BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023384
(283 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QYO|A Chain A, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
pdb|2QYO|B Chain B, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
Length = 357
Score = 259 bits (662), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 129/286 (45%), Positives = 175/286 (61%), Gaps = 6/286 (2%)
Query: 1 MRLLVHSGCFK---KTKVNGQEEAYGLTAASTLLIKDKPYCLSPTVSVFVDPFFVAPYQS 57
MR L H+G F+ ++ +EEAY LT AS LL+K CL+P V +DP + +
Sbjct: 75 MRYLAHNGFFEIITNQELENEEEAYALTVASELLVKGTELCLAPMVECVLDPTLSTSFHN 134
Query: 58 LSSWFKGAELTLWETVHGIKFWEFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFE 117
L W +LTL+ G WEF+N+NP N +N+A+ASD++++ + +C +FE
Sbjct: 135 LKKWVYEEDLTLFAVNLGCDLWEFLNKNPEYNTLYNDALASDSKMIN--LAMKDCNLVFE 192
Query: 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPEADNLKYIAGDMFQFIPPA 177
GL S+VDVGGGNG+ +II E FP + C V D P VV NL ++NL Y+ GDMF +P A
Sbjct: 193 GLESIVDVGGGNGTTGKIICETFPKLTCVVFDRPKVVENLCGSNNLTYVGGDMFISVPKA 252
Query: 178 DAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAXXXXXXXXXXKFLF 237
DA L K V H D+D +KILKK + A+ S+G+RGKVI+ID+VIN K L
Sbjct: 253 DAVLLKAVLHDWTDKDCIKILKKCKEAVTSDGKRGKVIVIDMVINEKKDENQLTQIKLLM 312
Query: 238 DIVMSVNATGKERTESEWAKLFFDACFSHYKITPIFGMRFLIEIYP 283
++ +S GKER E EW KLF +A F YKI+P G+ LIEIYP
Sbjct: 313 NVTISC-VNGKERNEEEWKKLFIEAGFQDYKISPFTGLMSLIEIYP 357
>pdb|1FP2|A Chain A, Crystal Structure Analysis Of Isoflavone
O-Methyltransferase
Length = 352
Score = 258 bits (658), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 128/283 (45%), Positives = 175/283 (61%), Gaps = 5/283 (1%)
Query: 1 MRLLVHSGCFKKTKVNGQEEAYGLTAASTLLIKDKPYCLSPTVSVFVDPFFVAPYQSLSS 60
MR L H+G F+ + +EE+Y LT AS LL++ CL+P V +DP Y L
Sbjct: 75 MRYLAHNGFFEI--ITKEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKK 132
Query: 61 WFKGAELTLWETVHGIKFWEFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFEGLG 120
W +LTL+ G FW+F+++NP N FN+AMASD++++ + +C +F+GL
Sbjct: 133 WIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLIN--LALRDCDFVFDGLE 190
Query: 121 SLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPEADNLKYIAGDMFQFIPPADAF 180
S+VDVGGG G+ ++II E FP +KC V D P VV NL ++NL Y+ GDMF IP ADA
Sbjct: 191 SIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAV 250
Query: 181 LFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAXXXXXXXXXXKFLFDIV 240
L K + H D+D L+ILKK + A+ ++G+RGKV IID+VI+ K L D+
Sbjct: 251 LLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVN 310
Query: 241 MSVNATGKERTESEWAKLFFDACFSHYKITPIFGMRFLIEIYP 283
M+ GKER E EW KLF +A F HYKI+P+ G LIEIYP
Sbjct: 311 MAC-LNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352
>pdb|1FPX|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Isoflavone O-Methyltransferase
Length = 352
Score = 246 bits (629), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 124/282 (43%), Positives = 170/282 (60%), Gaps = 5/282 (1%)
Query: 2 RLLVHSGCFKKTKVNGQEEAYGLTAASTLLIKDKPYCLSPTVSVFVDPFFVAPYQSLSSW 61
R L H+G F+ + +EE+Y LT AS LL++ CL+P V +DP Y L W
Sbjct: 76 RYLAHNGFFEI--ITKEEESYALTVASELLVRGSDLCLAPXVECVLDPTLSGSYHELKKW 133
Query: 62 FKGAELTLWETVHGIKFWEFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFEGLGS 121
+LTL+ G FW+F+++NP N FN+A ASD++++ + +C +F+GL S
Sbjct: 134 IYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAXASDSKLIN--LALRDCDFVFDGLES 191
Query: 122 LVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPEADNLKYIAGDMFQFIPPADAFL 181
