+ A++D + K L G ++W
Sbjct: 332 K-----------ARLRQEPTGPFRYKHSGSLAQIGKRLAVIDFGRIK------LRGTIAW 374
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
+W A++ ++ R+R VA++W +++ RD
Sbjct: 375 WIWGIAHIYFLIGLRHRLSVALSW--LWIYARD 405
>gi|400288306|ref|ZP_10790338.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Psychrobacter sp. PAMC 21119]
Length = 444
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 135/287 (47%), Gaps = 27/287 (9%)
Query: 2 FLAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH-VTLIEAN 60
+ A + EE+ L V+ GGGP+GVE +G +S+ + + + Y + + + +TL+ A+
Sbjct: 159 YAASLPVEEREPYLSIVIAGGGPSGVELAGVMSEIRLYTLHKEYPELLENVGGITLVTAD 218
Query: 61 EIL-SSFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVG 118
+L + + Y Q+ K V LV V D + L G + L+W+ GV
Sbjct: 219 PVLLAPMSAEAQRYTQLQMEKFNVDLVFSDPVARYDGHIVTLKSGKTLHTHNLIWTAGVT 278
Query: 119 PSTLVKSLDLPK-SPGGRIGIDEWLRVPSVQDVFAVGDCS-GYLESTGKTVLPALAQVAE 176
+ L++ G R+ +D L + + +D++A+GD + + P L QVA
Sbjct: 279 CEP-INGLNVDDYGRGNRLMVDAHLALINHKDIYALGDIALATHDDHYPNGHPQLGQVAS 337
Query: 177 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
QG YL G+ S K +E PF Y+H G MA IGR A+ D+ K
Sbjct: 338 SQGTYL------------GKYLSDKTVE---PFQYKHSGDMAMIGRLTAVADI------K 376
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
G+ L G ++WL W ++ + + +NR NW T F+ G R+
Sbjct: 377 GMHLKGIIAWLAWVVIHILSLSTAKNRLATTWNWMTAFLTGNQSFRM 423
>gi|375093904|ref|ZP_09740169.1| NADH dehydrogenase, FAD-containing subunit [Saccharomonospora
marina XMU15]
gi|374654637|gb|EHR49470.1| NADH dehydrogenase, FAD-containing subunit [Saccharomonospora
marina XMU15]
Length = 435
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 129/275 (46%), Gaps = 21/275 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSSF 66
E + R L V VGGG TGVE EL D + DV + Y + + L+EA + IL++
Sbjct: 155 ELRKRALTFVFVGGGYTGVEAIAELQDMAI-DVLEGYPELDASEMRWVLVEAMDRILTTV 213
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
L A T+L+ G+ + G ++ V+ +L L+DG++ LVW G P ++V
Sbjct: 214 SRELADRAMTELTGRGIDIRLGTQLESVEEGELRLSDGSKFFSDTLVWVAGTRPQSIVGE 273
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
L LP GR+ +D+ +RV ++A GDC+ + V P AQ A RQ + L
Sbjct: 274 LGLPVDGRGRLVVDQAMRVEGHPGIWAAGDCAAVPDREAGGVSPPTAQHAVRQAEQL--- 330
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
G + E PF YR G T+G+ KA+ E+ G G L+
Sbjct: 331 --------GDNLVATMRGEWPRPFKYRSRGEFVTLGKNKAV------GEAFGREFDGALA 376
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
W + R+ Y T++ +W V +W FG D+
Sbjct: 377 WTLRRAYYATQIPTWNRTIRVLGDWLVGMPFGHDV 411
>gi|225872948|ref|YP_002754405.1| pyridine nucleotide-disulfide oxidoreductase [Acidobacterium
capsulatum ATCC 51196]
gi|225794009|gb|ACO34099.1| pyridine nucleotide-disulfide oxidoreductase [Acidobacterium
capsulatum ATCC 51196]
Length = 422
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 138/278 (49%), Gaps = 22/278 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIE-ANEILSSF 66
E++ LL V+VG GPTGVE + ++ I ++ + + + + L+E ++ +L +F
Sbjct: 156 EQRQSLLTFVLVGAGPTGVEMASAIAVLIQSTLKSDFRRMDPAMARIILVERSDRVLDNF 215
Query: 67 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
D RL A +L GV L+ G V+++D + ++ G + ++W+ GV PS
Sbjct: 216 DPRLSMAAQRRLQSLGVELMLGQTVEEIDDTGVTIH-GQHIAARTVIWAAGVAPSPAGDW 274
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
L GR+ + L VP++ +VF VGD + + E G LP +AQVA +QG+Y +
Sbjct: 275 LKAETDKSGRVLVHRDLSVPNLPEVFVVGD-TAHFEQNGHP-LPGVAQVAIQQGQYAARV 332
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
+ A +D F Y G++A GR A++ +S + L+GF +
Sbjct: 333 I----------AARVEDAPFAPMFRYLDKGNLAVAGRGFAVL------QSDKIKLSGFWA 376
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W +W + +L + R V+V W TF+ + SR+
Sbjct: 377 WWIWAAVHLRFLAGNNLRLSVSVQWMWTFLTAQRGSRL 414
>gi|117921561|ref|YP_870753.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Shewanella sp. ANA-3]
gi|117613893|gb|ABK49347.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Shewanella sp. ANA-3]
Length = 429
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 127/246 (51%), Gaps = 18/246 (7%)
Query: 19 VVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDRLRHYATT 76
+VG G TGVE + EL I Y ++ K ++ V LIEA+ +IL +R+ A
Sbjct: 170 IVGAGATGVELAAELHHVIESVKEYGYLNISKHHLDVHLIEASPKILPQLPERVSARAQA 229
Query: 77 QLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGV-GPSTLVKSLDLPKSPGG 134
L K G+RL G+ VK+V I DG + GL VW+ GV GP LP +P
Sbjct: 230 VLDKIGIRLHIGVQVKEVTRDGFITQDGDVIEAGLKVWAAGVKGPKAFQNFSKLPITPRN 289
Query: 135 RIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF-SLLNRIGKAG 193
++ +D +RV QD++A+GDC+ + +G+ V P AQ A + L+ +++NR+
Sbjct: 290 QVEVDACMRVKGHQDIYALGDCALLILESGQPV-PPRAQAAAQMADTLYENIVNRL---- 344
Query: 194 GGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAY 253
G+A PFVY+ GS+ ++ R+ A+ +L N S + G ++ +++ S Y
Sbjct: 345 QGKAEK--------PFVYKDYGSLVSLSRFSAVGNLMGNLRSGTFFVEGHIARIMYISLY 396
Query: 254 LTRVVS 259
+ S
Sbjct: 397 QRHLAS 402
>gi|17989131|ref|NP_541764.1| NADH dehydrogenase [Brucella melitensis bv. 1 str. 16M]
gi|17984981|gb|AAL54028.1| NADH dehydrogenase [Brucella melitensis bv. 1 str. 16M]
Length = 441
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 142/276 (51%), Gaps = 21/276 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDD 68
+ LL +VGGGPTGVE +G +++ R + + ++ V L+E ILS+F +
Sbjct: 173 RQALLTFSIVGGGPTGVELAGIIAELARRTLWPEFRNIDTRQARVLLLEVGPRILSAFPE 232
Query: 69 RLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127
L YA L K GV + GI VKD+ + + + D +P VW+ GV S LD
Sbjct: 233 DLSAYARRALEKLGVEVRLGIPVKDITQEGVTVGD-EFIPCHTTVWAAGVAASPAALWLD 291
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
GR+ + L VP +D+FA+GD + ++E +P +A A++QG Y+ ++
Sbjct: 292 AESDRAGRVKVLSNLSVPGHEDIFAIGDTA-WVEGDDGRPVPGIAPAAKQQGAYVAKVIR 350
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
+ ++ PF Y+H G++ATIG+ A+VD+ + + L G ++W
Sbjct: 351 ----------SRVENKTPPLPFRYKHQGNLATIGKGAAVVDMGR------IRLKGTIAWW 394
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W A++ ++ R+R VA +W T++ G+ +R+
Sbjct: 395 FWGIAHIFFLIGTRSRAAVAWSWLWTYITGQHSARL 430
>gi|402846248|ref|ZP_10894563.1| pyridine nucleotide-disulfide oxidoreductase [Porphyromonas sp.
oral taxon 279 str. F0450]
gi|402268326|gb|EJU17707.1| pyridine nucleotide-disulfide oxidoreductase [Porphyromonas sp.
oral taxon 279 str. F0450]
Length = 444
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 145/275 (52%), Gaps = 27/275 (9%)
Query: 4 AGISEEEKSR--LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN 60
A +S+ ++R LL V+VGGGP+GVE +G L++ + + Y +++ D + LI+A+
Sbjct: 150 ALVSDNPQTREALLTVVIVGGGPSGVEIAGALAEMKRYVLPKDYPYMETDQFKIHLIDAS 209
Query: 61 -EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVG 118
+L + ++ A L+ GV + + V D D + L L DGT++ ++W +G+
Sbjct: 210 PRLLQAMSEKSSRTAAEGLTSLGVEIHHNMMVTDYDGRVLTLGDGTKMNTRTVIWVSGIV 269
Query: 119 PSTL--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVA 175
+T+ +++ L + G RI +D + + V DVFA+GD C + P +AQVA
Sbjct: 270 ANTVEGIQADSLGR--GKRILVDGYNELQGVPDVFALGDQCLMTADPAYPQGHPQMAQVA 327
Query: 176 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 235
+Q L N + GG+ + F Y+ LGSMATIGR +A+ ++ + K
Sbjct: 328 IQQAALLAK--NLKARLTGGKQQT---------FRYKDLGSMATIGRNRAVAEIGKAK-- 374
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
GF +WL+W +L ++S RN+ V +NW
Sbjct: 375 ----WGGFTAWLLWLVVHLRSILSVRNKVIVLLNW 405
>gi|375099282|ref|ZP_09745545.1| NADH dehydrogenase, FAD-containing subunit [Saccharomonospora
cyanea NA-134]
gi|374660014|gb|EHR59892.1| NADH dehydrogenase, FAD-containing subunit [Saccharomonospora
cyanea NA-134]
Length = 432
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 135/281 (48%), Gaps = 23/281 (8%)
Query: 4 AGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NE 61
A E + L V VGGG TGVE EL D + DV + Y V + + L+EA +
Sbjct: 150 ATTDPEVRRSALTFVFVGGGYTGVEAVAELQDMAV-DVLEGYPEVDRSEMRWILVEAMDR 208
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120
IL + L ATT+L+ G+ + G +++ ++ L L+DGT++ LVW G P
Sbjct: 209 ILGTVSADLAELATTELTARGIDIRTGTLLESAENGVLQLSDGTKLSSDTLVWVAGTRPQ 268
Query: 121 TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGK 180
T++ L LP GR+ +D+ +RV ++++ GDC+ + P AQ A RQ +
Sbjct: 269 TIIGELGLPVDDRGRLVVDDTMRVHGQPNIWSAGDCAAVPDPEKGGTCPPTAQHAVRQAQ 328
Query: 181 YL-FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
L +LL + R ++ K PF Y G T+G+ KA+ E G
Sbjct: 329 QLGENLLLTL------RGHAVK------PFRYNSRGEFVTLGKNKAV------GEVLGHK 370
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
+ G L+W + R+ Y T++ +W V +W FG D+
Sbjct: 371 VDGTLAWTLRRAYYATQIPTWNRTVRVLGDWVVGMPFGHDV 411
>gi|258510842|ref|YP_003184276.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|257477568|gb|ACV57887.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
Length = 393
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 121/228 (53%), Gaps = 15/228 (6%)
Query: 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHY 73
L +V GGG TGVE GE +D++ + VR+ + D +H+ LI A+ EIL D +LR
Sbjct: 149 LKVLVAGGGLTGVELMGEWADWLPKRVRELGLPLTD-LHLGLIHAHAEILPDVDHQLRAV 207
Query: 74 ATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSP 132
A +L + GV L+ V + Q +L G ++ G LVW+ GV L+K LP
Sbjct: 208 AQAKLVERGVELILNERVAGAEPQAYLLASGRKLEAGTLVWTGGVEAPALLKEAGLPVDA 267
Query: 133 GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKA 192
R+ +DE+L V DV+ +GDC+ + ++ G VLP QVAE+ G +L + L R
Sbjct: 268 RNRVDVDEFLMARGVADVYVIGDCARFADAHGN-VLPPTGQVAEQMGHHLGANLVR---- 322
Query: 193 GGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 240
RA+ + PFVYR G +A++G + ++ ++ + +L
Sbjct: 323 ---RAHGRPPL----PFVYRDHGMVASLGPRYGVAEIGRHHATGATAL 363
>gi|225447633|ref|XP_002274469.1| PREDICTED: external NADH-ubiquinone oxidoreductase 2, mitochondrial
[Vitis vinifera]
