Query 023375
Match_columns 283
No_of_seqs 305 out of 3249
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 05:43:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023375.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023375hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g6h_A Rotenone-insensitive NA 100.0 2.6E-52 8.9E-57 391.1 22.0 267 7-282 210-500 (502)
2 3hyw_A Sulfide-quinone reducta 100.0 7.3E-31 2.5E-35 241.6 22.3 221 50-281 178-423 (430)
3 4eqs_A Coenzyme A disulfide re 100.0 6.8E-28 2.3E-32 222.2 20.4 162 12-188 145-310 (437)
4 3sx6_A Sulfide-quinone reducta 100.0 6.2E-27 2.1E-31 215.7 20.6 229 14-261 149-406 (437)
5 3h28_A Sulfide-quinone reducta 99.9 8E-27 2.7E-31 214.5 20.0 244 14-277 142-412 (430)
6 2ywl_A Thioredoxin reductase r 99.9 5.2E-25 1.8E-29 178.7 17.8 151 15-191 2-171 (180)
7 2gqw_A Ferredoxin reductase; f 99.9 6.4E-25 2.2E-29 200.6 19.9 183 13-222 144-333 (408)
8 1xhc_A NADH oxidase /nitrite r 99.9 3.7E-25 1.3E-29 199.5 17.5 150 14-187 143-295 (367)
9 3ef6_A Toluene 1,2-dioxygenase 99.9 3.7E-25 1.3E-29 202.2 17.3 183 13-223 142-334 (410)
10 1ojt_A Surface protein; redox- 99.9 6.4E-25 2.2E-29 204.7 18.0 152 13-188 184-348 (482)
11 3lxd_A FAD-dependent pyridine 99.9 1.7E-24 5.8E-29 198.0 20.3 182 14-223 152-346 (415)
12 2wpf_A Trypanothione reductase 99.9 4.2E-24 1.4E-28 199.8 22.1 152 13-188 190-354 (495)
13 1v59_A Dihydrolipoamide dehydr 99.9 2.3E-24 8E-29 200.6 19.3 178 13-223 182-375 (478)
14 1onf_A GR, grase, glutathione 99.9 6.3E-24 2.2E-28 198.8 22.3 159 14-188 176-370 (500)
15 2hqm_A GR, grase, glutathione 99.9 1.9E-24 6.4E-29 201.4 18.4 152 13-188 184-346 (479)
16 3ntd_A FAD-dependent pyridine 99.9 1.8E-24 6E-29 205.3 18.5 162 12-188 149-337 (565)
17 1fec_A Trypanothione reductase 99.9 6.5E-24 2.2E-28 198.3 22.0 152 13-188 186-350 (490)
18 2bc0_A NADH oxidase; flavoprot 99.9 2.1E-24 7.3E-29 201.5 18.6 160 12-188 192-360 (490)
19 3fg2_P Putative rubredoxin red 99.9 2.3E-24 7.9E-29 196.5 18.1 183 13-223 141-335 (404)
20 1ges_A Glutathione reductase; 99.9 5.9E-24 2E-28 196.5 20.9 152 13-188 166-327 (450)
21 1zmd_A Dihydrolipoyl dehydroge 99.9 4.7E-24 1.6E-28 198.4 19.9 152 13-188 177-344 (474)
22 2a8x_A Dihydrolipoyl dehydroge 99.9 2E-24 7E-29 200.3 17.0 152 13-188 170-333 (464)
23 3ics_A Coenzyme A-disulfide re 99.9 2.7E-24 9.3E-29 205.1 18.3 162 12-188 185-352 (588)
24 3kd9_A Coenzyme A disulfide re 99.9 8.5E-24 2.9E-28 195.3 20.8 159 13-187 147-313 (449)
25 3iwa_A FAD-dependent pyridine 99.9 2.1E-24 7.2E-29 200.6 16.7 160 13-187 158-327 (472)
26 1mo9_A ORF3; nucleotide bindin 99.9 6.7E-24 2.3E-28 199.7 19.9 177 15-224 215-404 (523)
27 1dxl_A Dihydrolipoamide dehydr 99.9 4.5E-24 1.5E-28 198.2 17.8 152 13-188 176-341 (470)
28 2cdu_A NADPH oxidase; flavoenz 99.9 4.5E-24 1.5E-28 197.3 17.4 160 12-187 147-315 (452)
29 1ebd_A E3BD, dihydrolipoamide 99.9 4.8E-24 1.6E-28 197.3 16.7 152 13-188 169-332 (455)
30 1xdi_A RV3303C-LPDA; reductase 99.9 6.9E-24 2.4E-28 198.5 17.7 152 13-188 181-341 (499)
31 2qae_A Lipoamide, dihydrolipoy 99.9 7.1E-24 2.4E-28 196.9 17.5 153 13-188 173-339 (468)
32 2r9z_A Glutathione amide reduc 99.9 8.6E-24 2.9E-28 196.1 17.8 152 13-188 165-326 (463)
33 1q1r_A Putidaredoxin reductase 99.9 8.5E-24 2.9E-28 194.4 17.6 158 13-187 148-317 (431)
34 2eq6_A Pyruvate dehydrogenase 99.9 7.9E-24 2.7E-28 196.4 17.2 152 13-188 168-333 (464)
35 4dna_A Probable glutathione re 99.9 3.6E-23 1.2E-27 191.9 21.3 151 13-188 169-330 (463)
36 3cgb_A Pyridine nucleotide-dis 99.9 1.9E-23 6.6E-28 194.6 19.5 160 13-188 185-352 (480)
37 3h8l_A NADH oxidase; membrane 99.9 1.6E-23 5.6E-28 191.1 18.2 164 15-191 146-336 (409)
38 1m6i_A Programmed cell death p 99.9 8E-24 2.7E-28 197.8 16.2 163 13-187 179-350 (493)
39 4b1b_A TRXR, thioredoxin reduc 99.9 4.1E-23 1.4E-27 194.4 20.6 154 12-188 221-383 (542)
40 3vrd_B FCCB subunit, flavocyto 99.9 1.1E-23 3.8E-28 191.5 16.2 203 24-252 163-385 (401)
41 3ic9_A Dihydrolipoamide dehydr 99.9 4.9E-23 1.7E-27 192.4 19.9 152 13-189 173-338 (492)
42 2yqu_A 2-oxoglutarate dehydrog 99.9 2.9E-23 9.8E-28 192.1 18.1 152 13-188 166-326 (455)
43 3dgz_A Thioredoxin reductase 2 99.9 8.3E-23 2.8E-27 190.7 21.4 153 13-188 184-351 (488)
44 3dgh_A TRXR-1, thioredoxin red 99.9 9.1E-23 3.1E-27 190.1 21.1 152 13-188 186-351 (483)
45 3dk9_A Grase, GR, glutathione 99.9 1E-22 3.6E-27 189.5 21.4 153 13-189 186-356 (478)
46 3lad_A Dihydrolipoamide dehydr 99.9 6.7E-23 2.3E-27 190.6 20.1 153 12-188 178-342 (476)
47 2zbw_A Thioredoxin reductase; 99.9 3.1E-23 1.1E-27 183.7 16.8 155 13-191 151-317 (335)
48 3urh_A Dihydrolipoyl dehydroge 99.9 2.5E-23 8.4E-28 194.4 17.0 153 12-188 196-362 (491)
49 3klj_A NAD(FAD)-dependent dehy 99.9 5.6E-24 1.9E-28 192.9 11.8 144 14-188 146-293 (385)
50 2v3a_A Rubredoxin reductase; a 99.9 6.8E-23 2.3E-27 185.6 18.6 153 13-187 144-304 (384)
51 3oc4_A Oxidoreductase, pyridin 99.9 2.9E-23 9.8E-28 192.0 16.3 160 12-188 145-313 (452)
52 3l8k_A Dihydrolipoyl dehydroge 99.9 9.3E-23 3.2E-27 189.3 19.3 148 13-188 171-332 (466)
53 3o0h_A Glutathione reductase; 99.9 7.2E-23 2.5E-27 190.9 18.6 152 13-188 190-350 (484)
54 1nhp_A NADH peroxidase; oxidor 99.9 6E-23 2E-27 189.6 17.3 158 13-187 148-314 (447)
55 1lvl_A Dihydrolipoamide dehydr 99.9 4.2E-23 1.4E-27 191.2 16.2 151 13-188 170-329 (458)
56 1zk7_A HGII, reductase, mercur 99.9 1.4E-22 4.8E-27 188.1 18.0 150 13-188 175-333 (467)
57 3qfa_A Thioredoxin reductase 1 99.9 4.9E-22 1.7E-26 186.8 21.7 153 13-188 209-379 (519)
58 3f8d_A Thioredoxin reductase ( 99.9 2.3E-22 7.9E-27 176.6 17.7 155 12-192 152-318 (323)
59 2x8g_A Thioredoxin glutathione 99.9 6.9E-22 2.3E-26 188.8 21.3 153 13-188 285-458 (598)
60 3cty_A Thioredoxin reductase; 99.9 3.5E-22 1.2E-26 176.0 17.3 152 12-191 153-316 (319)
61 1trb_A Thioredoxin reductase; 99.9 4.1E-22 1.4E-26 175.3 16.9 153 12-191 143-314 (320)
62 2q0l_A TRXR, thioredoxin reduc 99.9 4.3E-22 1.5E-26 174.6 17.0 151 13-191 142-309 (311)
63 2q7v_A Thioredoxin reductase; 99.9 6.9E-22 2.3E-26 174.5 17.6 152 12-191 150-312 (325)
64 3ab1_A Ferredoxin--NADP reduct 99.9 4E-22 1.4E-26 178.6 15.2 155 13-191 162-328 (360)
65 3fbs_A Oxidoreductase; structu 99.9 3.6E-22 1.2E-26 173.4 13.9 149 12-191 139-292 (297)
66 1fl2_A Alkyl hydroperoxide red 99.9 1.7E-21 6E-26 170.6 17.8 151 12-191 142-305 (310)
67 3r9u_A Thioredoxin reductase; 99.9 1.2E-21 4.2E-26 171.5 16.5 153 12-191 145-312 (315)
68 3lzw_A Ferredoxin--NADP reduct 99.9 9.8E-22 3.4E-26 173.3 15.4 153 12-191 152-315 (332)
69 3itj_A Thioredoxin reductase 1 99.9 1E-21 3.4E-26 173.7 15.4 151 12-191 171-335 (338)
70 1vdc_A NTR, NADPH dependent th 99.9 5.3E-21 1.8E-25 169.2 17.2 153 12-191 157-323 (333)
71 2a87_A TRXR, TR, thioredoxin r 99.9 4.3E-21 1.5E-25 170.3 15.6 150 13-191 154-316 (335)
72 3d1c_A Flavin-containing putat 99.9 9.7E-21 3.3E-25 169.7 16.6 159 13-191 165-339 (369)
73 2vdc_G Glutamate synthase [NAD 99.8 8.3E-21 2.8E-25 175.5 14.3 152 12-191 262-444 (456)
74 4a9w_A Monooxygenase; baeyer-v 99.8 8.5E-21 2.9E-25 168.7 13.6 156 12-191 161-352 (357)
75 4gcm_A TRXR, thioredoxin reduc 99.8 1.6E-20 5.5E-25 164.9 14.1 151 12-191 143-306 (312)
76 1hyu_A AHPF, alkyl hydroperoxi 99.8 7.2E-20 2.5E-24 172.1 17.6 150 12-191 353-516 (521)
77 4a5l_A Thioredoxin reductase; 99.8 4.5E-20 1.6E-24 161.8 14.1 151 12-191 150-312 (314)
78 4fk1_A Putative thioredoxin re 99.8 7.1E-20 2.4E-24 160.4 14.8 149 13-191 145-300 (304)
79 1gte_A Dihydropyrimidine dehyd 99.8 3.3E-18 1.1E-22 172.3 17.6 150 14-191 332-508 (1025)
80 1lqt_A FPRA; NADP+ derivative, 99.8 2.9E-18 9.9E-23 158.6 12.9 168 13-191 146-387 (456)
81 1cjc_A Protein (adrenodoxin re 99.8 4.2E-18 1.4E-22 157.7 13.3 167 13-191 144-395 (460)
82 2cul_A Glucose-inhibited divis 99.8 5.3E-18 1.8E-22 143.0 12.8 152 15-190 4-231 (232)
83 2xve_A Flavin-containing monoo 99.8 9.5E-18 3.2E-22 155.5 15.5 138 12-188 195-338 (464)
84 3s5w_A L-ornithine 5-monooxyge 99.7 1.9E-17 6.6E-22 153.0 13.9 160 13-191 226-449 (463)
85 3k30_A Histamine dehydrogenase 99.7 5.8E-18 2E-22 164.1 9.6 143 13-191 522-675 (690)
86 1o94_A Tmadh, trimethylamine d 99.7 1.1E-17 3.7E-22 163.1 10.7 144 13-190 527-699 (729)
87 2gag_A Heterotetrameric sarcos 99.7 2.1E-16 7.2E-21 158.2 11.7 139 14-191 284-444 (965)
88 2gv8_A Monooxygenase; FMO, FAD 99.7 4.3E-16 1.5E-20 143.6 12.1 138 12-188 210-359 (447)
89 1ps9_A 2,4-dienoyl-COA reducta 99.6 6.2E-16 2.1E-20 149.5 12.4 149 13-186 493-671 (671)
90 1y56_A Hypothetical protein PH 99.6 5.3E-15 1.8E-19 138.0 11.5 103 76-190 265-376 (493)
91 3gwf_A Cyclohexanone monooxyge 99.6 4.8E-15 1.6E-19 139.7 11.2 103 80-191 342-457 (540)
92 1w4x_A Phenylacetone monooxyge 99.5 2.4E-13 8.2E-18 128.2 13.5 102 81-191 351-466 (542)
93 3uox_A Otemo; baeyer-villiger 99.5 1.6E-13 5.5E-18 129.4 11.9 103 81-191 351-466 (545)
94 4ap3_A Steroid monooxygenase; 99.4 1.4E-12 4.9E-17 123.1 15.2 103 81-191 356-471 (549)
95 1rp0_A ARA6, thiazole biosynth 99.4 2.9E-12 1E-16 111.0 11.0 160 15-191 40-275 (284)
96 3klj_A NAD(FAD)-dependent dehy 99.1 5.5E-10 1.9E-14 100.8 10.2 94 13-120 8-117 (385)
97 3hyw_A Sulfide-quinone reducta 99.0 1.1E-10 3.9E-15 106.8 4.7 94 15-120 3-110 (430)
98 3f8d_A Thioredoxin reductase ( 99.0 1E-09 3.5E-14 95.5 9.6 93 14-120 15-126 (323)
99 3vrd_B FCCB subunit, flavocyto 99.0 4.3E-10 1.5E-14 101.7 7.2 95 14-120 2-109 (401)
100 4a9w_A Monooxygenase; baeyer-v 99.0 2.1E-09 7.2E-14 94.8 11.4 91 15-120 4-133 (357)
101 3sx6_A Sulfide-quinone reducta 99.0 7.8E-10 2.7E-14 101.4 8.3 96 14-120 4-113 (437)
102 3fbs_A Oxidoreductase; structu 99.0 2.1E-09 7.2E-14 92.5 10.5 92 15-120 3-113 (297)
103 3itj_A Thioredoxin reductase 1 99.0 2.1E-09 7.3E-14 94.2 9.8 96 11-120 19-143 (338)
104 2q7v_A Thioredoxin reductase; 98.9 5.4E-09 1.9E-13 91.6 11.3 93 14-120 8-124 (325)
105 3r9u_A Thioredoxin reductase; 98.9 6.6E-09 2.3E-13 90.1 11.2 94 13-120 3-119 (315)
106 2zbw_A Thioredoxin reductase; 98.9 1.5E-08 5.2E-13 88.9 13.6 91 14-118 5-120 (335)
107 4b63_A L-ornithine N5 monooxyg 98.9 1.7E-08 6E-13 94.1 14.4 87 96-186 386-483 (501)
108 2q0l_A TRXR, thioredoxin reduc 98.9 8E-09 2.7E-13 89.8 11.2 92 15-120 2-115 (311)
109 3lzw_A Ferredoxin--NADP reduct 98.9 3.4E-09 1.1E-13 92.7 8.6 89 14-117 7-121 (332)
110 3ab1_A Ferredoxin--NADP reduct 98.9 5.3E-08 1.8E-12 86.5 15.9 92 14-119 14-131 (360)
111 3ef6_A Toluene 1,2-dioxygenase 98.9 7.5E-09 2.6E-13 94.0 10.2 94 15-120 3-112 (410)
112 1q1r_A Putidaredoxin reductase 98.9 4.5E-09 1.5E-13 96.2 8.7 94 15-120 5-115 (431)
113 3cty_A Thioredoxin reductase; 98.9 1.2E-08 4.2E-13 89.0 10.5 102 4-120 6-127 (319)
114 3h8l_A NADH oxidase; membrane 98.8 1.7E-09 5.8E-14 98.1 4.9 95 15-120 2-114 (409)
115 3alj_A 2-methyl-3-hydroxypyrid 98.8 4.3E-08 1.5E-12 87.9 14.0 93 14-120 11-161 (379)
116 1fl2_A Alkyl hydroperoxide red 98.8 1.3E-08 4.5E-13 88.3 10.2 92 15-120 2-116 (310)
117 2bry_A NEDD9 interacting prote 98.8 2.5E-08 8.5E-13 92.9 11.8 94 13-120 91-231 (497)
118 2a87_A TRXR, TR, thioredoxin r 98.8 2E-08 6.9E-13 88.4 10.5 93 14-120 14-127 (335)
119 3lxd_A FAD-dependent pyridine 98.8 1.2E-08 4E-13 92.8 9.2 96 13-120 8-120 (415)
120 4a5l_A Thioredoxin reductase; 98.8 3.2E-08 1.1E-12 85.9 11.5 92 15-120 5-122 (314)
121 3fg2_P Putative rubredoxin red 98.8 8E-09 2.8E-13 93.6 7.9 94 15-120 2-111 (404)
122 3h28_A Sulfide-quinone reducta 98.8 2.7E-09 9.1E-14 97.6 4.5 94 15-120 3-110 (430)
123 4fk1_A Putative thioredoxin re 98.8 2.2E-08 7.6E-13 87.0 10.2 92 15-120 7-118 (304)
124 3d1c_A Flavin-containing putat 98.8 5.3E-08 1.8E-12 86.5 12.7 92 15-121 5-145 (369)
125 3nlc_A Uncharacterized protein 98.8 2E-08 7E-13 94.4 10.0 102 15-130 108-291 (549)
126 3oz2_A Digeranylgeranylglycero 98.8 1.5E-07 5E-12 84.0 15.2 90 16-119 6-162 (397)
127 2gqw_A Ferredoxin reductase; f 98.8 1.5E-08 5.2E-13 92.0 8.7 96 13-120 6-114 (408)
128 1trb_A Thioredoxin reductase; 98.8 5.2E-08 1.8E-12 84.9 11.2 92 15-120 6-117 (320)
129 4ap3_A Steroid monooxygenase; 98.7 9E-08 3.1E-12 90.2 13.4 94 13-120 20-162 (549)
130 1vdc_A NTR, NADPH dependent th 98.7 3.3E-08 1.1E-12 86.6 9.4 92 14-120 8-125 (333)
131 3kd9_A Coenzyme A disulfide re 98.7 3E-08 1E-12 91.1 8.9 95 14-120 3-115 (449)
132 1hyu_A AHPF, alkyl hydroperoxi 98.7 5.5E-08 1.9E-12 91.1 10.7 94 13-120 211-327 (521)
133 3v76_A Flavoprotein; structura 98.7 7.7E-08 2.6E-12 87.6 11.1 91 15-120 28-188 (417)
134 1xhc_A NADH oxidase /nitrite r 98.7 5.3E-08 1.8E-12 87.2 9.5 92 13-120 7-114 (367)
135 4gcm_A TRXR, thioredoxin reduc 98.7 1.2E-07 4.1E-12 82.5 11.4 92 15-120 7-117 (312)
136 2r9z_A Glutathione amide reduc 98.7 6.4E-08 2.2E-12 89.3 10.0 92 14-120 4-143 (463)
137 2gqf_A Hypothetical protein HI 98.7 1.5E-07 5.1E-12 85.3 12.1 91 15-120 5-169 (401)
138 2xve_A Flavin-containing monoo 98.7 1.6E-07 5.6E-12 86.6 12.4 92 15-120 3-169 (464)
139 3gwf_A Cyclohexanone monooxyge 98.7 2E-07 7E-12 87.6 13.2 90 14-117 8-145 (540)
140 3oc4_A Oxidoreductase, pyridin 98.7 4.3E-08 1.5E-12 90.1 8.4 94 15-120 3-116 (452)
141 1ges_A Glutathione reductase; 98.7 1E-07 3.5E-12 87.6 10.8 92 14-120 4-144 (450)
142 1lvl_A Dihydrolipoamide dehydr 98.6 1.5E-07 5.1E-12 86.7 11.2 92 14-120 5-147 (458)
143 3o0h_A Glutathione reductase; 98.6 1.1E-07 3.8E-12 88.2 10.2 92 15-120 27-167 (484)
144 1m6i_A Programmed cell death p 98.6 3.2E-08 1.1E-12 92.1 6.3 96 13-120 10-145 (493)
145 4eqs_A Coenzyme A disulfide re 98.6 9.7E-08 3.3E-12 87.5 9.3 93 16-120 2-117 (437)
146 3uox_A Otemo; baeyer-villiger 98.6 3.1E-07 1.1E-11 86.4 12.9 93 14-120 9-150 (545)
147 2x3n_A Probable FAD-dependent 98.6 2E-07 6.7E-12 84.0 11.0 92 15-120 7-167 (399)
148 3iwa_A FAD-dependent pyridine 98.6 9.2E-08 3.1E-12 88.4 8.9 94 15-120 4-126 (472)
149 3l8k_A Dihydrolipoyl dehydroge 98.6 7.9E-08 2.7E-12 88.7 8.4 92 15-120 5-145 (466)
150 2gv8_A Monooxygenase; FMO, FAD 98.6 1.4E-07 4.9E-12 86.5 10.0 91 14-118 6-176 (447)
151 2i0z_A NAD(FAD)-utilizing dehy 98.6 2.3E-07 7.7E-12 85.2 11.3 93 13-119 25-191 (447)
152 2vdc_G Glutamate synthase [NAD 98.6 3.9E-08 1.3E-12 90.7 5.8 89 12-119 120-219 (456)
153 2cdu_A NADPH oxidase; flavoenz 98.6 1.9E-07 6.6E-12 85.7 10.3 94 15-120 1-118 (452)
154 1onf_A GR, grase, glutathione 98.6 5.1E-08 1.7E-12 90.9 6.4 92 15-120 3-154 (500)
155 1nhp_A NADH peroxidase; oxidor 98.6 7.1E-08 2.4E-12 88.5 7.3 94 15-120 1-116 (447)
156 4dna_A Probable glutathione re 98.6 1.1E-07 3.7E-12 87.7 8.4 92 15-120 6-146 (463)
157 2eq6_A Pyruvate dehydrogenase 98.6 2.8E-07 9.7E-12 84.9 11.1 91 15-120 7-144 (464)
158 3ntd_A FAD-dependent pyridine 98.6 1.9E-07 6.4E-12 88.1 10.1 94 15-120 2-118 (565)
159 1ryi_A Glycine oxidase; flavop 98.6 3.4E-07 1.2E-11 81.7 11.1 58 69-127 165-227 (382)
160 1zk7_A HGII, reductase, mercur 98.6 3E-07 1E-11 84.8 10.9 93 14-120 4-151 (467)
161 3s5w_A L-ornithine 5-monooxyge 98.6 1.6E-07 5.6E-12 86.3 9.1 98 14-120 30-193 (463)
162 3ics_A Coenzyme A-disulfide re 98.6 3.3E-07 1.1E-11 87.0 11.4 97 12-120 34-153 (588)
163 1fec_A Trypanothione reductase 98.6 2.2E-07 7.6E-12 86.3 10.0 92 15-120 4-164 (490)
164 3cgb_A Pyridine nucleotide-dis 98.5 3.7E-07 1.3E-11 84.5 10.9 95 14-120 36-153 (480)
165 4g6h_A Rotenone-insensitive NA 98.5 4.6E-08 1.6E-12 91.2 4.7 94 14-121 42-171 (502)
166 3urh_A Dihydrolipoyl dehydroge 98.5 4E-07 1.4E-11 84.5 10.5 93 14-120 25-171 (491)
167 2yqu_A 2-oxoglutarate dehydrog 98.5 2.8E-07 9.5E-12 84.7 9.2 92 15-120 2-142 (455)
168 2bc0_A NADH oxidase; flavoprot 98.5 5.1E-07 1.7E-11 83.8 11.1 94 15-120 36-150 (490)
169 2wpf_A Trypanothione reductase 98.5 2.2E-07 7.7E-12 86.4 8.6 92 15-120 8-168 (495)
170 1dxl_A Dihydrolipoamide dehydr 98.5 5.9E-07 2E-11 82.8 11.2 93 14-120 6-152 (470)
171 1mo9_A ORF3; nucleotide bindin 98.5 4E-07 1.4E-11 85.3 10.2 92 14-120 43-187 (523)
172 2vou_A 2,6-dihydroxypyridine h 98.5 5.5E-07 1.9E-11 81.1 10.6 93 14-120 5-154 (397)
173 1ebd_A E3BD, dihydrolipoamide 98.5 4.1E-07 1.4E-11 83.6 9.8 92 15-120 4-146 (455)
174 1zmd_A Dihydrolipoyl dehydroge 98.5 4.8E-07 1.6E-11 83.6 10.2 92 15-120 7-153 (474)
175 3nix_A Flavoprotein/dehydrogen 98.5 6.7E-07 2.3E-11 80.9 10.6 91 15-119 6-166 (421)
176 2hqm_A GR, grase, glutathione 98.5 3E-07 1E-11 85.1 8.2 93 14-120 11-161 (479)
177 2qae_A Lipoamide, dihydrolipoy 98.5 6.2E-07 2.1E-11 82.7 10.3 92 15-120 3-149 (468)
178 1xdi_A RV3303C-LPDA; reductase 98.5 6.6E-07 2.3E-11 83.2 10.1 92 15-120 3-157 (499)
179 3dme_A Conserved exported prot 98.5 9.7E-07 3.3E-11 78.0 10.8 59 70-128 152-219 (369)
180 1yvv_A Amine oxidase, flavin-c 98.4 1.5E-06 5.2E-11 76.0 11.9 90 15-118 3-161 (336)
181 1y56_B Sarcosine oxidase; dehy 98.4 1E-06 3.4E-11 78.7 10.8 56 71-127 152-213 (382)
182 3ces_A MNMG, tRNA uridine 5-ca 98.4 1.4E-06 4.6E-11 83.1 11.8 92 15-120 29-182 (651)
183 3fpz_A Thiazole biosynthetic e 98.4 5.2E-08 1.8E-12 85.6 1.8 54 135-191 272-325 (326)
184 1k0i_A P-hydroxybenzoate hydro 98.4 1.8E-06 6E-11 77.5 11.8 92 15-120 3-164 (394)
185 1w4x_A Phenylacetone monooxyge 98.4 1.9E-06 6.7E-11 80.9 12.5 92 15-120 17-155 (542)
186 1cjc_A Protein (adrenodoxin re 98.4 1.4E-07 4.9E-12 87.0 4.2 90 13-119 5-106 (460)
187 2gag_B Heterotetrameric sarcos 98.4 1.1E-06 3.9E-11 78.8 10.1 58 69-127 175-238 (405)
188 2zxi_A TRNA uridine 5-carboxym 98.4 2.1E-06 7.1E-11 81.6 12.2 92 15-120 28-181 (637)
189 1gte_A Dihydropyrimidine dehyd 98.4 1.4E-07 4.9E-12 95.1 4.5 91 13-120 186-289 (1025)
190 3dk9_A Grase, GR, glutathione 98.4 4E-07 1.4E-11 84.2 7.0 92 14-120 20-161 (478)
191 1lqt_A FPRA; NADP+ derivative, 98.4 1.2E-07 4.2E-12 87.3 3.4 93 14-119 3-108 (456)
192 2a8x_A Dihydrolipoyl dehydroge 98.4 7.3E-07 2.5E-11 82.1 8.4 92 15-120 4-147 (464)
193 3rp8_A Flavoprotein monooxygen 98.4 2.2E-06 7.6E-11 77.3 11.5 93 12-120 21-182 (407)
194 3k7m_X 6-hydroxy-L-nicotine ox 98.4 2E-06 6.9E-11 78.0 10.9 76 79-157 215-306 (431)
195 2uzz_A N-methyl-L-tryptophan o 98.4 2.4E-06 8.3E-11 75.8 11.1 54 70-124 151-209 (372)
196 3i3l_A Alkylhalidase CMLS; fla 98.4 3.8E-06 1.3E-10 79.7 13.0 93 14-120 23-189 (591)
197 3cp8_A TRNA uridine 5-carboxym 98.3 2.4E-06 8.4E-11 81.3 11.3 93 14-120 21-175 (641)
198 2v3a_A Rubredoxin reductase; a 98.3 4.3E-07 1.5E-11 81.6 5.9 93 15-120 5-114 (384)
199 2gf3_A MSOX, monomeric sarcosi 98.3 3.6E-06 1.2E-10 75.1 11.9 58 69-127 151-213 (389)
200 3jsk_A Cypbp37 protein; octame 98.3 1E-05 3.6E-10 71.3 14.2 160 14-191 79-335 (344)
201 3lad_A Dihydrolipoamide dehydr 98.3 1.4E-06 4.7E-11 80.5 9.0 92 15-120 4-155 (476)
202 1ojt_A Surface protein; redox- 98.3 1.5E-06 5E-11 80.5 9.2 92 15-120 7-161 (482)
203 1y0p_A Fumarate reductase flav 98.3 2.4E-06 8.3E-11 80.8 10.7 51 70-120 257-318 (571)
204 3qfa_A Thioredoxin reductase 1 98.3 4.6E-06 1.6E-10 78.0 12.2 92 15-120 33-186 (519)
205 2gjc_A Thiazole biosynthetic e 98.3 3.3E-06 1.1E-10 74.1 10.5 160 15-190 66-324 (326)
206 3ps9_A TRNA 5-methylaminomethy 98.3 6.3E-06 2.1E-10 79.5 12.8 56 74-129 423-483 (676)
207 3cgv_A Geranylgeranyl reductas 98.3 4.6E-06 1.6E-10 74.6 11.1 91 15-119 5-162 (397)
208 2x8g_A Thioredoxin glutathione 98.3 5.3E-06 1.8E-10 78.8 11.8 94 13-120 106-262 (598)
209 3qj4_A Renalase; FAD/NAD(P)-bi 98.3 2.9E-06 1E-10 74.7 9.4 38 80-117 121-163 (342)
210 1v59_A Dihydrolipoamide dehydr 98.3 1.6E-06 5.5E-11 80.1 8.0 92 15-120 6-158 (478)
211 1qo8_A Flavocytochrome C3 fuma 98.3 4.9E-06 1.7E-10 78.6 11.4 51 70-120 252-313 (566)
212 3fmw_A Oxygenase; mithramycin, 98.3 4.7E-06 1.6E-10 78.8 11.3 91 15-119 50-207 (570)
213 3dgz_A Thioredoxin reductase 2 98.3 4.7E-06 1.6E-10 77.2 11.0 93 14-120 6-160 (488)
214 2xdo_A TETX2 protein; tetracyc 98.2 4.3E-06 1.5E-10 75.3 9.9 93 14-120 26-183 (398)
215 3k30_A Histamine dehydrogenase 98.2 6.3E-07 2.2E-11 86.7 4.3 86 13-120 390-489 (690)
216 3dgh_A TRXR-1, thioredoxin red 98.2 9E-06 3.1E-10 75.2 11.9 94 13-120 8-163 (483)
217 3ic9_A Dihydrolipoamide dehydr 98.2 4.5E-06 1.5E-10 77.5 9.7 92 15-120 9-149 (492)
218 4hb9_A Similarities with proba 98.2 7.9E-06 2.7E-10 73.2 11.0 92 15-120 2-167 (412)
219 2qa2_A CABE, polyketide oxygen 98.2 1.6E-05 5.6E-10 73.9 13.4 95 12-120 10-167 (499)
220 3atr_A Conserved archaeal prot 98.2 2.6E-06 9E-11 78.1 7.6 92 15-120 7-163 (453)
221 2oln_A NIKD protein; flavoprot 98.2 1.4E-05 4.9E-10 71.6 12.3 55 72-127 157-216 (397)
222 3c4n_A Uncharacterized protein 98.2 5.1E-06 1.8E-10 75.0 9.2 58 70-128 174-246 (405)
223 2aqj_A Tryptophan halogenase, 98.2 1.5E-05 5.2E-10 74.7 12.7 49 72-120 169-223 (538)
224 3e1t_A Halogenase; flavoprotei 98.2 1.3E-05 4.4E-10 74.7 12.1 92 15-120 8-173 (512)
225 1ps9_A 2,4-dienoyl-COA reducta 98.2 2.5E-06 8.5E-11 82.3 7.3 83 13-120 372-468 (671)
226 2qa1_A PGAE, polyketide oxygen 98.2 1.5E-05 5E-10 74.2 12.1 95 12-120 9-166 (500)
227 3ihg_A RDME; flavoenzyme, anth 98.2 1.1E-05 3.6E-10 75.7 11.2 51 69-119 121-183 (535)
228 1d4d_A Flavocytochrome C fumar 98.2 1.1E-05 3.6E-10 76.4 11.0 51 70-120 257-318 (572)
229 2gmh_A Electron transfer flavo 98.1 1.4E-05 4.6E-10 75.9 11.7 52 69-120 145-218 (584)
230 3pvc_A TRNA 5-methylaminomethy 98.1 1.5E-05 5.1E-10 77.1 12.0 56 74-129 418-479 (689)
231 3nyc_A D-arginine dehydrogenas 98.1 5.4E-06 1.8E-10 73.6 7.8 56 71-127 157-217 (381)
232 3c96_A Flavin-containing monoo 98.1 2.2E-05 7.5E-10 70.9 10.8 92 15-120 5-170 (410)
233 2gag_A Heterotetrameric sarcos 98.1 9.4E-06 3.2E-10 81.4 9.0 93 14-120 128-254 (965)
234 1pj5_A N,N-dimethylglycine oxi 98.1 1.7E-05 5.7E-10 78.3 10.7 57 70-127 153-215 (830)
235 1o94_A Tmadh, trimethylamine d 98.1 1.3E-06 4.3E-11 85.1 2.5 87 13-120 388-492 (729)
236 3c4a_A Probable tryptophan hyd 98.0 5.7E-06 2E-10 74.0 5.3 85 15-120 1-144 (381)
237 1y56_A Hypothetical protein PH 98.0 3.8E-06 1.3E-10 78.0 4.2 91 14-120 108-220 (493)
238 3dje_A Fructosyl amine: oxygen 97.9 6.3E-05 2.2E-09 68.3 11.4 55 69-123 162-225 (438)
239 2e4g_A Tryptophan halogenase; 97.9 9.6E-05 3.3E-09 69.5 12.8 51 70-120 196-253 (550)
240 2qcu_A Aerobic glycerol-3-phos 97.9 5.6E-05 1.9E-09 70.2 10.3 55 70-124 151-215 (501)
241 2pyx_A Tryptophan halogenase; 97.9 0.00012 4E-09 68.4 12.6 49 72-120 179-234 (526)
242 4b1b_A TRXR, thioredoxin reduc 97.9 8.8E-05 3E-09 69.6 11.4 91 16-120 44-198 (542)
243 3nrn_A Uncharacterized protein 97.9 0.00015 5.1E-09 65.5 12.5 44 76-119 197-243 (421)
244 4at0_A 3-ketosteroid-delta4-5a 97.8 0.00012 4.2E-09 68.1 11.9 51 69-119 203-264 (510)
245 2e5v_A L-aspartate oxidase; ar 97.8 3.5E-07 1.2E-11 84.6 -5.4 141 16-188 214-366 (472)
246 2weu_A Tryptophan 5-halogenase 97.8 0.00014 4.7E-09 67.6 12.2 52 69-120 174-231 (511)
247 3da1_A Glycerol-3-phosphate de 97.8 5.7E-05 2E-09 71.2 9.2 59 70-128 172-241 (561)
248 2e5v_A L-aspartate oxidase; ar 97.8 0.00011 3.9E-09 67.7 10.1 49 71-120 122-177 (472)
249 2dkh_A 3-hydroxybenzoate hydro 97.7 0.00011 3.9E-09 70.3 9.6 52 69-120 142-212 (639)
250 2r0c_A REBC; flavin adenine di 97.6 0.00043 1.5E-08 65.0 11.9 49 69-120 139-197 (549)
251 3axb_A Putative oxidoreductase 97.6 0.00044 1.5E-08 62.9 11.5 58 69-127 182-262 (448)
252 4b63_A L-ornithine N5 monooxyg 97.6 0.00025 8.6E-09 65.8 9.8 106 15-120 40-215 (501)
253 3kkj_A Amine oxidase, flavin-c 97.4 9.2E-05 3.1E-09 61.2 4.1 32 15-60 3-34 (336)
254 2rgh_A Alpha-glycerophosphate 97.3 0.00092 3.1E-08 63.1 10.0 52 74-125 194-256 (571)
255 1pn0_A Phenol 2-monooxygenase; 97.3 0.0014 5E-08 62.9 11.1 21 15-35 9-29 (665)
256 4gut_A Lysine-specific histone 97.3 0.0025 8.6E-08 62.2 12.6 37 81-117 542-583 (776)
257 1kf6_A Fumarate reductase flav 97.2 0.001 3.4E-08 63.3 9.3 51 70-120 136-198 (602)
258 2wdq_A Succinate dehydrogenase 97.2 0.0031 1.1E-07 59.6 12.7 48 73-120 148-207 (588)
259 1chu_A Protein (L-aspartate ox 97.1 0.0012 4E-08 62.0 8.1 31 15-60 9-39 (540)
260 2h88_A Succinate dehydrogenase 97.0 0.0058 2E-07 58.2 11.9 47 74-120 161-218 (621)
261 4dgk_A Phytoene dehydrogenase; 96.9 0.00048 1.6E-08 63.5 3.8 42 77-118 230-277 (501)
262 3eag_A UDP-N-acetylmuramate:L- 96.5 0.0069 2.4E-07 52.9 8.0 75 13-120 3-79 (326)
263 3ihm_A Styrene monooxygenase A 96.5 0.002 6.8E-08 58.5 4.4 32 15-60 23-54 (430)
264 3ka7_A Oxidoreductase; structu 96.4 0.0027 9.2E-08 57.1 4.7 43 76-119 204-252 (425)
265 2iid_A L-amino-acid oxidase; f 96.4 0.0035 1.2E-07 57.7 5.4 33 14-60 33-65 (498)
266 3lk7_A UDP-N-acetylmuramoylala 96.3 0.0061 2.1E-07 55.7 6.8 77 13-120 8-85 (451)
267 1c0p_A D-amino acid oxidase; a 96.3 0.0041 1.4E-07 54.7 5.2 32 15-60 7-38 (363)
268 4gde_A UDP-galactopyranose mut 96.3 0.0031 1.1E-07 58.1 4.5 38 80-117 234-274 (513)
269 3nks_A Protoporphyrinogen oxid 96.2 0.0034 1.2E-07 57.3 4.3 32 15-60 3-36 (477)
270 2e1m_A L-glutamate oxidase; L- 96.1 0.0047 1.6E-07 55.1 4.8 34 13-60 43-76 (376)
271 3dfz_A SIRC, precorrin-2 dehyd 96.1 0.0066 2.2E-07 50.1 5.1 75 13-120 30-104 (223)
272 2jae_A L-amino acid oxidase; o 96.0 0.0062 2.1E-07 55.9 5.2 33 14-60 11-43 (489)
273 3g5s_A Methylenetetrahydrofola 96.0 0.0053 1.8E-07 55.0 4.3 32 15-60 2-33 (443)
274 3g3e_A D-amino-acid oxidase; F 96.0 0.0066 2.2E-07 53.1 4.8 38 15-60 1-38 (351)
275 1s3e_A Amine oxidase [flavin-c 95.9 0.0056 1.9E-07 56.8 4.5 37 82-118 226-267 (520)
276 3i6d_A Protoporphyrinogen oxid 95.7 0.0077 2.6E-07 54.6 4.3 38 15-60 6-43 (470)
277 2ivd_A PPO, PPOX, protoporphyr 95.7 0.0077 2.6E-07 55.0 4.1 33 14-60 16-48 (478)
278 2yg5_A Putrescine oxidase; oxi 95.6 0.011 3.6E-07 53.7 4.9 32 15-60 6-37 (453)
279 2bi7_A UDP-galactopyranose mut 95.6 0.012 4.1E-07 52.5 5.1 32 15-60 4-35 (384)
280 1v0j_A UDP-galactopyranose mut 95.6 0.0095 3.2E-07 53.4 4.4 33 14-60 7-40 (399)
281 1sez_A Protoporphyrinogen oxid 95.6 0.01 3.5E-07 54.6 4.7 33 14-60 13-45 (504)
282 2bcg_G Secretory pathway GDP d 95.6 0.0094 3.2E-07 54.4 4.4 34 14-61 11-44 (453)
283 2vvm_A Monoamine oxidase N; FA 95.4 0.01 3.4E-07 54.6 4.1 32 15-60 40-71 (495)
284 3hdq_A UDP-galactopyranose mut 95.4 0.012 4.2E-07 52.8 4.4 33 14-60 29-61 (397)
285 2z3y_A Lysine-specific histone 95.4 0.011 3.8E-07 56.7 4.2 35 12-60 105-139 (662)
286 2b9w_A Putative aminooxidase; 95.4 0.014 4.8E-07 52.3 4.7 35 13-60 5-39 (424)
287 2g1u_A Hypothetical protein TM 95.3 0.023 8E-07 43.6 5.2 37 10-60 15-51 (155)
288 1i8t_A UDP-galactopyranose mut 95.1 0.014 4.7E-07 51.8 3.8 32 15-60 2-33 (367)
289 2xag_A Lysine-specific histone 95.1 0.017 5.9E-07 56.9 4.8 35 12-60 276-310 (852)
290 3lov_A Protoporphyrinogen oxid 95.1 0.017 5.9E-07 52.6 4.6 34 15-60 5-38 (475)
291 3pl8_A Pyranose 2-oxidase; sub 94.9 0.025 8.5E-07 53.9 5.0 34 15-62 47-80 (623)
292 1rsg_A FMS1 protein; FAD bindi 94.8 0.019 6.5E-07 53.1 4.0 34 84-117 216-255 (516)
293 4dgk_A Phytoene dehydrogenase; 94.8 0.048 1.6E-06 49.9 6.6 24 14-37 1-24 (501)
294 4hv4_A UDP-N-acetylmuramate--L 94.7 0.051 1.7E-06 50.2 6.6 73 12-120 20-94 (494)
295 3i83_A 2-dehydropantoate 2-red 94.5 0.13 4.5E-06 44.4 8.5 77 15-120 3-84 (320)
296 1lss_A TRK system potassium up 94.5 0.049 1.7E-06 40.4 5.0 32 15-60 5-36 (140)
297 1id1_A Putative potassium chan 94.5 0.042 1.4E-06 42.0 4.7 81 14-119 3-83 (153)
298 3llv_A Exopolyphosphatase-rela 94.4 0.043 1.5E-06 41.2 4.5 76 13-117 5-80 (141)
299 1b37_A Protein (polyamine oxid 94.2 0.037 1.3E-06 50.4 4.3 36 82-117 228-268 (472)
300 4dsg_A UDP-galactopyranose mut 94.1 0.042 1.5E-06 50.5 4.6 34 14-60 9-42 (484)
301 3fwz_A Inner membrane protein 94.0 0.061 2.1E-06 40.4 4.6 77 14-119 7-83 (140)
302 1d5t_A Guanine nucleotide diss 94.0 0.044 1.5E-06 49.6 4.4 33 14-60 6-38 (433)
303 2bs2_A Quinol-fumarate reducta 93.8 0.039 1.3E-06 52.9 3.9 32 15-60 6-37 (660)
304 3p1w_A Rabgdi protein; GDI RAB 93.7 0.05 1.7E-06 49.9 4.2 33 15-61 21-53 (475)
305 3kkj_A Amine oxidase, flavin-c 93.7 0.073 2.5E-06 43.2 4.9 36 146-191 293-328 (336)
306 3ego_A Probable 2-dehydropanto 93.5 0.16 5.6E-06 43.6 7.0 75 15-117 3-77 (307)
307 3t37_A Probable dehydrogenase; 93.5 0.043 1.5E-06 50.7 3.5 33 15-60 18-50 (526)
308 3gyx_A Adenylylsulfate reducta 93.5 0.057 1.9E-06 51.7 4.4 32 15-60 23-60 (662)
309 1jnr_A Adenylylsulfate reducta 93.4 0.028 9.5E-07 53.7 2.1 33 14-60 22-58 (643)
310 1kdg_A CDH, cellobiose dehydro 93.3 0.06 2E-06 50.2 4.2 33 14-60 7-39 (546)
311 3hn2_A 2-dehydropantoate 2-red 93.3 0.12 4.1E-06 44.5 5.7 77 15-120 3-82 (312)
312 3hn7_A UDP-N-acetylmuramate-L- 93.3 0.29 1E-05 45.4 8.7 74 13-120 18-93 (524)
313 1ju2_A HydroxynitrIle lyase; f 93.2 0.048 1.6E-06 50.8 3.3 31 15-60 27-57 (536)
314 1kyq_A Met8P, siroheme biosynt 93.2 0.068 2.3E-06 45.4 3.9 34 13-60 12-45 (274)
315 2hmt_A YUAA protein; RCK, KTN, 93.2 0.08 2.7E-06 39.4 3.9 33 14-60 6-38 (144)
316 1jw9_B Molybdopterin biosynthe 93.1 0.092 3.1E-06 43.8 4.6 39 10-61 27-65 (249)
317 1lld_A L-lactate dehydrogenase 93.0 0.1 3.4E-06 45.0 4.9 38 9-60 2-41 (319)
318 3h8v_A Ubiquitin-like modifier 92.9 0.098 3.3E-06 44.8 4.6 40 9-61 31-70 (292)
319 3c85_A Putative glutathione-re 92.8 0.11 3.7E-06 40.8 4.4 75 14-117 39-115 (183)
320 2x5o_A UDP-N-acetylmuramoylala 92.7 0.059 2E-06 48.9 3.1 35 13-61 4-38 (439)
321 1tt5_B Ubiquitin-activating en 92.7 0.14 4.9E-06 46.3 5.5 45 3-60 28-73 (434)
322 3hwr_A 2-dehydropantoate 2-red 92.4 0.24 8E-06 42.8 6.4 80 13-119 18-98 (318)
323 3rui_A Ubiquitin-like modifier 92.4 0.18 6.2E-06 44.0 5.6 45 2-60 23-67 (340)
324 3ghy_A Ketopantoate reductase 92.1 0.32 1.1E-05 42.2 7.0 76 14-117 3-80 (335)
325 2vvm_A Monoamine oxidase N; FA 92.0 0.35 1.2E-05 44.1 7.4 50 69-118 256-311 (495)
326 3ayj_A Pro-enzyme of L-phenyla 92.0 0.13 4.4E-06 49.6 4.6 42 14-61 56-97 (721)
327 3ic5_A Putative saccharopine d 92.0 0.17 5.8E-06 36.1 4.3 34 14-60 5-38 (118)
328 3l4b_C TRKA K+ channel protien 91.8 0.13 4.5E-06 41.7 3.9 77 15-119 1-77 (218)
329 3ka7_A Oxidoreductase; structu 91.6 0.36 1.2E-05 42.9 6.9 23 15-37 1-23 (425)
330 3nlc_A Uncharacterized protein 91.5 0.15 5.1E-06 47.7 4.3 48 135-191 496-543 (549)
331 3q9t_A Choline dehydrogenase a 91.3 0.12 4.1E-06 48.7 3.4 33 15-60 7-39 (577)
332 1n4w_A CHOD, cholesterol oxida 91.2 0.17 5.9E-06 46.6 4.4 32 15-60 6-37 (504)
333 3h5n_A MCCB protein; ubiquitin 91.2 0.26 9E-06 43.3 5.4 40 9-61 113-152 (353)
334 4g65_A TRK system potassium up 91.1 0.25 8.5E-06 45.1 5.3 33 14-60 3-35 (461)
335 3p1w_A Rabgdi protein; GDI RAB 91.0 0.37 1.3E-05 44.2 6.4 51 68-118 256-313 (475)
336 3o4f_A Spermidine synthase; am 91.0 0.081 2.8E-06 45.3 1.8 47 12-79 82-128 (294)
337 1coy_A Cholesterol oxidase; ox 91.0 0.18 6E-06 46.6 4.2 32 15-60 12-43 (507)
338 4ffl_A PYLC; amino acid, biosy 90.9 0.36 1.2E-05 42.3 6.0 33 14-60 1-33 (363)
339 3qvp_A Glucose oxidase; oxidor 90.9 0.14 4.7E-06 48.3 3.4 35 14-61 19-53 (583)
340 4gsl_A Ubiquitin-like modifier 90.7 0.31 1.1E-05 45.8 5.6 46 2-61 315-360 (615)
341 1zud_1 Adenylyltransferase THI 90.7 0.27 9.1E-06 41.0 4.7 38 10-60 24-61 (251)
342 3e8x_A Putative NAD-dependent 90.6 0.31 1.1E-05 39.6 5.0 78 10-119 17-96 (236)
343 3vtf_A UDP-glucose 6-dehydroge 90.4 0.41 1.4E-05 43.4 5.9 61 13-87 20-89 (444)
344 1y8q_A Ubiquitin-like 1 activa 90.3 0.22 7.5E-06 43.7 4.0 64 9-85 31-108 (346)
345 4gde_A UDP-galactopyranose mut 90.3 0.27 9.3E-06 44.8 4.8 22 15-36 11-32 (513)
346 3ado_A Lambda-crystallin; L-gu 90.3 0.14 4.8E-06 44.4 2.7 33 14-60 6-38 (319)
347 1gpe_A Protein (glucose oxidas 90.2 0.22 7.4E-06 47.0 4.2 33 14-60 24-57 (587)
348 2nvu_B Maltose binding protein 90.2 0.28 9.5E-06 48.0 5.0 46 3-61 399-445 (805)
349 3fim_B ARYL-alcohol oxidase; A 90.1 0.13 4.5E-06 48.3 2.6 32 16-60 4-35 (566)
350 1kf6_A Fumarate reductase flav 89.8 0.39 1.3E-05 45.3 5.6 57 133-191 359-416 (602)
351 1pjq_A CYSG, siroheme synthase 89.6 0.38 1.3E-05 43.8 5.2 73 13-118 11-83 (457)
352 2jbv_A Choline oxidase; alcoho 89.6 0.2 7E-06 46.7 3.4 32 15-60 14-46 (546)
353 2gqf_A Hypothetical protein HI 89.4 0.36 1.2E-05 43.1 4.8 47 137-187 352-399 (401)
354 4e12_A Diketoreductase; oxidor 89.4 0.38 1.3E-05 40.7 4.8 33 14-60 4-36 (283)
355 4id9_A Short-chain dehydrogena 89.0 0.35 1.2E-05 41.7 4.3 40 7-60 12-52 (347)
356 3vh1_A Ubiquitin-like modifier 89.0 0.41 1.4E-05 44.9 4.9 43 4-60 318-360 (598)
357 3doj_A AT3G25530, dehydrogenas 88.9 0.43 1.5E-05 41.0 4.7 37 10-60 17-53 (310)
358 1y8q_B Anthracycline-, ubiquit 88.7 0.3 1E-05 46.3 3.9 41 8-61 11-51 (640)
359 3oj0_A Glutr, glutamyl-tRNA re 88.5 0.23 7.8E-06 37.3 2.4 35 12-60 19-53 (144)
360 1f0y_A HCDH, L-3-hydroxyacyl-C 88.5 0.49 1.7E-05 40.3 4.8 33 14-60 15-47 (302)
361 3g79_A NDP-N-acetyl-D-galactos 88.0 0.59 2E-05 42.8 5.3 37 10-60 14-52 (478)
362 2ew2_A 2-dehydropantoate 2-red 87.6 0.6 2.1E-05 39.6 4.8 32 15-60 4-35 (316)
363 3dtt_A NADP oxidoreductase; st 87.5 0.71 2.4E-05 38.1 5.1 36 11-60 16-51 (245)
364 2raf_A Putative dinucleotide-b 87.4 0.67 2.3E-05 37.2 4.8 35 12-60 17-51 (209)
365 1pzg_A LDH, lactate dehydrogen 87.4 0.66 2.3E-05 40.3 5.0 33 14-60 9-42 (331)
366 1ks9_A KPA reductase;, 2-dehyd 87.4 0.63 2.1E-05 39.0 4.8 31 16-60 2-32 (291)
367 3p2y_A Alanine dehydrogenase/p 87.1 0.69 2.4E-05 41.0 5.0 34 13-60 183-216 (381)
368 3cmm_A Ubiquitin-activating en 87.1 0.45 1.5E-05 47.7 4.2 45 9-61 420-464 (1015)
369 4dll_A 2-hydroxy-3-oxopropiona 87.1 0.69 2.4E-05 39.8 4.9 36 11-60 28-63 (320)
370 3k6j_A Protein F01G10.3, confi 87.0 0.5 1.7E-05 43.1 4.1 35 12-60 52-86 (460)
371 3gpi_A NAD-dependent epimerase 87.0 0.65 2.2E-05 38.8 4.6 33 14-60 3-35 (286)
372 2vns_A Metalloreductase steap3 86.9 0.66 2.2E-05 37.5 4.4 34 13-60 27-60 (215)
373 3ius_A Uncharacterized conserv 86.7 0.7 2.4E-05 38.6 4.7 70 15-119 6-75 (286)
374 1tt5_A APPBP1, amyloid protein 86.5 0.56 1.9E-05 43.6 4.3 61 9-82 27-99 (531)
375 4aj2_A L-lactate dehydrogenase 86.5 0.58 2E-05 40.7 4.1 43 6-60 11-53 (331)
376 4dio_A NAD(P) transhydrogenase 86.5 0.78 2.7E-05 41.0 5.0 34 13-60 189-222 (405)
377 3l9w_A Glutathione-regulated p 86.4 0.65 2.2E-05 41.7 4.5 33 14-60 4-36 (413)
378 2v6b_A L-LDH, L-lactate dehydr 86.2 0.78 2.7E-05 39.3 4.8 32 15-60 1-34 (304)
379 2ewd_A Lactate dehydrogenase,; 86.2 0.85 2.9E-05 39.2 5.0 33 14-60 4-37 (317)
380 2eez_A Alanine dehydrogenase; 86.1 0.89 3E-05 40.0 5.2 34 13-60 165-198 (369)
381 2dpo_A L-gulonate 3-dehydrogen 86.1 0.69 2.4E-05 40.0 4.4 33 14-60 6-38 (319)
382 3h2s_A Putative NADH-flavin re 86.1 0.94 3.2E-05 36.2 5.0 71 16-118 2-73 (224)
383 3ew7_A LMO0794 protein; Q8Y8U8 86.0 0.96 3.3E-05 35.9 5.0 72 15-119 1-73 (221)
384 1hdo_A Biliverdin IX beta redu 85.9 0.99 3.4E-05 35.3 5.0 32 15-60 4-36 (206)
385 1bg6_A N-(1-D-carboxylethyl)-L 85.9 0.82 2.8E-05 39.7 4.8 32 15-60 5-36 (359)
386 1zej_A HBD-9, 3-hydroxyacyl-CO 85.7 0.88 3E-05 38.8 4.8 34 12-60 10-43 (293)
387 3ojo_A CAP5O; rossmann fold, c 85.7 2.1 7E-05 38.7 7.4 60 13-86 10-78 (431)
388 2y0c_A BCEC, UDP-glucose dehyd 85.6 0.85 2.9E-05 41.8 4.9 34 13-60 7-40 (478)
389 2a9f_A Putative malic enzyme ( 85.5 1 3.5E-05 40.1 5.2 36 13-61 187-222 (398)
390 4b4o_A Epimerase family protei 85.5 0.95 3.3E-05 38.1 4.9 32 15-60 1-33 (298)
391 1vg0_A RAB proteins geranylger 85.3 0.63 2.1E-05 44.3 4.0 53 15-81 9-62 (650)
392 3qsg_A NAD-binding phosphogluc 85.3 2.2 7.6E-05 36.4 7.2 34 13-60 23-57 (312)
393 2h78_A Hibadh, 3-hydroxyisobut 85.2 0.94 3.2E-05 38.4 4.8 34 13-60 2-35 (302)
394 3g17_A Similar to 2-dehydropan 85.1 0.58 2E-05 39.8 3.4 32 15-60 3-34 (294)
395 3cp8_A TRNA uridine 5-carboxym 85.1 1.2 4.1E-05 42.3 5.8 43 139-191 370-412 (641)
396 3gg2_A Sugar dehydrogenase, UD 85.1 0.9 3.1E-05 41.2 4.8 32 15-60 3-34 (450)
397 3ldh_A Lactate dehydrogenase; 85.1 0.8 2.7E-05 39.8 4.3 37 12-60 19-55 (330)
398 3q2o_A Phosphoribosylaminoimid 85.1 1.4 4.8E-05 38.8 6.0 34 13-60 13-46 (389)
399 1x13_A NAD(P) transhydrogenase 85.0 1 3.4E-05 40.3 5.0 34 13-60 171-204 (401)
400 2gas_A Isoflavone reductase; N 85.0 2.9 0.0001 35.0 7.8 83 14-118 2-87 (307)
401 1vl6_A Malate oxidoreductase; 85.0 1.1 3.8E-05 39.7 5.1 35 13-60 191-225 (388)
402 2rir_A Dipicolinate synthase, 85.0 1.1 3.9E-05 38.1 5.1 34 13-60 156-189 (300)
403 4a7p_A UDP-glucose dehydrogena 84.8 2.5 8.5E-05 38.3 7.6 60 14-87 8-76 (446)
404 2bs2_A Quinol-fumarate reducta 84.8 1.2 4.1E-05 42.6 5.7 51 68-118 158-219 (660)
405 2vhw_A Alanine dehydrogenase; 84.7 1.1 3.9E-05 39.5 5.2 35 12-60 166-200 (377)
406 1nyt_A Shikimate 5-dehydrogena 84.6 1.1 3.9E-05 37.5 4.9 34 13-60 118-151 (271)
407 4g65_A TRK system potassium up 84.6 0.91 3.1E-05 41.4 4.6 80 12-119 233-312 (461)
408 3d4o_A Dipicolinate synthase s 84.5 1.2 4.1E-05 37.8 5.1 34 13-60 154-187 (293)
409 1mv8_A GMD, GDP-mannose 6-dehy 84.5 0.96 3.3E-05 40.8 4.7 31 16-60 2-32 (436)
410 3gyx_A Adenylylsulfate reducta 84.4 1 3.6E-05 43.0 5.1 44 140-191 446-489 (662)
411 2hjr_A Malate dehydrogenase; m 84.4 1.1 3.9E-05 38.7 5.0 33 14-60 14-47 (328)
412 2bcg_G Secretory pathway GDP d 84.3 1.1 3.7E-05 40.5 5.0 51 69-120 243-301 (453)
413 1jay_A Coenzyme F420H2:NADP+ o 84.3 1.2 4E-05 35.5 4.7 31 16-60 2-33 (212)
414 1pjc_A Protein (L-alanine dehy 84.1 1.3 4.3E-05 38.9 5.2 34 13-60 166-199 (361)
415 1y6j_A L-lactate dehydrogenase 84.1 1.1 3.9E-05 38.6 4.8 36 13-60 6-41 (318)
416 2zxi_A TRNA uridine 5-carboxym 84.1 1.3 4.6E-05 41.9 5.6 44 138-191 380-423 (637)
417 2aef_A Calcium-gated potassium 84.0 0.48 1.6E-05 38.6 2.3 74 14-118 9-82 (234)
418 3nks_A Protoporphyrinogen oxid 83.9 2.1 7.2E-05 38.5 6.8 49 69-117 235-288 (477)
419 1l7d_A Nicotinamide nucleotide 83.8 1.2 4.2E-05 39.4 5.0 34 13-60 171-204 (384)
420 1zcj_A Peroxisomal bifunctiona 83.7 1.1 3.8E-05 40.8 4.8 35 12-60 35-69 (463)
421 1a5z_A L-lactate dehydrogenase 83.5 1.2 4.2E-05 38.3 4.8 32 15-60 1-34 (319)
422 3pef_A 6-phosphogluconate dehy 83.5 1.3 4.3E-05 37.4 4.8 32 15-60 2-33 (287)
423 1chu_A Protein (L-aspartate ox 83.3 1.4 4.9E-05 40.8 5.5 55 134-190 355-410 (540)
424 3pqe_A L-LDH, L-lactate dehydr 83.1 1.4 4.9E-05 38.1 5.1 36 13-60 4-39 (326)
425 1txg_A Glycerol-3-phosphate de 83.1 1.1 3.9E-05 38.3 4.4 30 16-59 2-31 (335)
426 1s3e_A Amine oxidase [flavin-c 83.0 1.4 4.8E-05 40.4 5.3 24 14-37 4-27 (520)
427 3fpf_A Mtnas, putative unchara 82.8 1.5 5.1E-05 37.5 4.9 96 12-139 121-221 (298)
428 3dhn_A NAD-dependent epimerase 82.8 1.2 4.1E-05 35.7 4.2 33 14-60 4-37 (227)
429 2i6t_A Ubiquitin-conjugating e 82.7 1.5 5E-05 37.6 4.9 36 13-60 13-48 (303)
430 3pid_A UDP-glucose 6-dehydroge 82.7 1.3 4.5E-05 40.0 4.8 33 13-60 35-67 (432)
431 1t2d_A LDH-P, L-lactate dehydr 82.7 1.5 5.1E-05 37.9 5.0 33 14-60 4-37 (322)
432 1guz_A Malate dehydrogenase; o 82.6 1.3 4.3E-05 38.0 4.5 34 15-60 1-34 (310)
433 3ond_A Adenosylhomocysteinase; 82.6 1.4 4.9E-05 40.3 5.0 34 13-60 264-297 (488)
434 3g0o_A 3-hydroxyisobutyrate de 82.6 1.5 5.1E-05 37.3 4.9 33 14-60 7-39 (303)
435 1z82_A Glycerol-3-phosphate de 82.5 1.4 4.9E-05 37.9 4.9 33 14-60 14-46 (335)
436 2egg_A AROE, shikimate 5-dehyd 82.3 1.5 5E-05 37.5 4.7 34 13-60 140-174 (297)
437 3ces_A MNMG, tRNA uridine 5-ca 82.3 1.9 6.5E-05 41.0 5.9 45 137-191 374-418 (651)
438 1d5t_A Guanine nucleotide diss 82.2 0.79 2.7E-05 41.2 3.1 53 68-120 234-291 (433)
439 3orq_A N5-carboxyaminoimidazol 82.2 1.6 5.6E-05 38.3 5.2 34 13-60 11-44 (377)
440 3vku_A L-LDH, L-lactate dehydr 82.1 1.7 5.7E-05 37.7 5.0 37 12-60 7-43 (326)
441 3k96_A Glycerol-3-phosphate de 82.0 1.3 4.3E-05 38.9 4.3 33 14-60 29-61 (356)
442 3tl2_A Malate dehydrogenase; c 81.9 1.5 5.1E-05 37.8 4.7 33 14-60 8-41 (315)
443 4f6c_A AUSA reductase domain p 81.8 1.1 3.9E-05 39.9 4.0 82 14-119 69-162 (427)
444 3pdu_A 3-hydroxyisobutyrate de 81.8 1.3 4.5E-05 37.3 4.2 32 15-60 2-33 (287)
445 3vps_A TUNA, NAD-dependent epi 81.6 1.4 4.8E-05 37.1 4.4 33 14-60 7-40 (321)
446 3phh_A Shikimate dehydrogenase 81.6 1.8 6E-05 36.5 4.9 33 14-60 118-150 (269)
447 1p77_A Shikimate 5-dehydrogena 81.5 1.3 4.4E-05 37.2 4.1 34 13-60 118-151 (272)
448 3cky_A 2-hydroxymethyl glutara 81.5 1.6 5.5E-05 36.8 4.7 33 14-60 4-36 (301)
449 3ax6_A Phosphoribosylaminoimid 81.5 1.7 5.9E-05 38.1 5.0 32 15-60 2-33 (380)
450 2f1k_A Prephenate dehydrogenas 81.5 1.7 5.8E-05 36.3 4.8 31 16-60 2-32 (279)
451 3o26_A Salutaridine reductase; 81.5 1.4 4.7E-05 37.1 4.3 40 7-60 5-45 (311)
452 3gvp_A Adenosylhomocysteinase 81.4 1.8 6E-05 39.0 5.0 34 13-60 219-252 (435)
453 2hk9_A Shikimate dehydrogenase 81.2 1.8 6.1E-05 36.3 4.9 34 13-60 128-161 (275)
454 2g5c_A Prephenate dehydrogenas 81.1 1.8 6E-05 36.2 4.8 34 15-60 2-35 (281)
455 1dlj_A UDP-glucose dehydrogena 80.8 1.3 4.5E-05 39.5 4.0 30 16-60 2-31 (402)
456 3tnl_A Shikimate dehydrogenase 80.8 2.1 7E-05 36.9 5.1 34 13-60 153-187 (315)
457 3jyo_A Quinate/shikimate dehyd 80.6 2 7E-05 36.3 5.0 34 13-60 126-160 (283)
458 2z1m_A GDP-D-mannose dehydrata 80.5 1.9 6.5E-05 36.8 4.9 33 14-60 3-36 (345)
459 1y1p_A ARII, aldehyde reductas 80.5 2.1 7E-05 36.5 5.1 34 13-60 10-44 (342)
460 4e4t_A Phosphoribosylaminoimid 80.4 1.8 6.3E-05 38.7 4.9 34 13-60 34-67 (419)
461 2q3e_A UDP-glucose 6-dehydroge 80.4 1.8 6.2E-05 39.4 4.9 34 15-60 6-39 (467)
462 3cmm_A Ubiquitin-activating en 80.4 1.3 4.4E-05 44.4 4.1 62 8-82 21-94 (1015)
463 3fbt_A Chorismate mutase and s 80.4 2.2 7.5E-05 36.1 5.1 34 13-60 121-155 (282)
464 1vpd_A Tartronate semialdehyde 80.3 1.9 6.4E-05 36.4 4.7 32 15-60 6-37 (299)
465 3i6d_A Protoporphyrinogen oxid 80.2 2.1 7.1E-05 38.3 5.2 35 83-117 248-287 (470)
466 3ruf_A WBGU; rossmann fold, UD 80.1 2.2 7.4E-05 36.7 5.2 34 13-60 24-58 (351)
467 3gvi_A Malate dehydrogenase; N 80.1 2.1 7.1E-05 37.0 5.0 35 12-60 5-40 (324)
468 1ur5_A Malate dehydrogenase; o 80.1 1.9 6.6E-05 36.9 4.8 33 15-60 3-35 (309)
469 3ce6_A Adenosylhomocysteinase; 80.1 2 6.7E-05 39.5 5.0 35 12-60 272-306 (494)
470 2dkn_A 3-alpha-hydroxysteroid 80.0 2.2 7.4E-05 34.6 4.9 32 15-60 2-34 (255)
471 4gx0_A TRKA domain protein; me 80.0 1.6 5.3E-05 40.7 4.4 32 15-60 349-380 (565)
472 2x4g_A Nucleoside-diphosphate- 79.9 2.2 7.6E-05 36.4 5.1 32 15-60 14-46 (342)
473 1leh_A Leucine dehydrogenase; 79.8 2.1 7.3E-05 37.6 5.0 33 13-59 172-204 (364)
474 1b37_A Protein (polyamine oxid 79.8 1.9 6.3E-05 39.0 4.8 23 15-37 5-27 (472)
475 3h9u_A Adenosylhomocysteinase; 79.7 2.1 7.3E-05 38.5 5.0 34 13-60 210-243 (436)
476 3mog_A Probable 3-hydroxybutyr 79.6 1.7 5.9E-05 39.8 4.5 33 14-60 5-37 (483)
477 3n58_A Adenosylhomocysteinase; 79.5 2.2 7.4E-05 38.7 4.9 34 13-60 246-279 (464)
478 4huj_A Uncharacterized protein 79.2 1.3 4.4E-05 35.8 3.2 33 14-60 23-56 (220)
479 1evy_A Glycerol-3-phosphate de 79.2 1.4 4.8E-05 38.5 3.7 31 16-60 17-47 (366)
480 2dbq_A Glyoxylate reductase; D 79.1 2.3 7.8E-05 36.9 4.9 34 13-60 149-182 (334)
481 1lu9_A Methylene tetrahydromet 79.1 2.5 8.6E-05 35.6 5.1 34 13-60 118-152 (287)
482 2zqz_A L-LDH, L-lactate dehydr 79.1 2 6.7E-05 37.2 4.5 37 11-59 6-42 (326)
483 3ko8_A NAD-dependent epimerase 79.1 2.2 7.5E-05 35.9 4.8 32 15-60 1-33 (312)
484 2pzm_A Putative nucleotide sug 79.0 1.5 5E-05 37.6 3.7 35 12-60 18-53 (330)
485 1ldn_A L-lactate dehydrogenase 79.0 2.4 8.2E-05 36.4 5.0 36 13-60 5-40 (316)
486 3ggo_A Prephenate dehydrogenas 79.0 2.3 7.7E-05 36.5 4.8 32 15-60 34-67 (314)
487 2gk4_A Conserved hypothetical 79.0 9 0.00031 31.3 8.2 34 13-60 2-52 (232)
488 3d0o_A L-LDH 1, L-lactate dehy 78.9 2.3 7.9E-05 36.6 4.9 36 13-60 5-40 (317)
489 1o5i_A 3-oxoacyl-(acyl carrier 78.9 2.5 8.5E-05 34.6 4.9 37 10-60 15-52 (249)
490 1p3d_A UDP-N-acetylmuramate--a 78.8 4.1 0.00014 37.0 6.8 52 13-88 17-69 (475)
491 3o38_A Short chain dehydrogena 78.8 2.1 7E-05 35.4 4.4 35 12-60 20-56 (266)
492 2uyy_A N-PAC protein; long-cha 78.8 1.9 6.4E-05 36.8 4.3 32 15-60 31-62 (316)
493 3t4e_A Quinate/shikimate dehyd 78.7 2.6 8.9E-05 36.2 5.1 35 13-60 147-181 (312)
494 3c24_A Putative oxidoreductase 78.6 2.1 7.2E-05 35.9 4.5 32 15-60 12-44 (286)
495 1n7h_A GDP-D-mannose-4,6-dehyd 78.6 2.4 8.3E-05 36.9 5.1 32 15-60 29-61 (381)
496 3r6d_A NAD-dependent epimerase 78.5 2.5 8.6E-05 33.6 4.8 32 15-60 6-39 (221)
497 1gpj_A Glutamyl-tRNA reductase 78.5 2.2 7.5E-05 38.0 4.7 34 13-60 166-200 (404)
498 3ek2_A Enoyl-(acyl-carrier-pro 78.5 1.7 5.8E-05 35.8 3.8 37 10-60 10-49 (271)
499 4e21_A 6-phosphogluconate dehy 78.4 2.4 8.3E-05 37.1 4.9 33 14-60 22-54 (358)
500 2o3j_A UDP-glucose 6-dehydroge 78.3 2.1 7.3E-05 39.1 4.7 35 14-60 9-43 (481)
No 1
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=2.6e-52 Score=391.14 Aligned_cols=267 Identities=30% Similarity=0.616 Sum_probs=225.9
Q ss_pred CHHHHcccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEE
Q 023375 7 SEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRL 85 (283)
Q Consensus 7 ~~~~~~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v 85 (283)
+++++++.++++|||||++|+|+|.+|+++....+.+.||.+..+.+|+|+++. +++|.+++++++++.+.|+++||++
T Consensus 210 ~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~~~~~L~~~GV~v 289 (502)
T 4g6h_A 210 GDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKV 289 (502)
T ss_dssp TCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEE
T ss_pred cchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHHHHHHHHHHHhcceee
Confidence 344567788999999999999999999999887777777776667999999998 8999999999999999999999999
Q ss_pred EeC-ceEEEeCCeEEE----cCC----cEEEeeEEEEcCCCCCchhhhc----cCCCCCCCCccccCCCcccCCCCCEEE
Q 023375 86 VRG-IVKDVDSQKLIL----NDG----TEVPYGLLVWSTGVGPSTLVKS----LDLPKSPGGRIGIDEWLRVPSVQDVFA 152 (283)
Q Consensus 86 ~~~-~V~~v~~~~v~~----~~g----~~i~~d~vi~a~G~~~~~~~~~----~~l~~~~~g~i~Vd~~l~~~~~~~Vfa 152 (283)
+++ +|++++++.+.+ .|| +++++|+||||+|.+|+++..+ ++...+.+|+|.||++||++++|||||
T Consensus 290 ~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~~lq~~~~~~IfA 369 (502)
T 4g6h_A 290 HLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFA 369 (502)
T ss_dssp ETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCTTSBBTTCSSEEE
T ss_pred ecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeECCccccCCCCCEEE
Confidence 999 899999997655 354 3699999999999999965443 456667789999999999999999999
Q ss_pred eccccccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhhhCC------CCCC----CcCCCCCCCCceeeecccEEEecC
Q 023375 153 VGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGG------GRAN----SAKDMELGDPFVYRHLGSMATIGR 222 (283)
Q Consensus 153 iGD~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~~~~------g~~~----~~~~~~~~~~~~~~~~g~~~slG~ 222 (283)
+|||+.. +.|++++.|.+||+++|+||.+..+... .... ..+..++ +||.|+++|+|+|||+
T Consensus 370 iGD~a~~-------~~p~~a~~A~qqg~~~A~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~pF~y~~~G~~a~lG~ 441 (502)
T 4g6h_A 370 IGDNAFA-------GLPPTAQVAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFEENNF-KPFKYNDLGALAYLGS 441 (502)
T ss_dssp CGGGEES-------SSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHTTSSSCCHHHHHHHTTC-CCCCCCCCEEEEECST
T ss_pred EEcccCC-------CCCCchHHHHHHHHHHHHHHHHHhccchhhhhhhhccchhhhhhcCCCC-CCCEecCcceEEEEeC
Confidence 9999974 5699999999999999999987542100 0000 0011233 8999999999999999
Q ss_pred cceeEeccccccCCCeeeecHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHhccCCCCCC
Q 023375 223 YKALVDLRQNKESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFYVAVNWATTFVFGRDISR 282 (283)
Q Consensus 223 ~~av~~~~~~~~~~~~~~~G~~a~~~~~~~~~~~~~~~~~r~~~~~~w~~~~~~~~~~~~ 282 (283)
++||+++.+... .++.+.|++||++|+++|+++++++|+|+.|++||++.+||+||++|
T Consensus 442 ~~av~~~~~~~~-~~~~~~G~~a~~~w~~~yl~~l~~~r~r~~v~~~W~~~~~fgRdisr 500 (502)
T 4g6h_A 442 ERAIATIRSGKR-TFYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDFFK 500 (502)
T ss_dssp TCEEEEEEETTE-EEEEEEEHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHSCCCCCT
T ss_pred CceEEEccCCCc-cceecccHHHHHHHHHHHHHHccchhhhHHHHHHHHHHHhCCCCCcC
Confidence 999999854211 24677899999999999999999999999999999999999999987
No 2
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.97 E-value=7.3e-31 Score=241.55 Aligned_cols=221 Identities=12% Similarity=0.130 Sum_probs=174.1
Q ss_pred CccEEEEEeCCCCC----CCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCCeEEEcC----CcEEEeeEEEEcCCCCCc
Q 023375 50 DYIHVTLIEANEIL----SSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILND----GTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 50 ~~~~V~li~~~~~l----~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~~v~~~~----g~~i~~d~vi~a~G~~~~ 120 (283)
.+.+|++++..+.+ +...+...+.+++.|+++||+++++ +|++++++.+.+++ ++++++|+++|++|.+|+
T Consensus 178 ~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~~~~~~~~~~g~~~~i~~d~vi~~~G~~~~ 257 (430)
T 3hyw_A 178 YKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGP 257 (430)
T ss_dssp GGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECEEECC
T ss_pred ccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCceEEEEeCCceEEEeeCCCceEeecceEEEeccCCCc
Confidence 45789999886433 3456778888999999999999999 89999999888764 358999999999999999
Q ss_pred hhhhccCCCC--CCCCccccCCCcccCCCCCEEEeccccccCcCCCC---cCCCcchHHHHHHHHHHHHHHHHHhhhCCC
Q 023375 121 TLVKSLDLPK--SPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGK---TVLPALAQVAERQGKYLFSLLNRIGKAGGG 195 (283)
Q Consensus 121 ~~~~~~~l~~--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~~~---~~~p~~~~~A~~qg~~~a~~i~~~~~~~~g 195 (283)
+++..++..+ +.+|++.||++||++++|||||+|||+++++..+. ...|++++.|.+||+++|+||.+.++ |
T Consensus 258 ~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~---g 334 (430)
T 3hyw_A 258 EVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIR---N 334 (430)
T ss_dssp HHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hHHHhcccccccCCceEEEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhc---C
Confidence 8888776443 55678999999998799999999999998764332 23689999999999999999999887 4
Q ss_pred CCCCcCCCCCCCCceeeecccEEEecCcceeEeccccc--cCCCeeeecHHH---------HHHHHHHHHHhcCCchhHH
Q 023375 196 RANSAKDMELGDPFVYRHLGSMATIGRYKALVDLRQNK--ESKGLSLAGFLS---------WLVWRSAYLTRVVSWRNRF 264 (283)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~g~~~slG~~~av~~~~~~~--~~~~~~~~G~~a---------~~~~~~~~~~~~~~~~~r~ 264 (283)
+ +. +++.+...+.++++|.+.|++...... ....+...|.++ |++|+..+..+.+.+++|.
T Consensus 335 ~-------~~-~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~K~~~~~~~~w~~~~~~~~~~~~~~~ 406 (430)
T 3hyw_A 335 N-------PD-KYAPRLSAICIADFGEDAGFFFADPVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKV 406 (430)
T ss_dssp C-------CC-CEEECCCEEEEEECSSSEEEEEEESSSSSCSEEEEEEEHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHH
T ss_pred C-------CC-CcccCCcEEEEEEcCCCcEEEEEcccCCccccccccccHHHHHHHHHHHHHHHHHHHHhCccHhHHHHH
Confidence 3 22 444455666788999999987643211 112344456554 5667777777789999999
Q ss_pred HHHHHHHHHhccCCCCC
Q 023375 265 YVAVNWATTFVFGRDIS 281 (283)
Q Consensus 265 ~~~~~w~~~~~~~~~~~ 281 (283)
.++++|+....+.|++.
T Consensus 407 ~~~~~w~~~~~~~~~~~ 423 (430)
T 3hyw_A 407 LEIFLKVHPIELCKDCE 423 (430)
T ss_dssp HHHHHCCCSEEECSCCC
T ss_pred HHHHhcccccccCcccc
Confidence 99999999999988874
No 3
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.96 E-value=6.8e-28 Score=222.16 Aligned_cols=162 Identities=18% Similarity=0.287 Sum_probs=148.8
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-c
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-I 89 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~ 89 (283)
.+.++++|||||++|+|+|..+++++ .+|+++++. ++++.+++++.+.+.+.|+++||+++++ +
T Consensus 145 ~~~~~vvViGgG~ig~E~A~~l~~~g--------------~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~~~~ 210 (437)
T 4eqs_A 145 NQVDKVLVVGAGYVSLEVLENLYERG--------------LHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEE 210 (437)
T ss_dssp HTCCEEEEECCSHHHHHHHHHHHHHT--------------CEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCEEESCC
T ss_pred cCCcEEEEECCccchhhhHHHHHhcC--------------CcceeeeeeccccccccchhHHHHHHHhhccceEEEeccE
Confidence 45789999999999999999999988 899999998 8999999999999999999999999999 8
Q ss_pred eEEEeCCeEEEcCCcEEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcC-CCCcC
Q 023375 90 VKDVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES-TGKTV 167 (283)
Q Consensus 90 V~~v~~~~v~~~~g~~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~-~~~~~ 167 (283)
|++++.+.+++++|+++++|.|++++|.+|+ .+++..+++.+++|+|.||+++|| +.|+|||+|||+..+.. .+...
T Consensus 211 v~~~~~~~v~~~~g~~~~~D~vl~a~G~~Pn~~~~~~~gl~~~~~G~I~vd~~~~T-s~p~IyA~GDva~~~~~~~~~~~ 289 (437)
T 4eqs_A 211 INAINGNEITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFET-NVPNIYAIGDIATSHYRHVDLPA 289 (437)
T ss_dssp EEEEETTEEEETTSCEEECSEEEECCCEEESCGGGTTSSCCCCTTSCEECCTTCBC-SSTTEEECGGGEEEEBSSSSSEE
T ss_pred EEEecCCeeeecCCeEEeeeeEEEEeceecCcHHHHhhhhhhccCCcEecCCCccC-CCCCEEEEEEccCcccccCCccc
Confidence 9999999999999999999999999999998 677888999999999999999999 99999999999987654 33344
Q ss_pred CCcchHHHHHHHHHHHHHHHH
Q 023375 168 LPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 168 ~p~~~~~A~~qg~~~a~~i~~ 188 (283)
.+++++.|.+||+++|+||..
T Consensus 290 ~~~~a~~A~~~g~~~a~ni~g 310 (437)
T 4eqs_A 290 SVPLAWGAHRAASIVAEQIAG 310 (437)
T ss_dssp CCCSHHHHHHHHHHHHHHHHS
T ss_pred cchhHHHHHHHHHHHHHHHcC
Confidence 678999999999999999864
No 4
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.95 E-value=6.2e-27 Score=215.69 Aligned_cols=229 Identities=16% Similarity=0.114 Sum_probs=170.5
Q ss_pred cCeEEEEccCcHH------HHHHHHHHHhhhhHHHhhcCCCCCccE-EEEEeCC-CC----CCCCCHHHHHHHHHHHHhC
Q 023375 14 LLHCVVVGGGPTG------VEFSGELSDFIMRDVRQRYSHVKDYIH-VTLIEAN-EI----LSSFDDRLRHYATTQLSKS 81 (283)
Q Consensus 14 ~~~vvVvGgG~~G------ve~A~~L~~~~~~~~~~~~~~~~~~~~-V~li~~~-~~----l~~~~~~~~~~~~~~l~~~ 81 (283)
..+++|||||++| +|+|.+++...++. ..+...+ |+++++. .+ ++.++ .....+.+.|+++
T Consensus 149 ~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~------g~~~~~~~Vtlv~~~~~~~~~~l~~~~-~~~~~~~~~l~~~ 221 (437)
T 3sx6_A 149 EPGPIVIGAMAGASCFGPAYEYAMIVASDLKKR------GMRDKIPSFTFITSEPYIGHLGIQGVG-DSKGILTKGLKEE 221 (437)
T ss_dssp SCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHT------TCGGGCSCEEEEESSSSTTCTTTTCCT-THHHHHHHHHHHT
T ss_pred CCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHc------CCcccCcEEEEEcCCccccccccCcch-HHHHHHHHHHHHC
Confidence 4567899997654 99998887654320 1111244 9999987 44 33444 4788899999999
Q ss_pred CCEEEeC-ceEEEeCCeEEEcC---------CcEEEeeEEEEcCCCCCchhhhc-cCCCCCCCCccccCCCcccCCCCCE
Q 023375 82 GVRLVRG-IVKDVDSQKLILND---------GTEVPYGLLVWSTGVGPSTLVKS-LDLPKSPGGRIGIDEWLRVPSVQDV 150 (283)
Q Consensus 82 gV~v~~~-~V~~v~~~~v~~~~---------g~~i~~d~vi~a~G~~~~~~~~~-~~l~~~~~g~i~Vd~~l~~~~~~~V 150 (283)
||+++++ +|++|+++.+++++ ++++++|.+++++|.++++.+.+ .++ .+++|++.||+++|++++|||
T Consensus 222 gI~~~~~~~v~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~gl-~~~~G~i~Vd~~l~t~~~~~I 300 (437)
T 3sx6_A 222 GIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGL-CNPGGFVLVDEHQRSKKYANI 300 (437)
T ss_dssp TCEEECSEEEEEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCEECCHHHHTSTTT-BCTTSCBCBCTTSBBSSCTTE
T ss_pred CCEEEcCCEEEEEECCeEEEEecccCCccccceEEEEeEEEEcCCCcCchhhhccccc-cCCCCcEEeChhccCCCCCCE
Confidence 9999999 89999999877764 67899999999999998865554 566 578899999999999899999
Q ss_pred EEeccccccCcCCCC---cCCCcchHHHHHHHHHHHHHHHHHhhhCCCCCCCcCCCCCCCCceeeecccE-EEecCccee
Q 023375 151 FAVGDCSGYLESTGK---TVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSM-ATIGRYKAL 226 (283)
Q Consensus 151 faiGD~a~~~~~~~~---~~~p~~~~~A~~qg~~~a~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~-~slG~~~av 226 (283)
||+|||+.++++.+. .+.|++++.|.+||+.+|+||.+.+. |+ ++ .+|.+.....| +++|.+.++
T Consensus 301 fa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~---g~-------~~-~~~~~~~~~~~~~~~G~~~~~ 369 (437)
T 3sx6_A 301 FAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLE---GR-------KG-EQTMGTWNAVAFADMGDRGAA 369 (437)
T ss_dssp EECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTT---TS-------CC-CCCCCSCCEEEEEECSSCEEE
T ss_pred EEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhc---CC-------CC-CCcccCcceEEEEEeCCCceE
Confidence 999999987654332 12588999999999999999999886 43 22 56555555555 458877665
Q ss_pred Eeccc-c-ccCCCeeeecHHHHHHHHHHHHHhcCCch
Q 023375 227 VDLRQ-N-KESKGLSLAGFLSWLVWRSAYLTRVVSWR 261 (283)
Q Consensus 227 ~~~~~-~-~~~~~~~~~G~~a~~~~~~~~~~~~~~~~ 261 (283)
..... . +...++.+.|.++|++|..++..++..++
T Consensus 370 ~~~~~~~p~~~~~~~~~g~~~~~~K~~~~~~f~~~~~ 406 (437)
T 3sx6_A 370 FIALPQLKPRKVDVFAYGRWVHLAKVAFEKYFIRKMK 406 (437)
T ss_dssp EEEESSSSSCSEEEEEEEHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCCcccccccccHHHHHHHHHHHHHHHHHhc
Confidence 42211 0 11245789999999999998877764443
No 5
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.95 E-value=8e-27 Score=214.52 Aligned_cols=244 Identities=14% Similarity=0.155 Sum_probs=182.6
Q ss_pred cCeEEEEccCcHH------HHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CC----CCCCCHHHHHHHHHHHHhCC
Q 023375 14 LLHCVVVGGGPTG------VEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EI----LSSFDDRLRHYATTQLSKSG 82 (283)
Q Consensus 14 ~~~vvVvGgG~~G------ve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~----l~~~~~~~~~~~~~~l~~~g 82 (283)
..+++|||+|++| +|+|..++...++ . .++...+|+++++. .+ ++.++ .....+.+.|+++|
T Consensus 142 ~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~----~--g~~~~~~V~~v~~~~~~~~~~l~~~~-~~~~~l~~~l~~~G 214 (430)
T 3h28_A 142 NPGPVVIGAIPGVSCFGPAYEFALMLHYELKK----R--GIRYKVPMTFITSEPYLGHFGVGGIG-ASKRLVEDLFAERN 214 (430)
T ss_dssp SCCCEEEEECTTCCCCHHHHHHHHHHHHHHHH----T--TCGGGCCEEEECSSSSTTCTTTTCST-THHHHHHHHHHHTT
T ss_pred cCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHH----c--CCccceEEEEecCCccccccccCcch-HHHHHHHHHHHHCC
Confidence 3567899998765 9999888765421 0 11223689999987 44 33333 47888899999999
Q ss_pred CEEEeC-ceEEEeCCeEEEcC----CcEEEeeEEEEcCCCCCchhhhcc--CCCCCCCC-ccccCCCcccCCCCCEEEec
Q 023375 83 VRLVRG-IVKDVDSQKLILND----GTEVPYGLLVWSTGVGPSTLVKSL--DLPKSPGG-RIGIDEWLRVPSVQDVFAVG 154 (283)
Q Consensus 83 V~v~~~-~V~~v~~~~v~~~~----g~~i~~d~vi~a~G~~~~~~~~~~--~l~~~~~g-~i~Vd~~l~~~~~~~VfaiG 154 (283)
|+++++ +|++|+++.+++++ ++++++|.+++++|.+|++++.++ ++ .+++| ++.||+++|++++|||||+|
T Consensus 215 V~i~~~~~v~~v~~~~v~~~~~~~~g~~i~~D~vv~a~G~~~~~~l~~~~~gl-~~~~G~~i~Vd~~l~t~~~~~Ifa~G 293 (430)
T 3h28_A 215 IDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKV-ANPANKMVIVNRCFQNPTYKNIFGVG 293 (430)
T ss_dssp CEEECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTT-BCTTTCCBCCCTTSBCSSSTTEEECS
T ss_pred CEEEeCCEEEEEeCCeEEEEecCCCceEEeeeEEEECCCCccchhHhhccccC-cCCCCCEEecCccccCCCCCCEEEEE
Confidence 999999 89999999988887 789999999999999998777764 66 57789 99999999998999999999
Q ss_pred cccccCcCCCC---cCCCcchHHHHHHHHHHHHHHHHHhhhCCCCCCCcCCCCCCCCceeeecccEE-EecCcceeEecc
Q 023375 155 DCSGYLESTGK---TVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMA-TIGRYKALVDLR 230 (283)
Q Consensus 155 D~a~~~~~~~~---~~~p~~~~~A~~qg~~~a~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~-slG~~~av~~~~ 230 (283)
||+..+.+.+. .+.|++++.|..||+++|+||.+.+. |+ + .++.+.....|+ ++|.+.++....