+VDVGGG G+ ++II E FP +KC V D P VV NL ++NL Y+ GD F IP ADA L
Sbjct: 192 IVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDXFTSIPNADAVL 251
Query: 182 FKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAXXXXXXXXXXKFLFDIVM 241
K + H D+D L+ILKK + A+ ++G+RGKV IID VI+ K L D+
Sbjct: 252 LKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDXVIDKKKDENQVTQIKLLXDVNX 311
Query: 242 SVNATGKERTESEWAKLFFDACFSHYKITPIFGMRFLIEIYP 283
+ GKER E EW KLF +A F HYKI+P+ G LIEIYP
Sbjct: 312 AC-LNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352
>pdb|1ZG3|A Chain A, Crystal Structure Of The Isoflavanone
4'-O-Methyltransferase Complexed With Sah And
2,7,4'-Trihydroxyisoflavanone
Length = 358
Score = 225 bits (573), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/292 (46%), Positives = 175/292 (59%), Gaps = 11/292 (3%)
Query: 1 MRLLVHSGCFKKTKVNGQEE------AYGLTAASTLLIKDKPYCLSPTVSVFVDPFFVAP 54
+RLL H+G F KT V G+E AY LT S LLI KP CLS V + P +
Sbjct: 69 LRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSSLDM 128
Query: 55 YQSLSSWF-KGAELTLWETVHGIKFWEFMNQNPGIN--QRFNEAMASDTEILTSFVVKAE 111
+ S WF + E TL+E G FW+F+N++ + F +AMASD+ + +V E
Sbjct: 129 WSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFK--LVLQE 186
Query: 112 CKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPEADNLKYIAGDMF 171
K++FEGL SLVDVGGG G ++++I E FP +KCTV D P VV NL +NL ++ GDMF
Sbjct: 187 NKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMF 246
Query: 172 QFIPPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAXXXXXXXX 231
+ IP ADA L K V H DE LKILK + AI+ G+ GKVIIIDI I+
Sbjct: 247 KSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLT 306
Query: 232 XXKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKITPIFGMRFLIEIYP 283
+ +D+VM GKERT+ EW KL +DA FS YKITPI G + LIE+YP
Sbjct: 307 ELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVYP 358
>pdb|1ZGA|A Chain A, Crystal Structure Of Isoflavanone 4'-o-methyltransferase
Complexed With (+)-6a-hydroxymaackiain
pdb|1ZHF|A Chain A, Crystal Structure Of Selenomethionine Substituted
Isoflavanone 4'-O- Methyltransferase
Length = 357
Score = 225 bits (573), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/292 (46%), Positives = 175/292 (59%), Gaps = 11/292 (3%)
Query: 1 MRLLVHSGCFKKTKVNGQEE------AYGLTAASTLLIKDKPYCLSPTVSVFVDPFFVAP 54
+RLL H+G F KT V G+E AY LT S LLI KP CLS V + P +
Sbjct: 68 LRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSSLDM 127
Query: 55 YQSLSSWF-KGAELTLWETVHGIKFWEFMNQNPGIN--QRFNEAMASDTEILTSFVVKAE 111
+ S WF + E TL+E G FW+F+N++ + F +AMASD+ + +V E
Sbjct: 128 WSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFK--LVLQE 185
Query: 112 CKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPEADNLKYIAGDMF 171
K++FEGL SLVDVGGG G ++++I E FP +KCTV D P VV NL +NL ++ GDMF
Sbjct: 186 NKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMF 245
Query: 172 QFIPPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAXXXXXXXX 231
+ IP ADA L K V H DE LKILK + AI+ G+ GKVIIIDI I+
Sbjct: 246 KSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLT 305
Query: 232 XXKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKITPIFGMRFLIEIYP 283
+ +D+VM GKERT+ EW KL +DA FS YKITPI G + LIE+YP
Sbjct: 306 ELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVYP 357
>pdb|1ZGJ|A Chain A, Crystal Structure Of Isoflavanone 4'-O-Methyltransferase
Complexed With (+)-Pisatin
Length = 354
Score = 225 bits (573), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/292 (46%), Positives = 175/292 (59%), Gaps = 11/292 (3%)