gi|296084969|emb|CBI28384.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 99/165 (60%), Gaps = 9/165 (5%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L +++EE+ R LH V+VGGGPTGVEF+ EL DFI+ D+ + Y VKD + +T+I++ +
Sbjct: 209 LPDLTDEERRRNLHFVIVGGGPTGVEFAAELHDFILEDLVKLYPMVKDLVKITVIQSGDH 268
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILN-----DGTEVPYGLLVWST 115
IL+ FD+R+ +A + + G+ + G V V + + + + VPYG++VWST
Sbjct: 269 ILNMFDERISSFAERKFGRDGIEVQTGCRVTGVSDKAMTVKVKSKGEICSVPYGMVVWST 328
Query: 116 GVGPSTLVKSL--DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSG 158
G+ +++ + ++ + +EWLRV V+A+GDC+
Sbjct: 329 GIVTRPVLRDFMDQIGQNKRHVLTTNEWLRVEGCDGVYALGDCAA 373
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 168 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD----PFVYRHLGSMATIGRY 223
LPA AQVA +QG YL S +R + + + G PF Y+HLG A +G
Sbjct: 463 LPATAQVAAQQGAYLSSCFSRRQQCQETPEGPLRFRDSGRHHFRPFRYKHLGQFAPLGGE 522
Query: 224 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+A +L + S G S WL W S Y ++ VSWR RF V +W F+FGRD SRI
Sbjct: 523 QAAAELPGDWVSIGHST----QWL-WYSVYASKQVSWRTRFLVVSDWTRRFIFGRDSSRI 577
>gi|224539876|ref|ZP_03680415.1| hypothetical protein BACCELL_04786 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518492|gb|EEF87597.1| hypothetical protein BACCELL_04786 [Bacteroides cellulosilyticus
DSM 14838]
Length = 465
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 134/269 (49%), Gaps = 20/269 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSF 66
E++ RL+ V+VGGG TG+E SG L++ + Q Y + + + + L++ A +LS+F
Sbjct: 195 EKRKRLMTFVIVGGGATGIELSGALAEMKKFVLPQDYPDLDMNLMRIVLVDGAPRLLSAF 254
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
++ L K V ++ + V + ++ + L+D + + + W GV +++
Sbjct: 255 SEKSSEEVANYLLKRDVEIITSVQVTNYENGIMTLSDNSTLEAMNVFWVAGVRANSIEGL 314
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
PG R+ +D + V ++FA+GD + + P + Q A +Q + L
Sbjct: 315 AKEAYGPGNRLLVDLYNCVQGYNNIFAIGDTALMISKEYPKGHPQVVQPAIQQARNLIQN 374
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
L+R + +E+ PFVY + GSMATIGR A+V+L K L GF +
Sbjct: 375 LDR----------KERGLEM-QPFVYHNKGSMATIGRNHAVVEL------KNLRFGGFPA 417
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
W VW +L +V +NR ++ V+W ++
Sbjct: 418 WAVWLFIHLMSIVGVKNRLFIFVDWMWSY 446
>gi|114048517|ref|YP_739067.1| NADH dehydrogenase [Shewanella sp. MR-7]
gi|113889959|gb|ABI44010.1| NADH dehydrogenase [Shewanella sp. MR-7]
Length = 429
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 127/246 (51%), Gaps = 18/246 (7%)
Query: 19 VVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDRLRHYATT 76
+VG G TGVE + EL I Y ++ K ++ V LIEA+ +IL +R+ A
Sbjct: 170 IVGAGATGVELAAELHHVIESVKEYGYLNISKHHLDVHLIEASPKILPQLPERVSARAQA 229
Query: 77 QLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGV-GPSTLVKSLDLPKSPGG 134
L K G+RL G+ VK+V I DG + GL VW+ GV GP LP +P
Sbjct: 230 VLDKIGIRLHIGVQVKEVTRDGFITQDGDVIEAGLKVWAAGVKGPKAFQNFSKLPITPRN 289
Query: 135 RIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF-SLLNRIGKAG 193
++ +D +RV QD++A+GDC+ + +G+ V P AQ A + L+ +++NR+
Sbjct: 290 QVEVDACMRVKGHQDIYALGDCALLILESGQPV-PPRAQAAAQMADTLYENIVNRL---- 344
Query: 194 GGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAY 253
G+A PFVY+ GS+ ++ R+ A+ +L N S + G ++ +++ S Y
Sbjct: 345 QGKAEK--------PFVYKDYGSLVSLSRFSAVGNLMGNLRSGTFFVEGHIARIMYISLY 396
Query: 254 LTRVVS 259
+ S
Sbjct: 397 QRHLAS 402
>gi|349580169|dbj|GAA25329.1| K7_Ndi1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 513
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 156/296 (52%), Gaps = 31/296 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSF 66
+ E+ RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + + L+EA I L+ F
Sbjct: 222 DPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMF 281
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLVWSTGV 117
+ +L YA + L + +++ +R V V+ ++L+ E +PYG L+W+TG
Sbjct: 282 EKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGN 341
Query: 118 GPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
++ L +P+ + ++++L+V ++FA+GD + LP AQ
Sbjct: 342 KARPVITDLFKKIPEQNSSTRGLAVNDFLQVKGSNNIFAIGDNAF-------AGLPPTAQ 394
Query: 174 VAERQGKYLFSLLNRIGKAGGGRAN--SAKD-----MELGD--PFVYRHLGSMATIGRYK 224
VA ++ +YL +++ + + N S KD E + PF Y LG++A +G +
Sbjct: 395 VAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFEENNFKPFKYNDLGALAYLGSER 454
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
A+ +R K + + G +++ +WR YL+ ++S R+R V +W F RD
Sbjct: 455 AIATIRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDF 509
>gi|120599888|ref|YP_964462.1| NADH dehydrogenase [Shewanella sp. W3-18-1]
gi|146292175|ref|YP_001182599.1| NADH dehydrogenase [Shewanella putrefaciens CN-32]
gi|386312846|ref|YP_006009011.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Shewanella putrefaciens 200]
gi|120559981|gb|ABM25908.1| NADH dehydrogenase [Shewanella sp. W3-18-1]
gi|145563865|gb|ABP74800.1| NADH dehydrogenase [Shewanella putrefaciens CN-32]
gi|319425471|gb|ADV53545.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Shewanella putrefaciens 200]
Length = 429
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 127/246 (51%), Gaps = 18/246 (7%)
Query: 19 VVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDRLRHYATT 76
+VG G TGVE + EL I Y ++ K+++ V LIEA+ +IL +R+ A
Sbjct: 170 IVGAGATGVELAAELHHVIESVKEYGYLNISKNHLDVHLIEASPKILPQLSERVSARAQA 229
Query: 77 QLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGV-GPSTLVKSLDLPKSPGG 134
L K G+RL G+ VK+V + I DG + GL VW+ GV GP LP +P
Sbjct: 230 VLDKIGIRLHIGVQVKEVTREGFITQDGDVIEAGLKVWAAGVKGPKAFQNFTKLPITPRN 289
Query: 135 RIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF-SLLNRIGKAG 193
++ +D +RV D++A+GDC+ ++ +G+ V P AQ A + LF +++NR+
Sbjct: 290 QVEVDACMRVKGQIDIYALGDCALLIQDSGQPV-PPRAQAAAQMADTLFDNIVNRLQD-- 346
Query: 194 GGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAY 253
+ PFVY+ GS+ ++ R+ A+ +L N S + G ++ +++ S Y
Sbjct: 347 ----------KPEKPFVYKDYGSLVSLSRFSAVGNLMGNLRSGTFFVEGHIARIMYISLY 396
Query: 254 LTRVVS 259
+ S
Sbjct: 397 QRHLAS 402
>gi|27376162|ref|NP_767691.1| NADH dehydrogenase [Bradyrhizobium japonicum USDA 110]
gi|27349301|dbj|BAC46316.1| NADH dehydrogenase [Bradyrhizobium japonicum USDA 110]
Length = 433
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 137/273 (50%), Gaps = 24/273 (8%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEAN-EILSSFD 67
+++ L V+VG GPTGVE +G +++ + + + ++ V LIEA +L+ F
Sbjct: 166 KRAARLTFVIVGAGPTGVELAGTIAEMAHHTLPEDFRNIDTTKARVVLIEAGPRVLAGFA 225
Query: 68 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
D L YA L K GV +V G V ++D ++ GT + +W+ GV S + L
Sbjct: 226 DELSAYAQASLEKIGVEVVLGQPVTEIDRDGVVYG-GTRLDAKTKIWAAGVRASPAAEWL 284
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
+P GR+ ++ L +P ++FA+GD GK V P +A A++QG+++ +
Sbjct: 285 GVPADRAGRVQVEADLTIPGHPEIFAIGDTVTISAWEGKPV-PGIAPAAKQQGRHVAETV 343
Query: 187 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
+ E F Y+H GS+A IG+ A++D + K L G ++W
Sbjct: 344 KARLRG-----------ETKGAFRYKHSGSLAQIGKRLAVIDFGRIK------LRGTIAW 386
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
+W A++ ++ R+R VA++W +++ RD
Sbjct: 387 WIWGIAHIYFLIGLRHRLSVALSW--LWIYARD 417
>gi|319783376|ref|YP_004142852.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317169264|gb|ADV12802.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 421
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 144/277 (51%), Gaps = 21/277 (7%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEA-NEILSSFD 67
++ LL +VGGGPTGVE +G + + +R + ++ V LIEA + IL++F
Sbjct: 154 KRQALLTIAIVGGGPTGVELAGTIVELAHDTLRGEFRNIDTRQTRVVLIEAGDRILANFA 213
Query: 68 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
+L YA L + GV + G V D++ ++ D ++ ++W+ GV S + L
Sbjct: 214 PKLSDYANKALERLGVTVELGRAVTRCDAEGVVFGD-KQLAARTILWAAGVAASPAAEWL 272
Query: 127 DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186
GR+ ++ L VP ++F +GD + L G+ V P +A A+++G+++ + +
Sbjct: 273 GAKADRAGRVLVEPDLSVPGSPEIFVIGDAAHVLRPDGRPV-PGVAPSAKQEGRHVAATI 331
Query: 187 NRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSW 246
KA G +A+ PF YRH G +ATIG+ A +D + L G+L+W
Sbjct: 332 ----KARLGGDTTAR------PFHYRHAGDLATIGKRAAAIDF------GWIKLTGWLAW 375
Query: 247 LVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W A++ ++ +RNR V+++W + G+ +R+
Sbjct: 376 WLWGVAHIYFLIGFRNRLAVSLSWLWIYATGQRSARL 412
>gi|260060756|ref|YP_003193836.1| NADH dehydrogenase [Robiginitalea biformata HTCC2501]
gi|88784886|gb|EAR16055.1| putative NADH dehydrogenase [Robiginitalea biformata HTCC2501]
Length = 434
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 126/276 (45%), Gaps = 27/276 (9%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILS 64
+ E+ L++ ++G GPTGVE +G ++ + Y H+ D + + L E A+ +L
Sbjct: 153 DQAERRALMNFCIIGAGPTGVELAGAFAELKRHVFPRDYKHLAVDEMEINLFEGADRVLP 212
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVG----P 119
+ + L GVR+ + V D + L D E +W+ GV P
Sbjct: 213 PMSETASRKSREFLESLGVRIHLDTFVDTYDGRLLTTKDRREFRTANCIWTAGVTGALLP 272
Query: 120 STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQG 179
S D S GR+ +DE RV VFA+GD + P +AQ A +QG
Sbjct: 273 GFPEGSTD---SRTGRLLVDELNRVRGYGSVFAIGDIALMRTDDYPEGHPQMAQPALQQG 329
Query: 180 KYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLS 239
+L L R+ K ++M+ PF Y+ GSMATIGR KA+VDL G
Sbjct: 330 AHLADNLERLLKG--------REMQ---PFNYKDKGSMATIGRNKAVVDL------PGYQ 372
Query: 240 LAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
GF +W +W +L +V +RN+ V NW ++
Sbjct: 373 FGGFAAWFIWMFIHLMSLVGFRNKVVVFFNWVYNYI 408
>gi|312199570|ref|YP_004019631.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Frankia
sp. EuI1c]
gi|311230906|gb|ADP83761.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Frankia
sp. EuI1c]
Length = 494