T Consensus 294 D~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~---g~-------~--~~~~~~~~~~~~~~~G~~~~~~~~~ 361 (430)
T 3h28_A 294 VVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIR---NN-------P--DKYAPRLSAICIADFGEDAGFFFAD 361 (430)
T ss_dssp TTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHT---TC-------C--CCEEECCCEEEEEECSSSEEEEEEE
T ss_pred eeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhc---CC-------C--CCCcCCcceEEEEEeCCCceEEEeC
Confidence 99987654332 12589999999999999999999986 43 1 335565555554 588777665221
Q ss_pred cc--ccCCCeeeecHHHHHHHHHHHHHhcCCchhHHH--HHHHHHHHhccC
Q 023375 231 QN--KESKGLSLAGFLSWLVWRSAYLTRVVSWRNRFY--VAVNWATTFVFG 277 (283)
Q Consensus 231 ~~--~~~~~~~~~G~~a~~~~~~~~~~~~~~~~~r~~--~~~~w~~~~~~~ 277 (283)
.. +....+.+.|.++|++|.+++..++..+++-.. ..-.|+...|+|
T Consensus 362 ~~~~~~~~~~~~~g~~~~~~K~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 412 (430)
T 3h28_A 362 PVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLK 412 (430)
T ss_dssp SSSSSCSEEEEEEEHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHHHHC
T ss_pred CCCCCccceeecccHHHHHHHHHHHHHHHHHhccCCcCchhHHHHHHhhcC
Confidence 10 112457889999999999999988877666543 344555555344
No 6
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.93 E-value=5.2e-25 Score=178.67 Aligned_cols=151 Identities=25% Similarity=0.350 Sum_probs=129.3
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCC---------CCC-----CHHHHHHHHHHHH
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL---------SSF-----DDRLRHYATTQLS 79 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l---------~~~-----~~~~~~~~~~~l~ 79 (283)
.+|+|||||++|+|+|..|++.+ .+|+++++. ..+ |.+ ++++.+.+.+.++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g--------------~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 67 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAG--------------LKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHAR 67 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCC--------------CcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHH
Confidence 37999999999999999999887 899999986 454 233 4788999999999
Q ss_pred hCCCEEEeCceEEEeCC----eEEEcCCcEEEeeEEEEcCCCCCchhhhccCCCCCCCCccccCCCcccCCCCCEEEecc
Q 023375 80 KSGVRLVRGIVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGD 155 (283)
Q Consensus 80 ~~gV~v~~~~V~~v~~~----~v~~~~g~~i~~d~vi~a~G~~~~~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD 155 (283)
+.||+++.++|++++.+ .+++++| ++++|.||+|+|..|+ +.+.++++.+ +|++.||+++|+ +.|+|||+||
T Consensus 68 ~~gv~v~~~~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~-~~~~~g~~~~-~g~i~vd~~~~t-~~~~i~a~GD 143 (180)
T 2ywl_A 68 RYGAEVRPGVVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPT-LPSLLGLTRR-GAYIDTDEGGRT-SYPRVYAAGV 143 (180)
T ss_dssp HTTCEEEECCCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCH-HHHHHTCCEE-TTEECCCTTCBC-SSTTEEECGG
T ss_pred HcCCEEEeCEEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCC-ccccCCCCcc-CceEEeCCCCCc-CCCCEEEeec
Confidence 99999998888888643 3666777 8999999999999985 5567788888 899999999999 8999999999
Q ss_pred ccccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 156 CSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 156 ~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
|+..+ +++++.|.+||+++|.||...++
T Consensus 144 ~~~~~--------~~~~~~A~~~g~~aa~~i~~~~~ 171 (180)
T 2ywl_A 144 ARGKV--------PGHAIISAGDGAYVAVHLVSDLR 171 (180)
T ss_dssp GGTCC--------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcc--------hhhHHHHHHhHHHHHHHHHHHhh
Confidence 99631 23889999999999999998876
No 7
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.93 E-value=6.4e-25 Score=200.58 Aligned_cols=183 Identities=23% Similarity=0.321 Sum_probs=149.8
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCC-CCHHHHHHHHHHHHhCCCEEEeC-c
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-FDDRLRHYATTQLSKSGVRLVRG-I 89 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~-~~~~~~~~~~~~l~~~gV~v~~~-~ 89 (283)
..++|+|||||++|+|+|..|++.+ .+|+++++. .+++. +++++.+.+.+.+++.||+++++ +
T Consensus 144 ~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~ 209 (408)
T 2gqw_A 144 PQSRLLIVGGGVIGLELAATARTAG--------------VHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERS 209 (408)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCC
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCC--------------CEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCE
Confidence 3689999999999999999999887 899999997 78874 89999999999999999999999 8
Q ss_pred eEEEeCCeEEEcCCcEEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcCC-CCcC
Q 023375 90 VKDVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST-GKTV 167 (283)
Q Consensus 90 V~~v~~~~v~~~~g~~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~-~~~~ 167 (283)
|++++++.|++++|+++++|.||+|+|.+|+ +++++++++.+ +| +.||+++|+ +.|+|||+|||+..+.+. |...
T Consensus 210 v~~i~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~gl~~~-~g-i~Vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~ 286 (408)
T 2gqw_A 210 VTGSVDGVVLLDDGTRIAADMVVVGIGVLANDALARAAGLACD-DG-IFVDAYGRT-TCPDVYALGDVTRQRNPLSGRFE 286 (408)
T ss_dssp EEEEETTEEEETTSCEEECSEEEECSCEEECCHHHHHHTCCBS-SS-EECCTTCBC-SSTTEEECGGGEEEEETTTTEEE
T ss_pred EEEEECCEEEECCCCEEEcCEEEECcCCCccHHHHHhCCCCCC-CC-EEECCCCcc-CCCCEEEEEEEEEecCccCCcee
Confidence 9999855888999999999999999999998 68888888876 46 999999998 899999999999865431 2222
Q ss_pred CCcchHHHHHHHHHHHHHHHHHhhhCCCCCCCcCCCCCCCCceeeecc--cEEEecC
Q 023375 168 LPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLG--SMATIGR 222 (283)
Q Consensus 168 ~p~~~~~A~~qg~~~a~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~g--~~~slG~ 222 (283)
.+++++.|.+||+++|+||..... .+++. .|+.+.... .+.++|.
T Consensus 287 ~~~~~~~A~~~g~~aa~~i~g~~~---------~~~~~-~p~~~~~~~~~~~~~~G~ 333 (408)
T 2gqw_A 287 RIETWSNAQNQGIAVARHLVDPTA---------PGYAE-LPWYWSDQGALRIQVAGL 333 (408)
T ss_dssp CCCCHHHHHHHHHHHHHHHHCTTS---------CCCCC-CCEEEEEETTEEEEEEEC
T ss_pred eccHHHHHHHHHHHHHHHhcCCCC---------CcCCC-CCeEEEEECCceEEEECC
Confidence 356789999999999999964211 01222 566665532 4566664
No 8
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.93 E-value=3.7e-25 Score=199.49 Aligned_cols=150 Identities=27% Similarity=0.506 Sum_probs=135.6
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ceE
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVK 91 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~ 91 (283)
.++++|||||++|+|+|..|++++ .+|+++++. .+++ +++++.+.+.+.|++.||+++++ +|+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~gV~i~~~~~v~ 207 (367)
T 1xhc_A 143 SGEAIIIGGGFIGLELAGNLAEAG--------------YHVKLIHRGAMFLG-LDEELSNMIKDMLEETGVKFFLNSELL 207 (367)
T ss_dssp HSEEEEEECSHHHHHHHHHHHHTT--------------CEEEEECSSSCCTT-CCHHHHHHHHHHHHHTTEEEECSCCEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhCC--------------CEEEEEeCCCeecc-CCHHHHHHHHHHHHHCCCEEEcCCEEE
Confidence 489999999999999999999887 899999997 7888 99999999999999999999999 899
Q ss_pred EEeCCeEEEcCCcEEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcCCCCcCCCc
Q 023375 92 DVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA 170 (283)
Q Consensus 92 ~v~~~~v~~~~g~~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~~~~~~p~ 170 (283)
+++.+.|++++|+ +++|.||+|+|.+|+ +++++++++.+ +| +.||+++|+ +.|+|||+|||+.... ..++
T Consensus 208 ~i~~~~v~~~~g~-i~~D~vi~a~G~~p~~~ll~~~gl~~~-~g-i~Vd~~~~t-~~~~IyA~GD~a~~~~-----~~~~ 278 (367)
T 1xhc_A 208 EANEEGVLTNSGF-IEGKVKICAIGIVPNVDLARRSGIHTG-RG-ILIDDNFRT-SAKDVYAIGDCAEYSG-----IIAG 278 (367)
T ss_dssp EECSSEEEETTEE-EECSCEEEECCEEECCHHHHHTTCCBS-SS-EECCTTSBC-SSTTEEECGGGEEBTT-----BCCC
T ss_pred EEEeeEEEECCCE-EEcCEEEECcCCCcCHHHHHhCCCCCC-CC-EEECCCccc-CCCCEEEeEeeeecCC-----CCcc
Confidence 9998889999988 999999999999999 47788888875 45 999999999 8999999999997421 2367
Q ss_pred chHHHHHHHHHHHHHHH
Q 023375 171 LAQVAERQGKYLFSLLN 187 (283)
Q Consensus 171 ~~~~A~~qg~~~a~~i~ 187 (283)
+++.|.+||+++|+||.
T Consensus 279 ~~~~A~~qg~~aa~~i~ 295 (367)
T 1xhc_A 279 TAKAAMEQARVLADILK 295 (367)
T ss_dssp SHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 89999999999999986
No 9
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.93 E-value=3.7e-25 Score=202.22 Aligned_cols=183 Identities=21% Similarity=0.302 Sum_probs=151.7
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCC-CCHHHHHHHHHHHHhCCCEEEeC-c
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-FDDRLRHYATTQLSKSGVRLVRG-I 89 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~-~~~~~~~~~~~~l~~~gV~v~~~-~ 89 (283)
..++++|||||++|+|+|..|.+.+ .+|+++++. .+++. +++++.+.+.+.+++.||+++++ +
T Consensus 142 ~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~ 207 (410)
T 3ef6_A 142 SATRLLIVGGGLIGCEVATTARKLG--------------LSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTG 207 (410)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCC
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCE
Confidence 4689999999999999999999887 899999997 67764 78999999999999999999999 8
Q ss_pred eEEEeCC----eEEEcCCcEEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcCCC
Q 023375 90 VKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTG 164 (283)
Q Consensus 90 V~~v~~~----~v~~~~g~~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~~ 164 (283)
|++++.+ .|++++|+++++|.||+|+|.+|+ ++++.++++.+ +| +.||+++++ +.|+|||+|||+..+.+.+
T Consensus 208 v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~g-i~vd~~~~t-~~~~IyA~GD~a~~~~~~g 284 (410)
T 3ef6_A 208 VVGFSGEGQLEQVMASDGRSFVADSALICVGAEPADQLARQAGLACD-RG-VIVDHCGAT-LAKGVFAVGDVASWPLRAG 284 (410)
T ss_dssp EEEEECSSSCCEEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBS-SS-EECCTTSBC-SSTTEEECGGGEEEEBTTS
T ss_pred EEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHhCCCccC-Ce-EEEccCeeE-CCCCEEEEEcceeccCCCC
Confidence 9999876 588999999999999999999999 58888899876 44 999999999 9999999999998765443
Q ss_pred CcCCCcchHHHHHHHHHHHHHHHHHhhhCCCCCCCcCCCCCCCCceeeecc--cEEEecCc
Q 023375 165 KTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLG--SMATIGRY 223 (283)
Q Consensus 165 ~~~~p~~~~~A~~qg~~~a~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~g--~~~slG~~ 223 (283)
....+++++.|..||+++|+||.... . +++. .||.+.+.. .+.++|..
T Consensus 285 ~~~~~~~~~~A~~qg~~aa~~i~g~~-----~-----~~~~-~p~~~~~~~~~~~~~~G~~ 334 (410)
T 3ef6_A 285 GRRSLETYMNAQRQAAAVAAAILGKN-----V-----SAPQ-LPVSWTEIAGHRMQMAGDI 334 (410)
T ss_dssp SEECCCCHHHHHHHHHHHHHHHTTCC-----C-----CCCB-CCEEEEEETTEEEEEESCS
T ss_pred CeeeechHHHHHHHHHHHHHHHcCCC-----C-----CCCC-CCeeEEEECCceEEEEcCC
Confidence 33457789999999999999986321 1 2222 566666543 44566643
No 10
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.93 E-value=6.4e-25 Score=204.65 Aligned_cols=152 Identities=19% Similarity=0.272 Sum_probs=136.7
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
..++++|||||++|+|+|..|++++ .+|+++++. +++|.+++++.+.+.+.|++.||+++++ +|
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~G--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v 249 (482)
T 1ojt_A 184 VPGKLLIIGGGIIGLEMGTVYSTLG--------------SRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVNTKT 249 (482)
T ss_dssp CCSEEEEESCSHHHHHHHHHHHHHT--------------CEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEEEECSCEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcC--------------CeEEEEEECCccccccCHHHHHHHHHHHHhcCCEEEECCEE
Confidence 3689999999999999999999887 899999997 8999999999999999999999999999 89
Q ss_pred EEEeCC----eEEEcC----CcEEEeeEEEEcCCCCCch-h--hhccCCCCCCCCccccCCCcccCCCCCEEEecccccc
Q 023375 91 KDVDSQ----KLILND----GTEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGY 159 (283)
Q Consensus 91 ~~v~~~----~v~~~~----g~~i~~d~vi~a~G~~~~~-~--~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~ 159 (283)
++++.+ .+++++ |+++++|.||+|+|.+|+. + +++++++++++|+|.||+++|+ +.|+|||+|||+..
T Consensus 250 ~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~ 328 (482)
T 1ojt_A 250 VAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRT-NVPHIYAIGDIVGQ 328 (482)
T ss_dssp EEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCCTTSBC-SSTTEEECGGGTCS
T ss_pred EEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeCCCccc-CCCCEEEEEcccCC
Confidence 998643 366666 7789999999999999994 4 5788999888899999999998 89999999999952
Q ss_pred CcCCCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 160 LESTGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 160 ~~~~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
|++++.|.+||+++|+||..
T Consensus 329 ---------~~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 329 ---------PMLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp ---------SCCHHHHHHHHHHHHHHHTT
T ss_pred ---------CccHHHHHHHHHHHHHHHcC
Confidence 67899999999999999863
No 11
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.93 E-value=1.7e-24 Score=198.04 Aligned_cols=182 Identities=24% Similarity=0.406 Sum_probs=151.4
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCC-CCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~-~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
.++++|||||++|+|+|..|...+ .+|+++++. .+++ .+++.+.+.+.+.+++.||+++++ +|
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v 217 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFG--------------VNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAM 217 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcC--------------CeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEE
Confidence 789999999999999999999887 899999997 7776 489999999999999999999999 89
Q ss_pred EEEeCC-----eEEEcCCcEEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcCC-
Q 023375 91 KDVDSQ-----KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST- 163 (283)
Q Consensus 91 ~~v~~~-----~v~~~~g~~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~- 163 (283)
++++.+ .|++++|+++++|.||+|+|.+|+ ++++.++++.+ +| +.||+++++ +.|+|||+|||+..+.+.
T Consensus 218 ~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~g-i~vd~~~~t-~~~~iyA~GD~a~~~~~~~ 294 (415)
T 3lxd_A 218 DCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALISAGASGG-NG-VDVDEFCRT-SLTDVYAIGDCAAHANDFA 294 (415)
T ss_dssp EEEEESSSBEEEEEESSSCEEECSEEEECSCCEESCHHHHHTTCCCS-SS-EECCTTCBC-SSTTEEECGGGEEEECGGG
T ss_pred EEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccChHHHHhCCCCcC-CC-EEECCCCCc-CCCCEEEEEeeeeecCccc
Confidence 999754 578899999999999999999999 58888888876 45 999999999 899999999999876532
Q ss_pred -CCcCCCcchHHHHHHHHHHHHHHHHHhhhCCCCCCCcCCCCCCCCceeeecc--cEEEecCc
Q 023375 164 -GKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLG--SMATIGRY 223 (283)
Q Consensus 164 -~~~~~p~~~~~A~~qg~~~a~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~g--~~~slG~~ 223 (283)
|....+.+++.|.+||+++|+||.... . ++.. .||.+.+.. .+.++|..
T Consensus 295 ~g~~~~~~~~~~A~~qg~~aa~~i~g~~-----~-----~~~~-~p~~~~~~~~~~~~~~G~~ 346 (415)
T 3lxd_A 295 DGAVIRLESVQNANDMATAAAKDICGAP-----V-----PYKA-TPWFWSNQYDLKLQTVGLS 346 (415)
T ss_dssp TTCEECCCSHHHHHHHHHHHHHHHTTCC-----C-----CCCC-CCEEEEEETTEEEEEEECC
T ss_pred CCcceeechHHHHHHHHHHHHHHhcCCC-----C-----CCCC-CCeeEeeeCCcEEEEEeCC
Confidence 444567789999999999999986321 1 2233 677666654 34566653
No 12
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.92 E-value=4.2e-24 Score=199.80 Aligned_cols=152 Identities=27% Similarity=0.440 Sum_probs=137.1
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHh---hhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDF---IMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG 88 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~---~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~ 88 (283)
..++++|||||++|+|+|..|+++ + .+|+++++. .+++.+++++.+.+.+.|++.||+++++
T Consensus 190 ~~~~vvViGgG~ig~E~A~~l~~~~~~g--------------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~ 255 (495)
T 2wpf_A 190 PPRRVLTVGGGFISVEFAGIFNAYKPPG--------------GKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTN 255 (495)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHCCTT--------------CEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEES
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhCCCC--------------CeEEEEEcCCccccccCHHHHHHHHHHHHhCCCEEEeC
Confidence 457999999999999999999987 5 899999998 8899999999999999999999999999
Q ss_pred -ceEEEeCC-----eEEEcCCcEEEeeEEEEcCCCCCch--h-hhccCCCCCCCCccccCCCcccCCCCCEEEecccccc
Q 023375 89 -IVKDVDSQ-----KLILNDGTEVPYGLLVWSTGVGPST--L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGY 159 (283)
Q Consensus 89 -~V~~v~~~-----~v~~~~g~~i~~d~vi~a~G~~~~~--~-~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~ 159 (283)
+|++++.+ .|++++|+++++|.||+|+|.+|+. + ++.++++++++|+|.||+++|+ +.|+|||+|||+.
T Consensus 256 ~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~- 333 (495)
T 2wpf_A 256 ENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRT-NVPNIYAIGDITD- 333 (495)
T ss_dssp CCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCCTTCBC-SSTTEEECGGGGC-
T ss_pred CEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEECCCCcc-CCCCEEEEeccCC-
Confidence 89998643 4777889899999999999999994 3 5778998888899999999998 8999999999994
Q ss_pred CcCCCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 160 LESTGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 160 ~~~~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
.+++++.|..||+++|+||..
T Consensus 334 --------~~~l~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 334 --------RLMLTPVAINEGAALVDTVFG 354 (495)
T ss_dssp --------SCCCHHHHHHHHHHHHHHHHS
T ss_pred --------CccCHHHHHHHHHHHHHHhcC
Confidence 267899999999999999863
No 13
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.92 E-value=2.3e-24 Score=200.59 Aligned_cols=178 Identities=22% Similarity=0.289 Sum_probs=146.7
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
..++++|||||++|+|+|..|++++ .+|+++++. .+++.+++++.+.+.+.|++.||+++++ +|
T Consensus 182 ~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v 247 (478)
T 1v59_A 182 IPKRLTIIGGGIIGLEMGSVYSRLG--------------SKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKLSTKV 247 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEE
T ss_pred cCceEEEECCCHHHHHHHHHHHHcC--------------CEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 3689999999999999999999887 899999997 8899999999999999999999999999 89
Q ss_pred EEEeC--C----eEEEc-----CCcEEEeeEEEEcCCCCCch---hhhccCCCCCCCCccccCCCcccCCCCCEEEeccc
Q 023375 91 KDVDS--Q----KLILN-----DGTEVPYGLLVWSTGVGPST---LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDC 156 (283)
Q Consensus 91 ~~v~~--~----~v~~~-----~g~~i~~d~vi~a~G~~~~~---~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~ 156 (283)
++++. + .++++ +++++++|.||+|+|.+|+. ++++++++++++|+|.||+++|+ +.|+|||+|||
T Consensus 248 ~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~ 326 (478)
T 1v59_A 248 ISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDDQFNS-KFPHIKVVGDV 326 (478)
T ss_dssp EEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCCTTSBC-SSTTEEECGGG
T ss_pred EEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeECcCCcc-CCCCEEEeecc
Confidence 99975 2 35555 35689999999999999994 57888998888899999999998 89999999999
Q ss_pred cccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhhhCCCCCCCcCCCCCCCCceeeecccEEEecCc
Q 023375 157 SGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRY 223 (283)
Q Consensus 157 a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~slG~~ 223 (283)
+.. |++++.|.+||+++|+||.... .. . ++.. .|+.......++++|..
T Consensus 327 ~~~---------~~~~~~A~~~g~~aa~~i~~~~----~~-~---~~~~-~p~~~~~~~~~a~vG~~ 375 (478)
T 1v59_A 327 TFG---------PMLAHKAEEEGIAAVEMLKTGH----GH-V---NYNN-IPSVMYSHPEVAWVGKT 375 (478)
T ss_dssp SSS---------CCCHHHHHHHHHHHHHHHHHSC----CC-C---CTTS-CCEEECSSSEEEEEECC
T ss_pred CCC---------cccHHHHHHHHHHHHHHHcCCC----CC-C---CCCC-CCEEEEcCCcEEEEECC
Confidence 952 6788999999999999997521 11 0 1121 45544444567777743
No 14
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.92 E-value=6.3e-24 Score=198.82 Aligned_cols=159 Identities=25% Similarity=0.355 Sum_probs=137.4
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ceE
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVK 91 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~ 91 (283)
.++++|||||++|+|+|..|++++ .+|+++++. .+++.+++++.+.+.+.|++.||+++++ +|+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~~~v~ 241 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLG--------------IDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTFADVV 241 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTT--------------CEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEE
T ss_pred CCeEEEECChHHHHHHHHHHHHcC--------------CeEEEEecCCccCcccchhhHHHHHHHHHhCCCEEEECCEEE
Confidence 689999999999999999999887 899999997 8899999999999999999999999999 899
Q ss_pred EEeCC-----eEEEcCCcE-EEeeEEEEcCCCCCch--h-hhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcC
Q 023375 92 DVDSQ-----KLILNDGTE-VPYGLLVWSTGVGPST--L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES 162 (283)
Q Consensus 92 ~v~~~-----~v~~~~g~~-i~~d~vi~a~G~~~~~--~-~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~ 162 (283)
+++.+ .+++++|++ +++|.||+|+|.+|+. + +++++++. ++|+|.||+++|+ +.|+|||+|||+.+++.
T Consensus 242 ~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~-~~G~i~vd~~~~t-~~~~iya~GD~~~~~~~ 319 (500)
T 1onf_A 242 EIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVET-NNNYIVVDENQRT-SVNNIYAVGDCCMVKKS 319 (500)
T ss_dssp EEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCB-SSSCEEECTTCBC-SSSSEEECSTTEEEC--
T ss_pred EEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCccc-cCCEEEECCCccc-CCCCEEEEecccccccc
Confidence 99742 467788888 9999999999999995 3 57788888 7899999999998 89999999999954211
Q ss_pred ------------------------CC-CcCCCcchHHHHHHHHHHHHHHHH
Q 023375 163 ------------------------TG-KTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 163 ------------------------~~-~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
.+ ....+++++.|.+||+++|+||..
T Consensus 320 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g 370 (500)
T 1onf_A 320 KEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFL 370 (500)
T ss_dssp ----------------------------CBCCCCHHHHHHHHHHHHHHHHS
T ss_pred ccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhC
Confidence 00 003478999999999999999864
No 15
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.9e-24 Score=201.39 Aligned_cols=152 Identities=23% Similarity=0.388 Sum_probs=137.4
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
..++++|||||++|+|+|..|++++ .+|+++++. .+++.+++++.+.+.+.|++.||+++++ +|
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v 249 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLG--------------SETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLSKI 249 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTT--------------CEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcC--------------CceEEEEeCCccccccCHHHHHHHHHHHHhCCeEEEeCCEE
Confidence 4689999999999999999999887 899999998 8899999999999999999999999999 89
Q ss_pred EEEeCC------eEEEcCC-cEEEeeEEEEcCCCCCch-h-hhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCc
Q 023375 91 KDVDSQ------KLILNDG-TEVPYGLLVWSTGVGPST-L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLE 161 (283)
Q Consensus 91 ~~v~~~------~v~~~~g-~~i~~d~vi~a~G~~~~~-~-~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~ 161 (283)
++++.+ .|++++| +++++|.||+|+|.+|+. + ++.++++++++|+|.||+++|+ +.|+|||+|||+.
T Consensus 250 ~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~--- 325 (479)
T 2hqm_A 250 VKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHLGMGSENVGIKLNSHDQIIADEYQNT-NVPNIYSLGDVVG--- 325 (479)
T ss_dssp EEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECCCSSGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTT---
T ss_pred EEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCccccChhhcCceECCCCCEeECCCCcc-CCCCEEEEEecCC---
Confidence 998642 4677888 789999999999999995 5 5778999988899999999998 8999999999974
Q ss_pred CCCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 162 STGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 162 ~~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
.|..++.|.+||+++|+||..
T Consensus 326 ------~~~~~~~A~~~g~~aa~~i~~ 346 (479)
T 2hqm_A 326 ------KVELTPVAIAAGRKLSNRLFG 346 (479)
T ss_dssp ------SSCCHHHHHHHHHHHHHHHHS
T ss_pred ------CcccHHHHHHHHHHHHHHhcC
Confidence 267899999999999999874
No 16
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.92 E-value=1.8e-24 Score=205.29 Aligned_cols=162 Identities=28% Similarity=0.449 Sum_probs=143.2
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-c
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-I 89 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~ 89 (283)
...++|+|||||++|+|+|..|++.+ .+|+++++. .+++.+++++.+.+.+.+++.||+++++ +
T Consensus 149 ~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~ 214 (565)
T 3ntd_A 149 NNVEHATVVGGGFIGLEMMESLHHLG--------------IKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLGTA 214 (565)
T ss_dssp TTCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEETCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcC--------------CcEEEEEcCCccchhcCHHHHHHHHHHHHHCCCEEEeCCe
Confidence 34679999999999999999999887 899999997 8899999999999999999999999999 8
Q ss_pred eEEEeC--------------------C---eEEEcCCcEEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccC
Q 023375 90 VKDVDS--------------------Q---KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVP 145 (283)
Q Consensus 90 V~~v~~--------------------~---~v~~~~g~~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~ 145 (283)
|++++. + .+++.+|+++++|.||+|+|.+|+ .+++.++++++++|++.||+++|+
T Consensus 215 v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~g~~~~~~g~i~vd~~~~t- 293 (565)
T 3ntd_A 215 LSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPETQLARDAGLAIGELGGIKVNAMMQT- 293 (565)
T ss_dssp EEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECCHHHHHHTCCBCTTSSBCCCTTCBC-
T ss_pred EEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccchHHHHhCCcccCCCCCEEECCCccc-
Confidence 988865 2 366788999999999999999999 577778999998999999999999
Q ss_pred CCCCEEEeccccccCcC-CCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 146 SVQDVFAVGDCSGYLES-TGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 146 ~~~~VfaiGD~a~~~~~-~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
+.|+|||+|||+..++. .+....+++++.|.+||+++|+||..
T Consensus 294 ~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 337 (565)
T 3ntd_A 294 SDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFG 337 (565)
T ss_dssp SSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcC
Confidence 89999999999976654 23334678999999999999999863
No 17
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.92 E-value=6.5e-24 Score=198.27 Aligned_cols=152 Identities=24% Similarity=0.429 Sum_probs=137.3
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHh---hhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDF---IMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG 88 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~---~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~ 88 (283)
..++++|||||++|+|+|..|+++ + .+|+++++. .++|.+++++.+.+.+.|++.||+++++
T Consensus 186 ~~~~vvViGgG~ig~E~A~~l~~~~~~g--------------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~ 251 (490)
T 1fec_A 186 APKRALCVGGGYISIEFAGIFNAYKARG--------------GQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTH 251 (490)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHSCTT--------------CEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEET
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhccCc--------------CeEEEEEcCCCcccccCHHHHHHHHHHHHhCCCEEEeC
Confidence 457999999999999999999987 5 899999998 8899999999999999999999999999
Q ss_pred -ceEEEeCC-----eEEEcCCcEEEeeEEEEcCCCCCch--h-hhccCCCCCCCCccccCCCcccCCCCCEEEecccccc
Q 023375 89 -IVKDVDSQ-----KLILNDGTEVPYGLLVWSTGVGPST--L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGY 159 (283)
Q Consensus 89 -~V~~v~~~-----~v~~~~g~~i~~d~vi~a~G~~~~~--~-~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~ 159 (283)
+|++++.+ .|++++|+++++|.||+|+|.+|+. + ++.++++++++|+|.||+++|+ +.|+|||+|||+.
T Consensus 252 ~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd~~~~t-~~~~IyA~GD~~~- 329 (490)
T 1fec_A 252 ENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYSKT-NVDNIYAIGDVTD- 329 (490)
T ss_dssp CCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECGGGGC-
T ss_pred CEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEECCCCcc-CCCCEEEEeccCC-
Confidence 89998643 4677888899999999999999995 3 6778999888899999999998 8999999999994
Q ss_pred CcCCCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 160 LESTGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 160 ~~~~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
.+++++.|.+||+++|+||..
T Consensus 330 --------~~~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 330 --------RVMLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp --------SCCCHHHHHHHHHHHHHHHHS
T ss_pred --------CccCHHHHHHHHHHHHHHhcC
Confidence 267899999999999999863
No 18
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.92 E-value=2.1e-24 Score=201.54 Aligned_cols=160 Identities=26% Similarity=0.368 Sum_probs=138.2
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCC-CCCHHHHHHHHHHHHhCCCEEEeC-
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATTQLSKSGVRLVRG- 88 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~-~~~~~~~~~~~~~l~~~gV~v~~~- 88 (283)
...++|+|||||++|+|+|..|++++ .+|+++++. .+++ .+++++.+.+.+.|++.||+++++
T Consensus 192 ~~~~~vvVIGgG~ig~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~ 257 (490)
T 2bc0_A 192 KDIKRVAVVGAGYIGVELAEAFQRKG--------------KEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGE 257 (490)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETC
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCC--------------CeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCC
Confidence 45789999999999999999999887 899999997 7888 799999999999999999999999
Q ss_pred ceEEEeCCe----EEEcCCcEEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcC-
Q 023375 89 IVKDVDSQK----LILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES- 162 (283)
Q Consensus 89 ~V~~v~~~~----v~~~~g~~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~- 162 (283)
+|++++.++ +.+ +|+++++|.||+|+|.+|+ ++++.. ++++++|+|.||+++|+ +.|+|||+|||+..+.+
T Consensus 258 ~v~~i~~~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ll~~~-l~~~~~G~I~Vd~~~~t-~~~~IyA~GD~~~~~~~~ 334 (490)
T 2bc0_A 258 TVKEVAGNGKVEKIIT-DKNEYDVDMVILAVGFRPNTTLGNGK-IDLFRNGAFLVNKRQET-SIPGVYAIGDCATIYDNA 334 (490)
T ss_dssp CEEEEECSSSCCEEEE-SSCEEECSEEEECCCEEECCGGGTTC-SCBCTTSCBCCCTTCBC-SSTTEEECGGGBCEEETT
T ss_pred EEEEEEcCCcEEEEEE-CCcEEECCEEEECCCCCcChHHHHhh-hccCCCCCEEECCCccc-CCCCEEEeeeeEEecccc
Confidence 899997652 555 7789999999999999999 566665 77778899999999999 99999999999976432
Q ss_pred CCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 163 TGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 163 ~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
.+....+++++.|.+||+++|+||..
T Consensus 335 ~g~~~~~~~~~~A~~qg~~aa~~i~g 360 (490)
T 2bc0_A 335 TRDTNYIALASNAVRTGIVAAHNACG 360 (490)
T ss_dssp TTEEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCceeecccHHHHHHHHHHHHHHhcC
Confidence 22223467899999999999999863
No 19
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.92 E-value=2.3e-24 Score=196.55 Aligned_cols=183 Identities=25% Similarity=0.421 Sum_probs=150.5
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCC-CCCHHHHHHHHHHHHhCCCEEEeC-c
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATTQLSKSGVRLVRG-I 89 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~-~~~~~~~~~~~~~l~~~gV~v~~~-~ 89 (283)
..++++|||+|++|+|+|..+...+ .+|+++++. .+++ .+++++.+.+.+.+++.||+++++ +
T Consensus 141 ~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~ 206 (404)
T 3fg2_P 141 DKKHVVVIGAGFIGLEFAATARAKG--------------LEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVR 206 (404)
T ss_dssp GCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCC
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCC--------------CEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCE
Confidence 5689999999999999999999887 899999997 6776 489999999999999999999999 8
Q ss_pred eEEEeCC-----eEEEcCCcEEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcC-
Q 023375 90 VKDVDSQ-----KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES- 162 (283)
Q Consensus 90 V~~v~~~-----~v~~~~g~~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~- 162 (283)
|++++.+ .|++++|+++++|.||+|+|.+|+ ++++.++++.+ +| +.||+++++ +.|+|||+|||+..+.+
T Consensus 207 v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~G-i~vd~~~~t-~~~~iya~GD~a~~~~~~ 283 (404)
T 3fg2_P 207 ATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAAGLPTA-AG-IIVDQQLLT-SDPHISAIGDCALFESVR 283 (404)
T ss_dssp EEEEEEETTEEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBS-SS-EEECTTSBC-SSTTEEECGGGEEEEETT
T ss_pred EEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHhCCCCCC-CC-EEECCCccc-CCCCEEEeecceeecCcc
Confidence 9998753 578899999999999999999999 48888898876 45 999999998 89999999999987653
Q ss_pred CCCcCCCcchHHHHHHHHHHHHHHHHHhhhCCCCCCCcCCCCCCCCceeeecc--cEEEecCc
Q 023375 163 TGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLG--SMATIGRY 223 (283)
Q Consensus 163 ~~~~~~p~~~~~A~~qg~~~a~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~g--~~~slG~~ 223 (283)
.|....+.+++.|..||+.+|+||.... .++.. .||.+.++. .+.++|..
T Consensus 284 ~g~~~~~~~~~~A~~qg~~aa~~i~g~~----------~~~~~-~p~~~~~~~~~~~~~~G~~ 335 (404)
T 3fg2_P 284 FGETMRVESVQNATDQARCVAARLTGDA----------KPYDG-YPWFWSDQGDDKLQIVGLT 335 (404)
T ss_dssp TTEEECCCSHHHHHHHHHHHHHHTTTCC----------CCCCC-CCEEEEEETTEEEEEEECC
T ss_pred CCceeeehHHHHHHHHHHHHHHHhCCCC----------CCCCC-CCceEeEECCcEEEEEeCC
Confidence 2323346678999999999999986321 12232 677676664 34556643
No 20
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.92 E-value=5.9e-24 Score=196.53 Aligned_cols=152 Identities=27% Similarity=0.414 Sum_probs=137.0
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
..++++|||||++|+|+|..|++++ .+|+++++. .+++.+++++.+.+.+.|++.||+++++ +|
T Consensus 166 ~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v 231 (450)
T 1ges_A 166 LPERVAVVGAGYIGVELGGVINGLG--------------AKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIP 231 (450)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSCCE
T ss_pred cCCeEEEECCCHHHHHHHHHHHhcC--------------CEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 4689999999999999999999887 899999997 7899999999999999999999999999 89
Q ss_pred EEEeCC-----eEEEcCCcEEEeeEEEEcCCCCCch--h-hhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcC
Q 023375 91 KDVDSQ-----KLILNDGTEVPYGLLVWSTGVGPST--L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES 162 (283)
Q Consensus 91 ~~v~~~-----~v~~~~g~~i~~d~vi~a~G~~~~~--~-~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~ 162 (283)
++++.+ .|++++|+++++|.||+|+|.+|+. + ++.++++++++|+|.||+++|+ +.|+|||+|||+.
T Consensus 232 ~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~---- 306 (450)
T 1ges_A 232 KAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNT-NIEGIYAVGDNTG---- 306 (450)
T ss_dssp EEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECSGGGT----
T ss_pred EEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCCcc-CCCCEEEEeccCC----
Confidence 998743 4777889899999999999999994 3 5778898888999999999998 8999999999984
Q ss_pred CCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 163 TGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 163 ~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
.|+.++.|.+||+++|+||..
T Consensus 307 -----~~~~~~~A~~~g~~aa~~i~~ 327 (450)
T 1ges_A 307 -----AVELTPVAVAAGRRLSERLFN 327 (450)
T ss_dssp -----SCCCHHHHHHHHHHHHHHHHT
T ss_pred -----CCccHHHHHHHHHHHHHHHcC
Confidence 267899999999999999864
No 21
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.92 E-value=4.7e-24 Score=198.39 Aligned_cols=152 Identities=22% Similarity=0.320 Sum_probs=134.7
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCC-CCCHHHHHHHHHHHHhCCCEEEeC-c
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATTQLSKSGVRLVRG-I 89 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~-~~~~~~~~~~~~~l~~~gV~v~~~-~ 89 (283)
..++++|||||++|+|+|..|++++ .+|+++++. .+++ .+++++.+.+.+.|++.||+++++ +
T Consensus 177 ~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~ 242 (474)
T 1zmd_A 177 VPEKMVVIGAGVIGVELGSVWQRLG--------------ADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTK 242 (474)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEE
T ss_pred cCceEEEECCCHHHHHHHHHHHHcC--------------CEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeCce
Confidence 3589999999999999999999887 899999998 8899 899999999999999999999999 8
Q ss_pred eEEEeCC--e-EEE-------cCCcEEEeeEEEEcCCCCCch-h--hhccCCCCCCCCccccCCCcccCCCCCEEEeccc
Q 023375 90 VKDVDSQ--K-LIL-------NDGTEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDC 156 (283)
Q Consensus 90 V~~v~~~--~-v~~-------~~g~~i~~d~vi~a~G~~~~~-~--~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~ 156 (283)
|++++.+ . +.+ .+++++++|.||+|+|.+|+. + +++++++++++|+|.||+++|+ +.|+|||+|||
T Consensus 243 v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~ 321 (474)
T 1zmd_A 243 VTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQT-KIPNIYAIGDV 321 (474)
T ss_dssp EEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTTCBC-SSTTEEECGGG
T ss_pred EEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcCCcc-CCCCEEEeeec
Confidence 9999743 2 443 356789999999999999994 4 5778898888899999999998 89999999999
Q ss_pred cccCcCCCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 157 SGYLESTGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 157 a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
+.. |++++.|.+||+++|+||..
T Consensus 322 ~~~---------~~~~~~A~~~g~~aa~~i~~ 344 (474)
T 1zmd_A 322 VAG---------PMLAHKAEDEGIICVEGMAG 344 (474)
T ss_dssp SSS---------CCCHHHHHHHHHHHHHHHTT
T ss_pred CCC---------CccHHHHHHHHHHHHHHhcC
Confidence 952 67899999999999999863
No 22
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.92 E-value=2e-24 Score=200.31 Aligned_cols=152 Identities=24% Similarity=0.414 Sum_probs=135.1
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
..++++|||||++|+|+|..|++++ .+|+++++. +++|.+++++.+.+.+.|++.||+++++ +|
T Consensus 170 ~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v 235 (464)
T 2a8x_A 170 LPKSIIIAGAGAIGMEFGYVLKNYG--------------VDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKV 235 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECSCEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcC--------------CeEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEEeCcEE
Confidence 4689999999999999999999887 899999997 8999999999999999999999999999 89
Q ss_pred EEEeCC----eEEEc-CC--cEEEeeEEEEcCCCCCch-h--hhccCCCCCCCCccccCCCcccCCCCCEEEeccccccC
Q 023375 91 KDVDSQ----KLILN-DG--TEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYL 160 (283)
Q Consensus 91 ~~v~~~----~v~~~-~g--~~i~~d~vi~a~G~~~~~-~--~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~ 160 (283)
++++.+ .+.++ +| +++++|.||+|+|.+|+. + +++++++++++|+|.||+++|+ +.|+|||+|||+..
T Consensus 236 ~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~- 313 (464)
T 2a8x_A 236 ESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRT-NVGHIYAIGDVNGL- 313 (464)
T ss_dssp EEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTTSBC-SSTTEEECGGGGCS-
T ss_pred EEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcCCcc-CCCCEEEeECcCCC-
Confidence 999753 24444 66 689999999999999994 4 5777898888899999999998 89999999999952
Q ss_pred cCCCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 161 ESTGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 161 ~~~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
+++++.|.+||+++|+||..
T Consensus 314 --------~~~~~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 314 --------LQLAHVAEAQGVVAAETIAG 333 (464)
T ss_dssp --------SCSHHHHHHHHHHHHHHHHT
T ss_pred --------ccCHHHHHHHHHHHHHHhcC
Confidence 67889999999999999863
No 23
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.92 E-value=2.7e-24 Score=205.06 Aligned_cols=162 Identities=27% Similarity=0.428 Sum_probs=145.9
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-c
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-I 89 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~ 89 (283)
...++++|||||++|+|+|..|++.+ .+|+++++. .+++.+++++.+.+.+.|++.||+++++ +
T Consensus 185 ~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~ 250 (588)
T 3ics_A 185 KKPRHATVIGGGFIGVEMVENLRERG--------------IEVTLVEMANQVMPPIDYEMAAYVHEHMKNHDVELVFEDG 250 (588)
T ss_dssp HCCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCC
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEecCCcccccCCHHHHHHHHHHHHHcCCEEEECCe
Confidence 45789999999999999999999887 899999997 8899999999999999999999999999 8
Q ss_pred eEEEeC--CeEEEcCCcEEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcCC-CC
Q 023375 90 VKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST-GK 165 (283)
Q Consensus 90 V~~v~~--~~v~~~~g~~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~-~~ 165 (283)
|++++. +.|++++|+++++|.||+|+|.+|+ ++++.++++++++|++.||+++|+ +.|+|||+|||+..++.. |.
T Consensus 251 v~~i~~~~~~v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~~g~~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~g~ 329 (588)
T 3ics_A 251 VDALEENGAVVRLKSGSVIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVNEKFQT-SDPHIYAIGDAIEVKDFVTET 329 (588)
T ss_dssp EEEEEGGGTEEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBCGGGCBCCCTTSBC-SSTTEEECGGGBCEEBTTTCC
T ss_pred EEEEecCCCEEEECCCCEEEcCEEEEccCCCCChHHHHhcCceEcCCCCEEECCcccc-CCCCEEEeeeeeecccccCCc
Confidence 999986 5799999999999999999999999 578888999988999999999999 899999999999765542 33
Q ss_pred cCCCcchHHHHHHHHHHHHHHHH
Q 023375 166 TVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 166 ~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
...+++++.|..||+++|+||..
T Consensus 330 ~~~~~~~~~A~~~g~~aa~~i~g 352 (588)
T 3ics_A 330 ETMIPLAWPANRQGRMLADIIHG 352 (588)
T ss_dssp EECCCCHHHHHHHHHHHHHHHTT
T ss_pred ccccccHHHHHHHHHHHHHHhcC
Confidence 33578999999999999999863
No 24
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.92 E-value=8.5e-24 Score=195.34 Aligned_cols=159 Identities=26% Similarity=0.414 Sum_probs=140.7
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCC-CCHHHHHHHHHHHHhCCCEEEeC-c
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-FDDRLRHYATTQLSKSGVRLVRG-I 89 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~-~~~~~~~~~~~~l~~~gV~v~~~-~ 89 (283)
+.++++|||||++|+|+|..|++.+ .+|+++++. ++++. +++++.+.+.+.+++. |+++++ .
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~ 211 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQG--------------KNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEI 211 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCe
Confidence 5579999999999999999999887 899999997 78887 9999999999999999 999999 8
Q ss_pred eEEEeCCe---EEEcCCcEEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcC-CC
Q 023375 90 VKDVDSQK---LILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES-TG 164 (283)
Q Consensus 90 V~~v~~~~---v~~~~g~~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~-~~ 164 (283)
|.+++.+. ..+.+++++++|.||+|+|.+|+ ++++.++++++++|++.||+++|+ +.|+|||+|||+..++. .|
T Consensus 212 v~~i~~~~~v~~v~~~g~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~g 290 (449)
T 3kd9_A 212 TMKIEGEERVEKVVTDAGEYKAELVILATGIKPNIELAKQLGVRIGETGAIWTNEKMQT-SVENVYAAGDVAETRHVITG 290 (449)
T ss_dssp EEEEECSSSCCEEEETTEEEECSEEEECSCEEECCHHHHHTTCCBCTTSSBCCCTTCBC-SSTTEEECSTTBCEEBTTTC
T ss_pred EEEEeccCcEEEEEeCCCEEECCEEEEeeCCccCHHHHHhCCccCCCCCCEEECCCCcc-CCCCEEEeeeeeeeccccCC
Confidence 99998653 34567889999999999999998 677888999999999999999999 99999999999976554 23
Q ss_pred CcCCCcchHHHHHHHHHHHHHHH
Q 023375 165 KTVLPALAQVAERQGKYLFSLLN 187 (283)
Q Consensus 165 ~~~~p~~~~~A~~qg~~~a~~i~ 187 (283)
....+++++.|.+||+++|+||.
T Consensus 291 ~~~~~~l~~~A~~~g~~aa~~i~ 313 (449)
T 3kd9_A 291 RRVWVPLAPAGNKMGYVAGSNIA 313 (449)
T ss_dssp SEECCCCHHHHHHHHHHHHHHHT
T ss_pred ceEEeccHHHHHHHHHHHHHHhc
Confidence 33357899999999999999986
No 25
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.92 E-value=2.1e-24 Score=200.62 Aligned_cols=160 Identities=29% Similarity=0.460 Sum_probs=142.5
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHh-hhhHHHhhcCCCCCccEEEEEeCC-CCCC-CCCHHHHHHHHHHHHhCCCEEEeC-
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDF-IMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATTQLSKSGVRLVRG- 88 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~-~~~~~~~~~~~~~~~~~V~li~~~-~~l~-~~~~~~~~~~~~~l~~~gV~v~~~- 88 (283)
..++++|||||++|+|+|..|++. + .+|+++++. .+++ .+++++.+.+.+.+++.||+++++
T Consensus 158 ~~~~vvViGgG~~g~e~A~~l~~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~ 223 (472)
T 3iwa_A 158 EVSKAVIVGGGFIGLEMAVSLADMWG--------------IDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGE 223 (472)
T ss_dssp SCSEEEEECCSHHHHHHHHHHHHHHC--------------CEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcC--------------CcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCC
Confidence 468999999999999999999988 6 899999997 7888 899999999999999999999999
Q ss_pred ceEEEeC-C-e--EEEcCCcEEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcCC
Q 023375 89 IVKDVDS-Q-K--LILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST 163 (283)
Q Consensus 89 ~V~~v~~-~-~--v~~~~g~~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~ 163 (283)
+|++++. + . +++++|+++++|.||+|+|.+|+ .+++.++++++++|++.||+++|+ +.|+|||+|||+..++..
T Consensus 224 ~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~~g~i~vd~~~~t-~~~~Iya~GD~~~~~~~~ 302 (472)
T 3iwa_A 224 KVVRLEGENGKVARVITDKRTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRMRT-SDPDIFAGGDCVTIPNLV 302 (472)
T ss_dssp CEEEEEESSSBEEEEEESSCEEECSEEEECSCEEECCHHHHHHTCCBCTTCCEECCTTCBC-SSTTEEECGGGEEEEBTT
T ss_pred EEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcCHHHHHhCCccCCCCCCEEECCCccc-CCCCEEEeccceeccccc
Confidence 8999975 3 2 67788999999999999999998 577778999988999999999999 899999999999876542
Q ss_pred -CCcCCCcchHHHHHHHHHHHHHHH
Q 023375 164 -GKTVLPALAQVAERQGKYLFSLLN 187 (283)
Q Consensus 164 -~~~~~p~~~~~A~~qg~~~a~~i~ 187 (283)
+....+++++.|.+||+++|+||.
T Consensus 303 ~g~~~~~~~~~~A~~~g~~aa~~i~ 327 (472)
T 3iwa_A 303 TGKPGFFPLGSMANRQGRVIGTNLA 327 (472)
T ss_dssp TSSEECCCCTTHHHHHHHHHHHHHT
T ss_pred CCceeecchHHHHHHHHHHHHHHhc
Confidence 333357899999999999999986
No 26
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.92 E-value=6.7e-24 Score=199.69 Aligned_cols=177 Identities=22% Similarity=0.315 Sum_probs=149.5
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ceEE
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKD 92 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~ 92 (283)
++++|||||++|+|+|..|++.+ .+|+++++. .+++.+++++.+.+.+.|++.||+++++ +|++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~ 280 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATG--------------RRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTR 280 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCEEESSCEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHcC--------------CeEEEEEecCcccccccHHHHHHHHHHHHhCCcEEEECCEEEE
Confidence 89999999999999999999887 899999997 8899999999999999999999999999 8999
Q ss_pred EeC--Ce------EEEcCCc-EEEeeEEEEcCCCCCch--hhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCc
Q 023375 93 VDS--QK------LILNDGT-EVPYGLLVWSTGVGPST--LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLE 161 (283)
Q Consensus 93 v~~--~~------v~~~~g~-~i~~d~vi~a~G~~~~~--~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~ 161 (283)
++. ++ |++++|+ ++++|.||+|+|.+|+. +++.++++.+++|+|.||+++|+ +.|+|||+|||+..
T Consensus 281 i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~-- 357 (523)
T 1mo9_A 281 IEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVNEYLQT-SVPNVYAVGDLIGG-- 357 (523)
T ss_dssp EEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGCS--
T ss_pred EEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHHcCCccCCCCCEEECCCCcc-CCCCEEEEeecCCC--
Confidence 864 33 5667887 89999999999999995 68888999988899999999999 89999999999952
Q ss_pred CCCCcCCCcchHHHHHHHHHHHHHHHHHhhhCCCCCCCcCCCCCCCCceeeecccEEEecCcc
Q 023375 162 STGKTVLPALAQVAERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMATIGRYK 224 (283)
Q Consensus 162 ~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~slG~~~ 224 (283)
|+.++.|..||+++|+||... ...+ .+.. .|+.......++++|...
T Consensus 358 -------~~~~~~A~~~g~~aa~~i~g~-----~~~~---~~~~-~p~~~~~~~~~a~vG~~e 404 (523)
T 1mo9_A 358 -------PMEMFKARKSGCYAARNVMGE-----KISY---TPKN-YPDFLHTHYEVSFLGMGE 404 (523)
T ss_dssp -------SCSHHHHHHHHHHHHHHHTTC-----CCCC---CCCS-CCEEEESSSEEEEEECCH
T ss_pred -------cccHHHHHHHHHHHHHHHcCC-----CCCC---CCCC-CCeEEECCCceEEEeCCH
Confidence 578899999999999998631 1111 1122 466555556888888643
No 27
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.92 E-value=4.5e-24 Score=198.22 Aligned_cols=152 Identities=28% Similarity=0.385 Sum_probs=135.0
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
..++++|||||++|+|+|..|++++ .+|+++++. .++|.+++++.+.+.+.|++.||+++++ +|
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v 241 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGRIG--------------SEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKV 241 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHT--------------CEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCEECSEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcC--------------CcEEEEEcCCcccccccHHHHHHHHHHHHHcCCEEEeCCEE
Confidence 4689999999999999999999887 899999997 8899999999999999999999999999 89
Q ss_pred EEEeCC----eEEEc---CC--cEEEeeEEEEcCCCCCch-h--hhccCCCCCCCCccccCCCcccCCCCCEEEeccccc
Q 023375 91 KDVDSQ----KLILN---DG--TEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSG 158 (283)
Q Consensus 91 ~~v~~~----~v~~~---~g--~~i~~d~vi~a~G~~~~~-~--~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 158 (283)
++++.+ .+.++ +| +++++|.||+|+|.+|+. + +++++++++++|+|.||+++|+ +.|+|||+|||+.
T Consensus 242 ~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~ 320 (470)
T 1dxl_A 242 VGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFST-NVSGVYAIGDVIP 320 (470)
T ss_dssp EEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTCBC-SSTTEEECSTTSS
T ss_pred EEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCCcc-CCCCEEEEeccCC
Confidence 999864 24443 45 689999999999999994 4 5778888888899999999998 8999999999995
Q ss_pred cCcCCCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 159 YLESTGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 159 ~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
. |++++.|.+||+++|+||..
T Consensus 321 ~---------~~~~~~A~~~g~~aa~~i~g 341 (470)
T 1dxl_A 321 G---------PMLAHKAEEDGVACVEYLAG 341 (470)
T ss_dssp S---------CCCHHHHHHHHHHHHHHHTT
T ss_pred C---------CccHHHHHHHHHHHHHHHcC
Confidence 2 67899999999999999863
No 28
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.92 E-value=4.5e-24 Score=197.35 Aligned_cols=160 Identities=26% Similarity=0.395 Sum_probs=137.4
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCC-CCCHHHHHHHHHHHHhCCCEEEeC-
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATTQLSKSGVRLVRG- 88 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~-~~~~~~~~~~~~~l~~~gV~v~~~- 88 (283)
+..++++|||||++|+|+|..|++++ .+|+++++. .+++ .+++++.+.+.+.+++.||+++++
T Consensus 147 ~~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~ 212 (452)
T 2cdu_A 147 PKAKTITIIGSGYIGAELAEAYSNQN--------------YNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGS 212 (452)
T ss_dssp GGCSEEEEECCSHHHHHHHHHHHTTT--------------CEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESS
T ss_pred ccCCeEEEECcCHHHHHHHHHHHhcC--------------CEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCC
Confidence 35789999999999999999999887 899999997 7888 799999999999999999999999
Q ss_pred ceEEEeC--CeE--EEcCCcEEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcC-
Q 023375 89 IVKDVDS--QKL--ILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES- 162 (283)
Q Consensus 89 ~V~~v~~--~~v--~~~~g~~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~- 162 (283)
+|++++. +.+ ...+|+++++|.||+|+|.+|+ ++++.. ++++++|+|.||+++|+ +.|+|||+|||+..+.+
T Consensus 213 ~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~~~ll~~~-l~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~~~~~ 290 (452)
T 2cdu_A 213 KVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPNTELLKGK-VAMLDNGAIITDEYMHS-SNRDIFAAGDSAAVHYNP 290 (452)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCGGGTTT-SCBCTTSCBCCCTTSBC-SSTTEEECSTTBCEEETT
T ss_pred eeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCCHHHHHHh-hhcCCCCCEEECCCcCc-CCCCEEEcceEEEecccc
Confidence 8999975 333 2347889999999999999999 566666 77778899999999999 99999999999976443
Q ss_pred CCCcCCCcchHHHHHHHHHHHHHHH
Q 023375 163 TGKTVLPALAQVAERQGKYLFSLLN 187 (283)
Q Consensus 163 ~~~~~~p~~~~~A~~qg~~~a~~i~ 187 (283)
.+....+++++.|.+||+++|+||.
T Consensus 291 ~g~~~~~~~~~~A~~~g~~aa~~i~ 315 (452)
T 2cdu_A 291 TNSNAYIPLATNAVRQGRLVGLNLT 315 (452)
T ss_dssp TTEEECCCCHHHHHHHHHHHHHTSS
T ss_pred CCCeeecchHHHHHHHHHHHHHHhC
Confidence 1222246889999999999999985
No 29
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.91 E-value=4.8e-24 Score=197.35 Aligned_cols=152 Identities=28% Similarity=0.455 Sum_probs=134.0
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
..++++|||||++|+|+|..|++++ .+|+++++. .++|.+++++.+.+.+.|++.||+++++ +|
T Consensus 169 ~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v 234 (455)
T 1ebd_A 169 VPKSLVVIGGGYIGIELGTAYANFG--------------TKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALA 234 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEESEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcC--------------CcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 4689999999999999999999887 899999997 8899999999999999999999999999 89
Q ss_pred EEEeCC--eE--EEc---CCcEEEeeEEEEcCCCCCch-h--hhccCCCCCCCCccccCCCcccCCCCCEEEeccccccC
Q 023375 91 KDVDSQ--KL--ILN---DGTEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYL 160 (283)
Q Consensus 91 ~~v~~~--~v--~~~---~g~~i~~d~vi~a~G~~~~~-~--~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~ 160 (283)
++++.+ .+ .++ +++++++|.||+|+|.+|+. + ++.++++++++|++.||+++|+ +.|+|||+|||+..
T Consensus 235 ~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~- 312 (455)
T 1ebd_A 235 KGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRT-SVPNIFAIGDIVPG- 312 (455)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSSS-
T ss_pred EEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCccc-CCCCEEEEeccCCC-
Confidence 998743 33 443 45689999999999999984 4 5677888888899999999998 89999999999952
Q ss_pred cCCCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 161 ESTGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 161 ~~~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
|++++.|.+||+++|+||..
T Consensus 313 --------~~~~~~A~~~g~~aa~~i~~ 332 (455)
T 1ebd_A 313 --------PALAHKASYEGKVAAEAIAG 332 (455)
T ss_dssp --------CCCHHHHHHHHHHHHHHHTS
T ss_pred --------cccHHHHHHHHHHHHHHHcC
Confidence 67889999999999999863
No 30
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.91 E-value=6.9e-24 Score=198.50 Aligned_cols=152 Identities=25% Similarity=0.377 Sum_probs=136.6
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
..++++|||||++|+|+|..|..++ .+|+++++. .+++.+++++.+.+.+.+++.||+++++ +|
T Consensus 181 ~~~~vvViGgG~ig~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~V 246 (499)
T 1xdi_A 181 LPDHLIVVGSGVTGAEFVDAYTELG--------------VPVTVVASQDHVLPYEDADAALVLEESFAERGVRLFKNARA 246 (499)
T ss_dssp CCSSEEEESCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSSCCSSHHHHHHHHHHHHHTTCEEETTCCE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcC--------------CeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 4589999999999999999999887 899999998 8899999999999999999999999999 89
Q ss_pred EEEeCC----eEEEcCCcEEEeeEEEEcCCCCCch-h--hhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcCC
Q 023375 91 KDVDSQ----KLILNDGTEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST 163 (283)
Q Consensus 91 ~~v~~~----~v~~~~g~~i~~d~vi~a~G~~~~~-~--~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~ 163 (283)
++++.+ .+.+.+|+++++|.||+|+|.+|+. + +++++++++++|+|.||+++|+ +.|+|||+|||+..
T Consensus 247 ~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~---- 321 (499)
T 1xdi_A 247 ASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRT-LATGIYAAGDCTGL---- 321 (499)
T ss_dssp EEEEECSSSEEEEETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCSSSBC-SSTTEEECSGGGTS----
T ss_pred EEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECCCccc-CCCCEEEEeccCCC----
Confidence 999754 2455688899999999999999995 5 6778898888899999999999 89999999999952
Q ss_pred CCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 164 GKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 164 ~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
|+.++.|.+||+++|+||..
T Consensus 322 -----~~l~~~A~~~g~~aa~~i~g 341 (499)
T 1xdi_A 322 -----LPLASVAAMQGRIAMYHALG 341 (499)
T ss_dssp -----CSCHHHHHHHHHHHHHHHTT
T ss_pred -----cccHHHHHHHHHHHHHHhcC
Confidence 67889999999999999863
No 31
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.91 E-value=7.1e-24 Score=196.85 Aligned_cols=153 Identities=24% Similarity=0.356 Sum_probs=134.4
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHH-HhCCCEEEeC-c
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQL-SKSGVRLVRG-I 89 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l-~~~gV~v~~~-~ 89 (283)
..++++|||||++|+|+|..|++++ .+|+++++. .++|.+++++.+.+.+.| ++.||+++++ +
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~ 238 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLG--------------AEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTK 238 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCEEECSCE
T ss_pred CCceEEEECCCHHHHHHHHHHHHhC--------------CEEEEEecCCcccccCCHHHHHHHHHHHhhcCCcEEEeCCE
Confidence 4689999999999999999999887 899999997 899999999999999999 9999999999 8
Q ss_pred eEEEeCC----eEEEc--CC--cEEEeeEEEEcCCCCCch-h--hhccCCCCCCCCccccCCCcccCCCCCEEEeccccc
Q 023375 90 VKDVDSQ----KLILN--DG--TEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSG 158 (283)
Q Consensus 90 V~~v~~~----~v~~~--~g--~~i~~d~vi~a~G~~~~~-~--~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 158 (283)
|++++.+ .+.++ +| +++++|.||+|+|.+|+. + ++.++++.+++|+|.||+++|+ +.|+|||+|||+.
T Consensus 239 v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 317 (468)
T 2qae_A 239 VVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFET-SIPDVYAIGDVVD 317 (468)
T ss_dssp EEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGBS
T ss_pred EEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCccc-CCCCEEEeeccCC
Confidence 9999753 24554 66 679999999999999994 4 5778898888899999999998 8999999999995
Q ss_pred cCcCCCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 159 YLESTGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 159 ~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
. .|++++.|.+||+++|+||..
T Consensus 318 ~--------~~~~~~~A~~~g~~aa~~i~~ 339 (468)
T 2qae_A 318 K--------GPMLAHKAEDEGVACAEILAG 339 (468)
T ss_dssp S--------SCSCHHHHHHHHHHHHHHHTT
T ss_pred C--------CCccHhHHHHHHHHHHHHHcC
Confidence 1 377899999999999999863
No 32
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.91 E-value=8.6e-24 Score=196.12 Aligned_cols=152 Identities=25% Similarity=0.440 Sum_probs=136.5
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
..++++|||||++|+|+|..|++++ .+|+++++. .+++.+++++.+.+.+.+++.||+++++ +|
T Consensus 165 ~~~~vvVvGgG~~g~e~A~~l~~~G--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v 230 (463)
T 2r9z_A 165 QPKRVAIIGAGYIGIELAGLLRSFG--------------SEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAV 230 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESSCCE
T ss_pred cCCEEEEECCCHHHHHHHHHHHhcC--------------CEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 4689999999999999999999887 899999997 8889999999999999999999999999 89
Q ss_pred EEEeCC----eEEEcCCc-EEEeeEEEEcCCCCCch--h-hhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcC
Q 023375 91 KDVDSQ----KLILNDGT-EVPYGLLVWSTGVGPST--L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES 162 (283)
Q Consensus 91 ~~v~~~----~v~~~~g~-~i~~d~vi~a~G~~~~~--~-~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~ 162 (283)
++++.+ .|++++|+ ++++|.||+|+|.+|+. + +++++++++++|+|.||+++|+ +.|+|||+|||+.
T Consensus 231 ~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~---- 305 (463)
T 2r9z_A 231 AALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNT-NVPGVYALGDITG---- 305 (463)
T ss_dssp EEEEEETTEEEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSBC-SSTTEEECGGGGT----
T ss_pred EEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCcc-CCCCEEEEeecCC----
Confidence 998753 57778998 89999999999999984 3 5677888888899999999998 8999999999984
Q ss_pred CCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 163 TGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 163 ~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
.+..++.|.+||+.+|.||..
T Consensus 306 -----~~~~~~~A~~~g~~aa~~i~g 326 (463)
T 2r9z_A 306 -----RDQLTPVAIAAGRRLAERLFD 326 (463)
T ss_dssp -----SCCCHHHHHHHHHHHHHHHHS
T ss_pred -----CcccHHHHHHHHHHHHHHHcC
Confidence 267889999999999999863
No 33
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.91 E-value=8.5e-24 Score=194.44 Aligned_cols=158 Identities=25% Similarity=0.376 Sum_probs=136.3
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCC-CCHHHHHHHHHHHHhCCCEEEeC-c
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-FDDRLRHYATTQLSKSGVRLVRG-I 89 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~-~~~~~~~~~~~~l~~~gV~v~~~-~ 89 (283)
..++|+|||||++|+|+|..|++.+ .+|+++++. .+++. +++++.+.+.+.+++.||+++++ +
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~G--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~ 213 (431)
T 1q1r_A 148 ADNRLVVIGGGYIGLEVAATAIKAN--------------MHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQ 213 (431)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCC
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCC--------------CEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCE
Confidence 4689999999999999999999887 899999997 77775 89999999999999999999999 8
Q ss_pred eEEEeC----C---eEEEcCCcEEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCc
Q 023375 90 VKDVDS----Q---KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLE 161 (283)
Q Consensus 90 V~~v~~----~---~v~~~~g~~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~ 161 (283)
|++++. + .|++++|+++++|.||+|+|.+|+ ++++.++++.+ +| +.||+++|+ +.|+|||+|||+..+.
T Consensus 214 v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~-~g-i~Vd~~~~t-s~~~IyA~GD~~~~~~ 290 (431)
T 1q1r_A 214 VCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELASAAGLQVD-NG-IVINEHMQT-SDPLIMAVGDCARFHS 290 (431)
T ss_dssp EEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBS-SS-EECCTTSBC-SSTTEEECGGGEEEEE
T ss_pred EEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcchhhccCCCCC-CC-EEECCCccc-CCCCEEEEEeEEEEcc
Confidence 999874 2 477889999999999999999998 68888898875 45 999999999 8999999999998654
Q ss_pred CC-CCcCCCcchHHHHHHHHHHHHHHH
Q 023375 162 ST-GKTVLPALAQVAERQGKYLFSLLN 187 (283)
Q Consensus 162 ~~-~~~~~p~~~~~A~~qg~~~a~~i~ 187 (283)
+. +......+++.|.+||+++|+||.
T Consensus 291 ~~~g~~~~~~~~~~A~~qg~~aa~~i~ 317 (431)
T 1q1r_A 291 QLYDRWVRIESVPNALEQARKIAAILC 317 (431)
T ss_dssp TTTTEEEECCSHHHHHHHHHHHHHHHT
T ss_pred ccCCceEeeCHHHHHHHHHHHHHHHhc
Confidence 32 211224578899999999999986
No 34
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.91 E-value=7.9e-24 Score=196.40 Aligned_cols=152 Identities=26% Similarity=0.330 Sum_probs=134.9
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
..++++|||||++|+|+|..|++++ .+|+++++. .+++.+++++.+.+.+.|++.||+++++ +|
T Consensus 168 ~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v 233 (464)
T 2eq6_A 168 LPKRLLVIGGGAVGLELGQVYRRLG--------------AEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKA 233 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCC--------------CeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcCCEE
Confidence 4589999999999999999999887 899999997 8899999999999999999999999999 89
Q ss_pred EEEeCC----eEEEc-C--Cc--EEEeeEEEEcCCCCCch-h--hhccCCCCCCCCccccCCCcccCCCCCEEEeccccc
Q 023375 91 KDVDSQ----KLILN-D--GT--EVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSG 158 (283)
Q Consensus 91 ~~v~~~----~v~~~-~--g~--~i~~d~vi~a~G~~~~~-~--~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 158 (283)
++++.+ .++++ + |+ ++++|.||+|+|.+|+. + ++.++++.+++|++.||+++|+ +.|+|||+|||+.
T Consensus 234 ~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~ 312 (464)
T 2eq6_A 234 VGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMET-SVPGVYAIGDAAR 312 (464)
T ss_dssp EEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTC
T ss_pred EEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCccc-CCCCEEEEeccCC
Confidence 998643 25555 6 76 89999999999999984 3 4677888888899999999998 8999999999995
Q ss_pred cCcCCCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 159 YLESTGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 159 ~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
. |++++.|..||+.+|+||..
T Consensus 313 ~---------~~l~~~A~~~g~~aa~~i~g 333 (464)
T 2eq6_A 313 P---------PLLAHKAMREGLIAAENAAG 333 (464)
T ss_dssp S---------SCCHHHHHHHHHHHHHHHTT
T ss_pred C---------cccHHHHHHHHHHHHHHhcC
Confidence 2 67899999999999999863
No 35
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.91 E-value=3.6e-23 Score=191.91 Aligned_cols=151 Identities=23% Similarity=0.373 Sum_probs=136.7
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
..++++|||||++|+|+|..++.++ .+|+++++. .+++.+++++.+.+.+.|++.||+++++ +|
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~~g--------------~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v 234 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHGLG--------------VKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDII 234 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSCCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcC--------------CeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEECCCEE
Confidence 4689999999999999999999887 899999997 7889999999999999999999999999 89
Q ss_pred EEEeCC-----eEE-EcCCcEEEeeEEEEcCCCCCchh---hhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCc
Q 023375 91 KDVDSQ-----KLI-LNDGTEVPYGLLVWSTGVGPSTL---VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLE 161 (283)
Q Consensus 91 ~~v~~~-----~v~-~~~g~~i~~d~vi~a~G~~~~~~---~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~ 161 (283)
++++.+ .|+ +++|+ +++|.||+|+|.+|+.. ++.++++++++|++.||+++|+ +.|+|||+|||+.
T Consensus 235 ~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~iya~GD~~~--- 309 (463)
T 4dna_A 235 QSVSADADGRRVATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRT-STPGIYALGDVTD--- 309 (463)
T ss_dssp EEEEECTTSCEEEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSGGGS---
T ss_pred EEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCC-CCCCEEEEEecCC---
Confidence 998753 466 77887 99999999999999953 6778999999999999999997 9999999999995
Q ss_pred CCCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 162 STGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 162 ~~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
.+++++.|..||+++|+||..
T Consensus 310 ------~~~~~~~A~~~g~~aa~~i~g 330 (463)
T 4dna_A 310 ------RVQLTPVAIHEAMCFIETEYK 330 (463)
T ss_dssp ------SCCCHHHHHHHHHHHHHHHHS
T ss_pred ------CCCChHHHHHHHHHHHHHHcC
Confidence 278899999999999999864
No 36
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.91 E-value=1.9e-23 Score=194.57 Aligned_cols=160 Identities=21% Similarity=0.386 Sum_probs=139.2
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
..++|+|||||++|+|+|..|++++ .+|+++++. .+++.+++++.+.+.+.+++.||+++++ +|
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v 250 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELG--------------KKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTNENV 250 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTT--------------CEEEEECCGGGTTSSSCHHHHHHHHHHHHHTTCEEECSCCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcC--------------CeEEEEEeCCchhhcCCHHHHHHHHHHHHHcCcEEEcCCEE
Confidence 6789999999999999999999887 899999997 7889999999999999999999999999 89
Q ss_pred EEEeCCe----EEEcCCcEEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcCC-C
Q 023375 91 KDVDSQK----LILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST-G 164 (283)
Q Consensus 91 ~~v~~~~----v~~~~g~~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~-~ 164 (283)
++++.+. +.+ +++++++|.||+|+|.+|+ ++++.++++++++|+|.||+++|+ +.|+|||+|||+..+... +
T Consensus 251 ~~i~~~~~v~~v~~-~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~~~G~I~Vd~~~~t-s~p~IyA~GD~~~~~~~~~g 328 (480)
T 3cgb_A 251 KAFKGNERVEAVET-DKGTYKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAYMQT-NVQDVYAAGDCATHYHVIKE 328 (480)
T ss_dssp EEEEESSBEEEEEE-TTEEEECSEEEECSCEEESCGGGTTSCCCBCTTSCBCCCTTSBC-SSTTEEECGGGBCEEBTTTC
T ss_pred EEEEcCCcEEEEEE-CCCEEEcCEEEECcCCCcChHHHHhCCcccCCCCCEEECCCccC-CCCCEEEeeeEEEecCCCCC
Confidence 9987542 334 4568999999999999998 578888898888899999999999 899999999999765432 2
Q ss_pred CcCCCcchHHHHHHHHHHHHHHHH
Q 023375 165 KTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 165 ~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
....+++++.|..||+++|+||..
T Consensus 329 ~~~~~~~~~~A~~qg~~aa~~i~g 352 (480)
T 3cgb_A 329 IHDHIPIGTTANKQGRLAGLNMLD 352 (480)
T ss_dssp SEECCCCHHHHHHHHHHHHHHHTT
T ss_pred cceecchHHHHHHHHHHHHHHhcC
Confidence 223467899999999999999863
No 37
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.91 E-value=1.6e-23 Score=191.08 Aligned_cols=164 Identities=21% Similarity=0.307 Sum_probs=141.3
Q ss_pred CeEEEEccC-------------------c------HHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHH
Q 023375 15 LHCVVVGGG-------------------P------TGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDR 69 (283)
Q Consensus 15 ~~vvVvGgG-------------------~------~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~ 69 (283)
.+++|||+| . .|+|+|..+++..++ ...+++.+|+++++..+++.+++.
T Consensus 146 ~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~------~g~~~~~~v~~~~~~~~l~~~~~~ 219 (409)
T 3h8l_A 146 GGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKK------KGMLDKVHVTVFSPGEYLSDLSPN 219 (409)
T ss_dssp SEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHT------TTCTTTEEEEEECSSSSSTTBCHH
T ss_pred CCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHH------cCCCCCeEEEEEeCCccccccCHH
Confidence 577899999 2 589999888765421 111234699999998788889999
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceEEEeCCeEEEcCCcEEEeeEEEEcCCCCCchhhhccCCC-CCCCCccccCCCcccCCC
Q 023375 70 LRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP-KSPGGRIGIDEWLRVPSV 147 (283)
Q Consensus 70 ~~~~~~~~l~~~gV~v~~~-~V~~v~~~~v~~~~g~~i~~d~vi~a~G~~~~~~~~~~~l~-~~~~g~i~Vd~~l~~~~~ 147 (283)
+.+.+.+.+++.||+++++ +|++++++.|++++|+++++|.+|+++|.+|++++.+++.. .+++|++.||+++|++++
T Consensus 220 ~~~~~~~~l~~~gV~~~~~~~v~~i~~~~v~~~~g~~~~~D~vi~a~G~~~~~~l~~~~~~l~~~~G~i~vd~~~~~~~~ 299 (409)
T 3h8l_A 220 SRKAVASIYNQLGIKLVHNFKIKEIREHEIVDEKGNTIPADITILLPPYTGNPALKNSTPDLVDDGGFIPTDLNMVSIKY 299 (409)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEECSSEEEETTSCEEECSEEEEECCEECCHHHHTSCGGGSCTTSCBCBBTTSBBSSC
T ss_pred HHHHHHHHHHHCCCEEEcCCceEEECCCeEEECCCCEEeeeEEEECCCCCccHHHHhccccCcCCCCCEEeCcccccCCC
Confidence 9999999999999999999 89999999999999999999999999999999888887333 367799999999999899
Q ss_pred CCEEEeccccccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 148 QDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 148 ~~VfaiGD~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
||||++|||+.+ +.|++++.|..||+++|+||...+.
T Consensus 300 ~~vfa~GD~~~~-------~~~~~~~~A~~q~~~aa~~i~~~l~ 336 (409)
T 3h8l_A 300 DNVYAVGDANSM-------TVPKLGYLAVMTGRIAAQHLANRLG 336 (409)
T ss_dssp TTEEECGGGBTT-------CCSCCHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEeehhccC-------CCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999974 3588999999999999999998873
No 38
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.91 E-value=8e-24 Score=197.80 Aligned_cols=163 Identities=18% Similarity=0.250 Sum_probs=135.6
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCC-CCCCHHHHHHHHHHHHhCCCEEEeC-c
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL-SSFDDRLRHYATTQLSKSGVRLVRG-I 89 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l-~~~~~~~~~~~~~~l~~~gV~v~~~-~ 89 (283)
..++|+|||||++|+|+|..|++.+++ .+.+|+++++. .++ +.+++.+.+.+.+.+++.||+++++ +
T Consensus 179 ~~~~vvViGgG~iG~E~A~~l~~~~~~----------~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~~ 248 (493)
T 1m6i_A 179 EVKSITIIGGGFLGSELACALGRKARA----------LGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAI 248 (493)
T ss_dssp HCSEEEEECCSHHHHHHHHHHHHHHHH----------HTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECSCC
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhhhh----------cCCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCEEEeCCE
Confidence 478999999999999999999886421 02789999986 444 4578899999999999999999999 8
Q ss_pred eEEEeC--C--eEEEcCCcEEEeeEEEEcCCCCCc-hhhhccCCCCCC-CCccccCCCcccCCCCCEEEeccccccCcCC
Q 023375 90 VKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSP-GGRIGIDEWLRVPSVQDVFAVGDCSGYLEST 163 (283)
Q Consensus 90 V~~v~~--~--~v~~~~g~~i~~d~vi~a~G~~~~-~~~~~~~l~~~~-~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~ 163 (283)
|++++. + .|++.+|+++++|.||+|+|.+|+ .+++.+++++++ +|++.||+++|+ .|+|||+|||+..+++.
T Consensus 249 V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl~~~~~~ggi~Vd~~l~t--~~~IyA~GD~a~~~~~~ 326 (493)
T 1m6i_A 249 VQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQA--RSNIWVAGDAACFYDIK 326 (493)
T ss_dssp EEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCTTHHHHTCCBCTTTCSEECCTTCEE--ETTEEECGGGEEEEETT
T ss_pred EEEEEecCCeEEEEECCCCEEECCEEEECCCCCccHHHHHHcCCccccCCCcEEECCCccc--CCCeeEeeeeEeccCcc
Confidence 999864 2 477889999999999999999999 477788888875 688999999997 59999999999865542
Q ss_pred CCcCCCcchHHHHHHHHHHHHHHH
Q 023375 164 GKTVLPALAQVAERQGKYLFSLLN 187 (283)
Q Consensus 164 ~~~~~p~~~~~A~~qg~~~a~~i~ 187 (283)
.+.....+++.|..||+++|+||.
T Consensus 327 ~g~~~~~~~~~A~~qg~~aa~ni~ 350 (493)
T 1m6i_A 327 LGRRRVEHHDHAVVSGRLAGENMT 350 (493)
T ss_dssp TEEECCCCHHHHHHHHHHHHHHHT
T ss_pred cCccccchHHHHHHHHHHHHHHhc
Confidence 222345678899999999999986
No 39
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.91 E-value=4.1e-23 Score=194.41 Aligned_cols=154 Identities=24% Similarity=0.318 Sum_probs=134.0
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
+-+++++|||||++|+|+|..++.++ .+||++++.++||.+++++++.+.+.|++.||+++++ .+
T Consensus 221 ~lP~~lvIIGgG~IGlE~A~~~~~lG--------------~~VTii~~~~~L~~~D~ei~~~l~~~l~~~gi~~~~~~~v 286 (542)
T 4b1b_A 221 KDPGKTLVVGASYVALECSGFLNSLG--------------YDVTVAVRSIVLRGFDQQCAVKVKLYMEEQGVMFKNGILP 286 (542)
T ss_dssp SCCCSEEEECCSHHHHHHHHHHHHHT--------------CCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETCCE
T ss_pred cCCceEEEECCCHHHHHHHHHHHhcC--------------CeEEEecccccccccchhHHHHHHHHHHhhcceeecceEE
Confidence 35689999999999999999999998 8999999888999999999999999999999999999 78
Q ss_pred EEEeCC----eEEEcCCcEEEeeEEEEcCCCCCch-h--hhccCCCCCCCCc-cccCCCcccCCCCCEEEeccccccCcC
Q 023375 91 KDVDSQ----KLILNDGTEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGR-IGIDEWLRVPSVQDVFAVGDCSGYLES 162 (283)
Q Consensus 91 ~~v~~~----~v~~~~g~~i~~d~vi~a~G~~~~~-~--~~~~~l~~~~~g~-i~Vd~~l~~~~~~~VfaiGD~a~~~~~ 162 (283)
++++.+ .|.+.+++++.+|.|++|+|.+||. . ++..++.++.++. +.||+++|| +.|+|||+|||+.
T Consensus 287 ~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~T-s~p~IyAiGDv~~---- 361 (542)
T 4b1b_A 287 KKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCT-NIPSIFAVGDVAE---- 361 (542)
T ss_dssp EEEEEETTEEEEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSBC-SSTTEEECTTSBT----
T ss_pred EEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEeccccccc-cCCCeEEeccccC----
Confidence 887643 3667788899999999999999994 2 4455777766555 588899998 9999999999984
Q ss_pred CCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 163 TGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 163 ~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
..|.+++.|..||+++++|+..
T Consensus 362 ----~~p~La~~A~~eg~~aa~~i~g 383 (542)
T 4b1b_A 362 ----NVPELAPVAIKAGEILARRLFK 383 (542)
T ss_dssp ----TCCCCHHHHHHHHHHHHHHHHS
T ss_pred ----CchhHHHHHHHHHHHHHHHHhc
Confidence 2478999999999999999864
No 40
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.91 E-value=1.1e-23 Score=191.54 Aligned_cols=203 Identities=14% Similarity=0.166 Sum_probs=147.7
Q ss_pred cHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CC--CCCCCHHHHHHHHHHHHhCCCEEEeC-ceEEEeC----
Q 023375 24 PTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EI--LSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS---- 95 (283)
Q Consensus 24 ~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~--l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~---- 95 (283)
..+.|.+.++++..+. . ..+.+|++++.. .+ ++.+++.+.+.+.+.+++.||+++++ +++.++.
T Consensus 163 ~a~~e~~~~~a~~~~~----~----~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~ 234 (401)
T 3vrd_B 163 PGPYERASQIAHYLKA----H----KSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGPDAAVVKTDTEA 234 (401)
T ss_dssp THHHHHHHHHHHHHHH----H----CTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTTTTCEEEEETTT
T ss_pred hHHHHHHHHHHHHHHh----c----CCCCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEeCceEEEEEecccc
Confidence 4567777777765422 1 123799999987 43 34466777777777888999999998 6766643
Q ss_pred CeEEEcCCcEEEeeEEEEcCCCCCchhhhccCCCCCCCCccccCCC-cccCCCCCEEEeccccccCcCCCCcCCCcchHH
Q 023375 96 QKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEW-LRVPSVQDVFAVGDCSGYLESTGKTVLPALAQV 174 (283)
Q Consensus 96 ~~v~~~~g~~i~~d~vi~a~G~~~~~~~~~~~l~~~~~g~i~Vd~~-l~~~~~~~VfaiGD~a~~~~~~~~~~~p~~~~~ 174 (283)
..+++++|+++++|+++|++|.+|+++++++++ .+++|+|.||++ ||++++|||||+|||+.. .+.|++++.
T Consensus 235 ~~v~~~~g~~i~~D~vi~~~g~~~~~~~~~~gl-~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~------~~~pk~a~~ 307 (401)
T 3vrd_B 235 MTVETSFGETFKAAVINLIPPQRAGKIAQSASL-TNDSGWCPVDIRTFESSLQPGIHVIGDACNA------APMPKSAYS 307 (401)
T ss_dssp TEEEETTSCEEECSEEEECCCEEECHHHHHTTC-CCTTSSBCBCTTTCBBSSSTTEEECGGGBCC------TTSCBSHHH
T ss_pred eEEEcCCCcEEEeeEEEEecCcCCchhHhhccc-cccCCCEEECCCcceecCCCCEEEecccccC------CCCCchHHH
Confidence 268899999999999999999999999999998 477899999976 887799999999999952 357999999
Q ss_pred HHHHHHHHHHHHHHHhhhCCCCCCCcCCCCCCCCceeeecccEE-EecCcceeEecccc----------ccCCCeeeecH
Q 023375 175 AERQGKYLFSLLNRIGKAGGGRANSAKDMELGDPFVYRHLGSMA-TIGRYKALVDLRQN----------KESKGLSLAGF 243 (283)
Q Consensus 175 A~~qg~~~a~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~-slG~~~av~~~~~~----------~~~~~~~~~G~ 243 (283)
|.+||+++|+||.+.++ |+ ++ .++.|...+.|. ..|....+...+.+ +...+....++
T Consensus 308 A~~qa~v~A~ni~~~l~---G~-------~~-~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 376 (401)
T 3vrd_B 308 ANSQAKVAAAAVVALLK---GE-------EP-GTPSYLNTCYSILAPGYGISIAAVYRPNAEGKAIEAVPDSGGITPVDA 376 (401)
T ss_dssp HHHHHHHHHHHHHHHHH---TC-------CC-CCCCEEEEEEEEEETTEEEEEEEEEEECTTSSSEEECTTCCEESCTTC
T ss_pred HHHHHHHHHHHHHHHhc---CC-------CC-CCcccCCeEEEEEecCCceEEEEEecccCCCceEEEecccCCcccccc
Confidence 99999999999999987 44 22 566676655442 22222222211111 01134566788
Q ss_pred HHHHHHHHH
Q 023375 244 LSWLVWRSA 252 (283)
Q Consensus 244 ~a~~~~~~~ 252 (283)
.+|++|+-.
