Query 023384
Match_columns 283
No_of_seqs 231 out of 2311
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 05:52:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023384.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023384hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a6d_A Hydroxyindole O-methylt 100.0 1.4E-49 4.9E-54 350.3 22.1 271 1-283 64-345 (353)
2 3p9c_A Caffeic acid O-methyltr 100.0 4.3E-46 1.5E-50 329.4 27.7 277 1-283 82-364 (364)
3 3reo_A (ISO)eugenol O-methyltr 100.0 3.8E-45 1.3E-49 323.9 26.1 277 1-283 84-366 (368)
4 3lst_A CALO1 methyltransferase 100.0 4.7E-44 1.6E-48 314.9 24.6 267 1-283 76-347 (348)
5 3gwz_A MMCR; methyltransferase 100.0 1.2E-43 4.1E-48 314.5 20.8 267 1-283 92-368 (369)
6 1fp2_A Isoflavone O-methyltran 100.0 1.6E-42 5.6E-47 305.5 26.7 277 1-283 75-352 (352)
7 1zg3_A Isoflavanone 4'-O-methy 100.0 1.1E-42 3.6E-47 307.4 25.5 281 1-283 69-358 (358)
8 3i53_A O-methyltransferase; CO 100.0 1.2E-43 4.1E-48 310.4 18.7 264 1-283 59-331 (332)
9 1fp1_D Isoliquiritigenin 2'-O- 100.0 7E-42 2.4E-46 303.6 23.8 276 1-283 89-372 (372)
10 2ip2_A Probable phenazine-spec 100.0 5.4E-42 1.8E-46 300.2 21.4 264 1-283 62-333 (334)
11 1tw3_A COMT, carminomycin 4-O- 100.0 2.8E-39 9.7E-44 285.7 19.9 268 1-283 73-355 (360)
12 1qzz_A RDMB, aclacinomycin-10- 100.0 3.2E-39 1.1E-43 286.7 19.1 268 1-283 70-355 (374)
13 3dp7_A SAM-dependent methyltra 100.0 9.4E-39 3.2E-43 282.5 18.5 265 1-283 71-354 (363)
14 2r3s_A Uncharacterized protein 100.0 4.4E-37 1.5E-41 269.0 21.3 263 1-282 60-333 (335)
15 3mcz_A O-methyltransferase; ad 100.0 6.5E-37 2.2E-41 269.7 21.4 258 1-283 77-348 (352)
16 1x19_A CRTF-related protein; m 100.0 1.9E-36 6.5E-41 267.5 20.0 253 1-283 85-358 (359)
17 4gek_A TRNA (CMO5U34)-methyltr 99.9 2.9E-22 9.9E-27 168.7 19.0 164 116-283 68-256 (261)
18 3dtn_A Putative methyltransfer 99.9 2.3E-20 7.7E-25 154.5 17.9 163 117-283 43-225 (234)
19 3dh0_A SAM dependent methyltra 99.8 4.2E-19 1.4E-23 145.4 16.4 155 105-283 27-192 (219)
20 3pfg_A N-methyltransferase; N, 99.8 5.6E-19 1.9E-23 148.8 15.4 163 116-283 48-248 (263)
21 1ve3_A Hypothetical protein PH 99.8 2.3E-19 7.9E-24 147.6 12.3 161 116-283 36-226 (227)
22 3hnr_A Probable methyltransfer 99.8 4.8E-19 1.6E-23 145.1 14.1 162 116-283 43-211 (220)
23 3dlc_A Putative S-adenosyl-L-m 99.8 2.2E-19 7.4E-24 146.7 10.8 153 121-280 46-211 (219)
24 3ou2_A SAM-dependent methyltra 99.8 5.1E-18 1.7E-22 138.5 18.3 152 116-274 44-206 (218)
25 3bxo_A N,N-dimethyltransferase 99.8 2.9E-18 1E-22 142.0 16.0 163 116-283 38-238 (239)
26 3bus_A REBM, methyltransferase 99.8 4.5E-18 1.5E-22 143.9 16.2 155 105-272 51-216 (273)
27 3ujc_A Phosphoethanolamine N-m 99.8 2.3E-18 8E-23 144.8 14.2 146 116-272 53-206 (266)
28 1vl5_A Unknown conserved prote 99.8 2.4E-18 8.1E-23 144.7 13.5 153 104-272 26-190 (260)
29 1xtp_A LMAJ004091AAA; SGPP, st 99.8 1.9E-18 6.4E-23 144.6 12.3 141 116-273 91-239 (254)
30 2o57_A Putative sarcosine dime 99.8 8.2E-18 2.8E-22 144.1 16.0 144 116-272 80-234 (297)
31 1nkv_A Hypothetical protein YJ 99.8 6.9E-18 2.4E-22 141.4 14.8 152 105-272 26-187 (256)
32 3ocj_A Putative exported prote 99.8 3E-18 1E-22 147.5 11.9 164 116-283 116-303 (305)
33 3h2b_A SAM-dependent methyltra 99.8 4.7E-18 1.6E-22 137.5 12.2 145 119-281 42-192 (203)
34 3l8d_A Methyltransferase; stru 99.8 3.2E-17 1.1E-21 136.0 16.8 143 116-272 51-200 (242)
35 1xxl_A YCGJ protein; structura 99.8 1.3E-17 4.3E-22 138.6 14.1 153 105-272 11-174 (239)
36 1kpg_A CFA synthase;, cyclopro 99.8 1.4E-17 4.8E-22 142.0 14.6 160 105-272 54-228 (287)
37 3mgg_A Methyltransferase; NYSG 99.7 6.1E-18 2.1E-22 143.4 11.6 152 116-272 35-198 (276)
38 2qe6_A Uncharacterized protein 99.7 2.6E-17 8.9E-22 139.5 15.3 140 118-268 77-238 (274)
39 3vc1_A Geranyl diphosphate 2-C 99.7 4.6E-17 1.6E-21 140.6 16.5 162 96-272 97-269 (312)
40 3g2m_A PCZA361.24; SAM-depende 99.7 1.8E-17 6.2E-22 142.2 13.5 160 118-282 82-290 (299)
41 3i9f_A Putative type 11 methyl 99.7 8.5E-18 2.9E-22 132.1 10.2 141 116-282 15-158 (170)
42 3lcc_A Putative methyl chlorid 99.7 2E-17 6.9E-22 136.9 12.2 131 120-273 68-208 (235)
43 3dli_A Methyltransferase; PSI- 99.7 5.9E-17 2E-21 134.5 15.1 141 116-273 39-185 (240)
44 2ex4_A Adrenal gland protein A 99.7 1.9E-17 6.6E-22 137.6 11.9 138 118-273 79-226 (241)
45 3f4k_A Putative methyltransfer 99.7 3.1E-17 1.1E-21 137.5 13.2 143 116-273 44-197 (257)
46 3hem_A Cyclopropane-fatty-acyl 99.7 4E-17 1.4E-21 140.2 14.2 162 105-273 62-244 (302)
47 4fsd_A Arsenic methyltransfera 99.7 4.4E-17 1.5E-21 144.6 14.7 144 117-271 82-250 (383)
48 2fk8_A Methoxy mycolic acid sy 99.7 4.2E-17 1.5E-21 141.1 14.2 161 105-272 80-254 (318)
49 3jwg_A HEN1, methyltransferase 99.7 6.8E-17 2.3E-21 132.2 13.9 143 116-268 27-188 (219)
50 1y8c_A S-adenosylmethionine-de 99.7 9.1E-17 3.1E-21 133.4 14.8 160 118-283 37-244 (246)
51 3e23_A Uncharacterized protein 99.7 4.6E-17 1.6E-21 132.5 12.5 138 116-272 41-182 (211)
52 3kkz_A Uncharacterized protein 99.7 3.1E-17 1.1E-21 138.4 11.8 143 116-273 44-197 (267)
53 3g5l_A Putative S-adenosylmeth 99.7 6.1E-17 2.1E-21 135.4 13.2 149 117-272 43-216 (253)
54 3gu3_A Methyltransferase; alph 99.7 4.8E-17 1.6E-21 138.6 12.7 151 116-271 20-189 (284)
55 3sm3_A SAM-dependent methyltra 99.7 8.1E-17 2.8E-21 132.8 13.1 148 116-271 28-206 (235)
56 2p7i_A Hypothetical protein; p 99.7 5.5E-17 1.9E-21 134.9 11.7 147 117-271 41-198 (250)
57 3bkw_A MLL3908 protein, S-aden 99.7 3E-16 1E-20 130.1 15.8 151 116-272 41-214 (243)
58 3ege_A Putative methyltransfer 99.7 2.4E-16 8.3E-21 132.6 15.1 150 105-272 24-178 (261)
59 1pjz_A Thiopurine S-methyltran 99.7 6.9E-17 2.4E-21 130.9 11.3 134 116-272 20-176 (203)
60 3d2l_A SAM-dependent methyltra 99.7 3.4E-16 1.2E-20 129.9 15.6 161 116-283 31-242 (243)
61 3jwh_A HEN1; methyltransferase 99.7 9.9E-17 3.4E-21 131.1 11.7 140 116-268 27-188 (217)
62 2p35_A Trans-aconitate 2-methy 99.7 1.4E-16 4.8E-21 133.5 12.6 153 106-266 24-184 (259)
63 2xvm_A Tellurite resistance pr 99.7 3.4E-16 1.2E-20 125.8 14.1 134 116-271 30-172 (199)
64 3ccf_A Cyclopropane-fatty-acyl 99.7 1.5E-16 5.1E-21 135.1 12.4 158 105-272 47-210 (279)
65 1vlm_A SAM-dependent methyltra 99.7 6.5E-16 2.2E-20 126.5 15.8 137 119-272 48-188 (219)
66 3e8s_A Putative SAM dependent 99.7 1.7E-16 6E-21 130.0 12.1 152 106-271 43-208 (227)
67 3cgg_A SAM-dependent methyltra 99.7 5.9E-16 2E-20 123.7 14.6 126 116-272 44-175 (195)
68 3g07_A 7SK snRNA methylphospha 99.7 3.6E-17 1.2E-21 139.9 7.6 147 116-272 44-269 (292)
69 4htf_A S-adenosylmethionine-de 99.7 3.2E-16 1.1E-20 133.4 12.1 149 118-273 68-233 (285)
70 3bkx_A SAM-dependent methyltra 99.7 7.8E-16 2.7E-20 130.2 13.4 158 106-272 34-219 (275)
71 3ggd_A SAM-dependent methyltra 99.7 4.3E-16 1.5E-20 129.6 11.1 149 116-271 54-218 (245)
72 2zfu_A Nucleomethylin, cerebra 99.6 4.1E-15 1.4E-19 121.2 14.2 123 116-283 65-190 (215)
73 3cc8_A Putative methyltransfer 99.6 2E-15 7E-20 123.8 12.3 144 117-272 31-185 (230)
74 2gb4_A Thiopurine S-methyltran 99.6 2.8E-15 9.7E-20 125.3 12.8 132 117-271 67-226 (252)
75 2yqz_A Hypothetical protein TT 99.6 2.9E-15 9.9E-20 125.7 12.9 144 116-269 37-193 (263)
76 4hg2_A Methyltransferase type 99.6 5.9E-15 2E-19 123.7 13.7 98 117-222 38-139 (257)
77 3m70_A Tellurite resistance pr 99.6 5.8E-15 2E-19 125.7 14.0 133 116-270 118-258 (286)
78 1wzn_A SAM-dependent methyltra 99.6 3.3E-14 1.1E-18 118.6 17.9 95 117-216 40-143 (252)
79 3thr_A Glycine N-methyltransfe 99.6 1.9E-15 6.5E-20 129.0 10.0 99 116-219 55-176 (293)
80 2i62_A Nicotinamide N-methyltr 99.6 1.7E-15 5.9E-20 127.2 9.5 150 117-283 55-260 (265)
81 2p8j_A S-adenosylmethionine-de 99.6 2E-15 6.9E-20 122.4 9.5 149 116-269 21-180 (209)
82 1ri5_A MRNA capping enzyme; me 99.6 4.9E-15 1.7E-19 126.6 12.1 153 116-272 62-250 (298)
83 3grz_A L11 mtase, ribosomal pr 99.6 8.6E-15 2.9E-19 118.5 12.9 131 116-283 58-196 (205)
84 2aot_A HMT, histamine N-methyl 99.6 8.1E-15 2.8E-19 125.3 12.9 140 118-269 52-218 (292)
85 2a14_A Indolethylamine N-methy 99.6 3.3E-15 1.1E-19 125.8 9.1 150 117-283 54-259 (263)
86 3g5t_A Trans-aconitate 3-methy 99.6 1.2E-14 4.2E-19 124.5 12.6 141 117-265 35-197 (299)
87 3q87_B N6 adenine specific DNA 99.6 7.6E-14 2.6E-18 109.7 15.6 126 117-280 22-158 (170)
88 4e2x_A TCAB9; kijanose, tetron 99.6 1.3E-14 4.5E-19 130.0 12.7 151 103-273 95-254 (416)
89 1fbn_A MJ fibrillarin homologu 99.6 3.2E-14 1.1E-18 117.3 12.1 141 116-283 72-227 (230)
90 3e05_A Precorrin-6Y C5,15-meth 99.6 1E-13 3.6E-18 112.0 14.9 123 107-269 32-164 (204)
91 2kw5_A SLR1183 protein; struct 99.5 5.8E-14 2E-18 113.2 12.3 135 116-272 28-171 (202)
92 3giw_A Protein of unknown func 99.5 9.4E-14 3.2E-18 116.1 13.6 142 117-268 77-243 (277)
93 2g72_A Phenylethanolamine N-me 99.5 2.1E-14 7.1E-19 122.5 9.9 138 118-272 71-256 (289)
94 2b3t_A Protein methyltransfera 99.5 2.1E-13 7.1E-18 115.6 15.6 135 117-283 108-275 (276)
95 2gs9_A Hypothetical protein TT 99.5 1.1E-13 3.8E-18 112.2 12.5 136 117-270 35-176 (211)
96 3mq2_A 16S rRNA methyltransfer 99.5 7.9E-14 2.7E-18 113.8 11.3 142 116-272 25-184 (218)
97 1dus_A MJ0882; hypothetical pr 99.5 4.8E-13 1.6E-17 106.6 14.0 133 116-283 50-193 (194)
98 3ofk_A Nodulation protein S; N 99.5 9.8E-14 3.3E-18 113.0 10.0 99 116-219 49-155 (216)
99 3p2e_A 16S rRNA methylase; met 99.5 5.1E-14 1.8E-18 115.7 7.8 145 117-272 23-185 (225)
100 4dzr_A Protein-(glutamine-N5) 99.5 3.6E-14 1.2E-18 115.1 6.6 135 117-282 29-203 (215)
101 1af7_A Chemotaxis receptor met 99.5 3E-13 1E-17 114.0 11.9 96 118-216 105-250 (274)
102 3orh_A Guanidinoacetate N-meth 99.5 1.9E-14 6.6E-19 119.2 4.4 133 117-269 59-207 (236)
103 3bgv_A MRNA CAP guanine-N7 met 99.5 7.4E-13 2.5E-17 114.1 14.5 99 117-219 33-156 (313)
104 3uwp_A Histone-lysine N-methyl 99.5 1.5E-13 5.2E-18 120.5 9.6 112 105-225 163-295 (438)
105 3hm2_A Precorrin-6Y C5,15-meth 99.5 2.8E-13 9.7E-18 106.7 10.0 94 116-219 23-128 (178)
106 1nt2_A Fibrillarin-like PRE-rR 99.5 1.2E-12 4.1E-17 106.4 13.8 137 116-283 55-209 (210)
107 3htx_A HEN1; HEN1, small RNA m 99.5 7.4E-13 2.5E-17 124.5 14.1 100 116-219 719-835 (950)
108 2ipx_A RRNA 2'-O-methyltransfe 99.4 4.6E-13 1.6E-17 110.5 10.9 141 116-282 75-230 (233)
109 2nxc_A L11 mtase, ribosomal pr 99.4 5.8E-13 2E-17 111.5 11.5 126 116-279 118-251 (254)
110 2vdw_A Vaccinia virus capping 99.4 6.4E-13 2.2E-17 113.9 12.0 151 118-272 48-246 (302)
111 3fzg_A 16S rRNA methylase; met 99.4 7.2E-13 2.5E-17 104.2 10.8 132 116-274 47-189 (200)
112 3evz_A Methyltransferase; NYSG 99.4 1.4E-12 4.9E-17 107.1 13.1 136 116-282 53-218 (230)
113 2h00_A Methyltransferase 10 do 99.4 2.3E-14 7.8E-19 119.9 2.2 144 118-272 65-238 (254)
114 4df3_A Fibrillarin-like rRNA/T 99.4 1.3E-12 4.6E-17 107.1 12.6 141 116-282 75-230 (233)
115 2pxx_A Uncharacterized protein 99.4 5.3E-13 1.8E-17 108.2 9.8 102 116-221 40-162 (215)
116 3bwc_A Spermidine synthase; SA 99.4 1.3E-12 4.4E-17 112.2 12.4 129 117-272 94-240 (304)
117 1g8a_A Fibrillarin-like PRE-rR 99.4 3.9E-12 1.3E-16 104.4 14.4 141 116-283 71-226 (227)
118 3iv6_A Putative Zn-dependent a 99.4 4.3E-13 1.5E-17 112.2 8.5 104 105-219 35-149 (261)
119 3mb5_A SAM-dependent methyltra 99.4 5.1E-13 1.7E-17 111.6 9.0 124 106-270 84-220 (255)
120 1yb2_A Hypothetical protein TA 99.4 2.6E-13 8.9E-18 114.9 7.3 118 116-271 108-236 (275)
121 1l3i_A Precorrin-6Y methyltran 99.4 2E-12 7E-17 102.7 12.1 113 116-266 31-154 (192)
122 1zx0_A Guanidinoacetate N-meth 99.4 2.7E-13 9.1E-18 112.2 7.0 100 117-220 59-172 (236)
123 1xdz_A Methyltransferase GIDB; 99.4 6.6E-13 2.2E-17 110.1 9.1 120 117-271 69-201 (240)
124 1yzh_A TRNA (guanine-N(7)-)-me 99.4 2.7E-12 9.1E-17 104.5 12.3 98 118-218 41-156 (214)
125 3njr_A Precorrin-6Y methylase; 99.4 3.6E-12 1.2E-16 103.1 12.8 114 116-269 53-177 (204)
126 1jsx_A Glucose-inhibited divis 99.4 9.6E-13 3.3E-17 106.4 8.7 90 119-217 66-164 (207)
127 3mti_A RRNA methylase; SAM-dep 99.4 1.9E-12 6.3E-17 102.8 10.2 99 116-219 20-136 (185)
128 2qm3_A Predicted methyltransfe 99.4 9.6E-12 3.3E-16 109.8 15.7 97 118-221 172-280 (373)
129 3kr9_A SAM-dependent methyltra 99.4 3.5E-12 1.2E-16 104.0 11.8 130 116-282 13-156 (225)
130 3m33_A Uncharacterized protein 99.4 4.2E-13 1.4E-17 110.3 6.4 114 116-271 46-166 (226)
131 3id6_C Fibrillarin-like rRNA/T 99.4 9.1E-12 3.1E-16 102.3 14.1 142 116-283 74-230 (232)
132 3eey_A Putative rRNA methylase 99.4 1.2E-12 4.3E-17 104.9 8.6 102 116-220 20-141 (197)
133 3g89_A Ribosomal RNA small sub 99.4 1.3E-12 4.4E-17 109.0 8.6 121 117-272 79-212 (249)
134 3fpf_A Mtnas, putative unchara 99.4 2.4E-12 8.1E-17 108.9 10.1 95 116-218 120-222 (298)
135 3lec_A NADB-rossmann superfami 99.4 6.2E-12 2.1E-16 102.7 11.9 130 116-282 19-162 (230)
136 4dcm_A Ribosomal RNA large sub 99.4 3.3E-12 1.1E-16 112.7 10.9 106 107-218 214-334 (375)
137 2pjd_A Ribosomal RNA small sub 99.3 1.3E-12 4.3E-17 114.2 7.8 109 105-219 186-304 (343)
138 3lpm_A Putative methyltransfer 99.3 7.8E-12 2.7E-16 104.8 12.3 135 116-283 46-218 (259)
139 3b3j_A Histone-arginine methyl 99.3 3.2E-12 1.1E-16 116.2 10.2 105 105-216 148-261 (480)
140 2ld4_A Anamorsin; methyltransf 99.3 3E-12 1E-16 100.9 8.5 109 116-264 10-128 (176)
141 2pwy_A TRNA (adenine-N(1)-)-me 99.3 5.8E-12 2E-16 105.2 10.1 125 106-271 87-223 (258)
142 2frn_A Hypothetical protein PH 99.3 1.6E-11 5.6E-16 104.0 12.9 121 116-268 123-253 (278)
143 2avn_A Ubiquinone/menaquinone 99.3 6.3E-12 2.2E-16 105.4 9.2 97 117-220 53-154 (260)
144 2y1w_A Histone-arginine methyl 99.3 6.8E-12 2.3E-16 109.8 9.7 105 105-216 40-153 (348)
145 3gnl_A Uncharacterized protein 99.3 1.8E-11 6.3E-16 100.8 11.3 130 116-282 19-162 (244)
146 2yxd_A Probable cobalt-precorr 99.3 1.5E-11 5.2E-16 96.9 10.2 113 116-269 33-154 (183)
147 2fca_A TRNA (guanine-N(7)-)-me 99.3 1.1E-11 3.9E-16 100.8 9.6 98 118-218 38-153 (213)
148 1o54_A SAM-dependent O-methylt 99.3 1.1E-11 3.8E-16 104.9 9.8 124 106-270 103-237 (277)
149 3tfw_A Putative O-methyltransf 99.3 2.5E-12 8.6E-17 107.2 5.5 98 116-221 61-173 (248)
150 1u2z_A Histone-lysine N-methyl 99.3 1.6E-11 5.4E-16 109.5 10.8 103 116-224 240-365 (433)
151 1jg1_A PIMT;, protein-L-isoasp 99.3 8E-12 2.7E-16 103.2 8.1 100 104-218 80-189 (235)
152 2ozv_A Hypothetical protein AT 99.3 3E-11 1E-15 101.4 11.3 99 116-217 34-169 (260)
153 3dxy_A TRNA (guanine-N(7)-)-me 99.3 7E-12 2.4E-16 102.4 7.2 98 118-218 34-150 (218)
154 3tr6_A O-methyltransferase; ce 99.3 2.6E-11 8.9E-16 99.2 10.3 98 116-221 62-177 (225)
155 3ntv_A MW1564 protein; rossman 99.2 1.3E-11 4.6E-16 101.7 8.2 96 116-219 69-177 (232)
156 3q7e_A Protein arginine N-meth 99.2 2.4E-11 8.3E-16 106.2 10.0 95 117-215 65-170 (349)
157 3r3h_A O-methyltransferase, SA 99.2 2.4E-11 8.1E-16 100.9 9.5 97 117-221 59-173 (242)
158 2yxe_A Protein-L-isoaspartate 99.2 3.4E-11 1.2E-15 97.8 10.3 93 116-219 75-178 (215)
159 3lcv_B Sisomicin-gentamicin re 99.2 5.9E-12 2E-16 103.6 5.5 135 117-274 131-273 (281)
160 3dmg_A Probable ribosomal RNA 99.2 5.8E-11 2E-15 104.8 12.0 96 118-218 233-340 (381)
161 3lbf_A Protein-L-isoaspartate 99.2 4.4E-11 1.5E-15 96.7 10.3 99 105-219 67-175 (210)
162 3duw_A OMT, O-methyltransferas 99.2 4.2E-11 1.4E-15 97.9 10.2 98 116-221 56-170 (223)
163 2fyt_A Protein arginine N-meth 99.2 8.3E-11 2.8E-15 102.5 12.5 96 116-215 62-168 (340)
164 3hp7_A Hemolysin, putative; st 99.2 3.2E-11 1.1E-15 102.1 9.4 139 118-273 85-233 (291)
165 3p9n_A Possible methyltransfer 99.2 7.2E-11 2.5E-15 94.0 11.1 99 117-220 43-155 (189)
166 1ej0_A FTSJ; methyltransferase 99.2 7.7E-11 2.6E-15 92.2 10.8 97 116-219 20-137 (180)
167 2bm8_A Cephalosporin hydroxyla 99.2 6.4E-11 2.2E-15 97.9 10.7 94 118-219 81-188 (236)
168 1o9g_A RRNA methyltransferase; 99.2 2.5E-11 8.7E-16 101.1 8.2 99 118-219 51-215 (250)
169 1nv8_A HEMK protein; class I a 99.2 6.1E-11 2.1E-15 100.7 10.5 94 118-216 123-247 (284)
170 2plw_A Ribosomal RNA methyltra 99.2 1.1E-10 3.9E-15 93.6 11.5 94 116-216 20-152 (201)
171 1p91_A Ribosomal RNA large sub 99.2 9.6E-11 3.3E-15 98.5 11.4 93 117-221 84-181 (269)
172 3ckk_A TRNA (guanine-N(7)-)-me 99.2 6.5E-11 2.2E-15 97.8 10.1 99 117-218 45-168 (235)
173 3u81_A Catechol O-methyltransf 99.2 1.4E-11 4.9E-16 100.6 5.9 99 116-220 56-172 (221)
174 3gjy_A Spermidine synthase; AP 99.2 3.7E-11 1.3E-15 102.8 8.4 96 120-218 91-200 (317)
175 2gpy_A O-methyltransferase; st 99.2 5.4E-11 1.9E-15 97.9 9.0 96 116-219 52-161 (233)
176 3adn_A Spermidine synthase; am 99.2 3E-10 1E-14 96.8 13.8 98 117-217 82-197 (294)
177 2b25_A Hypothetical protein; s 99.2 1.9E-11 6.6E-16 106.3 6.5 102 105-219 95-220 (336)
178 1vbf_A 231AA long hypothetical 99.2 1.1E-10 3.8E-15 95.8 10.6 99 105-219 60-166 (231)
179 3bzb_A Uncharacterized protein 99.2 2.1E-10 7.2E-15 97.3 12.4 97 117-217 78-204 (281)
180 3dr5_A Putative O-methyltransf 99.2 6.6E-11 2.3E-15 96.8 8.7 91 120-218 58-163 (221)
181 3opn_A Putative hemolysin; str 99.2 2.3E-11 7.8E-16 100.2 5.9 137 118-273 37-185 (232)
182 3r0q_C Probable protein argini 99.2 6.2E-11 2.1E-15 104.7 8.9 100 116-219 61-170 (376)
183 2avd_A Catechol-O-methyltransf 99.2 7.6E-11 2.6E-15 96.7 8.3 98 116-221 67-182 (229)
184 1g6q_1 HnRNP arginine N-methyl 99.2 1.4E-10 4.6E-15 100.6 10.3 95 117-215 37-142 (328)
185 1ixk_A Methyltransferase; open 99.2 2E-10 6.7E-15 99.0 11.2 103 116-221 116-249 (315)
186 1dl5_A Protein-L-isoaspartate 99.2 1.5E-10 5E-15 99.9 10.2 101 105-219 65-176 (317)
187 1ws6_A Methyltransferase; stru 99.1 6.3E-11 2.2E-15 92.4 7.1 93 118-219 41-148 (171)
188 3frh_A 16S rRNA methylase; met 99.1 2.1E-10 7.2E-15 93.5 10.3 95 117-219 104-206 (253)
189 3sso_A Methyltransferase; macr 99.1 4.6E-11 1.6E-15 104.6 6.6 95 117-220 215-326 (419)
190 1iy9_A Spermidine synthase; ro 99.1 3.2E-10 1.1E-14 95.8 11.2 98 117-217 74-188 (275)
191 2vdv_E TRNA (guanine-N(7)-)-me 99.1 6.9E-11 2.4E-15 98.2 6.6 94 116-217 47-172 (246)
192 3c3p_A Methyltransferase; NP_9 99.1 6.4E-11 2.2E-15 95.9 5.7 96 117-220 55-162 (210)
193 2hnk_A SAM-dependent O-methylt 99.1 1.1E-10 3.6E-15 96.6 7.0 98 116-221 58-184 (239)
194 3tma_A Methyltransferase; thum 99.1 6.4E-10 2.2E-14 97.4 11.7 100 116-218 201-317 (354)
195 3a27_A TYW2, uncharacterized p 99.1 3.2E-10 1.1E-14 95.7 9.3 98 116-222 117-223 (272)
196 2fhp_A Methylase, putative; al 99.1 2.1E-10 7E-15 90.8 7.7 96 117-219 43-155 (187)
197 1sui_A Caffeoyl-COA O-methyltr 99.1 1.8E-10 6.3E-15 95.8 7.6 97 116-220 77-192 (247)
198 1mjf_A Spermidine synthase; sp 99.1 1.1E-09 3.8E-14 92.8 12.2 97 117-217 74-192 (281)
199 2esr_A Methyltransferase; stru 99.1 5.1E-11 1.7E-15 93.7 3.6 96 117-219 30-139 (177)
200 3c3y_A Pfomt, O-methyltransfer 99.1 3.9E-10 1.3E-14 93.2 9.1 95 116-218 68-181 (237)
201 2ift_A Putative methylase HI07 99.1 1.3E-10 4.4E-15 93.6 5.8 95 118-219 53-164 (201)
202 2pbf_A Protein-L-isoaspartate 99.1 1.1E-09 3.9E-14 89.5 11.6 93 116-219 78-194 (227)
203 2nyu_A Putative ribosomal RNA 99.1 4.1E-10 1.4E-14 89.9 8.5 97 116-219 20-146 (196)
204 2pt6_A Spermidine synthase; tr 99.1 8.6E-10 3E-14 95.2 11.0 98 117-217 115-229 (321)
205 1i9g_A Hypothetical protein RV 99.1 4.9E-10 1.7E-14 94.7 9.0 101 106-219 90-204 (280)
206 2oxt_A Nucleoside-2'-O-methylt 99.0 5.7E-10 2E-14 93.6 9.1 96 116-218 72-185 (265)
207 3dou_A Ribosomal RNA large sub 99.0 1.7E-09 5.7E-14 86.4 11.4 94 116-218 23-139 (191)
208 2i7c_A Spermidine synthase; tr 99.0 2.3E-10 8E-15 97.1 6.8 98 117-217 77-191 (283)
209 2yvl_A TRMI protein, hypotheti 99.0 2.1E-09 7.1E-14 89.0 12.1 92 116-219 89-191 (248)
210 1r18_A Protein-L-isoaspartate( 99.0 4.8E-10 1.7E-14 91.9 8.0 92 116-218 82-194 (227)
211 2wa2_A Non-structural protein 99.0 5.6E-10 1.9E-14 94.2 8.5 96 116-218 80-193 (276)
212 1inl_A Spermidine synthase; be 99.0 1.5E-09 5.3E-14 92.6 11.1 98 117-217 89-204 (296)
213 3cbg_A O-methyltransferase; cy 99.0 2.3E-10 7.9E-15 94.2 5.7 97 117-221 71-185 (232)
214 4azs_A Methyltransferase WBDD; 99.0 2.1E-10 7.3E-15 106.6 5.9 104 116-224 64-179 (569)
215 1xj5_A Spermidine synthase 1; 99.0 4.1E-10 1.4E-14 97.6 7.1 98 117-217 119-234 (334)
216 2p41_A Type II methyltransfera 99.0 7.2E-10 2.5E-14 94.9 8.4 100 116-222 80-194 (305)
217 1uir_A Polyamine aminopropyltr 99.0 3.3E-10 1.1E-14 97.6 6.1 99 117-218 76-195 (314)
218 2o07_A Spermidine synthase; st 99.0 3.3E-10 1.1E-14 97.0 6.1 99 117-218 94-209 (304)
219 2yxl_A PH0851 protein, 450AA l 99.0 3.1E-09 1.1E-13 95.9 12.7 104 116-222 257-393 (450)
220 4hc4_A Protein arginine N-meth 99.0 1.7E-09 5.9E-14 94.8 10.6 93 119-215 84-186 (376)
221 1i1n_A Protein-L-isoaspartate 99.0 1.5E-09 5.3E-14 88.6 9.7 92 116-218 75-182 (226)
222 2b2c_A Spermidine synthase; be 99.0 2.5E-10 8.6E-15 98.1 5.0 98 117-217 107-221 (314)
223 2fpo_A Methylase YHHF; structu 99.0 6.8E-10 2.3E-14 89.4 7.3 95 118-219 54-161 (202)
224 1ne2_A Hypothetical protein TA 99.0 1.1E-09 3.8E-14 87.8 8.3 89 116-205 49-139 (200)
225 3gdh_A Trimethylguanosine synt 99.0 2.7E-11 9.1E-16 100.3 -1.7 135 117-274 77-221 (241)
226 2cmg_A Spermidine synthase; tr 99.0 1.4E-09 4.8E-14 91.1 8.5 89 117-217 71-170 (262)
227 1zq9_A Probable dimethyladenos 99.0 6.2E-10 2.1E-14 94.5 6.4 102 104-214 17-143 (285)
228 3ajd_A Putative methyltransfer 98.9 1.5E-09 5E-14 91.7 6.9 103 116-221 81-214 (274)
229 2xyq_A Putative 2'-O-methyl tr 98.9 8.9E-09 3.1E-13 87.2 11.7 116 116-270 61-195 (290)
230 3tm4_A TRNA (guanine N2-)-meth 98.9 2.8E-09 9.4E-14 94.0 8.8 121 116-272 215-352 (373)
231 1wy7_A Hypothetical protein PH 98.9 1.3E-08 4.3E-13 81.9 11.5 88 117-205 48-141 (207)
232 3k6r_A Putative transferase PH 98.9 7.8E-09 2.7E-13 87.0 10.3 120 116-267 123-252 (278)
233 2ih2_A Modification methylase 98.9 1.7E-08 5.7E-13 90.3 11.9 96 118-219 39-165 (421)
234 2igt_A SAM dependent methyltra 98.9 1.2E-08 4.2E-13 88.3 10.3 96 118-218 153-272 (332)
235 2h1r_A Dimethyladenosine trans 98.8 5.8E-09 2E-13 89.1 7.5 89 104-198 31-127 (299)
236 2f8l_A Hypothetical protein LM 98.8 7.1E-09 2.4E-13 90.4 7.6 98 118-218 130-256 (344)
237 1sqg_A SUN protein, FMU protei 98.8 1.1E-08 3.9E-13 91.7 8.9 103 116-221 244-377 (429)
238 2frx_A Hypothetical protein YE 98.8 4.1E-08 1.4E-12 89.1 11.4 101 118-221 117-249 (479)
239 3m6w_A RRNA methylase; rRNA me 98.8 7.8E-09 2.7E-13 93.1 6.6 103 116-221 99-232 (464)
240 3b5i_A S-adenosyl-L-methionine 98.8 1.4E-07 4.9E-12 82.5 13.9 150 119-271 53-297 (374)
241 3m4x_A NOL1/NOP2/SUN family pr 98.7 1.7E-08 5.8E-13 90.8 7.7 103 116-221 103-237 (456)
242 1qam_A ERMC' methyltransferase 98.7 2.4E-08 8.3E-13 82.7 7.2 82 105-191 20-108 (244)
243 1yub_A Ermam, rRNA methyltrans 98.7 9.3E-09 3.2E-13 85.3 4.4 104 105-218 19-145 (245)
244 2b78_A Hypothetical protein SM 98.7 3.5E-08 1.2E-12 87.3 7.8 98 117-218 211-331 (385)
245 3c0k_A UPF0064 protein YCCW; P 98.7 9.5E-08 3.2E-12 84.8 10.2 98 117-218 219-339 (396)
246 1wxx_A TT1595, hypothetical pr 98.7 9.6E-08 3.3E-12 84.4 10.2 97 118-219 209-326 (382)
247 2yx1_A Hypothetical protein MJ 98.7 4.2E-08 1.4E-12 85.1 7.5 94 116-221 193-294 (336)
248 1uwv_A 23S rRNA (uracil-5-)-me 98.6 3.1E-07 1.1E-11 82.4 13.0 84 116-207 284-381 (433)
249 2efj_A 3,7-dimethylxanthine me 98.6 4E-07 1.4E-11 79.8 12.8 149 119-270 53-290 (384)
250 2as0_A Hypothetical protein PH 98.6 4.4E-08 1.5E-12 87.0 6.8 98 118-219 217-336 (396)
251 3gru_A Dimethyladenosine trans 98.6 1.1E-07 3.9E-12 80.6 8.9 79 104-187 39-125 (295)
252 4dmg_A Putative uncharacterize 98.6 2.3E-07 7.9E-12 82.0 11.1 98 117-219 213-327 (393)
253 3k0b_A Predicted N6-adenine-sp 98.6 1.2E-07 4E-12 84.0 9.1 103 116-219 199-351 (393)
254 3ldg_A Putative uncharacterize 98.6 3.8E-07 1.3E-11 80.4 11.3 103 116-219 192-344 (384)
255 2okc_A Type I restriction enzy 98.5 1.1E-07 3.8E-12 85.7 7.0 100 117-219 170-308 (445)
256 3o4f_A Spermidine synthase; am 98.5 2.5E-07 8.7E-12 78.0 7.8 98 116-217 81-197 (294)
257 3ldu_A Putative methylase; str 98.5 3.5E-07 1.2E-11 80.7 9.0 103 116-219 193-345 (385)
258 2qfm_A Spermine synthase; sper 98.5 2.1E-07 7E-12 80.7 7.2 97 118-219 188-314 (364)
259 4gqb_A Protein arginine N-meth 98.5 1.1E-07 3.7E-12 88.4 5.8 127 77-214 322-463 (637)
260 1m6y_A S-adenosyl-methyltransf 98.5 1.8E-07 6.1E-12 79.7 6.4 77 105-184 16-106 (301)
261 3ftd_A Dimethyladenosine trans 98.5 4.6E-07 1.6E-11 75.2 8.4 93 104-204 20-118 (249)
262 3fut_A Dimethyladenosine trans 98.4 5.1E-07 1.8E-11 75.7 8.4 89 105-200 37-133 (271)
263 1rjd_A PPM1P, carboxy methyl t 98.4 6E-06 2E-10 71.3 14.8 142 117-265 96-281 (334)
264 1m6e_X S-adenosyl-L-methionnin 98.4 1.7E-06 5.7E-11 75.2 11.2 150 117-269 50-277 (359)
265 3tqs_A Ribosomal RNA small sub 98.4 1.5E-06 5.2E-11 72.2 9.8 67 104-175 18-90 (255)
266 2jjq_A Uncharacterized RNA met 98.4 8.7E-07 3E-11 79.2 8.9 91 116-217 288-386 (425)
267 3v97_A Ribosomal RNA large sub 98.4 1E-06 3.6E-11 83.5 9.4 99 116-218 537-657 (703)
268 1qyr_A KSGA, high level kasuga 98.3 5.4E-07 1.8E-11 74.9 6.0 90 104-198 10-111 (252)
269 3uzu_A Ribosomal RNA small sub 98.3 2.6E-07 8.9E-12 77.9 3.7 69 105-176 32-106 (279)
270 2k4m_A TR8_protein, UPF0146 pr 98.3 3.7E-06 1.3E-10 62.7 9.0 76 116-206 33-114 (153)
271 2qy6_A UPF0209 protein YFCK; s 98.2 2.6E-06 8.8E-11 70.9 7.5 117 118-269 60-232 (257)
272 3ua3_A Protein arginine N-meth 98.2 1.7E-06 5.8E-11 80.6 6.6 125 77-213 377-529 (745)
273 3evf_A RNA-directed RNA polyme 98.2 4E-06 1.4E-10 69.5 8.1 102 116-221 72-186 (277)
274 3v97_A Ribosomal RNA large sub 98.2 6.4E-06 2.2E-10 78.2 9.5 101 116-219 188-348 (703)
275 3iei_A Leucine carboxyl methyl 98.1 0.00022 7.5E-09 61.4 18.2 149 118-272 90-281 (334)
276 3bt7_A TRNA (uracil-5-)-methyl 98.1 1.3E-06 4.5E-11 76.7 4.0 88 119-219 214-327 (369)
277 2r6z_A UPF0341 protein in RSP 98.1 3.8E-06 1.3E-10 69.9 6.3 71 116-188 81-173 (258)
278 2b9e_A NOL1/NOP2/SUN domain fa 98.1 1.2E-05 4.1E-10 68.7 8.5 67 116-182 100-180 (309)
279 2dul_A N(2),N(2)-dimethylguano 98.0 2.6E-06 9E-11 74.9 3.9 91 118-217 47-163 (378)
280 2ar0_A M.ecoki, type I restric 98.0 1.2E-05 4E-10 74.1 7.8 99 117-218 168-312 (541)
281 3gcz_A Polyprotein; flavivirus 98.0 9.9E-06 3.4E-10 67.2 6.3 102 116-221 88-203 (282)
282 3axs_A Probable N(2),N(2)-dime 97.9 5.5E-06 1.9E-10 73.0 3.9 93 117-218 51-158 (392)
283 4auk_A Ribosomal RNA large sub 97.8 0.0001 3.5E-09 63.8 10.3 86 116-206 209-297 (375)
284 3c6k_A Spermine synthase; sper 97.8 3.4E-05 1.2E-09 67.1 6.3 95 118-216 205-329 (381)
285 2uyo_A Hypothetical protein ML 97.8 0.00036 1.2E-08 59.5 12.3 143 117-267 101-274 (310)
286 2vz8_A Fatty acid synthase; tr 97.7 1.3E-05 4.4E-10 85.7 2.9 141 119-271 1241-1394(2512)
287 2oyr_A UPF0341 protein YHIQ; a 97.7 2.8E-05 9.5E-10 64.6 4.3 71 116-188 84-176 (258)
288 3s1s_A Restriction endonucleas 97.7 0.0002 6.8E-09 67.9 10.5 99 118-219 321-466 (878)
289 3eld_A Methyltransferase; flav 97.6 0.00013 4.4E-09 61.0 7.4 97 116-216 79-189 (300)
290 3ll7_A Putative methyltransfer 97.6 2.9E-05 1E-09 68.6 3.2 64 117-182 92-169 (410)
291 3khk_A Type I restriction-modi 97.6 5.4E-05 1.9E-09 69.6 5.0 96 120-218 246-395 (544)
292 1wg8_A Predicted S-adenosylmet 97.5 0.00013 4.5E-09 60.7 5.9 74 104-182 11-95 (285)
293 3cvo_A Methyltransferase-like 97.5 0.00057 2E-08 54.3 8.9 93 117-223 29-158 (202)
294 3lkd_A Type I restriction-modi 97.4 0.0004 1.4E-08 63.8 8.4 98 118-218 221-358 (542)
295 2px2_A Genome polyprotein [con 97.3 0.00035 1.2E-08 57.1 6.4 104 115-222 70-186 (269)
296 3p8z_A Mtase, non-structural p 97.3 0.00081 2.8E-08 54.2 7.5 104 116-224 76-191 (267)
297 2wk1_A NOVP; transferase, O-me 97.2 0.0018 6.1E-08 54.3 9.3 96 117-220 105-245 (282)
298 2zwa_A Leucine carboxyl methyl 97.0 0.016 5.5E-07 54.9 15.5 148 118-272 107-309 (695)
299 3lkz_A Non-structural protein 96.9 0.0049 1.7E-07 51.4 9.3 103 116-222 92-207 (321)
300 3vyw_A MNMC2; tRNA wobble urid 96.8 0.0087 3E-07 50.5 10.0 120 118-272 96-248 (308)
301 3tka_A Ribosomal RNA small sub 96.7 0.0035 1.2E-07 53.5 6.9 66 104-172 46-115 (347)
302 3r24_A NSP16, 2'-O-methyl tran 96.3 0.017 5.8E-07 48.2 8.5 91 116-216 107-215 (344)
303 4fzv_A Putative methyltransfer 96.3 0.014 4.8E-07 50.6 8.5 105 116-223 146-289 (359)
304 1i4w_A Mitochondrial replicati 96.1 0.008 2.8E-07 52.0 6.0 54 119-172 59-116 (353)
305 3ufb_A Type I restriction-modi 95.8 0.041 1.4E-06 50.4 9.6 100 117-219 216-363 (530)
306 2zig_A TTHA0409, putative modi 94.7 0.026 9E-07 47.5 4.2 41 117-159 234-275 (297)
307 3tos_A CALS11; methyltransfera 93.5 0.21 7.3E-06 41.0 7.3 94 119-220 70-218 (257)
308 3g7u_A Cytosine-specific methy 93.1 0.58 2E-05 40.7 9.8 96 120-222 3-122 (376)
309 1g55_A DNA cytosine methyltran 92.7 0.39 1.3E-05 41.2 8.1 124 120-268 3-145 (343)
310 2c7p_A Modification methylase 91.9 0.97 3.3E-05 38.4 9.6 121 119-268 11-149 (327)
311 2oo3_A Protein involved in cat 91.7 0.48 1.7E-05 39.3 7.1 101 119-224 92-204 (283)
312 1zkd_A DUF185; NESG, RPR58, st 90.3 0.53 1.8E-05 41.1 6.4 37 118-154 80-123 (387)
313 3ggo_A Prephenate dehydrogenas 90.0 0.95 3.2E-05 38.2 7.6 83 120-207 34-120 (314)