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 137/275 (49%), Gaps = 35/275 (12%)
Query: 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH--VTLIEANEILSSFDDRL 70
RLL VVVG GPTGVE +G++++ R +R+ + ++ + V L A +L +F D+L
Sbjct: 174 RLLTFVVVGAGPTGVEMAGQIAELAHRTLRRDFRNIDPHKARIVLLDAAPAVLPAFGDKL 233
Query: 71 RHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDG----TEVPYGLLVWSTGVGPSTLVKS 125
YA +L K GV + G +V DVD+ + + D + VW+ GV + L +
Sbjct: 234 GDYAVKRLEKLGVDVQLGAMVTDVDATGIEVKDAGGGKRRIESVCKVWAAGVQANPLGRQ 293
Query: 126 LDLPKSP----GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 181
L GR+ ++ L +P +V+ VGD LP +AQVA + G++
Sbjct: 294 LADQSGAKLDRAGRVEVEPDLTLPGYPEVYVVGDMISL------NRLPGVAQVAIQGGRH 347
Query: 182 LF-SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSL 240
+ RI GR + G F Y GSMATI R+ A+ + + L L
Sbjct: 348 AARDIRARIN----GR-------QTGKKFKYHDKGSMATISRFSAVASIGR------LKL 390
Query: 241 AGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
GF++WL+W + +L ++ +++R ++WA +FV
Sbjct: 391 TGFVAWLMWLAVHLVYIIGFKHRVTTLLHWAVSFV 425
>gi|168013036|ref|XP_001759207.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689520|gb|EDQ75891.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 639
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 110/194 (56%), Gaps = 13/194 (6%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L +S+E++ +LL V+VGGGPTGVE++ EL D I D+ Y ++ +++TL+++ +
Sbjct: 271 LPHLSDEDRRKLLSFVIVGGGPTGVEYAAELHDLIYEDLTSLYPELQKIVNITLVQSGDH 330
Query: 62 ILSSFDDRLRHYATTQLSKSGVRL-----VRGIVKDVDSQKLILNDG-TEVPYGLLVWST 115
IL++FD R+ YA + S+ G+ + V G+ ++ S K E+PYG++VWST
Sbjct: 331 ILNTFDGRISEYAEKKFSREGIDVKIGSRVLGVTEETISFKSKATGKLMEIPYGMIVWST 390
Query: 116 GVGPSTLVKSLDLPKSPGGR----IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPAL 171
G+G ++ D K G + DEWLRV + V+A+GDC+ + + L
Sbjct: 391 GIGTRPVIA--DYMKQIGQTDRRVLATDEWLRVKNTDGVYALGDCATVEQRKIAEDIADL 448
Query: 172 AQVAERQGKYLFSL 185
++A++ G S+
Sbjct: 449 FKLADKDGDGYLSV 462
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 58/125 (46%), Gaps = 22/125 (17%)
Query: 169 PALAQVAERQGKYLFSLLNRIGKA----------GGGRANSAKDMELGDPFVYRHLGSMA 218
PA AQVA +QG+YL N + GGGR PF YRHLG A
Sbjct: 527 PATAQVAAQQGEYLALSFNHMAMGSPDEGPIRVRGGGRHRY-------HPFRYRHLGQFA 579
Query: 219 TIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
+G +L + S G S WL W S Y ++ VSWR R V +W FVFGR
Sbjct: 580 PLGGETTAAELPGDWVSIGRST----QWL-WYSVYASKQVSWRTRALVIFDWTKRFVFGR 634
Query: 279 DISRI 283
D SR+
Sbjct: 635 DSSRM 639
>gi|354615463|ref|ZP_09033230.1| NADH dehydrogenase (ubiquinone) [Saccharomonospora paurometabolica
YIM 90007]
gi|353220179|gb|EHB84650.1| NADH dehydrogenase (ubiquinone) [Saccharomonospora paurometabolica
YIM 90007]
Length = 431
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 132/276 (47%), Gaps = 23/276 (8%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILSSF 66
E + R L V VGGG TGVE EL D + DV + + + + + L+EA + IL +
Sbjct: 155 ELRRRALTFVFVGGGYTGVEAVAELQDMAV-DVLEGFPEIDRTEMRWVLVEAVDRILGTV 213
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
L ATT+L+ G+ + + +++ + L L+DGT+ LVW G P T+V
Sbjct: 214 TPDLAELATTELTARGIDIRLNTLLESAEDGVLALSDGTKFEADTLVWVAGTRPHTIVGQ 273
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF-S 184
L LP GR+ +D+ +RV ++++ GDC+ + P AQ A RQ + L +
Sbjct: 274 LGLPVDDRGRLVVDDTMRVNGHPNIWSAGDCAAVPDPEKGGTCPPTAQHAVRQAQQLGDN 333
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
LL + R S K PF Y G T+G+ KA+ E G + G L
Sbjct: 334 LLYTV------RGRSVK------PFRYNSRGEFVTLGKNKAV------GEVLGRKVNGSL 375
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
+W + R+ Y T++ +W V +W FG D+
Sbjct: 376 AWTLRRAYYATQIPTWNRTVRVLGDWLVGMPFGHDV 411
>gi|218515760|ref|ZP_03512600.1| NADH dehydrogenase protein [Rhizobium etli 8C-3]
Length = 429
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 129/258 (50%), Gaps = 19/258 (7%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSFDD 68
+ LL +VG GPTGVE +G +++ + + + ++ V L+EA +L +F +
Sbjct: 189 RDALLTFTIVGAGPTGVELAGIIAELAHITLPREFRNIDTRKTRVVLVEAGPRVLPTFAE 248
Query: 69 RLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 128
L YA L K GV ++ G S + T V +VW+ GV S + L +
Sbjct: 249 ELSAYAQRALEKLGVEVLLGKPVTECSADGVRIGETFVASRTIVWAAGVTASPAARWLGV 308
Query: 129 PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 188
P GR+ +++ L P + DVF +GD + + GK V P +A A++QG Y+ ++
Sbjct: 309 PADRAGRVVVEKDLSAPDLPDVFVIGDTASVMREDGKPV-PGIAPAAKQQGGYVAKVIR- 366
Query: 189 IGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLV 248
+ G A + PF Y H GS+ATIG+ A++D + K L G+++W +
Sbjct: 367 -ARLSGKPAPA--------PFKYWHQGSLATIGQSAAIIDFGRIK------LKGWIAWWI 411
Query: 249 WRSAYLTRVVSWRNRFYV 266
W A++ ++ R+RF V
Sbjct: 412 WGLAHIYFLIGTRSRFTV 429
>gi|172040743|ref|YP_001800457.1| NADH dehydrogenase [Corynebacterium urealyticum DSM 7109]
gi|448823717|ref|YP_007416882.1| NADH dehydrogenase [Corynebacterium urealyticum DSM 7111]
gi|171852047|emb|CAQ05023.1| NADH dehydrogenase [Corynebacterium urealyticum DSM 7109]
gi|448277214|gb|AGE36638.1| NADH dehydrogenase [Corynebacterium urealyticum DSM 7111]
Length = 476
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 141/282 (50%), Gaps = 31/282 (10%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSF 66
EE+ RLL+ VVVG GPTGVE +G+L++ R + + + V + + LI+ ++L F
Sbjct: 163 EERRRLLNFVVVGAGPTGVELAGQLAEMAHRTLAKEFREVDTNDARIILIDGGPQVLPPF 222
Query: 67 DDRLRHYATTQLSKSGVRLV-RGIVKDVDSQ-----KLILNDGTEVPYGLLVWSTGVGPS 120
RL A +L GV +V +V +VD + + + + +P +WS GV S
Sbjct: 223 GKRLGRKARRKLEDLGVEVVLNSLVTNVDREGVTYKNMKTGEESSIPSYAKIWSAGVAAS 282
Query: 121 TLVKSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
L K + + GR+ ++E L + ++VF +GD + G LP +AQVA
Sbjct: 283 PLGKHVADQAGVESDRAGRVMVNEDLTLGEHKNVFLIGDM---INLNG---LPGVAQVAM 336
Query: 177 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
+ G+Y + I + G + A+ PF Y GSMA + R+ A+V + + +
Sbjct: 337 QGGQYAAKTI--IDEIENGTSPEAR-----APFDYFDKGSMAIVSRFNAVVKINKAE--- 386
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGR 278
++GF+ WL+W + +L +V +RNR A +W V R
Sbjct: 387 ---VSGFIGWLMWLALHLLYLVGFRNRAIAAFSWGLNSVSRR 425
>gi|168027288|ref|XP_001766162.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682594|gb|EDQ69011.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 553
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 94/164 (57%), Gaps = 9/164 (5%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 61
L + EE + +LL V+VGGGPTGVEF+ EL DFI D+ Y H+ + + +TL+++ +
Sbjct: 178 LPHVKEEVRKKLLSFVIVGGGPTGVEFAAELHDFIHDDLLNLYPHLHNDVKITLVQSGDH 237
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRGI------VKDVDSQKLILNDGTEVPYGLLVWST 115
IL+++D+R+ YA + ++ G+ + G +D + +PYG++VWST
Sbjct: 238 ILNTYDERISKYAEQKFTREGIHVNTGCRVLGVQAGAIDFKIKSTGQLVNLPYGMIVWST 297
Query: 116 GVGPSTLVKSL--DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS 157
G+G ++ + ++ + DEWLR+ + + F +GDC+
Sbjct: 298 GIGTRPVIADFMSQIEQNDRRVLATDEWLRIKNCEGTFGIGDCA 341
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 168 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELG-------DPFVYRHLGSMATI 220
+PA AQVA +QG+YL N + M + PF Y+HLG A +
Sbjct: 435 MPATAQVAAQQGEYLAHCFNHMTAEVASHMAPEGPMRIRGKGRHRFQPFQYQHLGQFAPL 494
Query: 221 GRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
G KA +L + S G S WL W S Y ++ VSWR R V +W FGRD
Sbjct: 495 GGEKAAYELPGDWVSIGRST----QWL-WYSVYASKQVSWRTRTLVVFDWTKRMFFGRDS 549
Query: 281 SRI 283
SR+
Sbjct: 550 SRV 552
>gi|409358527|ref|ZP_11236890.1| NADH dehydrogenase [Dietzia alimentaria 72]
Length = 477
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 138/275 (50%), Gaps = 32/275 (11%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSG---ELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 64
EEE+ RLL ++VG GPTGVE +G EL+ ++D +R + + L A +L
Sbjct: 168 EEERRRLLTFIIVGAGPTGVEMAGQVAELAQHTLKDSFRRIDPASARV-ILLDAAPAVLP 226
Query: 65 SFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGT----EVPYGLLVWSTGVGP 119
F ++L + A +L K GV + + +V +VD + + D + +WS GV
Sbjct: 227 PFGNKLGNAARARLEKMGVEIQLNAMVTNVDYHGIEVKDPDGSVRRIDASCKIWSAGVKA 286
Query: 120 STLVKSL----DLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
S+L K L D GR+ +++ L +P ++F VGD L++ LP +AQVA
Sbjct: 287 SSLGKQLAEQTDAEIDRAGRVLVEKDLSLPGHPEIFVVGDMMS-LDN-----LPGVAQVA 340
Query: 176 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 235
+ GKY + + G+ S + PF Y GSMAT+ RY A+V + +
Sbjct: 341 IQGGKYAAKQI--VAGVEKGKTPSER-----PPFKYFDKGSMATVSRYSAVVKMGR---- 389
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+ ++GF++W++W +L ++ ++NR +W
Sbjct: 390 --IEISGFIAWVMWLIVHLAYLIGFKNRLTAMFSW 422
>gi|163756317|ref|ZP_02163431.1| putative NADH dehydrogenase [Kordia algicida OT-1]
gi|161323669|gb|EDP95004.1| putative NADH dehydrogenase [Kordia algicida OT-1]
Length = 430
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 142/285 (49%), Gaps = 40/285 (14%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELS---------DFIMRDVRQRYSHVKDYIHVTLIEA 59
EE++ L++ V+VG GPTGVE +G L+ D+ D+RQ +++ L+++
Sbjct: 155 EERNALMNFVIVGAGPTGVELAGALAEIKKGILPKDYPDLDIRQ--------MNINLVQS 206
Query: 60 NE-ILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGV 117
+ IL + ++ A L GV + + + V + D + N L+WS GV
Sbjct: 207 SSRILPAMSEQASEKAEDYLQGLGVDVWKNLRVTNYDGDWVSTNGTVNFRAATLIWSAGV 266
Query: 118 GPSTL--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVA 175
+T+ V +L + G RI ++E+ +V D++A+GD + P +AQ A
Sbjct: 267 KGATIAGVDGEEL-ITRGNRILVNEFNQVKGFDDIYALGDIASMQSEDYPYGHPMMAQPA 325
Query: 176 ERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 235
+QGK+L N + K G K+M+ PF Y GSMAT+GR KA+VDL + K
Sbjct: 326 IQQGKHLGK--NLVRKLNG------KEMK---PFSYLDKGSMATVGRNKAVVDLPKFK-- 372
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGRD 279
G +W VW +L ++ +RNR V +NW +V F R+