T Consensus 377 ~~~~~~~~~ 385 (401)
T 3vrd_B 377 PDWVLEREV 385 (401)
T ss_dssp CHHHHHHHH
T ss_pred hhHHHhccc
Confidence 899887643
No 41
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.91 E-value=4.9e-23 Score=192.45 Aligned_cols=152 Identities=18% Similarity=0.222 Sum_probs=135.2
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
..++++|||||++|+|+|..|++++ .+|+++++. ++++.+++++.+.+.+.|++. |+++++ +|
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v 237 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLG--------------VIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAKARV 237 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTT--------------CEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETTCEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcC--------------CeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEECCEE
Confidence 4689999999999999999999987 899999998 889999999999999999998 999999 89
Q ss_pred EEEeCC--e--EEEc--CC--cEEEeeEEEEcCCCCCch-h--hhccCCCCCCCCccccC-CCcccCCCCCEEEeccccc
Q 023375 91 KDVDSQ--K--LILN--DG--TEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGID-EWLRVPSVQDVFAVGDCSG 158 (283)
Q Consensus 91 ~~v~~~--~--v~~~--~g--~~i~~d~vi~a~G~~~~~-~--~~~~~l~~~~~g~i~Vd-~~l~~~~~~~VfaiGD~a~ 158 (283)
++++.+ . +.+. +| +++++|.||+|+|.+|+. + ++.++++.+++|++.|| +++|+ +.|+|||+|||+.
T Consensus 238 ~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t-~~~~IyA~GD~~~ 316 (492)
T 3ic9_A 238 ISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQT-SVDHIFVAGDANN 316 (492)
T ss_dssp EEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBC-SSTTEEECGGGGT
T ss_pred EEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccC-CCCCEEEEEecCC
Confidence 998643 3 4454 67 689999999999999994 4 67789999999999999 99999 8999999999995
Q ss_pred cCcCCCCcCCCcchHHHHHHHHHHHHHHHHH
Q 023375 159 YLESTGKTVLPALAQVAERQGKYLFSLLNRI 189 (283)
Q Consensus 159 ~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~ 189 (283)
. ++.++.|..||+++|.||...
T Consensus 317 ~---------~~~~~~A~~~g~~aa~~i~~~ 338 (492)
T 3ic9_A 317 T---------LTLLHEAADDGKVAGTNAGAY 338 (492)
T ss_dssp S---------SCSHHHHHHHHHHHHHHHHHT
T ss_pred C---------CccHHHHHHHHHHHHHHHcCC
Confidence 2 778999999999999999863
No 42
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.91 E-value=2.9e-23 Score=192.11 Aligned_cols=152 Identities=27% Similarity=0.369 Sum_probs=135.1
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
..++++|||||++|+|+|..|++.+ .+|+++++. .++|.+++++.+.+.+.+++.||+++++ +|
T Consensus 166 ~~~~vvIiGgG~~g~e~A~~l~~~g--------------~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V 231 (455)
T 2yqu_A 166 VPKRLIVVGGGVIGLELGVVWHRLG--------------AEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRV 231 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcC--------------CEEEEEecCCccccccCHHHHHHHHHHHHHCCCEEEECCEE
Confidence 4589999999999999999999887 899999997 7899999999999999999999999999 89
Q ss_pred EEEeCC--e--EEEcCCcEEEeeEEEEcCCCCCch-h--hhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcCC
Q 023375 91 KDVDSQ--K--LILNDGTEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST 163 (283)
Q Consensus 91 ~~v~~~--~--v~~~~g~~i~~d~vi~a~G~~~~~-~--~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~ 163 (283)
++++.+ . +.+++|+++++|.||+|+|.+|+. + ++.++++.+++|++.||+++|+ +.|+||++|||+..
T Consensus 232 ~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~t-~~~~iya~GD~~~~---- 306 (455)
T 2yqu_A 232 TAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRT-RVPHIYAIGDVVRG---- 306 (455)
T ss_dssp EEEEEETTEEEEEETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSBC-SSTTEEECGGGSSS----
T ss_pred EEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCccc-CCCCEEEEecCCCC----
Confidence 998643 3 455688899999999999999984 3 5677888887899999999998 89999999999852
Q ss_pred CCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 164 GKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 164 ~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
|++++.|..||+.+|+||..
T Consensus 307 -----~~~~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 307 -----PMLAHKASEEGIAAVEHMVR 326 (455)
T ss_dssp -----CCCHHHHHHHHHHHHHHHHH
T ss_pred -----ccCHHHHHHhHHHHHHHHcC
Confidence 67899999999999999975
No 43
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.91 E-value=8.3e-23 Score=190.67 Aligned_cols=153 Identities=22% Similarity=0.386 Sum_probs=133.8
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeC-ceE
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVK 91 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~ 91 (283)
.+++++|||||++|+|+|..|++++ .+|+++++..+++.+++++.+.+.+.|++.||+++++ +++
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g--------------~~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~gv~~~~~~~v~ 249 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTGIG--------------LDTTVMMRSIPLRGFDQQMSSLVTEHMESHGTQFLKGCVPS 249 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcC--------------CceEEEEcCcccccCCHHHHHHHHHHHHHCCCEEEeCCEEE
Confidence 4578999999999999999999987 8999999988899999999999999999999999999 888
Q ss_pred EEeC---C--eEEEcC---Cc--EEEeeEEEEcCCCCCch-h--hhccCCCCC-CCCccccCCCcccCCCCCEEEecccc
Q 023375 92 DVDS---Q--KLILND---GT--EVPYGLLVWSTGVGPST-L--VKSLDLPKS-PGGRIGIDEWLRVPSVQDVFAVGDCS 157 (283)
Q Consensus 92 ~v~~---~--~v~~~~---g~--~i~~d~vi~a~G~~~~~-~--~~~~~l~~~-~~g~i~Vd~~l~~~~~~~VfaiGD~a 157 (283)
+++. + .+++.+ |+ ++++|.|++|+|.+|+. + ++..+++++ ++|++.||+++|+ +.|+|||+|||+
T Consensus 250 ~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~ 328 (488)
T 3dgz_A 250 HIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEAT-SVPHIYAIGDVA 328 (488)
T ss_dssp EEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCTTSBC-SSTTEEECGGGB
T ss_pred EEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeECCCCcc-CCCCEEEeEEec
Confidence 8853 2 255544 54 47999999999999984 4 567789888 7899999999998 999999999998
Q ss_pred ccCcCCCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 158 GYLESTGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 158 ~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
. ..|..++.|..||+++|+||..
T Consensus 329 ~--------~~~~~~~~A~~~g~~aa~~i~g 351 (488)
T 3dgz_A 329 E--------GRPELTPTAIKAGKLLAQRLFG 351 (488)
T ss_dssp T--------TCCCCHHHHHHHHHHHHHHHHS
T ss_pred C--------CCCcchhHHHHHHHHHHHHHcC
Confidence 4 2378899999999999999864
No 44
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.90 E-value=9.1e-23 Score=190.14 Aligned_cols=152 Identities=22% Similarity=0.330 Sum_probs=134.1
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeC-ceE
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVK 91 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~ 91 (283)
..++++|||||++|+|+|..|++++ .+|+++++..+++.+++++.+.+.+.|++.||+++++ +|+
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~ 251 (483)
T 3dgh_A 186 EPGKTLVVGAGYIGLECAGFLKGLG--------------YEPTVMVRSIVLRGFDQQMAELVAASMEERGIPFLRKTVPL 251 (483)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSCSSTTSCHHHHHHHHHHHHHTTCCEEETEEEE
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcC--------------CEEEEEeCCCCCcccCHHHHHHHHHHHHhCCCEEEeCCEEE
Confidence 4579999999999999999999987 8999999988899999999999999999999999999 899
Q ss_pred EEeC--C---eEEEcCCc-----EEEeeEEEEcCCCCCch-hh--hccCCCCCCCCccccCCCcccCCCCCEEEeccccc
Q 023375 92 DVDS--Q---KLILNDGT-----EVPYGLLVWSTGVGPST-LV--KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSG 158 (283)
Q Consensus 92 ~v~~--~---~v~~~~g~-----~i~~d~vi~a~G~~~~~-~~--~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 158 (283)
+++. + .|++.+++ ++++|.|++|+|.+|+. ++ +.++++.++ |++.||+++|+ +.|+|||+|||+.
T Consensus 252 ~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~-G~i~vd~~~~t-~~~~IyA~GD~~~ 329 (483)
T 3dgh_A 252 SVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVDSQEAT-NVANIYAVGDIIY 329 (483)
T ss_dssp EEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBT-TBBCCCTTCBC-SSTTEEECSTTBT
T ss_pred EEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccC-CEEEECcCCcc-CCCCEEEEEcccC
Confidence 8864 2 26666553 79999999999999984 43 677898888 99999999998 8999999999984
Q ss_pred cCcCCCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 159 YLESTGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 159 ~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
..|..++.|..||+++|+||..
T Consensus 330 --------~~~~~~~~A~~~g~~aa~~i~g 351 (483)
T 3dgh_A 330 --------GKPELTPVAVLAGRLLARRLYG 351 (483)
T ss_dssp --------TSCCCHHHHHHHHHHHHHHHHS
T ss_pred --------CCCccHHHHHHHHHHHHHHHcC
Confidence 2378899999999999999863
No 45
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.90 E-value=1e-22 Score=189.47 Aligned_cols=153 Identities=29% Similarity=0.417 Sum_probs=135.5
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
..++++|||||++|+|+|..|++++ .+|+++++. ++++.+++++.+.+.+.|++.||+++++ +|
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v 251 (478)
T 3dk9_A 186 LPGRSVIVGAGYIAVEMAGILSALG--------------SKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQV 251 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEETTEEE
T ss_pred cCccEEEECCCHHHHHHHHHHHHcC--------------CeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 3589999999999999999999887 899999997 8899999999999999999999999999 89
Q ss_pred EEEeCC--e----EEEcC---C----cEEEeeEEEEcCCCCCch--h-hhccCCCCCCCCccccCCCcccCCCCCEEEec
Q 023375 91 KDVDSQ--K----LILND---G----TEVPYGLLVWSTGVGPST--L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVG 154 (283)
Q Consensus 91 ~~v~~~--~----v~~~~---g----~~i~~d~vi~a~G~~~~~--~-~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiG 154 (283)
++++.+ + +.+.+ | +++++|.||+|+|.+|+. + ++.++++++++|++.||+++|+ +.|+|||+|
T Consensus 252 ~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~G 330 (478)
T 3dk9_A 252 KEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNT-NVKGIYAVG 330 (478)
T ss_dssp EEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBC-SSTTEEECG
T ss_pred EEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCccc-CCCCEEEEE
Confidence 998642 3 55554 2 679999999999999995 3 6778999989999999999999 999999999
Q ss_pred cccccCcCCCCcCCCcchHHHHHHHHHHHHHHHHH
Q 023375 155 DCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRI 189 (283)
Q Consensus 155 D~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~ 189 (283)
||+. .|..++.|..||+++|+||...
T Consensus 331 D~~~---------~~~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 331 DVCG---------KALLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp GGGC---------SSCCHHHHHHHHHHHHHHHHSC
T ss_pred ecCC---------CCccHhHHHHHHHHHHHHHcCC
Confidence 9993 2788999999999999998743
No 46
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.90 E-value=6.7e-23 Score=190.65 Aligned_cols=153 Identities=24% Similarity=0.349 Sum_probs=135.9
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-c
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-I 89 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~ 89 (283)
...++++|||||++|+|+|..|++++ .+|+++++. .+++.+++++.+.+.+.|++.||+++++ +
T Consensus 178 ~~~~~v~ViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~ 243 (476)
T 3lad_A 178 NVPGKLGVIGAGVIGLELGSVWARLG--------------AEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGAR 243 (476)
T ss_dssp SCCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCE
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHcC--------------CcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEEECCE
Confidence 34689999999999999999999887 899999998 8999999999999999999999999999 8
Q ss_pred eEEEeCC----eEEEcCC---cEEEeeEEEEcCCCCCch---hhhccCCCCCCCCccccCCCcccCCCCCEEEecccccc
Q 023375 90 VKDVDSQ----KLILNDG---TEVPYGLLVWSTGVGPST---LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGY 159 (283)
Q Consensus 90 V~~v~~~----~v~~~~g---~~i~~d~vi~a~G~~~~~---~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~ 159 (283)
|++++.+ .+++.++ +++++|.||+|+|.+|+. .++.++++++++|++.||+++|+ +.|+|||+|||+.
T Consensus 244 v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~- 321 (476)
T 3lad_A 244 VTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCAT-SVPGVYAIGDVVR- 321 (476)
T ss_dssp EEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTSBC-SSTTEEECGGGSS-
T ss_pred EEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCCccc-CCCCEEEEEccCC-
Confidence 9998743 3566654 679999999999999984 26677888888999999999998 9999999999994
Q ss_pred CcCCCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 160 LESTGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 160 ~~~~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
.|.+++.|..||+++|+||..
T Consensus 322 --------~~~~~~~A~~~g~~aa~~i~g 342 (476)
T 3lad_A 322 --------GAMLAHKASEEGVVVAERIAG 342 (476)
T ss_dssp --------SCCCHHHHHHHHHHHHHHHHH
T ss_pred --------CcccHHHHHHHHHHHHHHhcC
Confidence 277899999999999999864
No 47
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.90 E-value=3.1e-23 Score=183.75 Aligned_cols=155 Identities=14% Similarity=0.178 Sum_probs=134.1
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
..++|+|||+|++|+|+|..|++.+ .+|+++++. .+++ .+...+.+.+.+++.||+++.+ +|
T Consensus 151 ~~~~v~viG~G~~g~e~a~~l~~~g--------------~~V~~v~~~~~~~~--~~~~~~~l~~~l~~~gv~v~~~~~v 214 (335)
T 2zbw_A 151 QGKRVLIVGGGDSAVDWALNLLDTA--------------RRITLIHRRPQFRA--HEASVKELMKAHEEGRLEVLTPYEL 214 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTS--------------SEEEEECSSSSCCS--CHHHHHHHHHHHHTTSSEEETTEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhC--------------CEEEEEEcCCccCc--cHHHHHHHHhccccCCeEEecCCcc
Confidence 5689999999999999999998876 899999997 5544 2567788888899999999999 89
Q ss_pred EEEeCC----eEEEc---CC--cEEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccC
Q 023375 91 KDVDSQ----KLILN---DG--TEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYL 160 (283)
Q Consensus 91 ~~v~~~----~v~~~---~g--~~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~ 160 (283)
++++.+ .|+++ +| +++++|.||+|+|.+|+ ++++.++++.+ +|++.||+++|+ +.|+|||+|||+..+
T Consensus 215 ~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~-~g~i~vd~~~~t-~~~~vya~GD~~~~~ 292 (335)
T 2zbw_A 215 RRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGLALE-KNKIKVDTTMAT-SIPGVYACGDIVTYP 292 (335)
T ss_dssp EEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSCCCEE-TTEEECCTTCBC-SSTTEEECSTTEECT
T ss_pred eeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhcceecc-CCeeeeCCCCCC-CCCCEEEeccccccC
Confidence 999765 57776 67 67999999999999998 58888888876 689999999998 899999999999752
Q ss_pred cCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 161 ESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 161 ~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
. .++++..|..||+++|+||...+.
T Consensus 293 ~------~~~~~~~A~~~g~~aa~~i~~~l~ 317 (335)
T 2zbw_A 293 G------KLPLIVLGFGEAAIAANHAAAYAN 317 (335)
T ss_dssp T------CCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred c------chhhhhhhHHHHHHHHHHHHHHhh
Confidence 1 378899999999999999998875
No 48
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.90 E-value=2.5e-23 Score=194.36 Aligned_cols=153 Identities=26% Similarity=0.389 Sum_probs=135.4
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-c
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-I 89 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~ 89 (283)
...++++|||||++|+|+|..|++++ .+|+++++. .+++.+++++.+.+.+.|++.||+++++ +
T Consensus 196 ~~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~~~~ 261 (491)
T 3urh_A 196 KVPASMIVVGGGVIGLELGSVWARLG--------------AKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAK 261 (491)
T ss_dssp SCCSEEEEECCSHHHHHHHHHHHHHT--------------CEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEE
T ss_pred hcCCeEEEECCCHHHHHHHHHHHHcC--------------CEEEEEeccccccccCCHHHHHHHHHHHHhCCCEEEECCe
Confidence 34689999999999999999999887 899999997 8999999999999999999999999999 8
Q ss_pred eEEEeCC--e--EEEcC---C--cEEEeeEEEEcCCCCCch-h--hhccCCCCCCCCccccCCCcccCCCCCEEEecccc
Q 023375 90 VKDVDSQ--K--LILND---G--TEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS 157 (283)
Q Consensus 90 V~~v~~~--~--v~~~~---g--~~i~~d~vi~a~G~~~~~-~--~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a 157 (283)
|++++.+ . +.+++ | +++++|.||+|+|.+|+. + ++..+++++++|++.||+++|+ +.|+|||+|||+
T Consensus 262 v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~ 340 (491)
T 3urh_A 262 VTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQT-SIAGVYAIGDVV 340 (491)
T ss_dssp EEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGS
T ss_pred EEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCCCC-CCCCEEEEEecC
Confidence 9888643 2 55542 4 689999999999999994 3 6677899998999999999999 999999999999
Q ss_pred ccCcCCCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 158 GYLESTGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 158 ~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
. .|++++.|..||+.+|+||..
T Consensus 341 ~---------~~~~~~~A~~~g~~aa~~i~g 362 (491)
T 3urh_A 341 R---------GPMLAHKAEDEGVAVAEIIAG 362 (491)
T ss_dssp S---------SCCCHHHHHHHHHHHHHHHTT
T ss_pred C---------CccchhHHHHHHHHHHHHHcC
Confidence 4 278999999999999999864
No 49
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.90 E-value=5.6e-24 Score=192.90 Aligned_cols=144 Identities=19% Similarity=0.344 Sum_probs=128.8
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCC-CCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-FDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~-~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
.++|+|||||++|+|+|..|++.+ .+|+++++. .+++. +++++.+.+.+.+++.||+++++ +|
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g--------------~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v 211 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSG--------------TPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNF 211 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHT--------------CCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCG
T ss_pred CCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEE
Confidence 689999999999999999999887 899999997 78876 89999999999999999999998 77
Q ss_pred EEEeCCeEEEcCCcEEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcCCCCcCCC
Q 023375 91 KDVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLP 169 (283)
Q Consensus 91 ~~v~~~~v~~~~g~~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~~~~~~p 169 (283)
+++ |+++++|.||+++|.+|+ ++++.++++.+ +| +.||+++|+ +.|+|||+|||+.+++ +.+
T Consensus 212 ~~i---------g~~~~~D~vv~a~G~~p~~~~~~~~gl~~~-~g-i~vd~~~~t-~~~~IyA~GD~a~~~~-----~~~ 274 (385)
T 3klj_A 212 EEM---------GDLIRSSCVITAVGVKPNLDFIKDTEIASK-RG-ILVNDHMET-SIKDIYACGDVAEFYG-----KNP 274 (385)
T ss_dssp GGC---------HHHHHHSEEEECCCEEECCGGGTTSCCCBS-SS-EEECTTCBC-SSTTEEECGGGEEETT-----BCC
T ss_pred EEc---------CeEEecCeEEECcCcccChhhhhhcCCCcC-CC-EEECCCccc-CCCCEEEEEeeEecCC-----Ccc
Confidence 766 677999999999999999 68888888775 45 999999999 9999999999998642 347
Q ss_pred cchHHHHHHHHHHHHHHHH
Q 023375 170 ALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 170 ~~~~~A~~qg~~~a~~i~~ 188 (283)
.+++.|.+||+.+|+||..
T Consensus 275 ~~~~~A~~qg~~aa~~i~g 293 (385)
T 3klj_A 275 GLINIANKQGEVAGLNACG 293 (385)
T ss_dssp CCHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHhcC
Confidence 7899999999999999864
No 50
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.90 E-value=6.8e-23 Score=185.57 Aligned_cols=153 Identities=23% Similarity=0.356 Sum_probs=133.4
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCC-CCHHHHHHHHHHHHhCCCEEEeC-c
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-FDDRLRHYATTQLSKSGVRLVRG-I 89 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~-~~~~~~~~~~~~l~~~gV~v~~~-~ 89 (283)
..++++|||||++|+|+|..|++.+ .+|+++++. .+++. +++.+.+.+.+.+++.||+++++ +
T Consensus 144 ~~~~v~ViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~ 209 (384)
T 2v3a_A 144 GKRRVLLLGAGLIGCEFANDLSSGG--------------YQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPV 209 (384)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCC
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCE
Confidence 4789999999999999999999887 899999997 77776 48999999999999999999999 8
Q ss_pred eEEEeCC----eEEEcCCcEEEeeEEEEcCCCCCch-hhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcCCC
Q 023375 90 VKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTG 164 (283)
Q Consensus 90 V~~v~~~----~v~~~~g~~i~~d~vi~a~G~~~~~-~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~~ 164 (283)
|++++.+ .+++++|+++++|.||+|+|.+|+. +++.++++.+ +| +.||+++|+ +.|+|||+|||+....
T Consensus 210 v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~~l~~~~g~~~~-~g-i~vd~~~~t-~~~~IyA~GD~~~~~~--- 283 (384)
T 2v3a_A 210 LASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVN-RG-IVVDRSLRT-SHANIYALGDCAEVDG--- 283 (384)
T ss_dssp EEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCHHHHHTTCCBS-SS-EEECTTCBC-SSTTEEECGGGEEETT---
T ss_pred EEEEEecCCEEEEEECCCCEEECCEEEECcCCCcCHHHHHHCCCCCC-CC-EEECCCCCC-CCCCEEEeeeeeeECC---
Confidence 9998643 4777889999999999999999994 7888899887 57 999999998 8999999999996421
Q ss_pred CcCCCcchHHHHHHHHHHHHHHH
Q 023375 165 KTVLPALAQVAERQGKYLFSLLN 187 (283)
Q Consensus 165 ~~~~p~~~~~A~~qg~~~a~~i~ 187 (283)
...+.++.|..||+++|+||.
T Consensus 284 --~~~~~~~~a~~~g~~~a~~i~ 304 (384)
T 2v3a_A 284 --LNLLYVMPLMACARALAQTLA 304 (384)
T ss_dssp --BCCCSHHHHHHHHHHHHHHHT
T ss_pred --CCcchHHHHHHHHHHHHHHhc
Confidence 123457789999999999986
No 51
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.90 E-value=2.9e-23 Score=191.99 Aligned_cols=160 Identities=23% Similarity=0.371 Sum_probs=135.6
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCC-CCHHHHHHHHHHHHhCCCEEEeC-
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-FDDRLRHYATTQLSKSGVRLVRG- 88 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~-~~~~~~~~~~~~l~~~gV~v~~~- 88 (283)
...++++|||||++|+|+|..|++++ .+|+++++. .+++. +++++.+.+.+.+++.||+++++
T Consensus 145 ~~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~ 210 (452)
T 3oc4_A 145 ENSQTVAVIGAGPIGMEAIDFLVKMK--------------KTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEE 210 (452)
T ss_dssp HTCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETC
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCC--------------CeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 46789999999999999999999887 899999997 78886 89999999999999999999999
Q ss_pred ceEEEe--CCe--EEEcCCcEEEeeEEEEcCCCCCch-hhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcC-
Q 023375 89 IVKDVD--SQK--LILNDGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES- 162 (283)
Q Consensus 89 ~V~~v~--~~~--v~~~~g~~i~~d~vi~a~G~~~~~-~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~- 162 (283)
+|++++ ++. |.++++ ++++|.||+|+|.+|+. ++.. .++++++|++.||+++|+ +.|+|||+|||+..+.+
T Consensus 211 ~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~~~~l~~-~~~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~~ 287 (452)
T 3oc4_A 211 TVLGIEETANGIVLETSEQ-EISCDSGIFALNLHPQLAYLDK-KIQRNLDQTIAVDAYLQT-SVPNVFAIGDCISVMNEP 287 (452)
T ss_dssp CEEEEEECSSCEEEEESSC-EEEESEEEECSCCBCCCSSCCT-TSCBCTTSCBCCCTTCBC-SSTTEEECGGGBCEEEGG
T ss_pred EEEEEEccCCeEEEEECCC-EEEeCEEEECcCCCCChHHHHh-hhccCCCCCEEECcCccC-CCCCEEEEEeeEEecccc
Confidence 899997 333 566666 89999999999999994 4443 377788899999999999 89999999999975432
Q ss_pred CCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 163 TGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 163 ~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
.+....+++++.|..||+++|+||..
T Consensus 288 ~~~~~~~~~~~~A~~~g~~aa~~i~g 313 (452)
T 3oc4_A 288 VAETFYAPLVNNAVRTGLVVANNLEE 313 (452)
T ss_dssp GTEEECCCCHHHHHHHHHHHTTSSSS
T ss_pred CCceeecchHHHHHHHHHHHHHHhcC
Confidence 12223467899999999999999753
No 52
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.90 E-value=9.3e-23 Score=189.29 Aligned_cols=148 Identities=22% Similarity=0.324 Sum_probs=131.7
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCC-CHHHHHHHHHHHHhCCCEEEeC-c
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSF-DDRLRHYATTQLSKSGVRLVRG-I 89 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~-~~~~~~~~~~~l~~~gV~v~~~-~ 89 (283)
..++++|||||++|+|+|..|++++ .+|+++++. ++++.+ ++++.+.+.+.|+ |+++++ +
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~~~~ 233 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRLMG--------------VQTHIIEMLDRALITLEDQDIVNTLLSILK---LNIKFNSP 233 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSCTTSCCHHHHHHHHHHHC---CCEECSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcC--------------CEEEEEEeCCcCCCCCCCHHHHHHHHhcCE---EEEEECCE
Confidence 4579999999999999999999887 899999997 889888 9999999988887 999999 8
Q ss_pred eEEEeC---Ce--EEEc--CCc--EEEeeEEEEcCCCCCchh--hhccCCCCCCCCccccCCCcccCCCCCEEEeccccc
Q 023375 90 VKDVDS---QK--LILN--DGT--EVPYGLLVWSTGVGPSTL--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSG 158 (283)
Q Consensus 90 V~~v~~---~~--v~~~--~g~--~i~~d~vi~a~G~~~~~~--~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 158 (283)
|++++. +. +.++ +|+ ++++|.||+|+|.+|+.. ++.++++++++| +.||+++|+ +.|+|||+|||+.
T Consensus 234 v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~gl~~~~~G-i~vd~~~~t-~~~~Iya~GD~~~ 311 (466)
T 3l8k_A 234 VTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEGAREIGLSISKTG-IVVDETMKT-NIPNVFATGDANG 311 (466)
T ss_dssp EEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEECCCTTTGGGTCCBCSSS-BCCCTTCBC-SSTTEEECGGGTC
T ss_pred EEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcccccchhhcCceeCCCC-EeECCCccC-CCCCEEEEEecCC
Confidence 998876 33 5666 565 899999999999999954 678899999899 999999999 9999999999995
Q ss_pred cCcCCCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 159 YLESTGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 159 ~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
. |++++.|..||+++|+||..
T Consensus 312 ~---------~~~~~~A~~~g~~aa~~i~~ 332 (466)
T 3l8k_A 312 L---------APYYHAAVRMSIAAANNIMA 332 (466)
T ss_dssp S---------CCSHHHHHHHHHHHHHHHHT
T ss_pred C---------CccHhHHHHHHHHHHHHHhC
Confidence 2 78899999999999999874
No 53
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.90 E-value=7.2e-23 Score=190.91 Aligned_cols=152 Identities=26% Similarity=0.384 Sum_probs=138.3
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
..++++|||||++|+|+|..|++.+ .+|+++++. .+++.+++++.+.+.+.+++.||+++++ +|
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g--------------~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V 255 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLG--------------VKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEATV 255 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEESSCCE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcC--------------CeEEEEECCCccccccCHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 4689999999999999999999887 899999997 8899999999999999999999999998 89
Q ss_pred EEEeCC----eEEEcCCcEEEeeEEEEcCCCCCch-h--hhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcCC
Q 023375 91 KDVDSQ----KLILNDGTEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST 163 (283)
Q Consensus 91 ~~v~~~----~v~~~~g~~i~~d~vi~a~G~~~~~-~--~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~ 163 (283)
++++.+ .|++++|+++++|.||+|+|.+|+. + ++..+++++++|++.||+++|+ +.|+|||+|||+.
T Consensus 256 ~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~----- 329 (484)
T 3o0h_A 256 SQVQSTENCYNVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTT-NVSHIWAVGDVTG----- 329 (484)
T ss_dssp EEEEECSSSEEEEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGT-----
T ss_pred EEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCC-CCCCEEEEEecCC-----
Confidence 998764 4778899999999999999999995 3 5778899999999999999998 9999999999985
Q ss_pred CCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 164 GKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 164 ~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
.+++++.|..||+++|+||..
T Consensus 330 ----~~~~~~~A~~~g~~aa~~i~~ 350 (484)
T 3o0h_A 330 ----HIQLTPVAIHDAMCFVKNAFE 350 (484)
T ss_dssp ----SCCCHHHHHHHHHHHHHHHHC
T ss_pred ----CCcCHHHHHHHHHHHHHHHcC
Confidence 278899999999999999874
No 54
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.90 E-value=6e-23 Score=189.57 Aligned_cols=158 Identities=28% Similarity=0.410 Sum_probs=135.9
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCC-CCCHHHHHHHHHHHHhCCCEEEeC-c
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATTQLSKSGVRLVRG-I 89 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~-~~~~~~~~~~~~~l~~~gV~v~~~-~ 89 (283)
..++++|||||++|+|+|..|++.+ .+|+++++. .+++ .+++++.+.+.+.+++.||+++++ +
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~ 213 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAG--------------KKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGET 213 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC--------------CeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCE
Confidence 6789999999999999999999887 899999997 7887 689999999999999999999999 8
Q ss_pred eEEEeCCe----EEEcCCcEEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcC-C
Q 023375 90 VKDVDSQK----LILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES-T 163 (283)
Q Consensus 90 V~~v~~~~----v~~~~g~~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~-~ 163 (283)
|++++.+. +.+ +++++++|.||+|+|.+|+ ++++.. ++.+.+|++.||+++|+ +.|+|||+|||+..+.. .
T Consensus 214 v~~i~~~~~v~~v~~-~~~~i~~d~vi~a~G~~p~~~~~~~~-~~~~~~G~i~Vd~~~~t-~~~~Iya~GD~~~~~~~~~ 290 (447)
T 1nhp_A 214 VERYEGDGRVQKVVT-DKNAYDADLVVVAVGVRPNTAWLKGT-LELHPNGLIKTDEYMRT-SEPDVFAVGDATLIKYNPA 290 (447)
T ss_dssp EEEEECSSBCCEEEE-SSCEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCCTTCBC-SSTTEEECGGGSCEEEGGG
T ss_pred EEEEEccCcEEEEEE-CCCEEECCEEEECcCCCCChHHHHhh-hhhcCCCcEEECccccC-CCCCEEEeeeEEEeeccCC
Confidence 99997652 444 5678999999999999998 566666 77777899999999999 89999999999975432 1
Q ss_pred CCcCCCcchHHHHHHHHHHHHHHH
Q 023375 164 GKTVLPALAQVAERQGKYLFSLLN 187 (283)
Q Consensus 164 ~~~~~p~~~~~A~~qg~~~a~~i~ 187 (283)
+....+++++.|.+||+++|+||.
T Consensus 291 g~~~~~~~~~~A~~qg~~aa~~i~ 314 (447)
T 1nhp_A 291 DTEVNIALATNARKQGRFAVKNLE 314 (447)
T ss_dssp TEEECCCCHHHHHHHHHHHHHTSS
T ss_pred CCceechhHHHHHHHHHHHHHhhc
Confidence 222246789999999999999985
No 55
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.90 E-value=4.2e-23 Score=191.25 Aligned_cols=151 Identities=31% Similarity=0.459 Sum_probs=133.7
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
..++++|||||++|+|+|..|++.+ .+|+++++. .++|.+++++.+.+.+.+++.||+++++ +|
T Consensus 170 ~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v 235 (458)
T 1lvl_A 170 LPQHLVVVGGGYIGLELGIAYRKLG--------------AQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSV 235 (458)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHT--------------CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETTCEE
T ss_pred cCCeEEEECcCHHHHHHHHHHHHCC--------------CeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEECCEE
Confidence 3579999999999999999999887 899999997 8899999999999999999999999999 89
Q ss_pred EEEeCCeEEEc--CC--cEEEeeEEEEcCCCCCch-h--hhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcCC
Q 023375 91 KDVDSQKLILN--DG--TEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST 163 (283)
Q Consensus 91 ~~v~~~~v~~~--~g--~~i~~d~vi~a~G~~~~~-~--~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~ 163 (283)
++++.+.+.+. +| +++++|.||+|+|.+|+. + ++.++++.+++ ++.||+++|+ +.|+|||+|||+..
T Consensus 236 ~~i~~~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~-~i~vd~~~~t-~~~~Iya~GD~~~~---- 309 (458)
T 1lvl_A 236 EGYENGCLLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA-AIAIDERCQT-SMHNVWAIGDVAGE---- 309 (458)
T ss_dssp EEEETTEEEEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETT-EECCCTTCBC-SSTTEEECGGGGCS----
T ss_pred EEEEeCCEEEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC-EEeECCCCcC-CCCCEEEeeccCCC----
Confidence 99987545554 56 689999999999999994 3 57778887776 8999999998 89999999999952
Q ss_pred CCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 164 GKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 164 ~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
|++++.|..||+.+|+||..
T Consensus 310 -----~~~~~~A~~~g~~aa~~i~g 329 (458)
T 1lvl_A 310 -----PMLAHRAMAQGEMVAEIIAG 329 (458)
T ss_dssp -----SCCHHHHHHHHHHHHHHHTT
T ss_pred -----cccHHHHHHHHHHHHHHhcC
Confidence 67899999999999999863
No 56
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.89 E-value=1.4e-22 Score=188.07 Aligned_cols=150 Identities=21% Similarity=0.292 Sum_probs=132.3
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
..++++|||||++|+|+|..|++++ .+|+++++. .++| +++++.+.+.+.+++.||+++++ +|
T Consensus 175 ~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~Gv~i~~~~~v 239 (467)
T 1zk7_A 175 IPERLAVIGSSVVALELAQAFARLG--------------SKVTVLARNTLFFR-EDPAIGEAVTAAFRAEGIEVLEHTQA 239 (467)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSCTTTT-SCHHHHHHHHHHHHHTTCEEETTCCE
T ss_pred cCCEEEEECCCHHHHHHHHHHHHcC--------------CEEEEEEECCccCC-CCHHHHHHHHHHHHhCCCEEEcCCEE
Confidence 4689999999999999999999887 899999997 8888 99999999999999999999999 89
Q ss_pred EEEeCC----eEEEcCCcEEEeeEEEEcCCCCCch-h--hhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcCC
Q 023375 91 KDVDSQ----KLILNDGTEVPYGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST 163 (283)
Q Consensus 91 ~~v~~~----~v~~~~g~~i~~d~vi~a~G~~~~~-~--~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~ 163 (283)
++++.+ .|.++ ++++++|.||+|+|.+|+. + ++.++++.+++|++.||+++|+ +.|+|||+|||+..
T Consensus 240 ~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~---- 313 (467)
T 1zk7_A 240 SQVAHMDGEFVLTTT-HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRT-SNPNIYAAGDCTDQ---- 313 (467)
T ss_dssp EEEEEETTEEEEEET-TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSTTBSS----
T ss_pred EEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCccc-CCCCEEEEeccCCC----
Confidence 988643 24454 5689999999999999984 2 4677888888899999999998 89999999999953
Q ss_pred CCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 164 GKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 164 ~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
|..++.|.+||+++|.||..
T Consensus 314 -----~~~~~~A~~~g~~aa~~i~~ 333 (467)
T 1zk7_A 314 -----PQFVYVAAAAGTRAAINMTG 333 (467)
T ss_dssp -----CCCHHHHHHHHHHHHHHHTT
T ss_pred -----cccHHHHHHHHHHHHHHHcC
Confidence 66789999999999999853
No 57
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.89 E-value=4.9e-22 Score=186.83 Aligned_cols=153 Identities=20% Similarity=0.330 Sum_probs=131.0
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeC-ceE
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVK 91 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~ 91 (283)
..++++|||||++|+|+|..|++++ .+|+++++..+++.+++++.+.+.+.|++.||+++++ +++
T Consensus 209 ~~~~vvVIGgG~ig~E~A~~l~~~G--------------~~Vtlv~~~~~l~~~d~~~~~~~~~~l~~~GV~v~~~~~v~ 274 (519)
T 3qfa_A 209 CPGKTLVVGASYVALECAGFLAGIG--------------LDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPI 274 (519)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEESEEEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcC--------------CeEEEEecccccccCCHHHHHHHHHHHHHCCCEEEeCCeEE
Confidence 4578999999999999999999987 8999999988999999999999999999999999998 666
Q ss_pred EEeC------Ce--EEE--cCC-c--EEEeeEEEEcCCCCCch-h--hhccCCCCC-CCCccccCCCcccCCCCCEEEec
Q 023375 92 DVDS------QK--LIL--NDG-T--EVPYGLLVWSTGVGPST-L--VKSLDLPKS-PGGRIGIDEWLRVPSVQDVFAVG 154 (283)
Q Consensus 92 ~v~~------~~--v~~--~~g-~--~i~~d~vi~a~G~~~~~-~--~~~~~l~~~-~~g~i~Vd~~l~~~~~~~VfaiG 154 (283)
+++. +. +.+ .++ + ++++|.|++|+|.+|+. + ++.++++++ ++|+|.||+++|+ +.|+|||+|
T Consensus 275 ~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd~~~~T-s~~~IyA~G 353 (519)
T 3qfa_A 275 KVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQT-NVPYIYAIG 353 (519)
T ss_dssp EEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCCTTSBC-SSTTEEECG
T ss_pred EEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeCCCCcc-CCCCEEEEE
Confidence 6642 22 322 355 2 57899999999999984 3 567788887 5799999999998 999999999
Q ss_pred cccccCcCCCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 155 DCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 155 D~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
||+. ..|+.++.|..||+++|+||..
T Consensus 354 D~~~--------g~~~~~~~A~~~g~~aa~~i~g 379 (519)
T 3qfa_A 354 DILE--------DKVELTPVAIQAGRLLAQRLYA 379 (519)
T ss_dssp GGBS--------SSCCCHHHHHHHHHHHHHHHHS
T ss_pred eccC--------CCCccHHHHHHHHHHHHHHHcC
Confidence 9984 2378899999999999999863
No 58
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.89 E-value=2.3e-22 Score=176.56 Aligned_cols=155 Identities=26% Similarity=0.395 Sum_probs=131.5
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-c
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-I 89 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~ 89 (283)
.+.++|+|||+|++|+|+|..|.+.+ .+|+++++. .+++ .+. ...+.+++.||+++.+ +
T Consensus 152 ~~~~~v~vvG~G~~~~e~a~~l~~~g--------------~~v~~~~~~~~~~~--~~~---~~~~~~~~~gv~~~~~~~ 212 (323)
T 3f8d_A 152 FKNRVVAVIGGGDSALEGAEILSSYS--------------TKVYLIHRRDTFKA--QPI---YVETVKKKPNVEFVLNSV 212 (323)
T ss_dssp GTTCEEEEECCSHHHHHHHHHHHHHS--------------SEEEEECSSSSCCS--CHH---HHHHHHTCTTEEEECSEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHhC--------------CeEEEEEeCCCCCc--CHH---HHHHHHhCCCcEEEeCCE
Confidence 45689999999999999999999876 899999997 5555 232 2334444569999999 7
Q ss_pred eEEEeCC----eEEEcC---Cc--EEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEecccccc
Q 023375 90 VKDVDSQ----KLILND---GT--EVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGY 159 (283)
Q Consensus 90 V~~v~~~----~v~~~~---g~--~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~ 159 (283)
|++++.+ .|++.+ |+ ++++|.||+++|.+|+ ++++.++++++++|++.||+++++ +.|+||++|||+..
T Consensus 213 v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~ 291 (323)
T 3f8d_A 213 VKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRT-SVPGVFAAGDCTSA 291 (323)
T ss_dssp EEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEECCHHHHHHTTCCBCTTSSBCCCTTCBC-SSTTEEECSTTBST
T ss_pred EEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCCChhHHhhcCeeecCCCcEecCCCcee-cCCCEEEcceecCC
Confidence 9999765 477765 76 7999999999999999 788889999999999999999998 89999999999964
Q ss_pred CcCCCCcCCCcchHHHHHHHHHHHHHHHHHhhh
Q 023375 160 LESTGKTVLPALAQVAERQGKYLFSLLNRIGKA 192 (283)
Q Consensus 160 ~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~~ 192 (283)
+ +.|+++..|..||+.+|.||.+.+..
T Consensus 292 ~------~~~~~~~~A~~~g~~aa~~i~~~l~~ 318 (323)
T 3f8d_A 292 W------LGFRQVITAVAQGAVAATSAYRYVTE 318 (323)
T ss_dssp T------TTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred C------CcccceeehhhHHHHHHHHHHHHHHH
Confidence 2 24889999999999999999998873
No 59
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.89 E-value=6.9e-22 Score=188.82 Aligned_cols=153 Identities=21% Similarity=0.370 Sum_probs=131.6
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeC-ceE
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVK 91 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~ 91 (283)
..++|+|||||++|+|+|..|++++ .+|+++++..+++.+++++.+.+.+.|++.||+++++ .++
T Consensus 285 ~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~ 350 (598)
T 2x8g_A 285 FPGKTLVIGASYVALECAGFLASLG--------------GDVTVMVRSILLRGFDQQMAEKVGDYMENHGVKFAKLCVPD 350 (598)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--------------CEEEEEECCcCcCcCCHHHHHHHHHHHHhCCCEEEECCeEE
Confidence 4578999999999999999999987 8999999888888999999999999999999999998 677
Q ss_pred EEe--------C---CeEE----EcCCcEEE--eeEEEEcCCCCCch-h--hhccCCCCCCCCccccCCCcccCCCCCEE
Q 023375 92 DVD--------S---QKLI----LNDGTEVP--YGLLVWSTGVGPST-L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVF 151 (283)
Q Consensus 92 ~v~--------~---~~v~----~~~g~~i~--~d~vi~a~G~~~~~-~--~~~~~l~~~~~g~i~Vd~~l~~~~~~~Vf 151 (283)
+++ . +.+. +.+|++++ +|.||+|+|.+|+. + ++.++++++++|+|.||+++|+ +.|+||
T Consensus 351 ~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-s~~~Vy 429 (598)
T 2x8g_A 351 EIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQT-TVSNVY 429 (598)
T ss_dssp EEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCBCCCTTSBC-SSTTEE
T ss_pred EEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCceECCCCcEEeCCCCcC-CCCCEE
Confidence 763 2 3332 35777665 99999999999994 4 4677888888899999999998 899999
Q ss_pred EeccccccCcCCCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 152 AVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 152 aiGD~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
|+|||+. ..+..++.|.+||+.+|+||..
T Consensus 430 A~GD~~~--------~~~~~~~~A~~~g~~aa~~i~~ 458 (598)
T 2x8g_A 430 AIGDINA--------GKPQLTPVAIQAGRYLARRLFA 458 (598)
T ss_dssp ECGGGBT--------TSCCCHHHHHHHHHHHHHHHHH
T ss_pred EEeeecC--------CCCccHHHHHHhHHHHHHHHhc
Confidence 9999974 1367899999999999999874
No 60
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.89 E-value=3.5e-22 Score=175.99 Aligned_cols=152 Identities=20% Similarity=0.221 Sum_probs=127.2
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
...++|+|||||++|+|+|..|++.+ .+|+++++...+. ..+. +.+.+.+.||+++++ +|
T Consensus 153 ~~~~~v~viG~G~~g~e~a~~l~~~g--------------~~V~~i~~~~~~~-~~~~----l~~~l~~~gv~i~~~~~v 213 (319)
T 3cty_A 153 FKGKRVVTIGGGNSGAIAAISMSEYV--------------KNVTIIEYMPKYM-CENA----YVQEIKKRNIPYIMNAQV 213 (319)
T ss_dssp GBTSEEEEECCSHHHHHHHHHHTTTB--------------SEEEEECSSSSCC-SCHH----HHHHHHHTTCCEECSEEE
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhhC--------------CcEEEEEcCCccC-CCHH----HHHHHhcCCcEEEcCCeE
Confidence 34589999999999999999999876 8999999873332 2333 445566899999999 89
Q ss_pred EEEeCC-----eEEEc---CCc--EEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEecccccc
Q 023375 91 KDVDSQ-----KLILN---DGT--EVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGY 159 (283)
Q Consensus 91 ~~v~~~-----~v~~~---~g~--~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~ 159 (283)
+++..+ .|++. +|+ ++++|.||+|+|.+|+ +++..++++.+++|++.||+++++ +.|+|||+|||+..
T Consensus 214 ~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~ 292 (319)
T 3cty_A 214 TEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDERGYIVVDSRQRT-SVPGVYAAGDVTSG 292 (319)
T ss_dssp EEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECCGGGTTSCCCBCTTSCBCCCTTCBC-SSTTEEECSTTBTT
T ss_pred EEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccChHHHhhccccccCCccEeCCCCCcc-CCCCEEEeecccCc
Confidence 998754 36665 565 6899999999999999 677888888888899999999998 89999999999952
Q ss_pred CcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 160 LESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 160 ~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
.++++..|+.||+.+|.||.+.+.
T Consensus 293 --------~~~~~~~A~~~g~~aa~~i~~~l~ 316 (319)
T 3cty_A 293 --------NFAQIASAVGDGCKAALSLYSDSI 316 (319)
T ss_dssp --------CCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred --------chhhHHHHHHHHHHHHHHHHHHhh
Confidence 257899999999999999998875
No 61
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.89 E-value=4.1e-22 Score=175.30 Aligned_cols=153 Identities=22% Similarity=0.247 Sum_probs=129.8
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-c
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-I 89 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~ 89 (283)
...++|+|||+|++|+|+|..|++.+ .+|+++++. .+. .++.+.+.+.+.+++.||+++++ +
T Consensus 143 ~~~~~v~ViG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~--~~~~~~~~l~~~l~~~gv~i~~~~~ 206 (320)
T 1trb_A 143 YRNQKVAVIGGGNTAVEEALYLSNIA--------------SEVHLIHRRDGFR--AEKILIKRLMDKVENGNIILHTNRT 206 (320)
T ss_dssp GTTSEEEEECSSHHHHHHHHHHTTTS--------------SEEEEECSSSSCC--CCHHHHHHHHHHHHTSSEEEECSCE
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhcC--------------CeEEEEEeCCccc--cCHHHHHHHHHhcccCCeEEEcCce
Confidence 35689999999999999999999876 899999987 443 36778888889999999999999 8
Q ss_pred eEEEeCCe-----EEEcC----C--cEEEeeEEEEcCCCCCch-hhhccCCCCCCCCccccCCCc-----ccCCCCCEEE
Q 023375 90 VKDVDSQK-----LILND----G--TEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWL-----RVPSVQDVFA 152 (283)
Q Consensus 90 V~~v~~~~-----v~~~~----g--~~i~~d~vi~a~G~~~~~-~~~~~~l~~~~~g~i~Vd~~l-----~~~~~~~Vfa 152 (283)
|++++.+. |++++ | +++++|.||+|+|.+|+. ++. .+++.+ +|++.||+++ ++ +.|+||+
T Consensus 207 v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~-~~l~~~-~G~i~vd~~~~~~~~~t-~~~~vya 283 (320)
T 1trb_A 207 LEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFE-GQLELE-NGYIKVQSGIHGNATQT-SIPGVFA 283 (320)
T ss_dssp EEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGGT-TTSCEE-TTEECCCCSSSSCTTBC-SSTTEEE
T ss_pred eEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHhc-cccccc-CceEEECCCcccccccC-CCCCEEE
Confidence 99997553 77764 4 579999999999999984 444 567777 8999999987 55 8999999
Q ss_pred eccccccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 153 VGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 153 iGD~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
+|||+.. .++++..|+.||+.+|.||...+.
T Consensus 284 ~GD~~~~--------~~~~~~~A~~~g~~aa~~i~~~l~ 314 (320)
T 1trb_A 284 AGDVMDH--------IYRQAITSAGTGCMAALDAERYLD 314 (320)
T ss_dssp CGGGGCS--------SSCCHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccCC--------cchhhhhhhccHHHHHHHHHHHHH
Confidence 9999963 267899999999999999999886
No 62
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.89 E-value=4.3e-22 Score=174.59 Aligned_cols=151 Identities=19% Similarity=0.221 Sum_probs=125.3
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHH-hCCCEEEeC-ce
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLS-KSGVRLVRG-IV 90 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~-~~gV~v~~~-~V 90 (283)
..++|+|||+|++|+|+|..|++.+ .+|+++++...++ .++. +.+.+. +.||+++++ +|
T Consensus 142 ~~~~v~VvG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~-~~~~----~~~~l~~~~gv~v~~~~~v 202 (311)
T 2q0l_A 142 KNKEVAVLGGGDTAVEEAIYLANIC--------------KKVYLIHRRDGFR-CAPI----TLEHAKNNDKIEFLTPYVV 202 (311)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHTTS--------------SEEEEECSSSSCC-SCHH----HHHHHHTCTTEEEETTEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcC--------------CEEEEEeeCCccC-CCHH----HHHHHhhCCCeEEEeCCEE
Confidence 4689999999999999999999876 8999999873332 3343 334444 579999999 89
Q ss_pred EEEeCC-----eEEEc---CCc--EEEeeEEEEcCCCCCc-hhhhccC----CCCCCCCccccCCCcccCCCCCEEEecc
Q 023375 91 KDVDSQ-----KLILN---DGT--EVPYGLLVWSTGVGPS-TLVKSLD----LPKSPGGRIGIDEWLRVPSVQDVFAVGD 155 (283)
Q Consensus 91 ~~v~~~-----~v~~~---~g~--~i~~d~vi~a~G~~~~-~~~~~~~----l~~~~~g~i~Vd~~l~~~~~~~VfaiGD 155 (283)
++++.+ .|+++ +|+ ++++|.||+|+|.+|+ +++..++ ++++++|++.||+++|+ +.|+|||+||
T Consensus 203 ~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd~~~~t-~~~~vya~GD 281 (311)
T 2q0l_A 203 EEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSMKT-NVQGLFAAGD 281 (311)
T ss_dssp EEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBC-SSTTEEECST
T ss_pred EEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCccChhhhhcccccceeEeccCCCEEeCCcccc-CCCCeEEccc
Confidence 998754 46765 675 7899999999999998 6777664 77888899999999998 8999999999
Q ss_pred ccccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 156 CSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 156 ~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
|+.. .|+++..|..||+.+|.||.+.+.
T Consensus 282 ~~~~--------~~~~~~~A~~~g~~aa~~i~~~l~ 309 (311)
T 2q0l_A 282 IRIF--------APKQVVCAASDGATAALSVISYLE 309 (311)
T ss_dssp TBTT--------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCc--------chHHHHHHHHhHHHHHHHHHHHHh
Confidence 9963 278899999999999999998775
No 63
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.88 E-value=6.9e-22 Score=174.55 Aligned_cols=152 Identities=20% Similarity=0.282 Sum_probs=124.6
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
...++|+|||+|++|+|+|..|++.+ .+|+++++...+. ..+.+ .++.+++.||+++++ +|
T Consensus 150 ~~~~~v~VvG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~-~~~~~---~~~l~~~~gv~i~~~~~v 211 (325)
T 2q7v_A 150 YKGKKVVVIGGGDAAVEEGMFLTKFA--------------DEVTVIHRRDTLR-ANKVA---QARAFANPKMKFIWDTAV 211 (325)
T ss_dssp GTTCEEEEECCSHHHHHHHHHHTTTC--------------SEEEEECSSSSCC-SCHHH---HHHHHTCTTEEEECSEEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcC--------------CEEEEEeCCCcCC-cchHH---HHHHHhcCCceEecCCce
Confidence 34589999999999999999998876 8999999873222 23332 223334579999999 89
Q ss_pred EEEeCC----eEEEc---CCc--EEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccC
Q 023375 91 KDVDSQ----KLILN---DGT--EVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYL 160 (283)
Q Consensus 91 ~~v~~~----~v~~~---~g~--~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~ 160 (283)
+++..+ .|+++ +|+ ++++|.||+|+|.+|+ ++++.+ ++.+++|++.||+++++ +.|+||++|||+..
T Consensus 212 ~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-~~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~- 288 (325)
T 2q7v_A 212 EEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVKDT-VSLRDDGYVDVRDEIYT-NIPMLFAAGDVSDY- 288 (325)
T ss_dssp EEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCBTTTBC-SSTTEEECSTTTCS-
T ss_pred EEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHHHhhh-cccCCCccEecCCCCcc-CCCCEEEeecccCc-
Confidence 999765 56775 665 7899999999999998 577766 77788899999999998 89999999999963
Q ss_pred cCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 161 ESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 161 ~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
.|+++..|..||+.+|.||...+.
T Consensus 289 -------~~~~~~~A~~~g~~aa~~i~~~l~ 312 (325)
T 2q7v_A 289 -------IYRQLATSVGAGTRAAMMTERQLA 312 (325)
T ss_dssp -------SCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred -------cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 267899999999999999999886
No 64
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.88 E-value=4e-22 Score=178.56 Aligned_cols=155 Identities=19% Similarity=0.235 Sum_probs=132.0
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
..++|+|||+|++|+|+|..|++.+ .+|+++++. .+++. +...+.+.+.+++.||+++.+ +|
T Consensus 162 ~~~~vvVvG~G~~g~e~A~~l~~~g--------------~~V~lv~~~~~~~~~--~~~~~~l~~~~~~~gv~i~~~~~v 225 (360)
T 3ab1_A 162 KGKRVVIVGGGDSALDWTVGLIKNA--------------ASVTLVHRGHEFQGH--GKTAHEVERARANGTIDVYLETEV 225 (360)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTS--------------SEEEEECSSSSCSSC--SHHHHSSHHHHHHTSEEEESSEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcC--------------CEEEEEEcCCCCCCC--HHHHHHHHHHhhcCceEEEcCcCH
Confidence 4689999999999999999998876 899999997 44442 356677788888999999999 89
Q ss_pred EEEeCC-----eEEEc--CC--cEEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccC
Q 023375 91 KDVDSQ-----KLILN--DG--TEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYL 160 (283)
Q Consensus 91 ~~v~~~-----~v~~~--~g--~~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~ 160 (283)
++++.+ .|++. +| +++++|.||+|+|.+|+ ++++.++++.+ +|++.||+++|+ +.|+|||+|||+..+
T Consensus 226 ~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~-~g~i~vd~~~~t-~~~~vya~GD~~~~~ 303 (360)
T 3ab1_A 226 ASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLELY-ENALVVDSHMKT-SVDGLYAAGDIAYYP 303 (360)
T ss_dssp EEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSCCEE-TTEEECCTTSBC-SSTTEEECSTTEECT
T ss_pred HHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhccccc-cCeeeecCCCcC-CCCCEEEecCccCCC
Confidence 998754 56664 77 57999999999999998 58888888876 689999999998 899999999999753
Q ss_pred cCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 161 ESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 161 ~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
. .++++..|..||+++|+||...+.
T Consensus 304 ~------~~~~~~~A~~~g~~aa~~i~~~l~ 328 (360)
T 3ab1_A 304 G------KLKIIQTGLSEATMAVRHSLSYIK 328 (360)
T ss_dssp T------CCCSHHHHHHHHHHHHHHHHHHHS
T ss_pred C------ccceeehhHHHHHHHHHHHHhhcC
Confidence 1 378899999999999999998875
No 65
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.88 E-value=3.6e-22 Score=173.41 Aligned_cols=149 Identities=17% Similarity=0.222 Sum_probs=128.4
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeCceE
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVK 91 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~ 91 (283)
.+.++|+|||+|++|+|+|.+|++. .+|+++++... .+. ..+.+.|++.||+++..+|+
T Consensus 139 ~~~~~v~vvG~G~~~~e~a~~l~~~---------------g~v~~v~~~~~--~~~----~~~~~~l~~~gv~i~~~~v~ 197 (297)
T 3fbs_A 139 LDQGKIGVIAASPMAIHHALMLPDW---------------GETTFFTNGIV--EPD----ADQHALLAARGVRVETTRIR 197 (297)
T ss_dssp GTTCEEEEECCSTTHHHHHHHGGGT---------------SEEEEECTTTC--CCC----HHHHHHHHHTTCEEECSCEE
T ss_pred hcCCEEEEEecCccHHHHHHHhhhc---------------CcEEEEECCCC--CCC----HHHHHHHHHCCcEEEcceee
Confidence 4578999999999999999999764 38999988732 233 34567888999999965899
Q ss_pred EEeCC-eEEEcCCcEEEeeEEEEcCCCCCc-hhhhccCCCCC--CCC-ccccCCCcccCCCCCEEEeccccccCcCCCCc
Q 023375 92 DVDSQ-KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKS--PGG-RIGIDEWLRVPSVQDVFAVGDCSGYLESTGKT 166 (283)
Q Consensus 92 ~v~~~-~v~~~~g~~i~~d~vi~a~G~~~~-~~~~~~~l~~~--~~g-~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~~~~ 166 (283)
+++.+ .|++++|+++++|.||+++|.+|+ ++++.++++.+ ++| ++.||+++++ +.|+|||+|||+..
T Consensus 198 ~i~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~g~~~~~~~~G~~i~vd~~~~t-~~~~vya~GD~~~~------- 269 (297)
T 3fbs_A 198 EIAGHADVVLADGRSIALAGLFTQPKLRITVDWIEKLGCAVEEGPMGSTIVTDPMKQT-TARGIFACGDVARP------- 269 (297)
T ss_dssp EEETTEEEEETTSCEEEESEEEECCEEECCCSCHHHHTCCEEEETTEEEECCCTTCBC-SSTTEEECSGGGCT-------
T ss_pred eeecCCeEEeCCCCEEEEEEEEEccCcccCchhHHhcCCccccCCCCceEEeCCCCcc-CCCCEEEEeecCCc-------
Confidence 99887 899999999999999999999998 67788888776 457 8999999998 89999999999952
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 167 VLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 167 ~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
|+++..|+.||+.+|.||.+.+.
T Consensus 270 --~~~~~~A~~~g~~aa~~i~~~l~ 292 (297)
T 3fbs_A 270 --AGSVALAVGDGAMAGAAAHRSIL 292 (297)
T ss_dssp --TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --hHHHHHHHHhHHHHHHHHHHHHh
Confidence 88999999999999999999886
No 66
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.88 E-value=1.7e-21 Score=170.62 Aligned_cols=151 Identities=23% Similarity=0.301 Sum_probs=124.0
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHh-CCCEEEeC-c
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSK-SGVRLVRG-I 89 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~-~gV~v~~~-~ 89 (283)
...++|+|||+|++|+|+|.+|++.+ .+|+++++...+. +++ .+.+.|++ .||+++++ +
T Consensus 142 ~~~~~v~VvG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~-~~~----~~~~~l~~~~gv~v~~~~~ 202 (310)
T 1fl2_A 142 FKGKRVAVIGGGNSGVEAAIDLAGIV--------------EHVTLLEFAPEMK-ADQ----VLQDKLRSLKNVDIILNAQ 202 (310)
T ss_dssp GBTCEEEEECCSHHHHHHHHHHHTTB--------------SEEEEECSSSSCC-SCH----HHHHHHHTCTTEEEESSEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHhC--------------CEEEEEEeCcccC-ccH----HHHHHHhhCCCeEEecCCc
Confidence 35689999999999999999999876 8999999873332 333 34556666 69999999 8
Q ss_pred eEEEeCC-----eEEEcC---Cc--EEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEeccccc
Q 023375 90 VKDVDSQ-----KLILND---GT--EVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSG 158 (283)
Q Consensus 90 V~~v~~~-----~v~~~~---g~--~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 158 (283)
|+++..+ .|++.+ |+ ++++|.||+|+|.+|+ +++.+. ++++++|++.||+++|+ +.|+|||+|||+.
T Consensus 203 v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-l~~~~~g~i~vd~~~~t-~~~~vya~GD~~~ 280 (310)
T 1fl2_A 203 TTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGA-VERNRMGEIIIDAKCET-NVKGVFAAGDCTT 280 (310)
T ss_dssp EEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCCTTCBC-SSTTEEECSTTBS
T ss_pred eEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHHhcc-ccccCCCcEEcCCCCcc-CCCCEEEeecccC
Confidence 9999754 466653 53 6899999999999998 566653 77778899999999997 8999999999996
Q ss_pred cCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 159 YLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 159 ~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
. .++++..|+.||+.+|.||...+.
T Consensus 281 ~--------~~~~~~~A~~~g~~aa~~i~~~l~ 305 (310)
T 1fl2_A 281 V--------PYKQIIIATGEGAKASLSAFDYLI 305 (310)
T ss_dssp C--------SSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred C--------cchhhhhhHhhHHHHHHHHHHHHH
Confidence 3 246788999999999999999886
No 67
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.88 E-value=1.2e-21 Score=171.46 Aligned_cols=153 Identities=19% Similarity=0.223 Sum_probs=126.5
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
...++++|||+|++|+|+|..|.+.+ .+|+++++...++ ..+. ...+.+++.||+++++ +|
T Consensus 145 ~~~~~v~viG~g~~~~e~a~~l~~~g--------------~~v~~~~~~~~~~-~~~~---~~~~~~~~~gv~~~~~~~v 206 (315)
T 3r9u_A 145 YKNKEVAVLGGGDTALEEALYLANIC--------------SKIYLIHRRDEFR-AAPS---TVEKVKKNEKIELITSASV 206 (315)
T ss_dssp GTTSEEEEECCBHHHHHHHHHHHTTS--------------SEEEEECSSSSCB-SCHH---HHHHHHHCTTEEEECSCEE
T ss_pred cCcCEEEEECCCHHHHHHHHHHHhhC--------------CEEEEEEeCCCCC-CCHH---HHHHHHhcCCeEEEeCcEE
Confidence 45689999999999999999999876 8999999874332 2333 3345567899999999 89
Q ss_pred EEEeCCe-----EEEc--CCc--EEEeeEEEEcCCCCCch-hhhc---cC-CCCCCCCccccCCCcccCCCCCEEEeccc
Q 023375 91 KDVDSQK-----LILN--DGT--EVPYGLLVWSTGVGPST-LVKS---LD-LPKSPGGRIGIDEWLRVPSVQDVFAVGDC 156 (283)
Q Consensus 91 ~~v~~~~-----v~~~--~g~--~i~~d~vi~a~G~~~~~-~~~~---~~-l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~ 156 (283)
++++.+. |++. +|+ ++++|.||+++|.+|+. ++.. ++ ++.+++|++.||+++|+ +.|+|||+|||
T Consensus 207 ~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~t-~~~~v~a~GD~ 285 (315)
T 3r9u_A 207 DEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQT-SVAGLFAAGDL 285 (315)
T ss_dssp EEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBC-SSTTEEECGGG
T ss_pred EEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCccc-CCCCEEEeecc
Confidence 9986543 6666 775 79999999999999995 4443 44 88888899999999999 99999999999
Q ss_pred cccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 157 SGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 157 a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
+.. .|+++..|+.||+.+|.||.+.+.
T Consensus 286 ~~~--------~~~~~~~A~~~g~~aa~~i~~~l~ 312 (315)
T 3r9u_A 286 RKD--------APKQVICAAGDGAVAALSAMAYIE 312 (315)
T ss_dssp BTT--------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCC--------chhhhhhHHhhHHHHHHHHHHHHH
Confidence 852 388999999999999999999886
No 68
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.87 E-value=9.8e-22 Score=173.34 Aligned_cols=153 Identities=16% Similarity=0.202 Sum_probs=129.1
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
.+.++++|||+|++|+|+|..|++.+ .+|+++++...+...++. .+.|++.||+++.+ +|
T Consensus 152 ~~~~~v~vvG~g~~~~e~a~~l~~~~--------------~~v~~~~~~~~~~~~~~~-----~~~l~~~gv~~~~~~~v 212 (332)
T 3lzw_A 152 FAGRRVAILGGGDSAVDWALMLEPIA--------------KEVSIIHRRDKFRAHEHS-----VENLHASKVNVLTPFVP 212 (332)
T ss_dssp GBTCEEEEECSSHHHHHHHHHHTTTB--------------SEEEEECSSSSCSSCHHH-----HHHHHHSSCEEETTEEE
T ss_pred cCCCEEEEECCCHhHHHHHHHHHhhC--------------CeEEEEEecCcCCccHHH-----HHHHhcCCeEEEeCcee
Confidence 35689999999999999999998876 899999998433333322 34478899999999 89
Q ss_pred EEEeCCe----EEEcC-----CcEEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccC
Q 023375 91 KDVDSQK----LILND-----GTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYL 160 (283)
Q Consensus 91 ~~v~~~~----v~~~~-----g~~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~ 160 (283)
++++.+. |++++ ++++++|.||+|+|.+|+ ++++.++++. ++|++.||+++++ +.|+|||+|||+.++
T Consensus 213 ~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~~-~~g~i~vd~~~~t-~~~~vya~GD~~~~~ 290 (332)
T 3lzw_A 213 AELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDI-EKNSIVVKSTMET-NIEGFFAAGDICTYE 290 (332)
T ss_dssp EEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGGGSSCCE-ETTEEECCTTSBC-SSTTEEECGGGEECT
T ss_pred eEEecCCceEEEEEEecCCCceEEEECCEEEEeeccCCCchHHhhcCccc-cCCeEEeCCCCce-ecCCEEEccceecCC
Confidence 9998753 77765 467999999999999997 6788888887 6799999999998 899999999999752
Q ss_pred cCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 161 ESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 161 ~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
..|+++..|..||+.+|+||...+.
T Consensus 291 ------~~~~~~~~A~~~g~~aa~~i~~~l~ 315 (332)
T 3lzw_A 291 ------GKVNLIASGFGEAPTAVNNAKAYMD 315 (332)
T ss_dssp ------TCCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred ------CCcceEeeehhhHHHHHHHHHHhhC
Confidence 2388999999999999999999886
No 69
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.87 E-value=1e-21 Score=173.71 Aligned_cols=151 Identities=17% Similarity=0.201 Sum_probs=125.0
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhC-CCEEEeC-
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKS-GVRLVRG- 88 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~-gV~v~~~- 88 (283)
...++++|||+|++|+|+|..|++.+ .+|+++++. .+++ ...+.+.+.+. ||+++++
T Consensus 171 ~~~~~v~vvG~G~~g~e~a~~l~~~g--------------~~v~~v~~~~~~~~------~~~~~~~l~~~~gv~i~~~~ 230 (338)
T 3itj_A 171 FRNKPLAVIGGGDSACEEAQFLTKYG--------------SKVFMLVRKDHLRA------STIMQKRAEKNEKIEILYNT 230 (338)
T ss_dssp GTTSEEEEECSSHHHHHHHHHHTTTS--------------SEEEEECSSSSCCS------CHHHHHHHHHCTTEEEECSE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcC--------------CEEEEEEcCCccCC------CHHHHHHHHhcCCeEEeecc
Confidence 35689999999999999999999876 899999997 5544 23445556555 9999999
Q ss_pred ceEEEeCCe-----EEEcC-----CcEEEeeEEEEcCCCCCchhhhccCCCCCCCCcccc-CCCcccCCCCCEEEecccc
Q 023375 89 IVKDVDSQK-----LILND-----GTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGI-DEWLRVPSVQDVFAVGDCS 157 (283)
Q Consensus 89 ~V~~v~~~~-----v~~~~-----g~~i~~d~vi~a~G~~~~~~~~~~~l~~~~~g~i~V-d~~l~~~~~~~VfaiGD~a 157 (283)
+|++++.+. |++++ ++++++|.||+|+|.+|+..+...+++++++|++.| |+++++ +.|+|||+|||+
T Consensus 231 ~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~v~~~~~~t-~~~~vya~GD~~ 309 (338)
T 3itj_A 231 VALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAGQVDTDEAGYIKTVPGSSLT-SVPGFFAAGDVQ 309 (338)
T ss_dssp EEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGGBTTBCBCTTSCBCCCTTSSBC-SSTTEEECGGGG
T ss_pred eeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHhhCceEecCCCcEEEcCccccc-CCCCEEEeeccC
Confidence 899997653 77765 467999999999999999544344888888999985 788887 899999999999
Q ss_pred ccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 158 GYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 158 ~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
. ..|+++..|+.||+.+|.||.+.+.
T Consensus 310 ~--------~~~~~~~~A~~~g~~aa~~i~~~l~ 335 (338)
T 3itj_A 310 D--------SKYRQAITSAGSGCMAALDAEKYLT 335 (338)
T ss_dssp C--------SSCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred C--------CCccceeeehhhhHHHHHHHHHHHh
Confidence 5 2378899999999999999999886
No 70
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.86 E-value=5.3e-21 Score=169.20 Aligned_cols=153 Identities=19% Similarity=0.198 Sum_probs=122.8
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
...++|+|||+|++|+|+|..|++.+ .+|+++++...+. ..+.+ ..+.+++.||+++++ +|
T Consensus 157 ~~~~~v~VvG~G~~g~e~A~~l~~~g--------------~~V~lv~~~~~~~-~~~~~---~~~~~~~~gv~i~~~~~v 218 (333)
T 1vdc_A 157 FRNKPLAVIGGGDSAMEEANFLTKYG--------------SKVYIIHRRDAFR-ASKIM---QQRALSNPKIDVIWNSSV 218 (333)
T ss_dssp GTTSEEEEECCSHHHHHHHHHHTTTS--------------SEEEEECSSSSCC-SCHHH---HHHHHTCTTEEEECSEEE
T ss_pred cCCCeEEEECCChHHHHHHHHHHhcC--------------CeEEEEecCCcCC-ccHHH---HHHHHhCCCeeEecCCce
Confidence 45689999999999999999998876 8999999873322 12222 224467889999999 89
Q ss_pred EEEeCCe-------EEEc---CC--cEEEeeEEEEcCCCCCchhhhccCCCCCCCCccccCCCc-ccCCCCCEEEecccc
Q 023375 91 KDVDSQK-------LILN---DG--TEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWL-RVPSVQDVFAVGDCS 157 (283)
Q Consensus 91 ~~v~~~~-------v~~~---~g--~~i~~d~vi~a~G~~~~~~~~~~~l~~~~~g~i~Vd~~l-~~~~~~~VfaiGD~a 157 (283)
++++.+. |.+. +| +++++|.||+|+|.+|+..+.+.+++.+++|++.||+++ ++ +.|+|||+|||+
T Consensus 219 ~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~~~~t-~~~~vya~GD~~ 297 (333)
T 1vdc_A 219 VEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLDGGVELDSDGYVVTKPGTTQT-SVPGVFAAGDVQ 297 (333)
T ss_dssp EEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTSSCBCTTSCBCCCTTSCBC-SSTTEEECGGGG
T ss_pred EEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHhhccccccCCCCEEechhhccc-CCCCEEEeeecc
Confidence 9987542 7775 45 579999999999999995333357777888999999874 65 899999999999
Q ss_pred ccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 158 GYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 158 ~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
.. .++++..|+.||+.+|.||.+.+.
T Consensus 298 ~~--------~~~~~~~A~~~g~~aa~~i~~~l~ 323 (333)
T 1vdc_A 298 DK--------KYRQAITAAGTGCMAALDAEHYLQ 323 (333)
T ss_dssp CS--------SCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CC--------CchhHHHHHHhHHHHHHHHHHHHH
Confidence 63 257899999999999999999886
No 71
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.86 E-value=4.3e-21 Score=170.28 Aligned_cols=150 Identities=24% Similarity=0.283 Sum_probs=122.2
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
..++|+|||+|++|+|+|..|++.+ .+|+++++. .+.. .+.+ ..+.+++.||+++++ +|
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g--------------~~V~l~~~~~~~~~--~~~~---~~~~~~~~gV~v~~~~~v 214 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFA--------------RSVTLVHRRDEFRA--SKIM---LDRARNNDKIRFLTNHTV 214 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTC--------------SEEEEECSSSSCSS--CTTH---HHHHHHCTTEEEECSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhC--------------CeEEEEEcCCcCCc--cHHH---HHHHhccCCcEEEeCcee
Confidence 5689999999999999999998876 899999987 4432 1222 124456789999999 89
Q ss_pred EEEeCCe----EEEc---CC--cEEEeeEEEEcCCCCCch-hhhccCCCCCCCCccccCCCc-ccCCCCCEEEecccccc
Q 023375 91 KDVDSQK----LILN---DG--TEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWL-RVPSVQDVFAVGDCSGY 159 (283)
Q Consensus 91 ~~v~~~~----v~~~---~g--~~i~~d~vi~a~G~~~~~-~~~~~~l~~~~~g~i~Vd~~l-~~~~~~~VfaiGD~a~~ 159 (283)
++++.+. |.++ +| +++++|.||||+|.+|+. ++. .+++.+++|++.||+++ ++ +.|+|||+|||+..
T Consensus 215 ~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l~~~~~G~i~vd~~~~~t-~~~~iya~GD~~~~ 292 (335)
T 2a87_A 215 VAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVR-EAIDVDPDGYVLVQGRTTST-SLPGVFAAGDLVDR 292 (335)
T ss_dssp EEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTTB-TTBCBCTTSCBCCSTTSSBC-SSTTEEECGGGTCC
T ss_pred EEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCccChhHhh-cccccCCCccEEeCCCCCcc-CCCCEEEeeecCCc
Confidence 9998764 7775 45 579999999999999994 443 56777888999999864 55 89999999999952
Q ss_pred CcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 160 LESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 160 ~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
.++++..|..||+.+|.||.+.+.
T Consensus 293 --------~~~~~~~A~~~g~~aA~~i~~~l~ 316 (335)
T 2a87_A 293 --------TYRQAVTAAGSGCAAAIDAERWLA 316 (335)
T ss_dssp --------SCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------cHHHHHHHHHhHHHHHHHHHHHhh
Confidence 267899999999999999998886
No 72
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.85 E-value=9.7e-21 Score=169.70 Aligned_cols=159 Identities=13% Similarity=0.151 Sum_probs=126.1
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCC-------CCCHHHHHHHHHHHHhCC-C
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-------SFDDRLRHYATTQLSKSG-V 83 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~-------~~~~~~~~~~~~~l~~~g-V 83 (283)
..++|+|||||++|+|+|.+|++.+ .+|+++++. .+++ .+++.+.+.+.+.|++.| |
T Consensus 165 ~~~~vvVvG~G~~g~e~a~~l~~~g--------------~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v 230 (369)
T 3d1c_A 165 NKGQYVVIGGNESGFDAAYQLAKNG--------------SDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARI 230 (369)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECC----------CTTSCCHHHHHHHHHHHHTTCCE
T ss_pred CCCEEEEECCCcCHHHHHHHHHhcC--------------CeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcE
Confidence 4579999999999999999999887 899999987 5553 266788899999999997 9
Q ss_pred EEEeC-ceEEE--eCC--eEEEcCCcEEE-eeEEEEcCCCCCch-hhhccCCCCCCCCccccCCCcccCCCCCEEEeccc
Q 023375 84 RLVRG-IVKDV--DSQ--KLILNDGTEVP-YGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDC 156 (283)
Q Consensus 84 ~v~~~-~V~~v--~~~--~v~~~~g~~i~-~d~vi~a~G~~~~~-~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~ 156 (283)
+++++ +|+++ +++ .|++.+|+++. +|.+|||+|.+|+. ++.+.+++ +++|++.||++++.+++|+||++|||
T Consensus 231 ~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~~~~~~-~~~g~i~v~~~~~~t~~~~v~a~GD~ 309 (369)
T 3d1c_A 231 EMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDATKNPIVQQLFV-TTNQDIKLTTHDESTRYPNIFMIGAT 309 (369)
T ss_dssp EEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBCGGGSHHHHHHSC-CTTSCCCBCTTSBBSSSTTEEECSTT
T ss_pred EEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccCCccchhhhhhcc-CCCCCEEechhhcccCCCCeEEeccc
Confidence 99999 89999 445 46778888775 59999999999995 66655566 67899999987655599999999999
Q ss_pred cccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 157 SGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 157 a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
+..+.. .......|.+||+++|++|...+.
T Consensus 310 ~~~~~~-----~~~~~~~~~~~a~~~a~~l~~~~~ 339 (369)
T 3d1c_A 310 VENDNA-----KLCYIYKFRARFAVLAHLLTQREG 339 (369)
T ss_dssp CCCSSC-----CCCSHHHHGGGHHHHHHHHHHHTT
T ss_pred cccCCe-----eEEEEehhhHHHHHHHHHHhcccC
Confidence 975431 122345678899999999987664
No 73
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.85 E-value=8.3e-21 Score=175.54 Aligned_cols=152 Identities=18% Similarity=0.219 Sum_probs=123.6
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CC-CCCCCHHHHHHHHHHHHhCCCEEEeC-
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EI-LSSFDDRLRHYATTQLSKSGVRLVRG- 88 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~-l~~~~~~~~~~~~~~l~~~gV~v~~~- 88 (283)
...++|+|||||.+|+|+|..+.+.+. .+|+++++. .. +|..+.+ .+.+++.||+++++
T Consensus 262 ~~gk~VvVIGgG~~a~d~A~~~~r~Ga-------------~~Vtiv~r~~~~~~p~~~~e-----~~~~~~~Gv~~~~~~ 323 (456)
T 2vdc_G 262 AAGKHVVVLGGGDTAMDCVRTAIRQGA-------------TSVKCLYRRDRKNMPGSQRE-----VAHAEEEGVEFIWQA 323 (456)
T ss_dssp CCCSEEEEECSSHHHHHHHHHHHHTTC-------------SEEEEECSSCSTTCSSCHHH-----HHHHHHTTCEEECCS
T ss_pred cCCCEEEEECCChhHHHHHHHHHHcCC-------------CEEEEEEeCCccCCCCCHHH-----HHHHHHCCCEEEeCC
Confidence 356899999999999999999988761 379999987 44 6665543 34577889999988
Q ss_pred ceEEEeCCe----EEEc------------------CC--cEEEeeEEEEcCCCCCch---hhhccCCCCCCCCccccCCC
Q 023375 89 IVKDVDSQK----LILN------------------DG--TEVPYGLLVWSTGVGPST---LVKSLDLPKSPGGRIGIDEW 141 (283)
Q Consensus 89 ~V~~v~~~~----v~~~------------------~g--~~i~~d~vi~a~G~~~~~---~~~~~~l~~~~~g~i~Vd~~ 141 (283)
.++++.+++ |++. +| +++++|+||+|+|..|++ +++.++++++++|++.||++
T Consensus 324 ~~~~i~~~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~ 403 (456)
T 2vdc_G 324 APEGFTGDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHR 403 (456)
T ss_dssp SSCCEEEEEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTT
T ss_pred CceEEeCCCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCeeECCCCCEEECCC
Confidence 677765432 2221 23 478999999999999974 67888999999999999987
Q ss_pred -cccCCCCCEEEeccccccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 142 -LRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 142 -l~~~~~~~VfaiGD~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
+++ +.|+|||+|||+.. |.++..|+.||+.+|++|...+.
T Consensus 404 ~~~T-s~~~VfA~GD~~~g---------~~~v~~A~~~G~~aA~~i~~~L~ 444 (456)
T 2vdc_G 404 TKMT-NMDGVFAAGDIVRG---------ASLVVWAIRDGRDAAEGIHAYAK 444 (456)
T ss_dssp TCBC-SSTTEEECGGGGSS---------CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcC-CCCCEEEeccccCC---------chHHHHHHHHHHHHHHHHHHHhh
Confidence 997 89999999999852 67899999999999999999886
No 74
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.85 E-value=8.5e-21 Score=168.66 Aligned_cols=156 Identities=22% Similarity=0.320 Sum_probs=120.8
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC--CCCCCC--CHHHHHHHHHHHH--------
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN--EILSSF--DDRLRHYATTQLS-------- 79 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~--~~l~~~--~~~~~~~~~~~l~-------- 79 (283)
...++|+|||||++|+|+|.+|++.+ +|+++++. .++|.. +..+...+.+.+.
T Consensus 161 ~~~~~v~VvG~G~~g~e~a~~l~~~~---------------~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (357)
T 4a9w_A 161 FAGMRVAIIGGGNSGAQILAEVSTVA---------------ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREP 225 (357)
T ss_dssp GTTSEEEEECCSHHHHHHHHHHTTTS---------------EEEEECSSCCCBCCTTCCTHHHHTC--------------
T ss_pred cCCCEEEEECCCcCHHHHHHHHHhhC---------------CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCC
Confidence 35689999999999999999998763 59999875 445532 3444433333332
Q ss_pred --------------------hCCCEEEeC-ceEEEeCCeEEEcCCcEEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccc
Q 023375 80 --------------------KSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIG 137 (283)
Q Consensus 80 --------------------~~gV~v~~~-~V~~v~~~~v~~~~g~~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~ 137 (283)
+.|+ +... .+++++.+.+.+++|+++++|.||||+|.+|+ ++++.++++ +++|++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~-~~~G~i~ 303 (357)
T 4a9w_A 226 DLPPGGFGDIVMVPPVLDARARGV-LAAVPPPARFSPTGMQWADGTERAFDAVIWCTGFRPALSHLKGLDLV-TPQGQVE 303 (357)
T ss_dssp --------CBCCCHHHHHHHHTTC-CCEECCCSEEETTEEECTTSCEEECSEEEECCCBCCCCGGGTTTTCB-CTTSCBC
T ss_pred CcccccccCcccChhHHHHHhcCc-eEEecCcceEeCCeeEECCCCEecCCEEEECCCcCCCCcccCccccc-CCCCCcc
Confidence 4455 4444 68889999999999999999999999999999 888888998 7889999
Q ss_pred cCCC--cccCCCCCEEEeccccccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 138 IDEW--LRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 138 Vd~~--l~~~~~~~VfaiGD~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
||++ +++ +.|+|||+|||... .+.++++..|.+||+.+|+||.+.++
T Consensus 304 vd~~~l~~t-~~~~vya~Gd~d~~------~~~~~~~~~A~~~g~~~a~~i~~~l~ 352 (357)
T 4a9w_A 304 VDGSGLRAL-AVPSVWLLGYGDWN------GMASATLIGVTRYAREAVRQVTAYCA 352 (357)
T ss_dssp BCTTSCBBS-SCTTEEECSSCGGG------STTCSSTTTHHHHHHHHHHHHHHHTC
T ss_pred ccCCcccCC-CCCCeEEecccccc------ccchhhhhhhHHHHHHHHHHHHHHHH
Confidence 9998 666 99999999954221 12367778899999999999999886
No 75
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.84 E-value=1.6e-20 Score=164.87 Aligned_cols=151 Identities=18% Similarity=0.194 Sum_probs=117.0
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-c
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-I 89 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~ 89 (283)
.+.++|+|||||++|+|+|..|++++ .+|+++++. ++++.. ....+.+++.++..... .
T Consensus 143 ~~~k~vvViGgG~ig~E~A~~l~~~g--------------~~Vtlv~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 203 (312)
T 4gcm_A 143 FKNKRLFVIGGGDSAVEEGTFLTKFA--------------DKVTIVHRRDELRAQR-----ILQDRAFKNDKIDFIWSHT 203 (312)
T ss_dssp GTTCEEEEECCSHHHHHHHHHHTTTC--------------SEEEEECSSSSCCSCH-----HHHHHHHHCTTEEEECSEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcC--------------CEEEEEecccccCcch-----hHHHHHHHhcCcceeeecc
Confidence 35689999999999999999999887 899999997 666532 12345567778887766 4
Q ss_pred eEEEe--CC---e--EEE---cCCcEEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEeccccc
Q 023375 90 VKDVD--SQ---K--LIL---NDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSG 158 (283)
Q Consensus 90 V~~v~--~~---~--v~~---~~g~~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 158 (283)
+..+. .. . ... .++..+++|.|++++|..|+ .+...+++. +++|+|.||+++|| +.|+|||+|||+.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~g~~-~~~G~I~vd~~~~T-s~pgIyA~GDv~~ 281 (312)
T 4gcm_A 204 LKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGIT-NDVGYIVTKDDMTT-SVPGIFAAGDVRD 281 (312)
T ss_dssp EEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGGGGTCB-CTTSCBCCCTTSBC-SSTTEEECSTTBS
T ss_pred eeeeeccccccccceeeeecCCceeEEeeeeEEeecCCCcCchhHHhccee-cCCCeEeeCCCCcc-CCCCEEEEeecCC
Confidence 33332 11 1 111 23457899999999999998 466666764 56799999999999 9999999999985
Q ss_pred cCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 159 YLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 159 ~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
. .++++..|+.||+.||.||.+++.
T Consensus 282 ~--------~~~~~~~A~~~G~~AA~~i~~~L~ 306 (312)
T 4gcm_A 282 K--------GLRQIVTATGDGSIAAQSAAEYIE 306 (312)
T ss_dssp C--------SCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred C--------cchHHHHHHHHHHHHHHHHHHHHH
Confidence 2 267889999999999999998875
No 76
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.83 E-value=7.2e-20 Score=172.11 Aligned_cols=150 Identities=25% Similarity=0.325 Sum_probs=124.7
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHh-CCCEEEeC-
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSK-SGVRLVRG- 88 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~-~gV~v~~~- 88 (283)
...++|+|||||++|+|+|..|+..+ .+|+++++. .+++ + ..+.+.|++ .||+++++
T Consensus 353 ~~~k~V~ViGgG~~g~E~A~~L~~~g--------------~~Vtlv~~~~~l~~--~----~~l~~~l~~~~gV~v~~~~ 412 (521)
T 1hyu_A 353 FKGKRVAVIGGGNSGVEAAIDLAGIV--------------EHVTLLEFAPEMKA--D----QVLQDKVRSLKNVDIILNA 412 (521)
T ss_dssp GBTSEEEEECCSHHHHHHHHHHHHHB--------------SEEEEECSSSSCCS--C----HHHHHHHTTCTTEEEECSE
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhhC--------------CEEEEEEeCcccCc--C----HHHHHHHhcCCCcEEEeCC
Confidence 45689999999999999999999887 899999987 4443 2 345666777 69999999
Q ss_pred ceEEEeCC-----eEEEcC---Cc--EEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEecccc
Q 023375 89 IVKDVDSQ-----KLILND---GT--EVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCS 157 (283)
Q Consensus 89 ~V~~v~~~-----~v~~~~---g~--~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a 157 (283)
+++++..+ ++.+.+ |+ ++++|.|++++|.+|+ +++.. .++++++|++.||+++++ +.|+|||+|||+
T Consensus 413 ~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l~~-~l~~~~~G~I~Vd~~~~t-s~p~VfA~GD~~ 490 (521)
T 1hyu_A 413 QTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEG-ALERNRMGEIIIDAKCET-SVKGVFAAGDCT 490 (521)
T ss_dssp EEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGGTT-TSCBCTTSCBCCCTTCBC-SSTTEEECSTTB
T ss_pred EEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHHhh-hhccCCCCcEEeCCCCCC-CCCCEEEeeccc
Confidence 89999754 356653 53 6899999999999998 46665 477788899999999998 999999999999
Q ss_pred ccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 158 GYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 158 ~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
.. .++++..|+.||+.+|.+|...+.
T Consensus 491 ~~--------~~~~~~~A~~~g~~aa~~i~~~L~ 516 (521)
T 1hyu_A 491 TV--------PYKQIIIATGEGAKASLSAFDYLI 516 (521)
T ss_dssp CC--------SSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CC--------CcceeeehHHhHHHHHHHHHHHHH
Confidence 63 246889999999999999998875
No 77
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.83 E-value=4.5e-20 Score=161.75 Aligned_cols=151 Identities=19% Similarity=0.237 Sum_probs=116.2
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-c
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-I 89 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~ 89 (283)
.+.++++|||||++|+|+|..|++++ .+|+++++. .... .+. ...+.+...+++.+.. .