314 3ps9_A TRNA 5-methylaminomethy 90.0 0.91 3.1E-05 42.6 8.2 93 119-214 67-215 (676)
315 3ew7_A LMO0794 protein; Q8Y8U8 89.4 1.9 6.7E-05 33.5 8.7 95 121-219 2-103 (221)
316 3pvc_A TRNA 5-methylaminomethy 89.0 0.63 2.2E-05 43.9 6.3 118 118-270 58-231 (689)
317 2py6_A Methyltransferase FKBM; 88.6 0.69 2.4E-05 40.7 5.9 40 117-156 225-267 (409)
318 1g60_A Adenine-specific methyl 88.4 0.45 1.5E-05 39.0 4.3 40 117-158 211-251 (260)
319 3qv2_A 5-cytosine DNA methyltr 87.7 2.2 7.7E-05 36.2 8.4 124 119-268 10-156 (327)
320 3b1f_A Putative prephenate deh 87.4 2 6.7E-05 35.5 7.7 83 120-207 7-93 (290)
321 4h0n_A DNMT2; SAH binding, tra 85.1 2 6.8E-05 36.6 6.7 120 120-268 4-145 (333)
322 3h2s_A Putative NADH-flavin re 84.7 6.8 0.00023 30.4 9.4 95 121-219 2-105 (224)
323 3s2e_A Zinc-containing alcohol 84.3 3.5 0.00012 34.9 8.0 92 116-219 164-264 (340)
324 3ius_A Uncharacterized conserv 84.0 9.2 0.00032 31.0 10.3 94 120-219 6-103 (286)
325 1lss_A TRK system potassium up 83.0 6 0.0002 28.0 7.8 81 120-207 5-95 (140)
326 3llv_A Exopolyphosphatase-rela 82.6 5.8 0.0002 28.5 7.6 77 120-203 7-93 (141)
327 3uko_A Alcohol dehydrogenase c 81.8 4.6 0.00016 34.7 7.8 94 116-220 191-297 (378)
328 3two_A Mannitol dehydrogenase; 81.2 4 0.00014 34.6 7.2 90 116-219 174-266 (348)
329 3fwz_A Inner membrane protein 80.8 7.7 0.00026 28.0 7.7 87 120-216 8-103 (140)
330 2dph_A Formaldehyde dismutase; 80.6 3.7 0.00013 35.7 6.8 101 116-220 183-301 (398)
331 2aef_A Calcium-gated potassium 80.1 17 0.00057 28.6 10.2 86 118-216 8-103 (234)
332 3r6d_A NAD-dependent epimerase 80.0 3.9 0.00013 31.9 6.3 136 120-271 6-154 (221)
333 4ej6_A Putative zinc-binding d 79.9 5.9 0.0002 34.0 7.8 94 116-221 180-287 (370)
334 1pl8_A Human sorbitol dehydrog 79.6 5.2 0.00018 34.1 7.4 92 116-219 169-274 (356)
335 3jv7_A ADH-A; dehydrogenase, n 79.1 6.5 0.00022 33.2 7.8 94 116-220 169-272 (345)
336 3ubt_Y Modification methylase 78.9 6.1 0.00021 33.2 7.5 120 121-267 2-138 (331)
337 1f8f_A Benzyl alcohol dehydrog 78.1 5.7 0.0002 34.0 7.2 93 116-220 188-291 (371)
338 3l4b_C TRKA K+ channel protien 78.1 8.5 0.00029 30.0 7.7 80 121-207 2-91 (218)
339 3e48_A Putative nucleoside-dip 78.0 16 0.00056 29.5 9.8 96 121-220 2-107 (289)
340 3g79_A NDP-N-acetyl-D-galactos 77.1 20 0.00069 32.0 10.6 101 117-223 16-151 (478)
341 4eez_A Alcohol dehydrogenase 1 76.3 17 0.00059 30.5 9.6 92 116-218 161-263 (348)
342 3iht_A S-adenosyl-L-methionine 75.5 18 0.00063 27.0 8.1 52 119-172 41-94 (174)
343 4f3n_A Uncharacterized ACR, CO 75.1 2.6 8.9E-05 37.2 4.1 33 119-151 138-175 (432)
344 1id1_A Putative potassium chan 74.9 19 0.00067 26.1 8.6 87 120-216 4-103 (153)
345 1pqw_A Polyketide synthase; ro 74.1 7.9 0.00027 29.6 6.4 89 116-220 36-139 (198)
346 2h6e_A ADH-4, D-arabinose 1-de 72.6 4.4 0.00015 34.3 4.9 92 116-219 169-270 (344)
347 3mag_A VP39; methylated adenin 72.0 4 0.00014 33.9 4.2 33 118-150 60-96 (307)
348 1kol_A Formaldehyde dehydrogen 71.9 22 0.00077 30.5 9.4 98 116-220 183-302 (398)
349 3dfz_A SIRC, precorrin-2 dehyd 71.7 4.7 0.00016 32.2 4.5 64 118-183 30-98 (223)
350 2g1u_A Hypothetical protein TM 71.6 26 0.0009 25.4 10.8 85 117-207 17-110 (155)
351 1e3j_A NADP(H)-dependent ketos 70.7 24 0.00084 29.7 9.3 91 116-219 166-272 (352)
352 4dvj_A Putative zinc-dependent 70.4 2.1 7.1E-05 36.8 2.4 90 118-218 171-270 (363)
353 1uuf_A YAHK, zinc-type alcohol 70.0 1.3 4.5E-05 38.2 1.0 91 116-219 192-289 (369)
354 3l9w_A Glutathione-regulated p 69.7 13 0.00044 32.5 7.3 88 120-217 5-101 (413)
355 3me5_A Cytosine-specific methy 69.7 15 0.0005 33.0 7.8 122 119-267 88-255 (482)
356 1jvb_A NAD(H)-dependent alcoho 69.0 5.4 0.00018 33.8 4.7 93 116-219 168-272 (347)
357 2f1k_A Prephenate dehydrogenas 68.8 12 0.00041 30.4 6.7 79 121-207 2-83 (279)
358 2g5c_A Prephenate dehydrogenas 68.5 15 0.0005 29.9 7.1 83 120-207 2-88 (281)
359 2o3j_A UDP-glucose 6-dehydroge 68.0 15 0.0005 32.9 7.5 97 120-221 10-137 (481)
360 2qrv_A DNA (cytosine-5)-methyl 67.8 24 0.00084 29.2 8.3 105 116-222 13-143 (295)
361 3m6i_A L-arabinitol 4-dehydrog 67.6 55 0.0019 27.5 12.1 93 116-219 177-284 (363)
362 3c85_A Putative glutathione-re 67.3 28 0.00097 26.0 8.2 87 119-216 39-137 (183)
363 3gg2_A Sugar dehydrogenase, UD 66.7 10 0.00035 33.6 6.2 96 120-222 3-125 (450)
364 3pid_A UDP-glucose 6-dehydroge 66.6 13 0.00046 32.7 6.7 97 119-222 36-156 (432)
365 2c0c_A Zinc binding alcohol de 66.5 19 0.00066 30.5 7.7 92 116-220 161-263 (362)
366 1cdo_A Alcohol dehydrogenase; 66.4 16 0.00053 31.3 7.1 94 116-220 190-296 (374)
367 3uog_A Alcohol dehydrogenase; 66.4 13 0.00044 31.6 6.6 92 116-221 187-290 (363)
368 3c24_A Putative oxidoreductase 66.3 8.5 0.00029 31.6 5.2 83 120-216 12-98 (286)
369 3sxp_A ADP-L-glycero-D-mannohe 65.9 22 0.00076 29.9 8.0 97 120-219 11-138 (362)
370 1rjw_A ADH-HT, alcohol dehydro 65.6 21 0.00073 29.9 7.8 90 116-219 162-262 (339)
371 3fpc_A NADP-dependent alcohol 65.2 5.9 0.0002 33.6 4.1 94 116-221 164-269 (352)
372 2zig_A TTHA0409, putative modi 65.0 8.8 0.0003 31.8 5.1 54 161-217 20-96 (297)
373 2jl1_A Triphenylmethane reduct 64.3 44 0.0015 26.7 9.3 94 122-219 3-107 (287)
374 3e8x_A Putative NAD-dependent 64.3 48 0.0017 25.7 9.7 138 119-272 21-171 (236)
375 3qvo_A NMRA family protein; st 64.0 50 0.0017 25.7 11.1 93 120-220 24-126 (236)
376 4a2c_A Galactitol-1-phosphate 63.2 65 0.0022 26.8 11.1 96 116-222 158-264 (346)
377 1e3i_A Alcohol dehydrogenase, 62.6 20 0.00068 30.6 7.1 93 116-219 193-298 (376)
378 3dhn_A NAD-dependent epimerase 62.3 30 0.001 26.6 7.7 95 120-219 5-112 (227)
379 2y0c_A BCEC, UDP-glucose dehyd 61.8 14 0.00049 32.9 6.2 97 118-221 7-130 (478)
380 2fzw_A Alcohol dehydrogenase c 61.7 16 0.00056 31.1 6.4 93 116-220 188-294 (373)
381 3vrd_B FCCB subunit, flavocyto 61.6 7.8 0.00027 33.3 4.3 32 119-150 2-35 (401)
382 2jhf_A Alcohol dehydrogenase E 61.5 18 0.0006 30.9 6.6 93 116-219 189-294 (374)
383 1v3u_A Leukotriene B4 12- hydr 61.5 23 0.0008 29.5 7.2 89 116-220 143-246 (333)
384 1p0f_A NADP-dependent alcohol 60.2 14 0.00049 31.5 5.7 94 116-220 189-295 (373)
385 2dq4_A L-threonine 3-dehydroge 60.2 27 0.00091 29.3 7.4 87 118-219 164-263 (343)
386 2j3h_A NADP-dependent oxidored 60.1 34 0.0012 28.6 8.1 88 116-219 153-256 (345)
387 2hcy_A Alcohol dehydrogenase 1 60.0 16 0.00056 30.7 6.0 90 116-219 167-270 (347)
388 4a7p_A UDP-glucose dehydrogena 59.9 22 0.00076 31.4 7.0 100 118-222 7-132 (446)
389 4e5v_A Putative THUA-like prot 59.5 55 0.0019 26.8 8.9 41 173-220 55-95 (281)
390 3d1l_A Putative NADP oxidoredu 58.9 17 0.00059 29.2 5.8 86 120-217 11-100 (266)
391 3ulk_A Ketol-acid reductoisome 57.3 7.7 0.00026 34.4 3.4 89 118-218 36-131 (491)
392 2ew2_A 2-dehydropantoate 2-red 56.8 24 0.00081 28.9 6.4 80 120-207 4-100 (316)
393 1hdo_A Biliverdin IX beta redu 56.8 56 0.0019 24.4 8.2 98 120-220 4-112 (206)
394 1vj0_A Alcohol dehydrogenase, 56.0 21 0.00072 30.6 6.1 94 116-220 193-300 (380)
395 3tqh_A Quinone oxidoreductase; 56.0 5 0.00017 33.6 2.0 89 116-218 150-245 (321)
396 4ezb_A Uncharacterized conserv 55.8 28 0.00097 29.0 6.7 84 120-218 25-120 (317)
397 2i6t_A Ubiquitin-conjugating e 55.1 21 0.00071 29.8 5.7 64 119-184 14-85 (303)
398 3qwb_A Probable quinone oxidor 54.1 23 0.0008 29.5 6.0 91 116-219 146-248 (334)
399 2hwk_A Helicase NSP2; rossman 53.7 32 0.0011 28.5 6.3 110 133-272 155-281 (320)
400 2d8a_A PH0655, probable L-thre 53.7 37 0.0013 28.5 7.2 89 118-219 167-268 (348)
401 1xgk_A Nitrogen metabolite rep 53.5 99 0.0034 25.9 10.5 131 120-271 6-150 (352)
402 4b7c_A Probable oxidoreductase 52.9 23 0.00078 29.6 5.7 91 116-221 147-251 (336)
403 1zcj_A Peroxisomal bifunctiona 52.6 75 0.0026 28.0 9.3 89 119-217 37-148 (463)
404 1kyq_A Met8P, siroheme biosynt 52.4 76 0.0026 25.9 8.5 86 118-207 12-133 (274)
405 2q3e_A UDP-glucose 6-dehydroge 52.3 46 0.0016 29.5 7.8 96 120-220 6-132 (467)
406 4e12_A Diketoreductase; oxidor 52.3 14 0.00048 30.2 4.2 90 119-216 4-118 (283)
407 1boo_A Protein (N-4 cytosine-s 52.1 11 0.00036 31.8 3.4 40 117-158 251-291 (323)
408 3ic5_A Putative saccharopine d 52.0 50 0.0017 22.0 8.2 62 120-184 6-77 (118)
409 1iz0_A Quinone oxidoreductase; 51.6 6.7 0.00023 32.4 2.1 90 116-219 123-219 (302)
410 2b69_A UDP-glucuronate decarbo 51.5 95 0.0033 25.6 9.5 66 119-185 27-100 (343)
411 3vtf_A UDP-glucose 6-dehydroge 51.2 15 0.00052 32.5 4.4 105 119-225 21-150 (444)
412 3g0o_A 3-hydroxyisobutyrate de 51.0 27 0.00091 28.8 5.7 86 120-217 8-100 (303)
413 3krt_A Crotonyl COA reductase; 50.8 47 0.0016 29.2 7.7 90 116-219 226-345 (456)
414 3tri_A Pyrroline-5-carboxylate 50.6 23 0.00078 29.0 5.2 87 120-216 4-95 (280)
415 4e2x_A TCAB9; kijanose, tetron 50.2 1.1E+02 0.0038 26.2 9.9 91 117-217 317-409 (416)
416 3oig_A Enoyl-[acyl-carrier-pro 50.1 93 0.0032 24.6 9.3 98 119-221 7-150 (266)
417 2eih_A Alcohol dehydrogenase; 49.9 1.1E+02 0.0038 25.4 10.5 89 116-220 164-267 (343)
418 3ip1_A Alcohol dehydrogenase, 49.9 68 0.0023 27.6 8.4 95 116-220 211-320 (404)
419 3dqp_A Oxidoreductase YLBE; al 49.1 33 0.0011 26.3 5.8 62 121-186 2-73 (219)
420 1boo_A Protein (N-4 cytosine-s 49.0 24 0.00081 29.6 5.2 55 160-217 12-83 (323)
421 1t2d_A LDH-P, L-lactate dehydr 48.9 48 0.0016 27.7 7.0 65 119-184 4-80 (322)
422 3o26_A Salutaridine reductase; 48.8 77 0.0026 25.5 8.3 67 119-186 12-101 (311)
423 3c1a_A Putative oxidoreductase 48.6 91 0.0031 25.6 8.8 84 120-218 11-99 (315)
424 4id9_A Short-chain dehydrogena 48.2 65 0.0022 26.6 7.9 93 119-219 19-126 (347)
425 1piw_A Hypothetical zinc-type 48.2 5.2 0.00018 34.1 0.9 93 116-219 177-277 (360)
426 3goh_A Alcohol dehydrogenase, 48.1 9.3 0.00032 31.8 2.4 88 116-218 140-229 (315)
427 1bg6_A N-(1-D-carboxylethyl)-L 47.9 22 0.00074 29.9 4.8 88 120-218 5-108 (359)
428 2b5w_A Glucose dehydrogenase; 47.8 31 0.0011 29.1 5.8 86 120-220 174-275 (357)
429 4eye_A Probable oxidoreductase 47.2 14 0.00049 31.1 3.5 92 116-220 157-259 (342)
430 3c7a_A Octopine dehydrogenase; 47.2 29 0.00098 29.9 5.5 88 121-217 4-114 (404)
431 4hv4_A UDP-N-acetylmuramate--L 46.9 1.5E+02 0.0053 26.2 10.5 124 118-266 21-151 (494)
432 1yb5_A Quinone oxidoreductase; 46.4 78 0.0027 26.6 8.1 91 116-219 168-270 (351)
433 3gms_A Putative NADPH:quinone 46.3 16 0.00055 30.7 3.7 91 116-220 142-245 (340)
434 2hmt_A YUAA protein; RCK, KTN, 46.1 72 0.0024 22.1 9.3 62 120-184 7-78 (144)
435 1mv8_A GMD, GDP-mannose 6-dehy 46.0 32 0.0011 30.1 5.7 95 121-219 2-123 (436)
436 1vpt_A VP39; RNA CAP, poly(A) 45.8 20 0.0007 30.1 4.0 66 119-185 76-154 (348)
437 4dcm_A Ribosomal RNA large sub 45.7 44 0.0015 28.6 6.5 91 118-219 38-137 (375)
438 4hkt_A Inositol 2-dehydrogenas 45.6 22 0.00075 29.7 4.4 86 120-219 4-94 (331)
439 3ojo_A CAP5O; rossmann fold, c 45.4 1.6E+02 0.0053 25.8 10.1 95 120-223 12-133 (431)
440 3k96_A Glycerol-3-phosphate de 44.7 33 0.0011 29.2 5.5 80 120-207 30-125 (356)
441 1pjq_A CYSG, siroheme synthase 44.6 32 0.0011 30.4 5.5 64 119-183 12-79 (457)
442 1lnq_A MTHK channels, potassiu 43.7 50 0.0017 27.5 6.4 85 119-216 115-209 (336)
443 1np3_A Ketol-acid reductoisome 43.0 11 0.00037 32.0 2.0 83 120-216 17-104 (338)
444 3jyn_A Quinone oxidoreductase; 42.9 31 0.0011 28.6 5.0 92 116-220 138-241 (325)
445 3dmg_A Probable ribosomal RNA 42.9 22 0.00074 30.7 4.0 87 120-219 47-140 (381)
446 2cdc_A Glucose dehydrogenase g 42.4 12 0.00041 31.9 2.3 89 119-220 181-280 (366)
447 3hyw_A Sulfide-quinone reducta 41.6 24 0.00082 30.7 4.2 31 120-150 3-35 (430)
448 1eg2_A Modification methylase 41.6 45 0.0015 27.9 5.7 40 117-158 241-284 (319)
449 3m2t_A Probable dehydrogenase; 41.0 28 0.00095 29.6 4.4 87 120-219 6-99 (359)
450 2cvz_A Dehydrogenase, 3-hydrox 41.0 38 0.0013 27.3 5.1 83 121-217 3-88 (289)
451 3gvi_A Malate dehydrogenase; N 41.0 68 0.0023 26.9 6.7 99 119-218 7-124 (324)
452 3euw_A MYO-inositol dehydrogen 40.7 1.2E+02 0.0041 25.2 8.3 87 120-219 5-96 (344)
453 2bll_A Protein YFBG; decarboxy 40.6 41 0.0014 27.8 5.4 63 121-184 2-75 (345)
454 3grk_A Enoyl-(acyl-carrier-pro 40.5 1.4E+02 0.005 24.0 10.1 98 119-221 31-172 (293)
455 1xea_A Oxidoreductase, GFO/IDH 40.4 17 0.0006 30.2 3.0 87 120-218 3-93 (323)
456 3slg_A PBGP3 protein; structur 39.9 26 0.0009 29.5 4.1 65 120-185 25-100 (372)
457 3nx4_A Putative oxidoreductase 39.9 47 0.0016 27.4 5.6 86 121-219 149-242 (324)
458 1qor_A Quinone oxidoreductase; 39.6 32 0.0011 28.6 4.5 89 116-220 138-241 (327)
459 2vvp_A Ribose-5-phosphate isom 38.8 16 0.00054 27.4 2.1 37 122-158 64-100 (162)
460 4dup_A Quinone oxidoreductase; 38.5 31 0.0011 29.1 4.3 91 116-220 165-267 (353)
461 1guz_A Malate dehydrogenase; o 38.1 77 0.0026 26.2 6.6 93 121-217 2-117 (310)
462 3f4l_A Putative oxidoreductase 38.0 46 0.0016 27.9 5.3 86 120-218 3-95 (345)
463 2x4g_A Nucleoside-diphosphate- 38.0 93 0.0032 25.5 7.2 65 120-186 14-87 (342)
464 2j8z_A Quinone oxidoreductase; 37.9 69 0.0024 26.9 6.4 90 116-219 160-262 (354)
465 2zcu_A Uncharacterized oxidore 37.7 1.3E+02 0.0046 23.7 8.0 89 127-220 6-105 (286)
466 2ae2_A Protein (tropinone redu 37.7 1.5E+02 0.005 23.3 8.7 100 120-221 10-148 (260)
467 3cea_A MYO-inositol 2-dehydrog 37.6 52 0.0018 27.4 5.6 88 119-218 8-101 (346)
468 3abi_A Putative uncharacterize 37.3 1.6E+02 0.0055 24.7 8.7 62 119-184 16-85 (365)
469 1o1x_A Ribose-5-phosphate isom 37.1 15 0.00052 27.3 1.8 39 121-159 71-109 (155)
470 3d0o_A L-LDH 1, L-lactate dehy 37.1 1.6E+02 0.0053 24.4 8.4 98 119-217 6-122 (317)
471 3s5p_A Ribose 5-phosphate isom 37.1 18 0.00063 27.2 2.2 38 122-159 81-118 (166)
472 3he8_A Ribose-5-phosphate isom 36.3 18 0.00062 26.7 2.1 37 123-159 61-97 (149)
473 1ez4_A Lactate dehydrogenase; 36.1 1.1E+02 0.0037 25.4 7.3 98 119-217 5-120 (318)
474 3ruf_A WBGU; rossmann fold, UD 35.6 1E+02 0.0035 25.4 7.2 67 119-186 25-110 (351)
475 4had_A Probable oxidoreductase 35.6 93 0.0032 25.9 6.9 94 116-221 20-119 (350)
476 3evn_A Oxidoreductase, GFO/IDH 34.9 55 0.0019 27.2 5.3 88 120-219 6-98 (329)
477 2x0j_A Malate dehydrogenase; o 34.9 1.4E+02 0.0046 24.7 7.5 98 121-218 2-118 (294)
478 4fn4_A Short chain dehydrogena 34.9 1.7E+02 0.0059 23.3 10.4 77 120-219 8-92 (254)
479 3ezy_A Dehydrogenase; structur 34.9 69 0.0023 26.7 5.9 88 120-219 3-95 (344)
480 4fgs_A Probable dehydrogenase 34.8 1.8E+02 0.0062 23.5 11.0 68 120-206 30-102 (273)
481 3rc1_A Sugar 3-ketoreductase; 34.7 1.4E+02 0.0046 25.0 7.8 87 120-219 28-120 (350)
482 3mog_A Probable 3-hydroxybutyr 34.7 95 0.0032 27.6 7.0 87 120-218 6-119 (483)
483 2ho3_A Oxidoreductase, GFO/IDH 34.5 49 0.0017 27.4 4.9 85 121-218 3-92 (325)
484 4g65_A TRK system potassium up 34.4 81 0.0028 27.8 6.4 62 119-182 3-74 (461)
485 3bio_A Oxidoreductase, GFO/IDH 34.3 77 0.0026 26.1 6.0 82 120-218 10-95 (304)
486 1dlj_A UDP-glucose dehydrogena 34.3 44 0.0015 28.9 4.6 92 121-220 2-118 (402)
487 4a0s_A Octenoyl-COA reductase/ 34.3 60 0.0021 28.3 5.6 91 116-219 218-337 (447)
488 3fbg_A Putative arginate lyase 34.2 15 0.00052 30.9 1.6 88 118-217 150-247 (346)
489 3ph3_A Ribose-5-phosphate isom 34.1 18 0.00061 27.3 1.8 38 122-159 80-117 (169)
490 1xa0_A Putative NADPH dependen 33.9 39 0.0013 28.0 4.1 85 121-219 152-247 (328)
491 3gaz_A Alcohol dehydrogenase s 33.5 19 0.00066 30.3 2.2 90 116-219 148-247 (343)
492 3hwr_A 2-dehydropantoate 2-red 33.4 60 0.0021 26.9 5.2 89 119-218 19-120 (318)
493 2q1w_A Putative nucleotide sug 33.3 1.7E+02 0.0057 23.9 8.1 98 120-219 22-137 (333)
494 4dll_A 2-hydroxy-3-oxopropiona 33.0 80 0.0027 26.1 6.0 88 119-218 31-123 (320)
495 2dpo_A L-gulonate 3-dehydrogen 32.8 46 0.0016 27.8 4.4 88 119-217 6-121 (319)
496 1qsg_A Enoyl-[acyl-carrier-pro 32.8 1.8E+02 0.0061 22.9 8.2 98 120-220 10-150 (265)
497 3nep_X Malate dehydrogenase; h 32.7 1.3E+02 0.0045 24.9 7.2 98 121-218 2-118 (314)
498 4g65_A TRK system potassium up 32.6 1.8E+02 0.0063 25.5 8.5 66 117-184 233-308 (461)
499 1y1p_A ARII, aldehyde reductas 32.5 1.8E+02 0.006 23.6 8.1 101 118-220 10-133 (342)
500 3ged_A Short-chain dehydrogena 32.5 1.9E+02 0.0064 23.0 11.3 77 120-219 3-83 (247)
No 1
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=100.00 E-value=1.4e-49 Score=350.30 Aligned_cols=271 Identities=19% Similarity=0.316 Sum_probs=241.2
Q ss_pred CccccccCeeEeeccCCCCceEecchhcc-hhhcCCCCChhhhhhhhcCccchhhhhhHHHhhccCCcchhHHhhC---C
Q 023384 1 MRLLVHSGCFKKTKVNGQEEAYGLTAAST-LLIKDKPYCLSPTVSVFVDPFFVAPYQSLSSWFKGAELTLWETVHG---I 76 (283)
Q Consensus 1 Lr~L~~~g~l~~~~~~~~~~~y~~t~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g---~ 76 (283)
||+|+++|+|++... ++.+.|+||+.++ +|.+++|.++..++.+.. +..+..|.+|.+++++++ +++...+| .
T Consensus 64 Lr~L~~~gll~~~~~-~~~~~y~~t~~s~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~L~~~vr~g~-~~~~~~~g~~~~ 140 (353)
T 4a6d_A 64 LDICVSLKLLKVETR-GGKAFYRNTELSSDYLTTVSPTSQCSMLKYMG-RTSYRCWGHLADAVREGR-NQYLETFGVPAE 140 (353)
T ss_dssp HHHHHHTTSEEEEEE-TTEEEEEECHHHHHHHSTTSTTCCHHHHHHHH-HTHHHHHTTHHHHHHHTS-CCHHHHHSCCCS
T ss_pred HHHHHHCCCEEEecc-CccceeeCCHHHHHHhhcCCchHHHHHHHHhC-HHHHHHHHHHHHHHhcCC-ChhHHhcCCChH
Confidence 588999999986542 1145799999986 788888889998888764 456889999999999997 67888887 3
Q ss_pred chhhHhhcCccHHHHHHHHhhhhhhhhHHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhc
Q 023384 77 KFWEFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVAN 156 (283)
Q Consensus 77 ~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~ 156 (283)
++|+++.++|+....|..+|...+....+.+++ .++ +++..+|||||||+|.++..+++++|+++++++|+|++++.
T Consensus 141 ~~~~~~~~~~~~~~~f~~aM~~~~~~~~~~~~~-~~~--~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~ 217 (353)
T 4a6d_A 141 ELFTAIYRSEGERLQFMQALQEVWSVNGRSVLT-AFD--LSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWT 217 (353)
T ss_dssp SHHHHHTSSHHHHHHHHHHHHTTHHHHHHHHHH-SSC--GGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHH
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH-hcC--cccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHH
Confidence 789999999999999999999988888888999 888 88889999999999999999999999999999999999877
Q ss_pred CCC------CCCeEEEEcCCCC-CCCCceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchh
Q 023384 157 LPE------ADNLKYIAGDMFQ-FIPPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHE 229 (283)
Q Consensus 157 a~~------~~rv~~~~~d~~~-~~p~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~ 229 (283)
+++ .+||+++.+||++ +.|++|+|+++++||+|+|+++++||++++++|+| ||+++|+|.+++++...+
T Consensus 218 a~~~~~~~~~~rv~~~~gD~~~~~~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~p---gg~lli~e~~~~~~~~~~- 293 (353)
T 4a6d_A 218 AKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILARVLHDWADGKCSHLLERIYHTCKP---GGGILVIESLLDEDRRGP- 293 (353)
T ss_dssp HHHHSCC--CCSEEEEESCTTTSCCCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCT---TCEEEEEECCCCTTSCCC-
T ss_pred HHHhhhhcccCceeeecCccccCCCCCceEEEeeeecccCCHHHHHHHHHHHHhhCCC---CCEEEEEEeeeCCCCCCC-
Confidence 653 6899999999998 56789999999999999999999999999999999 899999999998776554
Q ss_pred hhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCeeeEEEcCCcceEEEEeC
Q 023384 230 LTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKITPIFGMRFLIEIYP 283 (283)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 283 (283)
.....+|+.|+...+|++||.+||+++|++|||+.+++++.++..++|+|+|
T Consensus 294 --~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~v~~~~~~~~~i~ArK 345 (353)
T 4a6d_A 294 --LLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFKKTGAIYDAILARK 345 (353)
T ss_dssp --HHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEEEECCSSSCEEEEEEC
T ss_pred --HHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEEcCCceEEEEEEe
Confidence 2345789999999999999999999999999999999999988899999998
No 2
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=100.00 E-value=4.3e-46 Score=329.38 Aligned_cols=277 Identities=27% Similarity=0.466 Sum_probs=241.6
Q ss_pred CccccccCeeEeeccC--CC--CceEecchhcchhhcCC-CCChhhhhhhhcCccchhhhhhHHHhhccCCcchhHHhhC
Q 023384 1 MRLLVHSGCFKKTKVN--GQ--EEAYGLTAASTLLIKDK-PYCLSPTVSVFVDPFFVAPYQSLSSWFKGAELTLWETVHG 75 (283)
Q Consensus 1 Lr~L~~~g~l~~~~~~--~~--~~~y~~t~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g 75 (283)
||+|+++|+|+++... .+ ++.|++|+.+++|+.+. +.++++++.+..++.++..|.+|.+++++|. ++|+..+|
T Consensus 82 Lr~L~~~g~l~~~~~~~~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~r~g~-~~~~~~~g 160 (364)
T 3p9c_A 82 LRLLASYNVVTCLVEEGKDGRLSRSYGAAPVCKFLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGG-IPFNKAYG 160 (364)
T ss_dssp HHHHHHTTSEEEEEEECSSSCEEEEEEECGGGGGSSCCTTSCCTHHHHHHHTSHHHHGGGGGHHHHHHHCS-CHHHHHHS
T ss_pred HHHHHhCCCEEEeccccCCCCcCCEEecCHHHHHHcCCCCCCCHHHHHHHhcCHHHHHHHhCHHHHHhhCC-ChHHHhcC
Confidence 6899999999987310 00 26899999999887654 6689998887766677899999999999987 78999999
Q ss_pred CchhhHhhcCccHHHHHHHHhhhhhhhhHHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHh
Q 023384 76 IKFWEFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVA 155 (283)
Q Consensus 76 ~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~ 155 (283)
.++|+++.++|+..+.|+.+|...+......+++ .++ .+++..+|||||||+|.++..+++++|+++++++|+|++++
T Consensus 161 ~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~-~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~ 238 (364)
T 3p9c_A 161 MSAFEYHGTDPRFNRVFNEGMKNHSIIITKKLLE-LYH-GFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVIS 238 (364)
T ss_dssp SCHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH-HCC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHT
T ss_pred CCHHHHHHhCHHHHHHHHHHHHHhhHHHHHHHHH-hcc-cccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHH
Confidence 9999999999999999999999988877777888 775 26778999999999999999999999999999999999999
Q ss_pred cCCCCCCeEEEEcCCCCCCCCceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhh
Q 023384 156 NLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKF 235 (283)
Q Consensus 156 ~a~~~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~ 235 (283)
.+++.+|++|+.+|+++++|..|+|+++++||+|+++++.++|++++++|+| ||+++|+|.+.++............
T Consensus 239 ~a~~~~~v~~~~~D~~~~~p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~ 315 (364)
T 3p9c_A 239 EAPQFPGVTHVGGDMFKEVPSGDTILMKWILHDWSDQHCATLLKNCYDALPA---HGKVVLVQCILPVNPEANPSSQGVF 315 (364)
T ss_dssp TCCCCTTEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCT---TCEEEEEECCBCSSCCSSHHHHHHH
T ss_pred hhhhcCCeEEEeCCcCCCCCCCCEEEehHHhccCCHHHHHHHHHHHHHHcCC---CCEEEEEEeccCCCCCcchhhhhHH
Confidence 9988889999999999987767999999999999999999999999999999 8999999999887644321112235
Q ss_pred hccccccc-ccCCccCCHHHHHHHHHHCCCCeeeEEEcCCcceEEEEeC
Q 023384 236 LFDIVMSV-NATGKERTESEWAKLFFDACFSHYKITPIFGMRFLIEIYP 283 (283)
Q Consensus 236 ~~~~~~~~-~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 283 (283)
.+|+.|+. ..+|++||.+||+++|++|||+.+++.+.++..++||++|
T Consensus 316 ~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~~~~~~~vie~~k 364 (364)
T 3p9c_A 316 HVDMIMLAHNPGGRERYEREFQALARGAGFTGVKSTYIYANAWAIEFTK 364 (364)
T ss_dssp HHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred HhHHHHHhcccCCccCCHHHHHHHHHHCCCceEEEEEcCCceEEEEEeC
Confidence 67888885 4689999999999999999999999999999999999987
No 3
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=100.00 E-value=3.8e-45 Score=323.89 Aligned_cols=277 Identities=28% Similarity=0.492 Sum_probs=240.4
Q ss_pred CccccccCeeEeeccC--CC--CceEecchhcchhhcC-CCCChhhhhhhhcCccchhhhhhHHHhhccCCcchhHHhhC
Q 023384 1 MRLLVHSGCFKKTKVN--GQ--EEAYGLTAASTLLIKD-KPYCLSPTVSVFVDPFFVAPYQSLSSWFKGAELTLWETVHG 75 (283)
Q Consensus 1 Lr~L~~~g~l~~~~~~--~~--~~~y~~t~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g 75 (283)
||+|+++|+|++.... .+ ++.|++|+.++.|+.+ ++.++++++.+..++.++..|.+|.+++++|. ++|+..+|
T Consensus 84 Lr~L~~~gll~~~~~~~~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~g~-~~~~~~~g 162 (368)
T 3reo_A 84 LRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLLATDKVLLEPWFYLKDAILEGG-IPFNKAYG 162 (368)
T ss_dssp HHHHHHTTSEEEEEEECTTSCEEEEEEECTTHHHHSCCTTSCCSHHHHHHHTCHHHHGGGGGHHHHHHHCS-CHHHHHSS
T ss_pred HHHHHhCCCeEEecccCCCCcccceeCcCHHHHHHhCCCCCCCHHHHHHHhcCHHHHhhhhchHHHHhcCC-CHHHHHhC
Confidence 6899999999986200 00 2689999999977654 46789999888766677899999999999987 78999999
Q ss_pred CchhhHhhcCccHHHHHHHHhhhhhhhhHHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHh
Q 023384 76 IKFWEFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVA 155 (283)
Q Consensus 76 ~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~ 155 (283)
.++|+|+.++|+..+.|..+|...+......+++ .++ .+++..+|||||||+|.++..+++++|+++++++|+|++++
T Consensus 163 ~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~-~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~ 240 (368)
T 3reo_A 163 MNIFDYHGTDHRINKVFNKGMSSNSTITMKKILE-MYN-GFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQ 240 (368)
T ss_dssp SCHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHT-TCC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHT
T ss_pred CCHHHHHhhCHHHHHHHHHHHHhhhhhHHHHHHH-hcc-cccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHH
Confidence 9999999999999999999999988877777787 665 26777999999999999999999999999999999999999
Q ss_pred cCCCCCCeEEEEcCCCCCCCCceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhh
Q 023384 156 NLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKF 235 (283)
Q Consensus 156 ~a~~~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~ 235 (283)
.+++..+++++.+|+++++|..|+|+++++||+|+++++.++|++++++|+| ||+++|+|.+.++....+.......
T Consensus 241 ~a~~~~~v~~~~~d~~~~~p~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~ 317 (368)
T 3reo_A 241 DAPAFSGVEHLGGDMFDGVPKGDAIFIKWICHDWSDEHCLKLLKNCYAALPD---HGKVIVAEYILPPSPDPSIATKVVI 317 (368)
T ss_dssp TCCCCTTEEEEECCTTTCCCCCSEEEEESCGGGBCHHHHHHHHHHHHHHSCT---TCEEEEEECCCCSSCCCCHHHHHHH
T ss_pred hhhhcCCCEEEecCCCCCCCCCCEEEEechhhcCCHHHHHHHHHHHHHHcCC---CCEEEEEEeccCCCCCCchhhhHHH
Confidence 9988889999999999987767999999999999999999999999999999 8999999999887654321222335
Q ss_pred hcccccccc-cCCccCCHHHHHHHHHHCCCCeeeEEEcCCcceEEEEeC
Q 023384 236 LFDIVMSVN-ATGKERTESEWAKLFFDACFSHYKITPIFGMRFLIEIYP 283 (283)
Q Consensus 236 ~~~~~~~~~-~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 283 (283)
.+|+.|+.. .++++||.+||+++|++|||+.+++.+..+..++||++|
T Consensus 318 ~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~~~~~~~vie~~k 366 (368)
T 3reo_A 318 HTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLK 366 (368)
T ss_dssp HHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred hhhHHHHhhcCCCccCCHHHHHHHHHHCCCeeeEEEEeCCCcEEEEEEe
Confidence 678888765 489999999999999999999999999988899999986
No 4
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=100.00 E-value=4.7e-44 Score=314.89 Aligned_cols=267 Identities=24% Similarity=0.416 Sum_probs=237.5
Q ss_pred CccccccCeeEeeccCCCCceEecchhcchhhcCCCCChhhhhhhhcCccchhhhhhHHHhhccCCcchhHHhhCCchhh
Q 023384 1 MRLLVHSGCFKKTKVNGQEEAYGLTAASTLLIKDKPYCLSPTVSVFVDPFFVAPYQSLSSWFKGAELTLWETVHGIKFWE 80 (283)
Q Consensus 1 Lr~L~~~g~l~~~~~~~~~~~y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~ 80 (283)
||+|+++|+|++ . ++.|++|+.++.|.++++.++.+++.+..++..+..|.+|++++++|. ++|+..+|.++|+
T Consensus 76 Lr~l~~~g~l~~-~----~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~ 149 (348)
T 3lst_A 76 LRLLAVRDVVRE-S----DGRFALTDKGAALRSDSPVPARAGILMFTDTMFWTMSHRVASALGPER-PAFADIFGSSLDA 149 (348)
T ss_dssp HHHHHHTTSEEE-E----TTEEEECTTTGGGSTTSSSCSHHHHHHHTSHHHHHHHHTHHHHTCTTC-CCHHHHHSSCHHH
T ss_pred HHHHHhCCCEEe-c----CCEEecCHHHHHHhcCCCccHHHHHHHhcCHHHHHHHHHHHHHHhcCC-ChhhHHhCCCHHH
Confidence 689999999999 4 699999999998888888889998887766557899999999999987 6788899999999
Q ss_pred HhhcCccHHHHHHHHhhhhhhhhHHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC-
Q 023384 81 FMNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPE- 159 (283)
Q Consensus 81 ~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~- 159 (283)
++.++|+..+.|...|..........+++ .++ +++..+|||||||+|.++..+++++|+++++++|+++++...+.
T Consensus 150 ~~~~~~~~~~~f~~~m~~~~~~~~~~~~~-~~~--~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~~~~~ 226 (348)
T 3lst_A 150 YFDGDAEVEALYYEGMETVSAAEHLILAR-AGD--FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLD 226 (348)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHTTHHHHHH-HSC--CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTTCCCC
T ss_pred HHHhCHHHHHHHHHHHHHhhhhhHHHHHH-hCC--ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhccccc
Confidence 99999999999999999988888888888 887 78889999999999999999999999999999999888773321
Q ss_pred ----CCCeEEEEcCCCCCCCCceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhh
Q 023384 160 ----ADNLKYIAGDMFQFIPPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKF 235 (283)
Q Consensus 160 ----~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~ 235 (283)
.+|++++.+|+++++|.||+|+++++||+|+|+++.++|++++++||| ||+++|.|.+.++..... ...