Sbjct: 373 ----FQGVFAWFVWMFVHLFFLIGFRNRMVVFINWVYNYVRFDRE 413
>gi|379737011|ref|YP_005330517.1| NADH dehydrogenase, FAD-containing subunit [Blastococcus
saxobsidens DD2]
gi|378784818|emb|CCG04488.1| NADH dehydrogenase, FAD-containing subunit [Blastococcus
saxobsidens DD2]
Length = 475
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 136/278 (48%), Gaps = 33/278 (11%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH--VTLIEANEILSSF 66
+E RL+ VVVG GPTGVE +G++++ R +R+ + ++ + L A +L SF
Sbjct: 169 DEIDRLMTFVVVGAGPTGVEMAGQIAELARRTLRRDFRNIDPSCARIILLDAAPAVLPSF 228
Query: 67 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPST 121
+L A QL++ GV + G +V DVD+ L + D + +W+ GV S
Sbjct: 229 GQKLGDRARRQLNEIGVDVQLGAMVTDVDADGLDVKDADGQTRRIQAATKIWAAGVQASE 288
Query: 122 LVKSLDLPKSP----GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
L + L GRI + L +P ++ VGD + + GK LP +AQVA +
Sbjct: 289 LGRILGEQTGAEVDRAGRISVQPDLTLPGHPEIHVVGD----MMALGK--LPGVAQVAIQ 342
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
G+Y + R + G A PF Y GSMATI R+ A+ D+ +
Sbjct: 343 GGRYAAEAIER--RVAGTPAQP--------PFHYFDKGSMATISRFSAVADVGK------ 386
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
L +GF +W++W +L +V +++R ++W +F+
Sbjct: 387 LKFSGFFAWVLWLVVHLMYIVGFKSRITTVLHWMVSFL 424
>gi|384515601|ref|YP_005710693.1| NADH dehydrogenase [Corynebacterium ulcerans 809]
gi|334696802|gb|AEG81599.1| NADH dehydrogenase [Corynebacterium ulcerans 809]
Length = 452
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 132/273 (48%), Gaps = 32/273 (11%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIE-ANEILSSFD 67
E+ RLL V+VG GPTGVE +G+L++ R + Y+ + L++ A ++L F
Sbjct: 164 ERDRLLTFVIVGAGPTGVELAGQLAEMAHRTLAGEYTRFNPANAKIILLDGAPQVLPPFG 223
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTEVPYGLL-VWSTGVGPST 121
RL A +L K GV + + IV DVD K +D T +WS GV S
Sbjct: 224 KRLGRNAQRELEKIGVTVKLNAIVTDVDENSVTYKSTTDDSTHTINSFCKIWSAGVAASP 283
Query: 122 LVK----SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
L K L + GR+ ++ L V S ++VF +GD LP +AQ A +
Sbjct: 284 LGKVLADQLGVEVDRAGRVPVNPDLSVGSEKNVFVIGDMMSL------NNLPGVAQTAIQ 337
Query: 178 QGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKG 237
G Y + +I GR SA + E PF Y GSMAT+ R+ A+V L +
Sbjct: 338 GGAY---VAEQIVAEVEGR--SADERE---PFEYYDKGSMATVSRFNAVVKLGK------ 383
Query: 238 LSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+ + GF+ W++W +L +V +RNR A +W
Sbjct: 384 VEVTGFIGWIMWLCVHLMFLVGFRNRATAAFSW 416
>gi|423225743|ref|ZP_17212210.1| hypothetical protein HMPREF1062_04396 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392632088|gb|EIY26054.1| hypothetical protein HMPREF1062_04396 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 430
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 133/269 (49%), Gaps = 20/269 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSSF 66
E++ RL+ V+VGGG TG+E SG L++ + Q Y + + + + L++ A +LS+F
Sbjct: 160 EKRKRLMTFVIVGGGATGIELSGALAEMKKFVLPQDYPDLDMNLMRIILVDGAPRLLSAF 219
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
+ L K V ++ + V + ++ + L+D + + + W GV +++
Sbjct: 220 SKKSSEEVANYLLKRDVEIITSVQVTNYENGTMTLSDNSTLETMNVFWVAGVRANSIDGL 279
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
PG R+ +D + V ++FA+GD + + P + Q A +Q + L
Sbjct: 280 AKEAYGPGNRLLVDLYNCVQGYNNIFAIGDTALMISKEYPKGHPQVVQPAIQQARNLIQN 339
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
L+R + +E+ PFVY + GSMATIGR A+V+L K L GF +
Sbjct: 340 LDR----------KERGLEM-QPFVYHNKGSMATIGRNHAVVEL------KNLRFGGFPA 382
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
W VW +L +V +NR ++ V+W ++
Sbjct: 383 WAVWLFIHLMSIVGVKNRLFIFVDWMWSY 411
>gi|325293389|ref|YP_004279253.1| NADH dehydrogenase [Agrobacterium sp. H13-3]
gi|325061242|gb|ADY64933.1| NADH dehydrogenase [Agrobacterium sp. H13-3]
Length = 421
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 137/279 (49%), Gaps = 19/279 (6%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILS 64
+EEE+ L V++G GPTGVE +G +++ + + + +V V L+EA +L
Sbjct: 149 NEEERQAQLTFVIIGAGPTGVEMAGMIAELAHKALPPEFRNVDTRKSRVLLVEAGPRVLP 208
Query: 65 SFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
F D L YA L K GV ++ G + + + T P +VW+ GV S K
Sbjct: 209 VFTDDLSAYAKQALEKLGVEVLLGTPVTACTDEGVTVGETFYPCRTVVWAAGVQASPAAK 268
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
L+ GR + L + ++F +GD + + G+ V P +A A++QG ++
Sbjct: 269 WLNAAADRAGRAIVGPHLNLEDDPNIFVIGDTAAVNQENGRPV-PGIAPAAKQQGAHVAK 327
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
++ +A + + E PF Y H G++ATIG+ A++D + K L G L
Sbjct: 328 VI---------KARLSGEPEPA-PFRYSHQGNLATIGKRAAVIDFGRFK------LKGVL 371
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+W +W A++ ++ R+R VA +W ++ G+ +R+
Sbjct: 372 AWWIWGLAHIYFLIGTRSRLAVAWSWLWIYLSGQHSARL 410
>gi|228473625|ref|ZP_04058377.1| NADH:quinone dehydrogenase [Capnocytophaga gingivalis ATCC 33624]
gi|228274997|gb|EEK13807.1| NADH:quinone dehydrogenase [Capnocytophaga gingivalis ATCC 33624]
Length = 440
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 132/269 (49%), Gaps = 22/269 (8%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSF 66
EE++ L++ V+VGGGPTGVE +G ++ + Y + ++V LI+A+ +L
Sbjct: 161 EERNSLMNFVIVGGGPTGVELAGAFAELKSHILPTDYPDLDIRKMNVHLIQADPRLLVGM 220
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
++ A L K GV + VKD D ++ N L+W+ GV ST ++
Sbjct: 221 GEKSSQKAKEYLEKMGVTIWFNTFVKDYDGSNVVTNT-HHFETRTLIWTAGVKGST-IEG 278
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
L GR ++E+ V +++FA+GD + + P +AQ A +QGK L
Sbjct: 279 LPQESIQFGRYIVNEFNEVKGCENIFAIGDIACMISDKYPKGHPMVAQPAIQQGKLLGKN 338
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
L R + N+ K M PF Y GSMAT+GR KA+V E G+ +G+ +
Sbjct: 339 LKR-------KINN-KSM---TPFSYFDKGSMATVGRNKAVV------EVAGMRFSGWFA 381
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
W++W +L +V +RN+ NW +
Sbjct: 382 WILWMVVHLAFLVGFRNKMVALANWIVQY 410
>gi|50285295|ref|XP_445076.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524379|emb|CAG57976.1| unnamed protein product [Candida glabrata]
Length = 524
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 151/299 (50%), Gaps = 37/299 (12%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSF 66
+ E+ RL+ VVVGGGPTGVE +GEL DF+ +++ + + + + + L+EA I L+ F
Sbjct: 233 DPERKRLMSIVVVGGGPTGVETAGELQDFVHQELGKFLPSLAEDVQIHLVEALPIVLNMF 292
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLVWSTG- 116
+ +L YA + L + ++L +R V V+ +L+ E +PYG L+W+TG
Sbjct: 293 EKKLSSYAQSVLEDTSIKLHLRTAVSKVEETQLLAKTKHEDGSVTEETIPYGTLIWATGN 352
Query: 117 -VGP--STLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD---CSGYLESTGKTVLPA 170
P + L K + + + I+ +L+V ++FA+GD C LP
Sbjct: 353 KCRPIITDLFKKIPEQNTSTRALNINSFLQVQGSNNIFAIGDNAFCG----------LPP 402
Query: 171 LAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGD---------PFVYRHLGSMATIG 221
AQVA +Q +YL +++ + + A+ E D PF Y HLG++A +G
Sbjct: 403 TAQVAHQQAEYLAKTFDKMAQLPNFHKSLAERKEKADLLFEENNFKPFKYTHLGALAYLG 462
Query: 222 RYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
+A+ ++ K S + G ++ +WR +YL ++S R +F V +W F RD
Sbjct: 463 SERAIANITYGKRSL-YTGGGLFTFYIWRLSYLAMLLSARLKFKVVSDWLKLAFFRRDF 520
>gi|327406025|ref|YP_004346863.1| NADH dehydrogenase (ubiquinone) [Fluviicola taffensis DSM 16823]
gi|327321533|gb|AEA46025.1| NADH dehydrogenase (ubiquinone) [Fluviicola taffensis DSM 16823]
Length = 424
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 137/276 (49%), Gaps = 25/276 (9%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY--IHVTLIEAN-EIL 63
+++E+ L++ V+VG GPTGVE SG ++ + + Y + D+ + + L+E + L
Sbjct: 148 NKQEQDELMNLVIVGAGPTGVELSGAFAEMKTKVLPHDYPNY-DFSRLKIILLEGSPNTL 206
Query: 64 SSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTL 122
++ D+ R ++ L G+ + +V D L L G +P ++W+ GV + L
Sbjct: 207 NAMSDKSRAWSRKYLEGMGIDVRTSTVVSTFDGHNLTLKTGEVIPTQTVIWAAGVQGNVL 266
Query: 123 VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTV-LPALAQVAERQGKY 181
L+ R +D + ++ ++V+A+GD S Y+E+ P LA VA QG+
Sbjct: 267 A-GLEKATMVRARYMVDHFSKIVGYENVYAIGDIS-YMETEKYPQGHPQLANVAINQGRV 324
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
L A RA ++ F Y+ G+MAT+G++KA+V+L
Sbjct: 325 L---------ANNFRAKWIGKKQVA--FEYKDKGTMATVGKHKAVVEL------PNFKFQ 367
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFG 277
G+ +W+VW +L ++S RN+ V NWA ++ G
Sbjct: 368 GYFAWMVWMVLHLMLILSVRNKIAVFFNWAWRYITG 403
>gi|256370592|ref|YP_003108417.1| putative type II NADH dehydrogenase [Candidatus Sulcia muelleri
SMDSEM]
gi|256009384|gb|ACU52744.1| putative type II NADH dehydrogenase [Candidatus Sulcia muelleri
SMDSEM]
Length = 416
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 134/269 (49%), Gaps = 26/269 (9%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEANE-ILSSF 66
+++ L++ V+VGGGPTGVE +G L++F + Y + + I + LI+A + +L
Sbjct: 157 KKQCLLMNFVIVGGGPTGVELAGSLAEFKSSIFPKDYPELDNKKIKIHLIQATKRLLDGM 216
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
+ A L GV + + VKD D + L N G + +W+ GV L+K
Sbjct: 217 SESSSKKALKYLKNMGVNVWLNNPVKDYDGKILSTNKGKLKSINV-IWTAGV-KGALIKG 274
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
L RI +D + +V +++FA+GD + ++ G P +A A +QG +L
Sbjct: 275 LKKKYLANNRIQVDCFNKVKGEKNLFAIGDVA-VMKPNGH---PMIALPAIKQGIHLAKN 330
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
NR S K + PF Y + +MA IGR KA+ D+ L ++GF +
Sbjct: 331 FNRFF--------SKKQL---IPFNYHNKITMAIIGRNKAVCDIF------FLKISGFFA 373
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
WL+W S +L ++V +RN+ +NW T +
Sbjct: 374 WLIWMSIHLIKIVGFRNKLLTLINWGTQY 402
>gi|307109311|gb|EFN57549.1| hypothetical protein CHLNCDRAFT_143182 [Chlorella variabilis]
Length = 540
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 163/310 (52%), Gaps = 48/310 (15%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-E 61
L G E E + LH VVVGGGPTGVEF+G +SDF+ D++++Y + Y+ VTL+ +