T Consensus 150 ~~~~~vvViGgG~ig~e~A~~l~~~G--------------~~Vt~v~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~ 210 (314)
T 4a5l_A 150 FRNKVLMVVGGGDAAMEEALHLTKYG--------------SKVIILHRRDAFRA--SKT---MQERVLNHPKIEVIWNSE 210 (314)
T ss_dssp GTTSEEEEECSSHHHHHHHHHHTTTS--------------SEEEEECSSSSCCS--CHH---HHHHHHTCTTEEEECSEE
T ss_pred cCCCeEEEECCChHHHHHHHHHHHhC--------------Ceeeeecccccccc--cch---hhhhhhcccceeeEeeee
Confidence 34689999999999999999999887 899999986 4332 222 2344566678888877 5
Q ss_pred eEEEeCC-----eEEE-----cCCcEEEeeEEEEcCCCCCchhhhccCCCCCCCCccccCCCcccCCCCCEEEecccccc
Q 023375 90 VKDVDSQ-----KLIL-----NDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGY 159 (283)
Q Consensus 90 V~~v~~~-----~v~~-----~~g~~i~~d~vi~a~G~~~~~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~ 159 (283)
+.++... .+.+ .+++++++|.|++++|.+|+.-+-...++.+++|.+ ||+++|| +.|+|||+|||+..
T Consensus 211 ~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l~~~~~~~~~G~i-v~~~~~T-s~pgIyA~GDv~~~ 288 (314)
T 4a5l_A 211 LVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQVKTADDGYI-LTEGPKT-SVDGVFACGDVCDR 288 (314)
T ss_dssp EEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTSSCBCTTSCB-CCBTTBC-SSTTEEECSTTTCS
T ss_pred eEEEEeeeeccceeEEeecccccceeeccccceEecccccChhHhcccceEcCCeeE-eCCCCcc-CCCCEEEEEeccCC
Confidence 6666432 2333 245689999999999999995333445667777866 8899999 99999999999952
Q ss_pred CcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 160 LESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 160 ~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
..+++..|+.||+.||.++.++++
T Consensus 289 --------~~~~~~~A~~~G~~AA~~~~~yL~ 312 (314)
T 4a5l_A 289 --------VYRQAIVAAGSGCMAALSCEKWLQ 312 (314)
T ss_dssp --------SCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------cchHHHHHHHHHHHHHHHHHHHHh
Confidence 245788899999999999998875
No 78
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.83 E-value=7.1e-20 Score=160.42 Aligned_cols=149 Identities=12% Similarity=0.185 Sum_probs=121.0
Q ss_pred ccCeEEEEccCcH-HHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeCceE
Q 023375 13 RLLHCVVVGGGPT-GVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVK 91 (283)
Q Consensus 13 ~~~~vvVvGgG~~-Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~ 91 (283)
+.++++|||||.. ++|+|..+...+ .+|+++++...+. ..+.+.|++.|++++.+.++
T Consensus 145 ~~~~~~VIggG~~~~~e~a~~~~~~~--------------~~v~i~~~~~~~~-------~~~~~~l~~~g~~~~~~~v~ 203 (304)
T 4fk1_A 145 KDQPLIIISENEDHTLHMTKLVYNWS--------------TDLVIATNGNELS-------QTIMDELSNKNIPVITESIR 203 (304)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHTTTC--------------SCEEEECSSCCCC-------HHHHHHHHTTTCCEECSCEE
T ss_pred cCCceeeecCCCchhhhHHHHHHhCC--------------ceEEEEeccccch-------hhhhhhhhccceeEeeeeEE
Confidence 4567888888865 567777776665 8899998764322 23456788899999988777
Q ss_pred EEeCC-----eEEEcCCcEEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcCCCC
Q 023375 92 DVDSQ-----KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGK 165 (283)
Q Consensus 92 ~v~~~-----~v~~~~g~~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~~~ 165 (283)
.+..+ .|++++|+++++|.+++++|.+|+ +++.+++++++++|+|.||+++|| +.|+|||+|||+..
T Consensus 204 ~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~~~~~g~~~~~~G~I~vd~~~~T-s~p~IyA~GDv~~~------ 276 (304)
T 4fk1_A 204 TLQGEGGYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVIDDFGRT-SEKNIYLAGETTTQ------ 276 (304)
T ss_dssp EEESGGGCCCEEEETTSCEECCCEEEECCEEECSSCHHHHTTCCCCTTSSSCSSTTCBC-SSTTEEECSHHHHT------
T ss_pred EeecCCCeeeeeeccccceeeecceeeeeccccCChhhhhcCeEECCCCCEEECcCCcc-CCCCEEEEeccCCC------
Confidence 77654 588899999999988888776655 788889999999999999999999 99999999999952
Q ss_pred cCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 166 TVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 166 ~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
.+.++..|+.||+.||.+|.+.+.
T Consensus 277 --~~~~~~~A~~~G~~AA~~i~~~L~ 300 (304)
T 4fk1_A 277 --GPSSLIIAASQGNKAAIAINSDIT 300 (304)
T ss_dssp --SCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --cchHHHHHHHHHHHHHHHHHHHHh
Confidence 266788899999999999998886
No 79
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.78 E-value=3.3e-18 Score=172.26 Aligned_cols=150 Identities=13% Similarity=0.083 Sum_probs=121.7
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC--CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN--EILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~--~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
.++|+|||||++|+|+|..+.+++. .+|+++++. .+++.+++++ +.+++.||+++.+ .+
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~-------------~~Vtvv~r~~~~~~~~~~~e~-----~~~~~~Gv~~~~~~~~ 393 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGA-------------RRVFLVFRKGFVNIRAVPEEV-----ELAKEEKCEFLPFLSP 393 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTC-------------SEEEEECSSCGGGCCSCHHHH-----HHHHHTTCEEECSEEE
T ss_pred CCcEEEECCChHHHHHHHHHHHcCC-------------CEEEEEEecChhhCCCCHHHH-----HHHHHcCCEEEeCCCc
Confidence 4599999999999999999998761 389999986 4677776654 4577889999988 78
Q ss_pred EEEeC--Ce---EEEc------CC---------cEEEeeEEEEcCCCCCc--hhhhc-cCCCCCCCCccccCC-CcccCC
Q 023375 91 KDVDS--QK---LILN------DG---------TEVPYGLLVWSTGVGPS--TLVKS-LDLPKSPGGRIGIDE-WLRVPS 146 (283)
Q Consensus 91 ~~v~~--~~---v~~~------~g---------~~i~~d~vi~a~G~~~~--~~~~~-~~l~~~~~g~i~Vd~-~l~~~~ 146 (283)
+++.. +. |++. +| +++++|.||+|+|.+|+ .+... .+++++++|+|.||+ ++|| +
T Consensus 394 ~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~T-s 472 (1025)
T 1gte_A 394 RKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQT-S 472 (1025)
T ss_dssp EEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCBC-S
T ss_pred eEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCcc-C
Confidence 77753 32 3332 22 36899999999999864 45555 488888899999997 8998 8
Q ss_pred CCCEEEeccccccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 147 VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 147 ~~~VfaiGD~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
.|+|||+|||+.. |.++..|+.||+.+|.+|...+.
T Consensus 473 ~~~VfA~GD~~~~---------~~~~~~A~~~G~~aA~~i~~~L~ 508 (1025)
T 1gte_A 473 EPWVFAGGDIVGM---------ANTTVESVNDGKQASWYIHKYIQ 508 (1025)
T ss_dssp STTEEECSGGGCS---------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeCCCCCC---------chHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999952 67899999999999999998775
No 80
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.76 E-value=2.9e-18 Score=158.59 Aligned_cols=168 Identities=13% Similarity=0.104 Sum_probs=120.8
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcC-----CCC--CccEEEEEeCC-CCCCCCCH----------------
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYS-----HVK--DYIHVTLIEAN-EILSSFDD---------------- 68 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~-----~~~--~~~~V~li~~~-~~l~~~~~---------------- 68 (283)
+.++|+|||+|++|+|+|.+|++....-...+++ .++ ...+|+++++. .+.+.+.+
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~ 225 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVI 225 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCTTEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcCCCceeee
Confidence 4689999999999999999999753211000000 011 11599999986 44333221
Q ss_pred ---H------------------HHHHHHHHHHh------CCCEEEeC-ceEEEeCC----eEEEc---------------
Q 023375 69 ---R------------------LRHYATTQLSK------SGVRLVRG-IVKDVDSQ----KLILN--------------- 101 (283)
Q Consensus 69 ---~------------------~~~~~~~~l~~------~gV~v~~~-~V~~v~~~----~v~~~--------------- 101 (283)
+ +.+.+.+.+.+ +||+++++ .+.+|.++ .|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~ 305 (456)
T 1lqt_A 226 DPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAK 305 (456)
T ss_dssp CGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEE
T ss_pred ChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCccccccc
Confidence 1 12344455555 79999999 89999765 36654
Q ss_pred -CC--cEEEeeEEEEcCCCCCchhhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcCCCCcCCCcchHHHHHH
Q 023375 102 -DG--TEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 178 (283)
Q Consensus 102 -~g--~~i~~d~vi~a~G~~~~~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~~~~~~p~~~~~A~~q 178 (283)
+| +++++|+||+++|.+|+++ .+++.+++|++.||+++|+++.|+|||+|||+..+ ......|+.|
T Consensus 306 ~~g~~~~i~~d~vi~a~G~~p~~l---~gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp--------~~~i~~a~~~ 374 (456)
T 1lqt_A 306 DTGEREELPAQLVVRSVGYRGVPT---PGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGP--------TGVIGTNKKD 374 (456)
T ss_dssp EEEEEEEEECSEEEECSCEECCCC---TTSCCBTTTTBCCEETTEETTCSSEEECTHHHHCS--------CSCTTHHHHH
T ss_pred CCCceEEEEcCEEEEccccccCCC---CCCcccCCCCeeECCCCcCCCCCCEEEEeccCCCC--------chhHHHHHHH
Confidence 34 4699999999999999984 46777888899999999965899999999999621 2234579999
Q ss_pred HHHHHHHHHHHhh
Q 023375 179 GKYLFSLLNRIGK 191 (283)
Q Consensus 179 g~~~a~~i~~~~~ 191 (283)
|..+|.||...+.
T Consensus 375 g~~~a~~i~~~l~ 387 (456)
T 1lqt_A 375 AQDTVDTLIKNLG 387 (456)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988775
No 81
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.76 E-value=4.2e-18 Score=157.67 Aligned_cols=167 Identities=14% Similarity=0.098 Sum_probs=118.3
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHh-hcC-----CC-CCcc-EEEEEeCC-CC--------------CCC----
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQ-RYS-----HV-KDYI-HVTLIEAN-EI--------------LSS---- 65 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~-~~~-----~~-~~~~-~V~li~~~-~~--------------l~~---- 65 (283)
..++|+|||||++|+|+|..|++.... +.+ +.+ .+ +.+. +|+++++. .+ +|.
T Consensus 144 ~~~~vvVIGgG~~g~e~A~~L~~~~~~-l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~ 222 (460)
T 1cjc_A 144 SCDTAVILGQGNVALDVARILLTPPDH-LEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPM 222 (460)
T ss_dssp TSSEEEEESCSHHHHHHHHHHHSCGGG-GTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHhhchhh-hccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCceeE
Confidence 468999999999999999999952210 000 000 00 1124 89999986 33 231
Q ss_pred ---------------CCHH---HHHHHHHHHHh--------------CCCEEEeC-ceEEEeCC-------eEEEc----
Q 023375 66 ---------------FDDR---LRHYATTQLSK--------------SGVRLVRG-IVKDVDSQ-------KLILN---- 101 (283)
Q Consensus 66 ---------------~~~~---~~~~~~~~l~~--------------~gV~v~~~-~V~~v~~~-------~v~~~---- 101 (283)
++.. +.+.+.+.+.+ +||+++++ .+.+|.++ .|++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l 302 (460)
T 1cjc_A 223 LDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRL 302 (460)
T ss_dssp CCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEE
T ss_pred echhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEE
Confidence 1111 22333444545 88999999 78888643 25443
Q ss_pred -----------CC--cEEEeeEEEEcCCCCCchhhhccCC-CCCCCCccccCCCcccCCCCCEEEeccccccCcCCCCcC
Q 023375 102 -----------DG--TEVPYGLLVWSTGVGPSTLVKSLDL-PKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTV 167 (283)
Q Consensus 102 -----------~g--~~i~~d~vi~a~G~~~~~~~~~~~l-~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~~~~~ 167 (283)
+| +++++|+||+++|.+|+++ .++ +.+++|.+.||+++|+.+.|+|||+|||+..
T Consensus 303 ~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~l---~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~~g-------- 371 (460)
T 1cjc_A 303 EGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRPI---DPSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVKRG-------- 371 (460)
T ss_dssp ESSGGGCEEEEEEEEEEEECSEEEECCCEECCCC---CTTSCCBTTTTBCCEETTEETTCTTEEECTHHHHC--------
T ss_pred ccccCCCcccCCCceEEEEcCEEEECCCCCCCCC---CCCcccccCCCeeECCCCcCcCCCCEEEEEeCCcC--------
Confidence 34 5799999999999999974 577 7888889999999999447999999999952
Q ss_pred CCcchHHHHHHHHHHHHHHHHHhh
Q 023375 168 LPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 168 ~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
.......|+.||+.+|.||...+.
T Consensus 372 ~~~~i~~a~~~g~~aa~~i~~~l~ 395 (460)
T 1cjc_A 372 PTGVITTTMTDSFLTGQILLQDLK 395 (460)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHH
Confidence 123466899999999999998876
No 82
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.76 E-value=5.3e-18 Score=143.03 Aligned_cols=152 Identities=16% Similarity=0.128 Sum_probs=107.6
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCC-----------------CC-------CCHH
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL-----------------SS-------FDDR 69 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l-----------------~~-------~~~~ 69 (283)
.+|+|||||++|+++|..|++.+ .+|++||+. ... .. ....
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g--------------~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~ 69 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKG--------------VRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWA 69 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHH
Confidence 57999999999999999999887 899999986 110 00 1236
Q ss_pred HHHHHHHHHHhC-CCEEEeCceEEEeC--C---eEEEcCCcEEEeeEEEEcCCCCCchh---------------------
Q 023375 70 LRHYATTQLSKS-GVRLVRGIVKDVDS--Q---KLILNDGTEVPYGLLVWSTGVGPSTL--------------------- 122 (283)
Q Consensus 70 ~~~~~~~~l~~~-gV~v~~~~V~~v~~--~---~v~~~~g~~i~~d~vi~a~G~~~~~~--------------------- 122 (283)
+...+.+.+++. |++++..+|+++.. + .|.+.+|+++++|.||+|+|..++..
T Consensus 70 ~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l 149 (232)
T 2cul_A 70 FHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDL 149 (232)
T ss_dssp HHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHH
T ss_pred HHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhh
Confidence 677788888887 99999558888753 3 36677888899999999999954421
Q ss_pred ---hhccCCCCCCCC--------c-------cccC------CCcccCCCCCEEEeccccccCcCCCCcCCCcchHHHHHH
Q 023375 123 ---VKSLDLPKSPGG--------R-------IGID------EWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 178 (283)
Q Consensus 123 ---~~~~~l~~~~~g--------~-------i~Vd------~~l~~~~~~~VfaiGD~a~~~~~~~~~~~p~~~~~A~~q 178 (283)
+.+.++++.+.. . ..+. ..+..+++|+||++|||+ . ..+.+.|++|
T Consensus 150 ~~~l~~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~---------~g~~~~~~~~ 219 (232)
T 2cul_A 150 LEDLSRLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-R---------EGDYARMSEE 219 (232)
T ss_dssp HHHHHHTTCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-S---------CCCHHHHHHH
T ss_pred CHHHHhCCCeEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-c---------CccHHHHHHH
Confidence 112233222100 0 0000 012212899999999999 5 2278889999
Q ss_pred HHHHHHHHHHHh
Q 023375 179 GKYLFSLLNRIG 190 (283)
Q Consensus 179 g~~~a~~i~~~~ 190 (283)
|+.+|.+|...+
T Consensus 220 g~~~a~~i~~~l 231 (232)
T 2cul_A 220 GKRLAEHLLHEL 231 (232)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhhc
Confidence 999999998754
No 83
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.76 E-value=9.5e-18 Score=155.50 Aligned_cols=138 Identities=10% Similarity=0.042 Sum_probs=112.1
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeCce
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGIV 90 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V 90 (283)
...++|+|||||++|+|+|.+|++.+ .+|+++++. .+++..- ..||+++ ..|
T Consensus 195 ~~~k~VvVVG~G~sg~eiA~~l~~~g--------------~~V~li~~~~~~~~~~~------------~~~V~~~-~~V 247 (464)
T 2xve_A 195 FKDKTVLLVGSSYSAEDIGSQCYKYG--------------AKKLISCYRTAPMGYKW------------PENWDER-PNL 247 (464)
T ss_dssp GTTSEEEEECCSTTHHHHHHHHHHTT--------------CSEEEEECSSCCCCCCC------------CTTEEEC-SCE
T ss_pred cCCCEEEEEcCCCCHHHHHHHHHHhC--------------CeEEEEEECCCCCCCCC------------CCceEEc-CCe
Confidence 45789999999999999999999987 899999986 6655321 2478877 678
Q ss_pred EEEeCCeEEEcCCcEEEeeEEEEcCCCCCc-hhhhc-cCCCCCCCCccccCCC---cccCCCCCEEEeccccccCcCCCC
Q 023375 91 KDVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLVKS-LDLPKSPGGRIGIDEW---LRVPSVQDVFAVGDCSGYLESTGK 165 (283)
Q Consensus 91 ~~v~~~~v~~~~g~~i~~d~vi~a~G~~~~-~~~~~-~~l~~~~~g~i~Vd~~---l~~~~~~~VfaiGD~a~~~~~~~~ 165 (283)
+++++++|+++||+++++|.||+|+|.+|+ +++.. ++++.+.++++ ++.+ +++ +.|+||++|||+.
T Consensus 248 ~~i~~~~V~~~dG~~i~~D~Vi~atG~~p~~~~l~~~~gl~~~~~~~v-~~~~~~~~~t-~~p~i~aiGd~~~------- 318 (464)
T 2xve_A 248 VRVDTENAYFADGSSEKVDAIILCTGYIHHFPFLNDDLRLVTNNRLWP-LNLYKGVVWE-DNPKFFYIGMQDQ------- 318 (464)
T ss_dssp EEECSSEEEETTSCEEECSEEEECCCBCCCCTTBCTTTCCCCCSSSCC-SSEETTTEES-SSTTEEECSCSCC-------
T ss_pred EEEeCCEEEECCCCEEeCCEEEECCCCCCCCCCcCcccccccCCCccc-ccccceEecC-CCCCEEEEeCccc-------
Confidence 899888999999999999999999999999 66665 67777665565 4433 445 8999999999884
Q ss_pred cCCCcchHHHHHHHHHHHHHHHH
Q 023375 166 TVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 166 ~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
......|..||+++|++|..
T Consensus 319 ---~~~~~~a~~qa~~~a~~l~G 338 (464)
T 2xve_A 319 ---WYSFNMFDAQAWYARDVIMG 338 (464)
T ss_dssp ---SSCHHHHHHHHHHHHHHHTT
T ss_pred ---ccchHHHHHHHHHHHHHHcC
Confidence 34678899999999998853
No 84
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.74 E-value=1.9e-17 Score=153.03 Aligned_cols=160 Identities=16% Similarity=0.172 Sum_probs=114.7
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCC--------------------CCHHHH
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS--------------------FDDRLR 71 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~--------------------~~~~~~ 71 (283)
+.++|+|||||.+|+|+|.+|++..+ ..+|+++++. .++|. ++++..
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~------------~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~ 293 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYP------------SVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAER 293 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCT------------TEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHH
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCC------------CCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHH
Confidence 46899999999999999999998721 1899999997 56552 233333
Q ss_pred HHHHHHHHh--------------------------CCCEEEeC-ceEEEeCC--e--EEEc---CCc--EEEeeEEEEcC
Q 023375 72 HYATTQLSK--------------------------SGVRLVRG-IVKDVDSQ--K--LILN---DGT--EVPYGLLVWST 115 (283)
Q Consensus 72 ~~~~~~l~~--------------------------~gV~v~~~-~V~~v~~~--~--v~~~---~g~--~i~~d~vi~a~ 115 (283)
..+.+.+.. .||+++++ +|++++.+ . +++. +|+ ++++|.||+|+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~At 373 (463)
T 3s5w_A 294 ERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILAT 373 (463)
T ss_dssp HHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECC
T ss_pred HHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEee
Confidence 333333332 69999999 79888653 2 5665 665 49999999999
Q ss_pred CCCCc---hhhhccCCCCCCCCccccCCCcccCC----CCCEEEeccccccCcCCCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 116 GVGPS---TLVKSLDLPKSPGGRIGIDEWLRVPS----VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 116 G~~~~---~~~~~~~l~~~~~g~i~Vd~~l~~~~----~~~VfaiGD~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
|.+|+ +++..+.... |++.||+++++.. .++||++|||..... ...|.....|.+++++++.++.+
T Consensus 374 G~~p~~~~~~l~~l~~~~---g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~g----~~~~~l~~~a~r~~~i~~~~~~~ 446 (463)
T 3s5w_A 374 GYERQLHRQLLEPLAEYL---GDHEIGRDYRLQTDERCKVAIYAQGFSQASHG----LSDTLLSVLPVRAEEISGSLYQH 446 (463)
T ss_dssp CEECCC-CTTTGGGGGGB---C--CCCTTSBCCBCTTBCSEEEESSCCHHHHC----TTTTSSTTHHHHHHHHHHHHHHH
T ss_pred CCCCCCccchhHHHHHHh---CCcccCcccccccCCCCCCeEEEcCCCcccCC----cCccchhHHHHHHHHHHHHHHhh
Confidence 99998 4555443322 7899999999854 356999999986422 23467888899999999877766
Q ss_pred Hhh
Q 023375 189 IGK 191 (283)
Q Consensus 189 ~~~ 191 (283)
...
T Consensus 447 ~~~ 449 (463)
T 3s5w_A 447 LKP 449 (463)
T ss_dssp HC-
T ss_pred cCC
Confidence 543
No 85
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.73 E-value=5.8e-18 Score=164.14 Aligned_cols=143 Identities=17% Similarity=0.091 Sum_probs=116.0
Q ss_pred ccCeEEEEc--cCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCC-HHHHHHHHHHHHhCCCEEEeC
Q 023375 13 RLLHCVVVG--GGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFD-DRLRHYATTQLSKSGVRLVRG 88 (283)
Q Consensus 13 ~~~~vvVvG--gG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~-~~~~~~~~~~l~~~gV~v~~~ 88 (283)
..++|+||| ||++|+|+|..|++.+ .+|+++++. .+++... +.....+.+.|++.||+++++
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g--------------~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~ 587 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKG--------------YEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTD 587 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTT--------------CEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEES
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCC--------------CeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcC
Confidence 456899999 9999999999999887 899999997 6665443 455778888999999999999
Q ss_pred -ceEEEeCCeEEEc-----CCcEEEeeEEEEcCCCCCch-hhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCc
Q 023375 89 -IVKDVDSQKLILN-----DGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLE 161 (283)
Q Consensus 89 -~V~~v~~~~v~~~-----~g~~i~~d~vi~a~G~~~~~-~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~ 161 (283)
+|++++.+++.+. +++++++|.||+|+|.+|+. +...++.. +. ++ +.|+||++|||+.
T Consensus 588 ~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~~~l~~~----~~-------~t-~~~~VyaiGD~~~--- 652 (690)
T 3k30_A 588 HAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPREELYLDLVAR----RD-------AG-EIASVRGIGDAWA--- 652 (690)
T ss_dssp EEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEEECCHHHHHHHHH----HH-------HT-SCSEEEECGGGTS---
T ss_pred cEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCCCChHHHHHHhhh----hc-------cc-CCCCEEEEeCCCc---
Confidence 8999999876553 45689999999999999984 44332211 11 45 7899999999995
Q ss_pred CCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 162 STGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 162 ~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
++....|+.||+.+|.||...+.
T Consensus 653 -------~~~~~~A~~~g~~aa~~i~~~l~ 675 (690)
T 3k30_A 653 -------PGTIAAAVWSGRRAAEEFDAVLP 675 (690)
T ss_dssp -------CBCHHHHHHHHHHHHHHTTCCCC
T ss_pred -------hhhHHHHHHHHHHHHHHHHhhcc
Confidence 56777899999999999987764
No 86
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.72 E-value=1.1e-17 Score=163.13 Aligned_cols=144 Identities=16% Similarity=0.233 Sum_probs=115.5
Q ss_pred ccCeEEEEc--cCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCC--CCHHHHHHHHHHHHhCCCEEEeC
Q 023375 13 RLLHCVVVG--GGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS--FDDRLRHYATTQLSKSGVRLVRG 88 (283)
Q Consensus 13 ~~~~vvVvG--gG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~--~~~~~~~~~~~~l~~~gV~v~~~ 88 (283)
..++|+||| ||++|+|+|..|++++ .+|+++++..+++. ++.. ...+.+.|++.||+++++
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G--------------~~Vtlv~~~~l~~~~~~~~~-~~~~~~~l~~~GV~i~~~ 591 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAG--------------HEVTIVSGVHLANYMHFTLE-YPNMMRRLHELHVEELGD 591 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTT--------------CEEEEEESSCTTHHHHHTTC-HHHHHHHHHHTTCEEECS
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcC--------------CEEEEEeccccccccccccc-HHHHHHHHHhCCCEEEcC
Confidence 357999999 9999999999999987 89999998774331 2222 466778899999999999
Q ss_pred -ceEEEeCCeEEEc----CC-cE------------------EEeeEEEEcCCCCCch-hhhccCCCCCCCCccccCCCcc
Q 023375 89 -IVKDVDSQKLILN----DG-TE------------------VPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLR 143 (283)
Q Consensus 89 -~V~~v~~~~v~~~----~g-~~------------------i~~d~vi~a~G~~~~~-~~~~~~l~~~~~g~i~Vd~~l~ 143 (283)
+|++|+++.+.+. ++ ++ +++|.||+|+|.+|+. +...++ ..+|++++
T Consensus 592 ~~v~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~~l~--------~~vd~~~~ 663 (729)
T 1o94_A 592 HFCSRIEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLWNELK--------ARESEWAE 663 (729)
T ss_dssp EEEEEEETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHHHHHHH--------HTGGGTGG
T ss_pred cEEEEEECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCChHHHHHHh--------hhcccccc
Confidence 8999998876542 33 33 9999999999999994 444332 13788899
Q ss_pred cCCCCCEEEeccccccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHh
Q 023375 144 VPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 190 (283)
Q Consensus 144 ~~~~~~VfaiGD~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~ 190 (283)
+ +.|+||++|||+. |.++..|+.||+.+|.||...+
T Consensus 664 t-~~~~VyAiGD~~~----------~~~~~~A~~~G~~aA~~i~~~l 699 (729)
T 1o94_A 664 N-DIKGIYLIGDAEA----------PRLIADATFTGHRVAREIEEAN 699 (729)
T ss_dssp G-TCCEEEECGGGTS----------CCCHHHHHHHHHHHHHTTTSSC
T ss_pred c-CCCCeEEEeCccc----------hhhHHHHHHHHHHHHHHhhhhc
Confidence 8 8999999999984 5678899999999999997654
No 87
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.67 E-value=2.1e-16 Score=158.19 Aligned_cols=139 Identities=19% Similarity=0.241 Sum_probs=112.9
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhCCCEEEeC-ceE
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVK 91 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~ 91 (283)
.++|+|||||++|+|+|..|++.+ .+|+++++. .+++ . .+.+++.||+++++ .|+
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G--------------~~Vtvv~~~~~~~~----~-----~~~l~~~GV~v~~~~~v~ 340 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATG--------------GVVAVIDARSSISA----A-----AAQAVADGVQVISGSVVV 340 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGT--------------CCSEEEESCSSCCH----H-----HHHHHHTTCCEEETEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcC--------------CcEEEEECCCccch----h-----HHHHHhCCeEEEeCCEeE
Confidence 479999999999999999999887 789999987 5442 1 56688999999999 899
Q ss_pred EEeC--C----eEEEcC-------C--cEEEeeEEEEcCCCCCch-hhhccCCCCCCCCccccCCCccc----CCCCCEE
Q 023375 92 DVDS--Q----KLILND-------G--TEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWLRV----PSVQDVF 151 (283)
Q Consensus 92 ~v~~--~----~v~~~~-------g--~~i~~d~vi~a~G~~~~~-~~~~~~l~~~~~g~i~Vd~~l~~----~~~~~Vf 151 (283)
+++. + .|++.+ | +++++|.|++++|.+|+. ++... .+.+.||++++. ++.|+||
T Consensus 341 ~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~------~g~i~vd~~~~~~v~~ts~p~Iy 414 (965)
T 2gag_A 341 DTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQR------QGKLDWDTTIHAFVPADAVANQH 414 (965)
T ss_dssp EEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHHT------TCCEEEETTTTEEEECSCCTTEE
T ss_pred EEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHhC------CCcEEEcCcccccccCCCCCCEE
Confidence 9975 3 566664 4 679999999999999994 44332 467889988871 4899999
Q ss_pred EeccccccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 152 AVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 152 aiGD~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
|+|||+.. +.. ..|..||+.+|.||...+.
T Consensus 415 AaGD~a~~---------~~l-~~A~~~G~~aA~~i~~~lg 444 (965)
T 2gag_A 415 LAGAMTGR---------LDT-ASALSTGAATGAAAATAAG 444 (965)
T ss_dssp ECGGGGTC---------CSH-HHHHHHHHHHHHHHHHHTT
T ss_pred EEEecCCc---------hhH-HHHHHHHHHHHHHHHHHcC
Confidence 99999953 333 4899999999999988764
No 88
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.66 E-value=4.3e-16 Score=143.57 Aligned_cols=138 Identities=14% Similarity=0.129 Sum_probs=106.0
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccE-EEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeCce
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH-VTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIV 90 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~-V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V 90 (283)
.+.++|+|||||++|+|+|.+|++.+ .+ |+++++...+ +.+.||.+. ..|
T Consensus 210 ~~~k~VvVvG~G~sg~e~A~~l~~~~--------------~~~V~l~~r~~~~--------------l~~~~i~~~-~~v 260 (447)
T 2gv8_A 210 FVGESVLVVGGASSANDLVRHLTPVA--------------KHPIYQSLLGGGD--------------IQNESLQQV-PEI 260 (447)
T ss_dssp GTTCCEEEECSSHHHHHHHHHHTTTS--------------CSSEEEECTTCCS--------------CBCSSEEEE-CCE
T ss_pred cCCCEEEEEccCcCHHHHHHHHHHHh--------------CCcEEEEeCCCCc--------------CCCCCeEEe-cCe
Confidence 35789999999999999999999887 67 9999987322 455677742 378
Q ss_pred EEEe--CCeEEEcCCcE-EEeeEEEEcCCCCCc-hh-----hhccCCCCCCCCccccCCCccc--CCCCCEEEecccccc
Q 023375 91 KDVD--SQKLILNDGTE-VPYGLLVWSTGVGPS-TL-----VKSLDLPKSPGGRIGIDEWLRV--PSVQDVFAVGDCSGY 159 (283)
Q Consensus 91 ~~v~--~~~v~~~~g~~-i~~d~vi~a~G~~~~-~~-----~~~~~l~~~~~g~i~Vd~~l~~--~~~~~VfaiGD~a~~ 159 (283)
+++. +..|+++||++ +++|.||+|+|.+|+ ++ +..++..+..++.+.++.+.++ .+.|++|++||+..
T Consensus 261 ~~~~~~~~~v~~~dG~~~~~~D~vi~atG~~~~~~~l~~~~l~~~~~~i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~- 339 (447)
T 2gv8_A 261 TKFDPTTREIYLKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALH- 339 (447)
T ss_dssp EEEETTTTEEEETTTEEECCCSEEEECCCBCCCCCCHHHHSCCSTTTCCCSSSSSCCSEETTTEETTCTTEEESSCCBS-
T ss_pred EEEecCCCEEEECCCCEeccCCEEEECCCCCcCCCCCcccccccccCceecCCCcccccccccccCCCCcEEEEecccc-
Confidence 8884 45899999987 799999999999999 66 5544222223455556655552 48899999999984
Q ss_pred CcCCCCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 160 LESTGKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 160 ~~~~~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
...++.|..||+++|++|..
T Consensus 340 ---------~~~~~~a~~qa~~~a~~~~g 359 (447)
T 2gv8_A 340 ---------VVPFPTSQAQAAFLARVWSG 359 (447)
T ss_dssp ---------SCHHHHHHHHHHHHHHHHTT
T ss_pred ---------ccCchHHHHHHHHHHHHHcC
Confidence 23688999999999999864
No 89
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.65 E-value=6.2e-16 Score=149.49 Aligned_cols=149 Identities=18% Similarity=0.204 Sum_probs=114.6
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhH------HHhh----------------cCCCC-CccEEEEEeCC-CCC-CCCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRD------VRQR----------------YSHVK-DYIHVTLIEAN-EIL-SSFD 67 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~------~~~~----------------~~~~~-~~~~V~li~~~-~~l-~~~~ 67 (283)
..++|+|||||++|+|+|..|++.+.+. +.+. +|... ...+|+++++. ..+ +.++
T Consensus 493 ~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~ 572 (671)
T 1ps9_A 493 VGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLG 572 (671)
T ss_dssp CCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSC
T ss_pred CCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhccccc
Confidence 4689999999999999999999765311 1111 12222 34789999986 444 4577
Q ss_pred HHHHHHHHHHHHhCCCEEEeC-ceEEEeCCeEEE-cCC--cEEEeeEEEEcCCCCCch-hhhccCCCCCCCCccccCCCc
Q 023375 68 DRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLIL-NDG--TEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGIDEWL 142 (283)
Q Consensus 68 ~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~~v~~-~~g--~~i~~d~vi~a~G~~~~~-~~~~~~l~~~~~g~i~Vd~~l 142 (283)
+.....+.+.|++.||+++++ +|++++++++++ .+| +++++|.||||+|.+|+. +...+
T Consensus 573 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~~~G~~~~i~~D~Vi~a~G~~p~~~l~~~l---------------- 636 (671)
T 1ps9_A 573 KTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVICAGQEPNRALAQPL---------------- 636 (671)
T ss_dssp TTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEEETTEEEEECCSEEEECCCEEECCTTHHHH----------------
T ss_pred cccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEecCCeEEEEeCCEEEECCCccccHHHHHHH----------------
Confidence 777888889999999999999 899999888877 677 579999999999999984 33322
Q ss_pred ccCCCCCEEEeccccccCcCCCCcCCCcchHHHHHHHHHHHHHH
Q 023375 143 RVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLL 186 (283)
Q Consensus 143 ~~~~~~~VfaiGD~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i 186 (283)
+. ..++||++|||+.. .+..++.|++||..+|.||
T Consensus 637 ~~-~g~~v~aiGD~~~~--------~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 637 ID-SGKTVHLIGGCDVA--------MELDARRAIAQGTRLALEI 671 (671)
T ss_dssp HT-TTCCEEECGGGTCC--------SSCCHHHHHHHHHHHHHHC
T ss_pred Hh-cCCCEEEECCcCcc--------CchhHHHHHHHHHHHHHhC
Confidence 11 23789999999963 2457999999999999985
No 90
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.59 E-value=5.3e-15 Score=138.03 Aligned_cols=103 Identities=17% Similarity=0.206 Sum_probs=87.4
Q ss_pred HHHHhCCCEEEeC-ceEEEeCC----eEEEcCCcEEEeeEEEEcCCCCCch-hhhccCCCC--CCCCccc-cCCCcccCC
Q 023375 76 TQLSKSGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPST-LVKSLDLPK--SPGGRIG-IDEWLRVPS 146 (283)
Q Consensus 76 ~~l~~~gV~v~~~-~V~~v~~~----~v~~~~g~~i~~d~vi~a~G~~~~~-~~~~~~l~~--~~~g~i~-Vd~~l~~~~ 146 (283)
+.+++.||+++++ .|++++.+ .+++++|+++++|.||+++|.+|+. +++.+++++ +++|++. ||++++ +
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~~~~~~~g~i~~vd~~~~--s 342 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGGKLRFRRGYYSPVLDEYHR--I 342 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCCEEEETTEEEECCCTTSE--E
T ss_pred HHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCCccccCCceeeccccccC--c
Confidence 3466789999999 89999765 3677889999999999999999994 888888765 4678887 899998 7
Q ss_pred CCCEEEeccccccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHh
Q 023375 147 VQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 190 (283)
Q Consensus 147 ~~~VfaiGD~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~ 190 (283)
.|+||++|||+. +..+..|..||+.+|.||...+
T Consensus 343 ~~~vya~GD~~~----------~~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 343 KDGIYVAGSAVS----------IKPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp ETTEEECSTTTC----------CCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeccCC----------ccCHHHHHHHHHHHHHHHHHHc
Confidence 899999999995 3468899999999999998765
No 91
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.58 E-value=4.8e-15 Score=139.70 Aligned_cols=103 Identities=16% Similarity=0.257 Sum_probs=77.2
Q ss_pred hCCCEEEe---CceEEEeCCeEEEcCCcEEEeeEEEEcCCCCCch-hhhccCC------CCCC--CCccccCCCcccCCC
Q 023375 80 KSGVRLVR---GIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPST-LVKSLDL------PKSP--GGRIGIDEWLRVPSV 147 (283)
Q Consensus 80 ~~gV~v~~---~~V~~v~~~~v~~~~g~~i~~d~vi~a~G~~~~~-~~~~~~l------~~~~--~g~i~Vd~~l~~~~~ 147 (283)
+.+|+++. ..|++|++++|+++||+++++|.||+|||+.++. ++..+++ .+++ ++.......+.+.+.
T Consensus 342 ~~nV~lv~~~~~~I~~it~~gv~~~dG~~~~~DvIV~ATGf~~~~~~~~~~~i~g~~G~~l~~~w~~~~~~y~g~~v~gf 421 (540)
T 3gwf_A 342 RPNVEAVAIKENPIREVTAKGVVTEDGVLHELDVLVFATGFDAVDGNYRRIEIRGRDGLHINDHWDGQPTSYLGVSTANF 421 (540)
T ss_dssp STTEEEEETTTSCEEEECSSEEEETTCCEEECSEEEECCCBSCSSHHHHTSEEECGGGCBHHHHTSSSCCCBTTTBCTTC
T ss_pred CCCEEEEeCCCCCccEEecCeEEcCCCCEEECCEEEECCccCccccCcCcceEECCCCcCHHHhhccChhhccccccCCC
Confidence 45899984 4899999999999999999999999999999985 5544332 1111 122344455778899
Q ss_pred CCEEEe-ccccccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 148 QDVFAV-GDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 148 ~~Vfai-GD~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
||+|.+ |..+. .......+..|++++++.|....+
T Consensus 422 PN~f~~~Gp~~~---------~~s~~~~~e~q~~~i~~~i~~~~~ 457 (540)
T 3gwf_A 422 PNWFMVLGPNGP---------FTNLPPSIETQVEWISDTIGYAER 457 (540)
T ss_dssp TTEEESSCSSCB---------CSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEecCCCC---------CccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999 76653 244567888999999999877665
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.48 E-value=2.4e-13 Score=128.25 Aligned_cols=102 Identities=17% Similarity=0.204 Sum_probs=77.4
Q ss_pred CCCEEE---eCceEEEeCCeEEEcCCcEEEeeEEEEcCCCCCc-hhhhccCCCCCCCCccccC---------CCcccCCC
Q 023375 81 SGVRLV---RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGID---------EWLRVPSV 147 (283)
Q Consensus 81 ~gV~v~---~~~V~~v~~~~v~~~~g~~i~~d~vi~a~G~~~~-~~~~~~~l~~~~~g~i~Vd---------~~l~~~~~ 147 (283)
.+|+++ ...|+++++++|+++| +++++|.||||||+.++ .+...+++. ..+|....+ ..+.+.++
T Consensus 351 ~~v~lv~~~~~~i~~i~~~gv~~~d-~~~~~D~ii~atG~~~~~~~~~~~~i~-g~~G~~l~~~w~~~~~~y~~~~v~~~ 428 (542)
T 1w4x_A 351 DNVHLVDTLSAPIETITPRGVRTSE-REYELDSLVLATGFDALTGALFKIDIR-GVGNVALKEKWAAGPRTYLGLSTAGF 428 (542)
T ss_dssp TTEEEEETTTSCEEEECSSEEEESS-CEEECSEEEECCCCCCTTHHHHTSEEE-CGGGCBHHHHTTTSCCCBTTTBCTTS
T ss_pred CCEEEEecCCCCceEEcCCeEEeCC-eEEecCEEEEcCCccccccCcCceeeE-CCCCCCHHHhhcCchheecccccCCC
Confidence 357777 3379999999999999 99999999999999996 555543322 233544443 23667789
Q ss_pred CCEEEe-ccccccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 148 QDVFAV-GDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 148 ~~Vfai-GD~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
||+|++ |+.+.. ..+..++.|.+|++++|++|....+
T Consensus 429 Pn~f~~~G~~~~~-------~~~~~~~~~e~q~~~ia~~i~~~~~ 466 (542)
T 1w4x_A 429 PNLFFIAGPGSPS-------ALSNMLVSIEQHVEWVTDHIAYMFK 466 (542)
T ss_dssp TTEEESSCTTSSG-------GGSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEcCCCCCc-------ccccHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 988731 2366678999999999999988776
No 93
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.48 E-value=1.6e-13 Score=129.43 Aligned_cols=103 Identities=12% Similarity=0.237 Sum_probs=71.5
Q ss_pred CCCEEEe--C-ceEEEeCCeEEEcCCcEEEeeEEEEcCCCCCch-hhhccCCCCCCCCcc---------ccCCCcccCCC
Q 023375 81 SGVRLVR--G-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRI---------GIDEWLRVPSV 147 (283)
Q Consensus 81 ~gV~v~~--~-~V~~v~~~~v~~~~g~~i~~d~vi~a~G~~~~~-~~~~~~l~~~~~g~i---------~Vd~~l~~~~~ 147 (283)
.+|+++. + .|++|++++|+++|| ++++|.||+|||+.+.+ ++...++ ...+|.. .....+.+.+.
T Consensus 351 ~nV~lv~~~~~~I~~it~~gv~~~dG-~~~~D~IV~ATGf~~~~~~~~~~~i-~g~~G~~l~~~w~~~~~~y~g~~~~gf 428 (545)
T 3uox_A 351 DNVHLVDIREAPIQEVTPEGIKTADA-AYDLDVIIYATGFDAVTGSLDRIDI-RGKDNVRLIDAWAEGPSTYLGLQARGF 428 (545)
T ss_dssp TTEEEEETTTSCEEEEETTEEEESSC-EEECSEEEECCCCBSSSCSCTTSEE-ECGGGCBHHHHTTTSCCCBTTTBCTTC
T ss_pred CCEEEEecCCCCceEEccCeEEeCCC-eeecCEEEECCccccccccCCCceE-ECCCCccHHHhhccccceeeccccCCC
Confidence 3889984 4 899999999999999 99999999999999752 3222221 1122322 22224567789
Q ss_pred CCEEEeccccccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 148 QDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 148 ~~VfaiGD~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
||+|.+.--.. ..........+..|++++++.|....+
T Consensus 429 PN~f~~~gp~~------~~~~~s~~~~~e~~~~~i~~~i~~~~~ 466 (545)
T 3uox_A 429 PNFFTLVGPHN------GSTFCNVGVCGGLQAEWVLRMISYMKD 466 (545)
T ss_dssp TTEEECSSGGG------TGGGSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEeCCCC------CCccccHHHHHHHHHHHHHHHHHHHHH
Confidence 99998843221 112355667888999999999887665
No 94
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.44 E-value=1.4e-12 Score=123.05 Aligned_cols=103 Identities=16% Similarity=0.239 Sum_probs=72.7
Q ss_pred CCCEEE---eCceEEEeCCeEEEcCCcEEEeeEEEEcCCCCCch-hhhccCCCCCCCC---------ccccCCCcccCCC
Q 023375 81 SGVRLV---RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGG---------RIGIDEWLRVPSV 147 (283)
Q Consensus 81 ~gV~v~---~~~V~~v~~~~v~~~~g~~i~~d~vi~a~G~~~~~-~~~~~~l~~~~~g---------~i~Vd~~l~~~~~ 147 (283)
.+|+++ ...|++|++++|.++|| ++++|.||+|||+.++. ++...++. ..+| .......+.+.+.
T Consensus 356 ~~V~lvd~~~~~I~~it~~gv~~~dG-~~~~D~iI~ATGf~~~~~~~~~~~i~-g~~G~~l~~~w~~~~~~y~g~~~~gf 433 (549)
T 4ap3_A 356 DNVELVDLRSTPIVGMDETGIVTTGA-HYDLDMIVLATGFDAMTGSLDKLEIV-GRGGRTLKETWAAGPRTYLGLGIDGF 433 (549)
T ss_dssp TTEEEEETTTSCEEEEETTEEEESSC-EEECSEEEECCCEEESSTTGGGSEEE-CGGGCBHHHHTTTSCCCBTTTBCTTC
T ss_pred CCEEEEeCCCCCceEEeCCcEEeCCC-ceecCEEEECCcccccccccCceeEE-CCCCcCHHHhhccchhhccccccCCC
Confidence 388998 55899999999999999 99999999999999875 44443321 1112 2333344567789
Q ss_pred CCEEEeccccccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 148 QDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 148 ~~VfaiGD~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
||.|.+.--. ...........+..|++++++.|....+
T Consensus 434 PN~f~~~Gp~------~~~~~~s~~~~~e~~~~~i~~~i~~~~~ 471 (549)
T 4ap3_A 434 PNFFNLTGPG------SPSVLANMVLHSELHVDWVADAIAYLDA 471 (549)
T ss_dssp TTEEETTCTT------SCGGGSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEeCCC------CCCcCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999863211 1112345567788999999998876665
No 95
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.36 E-value=2.9e-12 Score=110.99 Aligned_cols=160 Identities=17% Similarity=0.161 Sum_probs=105.1
Q ss_pred CeEEEEccCcHHHHHHHHHHHh-hhhHHHhhcCCCCCccEEEEEeCC-CCCCC---------------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDF-IMRDVRQRYSHVKDYIHVTLIEAN-EILSS--------------------------- 65 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~-~~~~~~~~~~~~~~~~~V~li~~~-~~l~~--------------------------- 65 (283)
.+|+|||||++|+++|..|++. + .+|+|+|+. .+...
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G--------------~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~ 105 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPN--------------VQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVA 105 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTT--------------SCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCC
T ss_pred cCEEEECccHHHHHHHHHHHHcCC--------------CeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCC
Confidence 4799999999999999999985 5 899999986 33110
Q ss_pred -----------CCHHHHHHHHHHHHh-CCCEEEeC-ceEEEe--CC---eEEEc---------CC-----cEEEeeEEEE
Q 023375 66 -----------FDDRLRHYATTQLSK-SGVRLVRG-IVKDVD--SQ---KLILN---------DG-----TEVPYGLLVW 113 (283)
Q Consensus 66 -----------~~~~~~~~~~~~l~~-~gV~v~~~-~V~~v~--~~---~v~~~---------~g-----~~i~~d~vi~ 113 (283)
....+...+.+.+.+ .||+++++ +|+++. .+ +|.+. ++ .++++|.||.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~ 185 (284)
T 1rp0_A 106 YDEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVS 185 (284)
T ss_dssp CEECSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEE
T ss_pred cccCCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEE
Confidence 123444455566655 69999999 898885 33 34442 32 5799999999
Q ss_pred cCCCCCc--hh----hhccC--CCCCCCCccccCC-------CcccCCCCCEEEeccccccCcCCCCcCCCcchHHHHHH
Q 023375 114 STGVGPS--TL----VKSLD--LPKSPGGRIGIDE-------WLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQ 178 (283)
Q Consensus 114 a~G~~~~--~~----~~~~~--l~~~~~g~i~Vd~-------~l~~~~~~~VfaiGD~a~~~~~~~~~~~p~~~~~A~~q 178 (283)
|+|..+. .+ ...++ ..+.....+.++. ..++ ..|++|++||++.... +....-++...|..+
T Consensus 186 AtG~~s~~~~~~~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~-~~p~i~a~G~~~~~~~--g~~~~gp~~~~~~~s 262 (284)
T 1rp0_A 186 SCGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTRE-VVPGMIVTGMEVAEID--GAPRMGPTFGAMMIS 262 (284)
T ss_dssp CCCSSSTTTTHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEE-EETTEEECTHHHHHHH--TCEECCSCCHHHHHH
T ss_pred CCCCchHHHHHHHHHhhhccCCCCcCCcCCchhhhhhHHHhhcccc-ccCCEEEEeeehhhhc--CCCCcChHHHHHHHh
Confidence 9998765 21 11112 1111111222221 2233 5699999999875321 211123356678899
Q ss_pred HHHHHHHHHHHhh
Q 023375 179 GKYLFSLLNRIGK 191 (283)
Q Consensus 179 g~~~a~~i~~~~~ 191 (283)
|+.+|.+|...+.
T Consensus 263 G~~~a~~i~~~l~ 275 (284)
T 1rp0_A 263 GQKAGQLALKALG 275 (284)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998775
No 96
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.06 E-value=5.5e-10 Score=100.83 Aligned_cols=94 Identities=17% Similarity=0.370 Sum_probs=74.0
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHH-------------HHHHHHH
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRH-------------YATTQLS 79 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~-------------~~~~~l~ 79 (283)
+..+|+|||||++|+.+|..|.... .+|+||++...++...+.+.. ...+.++
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~--------------~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~ 73 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKC--------------DDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYE 73 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTC--------------SCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHH
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCC--------------CEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHH
Confidence 4458999999999999999994333 899999997544332222222 2345677
Q ss_pred hCCCEEEeC-ceEEEeCC--eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 80 KSGVRLVRG-IVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 80 ~~gV~v~~~-~V~~v~~~--~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
+.||+++++ +|++++.+ .|++++|+++.||.+|+|||.+|.
T Consensus 74 ~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~ 117 (385)
T 3klj_A 74 KNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIAN 117 (385)
T ss_dssp HTTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC
T ss_pred HCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcC
Confidence 899999999 89999865 788999999999999999999876
No 97
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.03 E-value=1.1e-10 Score=106.80 Aligned_cols=94 Identities=22% Similarity=0.394 Sum_probs=72.1
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCC---CCCCCH---------HHHHHHHHHHHhCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI---LSSFDD---------RLRHYATTQLSKSG 82 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~---l~~~~~---------~~~~~~~~~l~~~g 82 (283)
|+|||||||++|+.+|..|++..+ +.+||||++++. .|.++. ++...+.+.+++.|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~------------~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~g 70 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMP------------DLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN 70 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT------------TCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT
T ss_pred CcEEEECCCHHHHHHHHHHhccCc------------CCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCC
Confidence 589999999999999999987653 289999998732 122111 11111234567789
Q ss_pred CEEEeCceEEEeCC--eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 83 VRLVRGIVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 83 V~v~~~~V~~v~~~--~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
|+++.++|++|+.+ .|++++|++++||.+|+|+|.++.
T Consensus 71 v~~i~~~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 71 IEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp EEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEE
T ss_pred cEEEEeEEEEEECCCCEEEECCCCEEECCEEEEeCCCCcc
Confidence 99999999999865 799999999999999999998653
No 98
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.01 E-value=1e-09 Score=95.53 Aligned_cols=93 Identities=13% Similarity=0.237 Sum_probs=76.6
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC---CC--------CCCC----CHHHHHHHHHHH
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN---EI--------LSSF----DDRLRHYATTQL 78 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~---~~--------l~~~----~~~~~~~~~~~l 78 (283)
..+|+|||||++|+.+|..|++.+ .+|++||+. .. .|.+ ..++.+++.+.+
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYM--------------LKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHI 80 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHH
T ss_pred ccCEEEECccHHHHHHHHHHHHCC--------------CcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHH
Confidence 368999999999999999999876 899999984 11 1222 257788888889
Q ss_pred HhCCCEEEeCceEEEeCC----eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 79 SKSGVRLVRGIVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 79 ~~~gV~v~~~~V~~v~~~----~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
++.|++++..+|.+++.+ .+.+.+++++.+|.+|+|+|..|.
T Consensus 81 ~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 81 EKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRR 126 (323)
T ss_dssp HTTTCCEEESCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEEC
T ss_pred HHcCCEEEEEEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCc
Confidence 999999988878888655 477778889999999999999876
No 99
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.00 E-value=4.3e-10 Score=101.70 Aligned_cols=95 Identities=25% Similarity=0.300 Sum_probs=72.5
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCC--CCCCCHHH---------HHHHHHHHHhCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI--LSSFDDRL---------RHYATTQLSKSG 82 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~--l~~~~~~~---------~~~~~~~l~~~g 82 (283)
.|+|||||||+.|+.+|..|++.+. +.+|+|||+++. ...+...+ ...-.+.+.++|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~------------~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~g 69 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADP------------SIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHG 69 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCT------------TSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTT
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCc------------CCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCC
Confidence 5799999999999999999987652 279999998732 11111110 111124466789
Q ss_pred CEEEeCceEEEeCC--eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 83 VRLVRGIVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 83 V~v~~~~V~~v~~~--~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
|+++.++|++|+.+ .+++.+|++++||.+|+|+|.+++
T Consensus 70 v~~i~~~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~ 109 (401)
T 3vrd_B 70 IQVVHDSALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLL 109 (401)
T ss_dssp CEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC
T ss_pred CEEEEeEEEEEEccCcEEEecccceeecceeeeccCCccc
Confidence 99999999999865 688899999999999999999876
No 100
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.00 E-value=2.1e-09 Score=94.82 Aligned_cols=91 Identities=16% Similarity=0.243 Sum_probs=73.5
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CC---------------------CCCCC-----
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EI---------------------LSSFD----- 67 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~---------------------l~~~~----- 67 (283)
.+|+|||||++|+.+|..|++.+ .+|++||+. .+ ++.++
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g--------------~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSG--------------LSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQ 69 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSS--------------CCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCS
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCc
Confidence 58999999999999999999876 899999986 32 11111
Q ss_pred ------HHHHHHHHHHHHhCCCEEEeC-ceEEEeC--Ce---EEEcCCcEEEeeEEEEcCCCCCc
Q 023375 68 ------DRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK---LILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 68 ------~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~~---v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
..+.+++.+.+++.|++++.+ +|++++. +. |.+.++ ++.+|.||+|+|..+.
T Consensus 70 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 70 GPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGE 133 (357)
T ss_dssp SSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGG
T ss_pred cCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCC
Confidence 678888999999999999998 8988864 33 555666 8999999999996443
No 101
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.99 E-value=7.8e-10 Score=101.36 Aligned_cols=96 Identities=25% Similarity=0.412 Sum_probs=75.3
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCC---CC---------CCHHHHHHHHHHHHhC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---SS---------FDDRLRHYATTQLSKS 81 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l---~~---------~~~~~~~~~~~~l~~~ 81 (283)
.++|+|||||++|+++|..|++... .+.+|+||++.... |. ..+++...+.+.+++.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~-----------~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 72 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALG-----------SGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERK 72 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHG-----------GGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTT
T ss_pred CCcEEEECCcHHHHHHHHHHhccCC-----------CcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHC
Confidence 4689999999999999999998321 12899999987322 21 1223334456777889
Q ss_pred CCEEEeCceEEEeCC--eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 82 GVRLVRGIVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 82 gV~v~~~~V~~v~~~--~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
||+++.++|++++.+ .|++++|+++.||.+|+|+|.+|+
T Consensus 73 gv~~~~~~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~ 113 (437)
T 3sx6_A 73 GIHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLA 113 (437)
T ss_dssp TCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCCEEC
T ss_pred CCEEEEeEEEEEEcCCCEEEECCCCEEECCEEEECCCCCcC
Confidence 999997799999875 688899999999999999999887
No 102
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.99 E-value=2.1e-09 Score=92.50 Aligned_cols=92 Identities=20% Similarity=0.323 Sum_probs=74.6
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCC----------CCC----CCHHHHHHHHHHHHh
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI----------LSS----FDDRLRHYATTQLSK 80 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~----------l~~----~~~~~~~~~~~~l~~ 80 (283)
.+|+|||||++|+.+|..|++.+ .+|++||++.. .+. ...++..++.+.+.+
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRAR--------------KNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIER 68 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTT
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHh
Confidence 47999999999999999999887 89999996421 111 124677888888888
Q ss_pred C-CCEEEeCceEEEeCC----eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 81 S-GVRLVRGIVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 81 ~-gV~v~~~~V~~v~~~----~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
. +++++.++|++++.+ .|.+.+++++.+|.+|+|+|..|.
T Consensus 69 ~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~ 113 (297)
T 3fbs_A 69 YPTIHWVEGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDE 113 (297)
T ss_dssp CTTEEEEESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEE
T ss_pred cCCeEEEEeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCC
Confidence 7 789887788888654 577888989999999999999875
No 103
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.96 E-value=2.1e-09 Score=94.23 Aligned_cols=96 Identities=21% Similarity=0.267 Sum_probs=76.3
Q ss_pred HcccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCC-----C------------CCCC-----CH
Q 023375 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-----I------------LSSF-----DD 68 (283)
Q Consensus 11 ~~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~-----~------------l~~~-----~~ 68 (283)
.+...+|+|||||++|+.+|..|++.+ .+|+|||+.. + .|.+ ..
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~ 84 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAE--------------IKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGS 84 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTT--------------CCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHH
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHH
Confidence 345679999999999999999999887 8999999832 1 1232 34
Q ss_pred HHHHHHHHHHHhCCCEEEeCceEEEeCC--eEEE-----cCCcEEEeeEEEEcCCCCCc
Q 023375 69 RLRHYATTQLSKSGVRLVRGIVKDVDSQ--KLIL-----NDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 69 ~~~~~~~~~l~~~gV~v~~~~V~~v~~~--~v~~-----~~g~~i~~d~vi~a~G~~~~ 120 (283)
++..++.+.+++.|++++.+.|.+++.+ .+.+ .++.++.+|.+|+|+|..|.
T Consensus 85 ~~~~~~~~~~~~~gv~i~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~ 143 (338)
T 3itj_A 85 ELMDRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAK 143 (338)
T ss_dssp HHHHHHHHHHHHTTCEEECSCEEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHcCCEEEEeEEEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcC
Confidence 7888889999999999999888888764 3443 36778999999999999765
No 104
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.93 E-value=5.4e-09 Score=91.55 Aligned_cols=93 Identities=19% Similarity=0.263 Sum_probs=75.4
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCC------------CCCC-----CHHHHHHHHH
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------------LSSF-----DDRLRHYATT 76 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~------------l~~~-----~~~~~~~~~~ 76 (283)
..+|+|||||++|+.+|..|++.+ .+|+|||+..+ .|.+ ..++.+++.+
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 73 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQ--------------LSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQ 73 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHcC--------------CcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHH
Confidence 358999999999999999999876 89999998632 1222 2467778888
Q ss_pred HHHhCCCEEEeCceEEEeCC-------eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 77 QLSKSGVRLVRGIVKDVDSQ-------KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 77 ~l~~~gV~v~~~~V~~v~~~-------~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
.+++.|++++.++|.+++.+ .|.+.+|+++.+|.+|+|+|..|.
T Consensus 74 ~~~~~gv~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 74 QAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPR 124 (325)
T ss_dssp HHHHTTCEEEECCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEEC
T ss_pred HHHHcCCEEEeeeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcC
Confidence 88999999988888877533 466778889999999999999765
No 105
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.92 E-value=6.6e-09 Score=90.15 Aligned_cols=94 Identities=16% Similarity=0.194 Sum_probs=74.3
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEE-EeCCCC------------CCCCC-----HHHHHHH
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTL-IEANEI------------LSSFD-----DRLRHYA 74 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~l-i~~~~~------------l~~~~-----~~~~~~~ 74 (283)
+..+|+|||||++|+.+|..|++.+ .+|++ +|++.+ .|.++ .++..++
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~li~e~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGG--------------LKNVVMFEKGMPGGQITSSSEIENYPGVAQVMDGISFMAPW 68 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHT--------------CSCEEEECSSSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCC--------------CCeEEEEeCCCCCceeeeeceeccCCCCCCCCCHHHHHHHH
Confidence 3468999999999999999999876 88999 986421 23333 5788888
Q ss_pred HHHHHhCCCEEEeCceEEE-eC--CeEE--EcCCcEEEeeEEEEcCCCCCc
Q 023375 75 TTQLSKSGVRLVRGIVKDV-DS--QKLI--LNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 75 ~~~l~~~gV~v~~~~V~~v-~~--~~v~--~~~g~~i~~d~vi~a~G~~~~ 120 (283)
.+.+++.|++++.++|.++ +. +.+. +.++.++.+|.+|+|+|..|.
T Consensus 69 ~~~~~~~~v~~~~~~v~~i~~~~~~~~~v~~~~~~~~~~d~lvlAtG~~~~ 119 (315)
T 3r9u_A 69 SEQCMRFGLKHEMVGVEQILKNSDGSFTIKLEGGKTELAKAVIVCTGSAPK 119 (315)
T ss_dssp HHHHTTTCCEEECCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HHHHHHcCcEEEEEEEEEEecCCCCcEEEEEecCCEEEeCEEEEeeCCCCC
Confidence 9999999999998888888 44 3444 543338999999999999775
No 106
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.92 E-value=1.5e-08 Score=88.91 Aligned_cols=91 Identities=18% Similarity=0.223 Sum_probs=73.3
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCC---------------CCC----CHHHHHH
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL---------------SSF----DDRLRHY 73 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l---------------~~~----~~~~~~~ 73 (283)
..+|+|||||++|+.+|..|++.+ .+|+|||+. .+. +.+ ..++..+
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRG--------------LSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKG 70 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHH
Confidence 358999999999999999998876 899999986 321 111 2567777
Q ss_pred HHHHHHhCCCEEEeC-ceEEEeCC----eEEEcCCcEEEeeEEEEcCCCC
Q 023375 74 ATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGVG 118 (283)
Q Consensus 74 ~~~~l~~~gV~v~~~-~V~~v~~~----~v~~~~g~~i~~d~vi~a~G~~ 118 (283)
+.+.+++.+++++.+ +|++++.+ .|.+.+|+++.+|.||+|+|..
T Consensus 71 l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 71 LVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTS
T ss_pred HHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCC
Confidence 888888899999988 89888653 3666778889999999999995
No 107
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.91 E-value=1.7e-08 Score=94.07 Aligned_cols=87 Identities=15% Similarity=0.106 Sum_probs=52.7
Q ss_pred CeEEEcCCcEEEeeEEEEcCCCCCch--hh-hcc-CCCCCCCCccccCCCcccC-------CCCCEEEeccccccCcCCC
Q 023375 96 QKLILNDGTEVPYGLLVWSTGVGPST--LV-KSL-DLPKSPGGRIGIDEWLRVP-------SVQDVFAVGDCSGYLESTG 164 (283)
Q Consensus 96 ~~v~~~~g~~i~~d~vi~a~G~~~~~--~~-~~~-~l~~~~~g~i~Vd~~l~~~-------~~~~VfaiGD~a~~~~~~~ 164 (283)
+++.+.+|+++++|.||+|||++++. ++ ..+ .+..+.+|++.|+.++++. ..++||+.|-+-+. .
T Consensus 386 ~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~~~t-h--- 461 (501)
T 4b63_A 386 EGAANDVKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCNERT-H--- 461 (501)
T ss_dssp ------CCCEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCCHHH-H---
T ss_pred CeeEeCCCeEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCeeeCCCcEEeecCCccCCCceEEecCCCccc-C---
Confidence 35667789999999999999999872 22 222 2445677888888776652 23569999844321 1
Q ss_pred CcCCCcchHHHHHHHHHHHHHH
Q 023375 165 KTVLPALAQVAERQGKYLFSLL 186 (283)
Q Consensus 165 ~~~~p~~~~~A~~qg~~~a~~i 186 (283)
+-.-|.+...|.+.|+++..-+
T Consensus 462 G~~~~~Ls~~a~R~~~I~~~l~ 483 (501)
T 4b63_A 462 GLSDSLLSVLAVRGGEMVQSIF 483 (501)
T ss_dssp CTTTTSSTTHHHHHHHHHHHHH
T ss_pred CcchhhHHHHHHHHHHHHHHHh
Confidence 1122555567888787664433
No 108
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.90 E-value=8e-09 Score=89.76 Aligned_cols=92 Identities=18% Similarity=0.281 Sum_probs=74.1
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCcc-EEEEEeCCCC------------CCCC-----CHHHHHHHHH
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANEI------------LSSF-----DDRLRHYATT 76 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~-~V~li~~~~~------------l~~~-----~~~~~~~~~~ 76 (283)
.+|+|||||++|+.+|..|++.+ . +|++||++.+ .|.+ .+++.+++.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g--------------~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 67 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGG--------------VKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQE 67 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHH
T ss_pred ceEEEECccHHHHHHHHHHHHCC--------------CCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHH
Confidence 47999999999999999999876 7 9999997521 1222 2567788888
Q ss_pred HHHhCCCEEEeCceEEEe--CC--eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 77 QLSKSGVRLVRGIVKDVD--SQ--KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 77 ~l~~~gV~v~~~~V~~v~--~~--~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
.+++.|++++..+|.+++ .+ .|.+.+|+++.+|.+|+|+|..|.
T Consensus 68 ~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~ 115 (311)
T 2q0l_A 68 QCFRFGLKHEMTAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPK 115 (311)
T ss_dssp HHHTTSCEEECSCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HHHHcCCEEEEEEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCC
Confidence 888999999887787775 34 466778889999999999998765
No 109
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.90 E-value=3.4e-09 Score=92.71 Aligned_cols=89 Identities=22% Similarity=0.273 Sum_probs=73.2
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCC-CC---------------CCC----CHHHHHH
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-IL---------------SSF----DDRLRHY 73 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~-~l---------------~~~----~~~~~~~ 73 (283)
..+|+|||||++|+.+|..|++.+ .+|++||+.. +. +.+ ..++..+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQ--------------ASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINN 72 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCC--------------CCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHH
Confidence 468999999999999999999876 8999999863 21 111 3678888
Q ss_pred HHHHHHhCCCEEEeC-ceEEEeCC-----eEEEcCCcEEEeeEEEEcCCC
Q 023375 74 ATTQLSKSGVRLVRG-IVKDVDSQ-----KLILNDGTEVPYGLLVWSTGV 117 (283)
Q Consensus 74 ~~~~l~~~gV~v~~~-~V~~v~~~-----~v~~~~g~~i~~d~vi~a~G~ 117 (283)
+.+.+++.|++++.+ +|++++.+ .|.+.+|+ +.+|.||+|+|.
T Consensus 73 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 73 LKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGN 121 (332)
T ss_dssp HHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTT
T ss_pred HHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCC
Confidence 889899999999988 89888643 46677775 999999999999
No 110
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.88 E-value=5.3e-08 Score=86.47 Aligned_cols=92 Identities=20% Similarity=0.246 Sum_probs=74.8
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CC-------C--------CCC----CHHHHHH
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EI-------L--------SSF----DDRLRHY 73 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~-------l--------~~~----~~~~~~~ 73 (283)
..+|+|||||++|+.+|..|++.+ .+|+|||+. .+ . +.+ ..++.++
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNN--------------ISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVES 79 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC--------------CCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHH
Confidence 468999999999999999999876 899999986 32 1 111 2567788
Q ss_pred HHHHHHhCCCEEEeC-ceEEEeCC-----eEEEcCCcEEEeeEEEEcCCCCC
Q 023375 74 ATTQLSKSGVRLVRG-IVKDVDSQ-----KLILNDGTEVPYGLLVWSTGVGP 119 (283)
Q Consensus 74 ~~~~l~~~gV~v~~~-~V~~v~~~-----~v~~~~g~~i~~d~vi~a~G~~~ 119 (283)
+.+.+++.+++++.+ +|++++.+ .|.+.+|+++.+|.+|+|+|..+
T Consensus 80 l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 80 LWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp HHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCS
T ss_pred HHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCc
Confidence 888888999999988 89888642 47777888999999999999943
No 111
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.87 E-value=7.5e-09 Score=94.04 Aligned_cols=94 Identities=21% Similarity=0.284 Sum_probs=73.3
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHH-------------HHHHHHHhC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRH-------------YATTQLSKS 81 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~-------------~~~~~l~~~ 81 (283)
++|+|||||++|+.+|..|++.+. ..+|++|++...++...+.+.. ...+.+++.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~------------~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~ 70 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGF------------EGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEA 70 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------------CSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHT
T ss_pred CCEEEEcccHHHHHHHHHHHccCc------------CCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHC
Confidence 489999999999999999998762 1569999987443322111111 123456788
Q ss_pred CCEEEeC-ceEEEeCC--eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 82 GVRLVRG-IVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 82 gV~v~~~-~V~~v~~~--~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
||+++.+ +|+.++.+ .|.+.+|+++.+|.+|+|||.+|.
T Consensus 71 ~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~ 112 (410)
T 3ef6_A 71 RIDMLTGPEVTALDVQTRTISLDDGTTLSADAIVIATGSRAR 112 (410)
T ss_dssp TCEEEESCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC
T ss_pred CCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEccCCccc
Confidence 9999999 89999865 788899999999999999998876
No 112
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.87 E-value=4.5e-09 Score=96.18 Aligned_cols=94 Identities=26% Similarity=0.370 Sum_probs=72.2
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCC--------------HHHHHHHHHHHHh
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFD--------------DRLRHYATTQLSK 80 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~--------------~~~~~~~~~~l~~ 80 (283)
.+|+|||||++|+.+|..|++.+. +.+|++|++...+|... ..+.....+.+++
T Consensus 5 ~~vvIIGgG~aGl~aA~~l~~~g~------------~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 72 (431)
T 1q1r_A 5 DNVVIVGTGLAGVEVAFGLRASGW------------EGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAA 72 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------------CSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHH
T ss_pred CcEEEEcCHHHHHHHHHHHHccCc------------CCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHh
Confidence 689999999999999999998761 14899999864332111 1111112356778
Q ss_pred CCCEEEeC-ceEEEeC--CeEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 81 SGVRLVRG-IVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 81 ~gV~v~~~-~V~~v~~--~~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
.||+++.+ +|+.++. ..|.+++|+++.+|.+|+|+|.+|.
T Consensus 73 ~gv~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p~ 115 (431)
T 1q1r_A 73 QNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPR 115 (431)
T ss_dssp TTEEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC
T ss_pred CCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEcCCCCcc
Confidence 99999998 7999986 4688888989999999999999886
No 113
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.85 E-value=1.2e-08 Score=89.05 Aligned_cols=102 Identities=16% Similarity=0.185 Sum_probs=73.4
Q ss_pred CCCCHHHHcccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCC------------CCCC----C
Q 023375 4 AGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------------LSSF----D 67 (283)
Q Consensus 4 ~~~~~~~~~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~------------l~~~----~ 67 (283)
|....+.-....+|+|||||++|+.+|..|++.+ .+|++||+..+ .|.+ .
T Consensus 6 ~~~~~~~m~~~~dvvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~ 71 (319)
T 3cty_A 6 HAVSSEEKERDFDVVIVGAGAAGFSAAVYAARSG--------------FSVAILDKAVAGGLTAEAPLVENYLGFKSIVG 71 (319)
T ss_dssp --------CCEEEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSTTGGGGGCSCBCCBTTBSSBCH
T ss_pred cccccccccCCCcEEEECcCHHHHHHHHHHHhCC--------------CcEEEEeCCCCCccccccchhhhcCCCcccCH
Confidence 4444443334468999999999999999999876 89999998522 1221 2
Q ss_pred HHHHHHHHHHHHhCCCEEEeCceEEEe--CC--eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 68 DRLRHYATTQLSKSGVRLVRGIVKDVD--SQ--KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 68 ~~~~~~~~~~l~~~gV~v~~~~V~~v~--~~--~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
.++..++.+.+++.|++++.++|++++ .+ .|.+ +++++.+|.+|+|+|..|.
T Consensus 72 ~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 72 SELAKLFADHAANYAKIREGVEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHK 127 (319)
T ss_dssp HHHHHHHHHHHHTTSEEEETCCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEEeeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcc
Confidence 466777788888899999887787775 34 3544 6678999999999998765
No 114
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.84 E-value=1.7e-09 Score=98.12 Aligned_cols=95 Identities=17% Similarity=0.268 Sum_probs=72.8
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCC-C--CCC---------CCHHHHHHHHHHHHhCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-I--LSS---------FDDRLRHYATTQLSKSG 82 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~-~--l~~---------~~~~~~~~~~~~l~~~g 82 (283)
++|+|||||++|+++|..|++... .+.+|+|||++. + .|. ..+++...+.+.+++.|
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~-----------~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 70 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG-----------SKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKG 70 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG-----------GGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGT
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC-----------CCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCC
Confidence 589999999999999999998210 118999999863 2 111 12234445667778899
Q ss_pred CEEEeCceEEEeCC--eEEEcCCc----EEEeeEEEEcCCCCCc
Q 023375 83 VRLVRGIVKDVDSQ--KLILNDGT----EVPYGLLVWSTGVGPS 120 (283)
Q Consensus 83 V~v~~~~V~~v~~~--~v~~~~g~----~i~~d~vi~a~G~~~~ 120 (283)
|+++.++|++++.+ .|++++++ ++.+|.||+|+|.+|+
T Consensus 71 v~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~ 114 (409)
T 3h8l_A 71 IQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLA 114 (409)
T ss_dssp CEEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEEC
T ss_pred eEEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcC
Confidence 99998899999865 78887775 3999999999999876
No 115
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.84 E-value=4.3e-08 Score=87.88 Aligned_cols=93 Identities=24% Similarity=0.255 Sum_probs=75.5
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCC---------------------------
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS--------------------------- 65 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~--------------------------- 65 (283)
..+|+|||||++|+.+|..|++.+ .+|+|+|+. ...+.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G--------------~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~ 76 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNG--------------WDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGS 76 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC--------------CCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhC
Confidence 468999999999999999999887 899999986 32110
Q ss_pred -----------------C-----------CHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC-eEEEcCCcEEEeeEEEEcC
Q 023375 66 -----------------F-----------DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-KLILNDGTEVPYGLLVWST 115 (283)
Q Consensus 66 -----------------~-----------~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~-~v~~~~g~~i~~d~vi~a~ 115 (283)
+ ...+.+.+.+.+.+.||+++.+ +|++++.+ .|++.+|+++.+|.||.|+
T Consensus 77 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g~~~~ad~vV~Ad 156 (379)
T 3alj_A 77 HTPPTYETWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGAD 156 (379)
T ss_dssp BCCSCEEEEETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTTEEEETTSCEEECSEEEECC
T ss_pred CCccceEEEeCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCCEEEECCCCEEEcCEEEECC
Confidence 0 0345667777888889999999 89888644 6778889899999999999
Q ss_pred CCCCc
Q 023375 116 GVGPS 120 (283)
Q Consensus 116 G~~~~ 120 (283)
|..+.
T Consensus 157 G~~s~ 161 (379)
T 3alj_A 157 GVGSK 161 (379)
T ss_dssp CTTCH
T ss_pred CccHH
Confidence 98775
No 116
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.84 E-value=1.3e-08 Score=88.32 Aligned_cols=92 Identities=16% Similarity=0.201 Sum_probs=74.1
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC---CCC--------CC----CCHHHHHHHHHHHH
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN---EIL--------SS----FDDRLRHYATTQLS 79 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~---~~l--------~~----~~~~~~~~~~~~l~ 79 (283)
.+|+|||||++|+.+|..|++.+ .+|++|++. ... +. ..+.+..++.+.++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g--------------~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKG--------------IRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVD 67 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT--------------CCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHH
Confidence 37999999999999999999876 889999752 111 11 12467788888899
Q ss_pred hCCCEEEeC-ceEEEeCC-------eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 80 KSGVRLVRG-IVKDVDSQ-------KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 80 ~~gV~v~~~-~V~~v~~~-------~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
+.|++++.+ +|++++.+ .|.+++|+++.+|.+|+|+|..|.
T Consensus 68 ~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~ 116 (310)
T 1fl2_A 68 EYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWR 116 (310)
T ss_dssp TSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcC
Confidence 999999999 89999642 467778889999999999998765
No 117
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.81 E-value=2.5e-08 Score=92.94 Aligned_cols=94 Identities=21% Similarity=0.310 Sum_probs=74.3
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCC-----CC-------------------
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-----FD------------------- 67 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~-----~~------------------- 67 (283)
...+|+|||||++|+++|..|++.+ .+|+|||+. .+... .+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G--------------~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 156 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLG--------------ARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFC 156 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTT
T ss_pred CCCCEEEECccHHHHHHHHHHHHCC--------------CeEEEEEeccccCCCCcccCChhHHHHHHHcCCcccccccc
Confidence 4578999999999999999999887 899999986 33110 01
Q ss_pred ---------HHHHHHHHHHHHhCCCEEEeC-ceEEEeCC-------eEEE--c-CC--cEEEeeEEEEcCCCCCc
Q 023375 68 ---------DRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-------KLIL--N-DG--TEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 68 ---------~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~-------~v~~--~-~g--~~i~~d~vi~a~G~~~~ 120 (283)
..+.+.+.+.+++.||+++.+ +|++++.+ .|++ . +| +++.+|.||.|+|..+.
T Consensus 157 ~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 157 TGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp CTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred ccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 456667778888899999999 89998742 4566 3 55 47999999999999876
No 118
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.81 E-value=2e-08 Score=88.39 Aligned_cols=93 Identities=18% Similarity=0.238 Sum_probs=75.1
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCC------------CCCC-----CHHHHHHHHH
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------------LSSF-----DDRLRHYATT 76 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~------------l~~~-----~~~~~~~~~~ 76 (283)
..+|+|||||++|+.+|..|++.+ .+|++||+..+ .|.+ .+++..++.+
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 79 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQ--------------LAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMRE 79 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTT--------------CCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHH
Confidence 468999999999999999999876 88999986321 1222 2567788888
Q ss_pred HHHhCCCEEEeCceEEEeCC---eE-EEcCCcEEEeeEEEEcCCCCCc
Q 023375 77 QLSKSGVRLVRGIVKDVDSQ---KL-ILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 77 ~l~~~gV~v~~~~V~~v~~~---~v-~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
.+++.|++++.+.|.+++.+ .| .+++++++.+|.+|+|+|..|.
T Consensus 80 ~~~~~~v~~~~~~v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~ 127 (335)
T 2a87_A 80 QALRFGADLRMEDVESVSLHGPLKSVVTADGQTHRARAVILAMGAAAR 127 (335)
T ss_dssp HHHHTTCEEECCCEEEEECSSSSEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HHHHcCCEEEEeeEEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCcc
Confidence 88899999998888888752 46 6778889999999999998765
No 119
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.81 E-value=1.2e-08 Score=92.83 Aligned_cols=96 Identities=24% Similarity=0.348 Sum_probs=74.8
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCC--------------CHHHHHHHHHHH
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSF--------------DDRLRHYATTQL 78 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~--------------~~~~~~~~~~~l 78 (283)
...+|+|||||++|+.+|..|++.+.. .+|++|++...+|.. ...+.....+.+
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~------------~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~ 75 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFE------------GRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFW 75 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC------------SCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHH
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcC------------CCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHH
Confidence 346899999999999999999987621 459999986322211 122223345667
Q ss_pred HhCCCEEEeC-ceEEEeCC--eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 79 SKSGVRLVRG-IVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 79 ~~~gV~v~~~-~V~~v~~~--~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
.+.||+++.+ +|+.++.+ .|.+.+|+++.+|.+|+|||.+|.
T Consensus 76 ~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~~~ 120 (415)
T 3lxd_A 76 EDKAVEMKLGAEVVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPR 120 (415)
T ss_dssp HHTTEEEEETCCEEEEETTTTEEEETTSCEEEEEEEEECCCEECC
T ss_pred HHCCcEEEeCCEEEEEECCCCEEEECCCCEEEeeEEEEccCCccC
Confidence 8899999999 89999875 688889999999999999998876
No 120
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.80 E-value=3.2e-08 Score=85.95 Aligned_cols=92 Identities=23% Similarity=0.316 Sum_probs=73.4
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCC-----------------CCCC-----CHHHHH
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-----------------LSSF-----DDRLRH 72 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~-----------------l~~~-----~~~~~~ 72 (283)
..|+||||||+|+.+|..+++.+ .+|++||+... .|.+ ++++..
T Consensus 5 yDvvIIG~GpAGl~AA~~la~~g--------------~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~ 70 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGRSS--------------LKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMM 70 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHCC--------------CCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHH
Confidence 47999999999999999999887 89999997421 0122 256778
Q ss_pred HHHHHHHhCCCEEEeCceEEEeCC----eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 73 YATTQLSKSGVRLVRGIVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 73 ~~~~~l~~~gV~v~~~~V~~v~~~----~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
...+.+++.++++....+..+..+ .+.+.++.++.+|.+|+|||.+|.
T Consensus 71 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~ 122 (314)
T 4a5l_A 71 NMRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAK 122 (314)
T ss_dssp HHHHHHHHTTCEEECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEEC
T ss_pred HHHHHHhhcCcEEEEeEEEEeecCCCceEEEECCCeEEEEeEEEEccccccc
Confidence 888889999999988866655443 466678899999999999999875
No 121
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.80 E-value=8e-09 Score=93.60 Aligned_cols=94 Identities=22% Similarity=0.354 Sum_probs=72.9
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCC--------------CHHHHHHHHHHHHh
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSF--------------DDRLRHYATTQLSK 80 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~--------------~~~~~~~~~~~l~~ 80 (283)
++|+|||||++|+.+|..|++.+. ..+|++|++...+|.. ...+.....+.+.+
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~------------~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 69 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKY------------PGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQD 69 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC------------CSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHH
T ss_pred CCEEEEcChHHHHHHHHHHHhhCc------------CCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHh
Confidence 589999999999999999998762 1489999986432211 11122234566778
Q ss_pred CCCEEEeCceEEEeCC--eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 81 SGVRLVRGIVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 81 ~gV~v~~~~V~~v~~~--~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
.+|+++..+|++++.+ .|.+.+|+++.+|.+|+|||.+|.
T Consensus 70 ~~i~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~ 111 (404)
T 3fg2_P 70 QAIELISDRMVSIDREGRKLLLASGTAIEYGHLVLATGARNR 111 (404)
T ss_dssp TTEEEECCCEEEEETTTTEEEESSSCEEECSEEEECCCEEEC
T ss_pred CCCEEEEEEEEEEECCCCEEEECCCCEEECCEEEEeeCCCcc
Confidence 9999998778888865 688899999999999999998775
No 122
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.80 E-value=2.7e-09 Score=97.58 Aligned_cols=94 Identities=22% Similarity=0.400 Sum_probs=71.6
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCC---CCC---------CHHHHHHHHHHHHhCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---SSF---------DDRLRHYATTQLSKSG 82 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l---~~~---------~~~~~~~~~~~l~~~g 82 (283)
++|+|||||++|+++|..|+++.. +.+|+|||++... +.+ .+++...+.+.+++.|
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~------------g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g 70 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMP------------DLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN 70 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT------------TCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT
T ss_pred CCEEEECccHHHHHHHHHHHcCCC------------CCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcC
Confidence 589999999999999999998321 2899999997322 111 1111222334566789
Q ss_pred CEEEeCceEEEeCC--eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 83 VRLVRGIVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 83 V~v~~~~V~~v~~~--~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
|+++.++|+.++.+ .|.+++++++.+|.+|+|+|.+++
T Consensus 71 v~~~~~~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~ 110 (430)
T 3h28_A 71 IEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp EEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEE
T ss_pred CEEEEEEEEEEECCCCEEEECCCcEEECCEEEEcCCcccc
Confidence 99998889999875 688889999999999999999876
No 123
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.80 E-value=2.2e-08 Score=86.98 Aligned_cols=92 Identities=18% Similarity=0.293 Sum_probs=68.7
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCC-------CC-------CCHHHHHHHHHHHHh
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL-------SS-------FDDRLRHYATTQLSK 80 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l-------~~-------~~~~~~~~~~~~l~~ 80 (283)
-.|+||||||+|+.+|..+++.+ .+|+|||++... |. .++++.+...+.+.+
T Consensus 7 yDVvIIGaGpAGlsAA~~lar~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (304)
T 4fk1_A 7 IDCAVIGAGPAGLNASLVLGRAR--------------KQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMK 72 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTT
T ss_pred cCEEEECCCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHh
Confidence 47999999999999999999877 899999975321 11 234566666666666
Q ss_pred CC-CEEEeCceEEEeC---C--eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 81 SG-VRLVRGIVKDVDS---Q--KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 81 ~g-V~v~~~~V~~v~~---~--~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
.+ +.++...+..+.. + .+.+.+|+++.+|.||+|||.+|.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~ 118 (304)
T 4fk1_A 73 YPSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEE 118 (304)
T ss_dssp STTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEE
T ss_pred cCCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCccc
Confidence 65 5556555555432 1 577889999999999999999876
No 124
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.79 E-value=5.3e-08 Score=86.50 Aligned_cols=92 Identities=15% Similarity=0.295 Sum_probs=71.1
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCcc-EEEEEeCCCC--------------CCC--------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANEI--------------LSS-------------- 65 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~-~V~li~~~~~--------------l~~-------------- 65 (283)
.+|+|||||++|+.+|..|++.+ . +|+|||+..+ .+.
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g--------------~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 70 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFG--------------ITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAI 70 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCS
T ss_pred CcEEEECcCHHHHHHHHHHHHcC--------------CCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhc
Confidence 57999999999999999999876 6 8999997530 000
Q ss_pred --------------C-CHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC----eEEEcCCcEEEeeEEEEcCCCCCch
Q 023375 66 --------------F-DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPST 121 (283)
Q Consensus 66 --------------~-~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~----~v~~~~g~~i~~d~vi~a~G~~~~~ 121 (283)
. ...+..++.+.+++.|++++.+ +|++++.+ .|.+.++ ++.+|.||+|+|..+.+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~p 145 (369)
T 3d1c_A 71 SMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNFP 145 (369)
T ss_dssp STTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTSB
T ss_pred cccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCcc
Confidence 0 1345666777788899999998 79888754 3555565 69999999999997653
No 125
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.78 E-value=2e-08 Score=94.36 Aligned_cols=102 Identities=17% Similarity=0.224 Sum_probs=78.6
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CC-------------------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EI------------------------------- 62 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~------------------------------- 62 (283)
.+|+|||||++|+.+|..|++.+ .+|+|+|++ .+
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~~G--------------~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~ 173 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQMG--------------FNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGT 173 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHHTT--------------CCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGT
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CeEEEEEccCcccccccchhcccccccccccccceeccCCccc
Confidence 68999999999999999999877 889999976 21
Q ss_pred -----C------C--------------------------CC----CHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC----
Q 023375 63 -----L------S--------------------------SF----DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ---- 96 (283)
Q Consensus 63 -----l------~--------------------------~~----~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~---- 96 (283)
+ + .. ...+.+.+.+.+++.|++++.+ +|+++..+
T Consensus 174 ~sdgkl~~~i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v 253 (549)
T 3nlc_A 174 FSDGKLYSQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQI 253 (549)
T ss_dssp TSCCCCCCCSCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBE
T ss_pred ccCCceEEEeccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEE
Confidence 0 0 00 0445566777788899999999 89988532
Q ss_pred -eEEEcCCcEEEeeEEEEcCCCCCch---hhhccCCCC
Q 023375 97 -KLILNDGTEVPYGLLVWSTGVGPST---LVKSLDLPK 130 (283)
Q Consensus 97 -~v~~~~g~~i~~d~vi~a~G~~~~~---~~~~~~l~~ 130 (283)
.|++.+|+++.+|.||+|+|..+.+ .+...+++.