Query: 1 MRLLVHSGCFKKTKVNGQEE------AYGLTAASTLLIKDKPYCLSPTVSVFVDPFFVAP 54
+RLL H+G F KT V G+E AY LT S LLI KP CLS V + P +
Sbjct: 65 LRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSSLDM 124
Query: 55 YQSLSSWF-KGAELTLWETVHGIKFWEFMNQNPGIN--QRFNEAMASDTEILTSFVVKAE 111
+ S WF + E TL+E G FW+F+N++ + F +AMASD+ + +V E
Sbjct: 125 WSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFK--LVLQE 182
Query: 112 CKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPEADNLKYIAGDMF 171
K++FEGL SLVDVGGG G ++++I E FP +KCTV D P VV NL +NL ++ GDMF
Sbjct: 183 NKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMF 242
Query: 172 QFIPPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAXXXXXXXX 231
+ IP ADA L K V H DE LKILK + AI+ G+ GKVIIIDI I+
Sbjct: 243 KSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLT 302
Query: 232 XXKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKITPIFGMRFLIEIYP 283
+ +D+VM GKERT+ EW KL +DA FS YKITPI G + LIE+YP
Sbjct: 303 ELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVYP 354
>pdb|1FP1|D Chain D, Crystal Structure Analysis Of Chalcone O-Methyltransferase
Length = 372
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 127/260 (48%), Gaps = 18/260 (6%)
Query: 17 GQEEAYGLTAASTLLIKDKPYCLSPTVSVFV-DPFFVAPYQSLSSWFKGAELTLWETVHG 75
G E YGL+ L+ D+ + + F+ P + + + ++ L++ VHG
Sbjct: 109 GAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHG 168
Query: 76 IKFWEFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQI------FEGLGSLVDVGGGN 129
+ +EFM ++ +NQ FN++M V E K++ FEG+ +LVDVGGG+
Sbjct: 169 VTKYEFMGKDKKMNQIFNKSMVD--------VCATEMKRMLEIYTGFEGISTLVDVGGGS 220
Query: 130 GSLSRIISEAFPGIKCTVLDLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGL 189
G +I +P IK DLP V+ N P ++++ GDMF +P DA + K V H
Sbjct: 221 GRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNW 280
Query: 190 GDEDGLKILKKRRAAIASNGERGKVIIIDIVINAXXXXXXXXXXKFLFDIVMSVNATGKE 249
DE ++ L A++ N GKVII++ ++ D +M + G+E
Sbjct: 281 SDEKCIEFLSNCHKALSPN---GKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRE 337
Query: 250 RTESEWAKLFFDACFSHYKI 269
RTE ++ KL + FS +++
Sbjct: 338 RTEKQYEKLSKLSGFSKFQV 357
>pdb|1KYW|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|F Chain F, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYZ|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|E Chain E, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
Length = 365
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 128/268 (47%), Gaps = 17/268 (6%)
Query: 9 CFKKTKVNGQ-EEAYGLTAASTLLIKDKPYCLSPTVSVFVDPFFVAPYQSLSSWFKGAEL 67
C +T+ +G+ + YGL + L+K++ VS+ + SW+ +
Sbjct: 92 CSVRTQQDGKVQRLYGLATVAKYLVKNED-----GVSISALNLMNQDKVLMESWYHLKDA 146
Query: 68 TL-----WETVHGIKFWEFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFEGLGSL 122
L + +G+ +E+ +P N+ FN+ M+ + I ++ E FEGL SL
Sbjct: 147 VLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKIL--ETYTGFEGLKSL 204
Query: 123 VDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPEADNLKYIAGDMFQFIPPADAFLF 182
VDVGGG G++ I +P IK DLPHV+ + P ++++ GDMF IP ADA
Sbjct: 205 VDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFM 264
Query: 183 KLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAXXXXXXXXXXKFLFDIVM- 241
K + H DE LK LK A+ N GKVI+ + ++ D++M
Sbjct: 265 KWICHDWSDEHCLKFLKNCYEALPDN---GKVIVAECILPVAPDSSLATKGVVHIDVIML 321
Query: 242 SVNATGKERTESEWAKLFFDACFSHYKI 269
+ N GKERT+ E+ L A F +K+
Sbjct: 322 AHNPGGKERTQKEFEDLAKGAGFQGFKV 349