Sbjct: 246 LPGSQEGEMATALHFVVVGGGPTGVEFAGTMSDFLREDLKKKYPELMPYVRVTLLNSQGT 305
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120
ILS+FD++++ +A + GV + G+ V +V + + L G E+ YG+ VWS G P
Sbjct: 306 ILSAFDEKMQKHALDNFKRVGVDVRTGVRVTEVTNDTITLKGGEEIKYGVCVWSAGNAPR 365
Query: 121 TLVKSL--DLPK----SPGGR---IGIDEWLRVPSVQDVFAVGDCS-----------GYL 160
LV+ L +P+ PGGR + +D +LRV +DV A+GDCS ++
Sbjct: 366 PLVQQLAEQIPEQAQYQPGGRPSKLAVDPFLRVIGARDVLAIGDCSLVVAGQQGAYAAHM 425
Query: 161 ESTGKTVLPALAQVAER--QGKYLFSLL-------NRIGKAGGGRANSAKDMELGDPFVY 211
+ G LP +++A+ G+ LF+ + + G+ G + + + PF +
Sbjct: 426 INRGFMPLPPPSKLADYLFPGQQLFATMGSTLAYDDEGGEEGEEGEGAPRLIYYKKPFEF 485
Query: 212 RHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWA 271
+LG MA +G +AL ++ Q +K + L+G L++LV V + R
Sbjct: 486 LNLGIMAYLGDDRALTEI-QLPFTK-VKLSGSLAFLV--------CVPDQARLKAQ---- 531
Query: 272 TTFVFGRDIS 281
VFGRD+S
Sbjct: 532 ---VFGRDLS 538
>gi|311739410|ref|ZP_07713245.1| NADH dehydrogenase [Corynebacterium pseudogenitalium ATCC 33035]
gi|311305226|gb|EFQ81294.1| NADH dehydrogenase [Corynebacterium pseudogenitalium ATCC 33035]
Length = 447
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 134/283 (47%), Gaps = 34/283 (12%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSG---ELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSF 66
E+ RLL ++VG GPTGVE +G EL++ + DV Y I++ L A ++L F
Sbjct: 164 ERERLLTFIIVGAGPTGVELTGQIAELANRTLNDVYSNYGTTSAKIYL-LDGAPQVLPPF 222
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILND-----GTEVPYGLLVWSTGVGPS 120
RL A L K GV++ + +V DV + + D T + +WS GV S
Sbjct: 223 GKRLGRKAQRTLEKEGVQVHLNAMVTDVTADTVTYKDMKTEEETTLTGATKIWSAGVAAS 282
Query: 121 TLVKSLD----LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
L K + + GR+ ++E L V +V+ VGD LP LAQVA
Sbjct: 283 PLGKMVAEQAGVEADRAGRVSVNEDLTVGEHNNVYMVGDMISL------NRLPGLAQVAI 336
Query: 177 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
+ G ++ L+ +A ++A + E F Y GSMA + R+ A+V L + +
Sbjct: 337 QGGAHVAKLI----QAKVDEESTANEKE---AFDYFDKGSMAIVKRFNAVVKLGKTE--- 386
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
GF W+ W +LT V+ R+R V VNWAT + RD
Sbjct: 387 ---FGGFAGWVAWLGLHLTYVIGLRSRLAVLVNWATN-ILSRD 425
>gi|424874012|ref|ZP_18297674.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. viciae WSM1455]
gi|393169713|gb|EJC69760.1| NADH dehydrogenase, FAD-containing subunit [Rhizobium leguminosarum
bv. viciae WSM1455]
Length = 438
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 123/254 (48%), Gaps = 27/254 (10%)
Query: 28 EFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVR- 84
E +G +++ + V + + H+ V L+EA N IL + L A QL GV
Sbjct: 191 EMAGAIAELARKVVVRDFRHINAASARVVLVEAGNRILPTMPACLSAKAQRQLEGLGVEV 250
Query: 85 LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRV 144
L V DS+ ++L DG + ++W+ GV S K L GR +DE L V
Sbjct: 251 LATAAVTHCDSEGVMLADGRHIGSACVLWAAGVMASKAAKWLGAAADRAGRTVVDERLNV 310
Query: 145 PSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDME 204
P ++F +GD + G+ V P +A A++ G++ A++ + +
Sbjct: 311 PGHDNIFVIGDTAAVKNEDGRPV-PGIAPAAKQMGEHA--------------AHAIRALI 355
Query: 205 LG---DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWR 261
G +PF YRH G++ATIGR A+ D + + L+GF +WLVW A+L +V +R
Sbjct: 356 AGNPVEPFRYRHFGNLATIGRKAAVADFGR------IRLSGFSAWLVWNLAHLWFLVGFR 409
Query: 262 NRFYVAVNWATTFV 275
NR V ++W ++
Sbjct: 410 NRLVVFMDWGLAYL 423
>gi|114564042|ref|YP_751556.1| NADH dehydrogenase [Shewanella frigidimarina NCIMB 400]
gi|114335335|gb|ABI72717.1| NADH dehydrogenase [Shewanella frigidimarina NCIMB 400]
Length = 428
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 128/256 (50%), Gaps = 20/256 (7%)
Query: 19 VVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDRLRHYATT 76
+VG G TGVE + EL I Y ++ KD++ + LIEA+ +IL +++ A T
Sbjct: 169 IVGAGATGVELAAELHHVIESVREYGYQNISKDHLDINLIEASTKILPQLPEQVSTRAQT 228
Query: 77 QLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGV-GPSTLVKSLDLPKSPGG 134
LSK GV+L G+ VK+V + + G + + VW+ GV GP LP +P
Sbjct: 229 VLSKLGVKLHLGVQVKEVTKEGFVTATGETIKANIKVWAAGVKGPKVFENFTQLPVTPRN 288
Query: 135 RIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGG 194
+I +D+ +RV + D++A+GDC+ + +GK V P AQ A + L+
Sbjct: 289 QIDVDDCMRVKGIDDIYALGDCAQLILPSGKPV-PPRAQAAAQMADRLY----------- 336
Query: 195 GRANSAKDM--ELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSA 252
AN M + PFVY+ GS+ ++ R+ A+ +L + S + G ++ L++ S
Sbjct: 337 --ANICLKMKQQPEKPFVYKDYGSLVSLSRFSAVGNLMGSLRSGDFFVEGHVARLMYISL 394
Query: 253 YLTRVVSWRNRFYVAV 268
Y + S F +V
Sbjct: 395 YQRHLASLYGWFSASV 410
>gi|376287722|ref|YP_005160288.1| NADH dehydrogenase [Corynebacterium diphtheriae BH8]
gi|371585056|gb|AEX48721.1| NADH dehydrogenase [Corynebacterium diphtheriae BH8]
Length = 454
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 134/274 (48%), Gaps = 32/274 (11%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH-VKDYIHVTLIE-ANEILSSF 66
+E+ RLL V+VG GPTGVE +G+L++ R + Y+ + L++ A ++L F
Sbjct: 163 KERERLLTFVIVGAGPTGVELAGQLAEMAHRTLSGEYTQFTPSNAKIILLDGAPQVLPPF 222
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQ----KLILNDGTEVPYGLL-VWSTGVGPS 120
RL A +L K GV + + IV DVD K ++D +WS GV S
Sbjct: 223 GKRLGRTAQRELEKIGVTVKLNAIVTDVDENSVTYKSTVDDSLHTIDSFCKIWSAGVAAS 282
Query: 121 TLVK----SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
L K L + GR+ ++E L V ++VF +GD LP +AQVA
Sbjct: 283 PLGKLVAEQLGVEVDRAGRVPVNEDLSVGDDKNVFVIGDMMSL------NRLPGVAQVAI 336
Query: 177 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
+ G+Y + +I GR++S + F Y GSMAT+ R+ A+V L +
Sbjct: 337 QGGEY---VAEQIAAEVEGRSSSERPA-----FEYYDKGSMATVSRFNAVVKLGK----- 383
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+ + GF+ W++W +L +V +RNR A +W
Sbjct: 384 -VEVTGFIGWVMWLLVHLMFLVGFRNRATAAFSW 416
>gi|343084400|ref|YP_004773695.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Cyclobacterium marinum DSM 745]
gi|342352934|gb|AEL25464.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Cyclobacterium marinum DSM 745]
Length = 440
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 139/271 (51%), Gaps = 22/271 (8%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSF 66
E++ L++ V+VGGGPTGVE +G +++ + + Y + D + V LIE +L+
Sbjct: 160 EKRKSLMNVVIVGGGPTGVELAGAMAELRNKVFPKDYPQLNFDNMKVVLIEMGPSLLAGM 219
Query: 67 DDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
A L V L+ V++ D +I+N ++ L+W+ G+ P+ +
Sbjct: 220 SASSGQKAKEYLESLKVDVLLNTAVENYDGLNVIINGEEKLKTNTLLWAAGIAPNGIEGI 279
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYLFS 184
+D K GR+ ++E+ V + ++++A+GD C L K P +AQVA +Q L +
Sbjct: 280 VDTQKFKNGRLLVNEYNLVHNSKNIYALGDLCLQQLPDYPKG-HPQVAQVAIQQADNLAN 338
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFL 244
N +G+ GRA A F Y+ LGSMAT+GR A+VDL + G L
Sbjct: 339 --NFLGQL-KGRAPKA--------FRYKDLGSMATVGRKLAVVDL------PFIKFQGVL 381
Query: 245 SWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+WL W +L ++ +NR ++ ++W+ ++
Sbjct: 382 AWLTWLFVHLMAILGVKNRIFIFLDWSWNYL 412
>gi|402833819|ref|ZP_10882430.1| pyridine nucleotide-disulfide oxidoreductase [Selenomonas sp. CM52]
gi|402279701|gb|EJU28481.1| pyridine nucleotide-disulfide oxidoreductase [Selenomonas sp. CM52]
Length = 436
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 141/280 (50%), Gaps = 20/280 (7%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEANE-ILS 64
+EEE+ R+L+ VVVGGGPTGVE +G L++ I ++ Y ++ D I V L+EA +L
Sbjct: 151 NEEERRRMLNFVVVGGGPTGVELAGSLAEVINLIMKDEYHNLSPDEISVKLVEATGGLLP 210
Query: 65 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
L+ L K G+ ++ V D LIL DG +P ++W+ GV ++
Sbjct: 211 MMPPDLQQETVRVLEKKGIDVMLNTQVAGCDKNSLILKDGRVIPTNTVIWAAGVKAVPII 270
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF 183
L GR+ ++E L+V +D+FA+GDC+ + T + L +A VA + G
Sbjct: 271 SKLGFACDRAGRVIVNEKLQVEGERDIFAIGDCASFCHGTERP-LATVAPVATQGGAVAA 329
Query: 184 SLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
+ R+ A D L + F Y+ G+MATIGR +A+V++ G + GF
Sbjct: 330 RNIKRL---------IAGDENL-ETFHYKDQGAMATIGRTEAVVNM------NGTKMKGF 373
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
++W+VW +L R+ V + W + G + RI
Sbjct: 374 IAWVVWMFVHLLRLAGAHTNTTVLLKWTWNLLSGTRLGRI 413
>gi|113475715|ref|YP_721776.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Trichodesmium erythraeum IMS101]
gi|110166763|gb|ABG51303.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Trichodesmium erythraeum IMS101]
Length = 457
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 143/285 (50%), Gaps = 28/285 (9%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEA-NEILSSF 66
E++ LL +VG GPTGVE +G L++ +++ Y + + LI++ + +L SF
Sbjct: 161 EKRKALLTFAIVGAGPTGVELAGALAELAHTKLKEEYRSINTTEAKIYLIQSGDRVLPSF 220
Query: 67 DDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDG---TEVPYGLLVWSTGVGPSTL 122
L A +L K GV + + V ++++ + ++ G TE+P ++W GV S +
Sbjct: 221 KPALSQKARLELEKLGVTVMTKTRVTNIENNVVTVSSGETKTEIPAHTILWGAGVKASKV 280
Query: 123 VKSLD----LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 178
+ + GR+ +++ L +P+ D+F +GD + + G + +P +A A ++
Sbjct: 281 SEIISNRTGAKLDRAGRVFVNKDLTIPNYSDIFVIGDLANF-SHQGDSPIPGVAPAAMQE 339
Query: 179 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 238
G Y+ L+ + K E PF Y GS+A IGR++A+V + K +
Sbjct: 340 GFYVAKLIRKRLKG-----------ESLKPFYYIDYGSLAVIGRHQAVV------QYKAI 382
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+G ++WL W ++ ++ + N+ V + WA ++ G+ +R+
Sbjct: 383 RFSGPIAWLAWLFIHIYYMIEFDNQLIVMIQWAWSYFTGQGGARL 427
>gi|315606433|ref|ZP_07881448.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella buccae
ATCC 33574]
gi|315251839|gb|EFU31813.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella buccae
ATCC 33574]
Length = 432
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 135/268 (50%), Gaps = 23/268 (8%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSS 65