T Consensus 254 ~gV~l~~G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~~ 291 (549)
T 3nlc_A 254 TGVTLSNGEEIKSRHVVLAVGHSARDTFEMLHERGVYM 291 (549)
T ss_dssp EEEEETTSCEEECSCEEECCCTTCHHHHHHHHHTTCCC
T ss_pred EEEEECCCCEEECCEEEECCCCChhhHHHHHHHcCCCc
Confidence 3778889999999999999999863 344445543
No 126
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.78 E-value=1.5e-07 Score=83.99 Aligned_cols=90 Identities=21% Similarity=0.322 Sum_probs=63.5
Q ss_pred eEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCC-----------------------------
Q 023375 16 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS----------------------------- 65 (283)
Q Consensus 16 ~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~----------------------------- 65 (283)
.|+||||||+|+.+|..|++.+ .+|+|+|+. .+-..
T Consensus 6 DViIVGaGpaGl~~A~~La~~G--------------~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~ 71 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYG--------------LKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVK 71 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEES
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccc
Confidence 6999999999999999999987 777777763 22000
Q ss_pred ---------------------------C-CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--CeE---EE-cCC--cEEEe
Q 023375 66 ---------------------------F-DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QKL---IL-NDG--TEVPY 108 (283)
Q Consensus 66 ---------------------------~-~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~~v---~~-~~g--~~i~~ 108 (283)
+ ...+...+.+...+.|++++.+ +++++.. +.+ .. .++ .++.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a 151 (397)
T 3oz2_A 72 GARIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRA 151 (397)
T ss_dssp EEEEECTTCSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred eEEEEeCCCceEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEE
Confidence 0 1234555666677889999998 7876643 332 22 233 36899
Q ss_pred eEEEEcCCCCC
Q 023375 109 GLLVWSTGVGP 119 (283)
Q Consensus 109 d~vi~a~G~~~ 119 (283)
|.||-|.|...
T Consensus 152 ~~vIgAdG~~S 162 (397)
T 3oz2_A 152 KMVIAADGFES 162 (397)
T ss_dssp EEEEECCCTTC
T ss_pred eEEEeCCcccc
Confidence 99999999754
No 127
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.77 E-value=1.5e-08 Score=91.97 Aligned_cols=96 Identities=26% Similarity=0.364 Sum_probs=71.7
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCC----CCHHHH-HHHHH-----HHHhCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS----FDDRLR-HYATT-----QLSKSG 82 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~----~~~~~~-~~~~~-----~l~~~g 82 (283)
...+|+|||||++|+.+|..|++.+. ..+|++|++...++. ++..+. ....+ .+++.|
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~------------~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGY------------QGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKRAPE 73 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTC------------CSCEEEEESSCSCCBCSGGGGTHHHHHCCGGGSBCCCTTSCS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCC------------CCeEEEEECCCCCcccCCCCCHHHhCCCchhhhhHHHHHHCC
Confidence 34689999999999999999998762 147999999743332 222111 10000 355779
Q ss_pred CEEEeC-ceEEEeCC--eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 83 VRLVRG-IVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 83 V~v~~~-~V~~v~~~--~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
|+++.+ +|+.++.+ .|++++|+++.+|.+|+|||.+|.
T Consensus 74 v~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~~~ 114 (408)
T 2gqw_A 74 VEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPR 114 (408)
T ss_dssp CEEEETCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC
T ss_pred CEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCC
Confidence 999999 69999864 688888989999999999999876
No 128
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.75 E-value=5.2e-08 Score=84.86 Aligned_cols=92 Identities=18% Similarity=0.195 Sum_probs=73.7
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCC------------CCCC-----CHHHHHHHHHH
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------------LSSF-----DDRLRHYATTQ 77 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~------------l~~~-----~~~~~~~~~~~ 77 (283)
.+|+|||||++|+.+|..|++.+ .+|+++|+..+ .|.+ .+++.+++.+.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARAN--------------LQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEH 71 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT--------------CCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHH
Confidence 58999999999999999999876 88999986321 1222 25677788888
Q ss_pred HHhCCCEEEeCceEEEeCC--eEE-EcCCcEEEeeEEEEcCCCCCc
Q 023375 78 LSKSGVRLVRGIVKDVDSQ--KLI-LNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 78 l~~~gV~v~~~~V~~v~~~--~v~-~~~g~~i~~d~vi~a~G~~~~ 120 (283)
+++.|++++.++++.++.+ .+. +.+++++.+|.+|+|+|..|.
T Consensus 72 ~~~~~~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~ 117 (320)
T 1trb_A 72 ATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASAR 117 (320)
T ss_dssp HHHTTCEEECCCEEEEECSSSSEEEEESSCEEEEEEEEECCCEEEC
T ss_pred HHHCCCEEEEeeeeEEEecCCEEEEEeCCCEEEcCEEEECCCCCcC
Confidence 8999999998888888753 333 567889999999999998765
No 129
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.75 E-value=9e-08 Score=90.21 Aligned_cols=94 Identities=19% Similarity=0.227 Sum_probs=74.7
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCC--------CC-------------C----
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL--------SS-------------F---- 66 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l--------~~-------------~---- 66 (283)
...+|+|||||++|+.+|..|++.+ .+|+|||+. .+. |. +
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G--------------~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~ 85 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQG--------------LTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPEL 85 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHH
T ss_pred CCCCEEEECchHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCccccCCCCCceeCCCchhccccccccc
Confidence 3468999999999999999999866 899999984 221 00 1
Q ss_pred ------------CHHHHHHHHHHHHhCCC--EEEeC-ceEEEe--CC----eEEEcCCcEEEeeEEEEcCC--CCCc
Q 023375 67 ------------DDRLRHYATTQLSKSGV--RLVRG-IVKDVD--SQ----KLILNDGTEVPYGLLVWSTG--VGPS 120 (283)
Q Consensus 67 ------------~~~~~~~~~~~l~~~gV--~v~~~-~V~~v~--~~----~v~~~~g~~i~~d~vi~a~G--~~~~ 120 (283)
.+++.+++.+..++.|+ +++.+ +|++++ ++ .|++++|+++.||.||+|+| ..|.
T Consensus 86 ~~~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~ 162 (549)
T 4ap3_A 86 EQEWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNAN 162 (549)
T ss_dssp HHHCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECC
T ss_pred ccCCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCC
Confidence 24677888888899998 78888 888874 34 68888999999999999999 4444
No 130
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.73 E-value=3.3e-08 Score=86.63 Aligned_cols=92 Identities=18% Similarity=0.218 Sum_probs=73.5
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeC----C-CC------------CCCC-----CHHHH
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA----N-EI------------LSSF-----DDRLR 71 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~----~-~~------------l~~~-----~~~~~ 71 (283)
..+|+|||||++|+.+|..|++.+ .+|++||+ . .+ .|.+ ..++.
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g--------------~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~ 73 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAE--------------LKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELT 73 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--------------CCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC--------------CeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHH
Confidence 358999999999999999999876 89999998 2 21 1222 24677
Q ss_pred HHHHHHHHhCCCEEEeCceEEEeCC----eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 72 HYATTQLSKSGVRLVRGIVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 72 ~~~~~~l~~~gV~v~~~~V~~v~~~----~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
..+.+.+++.|++++.++|.+++.+ .|++ +++++.+|.+|+|+|..|.
T Consensus 74 ~~l~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~ 125 (333)
T 1vdc_A 74 DKFRKQSERFGTTIFTETVTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAK 125 (333)
T ss_dssp HHHHHHHHHTTCEEECCCCCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHCCCEEEEeEEEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcC
Confidence 7788888899999998888888653 3555 7788999999999999865
No 131
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.72 E-value=3e-08 Score=91.10 Aligned_cols=95 Identities=26% Similarity=0.437 Sum_probs=67.2
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCC-------CCC------CHHHHHHHHHHH-H
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL-------SSF------DDRLRHYATTQL-S 79 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l-------~~~------~~~~~~~~~~~l-~ 79 (283)
.++|+|||||++|+.+|..|++... +.+|++||+.... |.+ ...+..+..+.+ +
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~------------~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 70 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKP------------EWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIK 70 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCT------------TSEEEEECSSSCCC------------------------CTHHH
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCc------------CCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHH
Confidence 3689999999999999999998731 2899999987422 111 111222222334 6
Q ss_pred hCCCEEEeC-ceEEEeCCe--EEEcCC-cEEEeeEEEEcCCCCCc
Q 023375 80 KSGVRLVRG-IVKDVDSQK--LILNDG-TEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 80 ~~gV~v~~~-~V~~v~~~~--v~~~~g-~~i~~d~vi~a~G~~~~ 120 (283)
+.||+++.+ +|++++.+. +.+.++ .++.+|.+|+|||.+|.
T Consensus 71 ~~gi~v~~~~~v~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~ 115 (449)
T 3kd9_A 71 KRGIDLHLNAEVIEVDTGYVRVRENGGEKSYEWDYLVFANGASPQ 115 (449)
T ss_dssp HTTCEEETTCEEEEECSSEEEEECSSSEEEEECSEEEECCCEEEC
T ss_pred hcCcEEEecCEEEEEecCCCEEEECCceEEEEcCEEEECCCCCCC
Confidence 789999999 899998764 555566 47999999999998776
No 132
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.71 E-value=5.5e-08 Score=91.10 Aligned_cols=94 Identities=15% Similarity=0.209 Sum_probs=76.2
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC---CCC-----------C-CCCHHHHHHHHHH
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN---EIL-----------S-SFDDRLRHYATTQ 77 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~---~~l-----------~-~~~~~~~~~~~~~ 77 (283)
...+|+|||||++|+.+|..|++.+ .+|++++.. ... + ...+++..++.+.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G--------------~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 276 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKG--------------IRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAH 276 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHH
T ss_pred CcccEEEECCcHHHHHHHHHHHhCC--------------CeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHH
Confidence 3468999999999999999999876 889999752 111 0 1235778888888
Q ss_pred HHhCCCEEEeC-ceEEEeCC-------eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 78 LSKSGVRLVRG-IVKDVDSQ-------KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 78 l~~~gV~v~~~-~V~~v~~~-------~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
+++.||+++.+ +|++++.+ .|.+++|+++.+|.+|+|+|..|.
T Consensus 277 ~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 277 VSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWR 327 (521)
T ss_dssp HHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcC
Confidence 99999999999 89999642 477788889999999999998765
No 133
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.70 E-value=7.7e-08 Score=87.64 Aligned_cols=91 Identities=19% Similarity=0.262 Sum_probs=71.4
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCC---------------------------CC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS---------------------------SF 66 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~---------------------------~~ 66 (283)
.+|+|||||++|+.+|..|++.+ .+|+|+|+. .+.. .+
T Consensus 28 ~dViIIGgG~AGl~aA~~La~~G--------------~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~ 93 (417)
T 3v76_A 28 QDVVIIGAGAAGMMCAIEAGKRG--------------RRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHF 93 (417)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHH
Confidence 58999999999999999999887 899999986 3210 00
Q ss_pred -------------------------------------CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--C--eEEEcCCc
Q 023375 67 -------------------------------------DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q--KLILNDGT 104 (283)
Q Consensus 67 -------------------------------------~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~--~v~~~~g~ 104 (283)
...+.+.+.+.+++.||+++++ +|+++.. + .|.+.+|
T Consensus 94 ~~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g- 172 (417)
T 3v76_A 94 CKSALARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG- 172 (417)
T ss_dssp THHHHHHSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-
T ss_pred HHHHHHhcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-
Confidence 1245666777788889999999 8988853 3 3556666
Q ss_pred EEEeeEEEEcCCCCCc
Q 023375 105 EVPYGLLVWSTGVGPS 120 (283)
Q Consensus 105 ~i~~d~vi~a~G~~~~ 120 (283)
++.+|.||+|+|..+.
T Consensus 173 ~i~ad~VIlAtG~~S~ 188 (417)
T 3v76_A 173 TVDAASLVVASGGKSI 188 (417)
T ss_dssp EEEESEEEECCCCSSC
T ss_pred EEEeeEEEECCCCccC
Confidence 8999999999999873
No 134
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.69 E-value=5.3e-08 Score=87.16 Aligned_cols=92 Identities=32% Similarity=0.472 Sum_probs=68.6
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCC-------------HHHHHHHHHHHH
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFD-------------DRLRHYATTQLS 79 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~-------------~~~~~~~~~~l~ 79 (283)
...+++|||||+.|+.+|..|++. + +|+|||++...+... +++.....+.++
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~--------------g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~ 71 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQT--------------Y-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYR 71 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTT--------------S-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHH
T ss_pred CCCcEEEECCcHHHHHHHHHHhhc--------------C-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHH
Confidence 346899999999999999999643 3 899999874322111 111122345677
Q ss_pred hCCCEEEeC-ceEEEeCC--eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 80 KSGVRLVRG-IVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 80 ~~gV~v~~~-~V~~v~~~--~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
+.||+++.+ +|+.++.+ .|+ .+|+++.+|.+|+|||.+|.
T Consensus 72 ~~~v~~~~g~~v~~id~~~~~V~-~~g~~~~~d~lViATGs~p~ 114 (367)
T 1xhc_A 72 KRGIEIRLAEEAKLIDRGRKVVI-TEKGEVPYDTLVLATGARAR 114 (367)
T ss_dssp HHTEEEECSCCEEEEETTTTEEE-ESSCEEECSEEEECCCEEEC
T ss_pred hCCcEEEECCEEEEEECCCCEEE-ECCcEEECCEEEECCCCCCC
Confidence 889999999 79999875 465 67889999999999999876
No 135
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.69 E-value=1.2e-07 Score=82.49 Aligned_cols=92 Identities=21% Similarity=0.214 Sum_probs=71.3
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCC------------CCC----CHHHHHHHHHHH
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL------------SSF----DDRLRHYATTQL 78 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l------------~~~----~~~~~~~~~~~l 78 (283)
-.|+||||||+|+.+|..|++.+ .+|+|||++.+. |.+ .+++........
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~~g--------------~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~ 72 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASRAN--------------LKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHA 72 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHH
Confidence 36999999999999999999887 899999975321 211 256777777788
Q ss_pred HhCCCEEEeC-ceEEEeC--CeEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 79 SKSGVRLVRG-IVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 79 ~~~gV~v~~~-~V~~v~~--~~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
.+.++.+..+ .+..... ..+...+++++.+|.+|+|||.+|.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~ 117 (312)
T 4gcm_A 73 KKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYK 117 (312)
T ss_dssp HHTTCEEEECCCCEEEECSSCEEEECSSCEEEEEEEEECCCEEEC
T ss_pred hhccccccceeeeeeeeeecceeeccCCeEEEeceeEEcccCccC
Confidence 8888888877 4443333 3566678889999999999999876
No 136
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.68 E-value=6.4e-08 Score=89.29 Aligned_cols=92 Identities=22% Similarity=0.407 Sum_probs=70.5
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCC-----------------------------
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS----------------------------- 64 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~----------------------------- 64 (283)
..+|+|||||++|+.+|..|++.+ .+|+|||++.+..
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g--------------~~V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~ 69 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFG--------------KRVALIESKALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGF 69 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred cCcEEEECCCHHHHHHHHHHHhCC--------------CcEEEEcCCCCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhc
Confidence 358999999999999999999876 8999999874310
Q ss_pred -------CCC-H-----------HHHHHHHHHHHhCCCEEEeCceEEEeCCeEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 65 -------SFD-D-----------RLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 65 -------~~~-~-----------~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
..+ + .+...+.+.+++.||+++.+++..++...|.+ +|+++.+|.+|+|||.+|.
T Consensus 70 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~-~g~~~~~d~lviAtGs~p~ 143 (463)
T 2r9z_A 70 GVQASGGTLDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAHTIEV-EGQRLSADHIVIATGGRPI 143 (463)
T ss_dssp TBCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEE-TTEEEEEEEEEECCCEEEC
T ss_pred CcccCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCCEEEE-CCEEEEcCEEEECCCCCCC
Confidence 001 0 11122344557789999999777788888888 7788999999999998876
No 137
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.68 E-value=1.5e-07 Score=85.28 Aligned_cols=91 Identities=18% Similarity=0.253 Sum_probs=70.6
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCC-----------------CC-----------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL-----------------SS----------- 65 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l-----------------~~----------- 65 (283)
.+|+|||||++|+.+|..|++.+ .+|+|+|++ .+. ..
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G--------------~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~ 70 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLG--------------KSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHF 70 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTS
T ss_pred CCEEEECCcHHHHHHHHHHHhCC--------------CCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHH
Confidence 57999999999999999999887 889999876 330 00
Q ss_pred ------------------------------------CCHHHHHHHHHHHHhCCCEEEeC-ceEEEe-C-----Ce--EEE
Q 023375 66 ------------------------------------FDDRLRHYATTQLSKSGVRLVRG-IVKDVD-S-----QK--LIL 100 (283)
Q Consensus 66 ------------------------------------~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~-~-----~~--v~~ 100 (283)
....+.+.+.+.+++.||+++++ +|+++. . +. |.+
T Consensus 71 ~~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~ 150 (401)
T 2gqf_A 71 VKSALARYTNWDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQV 150 (401)
T ss_dssp THHHHHHSCHHHHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEE
T ss_pred HHHHHHhCCHHHHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEE
Confidence 12345566777788899999999 898886 3 32 445
Q ss_pred cCCcEEEeeEEEEcCCCCCc
Q 023375 101 NDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 101 ~~g~~i~~d~vi~a~G~~~~ 120 (283)
.++ ++.+|.||+|+|..+.
T Consensus 151 ~~g-~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 151 NST-QWQCKNLIVATGGLSM 169 (401)
T ss_dssp TTE-EEEESEEEECCCCSSC
T ss_pred CCC-EEECCEEEECCCCccC
Confidence 555 7999999999999984
No 138
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.67 E-value=1.6e-07 Score=86.63 Aligned_cols=92 Identities=20% Similarity=0.366 Sum_probs=69.6
Q ss_pred CeEEEEccCcHHHHHHHHHHH---hhhhHHHhhcCCCCCccE---EEEEeCC-CCC------------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSD---FIMRDVRQRYSHVKDYIH---VTLIEAN-EIL------------------------ 63 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~---~~~~~~~~~~~~~~~~~~---V~li~~~-~~l------------------------ 63 (283)
++|+|||||++|+.+|..|++ .+ .+ |++||+. .+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G--------------~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~ 68 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKG--------------AEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYR 68 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTT--------------CCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcC--------------CCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCcccc
Confidence 589999999999999999998 54 66 9999986 321
Q ss_pred -------------CCC---------------CHHHHHHHHHHHHhCCCE--EEeC-ceEEEe--CC----eEEEcC---C
Q 023375 64 -------------SSF---------------DDRLRHYATTQLSKSGVR--LVRG-IVKDVD--SQ----KLILND---G 103 (283)
Q Consensus 64 -------------~~~---------------~~~~~~~~~~~l~~~gV~--v~~~-~V~~v~--~~----~v~~~~---g 103 (283)
+.+ ...+.+++.+.+++.|++ ++.+ +|++++ ++ .|++.+ |
T Consensus 69 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g 148 (464)
T 2xve_A 69 YLWSNGPKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTD 148 (464)
T ss_dssp TCBCSSCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTT
T ss_pred chhhcCChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCC
Confidence 000 145667777888888998 8888 788885 33 566654 4
Q ss_pred --cEEEeeEEEEcCC--CCCc
Q 023375 104 --TEVPYGLLVWSTG--VGPS 120 (283)
Q Consensus 104 --~~i~~d~vi~a~G--~~~~ 120 (283)
+++.+|.||+|+| ..|+
T Consensus 149 ~~~~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 149 TIYSEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp EEEEEEESEEEECCCSSSSBC
T ss_pred ceEEEEcCEEEECCCCCCCCc
Confidence 5789999999999 5665
No 139
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.67 E-value=2e-07 Score=87.60 Aligned_cols=90 Identities=13% Similarity=0.177 Sum_probs=72.4
Q ss_pred cCeEEEEccCcHHHHHHHHHH-HhhhhHHHhhcCCCCCccEEEEEeCC-CCC--------CCC-----------------
Q 023375 14 LLHCVVVGGGPTGVEFSGELS-DFIMRDVRQRYSHVKDYIHVTLIEAN-EIL--------SSF----------------- 66 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~-~~~~~~~~~~~~~~~~~~~V~li~~~-~~l--------~~~----------------- 66 (283)
..+|+|||||++|+.+|..|+ +.+ .+|+|||+. .+. |..
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G--------------~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~ 73 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELG--------------LTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDL 73 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC--------------CCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCC--------------CCEEEEECCCCCCCcccccCCCCceecCCcceeeecccccc
Confidence 358999999999999999999 665 899999985 321 111
Q ss_pred ------------CHHHHHHHHHHHHhCCC--EEEeC-ceEEEe--CC----eEEEcCCcEEEeeEEEEcCCC
Q 023375 67 ------------DDRLRHYATTQLSKSGV--RLVRG-IVKDVD--SQ----KLILNDGTEVPYGLLVWSTGV 117 (283)
Q Consensus 67 ------------~~~~~~~~~~~l~~~gV--~v~~~-~V~~v~--~~----~v~~~~g~~i~~d~vi~a~G~ 117 (283)
.+++.+++.+..++.|+ +++.+ +|++++ ++ .|++++|+++.+|.||+|+|.
T Consensus 74 ~~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 74 LQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGL 145 (540)
T ss_dssp HHHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCS
T ss_pred ccCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcc
Confidence 24677888888889998 78888 788875 33 578889999999999999995
No 140
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.67 E-value=4.3e-08 Score=90.09 Aligned_cols=94 Identities=16% Similarity=0.254 Sum_probs=69.0
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCC----CCC----------HHHHHHHHHHHHh
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS----SFD----------DRLRHYATTQLSK 80 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~----~~~----------~~~~~~~~~~l~~ 80 (283)
++|+|||||++|+.+|..|++..+ +.+|++||++...+ .+. ..+.....+.+.+
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~------------g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYP------------QAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRR 70 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCS------------SSEEEEECSSSCCSSCCC----------------CCCCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhhCc------------CCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHH
Confidence 589999999999999999998731 28999999873221 111 1111113466788
Q ss_pred CCCEEEeC-ceEEEeCC--eEEEc---CCcEEEeeEEEEcCCCCCc
Q 023375 81 SGVRLVRG-IVKDVDSQ--KLILN---DGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 81 ~gV~v~~~-~V~~v~~~--~v~~~---~g~~i~~d~vi~a~G~~~~ 120 (283)
.|++++.+ +|++++.+ .+.+. +++++.+|.+|+|||.+|.
T Consensus 71 ~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~ 116 (452)
T 3oc4_A 71 QKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQF 116 (452)
T ss_dssp TTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCBC
T ss_pred CCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcccC
Confidence 99999988 89999765 45552 5568999999999999886
No 141
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.66 E-value=1e-07 Score=87.59 Aligned_cols=92 Identities=25% Similarity=0.454 Sum_probs=70.4
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCC----------------------------
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS---------------------------- 65 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~---------------------------- 65 (283)
..+|+|||||+.|+.+|..|++.+ .+|+|||++.+...
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g--------------~~V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~ 69 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYG--------------QKCALIEAKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPD 69 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTT--------------CCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGG
T ss_pred cCCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEcCCCCCCcccccCccChHHHHHHHHHHHHHHHHHHh
Confidence 358999999999999999999876 89999998743110
Q ss_pred ---------CC-H-----------HHHHHHHHHHHhCCCEEEeCceEEEeCCeEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 66 ---------FD-D-----------RLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 66 ---------~~-~-----------~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
++ + .+.......+++.||+++.+++..++...|.+ +|+++.+|.+|+|||.+|.
T Consensus 70 ~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~~-~g~~~~~d~lviAtGs~p~ 144 (450)
T 1ges_A 70 YGFDTTINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEV-NGETITADHILIATGGRPS 144 (450)
T ss_dssp GTEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETTEEEE-TTEEEEEEEEEECCCEEEC
T ss_pred cCccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEE-CCEEEEeCEEEECCCCCCC
Confidence 00 0 11122234457789999999777788888888 7788999999999998876
No 142
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.64 E-value=1.5e-07 Score=86.71 Aligned_cols=92 Identities=22% Similarity=0.350 Sum_probs=69.6
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCC---------C--------------------
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---------S-------------------- 64 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l---------~-------------------- 64 (283)
..+|+|||||+.|+.+|..|++.+ .+|+|||++.+. |
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g--------------~~V~lie~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~ 70 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLG--------------IPTVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQASRFTEP 70 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHT--------------CCEEEECSSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCC--------------CEEEEEccCCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccc
Confidence 368999999999999999999876 899999985431 0
Q ss_pred ---CC-------C-HHHH-----------HHHHHHHHhCCCEEEeCceEEEeCCeEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 65 ---SF-------D-DRLR-----------HYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 65 ---~~-------~-~~~~-----------~~~~~~l~~~gV~v~~~~V~~v~~~~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
.+ + +++. ....+.+++.||+++.++...+++..|.+++ +++.+|.+|+|||.+|.
T Consensus 71 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~-~~~~~d~lviATGs~p~ 147 (458)
T 1lvl_A 71 SPLGISVASPRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGKQVEVDG-QRIQCEHLLLATGSSSV 147 (458)
T ss_dssp CTTCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEETTEEEETT-EEEECSEEEECCCEEEC
T ss_pred cccCcccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccCCEEEEee-EEEEeCEEEEeCCCCCC
Confidence 00 1 1111 1234567788999999965557777888876 78999999999999886
No 143
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.64 E-value=1.1e-07 Score=88.17 Aligned_cols=92 Identities=23% Similarity=0.279 Sum_probs=73.6
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCC------------------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------ 64 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~------------------------------ 64 (283)
.+|+|||||++|+.+|..|++.+ .+|+|||++.+..
T Consensus 27 ~DVvVIGgG~aGl~aA~~la~~G--------------~~V~liEk~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g 92 (484)
T 3o0h_A 27 FDLFVIGSGSGGVRAARLAGALG--------------KRVAIAEEYRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFG 92 (484)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred CCEEEECcCHHHHHHHHHHHhCc--------------CEEEEEeCCCCCCceeccCccccHHHHHHHHHHHHHHHHHhCC
Confidence 48999999999999999999987 8999999853211
Q ss_pred ------CCC------------HHHHHHHHHHHHhCCCEEEeCceEEEeCCeEEEc-CCcEEEeeEEEEcCCCCCc
Q 023375 65 ------SFD------------DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILN-DGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 65 ------~~~------------~~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~~-~g~~i~~d~vi~a~G~~~~ 120 (283)
.++ ..+...+...+++.+|+++.+.+..+++..+.+. +++++.+|.+|+|+|..|.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~v~~~~~~~~~d~lviAtG~~p~ 167 (484)
T 3o0h_A 93 WKYADPIFNWEKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELSVTGERISAEKILIATGAKIV 167 (484)
T ss_dssp BCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTTCCEEEEEEEEECCCEEEC
T ss_pred cccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEecCCeEEEeCEEEEccCCCcc
Confidence 000 1233345566778899999998888888888887 7889999999999998776
No 144
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.63 E-value=3.2e-08 Score=92.13 Aligned_cols=96 Identities=21% Similarity=0.341 Sum_probs=69.1
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHH--------H---------
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYA--------T--------- 75 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~--------~--------- 75 (283)
...+|+|||||++|+.+|..|.+... +.+|+||++...++...+.+++.+ .
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~------------g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~ 77 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDP------------GARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWN 77 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHST------------TCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTT
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCC------------CCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccc
Confidence 34689999999999999999987631 289999998743321111000000 0
Q ss_pred -----------H------H---HHhCCCEEEeC-ceEEEeC--CeEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 76 -----------T------Q---LSKSGVRLVRG-IVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 76 -----------~------~---l~~~gV~v~~~-~V~~v~~--~~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
+ . +.+.||+++.+ +|++++. ..|++++|+++.||.+|+|||.+|.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~p~ 145 (493)
T 1m6i_A 78 GKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPR 145 (493)
T ss_dssp SCEEESBSSCGGGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEEEC
T ss_pred cccccccccchHhhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCC
Confidence 0 0 12468999998 8998874 4788999999999999999999886
No 145
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.62 E-value=9.7e-08 Score=87.47 Aligned_cols=93 Identities=15% Similarity=0.183 Sum_probs=66.5
Q ss_pred eEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCC----CCHH-----------HHHHHHHHHHh
Q 023375 16 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS----FDDR-----------LRHYATTQLSK 80 (283)
Q Consensus 16 ~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~----~~~~-----------~~~~~~~~l~~ 80 (283)
||+|||||+.|+.+|..|++++. +.+|+||++++..+. ++.. +....++.+++
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~------------~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDK------------ESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDR 69 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCS------------SSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHhCCC------------CCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHh
Confidence 69999999999999999988763 278999998632211 1000 01112345677
Q ss_pred CCCEEEeC-ceEEEeCC--eEEEcC-----CcEEEeeEEEEcCCCCCc
Q 023375 81 SGVRLVRG-IVKDVDSQ--KLILND-----GTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 81 ~gV~v~~~-~V~~v~~~--~v~~~~-----g~~i~~d~vi~a~G~~~~ 120 (283)
.+|+++.+ +|++++.+ .+.+.+ +.++.||.+|+|||.+|+
T Consensus 70 ~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~ 117 (437)
T 4eqs_A 70 KQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASAN 117 (437)
T ss_dssp HCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEEC
T ss_pred cCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCccc
Confidence 89999998 89999865 344422 246899999999999876
No 146
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.62 E-value=3.1e-07 Score=86.43 Aligned_cols=93 Identities=20% Similarity=0.244 Sum_probs=73.0
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCC--------C--------------------
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL--------S-------------------- 64 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l--------~-------------------- 64 (283)
..+|+|||||++|+.+|..|++.+ .+|+|||++ .+. |
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g--------------~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~ 74 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAG--------------MKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGII 74 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSS
T ss_pred CCCEEEECccHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccc
Confidence 358999999999999999999866 899999986 321 1
Q ss_pred ---C------CCHHHHHHHHHHHHhCCC--EEEeC-ceEEEe--CC----eEEEcCCcEEEeeEEEEcCC--CCCc
Q 023375 65 ---S------FDDRLRHYATTQLSKSGV--RLVRG-IVKDVD--SQ----KLILNDGTEVPYGLLVWSTG--VGPS 120 (283)
Q Consensus 65 ---~------~~~~~~~~~~~~l~~~gV--~v~~~-~V~~v~--~~----~v~~~~g~~i~~d~vi~a~G--~~~~ 120 (283)
. -.+++..++.+..++.|+ +++.+ +|++++ ++ .|++++|+++.||.||+|+| ..|.
T Consensus 75 ~~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~ 150 (545)
T 3uox_A 75 PEWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASR 150 (545)
T ss_dssp TTCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC--
T ss_pred cCCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCc
Confidence 0 125778888888888888 78888 788875 23 67888999999999999999 4554
No 147
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.62 E-value=2e-07 Score=84.01 Aligned_cols=92 Identities=17% Similarity=0.219 Sum_probs=71.1
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCC------------------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL------------------------------ 63 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l------------------------------ 63 (283)
.+|+|||||++|+.+|..|++.+ .+|+|+|+. ...
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G--------------~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~ 72 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQG--------------HRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGG 72 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTC
T ss_pred CCEEEECcCHHHHHHHHHHHhCC--------------CcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCC
Confidence 58999999999999999999876 777777764 220
Q ss_pred -------------------------C-----CCCHHHHHHHHHHHHhC-CCEEEeC-ceEEEeCC------eEEEcCCcE
Q 023375 64 -------------------------S-----SFDDRLRHYATTQLSKS-GVRLVRG-IVKDVDSQ------KLILNDGTE 105 (283)
Q Consensus 64 -------------------------~-----~~~~~~~~~~~~~l~~~-gV~v~~~-~V~~v~~~------~v~~~~g~~ 105 (283)
+ .....+.+.+.+.+++. |++++.+ +|++++.+ .|++++|++
T Consensus 73 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~ 152 (399)
T 2x3n_A 73 RVRHELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRV 152 (399)
T ss_dssp EEECEEEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCE
T ss_pred CcceeEEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCE
Confidence 0 00124556667777777 9999999 89988643 566778889
Q ss_pred EEeeEEEEcCCCCCc
Q 023375 106 VPYGLLVWSTGVGPS 120 (283)
Q Consensus 106 i~~d~vi~a~G~~~~ 120 (283)
+.+|.||.|+|..+.
T Consensus 153 ~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 153 LRPRVVVGADGIASY 167 (399)
T ss_dssp EEEEEEEECCCTTCH
T ss_pred EECCEEEECCCCChH
Confidence 999999999998775
No 148
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.61 E-value=9.2e-08 Score=88.37 Aligned_cols=94 Identities=18% Similarity=0.241 Sum_probs=61.0
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCC-------CCCC-------CHHH-------HHH
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-------LSSF-------DDRL-------RHY 73 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~-------l~~~-------~~~~-------~~~ 73 (283)
++|+|||||++|+.+|..|++..+ +.+|+|||++.. +|.+ ...+ ..+
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~------------g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~ 71 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDP------------EAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRD 71 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCT------------TSEEEEECCC----------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCc------------CCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccC
Confidence 689999999999999999998721 289999999732 1111 1111 122
Q ss_pred HHHHHHhCCCEEEeC-ceEEEeCC--eEEEcC---Cc--EEEeeEEEEcCCCCCc
Q 023375 74 ATTQLSKSGVRLVRG-IVKDVDSQ--KLILND---GT--EVPYGLLVWSTGVGPS 120 (283)
Q Consensus 74 ~~~~l~~~gV~v~~~-~V~~v~~~--~v~~~~---g~--~i~~d~vi~a~G~~~~ 120 (283)
.....++.|++++.+ +|++++.+ .+.+.+ |+ ++.+|.+|+|||.+|.
T Consensus 72 ~~~~~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~ 126 (472)
T 3iwa_A 72 PEFFRINKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKAN 126 (472)
T ss_dssp ---------CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred HHHHhhhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcC
Confidence 222233579999988 89999765 566554 65 7899999999998776
No 149
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.61 E-value=7.9e-08 Score=88.71 Aligned_cols=92 Identities=20% Similarity=0.285 Sum_probs=69.8
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCC-----------------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS----------------------------- 64 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~----------------------------- 64 (283)
.+|+|||||++|+.+|..|++.+ .+|+|||+. .+..
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~~G--------------~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~ 70 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAKAK--------------YNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANV 70 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred ceEEEECCCHHHHHHHHHHHhCC--------------CeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccC
Confidence 47999999999999999999887 899999965 3311
Q ss_pred --CCCH-H----------HH--HHHHHHHHhCCCEEEeCceEEEeCCe--EEEcCCcE--EEeeEEEEcCCCCCc
Q 023375 65 --SFDD-R----------LR--HYATTQLSKSGVRLVRGIVKDVDSQK--LILNDGTE--VPYGLLVWSTGVGPS 120 (283)
Q Consensus 65 --~~~~-~----------~~--~~~~~~l~~~gV~v~~~~V~~v~~~~--v~~~~g~~--i~~d~vi~a~G~~~~ 120 (283)
.++- . +. ..+.+.+++.||+++.+++..++++. |.+++|++ +.+|.+|+|||.+|.
T Consensus 71 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~ 145 (466)
T 3l8k_A 71 KIPLDFSTVQDRKDYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETA 145 (466)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEEC
T ss_pred CCCcCHHHHHHHHHhheeccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCcc
Confidence 0110 0 11 33445566789999988888888875 45567878 999999999998776
No 150
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.61 E-value=1.4e-07 Score=86.46 Aligned_cols=91 Identities=16% Similarity=0.185 Sum_probs=69.1
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCcc--EEEEEeCC-CCC-----CC--------------------
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI--HVTLIEAN-EIL-----SS-------------------- 65 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~--~V~li~~~-~~l-----~~-------------------- 65 (283)
..+|+|||||++|+.+|..|++.+ . +|++||+. .+. ..
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G--------------~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~ 71 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEK--------------AFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPI 71 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTT--------------CCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCB
T ss_pred CCEEEEECccHHHHHHHHHHHhcC--------------CCCCeEEEecCCCCCCeecCCCCCCccccccccccccccccc
Confidence 468999999999999999999876 6 99999975 221 00
Q ss_pred --------------------C---------------------CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--C--eEE
Q 023375 66 --------------------F---------------------DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q--KLI 99 (283)
Q Consensus 66 --------------------~---------------------~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~--~v~ 99 (283)
. ...+.+++.+..++.++.++.+ +|++++. + .|+
T Consensus 72 ~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~ 151 (447)
T 2gv8_A 72 VGPAALPVYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVT 151 (447)
T ss_dssp CCSSSCCBCCCCCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEE
T ss_pred ccccccCCccCchhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEE
Confidence 0 1245667777777778888888 8988864 3 466
Q ss_pred EcC---Cc---EEEeeEEEEcCCCC
Q 023375 100 LND---GT---EVPYGLLVWSTGVG 118 (283)
Q Consensus 100 ~~~---g~---~i~~d~vi~a~G~~ 118 (283)
+.+ |+ ++.+|.||+|+|..
T Consensus 152 ~~~~~~G~~~~~~~~d~VVvAtG~~ 176 (447)
T 2gv8_A 152 YKGTKAGSPISKDIFDAVSICNGHY 176 (447)
T ss_dssp EEESSTTCCEEEEEESEEEECCCSS
T ss_pred EeecCCCCeeEEEEeCEEEECCCCC
Confidence 655 66 79999999999993
No 151
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.60 E-value=2.3e-07 Score=85.22 Aligned_cols=93 Identities=19% Similarity=0.307 Sum_probs=71.5
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCC-CCC-------------------C----C--
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS-------------------S----F-- 66 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~-~l~-------------------~----~-- 66 (283)
...+|+|||||++|+.+|..|++.+ .+|+|+|+.. +.. . +
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G--------------~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~ 90 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEG--------------ANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPG 90 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTB
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCC--------------CCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhcc
Confidence 3468999999999999999999876 8899998752 210 0 0
Q ss_pred ------------------------------------------CHHHHHHHHHHHHhCCCEEEeC-ceEEEe--CC---eE
Q 023375 67 ------------------------------------------DDRLRHYATTQLSKSGVRLVRG-IVKDVD--SQ---KL 98 (283)
Q Consensus 67 ------------------------------------------~~~~~~~~~~~l~~~gV~v~~~-~V~~v~--~~---~v 98 (283)
...+.+.+.+.+++.||+++++ +|+++. ++ .|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V 170 (447)
T 2i0z_A 91 NGRFLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAV 170 (447)
T ss_dssp TGGGGHHHHHHSCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEE
T ss_pred ChHHHHHHHHhcCHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEE
Confidence 0233455666677889999999 898885 33 36
Q ss_pred EEcCCcEEEeeEEEEcCCCCC
Q 023375 99 ILNDGTEVPYGLLVWSTGVGP 119 (283)
Q Consensus 99 ~~~~g~~i~~d~vi~a~G~~~ 119 (283)
++.+|+++.+|.||+|+|..+
T Consensus 171 ~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 171 ILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp EETTCCEEECSCEEECCCCSS
T ss_pred EECCCCEEECCEEEECCCCCc
Confidence 777888899999999999988
No 152
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.59 E-value=3.9e-08 Score=90.65 Aligned_cols=89 Identities=19% Similarity=0.202 Sum_probs=69.7
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CC-------CCC--CCHHHHHHHHHHHHhC
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EI-------LSS--FDDRLRHYATTQLSKS 81 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~-------l~~--~~~~~~~~~~~~l~~~ 81 (283)
+..++|+|||||++|+.+|..|++.+ .+|+|||+. .+ +|. ++.++..+..+.+++.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G--------------~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~ 185 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKG--------------YEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADA 185 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHT--------------CCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC--------------CeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHC
Confidence 34578999999999999999999887 899999987 43 243 4677888888899999
Q ss_pred CCEEEeC-ceEEEeCCeEEEcCCcEEEeeEEEEcCCCCC
Q 023375 82 GVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119 (283)
Q Consensus 82 gV~v~~~-~V~~v~~~~v~~~~g~~i~~d~vi~a~G~~~ 119 (283)
||+++++ .|. ..+.++++ .+.+|.||+|+|..+
T Consensus 186 gv~~~~~~~v~----~~v~~~~~-~~~~d~vvlAtG~~~ 219 (456)
T 2vdc_G 186 GVIYHPNFEVG----RDASLPEL-RRKHVAVLVATGVYK 219 (456)
T ss_dssp TCEEETTCCBT----TTBCHHHH-HSSCSEEEECCCCCE
T ss_pred CcEEEeCCEec----cEEEhhHh-HhhCCEEEEecCCCC
Confidence 9999998 442 22333333 256999999999863
No 153
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.59 E-value=1.9e-07 Score=85.70 Aligned_cols=94 Identities=23% Similarity=0.259 Sum_probs=69.2
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCC----------------CHHHHHHHHHHH
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSF----------------DDRLRHYATTQL 78 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~----------------~~~~~~~~~~~l 78 (283)
.+|+|||||++|+.+|..|++... +.+|+|||+....+.. .+.+.....+.+
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~------------g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 68 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHP------------DADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEEL 68 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCT------------TCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhCc------------CCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHH
Confidence 379999999999999999998721 1899999987422111 111222234567
Q ss_pred HhCCCEEEeC-ceEEEe--CCeEEEcC-----CcEEEeeEEEEcCCCCCc
Q 023375 79 SKSGVRLVRG-IVKDVD--SQKLILND-----GTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 79 ~~~gV~v~~~-~V~~v~--~~~v~~~~-----g~~i~~d~vi~a~G~~~~ 120 (283)
++.||+++.+ ++..++ ++.+.+.+ ++++.+|.+|+|+|.+|.
T Consensus 69 ~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~ 118 (452)
T 2cdu_A 69 SNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPT 118 (452)
T ss_dssp HHTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred HHcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcC
Confidence 7889999888 798887 34677653 467999999999998876
No 154
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.59 E-value=5.1e-08 Score=90.86 Aligned_cols=92 Identities=22% Similarity=0.366 Sum_probs=59.8
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCC---------C---------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---------S--------------------- 64 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l---------~--------------------- 64 (283)
.+|+|||||++|+.+|..|++.+ .+|+|||++.+. |
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~g--------------~~V~liE~~~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g 68 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARHN--------------AKVALVEKSRLGGTCVNVGCVPKKIMFNAASVHDILENSRHYG 68 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSTTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGT
T ss_pred cCEEEECCCHHHHHHHHHHHHCC--------------CcEEEEeCCCcCccccccCCcchHHHHHHHHHHHHHHhhHhcC
Confidence 47999999999999999999876 899999987531 0
Q ss_pred -----CCC------------HHHHHHHHHHHHhCCCEEEeCceEEEeCCeEEEcC-------------CcEEEeeEEEEc
Q 023375 65 -----SFD------------DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILND-------------GTEVPYGLLVWS 114 (283)
Q Consensus 65 -----~~~------------~~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~~~-------------g~~i~~d~vi~a 114 (283)
.++ ..+.....+.+++.||+++.+.+..+++..+.+.+ ++++.+|.+|+|
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViA 148 (500)
T 1onf_A 69 FDTKFSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIA 148 (500)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC--------------------------CBSSEEEC
T ss_pred CccCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeccccccccccCCCceEEEeCEEEEC
Confidence 011 11122234556788999998865556666666644 668999999999
Q ss_pred CCCCCc
Q 023375 115 TGVGPS 120 (283)
Q Consensus 115 ~G~~~~ 120 (283)
||.+|.
T Consensus 149 tGs~p~ 154 (500)
T 1onf_A 149 VGNKPV 154 (500)
T ss_dssp CCCCBC
T ss_pred CCCCCC
Confidence 999886
No 155
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.59 E-value=7.1e-08 Score=88.51 Aligned_cols=94 Identities=19% Similarity=0.352 Sum_probs=69.1
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCC--------------HHHHHHHHHHHHh
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFD--------------DRLRHYATTQLSK 80 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~--------------~~~~~~~~~~l~~ 80 (283)
++|+|||||++|+.+|..|++..+ +.+|+|||++..++..+ +++.....+.+++
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~------------g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHP------------DAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMES 68 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT------------TSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHhCc------------CCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHH
Confidence 379999999999999999998621 18999999874322111 1122233466778
Q ss_pred CCCEEEeC-ceEEEeC--CeEEEcC---Cc--EEEeeEEEEcCCCCCc
Q 023375 81 SGVRLVRG-IVKDVDS--QKLILND---GT--EVPYGLLVWSTGVGPS 120 (283)
Q Consensus 81 ~gV~v~~~-~V~~v~~--~~v~~~~---g~--~i~~d~vi~a~G~~~~ 120 (283)
.||+++.+ .+..++. +.|.+.+ |+ ++.+|.+|+|||.+|.
T Consensus 69 ~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~ 116 (447)
T 1nhp_A 69 RGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPF 116 (447)
T ss_dssp TTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred CCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcC
Confidence 89999888 8888864 4677653 65 4899999999998876
No 156
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.58 E-value=1.1e-07 Score=87.73 Aligned_cols=92 Identities=23% Similarity=0.298 Sum_probs=72.0
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCC------------------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------ 64 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~------------------------------ 64 (283)
.+|+|||||++|+.+|..|++.+ .+|+|||++.+..
T Consensus 6 ~DVvVIGaG~aGl~aA~~la~~G--------------~~V~liEk~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g 71 (463)
T 4dna_A 6 YDLFVIGGGSGGVRSGRLAAALG--------------KKVAIAEEFRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFG 71 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT--------------CCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGT
T ss_pred CcEEEECcCHHHHHHHHHHHhCC--------------CEEEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcC
Confidence 57999999999999999999887 8999999853211
Q ss_pred ------CCC------------HHHHHHHHHHHHhCCCEEEeCceEEEeCCeEEE-cCCcEEEeeEEEEcCCCCCc
Q 023375 65 ------SFD------------DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLIL-NDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 65 ------~~~------------~~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~-~~g~~i~~d~vi~a~G~~~~ 120 (283)
.++ ..+.....+.+++.||+++.+++..+++..+.+ .+++++.+|.+|+|+|.+|.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~~~~~~~~~d~lviAtG~~p~ 146 (463)
T 4dna_A 72 WTVGESRFDWAKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLLASGKTVTAERIVIAVGGHPS 146 (463)
T ss_dssp EEECCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTTEEEEEEEEEECCCEEEC
T ss_pred cccCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEecCCeEEEeCEEEEecCCCcc
Confidence 011 122333455567789999999888888888888 57889999999999998776
No 157
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.58 E-value=2.8e-07 Score=84.95 Aligned_cols=91 Identities=26% Similarity=0.398 Sum_probs=69.1
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCC------------------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------ 64 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~------------------------------ 64 (283)
.+|+|||||++|+.+|..|++.+ .+|+|||++.+..
T Consensus 7 ~dvvIIG~G~aG~~aA~~l~~~g--------------~~V~lie~~~~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g 72 (464)
T 2eq6_A 7 YDLIVIGTGPGGYHAAIRAAQLG--------------LKVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFG 72 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CeEEEEeCCCCCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcC
Confidence 58999999999999999999876 8999999875210
Q ss_pred -----CCC-HHHH-----------HHHHHHHHhCCCEEEeCceEEEeCCeEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 65 -----SFD-DRLR-----------HYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 65 -----~~~-~~~~-----------~~~~~~l~~~gV~v~~~~V~~v~~~~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
..+ +.+. ....+.+++.||+++.+++..++++.|.+. |+++.+|.+|+|||.+|.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~-g~~~~~d~lViATGs~p~ 144 (464)
T 2eq6_A 73 LKAKPELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVG-GERYGAKSLILATGSEPL 144 (464)
T ss_dssp EECCCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEET-TEEEEEEEEEECCCEEEC
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccCCEEEEc-cEEEEeCEEEEcCCCCCC
Confidence 001 0111 112345677899999996555777888887 778999999999999876
No 158
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.57 E-value=1.9e-07 Score=88.11 Aligned_cols=94 Identities=16% Similarity=0.241 Sum_probs=67.8
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCC--------------H-HHHHHHHHHHH
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFD--------------D-RLRHYATTQLS 79 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~--------------~-~~~~~~~~~l~ 79 (283)
++|+|||||++|+.+|..|++.+. +.+|++|++....+... . .+..+.....+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~------------~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 69 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSE------------TAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKA 69 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCS------------SSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhhCc------------CCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHH
Confidence 589999999999999999998631 28999999974322110 0 01122233344
Q ss_pred hCCCEEEeC-ceEEEeCC--eEEEcC---Cc--EEEeeEEEEcCCCCCc
Q 023375 80 KSGVRLVRG-IVKDVDSQ--KLILND---GT--EVPYGLLVWSTGVGPS 120 (283)
Q Consensus 80 ~~gV~v~~~-~V~~v~~~--~v~~~~---g~--~i~~d~vi~a~G~~~~ 120 (283)
+.|++++.+ +|++++.+ .+.+.+ |+ ++.+|.+|+|||.+|.
T Consensus 70 ~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~ 118 (565)
T 3ntd_A 70 RFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPI 118 (565)
T ss_dssp HHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred hcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCC
Confidence 579999998 89999865 465543 54 7899999999999776
No 159
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.57 E-value=3.4e-07 Score=81.67 Aligned_cols=58 Identities=17% Similarity=0.137 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEeCC----eEEEcCCcEEEeeEEEEcCCCCCchhhhccC
Q 023375 69 RLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127 (283)
Q Consensus 69 ~~~~~~~~~l~~~gV~v~~~-~V~~v~~~----~v~~~~g~~i~~d~vi~a~G~~~~~~~~~~~ 127 (283)
.+...+.+.+++.|++++.+ +|+++..+ .|.+.+| ++.+|.||+|+|.....+...++
T Consensus 165 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~ 227 (382)
T 1ryi_A 165 FVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQLG 227 (382)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhcC
Confidence 45566777788899999998 89988653 2556566 89999999999987665655544
No 160
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.56 E-value=3e-07 Score=84.80 Aligned_cols=93 Identities=26% Similarity=0.323 Sum_probs=68.7
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCC---------------------------CCC-
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI---------------------------LSS- 65 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~---------------------------l~~- 65 (283)
..+|+|||||++|+.+|..|++.+ .+|+|||++.+ .|.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g--------------~~V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~ 69 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQG--------------AQVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFD 69 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCC--------------CEEEEEeCCCCCccccCCCccchHHHHHHHHHHHHHhhhhhc
Confidence 368999999999999999999876 89999998632 111
Q ss_pred ---------CC-HHHHH-------H-----HHHHHHhC-CCEEEeCceEEEeCCeE--EEcCC--cEEEeeEEEEcCCCC
Q 023375 66 ---------FD-DRLRH-------Y-----ATTQLSKS-GVRLVRGIVKDVDSQKL--ILNDG--TEVPYGLLVWSTGVG 118 (283)
Q Consensus 66 ---------~~-~~~~~-------~-----~~~~l~~~-gV~v~~~~V~~v~~~~v--~~~~g--~~i~~d~vi~a~G~~ 118 (283)
.+ ..+.. . ..+.+++. ||+++.+++..++.+.+ .+.+| +++.+|.+|+|||.+
T Consensus 70 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~ 149 (467)
T 1zk7_A 70 GGIAATVPTIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGAS 149 (467)
T ss_dssp TTSCCCCCCCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCEE
T ss_pred CCccCCCCccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCC
Confidence 11 11111 1 12445666 99999888778887754 44577 679999999999987
Q ss_pred Cc
Q 023375 119 PS 120 (283)
Q Consensus 119 ~~ 120 (283)
|.
T Consensus 150 p~ 151 (467)
T 1zk7_A 150 PA 151 (467)
T ss_dssp EC
T ss_pred CC
Confidence 76
No 161
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.56 E-value=1.6e-07 Score=86.25 Aligned_cols=98 Identities=17% Similarity=0.186 Sum_probs=70.7
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCC-CC-------CC--------------------
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-IL-------SS-------------------- 65 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~-~l-------~~-------------------- 65 (283)
..+|+|||||++|+.+|..|++.+... .. .+|++||+.. +. +.
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~--------~~-~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~ 100 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQ--------GA-LEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSP 100 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHH--------CC-CCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCT
T ss_pred cCCEEEECCCHHHHHHHHHHHhccccc--------Cc-ccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCC
Confidence 347999999999999999999876210 00 5899998763 11 00
Q ss_pred ------------------------CCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC---------eEEEcCCc----EEE
Q 023375 66 ------------------------FDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ---------KLILNDGT----EVP 107 (283)
Q Consensus 66 ------------------------~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~---------~v~~~~g~----~i~ 107 (283)
...++.+++....++.+++++.+ +|++++.+ .|.+.+|+ ++.
T Consensus 101 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~ 180 (463)
T 3s5w_A 101 YSFVNYLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRT 180 (463)
T ss_dssp TSHHHHHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEE
T ss_pred CChhHhhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEE
Confidence 01344556666667779999999 79888643 45566665 899
Q ss_pred eeEEEEcCCCCCc
Q 023375 108 YGLLVWSTGVGPS 120 (283)
Q Consensus 108 ~d~vi~a~G~~~~ 120 (283)
+|.||+|+|..|.
T Consensus 181 ~d~lVlAtG~~p~ 193 (463)
T 3s5w_A 181 TRALVVSPGGTPR 193 (463)
T ss_dssp ESEEEECCCCEEC
T ss_pred eCEEEECCCCCCC
Confidence 9999999998765
No 162
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.56 E-value=3.3e-07 Score=87.00 Aligned_cols=97 Identities=18% Similarity=0.231 Sum_probs=71.8
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCC-------------C--HHHHHHHHH
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSF-------------D--DRLRHYATT 76 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~-------------~--~~~~~~~~~ 76 (283)
...++|+|||||++|+.+|..|++... +.+|++||+....+.. + ..+..+...
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~------------g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~ 101 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSE------------EDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVER 101 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCS------------SSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHH
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCc------------CCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHH
Confidence 345799999999999999999998731 2899999997332110 0 112334556
Q ss_pred HHHhCCCEEEeC-ceEEEeCC--eEEEc---CCc--EEEeeEEEEcCCCCCc
Q 023375 77 QLSKSGVRLVRG-IVKDVDSQ--KLILN---DGT--EVPYGLLVWSTGVGPS 120 (283)
Q Consensus 77 ~l~~~gV~v~~~-~V~~v~~~--~v~~~---~g~--~i~~d~vi~a~G~~~~ 120 (283)
..++.|++++.+ +|++++.+ .+.+. +|+ ++.+|.+|+|||.+|.
T Consensus 102 ~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~ 153 (588)
T 3ics_A 102 MSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPI 153 (588)
T ss_dssp HHHHTTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred HHHhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCC
Confidence 667889999988 89998764 55553 465 7899999999998776
No 163
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.56 E-value=2.2e-07 Score=86.31 Aligned_cols=92 Identities=15% Similarity=0.270 Sum_probs=69.6
Q ss_pred CeEEEEccCcHHHHHHHHHHH-hhhhHHHhhcCCCCCccEEEEEe---------CCCCCC--------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSD-FIMRDVRQRYSHVKDYIHVTLIE---------ANEILS-------------------- 64 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~-~~~~~~~~~~~~~~~~~~V~li~---------~~~~l~-------------------- 64 (283)
.+|+|||||+.|+.+|..|++ .+ .+|+||| .+.+..
T Consensus 4 ~dvvVIGgG~aGl~aA~~la~~~G--------------~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~ 69 (490)
T 1fec_A 4 YDLVVIGAGSGGLEAGWNAASLHK--------------KRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYM 69 (490)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHC--------------CCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHH
T ss_pred ccEEEECCCHHHHHHHHHHHHHcC--------------CEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHH
Confidence 589999999999999999998 76 8999999 333211
Q ss_pred ------------------CCC-HH-----------HHHHHHHHHHhC-CCEEEeCceEEEeCCeEEEc-----CC---cE
Q 023375 65 ------------------SFD-DR-----------LRHYATTQLSKS-GVRLVRGIVKDVDSQKLILN-----DG---TE 105 (283)
Q Consensus 65 ------------------~~~-~~-----------~~~~~~~~l~~~-gV~v~~~~V~~v~~~~v~~~-----~g---~~ 105 (283)
.++ +. +.....+.+++. ||+++.+.++.++++.+.+. +| ++
T Consensus 70 ~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~g~~~~~ 149 (490)
T 1fec_A 70 DTIRESAGFGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLET 149 (490)
T ss_dssp HHHHHGGGGTEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETTEEEEESSSSTTSCEEEE
T ss_pred HHHHHHHhcCcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCCEEEEEeeccCCCCceEE
Confidence 001 01 112234456678 99999998778888888874 67 68
Q ss_pred EEeeEEEEcCCCCCc
Q 023375 106 VPYGLLVWSTGVGPS 120 (283)
Q Consensus 106 i~~d~vi~a~G~~~~ 120 (283)
+.+|.+|+|||.+|.
T Consensus 150 ~~~d~lviAtGs~p~ 164 (490)
T 1fec_A 150 LDTEYILLATGSWPQ 164 (490)
T ss_dssp EEEEEEEECCCEEEC
T ss_pred EEcCEEEEeCCCCCC
Confidence 999999999998876
No 164
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.54 E-value=3.7e-07 Score=84.54 Aligned_cols=95 Identities=23% Similarity=0.320 Sum_probs=67.8
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCC--------------CHHHHHHHHHHH-
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSF--------------DDRLRHYATTQL- 78 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~--------------~~~~~~~~~~~l- 78 (283)
..+|+|||||++|+.+|..|++... +.+|+|||+....+.. ..++.....+.+
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~------------g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 103 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDE------------NANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFR 103 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCT------------TCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhhCc------------CCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHH
Confidence 4689999999999999999988621 2899999987432111 111111223445
Q ss_pred HhCCCEEEeC-ceEEEeC--CeEEEc---CCc--EEEeeEEEEcCCCCCc
Q 023375 79 SKSGVRLVRG-IVKDVDS--QKLILN---DGT--EVPYGLLVWSTGVGPS 120 (283)
Q Consensus 79 ~~~gV~v~~~-~V~~v~~--~~v~~~---~g~--~i~~d~vi~a~G~~~~ 120 (283)
++.||+++.+ +|+.++. +.+.+. +|+ ++.+|.+|+|+|.+|.
T Consensus 104 ~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~ 153 (480)
T 3cgb_A 104 DKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPV 153 (480)
T ss_dssp HTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred hhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCccc
Confidence 3459999998 8998874 356664 366 7999999999998876
No 165
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.54 E-value=4.6e-08 Score=91.22 Aligned_cols=94 Identities=15% Similarity=0.292 Sum_probs=65.8
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCC-C--CCC--------CCH-HHHHHHHHHH--H
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-I--LSS--------FDD-RLRHYATTQL--S 79 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~-~--l~~--------~~~-~~~~~~~~~l--~ 79 (283)
.++|||||||+.|+.+|..|.... .+||||++.. + .|. +++ .+...+.+.+ .
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~--------------~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~ 107 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKK--------------YNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKK 107 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTT--------------CEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTC
T ss_pred CCCEEEECCcHHHHHHHHHhhhCC--------------CcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhh
Confidence 458999999999999999886543 8999999863 1 121 111 1111122332 2
Q ss_pred hCCCEEEeCceEEEeCC--eEEE--------------------cCCcEEEeeEEEEcCCCCCch
Q 023375 80 KSGVRLVRGIVKDVDSQ--KLIL--------------------NDGTEVPYGLLVWSTGVGPST 121 (283)
Q Consensus 80 ~~gV~v~~~~V~~v~~~--~v~~--------------------~~g~~i~~d~vi~a~G~~~~~ 121 (283)
+.+++++.++|++|+.+ .|++ .++.+++||.+|+|+|.+|+.
T Consensus 108 ~~~v~~~~~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~ 171 (502)
T 4g6h_A 108 KGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNT 171 (502)
T ss_dssp SSCEEEEEEEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECC
T ss_pred cCCeEEEEEEEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCccccc
Confidence 45799998889998764 4554 246789999999999998873
No 166
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.52 E-value=4e-07 Score=84.49 Aligned_cols=93 Identities=16% Similarity=0.214 Sum_probs=67.8
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCC----------------------------
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS---------------------------- 64 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~---------------------------- 64 (283)
..+|+|||||++|+.+|..|++.+ .+|+|||+. .+..
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G--------------~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~ 90 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLG--------------MKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLE 90 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSG
T ss_pred cCCEEEECCCHHHHHHHHHHHHCC--------------CeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHh
Confidence 368999999999999999999887 899999975 3310
Q ss_pred CC---------C------------HHHHHHHHHHHHhCCCEEEeCceEEEeCCeEEE--cCC--cEEEeeEEEEcCCCCC
Q 023375 65 SF---------D------------DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLIL--NDG--TEVPYGLLVWSTGVGP 119 (283)
Q Consensus 65 ~~---------~------------~~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~--~~g--~~i~~d~vi~a~G~~~ 119 (283)
.+ + ..+.......+++.+|+++.+....++++.+.+ .+| +++.+|.+|+|||.+|
T Consensus 91 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p 170 (491)
T 3urh_A 91 ALGVEVANPKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDV 170 (491)
T ss_dssp GGTEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEEEEECTTSCEEEEECSEEEECCCEEC
T ss_pred hcCcccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCC
Confidence 00 0 011223445567889999998666666665544 455 5799999999999887
Q ss_pred c
Q 023375 120 S 120 (283)
Q Consensus 120 ~ 120 (283)
.
T Consensus 171 ~ 171 (491)
T 3urh_A 171 A 171 (491)
T ss_dssp C
T ss_pred C
Confidence 5
No 167
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.51 E-value=2.8e-07 Score=84.73 Aligned_cols=92 Identities=18% Similarity=0.330 Sum_probs=68.3
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCC---------C--------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL---------S-------------------- 64 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l---------~-------------------- 64 (283)
.+|+|||||++|+.+|..|++.+ .+|+|||++ .+. |
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g--------------~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g 67 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLG--------------MKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLG 67 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTT
T ss_pred CCEEEECCChhHHHHHHHHHHCC--------------CeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCC
Confidence 37999999999999999999876 899999987 431 0
Q ss_pred ------CCC-HH-----------HHHHHHHHHHhCCCEEEeCceEEEeCCeEEEc-CCcEEEeeEEEEcCCCCCc
Q 023375 65 ------SFD-DR-----------LRHYATTQLSKSGVRLVRGIVKDVDSQKLILN-DGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 65 ------~~~-~~-----------~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~~-~g~~i~~d~vi~a~G~~~~ 120 (283)
..+ +. +...+.+.+++.||+++.+.+..++++.+.+. +|+++.+|.+|+|||.+|.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~g~~~~~d~lviAtG~~p~ 142 (455)
T 2yqu_A 68 AKVKGVELDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVEETGEELEARYILIATGSAPL 142 (455)
T ss_dssp EEECCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTCCEEEEEEEEECCCEEEC
T ss_pred cccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEeeCCEEEEecEEEECCCCCCC
Confidence 001 01 11123455677899999986555666766665 5788999999999999876
No 168
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.51 E-value=5.1e-07 Score=83.84 Aligned_cols=94 Identities=20% Similarity=0.271 Sum_probs=70.4
Q ss_pred CeEEEEccCcHHHHHHHHHHHhh-hhHHHhhcCCCCCccEEEEEeCCCCCCCC--------------CHHHHHHHHHHHH
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFI-MRDVRQRYSHVKDYIHVTLIEANEILSSF--------------DDRLRHYATTQLS 79 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~-~~~~~~~~~~~~~~~~V~li~~~~~l~~~--------------~~~~~~~~~~~l~ 79 (283)
.+|+|||||++|+.+|..|++.+ .. .+|+|||+...++.. .+++.....+.++
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~~~------------~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYGDA------------NEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELE 103 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHGGG------------SEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCC------------CeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHH
Confidence 68999999999999999999875 22 899999987422111 1122222345677
Q ss_pred hCCCEEEeC-ceEEEeC--CeEEEc-CC--cEEEeeEEEEcCCCCCc
Q 023375 80 KSGVRLVRG-IVKDVDS--QKLILN-DG--TEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 80 ~~gV~v~~~-~V~~v~~--~~v~~~-~g--~~i~~d~vi~a~G~~~~ 120 (283)
+.||+++.+ +|..++. +.+.+. ++ +++.+|.+|+|||.+|.
T Consensus 104 ~~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~ 150 (490)
T 2bc0_A 104 SLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPI 150 (490)
T ss_dssp HTTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEEC
T ss_pred hCCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcC
Confidence 889999988 7999874 467776 54 57999999999998876
No 169
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.51 E-value=2.2e-07 Score=86.40 Aligned_cols=92 Identities=15% Similarity=0.257 Sum_probs=69.0
Q ss_pred CeEEEEccCcHHHHHHHHHHH-hhhhHHHhhcCCCCCccEEEEEe---------CCCCCC--------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSD-FIMRDVRQRYSHVKDYIHVTLIE---------ANEILS-------------------- 64 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~-~~~~~~~~~~~~~~~~~~V~li~---------~~~~l~-------------------- 64 (283)
.+|+|||||+.|+.+|..|++ .+ .+|+||| ...+..
T Consensus 8 ~dvvVIGgG~aGl~aA~~la~~~G--------------~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~ 73 (495)
T 2wpf_A 8 FDLVVIGAGSGGLEAGWNAATLYG--------------KRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYM 73 (495)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHC--------------CCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHH
T ss_pred cCEEEECCChhHHHHHHHHHHhcC--------------CeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHH
Confidence 589999999999999999998 76 8999999 323210
Q ss_pred ------------------CCC-HHHH-----------HHHHHHHHhC-CCEEEeCceEEEeCCeEEEc---C-----CcE
Q 023375 65 ------------------SFD-DRLR-----------HYATTQLSKS-GVRLVRGIVKDVDSQKLILN---D-----GTE 105 (283)
Q Consensus 65 ------------------~~~-~~~~-----------~~~~~~l~~~-gV~v~~~~V~~v~~~~v~~~---~-----g~~ 105 (283)
.++ ..+. ......+++. ||+++.++++.+++..|.++ + +++
T Consensus 74 ~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~~~~~~~ 153 (495)
T 2wpf_A 74 DHLRESAGFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKER 153 (495)
T ss_dssp HHHHHHHTTTEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEETTEEEEESSSSTTSCEEEE
T ss_pred HHHhHHHhcCcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeCCEEEEeecCCccCCCCeE
Confidence 000 0111 1223345677 99999998777888888886 4 678
Q ss_pred EEeeEEEEcCCCCCc
Q 023375 106 VPYGLLVWSTGVGPS 120 (283)
Q Consensus 106 i~~d~vi~a~G~~~~ 120 (283)
+.+|.+|+|||.+|.
T Consensus 154 ~~~d~lViATGs~p~ 168 (495)
T 2wpf_A 154 LQADHILLATGSWPQ 168 (495)
T ss_dssp EEEEEEEECCCEEEC
T ss_pred EEcCEEEEeCCCCcC
Confidence 999999999999876
No 170
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.51 E-value=5.9e-07 Score=82.83 Aligned_cols=93 Identities=24% Similarity=0.284 Sum_probs=68.6
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCC---------------------------
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS--------------------------- 65 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~--------------------------- 65 (283)
..+|+|||||++|+.+|..|++.+ .+|++||+. .+...
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~g--------------~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~ 71 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQLG--------------FKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFA 71 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHT--------------CCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCC--------------CeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999876 899999987 43110
Q ss_pred ----------CC-HH-----------HHHHHHHHHHhCCCEEEeCceEEEeCCeEEE--cCC--cEEEeeEEEEcCCCCC
Q 023375 66 ----------FD-DR-----------LRHYATTQLSKSGVRLVRGIVKDVDSQKLIL--NDG--TEVPYGLLVWSTGVGP 119 (283)
Q Consensus 66 ----------~~-~~-----------~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~--~~g--~~i~~d~vi~a~G~~~ 119 (283)
.+ +. +...+.+.+++.||+++.+....++++.+.+ .+| +++.+|.+|+|+|.+|
T Consensus 72 ~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p 151 (470)
T 1dxl_A 72 NHGVKVSNVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDV 151 (470)
T ss_dssp HHTEEESCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEEE
T ss_pred hcCcccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCCC
Confidence 00 00 1112345566789999999544577776555 356 6899999999999987
Q ss_pred c
Q 023375 120 S 120 (283)
Q Consensus 120 ~ 120 (283)
.
T Consensus 152 ~ 152 (470)
T 1dxl_A 152 K 152 (470)
T ss_dssp C
T ss_pred C
Confidence 6
No 171
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.50 E-value=4e-07 Score=85.25 Aligned_cols=92 Identities=14% Similarity=0.185 Sum_probs=70.8
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCC-CCC----------------------------
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS---------------------------- 64 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~-~l~---------------------------- 64 (283)
..+|+|||||++|+.+|..|++.+ .+|+|||++. +..
T Consensus 43 ~~dVvIIGgG~aGl~aA~~l~~~G--------------~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~ 108 (523)
T 1mo9_A 43 EYDAIFIGGGAAGRFGSAYLRAMG--------------GRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSG 108 (523)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhh
Confidence 468999999999999999999886 8999999875 311
Q ss_pred -----CC------CHHHHHHH----H---HHH-----HhCCCEEE-eCceEEEeCCeEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 65 -----SF------DDRLRHYA----T---TQL-----SKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 65 -----~~------~~~~~~~~----~---~~l-----~~~gV~v~-~~~V~~v~~~~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
.+ ..++...+ . +.+ ++.||+++ .++++.++...|.+. ++++.+|.+|+|||.+|.
T Consensus 109 ~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~v~~~-g~~~~~d~lViATGs~p~ 187 (523)
T 1mo9_A 109 QYWFPDMTEKVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAA-GKVFKAKNLILAVGAGPG 187 (523)
T ss_dssp STTCCCCTTCCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEETTEEEET-TEEEEBSCEEECCCEECC
T ss_pred cCcHHHHHhhhhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeCCEEEEC-CEEEEeCEEEECCCCCCC
Confidence 11 11222222 2 455 77899999 458888888888876 778999999999999876
No 172
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.50 E-value=5.5e-07 Score=81.15 Aligned_cols=93 Identities=22% Similarity=0.263 Sum_probs=67.4
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCC------CCHHHHHH-------------
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS------FDDRLRHY------------- 73 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~------~~~~~~~~------------- 73 (283)
..+|+|||||++|+.+|..|++.+ .+|+|+|+. ...+. +.+...+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G--------------~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~ 70 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAG--------------VDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISV 70 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCB
T ss_pred CCcEEEECCCHHHHHHHHHHHhCC--------------CCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccc
Confidence 468999999999999999999887 899999986 32111 22222211
Q ss_pred ------------------------------HHHHHHh--CCCEEEeC-ceEEEeCC----eEEEcCCcEEEeeEEEEcCC
Q 023375 74 ------------------------------ATTQLSK--SGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTG 116 (283)
Q Consensus 74 ------------------------------~~~~l~~--~gV~v~~~-~V~~v~~~----~v~~~~g~~i~~d~vi~a~G 116 (283)
+.+.|.+ .|++++.+ +|++++.+ .|++.+|+++.+|.||.|.|
T Consensus 71 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG 150 (397)
T 2vou_A 71 PSSSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADG 150 (397)
T ss_dssp CCCEEEEEETTTCCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCC
T ss_pred cccceEEEecCCCCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCC
Confidence 1222222 37888888 78888543 36678898999999999999
Q ss_pred CCCc
Q 023375 117 VGPS 120 (283)
Q Consensus 117 ~~~~ 120 (283)
..+.
T Consensus 151 ~~S~ 154 (397)
T 2vou_A 151 GASV 154 (397)
T ss_dssp TTCH
T ss_pred cchh
Confidence 8765
No 173
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.50 E-value=4.1e-07 Score=83.61 Aligned_cols=92 Identities=23% Similarity=0.283 Sum_probs=68.1
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCC------------------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------ 64 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~------------------------------ 64 (283)
.+|+|||||++|+.+|..|++.+ .+|+|||+..+..
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~~g--------------~~V~lie~~~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g 69 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQLG--------------QKVTIVEKGNLGGVCLNVGCIPSKALISASHRYEQAKHSEEMG 69 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGT
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEECCCCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcC
Confidence 57999999999999999999876 8999999863210
Q ss_pred ------CCCH-H-----------HHHHHHHHHHhCCCEEEeCceEEEeCCeEE--EcCC-cEEEeeEEEEcCCCCCc
Q 023375 65 ------SFDD-R-----------LRHYATTQLSKSGVRLVRGIVKDVDSQKLI--LNDG-TEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 65 ------~~~~-~-----------~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~--~~~g-~~i~~d~vi~a~G~~~~ 120 (283)
..+. . +...+.+.+++.||+++.+....++++.+. +.+| +++.+|.+|+|||.+|.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~i~~d~lViATGs~p~ 146 (455)
T 1ebd_A 70 IKAENVTIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTFKNAIIATGSRPI 146 (455)
T ss_dssp EECCSCEECHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEEEEEETTEEEEEECSEEEECCCEEEC
T ss_pred cccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCcEEEEeCEEEEecCCCCC
Confidence 0000 0 222335567788999999954457777544 4566 68999999999999876
No 174
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.49 E-value=4.8e-07 Score=83.59 Aligned_cols=92 Identities=20% Similarity=0.255 Sum_probs=67.8
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCC----------------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS---------------------------- 65 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~---------------------------- 65 (283)
.+|+|||||++|+.+|..|++.+ .+|+|||+. .+...
T Consensus 7 ~dvvIIGgG~aGl~aA~~l~~~g--------------~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~ 72 (474)
T 1zmd_A 7 ADVTVIGSGPGGYVAAIKAAQLG--------------FKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFA 72 (474)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHh
Confidence 57999999999999999999876 899999987 33100
Q ss_pred ----------CC-HH-----------HHHHHHHHHHhCCCEEEeCceEEEeCCeEEE--cC-C-cEEEeeEEEEcCCCCC
Q 023375 66 ----------FD-DR-----------LRHYATTQLSKSGVRLVRGIVKDVDSQKLIL--ND-G-TEVPYGLLVWSTGVGP 119 (283)
Q Consensus 66 ----------~~-~~-----------~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~--~~-g-~~i~~d~vi~a~G~~~ 119 (283)
.+ +. +...+.+.+++.||+++.+.+..++++.+.+ .+ + +++.+|.+|+|||.+|
T Consensus 73 ~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p 152 (474)
T 1zmd_A 73 SRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEV 152 (474)
T ss_dssp HTTEEESCEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEE
T ss_pred hCccccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCC
Confidence 00 01 1112345677889999999655677775544 45 4 5799999999999987
Q ss_pred c
Q 023375 120 S 120 (283)
Q Consensus 120 ~ 120 (283)
.
T Consensus 153 ~ 153 (474)
T 1zmd_A 153 T 153 (474)
T ss_dssp C
T ss_pred C
Confidence 6
No 175
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.47 E-value=6.7e-07 Score=80.89 Aligned_cols=91 Identities=16% Similarity=0.306 Sum_probs=68.8
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCC---------CC--------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---------SS-------------------- 65 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l---------~~-------------------- 65 (283)
.+|+|||||++|+.+|..|++.+ .+|+|+|+.... |.
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G--------------~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~ 71 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSG--------------FKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQ 71 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT--------------CCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCE
T ss_pred CcEEEECCCHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCc
Confidence 58999999999999999999876 788888875210 00
Q ss_pred -------------------------------C-CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--Ce----EEEcCCc--
Q 023375 66 -------------------------------F-DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK----LILNDGT-- 104 (283)
Q Consensus 66 -------------------------------~-~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~~----v~~~~g~-- 104 (283)
+ ...+...+.+.+++.|++++.+ +|++++. +. +.+.+|+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~ 151 (421)
T 3nix_A 72 QKFGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKR 151 (421)
T ss_dssp EECEEEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEE
T ss_pred ccCCcEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEE
Confidence 0 1244555666677789999999 8988863 32 4446787
Q ss_pred EEEeeEEEEcCCCCC
Q 023375 105 EVPYGLLVWSTGVGP 119 (283)
Q Consensus 105 ~i~~d~vi~a~G~~~ 119 (283)
++.+|.||.|+|..+
T Consensus 152 ~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 152 EIEARFIIDASGYGR 166 (421)
T ss_dssp EEEEEEEEECCGGGC
T ss_pred EEEcCEEEECCCCch
Confidence 799999999999776
No 176
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.47 E-value=3e-07 Score=85.14 Aligned_cols=93 Identities=23% Similarity=0.289 Sum_probs=68.8
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCC-----------------------------
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS----------------------------- 64 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~----------------------------- 64 (283)
..+|+|||||++|+.+|..|++.+ .+|+|||++.+..
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~g--------------~~V~liE~~~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~ 76 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASYG--------------AKTLLVEAKALGGTCVNVGCVPKKVMWYASDLATRVSHANEY 76 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTS--------------CCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTT
T ss_pred cCCEEEEcCCHHHHHHHHHHHHCC--------------CcEEEEeCCCcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhc
Confidence 368999999999999999999876 8999999864210
Q ss_pred -------------CCC------------HHHHHHHHHHHHhCCCEEEeCceEEEeCCeEE--EcCCc--EEEeeEEEEcC
Q 023375 65 -------------SFD------------DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLI--LNDGT--EVPYGLLVWST 115 (283)
Q Consensus 65 -------------~~~------------~~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~--~~~g~--~i~~d~vi~a~ 115 (283)
.++ ..+...+.+.+++.||+++.+++..++++.+. +.+|+ ++.+|.+|+||
T Consensus 77 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~~d~lviAt 156 (479)
T 2hqm_A 77 GLYQNLPLDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVAT 156 (479)
T ss_dssp TBSTTSCCSGGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEEEEEEEEEECC
T ss_pred CcccccccccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEEEEeCEEEEcC
Confidence 000 01112234556778999998877777766544 45676 89999999999
Q ss_pred CCCCc
Q 023375 116 GVGPS 120 (283)
Q Consensus 116 G~~~~ 120 (283)
|.+|.
T Consensus 157 Gs~p~ 161 (479)
T 2hqm_A 157 GGKAI 161 (479)
T ss_dssp CEEEC
T ss_pred CCCCC
Confidence 98876
No 177
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.47 E-value=6.2e-07 Score=82.67 Aligned_cols=92 Identities=21% Similarity=0.256 Sum_probs=67.9
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCC----------------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS---------------------------- 65 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~---------------------------- 65 (283)
.+|+|||||++|+.+|..|++.+ .+|+|||+. .+...
T Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~g--------------~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~ 68 (468)
T 2qae_A 3 YDVVVIGGGPGGYVASIKAAQLG--------------MKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFAR 68 (468)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHh
Confidence 47999999999999999999887 899999997 43100
Q ss_pred ----------CC-HH-----------HHHHHHHHHHhCCCEEEeCceEEEeCCeEE--EcCC--cEEEeeEEEEcCCCCC
Q 023375 66 ----------FD-DR-----------LRHYATTQLSKSGVRLVRGIVKDVDSQKLI--LNDG--TEVPYGLLVWSTGVGP 119 (283)
Q Consensus 66 ----------~~-~~-----------~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~--~~~g--~~i~~d~vi~a~G~~~ 119 (283)
.+ +. +.....+.+++.||+++.+....++++.+. +.+| +++.+|.+|+|||.+|
T Consensus 69 ~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p 148 (468)
T 2qae_A 69 YGLMGGEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSEP 148 (468)
T ss_dssp HTEECGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEE
T ss_pred cCcccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCCCc
Confidence 00 01 111234556778999999855557777544 4567 6899999999999987
Q ss_pred c
Q 023375 120 S 120 (283)
Q Consensus 120 ~ 120 (283)
.
T Consensus 149 ~ 149 (468)
T 2qae_A 149 T 149 (468)
T ss_dssp C
T ss_pred C
Confidence 6
No 178
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.45 E-value=6.6e-07 Score=83.21 Aligned_cols=92 Identities=28% Similarity=0.420 Sum_probs=68.8
Q ss_pred CeEEEEccCcHHHHHHHHHHHh---hhhHHHhhcCCCCCccEEEEEeCCCCC---------------------------C
Q 023375 15 LHCVVVGGGPTGVEFSGELSDF---IMRDVRQRYSHVKDYIHVTLIEANEIL---------------------------S 64 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~---~~~~~~~~~~~~~~~~~V~li~~~~~l---------------------------~ 64 (283)
.+|+|||||++|+.+|..|++. + .+|+|||++.+. +
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G--------------~~V~liE~~~~GG~~~~~g~~psk~l~~~a~~~~~~~~~~ 68 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPET--------------TQVTVIDCDGIGGAAVLDDCVPSKTFIASTGLRTELRRAP 68 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTT--------------EEEEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHTTTT
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCc--------------CEEEEEeCCCcCCcccCcCccchHHHHHHHHHHHHHHHHH
Confidence 4799999999999999999987 5 899999987420 0
Q ss_pred --CC---------C-HH-----------HHHHHHHHHHhCCCEEEeCceEEEeC------Ce--EEEcCCc--EEEeeEE
Q 023375 65 --SF---------D-DR-----------LRHYATTQLSKSGVRLVRGIVKDVDS------QK--LILNDGT--EVPYGLL 111 (283)
Q Consensus 65 --~~---------~-~~-----------~~~~~~~~l~~~gV~v~~~~V~~v~~------~~--v~~~~g~--~i~~d~v 111 (283)
.+ + .. +.....+.+++.||+++.+.+..++. +. |.+.+|+ ++.+|.+
T Consensus 69 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~l 148 (499)
T 1xdi_A 69 HLGFHIDFDDAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVV 148 (499)
T ss_dssp TTTBC------CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEE
T ss_pred hCCCccccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEE
Confidence 00 1 11 22234566788999999997777776 44 3445676 7999999
Q ss_pred EEcCCCCCc
Q 023375 112 VWSTGVGPS 120 (283)
Q Consensus 112 i~a~G~~~~ 120 (283)
|+|+|.+|.
T Consensus 149 viATGs~p~ 157 (499)
T 1xdi_A 149 LVATGASPR 157 (499)
T ss_dssp EECCCEEEC
T ss_pred EEcCCCCCC
Confidence 999999876
No 179
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.45 E-value=9.7e-07 Score=77.97 Aligned_cols=59 Identities=14% Similarity=0.174 Sum_probs=44.3
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceEEEeCC-----eEEEcCC--cEEEeeEEEEcCCCCCchhhhcc-CC
Q 023375 70 LRHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLILNDG--TEVPYGLLVWSTGVGPSTLVKSL-DL 128 (283)
Q Consensus 70 ~~~~~~~~l~~~gV~v~~~-~V~~v~~~-----~v~~~~g--~~i~~d~vi~a~G~~~~~~~~~~-~l 128 (283)
+...+.+.+++.|++++++ +|+++..+ .|.+.+| .++.+|.||+|+|.....+...+ ++
T Consensus 152 ~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~ 219 (369)
T 3dme_A 152 LMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGI 219 (369)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETS
T ss_pred HHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCC
Confidence 3344556677889999998 89988642 3566677 48999999999998876776666 54
No 180
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.45 E-value=1.5e-06 Score=75.99 Aligned_cols=90 Identities=13% Similarity=0.206 Sum_probs=63.9
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CC--------------------CCCCCHHHHHH
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EI--------------------LSSFDDRLRHY 73 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~--------------------l~~~~~~~~~~ 73 (283)
.+|+|||||++|+.+|..|++.+ .+|+|+|+. .. +....+.+.+.
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G--------------~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAG--------------HQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATA 68 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHH
T ss_pred ceEEEECCcHHHHHHHHHHHHCC--------------CcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHH
Confidence 47999999999999999999887 899999986 32 11112333333
Q ss_pred HHHHHH------------------------------------------hCCCEEEeC-ceEEEeCC----eEEEcCCcEE
Q 023375 74 ATTQLS------------------------------------------KSGVRLVRG-IVKDVDSQ----KLILNDGTEV 106 (283)
Q Consensus 74 ~~~~l~------------------------------------------~~gV~v~~~-~V~~v~~~----~v~~~~g~~i 106 (283)
+..... ..|++++.+ +|++++.+ .|++.+|+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~ 148 (336)
T 1yvv_A 69 VKQWQAQGHVAEWTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRGDMPVSFSCRITEVFRGEEHWNLLDAEGQNH 148 (336)
T ss_dssp HHHHHHHTSEEEECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHTTCCEECSCCEEEEEECSSCEEEEETTSCEE
T ss_pred HHHHHhCCCeeeccccceeccCcccccCCCCCccEEcCccHHHHHHHHHccCcEEecCEEEEEEEeCCEEEEEeCCCcCc
Confidence 222111 127899999 89988643 3666788776
Q ss_pred E-eeEEEEcCCCC
Q 023375 107 P-YGLLVWSTGVG 118 (283)
Q Consensus 107 ~-~d~vi~a~G~~ 118 (283)
. +|.||.|+|..
T Consensus 149 ~~a~~vV~a~g~~ 161 (336)
T 1yvv_A 149 GPFSHVIIATPAP 161 (336)
T ss_dssp EEESEEEECSCHH
T ss_pred cccCEEEEcCCHH
Confidence 4 99999999864
No 181
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.44 E-value=1e-06 Score=78.68 Aligned_cols=56 Identities=16% Similarity=0.145 Sum_probs=40.8
Q ss_pred HHHHHHHHHhCCCEEEeC-ceEEEeCC--e---EEEcCCcEEEeeEEEEcCCCCCchhhhccC
Q 023375 71 RHYATTQLSKSGVRLVRG-IVKDVDSQ--K---LILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127 (283)
Q Consensus 71 ~~~~~~~l~~~gV~v~~~-~V~~v~~~--~---v~~~~g~~i~~d~vi~a~G~~~~~~~~~~~ 127 (283)
...+.+.+++.|++++.+ +|++++.+ . |++.+| ++.+|.||+|+|.....+...++
T Consensus 152 ~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g 213 (382)
T 1y56_B 152 TTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAG 213 (382)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHT
T ss_pred HHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcC
Confidence 344556677889999998 89988642 2 556666 79999999999987655544433
No 182
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.43 E-value=1.4e-06 Score=83.08 Aligned_cols=92 Identities=17% Similarity=0.247 Sum_probs=69.8
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-C-CC-----C------------------C----
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-E-IL-----S------------------S---- 65 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~-~l-----~------------------~---- 65 (283)
..|+|||||++|+++|..+++.+ .+|+|||++ . +. | .
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G--------------~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~ 94 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMG--------------QQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAK 94 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHH
T ss_pred CCEEEECChHHHHHHHHHHHhCC--------------CCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHH
Confidence 58999999999999999999987 899999975 1 11 0 0
Q ss_pred --------------------------CC-HHHHHHHHHHHHh-CCCEEEeCceEEEe--CC---eEEEcCCcEEEeeEEE
Q 023375 66 --------------------------FD-DRLRHYATTQLSK-SGVRLVRGIVKDVD--SQ---KLILNDGTEVPYGLLV 112 (283)
Q Consensus 66 --------------------------~~-~~~~~~~~~~l~~-~gV~v~~~~V~~v~--~~---~v~~~~g~~i~~d~vi 112 (283)
.+ ..+...+.+.+++ .||+++..+|+++. ++ +|.+.+|+++.+|.||
T Consensus 95 ~~d~~gi~f~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VV 174 (651)
T 3ces_A 95 AIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVV 174 (651)
T ss_dssp HHHHHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEE
T ss_pred HhhhcccchhhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEE
Confidence 00 1344556667777 69999655888884 33 4677788899999999
Q ss_pred EcCCCCCc
Q 023375 113 WSTGVGPS 120 (283)
Q Consensus 113 ~a~G~~~~ 120 (283)
+|+|..+.