T Consensus 227 ~~~~~~~v~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~Lkp---gG~l~i~e~~~~~~~~~~----~~~ 299 (348)
T 3lst_A 227 APDVAGRWKVVEGDFLREVPHADVHVLKRILHNWGDEDSVRILTNCRRVMPA---HGRVLVIDAVVPEGNDAH----QSK 299 (348)
T ss_dssp CGGGTTSEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHTCCT---TCEEEEEECCBCSSSSCC----HHH
T ss_pred ccCCCCCeEEEecCCCCCCCCCcEEEEehhccCCCHHHHHHHHHHHHHhcCC---CCEEEEEEeccCCCCCcc----hhh
Confidence 578999999999877799999999999999999999999999999999 899999999887764321 234
Q ss_pred hcccccccccCCccCCHHHHHHHHHHCCCCeeeEEEcCCcceEEEEeC
Q 023384 236 LFDIVMSVNATGKERTESEWAKLFFDACFSHYKITPIFGMRFLIEIYP 283 (283)
Q Consensus 236 ~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 283 (283)
..++.|+...++++++.+||+++|+++||+++++++..+..++|+++|
T Consensus 300 ~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~p 347 (348)
T 3lst_A 300 EMDFMMLAARTGQERTAAELEPLFTAAGLRLDRVVGTSSVMSIAVGVP 347 (348)
T ss_dssp HHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEEEECSSSCEEEEEEE
T ss_pred hcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEEEECCCCcEEEEEEe
Confidence 677888777889999999999999999999999999777899999986
No 5
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=100.00 E-value=1.2e-43 Score=314.54 Aligned_cols=267 Identities=28% Similarity=0.514 Sum_probs=239.6
Q ss_pred CccccccCeeEeeccCCCCce-EecchhcchhhcCCCCChhhhhhhhcCccchhhhhhHHHhhccCCcchhHHhhCCchh
Q 023384 1 MRLLVHSGCFKKTKVNGQEEA-YGLTAASTLLIKDKPYCLSPTVSVFVDPFFVAPYQSLSSWFKGAELTLWETVHGIKFW 79 (283)
Q Consensus 1 Lr~L~~~g~l~~~~~~~~~~~-y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~ 79 (283)
||+|++.|+|++++ ++. |++|+.++.|.++++.++.+++.+..++..+..|.+|.++++++. ++|...+|.++|
T Consensus 92 Lr~L~~~g~l~~~~----~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~ 166 (369)
T 3gwz_A 92 LRLLATVGVFDDLG----HDDLFAQNALSAVLLPDPASPVATDARFQAAPWHWRAWEQLTHSVRTGE-ASFDVANGTSFW 166 (369)
T ss_dssp HHHHHHTTSSEECS----STTEEECCHHHHTTSCCTTCHHHHHHHHHHSHHHHHHHHTHHHHHHHSS-CSHHHHHSSCHH
T ss_pred HHHHHhCCCEEEeC----CCceEecCHHHHHHhcCCchhHHHHHHHcCCHHHHHHHHhHHHHHhCCC-ChhHhhcCCCHH
Confidence 68999999999976 578 999999998888888888888888766556789999999999987 678889999999
Q ss_pred hHhhcCccHHHHHHHHhhhhhhhhHHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC
Q 023384 80 EFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPE 159 (283)
Q Consensus 80 ~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~ 159 (283)
+++.++|+..+.|...|........+.+++ .++ +++..+|||||||+|.++..+++++|+++++++|+|.+++.+++
T Consensus 167 ~~~~~~~~~~~~f~~~m~~~~~~~~~~l~~-~~~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~ 243 (369)
T 3gwz_A 167 QLTHEDPKARELFNRAMGSVSLTEAGQVAA-AYD--FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLERPPVAEEARE 243 (369)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHHHH-HSC--CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHH
T ss_pred HHHHhCHHHHHHHHHHHHHHHhhhHHHHHH-hCC--CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcCHHHHHHHHH
Confidence 999999999999999999988887888888 787 77889999999999999999999999999999999888877764
Q ss_pred -------CCCeEEEEcCCCCCCC-CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhh
Q 023384 160 -------ADNLKYIAGDMFQFIP-PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELT 231 (283)
Q Consensus 160 -------~~rv~~~~~d~~~~~p-~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~ 231 (283)
.+||+++.+|+++++| .||+|+++++||+|+++++.++|++++++|+| ||+++|+|.+.++.....
T Consensus 244 ~~~~~~l~~~v~~~~~d~~~~~p~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~p---gG~l~i~e~~~~~~~~~~--- 317 (369)
T 3gwz_A 244 LLTGRGLADRCEILPGDFFETIPDGADVYLIKHVLHDWDDDDVVRILRRIATAMKP---DSRLLVIDNLIDERPAAS--- 317 (369)
T ss_dssp HHHHTTCTTTEEEEECCTTTCCCSSCSEEEEESCGGGSCHHHHHHHHHHHHTTCCT---TCEEEEEEEBCCSSCCHH---
T ss_pred hhhhcCcCCceEEeccCCCCCCCCCceEEEhhhhhccCCHHHHHHHHHHHHHHcCC---CCEEEEEEeccCCCCCCc---
Confidence 4789999999998777 69999999999999999999999999999999 899999999988765431
Q ss_pred hhhhhcccccccccCCccCCHHHHHHHHHHCCCCeeeEEE-cCCcceEEEEeC
Q 023384 232 ETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKITP-IFGMRFLIEIYP 283 (283)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~-~~~~~~~i~~~~ 283 (283)
....++.|+...++++||.+||+++|+++||+++++++ ..+..++||++|
T Consensus 318 --~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 318 --TLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp --HHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEEEECSSSSEEEEEEEE
T ss_pred --hhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEEEECCCCCcEEEEEEe
Confidence 34778888877899999999999999999999999999 577899999986
No 6
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=100.00 E-value=1.6e-42 Score=305.53 Aligned_cols=277 Identities=47% Similarity=0.879 Sum_probs=237.6
Q ss_pred CccccccCeeEeeccCCCCceEecchhcchhhcCCCCChhhhhhhhcCccchhhhhhHHHhhc-cCCcchhHHhhCCchh
Q 023384 1 MRLLVHSGCFKKTKVNGQEEAYGLTAASTLLIKDKPYCLSPTVSVFVDPFFVAPYQSLSSWFK-GAELTLWETVHGIKFW 79 (283)
Q Consensus 1 Lr~L~~~g~l~~~~~~~~~~~y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~~~g~~~~ 79 (283)
||+|+++|+|++... +++.|++|+.+++|.+++|.++.+++.+..++..+..|.+|+++++ +|. ++|+..+|.++|
T Consensus 75 Lr~L~~~gll~~~~~--~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~g~-~~~~~~~g~~~~ 151 (352)
T 1fp2_A 75 MRYLAHNGFFEIITK--EEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDL-TLFGVTLGSGFW 151 (352)
T ss_dssp HHHHHHTTSEEEEES--SSEEEEECHHHHTTSTTSSSCCHHHHHHHTCHHHHHGGGGHHHHHTCSSC-CHHHHHHSSCHH
T ss_pred HHHHHhCCeEEEecC--CCCeEeCCHHHHHHhCCCCccHHHHHHHhcCchHHHHHHHHHHHHHhcCC-ChHHHHcCCCHH
Confidence 588999999998820 0589999999999998888889999988766667889999999999 665 789999999999
Q ss_pred hHhhcCccHHHHHHHHhhhhhhhhHHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC
Q 023384 80 EFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPE 159 (283)
Q Consensus 80 ~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~ 159 (283)
+++.++|+..+.|...|........+. ++ .+++.+++..+|||||||+|.++..+++++|+++++++|+|.+++.+++
T Consensus 152 ~~~~~~~~~~~~f~~~m~~~~~~~~~~-~~-~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~ 229 (352)
T 1fp2_A 152 DFLDKNPEYNTSFNDAMASDSKLINLA-LR-DCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSG 229 (352)
T ss_dssp HHHHHCHHHHHHHHHHHHHTHHHHHHH-HH-TCHHHHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCC
T ss_pred HHHHhChHHHHHHHHHHHhcchhhhhH-HH-hcccccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeCHHHHhhccc
Confidence 999999999999999999888776666 77 7733377889999999999999999999999999999999999998887
Q ss_pred CCCeEEEEcCCCCCCCCceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhccc
Q 023384 160 ADNLKYIAGDMFQFIPPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDI 239 (283)
Q Consensus 160 ~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~ 239 (283)
..+++++.+|+++++|.||+|+++++||+|+++++.++|++++++|+|+++||+++|.|...++....+........+++
T Consensus 230 ~~~v~~~~~d~~~~~p~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~ 309 (352)
T 1fp2_A 230 SNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDV 309 (352)
T ss_dssp BTTEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHH
T ss_pred CCCcEEEeccccCCCCCccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccH
Confidence 66799999999988888999999999999999999999999999999721159999999998765432111122346677
Q ss_pred ccccccCCccCCHHHHHHHHHHCCCCeeeEEEcCCcceEEEEeC
Q 023384 240 VMSVNATGKERTESEWAKLFFDACFSHYKITPIFGMRFLIEIYP 283 (283)
Q Consensus 240 ~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 283 (283)
.|+. .++++|+.++|+++++++||+.+++++.++..++||++|
T Consensus 310 ~~~~-~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 352 (352)
T 1fp2_A 310 NMAC-LNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352 (352)
T ss_dssp HGGG-GTCCCEEHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred HHHh-ccCCCCCHHHHHHHHHHCCCCeeEEEecCCCcEEEEEeC
Confidence 7776 568899999999999999999999999888889999987
No 7
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=100.00 E-value=1.1e-42 Score=307.41 Aligned_cols=281 Identities=48% Similarity=0.835 Sum_probs=239.6
Q ss_pred CccccccCeeEee-----c-cCCCCceEecchhcchhhcCCCCChhhhhhhhcCccchhhhhhHHHhhccCC-cchhHHh
Q 023384 1 MRLLVHSGCFKKT-----K-VNGQEEAYGLTAASTLLIKDKPYCLSPTVSVFVDPFFVAPYQSLSSWFKGAE-LTLWETV 73 (283)
Q Consensus 1 Lr~L~~~g~l~~~-----~-~~~~~~~y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~ 73 (283)
||+|+++|+|++. + .++.++.|++|+.+++|+++++.++++++.+..++..+..|.+|++++++++ .++|+..
T Consensus 69 Lr~L~~~gll~~~~~~~~~~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~~ 148 (358)
T 1zg3_A 69 LRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSSLDMWSSSKKWFNEDKEQTLFECA 148 (358)
T ss_dssp HHHHHHTTSEEEEEECCSSSSCCCEEEEEECHHHHTTCTTSTTCCHHHHHHHTSHHHHGGGGGHHHHHHCSCCCCHHHHH
T ss_pred HHHHhhCCcEEEecccccccCCCCCCEEeCCHHHHHHhCCCCccHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChHHHH
Confidence 6899999999987 2 1000278999999999998888889999988766667889999999999883 2789989
Q ss_pred hCCchhhHhhcCccHHH--HHHHHhhhhhhhhHHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeech
Q 023384 74 HGIKFWEFMNQNPGINQ--RFNEAMASDTEILTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLP 151 (283)
Q Consensus 74 ~g~~~~~~~~~~~~~~~--~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~ 151 (283)
+|.++|+++.++|+..+ .|+..|........ .+++ .+++.+++..+|||||||+|.++..+++++|+++++++|+|
T Consensus 149 ~g~~~~~~~~~~p~~~~~~~f~~~m~~~~~~~~-~~~~-~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~ 226 (358)
T 1zg3_A 149 TGESFWDFLNKDSESSTLSMFQDAMASDSRMFK-LVLQ-ENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQP 226 (358)
T ss_dssp HSSCHHHHHTSGGGHHHHHHHHHHHHHHHHTHH-HHHH-HTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECH
T ss_pred hCCCHHHHHhcChhhhhHHHHHHHHhcccHHHH-HHHH-hcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccH
Confidence 99999999999999999 99999998877666 7777 77333777899999999999999999999999999999999
Q ss_pred HHHhcCCCCCCeEEEEcCCCCCCCCceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhh
Q 023384 152 HVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELT 231 (283)
Q Consensus 152 ~~~~~a~~~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~ 231 (283)
.+++.+++..+++++.+|+++++|.||+|+++++||+|+|+++.++|++++++|+|+++||+++|+|...++....+...
T Consensus 227 ~~~~~a~~~~~v~~~~~d~~~~~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~ 306 (358)
T 1zg3_A 227 QVVGNLTGNENLNFVGGDMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLT 306 (358)
T ss_dssp HHHSSCCCCSSEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHH
T ss_pred HHHhhcccCCCcEEEeCccCCCCCCceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhh
Confidence 99988887667999999999988889999999999999999999999999999997111599999999987765431111
Q ss_pred hhhhhcccccccccCCccCCHHHHHHHHHHCCCCeeeEEEcCCcceEEEEeC
Q 023384 232 ETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKITPIFGMRFLIEIYP 283 (283)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 283 (283)
.....+++.|+...++++|+.++|+++|+++||+++++++.++..++||++|
T Consensus 307 ~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 358 (358)
T 1zg3_A 307 ELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVYP 358 (358)
T ss_dssp HHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEEEEEETTTEEEEEEEC
T ss_pred hHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCeeEEEecCCCcEEEEEeC
Confidence 2345677877776789999999999999999999999999888889999987
No 8
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=100.00 E-value=1.2e-43 Score=310.39 Aligned_cols=264 Identities=24% Similarity=0.353 Sum_probs=231.7
Q ss_pred CccccccCeeEeeccCCCCceEecchhcchhhcCCCCChhhhhhhhcCccch-hhhhhHHHhhccCCcchhHHhhCCchh
Q 023384 1 MRLLVHSGCFKKTKVNGQEEAYGLTAASTLLIKDKPYCLSPTVSVFVDPFFV-APYQSLSSWFKGAELTLWETVHGIKFW 79 (283)
Q Consensus 1 Lr~L~~~g~l~~~~~~~~~~~y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~~~~g~~~~ 79 (283)
||+|++.|+|++++ ++.|++|+.++.|.++++.++.+++.+..+...+ ..|.+|+++++++. ++|...+|.++|
T Consensus 59 Lr~l~~~gl~~~~~----~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~g~~~~ 133 (332)
T 3i53_A 59 LRHLVAVGLFTRDG----QGVYGLTEFGEQLRDDHAAGKRKWLDMNSAVGRGDLGFVELAHSIRTGQ-PAYPVRYGTSFW 133 (332)
T ss_dssp HHHHHHTTSEEECT----TSBEEECTTGGGGSTTCTTCCHHHHCTTSHHHHHGGGGGGHHHHHHHSS-CSHHHHHSSCHH
T ss_pred HHHHHhCCcEEecC----CCeEEcCHhHHHHhcCCchhHHHHHHHcCCHhHHHHHHHHhHHHHhcCC-CHHHHhhCCCHH
Confidence 68899999999986 6899999999988888877888888876543345 78999999999987 678888999999
Q ss_pred hHhhcCccHHHHHHHHhhhhhhhhHHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC
Q 023384 80 EFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPE 159 (283)
Q Consensus 80 ~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~ 159 (283)
+++.++|+..+.|...|........+.+++ .++ +++..+|||||||+|.++..+++++|+++++++|+|++++.+++
T Consensus 134 ~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~-~~~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~ 210 (332)
T 3i53_A 134 EDLGSDPVLSASFDTLMSHHLELDYTGIAA-KYD--WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHR 210 (332)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHTTGGG-SSC--CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHH
T ss_pred HHHHhCHHHHHHHHHHHHHhHHhhHHHHHH-hCC--CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecCHHHHHHHHH
Confidence 999999999999999999887766666777 666 66778999999999999999999999999999999888877764
Q ss_pred -------CCCeEEEEcCCCCCCC-CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhh
Q 023384 160 -------ADNLKYIAGDMFQFIP-PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELT 231 (283)
Q Consensus 160 -------~~rv~~~~~d~~~~~p-~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~ 231 (283)
.+|++|+.+|+++++| +||+|+++++||+|+++++.++|++++++|+| ||+++|.|.+.++. .+
T Consensus 211 ~~~~~~~~~~v~~~~~d~~~~~p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~--~~--- 282 (332)
T 3i53_A 211 RFLDTGLSGRAQVVVGSFFDPLPAGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGS---GGVVLVIEAVAGDE--HA--- 282 (332)
T ss_dssp HHHHTTCTTTEEEEECCTTSCCCCSCSEEEEESCGGGSCHHHHHHHHHHHHHHHTT---TCEEEEEECCCC-----C---
T ss_pred hhhhcCcCcCeEEecCCCCCCCCCCCcEEEEehhhccCCHHHHHHHHHHHHHhcCC---CCEEEEEeecCCCC--Cc---
Confidence 4789999999998777 69999999999999999999999999999999 89999999988766 21
Q ss_pred hhhhhcccccccccCCccCCHHHHHHHHHHCCCCeeeEEEcCCcceEEEEeC
Q 023384 232 ETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKITPIFGMRFLIEIYP 283 (283)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 283 (283)
...+++.|+...++++||.+||+++|+++||+++++++.++ .++||++|
T Consensus 283 --~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~-~~vie~r~ 331 (332)
T 3i53_A 283 --GTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHPISY-VSIVEMTA 331 (332)
T ss_dssp --CHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEECSS-SEEEEEEE
T ss_pred --cHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEECCC-cEEEEEee
Confidence 24677788777889999999999999999999999999888 99999985
No 9
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=100.00 E-value=7e-42 Score=303.60 Aligned_cols=276 Identities=29% Similarity=0.501 Sum_probs=223.7
Q ss_pred CccccccCeeEee----ccCCC--CceEecchhcchhhcCCC-CChhhhhhhhcCccchhhhhhHHHhhccCCcchhHHh
Q 023384 1 MRLLVHSGCFKKT----KVNGQ--EEAYGLTAASTLLIKDKP-YCLSPTVSVFVDPFFVAPYQSLSSWFKGAELTLWETV 73 (283)
Q Consensus 1 Lr~L~~~g~l~~~----~~~~~--~~~y~~t~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 73 (283)
||+|+++|+|++. +. | .+.|++|+.+++|.++++ .++++++.+..++..+..|.+|+++++++..++|+..
T Consensus 89 Lr~L~~~gll~~~~~~~~~--g~~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~ 166 (372)
T 1fp1_D 89 LRLLASYSVLTSTTRTIED--GGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNV 166 (372)
T ss_dssp HHHHHHTTSEEEEEEECTT--SCEEEEEEECTTGGGGSTTCTTCCCTHHHHHHTCHHHHHHHTTHHHHHHSCC-------
T ss_pred HHHHhhCCceEecccccCC--CCcCCeEecCHHHHHHhCCCCCCCHHHHHHHhcCchHHHHHHHHHHHHHcCCCChhHHH
Confidence 6899999999987 21 1 258999999999998877 6889998887666678899999999999833788888
Q ss_pred hCCchhhHhhcCccHHHHHHHHhhhhhhhhHHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHH
Q 023384 74 HGIKFWEFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHV 153 (283)
Q Consensus 74 ~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~ 153 (283)
+|.++|+++.++|+..+.|...|..........+++ .++ .+++..+|||||||+|.++..+++++|+++++++|+|.+
T Consensus 167 ~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~l~~-~~~-~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~ 244 (372)
T 1fp1_D 167 HGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLE-IYT-GFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQV 244 (372)
T ss_dssp -------CCSSCHHHHHHHHHHHHHHHHHHHHHHHH-HCC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHH
T ss_pred hCCCHHHHHHhCHHHHHHHHHHHHhhhHHHHHHHHH-Hhh-ccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHH
Confidence 999999999999999999999999888777777887 664 256778999999999999999999999999999999999
Q ss_pred HhcCCCCCCeEEEEcCCCCCCCCceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhh
Q 023384 154 VANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTET 233 (283)
Q Consensus 154 ~~~a~~~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~ 233 (283)
++.+++..+++++.+|+++++|.||+|++.++||+|+++++.++|++++++|+| ||+++|.|...++....+.....
T Consensus 245 ~~~a~~~~~v~~~~~d~~~~~~~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~ 321 (372)
T 1fp1_D 245 IENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSP---NGKVIIVEFILPEEPNTSEESKL 321 (372)
T ss_dssp HTTCCCCTTEEEEECCTTTCCCCEEEEEEESSGGGSCHHHHHHHHHHHHHHEEE---EEEEEEEEEEECSSCCSSHHHHH
T ss_pred HHhhhhcCCCEEEeCCcccCCCCCCEEEEecccccCCHHHHHHHHHHHHHhcCC---CCEEEEEEeccCCCCccchHHHH
Confidence 998887678999999999987789999999999999999999999999999999 89999999998776432100012
Q ss_pred hhhcccccccccCCccCCHHHHHHHHHHCCCCeeeEEEc-CCcceEEEEeC
Q 023384 234 KFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKITPI-FGMRFLIEIYP 283 (283)
Q Consensus 234 ~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~-~~~~~~i~~~~ 283 (283)
....++.|+...++++|+.++|+++|+++||+++++.+. ++..++||++|
T Consensus 322 ~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~vie~~~ 372 (372)
T 1fp1_D 322 VSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372 (372)
T ss_dssp HHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEEEEEEETTTEEEEEEEC
T ss_pred HHHhhHHHHhccCCccCCHHHHHHHHHHCCCceEEEEEcCCCCeEEEEEeC
Confidence 346677776656789999999999999999999999884 55249999987
No 10
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5.4e-42 Score=300.15 Aligned_cols=264 Identities=26% Similarity=0.419 Sum_probs=232.3
Q ss_pred CccccccCeeEeeccCCCCceEecchhcchhhcCCCCChhhhhhhhcCccchhhhhhHHHhhccCCcchhHHhhCCchhh
Q 023384 1 MRLLVHSGCFKKTKVNGQEEAYGLTAASTLLIKDKPYCLSPTVSVFVDPFFVAPYQSLSSWFKGAELTLWETVHGIKFWE 80 (283)
Q Consensus 1 Lr~L~~~g~l~~~~~~~~~~~y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~ 80 (283)
||+|++.|+|++.+ ++.|++|+.++.|. ++|.++.+++.+..++.. ..|.+|+++++++. ++|+..+|.++|+
T Consensus 62 Lr~L~~~g~l~~~~----~~~y~~t~~s~~l~-~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~-~~~~~~~g~~~~~ 134 (334)
T 2ip2_A 62 MRLLVAFEIFQGDT----RDGYANTPTSHLLR-DVEGSFRDMVLFYGEEFH-AAWTPACEALLSGT-PGFELAFGEDFYS 134 (334)
T ss_dssp HHHHHHTTSEEEET----TTEEEECHHHHTTS-SSTTCSHHHHHHHTTHHH-HHTTTHHHHHHHCC-CHHHHHHSSCHHH
T ss_pred HHHHHhCCceEecC----CCeEecCHHHHHHh-CCCccHHHHHHHhcCchh-hHHHHHHHHHhcCC-ChhhhhcCCCHHH
Confidence 68999999999986 58999999999888 777788999888765444 88999999999987 7888889999999
Q ss_pred HhhcCccHHHHHHHHhhhhhhhhHHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC-
Q 023384 81 FMNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPE- 159 (283)
Q Consensus 81 ~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~- 159 (283)
++.++|+..+.|...| ..+....+.+++ .++ +++ .+|||||||+|..+..+++++|+.+++++|++.+++.+++
T Consensus 135 ~~~~~~~~~~~f~~~m-~~~~~~~~~~~~-~~~--~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~ 209 (334)
T 2ip2_A 135 YLKRCPDAGRRFLLAM-KASNLAFHEIPR-LLD--FRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDN 209 (334)
T ss_dssp HHHHCHHHHHHHHHHH-GGGHHHHHHHHH-HSC--CTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHH
T ss_pred HHhhChHHHHHHHHHH-HHHHHHHHHHHH-hCC--CCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHH
Confidence 9999999999999999 887777788888 777 677 9999999999999999999999999999999777776654
Q ss_pred ------CCCeEEEEcCCCCCCCC-ceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhh
Q 023384 160 ------ADNLKYIAGDMFQFIPP-ADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTE 232 (283)
Q Consensus 160 ------~~rv~~~~~d~~~~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~ 232 (283)
.++++++.+|+++++|. ||+|++.+++|+|+++++.++|++++++|+| ||+++|.|...++.... .
T Consensus 210 ~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~----~ 282 (334)
T 2ip2_A 210 LSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAG---DGRVVVIERTISASEPS----P 282 (334)
T ss_dssp THHHHHTTSEEEEESCTTTCCCSSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCT---TCEEEEEECCBCSSSCC----H
T ss_pred HhhcCCCCcEEEecCCCCCCCCCCCCEEEEchhccCCCHHHHHHHHHHHHHhcCC---CCEEEEEEeccCCCCCc----c
Confidence 47899999999997765 9999999999999999999999999999999 89999999988765432 1
Q ss_pred hhhhcccccccccCCccCCHHHHHHHHHHCCCCeeeEEEcCCcceEEEEeC
Q 023384 233 TKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKITPIFGMRFLIEIYP 283 (283)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 283 (283)
....+++.|+...++++|+.++|+++++++||+++++.+.++..++|+++|
T Consensus 283 ~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 333 (334)
T 2ip2_A 283 MSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIVDLPMETRMIVAAR 333 (334)
T ss_dssp HHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEEETTTEEEEEEEE
T ss_pred hhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEEECCCCCEEEEEEe
Confidence 234667777766789999999999999999999999999888899999986
No 11
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=100.00 E-value=2.8e-39 Score=285.66 Aligned_cols=268 Identities=21% Similarity=0.359 Sum_probs=230.3
Q ss_pred CccccccCeeEeeccCCCCceEecchhcchhhcCCCCChhhhhhhhcCcc-chhhhhhHHHhhccCCcchhHHhhCCchh
Q 023384 1 MRLLVHSGCFKKTKVNGQEEAYGLTAASTLLIKDKPYCLSPTVSVFVDPF-FVAPYQSLSSWFKGAELTLWETVHGIKFW 79 (283)
Q Consensus 1 Lr~L~~~g~l~~~~~~~~~~~y~~t~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~g~~~~ 79 (283)
||+|++.|+|++.. ++.|++|+.+++|.++++.++..++.+..++. .+..|.+|.+.++++. .+++..+|.++|
T Consensus 73 L~~L~~~g~~~~~~----~g~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~ 147 (360)
T 1tw3_A 73 IRHLVAIGLLEEDA----PGEFVPTEVGELLADDHPAAQRAWHDLTQAVARADISFTRLPDAIRTGR-PTYESIYGKPFY 147 (360)
T ss_dssp HHHHHHTTSEEEEE----TTEEEECTTGGGGSTTSTTCHHHHTCTTSHHHHHGGGGGGHHHHHHHCC-CCHHHHHSSCHH
T ss_pred HHHHHHCCCEEecC----CCeEEeCHHHHHHhcCCchhHHHHHHHhcCchhHHHHHHHHHHHHHcCC-CHHHHhcCCCHH
Confidence 68899999999975 68999999999999888888888887765433 5688999999999987 567888899999
Q ss_pred hHhhcCccHHHHHHHHhhhhhhhhHHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC
Q 023384 80 EFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPE 159 (283)
Q Consensus 80 ~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~ 159 (283)
+++..+|+....|...|........+.+++ .++ +....+|||||||+|.++..+++++|+++++++|++.+++.+++
T Consensus 148 ~~~~~~p~~~~~f~~~~~~~~~~~~~~l~~-~~~--~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~ 224 (360)
T 1tw3_A 148 EDLAGRPDLRASFDSLLACDQDVAFDAPAA-AYD--WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARS 224 (360)
T ss_dssp HHHHTCHHHHHHHHHHHTTTTTTTTHHHHH-HSC--CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHH
T ss_pred HHHHhChHHHHHHHHHHHHHHHHhHHHHHH-hCC--CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHH
Confidence 999999999999999999887777778888 777 77788999999999999999999999999999999777776653
Q ss_pred -------CCCeEEEEcCCCCCCCC-ceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeee-cCCCccchhh
Q 023384 160 -------ADNLKYIAGDMFQFIPP-ADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIV-INAEEEEHEL 230 (283)
Q Consensus 160 -------~~rv~~~~~d~~~~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~-~~~~~~~~~~ 230 (283)
.++++++.+|+++++|. ||+|++.+++|+|+++++.++|++++++|+| ||+++|.|.. .++.....
T Consensus 225 ~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~-- 299 (360)
T 1tw3_A 225 YLKDEGLSDRVDVVEGDFFEPLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEP---GGRILIHERDDLHENSFNE-- 299 (360)
T ss_dssp HHHHTTCTTTEEEEECCTTSCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEE---EEEEEEEECCBCGGGCCSH--
T ss_pred HHHhcCCCCceEEEeCCCCCCCCCCccEEEEcccccCCCHHHHHHHHHHHHHhcCC---CcEEEEEEEeccCCCCCcc--
Confidence 35899999999987765 9999999999999999999999999999999 8999999988 65543221
Q ss_pred hhhhhhcccccccccCCccCCHHHHHHHHHHCCCCeeeEEEcCCc-----ceEEEEeC
Q 023384 231 TETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKITPIFGM-----RFLIEIYP 283 (283)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~-----~~~i~~~~ 283 (283)
....+++.|+...+++.++.++|+++|+++||+++++.+.++. .++|+++|
T Consensus 300 --~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (360)
T 1tw3_A 300 --QFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQLPSPTIPYDLSLLVLAP 355 (360)
T ss_dssp --HHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEEEECSSSSCEEEEEEEEE
T ss_pred --hhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEEeCCCCcccCccEEEEEEe
Confidence 2335677776666889999999999999999999999887655 78999975
No 12
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=100.00 E-value=3.2e-39 Score=286.73 Aligned_cols=268 Identities=21% Similarity=0.307 Sum_probs=226.7
Q ss_pred CccccccCeeEeeccCCCCc--eEecchhcchhhcCCCCChhhhhhhhcCccch-hhhhhHHHhhccCCcchhHHhhCCc
Q 023384 1 MRLLVHSGCFKKTKVNGQEE--AYGLTAASTLLIKDKPYCLSPTVSVFVDPFFV-APYQSLSSWFKGAELTLWETVHGIK 77 (283)
Q Consensus 1 Lr~L~~~g~l~~~~~~~~~~--~y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~~~~g~~ 77 (283)
||+|++.|+|++.. ++ .|++|+.+++|.++++.++.+++.+..++..+ ..|.+|.++++++. ++|...+|.+
T Consensus 70 Lr~L~~~Gll~~~~----~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~g~~ 144 (374)
T 1qzz_A 70 VRHLTVVGVLEGGE----KQGRPLRPTRLGMLLADGHPAQQRAWLDLNGAVSHADLAFTGLLDVVRTGR-PAYAGRYGRP 144 (374)
T ss_dssp HHHHHHTTSEECCC----C-CCCCEECTTGGGGSTTCTTCHHHHHCTTSHHHHHHGGGGGHHHHHHHSC-CSHHHHHSSC
T ss_pred HHHHhhCCCEEEeC----CCCeEEEEChHHHhhcCCCcccHHHHHHHcCChhhHHHHHHHHHHHHhcCC-ChhhhhhCCC
Confidence 68999999999865 56 89999999999988888888888876543456 88999999999987 5688889999
Q ss_pred hhhHhhcCccHHHHHHHHhhhhhhhhHHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcC
Q 023384 78 FWEFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANL 157 (283)
Q Consensus 78 ~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a 157 (283)
+|+++..+|+....|...|........+.+++ .++ ++...+|||||||+|.++..+++.+|+++++++|++.+++.+
T Consensus 145 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~-~~~--~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a 221 (374)
T 1qzz_A 145 FWEDLSADVALADSFDALMSCDEDLAYEAPAD-AYD--WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERA 221 (374)
T ss_dssp HHHHHHHCHHHHHHHHHTCGGGSTTTTHHHHH-TSC--CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHH
T ss_pred HHHHHhhChHHHHHHHHHHHHhhHhHHHHHHH-hCC--CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHH
Confidence 99999999999999999999887777777888 776 677899999999999999999999999999999998788766
Q ss_pred CC-------CCCeEEEEcCCCCCCCC-ceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee--ecCCCccc
Q 023384 158 PE-------ADNLKYIAGDMFQFIPP-ADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI--VINAEEEE 227 (283)
Q Consensus 158 ~~-------~~rv~~~~~d~~~~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~--~~~~~~~~ 227 (283)
++ .++++++.+|+++++|. ||+|++.+++|+|+++++.++|++++++|+| ||+++|.|. ..++....
T Consensus 222 ~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~ 298 (374)
T 1qzz_A 222 RRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEP---GGRLLVLDRADVEGDGADR 298 (374)
T ss_dssp HHHHHHTTCTTTEEEEECCTTSCCSCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEE---EEEEEEEECCH-------H
T ss_pred HHHHHhcCCCCceEEEeCCCCCcCCCCCCEEEEeccccCCCHHHHHHHHHHHHHhcCC---CcEEEEEechhhcCCCCCc
Confidence 54 35899999999987765 9999999999999999999999999999999 899999998 76654322
Q ss_pred hhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCeeeEEEcCCcc-----eEEEEeC
Q 023384 228 HELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKITPIFGMR-----FLIEIYP 283 (283)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~-----~~i~~~~ 283 (283)
.....+++.|+...+++.++.++|.++|+++||+++++...++.. ++|+++|
T Consensus 299 ----~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (374)
T 1qzz_A 299 ----FFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASERTSGSTTLPFDFSILEFTA 355 (374)
T ss_dssp ----HHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEEEEECCSSCSSCEEEEEEEE
T ss_pred ----chhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEECCCCcccCCcEEEEEEE
Confidence 123456777766668899999999999999999999999887766 9999875
No 13
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=100.00 E-value=9.4e-39 Score=282.52 Aligned_cols=265 Identities=16% Similarity=0.192 Sum_probs=210.5
Q ss_pred CccccccCeeEeeccCCCCceEecchhcchhhcCCCCChhhhhhhhcCccchhhhhhHHHhhccCCcchhHHhhC--Cch
Q 023384 1 MRLLVHSGCFKKTKVNGQEEAYGLTAASTLLIKDKPYCLSPTVSVFVDPFFVAPYQSLSSWFKGAELTLWETVHG--IKF 78 (283)
Q Consensus 1 Lr~L~~~g~l~~~~~~~~~~~y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g--~~~ 78 (283)
||+|+++|+|+++ ++.|++|+.+++|.++++.+ .++.+. .+..++.|.+|++++++++ .++...+| .++
T Consensus 71 Lr~l~~~g~l~~~-----~~~y~~t~~s~~L~~~~~~~--~~~~~~-~~~~~~~~~~L~~~lr~g~-~~~~~~~g~~~~~ 141 (363)
T 3dp7_A 71 LEASLTIGTILLE-----EDRYVLAKAGWFLLNDKMAR--VNMEFN-HDVNYQGLFHLEEALLNGR-PEGLKVFGEWPTI 141 (363)
T ss_dssp HHHHHHHTSEEEE-----TTEEEECHHHHHHHHCHHHH--HHHHHH-HHTTHHHHTTHHHHHHHSS-CGGGGGTCCCSSH
T ss_pred HHHHhhCCCeEec-----CCEEecccchHHhhCCCccc--chheee-cHHhhhhHHHHHHHHhcCC-CccccccCchHhH
Confidence 6899999999986 58999999999998876432 233333 3457899999999999987 45667788 689
Q ss_pred hhHhhcCccHHHH----HHHHhhhhhhhhHHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHH
Q 023384 79 WEFMNQNPGINQR----FNEAMASDTEILTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVV 154 (283)
Q Consensus 79 ~~~~~~~~~~~~~----f~~~m~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~ 154 (283)
|+++.++|+..+. |...|.... ...++. .+. ..+..+|||||||+|.++..+++++|+++++++|+|+++
T Consensus 142 ~~~~~~~~~~~~~~~~~f~~~~~~~~---~~~~l~-~~~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~ 215 (363)
T 3dp7_A 142 YEGLSQLPEQVQKSWFGFDHFYSDQS---FGKALE-IVF--SHHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQL 215 (363)
T ss_dssp HHHGGGSCHHHHHHHHHHHHHTTCCC---CHHHHH-HHG--GGCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHH
T ss_pred HHHHhhCHHHHHHHHHHHHHHhhhhh---HHHHHH-Hhc--ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHH
Confidence 9999999987663 666665432 123444 443 356789999999999999999999999999999998888
Q ss_pred hcCCC-------CCCeEEEEcCCCCC---CC-CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCC
Q 023384 155 ANLPE-------ADNLKYIAGDMFQF---IP-PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINA 223 (283)
Q Consensus 155 ~~a~~-------~~rv~~~~~d~~~~---~p-~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~ 223 (283)
+.+++ .+|++++.+|++++ +| +||+|+++++||+|+++++.++|++++++|+| ||+++|+|.+.++
T Consensus 216 ~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~ 292 (363)
T 3dp7_A 216 EMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGK---DSKVYIMETLWDR 292 (363)
T ss_dssp HHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCT---TCEEEEEECCTTS
T ss_pred HHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEechhhhCCHHHHHHHHHHHHHhcCC---CcEEEEEeeccCC
Confidence 77664 36899999999984 66 59999999999999999999999999999999 8999999998877
Q ss_pred Cccchh-hhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCeeeEEEcCC-cceEEEEeC
Q 023384 224 EEEEHE-LTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKITPIFG-MRFLIEIYP 283 (283)
Q Consensus 224 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~-~~~~i~~~~ 283 (283)
...... +.......++.++...++++||.+||+++|+++||+++++.+..+ ..++|+++|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~~v~~~~~~g~~~svi~~~~ 354 (363)
T 3dp7_A 293 QRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLEVEEIQDNIGLGHSILQCRL 354 (363)
T ss_dssp CSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEEESCCCCCBTTTBEEEEEEE
T ss_pred ccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCeEEEEEeCCCCCceEEEEee
Confidence 654321 001112333444555678899999999999999999999987755 489999875
No 14
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=100.00 E-value=4.4e-37 Score=268.96 Aligned_cols=263 Identities=19% Similarity=0.273 Sum_probs=222.7
Q ss_pred CccccccCeeEeeccCCCCceEecchhc-chhhcCCCCChhhhhhhhcCccchhhhhhHHHhhccCCcchhHHhhCCchh
Q 023384 1 MRLLVHSGCFKKTKVNGQEEAYGLTAAS-TLLIKDKPYCLSPTVSVFVDPFFVAPYQSLSSWFKGAELTLWETVHGIKFW 79 (283)
Q Consensus 1 Lr~L~~~g~l~~~~~~~~~~~y~~t~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~ 79 (283)
||+|++.|+|++. ++.|++|+.+ ++|.++++.++.+++.+..++..+..|.+|.++++++. ++|+ + |
T Consensus 60 L~~L~~~g~l~~~-----~~~y~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~-----~-~ 127 (335)
T 2r3s_A 60 CDYLVIIGFMTKQ-----AEGYRLTSDSAMFLDRQSKFYVGDAIEFLLSPMITNGFNDLTAAVLKGG-TAIS-----S-E 127 (335)
T ss_dssp HHHHHHTTSEEEE-----TTEEEECHHHHHHTCTTSTTCCGGGHHHHTCHHHHGGGTTHHHHHHHTS-CCST-----T-T
T ss_pred HHHHHhcCCeEec-----CCEEecCHHHHHHhccCCcHHHHHHHHHhcchhhHHHHHhHHHHHhcCC-CCCC-----C-c
Confidence 6899999999986 5899999999 68888888888898888755456789999999999886 3342 3 8
Q ss_pred hHhhcCccHHHHHHHHhhhhhhhhHHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC
Q 023384 80 EFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPE 159 (283)
Q Consensus 80 ~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~ 159 (283)
+++.++++....|...|..........+++ .+++.+.+..+|||||||+|.++..+++++|+.+++++|++.+++.+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~ 206 (335)
T 2r3s_A 128 GTLSPEHPVWVQFAKAMSPMMANPAQLIAQ-LVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKE 206 (335)
T ss_dssp GGGSTTCTHHHHHHHHSGGGGHHHHHHHHH-HHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHHHhhhHHHHHH-hcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHH
Confidence 888899999999999999888777778888 7772117789999999999999999999999999999999977776654
Q ss_pred -------CCCeEEEEcCCCC-CCCC-ceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhh
Q 023384 160 -------ADNLKYIAGDMFQ-FIPP-ADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHEL 230 (283)
Q Consensus 160 -------~~rv~~~~~d~~~-~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~ 230 (283)
.++++++.+|+++ +++. ||+|++.+++|+|+++++.++|++++++|+| ||+++|+|...++....+
T Consensus 207 ~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~-- 281 (335)
T 2r3s_A 207 NARIQGVASRYHTIAGSAFEVDYGNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAV---EGKVIVFDFIPNSDRITP-- 281 (335)
T ss_dssp HHHHHTCGGGEEEEESCTTTSCCCSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEE---EEEEEEEECCCCTTSSCS--
T ss_pred HHHhcCCCcceEEEecccccCCCCCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCC---CcEEEEEeecCCCCcCCc--
Confidence 3579999999998 6665 9999999999999999999999999999999 899999999887654332
Q ss_pred hhhhhhccccccccc-CCccCCHHHHHHHHHHCCCCeeeEEEcCCcceEEEEe
Q 023384 231 TETKFLFDIVMSVNA-TGKERTESEWAKLFFDACFSHYKITPIFGMRFLIEIY 282 (283)
Q Consensus 231 ~~~~~~~~~~~~~~~-~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~ 282 (283)
.....+++.|+... +++.++.++|.++++++||+.+++.+.++..++|+++
T Consensus 282 -~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~~~~~~~~~~i~~~ 333 (335)
T 2r3s_A 282 -PDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQLHSLPTTQQQVIVA 333 (335)
T ss_dssp -HHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEEECCTTSSSEEEEE
T ss_pred -hHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeEEECCCCceeEEEe
Confidence 12346677777665 7899999999999999999999999888777877774
No 15
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=100.00 E-value=6.5e-37 Score=269.74 Aligned_cols=258 Identities=16% Similarity=0.228 Sum_probs=212.6
Q ss_pred CccccccCeeEeeccCCCCceEecchhcc-hhhcCCCCChhhhhhhhcCccchhhhhhHHHhhccCCcchhHHhhCCchh
Q 023384 1 MRLLVHSGCFKKTKVNGQEEAYGLTAAST-LLIKDKPYCLSPTVSVFVDPFFVAPYQSLSSWFKGAELTLWETVHGIKFW 79 (283)
Q Consensus 1 Lr~L~~~g~l~~~~~~~~~~~y~~t~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~ 79 (283)
||+|+++|+|+++ ++.|++|+.++ +|.+++|.+++.++.+. ...+..|.+|++++++|.+..|+..