E + LL+ V+VGGGP+GVE +G L++ V + Y + + +++ L+ A+ +L S
Sbjct: 156 EHHRQSLLNIVIVGGGPSGVEIAGALAEMKRTVVPRDYPDLDANRMNIYLVNADRRLLKS 215
Query: 66 FDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
D A L + GV ++ G V D S +++L+DG+ + ++W +G+ ST+
Sbjct: 216 MDSASSARAEKDLREMGVNVMPGYTVVDCRSGQVMLSDGSSIDARTVIWVSGIRASTIGG 275
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVL--PALAQVAERQGKYL 182
GR+ D + V + V+A+GD S +E L P LAQVA +Q +
Sbjct: 276 IPQTSIGHAGRVLTDRFNNVKGMAGVYAIGDQS-LVEGDADYPLGHPQLAQVAIQQATNV 334
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
L RI + R PF YR+LG+MATIGR +A+ ++ + K G
Sbjct: 335 AENLMRINRNEQPR-----------PFTYRNLGTMATIGRKRAVAEIGRFK------FGG 377
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+WL+W +L ++ +N+ + +NW
Sbjct: 378 LSAWLLWLVVHLRSILGVKNKTVIFLNW 405
>gi|255325671|ref|ZP_05366768.1| NADH dehydrogenase [Corynebacterium tuberculostearicum SK141]
gi|255297281|gb|EET76601.1| NADH dehydrogenase [Corynebacterium tuberculostearicum SK141]
Length = 447
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 134/283 (47%), Gaps = 34/283 (12%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSG---ELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSF 66
E+ RLL ++VG GPTGVE +G EL++ + DV Y I++ L A ++L F
Sbjct: 164 ERERLLTFIIVGAGPTGVELTGQIAELANRTLNDVYSNYGTTSAKIYL-LDGAPQVLPPF 222
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILND-----GTEVPYGLLVWSTGVGPS 120
RL A L K GV++ + +V DV + + D T + +WS GV S
Sbjct: 223 GKRLGRKAQRTLEKEGVQVHLNAMVTDVTADTVTYKDMKTEEETTLTGATKIWSAGVAAS 282
Query: 121 TLVKSLD----LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAE 176
L K + + GR+ ++E L V +V+ +GD LP LAQVA
Sbjct: 283 PLGKMVAEQAGVEADRAGRVSVNEDLTVGEHNNVYMIGDMISL------NRLPGLAQVAI 336
Query: 177 RQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESK 236
+ G ++ L+ +A ++A + E F Y GSMA + R+ A+V L + +
Sbjct: 337 QGGAHVAKLI----QAKVDEESTANEKE---AFDYFDKGSMAIVKRFNAVVKLGKTE--- 386
Query: 237 GLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRD 279
GF W+ W +LT V+ R+R V VNWAT + RD
Sbjct: 387 ---FGGFAGWVAWLGLHLTYVIGLRSRLAVLVNWATN-ILSRD 425
>gi|402308699|ref|ZP_10827703.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella sp. MSX73]
gi|400375150|gb|EJP28060.1| pyridine nucleotide-disulfide oxidoreductase [Prevotella sp. MSX73]
Length = 423
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 135/268 (50%), Gaps = 23/268 (8%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSS 65
E + LL+ V+VGGGP+GVE +G L++ V + Y + + +++ L+ A+ +L S
Sbjct: 156 EHRRQSLLNIVIVGGGPSGVEIAGALAEMKRTVVPRDYPDLDANRMNIYLVNADRRLLKS 215
Query: 66 FDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK 124
D A L + GV ++ G V D S +++L+DG+ + ++W +G+ ST+
Sbjct: 216 MDSASSARAEKDLREMGVNVMPGYTVVDCRSGQVMLSDGSSIDTRTVIWVSGIRASTIGG 275
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVL--PALAQVAERQGKYL 182
GR+ D + V + V+A+GD S +E L P LAQVA +Q +
Sbjct: 276 IPQTSIGHAGRVLTDRFNNVKGMAGVYAIGDQS-LVEGDADYPLGHPQLAQVAIQQATNV 334
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
L RI + R PF YR+LG+MATIGR +A+ ++ + K G
Sbjct: 335 AENLMRINRNKQPR-----------PFTYRNLGTMATIGRKRAVAEIGRFK------FGG 377
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+WL+W +L ++ +N+ + +NW
Sbjct: 378 LSAWLLWLVVHLRSILGVKNKTVIFLNW 405
>gi|423279305|ref|ZP_17258218.1| hypothetical protein HMPREF1203_02435 [Bacteroides fragilis HMW
610]
gi|404585474|gb|EKA90090.1| hypothetical protein HMPREF1203_02435 [Bacteroides fragilis HMW
610]
Length = 448
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 136/268 (50%), Gaps = 21/268 (7%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILS 64
+E E+ LL+ VVVGGG TGVE +G LS+ + Y + +HV LIEA + +L+
Sbjct: 155 TERERQELLNVVVVGGGATGVEIAGVLSEMKKFVLPNDYPDMPSSLMHVYLIEAGDRLLA 214
Query: 65 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+ +A L + GV L+ V D K++L DGTE+ +W +GV T
Sbjct: 215 GMSEDSSRHAEQFLREMGVNILLNKRVTDYKDHKVVLEDGTEIATRTFIWVSGVAAITFG 274
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYL 182
G RI +DE+ RV + +FA+GD C + P LAQVA +QG+ L
Sbjct: 275 NISGELLGRGRRIKVDEFNRVQGTEHIFAIGDQCIQTTDKNYPNGHPQLAQVAIQQGELL 334
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
L R+ K K M+ PF YR+LGSMAT+GR +A+ + AG
Sbjct: 335 AKNLQRLEK--------GKPMQ---PFHYRNLGSMATVGRNRAVAEF------SSFKTAG 377
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+L+W++W +L ++ RN+ V +NW
Sbjct: 378 WLAWVMWLVVHLRSILGVRNKANVLLNW 405
>gi|108760597|ref|YP_629699.1| NADH dehydrogenase [Myxococcus xanthus DK 1622]
gi|108464477|gb|ABF89662.1| putative NADH dehydrogenase [Myxococcus xanthus DK 1622]
Length = 461
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 139/276 (50%), Gaps = 26/276 (9%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY-IHVTLIEA-NEILSSF 66
E + LL+ V++G GPTGVE +G L++ + + + + LIE +++L +
Sbjct: 156 EIRRSLLNFVIIGAGPTGVELAGSLAEISRHSLHGDFRNFDPRDARIILIEGMDKVLPVY 215
Query: 67 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTE-VPYGLLVWSTGVGPSTLVK 124
D L A L K GV + G V ++ Q + + G E +P ++W+ GV S + K
Sbjct: 216 PDDLSQKACRTLEKLGVEVRTGARVTNITEQGVFI--GQEFIPARTVLWAAGVAASPVAK 273
Query: 125 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFS 184
SL + GR+ + L +P DVF VGD S ++ GK V P LA VA ++GK+
Sbjct: 274 SLGVELDRSGRVLVTPELTIPGHDDVFVVGDLSLLKDAEGKPV-PGLAPVAMQEGKHAAH 332
Query: 185 LLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKAL-VDLRQNKESKGLSLAGF 243
+ R K M PF Y GS A IGR A+ + R+ K+ AGF
Sbjct: 333 NIR--------RQLQGKPMV---PFSYWDRGSYAVIGRGHAVGIAFRRFKQ------AGF 375
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV-FGR 278
+W+ W ++T ++ +R+R V +NWA +++ FG+
Sbjct: 376 GAWMAWLLIHITFLIGFRSRLAVLLNWAFSYLTFGK 411
>gi|424662625|ref|ZP_18099662.1| hypothetical protein HMPREF1205_03011 [Bacteroides fragilis HMW
616]
gi|404576315|gb|EKA81053.1| hypothetical protein HMPREF1205_03011 [Bacteroides fragilis HMW
616]
Length = 448
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 136/268 (50%), Gaps = 21/268 (7%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILS 64
+E E+ LL+ VVVGGG TGVE +G LS+ + Y + +HV LIEA + +L+
Sbjct: 155 TERERQELLNVVVVGGGATGVEIAGVLSEMKKFVLPNDYPDMPSSLMHVYLIEAGDRLLA 214
Query: 65 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+ +A L + GV L+ V D K++L DGTE+ +W +GV T
Sbjct: 215 GMSEDSSRHAEQFLREMGVNILLNKRVTDYKDHKVVLEDGTEIATRTFIWVSGVAAITFG 274
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYL 182
G RI +DE+ RV + +FA+GD C + P LAQVA +QG+ L
Sbjct: 275 NISGELLGRGRRIKVDEFNRVQGTEHIFAIGDQCIQTTDKNYPNGHPQLAQVAIQQGELL 334
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
L R+ K K M+ PF YR+LGSMAT+GR +A+ + AG
Sbjct: 335 AKNLQRLEK--------GKPMQ---PFHYRNLGSMATVGRNRAVAEF------SSFKTAG 377
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+L+W++W +L ++ RN+ V +NW
Sbjct: 378 WLAWVMWLVVHLRSILGVRNKANVLLNW 405
>gi|359425630|ref|ZP_09216726.1| NADH dehydrogenase [Gordonia amarae NBRC 15530]
gi|358239121|dbj|GAB06308.1| NADH dehydrogenase [Gordonia amarae NBRC 15530]
Length = 464
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 139/279 (49%), Gaps = 29/279 (10%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIE-ANEILSSF 66
EE+ RLL VVVG G TGVE +G++++ + ++ + ++ V L++ A +L +
Sbjct: 167 EERDRLLTFVVVGAGATGVEMAGQIAEMARKTLKGTFRNIDSTTARVILLDGAPVVLPPY 226
Query: 67 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLIL--NDGT--EVPYGLLVWSTGVGPST 121
+L A +L+K GV + G +V D+D L++ +DGT + VWS GV S
Sbjct: 227 GGKLSRKAAEKLAKLGVEVQLGAMVVDMDYDGLVVKDSDGTTRRIESQCKVWSAGVSASP 286
Query: 122 LVKSLDLPKS----PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAER 177
L K L+ GR+ + L +P +VF VGD + +++ +P +AQ A +
Sbjct: 287 LGKQLEAQSEVELDRAGRVKVLPDLTIPGHPEVFVVGDMA-FVDG-----VPGMAQGAIQ 340
Query: 178 QGKYLFSLLNRIGKAG--GGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKES 235
+Y + KAG G A S K PF Y GSMATI R A+ +
Sbjct: 341 GARYATDAI----KAGLSGATAQSRK------PFSYWDKGSMATIARLSAVAQIPIPGTK 390
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
K + +AGFL+WL W +L +V R+RF ++W F
Sbjct: 391 KKIEIAGFLAWLGWLFLHLMYLVGHRSRFTTFIDWTLAF 429
>gi|313672518|ref|YP_004050629.1| fad-dependent pyridine nucleotide-disulfide oxidoreductase
[Calditerrivibrio nitroreducens DSM 19672]
gi|312939274|gb|ADR18466.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Calditerrivibrio nitroreducens DSM 19672]
Length = 458
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 142/288 (49%), Gaps = 35/288 (12%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIE-ANEILSS 65
+EE+ R+L ++GGG TGVE + EL DFI +++ YS + D VT+ E A IL +
Sbjct: 148 KEERRRILSFSIIGGGITGVELACELVDFIKLKIKKDYSSISYDDFEVTIFEYAKNILPA 207
Query: 66 FDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLI-LNDGTEVPYGL---LVWSTGVGPST 121
D+ A + + G++++ D S +I N EV L +VW+ GV
Sbjct: 208 IDESQSIKAQQYVEEKGIKIINNASVDRVSDGVIYYNQNGEVKEHLTNIIVWTAGVKAQD 267
Query: 122 LVKSLDLPKSPGGRIGIDEWLRVPSVQD--VFAVGDCSGYLESTGKTVLPALAQVAERQG 179
+KS+ + P GRI +++ L Q+ +F +GD S Y E GK VLP +A +A +Q
Sbjct: 268 FLKSVSNERLPDGRIKVNKNLTPVDAQNDGIFVIGDSSAY-EYKGK-VLPPVAPLAMQQA 325
Query: 180 KY-LFSLLNRIGKAGGGRANSAKDMELGDP---FVYRHLGSMATIGRYKALVDLRQNKES 235
+ ++LN +E G P F Y H G + ++G+ ++V+L
Sbjct: 326 TIAVKNILN---------------LENGFPLQDFKYIHFGYLVSLGKNNSVVNLF----- 365
Query: 236 KGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
GL G ++++W+ Y+ ++ R + V +W +FG + S I
Sbjct: 366 -GLKFRGAFAYILWKLVYIYKIGMLRKQLGVFFDWVMVTLFGNEASLI 412
>gi|452957460|gb|EME62827.1| NADH dehydrogenase [Rhodococcus ruber BKS 20-38]
Length = 447
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 141/285 (49%), Gaps = 33/285 (11%)
Query: 4 AGISEE--EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIE-A 59
A +SE+ E+ RLL VVVG GPTGVE +G++++ +R + ++ V L++ A