>pdb|3REO|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3REO|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3REO|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3REO|D Chain D, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|D Chain D, Monolignol O-Methyltransferase (Momt)
Length = 368
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 127/261 (48%), Gaps = 24/261 (9%)
Query: 19 EEAYGLTAASTLLIKDK------PYCLSPTVSVFVDPFFVAPYQSLSSWFKGAEL---TL 69
E YGL L K++ P+ L T V ++P+F + K A L
Sbjct: 106 ERLYGLAPVCKFLTKNEDGVSLAPFLLLATDKVLLEPWF---------YLKDAILEGGIP 156
Query: 70 WETVHGIKFWEFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFEGLGSLVDVGGGN 129
+ +G+ +++ + IN+ FN+ M+S++ I ++ E FEGL ++VDVGGG
Sbjct: 157 FNKAYGMNIFDYHGTDHRINKVFNKGMSSNSTITMKKIL--EMYNGFEGLTTIVDVGGGT 214
Query: 130 GSLSRIISEAFPGIKCTVLDLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGL 189
G+++ +I +P I DLPHV+ + P ++++ GDMF +P DA K + H
Sbjct: 215 GAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFDGVPKGDAIFIKWICHDW 274
Query: 190 GDEDGLKILKKRRAAIASNGERGKVIIIDIVINAXXXXXXXXXXKFLFDIVM-SVNATGK 248
DE LK+LK AA+ + GKVI+ + ++ D +M + N GK
Sbjct: 275 SDEHCLKLLKNCYAALP---DHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGK 331
Query: 249 ERTESEWAKLFFDACFSHYKI 269
ERTE E+ L + F +K+
Sbjct: 332 ERTEKEFQALAMASGFRGFKV 352
>pdb|3P9C|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Bound To
Sah
pdb|3P9I|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9K|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
Length = 364
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 116/229 (50%), Gaps = 11/229 (4%)
Query: 58 LSSWFKGAELTL-----WETVHGIKFWEFMNQNPGINQRFNEAMASDTEILTSFVVKAEC 112
+ SW+ + L + +G+ +E+ +P N+ FNE M + + I+T ++ E
Sbjct: 138 MESWYYLKDAVLDGGIPFNKAYGMSAFEYHGTDPRFNRVFNEGMKNHSIIITKKLL--EL 195
Query: 113 KQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPEADNLKYIAGDMFQ 172
FEGLG+LVDVGGG G+ I+ +P IK DLPHV++ P+ + ++ GDMF+
Sbjct: 196 YHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFK 255
Query: 173 FIPPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAXXXXXXXXX 232
+P D L K + H D+ +LK A+ ++ GKV+++ ++
Sbjct: 256 EVPSGDTILMKWILHDWSDQHCATLLKNCYDALPAH---GKVVLVQCILPVNPEANPSSQ 312
Query: 233 XKFLFDIVM-SVNATGKERTESEWAKLFFDACFSHYKITPIFGMRFLIE 280
F D++M + N G+ER E E+ L A F+ K T I+ + IE
Sbjct: 313 GVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKSTYIYANAWAIE 361
>pdb|1FPQ|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Chalcone O- Methyltransferase
Length = 372
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 121/260 (46%), Gaps = 18/260 (6%)
Query: 17 GQEEAYGLTAASTLLIKDKPYCLSPTVSVFVD-PFFVAPYQSLSSWFKGAELTLWETVHG 75
G E YGL+ L+ D+ + + F+ P + + + ++ L++ VHG
Sbjct: 109 GAERVYGLSXVGKYLVPDESRGYLASFTTFLCYPALLQVWXNFKEAVVDEDIDLFKNVHG 168
Query: 76 IKFWEFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQI------FEGLGSLVDVGGGN 129
+ +EF ++ NQ FN++ V E K+ FEG+ +LVDVGGG+
Sbjct: 169 VTKYEFXGKDKKXNQIFNKSXVD--------VCATEXKRXLEIYTGFEGISTLVDVGGGS 220
Query: 130 GSLSRIISEAFPGIKCTVLDLPHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGL 189
G +I +P IK DLP V+ N P ++++ GD F +P DA + K V H
Sbjct: 221 GRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDXFASVPQGDAXILKAVCHNW 280
Query: 190 GDEDGLKILKKRRAAIASNGERGKVIIIDIVINAXXXXXXXXXXKFLFDIVMSVNATGKE 249
DE ++ L A++ N GKVII++ ++ D + + G+E
Sbjct: 281 SDEKCIEFLSNCHKALSPN---GKVIIVEFILPEEPNTSEESKLVSTLDNLXFITVGGRE 337
Query: 250 RTESEWAKLFFDACFSHYKI 269
RTE ++ KL + FS +++
Sbjct: 338 RTEKQYEKLSKLSGFSKFQV 357