T Consensus 77 Lr~L~~~gll~~~-----~~~y~~t~~s~~~l~~~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~g~~~~f~~~------ 143 (352)
T 3mcz_A 77 LHALAALGLLTKE-----GDAFRNTALTERYLTTTSADYIGPIVEHQ--YLQWDNWPRLGEILRSEKPLAFQQE------ 143 (352)
T ss_dssp HHHHHHTTSEEEE-----TTEEEECHHHHHHHSTTCTTCCHHHHHHH--HTTTTTGGGHHHHHTCSSCCTTSHH------
T ss_pred HHHHHHCCCeEec-----CCeeecCHHHHhhccCCChhhHHHHHHHh--HHHHHHHHHHHHHHhCCCCCCcccc------
Confidence 6899999999998 47899999997 77778888888887664 2467899999999999976554322
Q ss_pred hHhhcCccHHHHHHHHhhhhhhhhHHHHHHHhhhhhcCC-CCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCC
Q 023384 80 EFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFEG-LGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLP 158 (283)
Q Consensus 80 ~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~-~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~ 158 (283)
.++.++|+..+.|..+|...... ...+++ .++ +.+ ..+|||||||+|.++..+++++|+++++++|+|++++.++
T Consensus 144 ~~~~~~~~~~~~f~~~m~~~~~~-~~~~l~-~~~--~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~ 219 (352)
T 3mcz_A 144 SRFAHDTRARDAFNDAMVRLSQP-MVDVVS-ELG--VFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAAR 219 (352)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHHH-HHHHHH-TCG--GGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHH
T ss_pred cccccCHHHHHHHHHHHHhhhhh-HHHHHH-hCC--CcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHH
Confidence 23457888899999999873332 236777 777 555 8999999999999999999999999999999988877665
Q ss_pred C-------CCCeEEEEcCCCC-C--CCC-ceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccc
Q 023384 159 E-------ADNLKYIAGDMFQ-F--IPP-ADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEE 227 (283)
Q Consensus 159 ~-------~~rv~~~~~d~~~-~--~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~ 227 (283)
+ .+|++++.+|+++ + .+. ||+|+++++||+|+++++.++|++++++|+| ||+++|+|.+.++....
T Consensus 220 ~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~ 296 (352)
T 3mcz_A 220 KTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKP---GGALLILTMTMNDDRVT 296 (352)
T ss_dssp HHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEE---EEEEEEEEECCCTTSSS
T ss_pred HHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCC---CCEEEEEEeccCCCCCC
Confidence 3 3689999999998 4 564 9999999999999999999999999999999 89999999998876543
Q ss_pred hhhhhhhhhccccccccc-CCccCCHHHHHHHHHHCCCCeeeEEEcCCcceEEEEeC
Q 023384 228 HELTETKFLFDIVMSVNA-TGKERTESEWAKLFFDACFSHYKITPIFGMRFLIEIYP 283 (283)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~-~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 283 (283)
+ .....+++.|+... ++++|+.++|+++|+++||++++.. .+...+++++|
T Consensus 297 ~---~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~--~g~~~l~~a~k 348 (352)
T 3mcz_A 297 P---ALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGERS--IGRYTLLIGQR 348 (352)
T ss_dssp S---HHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEEE--ETTEEEEEEEC
T ss_pred C---chHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeeec--cCceEEEEEec
Confidence 3 22456788877654 7899999999999999999998843 35578888876
No 16
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=100.00 E-value=1.9e-36 Score=267.48 Aligned_cols=253 Identities=20% Similarity=0.342 Sum_probs=213.6
Q ss_pred CccccccCeeEeeccCCCCceEecchhc-chhhcCCC---CChhhhhhhhcCccchhhhhhHHHhhccCCcchhHHhhCC
Q 023384 1 MRLLVHSGCFKKTKVNGQEEAYGLTAAS-TLLIKDKP---YCLSPTVSVFVDPFFVAPYQSLSSWFKGAELTLWETVHGI 76 (283)
Q Consensus 1 Lr~L~~~g~l~~~~~~~~~~~y~~t~~~-~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~ 76 (283)
||+|++.|+|+++ ++.|++|+.+ ++|.++++ .++++++.+.. ...+..|.+|+++++++.+
T Consensus 85 Lr~L~~~gll~~~-----~~~y~~t~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~~~l~~g~~--------- 149 (359)
T 1x19_A 85 LETLRQMRVINLE-----DGKWSLTEFADYMFSPTPKEPNLHQTPVAKAMA-FLADDFYMGLSQAVRGQKN--------- 149 (359)
T ss_dssp HHHHHHTTSEEEE-----TTEEEECHHHHHHSSSSCSBTTBCCHHHHHHHH-HHHHHTGGGHHHHHTTSCC---------
T ss_pred HHHHHhCCCeEee-----CCeEecCHHHHHHhcCCCCCccccHHHHHHHHH-HHHHHHHHHHHHHHhcCCC---------
Confidence 6899999999998 4799999974 58888887 78888887763 4567899999999998863
Q ss_pred chhhHhhcCcc---HHHHHHHHhhhhhh-hhHHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechH
Q 023384 77 KFWEFMNQNPG---INQRFNEAMASDTE-ILTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPH 152 (283)
Q Consensus 77 ~~~~~~~~~~~---~~~~f~~~m~~~~~-~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~ 152 (283)
|+++.++|+ ..+.|...|..... .....+++ .++ +++..+|||||||+|.++..+++++|+.+++++|++.
T Consensus 150 --~~~~~~~p~~~~~~~~f~~~m~~~~~~~~~~~l~~-~~~--~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~ 224 (359)
T 1x19_A 150 --FKGQVPYPPVTREDNLYFEEIHRSNAKFAIQLLLE-EAK--LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPG 224 (359)
T ss_dssp --CCCSSCSSCCSHHHHHHHHHHHHTTCHHHHHHHHH-HCC--CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEECGG
T ss_pred --CcccccCchhhHHHHHHHHHHHHhccchhHHHHHH-hcC--CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEecHH
Confidence 677788898 99999999998887 77788888 777 7788999999999999999999999999999999988
Q ss_pred HHhcCCC-------CCCeEEEEcCCCC-CCCCceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCC
Q 023384 153 VVANLPE-------ADNLKYIAGDMFQ-FIPPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAE 224 (283)
Q Consensus 153 ~~~~a~~-------~~rv~~~~~d~~~-~~p~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~ 224 (283)
+++.+++ .+|++++.+|+++ +++++|+|++.+++|+|+++++.++|++++++|+| ||+++|+|...++.
T Consensus 225 ~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~ 301 (359)
T 1x19_A 225 AIDLVNENAAEKGVADRMRGIAVDIYKESYPEADAVLFCRILYSANEQLSTIMCKKAFDAMRS---GGRLLILDMVIDDP 301 (359)
T ss_dssp GHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCT---TCEEEEEEECCCCT
T ss_pred HHHHHHHHHHhcCCCCCEEEEeCccccCCCCCCCEEEEechhccCCHHHHHHHHHHHHHhcCC---CCEEEEEecccCCC
Confidence 8777653 4579999999998 67778999999999999999999999999999999 89999999988765
Q ss_pred ccchhhhhhhhhcccccccc-cCCcc----CCHHHHHHHHHHCCCCeeeEEEcCCcceEEEEeC
Q 023384 225 EEEHELTETKFLFDIVMSVN-ATGKE----RTESEWAKLFFDACFSHYKITPIFGMRFLIEIYP 283 (283)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~-~~~~~----~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 283 (283)
..+ . ..... .|+.. .++++ ++.++|+++++++||+++++.+.+ ..++|+++|
T Consensus 302 -~~~-~--~~~~~--~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v~~~~~~-~~~vi~a~k 358 (359)
T 1x19_A 302 -ENP-N--FDYLS--HYILGAGMPFSVLGFKEQARYKEILESLGYKDVTMVRKY-DHLLVQAVK 358 (359)
T ss_dssp -TSC-C--HHHHH--HHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEEEEEEET-TEEEEEEEC
T ss_pred -CCc-h--HHHHH--HHHHhcCCCCcccCCCCHHHHHHHHHHCCCceEEEEecC-CceEEEEeC
Confidence 221 1 11222 33333 34677 999999999999999999998887 788999987
No 17
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.90 E-value=2.9e-22 Score=168.74 Aligned_cols=164 Identities=13% Similarity=0.111 Sum_probs=124.4
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHC--CCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC-CCCCceEEEecc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAF--PGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ-FIPPADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~-~~p~~D~v~~~~ 184 (283)
.++..+|||||||+|..+..+++++ |+++++++|+ +.+++.|++ ..+|+++++|+.+ +++++|+|++..
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~ 147 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNF 147 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEES
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeee
Confidence 5677899999999999999999986 6789999999 888877654 4689999999998 788899999999
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhccccc---ccc-----------cCCccC
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVM---SVN-----------ATGKER 250 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------~~~~~~ 250 (283)
+||++++++...+|++++++||| ||++++.|...++........ ...+.++.. ... .--..+
T Consensus 148 ~l~~~~~~~~~~~l~~i~~~Lkp---GG~lii~e~~~~~~~~~~~~~-~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~ 223 (261)
T 4gek_A 148 TLQFLEPSERQALLDKIYQGLNP---GGALVLSEKFSFEDAKVGELL-FNMHHDFKRANGYSELEISQKRSMLENVMLTD 223 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEE---EEEEEEEEEBCCSSHHHHHHH-HHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCB
T ss_pred eeeecCchhHhHHHHHHHHHcCC---CcEEEEEeccCCCCHHHHHHH-HHHHHHHHHHcCCCHHHHHHHHhhhcccccCC
Confidence 99999999888999999999999 899999998876654321000 000111100 000 001345
Q ss_pred CHHHHHHHHHHCCCCeeeEEEcCCcceEEEEeC
Q 023384 251 TESEWAKLFFDACFSHYKITPIFGMRFLIEIYP 283 (283)
Q Consensus 251 t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 283 (283)
|.+++.++|++|||+.++++.-....+.++|+|
T Consensus 224 s~~~~~~~L~~AGF~~ve~~fq~~nF~~~iA~K 256 (261)
T 4gek_A 224 SVETHKARLHKAGFEHSELWFQCFNFGSLVALK 256 (261)
T ss_dssp CHHHHHHHHHHHTCSEEEEEEEETTEEEEEEEC
T ss_pred CHHHHHHHHHHcCCCeEEEEEEeccEEEEEEEE
Confidence 889999999999999998864433344456765
No 18
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.86 E-value=2.3e-20 Score=154.55 Aligned_cols=163 Identities=18% Similarity=0.211 Sum_probs=124.8
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEEcCCCC-CCC-CceEEEecccccCC
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----ADNLKYIAGDMFQ-FIP-PADAFLFKLVFHGL 189 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~rv~~~~~d~~~-~~p-~~D~v~~~~vlh~~ 189 (283)
....+|||||||+|.++..+++.+|..+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|++..++|++
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 122 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYDMVVSALSIHHL 122 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEEEEEEESCGGGS
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCceEEEEeCccccC
Confidence 4568999999999999999999999999999999 777766654 3489999999998 554 59999999999999
Q ss_pred ChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhc------cccc------cc-ccCCccCCHHHHH
Q 023384 190 GDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLF------DIVM------SV-NATGKERTESEWA 256 (283)
Q Consensus 190 ~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~------~~~~------~~-~~~~~~~t~~e~~ 256 (283)
++++...+|++++++|+| ||.+++.+...++......... ..+. .+.. +. ......++.+++.
T Consensus 123 ~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (234)
T 3dtn_A 123 EDEDKKELYKRSYSILKE---SGIFINADLVHGETAFIENLNK-TIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQL 198 (234)
T ss_dssp CHHHHHHHHHHHHHHEEE---EEEEEEEEECBCSSHHHHHHHH-HHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHH
T ss_pred CHHHHHHHHHHHHHhcCC---CcEEEEEEecCCCChhhhhHHH-HHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHH
Confidence 998888899999999999 8999999987765532210000 0000 0000 00 0124556899999
Q ss_pred HHHHHCCCCeeeEEEcCCcceEEEEeC
Q 023384 257 KLFFDACFSHYKITPIFGMRFLIEIYP 283 (283)
Q Consensus 257 ~ll~~aGf~~~~~~~~~~~~~~i~~~~ 283 (283)
++|++|||+.+++.......+++..+|
T Consensus 199 ~ll~~aGF~~v~~~~~~~~~~~~~~~~ 225 (234)
T 3dtn_A 199 NWLKEAGFRDVSCIYKYYQFAVMFGRK 225 (234)
T ss_dssp HHHHHTTCEEEEEEEEETTEEEEEEEC
T ss_pred HHHHHcCCCceeeeeeecceeEEEEEe
Confidence 999999999999887766666665543
No 19
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.82 E-value=4.2e-19 Score=145.36 Aligned_cols=155 Identities=19% Similarity=0.211 Sum_probs=124.2
Q ss_pred HHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC-CCC
Q 023384 105 SFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAF-PGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ-FIP 175 (283)
Q Consensus 105 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~~p 175 (283)
..+++ .++ .....+|||||||+|.++..+++.. |..+++++|+ +.+++.+++ ..+++++.+|+.+ +++
T Consensus 27 ~~~~~-~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~ 103 (219)
T 3dh0_A 27 EKVLK-EFG--LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLP 103 (219)
T ss_dssp HHHHH-HHT--CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSC
T ss_pred HHHHH-HhC--CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCC
Confidence 34455 554 6677899999999999999999997 8889999999 888777664 2589999999988 655
Q ss_pred --CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHH
Q 023384 176 --PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTES 253 (283)
Q Consensus 176 --~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 253 (283)
.||+|++..++|++++. ..+|++++++|+| ||.+++.+.........+ .....++.+
T Consensus 104 ~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~----------------~~~~~~~~~ 162 (219)
T 3dh0_A 104 DNTVDFIFMAFTFHELSEP--LKFLEELKRVAKP---FAYLAIIDWKKEERDKGP----------------PPEEVYSEW 162 (219)
T ss_dssp SSCEEEEEEESCGGGCSSH--HHHHHHHHHHEEE---EEEEEEEEECSSCCSSSC----------------CGGGSCCHH
T ss_pred CCCeeEEEeehhhhhcCCH--HHHHHHHHHHhCC---CeEEEEEEecccccccCC----------------chhcccCHH
Confidence 39999999999999875 4889999999999 799999886655442221 012345899
Q ss_pred HHHHHHHHCCCCeeeEEEcCCcceEEEEeC
Q 023384 254 EWAKLFFDACFSHYKITPIFGMRFLIEIYP 283 (283)
Q Consensus 254 e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 283 (283)
++.++++++||+++++.........+.++|
T Consensus 163 ~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k 192 (219)
T 3dh0_A 163 EVGLILEDAGIRVGRVVEVGKYCFGVYAMI 192 (219)
T ss_dssp HHHHHHHHTTCEEEEEEEETTTEEEEEEEC
T ss_pred HHHHHHHHCCCEEEEEEeeCCceEEEEEEe
Confidence 999999999999999988877666676664
No 20
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.81 E-value=5.6e-19 Score=148.78 Aligned_cols=163 Identities=17% Similarity=0.099 Sum_probs=118.0
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEcCCCC-CCC-CceEEEecc-cccCCC
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAGDMFQ-FIP-PADAFLFKL-VFHGLG 190 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~-~~p-~~D~v~~~~-vlh~~~ 190 (283)
.+...+|||||||+|.++..+++.. .+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|++.. +||+++
T Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~ 125 (263)
T 3pfg_A 48 SPKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAVTCMFSSIGHLA 125 (263)
T ss_dssp CTTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEEEECTTGGGGSC
T ss_pred CCCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEEEEcCchhhhcC
Confidence 4566899999999999999999884 48999999 888887765 5589999999998 555 499999998 999996
Q ss_pred h-hHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchh------------h--------hhhhhhccccccccc-C--
Q 023384 191 D-EDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHE------------L--------TETKFLFDIVMSVNA-T-- 246 (283)
Q Consensus 191 d-~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~------------~--------~~~~~~~~~~~~~~~-~-- 246 (283)
+ ++..++|++++++|+| ||.+++.+...++...... . .......++.++... +
T Consensus 126 ~~~~~~~~l~~~~~~L~p---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (263)
T 3pfg_A 126 GQAELDAALERFAAHVLP---DGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRG 202 (263)
T ss_dssp HHHHHHHHHHHHHHTEEE---EEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTE
T ss_pred CHHHHHHHHHHHHHhcCC---CcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCc
Confidence 5 5677999999999999 6887775443332210000 0 000001111211111 1
Q ss_pred ---------CccCCHHHHHHHHHHCCCCeeeEEEcCCcceEEEEeC
Q 023384 247 ---------GKERTESEWAKLFFDACFSHYKITPIFGMRFLIEIYP 283 (283)
Q Consensus 247 ---------~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 283 (283)
.+.++.++|.++|+++||+++++........+++++|
T Consensus 203 ~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~K 248 (263)
T 3pfg_A 203 ITHHEESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGLP 248 (263)
T ss_dssp EEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred EEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEec
Confidence 2346899999999999999998877666677777765
No 21
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.80 E-value=2.3e-19 Score=147.57 Aligned_cols=161 Identities=14% Similarity=0.179 Sum_probs=116.5
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCC-CCC--CceEEEecccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQ-FIP--PADAFLFKLVF 186 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~-~~p--~~D~v~~~~vl 186 (283)
+....+|||||||+|.++..+++..+ +++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++..++
T Consensus 36 ~~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~ 113 (227)
T 1ve3_A 36 MKKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSI 113 (227)
T ss_dssp CCSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCG
T ss_pred cCCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCch
Confidence 34468999999999999999999877 8999999 888877664 3789999999988 655 49999999998
Q ss_pred cCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccch--h-hhhhhhhcccccccccC-----------------
Q 023384 187 HGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEH--E-LTETKFLFDIVMSVNAT----------------- 246 (283)
Q Consensus 187 h~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~----------------- 246 (283)
|.+..++..++|++++++|+| ||.+++.+...+...... . ......+... ++....
T Consensus 114 ~~~~~~~~~~~l~~~~~~L~~---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 189 (227)
T 1ve3_A 114 VHFEPLELNQVFKEVRRVLKP---SGKFIMYFTDLRELLPRLKESLVVGQKYWISK-VIPDQEERTVVIEFKSEQDSFRV 189 (227)
T ss_dssp GGCCHHHHHHHHHHHHHHEEE---EEEEEEEEECHHHHGGGCCC---------CCE-EEEETTTTEEEEEC-----CCEE
T ss_pred HhCCHHHHHHHHHHHHHHcCC---CcEEEEEecChHHHHHHHHhhhhcccceeecc-cccCccccEEEEEeccchhhhee
Confidence 877877788999999999999 799988876532211000 0 0000000000 000000
Q ss_pred -CccCCHHHHHHHHHHCCCCeeeEEEcCCcceEEEEeC
Q 023384 247 -GKERTESEWAKLFFDACFSHYKITPIFGMRFLIEIYP 283 (283)
Q Consensus 247 -~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 283 (283)
...++ .++.++|+++||+.+++........+|+.+|
T Consensus 190 ~~~~w~-~~~~~~l~~~GF~~v~~~~~~~~~~~i~~~~ 226 (227)
T 1ve3_A 190 RFNVWG-KTGVELLAKLYFTKEAEEKVGNYSYLTVYNP 226 (227)
T ss_dssp EEECCC-HHHHHHHHTTTEEEEEEEEETTTEEEEEEEE
T ss_pred ehhhhc-hHHHHHHHHHhhhHHHHHHhCCceeEEeeCC
Confidence 11122 4899999999999999999877778888875
No 22
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.80 E-value=4.8e-19 Score=145.09 Aligned_cols=162 Identities=16% Similarity=0.229 Sum_probs=118.9
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--CCCeEEEEcCCCC-CCC-CceEEEecccccCCC
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE--ADNLKYIAGDMFQ-FIP-PADAFLFKLVFHGLG 190 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~~rv~~~~~d~~~-~~p-~~D~v~~~~vlh~~~ 190 (283)
.....+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|++..++|+++
T Consensus 43 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~ 120 (220)
T 3hnr_A 43 NKSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVPTSIDTIVSTYAFHHLT 120 (220)
T ss_dssp HTCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCCSCCSEEEEESCGGGSC
T ss_pred ccCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCCCCeEEEEECcchhcCC
Confidence 446689999999999999999987 679999999 777777665 2489999999998 554 599999999999999
Q ss_pred hhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccc--cCCccCCHHHHHHHHHHCCCCeee
Q 023384 191 DEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVN--ATGKERTESEWAKLFFDACFSHYK 268 (283)
Q Consensus 191 d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~t~~e~~~ll~~aGf~~~~ 268 (283)
+++...+|++++++|+| ||.+++.+...+................+..... ......+.+++.++|+++||+++.
T Consensus 121 ~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~ 197 (220)
T 3hnr_A 121 DDEKNVAIAKYSQLLNK---GGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTF 197 (220)
T ss_dssp HHHHHHHHHHHHHHSCT---TCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEE
T ss_pred hHHHHHHHHHHHHhcCC---CCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEE
Confidence 99877799999999999 7999999876654322110000000000000000 112344899999999999998665
Q ss_pred EEEcCCcceEEEEeC
Q 023384 269 ITPIFGMRFLIEIYP 283 (283)
Q Consensus 269 ~~~~~~~~~~i~~~~ 283 (283)
+. ......++++.|
T Consensus 198 ~~-~~~~~w~~~~~~ 211 (220)
T 3hnr_A 198 TR-LNHFVWVMEATK 211 (220)
T ss_dssp EE-CSSSEEEEEEEE
T ss_pred ee-ccceEEEEeehh
Confidence 54 456777877754
No 23
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.80 E-value=2.2e-19 Score=146.65 Aligned_cols=153 Identities=18% Similarity=0.168 Sum_probs=112.4
Q ss_pred eEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC-CCC--CceEEEecccccCC
Q 023384 121 SLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ-FIP--PADAFLFKLVFHGL 189 (283)
Q Consensus 121 ~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~-~~p--~~D~v~~~~vlh~~ 189 (283)
+|||||||+|.++..+++. |+.+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++..++|++
T Consensus 46 ~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 124 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFW 124 (219)
T ss_dssp EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGGC
T ss_pred EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhhc
Confidence 9999999999999999999 8899999999 777776654 3589999999998 665 49999999999999
Q ss_pred ChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhh--hhhcccccccccCCccCCHHHHHHHHHHCCCCee
Q 023384 190 GDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTET--KFLFDIVMSVNATGKERTESEWAKLFFDACFSHY 267 (283)
Q Consensus 190 ~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 267 (283)
++.. .+|++++++|+| ||.+++.+...+...... .... .....+..........++.++|.++|+++||+.+
T Consensus 125 ~~~~--~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v 198 (219)
T 3dlc_A 125 EDVA--TAFREIYRILKS---GGKTYIGGGFGNKELRDS-ISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSY 198 (219)
T ss_dssp SCHH--HHHHHHHHHEEE---EEEEEEEECCSSHHHHHH-HHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSE
T ss_pred cCHH--HHHHHHHHhCCC---CCEEEEEeccCcHHHHHH-HHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeE
Confidence 7654 789999999999 799888875543321110 0000 0000001000012334578999999999999999
Q ss_pred eEEEcCCcceEEE
Q 023384 268 KITPIFGMRFLIE 280 (283)
Q Consensus 268 ~~~~~~~~~~~i~ 280 (283)
++........++.
T Consensus 199 ~~~~~~~~~~~~~ 211 (219)
T 3dlc_A 199 EIILGDEGFWIII 211 (219)
T ss_dssp EEEEETTEEEEEE
T ss_pred EEEecCCceEEEE
Confidence 9987765555444
No 24
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.79 E-value=5.1e-18 Score=138.53 Aligned_cols=152 Identities=18% Similarity=0.253 Sum_probs=110.0
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--CCCeEEEEcCCCCCCC--CceEEEecccccCCC
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE--ADNLKYIAGDMFQFIP--PADAFLFKLVFHGLG 190 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~~rv~~~~~d~~~~~p--~~D~v~~~~vlh~~~ 190 (283)
.....+|||||||+|.++..+++. ..+++++|+ +.+++.+++ ..+++++.+|+.+..+ .||+|++..++|+++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~~~ 121 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDAVFFAHWLAHVP 121 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEEEEEESCGGGSC
T ss_pred CCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeEEEEechhhcCC
Confidence 455679999999999999999998 679999999 888877765 3789999999988433 499999999999999
Q ss_pred hhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccC------CccCCHHHHHHHHHHCCC
Q 023384 191 DEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNAT------GKERTESEWAKLFFDACF 264 (283)
Q Consensus 191 d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~t~~e~~~ll~~aGf 264 (283)
+++...+|++++++|+| ||.+++.+...+...... .........+......+ ....+.+++.++++++||
T Consensus 122 ~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 197 (218)
T 3ou2_A 122 DDRFEAFWESVRSAVAP---GGVVEFVDVTDHERRLEQ-QDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGW 197 (218)
T ss_dssp HHHHHHHHHHHHHHEEE---EEEEEEEEECCCC-------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHHHHHcCC---CeEEEEEeCCCCccccch-hhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCC
Confidence 98888999999999999 799999887664322110 00000000000000011 224599999999999999
Q ss_pred CeeeEEEcCC
Q 023384 265 SHYKITPIFG 274 (283)
Q Consensus 265 ~~~~~~~~~~ 274 (283)
++. ......
T Consensus 198 ~v~-~~~~~~ 206 (218)
T 3ou2_A 198 SCS-VDEVHP 206 (218)
T ss_dssp EEE-EEEEET
T ss_pred EEE-eeeccc
Confidence 954 444433
No 25
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.79 E-value=2.9e-18 Score=142.02 Aligned_cols=163 Identities=15% Similarity=0.080 Sum_probs=117.2
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEcCCCC-CCC-CceEEEe-cccccCCC
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAGDMFQ-FIP-PADAFLF-KLVFHGLG 190 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~-~~p-~~D~v~~-~~vlh~~~ 190 (283)
.....+|||||||+|.++..+++.++ +++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|++ ..++|++.
T Consensus 38 ~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~~ 115 (239)
T 3bxo_A 38 TPEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAVVSMFSSVGYLK 115 (239)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEEEECTTGGGGCC
T ss_pred cCCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEEEEcCchHhhcC
Confidence 35668999999999999999999976 8999999 888877765 5679999999988 554 4999995 55999885
Q ss_pred h-hHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhh------------h--------hhhhhccccccccc-CC-
Q 023384 191 D-EDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHEL------------T--------ETKFLFDIVMSVNA-TG- 247 (283)
Q Consensus 191 d-~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~------------~--------~~~~~~~~~~~~~~-~~- 247 (283)
+ ++..++|++++++|+| ||.+++.+...++....... . .......+.++... ++
T Consensus 116 ~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (239)
T 3bxo_A 116 TTEELGAAVASFAEHLEP---GGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNATRMEVHFTVADPGKG 192 (239)
T ss_dssp SHHHHHHHHHHHHHTEEE---EEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTE
T ss_pred CHHHHHHHHHHHHHhcCC---CeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEEEEEEEEEEecCCCc
Confidence 4 6778999999999999 78887766554433211000 0 00001111111111 11
Q ss_pred ----------ccCCHHHHHHHHHHCCCCeeeEEEcCCcceEEEEeC
Q 023384 248 ----------KERTESEWAKLFFDACFSHYKITPIFGMRFLIEIYP 283 (283)
Q Consensus 248 ----------~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 283 (283)
+.+|.++|+++|+++||++..+....+...+++|+|
T Consensus 193 ~~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~~~~~~~~va~K 238 (239)
T 3bxo_A 193 VRHFSDVHLITLFHQAEYEAAFTAAGLRVEYLEGGPSGRGLFVGVP 238 (239)
T ss_dssp EEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred ceEEEEEEEeeecCHHHHHHHHHHCCCEEEEeEcCCCCceEEEEec
Confidence 346999999999999997776655556678888876
No 26
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.78 E-value=4.5e-18 Score=143.90 Aligned_cols=155 Identities=17% Similarity=0.136 Sum_probs=118.2
Q ss_pred HHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC-CCC
Q 023384 105 SFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ-FIP 175 (283)
Q Consensus 105 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~-~~p 175 (283)
..+++ .++ .....+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++ .++++++.+|+.+ +++
T Consensus 51 ~~l~~-~~~--~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 126 (273)
T 3bus_A 51 DEMIA-LLD--VRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFE 126 (273)
T ss_dssp HHHHH-HSC--CCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC
T ss_pred HHHHH-hcC--CCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCC
Confidence 44555 554 5677899999999999999999987 689999999 777766653 3589999999998 665
Q ss_pred --CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHH
Q 023384 176 --PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTES 253 (283)
Q Consensus 176 --~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 253 (283)
.||+|++..++|++++. ..+|++++++|+| ||++++.+.......... . ....+........+..++.+
T Consensus 127 ~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~p---gG~l~i~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~ 197 (273)
T 3bus_A 127 DASFDAVWALESLHHMPDR--GRALREMARVLRP---GGTVAIADFVLLAPVEGA-K---KEAVDAFRAGGGVLSLGGID 197 (273)
T ss_dssp TTCEEEEEEESCTTTSSCH--HHHHHHHHTTEEE---EEEEEEEEEEESSCCCHH-H---HHHHHHHHHHHTCCCCCCHH
T ss_pred CCCccEEEEechhhhCCCH--HHHHHHHHHHcCC---CeEEEEEEeeccCCCChh-H---HHHHHHHHhhcCccCCCCHH
Confidence 49999999999999876 4889999999999 899999998765432221 0 00111100111245678999
Q ss_pred HHHHHHHHCCCCeeeEEEc
Q 023384 254 EWAKLFFDACFSHYKITPI 272 (283)
Q Consensus 254 e~~~ll~~aGf~~~~~~~~ 272 (283)
++.++++++||+++++...
T Consensus 198 ~~~~~l~~aGf~~~~~~~~ 216 (273)
T 3bus_A 198 EYESDVRQAELVVTSTVDI 216 (273)
T ss_dssp HHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHcCCeEEEEEEC
Confidence 9999999999999887665
No 27
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.78 E-value=2.3e-18 Score=144.84 Aligned_cols=146 Identities=18% Similarity=0.254 Sum_probs=116.0
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEEcCCCC-CCC--CceEEEeccccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----ADNLKYIAGDMFQ-FIP--PADAFLFKLVFH 187 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~rv~~~~~d~~~-~~p--~~D~v~~~~vlh 187 (283)
.....+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++..++|
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 131 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDAIL 131 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESCGG
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHHHH
Confidence 5667899999999999999999987 789999999 777776654 2689999999998 665 499999999999
Q ss_pred CCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCee
Q 023384 188 GLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHY 267 (283)
Q Consensus 188 ~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 267 (283)
++++++...+|++++++|+| ||.+++.+...+...... . .+.. .....+...++.+++.++++++||+++
T Consensus 132 ~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~---~--~~~~--~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 201 (266)
T 3ujc_A 132 ALSLENKNKLFQKCYKWLKP---TGTLLITDYCATEKENWD---D--EFKE--YVKQRKYTLITVEEYADILTACNFKNV 201 (266)
T ss_dssp GSCHHHHHHHHHHHHHHEEE---EEEEEEEEEEESCGGGCC---H--HHHH--HHHHHTCCCCCHHHHHHHHHHTTCEEE
T ss_pred hcChHHHHHHHHHHHHHcCC---CCEEEEEEeccCCcccch---H--HHHH--HHhcCCCCCCCHHHHHHHHHHcCCeEE
Confidence 99888888999999999999 899999998776522111 0 0000 000123446789999999999999999
Q ss_pred eEEEc
Q 023384 268 KITPI 272 (283)
Q Consensus 268 ~~~~~ 272 (283)
++...
T Consensus 202 ~~~~~ 206 (266)
T 3ujc_A 202 VSKDL 206 (266)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 87764
No 28
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.78 E-value=2.4e-18 Score=144.71 Aligned_cols=153 Identities=13% Similarity=0.280 Sum_probs=115.6
Q ss_pred HHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC-CCC
Q 023384 104 TSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ-FIP 175 (283)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~~p 175 (283)
...+++ .++ .....+|||||||+|.++..+++..+ +++++|+ +.+++.+++ ..+++++.+|+.+ +++
T Consensus 26 ~~~l~~-~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~ 100 (260)
T 1vl5_A 26 LAKLMQ-IAA--LKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFT 100 (260)
T ss_dssp HHHHHH-HHT--CCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSC
T ss_pred HHHHHH-HhC--CCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCC
Confidence 344555 554 56778999999999999999999875 8999999 888777654 2579999999988 765
Q ss_pred --CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhccc-ccccc-cCCccCC
Q 023384 176 --PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDI-VMSVN-ATGKERT 251 (283)
Q Consensus 176 --~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~t 251 (283)
.||+|++..++|+++|.. .+|++++++|+| ||.+++.+...++..... .+... ..+.. .....++
T Consensus 101 ~~~fD~V~~~~~l~~~~d~~--~~l~~~~r~Lkp---gG~l~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 169 (260)
T 1vl5_A 101 DERFHIVTCRIAAHHFPNPA--SFVSEAYRVLKK---GGQLLLVDNSAPENDAFD------VFYNYVEKERDYSHHRAWK 169 (260)
T ss_dssp TTCEEEEEEESCGGGCSCHH--HHHHHHHHHEEE---EEEEEEEEEEBCSSHHHH------HHHHHHHHHHCTTCCCCCB
T ss_pred CCCEEEEEEhhhhHhcCCHH--HHHHHHHHHcCC---CCEEEEEEcCCCCCHHHH------HHHHHHHHhcCccccCCCC
Confidence 499999999999998865 889999999999 899999888766542211 01111 11111 1235678
Q ss_pred HHHHHHHHHHCCCCeeeEEEc
Q 023384 252 ESEWAKLFFDACFSHYKITPI 272 (283)
Q Consensus 252 ~~e~~~ll~~aGf~~~~~~~~ 272 (283)
.++|.++|+++||+++++...
T Consensus 170 ~~~~~~~l~~aGf~~~~~~~~ 190 (260)
T 1vl5_A 170 KSDWLKMLEEAGFELEELHCF 190 (260)
T ss_dssp HHHHHHHHHHHTCEEEEEEEE
T ss_pred HHHHHHHHHHCCCeEEEEEEe
Confidence 999999999999998876543
No 29
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.77 E-value=1.9e-18 Score=144.58 Aligned_cols=141 Identities=17% Similarity=0.219 Sum_probs=112.1
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEEcCCCC-CCC--CceEEEeccccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----ADNLKYIAGDMFQ-FIP--PADAFLFKLVFH 187 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~rv~~~~~d~~~-~~p--~~D~v~~~~vlh 187 (283)
.....+|||||||+|.++..+++.. ..+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++..++|
T Consensus 91 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 169 (254)
T 1xtp_A 91 GHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAI 169 (254)
T ss_dssp TCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGG
T ss_pred ccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhh
Confidence 4567899999999999999999886 567999999 777776654 2679999999987 655 499999999999
Q ss_pred CCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCee
Q 023384 188 GLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHY 267 (283)
Q Consensus 188 ~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 267 (283)
++++++...+|++++++|+| ||.+++.+......... .+ .......++.++|.++|+++||+++
T Consensus 170 ~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~---------~~----~~~~~~~~~~~~~~~~l~~aGf~~~ 233 (254)
T 1xtp_A 170 YLTDADFVKFFKHCQQALTP---NGYIFFKENCSTGDRFL---------VD----KEDSSLTRSDIHYKRLFNESGVRVV 233 (254)
T ss_dssp GSCHHHHHHHHHHHHHHEEE---EEEEEEEEEBC--CCEE---------EE----TTTTEEEBCHHHHHHHHHHHTCCEE
T ss_pred hCCHHHHHHHHHHHHHhcCC---CeEEEEEecCCCcccce---------ec----ccCCcccCCHHHHHHHHHHCCCEEE
Confidence 99988889999999999999 79999988654332111 00 0012335689999999999999999
Q ss_pred eEEEcC
Q 023384 268 KITPIF 273 (283)
Q Consensus 268 ~~~~~~ 273 (283)
++....
T Consensus 234 ~~~~~~ 239 (254)
T 1xtp_A 234 KEAFQE 239 (254)
T ss_dssp EEEECT
T ss_pred EeeecC
Confidence 887654
No 30
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.77 E-value=8.2e-18 Score=144.14 Aligned_cols=144 Identities=17% Similarity=0.248 Sum_probs=112.8
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC-CCC--CceEEEecc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ-FIP--PADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~-~~p--~~D~v~~~~ 184 (283)
+....+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++ .++++++.+|+.+ +++ .||+|++..
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 158 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQD 158 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecc
Confidence 5677899999999999999999987 469999999 777776654 3689999999998 765 499999999
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCC
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACF 264 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 264 (283)
++|++++. ..+|++++++||| ||++++.+...++..... ......... ......+.+++.++++++||
T Consensus 159 ~l~~~~~~--~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~l~~aGf 226 (297)
T 2o57_A 159 AFLHSPDK--LKVFQECARVLKP---RGVMAITDPMKEDGIDKS---SIQPILDRI----KLHDMGSLGLYRSLAKECGL 226 (297)
T ss_dssp CGGGCSCH--HHHHHHHHHHEEE---EEEEEEEEEEECTTCCGG---GGHHHHHHH----TCSSCCCHHHHHHHHHHTTE
T ss_pred hhhhcCCH--HHHHHHHHHHcCC---CeEEEEEEeccCCCCchH---HHHHHHHHh----cCCCCCCHHHHHHHHHHCCC
Confidence 99999884 5889999999999 899999998766543221 001111100 11234589999999999999
Q ss_pred CeeeEEEc
Q 023384 265 SHYKITPI 272 (283)
Q Consensus 265 ~~~~~~~~ 272 (283)
+++++...
T Consensus 227 ~~~~~~~~ 234 (297)
T 2o57_A 227 VTLRTFSR 234 (297)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEC
Confidence 99988764
No 31
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.77 E-value=6.9e-18 Score=141.36 Aligned_cols=152 Identities=14% Similarity=0.106 Sum_probs=115.3
Q ss_pred HHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC-CCC
Q 023384 105 SFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ-FIP 175 (283)
Q Consensus 105 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~-~~p 175 (283)
..+++ .+. .....+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++ .++++++.+|+.+ +.+
T Consensus 26 ~~l~~-~~~--~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 101 (256)
T 1nkv_A 26 ATLGR-VLR--MKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVAN 101 (256)
T ss_dssp HHHHH-HTC--CCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCS
T ss_pred HHHHH-hcC--CCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcC
Confidence 34444 444 5677899999999999999999988 679999999 888777654 3589999999988 443
Q ss_pred -CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHH
Q 023384 176 -PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESE 254 (283)
Q Consensus 176 -~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e 254 (283)
.||+|++..++|++++. .++|++++++||| ||++++.+...........+. ..+. .......++.++
T Consensus 102 ~~fD~V~~~~~~~~~~~~--~~~l~~~~r~Lkp---gG~l~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~ 169 (256)
T 1nkv_A 102 EKCDVAACVGATWIAGGF--AGAEELLAQSLKP---GGIMLIGEPYWRQLPATEEIA--QACG-----VSSTSDFLTLPG 169 (256)
T ss_dssp SCEEEEEEESCGGGTSSS--HHHHHHHTTSEEE---EEEEEEEEEEETTCCSSHHHH--HTTT-----CSCGGGSCCHHH
T ss_pred CCCCEEEECCChHhcCCH--HHHHHHHHHHcCC---CeEEEEecCcccCCCChHHHH--HHHh-----cccccccCCHHH
Confidence 49999999999999875 4789999999999 899999987765443221000 0000 011124568999
Q ss_pred HHHHHHHCCCCeeeEEEc
Q 023384 255 WAKLFFDACFSHYKITPI 272 (283)
Q Consensus 255 ~~~ll~~aGf~~~~~~~~ 272 (283)
|.++++++||+++++...
T Consensus 170 ~~~~l~~aGf~~~~~~~~ 187 (256)
T 1nkv_A 170 LVGAFDDLGYDVVEMVLA 187 (256)
T ss_dssp HHHHHHTTTBCCCEEEEC
T ss_pred HHHHHHHCCCeeEEEEeC
Confidence 999999999999887543
No 32
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.76 E-value=3e-18 Score=147.54 Aligned_cols=164 Identities=11% Similarity=0.021 Sum_probs=117.9
Q ss_pred cCCCCeEEEEcCCccHHHHHHH-HHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC-CCC-CceEEEecc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIIS-EAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ-FIP-PADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~-~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~-~~p-~~D~v~~~~ 184 (283)
+....+|||||||+|.++..++ ...|+.+++++|+ +.+++.+++ .++++++.+|+.+ +++ .||+|++..
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~ 195 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNG 195 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCS
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECC
Confidence 5677899999999999999986 6789999999999 877776654 3469999999998 555 499999999
Q ss_pred cccCCChhH-HHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhh--h------h--hccccccccc-CCccCCH
Q 023384 185 VFHGLGDED-GLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTET--K------F--LFDIVMSVNA-TGKERTE 252 (283)
Q Consensus 185 vlh~~~d~~-~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~--~------~--~~~~~~~~~~-~~~~~t~ 252 (283)
++|++++.+ ...+|++++++|+| ||.+++.+...+...... .... . . ...+...... ....++.
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKP---GGALVTSFLTPPPALSPD-SPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTH 271 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEE---EEEEEEECCCCCTTTCTT-CCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCH
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCC---CeEEEEEecCCCCccccc-ccceeeccccchhhhhhhHHHHHHhhhhhccCCH
Confidence 999996654 45789999999999 788888776544322110 0000 0 0 0000000000 1134799
Q ss_pred HHHHHHHHHCCCCeeeEEEcC-CcceEEEEeC
Q 023384 253 SEWAKLFFDACFSHYKITPIF-GMRFLIEIYP 283 (283)
Q Consensus 253 ~e~~~ll~~aGf~~~~~~~~~-~~~~~i~~~~ 283 (283)
+++.++|+++||+++++.... .....++++|
T Consensus 272 ~~~~~~l~~aGF~~v~~~~~~~~~~~~v~a~K 303 (305)
T 3ocj_A 272 AQTRAQLEEAGFTDLRFEDDRARLFPTVIARK 303 (305)
T ss_dssp HHHHHHHHHTTCEEEEEECCTTSSSCEEEEEC
T ss_pred HHHHHHHHHCCCEEEEEEcccCceeeEEEEec
Confidence 999999999999999988653 3445666665
No 33
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.76 E-value=4.7e-18 Score=137.50 Aligned_cols=145 Identities=16% Similarity=0.107 Sum_probs=114.9
Q ss_pred CCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEcCCCC-CCC--CceEEEecccccCCChhH
Q 023384 119 LGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAGDMFQ-FIP--PADAFLFKLVFHGLGDED 193 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~-~~p--~~D~v~~~~vlh~~~d~~ 193 (283)
..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++..++|++++++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~ 119 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGE 119 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTT
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHH
Confidence 589999999999999999988 568999999 888877765 6689999999988 654 499999999999999777
Q ss_pred HHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCeeeEEEcC
Q 023384 194 GLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKITPIF 273 (283)
Q Consensus 194 ~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~ 273 (283)
...+|++++++|+| ||.+++.+...+..... .. .......++.+++.++|+++||+++++...+
T Consensus 120 ~~~~l~~~~~~L~p---gG~l~i~~~~~~~~~~~---------~~----~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 183 (203)
T 3h2b_A 120 LPDALVALRMAVED---GGGLLMSFFSGPSLEPM---------YH----PVATAYRWPLPELAQALETAGFQVTSSHWDP 183 (203)
T ss_dssp HHHHHHHHHHTEEE---EEEEEEEEECCSSCEEE---------CC----SSSCEEECCHHHHHHHHHHTTEEEEEEEECT
T ss_pred HHHHHHHHHHHcCC---CcEEEEEEccCCchhhh---------hc----hhhhhccCCHHHHHHHHHHCCCcEEEEEecC
Confidence 88999999999999 78888877544331111 00 0012345689999999999999999988765
Q ss_pred C-cceEEEE
Q 023384 274 G-MRFLIEI 281 (283)
Q Consensus 274 ~-~~~~i~~ 281 (283)
. ++..+..