Sbjct: 142 AELSEDPAEQRRLLTFVVVGAGPTGVELAGQIAELSHHTLRGAFRNIDPAAARVVLLDGA 201
Query: 60 NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLIL--NDGTE--VPYGLLVWS 114
++L + +L A L K GV + + +V DVD+ L + DGTE + VWS
Sbjct: 202 PDVLPVYGGKLSAKARQTLEKLGVEIQLNAMVTDVDATGLTVKDKDGTERRIESQCKVWS 261
Query: 115 TGVGPSTLVKSLDLPKSP----GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA 170
GV S L + L GR+ ++ L +P +VF +GD + LP
Sbjct: 262 AGVSASPLGRRLAEQSGAEVDRAGRVLVNPDLSLPGHPNVFVIGDMMALDK------LPG 315
Query: 171 LAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLR 230
LAQVA + GKY + G AG A PF Y GSMATI R+ A+ +
Sbjct: 316 LAQVAMQGGKYAARQIV-AGLAGHSPAER-------KPFKYFDKGSMATISRFSAVAKVG 367
Query: 231 QNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
+ L ++GF+ W+ W +L +V + ++ ++WATTF+
Sbjct: 368 K------LEISGFVGWVAWLGIHLLYLVGFSSKLSTLLSWATTFL 406
>gi|313146122|ref|ZP_07808315.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313134889|gb|EFR52249.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 448
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 136/268 (50%), Gaps = 21/268 (7%)
Query: 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEA-NEILS 64
+E E+ LL+ VVVGGG TGVE +G LS+ + Y + +HV LIEA + +L+
Sbjct: 155 TERERQELLNVVVVGGGATGVEIAGVLSEMKKFVLPNDYPDMPSSLMHVYLIEAGDRLLA 214
Query: 65 SFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 123
+ +A L + GV L+ V D K++L DGTE+ +W +GV T
Sbjct: 215 GMSEDSSRHAEQFLREMGVNILLNKRVTDYKDHKVVLEDGTEIATRTFIWVSGVAAITFG 274
Query: 124 KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD-CSGYLESTGKTVLPALAQVAERQGKYL 182
G RI +DE+ RV + +FA+GD C + P LAQVA +QG+ L
Sbjct: 275 NISGELLGRGRRIKVDEFNRVQGTEHIFAIGDQCIQTTDKNYPNGHPQLAQVAIQQGELL 334
Query: 183 FSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAG 242
L R+ K K M+ PF YR+LGSMAT+GR +A+ + AG
Sbjct: 335 AKNLQRLEK--------GKPMQ---PFHYRNLGSMATVGRNRAVAEF------SSFKTAG 377
Query: 243 FLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
+L+W++W +L ++ RN+ V +NW
Sbjct: 378 WLAWVMWLVVHLRSILGVRNKANVLLNW 405
>gi|87300783|ref|ZP_01083625.1| NAD binding site:FAD-dependent pyridine nucleotide-disulphide
[Synechococcus sp. WH 5701]
gi|87284654|gb|EAQ76606.1| NAD binding site:FAD-dependent pyridine nucleotide-disulphide
[Synechococcus sp. WH 5701]
Length = 472
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 134/287 (46%), Gaps = 36/287 (12%)
Query: 2 FLAGISEEEKSR-------LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIH 53
L + E E++R L VVVG GP G E +G L + + R +R + ++ D
Sbjct: 153 LLMALEEAEQTRDPERRGFLQTVVVVGAGPAGCELAGSLIELMHRAIRCDFKQLQHDRCK 212
Query: 54 VTLIEANE-ILSSFDDRLRHYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGL- 110
V L++A E +L + L A T L +GV L+ R +VK + ++ L +GT+ P L
Sbjct: 213 VVLVDAVERVLPTMHPNLSTAAATHLQGAGVTLMMRSMVKGIAPGRVSL-EGTDGPQELQ 271
Query: 111 ---LVWSTGVGPS----TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST 163
+ W+ GV S L + P GGR+ ++ VP D+ A+GD YL ++
Sbjct: 272 AATICWTAGVRASRLGALLAERTGCPVDRGGRLLVEPDFSVPGHPDIHAIGDLCAYLHTS 331
Query: 164 GKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRY 223
LP +A A + G ++ + + + + GG PF + LGSMA IG +
Sbjct: 332 DGKSLPGMAGPAVQMGGWVAAHI--LARRGGSSVA---------PFRFTDLGSMAVIGPW 380
Query: 224 KALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
A+ DLR GL + G W++W A+L + NR + W
Sbjct: 381 YAVADLR------GLHVTGLAGWVLWALAHLAFIPDTENRITLFTKW 421
>gi|401624426|gb|EJS42483.1| ndi1p [Saccharomyces arboricola H-6]
Length = 513
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 156/296 (52%), Gaps = 31/296 (10%)
Query: 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSF 66
+ E+ RLL VVVGGGPTGVE +GEL D++ +D+R+ + + + + L+EA I L+ F
Sbjct: 222 DPERKRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMF 281
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTE--------VPYGLLVWSTGV 117
+ +L YA + L + +++ +R V V+ ++L+ E +PYG L+W+TG
Sbjct: 282 EKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGN 341
Query: 118 GPSTLVKSL--DLPKSPGGR--IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQ 173
++ +L +P+ + + ++ +L+V ++FA+GD + LP AQ
Sbjct: 342 KARPVITNLFNKIPEQNASKRGLAVNNFLQVKGSNNIFAIGDNAF-------AGLPPTAQ 394
Query: 174 VAERQGKYLFSLLNRIGKAGGGRAN--SAKD-----MELGD--PFVYRHLGSMATIGRYK 224
VA ++ +YL +++ + + S KD E + PF Y LG++A +G +
Sbjct: 395 VAHQEAEYLAKNFDKMAQIPNFQKCLFSRKDKIDLLFEENNFKPFKYNDLGALAYLGSER 454
Query: 225 ALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDI 280
A+ +R K + + G +++ +WR YL+ ++S R+R V +W F RD
Sbjct: 455 AIATIRSGKRT-FYTGGGLMTFYLWRILYLSMILSARSRVKVFFDWVKLAFFKRDF 509
>gi|357028753|ref|ZP_09090778.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Mesorhizobium amorphae CCNWGS0123]
gi|355537453|gb|EHH06709.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Mesorhizobium amorphae CCNWGS0123]
Length = 421
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 141/278 (50%), Gaps = 21/278 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEA-NEILSSF 66
E++ L +VGGGPTGVE +G +++ +R + ++ V LIEA + IL++F
Sbjct: 153 EKRKAFLTLAIVGGGPTGVELAGTIAELARDTLRGEFRNIDTRQTRVVLIEAGDRILANF 212
Query: 67 DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
L YA L + GV + G V D++ ++ D T +P ++W+ GV S +
Sbjct: 213 APELSDYARKALERLGVEVELGHAVTRCDAEGVVFGD-TVLPARTILWAAGVAASPAAEW 271
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
L GR+ ++ L VP ++F +GD + L GK V P +A A++ G ++ +
Sbjct: 272 LGAAADRAGRVLVEPDLTVPGSPEIFVIGDAAHVLRPDGKPV-PGVAPAAKQAGWHVAAT 330
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
+ +A A D PF Y+H G +ATIG+ A +D + L G+ +
Sbjct: 331 I---------KARLAGDTS-PRPFRYKHDGDLATIGKRAAAIDF------GWIKLTGWPA 374
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W +W A++ ++ +RNR V+++W +V G+ +R+
Sbjct: 375 WWLWGIAHIYFLIGFRNRLAVSLSWLWIYVTGQRSARL 412
>gi|380300780|ref|ZP_09850473.1| NADH dehydrogenase, FAD-containing subunit [Brachybacterium
squillarum M-6-3]
Length = 460
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 131/263 (49%), Gaps = 19/263 (7%)
Query: 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIE-ANEILSSFDDRLRH 72
LH +VGGGPTGVE +G L+DF +++ Y + + +TLI+ +++ F + R
Sbjct: 174 LHVSIVGGGPTGVEIAGALADFREQELDILYPEMDPGTLQITLIQRGKDLIKEFREEYRE 233
Query: 73 YATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 131
YA +L GV L G V V + L+ G + + +W+ GVG + V LP+
Sbjct: 234 YAAEELQDRGVELCLGHGVDAVGYDHVELDGGRILESDITIWAAGVGIAETVADWGLPQD 293
Query: 132 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191
GR+ +DE L+V V+A GD +G G+ LP LAQ A + G+ + +++
Sbjct: 294 DRGRLVVDETLQVEGFPGVYAAGDIAG-----GEHALPQLAQPAIQTGQAVAKMID---- 344
Query: 192 AGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRS 251
A+ + PF Y G+MATIGR+ A+ L + L G + W W
Sbjct: 345 -----ADVTGATK--KPFSYLDFGTMATIGRHAAITQLPEVPGLGSHGLTGTVGWFSWLG 397
Query: 252 AYLTRVVSWRNRFYVAVNWATTF 274
++ +++ RN+ VA+N + +
Sbjct: 398 VHVAKMIGHRNQRAVAMNLLSLY 420
>gi|255078330|ref|XP_002502745.1| predicted protein [Micromonas sp. RCC299]
gi|226518011|gb|ACO64003.1| predicted protein [Micromonas sp. RCC299]
Length = 556
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 103/168 (61%), Gaps = 13/168 (7%)
Query: 3 LAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 61
L G+ EEE+ ++L +VVGGGPTGVEF+ EL DF+ DV + Y ++D I +T+++ A+
Sbjct: 181 LPGVPEEEQRKMLSVLVVGGGPTGVEFAAELHDFLREDVPRLYPALRDKISITVVQSADH 240
Query: 62 ILSSFDDRLRHYATTQLSKSGVRLV--RGIVKDVDSQKLILNDGT----EVPYGLLVWST 115
IL+++D R+ YA + + G+R++ R + + ++ T ++P+G+ VWST
Sbjct: 241 ILNTYDARISKYAEEKFKRDGIRILTNRRVTDVSQAHASVMCKKTKKIEKIPFGVCVWST 300
Query: 116 GVGPSTLVKSLDLPKSPGGR---IGIDEWLRVPSVQ---DVFAVGDCS 157
G+G + LV+S+ R + +D++L+V ++ V A+GDC+
Sbjct: 301 GLGTAPLVRSIIAAAGQPPRRRAVSVDKYLQVRGLEPRGSVLALGDCA 348
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 169 PALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVD 228
PA AQVA +QG+YL LN G+A R +D PF Y HLGS AT+G +A +D
Sbjct: 445 PATAQVANQQGEYLARELNAQGRA---RRAGVEDPAPTRPFEYVHLGSFATLGGEQAALD 501
Query: 229 LRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
+ G + ++W Y + VSWRN+ V ++W V+GRD SR+
Sbjct: 502 TSGSPLPGDFVSQGIGTMVLWYGVYFSNCVSWRNKAMVVLDWTKKGVWGRDSSRV 556
>gi|374309547|ref|YP_005055977.1| NADH dehydrogenase (ubiquinone) [Granulicella mallensis MP5ACTX8]
gi|358751557|gb|AEU34947.1| NADH dehydrogenase (ubiquinone) [Granulicella mallensis MP5ACTX8]
Length = 459
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 136/272 (50%), Gaps = 18/272 (6%)
Query: 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEAN-EILSSFDDRLRH 72
L+ V+VGGGPTGVE +G +SD + + + H+ V ++E + IL ++ + L+
Sbjct: 163 LNFVIVGGGPTGVELAGSISDIAKLYMTKDFRHIDPGTAQVLILEGSPNILGAYPEDLQK 222
Query: 73 YATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 131
A QL+ GVR+ G V D+ +++ D V +W+ GV S L K L +
Sbjct: 223 KAVEQLNALGVRVRTGAHVSDIQPGYVMVGD-ERVESVCTLWAAGVQASPLGKILGVETD 281
Query: 132 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191
G + +D+ L ++F +GD + + E GK V P +AQ A + G Y RIG
Sbjct: 282 RRGSVMVDDHLHPAGHSEIFVLGDLA-HFEQDGKQV-PGVAQPAMQMGAY---AAKRIGL 336
Query: 192 AGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRS 251
G+ ++ K PF Y G MATIGR A+ + + +GF++WL W
Sbjct: 337 LLEGKGDTQK------PFRYFDKGDMATIGRKAAVARIVWPFHAH---WSGFMAWLTWLV 387
Query: 252 AYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
++ ++ +RNR V WA T+V +D R+
Sbjct: 388 VHIFFLIGFRNRLSVFRQWAYTYVRFQDGVRL 419
>gi|284992244|ref|YP_003410798.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Geodermatophilus obscurus DSM 43160]
gi|284065489|gb|ADB76427.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Geodermatophilus obscurus DSM 43160]
Length = 474
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 136/277 (49%), Gaps = 33/277 (11%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIE-ANEILSSFD 67