>pdb|3GWZ|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GXO|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
Length = 369
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 30/256 (11%)
Query: 17 GQEEAYGLTAASTLLIKDKPYCLSPTVSVFVDPFFVAPYQSLSSWFKGAELTLWETVHGI 76
G ++ + A S +L+ D ++ P+ ++ L+ + E + + +G
Sbjct: 105 GHDDLFAQNALSAVLLPDPASPVATDARFQAAPWHWRAWEQLTHSVRTGEASF-DVANGT 163
Query: 77 KFWEFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQI-----FEGLGSLVDVGGGNGS 131
FW+ +++P + FN A S V E Q+ F G + VD+GGG GS
Sbjct: 164 SFWQLTHEDPKARELFNRAXGS--------VSLTEAGQVAAAYDFSGAATAVDIGGGRGS 215
Query: 132 LSRIISEAFPGIKCTVLDLPHVVANLPE-------ADNLKYIAGDMFQFIPP-ADAFLFK 183
L + +AFPG++ T+L+ P V E AD + + GD F+ IP AD +L K
Sbjct: 216 LXAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFFETIPDGADVYLIK 275
Query: 184 LVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAXXXXXXXXXXKFLFDIVMSV 243
V H D+D ++IL RR A A + ++++ID +I+ D+++ V
Sbjct: 276 HVLHDWDDDDVVRIL--RRIATAXKPD-SRLLVIDNLID-----ERPAASTLFVDLLLLV 327
Query: 244 NATGKERTESEWAKLF 259
G ER+ESE+A L
Sbjct: 328 LVGGAERSESEFAALL 343
>pdb|3LST|A Chain A, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
pdb|3LST|B Chain B, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
Length = 348
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 100/248 (40%), Gaps = 16/248 (6%)
Query: 22 YGLTAASTLLIKDKPYCLSPTVSVFVDPFFVAPYQSLSSWFKGAELTLWETVHGIKFWEF 81
+ LT L D P + F D F ++S G E + + G +
Sbjct: 92 FALTDKGAALRSDSPVPARAGILXFTDTXFWTXSHRVASAL-GPERPAFADIFGSSLDAY 150
Query: 82 MNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFP 141
+ + + + E +T ++ A F G++ DVGGG G + P
Sbjct: 151 FDGDAEVEALYYEGX--ETVSAAEHLILARAGD-FPATGTVADVGGGRGGFLLTVLREHP 207
Query: 142 GIKCTVLDLPHVVA----NLPE-ADNLKYIAGDMFQFIPPADAFLFKLVFHGLGDEDGLK 196
G++ +LD VVA + P+ A K + GD + +P AD + K + H GDED ++
Sbjct: 208 GLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREVPHADVHVLKRILHNWGDEDSVR 267
Query: 197 ILKKRRAAIASNGERGKVIIIDIVINAXXXXXXXXXXKFLFDIVMSVNATGKERTESEWA 256
IL R ++ G+V++ID V+ F TG+ERT +E
Sbjct: 268 ILTNCRRVXPAH---GRVLVIDAVVPEGNDAHQSKEXDF----XXLAARTGQERTAAELE 320
Query: 257 KLFFDACF 264
LF A
Sbjct: 321 PLFTAAGL 328
>pdb|2IP2|A Chain A, Structure Of The Pyocyanin Biosynthetic Protein Phzm
pdb|2IP2|B Chain B, Structure Of The Pyocyanin Biosynthetic Protein Phzm
Length = 334
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 121/281 (43%), Gaps = 29/281 (10%)
Query: 1 MRLLVHSGCFKKTKVNGQEEAYGLTAASTLLIKDKPYCLSPTVSVFVDPFFVAPYQSLSS 60
MRLLV F+ +G Y T S LL +D V + + F A + +
Sbjct: 62 MRLLVAFEIFQGDTRDG----YANTPTSHLL-RDVEGSFRDMVLFYGEEFHAAWTPACEA 116
Query: 61 WFKGAELTLWETVHGIKFWEFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFEGLG 120
G +E G F+ ++ + P +RF AM + S + E ++ + G
Sbjct: 117 LLSGT--PGFELAFGEDFYSYLKRCPDAGRRFLLAMKA------SNLAFHEIPRLLDFRG 168
Query: 121 -SLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHV-------VANLPEADNLKYIAGDMFQ 172
S VDVGGG+G L++ I +A P + +LD +++L + + + GDM Q
Sbjct: 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQ 228
Query: 173 FIPP-ADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAXXXXXXXX 231
+P D +L + L + L++L R A+A + G+V++I+ I+A
Sbjct: 229 EVPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGD---GRVVVIERTISA----SEPS 281
Query: 232 XXKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKITPI 272
L+D+ + + G+ RT E L F+ +I +
Sbjct: 282 PMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIVDL 322
>pdb|4A6D|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam
pdb|4A6E|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam And
N-Acetylserotonin
Length = 353
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 122 LVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVA------NLPEADNLKYIAGDMFQF-I 174
+ D+GGG G+L++ +PG K TV D+P VV + E + + + GD F+ +
Sbjct: 183 MCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPL 242
Query: 175 PPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAXXXXXXXXXXK 234
P AD ++ V H D +L++ G +++I+ +++
Sbjct: 243 PEADLYILARVLHDWADGKCSHLLERIYHTCKPG---GGILVIESLLDEDRRGPLLTQ-- 297
Query: 235 FLFDIVMSVNATGKERTESEWAKLFFDACFSHYK 268
L+ + M V G+ERT + + L A F ++
Sbjct: 298 -LYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQ 330
>pdb|1X19|A Chain A, Crystal Structure Of Bchu Involved In Bacteriochlorophyll
C Biosynthesis
pdb|1X1A|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Methionine
pdb|1X1B|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine
pdb|1X1C|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn2+
pdb|1X1D|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn-Bacteriopheophorbide D
Length = 359
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 85/168 (50%), Gaps = 18/168 (10%)
Query: 67 LTLWETVHGIKFWEFMNQNPGI----NQRFNEAMASDTEILTSFVVKAECKQIFEGLGSL 122
+ L + V G K ++ P + N F E S+ + +++ E K +G+ +
Sbjct: 138 MGLSQAVRGQKNFKGQVPYPPVTREDNLYFEEIHRSNAKFAIQLLLE-EAK--LDGVKKM 194
Query: 123 VDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPE-------ADNLKYIAGDMF-QFI 174
+DVGGG G +S + + FP + T+L+LP + + E AD ++ IA D++ +
Sbjct: 195 IDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKESY 254
Query: 175 PPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVIN 222
P ADA LF + + ++ + KK A+ S G+++I+D+VI+
Sbjct: 255 PEADAVLFCRILYSANEQLSTIMCKKAFDAMRSG---GRLLILDMVID 299
>pdb|1QZZ|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Methionine (Sam)
pdb|1R00|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Homocystein (Sah)
Length = 374
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 74 HGIKFWEFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFEGLGSLVDVGGGNGSLS 133
+G FWE ++ + + F+ M+ D ++ ++ A+ + + ++DVGGGNG +
Sbjct: 141 YGRPFWEDLSADVALADSFDALMSCDEDL--AYEAPADAYD-WSAVRHVLDVGGGNGGML 197
Query: 134 RIISEAFPGIKCTVLDLP-------HVVANLPEADNLKYIAGDMFQFIP-PADAFLFKLV 185
I+ P ++ T+++L A+ AD + GD F+ +P AD L V
Sbjct: 198 AAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSFV 257
Query: 186 FHGLGDEDGLKILKKRRAAIASNGERGKVIIID 218
DED L IL R + + G+++++D
Sbjct: 258 LLNWSDEDALTIL---RGCVRALEPGGRLLVLD 287
>pdb|1TW2|A Chain A, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW2|B Chain B, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW3|A Chain A, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
pdb|1TW3|B Chain B, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
Length = 360
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 11/149 (7%)
Query: 70 WETVHGIKFWEFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFEGLGSLVDVGGGN 129
+E+++G F+E + P + F+ +A D ++ +F A + + ++DVGGG
Sbjct: 138 YESIYGKPFYEDLAGRPDLRASFDSLLACDQDV--AFDAPAAAYD-WTNVRHVLDVGGGK 194
Query: 130 GSLSRIISEAFPGIKCTVLDLPHVVANLPE-------ADNLKYIAGDMFQFIP-PADAFL 181
G + I+ P + TVL++ V +D + + GD F+ +P ADA +
Sbjct: 195 GGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAII 254
Query: 182 FKLVFHGLGDEDGLKILKKRRAAIASNGE 210
V D D ++IL + A+ G
Sbjct: 255 LSFVLLNWPDHDAVRILTRCAEALEPGGR 283
>pdb|3DTN|A Chain A, Crystal Structure Of Putative Methyltransferase-mm_2633
From Methanosarcina Mazei .