T Consensus 184 ~~p~~~l~~ 192 (203)
T 3h2b_A 184 RFPHAYLTA 192 (203)
T ss_dssp TSSEEEEEE
T ss_pred CCcchhhhh
Confidence 4 4554443
No 34
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.75 E-value=3.2e-17 Score=136.03 Aligned_cols=143 Identities=17% Similarity=0.189 Sum_probs=109.9
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---CCCeEEEEcCCCC-CCC--CceEEEecccccC
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE---ADNLKYIAGDMFQ-FIP--PADAFLFKLVFHG 188 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---~~rv~~~~~d~~~-~~p--~~D~v~~~~vlh~ 188 (283)
++...+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++.+++|+
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 128 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEW 128 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTS
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhh
Confidence 456789999999999999999998 679999999 777777655 5789999999998 654 4999999999999
Q ss_pred CChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCeee
Q 023384 189 LGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYK 268 (283)
Q Consensus 189 ~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 268 (283)
+++.. .+|++++++|+| ||.+++.+.......... .+... .-.......++.+++.++++++||++++
T Consensus 129 ~~~~~--~~l~~~~~~L~p---gG~l~i~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 196 (242)
T 3l8d_A 129 TEEPL--RALNEIKRVLKS---DGYACIAILGPTAKPREN------SYPRL-YGKDVVCNTMMPWEFEQLVKEQGFKVVD 196 (242)
T ss_dssp SSCHH--HHHHHHHHHEEE---EEEEEEEEECTTCGGGGG------GGGGG-GTCCCSSCCCCHHHHHHHHHHTTEEEEE
T ss_pred ccCHH--HHHHHHHHHhCC---CeEEEEEEcCCcchhhhh------hhhhh-ccccccccCCCHHHHHHHHHHcCCEEEE
Confidence 97764 789999999999 788888775433222111 01111 0011134557899999999999999998
Q ss_pred EEEc
Q 023384 269 ITPI 272 (283)
Q Consensus 269 ~~~~ 272 (283)
+...
T Consensus 197 ~~~~ 200 (242)
T 3l8d_A 197 GIGV 200 (242)
T ss_dssp EEEE
T ss_pred eecc
Confidence 7644
No 35
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.75 E-value=1.3e-17 Score=138.60 Aligned_cols=153 Identities=17% Similarity=0.302 Sum_probs=115.3
Q ss_pred HHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC-CCC-
Q 023384 105 SFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ-FIP- 175 (283)
Q Consensus 105 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~~p- 175 (283)
...++ .++ .....+|||||||+|.++..+++..+ +++++|+ +.+++.+++ ..+++++.+|+.+ +++
T Consensus 11 ~~~~~-~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 85 (239)
T 1xxl_A 11 GLMIK-TAE--CRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPD 85 (239)
T ss_dssp HHHHH-HHT--CCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCT
T ss_pred chHHH-HhC--cCCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCC
Confidence 33444 444 67789999999999999999999875 8999999 777776654 2679999999988 655
Q ss_pred -CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhccccccc-ccCCccCCHH
Q 023384 176 -PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSV-NATGKERTES 253 (283)
Q Consensus 176 -~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~t~~ 253 (283)
.||+|++..++|++++.. .+|++++++|+| ||.+++.+...+...... . ....+..+. ......++.+
T Consensus 86 ~~fD~v~~~~~l~~~~~~~--~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~ 155 (239)
T 1xxl_A 86 DSFDIITCRYAAHHFSDVR--KAVREVARVLKQ---DGRFLLVDHYAPEDPVLD---E--FVNHLNRLRDPSHVRESSLS 155 (239)
T ss_dssp TCEEEEEEESCGGGCSCHH--HHHHHHHHHEEE---EEEEEEEEECBCSSHHHH---H--HHHHHHHHHCTTCCCCCBHH
T ss_pred CcEEEEEECCchhhccCHH--HHHHHHHHHcCC---CcEEEEEEcCCCCChhHH---H--HHHHHHHhccccccCCCCHH
Confidence 499999999999998754 889999999999 799999988766542111 0 000001110 1124567899
Q ss_pred HHHHHHHHCCCCeeeEEEc
Q 023384 254 EWAKLFFDACFSHYKITPI 272 (283)
Q Consensus 254 e~~~ll~~aGf~~~~~~~~ 272 (283)
+|.++|+++||+++++...
T Consensus 156 ~~~~ll~~aGf~~~~~~~~ 174 (239)
T 1xxl_A 156 EWQAMFSANQLAYQDIQKW 174 (239)
T ss_dssp HHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHCCCcEEEEEee
Confidence 9999999999998877553
No 36
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.75 E-value=1.4e-17 Score=141.96 Aligned_cols=160 Identities=13% Similarity=0.157 Sum_probs=118.2
Q ss_pred HHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC-CCC
Q 023384 105 SFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ-FIP 175 (283)
Q Consensus 105 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~-~~p 175 (283)
..+++ .++ .....+|||||||+|.++..+++.++ .+++++|+ +++++.+++ ..+++++.+|+.+ + .
T Consensus 54 ~~~~~-~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~ 128 (287)
T 1kpg_A 54 DLALG-KLG--LQPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD-E 128 (287)
T ss_dssp HHHHT-TTT--CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC-C
T ss_pred HHHHH-HcC--CCCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC-C
Confidence 33445 444 56678999999999999999997775 49999999 777776653 3589999999976 4 5
Q ss_pred CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccch----hhh-hhhhhcccc-cccccCCcc
Q 023384 176 PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEH----ELT-ETKFLFDIV-MSVNATGKE 249 (283)
Q Consensus 176 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~----~~~-~~~~~~~~~-~~~~~~~~~ 249 (283)
.||+|++..++|++++++...+|++++++||| ||++++.+...+...... +.. ......++. .....++..
T Consensus 129 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (287)
T 1kpg_A 129 PVDRIVSIGAFEHFGHERYDAFFSLAHRLLPA---DGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRL 205 (287)
T ss_dssp CCSEEEEESCGGGTCTTTHHHHHHHHHHHSCT---TCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCC
T ss_pred CeeEEEEeCchhhcChHHHHHHHHHHHHhcCC---CCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCC
Confidence 69999999999999877778999999999999 899999988765432200 000 000011110 011134566
Q ss_pred CCHHHHHHHHHHCCCCeeeEEEc
Q 023384 250 RTESEWAKLFFDACFSHYKITPI 272 (283)
Q Consensus 250 ~t~~e~~~ll~~aGf~~~~~~~~ 272 (283)
++.+++.++++++||+++++...
T Consensus 206 ~s~~~~~~~l~~aGf~~~~~~~~ 228 (287)
T 1kpg_A 206 PSIPMVQECASANGFTVTRVQSL 228 (287)
T ss_dssp CCHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCHHHHHHHHHhCCcEEEEEEeC
Confidence 79999999999999999988764
No 37
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.75 E-value=6.1e-18 Score=143.35 Aligned_cols=152 Identities=16% Similarity=0.277 Sum_probs=113.8
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC-CCC--CceEEEeccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ-FIP--PADAFLFKLV 185 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~~p--~~D~v~~~~v 185 (283)
+....+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++..+
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFV 114 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESC
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEech
Confidence 45678999999999999999999999999999999 777776654 3579999999998 554 4999999999
Q ss_pred ccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhh-hhcccc-cccccCCccCCHHHHHHHHHHCC
Q 023384 186 FHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETK-FLFDIV-MSVNATGKERTESEWAKLFFDAC 263 (283)
Q Consensus 186 lh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~t~~e~~~ll~~aG 263 (283)
+|++++.. .+|++++++|+| ||.+++.+.........+...... .+..+. .....++..++..++.++|+++|
T Consensus 115 l~~~~~~~--~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aG 189 (276)
T 3mgg_A 115 LEHLQSPE--EALKSLKKVLKP---GGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESG 189 (276)
T ss_dssp GGGCSCHH--HHHHHHHHHEEE---EEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTT
T ss_pred hhhcCCHH--HHHHHHHHHcCC---CcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCC
Confidence 99999875 889999999999 799999885442221111000000 111111 11123456667889999999999
Q ss_pred CCeeeEEEc
Q 023384 264 FSHYKITPI 272 (283)
Q Consensus 264 f~~~~~~~~ 272 (283)
|+++++...
T Consensus 190 f~~v~~~~~ 198 (276)
T 3mgg_A 190 FEKIRVEPR 198 (276)
T ss_dssp CEEEEEEEE
T ss_pred CCeEEEeeE
Confidence 999887644
No 38
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.75 E-value=2.6e-17 Score=139.48 Aligned_cols=140 Identities=19% Similarity=0.244 Sum_probs=109.2
Q ss_pred CCCeEEEEcCCc---cHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEEcCCCCC------------C--C
Q 023384 118 GLGSLVDVGGGN---GSLSRIISEAFPGIKCTVLDL-PHVVANLPE----ADNLKYIAGDMFQF------------I--P 175 (283)
Q Consensus 118 ~~~~vlDvGgG~---G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~rv~~~~~d~~~~------------~--p 175 (283)
+..+|||||||+ |.++..+++.+|+.+++++|+ |.+++.+++ .++++++.+|+.++ + .
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 457999999999 999888888899999999999 888887764 47899999999862 2 3
Q ss_pred CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHH
Q 023384 176 PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEW 255 (283)
Q Consensus 176 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~ 255 (283)
.+|+|++..+||++++++...+|++++++|+| ||.+++.+...+. ... . ....+...........++.+|+
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~p---GG~l~i~~~~~~~--~~~-~---~~~~~~~~~~~~~~~~~s~~ei 227 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDALAP---GSYLFMTSLVDTG--LPA-Q---QKLARITRENLGEGWARTPEEI 227 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHSCT---TCEEEEEEEBCSS--CHH-H---HHHHHHHHHHHSCCCCBCHHHH
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhCCC---CcEEEEEEecCcc--hHH-H---HHHHHHHHhcCCCCccCCHHHH
Confidence 58999999999999998888999999999999 8999998876532 110 1 1111111111124567899999
Q ss_pred HHHHHHCCCCeee
Q 023384 256 AKLFFDACFSHYK 268 (283)
Q Consensus 256 ~~ll~~aGf~~~~ 268 (283)
.++| +||++++
T Consensus 228 ~~~l--~G~~l~~ 238 (274)
T 2qe6_A 228 ERQF--GDFELVE 238 (274)
T ss_dssp HHTT--TTCEECT
T ss_pred HHHh--CCCeEcc
Confidence 9999 6998775
No 39
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.74 E-value=4.6e-17 Score=140.57 Aligned_cols=162 Identities=12% Similarity=0.081 Sum_probs=118.4
Q ss_pred hhhhhhhhHHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEE
Q 023384 96 MASDTEILTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIA 167 (283)
Q Consensus 96 m~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~ 167 (283)
+..........+++ .++ .+....+|||||||+|.++..+++++ +.+++++|+ +.+++.+++ .++++++.
T Consensus 97 ~~~~~~~~~~~l~~-~l~-~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 173 (312)
T 3vc1_A 97 LHRLESAQAEFLMD-HLG-QAGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRV 173 (312)
T ss_dssp HHHHHHHHHHHHHT-TSC-CCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred hhhHHHHHHHHHHH-Hhc-cCCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEE
Confidence 33333333344454 332 14567899999999999999999986 679999999 888876654 35899999
Q ss_pred cCCCC-CCC--CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccc
Q 023384 168 GDMFQ-FIP--PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVN 244 (283)
Q Consensus 168 ~d~~~-~~p--~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (283)
+|+.+ +++ .||+|++..++|+++ ...+|++++++|+| ||++++.+....+..... . .......-..
T Consensus 174 ~d~~~~~~~~~~fD~V~~~~~l~~~~---~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~-~-~~~~~~~~~~--- 242 (312)
T 3vc1_A 174 CNMLDTPFDKGAVTASWNNESTMYVD---LHDLFSEHSRFLKV---GGRYVTITGCWNPRYGQP-S-KWVSQINAHF--- 242 (312)
T ss_dssp CCTTSCCCCTTCEEEEEEESCGGGSC---HHHHHHHHHHHEEE---EEEEEEEEEEECTTTCSC-C-HHHHHHHHHH---
T ss_pred CChhcCCCCCCCEeEEEECCchhhCC---HHHHHHHHHHHcCC---CcEEEEEEccccccccch-h-HHHHHHHhhh---
Confidence 99998 665 499999999999994 56889999999999 899999987776543111 0 0000111000
Q ss_pred cCCccCCHHHHHHHHHHCCCCeeeEEEc
Q 023384 245 ATGKERTESEWAKLFFDACFSHYKITPI 272 (283)
Q Consensus 245 ~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 272 (283)
....++.++|.++++++||+++++...
T Consensus 243 -~~~~~s~~~~~~~l~~aGf~~~~~~~~ 269 (312)
T 3vc1_A 243 -ECNIHSRREYLRAMADNRLVPHTIVDL 269 (312)
T ss_dssp -TCCCCBHHHHHHHHHTTTEEEEEEEEC
T ss_pred -cCCCCCHHHHHHHHHHCCCEEEEEEeC
Confidence 123668999999999999999988764
No 40
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.74 E-value=1.8e-17 Score=142.22 Aligned_cols=160 Identities=19% Similarity=0.257 Sum_probs=112.7
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----C----CCeEEEEcCCCC-CCC-CceEEEe-cc
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----A----DNLKYIAGDMFQ-FIP-PADAFLF-KL 184 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~----~rv~~~~~d~~~-~~p-~~D~v~~-~~ 184 (283)
...+|||||||+|.++..+++. +.+++++|+ +.+++.+++ . .+++++.+|+.+ +.+ .||+|++ ..
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~ 159 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALDKRFGTVVISSG 159 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCSCCEEEEEECHH
T ss_pred CCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcCCCcCEEEECCc
Confidence 3459999999999999999988 578999999 888877765 1 689999999998 655 4998886 47
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccch-----hhhh-hhh-------------hccccccc--
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEH-----ELTE-TKF-------------LFDIVMSV-- 243 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~-----~~~~-~~~-------------~~~~~~~~-- 243 (283)
++|++++++...+|++++++|+| ||++++.....+.....+ .+.. ... ...+....
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T 3g2m_A 160 SINELDEADRRGLYASVREHLEP---GGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEIQEITIHPAD 236 (299)
T ss_dssp HHTTSCHHHHHHHHHHHHHHEEE---EEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEEEEEEEEESC
T ss_pred ccccCCHHHHHHHHHHHHHHcCC---CcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccEEEEEEEecc
Confidence 88888888889999999999999 788777664433210000 0000 000 00000000
Q ss_pred ---------ccCCccCCHHHHHHHHHHCCCCeeeEEEcCC------cceEEEEe
Q 023384 244 ---------NATGKERTESEWAKLFFDACFSHYKITPIFG------MRFLIEIY 282 (283)
Q Consensus 244 ---------~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~------~~~~i~~~ 282 (283)
....+.++.+++.++|+++||+++++.+... ...++++.
T Consensus 237 ~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~g~~~~~~~lvea~ 290 (299)
T 3g2m_A 237 ETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFASGGAGRKDMVLVEAV 290 (299)
T ss_dssp C--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECTTSSSSCCEEEEEEE
T ss_pred CCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCCCCCCccceeeeehh
Confidence 0012246999999999999999999987742 24577765
No 41
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.74 E-value=8.5e-18 Score=132.10 Aligned_cols=141 Identities=21% Similarity=0.233 Sum_probs=112.6
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEcCCCC-CCCCceEEEecccccCCChh
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAGDMFQ-FIPPADAFLFKLVFHGLGDE 192 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~-~~p~~D~v~~~~vlh~~~d~ 192 (283)
.....+|||||||+|.++..+++... +++++|+ +.+++.+++ ..++++..+| .. +...||+|++..++|++++.
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~v~~~~~d-~~~~~~~~D~v~~~~~l~~~~~~ 91 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEKFDSVITLSDP-KEIPDNSVDFILFANSFHDMDDK 91 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHHCTTSEEESSG-GGSCTTCEEEEEEESCSTTCSCH
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHhCCCcEEEeCC-CCCCCCceEEEEEccchhcccCH
Confidence 56678999999999999999999874 9999999 777777765 6789999999 32 22359999999999999775
Q ss_pred HHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCeeeEEEc
Q 023384 193 DGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKITPI 272 (283)
Q Consensus 193 ~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 272 (283)
..+|++++++|+| ||++++.+.........++ ....++.+++.++++ ||+++++...
T Consensus 92 --~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~l~--Gf~~~~~~~~ 148 (170)
T 3i9f_A 92 --QHVISEVKRILKD---DGRVIIIDWRKENTGIGPP----------------LSIRMDEKDYMGWFS--NFVVEKRFNP 148 (170)
T ss_dssp --HHHHHHHHHHEEE---EEEEEEEEECSSCCSSSSC----------------GGGCCCHHHHHHHTT--TEEEEEEECS
T ss_pred --HHHHHHHHHhcCC---CCEEEEEEcCccccccCch----------------HhhhcCHHHHHHHHh--CcEEEEccCC
Confidence 4889999999999 7999998876554332210 022368999999999 9999999888
Q ss_pred CCcceEEEEe
Q 023384 273 FGMRFLIEIY 282 (283)
Q Consensus 273 ~~~~~~i~~~ 282 (283)
......++++
T Consensus 149 ~~~~~~l~~~ 158 (170)
T 3i9f_A 149 TPYHFGLVLK 158 (170)
T ss_dssp STTEEEEEEE
T ss_pred CCceEEEEEe
Confidence 7666666654
No 42
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.73 E-value=2e-17 Score=136.90 Aligned_cols=131 Identities=16% Similarity=0.165 Sum_probs=107.1
Q ss_pred CeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC-CCC-CceEEEecccccCC
Q 023384 120 GSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ-FIP-PADAFLFKLVFHGL 189 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~-~~p-~~D~v~~~~vlh~~ 189 (283)
.+|||||||+|.++..+++ +..+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|++..++|++
T Consensus 68 ~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 145 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCAI 145 (235)
T ss_dssp EEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTTS
T ss_pred CCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhcC
Confidence 5999999999999998876 5778999999 777776654 2569999999998 433 49999999999999
Q ss_pred ChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCeeeE
Q 023384 190 GDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKI 269 (283)
Q Consensus 190 ~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 269 (283)
++++...+|++++++|+| ||.+++.+.........+ ...++.++|.++|+++||+++++
T Consensus 146 ~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~------------------~~~~~~~~~~~~l~~~Gf~~~~~ 204 (235)
T 3lcc_A 146 EPEMRPAWAKSMYELLKP---DGELITLMYPITDHVGGP------------------PYKVDVSTFEEVLVPIGFKAVSV 204 (235)
T ss_dssp CGGGHHHHHHHHHHHEEE---EEEEEEEECCCSCCCSCS------------------SCCCCHHHHHHHHGGGTEEEEEE
T ss_pred CHHHHHHHHHHHHHHCCC---CcEEEEEEecccccCCCC------------------CccCCHHHHHHHHHHcCCeEEEE
Confidence 988888999999999999 799888776544322211 11258999999999999999988
Q ss_pred EEcC
Q 023384 270 TPIF 273 (283)
Q Consensus 270 ~~~~ 273 (283)
...+
T Consensus 205 ~~~~ 208 (235)
T 3lcc_A 205 EENP 208 (235)
T ss_dssp EECT
T ss_pred EecC
Confidence 7654
No 43
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.73 E-value=5.9e-17 Score=134.54 Aligned_cols=141 Identities=16% Similarity=0.200 Sum_probs=109.4
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCC---CCC--CceEEEecccccCC
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQ---FIP--PADAFLFKLVFHGL 189 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~---~~p--~~D~v~~~~vlh~~ 189 (283)
+++..+|||||||+|.++..+++. +.+++++|+ +.+++.+++. ++++.+|+.+ +++ .||+|++..++|++
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~ 114 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHL 114 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEEEEESCGGGS
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeEEEECCchhhC
Confidence 456789999999999999999998 568999999 8888877643 8999999876 444 49999999999999
Q ss_pred ChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCeeeE
Q 023384 190 GDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKI 269 (283)
Q Consensus 190 ~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 269 (283)
++++...+|++++++||| ||.+++......... . ..... ........++.+++.++++++||+++++
T Consensus 115 ~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~------~---~~~~~-~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 181 (240)
T 3dli_A 115 DPERLFELLSLCYSKMKY---SSYIVIESPNPTSLY------S---LINFY-IDPTHKKPVHPETLKFILEYLGFRDVKI 181 (240)
T ss_dssp CGGGHHHHHHHHHHHBCT---TCCEEEEEECTTSHH------H---HHHHT-TSTTCCSCCCHHHHHHHHHHHTCEEEEE
T ss_pred CcHHHHHHHHHHHHHcCC---CcEEEEEeCCcchhH------H---HHHHh-cCccccccCCHHHHHHHHHHCCCeEEEE
Confidence 998888999999999999 788888665422110 0 01100 1112345678999999999999999887
Q ss_pred EEcC
Q 023384 270 TPIF 273 (283)
Q Consensus 270 ~~~~ 273 (283)
....
T Consensus 182 ~~~~ 185 (240)
T 3dli_A 182 EFFE 185 (240)
T ss_dssp EEEC
T ss_pred EEec
Confidence 6653
No 44
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.73 E-value=1.9e-17 Score=137.59 Aligned_cols=138 Identities=14% Similarity=0.171 Sum_probs=111.1
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC-CCC--CceEEEeccccc
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ-FIP--PADAFLFKLVFH 187 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~~p--~~D~v~~~~vlh 187 (283)
...+|||||||+|.++..+++.. ..+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|++..++|
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 46899999999999999999887 568999999 888777654 2368999999877 544 499999999999
Q ss_pred CCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCee
Q 023384 188 GLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHY 267 (283)
Q Consensus 188 ~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 267 (283)
++++++...+|++++++|+| ||.+++.+...+.... ++ .......++.++|.++++++||+++
T Consensus 158 ~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~----------~~----~~~~~~~~~~~~~~~~l~~aGf~~~ 220 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRP---NGIIVIKDNMAQEGVI----------LD----DVDSSVCRDLDVVRRIICSAGLSLL 220 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEE---EEEEEEEEEEBSSSEE----------EE----TTTTEEEEBHHHHHHHHHHTTCCEE
T ss_pred hCCHHHHHHHHHHHHHhcCC---CeEEEEEEccCCCcce----------ec----ccCCcccCCHHHHHHHHHHcCCeEE
Confidence 99998888999999999999 7999998877654110 00 0012234589999999999999999
Q ss_pred eEEEcC
Q 023384 268 KITPIF 273 (283)
Q Consensus 268 ~~~~~~ 273 (283)
++....
T Consensus 221 ~~~~~~ 226 (241)
T 2ex4_A 221 AEERQE 226 (241)
T ss_dssp EEEECC
T ss_pred EeeecC
Confidence 987654
No 45
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.73 E-value=3.1e-17 Score=137.47 Aligned_cols=143 Identities=16% Similarity=0.182 Sum_probs=110.8
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC-CCC--CceEEEecc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ-FIP--PADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~-~~p--~~D~v~~~~ 184 (283)
+....+|||||||+|.++..+++.+|. +++++|+ +.+++.+++ .++++++.+|+.+ +++ .||+|++..
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 122 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEG 122 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecC
Confidence 456689999999999999999999986 9999999 777776654 4579999999987 655 499999999
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCC
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACF 264 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 264 (283)
++|++ + ...+|++++++|+| ||++++.+............ ...+. .......+.+++.++++++||
T Consensus 123 ~l~~~-~--~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~~~~~~l~~aGf 188 (257)
T 3f4k_A 123 AIYNI-G--FERGMNEWSKYLKK---GGFIAVSEASWFTSERPAEI--EDFWM------DAYPEISVIPTCIDKMERAGY 188 (257)
T ss_dssp CSCCC-C--HHHHHHHHHTTEEE---EEEEEEEEEEESSSCCCHHH--HHHHH------HHCTTCCBHHHHHHHHHHTTE
T ss_pred hHhhc-C--HHHHHHHHHHHcCC---CcEEEEEEeeccCCCChHHH--HHHHH------HhCCCCCCHHHHHHHHHHCCC
Confidence 99999 3 34789999999999 89999998765443322100 00111 011235689999999999999
Q ss_pred CeeeEEEcC
Q 023384 265 SHYKITPIF 273 (283)
Q Consensus 265 ~~~~~~~~~ 273 (283)
+++++...+
T Consensus 189 ~~v~~~~~~ 197 (257)
T 3f4k_A 189 TPTAHFILP 197 (257)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEECC
Confidence 999887654
No 46
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.73 E-value=4e-17 Score=140.24 Aligned_cols=162 Identities=19% Similarity=0.178 Sum_probs=120.1
Q ss_pred HHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCCCCCC
Q 023384 105 SFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQFIPP 176 (283)
Q Consensus 105 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~~~p~ 176 (283)
..+++ .++ ..+..+|||||||+|.++..+++.++ .+++++|+ +++++.+++ .++++++.+|+.+....
T Consensus 62 ~~~~~-~~~--~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 137 (302)
T 3hem_A 62 KLALD-KLN--LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEP 137 (302)
T ss_dssp HHHHH-TTC--CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCC
T ss_pred HHHHH-HcC--CCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcCCC
Confidence 34455 444 56778999999999999999999987 89999999 888777664 34899999999765235
Q ss_pred ceEEEecccccCCCh-------hHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhh-----hhhhccccc-cc
Q 023384 177 ADAFLFKLVFHGLGD-------EDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTE-----TKFLFDIVM-SV 243 (283)
Q Consensus 177 ~D~v~~~~vlh~~~d-------~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~-----~~~~~~~~~-~~ 243 (283)
||+|++..++|++++ +....+|++++++|+| ||++++.+...++......... ...+.++.. ..
T Consensus 138 fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (302)
T 3hem_A 138 VDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPD---DGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEI 214 (302)
T ss_dssp CSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCT---TCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHT
T ss_pred ccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCC---CcEEEEEEEeccCccchhhccccccccccchHHHHHHhc
Confidence 999999999999954 5677999999999999 8999998887764422110000 000001111 11
Q ss_pred ccCCccCCHHHHHHHHHHCCCCeeeEEEcC
Q 023384 244 NATGKERTESEWAKLFFDACFSHYKITPIF 273 (283)
Q Consensus 244 ~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~ 273 (283)
..++...+.+++.++++++||+++++....
T Consensus 215 ~p~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 244 (302)
T 3hem_A 215 FPGGRLPRISQVDYYSSNAGWKVERYHRIG 244 (302)
T ss_dssp CTTCCCCCHHHHHHHHHHHTCEEEEEEECG
T ss_pred CCCCCCCCHHHHHHHHHhCCcEEEEEEeCc
Confidence 235677899999999999999999887653
No 47
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.73 E-value=4.4e-17 Score=144.64 Aligned_cols=144 Identities=15% Similarity=0.198 Sum_probs=112.1
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHC-CCCeEEEeec-hHHHhcCCCC--------------CCeEEEEcCCCC-------C
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAF-PGIKCTVLDL-PHVVANLPEA--------------DNLKYIAGDMFQ-------F 173 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~--------------~rv~~~~~d~~~-------~ 173 (283)
....+|||||||+|.++..+++.+ |+.+++++|+ +.+++.+++. .+++++.+|+.+ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 456899999999999999999987 8899999999 8777766541 689999999987 4
Q ss_pred CC--CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCC
Q 023384 174 IP--PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERT 251 (283)
Q Consensus 174 ~p--~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 251 (283)
++ .||+|++..++|++++.. .+|++++++||| ||.+++.+.......... .......+....+..++
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~~--~~l~~~~r~Lkp---gG~l~i~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 230 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNKL--ALFKEIHRVLRD---GGELYFSDVYADRRLSEA------AQQDPILYGECLGGALY 230 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCHH--HHHHHHHHHEEE---EEEEEEEEEEESSCCCHH------HHHCHHHHHTTCTTCCB
T ss_pred CCCCCEEEEEEccchhcCCCHH--HHHHHHHHHcCC---CCEEEEEEeccccccCHh------HhhhHHHhhcccccCCC
Confidence 44 499999999999998854 889999999999 799999887665432221 01111112222345678
Q ss_pred HHHHHHHHHHCCCCeeeEEE
Q 023384 252 ESEWAKLFFDACFSHYKITP 271 (283)
Q Consensus 252 ~~e~~~ll~~aGf~~~~~~~ 271 (283)
.++|.++|+++||+.+++..
T Consensus 231 ~~~~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 231 LEDFRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp HHHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHHHCCCceEEEEe
Confidence 99999999999999887654
No 48
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.73 E-value=4.2e-17 Score=141.09 Aligned_cols=161 Identities=16% Similarity=0.181 Sum_probs=118.7
Q ss_pred HHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCCCCCC
Q 023384 105 SFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQFIPP 176 (283)
Q Consensus 105 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~~~p~ 176 (283)
..+++ .++ .....+|||||||+|.++..+++.+ +.+++++|+ +++++.+++ .++++++.+|+.+....
T Consensus 80 ~~~~~-~~~--~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 155 (318)
T 2fk8_A 80 DLNLD-KLD--LKPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEP 155 (318)
T ss_dssp HHHHT-TSC--CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCC
T ss_pred HHHHH-hcC--CCCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCC
Confidence 34444 444 5567899999999999999999987 569999999 777776654 25799999998762246
Q ss_pred ceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccch----hhhh-hhhhccccc-ccccCCccC
Q 023384 177 ADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEH----ELTE-TKFLFDIVM-SVNATGKER 250 (283)
Q Consensus 177 ~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~----~~~~-~~~~~~~~~-~~~~~~~~~ 250 (283)
||+|++..++|++++++...+|++++++|+| ||++++.+...+...... +... .....++.. ....++..+
T Consensus 156 fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (318)
T 2fk8_A 156 VDRIVSIEAFEHFGHENYDDFFKRCFNIMPA---DGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLP 232 (318)
T ss_dssp CSEEEEESCGGGTCGGGHHHHHHHHHHHSCT---TCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCC
T ss_pred cCEEEEeChHHhcCHHHHHHHHHHHHHhcCC---CcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCC
Confidence 9999999999999887788999999999999 899999888776532110 0000 000011110 111345667
Q ss_pred CHHHHHHHHHHCCCCeeeEEEc
Q 023384 251 TESEWAKLFFDACFSHYKITPI 272 (283)
Q Consensus 251 t~~e~~~ll~~aGf~~~~~~~~ 272 (283)
+.+++.++++++||+++++...
T Consensus 233 s~~~~~~~l~~aGf~~~~~~~~ 254 (318)
T 2fk8_A 233 STEMMVEHGEKAGFTVPEPLSL 254 (318)
T ss_dssp CHHHHHHHHHHTTCBCCCCEEC
T ss_pred CHHHHHHHHHhCCCEEEEEEec
Confidence 9999999999999999887654
No 49
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.72 E-value=6.8e-17 Score=132.22 Aligned_cols=143 Identities=15% Similarity=0.042 Sum_probs=103.3
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------C----CCeEEEEcCCCC-CCC--CceEE
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------A----DNLKYIAGDMFQ-FIP--PADAF 180 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~----~rv~~~~~d~~~-~~p--~~D~v 180 (283)
.....+|||||||+|.++..+++..|..+++++|+ +.+++.+++ . .+++++.+|+.. +.+ .||+|
T Consensus 27 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V 106 (219)
T 3jwg_A 27 SVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAA 106 (219)
T ss_dssp HTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEE
T ss_pred hcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEE
Confidence 34568999999999999999999999999999999 888877654 1 289999999976 433 59999
Q ss_pred EecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHH----
Q 023384 181 LFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWA---- 256 (283)
Q Consensus 181 ~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~---- 256 (283)
++..++|++++++..++|++++++|+| ||. ++...........+ ...............++.+++.
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~Lkp---gG~-~i~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~ 176 (219)
T 3jwg_A 107 TVIEVIEHLDENRLQAFEKVLFEFTRP---QTV-IVSTPNKEYNFHYG------NLFEGNLRHRDHRFEWTRKEFQTWAV 176 (219)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCC---SEE-EEEEEBGGGGGCCC------CT-----GGGCCTTSBCHHHHHHHHH
T ss_pred EEHHHHHhCCHHHHHHHHHHHHHhhCC---CEE-EEEccchhhhhhhc------ccCcccccccCceeeecHHHHHHHHH
Confidence 999999999998888999999999999 674 44433221110000 0000000011123446888988
Q ss_pred HHHHHCCCCeee
Q 023384 257 KLFFDACFSHYK 268 (283)
Q Consensus 257 ~ll~~aGf~~~~ 268 (283)
++++++||++.-
T Consensus 177 ~l~~~~Gf~v~~ 188 (219)
T 3jwg_A 177 KVAEKYGYSVRF 188 (219)
T ss_dssp HHHHHHTEEEEE
T ss_pred HHHHHCCcEEEE
Confidence 788999997543
No 50
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.72 E-value=9.1e-17 Score=133.41 Aligned_cols=160 Identities=15% Similarity=0.105 Sum_probs=111.3
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCC-CCC-CceEEEecc-cccC
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQ-FIP-PADAFLFKL-VFHG 188 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~-~~p-~~D~v~~~~-vlh~ 188 (283)
...+|||||||+|.++..+++. ..+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|++.. +||+
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~ 114 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCLDSTNY 114 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEECTTGGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCceEEEEcCccccc
Confidence 5689999999999999999988 568999999 788777664 2389999999987 554 599999998 9999
Q ss_pred CCh-hHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccch----hh---------hh------hhhhcccccccccC--
Q 023384 189 LGD-EDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEH----EL---------TE------TKFLFDIVMSVNAT-- 246 (283)
Q Consensus 189 ~~d-~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~----~~---------~~------~~~~~~~~~~~~~~-- 246 (283)
+++ ++...+|++++++|+| ||.+++ +...+...... .+ .. ......+.++...+
T Consensus 115 ~~~~~~~~~~l~~~~~~L~p---gG~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (246)
T 1y8c_A 115 IIDSDDLKKYFKAVSNHLKE---GGVFIF-DINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRDGEF 190 (246)
T ss_dssp CCSHHHHHHHHHHHHTTEEE---EEEEEE-EEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEECSSS
T ss_pred cCCHHHHHHHHHHHHHhcCC---CcEEEE-EecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEEEEecCCc
Confidence 943 6778999999999999 677765 33221100000 00 00 00000111111111
Q ss_pred ---------CccCCHHHHHHHHHHCCCCeeeEEEc--------CCcceEEEEeC
Q 023384 247 ---------GKERTESEWAKLFFDACFSHYKITPI--------FGMRFLIEIYP 283 (283)
Q Consensus 247 ---------~~~~t~~e~~~ll~~aGf~~~~~~~~--------~~~~~~i~~~~ 283 (283)
.+.++.++|.++|+++||+++++... .....+++|+|
T Consensus 191 ~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~~~~~~~~~~varK 244 (246)
T 1y8c_A 191 YKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDCYSNKKVEKFTERITYLVKL 244 (246)
T ss_dssp EEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEESSSSCBCCTTCSEEEEEEEE
T ss_pred ccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcccccCcCCCCceeEEEEEEe
Confidence 24569999999999999999998754 12345777775
No 51
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.72 E-value=4.6e-17 Score=132.49 Aligned_cols=138 Identities=13% Similarity=0.077 Sum_probs=108.4
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCC-CCC-CceEEEecccccCCChh
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQ-FIP-PADAFLFKLVFHGLGDE 192 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~-~~p-~~D~v~~~~vlh~~~d~ 192 (283)
++...+|||||||+|.++..+++. +.+++++|+ +.+++.+++..++.++.+|+.+ +.+ .||+|++..++|+++++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~ 118 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRLGRPVRTMLFHQLDAIDAYDAVWAHACLLHVPRD 118 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTSCCEECCGGGCCCCSCEEEEEECSCGGGSCHH
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhcCCceEEeeeccCCCCCcEEEEEecCchhhcCHH
Confidence 456789999999999999999987 679999999 8888777653367888999887 533 49999999999999988
Q ss_pred HHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCC-CCeeeEEE
Q 023384 193 DGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAC-FSHYKITP 271 (283)
Q Consensus 193 ~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aG-f~~~~~~~ 271 (283)
+...+|++++++|+| ||.+++............ .. ..-..++.++|.++++++| |+++++..
T Consensus 119 ~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~--------~~------~~~~~~~~~~~~~~l~~aG~f~~~~~~~ 181 (211)
T 3e23_A 119 ELADVLKLIWRALKP---GGLFYASYKSGEGEGRDK--------LA------RYYNYPSEEWLRARYAEAGTWASVAVES 181 (211)
T ss_dssp HHHHHHHHHHHHEEE---EEEEEEEEECCSSCEECT--------TS------CEECCCCHHHHHHHHHHHCCCSEEEEEE
T ss_pred HHHHHHHHHHHhcCC---CcEEEEEEcCCCcccccc--------cc------hhccCCCHHHHHHHHHhCCCcEEEEEEe
Confidence 889999999999999 788877654332211110 00 0123468999999999999 99998865
Q ss_pred c
Q 023384 272 I 272 (283)
Q Consensus 272 ~ 272 (283)
.
T Consensus 182 ~ 182 (211)
T 3e23_A 182 S 182 (211)
T ss_dssp E
T ss_pred c
Confidence 4
No 52
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.72 E-value=3.1e-17 Score=138.44 Aligned_cols=143 Identities=14% Similarity=0.133 Sum_probs=111.7
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC-CCC--CceEEEecc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ-FIP--PADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~-~~p--~~D~v~~~~ 184 (283)
+....+|||||||+|.++..+++. +..+++++|+ +.+++.+++ .++++++.+|+.+ +++ .||+|++..
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~ 122 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEG 122 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESS
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcC
Confidence 456789999999999999999998 8889999999 877776654 3679999999988 654 499999999
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCC
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACF 264 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 264 (283)
++|++ +. ..+|++++++|+| ||.+++.+............ ...+. .......+.+++.++++++||
T Consensus 123 ~~~~~-~~--~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~~~~~~l~~aGf 188 (267)
T 3kkz_A 123 AIYNI-GF--ERGLNEWRKYLKK---GGYLAVSECSWFTDERPAEI--NDFWM------DAYPEIDTIPNQVAKIHKAGY 188 (267)
T ss_dssp CGGGT-CH--HHHHHHHGGGEEE---EEEEEEEEEEESSSCCCHHH--HHHHH------HHCTTCEEHHHHHHHHHHTTE
T ss_pred Cceec-CH--HHHHHHHHHHcCC---CCEEEEEEeeecCCCChHHH--HHHHH------HhCCCCCCHHHHHHHHHHCCC
Confidence 99999 33 5789999999999 89999998875443322101 00110 011244589999999999999
Q ss_pred CeeeEEEcC
Q 023384 265 SHYKITPIF 273 (283)
Q Consensus 265 ~~~~~~~~~ 273 (283)
+++++...+
T Consensus 189 ~~v~~~~~~ 197 (267)
T 3kkz_A 189 LPVATFILP 197 (267)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEECC
Confidence 999887764
No 53
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.72 E-value=6.1e-17 Score=135.42 Aligned_cols=149 Identities=16% Similarity=0.124 Sum_probs=105.9
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---CCCeEEEEcCCCC-CCC--CceEEEecccccCC
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE---ADNLKYIAGDMFQ-FIP--PADAFLFKLVFHGL 189 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---~~rv~~~~~d~~~-~~p--~~D~v~~~~vlh~~ 189 (283)
....+|||||||+|.++..+++..+. +++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++..++|++
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 121 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYI 121 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGC
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhh
Confidence 35689999999999999999998665 8999999 778777654 4789999999987 654 49999999999999
Q ss_pred ChhHHHHHHHHHHHhhccCCCCcEEEEEeeecC------------CCccchhhhhhhhhccccc----cc--ccCCccCC
Q 023384 190 GDEDGLKILKKRRAAIASNGERGKVIIIDIVIN------------AEEEEHELTETKFLFDIVM----SV--NATGKERT 251 (283)
Q Consensus 190 ~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~------------~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~t 251 (283)
++. .++|++++++|+| ||.+++...... .......... ..+++-.. +. ......+|
T Consensus 122 ~~~--~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~t 195 (253)
T 3g5l_A 122 ASF--DDICKKVYINLKS---SGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPV-DRYFNESMRTSHFLGEDVQKYHRT 195 (253)
T ss_dssp SCH--HHHHHHHHHHEEE---EEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEE-CCTTCCCEEEEEETTEEEEEECCC
T ss_pred hhH--HHHHHHHHHHcCC---CcEEEEEeCCCccccCccccceeccCCceEEEEe-ccccccceEEEeeccccCccEecC
Confidence 765 5889999999999 788877643211 0000000000 00000000 00 01122349
Q ss_pred HHHHHHHHHHCCCCeeeEEEc
Q 023384 252 ESEWAKLFFDACFSHYKITPI 272 (283)
Q Consensus 252 ~~e~~~ll~~aGf~~~~~~~~ 272 (283)
.++|.++|+++||+++++...
T Consensus 196 ~~~~~~~l~~aGF~~~~~~e~ 216 (253)
T 3g5l_A 196 VTTYIQTLLKNGFQINSVIEP 216 (253)
T ss_dssp HHHHHHHHHHTTEEEEEEECC
T ss_pred HHHHHHHHHHcCCeeeeeecC
Confidence 999999999999999988754
No 54
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.72 E-value=4.8e-17 Score=138.63 Aligned_cols=151 Identities=15% Similarity=0.198 Sum_probs=110.0
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCC-CeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCC-CCCC-ceEEEecccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPG-IKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQ-FIPP-ADAFLFKLVF 186 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~-~~p~-~D~v~~~~vl 186 (283)
.....+|||||||+|.++..+++.+|. .+++++|+ +.+++.+++ ..+++++.+|+.+ +.++ ||+|++..++
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l 99 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKYDIAICHAFL 99 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSSCEEEEEEESCG
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcCCCeeEEEECChh
Confidence 456789999999999999999999995 89999999 777766554 3489999999998 5554 9999999999
Q ss_pred cCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeec-----C---CCccchhhhhhhhhccccc--ccccCCccCCHHHHH
Q 023384 187 HGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVI-----N---AEEEEHELTETKFLFDIVM--SVNATGKERTESEWA 256 (283)
Q Consensus 187 h~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~-----~---~~~~~~~~~~~~~~~~~~~--~~~~~~~~~t~~e~~ 256 (283)
|++++.. ++|++++++|+| ||.+++.++.. . +....++......+..+.. ....+....+..++.