E+ RLL VVVG GPTGVE +G++++ R +R+ + + V L++ A ++L F
Sbjct: 169 ERDRLLTFVVVGAGPTGVEMAGQIAELAHRTLRRDFRSIDPTQARVILLDAAPQVLPPFG 228
Query: 68 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGT----EVPYGLLVWSTGVGPSTL 122
++L A L++ GV + G +V D+D+ L + D + VW+ GV S L
Sbjct: 229 EKLGERARRHLNEIGVEVQLGAMVTDLDADGLEVKDRDGQVRRIQAATKVWAAGVQASPL 288
Query: 123 VKSLDLPKSP----GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 178
+ L GRI + L +P +V VGD + LP +AQVA +
Sbjct: 289 GRLLAEQSGAEIDRAGRINVLPDLTLPGHPEVHVVGDMMALDK------LPGVAQVAIQG 342
Query: 179 GKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGL 238
G+Y ++I + GR E PF YR G+MATI R+ A+ D+ K L
Sbjct: 343 GRY---AADQITRRIAGR-------EARGPFHYRDKGNMATISRFSAVADI------KNL 386
Query: 239 SLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFV 275
GF +W++W +L +V +++R ++W +F+
Sbjct: 387 KFEGFFAWVLWLVVHLMYIVGFKSRVTAVLHWMVSFL 423
>gi|436834759|ref|YP_007319975.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Fibrella aestuarina BUZ 2]
gi|384066172|emb|CCG99382.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Fibrella aestuarina BUZ 2]
Length = 455
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 32/269 (11%)
Query: 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRL 70
+ LL+ V+VGGGPTGVE +G L++ +++ DY + + N L DR+
Sbjct: 166 RQSLLNFVIVGGGPTGVELAGSLAEM------RKHVLPNDYPGLDFSKMNIYLVEGLDRV 219
Query: 71 ------RHYATTQ--LSKSG-VRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPST 121
A TQ L + G V V+ +V D + +G +P L+W+ GV +T
Sbjct: 220 LPPMSPESAAKTQGYLDELGVVTKVKTLVDSYDGDTVTFKNGETIPTQTLIWAAGVAGAT 279
Query: 122 LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKY 181
++ L GR +DE+ RV V+ V+AVGD + P +AQ A +QG++
Sbjct: 280 -IEGLPAESVEKGRYLVDEYNRVKGVEGVYAVGDVALMKTEKWPNGHPGVAQPAIQQGEH 338
Query: 182 LFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLA 241
L + L + + G R PF Y GS+A IGR +A+ DL K L L+
Sbjct: 339 LATNLTLLQRGGQLR-----------PFDYFDKGSLAIIGRVRAVADL-----PKKLHLS 382
Query: 242 GFLSWLVWRSAYLTRVVSWRNRFYVAVNW 270
GF++W+ W ++ ++ +R++ V NW
Sbjct: 383 GFIAWMAWLFVHIWYLIGFRSKLVVLSNW 411
>gi|78188269|ref|YP_378607.1| NADH dehydrogenase [Chlorobium chlorochromatii CaD3]
gi|78170468|gb|ABB27564.1| NADH dehydrogenase [Chlorobium chlorochromatii CaD3]
Length = 442
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 142/277 (51%), Gaps = 30/277 (10%)
Query: 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EILSSFD 67
E+ +LL V+VGGGPTGVE +G + + + + Y ++ + + ++EA IL SF
Sbjct: 168 ERKKLLTFVIVGGGPTGVELAGSIGEMSRYTLSKFYRNIDPKLTRIFIVEAAPRILGSFS 227
Query: 68 DRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 126
+ AT L K GV++ +V DVD + + + + ++W+ GV +++ +++
Sbjct: 228 PEMASKATRALEKLGVQVWTSSMVSDVDVNGVQIGN-ERIEAATVLWAAGVTATSISRNM 286
Query: 127 DLPKSPG-GRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
D ++ GRI ++ L + ++F GD + ++E T LP LA VA++QG+ +
Sbjct: 287 DGVETDAIGRIVVENDLSIFGHPEIFVGGDLA-HVEREDGTTLPGLAPVAQQQGRAIAH- 344
Query: 186 LNRIGKAGGGRANSAKDMELG--DPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGF 243
N +DM+ PF Y G MATIG+ KA+V++ + L G
Sbjct: 345 ------------NILRDMQAKARKPFRYTDKGQMATIGKNKAIVEMGR------LKFDGI 386
Query: 244 LSWLVWRSAYLTRVVSWRNRFYVAVNWA---TTFVFG 277
++WL W ++ + S+R+R +V + W T+ FG
Sbjct: 387 MAWLTWLMVHIYFLTSFRHRVFVLMQWGWSYFTYSFG 423
>gi|113971279|ref|YP_735072.1| NADH dehydrogenase [Shewanella sp. MR-4]
gi|113885963|gb|ABI40015.1| NADH dehydrogenase [Shewanella sp. MR-4]
Length = 429
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 127/246 (51%), Gaps = 18/246 (7%)
Query: 19 VVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDRLRHYATT 76
+VG G TGVE + EL I Y ++ K ++ V LIEA+ +IL +R+ A
Sbjct: 170 IVGAGATGVELAAELHHVIESVKEYGYLNISKHHLDVHLIEASPKILPQLPERVSARAQA 229
Query: 77 QLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGV-GPSTLVKSLDLPKSPGG 134
L K G+RL G+ VK+V I DG + GL VW+ GV GP LP +P
Sbjct: 230 VLDKIGIRLHIGVQVKEVTRDGFITQDGDVIEAGLKVWAAGVKGPKAFQNFSKLPITPRN 289
Query: 135 RIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF-SLLNRIGKAG 193
++ +D +RV QD++A+GDC+ + +G+ V P AQ A + L+ ++++R+
Sbjct: 290 QVEVDACMRVKGHQDIYALGDCALLILESGQPV-PPRAQAAAQMADTLYENIVSRL---- 344
Query: 194 GGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSAY 253
G+A PFVY+ GS+ ++ R+ A+ +L N S + G ++ +++ S Y
Sbjct: 345 QGKAEK--------PFVYKDYGSLVSLSRFSAIGNLMGNLRSGTFFVEGHIARIMYISLY 396
Query: 254 LTRVVS 259
+ S
Sbjct: 397 QRHLAS 402
>gi|328950100|ref|YP_004367435.1| NADH dehydrogenase (ubiquinone) [Marinithermus hydrothermalis DSM
14884]
gi|328450424|gb|AEB11325.1| NADH dehydrogenase (ubiquinone) [Marinithermus hydrothermalis DSM
14884]
Length = 430
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 122/269 (45%), Gaps = 23/269 (8%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD-YIHVTLIEANE-ILSSF 66
E K LL V+VGGGPTGVE +G L + +R+ Y + I + LIEA +L+
Sbjct: 150 ERKRALLTWVIVGGGPTGVELAGALGELRNHVIRRDYPELDPREIRILLIEAGPRVLAHL 209
Query: 67 DDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
YA L + G+ + R +V +V + L +G +P VWS GV + L
Sbjct: 210 SPASSAYAQRFLERLGIEVMTRAMVAEVTPSGVKLKNGAFIPSFTTVWSAGVAGAALP-- 267
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
LP GR+ L + V+ VGD + + P +AQVA +QG
Sbjct: 268 -GLPAERNGRVPTTPELHLEGDPHVYVVGDVNLLINPKTGRPYPQVAQVAIQQGTLAGRN 326
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
+ R + R PF Y+ G+M T+GR A++ E+ + L GF +
Sbjct: 327 IRRHLRGQPLR-----------PFQYKDKGNMVTLGRNHAVL------ETGRVRLTGFPA 369
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
W+ W +L + RNRF V NWA ++
Sbjct: 370 WVAWLGVHLMYLTGGRNRFMVMTNWAYSY 398
>gi|285808623|gb|ADC36141.1| NADH dehydrogenase [uncultured bacterium 162]
Length = 457
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 139/276 (50%), Gaps = 22/276 (7%)
Query: 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANE-ILSSFDDRLRH 72
L+ V++GGGPTGVE +G +SD +++ + H+ + V ++E + IL ++ L+
Sbjct: 164 LNFVIIGGGPTGVELAGAISDIAKLYMKKDFRHIDPAMAKVLILEGSPYILGAYPPDLQK 223
Query: 73 YATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVK----SLD 127
A QL+ GV+ G V DV +++ + ++ +W+ GV S L K +L
Sbjct: 224 KAVEQLTALGVQTRTGSHVTDVQPGYVMVGE-EKIESACTLWAAGVQASPLAKLLAPALG 282
Query: 128 LPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187
G + +DE L P +VF +GD + +++ GK V P +AQ A + G+Y
Sbjct: 283 CELDRRGCMLVDEHLNPPGHPEVFIIGDMAHFMQD-GKQV-PGVAQPAMQMGRY---AAK 337
Query: 188 RIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWL 247
RIG GRA K PF Y G MATIGR A+ + + +GF++W
Sbjct: 338 RIGLLMAGRAERQK------PFRYFDKGDMATIGRKAAVARIVWPFHAH---WSGFMAWA 388
Query: 248 VWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISRI 283
W ++ ++ +RNRF V WA T++ +D R+
Sbjct: 389 TWLVVHIFFLIGFRNRFSVFRQWAYTYLSFQDGVRL 424
>gi|402831418|ref|ZP_10880103.1| pyridine nucleotide-disulfide oxidoreductase [Capnocytophaga sp.
CM59]
gi|402282192|gb|EJU30752.1| pyridine nucleotide-disulfide oxidoreductase [Capnocytophaga sp.
CM59]
Length = 439
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 131/269 (48%), Gaps = 21/269 (7%)
Query: 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK-DYIHVTLIEAN-EILSSF 66
EE++ L++ V+VGGGPTGVE +G ++ + Y + ++V LI+A+ +L
Sbjct: 161 EERNSLMNFVIVGGGPTGVELAGAFAELKSHILPTDYPDLDIRKMNVNLIQADPRLLVGM 220
Query: 67 DDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 125
++ A L K GV + VKD D ++ N L+W+ GV ST ++
Sbjct: 221 GEKSSQKAKEYLEKMGVTIWFNTFVKDYDGTNVVTNTHN-FETRTLIWTAGVKGST-IEG 278
Query: 126 LDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSL 185
+ GR ++E+ + +D++A+GD + + P +AQ A +QGK L
Sbjct: 279 IPQESIQFGRYVVNEFSEIKGCKDIYAIGDIACMISDKYPKGHPMVAQPAIQQGKQLGKN 338
Query: 186 LNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLS 245
L R G+ N PF Y G+MAT+GR KA+V++ G+ +G+ +
Sbjct: 339 LKR---KIAGKKNLV-------PFSYFDKGAMATVGRNKAVVEI------AGMRFSGWFA 382
Query: 246 WLVWRSAYLTRVVSWRNRFYVAVNWATTF 274
W++W +L +V +RN+ NW +
Sbjct: 383 WILWMVVHLAFLVGFRNKMVALANWIVQY 411
>gi|24375021|ref|NP_719064.1| respiratory NADH dehydrogenase II Ndh [Shewanella oneidensis MR-1]
gi|24349762|gb|AAN56508.1| respiratory NADH dehydrogenase II Ndh [Shewanella oneidensis MR-1]
Length = 429
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 126/247 (51%), Gaps = 20/247 (8%)
Query: 19 VVGGGPTGVEFSGELSDFIMRDVRQRYSHV-KDYIHVTLIEAN-EILSSFDDRLRHYATT 76
+VG G TGVE + EL I Y ++ K ++ V LIEA+ +IL +R+ A
Sbjct: 170 IVGAGATGVELAAELHHVIESVKEYGYLNISKHHLDVHLIEASPKILPQLPERVSARAQA 229
Query: 77 QLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGV-GPSTLVKSLDLPKSPGG 134
L K G+RL G+ VK+V I DG + L VW+ GV GP LP +P
Sbjct: 230 VLDKIGIRLHIGVQVKEVTRDGFITQDGDMIKASLKVWAAGVKGPKAFQNFSKLPITPRN 289
Query: 135 RIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLF-SLLNRI-GKA 192
++ +D +RV QD++A+GDC+ + +G+ V P AQ A + L+ +++NR+ GK
Sbjct: 290 QVEVDACMRVKGQQDIYAIGDCALLILDSGQPV-PPRAQAAAQMADTLYENIVNRLQGK- 347
Query: 193 GGGRANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNKESKGLSLAGFLSWLVWRSA 252
+ PFVY+ GS+ ++ R+ A+ +L N S + G ++ L++ S
Sbjct: 348 ------------VEKPFVYKDYGSLVSLSRFSAVGNLMGNLRSGTFFVEGHIARLMYISL 395
Query: 253 YLTRVVS 259
Y + S
Sbjct: 396 YQRHLAS 402
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,646,664,477
Number of Sequences: 23463169
Number of extensions: 199455247
Number of successful extensions: 514545
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2637
Number of HSP's successfully gapped in prelim test: 7127
Number of HSP's that attempted gapping in prelim test: 496280
Number of HSP's gapped (non-prelim): 12690
length of query: 283
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 142
effective length of database: 9,050,888,538
effective search space: 1285226172396
effective search space used: 1285226172396
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)