T Consensus 175 LATGt~s~ 182 (651)
T 3ces_A 175 LTVGTFLD 182 (651)
T ss_dssp ECCSTTTC
T ss_pred EcCCCCcc
Confidence 99998754
No 183
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.42 E-value=5.2e-08 Score=85.63 Aligned_cols=54 Identities=9% Similarity=0.013 Sum_probs=37.3
Q ss_pred ccccCCCcccCCCCCEEEeccccccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 135 RIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 135 ~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
.+.++..+++ +.|+||++||++...++... .-++...++.+|+.+|+.|.+.+.
T Consensus 272 ~iv~~~~~~t-~vpGv~aaGDaa~~v~g~~r--mGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 272 DVVIHSGAYA-GVDNMYFAGMEVAELDGLNR--MGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp HHHHHCEECT-TSBTEEECTHHHHHHHTCCB--CCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEECCCeEE-CCCCEEEEchHhccccCCCc--CchHHHHHHHHHHHHHHHHHHHhc
Confidence 4666777777 89999999999864322100 012344567889999999988764
No 184
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.42 E-value=1.8e-06 Score=77.54 Aligned_cols=92 Identities=13% Similarity=0.219 Sum_probs=69.9
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCC------CC------------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------LS------------------------ 64 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~------l~------------------------ 64 (283)
.+|+|||||++|+.+|..|++.+ .+|+|+|+... ..
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G--------------~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~ 68 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAG--------------IDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARD 68 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHT--------------CCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHH
T ss_pred ccEEEECCCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhc
Confidence 47999999999999999999887 78888886521 00
Q ss_pred -------------------------C-----CC-HHHHHHHHHHHHhCCCEEEeC-ceEEEeCC-----eEEE-cCCc--
Q 023375 65 -------------------------S-----FD-DRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLIL-NDGT-- 104 (283)
Q Consensus 65 -------------------------~-----~~-~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~-----~v~~-~~g~-- 104 (283)
. ++ ..+...+.+.+.+.|++++.+ +|++++.+ .|++ .+|+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~ 148 (394)
T 1k0i_A 69 GLVHEGVEIAFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERL 148 (394)
T ss_dssp CEEESCEEEEETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEE
T ss_pred CCccceEEEEECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEE
Confidence 0 01 234455666677789999999 89998642 4666 6887
Q ss_pred EEEeeEEEEcCCCCCc
Q 023375 105 EVPYGLLVWSTGVGPS 120 (283)
Q Consensus 105 ~i~~d~vi~a~G~~~~ 120 (283)
++.+|.||.|.|..+.
T Consensus 149 ~~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 149 RLDCDYIAGCDGFHGI 164 (394)
T ss_dssp EEECSEEEECCCTTCS
T ss_pred EEEeCEEEECCCCCcH
Confidence 7999999999998765
No 185
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.42 E-value=1.9e-06 Score=80.92 Aligned_cols=92 Identities=18% Similarity=0.246 Sum_probs=69.5
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CC--------CCC-------------C------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EI--------LSS-------------F------ 66 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~--------l~~-------------~------ 66 (283)
.+|+|||||++|+.+|..|++.+ .+|+|+|+. .+ .|. +
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G--------------~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~ 82 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELG--------------RSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQ 82 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhh
Confidence 58999999999999999999876 899999985 32 110 0
Q ss_pred ----------CHHHHHHHHHHHHhCC--CEEEeC-ceEEEe--CC----eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 67 ----------DDRLRHYATTQLSKSG--VRLVRG-IVKDVD--SQ----KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 67 ----------~~~~~~~~~~~l~~~g--V~v~~~-~V~~v~--~~----~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
.+++.+++....++.+ ++++.+ +|++++ ++ .|++++|+++.+|.||.|+|....
T Consensus 83 ~~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~ 155 (542)
T 1w4x_A 83 EWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSV 155 (542)
T ss_dssp HCCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCC
T ss_pred ccCcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCC
Confidence 1345666666667766 568888 788875 22 477788889999999999996433
No 186
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.40 E-value=1.4e-07 Score=86.96 Aligned_cols=90 Identities=18% Similarity=0.203 Sum_probs=67.8
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCC--------CCC--CHHHHHHHHHHHHhC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL--------SSF--DDRLRHYATTQLSKS 81 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l--------~~~--~~~~~~~~~~~l~~~ 81 (283)
..++|+|||||++|+++|..|++.+. +.+|++|++. .+. |.. ..++..++.+.+++.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~------------~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~ 72 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHS------------RAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSD 72 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCS------------SCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTST
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCC------------CCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhC
Confidence 45799999999999999999987642 2899999986 443 322 235667778888899
Q ss_pred CCEEEeC-ceEEEeCCeEEEcCCcEEEeeEEEEcCCCCC
Q 023375 82 GVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119 (283)
Q Consensus 82 gV~v~~~-~V~~v~~~~v~~~~g~~i~~d~vi~a~G~~~ 119 (283)
||+++.+ .|. ..|.+++ .++.||.||+|||..+
T Consensus 73 gv~~~~~~~v~----~~V~~~~-~~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 73 RCAFYGNVEVG----RDVTVQE-LQDAYHAVVLSYGAED 106 (460)
T ss_dssp TEEEEBSCCBT----TTBCHHH-HHHHSSEEEECCCCCE
T ss_pred CcEEEeeeEEe----eEEEecc-ceEEcCEEEEecCcCC
Confidence 9999998 552 3344444 3468999999999985
No 187
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.40 E-value=1.1e-06 Score=78.84 Aligned_cols=58 Identities=12% Similarity=0.146 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEeC--C---eEEEcCCcEEEeeEEEEcCCCCCchhhhccC
Q 023375 69 RLRHYATTQLSKSGVRLVRG-IVKDVDS--Q---KLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127 (283)
Q Consensus 69 ~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~---~v~~~~g~~i~~d~vi~a~G~~~~~~~~~~~ 127 (283)
.+...+.+.+++.|++++.+ +|+++.. + .|++.+| ++.+|.||+|+|.....+...++
T Consensus 175 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g 238 (405)
T 2gag_B 175 HVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAG 238 (405)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcC
Confidence 44555667778889999998 8998863 2 3566666 79999999999987655544444
No 188
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.40 E-value=2.1e-06 Score=81.58 Aligned_cols=92 Identities=21% Similarity=0.287 Sum_probs=69.3
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCC---------------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSF--------------------------- 66 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~--------------------------- 66 (283)
..|+|||||++|+++|..+++.+ .+|+|||++ ..+..+
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G--------------~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~ 93 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMG--------------AKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGK 93 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHH
Confidence 58999999999999999999987 899999875 111000
Q ss_pred ----------------------------CHHHHHHHHHHHHh-CCCEEEeCceEEEe--CC---eEEEcCCcEEEeeEEE
Q 023375 67 ----------------------------DDRLRHYATTQLSK-SGVRLVRGIVKDVD--SQ---KLILNDGTEVPYGLLV 112 (283)
Q Consensus 67 ----------------------------~~~~~~~~~~~l~~-~gV~v~~~~V~~v~--~~---~v~~~~g~~i~~d~vi 112 (283)
...+...+.+.+++ .||+++..+|+++. ++ +|.+.+|+++.+|.||
T Consensus 94 ~~d~~gi~f~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVV 173 (637)
T 2zxi_A 94 AIDQTGIQFKMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVV 173 (637)
T ss_dssp HHHHHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEE
T ss_pred HhhhcccceeecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEE
Confidence 01234555666777 59999655888874 33 3778889999999999
Q ss_pred EcCCCCCc
Q 023375 113 WSTGVGPS 120 (283)
Q Consensus 113 ~a~G~~~~ 120 (283)
+|+|..++
T Consensus 174 LATG~~s~ 181 (637)
T 2zxi_A 174 VTTGTFLN 181 (637)
T ss_dssp ECCTTCBT
T ss_pred EccCCCcc
Confidence 99998754
No 189
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.40 E-value=1.4e-07 Score=95.07 Aligned_cols=91 Identities=16% Similarity=0.309 Sum_probs=71.1
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCcc-EEEEEeCC-CCC-------C--CCCHHHHHHHHHHHHhC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN-EIL-------S--SFDDRLRHYATTQLSKS 81 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~-~V~li~~~-~~l-------~--~~~~~~~~~~~~~l~~~ 81 (283)
..++|+|||||++|+.+|..|++.+ . +|+|||+. .+. | .++.+..++..+.+++.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G--------------~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~ 251 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLG--------------YSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDL 251 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTT--------------CCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTT
T ss_pred CCCEEEEECccHHHHHHHHHHHhcC--------------CCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHC
Confidence 4578999999999999999999887 6 79999986 332 2 23566677777889999
Q ss_pred CCEEEeC-ceEEEeCCeEEEcCCcEEEeeEEEEcCCC-CCc
Q 023375 82 GVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGV-GPS 120 (283)
Q Consensus 82 gV~v~~~-~V~~v~~~~v~~~~g~~i~~d~vi~a~G~-~~~ 120 (283)
||+++++ .+. ...++++++.++.+|.||+|||. +|.
T Consensus 252 gv~~~~~~~v~---~~~v~~~~~~~~~~d~vvlAtGa~~p~ 289 (1025)
T 1gte_A 252 GVKIICGKSLS---ENEITLNTLKEEGYKAAFIGIGLPEPK 289 (1025)
T ss_dssp TCEEEESCCBS---TTSBCHHHHHHTTCCEEEECCCCCEEC
T ss_pred CcEEEcccEec---cceEEhhhcCccCCCEEEEecCCCCCC
Confidence 9999998 452 13455555556789999999998 465
No 190
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.39 E-value=4e-07 Score=84.20 Aligned_cols=92 Identities=21% Similarity=0.359 Sum_probs=68.9
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCC-----------------------------
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS----------------------------- 64 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~----------------------------- 64 (283)
..+|+|||||++|+.+|..|++.+ .+|+|||++.+..
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G--------------~~V~liE~~~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~ 85 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELG--------------ARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADY 85 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEecCCCCCcccccCccchHHHHHHHHHHHHHHHHHhc
Confidence 468999999999999999999887 8999999765310
Q ss_pred -------CCC------------HHHHHHHHHHHHhCCCEEEeCceEEEeCC--eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 65 -------SFD------------DRLRHYATTQLSKSGVRLVRGIVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 65 -------~~~------------~~~~~~~~~~l~~~gV~v~~~~V~~v~~~--~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
.++ ..+.......+++.||+++.+.+..++.+ .|. .+++++.+|.+|+|||.+|.
T Consensus 86 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~-~~g~~~~~d~lviAtG~~p~ 161 (478)
T 3dk9_A 86 GFPSCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIE-VSGKKYTAPHILIATGGMPS 161 (478)
T ss_dssp TSCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEE-ETTEEEECSCEEECCCEEEC
T ss_pred CccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEE-ECCEEEEeeEEEEccCCCCC
Confidence 011 12223344556778999999876666554 344 56788999999999998776
No 191
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.39 E-value=1.2e-07 Score=87.29 Aligned_cols=93 Identities=12% Similarity=0.141 Sum_probs=67.9
Q ss_pred cCeEEEEccCcHHHHHHHHHHH-hhhhHHHhhcCCCCCccEEEEEeCC-CCC--------CC--CCHHHHHHHHHHHHhC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSD-FIMRDVRQRYSHVKDYIHVTLIEAN-EIL--------SS--FDDRLRHYATTQLSKS 81 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~-~~~~~~~~~~~~~~~~~~V~li~~~-~~l--------~~--~~~~~~~~~~~~l~~~ 81 (283)
.++|+|||||++|+.+|..|++ ..+. ...+.+|+||++. .+. |. ...++..++.+.+++.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~--------~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~ 74 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTT--------EDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDP 74 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHS--------TTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTST
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccc--------cCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcC
Confidence 4689999999999999999988 6210 0012899999987 432 21 2235667778888889
Q ss_pred CCEEEeC-ceEEEeCCeEEEcCCcEEEeeEEEEcCCCCC
Q 023375 82 GVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119 (283)
Q Consensus 82 gV~v~~~-~V~~v~~~~v~~~~g~~i~~d~vi~a~G~~~ 119 (283)
||+++.+ .+ ...|+++++ ++.||.||+|+|..+
T Consensus 75 ~v~~~~~v~v----~~~v~~~~~-~~~~d~lViAtG~~~ 108 (456)
T 1lqt_A 75 RFRFFGNVVV----GEHVQPGEL-SERYDAVIYAVGAQS 108 (456)
T ss_dssp TEEEEESCCB----TTTBCHHHH-HHHSSEEEECCCCCE
T ss_pred CCEEEeeEEE----CCEEEECCC-eEeCCEEEEeeCCCC
Confidence 9999988 43 344555555 478999999999973
No 192
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.38 E-value=7.3e-07 Score=82.11 Aligned_cols=92 Identities=23% Similarity=0.293 Sum_probs=66.5
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCC---------CC--------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---------SS-------------------- 65 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l---------~~-------------------- 65 (283)
.+|+|||||++|+.+|..|++.+ .+|+|||+..+. |.
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~~G--------------~~V~liE~~~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~ 69 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQLG--------------LSTAIVEPKYWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAF 69 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHHHHHhc
Confidence 47999999999999999999876 899999986321 00
Q ss_pred -------CC-H-----------HHHHHHHHHHHhCCCEEEeCceEEEeCCeE--EEcCC--cEEEeeEEEEcCCCCCc
Q 023375 66 -------FD-D-----------RLRHYATTQLSKSGVRLVRGIVKDVDSQKL--ILNDG--TEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 66 -------~~-~-----------~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v--~~~~g--~~i~~d~vi~a~G~~~~ 120 (283)
.+ + .+...+.+.+++.||+++.+....++.+.+ .+.+| +++.+|.+|+|+|..|.
T Consensus 70 g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~ 147 (464)
T 2a8x_A 70 GISGEVTFDYGIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTR 147 (464)
T ss_dssp TEEECCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCEEEC
T ss_pred CCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCCCCC
Confidence 00 0 011223456777899999884333555544 44567 68999999999999876
No 193
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.38 E-value=2.2e-06 Score=77.28 Aligned_cols=93 Identities=19% Similarity=0.254 Sum_probs=67.3
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCC-----C-------------------
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-----F------------------- 66 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~-----~------------------- 66 (283)
.+..+|+|||||++|+.+|..|++.+ .+|+|+|+. ..-+. +
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G--------------~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~ 86 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSG--------------IDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMET 86 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHh
Confidence 44579999999999999999999987 889999875 22100 0
Q ss_pred ---------------------------------------CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--C--eEEEcC
Q 023375 67 ---------------------------------------DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q--KLILND 102 (283)
Q Consensus 67 ---------------------------------------~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~--~v~~~~ 102 (283)
...+.+.+.+.+.+ ++++.+ +|++++. + .|++++
T Consensus 87 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~ 164 (407)
T 3rp8_A 87 FGGPLRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTD 164 (407)
T ss_dssp HSCCCCEEEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEETT
T ss_pred hcCCCcceEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEcC
Confidence 01233444444444 788888 7888854 3 466789
Q ss_pred CcEEEeeEEEEcCCCCCc
Q 023375 103 GTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 103 g~~i~~d~vi~a~G~~~~ 120 (283)
|+++.+|.||.|.|....
T Consensus 165 g~~~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 165 GSSASGDLLIAADGSHSA 182 (407)
T ss_dssp SCEEEESEEEECCCTTCS
T ss_pred CCEEeeCEEEECCCcChH
Confidence 999999999999998765
No 194
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.36 E-value=2e-06 Score=78.01 Aligned_cols=76 Identities=16% Similarity=0.189 Sum_probs=53.7
Q ss_pred HhCCCEEEeC-ceEEEeCC----eEEEcCCcEEEeeEEEEcCC--------CCCc-hh--hhccCCCCCCCCccccCCCc
Q 023375 79 SKSGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTG--------VGPS-TL--VKSLDLPKSPGGRIGIDEWL 142 (283)
Q Consensus 79 ~~~gV~v~~~-~V~~v~~~----~v~~~~g~~i~~d~vi~a~G--------~~~~-~~--~~~~~l~~~~~g~i~Vd~~l 142 (283)
++.| +++++ +|++|+.+ .|++++|+++.+|.||+|+| +.|+ +. .+.+.. ......+.|+..+
T Consensus 215 ~~~g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~-~~~~~~~kv~~~~ 292 (431)
T 3k7m_X 215 QEIP-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEE-GHGGQGLKILIHV 292 (431)
T ss_dssp TTCS-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHH-CCCCCEEEEEEEE
T ss_pred hhCC-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHh-CCCcceEEEEEEE
Confidence 3456 89999 89999754 36667888899999999999 6665 21 111111 1122348889888
Q ss_pred ccCCCCCEEEecccc
Q 023375 143 RVPSVQDVFAVGDCS 157 (283)
Q Consensus 143 ~~~~~~~VfaiGD~a 157 (283)
++ ..+++|+.||+.
T Consensus 293 ~~-~~~~i~~~~d~~ 306 (431)
T 3k7m_X 293 RG-AEAGIECVGDGI 306 (431)
T ss_dssp ES-CCTTEEEEBSSS
T ss_pred CC-CCcCceEcCCCC
Confidence 88 679999999983
No 195
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.36 E-value=2.4e-06 Score=75.81 Aligned_cols=54 Identities=13% Similarity=0.070 Sum_probs=39.7
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceEEEeCC----eEEEcCCcEEEeeEEEEcCCCCCchhhh
Q 023375 70 LRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPSTLVK 124 (283)
Q Consensus 70 ~~~~~~~~l~~~gV~v~~~-~V~~v~~~----~v~~~~g~~i~~d~vi~a~G~~~~~~~~ 124 (283)
+...+.+.+++.|++++.+ +|++++.+ .|.+.+| ++.+|.||+|+|.....+..
T Consensus 151 l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~ 209 (372)
T 2uzz_A 151 AIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWVKDLLP 209 (372)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGGGGTST
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccHHhhcc
Confidence 3445556677889999998 89988642 3555566 59999999999986655544
No 196
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.36 E-value=3.8e-06 Score=79.73 Aligned_cols=93 Identities=20% Similarity=0.311 Sum_probs=71.1
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCC-----------------------------
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS----------------------------- 64 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~----------------------------- 64 (283)
..+|+|||||++|+.+|..|++.+ .+|+|||+..+..
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G--------------~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~ 88 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLG--------------HDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNY 88 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCC--------------CCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCC
Confidence 368999999999999999999876 7888888752100
Q ss_pred -----------------------------------CC-CHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC-----eEEEc-
Q 023375 65 -----------------------------------SF-DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLILN- 101 (283)
Q Consensus 65 -----------------------------------~~-~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~-----~v~~~- 101 (283)
.+ ...+...+.+.+++.||+++.+ +|+++..+ .|++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~ 168 (591)
T 3i3l_A 89 VKKPSATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRR 168 (591)
T ss_dssp EEECEEEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEE
T ss_pred cccCCcEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEec
Confidence 00 1345566677778899999999 89998743 46666
Q ss_pred CC--cEEEeeEEEEcCCCCCc
Q 023375 102 DG--TEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 102 ~g--~~i~~d~vi~a~G~~~~ 120 (283)
+| +++.+|.||.|+|..+.
T Consensus 169 ~G~~~~i~AdlVV~AdG~~S~ 189 (591)
T 3i3l_A 169 GGESVTVESDFVIDAGGSGGP 189 (591)
T ss_dssp TTEEEEEEESEEEECCGGGCH
T ss_pred CCceEEEEcCEEEECCCCcch
Confidence 66 57999999999998653
No 197
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.35 E-value=2.4e-06 Score=81.26 Aligned_cols=93 Identities=19% Similarity=0.303 Sum_probs=69.8
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCC---------------------------
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS--------------------------- 65 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~--------------------------- 65 (283)
...|+|||||++|+++|..+++.+ .+|+|+++. ..+..
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G--------------~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~ 86 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGG--------------LHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMG 86 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHH
T ss_pred cCCEEEECccHHHHHHHHHHHHCC--------------CcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHH
Confidence 358999999999999999999987 889999875 11100
Q ss_pred ---------------------------CC-HHHHHHHHHHHHhC-CCEEEeCceEEEe--CCe---EEEcCCcEEEeeEE
Q 023375 66 ---------------------------FD-DRLRHYATTQLSKS-GVRLVRGIVKDVD--SQK---LILNDGTEVPYGLL 111 (283)
Q Consensus 66 ---------------------------~~-~~~~~~~~~~l~~~-gV~v~~~~V~~v~--~~~---v~~~~g~~i~~d~v 111 (283)
.+ ..+...+.+.+++. ||+++.+.|+++. ++. |.+.+|+++.+|.|
T Consensus 87 ~~~d~~gi~f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~V 166 (641)
T 3cp8_A 87 KAIDATGIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSGRAIQAKAA 166 (641)
T ss_dssp HHHHHHEEEEEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCEEEEEEE
T ss_pred HHHHhcCCchhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCCcEEEeCEE
Confidence 00 13455566667774 9999766887764 443 67788889999999
Q ss_pred EEcCCCCCc
Q 023375 112 VWSTGVGPS 120 (283)
Q Consensus 112 i~a~G~~~~ 120 (283)
|+|+|..++
T Consensus 167 VLATG~~s~ 175 (641)
T 3cp8_A 167 ILACGTFLN 175 (641)
T ss_dssp EECCTTCBT
T ss_pred EECcCCCCC
Confidence 999998754
No 198
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.35 E-value=4.3e-07 Score=81.59 Aligned_cols=93 Identities=24% Similarity=0.322 Sum_probs=68.6
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCC-C------CCC-----C-CHHHHH-HHHHHHHh
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-I------LSS-----F-DDRLRH-YATTQLSK 80 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~-~------l~~-----~-~~~~~~-~~~~~l~~ 80 (283)
.+|+|||||++|+.+|..|++.+. +.+|++++++. . ++. . ..++.. ...+.+++
T Consensus 5 ~dvvIIG~G~aGl~aA~~l~~~g~------------~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 72 (384)
T 2v3a_A 5 APLVIIGTGLAGYNLAREWRKLDG------------ETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQ 72 (384)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCS------------SSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHH
T ss_pred CcEEEECChHHHHHHHHHHHhhCC------------CCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHh
Confidence 589999999999999999988752 26799998752 1 110 1 122221 24555678
Q ss_pred CCCEEEeC-ceEEEeC--CeEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 81 SGVRLVRG-IVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 81 ~gV~v~~~-~V~~v~~--~~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
.||+++.+ +++.++. ..|.+.+ +++.+|.+|+|||.+|.
T Consensus 73 ~~v~~~~~~~v~~i~~~~~~v~~~~-~~~~~d~lviAtG~~p~ 114 (384)
T 2v3a_A 73 LNARILTHTRVTGIDPGHQRIWIGE-EEVRYRDLVLAWGAEPI 114 (384)
T ss_dssp TTCEEECSCCCCEEEGGGTEEEETT-EEEECSEEEECCCEEEC
T ss_pred CCcEEEeCCEEEEEECCCCEEEECC-cEEECCEEEEeCCCCcC
Confidence 89999988 7888875 4677754 57999999999999876
No 199
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.34 E-value=3.6e-06 Score=75.10 Aligned_cols=58 Identities=19% Similarity=0.205 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEeCC--e--EEEcCCcEEEeeEEEEcCCCCCchhhhccC
Q 023375 69 RLRHYATTQLSKSGVRLVRG-IVKDVDSQ--K--LILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127 (283)
Q Consensus 69 ~~~~~~~~~l~~~gV~v~~~-~V~~v~~~--~--v~~~~g~~i~~d~vi~a~G~~~~~~~~~~~ 127 (283)
.+...+.+.+++.|++++.+ +|++++.+ . |.+.+| ++.+|.||+|+|..+..+...++
T Consensus 151 ~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~~l~~~~g 213 (389)
T 2gf3_A 151 NCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNSKLLSKLN 213 (389)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHHHHGGGGT
T ss_pred HHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHHHHhhhhc
Confidence 44455666777889999998 89988643 2 444444 79999999999987766655544
No 200
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.33 E-value=1e-05 Score=71.34 Aligned_cols=160 Identities=16% Similarity=0.182 Sum_probs=98.7
Q ss_pred cCeEEEEccCcHHHHHHHHHHHh--hhhHHHhhcCCCCCccEEEEEeCC-CCCCC-------------------------
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDF--IMRDVRQRYSHVKDYIHVTLIEAN-EILSS------------------------- 65 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~--~~~~~~~~~~~~~~~~~V~li~~~-~~l~~------------------------- 65 (283)
...|+|||||++|+.+|..|++. + .+|+|||+. .+...
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G--------------~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~G 144 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPD--------------LRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVG 144 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTT--------------SCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCC--------------CEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcC
Confidence 35899999999999999999986 5 899999986 22100
Q ss_pred --C-----------CHHHHHHHHHHHHh-CCCEEEeC-ceEEEe--C-----------------C-----eEEEc-----
Q 023375 66 --F-----------DDRLRHYATTQLSK-SGVRLVRG-IVKDVD--S-----------------Q-----KLILN----- 101 (283)
Q Consensus 66 --~-----------~~~~~~~~~~~l~~-~gV~v~~~-~V~~v~--~-----------------~-----~v~~~----- 101 (283)
+ ...+.+.+.+.+.+ .||+++.+ .++++. + + +|.+.
T Consensus 145 v~~~~~G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~ 224 (344)
T 3jsk_A 145 VPYEDEGDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVS 224 (344)
T ss_dssp CCCEECSSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHH
T ss_pred CcccccCCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeee
Confidence 0 12333455555666 59999998 777663 1 1 23321
Q ss_pred ---------CCcEEEeeEEEEcCCCCCc--h-h---hhccCCCCCCCC----------ccccCCCcccCCCCCEEEeccc
Q 023375 102 ---------DGTEVPYGLLVWSTGVGPS--T-L---VKSLDLPKSPGG----------RIGIDEWLRVPSVQDVFAVGDC 156 (283)
Q Consensus 102 ---------~g~~i~~d~vi~a~G~~~~--~-~---~~~~~l~~~~~g----------~i~Vd~~l~~~~~~~VfaiGD~ 156 (283)
+..++.++.||.|+|.... . + +..+++...-.| ...|+.+-++ +|++|+.|=.
T Consensus 225 ~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v--~~gl~~~gm~ 302 (344)
T 3jsk_A 225 MHHDDQSAMDPNTINAPVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREI--VPGLIVGGME 302 (344)
T ss_dssp TTSSSSSCCBCEEEECSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEE--ETTEEECGGG
T ss_pred ccCCcccccCceEEEcCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceE--cCCEEEechh
Confidence 2247999999999998765 1 1 223343210011 2334444454 7999999987
Q ss_pred cccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 157 SGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 157 a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
++-.. |..-.-++--.-...|+.+|+.|...++
T Consensus 303 ~~~~~--g~~rmgp~fg~m~~sg~~~a~~~~~~~~ 335 (344)
T 3jsk_A 303 LSEID--GANRMGPTFGAMALSGVKAAHEAIRVFD 335 (344)
T ss_dssp HHHHH--TCEECCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred hHhhc--CCCCCCcccceeeecCHHHHHHHHHHHH
Confidence 65321 2111112222344779999998887765
No 201
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.33 E-value=1.4e-06 Score=80.47 Aligned_cols=92 Identities=22% Similarity=0.333 Sum_probs=67.1
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCC-------CC------------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-------IL------------------------ 63 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~-------~l------------------------ 63 (283)
.+|+|||||++|+.+|..|++.+ .+|+|||++. +.
T Consensus 4 ~DVvVIGgG~aGl~aA~~la~~G--------------~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~ 69 (476)
T 3lad_A 4 FDVIVIGAGPGGYVAAIKSAQLG--------------LKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEA 69 (476)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHT--------------CCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHhCC--------------CEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999887 8999999863 10
Q ss_pred ----CCC---------C------------HHHHHHHHHHHHhCCCEEEeCceEEEeCCeEEE--cCC--cEEEeeEEEEc
Q 023375 64 ----SSF---------D------------DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLIL--NDG--TEVPYGLLVWS 114 (283)
Q Consensus 64 ----~~~---------~------------~~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~--~~g--~~i~~d~vi~a 114 (283)
..+ + ..+.......+++.||+++.+....++++.+.+ .+| +++.+|.+|+|
T Consensus 70 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lvlA 149 (476)
T 3lad_A 70 HESFKLHGISTGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILA 149 (476)
T ss_dssp HTTSGGGTEECSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCEEEECTTSCEEEECCSCEEEC
T ss_pred HHHHHhcCcccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEEEEcCEEEEc
Confidence 000 0 011222334566789999999666677665444 456 57999999999
Q ss_pred CCCCCc
Q 023375 115 TGVGPS 120 (283)
Q Consensus 115 ~G~~~~ 120 (283)
||.+|.
T Consensus 150 tG~~p~ 155 (476)
T 3lad_A 150 SGSKPV 155 (476)
T ss_dssp CCEEEC
T ss_pred CCCCCC
Confidence 999876
No 202
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.33 E-value=1.5e-06 Score=80.54 Aligned_cols=92 Identities=21% Similarity=0.261 Sum_probs=66.6
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCC---------C--------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL---------S-------------------- 64 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l---------~-------------------- 64 (283)
.+|+|||||+.|+.+|..|++.+ .+|+|||+. .+. |
T Consensus 7 ~dVvIIGaG~aGl~aA~~l~~~G--------------~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~ 72 (482)
T 1ojt_A 7 YDVVVLGGGPGGYSAAFAAADEG--------------LKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAAN 72 (482)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhC
Confidence 57999999999999999999876 899999985 331 0
Q ss_pred -------CCCH-H-----------HHHHHHHHHHhCCCEEEeCceEEEeCCeEEE--cCC------------cEEEeeEE
Q 023375 65 -------SFDD-R-----------LRHYATTQLSKSGVRLVRGIVKDVDSQKLIL--NDG------------TEVPYGLL 111 (283)
Q Consensus 65 -------~~~~-~-----------~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~--~~g------------~~i~~d~v 111 (283)
.++. . +...+.+.+++.||+++.+....++++.+.+ .+| +++.+|.+
T Consensus 73 gi~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~l 152 (482)
T 1ojt_A 73 GIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNC 152 (482)
T ss_dssp TCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEE
T ss_pred CcccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCEEEEEecCCcccccccccCcceEEEcCEE
Confidence 0111 1 1112345567789999988433466666554 345 67999999
Q ss_pred EEcCCCCCc
Q 023375 112 VWSTGVGPS 120 (283)
Q Consensus 112 i~a~G~~~~ 120 (283)
|+|+|..|.
T Consensus 153 ViAtGs~p~ 161 (482)
T 1ojt_A 153 IIAAGSRVT 161 (482)
T ss_dssp EECCCEEEC
T ss_pred EECCCCCCC
Confidence 999999876
No 203
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.32 E-value=2.4e-06 Score=80.77 Aligned_cols=51 Identities=12% Similarity=0.000 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceEEEe--C-C---eEEEc--CCc--EEEeeEEEEcCCCCCc
Q 023375 70 LRHYATTQLSKSGVRLVRG-IVKDVD--S-Q---KLILN--DGT--EVPYGLLVWSTGVGPS 120 (283)
Q Consensus 70 ~~~~~~~~l~~~gV~v~~~-~V~~v~--~-~---~v~~~--~g~--~i~~d~vi~a~G~~~~ 120 (283)
+...+.+.+++.||+++++ +|+++. + + +|++. +|+ ++.+|.||+|+|....
T Consensus 257 l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 257 VVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp HHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCccc
Confidence 4455566677889999999 898885 2 2 25554 675 6899999999998653
No 204
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.31 E-value=4.6e-06 Score=77.98 Aligned_cols=92 Identities=18% Similarity=0.262 Sum_probs=67.7
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCC--------CCC----------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE--------ILS---------------------- 64 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~--------~l~---------------------- 64 (283)
.+|+|||||+.|+.+|..|++.+ .+|+|||+.. .+.
T Consensus 33 ~DVvVIGgGpaGl~aA~~la~~G--------------~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~ 98 (519)
T 3qfa_A 33 YDLIIIGGGSGGLAAAKEAAQYG--------------KKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQ 98 (519)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHH
Confidence 58999999999999999999887 8999999731 000
Q ss_pred ----------------CCC-H-----------HHHHHHHHHHHhCCCEEEeCceEEEeCCeEEE--cCCc--EEEeeEEE
Q 023375 65 ----------------SFD-D-----------RLRHYATTQLSKSGVRLVRGIVKDVDSQKLIL--NDGT--EVPYGLLV 112 (283)
Q Consensus 65 ----------------~~~-~-----------~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~--~~g~--~i~~d~vi 112 (283)
..+ + .+.......+++.+|+++.+.+..++++.+.+ .+|+ ++.+|.+|
T Consensus 99 ~~~~~~~~g~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~~~~i~~d~lV 178 (519)
T 3qfa_A 99 ALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFL 178 (519)
T ss_dssp HHHHHHHTTBCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCCCEEEEEEEE
T ss_pred HHHHHHhcCcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEcCCCCEEEEECCEEE
Confidence 000 0 11112234567789999999877788886655 3454 79999999
Q ss_pred EcCCCCCc
Q 023375 113 WSTGVGPS 120 (283)
Q Consensus 113 ~a~G~~~~ 120 (283)
+|||.+|.
T Consensus 179 iATGs~p~ 186 (519)
T 3qfa_A 179 IATGERPR 186 (519)
T ss_dssp ECCCEEEC
T ss_pred EECCCCcC
Confidence 99998876
No 205
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.31 E-value=3.3e-06 Score=74.06 Aligned_cols=160 Identities=14% Similarity=0.164 Sum_probs=95.9
Q ss_pred CeEEEEccCcHHHHHHHHHHHh--hhhHHHhhcCCCCCccEEEEEeCC-CCCCC--------------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDF--IMRDVRQRYSHVKDYIHVTLIEAN-EILSS-------------------------- 65 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~--~~~~~~~~~~~~~~~~~V~li~~~-~~l~~-------------------------- 65 (283)
.+|+|||||++|+.+|..|++. + .+|+|+|+. .....
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g--------------~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv 131 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPD--------------LKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEI 131 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTT--------------SCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTC
T ss_pred CCEEEECccHHHHHHHHHHHhcCCC--------------CeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCc
Confidence 3899999999999999999987 5 899999985 22100
Q ss_pred ------------CCHHHHHHHHHHHHh-CCCEEEeC-ceEEEeC----C-------eEEEc--------------CCcEE
Q 023375 66 ------------FDDRLRHYATTQLSK-SGVRLVRG-IVKDVDS----Q-------KLILN--------------DGTEV 106 (283)
Q Consensus 66 ------------~~~~~~~~~~~~l~~-~gV~v~~~-~V~~v~~----~-------~v~~~--------------~g~~i 106 (283)
....+...+.+.+.+ .||+++.+ +|+++.. + +|.+. ++.++
T Consensus 132 ~~~~~g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I 211 (326)
T 2gjc_A 132 PYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVI 211 (326)
T ss_dssp CCEECSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEE
T ss_pred ccccCCCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEE
Confidence 012334455555666 49999988 7887731 1 23331 34579
Q ss_pred Ee---------------eEEEEcCCCCCc--hhhhc----cCCC----------CCCCCccccCCCcccCCCCCEEEecc
Q 023375 107 PY---------------GLLVWSTGVGPS--TLVKS----LDLP----------KSPGGRIGIDEWLRVPSVQDVFAVGD 155 (283)
Q Consensus 107 ~~---------------d~vi~a~G~~~~--~~~~~----~~l~----------~~~~g~i~Vd~~l~~~~~~~VfaiGD 155 (283)
.+ +.||.|+|..+. .++.. ++.. .+..-...|+.+-...-+|++|+.|-
T Consensus 212 ~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~~~~~~~g~ 291 (326)
T 2gjc_A 212 ELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGM 291 (326)
T ss_dssp EESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHHHHHHHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTSTTEEECTH
T ss_pred EEeeccccccccccccCCEEEECcCCCchHHHHHHhhccccccccccCceeccccccchhheeecCCCccccCCEEECCh
Confidence 99 999999998764 22211 1111 00001133343434224899999998
Q ss_pred ccccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHh
Q 023375 156 CSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIG 190 (283)
Q Consensus 156 ~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~ 190 (283)
.++... |..-.-++--.-...|+.+|+.|...+
T Consensus 292 ~~~~~~--~~~r~g~~fg~m~~sg~~~a~~~~~~~ 324 (326)
T 2gjc_A 292 EVAELD--GLNRMGPTFGAMALSGVHAAEQILKHF 324 (326)
T ss_dssp HHHHHH--TCCBCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhc--CCCCCChhhhhhhhhhHHHHHHHHHHh
Confidence 764322 110111222234477999999887665
No 206
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.28 E-value=6.3e-06 Score=79.51 Aligned_cols=56 Identities=13% Similarity=0.218 Sum_probs=40.7
Q ss_pred HHHHHHhCCCEEEeC-ceEEEeC--Ce--EEEcCCcEEEeeEEEEcCCCCCchhhhccCCC
Q 023375 74 ATTQLSKSGVRLVRG-IVKDVDS--QK--LILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 129 (283)
Q Consensus 74 ~~~~l~~~gV~v~~~-~V~~v~~--~~--v~~~~g~~i~~d~vi~a~G~~~~~~~~~~~l~ 129 (283)
+.+.+++.|++++.+ +|+++.. +. |.+.+|+++.+|.||+|+|.....+....+++
T Consensus 423 L~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~~l~~~~~lp 483 (676)
T 3ps9_A 423 VLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSQTSTLP 483 (676)
T ss_dssp HHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGGCSTTTTTCS
T ss_pred HHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchhccccccCCc
Confidence 444556789999999 8988853 33 55667788999999999998765554444443
No 207
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.28 E-value=4.6e-06 Score=74.56 Aligned_cols=91 Identities=20% Similarity=0.282 Sum_probs=66.9
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCC-CC--------------------CC--------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-IL--------------------SS-------- 65 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~-~l--------------------~~-------- 65 (283)
.+|+|||||++|+.+|..|++.+ .+|+|+|+.. +. +.
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G--------------~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~ 70 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYG--------------LKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEV 70 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhc
Confidence 47999999999999999999876 6677776642 10 00
Q ss_pred ---------------C--------------CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--Ce---EEE---cCCcEEE
Q 023375 66 ---------------F--------------DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK---LIL---NDGTEVP 107 (283)
Q Consensus 66 ---------------~--------------~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~~---v~~---~~g~~i~ 107 (283)
+ ...+...+.+.+++.|++++.+ +|++++. +. |++ .+++++.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~ 150 (397)
T 3cgv_A 71 KGARIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVR 150 (397)
T ss_dssp SEEEEECTTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEE
T ss_pred ceEEEEcCCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEE
Confidence 0 0134566677777889999999 8888753 32 555 2456899
Q ss_pred eeEEEEcCCCCC
Q 023375 108 YGLLVWSTGVGP 119 (283)
Q Consensus 108 ~d~vi~a~G~~~ 119 (283)
+|.||.|+|..+
T Consensus 151 a~~vV~A~G~~s 162 (397)
T 3cgv_A 151 AKMVIAADGFES 162 (397)
T ss_dssp EEEEEECCCTTC
T ss_pred cCEEEECCCcch
Confidence 999999999876
No 208
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.27 E-value=5.3e-06 Score=78.83 Aligned_cols=94 Identities=14% Similarity=0.273 Sum_probs=66.9
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CC-------CCC-------------------
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EI-------LSS------------------- 65 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~-------l~~------------------- 65 (283)
...+|+|||||++|+.+|..|++.+ .+|++||+. .. +..
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g--------------~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~ 171 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYG--------------AKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLL 171 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHH
T ss_pred ccccEEEECCCccHHHHHHHHHhCC--------------CeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHH
Confidence 3468999999999999999999887 899999962 10 100
Q ss_pred -------------CC--------HHHHHHH-----------HHHHHhCCCEEEeCceEEEeCCeEEE--cCC--cEEEee
Q 023375 66 -------------FD--------DRLRHYA-----------TTQLSKSGVRLVRGIVKDVDSQKLIL--NDG--TEVPYG 109 (283)
Q Consensus 66 -------------~~--------~~~~~~~-----------~~~l~~~gV~v~~~~V~~v~~~~v~~--~~g--~~i~~d 109 (283)
++ +.+.+++ ...+.+.+|+++.+..+.++...+.+ .+| +++.+|
T Consensus 172 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~~~d 251 (598)
T 2x8g_A 172 SHALEDAEHFGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGN 251 (598)
T ss_dssp HHHHHHHHHTTCCCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEE
T ss_pred HHHHhhHHhCCccccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEEeCCCCeEEEEeC
Confidence 00 1111111 22356779999988777777776655 356 469999
Q ss_pred EEEEcCCCCCc
Q 023375 110 LLVWSTGVGPS 120 (283)
Q Consensus 110 ~vi~a~G~~~~ 120 (283)
.||+|||.+|.
T Consensus 252 ~lviAtGs~p~ 262 (598)
T 2x8g_A 252 KIILATGERPK 262 (598)
T ss_dssp EEEECCCEEEC
T ss_pred EEEEeCCCCCC
Confidence 99999998776
No 209
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.27 E-value=2.9e-06 Score=74.67 Aligned_cols=38 Identities=18% Similarity=0.321 Sum_probs=30.5
Q ss_pred hCCCEEEeC-ceEEEeCC----eEEEcCCcEEEeeEEEEcCCC
Q 023375 80 KSGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGV 117 (283)
Q Consensus 80 ~~gV~v~~~-~V~~v~~~----~v~~~~g~~i~~d~vi~a~G~ 117 (283)
+.|++++++ +|++|+.+ .|++.+|+++.+|.||+|++.
T Consensus 121 ~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 121 ESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPV 163 (342)
T ss_dssp HHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCH
T ss_pred hcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCH
Confidence 348999999 89998643 366678877899999999973
No 210
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.27 E-value=1.6e-06 Score=80.09 Aligned_cols=92 Identities=18% Similarity=0.237 Sum_probs=65.0
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCC----------------------------C
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS----------------------------S 65 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~----------------------------~ 65 (283)
.+|+|||||++|+.+|..|++.+ .+|+|||+. .+.. .
T Consensus 6 ~dVvIIGgG~aGl~aA~~l~~~G--------------~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~ 71 (478)
T 1v59_A 6 HDVVIIGGGPAGYVAAIKAAQLG--------------FNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQK 71 (478)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGG
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHh
Confidence 57999999999999999999876 899999985 3210 0
Q ss_pred ----------CC-HH-----------HHHHHHHHHHhCCCEEEeCceEEEeCCeEE--EcCC--cE------EEeeEEEE
Q 023375 66 ----------FD-DR-----------LRHYATTQLSKSGVRLVRGIVKDVDSQKLI--LNDG--TE------VPYGLLVW 113 (283)
Q Consensus 66 ----------~~-~~-----------~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~--~~~g--~~------i~~d~vi~ 113 (283)
++ +. +...+.+.+++.||+++.+....++++.+. +.+| ++ +.+|.+|+
T Consensus 72 ~gi~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~~~~~~~~i~~d~lVi 151 (478)
T 1v59_A 72 RGIDVNGDIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIV 151 (478)
T ss_dssp GTEEECSCEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSEEEEECCTTCTTCCSSCEEEEEEEEEE
T ss_pred cCcccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcccccccceEEeCEEEE
Confidence 00 01 111234556778999999843223555544 3456 56 99999999
Q ss_pred cCCCCCc
Q 023375 114 STGVGPS 120 (283)
Q Consensus 114 a~G~~~~ 120 (283)
|+|.+|.
T Consensus 152 AtGs~p~ 158 (478)
T 1v59_A 152 ATGSEVT 158 (478)
T ss_dssp CCCEEEC
T ss_pred CcCCCCC
Confidence 9999875
No 211
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.27 E-value=4.9e-06 Score=78.60 Aligned_cols=51 Identities=10% Similarity=0.021 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceEEEe--C-C---eEEEc--CCc--EEEeeEEEEcCCCCCc
Q 023375 70 LRHYATTQLSKSGVRLVRG-IVKDVD--S-Q---KLILN--DGT--EVPYGLLVWSTGVGPS 120 (283)
Q Consensus 70 ~~~~~~~~l~~~gV~v~~~-~V~~v~--~-~---~v~~~--~g~--~i~~d~vi~a~G~~~~ 120 (283)
+...+.+.+++.||+++++ +|+++. + + +|++. +|+ ++.+|.||+|+|....
T Consensus 252 l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 252 IIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp HHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 3345556677889999999 888874 2 3 25554 675 6899999999998764
No 212
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.27 E-value=4.7e-06 Score=78.81 Aligned_cols=91 Identities=24% Similarity=0.343 Sum_probs=69.8
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCC------------------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL------------------------------ 63 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l------------------------------ 63 (283)
..|+|||||++|+.+|.+|++.+ .+|+|||+. ...
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G--------------~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~ 115 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGG--------------VGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQ 115 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTT--------------CCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCC
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCc
Confidence 47999999999999999999887 888888864 110
Q ss_pred -------C-----C---------------C-CHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC----eEEE--cCC-cEEE
Q 023375 64 -------S-----S---------------F-DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLIL--NDG-TEVP 107 (283)
Q Consensus 64 -------~-----~---------------~-~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~----~v~~--~~g-~~i~ 107 (283)
. . + ...+...+.+.+++.|++++.+ +|++++.+ .|++ .+| +++.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~ 195 (570)
T 3fmw_A 116 VAKGLPFAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVR 195 (570)
T ss_dssp BCSBCCBTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEE
T ss_pred ccCCceeCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEE
Confidence 0 0 0 1345666777777789999999 89988654 3555 577 6899
Q ss_pred eeEEEEcCCCCC
Q 023375 108 YGLLVWSTGVGP 119 (283)
Q Consensus 108 ~d~vi~a~G~~~ 119 (283)
+|.||.|.|...
T Consensus 196 a~~vV~ADG~~S 207 (570)
T 3fmw_A 196 ARYGVGCDGGRS 207 (570)
T ss_dssp ESEEEECSCSSC
T ss_pred eCEEEEcCCCCc
Confidence 999999999876
No 213
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.26 E-value=4.7e-06 Score=77.20 Aligned_cols=93 Identities=20% Similarity=0.230 Sum_probs=67.2
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC---------CCC---------------------
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN---------EIL--------------------- 63 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~---------~~l--------------------- 63 (283)
...|+|||||+.|+.+|..|++.+ .+|+|||+. .+.
T Consensus 6 ~~DvvVIG~G~aGl~aA~~la~~G--------------~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~ 71 (488)
T 3dgz_A 6 SFDLLVIGGGSGGLACAKEAAQLG--------------KKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLG 71 (488)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHH
Confidence 358999999999999999999887 899999952 010
Q ss_pred ----------------CCCC-H-----------HHHHHHHHHHHhCCCEEEeCceEEEeCCeEEE--cCC--cEEEeeEE
Q 023375 64 ----------------SSFD-D-----------RLRHYATTQLSKSGVRLVRGIVKDVDSQKLIL--NDG--TEVPYGLL 111 (283)
Q Consensus 64 ----------------~~~~-~-----------~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~--~~g--~~i~~d~v 111 (283)
+.++ + .+.......+++.+|+++.+.+..++++.+.+ .+| .++.+|.+
T Consensus 72 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~l 151 (488)
T 3dgz_A 72 GMIRDAHHYGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHI 151 (488)
T ss_dssp HHHHHHHHTTCCCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEEEEECTTSCEEEEEEEEE
T ss_pred HHHHHHHhcCcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCceEEEECCEE
Confidence 0111 0 11122334567789999988777777776554 455 47999999
Q ss_pred EEcCCCCCc
Q 023375 112 VWSTGVGPS 120 (283)
Q Consensus 112 i~a~G~~~~ 120 (283)
|+|||.+|.
T Consensus 152 ViATGs~p~ 160 (488)
T 3dgz_A 152 VIATGGRPR 160 (488)
T ss_dssp EECCCEEEC
T ss_pred EEcCCCCCC
Confidence 999998876
No 214
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.24 E-value=4.3e-06 Score=75.28 Aligned_cols=93 Identities=16% Similarity=0.249 Sum_probs=64.5
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCC-------C-C---HHH-----------
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-------F-D---DRL----------- 70 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~-------~-~---~~~----------- 70 (283)
..+|+|||||++|+.+|..|++.+ .+|+|+|+. ..... + + ...
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G--------------~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~ 91 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNG--------------IDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYY 91 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTT--------------CEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC--------------CCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHH
Confidence 358999999999999999999877 899999985 32110 0 0 000
Q ss_pred -----------------------------------HHHHHHHHHhC--CCEEEeC-ceEEEeCC----eEEEcCCcEEEe
Q 023375 71 -----------------------------------RHYATTQLSKS--GVRLVRG-IVKDVDSQ----KLILNDGTEVPY 108 (283)
Q Consensus 71 -----------------------------------~~~~~~~l~~~--gV~v~~~-~V~~v~~~----~v~~~~g~~i~~ 108 (283)
+..+.+.|.+. +++++.+ +|++++.+ .|++++|+++.+
T Consensus 92 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a 171 (398)
T 2xdo_A 92 DLALPMGVNIADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETA 171 (398)
T ss_dssp HHCBCCCEEEECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEE
T ss_pred HhhcccceEEECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEec
Confidence 00112222221 3577888 88888643 466788888999
Q ss_pred eEEEEcCCCCCc
Q 023375 109 GLLVWSTGVGPS 120 (283)
Q Consensus 109 d~vi~a~G~~~~ 120 (283)
|.||.|.|..+.
T Consensus 172 d~vV~AdG~~S~ 183 (398)
T 2xdo_A 172 DLVILANGGMSK 183 (398)
T ss_dssp SEEEECSCTTCS
T ss_pred CEEEECCCcchh
Confidence 999999998765
No 215
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.22 E-value=6.3e-07 Score=86.70 Aligned_cols=86 Identities=24% Similarity=0.306 Sum_probs=66.9
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCC---------CCC--CHHHHHHHHHHHHh
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL---------SSF--DDRLRHYATTQLSK 80 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l---------~~~--~~~~~~~~~~~l~~ 80 (283)
..++|+|||||++|+++|..|++.+ .+|+|||++ .+. |.. ...+..+..+.+.+
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G--------------~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~ 455 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRG--------------YDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAE 455 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHT--------------CEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHT
T ss_pred ccceEEEECCCHHHHHHHHHHHHCC--------------CeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHH
Confidence 4579999999999999999999887 899999996 331 221 24566777888888
Q ss_pred C-CCEEEeC-ceEEEeCCeEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 81 S-GVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 81 ~-gV~v~~~-~V~~v~~~~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
. ||+++.+ .++ ..+++++.+|.+|+|+|..|.
T Consensus 456 ~~gv~~~~~~~v~--------~~~~~~~~~d~lvlAtG~~~~ 489 (690)
T 3k30_A 456 LPNVEIYRESPMT--------GDDIVEFGFEHVITATGATWR 489 (690)
T ss_dssp CTTEEEESSCCCC--------HHHHHHTTCCEEEECCCEEEC
T ss_pred cCCCEEEECCeec--------HHHHhhcCCCEEEEcCCCccc
Confidence 7 9999988 432 234456789999999999854
No 216
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.22 E-value=9e-06 Score=75.19 Aligned_cols=94 Identities=21% Similarity=0.293 Sum_probs=67.0
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC---C-------C--------------------
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN---E-------I-------------------- 62 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~---~-------~-------------------- 62 (283)
...+|+|||||+.|+.+|..|++.+ .+|+|||+. . +
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G--------------~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~ 73 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNG--------------ARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASL 73 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC--------------CEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHH
Confidence 3468999999999999999999887 899999831 0 0
Q ss_pred ------------C-----CCCC-HHH-----------HHHHHHHHHhCCCEEEeCceEEEeCCeEEE--cCCc-EEEeeE
Q 023375 63 ------------L-----SSFD-DRL-----------RHYATTQLSKSGVRLVRGIVKDVDSQKLIL--NDGT-EVPYGL 110 (283)
Q Consensus 63 ------------l-----~~~~-~~~-----------~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~--~~g~-~i~~d~ 110 (283)
+ +.++ +.+ .......+++.+|+++.+...-++++.+.+ .+|+ ++.+|.
T Consensus 74 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~~~~~~d~ 153 (483)
T 3dgh_A 74 LGEAVHEAAAYGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQT 153 (483)
T ss_dssp HHHHHHHHHHTTBCCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEE
T ss_pred HHHHHHHHHhcCcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEEEEEeCCCeEEEEcCE
Confidence 0 0111 111 112234467789999988766677776554 4554 799999
Q ss_pred EEEcCCCCCc
Q 023375 111 LVWSTGVGPS 120 (283)
Q Consensus 111 vi~a~G~~~~ 120 (283)
+|+|||.+|.
T Consensus 154 lviATGs~p~ 163 (483)
T 3dgh_A 154 FVIAVGGRPR 163 (483)
T ss_dssp EEECCCEEEC
T ss_pred EEEeCCCCcC
Confidence 9999998876
No 217
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.21 E-value=4.5e-06 Score=77.52 Aligned_cols=92 Identities=20% Similarity=0.275 Sum_probs=65.2
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCC---------------------------C--
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS---------------------------S-- 65 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~---------------------------~-- 65 (283)
.+|+|||||+.|+.+|..|++.+ .+|+|||++.+.. .
T Consensus 9 ~DvvVIGgG~aGl~aA~~la~~G--------------~~V~liE~~~~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g 74 (492)
T 3ic9_A 9 VDVAIIGTGTAGMGAYRAAKKHT--------------DKVVLIEGGAYGTTCARVGCMPSKLLIAAADASYHASQTDLFG 74 (492)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTC--------------SCEEEEESSCSSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGT
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CcEEEEeCCCCCCcccccChhcCHHHHHHHHHHHHHhhhhhcC
Confidence 58999999999999999999877 8999999865211 0
Q ss_pred -------CC-HHHHHHHH-----------HHHHhC-CCEEEeCceEEEeCCeEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 66 -------FD-DRLRHYAT-----------TQLSKS-GVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 66 -------~~-~~~~~~~~-----------~~l~~~-gV~v~~~~V~~v~~~~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
++ +.+.++.. ..+... +++++.+...-+++..|.+++++++.+|.+|+|||.+|.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~~~v~~~~~~~~~~d~lViATGs~p~ 149 (492)
T 3ic9_A 75 IQVDRISVNGKAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDEHTLQVDDHSQVIAKRIVIATGSRPN 149 (492)
T ss_dssp EECSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEETTEEEETTTEEEEEEEEEECCCEECC
T ss_pred cCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecCCEEEEcCCcEEEeCEEEEccCCCCc
Confidence 11 12222221 112222 455666654445677888888899999999999999887
No 218
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.21 E-value=7.9e-06 Score=73.17 Aligned_cols=92 Identities=20% Similarity=0.248 Sum_probs=63.9
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCC---C----CCHHHH---------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS---S----FDDRLR--------------- 71 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~---~----~~~~~~--------------- 71 (283)
++|+|||||++|+-+|..|++.+ .+|+|+|+. .+-. . +.+...
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G--------------~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~ 67 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHG--------------IKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAF 67 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCC--------------CCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHh
Confidence 68999999999999999999987 899999875 2211 0 111111
Q ss_pred --------------------------------------------HHHHHHHH-hCCCEEEeC-ceEEEeC--C---eEEE
Q 023375 72 --------------------------------------------HYATTQLS-KSGVRLVRG-IVKDVDS--Q---KLIL 100 (283)
Q Consensus 72 --------------------------------------------~~~~~~l~-~~gV~v~~~-~V~~v~~--~---~v~~ 100 (283)
..+.+.|. ..+..++.+ ++++++. + .|++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~ 147 (412)
T 4hb9_A 68 EEASRYIGGQSRFYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGGIKIFF 147 (412)
T ss_dssp HHHCEEECCCCEEECTTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEE
T ss_pred hhhhcccCcceeEecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEE
Confidence 11222222 234457777 7777753 2 4778
Q ss_pred cCCcEEEeeEEEEcCCCCCc
Q 023375 101 NDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 101 ~~g~~i~~d~vi~a~G~~~~ 120 (283)
+||+++.+|.||-|-|....
T Consensus 148 ~dG~~~~adlvVgADG~~S~ 167 (412)
T 4hb9_A 148 ADGSHENVDVLVGADGSNSK 167 (412)
T ss_dssp TTSCEEEESEEEECCCTTCH
T ss_pred CCCCEEEeeEEEECCCCCcc
Confidence 89999999999999998654
No 219
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.21 E-value=1.6e-05 Score=73.86 Aligned_cols=95 Identities=19% Similarity=0.260 Sum_probs=70.2
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCC--------------------------
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-------------------------- 64 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~-------------------------- 64 (283)
....+|+|||||++|+.+|..|++.+ .+|+|||+. ...+
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G--------------~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~ 75 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGG--------------VDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGP 75 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHh
Confidence 34568999999999999999999877 677777653 1100
Q ss_pred ---------------------CC-------CHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC----eEEEcCCc---EEEe
Q 023375 65 ---------------------SF-------DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGT---EVPY 108 (283)
Q Consensus 65 ---------------------~~-------~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~----~v~~~~g~---~i~~ 108 (283)
.. ...+...+.+.+.+.|++++.+ +|++++.+ .|++.+++ ++.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a 155 (499)
T 2qa2_A 76 VETSTQGHFGGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTT 155 (499)
T ss_dssp CCEESEEEETTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEE
T ss_pred ccccccceecceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEe
Confidence 00 1345666677777889999999 89988643 35566664 7999
Q ss_pred eEEEEcCCCCCc
Q 023375 109 GLLVWSTGVGPS 120 (283)
Q Consensus 109 d~vi~a~G~~~~ 120 (283)
|.||-|.|....
T Consensus 156 ~~vVgADG~~S~ 167 (499)
T 2qa2_A 156 RYVVGCDGGRST 167 (499)
T ss_dssp EEEEECCCTTCH
T ss_pred CEEEEccCcccH
Confidence 999999998764
No 220
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.19 E-value=2.6e-06 Score=78.11 Aligned_cols=92 Identities=16% Similarity=0.149 Sum_probs=68.4
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCC-C----C------------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL-S----S------------------------ 65 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l-~----~------------------------ 65 (283)
.+|+|||||++|+.+|..|++.+ .+|+|+|+.... . .
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G--------------~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~ 72 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRG--------------LKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELEN 72 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSS--------------CCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHh
Confidence 58999999999999999999876 777777764210 0 0
Q ss_pred ------------------------C-CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--Ce---EEEc---CCc--EEEee
Q 023375 66 ------------------------F-DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK---LILN---DGT--EVPYG 109 (283)
Q Consensus 66 ------------------------~-~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~~---v~~~---~g~--~i~~d 109 (283)
+ ...+.+.+.+.+.+.|++++.+ +|+++.. +. |++. +|+ ++.+|
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad 152 (453)
T 3atr_A 73 KINGIKLYSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSK 152 (453)
T ss_dssp EEEEEEEECTTSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECS
T ss_pred hhcceEEECCCCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcC
Confidence 0 1245566677777889999999 8888753 33 4454 676 79999
Q ss_pred EEEEcCCCCCc
Q 023375 110 LLVWSTGVGPS 120 (283)
Q Consensus 110 ~vi~a~G~~~~ 120 (283)
.||.|+|..+.
T Consensus 153 ~VV~AdG~~s~ 163 (453)
T 3atr_A 153 VVVEATGYSRS 163 (453)
T ss_dssp EEEECCGGGCT
T ss_pred EEEECcCCchh
Confidence 99999998654
No 221
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.19 E-value=1.4e-05 Score=71.57 Aligned_cols=55 Identities=18% Similarity=0.200 Sum_probs=38.7
Q ss_pred HHHHHHHHhCCCEEEeC-ceEEEeC--CeE--EEcCCcEEEeeEEEEcCCCCCchhhhccC
Q 023375 72 HYATTQLSKSGVRLVRG-IVKDVDS--QKL--ILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127 (283)
Q Consensus 72 ~~~~~~l~~~gV~v~~~-~V~~v~~--~~v--~~~~g~~i~~d~vi~a~G~~~~~~~~~~~ 127 (283)
..+.+.+++.|++++.+ +|+++.. +.+ .+.+ .++.+|.||+|+|.....+...++
T Consensus 157 ~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~-g~i~a~~VV~A~G~~s~~l~~~~g 216 (397)
T 2oln_A 157 AALFTLAQAAGATLRAGETVTELVPDADGVSVTTDR-GTYRAGKVVLACGPYTNDLLEPLG 216 (397)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESS-CEEEEEEEEECCGGGHHHHHGGGT
T ss_pred HHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECC-CEEEcCEEEEcCCcChHHHhhhcC
Confidence 34455566789999998 8988853 333 3344 479999999999987555555544
No 222
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.18 E-value=5.1e-06 Score=75.03 Aligned_cols=58 Identities=19% Similarity=0.316 Sum_probs=40.4
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceE---------EEeCC--e--EEEcCCcEEEeeEEEEcCCCCCchhhh-ccCC
Q 023375 70 LRHYATTQLSKSGVRLVRG-IVK---------DVDSQ--K--LILNDGTEVPYGLLVWSTGVGPSTLVK-SLDL 128 (283)
Q Consensus 70 ~~~~~~~~l~~~gV~v~~~-~V~---------~v~~~--~--v~~~~g~~i~~d~vi~a~G~~~~~~~~-~~~l 128 (283)
+...+.+.+++.|++++.+ +|+ ++..+ . |.+.+| ++.+|.||.|+|.....+.. .+++
T Consensus 174 l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~g~ 246 (405)
T 3c4n_A 174 LALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAGPALVEQGLGL 246 (405)
T ss_dssp HHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccHHHHHHHhcCC
Confidence 4455666677889999998 788 77543 2 444444 79999999999987655555 4443
No 223
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.18 E-value=1.5e-05 Score=74.67 Aligned_cols=49 Identities=20% Similarity=0.277 Sum_probs=37.8
Q ss_pred HHHHHHHHhCCCEEEeCceEEEeC--C----eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 72 HYATTQLSKSGVRLVRGIVKDVDS--Q----KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 72 ~~~~~~l~~~gV~v~~~~V~~v~~--~----~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
..+.+.+++.||+++.++|+++.. + .|++.+|+++.+|.||.|+|..+.
T Consensus 169 ~~L~~~a~~~gv~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 169 DFLKRWAVERGVNRVVDEVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHHHHHHHTTCEEEECCEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHHHHHHHCCCEEEEeeEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 344455567899999888888753 2 466778888999999999998765
No 224
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.18 E-value=1.3e-05 Score=74.73 Aligned_cols=92 Identities=20% Similarity=0.259 Sum_probs=67.8
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCC---------C---------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---------S--------------------- 64 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l---------~--------------------- 64 (283)
.+|+|||||++|+.+|..|++.+ .+|+|||+..+. |
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G--------------~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~ 73 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRG--------------HRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGF 73 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT--------------CCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTC
T ss_pred CCEEEECcCHHHHHHHHHHHhCC--------------CCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCC
Confidence 58999999999999999999876 677777764210 0
Q ss_pred ---------------------------------CC-CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--C---eEEE--cC
Q 023375 65 ---------------------------------SF-DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q---KLIL--ND 102 (283)
Q Consensus 65 ---------------------------------~~-~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~---~v~~--~~ 102 (283)
.+ ...+.+.+.+.+++.||+++.+ +|+++.. + +|++ .+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~d 153 (512)
T 3e1t_A 74 PIKRGGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTE 153 (512)
T ss_dssp CEECEEEEECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSS
T ss_pred ccccCceEEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCC
Confidence 00 1244556667777899999999 8888754 3 2444 35
Q ss_pred Cc--EEEeeEEEEcCCCCCc
Q 023375 103 GT--EVPYGLLVWSTGVGPS 120 (283)
Q Consensus 103 g~--~i~~d~vi~a~G~~~~ 120 (283)
|+ ++.+|.||.|+|....
T Consensus 154 G~~~~i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 154 GVELMAHARFIVDASGNRTR 173 (512)
T ss_dssp SCEEEEEEEEEEECCCTTCS
T ss_pred CCEEEEEcCEEEECCCcchH
Confidence 64 7999999999998764
No 225
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.17 E-value=2.5e-06 Score=82.26 Aligned_cols=83 Identities=24% Similarity=0.357 Sum_probs=63.1
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCC---------CCCC--HHHHHHHHHHHHh
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL---------SSFD--DRLRHYATTQLSK 80 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l---------~~~~--~~~~~~~~~~l~~ 80 (283)
..++|+|||||++|+++|..|++.+ .+|+|||+. .+. |... .+...+..+.+++
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g--------------~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARG--------------HQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEV 437 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTT--------------CEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999999999999999876 899999986 331 2111 2344566777888
Q ss_pred CCCEEEeC-ceEEEeCCeEEEcCCcEE-EeeEEEEcCCCCCc
Q 023375 81 SGVRLVRG-IVKDVDSQKLILNDGTEV-PYGLLVWSTGVGPS 120 (283)
Q Consensus 81 ~gV~v~~~-~V~~v~~~~v~~~~g~~i-~~d~vi~a~G~~~~ 120 (283)
.||+++++ .|+. ..+ .+|.||+|||.+|.
T Consensus 438 ~gv~~~~~~~v~~-----------~~~~~~d~lviAtG~~p~ 468 (671)
T 1ps9_A 438 TGVTLKLNHTVTA-----------DQLQAFDETILASGIVPR 468 (671)
T ss_dssp HTCEEEESCCCCS-----------SSSCCSSEEEECCCEEEC
T ss_pred cCCEEEeCcEecH-----------HHhhcCCEEEEccCCCcC
Confidence 99999998 4432 123 79999999999876
No 226
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.16 E-value=1.5e-05 Score=74.20 Aligned_cols=95 Identities=21% Similarity=0.232 Sum_probs=69.7
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCC--------------------------
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-------------------------- 64 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~-------------------------- 64 (283)
....+|+|||||++|+.+|..|++.+ .+|+|||+. ....
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G--------------~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~ 74 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAG--------------VEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGE 74 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCS
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHh
Confidence 34568999999999999999999877 677777753 1100
Q ss_pred ---------------------C------C-CHHHHHHHHHHHHhCCCEEEeC-ceEEEeC--Ce--EEEcCCc---EEEe
Q 023375 65 ---------------------S------F-DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK--LILNDGT---EVPY 108 (283)
Q Consensus 65 ---------------------~------~-~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~~--v~~~~g~---~i~~ 108 (283)
. + ...+.+.+.+.+++.|++++.+ +|++++. +. |++++++ ++.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a 154 (500)
T 2qa1_A 75 VETSTQGHFGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRA 154 (500)
T ss_dssp CCBCCEEEETTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred ccccccccccceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEe
Confidence 0 0 1245566667777889999999 8988853 43 4555654 7999
Q ss_pred eEEEEcCCCCCc
Q 023375 109 GLLVWSTGVGPS 120 (283)
Q Consensus 109 d~vi~a~G~~~~ 120 (283)
|.||-|.|....
T Consensus 155 ~~vVgADG~~S~ 166 (500)
T 2qa1_A 155 AYLVGCDGGRSS 166 (500)
T ss_dssp SEEEECCCTTCH
T ss_pred CEEEECCCcchH
Confidence 999999998764
No 227
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.16 E-value=1.1e-05 Score=75.68 Aligned_cols=51 Identities=20% Similarity=0.169 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEe--CC----e--EEEcCC---cEEEeeEEEEcCCCCC
Q 023375 69 RLRHYATTQLSKSGVRLVRG-IVKDVD--SQ----K--LILNDG---TEVPYGLLVWSTGVGP 119 (283)
Q Consensus 69 ~~~~~~~~~l~~~gV~v~~~-~V~~v~--~~----~--v~~~~g---~~i~~d~vi~a~G~~~ 119 (283)
.+...+.+.+++.|++++.+ +|++++ ++ + +++.++ +++.+|.||.|.|...
T Consensus 121 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 121 KLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 45566777778889999999 888885 33 3 445555 6899999999999876
No 228
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.15 E-value=1.1e-05 Score=76.42 Aligned_cols=51 Identities=10% Similarity=0.022 Sum_probs=37.9
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceEEEe-C--C---eEEEc--CCc--EEEeeEEEEcCCCCCc
Q 023375 70 LRHYATTQLSKSGVRLVRG-IVKDVD-S--Q---KLILN--DGT--EVPYGLLVWSTGVGPS 120 (283)
Q Consensus 70 ~~~~~~~~l~~~gV~v~~~-~V~~v~-~--~---~v~~~--~g~--~i~~d~vi~a~G~~~~ 120 (283)
+...+.+.+++.||+++++ +|+++. . + +|++. +|+ ++.+|.||+|+|..+.
T Consensus 257 l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 257 VAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp HHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 4455566677889999999 898884 2 2 35554 564 6899999999998764
No 229
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.15 E-value=1.4e-05 Score=75.88 Aligned_cols=52 Identities=19% Similarity=0.293 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEeC--C----eEEEc------CC---------cEEEeeEEEEcCCCCCc
Q 023375 69 RLRHYATTQLSKSGVRLVRG-IVKDVDS--Q----KLILN------DG---------TEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 69 ~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~----~v~~~------~g---------~~i~~d~vi~a~G~~~~ 120 (283)
.+.+.+.+.+++.||+++.+ +|+++.. + +|.+. +| .++.+|.||.|.|..+.
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 45666777788889999999 8988752 2 25554 33 68999999999999875
No 230
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.14 E-value=1.5e-05 Score=77.06 Aligned_cols=56 Identities=11% Similarity=0.135 Sum_probs=39.9
Q ss_pred HHHHHHhCCCEEEeC-ceEEEeCC----eEEEcCCc-EEEeeEEEEcCCCCCchhhhccCCC
Q 023375 74 ATTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGT-EVPYGLLVWSTGVGPSTLVKSLDLP 129 (283)
Q Consensus 74 ~~~~l~~~gV~v~~~-~V~~v~~~----~v~~~~g~-~i~~d~vi~a~G~~~~~~~~~~~l~ 129 (283)
+.+.+++.|++++.+ +|+++..+ .|.+.+|+ ++.+|.||+|+|.....+....+++
T Consensus 418 L~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~~l~~~~~lp 479 (689)
T 3pvc_A 418 LMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLPEWEQTHHLP 479 (689)
T ss_dssp HHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTTCSTTTTTSC
T ss_pred HHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchhccccccCCc
Confidence 344456789999999 89988643 35666776 8999999999998766554444443
No 231
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.11 E-value=5.4e-06 Score=73.62 Aligned_cols=56 Identities=7% Similarity=0.054 Sum_probs=40.0
Q ss_pred HHHHHHHHHhCCCEEEeC-ceEEEeC--C--eEEEcCCcEEEeeEEEEcCCCCCchhhhccC
Q 023375 71 RHYATTQLSKSGVRLVRG-IVKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127 (283)
Q Consensus 71 ~~~~~~~l~~~gV~v~~~-~V~~v~~--~--~v~~~~g~~i~~d~vi~a~G~~~~~~~~~~~ 127 (283)
...+.+.+++.|++++.+ +|+++.. + .|++.+| ++.+|.||+|+|.....+...++
T Consensus 157 ~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g 217 (381)
T 3nyc_A 157 HQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAG 217 (381)
T ss_dssp HHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHHT
T ss_pred HHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHhC
Confidence 344556667889999998 8888853 3 3555555 89999999999987655554443
No 232
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.06 E-value=2.2e-05 Score=70.89 Aligned_cols=92 Identities=23% Similarity=0.321 Sum_probs=65.8
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccE-EEEEeCC-CCCCC-----CC--------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH-VTLIEAN-EILSS-----FD-------------------- 67 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~-V~li~~~-~~l~~-----~~-------------------- 67 (283)
.+|+|||||++|+.+|..|++.+ .+ |+|+|+. .+.+. +.
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G--------------~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~ 70 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAG--------------IGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATA 70 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHS
T ss_pred CeEEEECCCHHHHHHHHHHHhCC--------------CCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhC
Confidence 58999999999999999999877 77 8888875 22100 00
Q ss_pred ------------------------------------HHHHHHHHHHHHh-CC-CEEEeC-ceEEEeC-C--eEEEcC---
Q 023375 68 ------------------------------------DRLRHYATTQLSK-SG-VRLVRG-IVKDVDS-Q--KLILND--- 102 (283)
Q Consensus 68 ------------------------------------~~~~~~~~~~l~~-~g-V~v~~~-~V~~v~~-~--~v~~~~--- 102 (283)
..+.+.+.+.+.+ .| ++++.+ +|++++. + .|++.+
T Consensus 71 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~~~~v~v~~~~~~~ 150 (410)
T 3c96_A 71 IPTHELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEERDGRVLIGARDGH 150 (410)
T ss_dssp EEECEEEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEEETTEEEEEEEETT
T ss_pred CCcceEEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEecCCccEEEEecCCC
Confidence 1344455555655 35 689988 7887753 3 355554
Q ss_pred C--cEEEeeEEEEcCCCCCc
Q 023375 103 G--TEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 103 g--~~i~~d~vi~a~G~~~~ 120 (283)
| +++.+|.||.|.|..+.
T Consensus 151 g~~~~~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 151 GKPQALGADVLVGADGIHSA 170 (410)
T ss_dssp SCEEEEEESEEEECCCTTCH
T ss_pred CCceEEecCEEEECCCccch
Confidence 7 57999999999998765
No 233
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.06 E-value=9.4e-06 Score=81.36 Aligned_cols=93 Identities=19% Similarity=0.165 Sum_probs=67.3
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCC---CC-----C----CHHHHHHHHHHHHh
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL---SS-----F----DDRLRHYATTQLSK 80 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l---~~-----~----~~~~~~~~~~~l~~ 80 (283)
..+|+|||||++|+.+|..|++.+ .+|+|||+. .+. .. + ..+......+.+.+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G--------------~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~ 193 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSG--------------ARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAE 193 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC--------------CcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhh
Confidence 468999999999999999999876 899999986 331 01 1 12344455566666
Q ss_pred C-CCEEEeC-ceEEEeCCe-E----------EE--------cCCcEEEeeEEEEcCCCCCc
Q 023375 81 S-GVRLVRG-IVKDVDSQK-L----------IL--------NDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 81 ~-gV~v~~~-~V~~v~~~~-v----------~~--------~~g~~i~~d~vi~a~G~~~~ 120 (283)
. +|+++.+ +|.++..+. + .+ .++.++.+|.||+|||..|.
T Consensus 194 ~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~ 254 (965)
T 2gag_A 194 AEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHER 254 (965)
T ss_dssp STTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEEC
T ss_pred cCCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccC
Confidence 5 9999998 788876542 1 11 11236899999999999775
No 234
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.06 E-value=1.7e-05 Score=78.31 Aligned_cols=57 Identities=14% Similarity=0.238 Sum_probs=41.0
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceEEEeC--Ce---EEEcCCcEEEeeEEEEcCCCCCchhhhccC
Q 023375 70 LRHYATTQLSKSGVRLVRG-IVKDVDS--QK---LILNDGTEVPYGLLVWSTGVGPSTLVKSLD 127 (283)
Q Consensus 70 ~~~~~~~~l~~~gV~v~~~-~V~~v~~--~~---v~~~~g~~i~~d~vi~a~G~~~~~~~~~~~ 127 (283)
+...+.+.+++.|++++.+ +|+++.. +. |.+.+| ++.+|.||+|+|.....+...++
T Consensus 153 l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l~~~~g 215 (830)
T 1pj5_A 153 AVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKIGAMIG 215 (830)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHHHHTTT
T ss_pred HHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHHHHHHhC
Confidence 3444556667889999998 8988863 33 455566 79999999999987655544443
No 235
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.05 E-value=1.3e-06 Score=85.15 Aligned_cols=87 Identities=21% Similarity=0.228 Sum_probs=59.2
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCC---------CCCC--HHHHHHHHHHHHh
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EIL---------SSFD--DRLRHYATTQLSK 80 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l---------~~~~--~~~~~~~~~~l~~ 80 (283)
..++|+|||||++|+++|..|++.+ .+|+|||+. .+. |... ..+.++..+.++.
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G--------------~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~ 453 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESG--------------YTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITK 453 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCC--------------CeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHH
Confidence 3478999999999999999999887 899999986 432 1111 2333444444433
Q ss_pred C------CCEEEeCceEEEeCCeEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 81 S------GVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 81 ~------gV~v~~~~V~~v~~~~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
. +|++..++ .++++++.++.+|.||+|||..|.
T Consensus 454 ~~~~~~~~v~i~~~~-------~v~~~~~~~~~~d~vviAtG~~~~ 492 (729)
T 1o94_A 454 LLKKNKESQLALGQK-------PMTADDVLQYGADKVIIATGARWN 492 (729)
T ss_dssp HHHHSTTCEEECSCC-------CCCHHHHHTSCCSEEEECCCEEEC
T ss_pred hhcccCCceEEEeCe-------EEehhhccccCCCEEEEcCCCCcc
Confidence 2 55655441 233344556889999999999853
No 236
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.98 E-value=5.7e-06 Score=74.04 Aligned_cols=85 Identities=21% Similarity=0.381 Sum_probs=64.1
Q ss_pred CeEEEEccCcHHHHHHHHHHHh--hhhHHHhhcCCCCCccEEEEEeCC-CC----------------------C-CC---
Q 023375 15 LHCVVVGGGPTGVEFSGELSDF--IMRDVRQRYSHVKDYIHVTLIEAN-EI----------------------L-SS--- 65 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~--~~~~~~~~~~~~~~~~~V~li~~~-~~----------------------l-~~--- 65 (283)
++|+|||||++|+.+|..|++. + .+|+|+|+. .+ . ..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G--------------~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPL--------------WAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPER 66 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTT--------------SEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGG
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCC--------------CCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHH
Confidence 4799999999999999999987 5 788888875 22 0 00
Q ss_pred -----------------------------CCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCCeEEEcCCcEEEeeEEEEcC
Q 023375 66 -----------------------------FDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWST 115 (283)
Q Consensus 66 -----------------------------~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~~v~~~~g~~i~~d~vi~a~ 115 (283)
....+.+.+.+.+++.|++++.+ +|++++.. +++.+|.||.|.
T Consensus 67 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-------~~~~ad~vV~Ad 139 (381)
T 3c4a_A 67 LNPQFLEDFKLVHHNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-------PLADYDLVVLAN 139 (381)
T ss_dssp GCCEEECCEEEEESSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-------CGGGCSEEEECC
T ss_pred HhhccccceEEEeCCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-------ccccCCEEEECC
Confidence 01356677777788889999998 78877643 135799999999
Q ss_pred CCCCc
Q 023375 116 GVGPS 120 (283)
Q Consensus 116 G~~~~ 120 (283)
|..+.
T Consensus 140 G~~S~ 144 (381)
T 3c4a_A 140 GVNHK 144 (381)
T ss_dssp GGGGG
T ss_pred CCCch
Confidence 97653
No 237
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.98 E-value=3.8e-06 Score=77.99 Aligned_cols=91 Identities=21% Similarity=0.350 Sum_probs=63.1
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCC----------CC---CHHHHHHHHHHHH
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS----------SF---DDRLRHYATTQLS 79 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~----------~~---~~~~~~~~~~~l~ 79 (283)
..+|+|||||++|+.+|.+|++. .+|+|||++ .+.. .+ ..++...+.+.+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~---------------~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l- 171 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY---------------LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL- 171 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT---------------CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-
T ss_pred cCCEEEECccHHHHHHHHHHHhc---------------CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-
Confidence 35899999999999999999853 589999986 3310 11 122333333334
Q ss_pred hCCCEEEeC-ceEEEeCC--eEEE---cCCc--EEEeeEEEEcCCCCCc
Q 023375 80 KSGVRLVRG-IVKDVDSQ--KLIL---NDGT--EVPYGLLVWSTGVGPS 120 (283)
Q Consensus 80 ~~gV~v~~~-~V~~v~~~--~v~~---~~g~--~i~~d~vi~a~G~~~~ 120 (283)
+.|++++.+ .|.+++.+ .+.. ++++ ++.+|.+|+|+|..|.
T Consensus 172 ~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~ 220 (493)
T 1y56_A 172 NENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDS 220 (493)
T ss_dssp CTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEEC
T ss_pred hcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCcc
Confidence 569999988 78777543 2222 4454 6899999999998776
No 238
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.93 E-value=6.3e-05 Score=68.30 Aligned_cols=55 Identities=16% Similarity=0.196 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHhCCCEEEeC----ceEEEe--CCe---EEEcCCcEEEeeEEEEcCCCCCchhh
Q 023375 69 RLRHYATTQLSKSGVRLVRG----IVKDVD--SQK---LILNDGTEVPYGLLVWSTGVGPSTLV 123 (283)
Q Consensus 69 ~~~~~~~~~l~~~gV~v~~~----~V~~v~--~~~---v~~~~g~~i~~d~vi~a~G~~~~~~~ 123 (283)
.+...+.+.+++.|++++++ +|+++. ++. |++.+|+++.+|.||+|+|.....+.
T Consensus 162 ~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~l~ 225 (438)
T 3dje_A 162 NALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAGQFL 225 (438)
T ss_dssp HHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGGGTS
T ss_pred HHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChhhhc
Confidence 45555666677889999987 588885 332 77788889999999999998765444
No 239
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.92 E-value=9.6e-05 Score=69.46 Aligned_cols=51 Identities=20% Similarity=0.235 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhC-CCEEEeCceEEEeC--C----eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 70 LRHYATTQLSKS-GVRLVRGIVKDVDS--Q----KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 70 ~~~~~~~~l~~~-gV~v~~~~V~~v~~--~----~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
+.+.+.+.+++. ||+++.++|+++.. + .|++++|+++.+|.||.|+|..+.
T Consensus 196 l~~~L~~~~~~~~Gv~i~~~~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 196 VADFLRRFATEKLGVRHVEDRVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHHHHHHHHSCCEEEECCEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHhcCCcEEEECeEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 445555666677 99999888888853 2 366778888999999999998665
No 240
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.89 E-value=5.6e-05 Score=70.23 Aligned_cols=55 Identities=13% Similarity=0.039 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceEEEeC--C--eEEEc---CCc--EEEeeEEEEcCCCCCchhhh
Q 023375 70 LRHYATTQLSKSGVRLVRG-IVKDVDS--Q--KLILN---DGT--EVPYGLLVWSTGVGPSTLVK 124 (283)
Q Consensus 70 ~~~~~~~~l~~~gV~v~~~-~V~~v~~--~--~v~~~---~g~--~i~~d~vi~a~G~~~~~~~~ 124 (283)
+...+.+.+.+.|++++.+ +|+++.. + .|++. +|+ ++.+|.||.|+|.....+..
T Consensus 151 l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~ 215 (501)
T 2qcu_A 151 LVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFD 215 (501)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHH
Confidence 4455566677889999998 8988854 2 46663 565 78999999999987665544
No 241
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.88 E-value=0.00012 Score=68.42 Aligned_cols=49 Identities=24% Similarity=0.313 Sum_probs=36.9
Q ss_pred HHHHHHHHh-CCCEEEeCceEEEeC--C----eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 72 HYATTQLSK-SGVRLVRGIVKDVDS--Q----KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 72 ~~~~~~l~~-~gV~v~~~~V~~v~~--~----~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
..+.+.+++ .||+++.++|++++. + .|++++|+++.+|.||.|+|..+.
T Consensus 179 ~~L~~~a~~~~Gv~i~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 179 QLLTEHCTQKLGVTHIRDHVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHHHTSCCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHHHHHHHhcCCCEEEEeEEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 334455566 799999888888853 2 356678778999999999998664
No 242
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.87 E-value=8.8e-05 Score=69.60 Aligned_cols=91 Identities=25% Similarity=0.381 Sum_probs=64.4
Q ss_pred eEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCC--------CCC----------------------
Q 023375 16 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI--------LSS---------------------- 65 (283)
Q Consensus 16 ~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~--------l~~---------------------- 65 (283)
.++|||||+.|..+|..+++++ .+|.|||..+. +..
T Consensus 44 DviVIG~GpaG~~aA~~aa~~G--------------~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~ 109 (542)
T 4b1b_A 44 DYVVIGGGPGGMASAKEAAAHG--------------ARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSI 109 (542)
T ss_dssp EEEEECCSHHHHHHHHHHHTTT--------------CCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCC--------------CeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHH
Confidence 6999999999999999999988 89999996421 100
Q ss_pred -------C---------C-H-----------HHHHHHHHHHHhCCCEEEeCceEEEeCCeEEE--c----CCcEEEeeEE
Q 023375 66 -------F---------D-D-----------RLRHYATTQLSKSGVRLVRGIVKDVDSQKLIL--N----DGTEVPYGLL 111 (283)
Q Consensus 66 -------~---------~-~-----------~~~~~~~~~l~~~gV~v~~~~V~~v~~~~v~~--~----~g~~i~~d~v 111 (283)
+ + + .+.......|++.||+++.+.-.=+.++.|.. . +++++.++.+
T Consensus 110 ~~~~~~~~Gi~~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~i 189 (542)
T 4b1b_A 110 FKLDSKAYGWKFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYI 189 (542)
T ss_dssp HHHTGGGGTEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEE
T ss_pred HHhhhHhcCcccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeE
Confidence 0 0 0 11122334467789999887555556666544 2 3357999999
Q ss_pred EEcCCCCCc
Q 023375 112 VWSTGVGPS 120 (283)
Q Consensus 112 i~a~G~~~~ 120 (283)
|+|||.+|.
T Consensus 190 iIATGs~P~ 198 (542)
T 4b1b_A 190 LIATGCRPH 198 (542)
T ss_dssp EECCCEEEC
T ss_pred EeccCCCCC
Confidence 999999886
No 243
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=97.86 E-value=0.00015 Score=65.49 Aligned_cols=44 Identities=14% Similarity=0.276 Sum_probs=35.2
Q ss_pred HHHHhCCCEEEeC-ceEEEeCC--eEEEcCCcEEEeeEEEEcCCCCC
Q 023375 76 TQLSKSGVRLVRG-IVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGP 119 (283)
Q Consensus 76 ~~l~~~gV~v~~~-~V~~v~~~--~v~~~~g~~i~~d~vi~a~G~~~ 119 (283)
+.+++.|++++++ +|++|..+ .++..+|+++.+|.||+|+|...
T Consensus 197 ~~~~~~G~~i~~~~~V~~i~~~~~~vV~~~g~~~~ad~Vv~a~~~~~ 243 (421)
T 3nrn_A 197 RIIMENKGKILTRKEVVEINIEEKKVYTRDNEEYSFDVAISNVGVRE 243 (421)
T ss_dssp HHHHTTTCEEESSCCEEEEETTTTEEEETTCCEEECSEEEECSCHHH
T ss_pred HHHHHCCCEEEcCCeEEEEEEECCEEEEeCCcEEEeCEEEECCCHHH
Confidence 4456779999999 89999753 55456788999999999999653
No 244
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.84 E-value=0.00012 Score=68.08 Aligned_cols=51 Identities=22% Similarity=0.150 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEeCC------eEEEc-CCc--EEEee-EEEEcCCCCC
Q 023375 69 RLRHYATTQLSKSGVRLVRG-IVKDVDSQ------KLILN-DGT--EVPYG-LLVWSTGVGP 119 (283)
Q Consensus 69 ~~~~~~~~~l~~~gV~v~~~-~V~~v~~~------~v~~~-~g~--~i~~d-~vi~a~G~~~ 119 (283)
.+...+.+.+++.||+++++ +|+++..+ +|++. +++ ++.+| .||+|+|...