pdb|3DTN|B Chain B, Crystal Structure Of Putative Methyltransferase-mm_2633
From Methanosarcina Mazei
Length = 234
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 122 LVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPEAD-----NLKYIAGDM--FQFI 174
++D+G G G LS + E +P T++D+ + + + +KYI D + F
Sbjct: 48 ILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE 107
Query: 175 PPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNG 209
D + L H L DED ++ K+ + + +G
Sbjct: 108 EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESG 142
>pdb|1XDS|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDS|B Chain B, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDU|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With Sinefungin (Sfg)
Length = 374
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 74 HGIKFWEFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFEGLGSLVDVGGGNGSLS 133
+G FWE ++ + + F+ + D ++ ++ A+ + + ++DVGGGNG
Sbjct: 141 YGRPFWEDLSADVALADSFDALXSCDEDL--AYEAPADAYD-WSAVRHVLDVGGGNGGXL 197
Query: 134 RIISEAFPGIKCTVLDLP-------HVVANLPEADNLKYIAGDMFQFIP-PADAFLFKLV 185
I+ P ++ T+++L A+ AD + GD F+ +P AD L V
Sbjct: 198 AAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSFV 257
Query: 186 FHGLGDEDGLKILKKRRAAIASNGERGKVIIID 218
DED L IL R + + G+++++D
Sbjct: 258 LLNWSDEDALTIL---RGCVRALEPGGRLLVLD 287
>pdb|2CDH|4 Chain 4, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|5 Chain 5, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|6 Chain 6, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|7 Chain 7, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|8 Chain 8, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|9 Chain 9, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|M Chain M, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|N Chain N, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|O Chain O, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|P Chain P, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|Q Chain Q, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|R Chain R, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution
Length = 305
Score = 30.8 bits (68), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 10/73 (13%)
Query: 88 INQRFNEAMASDTEILTSFVVKAE-------CKQIFEGLG--SLVDVGGGNGSLSRIISE 138
++ + A+AS TE+L V + C + F+ LG ++++V G G+L+ +
Sbjct: 220 VSNKDGRAVASGTEVLDRLVGQVANPVRWDLCMETFKELGVTAIIEVCPG-GTLTGLAKR 278
Query: 139 AFPGIKCTVLDLP 151
A PG+K L P
Sbjct: 279 ALPGVKTLALKTP 291
>pdb|2CF2|B Chain B, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|K Chain K, Architecture Of Mammalian Fatty Acid Synthase
Length = 304
Score = 30.8 bits (68), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 10/73 (13%)
Query: 88 INQRFNEAMASDTEILTSFVVKAE-------CKQIFEGLG--SLVDVGGGNGSLSRIISE 138
++ + A+AS TE+L V + C + F+ LG ++++V G G+L+ +
Sbjct: 219 VSNKDGRAVASGTEVLDRLVGQVANPVRWDLCMETFKELGVTAIIEVCPG-GTLTGLAKR 277
Query: 139 AFPGIKCTVLDLP 151
A PG+K L P
Sbjct: 278 ALPGVKTLALKTP 290
>pdb|1NM2|A Chain A, "malonyl-Coa:acp Transacylase"
Length = 317
Score = 30.8 bits (68), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 10/73 (13%)
Query: 88 INQRFNEAMASDTEILTSFVVKAE-------CKQIFEGLG--SLVDVGGGNGSLSRIISE 138
++ + A+AS TE+L V + C + F+ LG ++++V G G+L+ +
Sbjct: 230 VSNKDGRAVASGTEVLDRLVGQVANPVRWDLCMETFKELGVTAIIEVCPG-GTLTGLAKR 288
Query: 139 AFPGIKCTVLDLP 151
A PG+K L P
Sbjct: 289 ALPGVKTLALKTP 301
>pdb|3I53|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I53|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I58|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I58|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I5U|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I5U|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I64|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
pdb|3I64|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
Length = 332
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 74 HGIKFWEFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFEGLGSLVDVGGGNGSLS 133
+G FWE + +P ++ F+ M+ E+ + + K + LG +VDVGGG+G L