T Consensus 100 ~~~~~~~--~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (284)
T 3gu3_A 100 LHMTTPE--TMLQKMIHSVKK---GGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGNIGMKIP 174 (284)
T ss_dssp GGCSSHH--HHHHHHHHTEEE---EEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTTGGGTHH
T ss_pred hcCCCHH--HHHHHHHHHcCC---CCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcccccHHHHHH
Confidence 9998865 889999999999 89999988651 1 1111100000001111110 001233445677899
Q ss_pred HHHHHCCCCeeeEEE
Q 023384 257 KLFFDACFSHYKITP 271 (283)
Q Consensus 257 ~ll~~aGf~~~~~~~ 271 (283)
++|++|||+.+++..
T Consensus 175 ~~l~~aGF~~v~~~~ 189 (284)
T 3gu3_A 175 IYLSELGVKNIECRV 189 (284)
T ss_dssp HHHHHTTCEEEEEEE
T ss_pred HHHHHcCCCeEEEEE
Confidence 999999999987743
No 55
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.71 E-value=8.1e-17 Score=132.79 Aligned_cols=148 Identities=14% Similarity=0.211 Sum_probs=109.6
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----------CCCeEEEEcCCCC-CCC--CceEE
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----------ADNLKYIAGDMFQ-FIP--PADAF 180 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------~~rv~~~~~d~~~-~~p--~~D~v 180 (283)
++...+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 105 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFA 105 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEE
Confidence 456789999999999999999998 679999999 777765543 2368999999988 654 49999
Q ss_pred EecccccCCChh-HHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccc------cc---------
Q 023384 181 LFKLVFHGLGDE-DGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMS------VN--------- 244 (283)
Q Consensus 181 ~~~~vlh~~~d~-~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~------~~--------- 244 (283)
++..++|++++. +..++|++++++|+| ||++++.+.......... .......+... ..
T Consensus 106 ~~~~~l~~~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (235)
T 3sm3_A 106 VMQAFLTSVPDPKERSRIIKEVFRVLKP---GAYLYLVEFGQNWHLKLY---RKRYLHDFPITKEEGSFLARDPETGETE 179 (235)
T ss_dssp EEESCGGGCCCHHHHHHHHHHHHHHEEE---EEEEEEEEEBCCTTSHHH---HHHHHHHHHHHCSTTEEEEECTTTCCEE
T ss_pred EEcchhhcCCCHHHHHHHHHHHHHHcCC---CeEEEEEECCcchhHHHH---HHHhhhhccchhhhcceEecccccCCcc
Confidence 999999999764 466899999999999 799999887654332210 00000000000 00
Q ss_pred cCCccCCHHHHHHHHHHCCCCeeeEEE
Q 023384 245 ATGKERTESEWAKLFFDACFSHYKITP 271 (283)
Q Consensus 245 ~~~~~~t~~e~~~ll~~aGf~~~~~~~ 271 (283)
.....++.++|.++|+++||+++++..
T Consensus 180 ~~~~~~~~~~l~~ll~~aGf~~~~~~~ 206 (235)
T 3sm3_A 180 FIAHHFTEKELVFLLTDCRFEIDYFRV 206 (235)
T ss_dssp EEEECBCHHHHHHHHHTTTEEEEEEEE
T ss_pred eeeEeCCHHHHHHHHHHcCCEEEEEEe
Confidence 012467999999999999999998754
No 56
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.71 E-value=5.5e-17 Score=134.90 Aligned_cols=147 Identities=14% Similarity=0.163 Sum_probs=106.3
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--CCCeEEEEcCCCCCCC--CceEEEecccccCCCh
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE--ADNLKYIAGDMFQFIP--PADAFLFKLVFHGLGD 191 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~~rv~~~~~d~~~~~p--~~D~v~~~~vlh~~~d 191 (283)
....+|||||||+|.++..+++..+ +++++|+ +.+++.+++ ..+++++.+|+.+..+ .||+|++.++|||+++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~ 118 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDNIVLTHVLEHIDD 118 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEEEEEESCGGGCSS
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccEEEEhhHHHhhcC
Confidence 4557899999999999999999876 7899999 778777665 2289999999987433 4999999999999988
Q ss_pred hHHHHHHHHHH-HhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcc---ccc--ccccCCccCCHHHHHHHHHHCCCC
Q 023384 192 EDGLKILKKRR-AAIASNGERGKVIIIDIVINAEEEEHELTETKFLFD---IVM--SVNATGKERTESEWAKLFFDACFS 265 (283)
Q Consensus 192 ~~~~~iL~~~~-~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~t~~e~~~ll~~aGf~ 265 (283)
.. .+|++++ ++|+| ||++++.++........... ....... +.. ........++.+++.++|+++||+
T Consensus 119 ~~--~~l~~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 192 (250)
T 2p7i_A 119 PV--ALLKRINDDWLAE---GGRLFLVCPNANAVSRQIAV-KMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQ 192 (250)
T ss_dssp HH--HHHHHHHHTTEEE---EEEEEEEEECTTCHHHHHHH-HTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCE
T ss_pred HH--HHHHHHHHHhcCC---CCEEEEEcCChHHHHHHHHH-HcCccccchhcccccccccccccCCHHHHHHHHHHCCCe
Confidence 64 8899999 99999 78988877543221100000 0000000 000 011123567999999999999999
Q ss_pred eeeEEE
Q 023384 266 HYKITP 271 (283)
Q Consensus 266 ~~~~~~ 271 (283)
++++..
T Consensus 193 ~~~~~~ 198 (250)
T 2p7i_A 193 VTYRSG 198 (250)
T ss_dssp EEEEEE
T ss_pred EEEEee
Confidence 998754
No 57
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.71 E-value=3e-16 Score=130.14 Aligned_cols=151 Identities=16% Similarity=0.158 Sum_probs=104.7
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---CCCeEEEEcCCCC-CCC--CceEEEecccccC
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE---ADNLKYIAGDMFQ-FIP--PADAFLFKLVFHG 188 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---~~rv~~~~~d~~~-~~p--~~D~v~~~~vlh~ 188 (283)
.....+|||||||+|.++..+++..+ .+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++..++|+
T Consensus 41 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 119 (243)
T 3bkw_A 41 EVGGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHY 119 (243)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGG
T ss_pred ccCCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEeccccc
Confidence 34568999999999999999998732 38999999 777776654 3579999999988 654 4999999999999
Q ss_pred CChhHHHHHHHHHHHhhccCCCCcEEEEEeeecC---CCccchhhhh-------hhhhcc-----ccccc-ccCCccCCH
Q 023384 189 LGDEDGLKILKKRRAAIASNGERGKVIIIDIVIN---AEEEEHELTE-------TKFLFD-----IVMSV-NATGKERTE 252 (283)
Q Consensus 189 ~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~---~~~~~~~~~~-------~~~~~~-----~~~~~-~~~~~~~t~ 252 (283)
+++. ..+|++++++|+| ||++++...... .......... ...+.. ...+. ......++.
T Consensus 120 ~~~~--~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 194 (243)
T 3bkw_A 120 VEDV--ARLFRTVHQALSP---GGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTV 194 (243)
T ss_dssp CSCH--HHHHHHHHHHEEE---EEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCH
T ss_pred cchH--HHHHHHHHHhcCc---CcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEeccH
Confidence 9864 4889999999999 788888664211 0000000000 000000 00000 011223689
Q ss_pred HHHHHHHHHCCCCeeeEEEc
Q 023384 253 SEWAKLFFDACFSHYKITPI 272 (283)
Q Consensus 253 ~e~~~ll~~aGf~~~~~~~~ 272 (283)
++|.++|+++||+++++...
T Consensus 195 ~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 195 GTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp HHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHcCCEeeeeccC
Confidence 99999999999999988754
No 58
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.70 E-value=2.4e-16 Score=132.58 Aligned_cols=150 Identities=12% Similarity=0.177 Sum_probs=112.2
Q ss_pred HHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCC-CCC--CceEE
Q 023384 105 SFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQ-FIP--PADAF 180 (283)
Q Consensus 105 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~-~~p--~~D~v 180 (283)
..+.+ .++ .....+|||||||+|.++..+++ |+.+++++|+ +.+++.+++..+++++.+|+.+ +++ .||+|
T Consensus 24 ~~l~~-~~~--~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v 98 (261)
T 3ege_A 24 NAIIN-LLN--LPKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGV 98 (261)
T ss_dssp HHHHH-HHC--CCTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEE
T ss_pred HHHHH-HhC--CCCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEE
Confidence 34445 444 56778999999999999999997 7889999999 8888888875699999999988 665 49999
Q ss_pred EecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccc-cCCccCCHHHHHHHH
Q 023384 181 LFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVN-ATGKERTESEWAKLF 259 (283)
Q Consensus 181 ~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~t~~e~~~ll 259 (283)
++.+++|++++.. .+|++++++|| ||++++.+...+...... .. ..+..... ......+.+++. +|
T Consensus 99 ~~~~~l~~~~~~~--~~l~~~~~~Lk----gG~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~-~l 165 (261)
T 3ege_A 99 ISILAIHHFSHLE--KSFQEMQRIIR----DGTIVLLTFDIRLAQRIW----LY--DYFPFLWEDALRFLPLDEQIN-LL 165 (261)
T ss_dssp EEESCGGGCSSHH--HHHHHHHHHBC----SSCEEEEEECGGGCCCCG----GG--GTCHHHHHHHHTSCCHHHHHH-HH
T ss_pred EEcchHhhccCHH--HHHHHHHHHhC----CcEEEEEEcCCchhHHHH----HH--HHHHHHhhhhhhhCCCHHHHH-HH
Confidence 9999999997754 88999999999 388999887543322110 00 00000001 123445678899 99
Q ss_pred HHCCCCeeeEEEc
Q 023384 260 FDACFSHYKITPI 272 (283)
Q Consensus 260 ~~aGf~~~~~~~~ 272 (283)
+++||+.+++...
T Consensus 166 ~~aGF~~v~~~~~ 178 (261)
T 3ege_A 166 QENTKRRVEAIPF 178 (261)
T ss_dssp HHHHCSEEEEEEC
T ss_pred HHcCCCceeEEEe
Confidence 9999999887654
No 59
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.70 E-value=6.9e-17 Score=130.89 Aligned_cols=134 Identities=12% Similarity=0.070 Sum_probs=104.5
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------------------CCCeEEEEcCCCC-CCC
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------------------ADNLKYIAGDMFQ-FIP 175 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------------------~~rv~~~~~d~~~-~~p 175 (283)
.....+|||+|||+|..+..++++ +.+++++|+ +.+++.+++ ..+++++.+|+++ +.+
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 456789999999999999999998 569999999 788876653 2579999999998 543
Q ss_pred ---CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCH
Q 023384 176 ---PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTE 252 (283)
Q Consensus 176 ---~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 252 (283)
.||+|++..++|++++++..+++++++++||| ||+++++....+..... ......+.
T Consensus 98 ~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkp---gG~~~l~~~~~~~~~~~-----------------~~~~~~~~ 157 (203)
T 1pjz_A 98 DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQ---ACSGLLITLEYDQALLE-----------------GPPFSVPQ 157 (203)
T ss_dssp HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCS---EEEEEEEEESSCSSSSS-----------------SCCCCCCH
T ss_pred cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCC---CcEEEEEEEecCccccC-----------------CCCCCCCH
Confidence 59999999999999988888899999999999 78855555433211000 00112579
Q ss_pred HHHHHHHHHCCCCeeeEEEc
Q 023384 253 SEWAKLFFDACFSHYKITPI 272 (283)
Q Consensus 253 ~e~~~ll~~aGf~~~~~~~~ 272 (283)
+|+.+++++ ||++..+...
T Consensus 158 ~el~~~~~~-gf~i~~~~~~ 176 (203)
T 1pjz_A 158 TWLHRVMSG-NWEVTKVGGQ 176 (203)
T ss_dssp HHHHHTSCS-SEEEEEEEES
T ss_pred HHHHHHhcC-CcEEEEeccc
Confidence 999999998 9998776554
No 60
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.70 E-value=3.4e-16 Score=129.88 Aligned_cols=161 Identities=16% Similarity=0.271 Sum_probs=111.1
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCC-CCC-CceEEEecc-cc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQ-FIP-PADAFLFKL-VF 186 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~-~~p-~~D~v~~~~-vl 186 (283)
+....+|||||||+|.++..+++. .+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|++.. ++
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~~ 107 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAITILCDSL 107 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEEEECTTGG
T ss_pred cCCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEEEEeCCch
Confidence 445589999999999999998887 79999999 888877664 3679999999987 555 499999986 89
Q ss_pred cCC-ChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccc----hhh---------h--------hhhhhcccccccc
Q 023384 187 HGL-GDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEE----HEL---------T--------ETKFLFDIVMSVN 244 (283)
Q Consensus 187 h~~-~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~----~~~---------~--------~~~~~~~~~~~~~ 244 (283)
|++ +.++...+|++++++|+| ||.+++ +...+..... ..+ . ......++.++..
T Consensus 108 ~~~~~~~~~~~~l~~~~~~L~p---gG~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (243)
T 3d2l_A 108 NYLQTEADVKQTFDSAARLLTD---GGKLLF-DVHSPYKMETLFNGKTYATHAEQSSYIWFADPGEEPLSVVHELTFFIE 183 (243)
T ss_dssp GGCCSHHHHHHHHHHHHHHEEE---EEEEEE-EEECHHHHHTTTSSEEEEEECSSEEEEEEEEECSSTTEEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHhcCC---CeEEEE-EcCCHHHHHHhcCCcceeEECCCcEEEEEeecCccccEEEEEEEEEEE
Confidence 988 556778999999999999 677665 3221110000 000 0 0000011111111
Q ss_pred c-C-----------CccCCHHHHHHHHHHCCCCeeeEEEcC--------CcceEEEEeC
Q 023384 245 A-T-----------GKERTESEWAKLFFDACFSHYKITPIF--------GMRFLIEIYP 283 (283)
Q Consensus 245 ~-~-----------~~~~t~~e~~~ll~~aGf~~~~~~~~~--------~~~~~i~~~~ 283 (283)
. + .+.++.+++.++|+++||++++++... ....+++|+|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~va~K 242 (243)
T 3d2l_A 184 GEDGRYDRVDETHHQRTYPPEQYITWLREAGFRVCAVTGDFKSDAPTETAERIFFVAEK 242 (243)
T ss_dssp CTTSCEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEETTSSSCCCTTCSEEEEEEEE
T ss_pred cCCCceEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEecCcccCCCCCCceEEEEEEEe
Confidence 1 1 135799999999999999999987541 2345777776
No 61
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.70 E-value=9.9e-17 Score=131.12 Aligned_cols=140 Identities=15% Similarity=0.057 Sum_probs=103.0
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------C----CCeEEEEcCCCC-CCC--CceEE
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------A----DNLKYIAGDMFQ-FIP--PADAF 180 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~----~rv~~~~~d~~~-~~p--~~D~v 180 (283)
.....+|||||||+|.++..+++.+|..+++++|+ +.+++.+++ . .+++++.+|+.. +.+ .||+|
T Consensus 27 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 106 (217)
T 3jwh_A 27 QSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAA 106 (217)
T ss_dssp HTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEE
T ss_pred hcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEE
Confidence 44568999999999999999999999899999999 777776654 1 289999999876 433 59999
Q ss_pred EecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccc---cccccCCccCCHHHHH-
Q 023384 181 LFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIV---MSVNATGKERTESEWA- 256 (283)
Q Consensus 181 ~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~t~~e~~- 256 (283)
++..++|++++++..++|++++++|+| ||.+++... .+.. ..+..+. .........++.+++.
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~Lkp---gG~li~~~~-~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~l~~ 173 (217)
T 3jwh_A 107 TVIEVIEHLDLSRLGAFERVLFEFAQP---KIVIVTTPN-IEYN---------VKFANLPAGKLRHKDHRFEWTRSQFQN 173 (217)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCC---SEEEEEEEB-HHHH---------HHTC-----------CCSCBCHHHHHH
T ss_pred eeHHHHHcCCHHHHHHHHHHHHHHcCC---CEEEEEccC-cccc---------hhhcccccccccccccccccCHHHHHH
Confidence 999999999998888999999999999 675554432 1100 0010010 0001123456889998
Q ss_pred ---HHHHHCCCCeee
Q 023384 257 ---KLFFDACFSHYK 268 (283)
Q Consensus 257 ---~ll~~aGf~~~~ 268 (283)
++++++||++.-
T Consensus 174 ~~~~~~~~~Gf~v~~ 188 (217)
T 3jwh_A 174 WANKITERFAYNVQF 188 (217)
T ss_dssp HHHHHHHHSSEEEEE
T ss_pred HHHHHHHHcCceEEE
Confidence 889999997643
No 62
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.70 E-value=1.4e-16 Score=133.52 Aligned_cols=153 Identities=14% Similarity=0.075 Sum_probs=108.9
Q ss_pred HHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEcCCCC-CCC-CceEEE
Q 023384 106 FVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAGDMFQ-FIP-PADAFL 181 (283)
Q Consensus 106 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~-~~p-~~D~v~ 181 (283)
.+++ .+. .....+|||||||+|.++..+++.+|..+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|+
T Consensus 24 ~l~~-~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~ 100 (259)
T 2p35_A 24 DLLA-QVP--LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWKPAQKADLLY 100 (259)
T ss_dssp HHHT-TCC--CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCSSCEEEEE
T ss_pred HHHH-hcC--CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcCccCCcCEEE
Confidence 3444 443 45668999999999999999999999999999999 888877765 5789999999988 522 499999
Q ss_pred ecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhccccc-cc---ccCCccCCHHHHHH
Q 023384 182 FKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVM-SV---NATGKERTESEWAK 257 (283)
Q Consensus 182 ~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~t~~e~~~ 257 (283)
+..++|++++. ..+|++++++|+| ||.+++......................+.. +. ......++.++|.+
T Consensus 101 ~~~~l~~~~~~--~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (259)
T 2p35_A 101 ANAVFQWVPDH--LAVLSQLMDQLES---GGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFN 175 (259)
T ss_dssp EESCGGGSTTH--HHHHHHHGGGEEE---EEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHH
T ss_pred EeCchhhCCCH--HHHHHHHHHhcCC---CeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHH
Confidence 99999999775 4789999999999 7888887753322111100000000000000 00 01234578999999
Q ss_pred HHHHCCCCe
Q 023384 258 LFFDACFSH 266 (283)
Q Consensus 258 ll~~aGf~~ 266 (283)
+|+++||++
T Consensus 176 ~l~~aGf~v 184 (259)
T 2p35_A 176 ALSPKSSRV 184 (259)
T ss_dssp HHGGGEEEE
T ss_pred HHHhcCCce
Confidence 999999964
No 63
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.69 E-value=3.4e-16 Score=125.83 Aligned_cols=134 Identities=19% Similarity=0.177 Sum_probs=106.5
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC-CCC-CceEEEecccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ-FIP-PADAFLFKLVF 186 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~~p-~~D~v~~~~vl 186 (283)
.....+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|++..++
T Consensus 30 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l 107 (199)
T 2xvm_A 30 VVKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILSTVVL 107 (199)
T ss_dssp TSCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCCEEEEEEESCG
T ss_pred ccCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCCceEEEEcchh
Confidence 445679999999999999999987 679999999 777776654 2479999999988 554 49999999999
Q ss_pred cCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCe
Q 023384 187 HGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSH 266 (283)
Q Consensus 187 h~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 266 (283)
|++++++...+|++++++|+| ||.+++++....+....+ ......++.+++++++++ |++
T Consensus 108 ~~~~~~~~~~~l~~~~~~L~~---gG~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~l~~~~~~--f~~ 167 (199)
T 2xvm_A 108 MFLEAKTIPGLIANMQRCTKP---GGYNLIVAAMDTADYPCT---------------VGFPFAFKEGELRRYYEG--WER 167 (199)
T ss_dssp GGSCGGGHHHHHHHHHHTEEE---EEEEEEEEEBCCSSSCCC---------------SCCSCCBCTTHHHHHTTT--SEE
T ss_pred hhCCHHHHHHHHHHHHHhcCC---CeEEEEEEeeccCCcCCC---------------CCCCCccCHHHHHHHhcC--CeE
Confidence 999988888999999999999 799888887665432110 011234578999999986 988
Q ss_pred eeEEE
Q 023384 267 YKITP 271 (283)
Q Consensus 267 ~~~~~ 271 (283)
++...
T Consensus 168 ~~~~~ 172 (199)
T 2xvm_A 168 VKYNE 172 (199)
T ss_dssp EEEEC
T ss_pred EEecc
Confidence 87643
No 64
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.69 E-value=1.5e-16 Score=135.14 Aligned_cols=158 Identities=13% Similarity=0.099 Sum_probs=111.5
Q ss_pred HHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEcCCCC-CCC-CceEE
Q 023384 105 SFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAGDMFQ-FIP-PADAF 180 (283)
Q Consensus 105 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~-~~p-~~D~v 180 (283)
..+++ .+. .....+|||||||+|.++..+++ |..+++++|+ +.+++.+++ ..++.++.+|+.+ +++ .||+|
T Consensus 47 ~~l~~-~l~--~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v 121 (279)
T 3ccf_A 47 EDLLQ-LLN--PQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPLDAV 121 (279)
T ss_dssp CHHHH-HHC--CCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCEEEE
T ss_pred HHHHH-HhC--CCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCcCEE
Confidence 34445 444 55678999999999999999998 7889999999 888877665 4689999999988 655 49999
Q ss_pred EecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccch-hhhhhhhhcccccc-cccCCccCCHHHHHHH
Q 023384 181 LFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEH-ELTETKFLFDIVMS-VNATGKERTESEWAKL 258 (283)
Q Consensus 181 ~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~t~~e~~~l 258 (283)
++..++|++++.. .+|++++++|+| ||.+++............ .+............ .......++.+++.++
T Consensus 122 ~~~~~l~~~~d~~--~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (279)
T 3ccf_A 122 FSNAMLHWVKEPE--AAIASIHQALKS---GGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNI 196 (279)
T ss_dssp EEESCGGGCSCHH--HHHHHHHHHEEE---EEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHH
T ss_pred EEcchhhhCcCHH--HHHHHHHHhcCC---CcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHH
Confidence 9999999998765 789999999999 788887665332211100 00000000000000 0011235689999999
Q ss_pred HHHCCCCeeeEEEc
Q 023384 259 FFDACFSHYKITPI 272 (283)
Q Consensus 259 l~~aGf~~~~~~~~ 272 (283)
|+++||+++++...
T Consensus 197 l~~aGf~~~~~~~~ 210 (279)
T 3ccf_A 197 LEKQGFDVTYAALF 210 (279)
T ss_dssp HHHHTEEEEEEEEE
T ss_pred HHHcCCEEEEEEEe
Confidence 99999999876543
No 65
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.69 E-value=6.5e-16 Score=126.50 Aligned_cols=137 Identities=13% Similarity=0.084 Sum_probs=101.2
Q ss_pred CCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCC-CCC--CceEEEecccccCCChhHH
Q 023384 119 LGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQ-FIP--PADAFLFKLVFHGLGDEDG 194 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~-~~p--~~D~v~~~~vlh~~~d~~~ 194 (283)
..+|||||||+|.++..+++. +++|+ +.+++.+++. +++++.+|+.+ +++ .||+|++..++|++++..
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~- 119 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-GVFVLKGTAENLPLKDESFDFALMVTTICFVDDPE- 119 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-TCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCHH-
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-CCEEEEcccccCCCCCCCeeEEEEcchHhhccCHH-
Confidence 689999999999999988765 99999 7777776644 79999999987 654 499999999999997754
Q ss_pred HHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCeeeEEEc
Q 023384 195 LKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKITPI 272 (283)
Q Consensus 195 ~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 272 (283)
.+|++++++|+| ||.+++.+...... .. ..................++.+++.++|+++||+++++...
T Consensus 120 -~~l~~~~~~L~p---gG~l~i~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 120 -RALKEAYRILKK---GGYLIVGIVDRESF-LG----REYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQT 188 (219)
T ss_dssp -HHHHHHHHHEEE---EEEEEEEEECSSSH-HH----HHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred -HHHHHHHHHcCC---CcEEEEEEeCCccH-HH----HHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEecc
Confidence 889999999999 78888876543211 10 00000000000011245579999999999999999987654
No 66
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.69 E-value=1.7e-16 Score=130.02 Aligned_cols=152 Identities=14% Similarity=0.109 Sum_probs=107.6
Q ss_pred HHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCC-----C-CC-c
Q 023384 106 FVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQF-----I-PP-A 177 (283)
Q Consensus 106 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~-----~-p~-~ 177 (283)
.++. .+. .....+|||||||+|.++..+++. +.+++++|+ +.+++.+++..++.+..+|+.+. . .. |
T Consensus 43 ~~~~-~~~--~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~f 117 (227)
T 3e8s_A 43 AILL-AIL--GRQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDY 117 (227)
T ss_dssp HHHH-HHH--HTCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCE
T ss_pred HHHH-Hhh--cCCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCc
Confidence 3444 443 445589999999999999999988 679999999 88888777667788888877651 1 23 9
Q ss_pred eEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhccccccc------ccCCccCC
Q 023384 178 DAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSV------NATGKERT 251 (283)
Q Consensus 178 D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~t 251 (283)
|+|++..++| +.+. ..+|++++++|+| ||.+++.+.......... +. ..+....... ......++
T Consensus 118 D~v~~~~~l~-~~~~--~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~ 188 (227)
T 3e8s_A 118 DLICANFALL-HQDI--IELLSAMRTLLVP---GGALVIQTLHPWSVADGD-YQ--DGWREESFAGFAGDWQPMPWYFRT 188 (227)
T ss_dssp EEEEEESCCC-SSCC--HHHHHHHHHTEEE---EEEEEEEECCTTTTCTTC-CS--CEEEEECCTTSSSCCCCEEEEECC
T ss_pred cEEEECchhh-hhhH--HHHHHHHHHHhCC---CeEEEEEecCccccCccc-cc--cccchhhhhccccCcccceEEEec
Confidence 9999999999 6554 4889999999999 788888776543322110 00 0000000000 01123469
Q ss_pred HHHHHHHHHHCCCCeeeEEE
Q 023384 252 ESEWAKLFFDACFSHYKITP 271 (283)
Q Consensus 252 ~~e~~~ll~~aGf~~~~~~~ 271 (283)
.++|.++|+++||+++++..
T Consensus 189 ~~~~~~~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 189 LASWLNALDMAGLRLVSLQE 208 (227)
T ss_dssp HHHHHHHHHHTTEEEEEEEC
T ss_pred HHHHHHHHHHcCCeEEEEec
Confidence 99999999999999998865
No 67
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.69 E-value=5.9e-16 Score=123.73 Aligned_cols=126 Identities=16% Similarity=0.188 Sum_probs=104.8
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEcCCCC-CCC--CceEEEec-ccccCC
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAGDMFQ-FIP--PADAFLFK-LVFHGL 189 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~-~~p--~~D~v~~~-~vlh~~ 189 (283)
.+...+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..++.++.+|+.+ +++ .||+|++. .++|++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~ 121 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFL 121 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGS
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhc
Confidence 456689999999999999999987 679999999 777777665 5679999999998 655 49999998 899999
Q ss_pred ChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCeeeE
Q 023384 190 GDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKI 269 (283)
Q Consensus 190 ~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 269 (283)
++++...+|+++++.|+| ||.+++.... ...++.+++.++++++||++.++
T Consensus 122 ~~~~~~~~l~~~~~~l~~---~G~l~~~~~~--------------------------~~~~~~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 122 AEDGREPALANIHRALGA---DGRAVIGFGA--------------------------GRGWVFGDFLEVAERVGLELENA 172 (195)
T ss_dssp CHHHHHHHHHHHHHHEEE---EEEEEEEEET--------------------------TSSCCHHHHHHHHHHHTEEEEEE
T ss_pred ChHHHHHHHHHHHHHhCC---CCEEEEEeCC--------------------------CCCcCHHHHHHHHHHcCCEEeee
Confidence 888888999999999999 6887775421 11257899999999999999887
Q ss_pred EEc
Q 023384 270 TPI 272 (283)
Q Consensus 270 ~~~ 272 (283)
...
T Consensus 173 ~~~ 175 (195)
T 3cgg_A 173 FES 175 (195)
T ss_dssp ESS
T ss_pred ecc
Confidence 543
No 68
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.68 E-value=3.6e-17 Score=139.94 Aligned_cols=147 Identities=14% Similarity=0.223 Sum_probs=103.7
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------C---------------------------
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------A--------------------------- 160 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~--------------------------- 160 (283)
+....+|||||||+|.++..+++.+|..+++++|+ +.+++.|++ .
T Consensus 44 ~~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (292)
T 3g07_A 44 WFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKR 123 (292)
T ss_dssp GTTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC---------------------------------
T ss_pred hcCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccc
Confidence 33568999999999999999999999999999999 777765543 0
Q ss_pred ------------------------------CCeEEEEcCCCC-C-------CCCceEEEecccccCC----ChhHHHHHH
Q 023384 161 ------------------------------DNLKYIAGDMFQ-F-------IPPADAFLFKLVFHGL----GDEDGLKIL 198 (283)
Q Consensus 161 ------------------------------~rv~~~~~d~~~-~-------~p~~D~v~~~~vlh~~----~d~~~~~iL 198 (283)
.+|+|+.+|+.. + .+.||+|++..++|++ +++...++|
T Consensus 124 ~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l 203 (292)
T 3g07_A 124 SCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMF 203 (292)
T ss_dssp ------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHH
Confidence 589999999986 3 1249999999999655 777889999
Q ss_pred HHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHH--CCCCeeeEEEc
Q 023384 199 KKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFD--ACFSHYKITPI 272 (283)
Q Consensus 199 ~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~--aGf~~~~~~~~ 272 (283)
++++++|+| ||.+++........... . ...-.............+++.++|.+ +||+.+++...
T Consensus 204 ~~~~~~Lkp---GG~lil~~~~~~~y~~~------~-~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~~ 269 (292)
T 3g07_A 204 RRIYRHLRP---GGILVLEPQPWSSYGKR------K-TLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVAT 269 (292)
T ss_dssp HHHHHHEEE---EEEEEEECCCHHHHHTT------T-TSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC--
T ss_pred HHHHHHhCC---CcEEEEecCCchhhhhh------h-cccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEecc
Confidence 999999999 67766643211100000 0 00000000011223457899999999 99998887654
No 69
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.67 E-value=3.2e-16 Score=133.44 Aligned_cols=149 Identities=15% Similarity=0.213 Sum_probs=107.7
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC-C-CC--CceEEEeccc
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ-F-IP--PADAFLFKLV 185 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~-~-~p--~~D~v~~~~v 185 (283)
...+|||||||+|.++..+++. ..+++++|+ +.+++.+++ ..+++++.+|+.+ + ++ .||+|++..+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV 145 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC
T ss_pred CCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch
Confidence 3579999999999999999988 679999999 888877664 2689999999988 4 33 4999999999
Q ss_pred ccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhh-hhhhc-cccc---ccccCCccCCHHHHHHHHH
Q 023384 186 FHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTE-TKFLF-DIVM---SVNATGKERTESEWAKLFF 260 (283)
Q Consensus 186 lh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~-~~~~~-~~~~---~~~~~~~~~t~~e~~~ll~ 260 (283)
+|++++.. .+|++++++|+| ||.+++.+.............. ..... .... ........++.+++.++|+
T Consensus 146 l~~~~~~~--~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 220 (285)
T 4htf_A 146 LEWVADPR--SVLQTLWSVLRP---GGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLE 220 (285)
T ss_dssp GGGCSCHH--HHHHHHHHTEEE---EEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHH
T ss_pred hhcccCHH--HHHHHHHHHcCC---CeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHH
Confidence 99998764 789999999999 7888887754322110000000 00000 0000 0011235578999999999
Q ss_pred HCCCCeeeEEEcC
Q 023384 261 DACFSHYKITPIF 273 (283)
Q Consensus 261 ~aGf~~~~~~~~~ 273 (283)
++||+++++....
T Consensus 221 ~aGf~v~~~~~~~ 233 (285)
T 4htf_A 221 EAGWQIMGKTGVR 233 (285)
T ss_dssp HTTCEEEEEEEES
T ss_pred HCCCceeeeeeEE
Confidence 9999999887654
No 70
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.66 E-value=7.8e-16 Score=130.20 Aligned_cols=158 Identities=11% Similarity=0.123 Sum_probs=111.4
Q ss_pred HHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHC-CCCeEEEeec-hH------HHhcCCC-------CCCeEEEEcC-
Q 023384 106 FVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAF-PGIKCTVLDL-PH------VVANLPE-------ADNLKYIAGD- 169 (283)
Q Consensus 106 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~D~-~~------~~~~a~~-------~~rv~~~~~d- 169 (283)
.+++ .++ .....+|||||||+|.++..+++.+ |+.+++++|+ +. +++.+++ .++++++.+|
T Consensus 34 ~l~~-~~~--~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 110 (275)
T 3bkx_A 34 AIAE-AWQ--VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTN 110 (275)
T ss_dssp HHHH-HHT--CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCC
T ss_pred HHHH-HcC--CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECCh
Confidence 4455 554 6677899999999999999999996 8899999999 54 5655543 2689999998
Q ss_pred CCC---CCC--CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhh-hhhcc--ccc
Q 023384 170 MFQ---FIP--PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTET-KFLFD--IVM 241 (283)
Q Consensus 170 ~~~---~~p--~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~-~~~~~--~~~ 241 (283)
+.. +++ .||+|++..++|++++.. .+++.+++.++| ||.+++.+...+...... .... ..... +..
T Consensus 111 ~~~~~~~~~~~~fD~v~~~~~l~~~~~~~--~~~~~~~~l~~~---gG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 184 (275)
T 3bkx_A 111 LSDDLGPIADQHFDRVVLAHSLWYFASAN--ALALLFKNMAAV---CDHVDVAEWSMQPTALDQ-IGHLQAAMIQGLLYA 184 (275)
T ss_dssp TTTCCGGGTTCCCSEEEEESCGGGSSCHH--HHHHHHHHHTTT---CSEEEEEEECSSCSSGGG-HHHHHHHHHHHHHHH
T ss_pred hhhccCCCCCCCEEEEEEccchhhCCCHH--HHHHHHHHHhCC---CCEEEEEEecCCCCchhh-hhHHHHHHHHHHHhh
Confidence 543 333 499999999999999876 467777777777 799999998776543221 0000 00000 000
Q ss_pred cc---c-cCCccCCHHHHHHHHHHCCCCeeeEEEc
Q 023384 242 SV---N-ATGKERTESEWAKLFFDACFSHYKITPI 272 (283)
Q Consensus 242 ~~---~-~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 272 (283)
.. . .....++.+++.++++++||+++++...
T Consensus 185 ~~~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 185 IAPSDVANIRTLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp HSCCTTCSCCCCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred ccccccccccccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 00 0 1123579999999999999999877654
No 71
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.66 E-value=4.3e-16 Score=129.63 Aligned_cols=149 Identities=18% Similarity=0.239 Sum_probs=108.6
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---CCCeEEEEcCCCC-CCC-------CceEEEec
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE---ADNLKYIAGDMFQ-FIP-------PADAFLFK 183 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---~~rv~~~~~d~~~-~~p-------~~D~v~~~ 183 (283)
.....+|||||||+|.++..+++..+ +++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|++.
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEc
Confidence 45668999999999999999999987 8999999 778776654 4589999999998 432 28999999
Q ss_pred ccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhh--hhhcccc--cccccCCccCCHHHHHHHH
Q 023384 184 LVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTET--KFLFDIV--MSVNATGKERTESEWAKLF 259 (283)
Q Consensus 184 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~t~~e~~~ll 259 (283)
.++|++++++..++|++++++|+| ||+++|.+...++.......... .....+. +-.......++.+++.+++
T Consensus 132 ~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (245)
T 3ggd_A 132 TGFHHIPVEKRELLGQSLRILLGK---QGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF 208 (245)
T ss_dssp SSSTTSCGGGHHHHHHHHHHHHTT---TCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC
T ss_pred chhhcCCHHHHHHHHHHHHHHcCC---CCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh
Confidence 999999988888999999999999 89999999865432110000000 0000000 0000112236899999999
Q ss_pred HHCCCCeeeEEE
Q 023384 260 FDACFSHYKITP 271 (283)
Q Consensus 260 ~~aGf~~~~~~~ 271 (283)
+||++++...
T Consensus 209 --aGf~~~~~~~ 218 (245)
T 3ggd_A 209 --PDFEILSQGE 218 (245)
T ss_dssp --TTEEEEEEEC
T ss_pred --CCCEEEeccc
Confidence 9999887543
No 72
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.63 E-value=4.1e-15 Score=121.21 Aligned_cols=123 Identities=15% Similarity=0.143 Sum_probs=97.1
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEEEcCCCC-CCC--CceEEEecccccCCChh
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPEADNLKYIAGDMFQ-FIP--PADAFLFKLVFHGLGDE 192 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~rv~~~~~d~~~-~~p--~~D~v~~~~vlh~~~d~ 192 (283)
.....+|||||||+|.++..++ .+++++|+.+. ++.++.+|+.+ +++ .||+|++..++| +.+
T Consensus 65 ~~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~--------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~-~~~- 129 (215)
T 2zfu_A 65 RPASLVVADFGCGDCRLASSIR-----NPVHCFDLASL--------DPRVTVCDMAQVPLEDESVDVAVFCLSLM-GTN- 129 (215)
T ss_dssp SCTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS--------STTEEESCTTSCSCCTTCEEEEEEESCCC-SSC-
T ss_pred cCCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC--------CceEEEeccccCCCCCCCEeEEEEehhcc-ccC-
Confidence 3456899999999999998772 68999998432 57789999988 655 499999999998 444
Q ss_pred HHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCeeeEEEc
Q 023384 193 DGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKITPI 272 (283)
Q Consensus 193 ~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 272 (283)
...+|++++++|+| ||.+++.+... ...+.+++.++++++||+++++...
T Consensus 130 -~~~~l~~~~~~L~~---gG~l~i~~~~~--------------------------~~~~~~~~~~~l~~~Gf~~~~~~~~ 179 (215)
T 2zfu_A 130 -IRDFLEEANRVLKP---GGLLKVAEVSS--------------------------RFEDVRTFLRAVTKLGFKIVSKDLT 179 (215)
T ss_dssp -HHHHHHHHHHHEEE---EEEEEEEECGG--------------------------GCSCHHHHHHHHHHTTEEEEEEECC
T ss_pred -HHHHHHHHHHhCCC---CeEEEEEEcCC--------------------------CCCCHHHHHHHHHHCCCEEEEEecC
Confidence 45889999999999 79988886321 0127899999999999999887666
Q ss_pred CCcceEEEEeC
Q 023384 273 FGMRFLIEIYP 283 (283)
Q Consensus 273 ~~~~~~i~~~~ 283 (283)
.+...+++++|
T Consensus 180 ~~~~~~~~~~k 190 (215)
T 2zfu_A 180 NSHFFLFDFQK 190 (215)
T ss_dssp STTCEEEEEEE
T ss_pred CCeEEEEEEEe
Confidence 66667777764
No 73
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.63 E-value=2e-15 Score=123.84 Aligned_cols=144 Identities=17% Similarity=0.170 Sum_probs=104.4
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCC---CCC--CceEEEecccccCCC
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQ---FIP--PADAFLFKLVFHGLG 190 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~---~~p--~~D~v~~~~vlh~~~ 190 (283)
....+|||||||+|.++..+++. + .+++++|+ +.+++.+++. ..+++.+|+.+ +++ .||+|++..++|+++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~ 107 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEK-LDHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLF 107 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTT-SSEEEESCTTTCCCCSCTTCEEEEEEESCGGGSS
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHh-CCcEEEcchhhcCCCCCCCccCEEEECChhhhcC
Confidence 45689999999999999999988 4 89999999 7777777642 23788999875 333 499999999999998
Q ss_pred hhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhccccc-----ccccCCccCCHHHHHHHHHHCCCC
Q 023384 191 DEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVM-----SVNATGKERTESEWAKLFFDACFS 265 (283)
Q Consensus 191 d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~t~~e~~~ll~~aGf~ 265 (283)
+.. .+|++++++|+| ||.+++..+......... . .....+.. ........++.++|.++++++||+
T Consensus 108 ~~~--~~l~~~~~~L~~---gG~l~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 178 (230)
T 3cc8_A 108 DPW--AVIEKVKPYIKQ---NGVILASIPNVSHISVLA---P-LLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYS 178 (230)
T ss_dssp CHH--HHHHHTGGGEEE---EEEEEEEEECTTSHHHHH---H-HHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEE
T ss_pred CHH--HHHHHHHHHcCC---CCEEEEEeCCcchHHHHH---H-HhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCe
Confidence 864 889999999999 788888765432211000 0 00000000 001123457999999999999999
Q ss_pred eeeEEEc
Q 023384 266 HYKITPI 272 (283)
Q Consensus 266 ~~~~~~~ 272 (283)
++++...
T Consensus 179 ~~~~~~~ 185 (230)
T 3cc8_A 179 ISKVDRV 185 (230)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 9988764
No 74
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.63 E-value=2.8e-15 Score=125.30 Aligned_cols=132 Identities=7% Similarity=-0.012 Sum_probs=103.1
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----------------------CCCeEEEEcCCCC
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----------------------ADNLKYIAGDMFQ 172 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------------------~~rv~~~~~d~~~ 172 (283)
....+|||+|||+|..+..|++. +.+++++|+ +.+++.+++ ..+++++.+|+++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 35689999999999999999987 669999999 777766532 2579999999998
Q ss_pred -CC---CCceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCc
Q 023384 173 -FI---PPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGK 248 (283)
Q Consensus 173 -~~---p~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (283)
+. ..||+|+...+||++++++...++++++++||| ||+++++....+..... ....
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~Lkp---GG~l~l~~~~~~~~~~~-----------------g~~~ 204 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRK---EFQYLVAVLSYDPTKHA-----------------GPPF 204 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEE---EEEEEEEEEECCTTSCC-----------------CSSC
T ss_pred CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCC---CeEEEEEEEecCCccCC-----------------CCCC
Confidence 54 359999999999999988888999999999999 78887666543321100 0011
Q ss_pred cCCHHHHHHHHHHCCCCeeeEEE
Q 023384 249 ERTESEWAKLFFDACFSHYKITP 271 (283)
Q Consensus 249 ~~t~~e~~~ll~~aGf~~~~~~~ 271 (283)
..+.+|+.+++++ +|++..+..