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 44555666677889999999 88887532 35554 343 58896 9999999876
No 245
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.84 E-value=3.5e-07 Score=84.61 Aligned_cols=141 Identities=16% Similarity=0.170 Sum_probs=83.9
Q ss_pred eEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHH--------HHHHHHHHHHhCCCEEE
Q 023375 16 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDR--------LRHYATTQLSKSGVRLV 86 (283)
Q Consensus 16 ~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~--------~~~~~~~~l~~~gV~v~ 86 (283)
+++++|+| |++++..+...+ ..+ +.+.+ ++++.+++. ....+.+.+++.|. ++
T Consensus 214 ~~~~~ggg--~~~~ae~~~~~G--------------~~~-v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~~~~~~-v~ 275 (472)
T 2e5v_A 214 TVTSLDGE--VFLLTETLRGEG--------------AQI-INENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHK-VF 275 (472)
T ss_dssp EEECGGGC--CEECCTHHHHTT--------------CEE-EETTCCCGGGGTCTTGGGSCHHHHHHHHHHHHHHTCC-EE
T ss_pred EEEccCCC--ceeeehhhcCCc--------------eEE-ECCCCCCCCccCCcccCcCchhHHHHHHHHHHHhCCc-EE
Confidence 44556766 888887776654 555 66666 777655443 25566666766664 44
Q ss_pred eC-c-eEEEeCCeEEEcCCcEEE-eeEEEEcCCCCCchhhhccCCCCCCCCccccCCCcccCCCCCEEEeccccccCcCC
Q 023375 87 RG-I-VKDVDSQKLILNDGTEVP-YGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLEST 163 (283)
Q Consensus 87 ~~-~-V~~v~~~~v~~~~g~~i~-~d~vi~a~G~~~~~~~~~~~l~~~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~ 163 (283)
++ . +.+ +. +.++ .+.++.+.|..|+..+.-.+..+...|.|.||+++|| +.|+|||+|||+... ..
T Consensus 276 ld~~~~~~-------~~--~~~~~~~~~~~~~G~dp~~~i~v~p~~~~~~GGI~vd~~~~t-~ipgLyAaGd~a~~~-~h 344 (472)
T 2e5v_A 276 IDLSKIED-------FE--RKFPVVAKYLARHGHNYKVKIPIFPAAHFVDGGIRVNIRGES-NIVNLYAIGEVSDSG-LH 344 (472)
T ss_dssp EECTTCTT-------HH--HHCHHHHHHHHHTTCCTTSCEECEEEEEEESCEEECCTTCBC-SSBTEEECGGGEECS-SS
T ss_pred EeccchHH-------HH--HHhHHHHHHHHHhCcCcccceEeehhhceeCCCeEECCCCcc-ccCCEEecchhcccc-cC
Confidence 33 2 110 10 1233 4667778898887211111111233688999999999 899999999998621 11
Q ss_pred CCcCCCcchHHHHHHHHHHHHHHHH
Q 023375 164 GKTVLPALAQVAERQGKYLFSLLNR 188 (283)
Q Consensus 164 ~~~~~p~~~~~A~~qg~~~a~~i~~ 188 (283)
|. ...+..|..+|.+.+++...
T Consensus 345 g~---~rl~~~sl~~~~v~G~~a~~ 366 (472)
T 2e5v_A 345 GA---NRLASNSLLEGLVFGINLPR 366 (472)
T ss_dssp TT---SCCTTHHHHHHHHHHHHGGG
T ss_pred CC---CCCCcccHHHHHHHHHHHHH
Confidence 11 24555666666666555443
No 246
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.84 E-value=0.00014 Score=67.55 Aligned_cols=52 Identities=23% Similarity=0.222 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHhCCCEEEeCceEEEeC--C----eEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 69 RLRHYATTQLSKSGVRLVRGIVKDVDS--Q----KLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 69 ~~~~~~~~~l~~~gV~v~~~~V~~v~~--~----~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
.+...+.+.+++.||+++.++|++++. + .|++.+|+++.+|.||.|+|....
T Consensus 174 ~l~~~L~~~a~~~gv~~~~~~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 174 EVARYLSEYAIARGVRHVVDDVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHHHHTTCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHCCCEEEECeEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 344455566667899998888888753 2 366778888999999999998654
No 247
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.81 E-value=5.7e-05 Score=71.23 Aligned_cols=59 Identities=14% Similarity=-0.001 Sum_probs=40.8
Q ss_pred HHHHHHHHHHhCCCEEEeC-ceEEEeC--C---eEEEcC---C--cEEEeeEEEEcCCCCCchhhhccCC
Q 023375 70 LRHYATTQLSKSGVRLVRG-IVKDVDS--Q---KLILND---G--TEVPYGLLVWSTGVGPSTLVKSLDL 128 (283)
Q Consensus 70 ~~~~~~~~l~~~gV~v~~~-~V~~v~~--~---~v~~~~---g--~~i~~d~vi~a~G~~~~~~~~~~~l 128 (283)
+...+.+.+.+.|++++++ +|+++.. + +|++.+ | .++.+|.||.|+|.....+....+.
T Consensus 172 l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~ 241 (561)
T 3da1_A 172 LTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRS 241 (561)
T ss_dssp HHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTC
T ss_pred HHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCC
Confidence 3344455567889999998 8988753 3 355543 3 4789999999999876555554443
No 248
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.76 E-value=0.00011 Score=67.69 Aligned_cols=49 Identities=16% Similarity=0.265 Sum_probs=34.5
Q ss_pred HHHHHHHHHhCCCEEEeC-ceEEEe--CCeE---EEc-CCcEEEeeEEEEcCCCCCc
Q 023375 71 RHYATTQLSKSGVRLVRG-IVKDVD--SQKL---ILN-DGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 71 ~~~~~~~l~~~gV~v~~~-~V~~v~--~~~v---~~~-~g~~i~~d~vi~a~G~~~~ 120 (283)
...+.+.+++.||+++.+ .| ++. ++.+ .+. ++.++.+|.||+|+|..+.
T Consensus 122 ~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 122 FNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp HHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGG
T ss_pred HHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcc
Confidence 344555566789999999 68 874 3433 443 3345789999999999876
No 249
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.71 E-value=0.00011 Score=70.29 Aligned_cols=52 Identities=19% Similarity=0.183 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHhCCC--EEEeC-ceEEEeCC------e--EEEc------CC--cEEEeeEEEEcCCCCCc
Q 023375 69 RLRHYATTQLSKSGV--RLVRG-IVKDVDSQ------K--LILN------DG--TEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 69 ~~~~~~~~~l~~~gV--~v~~~-~V~~v~~~------~--v~~~------~g--~~i~~d~vi~a~G~~~~ 120 (283)
.+...+.+.+++.|+ +++.+ +|++++.+ . |+++ +| +++.+|.||.|.|....
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSN 212 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchH
Confidence 566677777888877 99998 88888532 2 4444 45 57999999999998764
No 250
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.62 E-value=0.00043 Score=65.03 Aligned_cols=49 Identities=16% Similarity=0.225 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEeCC--e--EEEcC---C--cEEEeeEEEEcCCCCCc
Q 023375 69 RLRHYATTQLSKSGVRLVRG-IVKDVDSQ--K--LILND---G--TEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 69 ~~~~~~~~~l~~~gV~v~~~-~V~~v~~~--~--v~~~~---g--~~i~~d~vi~a~G~~~~ 120 (283)
.+.+.+.+.+++. ++.+ +|++++.+ + +++.+ | +++.+|.||.|.|....
T Consensus 139 ~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 139 WLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGASSP 197 (549)
T ss_dssp HHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCCCcH
Confidence 3445555666655 7778 78888543 3 44544 6 47999999999998653
No 251
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.61 E-value=0.00044 Score=62.92 Aligned_cols=58 Identities=28% Similarity=0.372 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEeC----------------C----eEEEcCCcEE--EeeEEEEcCCCCCchhhhc
Q 023375 69 RLRHYATTQLSKSGVRLVRG-IVKDVDS----------------Q----KLILNDGTEV--PYGLLVWSTGVGPSTLVKS 125 (283)
Q Consensus 69 ~~~~~~~~~l~~~gV~v~~~-~V~~v~~----------------~----~v~~~~g~~i--~~d~vi~a~G~~~~~~~~~ 125 (283)
.+...+.+.+++.|++++.+ +|+++.. + .|.+.+| ++ .+|.||+|+|.....+...
T Consensus 182 ~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~~l~~~ 260 (448)
T 3axb_A 182 KVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSNRLLNP 260 (448)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHHHHHGG
T ss_pred HHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHHHHHHH
Confidence 45556667778899999998 8998854 2 2556666 68 9999999999876555555
Q ss_pred cC
Q 023375 126 LD 127 (283)
Q Consensus 126 ~~ 127 (283)
++
T Consensus 261 ~g 262 (448)
T 3axb_A 261 LG 262 (448)
T ss_dssp GT
T ss_pred cC
Confidence 44
No 252
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.60 E-value=0.00025 Score=65.84 Aligned_cols=106 Identities=13% Similarity=0.124 Sum_probs=65.6
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CC-------CCC---------------------
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EI-------LSS--------------------- 65 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~-------l~~--------------------- 65 (283)
..|+|||+||+|+.+|..|.+.+...+...............+|+. .+ +|.
T Consensus 40 ~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~ 119 (501)
T 4b63_A 40 HDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSF 119 (501)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTT
T ss_pred CcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCcc
Confidence 4699999999999999999876532111111111122445566653 11 110
Q ss_pred -----------------------CCHHHHHHHHHHHHhCCCEEEeC-ceEEEeCC------------eEEEcCC-----c
Q 023375 66 -----------------------FDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ------------KLILNDG-----T 104 (283)
Q Consensus 66 -----------------------~~~~~~~~~~~~l~~~gV~v~~~-~V~~v~~~------------~v~~~~g-----~ 104 (283)
...+..+|++..-++.+..+..+ +|++|+.. .|++.++ +
T Consensus 120 sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~ 199 (501)
T 4b63_A 120 TFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEIS 199 (501)
T ss_dssp SHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEE
T ss_pred chHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEE
Confidence 01356667776667777778888 78888521 3555443 3
Q ss_pred EEEeeEEEEcCCCCCc
Q 023375 105 EVPYGLLVWSTGVGPS 120 (283)
Q Consensus 105 ~i~~d~vi~a~G~~~~ 120 (283)
++.++.||+|+|..|.
T Consensus 200 ~~~ar~vVlatG~~P~ 215 (501)
T 4b63_A 200 ARRTRKVVIAIGGTAK 215 (501)
T ss_dssp EEEEEEEEECCCCEEC
T ss_pred EEEeCEEEECcCCCCC
Confidence 6889999999998765
No 253
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.43 E-value=9.2e-05 Score=61.19 Aligned_cols=32 Identities=19% Similarity=0.325 Sum_probs=29.7
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..|+||||||+|+.+|..|++.+ .+|+|+|+.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G--------------~~V~v~Ek~ 34 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAG--------------HQVHLFDKS 34 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECC
Confidence 36999999999999999999988 999999986
No 254
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.32 E-value=0.00092 Score=63.10 Aligned_cols=52 Identities=12% Similarity=0.094 Sum_probs=36.3
Q ss_pred HHHHHHhCCCEEEeC-ceEEEeC--Ce---EEEc---CCc--EEEeeEEEEcCCCCCchhhhc
Q 023375 74 ATTQLSKSGVRLVRG-IVKDVDS--QK---LILN---DGT--EVPYGLLVWSTGVGPSTLVKS 125 (283)
Q Consensus 74 ~~~~l~~~gV~v~~~-~V~~v~~--~~---v~~~---~g~--~i~~d~vi~a~G~~~~~~~~~ 125 (283)
+.+.+.+.|++++++ +|+++.. +. |++. +|+ ++.+|.||.|+|.....+...
T Consensus 194 l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~ 256 (571)
T 2rgh_A 194 NIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNL 256 (571)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTT
T ss_pred HHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHh
Confidence 344556789999998 8888853 33 5543 343 699999999999765555443
No 255
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.28 E-value=0.0014 Score=62.89 Aligned_cols=21 Identities=33% Similarity=0.640 Sum_probs=20.0
Q ss_pred CeEEEEccCcHHHHHHHHHHH
Q 023375 15 LHCVVVGGGPTGVEFSGELSD 35 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~ 35 (283)
..|+|||||++|+.+|..|++
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~ 29 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSE 29 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHH
T ss_pred CcEEEECcCHHHHHHHHHHhc
Confidence 579999999999999999998
No 256
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.26 E-value=0.0025 Score=62.25 Aligned_cols=37 Identities=16% Similarity=0.210 Sum_probs=30.2
Q ss_pred CCCEEEeC-ceEEEeCC----eEEEcCCcEEEeeEEEEcCCC
Q 023375 81 SGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGV 117 (283)
Q Consensus 81 ~gV~v~~~-~V~~v~~~----~v~~~~g~~i~~d~vi~a~G~ 117 (283)
.|++++++ +|++|+.+ .|++.+|+++.+|.||+|++.
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp TTSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCH
T ss_pred hCCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCH
Confidence 37899999 89999754 366678889999999999954
No 257
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.24 E-value=0.001 Score=63.26 Aligned_cols=51 Identities=18% Similarity=0.174 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhCC-CEEEeC-ceEEEe--CC---eEEE---cCCc--EEEeeEEEEcCCCCCc
Q 023375 70 LRHYATTQLSKSG-VRLVRG-IVKDVD--SQ---KLIL---NDGT--EVPYGLLVWSTGVGPS 120 (283)
Q Consensus 70 ~~~~~~~~l~~~g-V~v~~~-~V~~v~--~~---~v~~---~~g~--~i~~d~vi~a~G~~~~ 120 (283)
+...+.+.+.+.| |+++.+ .|+++. ++ +|.. .+|+ ++.++.||+|+|....
T Consensus 136 l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~ 198 (602)
T 1kf6_A 136 MLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGR 198 (602)
T ss_dssp HHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGG
T ss_pred HHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcc
Confidence 3344455566678 999999 788774 33 2332 4676 6899999999998553
No 258
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.23 E-value=0.0031 Score=59.65 Aligned_cols=48 Identities=15% Similarity=0.012 Sum_probs=33.9
Q ss_pred HHHHHHHhCCCEEEeC-ceEEEeC--C----eEEE---cCCc--EEEeeEEEEcCCCCCc
Q 023375 73 YATTQLSKSGVRLVRG-IVKDVDS--Q----KLIL---NDGT--EVPYGLLVWSTGVGPS 120 (283)
Q Consensus 73 ~~~~~l~~~gV~v~~~-~V~~v~~--~----~v~~---~~g~--~i~~d~vi~a~G~~~~ 120 (283)
.+.+.+++.||+++.+ .|+++.. + +|.. .+|+ ++.++.||+|+|....
T Consensus 148 ~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 148 TLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGR 207 (588)
T ss_dssp HHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCcc
Confidence 3445556779999999 7888742 2 2443 3565 6899999999998553
No 259
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.10 E-value=0.0012 Score=61.97 Aligned_cols=31 Identities=19% Similarity=0.470 Sum_probs=28.0
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..|+|||||++|+.+|.+|++ + .+|+|+|+.
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G--------------~~V~vlEk~ 39 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-Q--------------HQVIVLSKG 39 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-T--------------SCEEEECSS
T ss_pred CCEEEECccHHHHHHHHHHhc-C--------------CcEEEEECC
Confidence 589999999999999999998 6 788888875
No 260
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.99 E-value=0.0058 Score=58.19 Aligned_cols=47 Identities=17% Similarity=0.041 Sum_probs=32.6
Q ss_pred HHHHHHhCCCEEEeC-ceEEEe--CC---eEEE---cCCc--EEEeeEEEEcCCCCCc
Q 023375 74 ATTQLSKSGVRLVRG-IVKDVD--SQ---KLIL---NDGT--EVPYGLLVWSTGVGPS 120 (283)
Q Consensus 74 ~~~~l~~~gV~v~~~-~V~~v~--~~---~v~~---~~g~--~i~~d~vi~a~G~~~~ 120 (283)
+.+.+.+.||+++.+ .|.++. ++ +|.. .+|+ .+.++.||+|+|....
T Consensus 161 L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 218 (621)
T 2h88_A 161 LYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGR 218 (621)
T ss_dssp HHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCcccc
Confidence 334445678999988 787774 33 3444 3565 6899999999998654
No 261
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=96.93 E-value=0.00048 Score=63.52 Aligned_cols=42 Identities=17% Similarity=0.190 Sum_probs=33.4
Q ss_pred HHHhCCCEEEeC-ceEEEeC--C---eEEEcCCcEEEeeEEEEcCCCC
Q 023375 77 QLSKSGVRLVRG-IVKDVDS--Q---KLILNDGTEVPYGLLVWSTGVG 118 (283)
Q Consensus 77 ~l~~~gV~v~~~-~V~~v~~--~---~v~~~~g~~i~~d~vi~a~G~~ 118 (283)
.+++.|++|+++ +|++|.. + +|+++||+++.+|.||.+++..
T Consensus 230 ~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 230 LFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC--
T ss_pred HHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHH
Confidence 345789999999 8999853 3 4788999999999999988753
No 262
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.53 E-value=0.0069 Score=52.87 Aligned_cols=75 Identities=17% Similarity=0.168 Sum_probs=54.1
Q ss_pred ccCeEEEEccCcHHHH-HHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 13 RLLHCVVVGGGPTGVE-FSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve-~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
..++|.|||.|.+|+. +|..|.+++ .+|++.+.....+ ..+.|++.||+++.+ ..
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G--------------~~V~~~D~~~~~~---------~~~~L~~~gi~v~~g~~~ 59 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAG--------------FEVSGCDAKMYPP---------MSTQLEALGIDVYEGFDA 59 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTT--------------CEEEEEESSCCTT---------HHHHHHHTTCEEEESCCG
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCC--------------CEEEEEcCCCCcH---------HHHHHHhCCCEEECCCCH
Confidence 3579999999999997 777888887 9999999863211 235578889999876 22
Q ss_pred EEEeCCeEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 91 KDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 91 ~~v~~~~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
..+.. -.+|.||.++|..+.
T Consensus 60 ~~l~~----------~~~d~vV~Spgi~~~ 79 (326)
T 3eag_A 60 AQLDE----------FKADVYVIGNVAKRG 79 (326)
T ss_dssp GGGGS----------CCCSEEEECTTCCTT
T ss_pred HHcCC----------CCCCEEEECCCcCCC
Confidence 11110 137889999988775
No 263
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=96.48 E-value=0.002 Score=58.46 Aligned_cols=32 Identities=22% Similarity=0.305 Sum_probs=30.0
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.+|+|||||++|+.+|..|++.+ .+|+|||+.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G--------------~~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHD--------------VDVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHHCC--------------CeEEEEcCC
Confidence 58999999999999999999987 999999975
No 264
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=96.39 E-value=0.0027 Score=57.05 Aligned_cols=43 Identities=23% Similarity=0.264 Sum_probs=33.1
Q ss_pred HHHHhCCCEEEeC-ceEEEeC--Ce---EEEcCCcEEEeeEEEEcCCCCC
Q 023375 76 TQLSKSGVRLVRG-IVKDVDS--QK---LILNDGTEVPYGLLVWSTGVGP 119 (283)
Q Consensus 76 ~~l~~~gV~v~~~-~V~~v~~--~~---v~~~~g~~i~~d~vi~a~G~~~ 119 (283)
+.+++.|++++++ +|++|.. +. |++ +|+++.+|.||+|+|...
T Consensus 204 ~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~ 252 (425)
T 3ka7_A 204 TVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAA 252 (425)
T ss_dssp HHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHHH
T ss_pred HHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHHH
Confidence 4456789999999 8998853 33 444 588899999999998643
No 265
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=96.36 E-value=0.0035 Score=57.70 Aligned_cols=33 Identities=33% Similarity=0.402 Sum_probs=30.4
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..+|+|||||++|+++|..|++.+ .+|+|+|+.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g--------------~~v~vlE~~ 65 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAG--------------HQVTVLEAS 65 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHT--------------CEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEECC
Confidence 568999999999999999999887 899999986
No 266
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.34 E-value=0.0061 Score=55.69 Aligned_cols=77 Identities=16% Similarity=0.239 Sum_probs=55.8
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeC-ceE
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IVK 91 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V~ 91 (283)
+.++|+|||.|.+|+.+|..|.+.+ .+|++.+..... .++ ..+.|++.||+++.+ ...
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G--------------~~V~~~D~~~~~--~~~-----~~~~L~~~gi~~~~g~~~~ 66 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLG--------------AIVTVNDGKPFD--ENP-----TAQSLLEEGIKVVCGSHPL 66 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTT--------------CEEEEEESSCGG--GCH-----HHHHHHHTTCEEEESCCCG
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCC--------------CEEEEEeCCccc--CCh-----HHHHHHhCCCEEEECCChH
Confidence 4579999999999999999999887 999999986311 111 235678889999876 311
Q ss_pred EEeCCeEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 92 DVDSQKLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 92 ~v~~~~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
++ +.+ .+|.||.++|+.+.
T Consensus 67 ~~------~~~----~~d~vv~spgi~~~ 85 (451)
T 3lk7_A 67 EL------LDE----DFCYMIKNPGIPYN 85 (451)
T ss_dssp GG------GGS----CEEEEEECTTSCTT
T ss_pred Hh------hcC----CCCEEEECCcCCCC
Confidence 11 000 17899999998775
No 267
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=96.29 E-value=0.0041 Score=54.72 Aligned_cols=32 Identities=22% Similarity=0.257 Sum_probs=29.5
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.+|+|||||.+|+.+|.+|++.+ .+|+|+|+.
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G--------------~~V~vle~~ 38 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKG--------------YSVHILARD 38 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CEEEEEecc
Confidence 58999999999999999999877 899999974
No 268
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=96.28 E-value=0.0031 Score=58.09 Aligned_cols=38 Identities=32% Similarity=0.431 Sum_probs=31.7
Q ss_pred hCCCEEEeC-ceEEEeCC--eEEEcCCcEEEeeEEEEcCCC
Q 023375 80 KSGVRLVRG-IVKDVDSQ--KLILNDGTEVPYGLLVWSTGV 117 (283)
Q Consensus 80 ~~gV~v~~~-~V~~v~~~--~v~~~~g~~i~~d~vi~a~G~ 117 (283)
+.|++++++ +|++|..+ .+++.+|+++.+|.||.++..
T Consensus 234 ~~g~~i~~~~~V~~I~~~~~~v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 234 KEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp GGGEEESGGGCEEEEETTTTEEEETTSCEEEEEEEEECSCH
T ss_pred hcCeeeecceEEEEEEccCCEEEEcCCCEEECCEEEECCCH
Confidence 457788888 89998754 688999999999999998864
No 269
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=96.21 E-value=0.0034 Score=57.34 Aligned_cols=32 Identities=38% Similarity=0.481 Sum_probs=28.5
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCcc--EEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI--HVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~--~V~li~~~ 60 (283)
++|+|||||.+|+.+|.+|++.+ . +|+|+|+.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G--------------~~~~V~vlEa~ 36 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAP--------------CPPKVVLVESS 36 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSS--------------SCCEEEEECSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCC--------------CCCcEEEEeCC
Confidence 58999999999999999999876 5 88888874
No 270
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=96.15 E-value=0.0047 Score=55.11 Aligned_cols=34 Identities=29% Similarity=0.335 Sum_probs=30.9
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+..+|+|||||++|+-+|..|++.+ .+|+|+|+.
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G--------------~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAG--------------HDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTS--------------CEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCC--------------CcEEEEecc
Confidence 4579999999999999999999876 899999986
No 271
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.10 E-value=0.0066 Score=50.06 Aligned_cols=75 Identities=16% Similarity=0.143 Sum_probs=51.8
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeCceEE
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKD 92 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~ 92 (283)
+.++|+|||||.+|...|..|.+.+ .+|+++.+. ..+++ .+...+.+|+++.....
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~G--------------A~VtVvap~-----~~~~l----~~l~~~~~i~~i~~~~~- 85 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEG--------------AAITVVAPT-----VSAEI----NEWEAKGQLRVKRKKVG- 85 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGC--------------CCEEEECSS-----CCHHH----HHHHHTTSCEEECSCCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--------------CEEEEECCC-----CCHHH----HHHHHcCCcEEEECCCC-
Confidence 4579999999999999999999887 899999753 33443 33334556777654211
Q ss_pred EeCCeEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 93 VDSQKLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 93 v~~~~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
++. --.+|.||.|||....
T Consensus 86 --~~d-------L~~adLVIaAT~d~~~ 104 (223)
T 3dfz_A 86 --EED-------LLNVFFIVVATNDQAV 104 (223)
T ss_dssp --GGG-------SSSCSEEEECCCCTHH
T ss_pred --HhH-------hCCCCEEEECCCCHHH
Confidence 111 1138999999997653
No 272
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=96.03 E-value=0.0062 Score=55.86 Aligned_cols=33 Identities=39% Similarity=0.497 Sum_probs=30.1
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..+|+|||||++|+.+|..|++.+ .+|+|+|+.
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g--------------~~v~v~E~~ 43 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAG--------------YKVTVLEAR 43 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC--------------CCEEEEecc
Confidence 468999999999999999999877 899999986
No 273
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=96.00 E-value=0.0053 Score=55.05 Aligned_cols=32 Identities=31% Similarity=0.322 Sum_probs=29.3
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
++|+|||||++|+++|..+++.+ .+|+|+|..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G--------------~~V~liE~~ 33 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLG--------------VPVRLFEMR 33 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT--------------CCEEEECCT
T ss_pred CCEEEECchHHHHHHHHHHHHCC--------------CcEEEEecc
Confidence 57999999999999999999987 899999863
No 274
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=95.96 E-value=0.0066 Score=53.10 Aligned_cols=38 Identities=13% Similarity=0.220 Sum_probs=29.5
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
++|+|||||.+|+.+|.+|++.+... .+..+|+|+|+.
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~--------~p~~~V~vlE~~ 38 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSV--------LQPLDIKVYADR 38 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTT--------SSSCEEEEEESS
T ss_pred CcEEEECCCHHHHHHHHHHHHhcccc--------CCCceEEEEECC
Confidence 47999999999999999999875100 012799999986
No 275
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=95.94 E-value=0.0056 Score=56.78 Aligned_cols=37 Identities=11% Similarity=-0.056 Sum_probs=29.8
Q ss_pred CCEEEeC-ceEEEeCC----eEEEcCCcEEEeeEEEEcCCCC
Q 023375 82 GVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGVG 118 (283)
Q Consensus 82 gV~v~~~-~V~~v~~~----~v~~~~g~~i~~d~vi~a~G~~ 118 (283)
|++++++ +|++|+.+ .|++.+|+++.+|.||+|++..
T Consensus 226 g~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 267 (520)
T 1s3e_A 226 GDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPT 267 (520)
T ss_dssp GGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGG
T ss_pred CCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHH
Confidence 6778888 79998643 3566788899999999999864
No 276
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=95.70 E-value=0.0077 Score=54.61 Aligned_cols=38 Identities=32% Similarity=0.447 Sum_probs=30.3
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.+|+|||||.+|+.+|..|++.+... .++.+|+|+|+.
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~--------~~~~~V~vlEa~ 43 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEK--------NLPLELTLVEAS 43 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTT--------TCSEEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhcccc--------CCCCCEEEEECC
Confidence 58999999999999999999876110 123789999885
No 277
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=95.65 E-value=0.0077 Score=54.99 Aligned_cols=33 Identities=27% Similarity=0.432 Sum_probs=29.1
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..+|+|||||.+|+.+|..|++.+ .+|+|+|+.
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g--------------~~v~v~E~~ 48 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRG--------------TDAVLLESS 48 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTT--------------CCEEEECSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC--------------CCEEEEEcC
Confidence 468999999999999999999876 789999875
No 278
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=95.64 E-value=0.011 Score=53.66 Aligned_cols=32 Identities=31% Similarity=0.521 Sum_probs=29.0
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.+|+|||||++|+.+|..|++.+ .+|+|+|+.
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g--------------~~v~v~E~~ 37 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAG--------------LSVAVIEAR 37 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CcEEEEECC
Confidence 58999999999999999999876 789999875
No 279
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=95.61 E-value=0.012 Score=52.47 Aligned_cols=32 Identities=22% Similarity=0.373 Sum_probs=29.4
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.+|+|||||.+|+.+|..|++.+ .+|+++|+.
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g--------------~~v~v~E~~ 35 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKG--------------HQVHIIDQR 35 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT--------------CEEEEEESS
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CcEEEEEec
Confidence 58999999999999999999876 899999986
No 280
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=95.61 E-value=0.0095 Score=53.42 Aligned_cols=33 Identities=21% Similarity=0.286 Sum_probs=29.6
Q ss_pred cCeEEEEccCcHHHHHHHHHHHh-hhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDF-IMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~-~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..+|+|||||.+|+-+|..|++. + .+|+|+|+.
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g--------------~~v~v~E~~ 40 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLD--------------KRVLVLERR 40 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSC--------------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCC--------------CCEEEEeCC
Confidence 36899999999999999999987 5 789999986
No 281
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=95.59 E-value=0.01 Score=54.59 Aligned_cols=33 Identities=27% Similarity=0.375 Sum_probs=30.0
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..+|+|||||.+|+.+|..|++.+ .+|+|+|+.
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g--------------~~v~v~E~~ 45 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHG--------------LNVTVFEAE 45 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTS--------------CEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC--------------CcEEEEEeC
Confidence 468999999999999999999876 899999986
No 282
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=95.58 E-value=0.0094 Score=54.37 Aligned_cols=34 Identities=29% Similarity=0.236 Sum_probs=30.9
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 61 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~ 61 (283)
..+|+|||||.+|+.+|..|++.+ .+|+++|++.
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~G--------------~~V~vlE~~~ 44 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVDG--------------KKVLHIDKQD 44 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC--------------CeEEEEeCCC
Confidence 358999999999999999999887 8999999973
No 283
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=95.43 E-value=0.01 Score=54.57 Aligned_cols=32 Identities=28% Similarity=0.458 Sum_probs=28.8
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.+|+|||||.+|+.+|..|++.+ .+|+|+|+.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g--------------~~v~v~E~~ 71 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAG--------------FKTLLLEAR 71 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTT--------------CCEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHHCC--------------CCEEEEeCC
Confidence 68999999999999999999876 788888875
No 284
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=95.41 E-value=0.012 Score=52.81 Aligned_cols=33 Identities=18% Similarity=0.306 Sum_probs=29.6
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..+|+|||||++|+.+|..|++.+ .+|+++|+.
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g--------------~~v~v~E~~ 61 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSG--------------QRVLIVDRR 61 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSS
T ss_pred CCCEEEECccHHHHHHHHHHHHCC--------------CceEEEecc
Confidence 458999999999999999999876 889999986
No 285
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=95.37 E-value=0.011 Score=56.70 Aligned_cols=35 Identities=29% Similarity=0.546 Sum_probs=31.0
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
...++|+|||+|++|+.+|..|++.+ .+|+++|+.
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g--------------~~v~~~e~~ 139 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFG--------------MDVTLLEAR 139 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCC--------------CeEEEEecC
Confidence 45579999999999999999999877 889999875
No 286
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=95.35 E-value=0.014 Score=52.33 Aligned_cols=35 Identities=20% Similarity=0.318 Sum_probs=29.4
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+..+|+|||||++|+.+|..|++.+. .+|+++|+.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~-------------~~v~v~E~~ 39 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGF-------------HDYTILERT 39 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTC-------------CCEEEECSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCC-------------CcEEEEECC
Confidence 34689999999999999999997641 589999975
No 287
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.31 E-value=0.023 Score=43.58 Aligned_cols=37 Identities=22% Similarity=0.219 Sum_probs=31.3
Q ss_pred HHcccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 10 ~~~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
++....+|+|+|+|..|..+|..|...+ .+|++++++
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g--------------~~V~vid~~ 51 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSG--------------HSVVVVDKN 51 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCC--------------CeEEEEECC
Confidence 3455679999999999999999999876 899999875
No 288
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=95.13 E-value=0.014 Score=51.75 Aligned_cols=32 Identities=28% Similarity=0.432 Sum_probs=28.7
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.+|+|||||++|+.+|..|++.+ .+|+++|+.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g--------------~~v~v~E~~ 33 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLN--------------KKVLVIEKR 33 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGT--------------CCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCC--------------CcEEEEecC
Confidence 37999999999999999999876 889999986
No 289
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=95.12 E-value=0.017 Score=56.87 Aligned_cols=35 Identities=29% Similarity=0.546 Sum_probs=31.3
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
...++|+|||+|++|+.+|..|++.+ .+|+|+|+.
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g--------------~~v~v~E~~ 310 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFG--------------MDVTLLEAR 310 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCC--------------CcEEEEEec
Confidence 44579999999999999999999887 899999975
No 290
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=95.12 E-value=0.017 Score=52.61 Aligned_cols=34 Identities=32% Similarity=0.414 Sum_probs=29.1
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.+|+|||||.+|+.+|.+|++.++ +.+|+|+|+.
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~g~------------~~~v~v~E~~ 38 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERAFP------------DLNITLLEAG 38 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHCT------------TSEEEEECSS
T ss_pred ccEEEECCCHHHHHHHHHHHHhCC------------CCCEEEEECC
Confidence 589999999999999999998752 2789999874
No 291
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=94.88 E-value=0.025 Score=53.86 Aligned_cols=34 Identities=32% Similarity=0.590 Sum_probs=30.7
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 62 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~ 62 (283)
..|+|||||++|+.+|.+|++.+ .+|+|||+...
T Consensus 47 ~dvvIIG~G~aGl~aA~~l~~~G--------------~~V~liE~~~~ 80 (623)
T 3pl8_A 47 YDVVIVGSGPIGCTYARELVGAG--------------YKVAMFDIGEI 80 (623)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSCC
T ss_pred CCEEEECCcHHHHHHHHHHHhCC--------------CcEEEEeccCC
Confidence 47999999999999999999887 89999998743
No 292
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=94.82 E-value=0.019 Score=53.12 Aligned_cols=34 Identities=18% Similarity=0.154 Sum_probs=27.2
Q ss_pred EEEeC-ceEEEeC---C--eEEEcCCcEEEeeEEEEcCCC
Q 023375 84 RLVRG-IVKDVDS---Q--KLILNDGTEVPYGLLVWSTGV 117 (283)
Q Consensus 84 ~v~~~-~V~~v~~---~--~v~~~~g~~i~~d~vi~a~G~ 117 (283)
+|+++ +|++|.. + .|++.+|+++.+|.||+|++.
T Consensus 216 ~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~ 255 (516)
T 1rsg_A 216 WLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQ 255 (516)
T ss_dssp GEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCH
T ss_pred EEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCH
Confidence 48888 8999963 2 366678889999999999974
No 293
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=94.75 E-value=0.048 Score=49.93 Aligned_cols=24 Identities=21% Similarity=0.264 Sum_probs=21.9
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhh
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFI 37 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~ 37 (283)
+|+|+|||||.+|+.+|..|++.+
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G 24 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAG 24 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTT
T ss_pred CCCEEEECCcHHHHHHHHHHHHCC
Confidence 478999999999999999999865
No 294
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=94.71 E-value=0.051 Score=50.17 Aligned_cols=73 Identities=19% Similarity=0.249 Sum_probs=53.0
Q ss_pred cccCeEEEEccCcHHHH-HHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeC-c
Q 023375 12 SRLLHCVVVGGGPTGVE-FSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-I 89 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve-~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~ 89 (283)
.+.++|.|||-|-+|+. +|..|.+.+ .+|+..+... ++ ..+.|++.||++..+ .
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~G--------------~~V~~~D~~~-----~~-----~~~~l~~~gi~~~~g~~ 75 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANEG--------------YQISGSDLAP-----NS-----VTQHLTALGAQIYFHHR 75 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHTT--------------CEEEEECSSC-----CH-----HHHHHHHTTCEEESSCC
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhCC--------------CeEEEEECCC-----CH-----HHHHHHHCCCEEECCCC
Confidence 35689999999999997 788888887 9999998652 11 234588899999876 2
Q ss_pred eEEEeCCeEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 90 VKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 90 V~~v~~~~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
...+ -.+|.||.++|+.+.
T Consensus 76 ~~~~------------~~~d~vV~Spgi~~~ 94 (494)
T 4hv4_A 76 PENV------------LDASVVVVSTAISAD 94 (494)
T ss_dssp GGGG------------TTCSEEEECTTSCTT
T ss_pred HHHc------------CCCCEEEECCCCCCC
Confidence 2111 127888998888774
No 295
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.53 E-value=0.13 Score=44.40 Aligned_cols=77 Identities=14% Similarity=0.221 Sum_probs=51.1
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEe---CceE
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVR---GIVK 91 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~---~~V~ 91 (283)
++|+|||+|..|.-+|..|++.+ .+|+++.+++ . +.+++.|+.+.. +...
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g--------------~~V~~~~r~~--------~-----~~i~~~Gl~~~~~~~g~~~ 55 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTG--------------HCVSVVSRSD--------Y-----ETVKAKGIRIRSATLGDYT 55 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTT--------------CEEEEECSTT--------H-----HHHHHHCEEEEETTTCCEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCC--------------CeEEEEeCCh--------H-----HHHHhCCcEEeecCCCcEE
Confidence 58999999999999999999876 8999997642 0 345566776654 1221
Q ss_pred EEeCCeEEEcCCc-EE-EeeEEEEcCCCCCc
Q 023375 92 DVDSQKLILNDGT-EV-PYGLLVWSTGVGPS 120 (283)
Q Consensus 92 ~v~~~~v~~~~g~-~i-~~d~vi~a~G~~~~ 120 (283)
+.+-.+. .+-+ .. ++|.||+|+-....
T Consensus 56 -~~~~~~~-~~~~~~~~~~DlVilavK~~~~ 84 (320)
T 3i83_A 56 -FRPAAVV-RSAAELETKPDCTLLCIKVVEG 84 (320)
T ss_dssp -ECCSCEE-SCGGGCSSCCSEEEECCCCCTT
T ss_pred -EeeeeeE-CCHHHcCCCCCEEEEecCCCCh
Confidence 1111221 2222 22 68999999987654
No 296
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.52 E-value=0.049 Score=40.43 Aligned_cols=32 Identities=22% Similarity=0.373 Sum_probs=28.6
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
++|+|+|+|..|..+|..|.+.+ .+|++++++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g--------------~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKG--------------HDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--------------CeEEEEECC
Confidence 68999999999999999998876 899999763
No 297
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.51 E-value=0.042 Score=41.98 Aligned_cols=81 Identities=14% Similarity=0.026 Sum_probs=49.7
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEE
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDV 93 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v 93 (283)
..+++|+|+|..|..+|..|.+.+ .+|+++++.. ++..+.+.+ ....|++++.+..++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g--------------~~V~vid~~~------~~~~~~~~~-~~~~~~~~i~gd~~~- 60 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRG--------------QNVTVISNLP------EDDIKQLEQ-RLGDNADVIPGDSND- 60 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECCC------HHHHHHHHH-HHCTTCEEEESCTTS-
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC--------------CCEEEEECCC------hHHHHHHHH-hhcCCCeEEEcCCCC-
Confidence 468999999999999999999876 8999997641 121222222 224577777652110
Q ss_pred eCCeEEEcCCcEEEeeEEEEcCCCCC
Q 023375 94 DSQKLILNDGTEVPYGLLVWSTGVGP 119 (283)
Q Consensus 94 ~~~~v~~~~g~~i~~d~vi~a~G~~~ 119 (283)
.+. +..-..-.+|.||.+++...
T Consensus 61 -~~~--l~~a~i~~ad~vi~~~~~d~ 83 (153)
T 1id1_A 61 -SSV--LKKAGIDRCRAILALSDNDA 83 (153)
T ss_dssp -HHH--HHHHTTTTCSEEEECSSCHH
T ss_pred -HHH--HHHcChhhCCEEEEecCChH
Confidence 000 11000114899999998643
No 298
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.43 E-value=0.043 Score=41.15 Aligned_cols=76 Identities=14% Similarity=0.084 Sum_probs=48.3
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeCceEE
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKD 92 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~ 92 (283)
..++++|+|+|..|..+|..|.+.+ .+|++++.+ ++. .+.+.+.|++++.+.+++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g--------------~~V~~id~~-------~~~----~~~~~~~~~~~~~gd~~~ 59 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAG--------------KKVLAVDKS-------KEK----IELLEDEGFDAVIADPTD 59 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESC-------HHH----HHHHHHTTCEEEECCTTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--------------CeEEEEECC-------HHH----HHHHHHCCCcEEECCCCC
Confidence 3468999999999999999999876 899999874 221 233445677766542110
Q ss_pred EeCCeEEEcCCcEEEeeEEEEcCCC
Q 023375 93 VDSQKLILNDGTEVPYGLLVWSTGV 117 (283)
Q Consensus 93 v~~~~v~~~~g~~i~~d~vi~a~G~ 117 (283)
. +.+. +-+ .-.+|.+|.++|.
T Consensus 60 ~--~~l~-~~~-~~~~d~vi~~~~~ 80 (141)
T 3llv_A 60 E--SFYR-SLD-LEGVSAVLITGSD 80 (141)
T ss_dssp H--HHHH-HSC-CTTCSEEEECCSC
T ss_pred H--HHHH-hCC-cccCCEEEEecCC
Confidence 0 0000 000 1148999999983
No 299
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=94.16 E-value=0.037 Score=50.45 Aligned_cols=36 Identities=14% Similarity=0.218 Sum_probs=27.7
Q ss_pred CCEEEeC-ceEEEeC--C--eEEEcCCcEEEeeEEEEcCCC
Q 023375 82 GVRLVRG-IVKDVDS--Q--KLILNDGTEVPYGLLVWSTGV 117 (283)
Q Consensus 82 gV~v~~~-~V~~v~~--~--~v~~~~g~~i~~d~vi~a~G~ 117 (283)
|++++++ +|++|+. + .|++.+|+++.+|.||+|++.
T Consensus 228 ~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 228 DPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASL 268 (472)
T ss_dssp CTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCH
T ss_pred ccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCH
Confidence 4567888 7888853 2 366678889999999999985
No 300
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=94.09 E-value=0.042 Score=50.49 Aligned_cols=34 Identities=29% Similarity=0.449 Sum_probs=28.6
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..+|+|||||++|+.+|..|++.+. .+|+++|+.
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~-------------~~v~v~E~~ 42 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGY-------------KNWHLYECN 42 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTC-------------CSEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCC-------------CCEEEEeCC
Confidence 4689999999999999999998651 578888875
No 301
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.01 E-value=0.061 Score=40.45 Aligned_cols=77 Identities=22% Similarity=0.242 Sum_probs=50.1
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEE
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDV 93 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v 93 (283)
..+|+|+|.|..|..+|..|.+.+ .+|++++.+. +. .+.+++.|+.++.+..++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g--------------~~v~vid~~~-------~~----~~~~~~~g~~~i~gd~~~~ 61 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASD--------------IPLVVIETSR-------TR----VDELRERGVRAVLGNAANE 61 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCH-------HH----HHHHHHTTCEEEESCTTSH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECCH-------HH----HHHHHHcCCCEEECCCCCH
Confidence 358999999999999999999877 8999998752 21 2234557888765421100
Q ss_pred eCCeEEEcCCcEEEeeEEEEcCCCCC
Q 023375 94 DSQKLILNDGTEVPYGLLVWSTGVGP 119 (283)
Q Consensus 94 ~~~~v~~~~g~~i~~d~vi~a~G~~~ 119 (283)
.+ +..-..-.+|.+|.+++...
T Consensus 62 ---~~-l~~a~i~~ad~vi~~~~~~~ 83 (140)
T 3fwz_A 62 ---EI-MQLAHLECAKWLILTIPNGY 83 (140)
T ss_dssp ---HH-HHHTTGGGCSEEEECCSCHH
T ss_pred ---HH-HHhcCcccCCEEEEECCChH
Confidence 00 00000124899999988543
No 302
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=93.98 E-value=0.044 Score=49.56 Aligned_cols=33 Identities=27% Similarity=0.248 Sum_probs=30.0
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..+|+|||+|.+|+.+|..|++.+ .+|+++|++
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~g--------------~~v~~~e~~ 38 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVNG--------------KKVLHMDRN 38 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC--------------CcEEEEecC
Confidence 358999999999999999999877 899999986
No 303
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=93.82 E-value=0.039 Score=52.86 Aligned_cols=32 Identities=16% Similarity=0.257 Sum_probs=28.9
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..|+|||||.+|+.+|.++++.+ .+|+|||+.
T Consensus 6 ~DVvVIGgG~AGL~AAl~aae~G--------------~~V~vlEK~ 37 (660)
T 2bs2_A 6 CDSLVIGGGLAGLRAAVATQQKG--------------LSTIVLSLI 37 (660)
T ss_dssp CSEEEECCSHHHHHHHHHHHTTT--------------CCEEEECSS
T ss_pred ccEEEECchHHHHHHHHHHHHCC--------------CcEEEEecc
Confidence 47999999999999999999877 889999875
No 304
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=93.70 E-value=0.05 Score=49.94 Aligned_cols=33 Identities=21% Similarity=0.408 Sum_probs=30.4
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 61 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~ 61 (283)
.+|+|||+|.+|+.+|..|++.+ .+|+++|++.
T Consensus 21 ~dv~iiG~G~~g~~~a~~l~~~g--------------~~v~~~e~~~ 53 (475)
T 3p1w_A 21 YDVIILGTGLKECILSGLLSHYG--------------KKILVLDRNP 53 (475)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CcEEEEeccC
Confidence 58999999999999999999887 8999999974
No 305
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=93.67 E-value=0.073 Score=43.22 Aligned_cols=36 Identities=14% Similarity=0.003 Sum_probs=30.8
Q ss_pred CCCCEEEeccccccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 146 SVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 146 ~~~~VfaiGD~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
+.++||++||++. ....+.|+..|+.+|+.|...++
T Consensus 293 ~~~~v~l~GDa~~----------g~gv~~A~~sG~~aA~~I~~~L~ 328 (336)
T 3kkj_A 293 ADLGIYVCGDWCL----------SGRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp TTTTEEECCGGGT----------TSSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEecccC----------CcCHHHHHHHHHHHHHHHHHHhh
Confidence 5789999999874 23578899999999999998886
No 306
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=93.52 E-value=0.16 Score=43.59 Aligned_cols=75 Identities=21% Similarity=0.325 Sum_probs=47.3
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEe
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVD 94 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v~ 94 (283)
.+|+|||+|..|.-+|..|+ .+ .+|+++.++. + ..+.+++.|+.+.........
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g--------------~~V~~~~r~~-------~----~~~~l~~~G~~~~~~~~~~~~ 56 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LY--------------HDVTVVTRRQ-------E----QAAAIQSEGIRLYKGGEEFRA 56 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TT--------------SEEEEECSCH-------H----HHHHHHHHCEEEEETTEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHh-cC--------------CceEEEECCH-------H----HHHHHHhCCceEecCCCeecc
Confidence 58999999999999999999 65 8999997641 1 123455668777643111111
Q ss_pred CCeEEEcCCcEEEeeEEEEcCCC
Q 023375 95 SQKLILNDGTEVPYGLLVWSTGV 117 (283)
Q Consensus 95 ~~~v~~~~g~~i~~d~vi~a~G~ 117 (283)
.+.......-++|.||+|+-.
T Consensus 57 --~~~~~~~~~~~~D~vilavK~ 77 (307)
T 3ego_A 57 --DCSADTSINSDFDLLVVTVKQ 77 (307)
T ss_dssp --CCEEESSCCSCCSEEEECCCG
T ss_pred --cccccccccCCCCEEEEEeCH
Confidence 111111111258999998764
No 307
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=93.50 E-value=0.043 Score=50.72 Aligned_cols=33 Identities=39% Similarity=0.502 Sum_probs=28.4
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
-.++|||||.+|+-+|..|++.. +.+|.|+|++
T Consensus 18 yD~IIVGsG~aG~v~A~rLse~~-------------~~~VLvLEaG 50 (526)
T 3t37_A 18 CDIVIVGGGSAGSLLAARLSEDP-------------DSRVLLIEAG 50 (526)
T ss_dssp EEEEEECCSHHHHHHHHHHTTST-------------TSCEEEECSS
T ss_pred eeEEEECccHHHHHHHHHHHhCC-------------CCeEEEEcCC
Confidence 58999999999999999998732 2799999986
No 308
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=93.49 E-value=0.057 Score=51.74 Aligned_cols=32 Identities=19% Similarity=0.311 Sum_probs=28.9
Q ss_pred CeEEEEccCcHHHHHHHHHHHh------hhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDF------IMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~------~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
-.|+|||||.+|+.+|.+|++. + .+|+||++.
T Consensus 23 ~DVvVVG~G~AGL~AAl~aa~~~~~~~pG--------------~~V~vleK~ 60 (662)
T 3gyx_A 23 VDLLMVGGGMGNCGAAFEAVRWADKYAPE--------------AKILLVDKA 60 (662)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHHCTT--------------CCEEEECSS
T ss_pred cCEEEECCCHHHHHHHHHHHhhccccCCC--------------CcEEEEEec
Confidence 5799999999999999999986 5 889999974
No 309
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=93.44 E-value=0.028 Score=53.72 Aligned_cols=33 Identities=27% Similarity=0.354 Sum_probs=28.3
Q ss_pred cCeEEEEccCcHHHHHHHHHH---H-hhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELS---D-FIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~---~-~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
...|+|||||.+|+.+|.+++ + .+ .+|+|||+.
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G--------------~~V~vlEK~ 58 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGG--------------LKVTLVEKA 58 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTT--------------CCEEEECSS
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCC--------------CeEEEEeCc
Confidence 358999999999999999999 4 55 789998875
No 310
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=93.32 E-value=0.06 Score=50.20 Aligned_cols=33 Identities=30% Similarity=0.472 Sum_probs=28.7
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
...++|||+|++|+-+|..|++.+ .+|.++|++
T Consensus 7 ~~D~iIvG~G~aG~~~A~~L~~~g--------------~~VlvlE~g 39 (546)
T 1kdg_A 7 PYDYIIVGAGPGGIIAADRLSEAG--------------KKVLLLERG 39 (546)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSS
T ss_pred ceeEEEECcCHHHHHHHHHHHhCC--------------CeEEEEeCC
Confidence 358999999999999999999876 788888865
No 311
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.26 E-value=0.12 Score=44.53 Aligned_cols=77 Identities=16% Similarity=0.193 Sum_probs=49.3
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeC--ceEE
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG--IVKD 92 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~--~V~~ 92 (283)
++|+|||+|..|.-+|..|++.+ .+|+++.++. . +.+++.|+.+... ...
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g--------------~~V~~~~r~~--------~-----~~i~~~g~~~~~~~g~~~- 54 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSG--------------EDVHFLLRRD--------Y-----EAIAGNGLKVFSINGDFT- 54 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTS--------------CCEEEECSTT--------H-----HHHHHTCEEEEETTCCEE-
T ss_pred CEEEEECcCHHHHHHHHHHHHCC--------------CeEEEEEcCc--------H-----HHHHhCCCEEEcCCCeEE-
Confidence 58999999999999999999876 7899997642 1 3456678776532 221
Q ss_pred EeCCeEEEcCCcE-EEeeEEEEcCCCCCc
Q 023375 93 VDSQKLILNDGTE-VPYGLLVWSTGVGPS 120 (283)
Q Consensus 93 v~~~~v~~~~g~~-i~~d~vi~a~G~~~~ 120 (283)
+.+-.+. .+-+. -++|.||+|+-....
T Consensus 55 ~~~~~~~-~~~~~~~~~D~vilavk~~~~ 82 (312)
T 3hn2_A 55 LPHVKGY-RAPEEIGPMDLVLVGLKTFAN 82 (312)
T ss_dssp ESCCCEE-SCHHHHCCCSEEEECCCGGGG
T ss_pred Eeeceee-cCHHHcCCCCEEEEecCCCCc
Confidence 1111111 11111 258999998876543
No 312
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=93.25 E-value=0.29 Score=45.40 Aligned_cols=74 Identities=20% Similarity=0.158 Sum_probs=51.2
Q ss_pred ccCeEEEEccCcHHHHH-HHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeC-ce
Q 023375 13 RLLHCVVVGGGPTGVEF-SGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG-IV 90 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~-A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~-~V 90 (283)
+.++|.|||-|-+|+.. |..|.+.+ .+|+..+....-+ ..+.|++.||+++.+ ..
T Consensus 18 ~~~~i~~iGiGg~Gms~lA~~l~~~G--------------~~V~~sD~~~~~~---------~~~~L~~~gi~~~~G~~~ 74 (524)
T 3hn7_A 18 QGMHIHILGICGTFMGSLALLARALG--------------HTVTGSDANIYPP---------MSTQLEQAGVTIEEGYLI 74 (524)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT--------------CEEEEEESCCCTT---------HHHHHHHTTCEEEESCCG
T ss_pred cCCEEEEEEecHhhHHHHHHHHHhCC--------------CEEEEECCCCCcH---------HHHHHHHCCCEEECCCCH
Confidence 45799999999999985 66667776 9999998863211 235678889999876 22
Q ss_pred EEEeCCeEEEcCCcEEEeeEEEEcCCCCCc
Q 023375 91 KDVDSQKLILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 91 ~~v~~~~v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
..+. -.+|.||.++|+.+.
T Consensus 75 ~~~~-----------~~~d~vV~Spgi~~~ 93 (524)
T 3hn7_A 75 AHLQ-----------PAPDLVVVGNAMKRG 93 (524)
T ss_dssp GGGC-----------SCCSEEEECTTCCTT
T ss_pred HHcC-----------CCCCEEEECCCcCCC
Confidence 1110 136778888887664
No 313
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=93.21 E-value=0.048 Score=50.85 Aligned_cols=31 Identities=32% Similarity=0.620 Sum_probs=27.6
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
-.++|||||.+|+-+|..|++ + .+|.|+|++
T Consensus 27 yD~IIVGsG~AG~v~A~rLse-g--------------~~VlvLEaG 57 (536)
T 1ju2_A 27 YDYVIVGGGTSGCPLAATLSE-K--------------YKVLVLERG 57 (536)
T ss_dssp EEEEEECCSTTHHHHHHHHTT-T--------------SCEEEECSS
T ss_pred ccEEEECccHHHHHHHHHHhc-C--------------CcEEEEecC
Confidence 479999999999999999998 5 788888876
No 314
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.18 E-value=0.068 Score=45.37 Aligned_cols=34 Identities=21% Similarity=0.306 Sum_probs=30.7
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+.++|+|||||.+|...|..|.+.+ .+|+++++.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~G--------------a~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTG--------------CKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGT--------------CEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCC--------------CEEEEEcCC
Confidence 4579999999999999999999887 999999874
No 315
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.16 E-value=0.08 Score=39.36 Aligned_cols=33 Identities=24% Similarity=0.225 Sum_probs=28.8
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.++|+|+|+|..|..+|..|...+ .+|+++++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g--------------~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMG--------------HEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--------------CCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 468999999999999999998876 788998764
No 316
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.13 E-value=0.092 Score=43.83 Aligned_cols=39 Identities=23% Similarity=0.224 Sum_probs=32.7
Q ss_pred HHcccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCC
Q 023375 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 61 (283)
Q Consensus 10 ~~~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~ 61 (283)
++-+.++|+|||+|..|.++|..|+..+- .+|++++...
T Consensus 27 ~~l~~~~VlVvG~Gg~G~~va~~La~~Gv-------------~~i~lvD~d~ 65 (249)
T 1jw9_B 27 EALKDSRVLIVGLGGLGCAASQYLASAGV-------------GNLTLLDFDT 65 (249)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHHHTC-------------SEEEEECCCB
T ss_pred HHHhCCeEEEEeeCHHHHHHHHHHHHcCC-------------CeEEEEcCCC
Confidence 34456899999999999999999998872 4899998864
No 317
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.02 E-value=0.1 Score=45.02 Aligned_cols=38 Identities=18% Similarity=0.250 Sum_probs=29.0
Q ss_pred HHHcccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCcc--EEEEEeCC
Q 023375 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI--HVTLIEAN 60 (283)
Q Consensus 9 ~~~~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~--~V~li~~~ 60 (283)
|+++...+|+|||+|..|.-+|..|+..+ . +|++++++
T Consensus 2 ~~~~~~mkI~IiGaG~vG~~~a~~l~~~g--------------~~~~V~l~d~~ 41 (319)
T 1lld_A 2 ETTVKPTKLAVIGAGAVGSTLAFAAAQRG--------------IAREIVLEDIA 41 (319)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTT--------------CCSEEEEECSS
T ss_pred CcCCCCCEEEEECCCHHHHHHHHHHHhCC--------------CCCEEEEEeCC
Confidence 34455679999999999999999998765 5 89999764
No 318
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=92.93 E-value=0.098 Score=44.81 Aligned_cols=40 Identities=23% Similarity=0.248 Sum_probs=33.4
Q ss_pred HHHcccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCC
Q 023375 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 61 (283)
Q Consensus 9 ~~~~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~ 61 (283)
+++-+..+|+|||.|-.|.++|..|+..+- .+++|++...
T Consensus 31 q~kL~~~~VlVvGaGGlGs~va~~La~aGV-------------G~i~lvD~D~ 70 (292)
T 3h8v_A 31 YEKIRTFAVAIVGVGGVGSVTAEMLTRCGI-------------GKLLLFDYDK 70 (292)
T ss_dssp -CGGGGCEEEEECCSHHHHHHHHHHHHHTC-------------SEEEEECCCB
T ss_pred HHHHhCCeEEEECcCHHHHHHHHHHHHcCC-------------CEEEEECCCc
Confidence 455577899999999999999999998873 6899998763
No 319
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.81 E-value=0.11 Score=40.81 Aligned_cols=75 Identities=17% Similarity=0.092 Sum_probs=48.0
Q ss_pred cCeEEEEccCcHHHHHHHHHHHh-hhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeCceEE
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDF-IMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKD 92 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~-~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~ 92 (283)
..+|+|+|.|..|..+|..|.+. + .+|++++++. +. .+.+.+.|++++.+..++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g--------------~~V~vid~~~-------~~----~~~~~~~g~~~~~gd~~~ 93 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG--------------KISLGIEIRE-------EA----AQQHRSEGRNVISGDATD 93 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC--------------SCEEEEESCH-------HH----HHHHHHTTCCEEECCTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC--------------CeEEEEECCH-------HH----HHHHHHCCCCEEEcCCCC
Confidence 45899999999999999999887 6 8899997642 11 123456687765431110
Q ss_pred EeCCeEEEcCC-cEEEeeEEEEcCCC
Q 023375 93 VDSQKLILNDG-TEVPYGLLVWSTGV 117 (283)
Q Consensus 93 v~~~~v~~~~g-~~i~~d~vi~a~G~ 117 (283)
. +. +..- ..-.+|.||.+++.
T Consensus 94 ~--~~--l~~~~~~~~ad~vi~~~~~ 115 (183)
T 3c85_A 94 P--DF--WERILDTGHVKLVLLAMPH 115 (183)
T ss_dssp H--HH--HHTBCSCCCCCEEEECCSS
T ss_pred H--HH--HHhccCCCCCCEEEEeCCC
Confidence 0 00 0000 01248999999875
No 320
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.73 E-value=0.059 Score=48.91 Aligned_cols=35 Identities=14% Similarity=0.158 Sum_probs=30.0
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 61 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~ 61 (283)
+.++|+|||.|.+|+.+|..|++.+ .+|+..+...
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G--------------~~v~~~D~~~ 38 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARG--------------VTPRVMDTRM 38 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTT--------------CCCEEEESSS
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCC--------------CEEEEEECCC
Confidence 3478999999999999998888877 8889888764
No 321
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=92.67 E-value=0.14 Score=46.30 Aligned_cols=45 Identities=16% Similarity=0.185 Sum_probs=36.1
Q ss_pred CCCCCHHHHc-ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 3 LAGISEEEKS-RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 3 ~~~~~~~~~~-~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.++....++. +..+|+|||+|-.|.++|..|+..+- .+++|++..
T Consensus 28 ~~g~e~~~~~L~~~~VlvvG~GGlGs~va~~La~aGv-------------g~i~ivD~D 73 (434)
T 1tt5_B 28 EPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGF-------------RQIHVIDMD 73 (434)
T ss_dssp CCCSSHHHHHHHTCCEEEECSSTHHHHHHHHHHHTTC-------------CCEEEEECC
T ss_pred ccCHHHHHHHhcCCEEEEECcCHHHHHHHHHHHHcCC-------------CEEEEEcCC
Confidence 4455555444 67899999999999999999998873 689999875
No 322
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=92.44 E-value=0.24 Score=42.80 Aligned_cols=80 Identities=18% Similarity=0.252 Sum_probs=47.7
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeCceEE
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKD 92 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~ 92 (283)
..++|+|||+|..|.-+|..|++.+ .+|+++ +. ++. .+.+++.|+.+.......
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G--------------~~V~l~-~~-------~~~----~~~i~~~g~~~~~~~~~~ 71 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAG--------------HEVILI-AR-------PQH----VQAIEATGLRLETQSFDE 71 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTT--------------CEEEEE-CC-------HHH----HHHHHHHCEEEECSSCEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCC--------------CeEEEE-Ec-------HhH----HHHHHhCCeEEEcCCCcE
Confidence 4578999999999999999999876 899998 42 111 233455576665321111
Q ss_pred EeCCeEEEcCCcE-EEeeEEEEcCCCCC
Q 023375 93 VDSQKLILNDGTE-VPYGLLVWSTGVGP 119 (283)
Q Consensus 93 v~~~~v~~~~g~~-i~~d~vi~a~G~~~ 119 (283)
-..-.+ ..+-+. -++|.||+|+....
T Consensus 72 ~~~~~~-~~~~~~~~~~D~vilavk~~~ 98 (318)
T 3hwr_A 72 QVKVSA-SSDPSAVQGADLVLFCVKSTD 98 (318)
T ss_dssp EECCEE-ESCGGGGTTCSEEEECCCGGG
T ss_pred EEeeee-eCCHHHcCCCCEEEEEccccc
Confidence 001011 112111 25899999987653
No 323
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=92.41 E-value=0.18 Score=44.05 Aligned_cols=45 Identities=16% Similarity=0.309 Sum_probs=37.1
Q ss_pred CCCCCCHHHHcccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 2 FLAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 2 ~~~~~~~~~~~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.+|..+.+ +-+..+|+|||+|-.|.++|..|+..+- .++++++..
T Consensus 23 ll~~~g~~-kL~~~~VlIvGaGGlGs~va~~La~aGV-------------g~ItlvD~D 67 (340)
T 3rui_A 23 ILPDLNLD-IIKNTKVLLLGAGTLGCYVSRALIAWGV-------------RKITFVDNG 67 (340)
T ss_dssp TCTTCCHH-HHHTCEEEEECCSHHHHHHHHHHHHTTC-------------CEEEEECCC
T ss_pred hcchhhHH-HHhCCEEEEECCCHHHHHHHHHHHHcCC-------------CEEEEecCC
Confidence 35666665 5566899999999999999999999873 689999875
No 324
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.15 E-value=0.32 Score=42.20 Aligned_cols=76 Identities=14% Similarity=0.190 Sum_probs=48.4
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEE
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDV 93 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v 93 (283)
.++|.|||+|..|.-+|..|++.+ .+|+++.+. +. .+.+++.|+.+........
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g--------------~~V~~~~r~-------~~-----~~~~~~~g~~~~~~~~~~~ 56 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAG--------------EAINVLARG-------AT-----LQALQTAGLRLTEDGATHT 56 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTT--------------CCEEEECCH-------HH-----HHHHHHTCEEEEETTEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC--------------CEEEEEECh-------HH-----HHHHHHCCCEEecCCCeEE
Confidence 368999999999999999999876 789999542 11 2346677887754311111
Q ss_pred eCCeEEE-cCCcE-EEeeEEEEcCCC
Q 023375 94 DSQKLIL-NDGTE-VPYGLLVWSTGV 117 (283)
Q Consensus 94 ~~~~v~~-~~g~~-i~~d~vi~a~G~ 117 (283)
.. +.. .+-+. -++|.||+|+..
T Consensus 57 ~~--~~~~~~~~~~~~~D~Vilavk~ 80 (335)
T 3ghy_A 57 LP--VRATHDAAALGEQDVVIVAVKA 80 (335)
T ss_dssp EC--CEEESCHHHHCCCSEEEECCCH
T ss_pred Ee--eeEECCHHHcCCCCEEEEeCCc
Confidence 11 111 12111 258999998865
No 325
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=92.05 E-value=0.35 Score=44.11 Aligned_cols=50 Identities=18% Similarity=0.223 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHhCC-CEEEeC-ceEEEeCC----eEEEcCCcEEEeeEEEEcCCCC
Q 023375 69 RLRHYATTQLSKSG-VRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGVG 118 (283)
Q Consensus 69 ~~~~~~~~~l~~~g-V~v~~~-~V~~v~~~----~v~~~~g~~i~~d~vi~a~G~~ 118 (283)
.+.+.+.+.+.+.| ++++++ +|++|+.+ .|++.+|+++.+|.||+|+|..
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHH
Confidence 56666777788888 999999 89999632 3566788889999999999963
No 326
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=92.04 E-value=0.13 Score=49.62 Aligned_cols=42 Identities=26% Similarity=0.351 Sum_probs=31.2
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 61 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~ 61 (283)
.++|+|||||.+|+.+|..|.+.+.. ++. ....+|+|+|+..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~-----~~~-~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAAT-----LPA-GSGIDVQIYEADP 97 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTT-----SCT-TCEEEEEEECCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcc-----ccc-CCCceEEEEeccC
Confidence 46899999999999999999976521 000 1127899999864
No 327
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=92.01 E-value=0.17 Score=36.07 Aligned_cols=34 Identities=24% Similarity=0.264 Sum_probs=28.3
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.++|+|+|+|..|..++..|...+. .+|++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~-------------~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSN-------------YSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSS-------------EEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCC-------------ceEEEEeCC
Confidence 3689999999999999999987641 688888764
No 328
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=91.84 E-value=0.13 Score=41.66 Aligned_cols=77 Identities=16% Similarity=0.195 Sum_probs=48.3
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEe
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVD 94 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v~ 94 (283)
++|+|+|+|..|..+|..|.+.+ .+|++++++ ++. +.+..++.|+.++.+..++.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g--------------~~v~vid~~-------~~~---~~~l~~~~~~~~i~gd~~~~- 55 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRK--------------YGVVIINKD-------REL---CEEFAKKLKATIIHGDGSHK- 55 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTT--------------CCEEEEESC-------HHH---HHHHHHHSSSEEEESCTTSH-
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--------------CeEEEEECC-------HHH---HHHHHHHcCCeEEEcCCCCH-
Confidence 37999999999999999999876 899999764 221 12222345777765521110
Q ss_pred CCeEEEcCCcEEEeeEEEEcCCCCC
Q 023375 95 SQKLILNDGTEVPYGLLVWSTGVGP 119 (283)
Q Consensus 95 ~~~v~~~~g~~i~~d~vi~a~G~~~ 119 (283)
+. +..-..-.+|.+|.+++...
T Consensus 56 -~~--l~~a~i~~ad~vi~~~~~d~ 77 (218)
T 3l4b_C 56 -EI--LRDAEVSKNDVVVILTPRDE 77 (218)
T ss_dssp -HH--HHHHTCCTTCEEEECCSCHH
T ss_pred -HH--HHhcCcccCCEEEEecCCcH
Confidence 00 00000124899999998643
No 329
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=91.60 E-value=0.36 Score=42.90 Aligned_cols=23 Identities=30% Similarity=0.404 Sum_probs=21.2
Q ss_pred CeEEEEccCcHHHHHHHHHHHhh
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFI 37 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~ 37 (283)
++|+|||||.+|+.+|..|++.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G 23 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAG 23 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTT
T ss_pred CcEEEECCCHHHHHHHHHHHhCC
Confidence 37999999999999999999876
No 330
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=91.51 E-value=0.15 Score=47.69 Aligned_cols=48 Identities=15% Similarity=0.127 Sum_probs=40.0
Q ss_pred ccccCCCcccCCCCCEEEeccccccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 135 RIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 135 ~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
+|.+|+++++.+.+++|++||++-+ ..-...|..+|-.+|+.|...+.
T Consensus 496 ri~~~~~~~~~~~~gly~~GegaG~---------a~gi~~Aa~~G~~~a~~i~~~~~ 543 (549)
T 3nlc_A 496 CIKRGKDFQSVNLKGFYPAGEGAGY---------AGGILSAGIDGIKVAEAVARDIV 543 (549)
T ss_dssp ECCCTTTTSCTTCBTEEECHHHHTS---------CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEECCCceECCcCCEEEccccCCh---------hhHHHHHHHHHHHHHHHHHHHhh
Confidence 4788999998889999999999954 44566788899999999887764
No 331
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=91.25 E-value=0.12 Score=48.66 Aligned_cols=33 Identities=33% Similarity=0.631 Sum_probs=29.0
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
-.+||||||.+|+-+|..|++.. ..+|.|||++
T Consensus 7 yDyIVVGgG~AG~v~A~rLse~~-------------~~~VLllEaG 39 (577)
T 3q9t_A 7 FDFVIVGGGTAGNTVAGRLAENP-------------NVTVLIVEAG 39 (577)
T ss_dssp EEEEEESCSHHHHHHHHHHTTST-------------TSCEEEECSS
T ss_pred ccEEEECCcHHHHHHHHHHHhCC-------------CCcEEEEecC
Confidence 47999999999999999999764 2799999997
No 332
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=91.21 E-value=0.17 Score=46.64 Aligned_cols=32 Identities=19% Similarity=0.254 Sum_probs=28.0
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..++|||+|++|+-+|..|++.+ .+|.++|++
T Consensus 6 ~d~~iiG~G~~g~~~a~~l~~~~--------------~~v~~~e~~ 37 (504)
T 1n4w_A 6 VPAVVIGTGYGAAVSALRLGEAG--------------VQTLMLEMG 37 (504)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CcEEEEeCC
Confidence 47999999999999999999865 788888765
No 333
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=91.21 E-value=0.26 Score=43.30 Aligned_cols=40 Identities=23% Similarity=0.302 Sum_probs=34.3
Q ss_pred HHHcccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCC
Q 023375 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 61 (283)
Q Consensus 9 ~~~~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~ 61 (283)
+++-+..+|+|||.|..|.++|..|+..+- .+++|++...
T Consensus 113 q~~L~~~~VlvvG~GglGs~va~~La~aGv-------------g~i~lvD~D~ 152 (353)
T 3h5n_A 113 QDKLKNAKVVILGCGGIGNHVSVILATSGI-------------GEIILIDNDQ 152 (353)
T ss_dssp HHHHHTCEEEEECCSHHHHHHHHHHHHHTC-------------SEEEEEECCB
T ss_pred HHHHhCCeEEEECCCHHHHHHHHHHHhCCC-------------CeEEEECCCc
Confidence 556677899999999999999999998873 6899998763
No 334
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.11 E-value=0.25 Score=45.11 Aligned_cols=33 Identities=15% Similarity=0.395 Sum_probs=29.6
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.++|+|+|+|-.|..+|..|...+ .+|++|+.+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~--------------~~v~vId~d 35 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGEN--------------NDITIVDKD 35 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTT--------------EEEEEEESC
T ss_pred cCEEEEECCCHHHHHHHHHHHHCC--------------CCEEEEECC
Confidence 468999999999999999998766 999999875
No 335
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=91.04 E-value=0.37 Score=44.16 Aligned_cols=51 Identities=10% Similarity=-0.001 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHhCCCEEEeC-ceEEEeC--C----eEEEcCCcEEEeeEEEEcCCCC
Q 023375 68 DRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q----KLILNDGTEVPYGLLVWSTGVG 118 (283)
Q Consensus 68 ~~~~~~~~~~l~~~gV~v~~~-~V~~v~~--~----~v~~~~g~~i~~d~vi~a~G~~ 118 (283)
.++.+.+.+.+++.|++++++ +|++|.. + +|++.+|+++.||.||.+++..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 467888888899999999999 8998853 2 4778889999999999999987
No 336
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=91.03 E-value=0.081 Score=45.30 Aligned_cols=47 Identities=17% Similarity=0.361 Sum_probs=32.9
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHH
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLS 79 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~ 79 (283)
.++++|+|||||..|+ |.++.+... ..+|+++ .+++.+.+..++.|.
T Consensus 82 p~pk~VLIiGgGdG~~--~revlk~~~------------v~~v~~V-------EID~~Vv~~a~~~lp 128 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAM--LREVTRHKN------------VESITMV-------EIDAGVVSFCRQYLP 128 (294)
T ss_dssp SCCCEEEEESCTTSHH--HHHHHTCTT------------CCEEEEE-------ESCHHHHHHHHHHCH
T ss_pred CCCCeEEEECCCchHH--HHHHHHcCC------------cceEEEE-------cCCHHHHHHHHhcCc
Confidence 4678999999998875 556654421 2789999 456666666666654
No 337
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=90.97 E-value=0.18 Score=46.63 Aligned_cols=32 Identities=22% Similarity=0.316 Sum_probs=27.5
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..++|||+|++|+-+|..|++.+ .+|.++|++
T Consensus 12 ~d~~iiG~G~~g~~~a~~l~~~~--------------~~v~~~e~~ 43 (507)
T 1coy_A 12 VPALVIGSGYGGAVAALRLTQAG--------------IPTQIVEMG 43 (507)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CcEEEEECC
Confidence 57999999999999999999865 677777764
No 338
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=90.89 E-value=0.36 Score=42.26 Aligned_cols=33 Identities=24% Similarity=0.284 Sum_probs=29.6
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.|+|+|+|||..|.++|..+.+++ .+|++++.+
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G--------------~~vv~vd~~ 33 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAG--------------MKVVLVDKN 33 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 479999999999999999998887 899999875
No 339
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=90.88 E-value=0.14 Score=48.31 Aligned_cols=35 Identities=29% Similarity=0.505 Sum_probs=29.7
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 61 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~ 61 (283)
.-.+||||||.+|+-+|..|++.. ..+|.|||++.
T Consensus 19 ~yDyIIVGgG~AG~vlA~RLse~~-------------~~~VLlLEaG~ 53 (583)
T 3qvp_A 19 TVDYIIAGGGLTGLTTAARLTENP-------------NISVLVIESGS 53 (583)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTST-------------TCCEEEECSSC
T ss_pred CccEEEECCcHHHHHHHHHHHhCC-------------CCcEEEEecCC
Confidence 358999999999999999998642 28999999864
No 340
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=90.73 E-value=0.31 Score=45.83 Aligned_cols=46 Identities=15% Similarity=0.302 Sum_probs=37.6
Q ss_pred CCCCCCHHHHcccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCC
Q 023375 2 FLAGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 61 (283)
Q Consensus 2 ~~~~~~~~~~~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~ 61 (283)
++|..+.+ +-+..+|+|||+|-.|.++|..|+..+- .+++|++...
T Consensus 315 llp~~g~e-kL~~arVLIVGaGGLGs~vA~~La~aGV-------------G~ItLvD~D~ 360 (615)
T 4gsl_A 315 ILPDLNLD-IIKNTKVLLLGAGTLGCYVSRALIAWGV-------------RKITFVDNGT 360 (615)
T ss_dssp TCTTCCHH-HHHTCEEEEECCSHHHHHHHHHHHHTTC-------------CEEEEECCCB
T ss_pred hcchhhHH-HHhCCeEEEECCCHHHHHHHHHHHHcCC-------------CEEEEEcCCC
Confidence 35666665 4556799999999999999999999873 6899998864
No 341
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=90.72 E-value=0.27 Score=41.02 Aligned_cols=38 Identities=16% Similarity=0.109 Sum_probs=32.4
Q ss_pred HHcccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 10 ~~~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
++-+..+|+|||.|-.|.++|..|+..+- .+++|++..
T Consensus 24 ~~l~~~~VlvvG~GglG~~va~~La~~Gv-------------g~i~lvD~d 61 (251)
T 1zud_1 24 QKLLDSQVLIIGLGGLGTPAALYLAGAGV-------------GTLVLADDD 61 (251)
T ss_dssp HHHHTCEEEEECCSTTHHHHHHHHHHTTC-------------SEEEEECCC
T ss_pred HHHhcCcEEEEccCHHHHHHHHHHHHcCC-------------CeEEEEeCC
Confidence 45566899999999999999999998872 589999775
No 342
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=90.62 E-value=0.31 Score=39.63 Aligned_cols=78 Identities=19% Similarity=0.227 Sum_probs=50.6
Q ss_pred HHcccCeEEEEcc-CcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCC-EEEe
Q 023375 10 EKSRLLHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGV-RLVR 87 (283)
Q Consensus 10 ~~~~~~~vvVvGg-G~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV-~v~~ 87 (283)
..-+.++|+|.|| |.+|-++|.+|.+.+ .+|+++.+..- .+ +.+...++ +++.
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G--------------~~V~~~~R~~~------~~-----~~~~~~~~~~~~~ 71 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKG--------------HEPVAMVRNEE------QG-----PELRERGASDIVV 71 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTT--------------CEEEEEESSGG------GH-----HHHHHTTCSEEEE
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCC--------------CeEEEEECChH------HH-----HHHHhCCCceEEE
Confidence 3456789999997 999999999999877 89999987521 11 22444578 7775
Q ss_pred CceEEEeCCeEEEcCCcEEEeeEEEEcCCCCC
Q 023375 88 GIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119 (283)
Q Consensus 88 ~~V~~v~~~~v~~~~g~~i~~d~vi~a~G~~~ 119 (283)
..+. +.+.-.-+ .+|.||.++|...
T Consensus 72 ~Dl~----~~~~~~~~---~~D~vi~~ag~~~ 96 (236)
T 3e8x_A 72 ANLE----EDFSHAFA---SIDAVVFAAGSGP 96 (236)
T ss_dssp CCTT----SCCGGGGT---TCSEEEECCCCCT
T ss_pred cccH----HHHHHHHc---CCCEEEECCCCCC
Confidence 5332 11110001 3899999999765
No 343
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=90.36 E-value=0.41 Score=43.39 Aligned_cols=61 Identities=16% Similarity=0.136 Sum_probs=46.1
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-C--------CCCCCCHHHHHHHHHHHHhCCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-E--------ILSSFDDRLRHYATTQLSKSGV 83 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~--------~l~~~~~~~~~~~~~~l~~~gV 83 (283)
+..+|.|||.|+.|+-+|..|++.+ .+|+.++-+ + ..|-..+.+.+.+.+.+...++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G--------------~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l 85 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLG--------------HRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRL 85 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHT--------------CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCE
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCC--------------CcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCe
Confidence 5579999999999999999999987 899999764 1 2344566666666676666655
Q ss_pred EEEe
Q 023375 84 RLVR 87 (283)
Q Consensus 84 ~v~~ 87 (283)
.+-+
T Consensus 86 ~~tt 89 (444)
T 3vtf_A 86 SFAE 89 (444)
T ss_dssp EECS
T ss_pred eEEc
Confidence 5544
No 344
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=90.30 E-value=0.22 Score=43.70 Aligned_cols=64 Identities=16% Similarity=0.191 Sum_probs=44.7
Q ss_pred HHHcccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCC---------C---CCCCHHHHHHHHH
Q 023375 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI---------L---SSFDDRLRHYATT 76 (283)
Q Consensus 9 ~~~~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~---------l---~~~~~~~~~~~~~ 76 (283)
+++-+..+|+|||.|.+|.|+|..|+..+- .+++|++...+ + ..++..-.+.+.+
T Consensus 31 q~~L~~~~VlivG~GGlG~~ia~~La~~Gv-------------g~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~ 97 (346)
T 1y8q_A 31 QKRLRASRVLLVGLKGLGAEIAKNLILAGV-------------KGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLE 97 (346)
T ss_dssp HHHHHTCEEEEECCSHHHHHHHHHHHHHTC-------------SEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHH
T ss_pred HHHHhCCeEEEECCCHHHHHHHHHHHHcCC-------------CEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHH
Confidence 345567899999999999999999998872 59999976422 1 1223334556666
Q ss_pred HHHhCC--CEE
Q 023375 77 QLSKSG--VRL 85 (283)
Q Consensus 77 ~l~~~g--V~v 85 (283)
.|.+.+ |++
T Consensus 98 ~l~~lnp~v~v 108 (346)
T 1y8q_A 98 RAQNLNPMVDV 108 (346)
T ss_dssp HHHHTCTTSEE
T ss_pred HHHhHCCCeEE
Confidence 777653 544
No 345
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=90.28 E-value=0.27 Score=44.85 Aligned_cols=22 Identities=32% Similarity=0.709 Sum_probs=20.1
Q ss_pred CeEEEEccCcHHHHHHHHHHHh
Q 023375 15 LHCVVVGGGPTGVEFSGELSDF 36 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~ 36 (283)
..|+|||||++|+.+|..|++.
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~ 32 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQI 32 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhh
Confidence 5799999999999999999874
No 346
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=90.26 E-value=0.14 Score=44.42 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=29.7
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..+|+|||+|..|..+|..++..+ .+|++++.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G--------------~~V~l~D~~ 38 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGG--------------FRVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSC
T ss_pred CCeEEEECCcHHHHHHHHHHHhCC--------------CeEEEEECC
Confidence 468999999999999999999887 999999875
No 347
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=90.24 E-value=0.22 Score=46.97 Aligned_cols=33 Identities=30% Similarity=0.551 Sum_probs=27.6
Q ss_pred cCeEEEEccCcHHHHHHHHHHH-hhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSD-FIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~-~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.-.++|||+|.+|+-+|..|++ .+ .+|.++|++
T Consensus 24 ~~d~iivG~G~~g~~~a~~l~~~~~--------------~~v~~~e~g 57 (587)
T 1gpe_A 24 TYDYIIAGGGLTGLTVAAKLTENPK--------------IKVLVIEKG 57 (587)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTT--------------CCEEEEESS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCC--------------CcEEEEecC
Confidence 3589999999999999999997 44 677777764
No 348
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=90.20 E-value=0.28 Score=48.04 Aligned_cols=46 Identities=15% Similarity=0.180 Sum_probs=36.9
Q ss_pred CCCCCHHHHc-ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCC
Q 023375 3 LAGISEEEKS-RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 61 (283)
Q Consensus 3 ~~~~~~~~~~-~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~ 61 (283)
.++.+..++. +..+|+|||.|-.|.++|..|+..+- .+++|++...
T Consensus 399 ~~g~~~~~~~l~~~~vlvvG~GglG~~~~~~L~~~Gv-------------g~i~l~D~d~ 445 (805)
T 2nvu_B 399 EPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGF-------------RQIHVIDMDT 445 (805)
T ss_dssp CCCSHHHHHHHHTCCEEEECCSSHHHHHHHHHHTTTC-------------CEEEEEECCB
T ss_pred CCCHHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCC-------------CcEEEECCCe
Confidence 3444455555 77899999999999999999998872 6999998863
No 349
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=90.14 E-value=0.13 Score=48.28 Aligned_cols=32 Identities=31% Similarity=0.443 Sum_probs=27.6
Q ss_pred eEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 16 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 16 ~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.++|||||.+|+-+|..|++-. +.+|.|+|++
T Consensus 4 D~IIVG~G~aG~v~A~rLse~~-------------~~~VlllEaG 35 (566)
T 3fim_B 4 DYVVVGAGNAGNVVAARLTEDP-------------DVSVLVLEAG 35 (566)
T ss_dssp EEEESCCSTTHHHHHHHHTTST-------------TCCEEEECSS
T ss_pred CEEEECCcHHHHHHHHHHHhCc-------------CCcEEEEecC
Confidence 6899999999999999998721 2899999986
No 350
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=89.83 E-value=0.39 Score=45.34 Aligned_cols=57 Identities=21% Similarity=0.202 Sum_probs=38.5
Q ss_pred CCccccCCCcccCCCCCEEEeccccccCcCCCCcCCCc-chHHHHHHHHHHHHHHHHHhh
Q 023375 133 GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA-LAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 133 ~g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~~~~~~p~-~~~~A~~qg~~~a~~i~~~~~ 191 (283)
.|.|.||...|+ ..|++||+|+|+...- .|...+.. ....|.-.|+.+++++...+.
T Consensus 359 ~GGi~vd~~~~~-~IpGLyAaGe~a~~g~-hGanrl~gnsl~~~~vfGr~Ag~~aa~~~~ 416 (602)
T 1kf6_A 359 MGGIETDQNCET-RIKGLFAVGECSSVGL-HGANRLGSNSLAELVVFGRLAGEQATERAA 416 (602)
T ss_dssp CCEEECCTTSBC-SSBTEEECGGGEECSS-STTSCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEECCCCcc-ccCCEEEccccccccc-cCCCCCccHHHHHHHHHHHHHHHHHHHhhh
Confidence 367899999999 8999999999974210 11111111 123466779999999877653
No 351
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=89.65 E-value=0.38 Score=43.84 Aligned_cols=73 Identities=22% Similarity=0.216 Sum_probs=48.3
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeCceEE
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKD 92 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~ 92 (283)
+.++|+|||||.+|...|..|.+.+ .+|+++++. ..+++ .+...+.+++++.+...
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~g--------------a~V~vi~~~-----~~~~~----~~l~~~~~i~~~~~~~~- 66 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAG--------------ARLTVNALT-----FIPQF----TVWANEGMLTLVEGPFD- 66 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTT--------------BEEEEEESS-----CCHHH----HHHHTTTSCEEEESSCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCc--------------CEEEEEcCC-----CCHHH----HHHHhcCCEEEEECCCC-
Confidence 4579999999999999999999887 899999863 22333 22233356777654211
Q ss_pred EeCCeEEEcCCcEEEeeEEEEcCCCC
Q 023375 93 VDSQKLILNDGTEVPYGLLVWSTGVG 118 (283)
Q Consensus 93 v~~~~v~~~~g~~i~~d~vi~a~G~~ 118 (283)
++.+ -.+|.||.+||..
T Consensus 67 --~~~l-------~~~~lVi~at~~~ 83 (457)
T 1pjq_A 67 --ETLL-------DSCWLAIAATDDD 83 (457)
T ss_dssp --GGGG-------TTCSEEEECCSCH
T ss_pred --cccc-------CCccEEEEcCCCH
Confidence 0000 1367788887765
No 352
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=89.57 E-value=0.2 Score=46.68 Aligned_cols=32 Identities=38% Similarity=0.681 Sum_probs=27.6
Q ss_pred CeEEEEccCcHHHHHHHHHHHh-hhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDF-IMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~-~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
-.++|||+|.+|+-+|..|++. + .+|.++|++
T Consensus 14 ~d~~ivG~G~~G~~~a~~l~~~~~--------------~~v~~~e~g 46 (546)
T 2jbv_A 14 FDYIVVGGGSAGAAVAARLSEDPA--------------VSVALVEAG 46 (546)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTT--------------SCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCC--------------CCEEEEecC
Confidence 5899999999999999999875 3 678888775
No 353
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=89.44 E-value=0.36 Score=43.09 Aligned_cols=47 Identities=13% Similarity=-0.002 Sum_probs=38.1
Q ss_pred ccC-CCcccCCCCCEEEeccccccCcCCCCcCCCcchHHHHHHHHHHHHHHH
Q 023375 137 GID-EWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLN 187 (283)
Q Consensus 137 ~Vd-~~l~~~~~~~VfaiGD~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~ 187 (283)
.+| ++|+++..|++|++|++.++..+.|+ -.-|.|...|..|++++.
T Consensus 352 ~~~~~tmes~~~~gly~~GE~ldv~g~~GG----ynlq~a~~sg~~ag~~~~ 399 (401)
T 2gqf_A 352 VISSKTMESNQVSGLYFIGEVLDVTGWLGG----YNFQWAWSSAYACALSIS 399 (401)
T ss_dssp GBCTTTCBBSSSTTEEECGGGBSCEECTTT----HHHHHHHHHHHHHHHHHH
T ss_pred cCChhhccccCCCCEEEEEEeEEeccCCCC----HHHHHHHHHHHHHHHHHh
Confidence 367 78998899999999999997655553 356789999999998874
No 354
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=89.42 E-value=0.38 Score=40.65 Aligned_cols=33 Identities=21% Similarity=0.238 Sum_probs=29.8
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.++|.|||+|..|..+|..++..+ .+|++++++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G--------------~~V~l~d~~ 36 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHG--------------FAVTAYDIN 36 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--------------CeEEEEeCC
Confidence 468999999999999999999887 899999775
No 355
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=88.99 E-value=0.35 Score=41.74 Aligned_cols=40 Identities=18% Similarity=0.054 Sum_probs=28.0
Q ss_pred CHHHHcccCeEEEEcc-CcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 7 SEEEKSRLLHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 7 ~~~~~~~~~~vvVvGg-G~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.+++..+.++|+|.|| |++|-.++..|.+.+ .+|+++.+.