Sbjct: 128 YGTSFWEDLGSDPVLSASFDTLMSHHLELDYTGIA---AKYDWAALGHVVDVGGGSGGLL 184
Query: 134 RIISEAFPGIKCTVLDL--PHVVANLPEADN-----LKYIAGDMFQFIPP-ADAFLFKLV 185
+ A + TVLDL P A+ D + + G F +P A ++ V
Sbjct: 185 SALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGAGGYVLSAV 244
Query: 186 FHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAXXXXXXXXXXKFLFDIVMSVNA 245
H D + IL RR A A+ G G V++I+ V D+ M
Sbjct: 245 LHDWDDLSAVAIL--RRCAEAA-GSGGVVLVIEAVAGDEHAGTG-------MDLRMLTYF 294
Query: 246 TGKERTESEWAKLFFDACFSHYKITPI 272
GKER+ +E +L A + PI
Sbjct: 295 GGKERSLAELGELAAQAGLAVRAAHPI 321
>pdb|4DZR|A Chain A, The Crystal Structure Of Protein-(Glutamine-N5)
Methyltransferase (Release Factor-Specific) From
Alicyclobacillus Acidocaldarius Subsp. Acidocaldarius
Dsm 446
Length = 215
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 99 DTEILTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL 150
DTE+L ++ K+ G ++DVG G+G ++ I+ A PG+ T +DL
Sbjct: 13 DTEVLVEEAIRF-LKRXPSGT-RVIDVGTGSGCIAVSIALACPGVSVTAVDL 62
>pdb|1JII|A Chain A, Crystal Structure Of S. Aureus Tyrrs In Complex With
Sb-219383
pdb|1JIJ|A Chain A, Crystal Structure Of S. Aureus Tyrrs In Complex With
Sb-239629
pdb|1JIK|A Chain A, Crystal Structure Of S. Aureus Tyrrs In Complex With
Sb-243545
pdb|1JIL|A Chain A, Crystal Structure Of S. Aureus Tyrrs In Complex With
Sb284485
Length = 420
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 5 VHSGCFKKTKVNGQEEAYGLTAASTLLIKDKPYCLSPTVSVFVDPFFVAPYQSLSSWFKG 64
+ SG ++ GQ +AYGLT K + S + +V++D +PY+ W
Sbjct: 200 ITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAVWLDAEKTSPYEFYQFWINQ 259
Query: 65 AELTLWETVHGIKFWEFMNQNP--GINQRFNEA 95
++ + + +K++ F+ + + Q NEA
Sbjct: 260 SD---EDVIKFLKYFTFLGKEEIDRLEQSKNEA 289
>pdb|3FTC|A Chain A, Crystal Structure Of A. Aeolicus Ksga At 1.72-Angstrom
Resolution
pdb|3FTD|A Chain A, Crystal Structure Of A. Aeolicus Ksga At 1.44-Angstrom
Resolution
pdb|3FTE|A Chain A, Crystal Structure Of A. Aeolicus Ksga In Complex With Rna
pdb|3FTF|A Chain A, Crystal Structure Of A. Aeolicus Ksga In Complex With Rna
And Sah
Length = 249
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 110 AECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPEADNLKYIAGD 169
AE I EG ++V+VGGG G+L++++ + P K V++L + +NLK I +
Sbjct: 24 AEELNIEEG-NTVVEVGGGTGNLTKVLLQ-HPLKKLYVIELDREM-----VENLKSIGDE 76
Query: 170 MFQFIPPADAFLFKLVFHGLGDE 192
+ I DA F F LG E
Sbjct: 77 RLEVI-NEDASKFP--FCSLGKE 96
>pdb|3R9X|B Chain B, Crystal Structure Of Era In Complex With Mggdpnp,
Nucleotides 1506- 1542 Of 16s Ribosomal Rna, And Ksga
Length = 248
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 110 AECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPEADNLKYIAGD 169
AE I EG ++V+VGGG G+L++++ + P K V++L + +NLK I +
Sbjct: 23 AEELNIEEG-NTVVEVGGGTGNLTKVLLQ-HPLKKLYVIELDREM-----VENLKSIGDE 75
Query: 170 MFQFIPPADAFLFKLVFHGLGDE 192
+ I DA F F LG E
Sbjct: 76 RLEVI-NEDASKFP--FCSLGKE 95
>pdb|4DCM|A Chain A, Crystal Structure Of Methyltransferase Rlmg Modifying
G1835 Of 23s Rrna In Escherichia Coli
Length = 375
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 21/109 (19%)
Query: 120 GSLVDVGGGNGSLSRIISEAFPGIKCTVLD-LPHVVA--------NLPEA-DNLKYIAGD 169
G +VD+G GNG + + + P K +D P VA N PEA D ++ +
Sbjct: 224 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPXAVASSRLNVETNXPEALDRCEFXINN 283
Query: 170 MFQFIPPADAFLFKLVF--------HGLGDEDGLKILKKRRAAIASNGE 210
+ P F F V H L D + R + NGE
Sbjct: 284 ALSGVEP---FRFNAVLCNPPFHQQHALTDNVAWEXFHHARRCLKINGE 329
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.140 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,045,203
Number of Sequences: 62578
Number of extensions: 316235
Number of successful extensions: 751
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 701
Number of HSP's gapped (non-prelim): 33
length of query: 283
length of database: 14,973,337
effective HSP length: 98
effective length of query: 185
effective length of database: 8,840,693
effective search space: 1635528205
effective search space used: 1635528205
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (24.3 bits)