T Consensus 205 ~~~~~el~~~l~~-~f~v~~~~~ 226 (252)
T 2gb4_A 205 YVPSAELKRLFGT-KCSMQCLEE 226 (252)
T ss_dssp CCCHHHHHHHHTT-TEEEEEEEE
T ss_pred CCCHHHHHHHhhC-CeEEEEEec
Confidence 2589999999987 599877654
No 75
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.63 E-value=2.9e-15 Score=125.68 Aligned_cols=144 Identities=11% Similarity=0.085 Sum_probs=102.4
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCC-CCC--CceEEEecccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQ-FIP--PADAFLFKLVF 186 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~-~~p--~~D~v~~~~vl 186 (283)
.....+|||||||+|.++..+++. ..+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++..++
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 114 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLW 114 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCG
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCch
Confidence 456789999999999999999987 578999999 777766543 4689999999987 655 39999999999
Q ss_pred cCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhccccc-ccc---cCCccCCHHHHHHHHHHC
Q 023384 187 HGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVM-SVN---ATGKERTESEWAKLFFDA 262 (283)
Q Consensus 187 h~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~t~~e~~~ll~~a 262 (283)
|++++. ..+|++++++|+| ||.+++. ...++.... ......+..+.. ... .....++.+++.++|+++
T Consensus 115 ~~~~~~--~~~l~~~~~~L~p---gG~l~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 186 (263)
T 2yqz_A 115 HLVPDW--PKVLAEAIRVLKP---GGALLEG-WDQAEASPE--WTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRL 186 (263)
T ss_dssp GGCTTH--HHHHHHHHHHEEE---EEEEEEE-EEEECCCHH--HHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHT
T ss_pred hhcCCH--HHHHHHHHHHCCC---CcEEEEE-ecCCCccHH--HHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHc
Confidence 999875 4789999999999 7888777 222211110 000000000000 000 012345789999999999
Q ss_pred CCCeeeE
Q 023384 263 CFSHYKI 269 (283)
Q Consensus 263 Gf~~~~~ 269 (283)
||+++.+
T Consensus 187 Gf~~~~~ 193 (263)
T 2yqz_A 187 GLKPRTR 193 (263)
T ss_dssp TCCCEEE
T ss_pred CCCcceE
Confidence 9997765
No 76
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.62 E-value=5.9e-15 Score=123.67 Aligned_cols=98 Identities=14% Similarity=0.191 Sum_probs=85.1
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCC-CCC--CceEEEecccccCCChh
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQ-FIP--PADAFLFKLVFHGLGDE 192 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~-~~p--~~D~v~~~~vlh~~~d~ 192 (283)
....+|||||||+|.++..+++.+ .+++++|+ +.+++.+++..+++++.+|+.+ +++ .||+|++..++|+++.+
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~~~ 115 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWFDLD 115 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCCTTCCHH
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeehhHhhHH
Confidence 455799999999999999999875 57999999 8899999888899999999988 776 39999999999877543
Q ss_pred HHHHHHHHHHHhhccCCCCcEEEEEeeecC
Q 023384 193 DGLKILKKRRAAIASNGERGKVIIIDIVIN 222 (283)
Q Consensus 193 ~~~~iL~~~~~~L~p~~~gg~lli~d~~~~ 222 (283)
+.+++++++||| ||.++++....+
T Consensus 116 ---~~~~e~~rvLkp---gG~l~~~~~~~~ 139 (257)
T 4hg2_A 116 ---RFWAELRRVARP---GAVFAAVTYGLT 139 (257)
T ss_dssp ---HHHHHHHHHEEE---EEEEEEEEECCC
T ss_pred ---HHHHHHHHHcCC---CCEEEEEECCCC
Confidence 679999999999 899988876544
No 77
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.62 E-value=5.8e-15 Score=125.67 Aligned_cols=133 Identities=20% Similarity=0.176 Sum_probs=104.2
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCC-CCC-CceEEEeccccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQ-FIP-PADAFLFKLVFH 187 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~-~~p-~~D~v~~~~vlh 187 (283)
.....+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|++..++|
T Consensus 118 ~~~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~i~~~~~~~ 195 (286)
T 3m70_A 118 IISPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYDFIVSTVVFM 195 (286)
T ss_dssp HSCSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCEEEEEECSSGG
T ss_pred ccCCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCccEEEEccchh
Confidence 446789999999999999999988 669999999 777776654 3389999999998 444 499999999999
Q ss_pred CCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCee
Q 023384 188 GLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHY 267 (283)
Q Consensus 188 ~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 267 (283)
++++++...+|++++++|+| ||.++++.....+....+ ......++.+++.++++. |+++
T Consensus 196 ~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~---------------~~~~~~~~~~~l~~~~~~--~~~~ 255 (286)
T 3m70_A 196 FLNRERVPSIIKNMKEHTNV---GGYNLIVAAMSTDDVPCP---------------LPFSFTFAENELKEYYKD--WEFL 255 (286)
T ss_dssp GSCGGGHHHHHHHHHHTEEE---EEEEEEEEEBCCSSSCCS---------------SCCSCCBCTTHHHHHTTT--SEEE
T ss_pred hCCHHHHHHHHHHHHHhcCC---CcEEEEEEecCCCCCCCC---------------CCccccCCHHHHHHHhcC--CEEE
Confidence 99999889999999999999 788887766554332211 011234567888888855 8887
Q ss_pred eEE
Q 023384 268 KIT 270 (283)
Q Consensus 268 ~~~ 270 (283)
+..
T Consensus 256 ~~~ 258 (286)
T 3m70_A 256 EYN 258 (286)
T ss_dssp EEE
T ss_pred EEE
Confidence 663
No 78
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.61 E-value=3.3e-14 Score=118.62 Aligned_cols=95 Identities=20% Similarity=0.292 Sum_probs=79.4
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCC-CCC-CceEEEec-cccc
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQ-FIP-PADAFLFK-LVFH 187 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~-~~p-~~D~v~~~-~vlh 187 (283)
....+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|++. ..+|
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~ 117 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFDAVTMFFSTIM 117 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCEEEEEECSSGGG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCccEEEEcCCchh
Confidence 45679999999999999999987 679999999 888877654 3479999999988 555 49999986 5667
Q ss_pred CCChhHHHHHHHHHHHhhccCCCCcEEEE
Q 023384 188 GLGDEDGLKILKKRRAAIASNGERGKVII 216 (283)
Q Consensus 188 ~~~d~~~~~iL~~~~~~L~p~~~gg~lli 216 (283)
+++.++..++|++++++|+| ||.+++
T Consensus 118 ~~~~~~~~~~l~~~~~~L~p---gG~li~ 143 (252)
T 1wzn_A 118 YFDEEDLRKLFSKVAEALKP---GGVFIT 143 (252)
T ss_dssp GSCHHHHHHHHHHHHHHEEE---EEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCC---CeEEEE
Confidence 77878889999999999999 677654
No 79
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.61 E-value=1.9e-15 Score=129.03 Aligned_cols=99 Identities=20% Similarity=0.198 Sum_probs=83.2
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEEcCCCC-C---CC--Cce
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----------ADNLKYIAGDMFQ-F---IP--PAD 178 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~rv~~~~~d~~~-~---~p--~~D 178 (283)
..+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..++.+..+|+.+ + ++ .||
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD 132 (293)
T 3thr_A 55 QHGCHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFD 132 (293)
T ss_dssp HTTCCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeE
Confidence 456689999999999999999998 449999999 777776642 2578899999887 5 44 499
Q ss_pred EEEec-ccccCCCh-----hHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 179 AFLFK-LVFHGLGD-----EDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 179 ~v~~~-~vlh~~~d-----~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
+|++. +++|++++ ++..++|++++++|+| ||.+++...
T Consensus 133 ~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~ 176 (293)
T 3thr_A 133 AVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRP---GGLLVIDHR 176 (293)
T ss_dssp EEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEE---EEEEEEEEE
T ss_pred EEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCC---CeEEEEEeC
Confidence 99998 89999998 7778999999999999 788877654
No 80
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.61 E-value=1.7e-15 Score=127.22 Aligned_cols=150 Identities=14% Similarity=0.088 Sum_probs=107.6
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---CC-------------------------------
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE---AD------------------------------- 161 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---~~------------------------------- 161 (283)
....+|||||||+|.++..+++..+ .+++++|+ +.+++.+++ ..
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 3457899999999999999888765 58999999 777776643 11
Q ss_pred -Ce-EEEEcCCCC-CC------CCceEEEecccccCCCh--hHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhh
Q 023384 162 -NL-KYIAGDMFQ-FI------PPADAFLFKLVFHGLGD--EDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHEL 230 (283)
Q Consensus 162 -rv-~~~~~d~~~-~~------p~~D~v~~~~vlh~~~d--~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~ 230 (283)
++ .++.+|+.+ +. ..||+|++..+||+.++ ++...+|++++++|+| ||.+++.+..... ...
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~Lkp---gG~li~~~~~~~~-~~~--- 206 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKP---GGFLVMVDALKSS-YYM--- 206 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEE---EEEEEEEEESSCC-EEE---
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCC---CcEEEEEecCCCc-eEE---
Confidence 27 899999987 32 24999999999995433 2567899999999999 7888887743221 000
Q ss_pred hhhhhhcccccccccCCccCCHHHHHHHHHHCCCCeeeEEEcCC----------cceEEEEeC
Q 023384 231 TETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKITPIFG----------MRFLIEIYP 283 (283)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~----------~~~~i~~~~ 283 (283)
..+. .......+.+++.++|+++||+++++...+. ...+++|+|
T Consensus 207 -----~~~~----~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~a~K 260 (265)
T 2i62_A 207 -----IGEQ----KFSSLPLGWETVRDAVEEAGYTIEQFEVISQNYSSTTSNNEGLFSLVGRK 260 (265)
T ss_dssp -----ETTE----EEECCCCCHHHHHHHHHHTTCEEEEEEEECCCCCTTTBCCCCEEEEEEEC
T ss_pred -----cCCc----cccccccCHHHHHHHHHHCCCEEEEEEEecccCCccccccceEEEEEecc
Confidence 0000 0112345889999999999999998875431 244667765
No 81
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.61 E-value=2e-15 Score=122.35 Aligned_cols=149 Identities=12% Similarity=0.047 Sum_probs=107.2
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCC-CCC--CceEEEecccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQ-FIP--PADAFLFKLVF 186 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~-~~p--~~D~v~~~~vl 186 (283)
.....+|||+|||+|..+..++.. ++.+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++..++
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTI 99 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCG
T ss_pred cCCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChH
Confidence 455689999999999986655544 5779999999 777777654 4679999999988 654 49999999999
Q ss_pred cCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccch--hhhhhhhhcccccccccCCccCCHHHHHHHHHHCCC
Q 023384 187 HGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEH--ELTETKFLFDIVMSVNATGKERTESEWAKLFFDACF 264 (283)
Q Consensus 187 h~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 264 (283)
|+++.++..++|++++++|+| ||.+++.+...++..... +... ..+.............++.+++.++++++||
T Consensus 100 ~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~ 175 (209)
T 2p8j_A 100 FHMRKNDVKEAIDEIKRVLKP---GGLACINFLTTKDERYNKGEKIGE-GEFLQLERGEKVIHSYVSLEEADKYFKDMKV 175 (209)
T ss_dssp GGSCHHHHHHHHHHHHHHEEE---EEEEEEEEEETTSTTTTCSEEEET-TEEEECC-CCCEEEEEECHHHHHHTTTTSEE
T ss_pred HhCCHHHHHHHHHHHHHHcCC---CcEEEEEEecccchhccchhhhcc-ccceeccCCCceeEEecCHHHHHHHHhhcCc
Confidence 999878888999999999999 788888887655432110 0000 0000000000011345689999999999998
Q ss_pred CeeeE
Q 023384 265 SHYKI 269 (283)
Q Consensus 265 ~~~~~ 269 (283)
...+.
T Consensus 176 ~~~~~ 180 (209)
T 2p8j_A 176 LFKED 180 (209)
T ss_dssp EEEEE
T ss_pred eeeee
Confidence 76654
No 82
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.60 E-value=4.9e-15 Score=126.57 Aligned_cols=153 Identities=12% Similarity=0.015 Sum_probs=108.1
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC-CC-C--CceEEEec
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ-FI-P--PADAFLFK 183 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~-~~-p--~~D~v~~~ 183 (283)
.....+|||||||+|.++..+++. +..+++++|+ +.+++.+++ ..++.++.+|+.+ ++ + .||+|++.
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQ 140 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEEC
Confidence 456689999999999999998776 5669999999 777776654 2478999999998 65 3 39999999
Q ss_pred ccccC--CChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCcc-------chhhhh------------hhhhcccccc
Q 023384 184 LVFHG--LGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEE-------EHELTE------------TKFLFDIVMS 242 (283)
Q Consensus 184 ~vlh~--~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~-------~~~~~~------------~~~~~~~~~~ 242 (283)
.++|+ .+.++...+|++++++|+| ||.+++..+....... ...... ....+.+...
T Consensus 141 ~~l~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~ 217 (298)
T 1ri5_A 141 FSFHYAFSTSESLDIAQRNIARHLRP---GGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLL 217 (298)
T ss_dssp SCGGGGGSSHHHHHHHHHHHHHTEEE---EEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEET
T ss_pred chhhhhcCCHHHHHHHHHHHHHhcCC---CCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEc
Confidence 99998 5677788999999999999 7888887654311000 000000 0000000000
Q ss_pred c---ccCCccCCHHHHHHHHHHCCCCeeeEEEc
Q 023384 243 V---NATGKERTESEWAKLFFDACFSHYKITPI 272 (283)
Q Consensus 243 ~---~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 272 (283)
. ......++.++++++++++||+++++...
T Consensus 218 ~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~ 250 (298)
T 1ri5_A 218 DSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGF 250 (298)
T ss_dssp TSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEH
T ss_pred hhhcCCcccccCHHHHHHHHHHcCCEEEEecCH
Confidence 0 01124568999999999999999988664
No 83
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.60 E-value=8.6e-15 Score=118.46 Aligned_cols=131 Identities=12% Similarity=0.069 Sum_probs=105.8
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCCCCC-CceEEEeccccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQFIP-PADAFLFKLVFH 187 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~~~p-~~D~v~~~~vlh 187 (283)
.....+|||||||+|.++..+++ .+..+++++|+ +.+++.+++ ..+++++.+|+.+..+ .||+|++...+|
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~~ 136 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHK-LGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAE 136 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCHH
T ss_pred ccCCCEEEEECCCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcHH
Confidence 45668999999999999999776 57789999999 777776654 2349999999988444 599999988776
Q ss_pred CCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCee
Q 023384 188 GLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHY 267 (283)
Q Consensus 188 ~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 267 (283)
+ ...+++++++.|+| ||++++.+.... +.+++.++++++||+.+
T Consensus 137 ~-----~~~~l~~~~~~L~~---gG~l~~~~~~~~----------------------------~~~~~~~~~~~~Gf~~~ 180 (205)
T 3grz_A 137 I-----LLDLIPQLDSHLNE---DGQVIFSGIDYL----------------------------QLPKIEQALAENSFQID 180 (205)
T ss_dssp H-----HHHHGGGSGGGEEE---EEEEEEEEEEGG----------------------------GHHHHHHHHHHTTEEEE
T ss_pred H-----HHHHHHHHHHhcCC---CCEEEEEecCcc----------------------------cHHHHHHHHHHcCCceE
Confidence 4 46889999999999 788887553221 36788999999999999
Q ss_pred eEEEcCCcceEEEEeC
Q 023384 268 KITPIFGMRFLIEIYP 283 (283)
Q Consensus 268 ~~~~~~~~~~~i~~~~ 283 (283)
++.....+.+++.-+|
T Consensus 181 ~~~~~~~w~~~~~~~~ 196 (205)
T 3grz_A 181 LKMRAGRWIGLAISRK 196 (205)
T ss_dssp EEEEETTEEEEEEEEC
T ss_pred EeeccCCEEEEEEecc
Confidence 9988888888887654
No 84
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.60 E-value=8.1e-15 Score=125.27 Aligned_cols=140 Identities=14% Similarity=0.154 Sum_probs=94.7
Q ss_pred CCCeEEEEcCCccHHHH----HHHHHCCCCeE--EEeec-hHHHhcCCC-------CCCeEE--EEcCCCC-C------C
Q 023384 118 GLGSLVDVGGGNGSLSR----IISEAFPGIKC--TVLDL-PHVVANLPE-------ADNLKY--IAGDMFQ-F------I 174 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~----~l~~~~p~~~~--~~~D~-~~~~~~a~~-------~~rv~~--~~~d~~~-~------~ 174 (283)
...+|||||||+|.++. .++.++|+.++ +++|. +++++.+++ ..++++ ..++..+ + +
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 34689999999997654 44566788854 99999 777776543 134544 4555433 2 2
Q ss_pred C--CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhccc-ccccc-cCCccC
Q 023384 175 P--PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDI-VMSVN-ATGKER 250 (283)
Q Consensus 175 p--~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~ 250 (283)
+ .||+|++.++||+++|.. +.|++++++||| ||++++.+... +.... ..+... ..+.. .....+
T Consensus 132 ~~~~fD~V~~~~~l~~~~d~~--~~l~~~~r~Lkp---gG~l~i~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~ 199 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYVKDIP--ATLKFFHSLLGT---NAKMLIIVVSG-SSGWD------KLWKKYGSRFPQDDLCQYI 199 (292)
T ss_dssp CCCCEEEEEEESCGGGCSCHH--HHHHHHHHTEEE---EEEEEEEEECT-TSHHH------HHHHHHGGGSCCCTTCCCC
T ss_pred CCCceeEEEEeeeeeecCCHH--HHHHHHHHHcCC---CcEEEEEEecC-CccHH------HHHHHHHHhccCCCcccCC
Confidence 2 499999999999999875 779999999999 79998886432 11100 001000 00000 012456
Q ss_pred CHHHHHHHHHHCCCCeeeE
Q 023384 251 TESEWAKLFFDACFSHYKI 269 (283)
Q Consensus 251 t~~e~~~ll~~aGf~~~~~ 269 (283)
+.++|.++|+++||++.+.
T Consensus 200 ~~~~~~~~l~~aGf~~~~~ 218 (292)
T 2aot_A 200 TSDDLTQMLDNLGLKYECY 218 (292)
T ss_dssp CHHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHHCCCceEEE
Confidence 8999999999999998764
No 85
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.58 E-value=3.3e-15 Score=125.80 Aligned_cols=150 Identities=14% Similarity=0.032 Sum_probs=103.0
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----C------------------------------
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----A------------------------------ 160 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~------------------------------ 160 (283)
....+|||||||+|.++..+++.. ..+++++|+ +.+++.+++ .
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~-~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDS-FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGT-EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhh-hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 345789999999998877655442 126999999 777775442 0
Q ss_pred CCeE-EEEcCCCCC--C-----CCceEEEecccccCCC--hhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhh
Q 023384 161 DNLK-YIAGDMFQF--I-----PPADAFLFKLVFHGLG--DEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHEL 230 (283)
Q Consensus 161 ~rv~-~~~~d~~~~--~-----p~~D~v~~~~vlh~~~--d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~ 230 (283)
.++. ++.+|+.+. + +.||+|++..+||+.. .++..++|++++++||| ||.+++.+...... ..
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKP---GG~li~~~~~~~~~-~~--- 205 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKP---GGHLVTTVTLRLPS-YM--- 205 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEE---EEEEEEEEESSCCE-EE---
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCC---CcEEEEEEeecCcc-ce---
Confidence 1233 889999872 2 3599999999999852 35667899999999999 78888876432110 00
Q ss_pred hhhhhhcccccccccCCccCCHHHHHHHHHHCCCCeeeEEEcC----------CcceEEEEeC
Q 023384 231 TETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKITPIF----------GMRFLIEIYP 283 (283)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~----------~~~~~i~~~~ 283 (283)
. . .. ......++.+++.++|+++||+++++...+ ....++.|+|
T Consensus 206 -~-g-~~------~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~~~~~~~~~~~~~~~~~~a~K 259 (263)
T 2a14_A 206 -V-G-KR------EFSCVALEKGEVEQAVLDAGFDIEQLLHSPQSYSVTNAANNGVCCIVARK 259 (263)
T ss_dssp -E-T-TE------EEECCCCCHHHHHHHHHHTTEEEEEEEEECCCCCTTTCCCCCEEEEEEEE
T ss_pred -e-C-Ce------EeeccccCHHHHHHHHHHCCCEEEEEeecccccccccCCCCceEEEEEEe
Confidence 0 0 00 011234589999999999999998876542 1345667765
No 86
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.58 E-value=1.2e-14 Score=124.50 Aligned_cols=141 Identities=15% Similarity=0.116 Sum_probs=100.0
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC--------CCCeEEEEcCCCC-CC--------CCc
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAF-PGIKCTVLDL-PHVVANLPE--------ADNLKYIAGDMFQ-FI--------PPA 177 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~--------~~rv~~~~~d~~~-~~--------p~~ 177 (283)
....+|||||||+|.++..+++.+ +..+++++|+ +.+++.+++ ..+++++.+|+.+ ++ ..|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 467899999999999999999987 8999999999 878776653 4689999999988 43 249
Q ss_pred eEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhccccccc-ccCCcc--CCHHH
Q 023384 178 DAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSV-NATGKE--RTESE 254 (283)
Q Consensus 178 D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~t~~e 254 (283)
|+|++..++|++ + ..++|++++++|+| ||.+++.+...+.....+... ..+..+..-. ..+... ...+.
T Consensus 115 D~V~~~~~l~~~-~--~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~w~~p~~~~ 186 (299)
T 3g5t_A 115 DMITAVECAHWF-D--FEKFQRSAYANLRK---DGTIAIWGYADPIFPDYPEFD--DLMIEVPYGKQGLGPYWEQPGRSR 186 (299)
T ss_dssp EEEEEESCGGGS-C--HHHHHHHHHHHEEE---EEEEEEEEEEEEECTTCGGGT--THHHHHHHCTTTTGGGSCTTHHHH
T ss_pred eEEeHhhHHHHh-C--HHHHHHHHHHhcCC---CcEEEEEecCCccccCcHHHH--HHHHHhccCcccccchhhchhhHH
Confidence 999999999999 4 45889999999999 799888554332211111000 0011111000 001111 34667
Q ss_pred HHHHHHHCCCC
Q 023384 255 WAKLFFDACFS 265 (283)
Q Consensus 255 ~~~ll~~aGf~ 265 (283)
++++++++||.
T Consensus 187 ~~~~l~~~gfp 197 (299)
T 3g5t_A 187 LRNMLKDSHLD 197 (299)
T ss_dssp HHTTTTTCCCC
T ss_pred HHHhhhccCCC
Confidence 79999999994
No 87
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.58 E-value=7.6e-14 Score=109.66 Aligned_cols=126 Identities=12% Similarity=0.147 Sum_probs=100.1
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCCCC--CceEEEecccccCCChh-
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQFIP--PADAFLFKLVFHGLGDE- 192 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~~p--~~D~v~~~~vlh~~~d~- 192 (283)
....+|||||||+|.++..+++.. +++++|+ +.+++. ..+++++.+|+.++.+ .||+|+++..+|..++.
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~---~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~~~~~~~ 95 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES---HRGGNLVRADLLCSINQESVDVVVFNPPYVPDTDDP 95 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT---CSSSCEEECSTTTTBCGGGCSEEEECCCCBTTCCCT
T ss_pred CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc---ccCCeEEECChhhhcccCCCCEEEECCCCccCCccc
Confidence 445799999999999999999986 9999999 777777 5679999999998655 49999999998865554
Q ss_pred ------HHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCe
Q 023384 193 ------DGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSH 266 (283)
Q Consensus 193 ------~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 266 (283)
+...+++++.+.+ | ||++++.+... .+.+++.++++++||+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~l-p---gG~l~~~~~~~----------------------------~~~~~l~~~l~~~gf~~ 143 (170)
T 3q87_B 96 IIGGGYLGREVIDRFVDAV-T---VGMLYLLVIEA----------------------------NRPKEVLARLEERGYGT 143 (170)
T ss_dssp TTBCCGGGCHHHHHHHHHC-C---SSEEEEEEEGG----------------------------GCHHHHHHHHHHTTCEE
T ss_pred cccCCcchHHHHHHHHhhC-C---CCEEEEEEecC----------------------------CCHHHHHHHHHHCCCcE
Confidence 4467889999999 8 79988876321 14678899999999999
Q ss_pred eeEEEc-CCcceEEE
Q 023384 267 YKITPI-FGMRFLIE 280 (283)
Q Consensus 267 ~~~~~~-~~~~~~i~ 280 (283)
.++... .+...++.
T Consensus 144 ~~~~~~~~~~e~~~~ 158 (170)
T 3q87_B 144 RILKVRKILGETVYI 158 (170)
T ss_dssp EEEEEEECSSSEEEE
T ss_pred EEEEeeccCCceEEE
Confidence 887665 34444443
No 88
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.58 E-value=1.3e-14 Score=130.03 Aligned_cols=151 Identities=13% Similarity=0.064 Sum_probs=105.5
Q ss_pred hHHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCC------CC-
Q 023384 103 LTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQ------FI- 174 (283)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~------~~- 174 (283)
....+++ .+. .....+|||||||+|.++..+++. ..+++++|+ +.+++.+++. .+......+.. ++
T Consensus 95 ~~~~l~~-~~~--~~~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~l~~~ 168 (416)
T 4e2x_A 95 LARDFLA-TEL--TGPDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK-GIRVRTDFFEKATADDVRRT 168 (416)
T ss_dssp HHHHHHH-TTT--CSSSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT-TCCEECSCCSHHHHHHHHHH
T ss_pred HHHHHHH-HhC--CCCCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc-CCCcceeeechhhHhhcccC
Confidence 3345555 554 566789999999999999999987 459999999 7788777652 33333322221 12
Q ss_pred -CCceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHH
Q 023384 175 -PPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTES 253 (283)
Q Consensus 175 -p~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 253 (283)
..||+|++.++|||+++. ..+|++++++|+| ||.+++..+...... . ...+..........++.+
T Consensus 169 ~~~fD~I~~~~vl~h~~d~--~~~l~~~~r~Lkp---gG~l~i~~~~~~~~~------~---~~~~~~~~~~~~~~~s~~ 234 (416)
T 4e2x_A 169 EGPANVIYAANTLCHIPYV--QSVLEGVDALLAP---DGVFVFEDPYLGDIV------A---KTSFDQIFDEHFFLFSAT 234 (416)
T ss_dssp HCCEEEEEEESCGGGCTTH--HHHHHHHHHHEEE---EEEEEEEEECHHHHH------H---HTCGGGCSTTCCEECCHH
T ss_pred CCCEEEEEECChHHhcCCH--HHHHHHHHHHcCC---CeEEEEEeCChHHhh------h---hcchhhhhhhhhhcCCHH
Confidence 249999999999999875 4889999999999 788887654332110 0 011111111233457999
Q ss_pred HHHHHHHHCCCCeeeEEEcC
Q 023384 254 EWAKLFFDACFSHYKITPIF 273 (283)
Q Consensus 254 e~~~ll~~aGf~~~~~~~~~ 273 (283)
++.++++++||+++++...+
T Consensus 235 ~l~~ll~~aGf~~~~~~~~~ 254 (416)
T 4e2x_A 235 SVQGMAQRCGFELVDVQRLP 254 (416)
T ss_dssp HHHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHcCCEEEEEEEcc
Confidence 99999999999999987764
No 89
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.55 E-value=3.2e-14 Score=117.31 Aligned_cols=141 Identities=13% Similarity=0.150 Sum_probs=101.1
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcC----CCCCCeEEEEcCCCCC-----CC-CceEEEecc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANL----PEADNLKYIAGDMFQF-----IP-PADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a----~~~~rv~~~~~d~~~~-----~p-~~D~v~~~~ 184 (283)
+.+..+|||||||+|.++..+++.+|..+++++|+ +.+++.+ +...++.++.+|+.++ ++ .||+|+
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~--- 148 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIY--- 148 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEE---
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEE---
Confidence 45668999999999999999999998889999999 7776543 3357899999999862 22 499998
Q ss_pred cccCCChh-HHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCC
Q 023384 185 VFHGLGDE-DGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAC 263 (283)
Q Consensus 185 vlh~~~d~-~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aG 263 (283)
|++++. ....+|+++++.|+| ||.+++. .........++. .....+++. +|+++|
T Consensus 149 --~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~-~~~~~~~~~~~~-----------------~~~~~~~l~-~l~~~G 204 (230)
T 1fbn_A 149 --EDVAQPNQAEILIKNAKWFLKK---GGYGMIA-IKARSIDVTKDP-----------------KEIFKEQKE-ILEAGG 204 (230)
T ss_dssp --ECCCSTTHHHHHHHHHHHHEEE---EEEEEEE-EEGGGTCSSSCH-----------------HHHHHHHHH-HHHHHT
T ss_pred --EecCChhHHHHHHHHHHHhCCC---CcEEEEE-EecCCCCCCCCH-----------------HHhhHHHHH-HHHHCC
Confidence 555543 345679999999999 7888886 221111111000 011246787 999999
Q ss_pred CCeeeEEEcCCc---ceEEEEeC
Q 023384 264 FSHYKITPIFGM---RFLIEIYP 283 (283)
Q Consensus 264 f~~~~~~~~~~~---~~~i~~~~ 283 (283)
|+.+++.....+ +.+++++|
T Consensus 205 f~~~~~~~~~~~~~~~~~v~~~k 227 (230)
T 1fbn_A 205 FKIVDEVDIEPFEKDHVMFVGIW 227 (230)
T ss_dssp EEEEEEEECTTTSTTEEEEEEEE
T ss_pred CEEEEEEccCCCccceEEEEEEe
Confidence 999998877544 67777754
No 90
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.55 E-value=1e-13 Score=111.96 Aligned_cols=123 Identities=15% Similarity=0.205 Sum_probs=97.9
Q ss_pred HHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCCCC---CC
Q 023384 107 VVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQFI---PP 176 (283)
Q Consensus 107 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~~~---p~ 176 (283)
++. .++ .....+|||||||+|.++..+++..|..+++++|+ +++++.+++ .++++++.+|+.+.. +.
T Consensus 32 ~l~-~l~--~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 108 (204)
T 3e05_A 32 TLS-KLR--LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPD 108 (204)
T ss_dssp HHH-HTT--CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCC
T ss_pred HHH-HcC--CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCC
Confidence 344 444 56678999999999999999999999999999999 888877764 368999999997732 45
Q ss_pred ceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHH
Q 023384 177 ADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWA 256 (283)
Q Consensus 177 ~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~ 256 (283)
||+|++...++ +..++++++.+.|+| ||++++...... +.+++.
T Consensus 109 ~D~i~~~~~~~-----~~~~~l~~~~~~Lkp---gG~l~~~~~~~~----------------------------~~~~~~ 152 (204)
T 3e05_A 109 PDRVFIGGSGG-----MLEEIIDAVDRRLKS---EGVIVLNAVTLD----------------------------TLTKAV 152 (204)
T ss_dssp CSEEEESCCTT-----CHHHHHHHHHHHCCT---TCEEEEEECBHH----------------------------HHHHHH
T ss_pred CCEEEECCCCc-----CHHHHHHHHHHhcCC---CeEEEEEecccc----------------------------cHHHHH
Confidence 99999988776 345889999999999 788887553210 356788
Q ss_pred HHHHHCCCCeeeE
Q 023384 257 KLFFDACFSHYKI 269 (283)
Q Consensus 257 ~ll~~aGf~~~~~ 269 (283)
++++++|| .+++
T Consensus 153 ~~l~~~g~-~~~~ 164 (204)
T 3e05_A 153 EFLEDHGY-MVEV 164 (204)
T ss_dssp HHHHHTTC-EEEE
T ss_pred HHHHHCCC-ceeE
Confidence 89999998 4443
No 91
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.54 E-value=5.8e-14 Score=113.17 Aligned_cols=135 Identities=9% Similarity=0.048 Sum_probs=101.2
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCC-CCC--CceEEEecccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQ-FIP--PADAFLFKLVF 186 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~-~~p--~~D~v~~~~vl 186 (283)
++.. +|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..++.++.+|+.+ +++ .||+|++. +
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~--~ 102 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSI--F 102 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEE--C
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEE--h
Confidence 3444 9999999999999999887 569999999 777777664 3489999999988 655 49999984 3
Q ss_pred cCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCe
Q 023384 187 HGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSH 266 (283)
Q Consensus 187 h~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 266 (283)
++++.++...+|++++++|+| ||.+++.+......... .... ......++.+++.++++ ||++
T Consensus 103 ~~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~---------~~~~---~~~~~~~~~~~l~~~l~--Gf~v 165 (202)
T 2kw5_A 103 CHLPSSLRQQLYPKVYQGLKP---GGVFILEGFAPEQLQYN---------TGGP---KDLDLLPKLETLQSELP--SLNW 165 (202)
T ss_dssp CCCCHHHHHHHHHHHHTTCCS---SEEEEEEEECTTTGGGT---------SCCS---SSGGGCCCHHHHHHHCS--SSCE
T ss_pred hcCCHHHHHHHHHHHHHhcCC---CcEEEEEEeccccccCC---------CCCC---CcceeecCHHHHHHHhc--CceE
Confidence 456777788999999999999 78888877654322100 0000 01124579999999999 9999
Q ss_pred eeEEEc
Q 023384 267 YKITPI 272 (283)
Q Consensus 267 ~~~~~~ 272 (283)
+++...
T Consensus 166 ~~~~~~ 171 (202)
T 2kw5_A 166 LIANNL 171 (202)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 886543
No 92
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.54 E-value=9.4e-14 Score=116.13 Aligned_cols=142 Identities=19% Similarity=0.221 Sum_probs=100.6
Q ss_pred CCCCeEEEEcCCc--cHHHHHH-HHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCCC-C----C----Cc
Q 023384 117 EGLGSLVDVGGGN--GSLSRII-SEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQF-I----P----PA 177 (283)
Q Consensus 117 ~~~~~vlDvGgG~--G~~~~~l-~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~~-~----p----~~ 177 (283)
.+..+|||||||+ +..+..+ .+..|+.+++++|. |.+++.+++ ..++.|+.+|+.++ . | .+
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~ 156 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTL 156 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTC
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhccccccccc
Confidence 3567999999997 3344444 45689999999999 899988875 24799999999873 1 1 24
Q ss_pred e-----EEEecccccCCChhH-HHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCC
Q 023384 178 D-----AFLFKLVFHGLGDED-GLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERT 251 (283)
Q Consensus 178 D-----~v~~~~vlh~~~d~~-~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 251 (283)
| ++++..+||+++|++ ...+|++++++|+| ||.+++.+...+..... . ....+...........||
T Consensus 157 D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~P---GG~Lvls~~~~d~~p~~--~---~~~~~~~~~~g~p~~~rs 228 (277)
T 3giw_A 157 DLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPS---GSYLAMSIGTAEFAPQE--V---GRVAREYAARNMPMRLRT 228 (277)
T ss_dssp CTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCT---TCEEEEEEECCTTSHHH--H---HHHHHHHHHTTCCCCCCC
T ss_pred CcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCC---CcEEEEEeccCCCCHHH--H---HHHHHHHHhcCCCCccCC
Confidence 5 688999999999976 57899999999999 78888877655422111 0 011111111112345689
Q ss_pred HHHHHHHHHHCCCCeee
Q 023384 252 ESEWAKLFFDACFSHYK 268 (283)
Q Consensus 252 ~~e~~~ll~~aGf~~~~ 268 (283)
.+|+.++|. ||++++
T Consensus 229 ~~ei~~~f~--Glelve 243 (277)
T 3giw_A 229 HAEAEEFFE--GLELVE 243 (277)
T ss_dssp HHHHHHTTT--TSEECT
T ss_pred HHHHHHHhC--CCcccC
Confidence 999999994 998765
No 93
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.54 E-value=2.1e-14 Score=122.47 Aligned_cols=138 Identities=14% Similarity=0.137 Sum_probs=95.7
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--CC---------------------------------
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE--AD--------------------------------- 161 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~~--------------------------------- 161 (283)
...+|||||||+|.++. ++...+..+++++|+ +.+++.+++ ..
T Consensus 71 ~~~~vLDiGcG~G~~~~-l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQL-LSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGG-TTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHH-HhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 55799999999999543 444445669999999 777765432 00
Q ss_pred -CeEEEEcCCCC--C-----CC--CceEEEecccccCCChh--HHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchh
Q 023384 162 -NLKYIAGDMFQ--F-----IP--PADAFLFKLVFHGLGDE--DGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHE 229 (283)
Q Consensus 162 -rv~~~~~d~~~--~-----~p--~~D~v~~~~vlh~~~d~--~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~ 229 (283)
.+.++.+|+.+ + ++ .||+|++..+||+..++ +..++|++++++||| ||++++.+..... ...
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~Lkp---GG~l~~~~~~~~~-~~~-- 223 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRP---GGHLLLIGALEES-WYL-- 223 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEE---EEEEEEEEEESCC-EEE--
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCC---CCEEEEEEecCcc-eEE--
Confidence 14567778876 2 22 29999999999985543 567899999999999 7888887633211 000
Q ss_pred hhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCeeeEEEc
Q 023384 230 LTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKITPI 272 (283)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 272 (283)
..+. ......++.++|.++|+++||+++++...
T Consensus 224 ------~~~~----~~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 256 (289)
T 2g72_A 224 ------AGEA----RLTVVPVSEEEVREALVRSGYKVRDLRTY 256 (289)
T ss_dssp ------ETTE----EEECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred ------cCCe----eeeeccCCHHHHHHHHHHcCCeEEEeeEe
Confidence 0000 01123468999999999999999887543
No 94
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.53 E-value=2.1e-13 Score=115.56 Aligned_cols=135 Identities=15% Similarity=0.143 Sum_probs=104.8
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCCCCC--CceEEEecc---
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQFIP--PADAFLFKL--- 184 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~~~p--~~D~v~~~~--- 184 (283)
....+|||||||+|..+..+++.+|+.+++++|+ +.+++.+++ ..+++++.+|++++.+ .||+|++.-
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~fD~Iv~npPy~ 187 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMIVSNPPYI 187 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTTCCEEEEEECCCCB
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcccCCccEEEECCCCC
Confidence 3457999999999999999999999999999999 777776654 2479999999998542 599999973
Q ss_pred ----------cccCCCh----------hHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccc
Q 023384 185 ----------VFHGLGD----------EDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVN 244 (283)
Q Consensus 185 ----------vlh~~~d----------~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (283)
++++.+. +....+++++.+.|+| ||.+++...
T Consensus 188 ~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~Lkp---gG~l~~~~~------------------------- 239 (276)
T 2b3t_A 188 DEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVS---GGFLLLEHG------------------------- 239 (276)
T ss_dssp CTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEE---EEEEEEECC-------------------------
T ss_pred CccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCC---CCEEEEEEC-------------------------
Confidence 4433331 3457899999999999 677666310
Q ss_pred cCCccCCHHHHHHHHHHCCCCeeeEEE-cCCcceEEEEeC
Q 023384 245 ATGKERTESEWAKLFFDACFSHYKITP-IFGMRFLIEIYP 283 (283)
Q Consensus 245 ~~~~~~t~~e~~~ll~~aGf~~~~~~~-~~~~~~~i~~~~ 283 (283)
..+.+++.++++++||+.+++.. ..+...++.+++
T Consensus 240 ----~~~~~~~~~~l~~~Gf~~v~~~~d~~g~~r~~~~~~ 275 (276)
T 2b3t_A 240 ----WQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRY 275 (276)
T ss_dssp ----SSCHHHHHHHHHHTTCTTCCEEECTTSSEEEEEEEC
T ss_pred ----chHHHHHHHHHHHCCCcEEEEEecCCCCCcEEEEEE
Confidence 11467899999999999888765 456677777764
No 95
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.52 E-value=1.1e-13 Score=112.25 Aligned_cols=136 Identities=14% Similarity=0.046 Sum_probs=97.1
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCC-eEEEeec-hHHHhcCCC-CCCeEEEEcCCCC-CCC--CceEEEecccccCCC
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGI-KCTVLDL-PHVVANLPE-ADNLKYIAGDMFQ-FIP--PADAFLFKLVFHGLG 190 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~-~~p--~~D~v~~~~vlh~~~ 190 (283)
....+|||||||+|.++..+ .. +++++|+ +.+++.+++ ..++.++.+|+.+ +++ .||+|++..++|+++
T Consensus 35 ~~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 109 (211)
T 2gs9_A 35 PPGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVE 109 (211)
T ss_dssp CCCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCS
T ss_pred CCCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcC
Confidence 36689999999999999877 45 8999999 777777665 4689999999988 655 499999999999998
Q ss_pred hhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCeeeEE
Q 023384 191 DEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKIT 270 (283)
Q Consensus 191 d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 270 (283)
+.. ++|++++++|+| ||.+++.+...... ... ......... .......+.++.++++++|+ | ++++.
T Consensus 110 ~~~--~~l~~~~~~L~p---gG~l~i~~~~~~~~-~~~-~~~~~~~~~--~~~~~~~~~~s~~~l~~~l~--G--~~~~~ 176 (211)
T 2gs9_A 110 DVE--RVLLEARRVLRP---GGALVVGVLEALSP-WAA-LYRRLGEKG--VLPWAQARFLAREDLKALLG--P--PEAEG 176 (211)
T ss_dssp CHH--HHHHHHHHHEEE---EEEEEEEEECTTSH-HHH-HHHHHHHTT--CTTGGGCCCCCHHHHHHHHC--S--CSEEE
T ss_pred CHH--HHHHHHHHHcCC---CCEEEEEecCCcCc-HHH-HHHHHhhcc--CccccccccCCHHHHHHHhc--C--cceeE
Confidence 754 889999999999 78888877543221 000 000000000 00001245679999999998 7 44443
No 96
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.52 E-value=7.9e-14 Score=113.82 Aligned_cols=142 Identities=12% Similarity=0.069 Sum_probs=93.5
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhc----CCC------CCCeEEEEcCCCC-CCCC-ceEEEe
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVAN----LPE------ADNLKYIAGDMFQ-FIPP-ADAFLF 182 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~----a~~------~~rv~~~~~d~~~-~~p~-~D~v~~ 182 (283)
.....+|||||||+|.++..+++.+|+.+++++|+ +.+++. +++ ..+++++.+|+.+ +++. .|.|++
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~d~v~~ 104 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGVGELHV 104 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCEEEEEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCCCEEEE
Confidence 55668999999999999999999999999999999 765553 221 3589999999998 6542 366652
Q ss_pred cc---cc--cCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHH
Q 023384 183 KL---VF--HGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAK 257 (283)
Q Consensus 183 ~~---vl--h~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ 257 (283)
.. .+ |+.++. ..+|++++++||| ||++++...........+ ....+. .....+..+++.+
T Consensus 105 ~~~~~~~~~~~~~~~--~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~------~~~~~~----~~~~~~~~~~l~~ 169 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSS--PEMLRGMAAVCRP---GASFLVALNLHAWRPSVP------EVGEHP----EPTPDSADEWLAP 169 (218)
T ss_dssp ESCCHHHHHHHHTSS--SHHHHHHHHTEEE---EEEEEEEEEGGGBTTBCG------GGTTCC----CCCHHHHHHHHHH
T ss_pred EccchhhhhhhhccH--HHHHHHHHHHcCC---CcEEEEEecccccccccc------ccccCC----ccchHHHHHHHHH
Confidence 22 22 234443 4789999999999 788777322111000000 000000 0011223456888
Q ss_pred HHHHCCCCeeeEEEc
Q 023384 258 LFFDACFSHYKITPI 272 (283)
Q Consensus 258 ll~~aGf~~~~~~~~ 272 (283)
+++++||++.++...