T Consensus 12 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G--------------~~V~~~~r~ 52 (347)
T 4id9_A 12 SGLVPRGSHMILVTGSAGRVGRAVVAALRTQG--------------RTVRGFDLR 52 (347)
T ss_dssp ---------CEEEETTTSHHHHHHHHHHHHTT--------------CCEEEEESS
T ss_pred CcccccCCCEEEEECCCChHHHHHHHHHHhCC--------------CEEEEEeCC
Confidence 3445567789999997 999999999999876 788888775
No 356
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=88.99 E-value=0.41 Score=44.93 Aligned_cols=43 Identities=14% Similarity=0.285 Sum_probs=34.8
Q ss_pred CCCCHHHHcccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 4 AGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 4 ~~~~~~~~~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
|+.+. ++-+..+|+|||+|-.|.++|..|+..+- .+++|++..
T Consensus 318 ~~~gq-~kL~~~kVLIVGaGGLGs~va~~La~aGV-------------G~ItLvD~D 360 (598)
T 3vh1_A 318 PDLNL-DIIKNTKVLLLGAGTLGCYVSRALIAWGV-------------RKITFVDNG 360 (598)
T ss_dssp TTCCH-HHHHTCEEEEECCSHHHHHHHHHHHTTTC-------------CEEEEECCS
T ss_pred chhhH-HHHhCCeEEEECCCHHHHHHHHHHHHcCC-------------CEEEEECCC
Confidence 44443 45566899999999999999999998873 689999775
No 357
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=88.91 E-value=0.43 Score=40.95 Aligned_cols=37 Identities=22% Similarity=0.196 Sum_probs=31.9
Q ss_pred HHcccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 10 EKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 10 ~~~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+..+.++|.|||.|..|..+|..|++.+ .+|+++++.
T Consensus 17 ~~~~m~~I~iIG~G~mG~~~A~~l~~~G--------------~~V~~~dr~ 53 (310)
T 3doj_A 17 RGSHMMEVGFLGLGIMGKAMSMNLLKNG--------------FKVTVWNRT 53 (310)
T ss_dssp -CCCSCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred ccccCCEEEEECccHHHHHHHHHHHHCC--------------CeEEEEeCC
Confidence 3456689999999999999999999887 899999775
No 358
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=88.73 E-value=0.3 Score=46.32 Aligned_cols=41 Identities=27% Similarity=0.273 Sum_probs=34.3
Q ss_pred HHHHcccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCC
Q 023375 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 61 (283)
Q Consensus 8 ~~~~~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~ 61 (283)
.+++-+..+|+|||.|..|.++|..|+..+- .+++|++...
T Consensus 11 ~Q~kL~~s~VlVVGaGGLGsevak~La~aGV-------------G~ItlvD~D~ 51 (640)
T 1y8q_B 11 LAEAVAGGRVLVVGAGGIGCELLKNLVLTGF-------------SHIDLIDLDT 51 (640)
T ss_dssp HHHHHHHCEEEEECCSHHHHHHHHHHHHHTC-------------CEEEEEECCB
T ss_pred HHHHHhcCeEEEECcCHHHHHHHHHHHHcCC-------------CeEEEecCCE
Confidence 3455567899999999999999999998873 6999998763
No 359
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=88.51 E-value=0.23 Score=37.34 Aligned_cols=35 Identities=23% Similarity=0.142 Sum_probs=29.0
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
...++|+|||+|..|..+|..|...+ .+|+++++.
T Consensus 19 ~~~~~v~iiG~G~iG~~~a~~l~~~g--------------~~v~v~~r~ 53 (144)
T 3oj0_A 19 NGGNKILLVGNGMLASEIAPYFSYPQ--------------YKVTVAGRN 53 (144)
T ss_dssp HCCCEEEEECCSHHHHHHGGGCCTTT--------------CEEEEEESC
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCC--------------CEEEEEcCC
Confidence 44789999999999999999887755 678888764
No 360
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=88.46 E-value=0.49 Score=40.30 Aligned_cols=33 Identities=24% Similarity=0.386 Sum_probs=29.7
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.++|.|||+|..|..+|..|+..+ .+|++++++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G--------------~~V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATG--------------HTVVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--------------CeEEEEECC
Confidence 468999999999999999999876 899999775
No 361
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=88.03 E-value=0.59 Score=42.81 Aligned_cols=37 Identities=22% Similarity=0.236 Sum_probs=32.7
Q ss_pred HHcccCeEEEEccCcHHHHHHHHHHHh-hhhHHHhhcCCCCCcc-EEEEEeCC
Q 023375 10 EKSRLLHCVVVGGGPTGVEFSGELSDF-IMRDVRQRYSHVKDYI-HVTLIEAN 60 (283)
Q Consensus 10 ~~~~~~~vvVvGgG~~Gve~A~~L~~~-~~~~~~~~~~~~~~~~-~V~li~~~ 60 (283)
++...++|.|||.|..|.-+|..|++. + . +|++++.+
T Consensus 14 ~~~~~mkIaVIGlG~mG~~lA~~la~~~G--------------~~~V~~~D~~ 52 (478)
T 3g79_A 14 ERGPIKKIGVLGMGYVGIPAAVLFADAPC--------------FEKVLGFQRN 52 (478)
T ss_dssp HHCSCCEEEEECCSTTHHHHHHHHHHSTT--------------CCEEEEECCC
T ss_pred hcCCCCEEEEECcCHHHHHHHHHHHHhCC--------------CCeEEEEECC
Confidence 445667999999999999999999988 7 8 99999876
No 362
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=87.56 E-value=0.6 Score=39.60 Aligned_cols=32 Identities=25% Similarity=0.276 Sum_probs=28.5
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.+|.|||+|..|..+|..|++.+ .+|++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g--------------~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGG--------------NDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCC--------------CcEEEEECC
Confidence 58999999999999999999876 899999664
No 363
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=87.54 E-value=0.71 Score=38.06 Aligned_cols=36 Identities=25% Similarity=0.344 Sum_probs=30.1
Q ss_pred HcccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 11 ~~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
....++|.|||.|..|..+|..|++.+ .+|+++++.
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~~L~~~G--------------~~V~~~~r~ 51 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAGALADLG--------------HEVTIGTRD 51 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 345689999999999999999999876 899999875
No 364
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=87.41 E-value=0.67 Score=37.24 Aligned_cols=35 Identities=14% Similarity=0.119 Sum_probs=28.8
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
...++|.|||+|..|..+|..|++.+ .+|++++++
T Consensus 17 ~~~~~I~iiG~G~mG~~la~~l~~~g--------------~~V~~~~~~ 51 (209)
T 2raf_A 17 FQGMEITIFGKGNMGQAIGHNFEIAG--------------HEVTYYGSK 51 (209)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECTT
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCC--------------CEEEEEcCC
Confidence 34568999999999999999999876 789988765
No 365
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=87.37 E-value=0.66 Score=40.30 Aligned_cols=33 Identities=15% Similarity=0.106 Sum_probs=28.8
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCcc-EEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~-~V~li~~~ 60 (283)
..+|+|||+|..|..+|..|+..+ . +|+|++.+
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g--------------~~~V~L~D~~ 42 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRE--------------LADVVLYDVV 42 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHT--------------CCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--------------CCeEEEEECC
Confidence 468999999999999999999765 5 89999876
No 366
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=87.36 E-value=0.63 Score=39.00 Aligned_cols=31 Identities=19% Similarity=0.055 Sum_probs=28.1
Q ss_pred eEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 16 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 16 ~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+|.|||+|..|..+|..|++.+ .+|++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g--------------~~V~~~~r~ 32 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQG--------------HEVQGWLRV 32 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred eEEEECcCHHHHHHHHHHHhCC--------------CCEEEEEcC
Confidence 7999999999999999999876 789999875
No 367
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=87.13 E-value=0.69 Score=41.02 Aligned_cols=34 Identities=15% Similarity=0.175 Sum_probs=30.2
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
...+|+|+|+|.+|..+|..+..++ .+|+++++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lG--------------a~V~v~D~~ 216 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLG--------------AKTTGYDVR 216 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHT--------------CEEEEECSS
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 4579999999999999999999887 899999765
No 368
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=87.11 E-value=0.45 Score=47.66 Aligned_cols=45 Identities=13% Similarity=0.158 Sum_probs=34.3
Q ss_pred HHHcccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCC
Q 023375 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 61 (283)
Q Consensus 9 ~~~~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~ 61 (283)
+++-+..+|+|||+|..|.|+|..|+..+-. ..++.+|+|++...
T Consensus 420 q~kL~~~~VlvVGaGGlGsevlk~La~~Gv~--------~g~~G~i~lvD~D~ 464 (1015)
T 3cmm_A 420 QKKIANSKVFLVGSGAIGCEMLKNWALLGLG--------SGSDGYIVVTDNDS 464 (1015)
T ss_dssp HHHHHTCEEEEECCSHHHHHHHHHHHHHTTT--------CSTTCEEEEECCCB
T ss_pred HHHHhcCeEEEEecCHHHHHHHHHHHHcCcC--------cCCCCeEEEEeCCE
Confidence 3455678999999999999999999998720 01124999998753
No 369
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=87.08 E-value=0.69 Score=39.83 Aligned_cols=36 Identities=11% Similarity=0.188 Sum_probs=30.6
Q ss_pred HcccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 11 ~~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+...++|.|||.|..|..+|..|++.+ .+|+++++.
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l~~~G--------------~~V~~~dr~ 63 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRLCEAG--------------YALQVWNRT 63 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred ccCCCEEEEECccHHHHHHHHHHHhCC--------------CeEEEEcCC
Confidence 345579999999999999999999877 899999764
No 370
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=86.96 E-value=0.5 Score=43.05 Aligned_cols=35 Identities=20% Similarity=0.233 Sum_probs=31.5
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+..++|.|||+|..|..+|..++..+ .+|++++.+
T Consensus 52 ~~i~kVaVIGaG~MG~~IA~~la~aG--------------~~V~l~D~~ 86 (460)
T 3k6j_A 52 YDVNSVAIIGGGTMGKAMAICFGLAG--------------IETFLVVRN 86 (460)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCC--------------CeEEEEECc
Confidence 45579999999999999999999887 999999876
No 371
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=86.96 E-value=0.65 Score=38.83 Aligned_cols=33 Identities=24% Similarity=0.319 Sum_probs=29.5
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.++|+|.|+|++|-.++..|.+.+ .+|+.+.+.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g--------------~~V~~~~r~ 35 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQG--------------HEVTGLRRS 35 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 468999999999999999999876 889999876
No 372
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=86.86 E-value=0.66 Score=37.47 Aligned_cols=34 Identities=15% Similarity=0.124 Sum_probs=28.1
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..++|.|||+|..|..+|..|.+.+ .+|++++++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g--------------~~V~~~~r~ 60 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSG--------------FKVVVGSRN 60 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESS
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 3468999999999999999998766 788888764
No 373
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=86.72 E-value=0.7 Score=38.56 Aligned_cols=70 Identities=17% Similarity=0.021 Sum_probs=49.6
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEe
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVD 94 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v~ 94 (283)
++|+|.|+|++|-.++..|.+.+ .+|+.+.+..- . .+.+...+++++...+.+++
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g--------------~~V~~~~r~~~------~-----~~~~~~~~~~~~~~D~~d~~ 60 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQG--------------WRIIGTSRNPD------Q-----MEAIRASGAEPLLWPGEEPS 60 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGT--------------CEEEEEESCGG------G-----HHHHHHTTEEEEESSSSCCC
T ss_pred CcEEEECCcHHHHHHHHHHHHCC--------------CEEEEEEcChh------h-----hhhHhhCCCeEEEecccccc
Confidence 68999999999999999998876 89999987521 1 12344567887765333322
Q ss_pred CCeEEEcCCcEEEeeEEEEcCCCCC
Q 023375 95 SQKLILNDGTEVPYGLLVWSTGVGP 119 (283)
Q Consensus 95 ~~~v~~~~g~~i~~d~vi~a~G~~~ 119 (283)
+ -.+|.||.++|...
T Consensus 61 -----~-----~~~d~vi~~a~~~~ 75 (286)
T 3ius_A 61 -----L-----DGVTHLLISTAPDS 75 (286)
T ss_dssp -----C-----TTCCEEEECCCCBT
T ss_pred -----c-----CCCCEEEECCCccc
Confidence 1 13799999998654
No 374
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=86.53 E-value=0.56 Score=43.56 Aligned_cols=61 Identities=21% Similarity=0.212 Sum_probs=43.3
Q ss_pred HHHcccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCC---------C---CCCCHHHHHHHHH
Q 023375 9 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI---------L---SSFDDRLRHYATT 76 (283)
Q Consensus 9 ~~~~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~---------l---~~~~~~~~~~~~~ 76 (283)
+++-+..+|+|||.|..|.|+|..|+..+- .+++|++...+ + ..++..-.+.+.+
T Consensus 27 q~~L~~~~VlvvG~GGlGseiak~La~aGV-------------g~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~Ka~~a~~ 93 (531)
T 1tt5_A 27 QEALESAHVCLINATATGTEILKNLVLPGI-------------GSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAME 93 (531)
T ss_dssp HHHHHHCEEEEECCSHHHHHHHHHHHTTTC-------------SEEEEECCCBBCHHHHHHCTTCCGGGBTSBHHHHHHH
T ss_pred HHHHhcCeEEEECcCHHHHHHHHHHHHcCC-------------CeEEEEeCCEechhhcccCccCChhhcCcHHHHHHHH
Confidence 344566899999999999999999998873 68999987632 1 1123333455666
Q ss_pred HHHhCC
Q 023375 77 QLSKSG 82 (283)
Q Consensus 77 ~l~~~g 82 (283)
.+.+.+
T Consensus 94 ~l~~lN 99 (531)
T 1tt5_A 94 FLQELN 99 (531)
T ss_dssp HHHTTC
T ss_pred HHHHhC
Confidence 677664
No 375
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=86.48 E-value=0.58 Score=40.71 Aligned_cols=43 Identities=19% Similarity=0.173 Sum_probs=31.5
Q ss_pred CCHHHHcccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 6 ISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 6 ~~~~~~~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..+++.....+|+|||+|..|..+|..|+..+. ..+++|++..
T Consensus 11 ~~~~~~~~~~kV~ViGaG~vG~~~a~~l~~~~~------------~~el~L~Di~ 53 (331)
T 4aj2_A 11 LLKEEQVPQNKITVVGVGAVGMACAISILMKDL------------ADELALVDVI 53 (331)
T ss_dssp CCC---CCSSEEEEECCSHHHHHHHHHHHHTTC------------CSEEEEECSC
T ss_pred ccccccCCCCEEEEECCCHHHHHHHHHHHhCCC------------CceEEEEeCC
Confidence 344456777899999999999999999986541 1489999753
No 376
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=86.46 E-value=0.78 Score=41.03 Aligned_cols=34 Identities=15% Similarity=0.192 Sum_probs=30.1
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
...+|+|+|+|.+|..+|..+..++ .+|++++..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lG--------------a~V~v~D~~ 222 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLG--------------AVVSATDVR 222 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC--------------CEEEEEcCC
Confidence 4579999999999999999999887 899999765
No 377
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=86.41 E-value=0.65 Score=41.70 Aligned_cols=33 Identities=12% Similarity=0.165 Sum_probs=29.4
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..+|+|||.|..|..+|..|...+ .+|++|+.+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g--------------~~vvvId~d 36 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSG--------------VKMVVLDHD 36 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC--------------CCEEEEECC
Confidence 358999999999999999999876 899999765
No 378
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=86.24 E-value=0.78 Score=39.28 Aligned_cols=32 Identities=22% Similarity=0.183 Sum_probs=27.7
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCcc--EEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI--HVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~--~V~li~~~ 60 (283)
.+|+|||+|..|..+|..|+..+ . +|++++.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g--------------~~~eV~L~D~~ 34 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRG--------------SCSELVLVDRD 34 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--------------CCCEEEEEeCC
Confidence 37999999999999999998765 4 89999764
No 379
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=86.18 E-value=0.85 Score=39.23 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=28.9
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCcc-EEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~-~V~li~~~ 60 (283)
.++|+|||+|..|..+|..|+..+ . +|++++.+
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g--------------~~~V~l~D~~ 37 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDN--------------LADVVLFDIA 37 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHT--------------CCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--------------CceEEEEeCC
Confidence 368999999999999999998765 5 89999875
No 380
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=86.12 E-value=0.89 Score=40.04 Aligned_cols=34 Identities=24% Similarity=0.382 Sum_probs=30.0
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+.++|+|+|+|.+|..+|..+...+ .+|+++++.
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~G--------------a~V~~~d~~ 198 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMG--------------AQVTILDVN 198 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--------------CEEEEEECC
Confidence 4579999999999999999999887 899999764
No 381
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=86.11 E-value=0.69 Score=39.98 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=29.4
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.++|.|||+|..|..+|..|+..+ .+|++++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G--------------~~V~l~d~~ 38 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGG--------------FRVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSC
T ss_pred CceEEEEeeCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 468999999999999999999877 899999775
No 382
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=86.08 E-value=0.94 Score=36.16 Aligned_cols=71 Identities=14% Similarity=0.041 Sum_probs=46.9
Q ss_pred eEEEEcc-CcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEEe
Q 023375 16 HCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVD 94 (283)
Q Consensus 16 ~vvVvGg-G~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v~ 94 (283)
+|+|.|| |.+|-+++.+|.+.+ .+|+++.+.. ..+ +.+...+++++...+.+.+
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g--------------~~V~~~~R~~------~~~-----~~~~~~~~~~~~~D~~d~~ 56 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRG--------------HEVLAVVRDP------QKA-----ADRLGATVATLVKEPLVLT 56 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT--------------CEEEEEESCH------HHH-----HHHTCTTSEEEECCGGGCC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCC--------------CEEEEEEecc------ccc-----ccccCCCceEEeccccccc
Confidence 6999997 999999999999876 8999997751 111 1233457777654322111
Q ss_pred CCeEEEcCCcEEEeeEEEEcCCCC
Q 023375 95 SQKLILNDGTEVPYGLLVWSTGVG 118 (283)
Q Consensus 95 ~~~v~~~~g~~i~~d~vi~a~G~~ 118 (283)
. ..-. .+|.||.++|..
T Consensus 57 ~---~~~~----~~d~vi~~ag~~ 73 (224)
T 3h2s_A 57 E---ADLD----SVDAVVDALSVP 73 (224)
T ss_dssp H---HHHT----TCSEEEECCCCC
T ss_pred H---hhcc----cCCEEEECCccC
Confidence 1 0001 379999999875
No 383
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=85.98 E-value=0.96 Score=35.92 Aligned_cols=72 Identities=18% Similarity=0.236 Sum_probs=46.8
Q ss_pred CeEEEEcc-CcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEE
Q 023375 15 LHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDV 93 (283)
Q Consensus 15 ~~vvVvGg-G~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v 93 (283)
++|+|.|| |.+|-.++..|.+.+ .+|+++.+.. +.+. .+. .+++++...+.+.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g--------------~~V~~~~R~~------~~~~-----~~~-~~~~~~~~D~~d~ 54 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG--------------HEVTAIVRNA------GKIT-----QTH-KDINILQKDIFDL 54 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--------------CEEEEEESCS------HHHH-----HHC-SSSEEEECCGGGC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC--------------CEEEEEEcCc------hhhh-----hcc-CCCeEEeccccCh
Confidence 36999995 999999999999876 8999998752 1111 122 5677665422211
Q ss_pred eCCeEEEcCCcEEEeeEEEEcCCCCC
Q 023375 94 DSQKLILNDGTEVPYGLLVWSTGVGP 119 (283)
Q Consensus 94 ~~~~v~~~~g~~i~~d~vi~a~G~~~ 119 (283)
+. .. .-.+|.||.++|..+
T Consensus 55 ~~---~~----~~~~d~vi~~ag~~~ 73 (221)
T 3ew7_A 55 TL---SD----LSDQNVVVDAYGISP 73 (221)
T ss_dssp CH---HH----HTTCSEEEECCCSST
T ss_pred hh---hh----hcCCCEEEECCcCCc
Confidence 11 00 013799999999744
No 384
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=85.92 E-value=0.99 Score=35.33 Aligned_cols=32 Identities=19% Similarity=0.259 Sum_probs=28.9
Q ss_pred CeEEEEcc-CcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGg-G~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
++|+|.|| |.+|-+++..|.+.+ .+|+++.++
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g--------------~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAG--------------YEVTVLVRD 36 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC--------------CeEEEEEeC
Confidence 68999997 999999999999876 899999886
No 385
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=85.87 E-value=0.82 Score=39.66 Aligned_cols=32 Identities=22% Similarity=0.149 Sum_probs=28.3
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
++|.|||+|..|..+|..|++.+ .+|+++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g--------------~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKG--------------QSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCC--------------CEEEEEeCC
Confidence 68999999999999999998876 789999654
No 386
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=85.70 E-value=0.88 Score=38.83 Aligned_cols=34 Identities=18% Similarity=0.267 Sum_probs=29.3
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
...++|.|||.|..|..+|..|+ .+ .+|++++++
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG--------------~~V~v~d~~ 43 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SK--------------HEVVLQDVS 43 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TT--------------SEEEEECSC
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cC--------------CEEEEEECC
Confidence 35689999999999999999999 87 899999764
No 387
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=85.68 E-value=2.1 Score=38.66 Aligned_cols=60 Identities=20% Similarity=0.154 Sum_probs=40.1
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-C--------CCCCCCHHHHHHHHHHHHhCCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-E--------ILSSFDDRLRHYATTQLSKSGV 83 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~--------~l~~~~~~~~~~~~~~l~~~gV 83 (283)
...+..|||.|..|.-+|..|++.+ .+|+.++.+ . ..|...+.+.+.+.+.+...++
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G--------------~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l 75 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHG--------------VDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKL 75 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTT--------------CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCE
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCC--------------CEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCce
Confidence 3457899999999999999999987 899999875 2 1233444444444444444444
Q ss_pred EEE
Q 023375 84 RLV 86 (283)
Q Consensus 84 ~v~ 86 (283)
.+-
T Consensus 76 ~~t 78 (431)
T 3ojo_A 76 KVS 78 (431)
T ss_dssp EEE
T ss_pred EEe
Confidence 443
No 388
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=85.58 E-value=0.85 Score=41.77 Aligned_cols=34 Identities=18% Similarity=0.333 Sum_probs=30.4
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
...+|.|||.|..|.-+|..|++.+ .+|++++.+
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G--------------~~V~~~d~~ 40 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIG--------------HDVFCLDVD 40 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred CCceEEEECcCHHHHHHHHHHHhCC--------------CEEEEEECC
Confidence 4579999999999999999999887 899999764
No 389
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=85.52 E-value=1 Score=40.05 Aligned_cols=36 Identities=25% Similarity=0.348 Sum_probs=30.9
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 61 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~ 61 (283)
+..+|||+|+|.+|+.+|..+...+. .+|+++++.-
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga-------------~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGA-------------TKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTC-------------CEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCC-------------CeEEEEECCC
Confidence 44799999999999999999998771 4999999873
No 390
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=85.47 E-value=0.95 Score=38.09 Aligned_cols=32 Identities=28% Similarity=0.371 Sum_probs=27.3
Q ss_pred CeEEEEcc-CcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGg-G~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
++|+|.|| |++|-.++..|.+.+ .+|+.+.++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G--------------~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG--------------HEVTLVSRK 33 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--------------CEEEEEESS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC--------------CEEEEEECC
Confidence 47999997 999999999999877 778877664
No 391
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=85.31 E-value=0.63 Score=44.30 Aligned_cols=53 Identities=11% Similarity=0.024 Sum_probs=38.4
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CCCCCCCHHHHHHHHHHHHhC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKS 81 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~l~~~~~~~~~~~~~~l~~~ 81 (283)
-.++|||+|..|.-+|+.|++.+ ++|.+|+++ .+...........+.+++.+.
T Consensus 9 ~D~~i~GtGl~~~~~a~~~~~~g--------------~~vl~id~~~~~gg~~~~~~l~~l~~w~~~~ 62 (650)
T 1vg0_A 9 FDVIVIGTGLPESIIAAACSRSG--------------QRVLHVDSRSYYGGNWASFSFSGLLSWLKEY 62 (650)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCGGGCEECHHHHHHHHHHT
T ss_pred CCEEEECCcHHHHHHHHHHHhCC--------------CEEEEEcCCCcccCccccccHHHHHHHHHHh
Confidence 58999999999999999999987 899999998 444322211133455555544
No 392
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=85.25 E-value=2.2 Score=36.44 Aligned_cols=34 Identities=12% Similarity=0.128 Sum_probs=28.8
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCcc-EEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~-~V~li~~~ 60 (283)
..++|.|||.|..|..+|..|++.+ . +|+++++.
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G--------------~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAG--------------AIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHS--------------CCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCC--------------CCeEEEEcCC
Confidence 3468999999999999999999876 6 89999764
No 393
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=85.17 E-value=0.94 Score=38.43 Aligned_cols=34 Identities=12% Similarity=0.177 Sum_probs=29.4
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+.++|.|||.|..|..+|..|.+.+ .+|++++++
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G--------------~~V~~~d~~ 35 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAG--------------YLLNVFDLV 35 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCC--------------CeEEEEcCC
Confidence 3578999999999999999999877 899999664
No 394
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=85.13 E-value=0.58 Score=39.76 Aligned_cols=32 Identities=31% Similarity=0.511 Sum_probs=28.5
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.+|+|||+|..|.-+|..|++.+ .+|+++.++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g--------------~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSL--------------PHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHC--------------TTCEEEESS
T ss_pred cEEEEECCCHHHHHHHHHHHHCC--------------CeEEEEEec
Confidence 58999999999999999999876 788888876
No 395
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=85.11 E-value=1.2 Score=42.33 Aligned_cols=43 Identities=19% Similarity=0.051 Sum_probs=35.5
Q ss_pred CCCcccCCCCCEEEeccccccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 139 DEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 139 d~~l~~~~~~~VfaiGD~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
+++|+++..+++|++|+++... --..|..||..|+.|+...+.
T Consensus 370 ~~tle~k~~~gLf~AGqi~g~~----------Gy~eA~a~G~~AG~naa~~~~ 412 (641)
T 3cp8_A 370 RSTMETRPVENLFFAGQINGTS----------GYEEAAAQGLMAGINAVRKIL 412 (641)
T ss_dssp CTTSBBSSSBTEEECSGGGTBC----------CHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccccCcCCEEEEEeecCCc----------cHHHHHHHHHHHHHHHHHHhc
Confidence 4688998899999999999641 233788999999999988887
No 396
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=85.10 E-value=0.9 Score=41.25 Aligned_cols=32 Identities=25% Similarity=0.328 Sum_probs=29.2
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
++|.|||.|..|.-+|..|++.+ .+|++++.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G--------------~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELG--------------ANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhcC--------------CEEEEEECC
Confidence 58999999999999999999887 899999765
No 397
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=85.09 E-value=0.8 Score=39.80 Aligned_cols=37 Identities=16% Similarity=0.065 Sum_probs=29.6
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+...+|.|||+|..|..+|..|+..+- -.+|++++..
T Consensus 19 ~~~~kV~ViGaG~vG~~~a~~la~~g~------------~~ev~L~Di~ 55 (330)
T 3ldh_A 19 RSYNKITVVGCDAVGMADAISVLMKDL------------ADEVALVDVM 55 (330)
T ss_dssp CCCCEEEEESTTHHHHHHHHHHHHHCC------------CSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC------------CCeEEEEECC
Confidence 356899999999999999999987651 0389999764
No 398
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=85.05 E-value=1.4 Score=38.85 Aligned_cols=34 Identities=12% Similarity=0.234 Sum_probs=30.1
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..++|+|+|+|.+|..+|..+.+++ .+|.+++..
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G--------------~~vi~~d~~ 46 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMG--------------YKIAVLDPT 46 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--------------CEEEEEeCC
Confidence 4579999999999999999999887 888888864
No 399
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=85.05 E-value=1 Score=40.29 Aligned_cols=34 Identities=18% Similarity=0.286 Sum_probs=29.8
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
...+|+|+|+|.+|..+|..+..++ .+|+++++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G--------------a~V~v~D~~ 204 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLG--------------AIVRAFDTR 204 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--------------CEEEEEcCC
Confidence 3579999999999999999998887 889998765
No 400
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=85.01 E-value=2.9 Score=34.99 Aligned_cols=83 Identities=13% Similarity=0.131 Sum_probs=49.7
Q ss_pred cCeEEEEcc-CcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCH-HHHHHHHHHHHhCCCEEEeCceE
Q 023375 14 LLHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDD-RLRHYATTQLSKSGVRLVRGIVK 91 (283)
Q Consensus 14 ~~~vvVvGg-G~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~-~~~~~~~~~l~~~gV~v~~~~V~ 91 (283)
.++|+|.|| |..|-.++..|.+.+ .+|+++.+...- ...+ +-.+.+ +.+...|++++...+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g--------------~~V~~~~R~~~~-~~~~~~~~~~~-~~l~~~~v~~v~~D~~ 65 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAG--------------NPTYALVRKTIT-AANPETKEELI-DNYQSLGVILLEGDIN 65 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHT--------------CCEEEEECCSCC-SSCHHHHHHHH-HHHHHTTCEEEECCTT
T ss_pred CcEEEEECCCchHHHHHHHHHHhCC--------------CcEEEEECCCcc-cCChHHHHHHH-HHHHhCCCEEEEeCCC
Confidence 368999996 999999999999876 788888876311 1122 222222 3455678887654221
Q ss_pred EEeCCeEE-EcCCcEEEeeEEEEcCCCC
Q 023375 92 DVDSQKLI-LNDGTEVPYGLLVWSTGVG 118 (283)
Q Consensus 92 ~v~~~~v~-~~~g~~i~~d~vi~a~G~~ 118 (283)
+. +.+. .-+ .+|.||.++|..
T Consensus 66 d~--~~l~~~~~----~~d~vi~~a~~~ 87 (307)
T 2gas_A 66 DH--ETLVKAIK----QVDIVICAAGRL 87 (307)
T ss_dssp CH--HHHHHHHT----TCSEEEECSSSS
T ss_pred CH--HHHHHHHh----CCCEEEECCccc
Confidence 11 0000 001 278888888754
No 401
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=84.97 E-value=1.1 Score=39.71 Aligned_cols=35 Identities=23% Similarity=0.274 Sum_probs=30.7
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+..+|+|+|+|.+|+.+|..|...+. .+|+++++.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~-------------~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGV-------------KNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTC-------------CEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCC-------------CeEEEEECC
Confidence 45799999999999999999998761 489999987
No 402
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=84.96 E-value=1.1 Score=38.08 Aligned_cols=34 Identities=18% Similarity=0.217 Sum_probs=30.1
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..+++.|||.|.+|..+|..+..++ .+|+++++.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G--------------~~V~~~d~~ 189 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALG--------------ANVKVGARS 189 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCC--------------CEEEEEECC
Confidence 4579999999999999999999877 899999764
No 403
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=84.80 E-value=2.5 Score=38.29 Aligned_cols=60 Identities=13% Similarity=0.277 Sum_probs=41.6
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC-CC--------CCCCCHHHHHHHHHHHHhCCCE
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EI--------LSSFDDRLRHYATTQLSKSGVR 84 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~-~~--------l~~~~~~~~~~~~~~l~~~gV~ 84 (283)
..++.|||.|..|.-+|..|++.+ .+|++++.+ .. .|...+.+.+.+.+.+...++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G--------------~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~ 73 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFG--------------HEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLS 73 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEE
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCC--------------CEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEE
Confidence 468999999999999999999987 899999875 21 2333444544444444444455
Q ss_pred EEe
Q 023375 85 LVR 87 (283)
Q Consensus 85 v~~ 87 (283)
+-.
T Consensus 74 ~tt 76 (446)
T 4a7p_A 74 FTT 76 (446)
T ss_dssp EES
T ss_pred EEC
Confidence 443
No 404
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=84.77 E-value=1.2 Score=42.55 Aligned_cols=51 Identities=12% Similarity=-0.003 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHhCCCEEEeC-ceEEEe--CC---eEEE---cCCc--EEEeeEEEEcCCCC
Q 023375 68 DRLRHYATTQLSKSGVRLVRG-IVKDVD--SQ---KLIL---NDGT--EVPYGLLVWSTGVG 118 (283)
Q Consensus 68 ~~~~~~~~~~l~~~gV~v~~~-~V~~v~--~~---~v~~---~~g~--~i~~d~vi~a~G~~ 118 (283)
..+...+.+.+.+.||+++.+ .|.++. ++ +|.. .+|+ .+.++.||+|||..
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 219 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGY 219 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcc
Confidence 356666777777889999999 788874 33 3443 4565 48999999999864
No 405
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=84.66 E-value=1.1 Score=39.50 Aligned_cols=35 Identities=23% Similarity=0.326 Sum_probs=30.4
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
-..++|+|+|+|.+|..+|..+..++ .+|+++++.
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~G--------------a~V~~~d~~ 200 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGMG--------------ATVTVLDIN 200 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCC--------------CEEEEEeCC
Confidence 34689999999999999999998887 889999764
No 406
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=84.59 E-value=1.1 Score=37.48 Aligned_cols=34 Identities=18% Similarity=0.158 Sum_probs=29.5
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+.++++|+|+|-+|..+|..|++.+ .+|+++++.
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G--------------~~V~v~~R~ 151 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLD--------------CAVTITNRT 151 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcC--------------CEEEEEECC
Confidence 3578999999999999999999877 889998664
No 407
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=84.56 E-value=0.91 Score=41.35 Aligned_cols=80 Identities=23% Similarity=0.283 Sum_probs=47.0
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeCceE
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVK 91 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~ 91 (283)
+..++|+|+|||-+|..+|..|.+. .+|.+||.++ +-.+.+.+.|. +..++.+..+
T Consensus 233 ~~~~~v~I~GgG~ig~~lA~~L~~~---------------~~v~iIE~d~-------~r~~~la~~l~--~~~Vi~GD~t 288 (461)
T 4g65_A 233 KPYRRIMIVGGGNIGASLAKRLEQT---------------YSVKLIERNL-------QRAEKLSEELE--NTIVFCGDAA 288 (461)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHTTT---------------SEEEEEESCH-------HHHHHHHHHCT--TSEEEESCTT
T ss_pred ccccEEEEEcchHHHHHHHHHhhhc---------------CceEEEecCH-------HHHHHHHHHCC--CceEEecccc
Confidence 4567999999999999999988532 7899997752 22233333332 3444443110
Q ss_pred EEeCCeEEEcCCcEEEeeEEEEcCCCCC
Q 023375 92 DVDSQKLILNDGTEVPYGLLVWSTGVGP 119 (283)
Q Consensus 92 ~v~~~~v~~~~g~~i~~d~vi~a~G~~~ 119 (283)
+ ..+ +.+...-.+|.++.+|+.--
T Consensus 289 d---~~~-L~ee~i~~~D~~ia~T~~De 312 (461)
T 4g65_A 289 D---QEL-LTEENIDQVDVFIALTNEDE 312 (461)
T ss_dssp C---HHH-HHHTTGGGCSEEEECCSCHH
T ss_pred c---hhh-HhhcCchhhcEEEEcccCcH
Confidence 0 001 11111235899999888643
No 408
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=84.51 E-value=1.2 Score=37.77 Aligned_cols=34 Identities=15% Similarity=0.202 Sum_probs=30.0
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..++|.|||.|.+|..+|..+..++ .+|+++++.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G--------------~~V~~~dr~ 187 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALG--------------AKVKVGARE 187 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCC--------------CEEEEEECC
Confidence 4579999999999999999999877 899999764
No 409
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=84.49 E-value=0.96 Score=40.79 Aligned_cols=31 Identities=23% Similarity=0.192 Sum_probs=28.2
Q ss_pred eEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 16 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 16 ~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+|.|||.|..|..+|..|++.+ .+|++++++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G--------------~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARG--------------HEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCC--------------CEEEEEECC
Confidence 7999999999999999999877 899999764
No 410
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=84.45 E-value=1 Score=42.97 Aligned_cols=44 Identities=11% Similarity=0.039 Sum_probs=33.3
Q ss_pred CCcccCCCCCEEEeccccccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 140 EWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 140 ~~l~~~~~~~VfaiGD~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
...+| +.|++||+|||+... .-..+..+..+|.+++.++...+.
T Consensus 446 ~~~~t-~v~gl~a~Ge~~~~~-------~hg~~~~sl~~g~~ag~~a~~~~~ 489 (662)
T 3gyx_A 446 YNRMT-TVEGLWTCADGVGAS-------GHKFSSGSHAEGRIVGKQMVRWYL 489 (662)
T ss_dssp CTTBC-SSBTEECCSSSBCSC-------CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCC-ccCCeEeCccccccc-------cCccHhHHHHHHHHHHHHHHHHHh
Confidence 56677 899999999998421 122266778889999999888876
No 411
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=84.45 E-value=1.1 Score=38.75 Aligned_cols=33 Identities=15% Similarity=0.199 Sum_probs=28.7
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCcc-EEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~-~V~li~~~ 60 (283)
.++|+|||+|..|.-+|..|+..+ . +|++++.+
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g--------------~~~V~L~Di~ 47 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKD--------------LGDVYMFDII 47 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--------------CCeEEEEECC
Confidence 368999999999999999998765 5 89999876
No 412
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=84.31 E-value=1.1 Score=40.51 Aligned_cols=51 Identities=12% Similarity=-0.018 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEe----CCe---EEEcCCcEEEeeEEEEcCCCCCc
Q 023375 69 RLRHYATTQLSKSGVRLVRG-IVKDVD----SQK---LILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 69 ~~~~~~~~~l~~~gV~v~~~-~V~~v~----~~~---v~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
.+.+.+.+.+++.|++++++ +|++|. ++. |.+ +|+++.+|.||.++|..+.
T Consensus 243 ~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 243 ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 67777888889999999999 788874 332 444 6888999999999998765
No 413
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=84.28 E-value=1.2 Score=35.54 Aligned_cols=31 Identities=13% Similarity=0.201 Sum_probs=27.5
Q ss_pred eEEEEc-cCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 16 HCVVVG-GGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 16 ~vvVvG-gG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+|+|+| +|..|..+|..|.+.+ .+|++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g--------------~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLG--------------HEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTT--------------CEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 699999 9999999999998766 789999764
No 414
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=84.13 E-value=1.3 Score=38.95 Aligned_cols=34 Identities=24% Similarity=0.369 Sum_probs=29.7
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+.++|+|+|+|.+|..++..+..++ .+|+++++.
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~G--------------a~V~v~dr~ 199 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLG--------------AQVQIFDIN 199 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--------------CEEEEEeCC
Confidence 3479999999999999999999887 789999764
No 415
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=84.07 E-value=1.1 Score=38.55 Aligned_cols=36 Identities=14% Similarity=0.111 Sum_probs=28.8
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+..+|+|||+|.+|..+|..|+..+. -.+|.+++..
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~------------~~ev~L~Di~ 41 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQT------------ANELVLIDVF 41 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTC------------SSEEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC------------CCEEEEEeCC
Confidence 34689999999999999999987541 1389999875
No 416
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=84.06 E-value=1.3 Score=41.91 Aligned_cols=44 Identities=16% Similarity=0.059 Sum_probs=36.3
Q ss_pred cCCCcccCCCCCEEEeccccccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 138 IDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 138 Vd~~l~~~~~~~VfaiGD~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
.+++|+++..+++|.+|.+... .--..|..||.+|+.|..+.+.
T Consensus 380 l~~tLe~k~~~gLf~AGqinGt----------~GyeEAaaqGl~AG~nAa~~~~ 423 (637)
T 2zxi_A 380 LYPTLETKKIRGLFHAGNFNGT----------TGYEEAAGQGIVAGINAALRAF 423 (637)
T ss_dssp BCTTSBBSSSBTEEECGGGGTB----------CSHHHHHHHHHHHHHHHHHHHT
T ss_pred cCccccccCCCCEEEeeecCCc----------chHHHHHHHHHHHHHHHHHHhc
Confidence 4578999889999999999852 2234788999999999988876
No 417
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=84.01 E-value=0.48 Score=38.64 Aligned_cols=74 Identities=22% Similarity=0.203 Sum_probs=45.3
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeCceEEE
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDV 93 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~~V~~v 93 (283)
.++++|+|+|..|..+|..|.+.+ . |++++++. +.+ +.+. .|++++.+..++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g--------------~-v~vid~~~------~~~-----~~~~-~~~~~i~gd~~~~ 61 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSE--------------V-FVLAEDEN------VRK-----KVLR-SGANFVHGDPTRV 61 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSE--------------E-EEEESCGG------GHH-----HHHH-TTCEEEESCTTCH
T ss_pred CCEEEEECCChHHHHHHHHHHhCC--------------e-EEEEECCH------HHH-----HHHh-cCCeEEEcCCCCH
Confidence 368999999999999999998765 7 99997642 111 1233 5777766522110
Q ss_pred eCCeEEEcCCcEEEeeEEEEcCCCC
Q 023375 94 DSQKLILNDGTEVPYGLLVWSTGVG 118 (283)
Q Consensus 94 ~~~~v~~~~g~~i~~d~vi~a~G~~ 118 (283)
+. +..-..-.+|.+|.+++..
T Consensus 62 --~~--l~~a~i~~ad~vi~~~~~d 82 (234)
T 2aef_A 62 --SD--LEKANVRGARAVIVDLESD 82 (234)
T ss_dssp --HH--HHHTTCTTCSEEEECCSCH
T ss_pred --HH--HHhcCcchhcEEEEcCCCc
Confidence 00 0000012489999998754
No 418
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=83.93 E-value=2.1 Score=38.50 Aligned_cols=49 Identities=18% Similarity=0.194 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHhCCCEEEeC-ceEEEeCC--e-EEE-cCCcEEEeeEEEEcCCC
Q 023375 69 RLRHYATTQLSKSGVRLVRG-IVKDVDSQ--K-LIL-NDGTEVPYGLLVWSTGV 117 (283)
Q Consensus 69 ~~~~~~~~~l~~~gV~v~~~-~V~~v~~~--~-v~~-~~g~~i~~d~vi~a~G~ 117 (283)
.+.+.+.+.+++.|++++++ +|++|+.+ + +.+ .+++++.+|.||+|++.
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~~~~~~ad~vv~a~p~ 288 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPA 288 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEECSSCEEEESEEEECSCH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEECCeEEEcCEEEECCCH
Confidence 57778888899999999999 89998642 3 332 35668999999999975
No 419
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=83.77 E-value=1.2 Score=39.37 Aligned_cols=34 Identities=15% Similarity=0.139 Sum_probs=29.7
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..++|+|+|+|.+|..+|..+..++ .+|+++++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G--------------a~V~~~d~~ 204 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLG--------------AVVMATDVR 204 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 4679999999999999999998877 789888765
No 420
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=83.65 E-value=1.1 Score=40.78 Aligned_cols=35 Identities=20% Similarity=0.240 Sum_probs=30.6
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
...++|.|||+|..|..+|..|+..+ .+|++++.+
T Consensus 35 ~~~~kV~VIGaG~MG~~iA~~la~~G--------------~~V~l~D~~ 69 (463)
T 1zcj_A 35 QPVSSVGVLGLGTMGRGIAISFARVG--------------ISVVAVESD 69 (463)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTTT--------------CEEEEECSS
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCC--------------CeEEEEECC
Confidence 34578999999999999999999877 899999775
No 421
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=83.50 E-value=1.2 Score=38.30 Aligned_cols=32 Identities=22% Similarity=0.210 Sum_probs=27.7
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCcc--EEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI--HVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~--~V~li~~~ 60 (283)
++|+|||+|..|..+|..|+..+ . +|++++.+
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g--------------~~~~V~l~D~~ 34 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKG--------------FAREMVLIDVD 34 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT--------------CCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--------------CCCeEEEEeCC
Confidence 37999999999999999998765 5 89999764
No 422
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=83.46 E-value=1.3 Score=37.38 Aligned_cols=32 Identities=19% Similarity=0.161 Sum_probs=29.1
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
++|.|||.|..|..+|..|++.+ .+|++++++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G--------------~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG--------------CSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHCC--------------CeEEEEcCC
Confidence 58999999999999999999877 899999775
No 423
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=83.33 E-value=1.4 Score=40.84 Aligned_cols=55 Identities=18% Similarity=0.149 Sum_probs=35.7
Q ss_pred CccccCCCcccCCCCCEEEeccccccCcCCCCcCCCc-chHHHHHHHHHHHHHHHHHh
Q 023375 134 GRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPA-LAQVAERQGKYLFSLLNRIG 190 (283)
Q Consensus 134 g~i~Vd~~l~~~~~~~VfaiGD~a~~~~~~~~~~~p~-~~~~A~~qg~~~a~~i~~~~ 190 (283)
|.|.||...|+ ..|++||+|+|+... ..|...+.. ....|.--|+.+++++....
T Consensus 355 GGi~vd~~~~t-~I~GLyAaGE~a~~g-~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~ 410 (540)
T 1chu_A 355 GGVMVDDHGRT-DVEGLYAIGEVSYTG-LHGANRMASNSLLECLVYGWSAAEDITRRM 410 (540)
T ss_dssp CEEECCTTCBC-SSBTEEECGGGEECS-SSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcEEECCCCCC-ccCCEEecccccccc-ccCCCcCcchhHHHHHHHHHHHHHHHHHhc
Confidence 66788888887 899999999998321 011111121 22346667899998876654
No 424
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=83.11 E-value=1.4 Score=38.09 Aligned_cols=36 Identities=17% Similarity=0.283 Sum_probs=28.8
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
...+|+|||+|..|..+|..|+..+- ..+|++++..
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~------------~~~l~l~D~~ 39 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGI------------TDELVVIDVN 39 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTC------------CSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC------------CceEEEEecc
Confidence 45789999999999999999987651 0389999763
No 425
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=83.08 E-value=1.1 Score=38.33 Aligned_cols=30 Identities=23% Similarity=0.255 Sum_probs=27.2
Q ss_pred eEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeC
Q 023375 16 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA 59 (283)
Q Consensus 16 ~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~ 59 (283)
+|.|||+|..|..+|..|++.+ .+|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g--------------~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNG--------------NEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHC--------------CEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCC--------------CeEEEEEc
Confidence 7999999999999999999876 78999966
No 426
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=83.02 E-value=1.4 Score=40.39 Aligned_cols=24 Identities=38% Similarity=0.418 Sum_probs=21.3
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhh
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFI 37 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~ 37 (283)
..+|+|||||.+|+.+|..|++.+
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G 27 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSG 27 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTT
T ss_pred CceEEEECCCHHHHHHHHHHHHCC
Confidence 358999999999999999999864
No 427
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=82.82 E-value=1.5 Score=37.51 Aligned_cols=96 Identities=17% Similarity=0.292 Sum_probs=52.9
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCC---EEEeC
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGV---RLVRG 88 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV---~v~~~ 88 (283)
+...+|+.||+|+.++.. ..+++.. +.+|+-++ .++++.+.+++.+++.|+ +++.+
T Consensus 121 ~~g~rVLDIGcG~G~~ta-~~lA~~~-------------ga~V~gID-------is~~~l~~Ar~~~~~~gl~~v~~v~g 179 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTG-ILLSHVY-------------GMRVNVVE-------IEPDIAELSRKVIEGLGVDGVNVITG 179 (298)
T ss_dssp CTTCEEEEECCCSSCHHH-HHHHHTT-------------CCEEEEEE-------SSHHHHHHHHHHHHHHTCCSEEEEES
T ss_pred CCcCEEEEECCCccHHHH-HHHHHcc-------------CCEEEEEE-------CCHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 456799999999754422 2233321 17899995 456677777777777664 44333
Q ss_pred ceEEEeCCeEEEcCCcEEEeeEEEEcCCCCCc--hhhhccCCCCCCCCccccC
Q 023375 89 IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS--TLVKSLDLPKSPGGRIGID 139 (283)
Q Consensus 89 ~V~~v~~~~v~~~~g~~i~~d~vi~a~G~~~~--~~~~~~~l~~~~~g~i~Vd 139 (283)
+...+.+ -++|.|+.+.. .+. .+++.+---+.+.|++.+.
T Consensus 180 -------Da~~l~d---~~FDvV~~~a~-~~d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 180 -------DETVIDG---LEFDVLMVAAL-AEPKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp -------CGGGGGG---CCCSEEEECTT-CSCHHHHHHHHHHHCCTTCEEEEE
T ss_pred -------chhhCCC---CCcCEEEECCC-ccCHHHHHHHHHHHcCCCcEEEEE
Confidence 2111222 24899988765 333 2333332223445555543
No 428
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=82.75 E-value=1.2 Score=35.66 Aligned_cols=33 Identities=21% Similarity=0.264 Sum_probs=29.3
Q ss_pred cCeEEEEcc-CcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGg-G~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.++|+|.|| |.+|-.++..|.+.+ .+|+++.+.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g--------------~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRG--------------FEVTAVVRH 37 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTT--------------CEEEEECSC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCC--------------CEEEEEEcC
Confidence 468999995 999999999999876 899999886
No 429
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=82.75 E-value=1.5 Score=37.62 Aligned_cols=36 Identities=22% Similarity=0.315 Sum_probs=28.6
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
...+|+|||+|..|..+|..++..+. ..+|.|++..
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~------------~~ev~L~Di~ 48 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGI------------ADRLVLLDLS 48 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTC------------CSEEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC------------CCEEEEEcCC
Confidence 44789999999999999999876551 1389999876
No 430
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=82.72 E-value=1.3 Score=39.97 Aligned_cols=33 Identities=12% Similarity=0.209 Sum_probs=29.0
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
...+|.|||.|..|.-+|..|++ + .+|++++.+
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G--------------~~V~~~D~~ 67 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-N--------------HEVVALDIV 67 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-T--------------SEEEEECSC
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-C--------------CeEEEEecC
Confidence 44689999999999999999987 6 899999875
No 431
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=82.67 E-value=1.5 Score=37.87 Aligned_cols=33 Identities=21% Similarity=0.239 Sum_probs=28.3
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCcc-EEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~-~V~li~~~ 60 (283)
..+|+|||+|..|.-+|..|+..+ . +|+|++.+
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g--------------~~~v~L~Di~ 37 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKN--------------LGDVVLFDIV 37 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--------------CCeEEEEeCC
Confidence 358999999999999999998765 4 79999865
No 432
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=82.59 E-value=1.3 Score=38.05 Aligned_cols=34 Identities=18% Similarity=0.256 Sum_probs=28.1
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.+|+|||+|..|..+|..|+... ...+|++++.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~------------~g~~V~l~D~~ 34 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQ------------LARELVLLDVV 34 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT------------CCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC------------CCCEEEEEeCC
Confidence 37999999999999999998742 01799999876
No 433
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=82.57 E-value=1.4 Score=40.26 Aligned_cols=34 Identities=24% Similarity=0.185 Sum_probs=30.0
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..++++|+|+|.+|..+|..|+..+ .+|++.+..
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~G--------------A~Viv~D~~ 297 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAG--------------ARVIVTEID 297 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCC--------------CEEEEEcCC
Confidence 4589999999999999999999988 899988653
No 434
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=82.56 E-value=1.5 Score=37.28 Aligned_cols=33 Identities=18% Similarity=0.100 Sum_probs=29.2
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.++|.|||.|..|..+|..|++.+ .+|++++++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G--------------~~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAG--------------LSTWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC--------------CeEEEEECC
Confidence 368999999999999999999877 899999664
No 435
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=82.50 E-value=1.4 Score=37.95 Aligned_cols=33 Identities=24% Similarity=0.272 Sum_probs=29.2
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..+|.|||+|..|.-+|..|++.+ .+|+++++.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G--------------~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENG--------------EEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCC--------------CeEEEEeCC
Confidence 468999999999999999999876 899999663
No 436
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=82.32 E-value=1.5 Score=37.45 Aligned_cols=34 Identities=12% Similarity=0.089 Sum_probs=29.1
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCcc-EEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~-~V~li~~~ 60 (283)
+.++++|+|+|.+|-.+|..|.+.+ . +|+++++.
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G--------------~~~V~v~nR~ 174 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTA--------------AERIDMANRT 174 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTT--------------CSEEEEECSS
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCC--------------CCEEEEEeCC
Confidence 3578999999999999999999876 5 89999664
No 437
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=82.27 E-value=1.9 Score=41.01 Aligned_cols=45 Identities=20% Similarity=0.159 Sum_probs=36.6
Q ss_pred ccCCCcccCCCCCEEEeccccccCcCCCCcCCCcchHHHHHHHHHHHHHHHHHhh
Q 023375 137 GIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVAERQGKYLFSLLNRIGK 191 (283)
Q Consensus 137 ~Vd~~l~~~~~~~VfaiGD~a~~~~~~~~~~~p~~~~~A~~qg~~~a~~i~~~~~ 191 (283)
.++.+|+++..+++|++|.+... .--..|..||.+|+.|....+.
T Consensus 374 ~L~~tle~k~~~gLf~AGqinGt----------tGYeEAaaqGl~AG~nAa~~~~ 418 (651)
T 3ces_A 374 DLKPTLESKFIQGLFFAGQINGT----------TGYEEAAAQGLLAGLNAARLSA 418 (651)
T ss_dssp GBCTTSBBSSSBTEEECSGGGTC----------CCHHHHHHHHHHHHHHHHHHHT
T ss_pred hcCccccccCCCCeEEEEEecCC----------cChHHHHHHHHHHHHHHHHHhc
Confidence 45578999889999999999842 2234799999999999988776
No 438
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=82.17 E-value=0.79 Score=41.22 Aligned_cols=53 Identities=15% Similarity=0.137 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHhCCCEEEeC-ceEEEe--CCeE--EEcCCcEEEeeEEEEcCCCCCc
Q 023375 68 DRLRHYATTQLSKSGVRLVRG-IVKDVD--SQKL--ILNDGTEVPYGLLVWSTGVGPS 120 (283)
Q Consensus 68 ~~~~~~~~~~l~~~gV~v~~~-~V~~v~--~~~v--~~~~g~~i~~d~vi~a~G~~~~ 120 (283)
..+.+.+.+.+++.|++++++ +|++|. ++.+ +..+|+++.+|.||+++|..+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 367777788888899999999 788875 3333 2357889999999999998765
No 439
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=82.16 E-value=1.6 Score=38.34 Aligned_cols=34 Identities=15% Similarity=0.239 Sum_probs=29.4
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..++|+|+|+|..|..++..+.+++ .+|.++++.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG--------------~~viv~d~~ 44 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMG--------------YKVVVLDPS 44 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--------------CEEEEEECC
Confidence 3578999999999999999999987 788888764
No 440
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=82.08 E-value=1.7 Score=37.70 Aligned_cols=37 Identities=11% Similarity=0.209 Sum_probs=29.5
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+...+|+|||+|..|..+|..|+..+- -.+++|++..
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~------------~~el~l~D~~ 43 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGI------------AQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTC------------CSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC------------CCeEEEEeCC
Confidence 456799999999999999999987641 0389999763
No 441
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=82.02 E-value=1.3 Score=38.95 Aligned_cols=33 Identities=18% Similarity=0.131 Sum_probs=29.0
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.++|.|||+|..|.-+|..|++.+ .+|++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G--------------~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG--------------QKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT--------------CCEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHHCC--------------CeEEEEeCC
Confidence 468999999999999999999876 789998663
No 442
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=81.85 E-value=1.5 Score=37.78 Aligned_cols=33 Identities=24% Similarity=0.268 Sum_probs=28.7
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCcc-EEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~-~V~li~~~ 60 (283)
.++|.|||+|..|..+|..|+..+ . +|++++..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g--------------~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKE--------------LADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--------------CCeEEEEecc
Confidence 468999999999999999998765 6 89999764
No 443
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=81.84 E-value=1.1 Score=39.90 Aligned_cols=82 Identities=11% Similarity=0.103 Sum_probs=48.7
Q ss_pred cCeEEEEcc-CcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHH-----------HhC
Q 023375 14 LLHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQL-----------SKS 81 (283)
Q Consensus 14 ~~~vvVvGg-G~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l-----------~~~ 81 (283)
.++|+|.|| |.+|.+++..|.+.+ .+|+++.++... ......+.+.+ ...
T Consensus 69 ~~~vlVTGatG~iG~~l~~~L~~~g--------------~~V~~~~R~~~~----~~~~~~l~~~l~~~~~~~~~~~~~~ 130 (427)
T 4f6c_A 69 LGNTLLTGATGFLGAYLIEALQGYS--------------HRIYCFIRADNE----EIAWYKLMTNLNDYFSEETVEMMLS 130 (427)
T ss_dssp CEEEEEECTTSHHHHHHHHHHTTTE--------------EEEEEEEECSSH----HHHHHHHHHHHHHHSCHHHHHHHHT
T ss_pred CCEEEEecCCcHHHHHHHHHHHcCC--------------CEEEEEECCCCh----HHHHHHHHHHHHHhccccccccccC
Confidence 458999995 999999999997655 899999876311 11222222222 234
Q ss_pred CCEEEeCceEEEeCCeEEEcCCcEEEeeEEEEcCCCCC
Q 023375 82 GVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 119 (283)
Q Consensus 82 gV~v~~~~V~~v~~~~v~~~~g~~i~~d~vi~a~G~~~ 119 (283)
+++++...+.+. +.+. ..-.+|.||-++|...
T Consensus 131 ~v~~v~~Dl~d~--~~l~----~~~~~d~Vih~A~~~~ 162 (427)
T 4f6c_A 131 NIEVIVGDFECM--DDVV----LPENMDTIIHAGARTD 162 (427)
T ss_dssp TEEEEEECC-----CCCC----CSSCCSEEEECCCCC-
T ss_pred ceEEEeCCCCCc--ccCC----CcCCCCEEEECCcccC
Confidence 677665433221 1111 1124899999998764
No 444
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=81.80 E-value=1.3 Score=37.27 Aligned_cols=32 Identities=22% Similarity=0.172 Sum_probs=28.9
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
++|.|||.|..|..+|..|++.+ .+|++++++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G--------------~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAG--------------FDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHT--------------CCEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHCC--------------CeEEEEcCC
Confidence 57999999999999999999877 889999775
No 445
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=81.64 E-value=1.4 Score=37.13 Aligned_cols=33 Identities=21% Similarity=0.250 Sum_probs=29.0
Q ss_pred cCeEEEEcc-CcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGg-G~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.++|+|.|| |++|-.++..|.+.+ .+|+++.+.
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g--------------~~V~~~~r~ 40 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASG--------------EEVTVLDDL 40 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT--------------CCEEEECCC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCC--------------CEEEEEecC
Confidence 578999998 999999999999876 788888775
No 446
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=81.57 E-value=1.8 Score=36.46 Aligned_cols=33 Identities=15% Similarity=0.366 Sum_probs=30.0
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.++++|+|+|-+|-.+|..|.+.+ .+|+++.+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G--------------~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG--------------LQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 679999999999999999999887 899999775
No 447
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=81.54 E-value=1.3 Score=37.17 Aligned_cols=34 Identities=15% Similarity=0.143 Sum_probs=29.7
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+.++++|+|+|-+|-.+|..|.+.+ .+|+++++.
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G--------------~~v~v~~R~ 151 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQ--------------QNIVLANRT 151 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTT--------------CEEEEEESS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC--------------CEEEEEECC
Confidence 3578999999999999999999876 899999775
No 448
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=81.54 E-value=1.6 Score=36.82 Aligned_cols=33 Identities=15% Similarity=0.098 Sum_probs=28.2
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.++|.|||.|..|..+|..|...+ .+|++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g--------------~~V~~~~~~ 36 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEG--------------VTVYAFDLM 36 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCC--------------CeEEEEeCC
Confidence 368999999999999999998765 788888653
No 449
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=81.50 E-value=1.7 Score=38.08 Aligned_cols=32 Identities=19% Similarity=0.314 Sum_probs=26.8
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
++|+|+|+|.+|.++|..+.+.+ .++.+++..
T Consensus 2 ~~Ililg~g~~g~~~~~a~~~~G--------------~~v~~~~~~ 33 (380)
T 3ax6_A 2 KKIGIIGGGQLGKMMTLEAKKMG--------------FYVIVLDPT 33 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 58999999999999999998876 667766653
No 450
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=81.49 E-value=1.7 Score=36.25 Aligned_cols=31 Identities=23% Similarity=0.215 Sum_probs=27.1
Q ss_pred eEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 16 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 16 ~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+|.|||+|..|..+|..|.+.+ .+|++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g--------------~~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRG--------------HYLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCC--------------CEEEEEECC
Confidence 7999999999999999998776 789888653
No 451
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=81.49 E-value=1.4 Score=37.13 Aligned_cols=40 Identities=28% Similarity=0.282 Sum_probs=28.2
Q ss_pred CHHHHcccCeEEEEcc-CcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 7 SEEEKSRLLHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 7 ~~~~~~~~~~vvVvGg-G~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.+....+.++++|.|| |.+|.++|..|++.+ .+|+++.++
T Consensus 5 ~~~~~~~~k~vlITGas~GIG~~~a~~L~~~G--------------~~V~~~~r~ 45 (311)
T 3o26_A 5 CPNTVTKRRCAVVTGGNKGIGFEICKQLSSNG--------------IMVVLTCRD 45 (311)
T ss_dssp -------CCEEEESSCSSHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred CCCccCCCcEEEEecCCchHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 3333445678888885 889999999999877 899999765
No 452
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=81.36 E-value=1.8 Score=39.05 Aligned_cols=34 Identities=24% Similarity=0.176 Sum_probs=30.1
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..++|+|+|.|.+|..+|..+..++ .+|++.+..
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~G--------------a~Viv~D~d 252 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMG--------------SIVYVTEID 252 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 4589999999999999999999887 899988754
No 453
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=81.20 E-value=1.8 Score=36.33 Aligned_cols=34 Identities=18% Similarity=0.081 Sum_probs=29.1
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+.++++|||+|..|-.+|..|.+.+ .+|+++++.
T Consensus 128 ~~~~v~iiGaG~~g~aia~~L~~~g--------------~~V~v~~r~ 161 (275)
T 2hk9_A 128 KEKSILVLGAGGASRAVIYALVKEG--------------AKVFLWNRT 161 (275)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHHT--------------CEEEEECSS
T ss_pred CCCEEEEECchHHHHHHHHHHHHcC--------------CEEEEEECC
Confidence 3478999999999999999998876 788888664
No 454
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=81.13 E-value=1.8 Score=36.21 Aligned_cols=34 Identities=21% Similarity=0.175 Sum_probs=27.2
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
++|.|||.|..|..+|..|...+. ..+|+++++.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~------------~~~V~~~d~~ 35 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGF------------KGKIYGYDIN 35 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTC------------CSEEEEECSC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCC------------CcEEEEEeCC
Confidence 579999999999999999987650 0288888654
No 455
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=80.80 E-value=1.3 Score=39.49 Aligned_cols=30 Identities=27% Similarity=0.303 Sum_probs=27.3
Q ss_pred eEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 16 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 16 ~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+|.|||.|..|.-+|..|++ + .+|++++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G--------------~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-Q--------------NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-T--------------SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC-C--------------CEEEEEECC
Confidence 79999999999999999997 6 899999764
No 456
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=80.76 E-value=2.1 Score=36.93 Aligned_cols=34 Identities=6% Similarity=0.054 Sum_probs=29.5
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCcc-EEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~-~V~li~~~ 60 (283)
+.++++|+|+|-+|-.+|..|++.+ . +|+++.+.
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~G--------------a~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDG--------------VKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTT--------------CSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCC--------------CCEEEEEECC
Confidence 4579999999999999999999876 5 89999875
No 457
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=80.63 E-value=2 Score=36.32 Aligned_cols=34 Identities=21% Similarity=0.297 Sum_probs=29.1
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCcc-EEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~-~V~li~~~ 60 (283)
+.++++|+|+|-+|-.+|..|+..+ . +|+++.+.
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G--------------~~~v~i~~R~ 160 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHG--------------VQKLQVADLD 160 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--------------CSEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC--------------CCEEEEEECC
Confidence 4579999999999999999999876 5 79999664
No 458
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=80.51 E-value=1.9 Score=36.75 Aligned_cols=33 Identities=15% Similarity=0.067 Sum_probs=29.0
Q ss_pred cCeEEEEcc-CcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGg-G~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.++|+|.|| |.+|..++..|.+.+ .+|+++.+.
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G--------------~~V~~~~r~ 36 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKG--------------YEVYGADRR 36 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC--------------CEEEEEECC
Confidence 468999997 999999999999876 899999875
No 459
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=80.46 E-value=2.1 Score=36.47 Aligned_cols=34 Identities=15% Similarity=0.055 Sum_probs=29.3
Q ss_pred ccCeEEEEcc-CcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGg-G~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+.++|+|.|| |++|.+++..|.+.+ .+|+++.+.
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g--------------~~V~~~~r~ 44 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHG--------------YKVRGTARS 44 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--------------CEEEEEESS
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 4468999997 999999999999876 889988764
No 460
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=80.42 E-value=1.8 Score=38.72 Aligned_cols=34 Identities=21% Similarity=0.257 Sum_probs=28.8
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..++|+|+|||..|.+++..+.+++ .+|.+++..
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~lG--------------~~v~v~d~~ 67 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSMG--------------YRVAVLDPD 67 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--------------CEEEEECCC
Confidence 3468999999999999999999887 777777653
No 461
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=80.42 E-value=1.8 Score=39.36 Aligned_cols=34 Identities=21% Similarity=0.315 Sum_probs=28.7
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
++|.|||.|..|..+|..|++.+. +.+|++++++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~------------G~~V~~~d~~ 39 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCP------------EIRVTVVDVN 39 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCT------------TSEEEEECSC
T ss_pred cEEEEECCCHHHHHHHHHHHhcCC------------CCEEEEEECC
Confidence 589999999999999999998720 1789999764
No 462
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=80.39 E-value=1.3 Score=44.43 Aligned_cols=62 Identities=11% Similarity=0.144 Sum_probs=44.0
Q ss_pred HHHHcccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCC------------CCCCHHHHHHHH
Q 023375 8 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL------------SSFDDRLRHYAT 75 (283)
Q Consensus 8 ~~~~~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l------------~~~~~~~~~~~~ 75 (283)
.+++-+..+|+|||.|..|.|+|..|+..+- .+++|++...+- ..++..-.+.+.
T Consensus 21 ~q~rL~~s~VlIvG~GGlGseiak~La~aGV-------------g~itlvD~D~V~~sNL~RQ~l~~~~dvG~~Ka~a~~ 87 (1015)
T 3cmm_A 21 AMLKMQTSNVLILGLKGLGVEIAKNVVLAGV-------------KSMTVFDPEPVQLADLSTQFFLTEKDIGQKRGDVTR 87 (1015)
T ss_dssp HHHHHTTCEEEEECCSHHHHHHHHHHHHHCC-------------SEEEEECCSBCCGGGGGTCTTCCGGGTTSBHHHHHH
T ss_pred HHHHHhcCEEEEECCChHHHHHHHHHHHcCC-------------CeEEEecCCEechhhhccccccChhhcChHHHHHHH
Confidence 3456677899999999999999999998873 699999875321 112233345566
Q ss_pred HHHHhCC
Q 023375 76 TQLSKSG 82 (283)
Q Consensus 76 ~~l~~~g 82 (283)
+.|++.+
T Consensus 88 ~~L~~lN 94 (1015)
T 3cmm_A 88 AKLAELN 94 (1015)
T ss_dssp HHHTTSC
T ss_pred HHHHHHC
Confidence 6676653
No 463
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=80.37 E-value=2.2 Score=36.13 Aligned_cols=34 Identities=24% Similarity=0.349 Sum_probs=29.4
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCcc-EEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~-~V~li~~~ 60 (283)
+.++++|+|+|-+|-.+|..|.+.+ . +|+++.+.
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G--------------~~~v~v~nRt 155 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNF--------------AKDIYVVTRN 155 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTT--------------CSEEEEEESC
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcC--------------CCEEEEEeCC
Confidence 3579999999999999999999876 5 89999775
No 464
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=80.30 E-value=1.9 Score=36.37 Aligned_cols=32 Identities=19% Similarity=0.203 Sum_probs=27.8
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.+|.|||.|..|..+|..|...+ .+|+++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g--------------~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAG--------------YSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhCC--------------CEEEEEeCC
Confidence 48999999999999999998765 788888654
No 465
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=80.18 E-value=2.1 Score=38.28 Aligned_cols=35 Identities=14% Similarity=0.296 Sum_probs=29.3
Q ss_pred CEEEeC-ceEEEeCC----eEEEcCCcEEEeeEEEEcCCC
Q 023375 83 VRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGV 117 (283)
Q Consensus 83 V~v~~~-~V~~v~~~----~v~~~~g~~i~~d~vi~a~G~ 117 (283)
++++++ +|++|+.+ .|++.+|+++.+|.||+|++.
T Consensus 248 ~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~ 287 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPH 287 (470)
T ss_dssp EEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCH
T ss_pred CEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCH
Confidence 789999 89999643 466778889999999999975
No 466
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=80.14 E-value=2.2 Score=36.66 Aligned_cols=34 Identities=15% Similarity=0.095 Sum_probs=30.1
Q ss_pred ccCeEEEEcc-CcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGg-G~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..++|+|.|| |++|-.++..|.+.+ .+|+.+.+.
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g--------------~~V~~~~r~ 58 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLN--------------QVVIGLDNF 58 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT--------------CEEEEEECC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 5679999995 999999999999876 899999875
No 467
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=80.11 E-value=2.1 Score=37.04 Aligned_cols=35 Identities=14% Similarity=0.120 Sum_probs=29.2
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCcc-EEEEEeCC
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN 60 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~-~V~li~~~ 60 (283)
.+..+|+|||+|..|..+|..|+..+ . +|+|++..
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~--------------~~~v~L~Di~ 40 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKE--------------LGDVVLFDIA 40 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCC--------------CCeEEEEeCC
Confidence 34579999999999999999998765 4 89999875
No 468
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=80.09 E-value=1.9 Score=36.86 Aligned_cols=33 Identities=15% Similarity=0.187 Sum_probs=27.5
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.+|+|||+|..|..+|..|+..+. .+|++++.+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~-------------~~v~L~Di~ 35 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKEL-------------GDIVLLDIV 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-------------SEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-------------CeEEEEeCC
Confidence 589999999999999999987651 379999865
No 469
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=80.06 E-value=2 Score=39.51 Aligned_cols=35 Identities=14% Similarity=0.146 Sum_probs=30.2
Q ss_pred cccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 12 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 12 ~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
...++|+|+|.|.+|..+|..+..++ .+|+++++.
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~G--------------a~Viv~d~~ 306 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQG--------------ARVSVTEID 306 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 35679999999999999999998877 889998664
No 470
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=80.01 E-value=2.2 Score=34.61 Aligned_cols=32 Identities=16% Similarity=0.094 Sum_probs=28.2
Q ss_pred CeEEEEcc-CcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGg-G~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
++++|.|| |.+|.++|..|++.+ .+|+++.+.
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g--------------~~V~~~~r~ 34 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAG--------------HTVIGIDRG 34 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--------------CEEEEEESS
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCC--------------CEEEEEeCC
Confidence 57899986 999999999999876 899999875
No 471
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=79.96 E-value=1.6 Score=40.72 Aligned_cols=32 Identities=19% Similarity=0.245 Sum_probs=30.1
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.+++|+|+|..|..+|.+|.+.+ .+|++++.+
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g--------------~~v~vid~d 380 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKP--------------VPFILIDRQ 380 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CCEEEEECC
Confidence 79999999999999999999876 899999987
No 472
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=79.94 E-value=2.2 Score=36.36 Aligned_cols=32 Identities=19% Similarity=0.236 Sum_probs=28.4
Q ss_pred CeEEEEcc-CcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGg-G~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
++|+|.|| |++|-.++..|.+.+ .+|+++.+.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g--------------~~V~~~~r~ 46 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG--------------HDLVLIHRP 46 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT--------------CEEEEEECT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC--------------CEEEEEecC
Confidence 58999995 999999999999876 899999875
No 473
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=79.82 E-value=2.1 Score=37.63 Aligned_cols=33 Identities=15% Similarity=0.114 Sum_probs=29.0
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA 59 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~ 59 (283)
+.++|+|+|.|..|..+|..|.+.+ .+|++.+.
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~G--------------akVvv~D~ 204 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEG--------------AKLVVTDV 204 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECS
T ss_pred CcCEEEEECchHHHHHHHHHHHHCC--------------CEEEEEcC
Confidence 4589999999999999999999987 88887754
No 474
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=79.75 E-value=1.9 Score=39.03 Aligned_cols=23 Identities=30% Similarity=0.452 Sum_probs=19.1
Q ss_pred CeEEEEccCcHHHHHHHHHHHhh
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFI 37 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~ 37 (283)
.+|+|||||++|+.+|..|++.+
T Consensus 5 ~~~~iiG~G~~g~~~a~~l~~~g 27 (472)
T 1b37_A 5 PRVIVVGAGMSGISAAKRLSEAG 27 (472)
T ss_dssp CCEEEECCBHHHHHHHHHHHHTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcC
Confidence 57889999999998888888765
No 475
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=79.67 E-value=2.1 Score=38.52 Aligned_cols=34 Identities=24% Similarity=0.262 Sum_probs=30.2
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..++|+|||.|.+|..+|..|..++ .+|+++++.
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~G--------------a~Viv~D~~ 243 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFG--------------ARVVVTEVD 243 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCC--------------CEEEEECCC
Confidence 4589999999999999999999887 899998763
No 476
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=79.56 E-value=1.7 Score=39.76 Aligned_cols=33 Identities=18% Similarity=0.283 Sum_probs=29.6
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.++|.|||+|..|..+|..|+..+ .+|++++.+
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG--------------~~V~l~D~~ 37 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHG--------------HQVLLYDIS 37 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC--------------CeEEEEECC
Confidence 468999999999999999999877 899999765
No 477
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=79.54 E-value=2.2 Score=38.69 Aligned_cols=34 Identities=24% Similarity=0.170 Sum_probs=30.0
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..++|+|||.|.+|..+|..+..++ .+|++.+..
T Consensus 246 ~GKTVgVIG~G~IGr~vA~~lrafG--------------a~Viv~d~d 279 (464)
T 3n58_A 246 AGKVAVVCGYGDVGKGSAQSLAGAG--------------ARVKVTEVD 279 (464)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred cCCEEEEECcCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 5589999999999999999999887 899988653
No 478
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=79.19 E-value=1.3 Score=35.83 Aligned_cols=33 Identities=12% Similarity=0.306 Sum_probs=28.0
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEE-EeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTL-IEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~l-i~~~ 60 (283)
.++|.|||+|..|..+|..|.+.+ .+|++ ++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g--------------~~V~~v~~r~ 56 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQ--------------IPAIIANSRG 56 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTT--------------CCEEEECTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--------------CEEEEEECCC
Confidence 468999999999999999999876 78888 5543
No 479
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=79.18 E-value=1.4 Score=38.48 Aligned_cols=31 Identities=29% Similarity=0.332 Sum_probs=27.4
Q ss_pred eEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 16 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 16 ~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+|.|||+|..|..+|..|++.+ .+|+++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G--------------~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKC--------------REVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTE--------------EEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCC--------------CEEEEEECC
Confidence 8999999999999999998766 788888654
No 480
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=79.15 E-value=2.3 Score=36.88 Aligned_cols=34 Identities=12% Similarity=0.144 Sum_probs=30.0
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..++|.|||.|..|..+|..++..+ .+|+++++.
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G--------------~~V~~~d~~ 182 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFN--------------MRILYYSRT 182 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCC--------------CEEEEECCC
Confidence 4578999999999999999999877 899998765
No 481
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=79.11 E-value=2.5 Score=35.55 Aligned_cols=34 Identities=24% Similarity=0.259 Sum_probs=29.6
Q ss_pred ccCeEEEEc-cCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVG-GGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvG-gG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+.++++|+| +|.+|..+|..|++.+ .+|+++.+.
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G--------------~~V~i~~R~ 152 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEG--------------AEVVLCGRK 152 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTT--------------CEEEEEESS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCc--------------CEEEEEECC
Confidence 457899999 8999999999999887 789998774
No 482
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=79.09 E-value=2 Score=37.21 Aligned_cols=37 Identities=11% Similarity=0.241 Sum_probs=28.9
Q ss_pred HcccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeC
Q 023375 11 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA 59 (283)
Q Consensus 11 ~~~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~ 59 (283)
+++..+|+|||+|.+|..+|..|+...- -.++.|++.
T Consensus 6 ~~~~~KI~IiGaG~vG~~la~~l~~~~~------------~~el~L~Di 42 (326)
T 2zqz_A 6 DKDHQKVILVGDGAVGSSYAYAMVLQGI------------AQEIGIVDI 42 (326)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTC------------CSEEEEECS
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHcCCC------------CCEEEEEeC
Confidence 4555799999999999999998875431 148999965
No 483
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=79.08 E-value=2.2 Score=35.89 Aligned_cols=32 Identities=25% Similarity=0.453 Sum_probs=28.2
Q ss_pred CeEEEEcc-CcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGg-G~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
++|+|.|| |++|-.++..|.+.+ .+|+++.+.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g--------------~~V~~~~r~ 33 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELG--------------YEVVVVDNL 33 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--------------CEEEEECCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCC--------------CEEEEEeCC
Confidence 47999997 999999999999876 899998775
No 484
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=79.03 E-value=1.5 Score=37.56 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=29.8
Q ss_pred cccCeEEEEcc-CcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 12 SRLLHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 12 ~~~~~vvVvGg-G~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.+.++|+|.|| |.+|..++..|.+.+ .+|+++.+.
T Consensus 18 ~~~~~vlVTGasG~iG~~l~~~L~~~g--------------~~V~~~~r~ 53 (330)
T 2pzm_A 18 GSHMRILITGGAGCLGSNLIEHWLPQG--------------HEILVIDNF 53 (330)
T ss_dssp TTCCEEEEETTTSHHHHHHHHHHGGGT--------------CEEEEEECC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC--------------CEEEEEECC
Confidence 34468999997 999999999999876 889998874
No 485
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=79.03 E-value=2.4 Score=36.42 Aligned_cols=36 Identities=28% Similarity=0.318 Sum_probs=28.4
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
...+|+|||+|.+|..+|..|+..+. ..+|.+++.+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~------------~~ev~l~Di~ 40 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGI------------ADEIVLIDAN 40 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTC------------CSEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCC------------CCEEEEEeCC
Confidence 34699999999999999998876431 1489999764
No 486
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=79.00 E-value=2.3 Score=36.54 Aligned_cols=32 Identities=22% Similarity=0.249 Sum_probs=28.3
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCcc--EEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI--HVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~--~V~li~~~ 60 (283)
++|.|||.|..|-.+|..|...+ . +|++++++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G--------------~~~~V~~~dr~ 67 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSG--------------FKGKIYGYDIN 67 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTT--------------CCSEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC--------------CCCEEEEEECC
Confidence 68999999999999999999876 5 89988664
No 487
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=78.95 E-value=9 Score=31.33 Aligned_cols=34 Identities=24% Similarity=0.287 Sum_probs=29.0
Q ss_pred ccCeEEEEcc-----------------CcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGG-----------------GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGg-----------------G~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+.++|+|-|| |-.|..+|.+++..+ .+|+++.+.
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~G--------------a~V~lv~~~ 52 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAG--------------YEVCLITTK 52 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTT--------------CEEEEEECT
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCC--------------CEEEEEeCC
Confidence 3578888887 479999999999988 999999986
No 488
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=78.91 E-value=2.3 Score=36.56 Aligned_cols=36 Identities=17% Similarity=0.337 Sum_probs=28.2
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+..+|+|||+|.+|..+|..|+..+. -.+|.+++..
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~------------~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSI------------VDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCS------------CSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC------------CCEEEEEeCC
Confidence 45699999999999999999876431 1489999754
No 489
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=78.90 E-value=2.5 Score=34.63 Aligned_cols=37 Identities=22% Similarity=0.087 Sum_probs=30.3
Q ss_pred HHcccCeEEEEcc-CcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 10 EKSRLLHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 10 ~~~~~~~vvVvGg-G~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+..+.++++|.|| |.+|.++|..|++.+ .+|+++.++
T Consensus 15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G--------------~~V~~~~r~ 52 (249)
T 1o5i_A 15 LGIRDKGVLVLAASRGIGRAVADVLSQEG--------------AEVTICARN 52 (249)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred hccCCCEEEEECCCCHHHHHHHHHHHHCC--------------CEEEEEcCC
Confidence 3456678999985 899999999999877 899998775
No 490
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=78.84 E-value=4.1 Score=37.04 Aligned_cols=52 Identities=17% Similarity=0.271 Sum_probs=40.1
Q ss_pred ccCeEEEEccCcHHHH-HHHHHHHhhhhHHHhhcCCCCCccEEEEEeCCCCCCCCCHHHHHHHHHHHHhCCCEEEeC
Q 023375 13 RLLHCVVVGGGPTGVE-FSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG 88 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve-~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~~~l~~~~~~~~~~~~~~l~~~gV~v~~~ 88 (283)
+.++|.|||-|-+|+. +|..|.+.+ .+|+..+... .+. .+.|++.|+++..+
T Consensus 17 ~~~~i~viG~G~sG~s~~A~~l~~~G--------------~~V~~~D~~~-----~~~-----~~~l~~~gi~~~~g 69 (475)
T 1p3d_A 17 RVQQIHFIGIGGAGMSGIAEILLNEG--------------YQISGSDIAD-----GVV-----TQRLAQAGAKIYIG 69 (475)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHHT--------------CEEEEEESCC-----SHH-----HHHHHHTTCEEEES
T ss_pred cCCEEEEEeecHHHHHHHHHHHHhCC--------------CEEEEECCCC-----CHH-----HHHHHhCCCEEECC
Confidence 4578999999999998 888888877 8999988753 111 23577889999865
No 491
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=78.82 E-value=2.1 Score=35.36 Aligned_cols=35 Identities=11% Similarity=-0.031 Sum_probs=29.6
Q ss_pred cccCeEEEEcc-C-cHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 12 SRLLHCVVVGG-G-PTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 12 ~~~~~vvVvGg-G-~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
-+.++++|.|| | -+|.++|..|++.+ .+|+++.+.
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G--------------~~V~~~~r~ 56 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEG--------------ADVVISDYH 56 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCC--------------CEEEEecCC
Confidence 35678999998 7 49999999999887 899999764
No 492
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=78.81 E-value=1.9 Score=36.80 Aligned_cols=32 Identities=19% Similarity=0.124 Sum_probs=28.4
Q ss_pred CeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
++|.|||.|..|..+|..|...+ .+|+++++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g--------------~~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMG--------------HTVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhCC--------------CEEEEEeCC
Confidence 68999999999999999998766 789988765
No 493
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=78.72 E-value=2.6 Score=36.23 Aligned_cols=35 Identities=14% Similarity=0.179 Sum_probs=29.4
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
+.++++|+|+|-+|-.+|..|++.+. .+|+++.+.
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~-------------~~v~v~nRt 181 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGI-------------KEIKLFNRK 181 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-------------SEEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-------------CEEEEEECC
Confidence 35799999999999999999998761 389999775
No 494
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=78.59 E-value=2.1 Score=35.92 Aligned_cols=32 Identities=22% Similarity=0.419 Sum_probs=28.0
Q ss_pred CeEEEEcc-CcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGg-G~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
++|.|||+ |..|..+|..|...+ .+|+++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g--------------~~V~~~~r~ 44 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSA--------------HHLAAIEIA 44 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSS--------------SEEEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC--------------CEEEEEECC
Confidence 58999999 999999999998776 789988653
No 495
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=78.58 E-value=2.4 Score=36.87 Aligned_cols=32 Identities=16% Similarity=0.041 Sum_probs=28.5
Q ss_pred CeEEEEcc-CcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVGG-GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvGg-G~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
++|+|.|| |++|..++..|.+.+ .+|+++.+.
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g--------------~~V~~~~r~ 61 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKG--------------YEVHGLIRR 61 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--------------CEEEEEECC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCC--------------CEEEEEecC
Confidence 68999997 999999999999876 889998875
No 496
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=78.55 E-value=2.5 Score=33.65 Aligned_cols=32 Identities=19% Similarity=0.286 Sum_probs=27.5
Q ss_pred CeEEEEc-cCcHHHHHHHHHH-HhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 15 LHCVVVG-GGPTGVEFSGELS-DFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 15 ~~vvVvG-gG~~Gve~A~~L~-~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
++|+|.| +|.+|-++|..|. +.+ .+|+++.++
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g--------------~~V~~~~r~ 39 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTD--------------MHITLYGRQ 39 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCC--------------CEEEEEESS
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCC--------------ceEEEEecC
Confidence 4699999 5999999999999 665 899999875
No 497
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=78.50 E-value=2.2 Score=38.03 Aligned_cols=34 Identities=24% Similarity=0.263 Sum_probs=29.4
Q ss_pred ccCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCcc-EEEEEeCC
Q 023375 13 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEAN 60 (283)
Q Consensus 13 ~~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~-~V~li~~~ 60 (283)
..++|+|||+|.+|..+|..+...+ . +|+++++.
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G--------------~~~V~v~~r~ 200 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRG--------------VRAVLVANRT 200 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHC--------------CSEEEEECSS
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCC--------------CCEEEEEeCC
Confidence 5689999999999999999998776 5 89998664
No 498
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=78.50 E-value=1.7 Score=35.83 Aligned_cols=37 Identities=3% Similarity=-0.161 Sum_probs=31.0
Q ss_pred HHcccCeEEEEcc---CcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 10 EKSRLLHCVVVGG---GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 10 ~~~~~~~vvVvGg---G~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
...+.++++|.|| |.+|.++|..|++.+ .+|+++.+.
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G--------------~~V~~~~r~ 49 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKREG--------------AELAFTYVG 49 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHTT--------------CEEEEEESS
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHcC--------------CCEEEEecc
Confidence 3456689999996 589999999999887 899999775
No 499
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=78.41 E-value=2.4 Score=37.14 Aligned_cols=33 Identities=15% Similarity=0.185 Sum_probs=28.8
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
.++|.|||.|..|..+|..|++.+ .+|+++++.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G--------------~~V~v~dr~ 54 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGG--------------HECVVYDLN 54 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSC
T ss_pred CCEEEEECchHHHHHHHHHHHhCC--------------CEEEEEeCC
Confidence 368999999999999999999877 788888664
No 500
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=78.26 E-value=2.1 Score=39.07 Aligned_cols=35 Identities=26% Similarity=0.311 Sum_probs=29.1
Q ss_pred cCeEEEEccCcHHHHHHHHHHHhhhhHHHhhcCCCCCccEEEEEeCC
Q 023375 14 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 60 (283)
Q Consensus 14 ~~~vvVvGgG~~Gve~A~~L~~~~~~~~~~~~~~~~~~~~V~li~~~ 60 (283)
..+|.|||.|..|.-+|..|++.+. +.+|++++.+
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~------------g~~V~~~D~~ 43 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCP------------HITVTVVDMN 43 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCT------------TSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCC------------CCEEEEEECC
Confidence 3589999999999999999998721 1789999764
Done!