T Consensus 170 ~l~~aGf~i~~~~~~ 184 (218)
T 3mq2_A 170 RYAEAGWKLADCRYL 184 (218)
T ss_dssp HHHHTTEEEEEEEEE
T ss_pred HHHHcCCCceeeecc
Confidence 999999999887654
No 97
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.49 E-value=4.8e-13 Score=106.59 Aligned_cols=133 Identities=14% Similarity=0.262 Sum_probs=102.2
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CC--CeEEEEcCCCCCCC--CceEEEecc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------AD--NLKYIAGDMFQFIP--PADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~--rv~~~~~d~~~~~p--~~D~v~~~~ 184 (283)
.....+|||+|||+|.++..+++. ..+++++|+ +.+++.+++ .. |++++.+|+.++.+ .||+|++..
T Consensus 50 ~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~ 127 (194)
T 1dus_A 50 VDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDRKYNKIITNP 127 (194)
T ss_dssp CCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTSCEEEEEECC
T ss_pred cCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccCCceEEEECC
Confidence 456689999999999999999988 779999999 777766654 22 49999999988543 499999988
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCC
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACF 264 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 264 (283)
.+|+ ..+....+++++++.|+| ||.+++...... ...++.+.+++. |
T Consensus 128 ~~~~-~~~~~~~~l~~~~~~L~~---gG~l~~~~~~~~----------------------------~~~~~~~~l~~~-~ 174 (194)
T 1dus_A 128 PIRA-GKEVLHRIIEEGKELLKD---NGEIWVVIQTKQ----------------------------GAKSLAKYMKDV-F 174 (194)
T ss_dssp CSTT-CHHHHHHHHHHHHHHEEE---EEEEEEEEESTH----------------------------HHHHHHHHHHHH-H
T ss_pred Cccc-chhHHHHHHHHHHHHcCC---CCEEEEEECCCC----------------------------ChHHHHHHHHHH-h
Confidence 8874 455677899999999999 788887764220 124577778777 7
Q ss_pred CeeeEEEcCCcceEEEEeC
Q 023384 265 SHYKITPIFGMRFLIEIYP 283 (283)
Q Consensus 265 ~~~~~~~~~~~~~~i~~~~ 283 (283)
..+++........++.++|
T Consensus 175 ~~~~~~~~~~~~~~~~~~k 193 (194)
T 1dus_A 175 GNVETVTIKGGYRVLKSKK 193 (194)
T ss_dssp SCCEEEEEETTEEEEEEEC
T ss_pred cceEEEecCCcEEEEEEee
Confidence 7777776655566676665
No 98
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.49 E-value=9.8e-14 Score=113.02 Aligned_cols=99 Identities=15% Similarity=0.237 Sum_probs=82.8
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEEcCCCC-CCC-CceEEEecccccC
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----ADNLKYIAGDMFQ-FIP-PADAFLFKLVFHG 188 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~rv~~~~~d~~~-~~p-~~D~v~~~~vlh~ 188 (283)
.....+|||||||+|.++..+++.. .+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|++..++|+
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~ 126 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVVAEVLYY 126 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEEEEESCGGG
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEEEEccHHHh
Confidence 3455799999999999999999885 58999999 777776654 4589999999998 433 4999999999999
Q ss_pred CCh-hHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 189 LGD-EDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 189 ~~d-~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
+++ +...++|++++++|+| ||.+++...
T Consensus 127 ~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~ 155 (216)
T 3ofk_A 127 LEDMTQMRTAIDNMVKMLAP---GGHLVFGSA 155 (216)
T ss_dssp SSSHHHHHHHHHHHHHTEEE---EEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHcCC---CCEEEEEec
Confidence 997 5566899999999999 788877664
No 99
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.48 E-value=5.1e-14 Score=115.72 Aligned_cols=145 Identities=9% Similarity=0.020 Sum_probs=90.6
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeech-HHH-hc---CCC------CCCeEEEEcCCCC-CCCCceEEEecc
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLP-HVV-AN---LPE------ADNLKYIAGDMFQ-FIPPADAFLFKL 184 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~-~~~-~~---a~~------~~rv~~~~~d~~~-~~p~~D~v~~~~ 184 (283)
....+|||||||+|.++..++++.|+.+++++|+. +.+ +. +++ ..++.++.+|..+ +...+|+|.+..
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 45579999999999999999999999999999993 554 33 343 3579999999887 322245555444
Q ss_pred cccCCChh------HHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHH
Q 023384 185 VFHGLGDE------DGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKL 258 (283)
Q Consensus 185 vlh~~~d~------~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l 258 (283)
+.+.|+.. +...+|++++++||| ||++++....... ....++ ....... ........+++.++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~r~Lkp---GG~l~i~~~~~~~-~~~~~~----~~~~~~~---~~~~~~~~~el~~~ 171 (225)
T 3p2e_A 103 ILFPWGTLLEYVIKPNRDILSNVADLAKK---EAHFEFVTTYSDS-YEEAEI----KKRGLPL---LSKAYFLSEQYKAE 171 (225)
T ss_dssp EESCCHHHHHHHHTTCHHHHHHHHTTEEE---EEEEEEEECCCC----------------------CCHHHHHSHHHHHH
T ss_pred EeCCCcHHhhhhhcchHHHHHHHHHhcCC---CcEEEEEEecccc-chhchh----hhcCCCC---CChhhcchHHHHHH
Confidence 44434331 113679999999999 7888884433322 111000 0000000 00011122359999
Q ss_pred HHHCCCCeeeEEEc
Q 023384 259 FFDACFSHYKITPI 272 (283)
Q Consensus 259 l~~aGf~~~~~~~~ 272 (283)
++++||++.++...
T Consensus 172 l~~aGf~v~~~~~~ 185 (225)
T 3p2e_A 172 LSNSGFRIDDVKEL 185 (225)
T ss_dssp HHHHTCEEEEEEEE
T ss_pred HHHcCCCeeeeeec
Confidence 99999998877654
No 100
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.48 E-value=3.6e-14 Score=115.11 Aligned_cols=135 Identities=19% Similarity=0.242 Sum_probs=89.9
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCCCC-------CCceEEEec
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQFI-------PPADAFLFK 183 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~~~-------p~~D~v~~~ 183 (283)
....+|||+|||+|.++..+++.+|+.+++++|+ +.+++.+++ ..+++++.+|+.+++ ..||+|++.
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~n 108 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVSN 108 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEEC
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEEC
Confidence 5668999999999999999999999999999999 888887775 126888999988732 359999996
Q ss_pred cccc------CCChhHH------------------HHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhccc
Q 023384 184 LVFH------GLGDEDG------------------LKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDI 239 (283)
Q Consensus 184 ~vlh------~~~d~~~------------------~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~ 239 (283)
-.+| +++++.. ..++++++++|+| ||.+++++...
T Consensus 109 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~------------------ 167 (215)
T 4dzr_A 109 PPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLAR---GRAGVFLEVGH------------------ 167 (215)
T ss_dssp CCCCC------------------------CTTHHHHHHHTCCGGGBCS---SSEEEEEECTT------------------
T ss_pred CCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcC---CCeEEEEEECC------------------
Confidence 4443 3333222 6889999999999 78866665311
Q ss_pred ccccccCCccCCHHHHHHHHH--HCCCCeeeEEEcC-CcceEEEEe
Q 023384 240 VMSVNATGKERTESEWAKLFF--DACFSHYKITPIF-GMRFLIEIY 282 (283)
Q Consensus 240 ~~~~~~~~~~~t~~e~~~ll~--~aGf~~~~~~~~~-~~~~~i~~~ 282 (283)
...+++.++++ ++||..+++.... +...++.++
T Consensus 168 ----------~~~~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~~~ 203 (215)
T 4dzr_A 168 ----------NQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVT 203 (215)
T ss_dssp ----------SCHHHHHHHTGGGGGGTEECCEEECTTSCEEEEEEE
T ss_pred ----------ccHHHHHHHHHHhhcCCceEEEEEecCCCEEEEEEE
Confidence 13567888899 9999988877653 445555554
No 101
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.47 E-value=3e-13 Score=114.03 Aligned_cols=96 Identities=14% Similarity=0.228 Sum_probs=79.2
Q ss_pred CCCeEEEEcCCccH----HHHHHHHHCC----CCeEEEeec-hHHHhcCCCC----------------------------
Q 023384 118 GLGSLVDVGGGNGS----LSRIISEAFP----GIKCTVLDL-PHVVANLPEA---------------------------- 160 (283)
Q Consensus 118 ~~~~vlDvGgG~G~----~~~~l~~~~p----~~~~~~~D~-~~~~~~a~~~---------------------------- 160 (283)
+..+|+|+|||||. +++.+++.+| +.++++.|+ +.+++.|++.
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 34799999999998 5666677655 468999999 8888766431
Q ss_pred ---------CCeEEEEcCCCC-CCC---CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEE
Q 023384 161 ---------DNLKYIAGDMFQ-FIP---PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVII 216 (283)
Q Consensus 161 ---------~rv~~~~~d~~~-~~p---~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli 216 (283)
.+|.|..+|+.+ +++ .||+|+++++|++++++...+++++++++|+| ||.+++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~p---gG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKP---DGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEE---EEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCC---CcEEEE
Confidence 369999999998 554 49999999999999998889999999999999 666655
No 102
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.47 E-value=1.9e-14 Score=119.18 Aligned_cols=133 Identities=15% Similarity=0.091 Sum_probs=90.5
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCC---CCC--CceEEEe---
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQ---FIP--PADAFLF--- 182 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~---~~p--~~D~v~~--- 182 (283)
....+|||||||+|..+..+++..|. +++++|+ |.+++.+++ ..+++++.+|... +++ .||.|++
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeee
Confidence 45689999999999999999887774 7999999 888887764 5678888888754 344 3898875
Q ss_pred --cccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHH
Q 023384 183 --KLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFF 260 (283)
Q Consensus 183 --~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~ 260 (283)
...++++.+ ...++++++++||| ||++++.+........ ....+ .-.....+.+...|.
T Consensus 138 ~~~~~~~~~~~--~~~~~~e~~rvLkP---GG~l~f~~~~~~~~~~-------~~~~~-------~~~~~~~~~~~~~L~ 198 (236)
T 3orh_A 138 PLSEETWHTHQ--FNFIKNHAFRLLKP---GGVLTYCNLTSWGELM-------KSKYS-------DITIMFEETQVPALL 198 (236)
T ss_dssp CCBGGGTTTHH--HHHHHHTHHHHEEE---EEEEEECCHHHHHHHT-------TTTCS-------CHHHHHHHHTHHHHH
T ss_pred ecccchhhhcc--hhhhhhhhhheeCC---CCEEEEEecCCchhhh-------hhhhh-------hhhhhhHHHHHHHHH
Confidence 344555545 45889999999999 7887765422110000 00000 000112456677889
Q ss_pred HCCCCeeeE
Q 023384 261 DACFSHYKI 269 (283)
Q Consensus 261 ~aGf~~~~~ 269 (283)
++||++..+
T Consensus 199 eaGF~~~~i 207 (236)
T 3orh_A 199 EAGFRRENI 207 (236)
T ss_dssp HHTCCGGGE
T ss_pred HcCCeEEEE
Confidence 999997654
No 103
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.47 E-value=7.4e-13 Score=114.14 Aligned_cols=99 Identities=17% Similarity=0.114 Sum_probs=80.3
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------------CCCeEEEEcCCCC-C----C--C
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------------ADNLKYIAGDMFQ-F----I--P 175 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------------~~rv~~~~~d~~~-~----~--p 175 (283)
....+|||||||+|.++..+++ .+..+++++|+ +.+++.+++ ..+++++.+|+.+ + + +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKK-GRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCCEEEEECCCCcHHHHHHHh-cCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 4668999999999999999887 46789999999 777766653 1378999999987 4 3 2
Q ss_pred --CceEEEecccccCC--ChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 176 --PADAFLFKLVFHGL--GDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 176 --~~D~v~~~~vlh~~--~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
.||+|++..++|+. +.++...+|++++++|+| ||.+++..+
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lkp---gG~li~~~~ 156 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNACERLSP---GGYFIGTTP 156 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEE---EEEEEEEEE
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCC---CcEEEEecC
Confidence 59999999999987 445677999999999999 788777655
No 104
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.46 E-value=1.5e-13 Score=120.51 Aligned_cols=112 Identities=13% Similarity=0.095 Sum_probs=89.1
Q ss_pred HHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---------------CCCeEEEEc
Q 023384 105 SFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE---------------ADNLKYIAG 168 (283)
Q Consensus 105 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------------~~rv~~~~~ 168 (283)
..+++ .+. .....+|||||||+|..++.++..++..+++++|+ +.+++.|++ ..+|+|+.+
T Consensus 163 ~~il~-~l~--l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~G 239 (438)
T 3uwp_A 163 AQMID-EIK--MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERG 239 (438)
T ss_dssp HHHHH-HHC--CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEEC
T ss_pred HHHHH-hcC--CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEEC
Confidence 34444 444 66778999999999999999999888777999999 665554432 268999999
Q ss_pred CCCC-CC----CCceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCc
Q 023384 169 DMFQ-FI----PPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEE 225 (283)
Q Consensus 169 d~~~-~~----p~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~ 225 (283)
|+++ ++ +.+|+|++..+++ + ++....|+++++.||| ||+|++.|.+.++..
T Consensus 240 D~~~lp~~d~~~~aDVVf~Nn~~F-~--pdl~~aL~Ei~RvLKP---GGrIVssE~f~p~d~ 295 (438)
T 3uwp_A 240 DFLSEEWRERIANTSVIFVNNFAF-G--PEVDHQLKERFANMKE---GGRIVSSKPFAPLNF 295 (438)
T ss_dssp CTTSHHHHHHHHTCSEEEECCTTC-C--HHHHHHHHHHHTTSCT---TCEEEESSCSSCTTC
T ss_pred cccCCccccccCCccEEEEccccc-C--chHHHHHHHHHHcCCC---CcEEEEeecccCCCC
Confidence 9998 65 3599999987764 3 3445778999999999 899999999888754
No 105
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.46 E-value=2.8e-13 Score=106.67 Aligned_cols=94 Identities=12% Similarity=0.200 Sum_probs=77.6
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCCCC----CCceEEEec
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQFI----PPADAFLFK 183 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~~~----p~~D~v~~~ 183 (283)
.....+|||||||+|.++..+++.+|..+++++|+ +.+++.+++ .+++ ++.+|..+.+ +.||+|++.
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~ 101 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIG 101 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEEC
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEEC
Confidence 55667999999999999999999999999999999 777776653 3378 8889887632 359999999
Q ss_pred ccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 184 LVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 184 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
..+|+ ..+++++++.|+| ||++++.+.
T Consensus 102 ~~~~~------~~~l~~~~~~L~~---gG~l~~~~~ 128 (178)
T 3hm2_A 102 GGLTA------PGVFAAAWKRLPV---GGRLVANAV 128 (178)
T ss_dssp C-TTC------TTHHHHHHHTCCT---TCEEEEEEC
T ss_pred CcccH------HHHHHHHHHhcCC---CCEEEEEee
Confidence 99986 4779999999999 788887663
No 106
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.46 E-value=1.2e-12 Score=106.40 Aligned_cols=137 Identities=13% Similarity=0.127 Sum_probs=94.7
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHH----hcCCCCCCeEEEEcCCCCC-----CC-CceEEEecc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVV----ANLPEADNLKYIAGDMFQF-----IP-PADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~----~~a~~~~rv~~~~~d~~~~-----~p-~~D~v~~~~ 184 (283)
.....+|||||||+|.++..+++..++.+++++|+ +.++ +.+++..++.++.+|...+ ++ .||+|++.
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~- 133 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQD- 133 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEEC-
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEe-
Confidence 45668999999999999999999988779999999 6543 3333346788999988763 22 49999986
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHH----HHHH
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWA----KLFF 260 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~----~ll~ 260 (283)
+.+ .++...++++++++||| ||++++.-...+ .+ ...+.+++. +.++
T Consensus 134 ~~~---~~~~~~~l~~~~r~Lkp---gG~l~i~~~~~~--------------~~---------~~~~~~~~~~~~~~~l~ 184 (210)
T 1nt2_A 134 IAQ---KNQIEILKANAEFFLKE---KGEVVIMVKARS--------------ID---------STAEPEEVFKSVLKEME 184 (210)
T ss_dssp CCS---TTHHHHHHHHHHHHEEE---EEEEEEEEEHHH--------------HC---------TTSCHHHHHHHHHHHHH
T ss_pred ccC---hhHHHHHHHHHHHHhCC---CCEEEEEEecCC--------------cc---------ccCCHHHHHHHHHHHHH
Confidence 322 23344569999999999 788888732110 00 001233331 2388
Q ss_pred HCCCCeeeEEEcCC---cceEEEEeC
Q 023384 261 DACFSHYKITPIFG---MRFLIEIYP 283 (283)
Q Consensus 261 ~aGf~~~~~~~~~~---~~~~i~~~~ 283 (283)
++ |++++...... .+.++.++|
T Consensus 185 ~~-f~~~~~~~~~p~~~~h~~~~~~~ 209 (210)
T 1nt2_A 185 GD-FKIVKHGSLMPYHRDHIFIHAYR 209 (210)
T ss_dssp TT-SEEEEEEECTTTCTTEEEEEEEE
T ss_pred hh-cEEeeeecCCCCCCCcEEEEEEc
Confidence 88 99999887732 467777764
No 107
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.45 E-value=7.4e-13 Score=124.54 Aligned_cols=100 Identities=16% Similarity=0.158 Sum_probs=85.0
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC------------CCCeEEEEcCCCC-CCC--Cce
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAF-PGIKCTVLDL-PHVVANLPE------------ADNLKYIAGDMFQ-FIP--PAD 178 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------------~~rv~~~~~d~~~-~~p--~~D 178 (283)
.....+|||||||+|.++..+++.. |..+++++|+ +.+++.|++ ..+++++.+|+.+ +.+ .||
T Consensus 719 ~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFD 798 (950)
T 3htx_A 719 ESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVD 798 (950)
T ss_dssp HSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCC
T ss_pred ccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCee
Confidence 3467899999999999999999998 5679999999 777776643 3579999999998 554 499
Q ss_pred EEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 179 AFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 179 ~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
+|++..++||++++....+++++++.|+| | .++|..+
T Consensus 799 lVV~~eVLeHL~dp~l~~~L~eI~RvLKP---G-~LIISTP 835 (950)
T 3htx_A 799 IGTCLEVIEHMEEDQACEFGEKVLSLFHP---K-LLIVSTP 835 (950)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHTTCC---S-EEEEEEC
T ss_pred EEEEeCchhhCChHHHHHHHHHHHHHcCC---C-EEEEEec
Confidence 99999999999999888999999999999 5 5555554
No 108
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.45 E-value=4.6e-13 Score=110.52 Aligned_cols=141 Identities=10% Similarity=0.071 Sum_probs=95.8
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHC-CCCeEEEeec-hHHH----hcCCCCCCeEEEEcCCCCC--C----CCceEEEec
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAF-PGIKCTVLDL-PHVV----ANLPEADNLKYIAGDMFQF--I----PPADAFLFK 183 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~D~-~~~~----~~a~~~~rv~~~~~d~~~~--~----p~~D~v~~~ 183 (283)
+....+|||+|||+|.++..+++.+ |..+++++|+ +.++ +.+++..+++++.+|+.++ + ..||+|++.
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~ 154 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFAD 154 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEEC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEc
Confidence 4566899999999999999999986 7889999999 5543 3333347899999999872 2 249999984
Q ss_pred ccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCC
Q 023384 184 LVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAC 263 (283)
Q Consensus 184 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aG 263 (283)
.. ..+....++++++++|+| ||.+++ ........... . ...+-..+ .++|+++|
T Consensus 155 ~~----~~~~~~~~~~~~~~~Lkp---gG~l~i-~~~~~~~~~~~---------~--------~~~~~~~~-~~~l~~~G 208 (233)
T 2ipx_A 155 VA----QPDQTRIVALNAHTFLRN---GGHFVI-SIKANCIDSTA---------S--------AEAVFASE-VKKMQQEN 208 (233)
T ss_dssp CC----CTTHHHHHHHHHHHHEEE---EEEEEE-EEEHHHHCSSS---------C--------HHHHHHHH-HHTTGGGT
T ss_pred CC----CccHHHHHHHHHHHHcCC---CeEEEE-EEcccccccCC---------C--------HHHHHHHH-HHHHHHCC
Confidence 43 333445678999999999 677777 32221000000 0 00001123 58899999
Q ss_pred CCeeeEEEcCC---cceEEEEe
Q 023384 264 FSHYKITPIFG---MRFLIEIY 282 (283)
Q Consensus 264 f~~~~~~~~~~---~~~~i~~~ 282 (283)
|+++++..... .+.+++++
T Consensus 209 f~~~~~~~~~~~~~~~~~v~~~ 230 (233)
T 2ipx_A 209 MKPQEQLTLEPYERDHAVVVGV 230 (233)
T ss_dssp EEEEEEEECTTTSSSEEEEEEE
T ss_pred CceEEEEecCCccCCcEEEEEE
Confidence 99998776643 25666654
No 109
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.44 E-value=5.8e-13 Score=111.46 Aligned_cols=126 Identities=16% Similarity=0.212 Sum_probs=98.7
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCCCC--CCceEEEeccccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQFI--PPADAFLFKLVFH 187 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~~~--p~~D~v~~~~vlh 187 (283)
..+..+|||+|||+|.+++.+++..+ +++++|+ +.+++.+++ .-.+++..+|+.+++ ..||+|++....|
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~Vv~n~~~~ 195 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVANLYAE 195 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEECCHH
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCEEEECCcHH
Confidence 45668999999999999999888765 9999999 777776654 112899999987744 2599999865443
Q ss_pred CCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCee
Q 023384 188 GLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHY 267 (283)
Q Consensus 188 ~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 267 (283)
....+++++++.|+| ||++++.+.... +.+++.++++++||+++
T Consensus 196 -----~~~~~l~~~~~~Lkp---gG~lils~~~~~----------------------------~~~~v~~~l~~~Gf~~~ 239 (254)
T 2nxc_A 196 -----LHAALAPRYREALVP---GGRALLTGILKD----------------------------RAPLVREAMAGAGFRPL 239 (254)
T ss_dssp -----HHHHHHHHHHHHEEE---EEEEEEEEEEGG----------------------------GHHHHHHHHHHTTCEEE
T ss_pred -----HHHHHHHHHHHHcCC---CCEEEEEeeccC----------------------------CHHHHHHHHHHCCCEEE
Confidence 356889999999999 788887653221 36789999999999999
Q ss_pred eEEEcCCcceEE
Q 023384 268 KITPIFGMRFLI 279 (283)
Q Consensus 268 ~~~~~~~~~~~i 279 (283)
++....++.+++
T Consensus 240 ~~~~~~~W~~l~ 251 (254)
T 2nxc_A 240 EEAAEGEWVLLA 251 (254)
T ss_dssp EEEEETTEEEEE
T ss_pred EEeccCCeEEEE
Confidence 988877776654
No 110
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.44 E-value=6.4e-13 Score=113.92 Aligned_cols=151 Identities=13% Similarity=0.105 Sum_probs=97.8
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CC-------CeEEEEcCCCC---------CCC
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----AD-------NLKYIAGDMFQ---------FIP 175 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~-------rv~~~~~d~~~---------~~p 175 (283)
...+|||||||+|..+..+++. ...+++++|+ +.+++.|++ .. +++|...|+.. +++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~-~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG-EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhc-CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 4579999999999877766654 3468999999 888888775 21 26788888722 123
Q ss_pred --CceEEEecccccC-CChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccc---hhhh--hh----hhhcc-----
Q 023384 176 --PADAFLFKLVFHG-LGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEE---HELT--ET----KFLFD----- 238 (283)
Q Consensus 176 --~~D~v~~~~vlh~-~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~---~~~~--~~----~~~~~----- 238 (283)
.||+|++..++|+ +.+++..++|++++++||| ||.+++..+........ ..+. .. ..+..
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~Lkp---GG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 203 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTAS---GGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIA 203 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEE---EEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCC---CCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeecccc
Confidence 4999999999986 4545567999999999999 78887765421110000 0000 00 00000
Q ss_pred ---cccccccC------CccCCHHHHHHHHHHCCCCeeeEEEc
Q 023384 239 ---IVMSVNAT------GKERTESEWAKLFFDACFSHYKITPI 272 (283)
Q Consensus 239 ---~~~~~~~~------~~~~t~~e~~~ll~~aGf~~~~~~~~ 272 (283)
+..+...+ -...+.+++.++++++||++++....
T Consensus 204 ~~~~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f 246 (302)
T 2vdw_A 204 DDRIVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDF 246 (302)
T ss_dssp TTEEEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEH
T ss_pred ccccceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecCh
Confidence 00000011 12457899999999999999887653
No 111
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.44 E-value=7.2e-13 Score=104.25 Aligned_cols=132 Identities=13% Similarity=0.085 Sum_probs=91.6
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC-CCC-CceEEEeccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ-FIP-PADAFLFKLV 185 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~-~~p-~~D~v~~~~v 185 (283)
+....+|||||||+|.++..++...|+.+++++|+ +.+++.+++ ..++++ .|..+ +.+ .||+|++..+
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa~k~ 124 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFLLKM 124 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEEETC
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhHhhH
Confidence 45678999999999999999999999999999999 888877764 224555 67666 334 4999999999
Q ss_pred ccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCcc-CCHHHHHHHHHHCCC
Q 023384 186 FHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKE-RTESEWAKLFFDACF 264 (283)
Q Consensus 186 lh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~t~~e~~~ll~~aGf 264 (283)
||++ ++. ...+.++.++|+| ||.++-.+ ...=.+.. .|.+ .-...|++.+ ...+
T Consensus 125 LHlL-~~~-~~al~~v~~~L~p---ggvfISfp-tksl~Gr~------------------~gm~~~Y~~~~~~~~-~~~~ 179 (200)
T 3fzg_A 125 LPVL-KQQ-DVNILDFLQLFHT---QNFVISFP-IKSLSGKE------------------KGMEENYQLWFESFT-KGWI 179 (200)
T ss_dssp HHHH-HHT-TCCHHHHHHTCEE---EEEEEEEE-CCCCC--C------------------TTCCCCHHHHHHHHT-TTTS
T ss_pred HHhh-hhh-HHHHHHHHHHhCC---CCEEEEeC-hHHhcCCC------------------cchhhhHHHHHHHhc-cCcc
Confidence 9999 432 3556699999999 44444444 22111111 1222 2256677777 5556
Q ss_pred CeeeEEEcCC
Q 023384 265 SHYKITPIFG 274 (283)
Q Consensus 265 ~~~~~~~~~~ 274 (283)
.+++....++
T Consensus 180 ~~~~~~~~~n 189 (200)
T 3fzg_A 180 KILDSKVIGN 189 (200)
T ss_dssp CEEEEEEETT
T ss_pred eeeeeeeeCc
Confidence 6776666654
No 112
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.43 E-value=1.4e-12 Score=107.12 Aligned_cols=136 Identities=13% Similarity=0.126 Sum_probs=98.8
Q ss_pred cCCCCeEEEEcCC-ccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEEcCCC--CCCC--CceEEEecc
Q 023384 116 FEGLGSLVDVGGG-NGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----ADNLKYIAGDMF--QFIP--PADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG-~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~--~~~p--~~D~v~~~~ 184 (283)
.+...+|||+||| +|.++..+++.. ..+++++|+ +.+++.+++ ..+++++.+|+. .+++ .||+|++.-
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~np 131 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAP 131 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECC
Confidence 4567899999999 999999999987 789999999 888877764 337999999964 3443 499999987
Q ss_pred cccCCChhH-----------------HHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCC
Q 023384 185 VFHGLGDED-----------------GLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATG 247 (283)
Q Consensus 185 vlh~~~d~~-----------------~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (283)
.+|..++.. ...+++++.+.|+| ||++++.-....
T Consensus 132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~------------------------- 183 (230)
T 3evz_A 132 PYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNP---GGKVALYLPDKE------------------------- 183 (230)
T ss_dssp CCC---------------CCSSSCHHHHHHHHHHGGGEEE---EEEEEEEEESCH-------------------------
T ss_pred CCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCC---CeEEEEEecccH-------------------------
Confidence 776544322 36889999999999 788877532110
Q ss_pred ccCCHHHHHHHHHHCCCCeeeEEEcCCc--ceEEEEe
Q 023384 248 KERTESEWAKLFFDACFSHYKITPIFGM--RFLIEIY 282 (283)
Q Consensus 248 ~~~t~~e~~~ll~~aGf~~~~~~~~~~~--~~~i~~~ 282 (283)
...+++.++++++||++..+....+. ..++...
T Consensus 184 --~~~~~~~~~l~~~g~~~~~~~~~~g~~~~~~l~f~ 218 (230)
T 3evz_A 184 --KLLNVIKERGIKLGYSVKDIKFKVGTRWRHSLIFF 218 (230)
T ss_dssp --HHHHHHHHHHHHTTCEEEEEEECCCC-CEEEEEEE
T ss_pred --hHHHHHHHHHHHcCCceEEEEecCCCeEEEEEEEe
Confidence 12578889999999977766555443 4455543
No 113
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.43 E-value=2.3e-14 Score=119.91 Aligned_cols=144 Identities=10% Similarity=0.052 Sum_probs=96.5
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCC----CCCC-----CceEE
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMF----QFIP-----PADAF 180 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~----~~~p-----~~D~v 180 (283)
...+|||+|||+|.++..+++++|+.+++++|+ +.+++.+++ .++++++.+|.. ++++ .||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 457999999999999999999988999999999 888877654 357999999853 3343 49999
Q ss_pred EecccccCCCh-------------hHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCC
Q 023384 181 LFKLVFHGLGD-------------EDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATG 247 (283)
Q Consensus 181 ~~~~vlh~~~d-------------~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (283)
++.-..|.... +....++++++++|+| ||++.+++.+..... .......++....+
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Lkp---gG~l~~~~~~~~~~~--------~~l~~~g~~~~~~~ 213 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAE---GGELEFVKRIIHDSL--------QLKKRLRWYSCMLG 213 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHH---HTHHHHHHHHHHHHH--------HHGGGBSCEEEEES
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEec---CCEEEEEHHHHHHHH--------hcccceEEEEECCC
Confidence 99866664431 1123567889999999 788877765432210 00011111111224
Q ss_pred ccCCHHHHHHHHHHCCCCeeeEEEc
Q 023384 248 KERTESEWAKLFFDACFSHYKITPI 272 (283)
Q Consensus 248 ~~~t~~e~~~ll~~aGf~~~~~~~~ 272 (283)
...+.+++.++++++||+.+++...
T Consensus 214 ~~~~~~~~~~~l~~~Gf~~v~~~~~ 238 (254)
T 2h00_A 214 KKCSLAPLKEELRIQGVPKVTYTEF 238 (254)
T ss_dssp STTSHHHHHHHHHHTTCSEEEEEEE
T ss_pred ChhHHHHHHHHHHHcCCCceEEEEE
Confidence 4455689999999999999887665
No 114
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.43 E-value=1.3e-12 Score=107.07 Aligned_cols=141 Identities=13% Similarity=0.110 Sum_probs=99.6
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHH-CCCCeEEEeec-hHHHhcCC----CCCCeEEEEcCCCCC--CC----CceEEEec
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEA-FPGIKCTVLDL-PHVVANLP----EADNLKYIAGDMFQF--IP----PADAFLFK 183 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~----~~~rv~~~~~d~~~~--~p----~~D~v~~~ 183 (283)
++++.+|||+|||+|.++..+++. .|+-+++++|+ +++++.+. +..++..+.+|...+ .+ .+|+|++.
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d 154 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYAD 154 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEe
Confidence 678899999999999999999997 59999999999 87776543 357899999988763 11 38988753
Q ss_pred ccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCC
Q 023384 184 LVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAC 263 (283)
Q Consensus 184 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aG 263 (283)
. ++.. +...++++++++||| ||+++|...........+ .+. ..++..+.|+++|
T Consensus 155 ~--~~~~--~~~~~l~~~~r~LKp---GG~lvI~ik~r~~d~~~p------------------~~~-~~~~ev~~L~~~G 208 (233)
T 4df3_A 155 V--AQPE--QAAIVVRNARFFLRD---GGYMLMAIKARSIDVTTE------------------PSE-VYKREIKTLMDGG 208 (233)
T ss_dssp C--CCTT--HHHHHHHHHHHHEEE---EEEEEEEEECCHHHHHTC------------------CCH-HHHHHHHHHHHTT
T ss_pred c--cCCh--hHHHHHHHHHHhccC---CCEEEEEEecccCCCCCC------------------hHH-HHHHHHHHHHHCC
Confidence 3 2222 345789999999999 799888653222111110 000 1234456789999
Q ss_pred CCeeeEEEcCC---cceEEEEe
Q 023384 264 FSHYKITPIFG---MRFLIEIY 282 (283)
Q Consensus 264 f~~~~~~~~~~---~~~~i~~~ 282 (283)
|+..+...... .+.++.++
T Consensus 209 F~l~e~i~L~pf~~~H~lv~~~ 230 (233)
T 4df3_A 209 LEIKDVVHLDPFDRDHAMIYAV 230 (233)
T ss_dssp CCEEEEEECTTTSTTEEEEEEC
T ss_pred CEEEEEEccCCCCCceEEEEEE
Confidence 99999888744 36776664
No 115
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.43 E-value=5.3e-13 Score=108.25 Aligned_cols=102 Identities=20% Similarity=0.182 Sum_probs=84.6
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEEcCCCC-CCC--CceEEEeccccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----ADNLKYIAGDMFQ-FIP--PADAFLFKLVFH 187 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~rv~~~~~d~~~-~~p--~~D~v~~~~vlh 187 (283)
+....+|||||||+|.++..+++..+. +++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++..++|
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~ 118 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLD 118 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHH
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchh
Confidence 456689999999999999999998665 8999999 777776654 3689999999988 655 499999998887
Q ss_pred CCC-------------hhHHHHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 188 GLG-------------DEDGLKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 188 ~~~-------------d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
++. .++..++|++++++|+| ||++++.+...
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~li~~~~~~ 162 (215)
T 2pxx_A 119 ALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVP---GGRFISMTSAA 162 (215)
T ss_dssp HHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEE---EEEEEEEESCC
T ss_pred hhccccccccccccchhHHHHHHHHHHHHhCcC---CCEEEEEeCCC
Confidence 665 44567999999999999 79988887543
No 116
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.42 E-value=1.3e-12 Score=112.19 Aligned_cols=129 Identities=11% Similarity=0.097 Sum_probs=93.7
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEEcCCCC-C---CC-CceEE
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----------ADNLKYIAGDMFQ-F---IP-PADAF 180 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~rv~~~~~d~~~-~---~p-~~D~v 180 (283)
+...+|||||||+|.++..+++..|..+++++|+ +.+++.+++ ..|++++.+|..+ . .+ .||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 4568999999999999999998878889999999 777766543 3689999999876 2 12 49999
Q ss_pred EecccccCCChhHH--HHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHH
Q 023384 181 LFKLVFHGLGDEDG--LKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKL 258 (283)
Q Consensus 181 ~~~~vlh~~~d~~~--~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l 258 (283)
++....+.+++... ..++++++++|+| ||.+++.... + +. ......++.+.
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~~~~-~-------------~~----------~~~~~~~~~~~ 226 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKP---DGICCNQGES-I-------------WL----------DLELIEKMSRF 226 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEE---EEEEEEEECC-T-------------TT----------CHHHHHHHHHH
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCC---CcEEEEecCC-c-------------cc----------chHHHHHHHHH
Confidence 99777766554433 5889999999999 6777765311 0 00 01136788899
Q ss_pred HHHCCCCeeeEEEc
Q 023384 259 FFDACFSHYKITPI 272 (283)
Q Consensus 259 l~~aGf~~~~~~~~ 272 (283)
++++||..++++..
T Consensus 227 l~~~GF~~v~~~~~ 240 (304)
T 3bwc_A 227 IRETGFASVQYALM 240 (304)
T ss_dssp HHHHTCSEEEEEEC
T ss_pred HHhCCCCcEEEEEe
Confidence 99999999887654
No 117
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.41 E-value=3.9e-12 Score=104.39 Aligned_cols=141 Identities=13% Similarity=0.113 Sum_probs=98.0
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHC-CCCeEEEeec-hHHHhc----CCCCCCeEEEEcCCCCC-----CC-CceEEEec
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAF-PGIKCTVLDL-PHVVAN----LPEADNLKYIAGDMFQF-----IP-PADAFLFK 183 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~----a~~~~rv~~~~~d~~~~-----~p-~~D~v~~~ 183 (283)
+....+|||+|||+|.++..+++.+ |..+++++|+ +.+++. +++..+++++.+|+.++ .+ .||+|++.
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 4566899999999999999999885 6789999999 655443 33347899999999872 23 49999975
Q ss_pred ccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCC
Q 023384 184 LVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAC 263 (283)
Q Consensus 184 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aG 263 (283)
.. ..+....++++++++|+| ||.+++. .........+ .......+++.++ +++
T Consensus 151 ~~----~~~~~~~~l~~~~~~Lkp---gG~l~~~-~~~~~~~~~~-----------------~~~~~~~~~l~~l-~~~- 203 (227)
T 1g8a_A 151 VA----QPTQAKILIDNAEVYLKR---GGYGMIA-VKSRSIDVTK-----------------EPEQVFREVEREL-SEY- 203 (227)
T ss_dssp CC----STTHHHHHHHHHHHHEEE---EEEEEEE-EEGGGTCTTS-----------------CHHHHHHHHHHHH-HTT-
T ss_pred CC----CHhHHHHHHHHHHHhcCC---CCEEEEE-EecCCCCCCC-----------------ChhhhhHHHHHHH-Hhh-
Confidence 43 222334559999999999 7888887 2221111110 0011236777777 777
Q ss_pred CCeeeEEEcCCc---ceEEEEeC
Q 023384 264 FSHYKITPIFGM---RFLIEIYP 283 (283)
Q Consensus 264 f~~~~~~~~~~~---~~~i~~~~ 283 (283)
|++++....... +.+++++|
T Consensus 204 f~~~~~~~~~~~~~~~~~~~~~~ 226 (227)
T 1g8a_A 204 FEVIERLNLEPYEKDHALFVVRK 226 (227)
T ss_dssp SEEEEEEECTTTSSSEEEEEEEC
T ss_pred ceeeeEeccCcccCCCEEEEEEe
Confidence 999988877544 66777765
No 118
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.41 E-value=4.3e-13 Score=112.16 Aligned_cols=104 Identities=16% Similarity=0.137 Sum_probs=79.8
Q ss_pred HHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--CCCeEEEEcCCCC-C------C
Q 023384 105 SFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE--ADNLKYIAGDMFQ-F------I 174 (283)
Q Consensus 105 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~~rv~~~~~d~~~-~------~ 174 (283)
..+++ .++ .....+|||||||+|.++..++++ ..+++++|+ +.+++.+++ ... ++..++.+ + .
T Consensus 35 ~~il~-~l~--l~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~--~v~~~~~~~~~~~~~~~ 107 (261)
T 3iv6_A 35 ENDIF-LEN--IVPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADR--CVTIDLLDITAEIPKEL 107 (261)
T ss_dssp HHHHH-TTT--CCTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSS--CCEEEECCTTSCCCGGG
T ss_pred HHHHH-hcC--CCCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhc--cceeeeeeccccccccc
Confidence 44455 444 667789999999999999999987 568999999 888877764 111 22233322 1 1
Q ss_pred -CCceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 175 -PPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 175 -p~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
..||+|++..++|++++++...++++++++| | ||++++...
T Consensus 108 ~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-P---GG~l~lS~~ 149 (261)
T 3iv6_A 108 AGHFDFVLNDRLINRFTTEEARRACLGMLSLV-G---SGTVRASVK 149 (261)
T ss_dssp TTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-T---TSEEEEEEE
T ss_pred CCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-c---CcEEEEEec
Confidence 2599999999999999988899999999999 9 788887643
No 119
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.41 E-value=5.1e-13 Score=111.64 Aligned_cols=124 Identities=14% Similarity=0.193 Sum_probs=96.8
Q ss_pred HHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHH-CCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCCCCC-
Q 023384 106 FVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEA-FPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQFIP- 175 (283)
Q Consensus 106 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~~~p- 175 (283)
.++. .++ .....+|||+|||+|.++..+++. .|..+++++|+ ++.++.+++ .++++++.+|+.+.++
T Consensus 84 ~i~~-~~~--~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 160 (255)
T 3mb5_A 84 LIVA-YAG--ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEE 160 (255)
T ss_dssp HHHH-HTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCC
T ss_pred HHHH-hhC--CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCC
Confidence 3444 444 667789999999999999999999 88999999999 788777664 3569999999998655
Q ss_pred -CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHH
Q 023384 176 -PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESE 254 (283)
Q Consensus 176 -~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e 254 (283)
.||+|++ +.++.. .+++++.++|+| ||++++...... ..++
T Consensus 161 ~~~D~v~~-----~~~~~~--~~l~~~~~~L~~---gG~l~~~~~~~~----------------------------~~~~ 202 (255)
T 3mb5_A 161 ENVDHVIL-----DLPQPE--RVVEHAAKALKP---GGFFVAYTPCSN----------------------------QVMR 202 (255)
T ss_dssp CSEEEEEE-----CSSCGG--GGHHHHHHHEEE---EEEEEEEESSHH----------------------------HHHH
T ss_pred CCcCEEEE-----CCCCHH--HHHHHHHHHcCC---CCEEEEEECCHH----------------------------HHHH
Confidence 4999987 345543 679999999999 788887652210 2456
Q ss_pred HHHHHHHCC--CCeeeEE
Q 023384 255 WAKLFFDAC--FSHYKIT 270 (283)
Q Consensus 255 ~~~ll~~aG--f~~~~~~ 270 (283)
+.++++++| |..+++.
T Consensus 203 ~~~~l~~~g~~f~~~~~~ 220 (255)
T 3mb5_A 203 LHEKLREFKDYFMKPRTI 220 (255)
T ss_dssp HHHHHHHTGGGBSCCEEE
T ss_pred HHHHHHHcCCCccccEEE
Confidence 778889999 8877764
No 120
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.41 E-value=2.6e-13 Score=114.90 Aligned_cols=118 Identities=15% Similarity=0.123 Sum_probs=92.2
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHH-CCCCeEEEeec-hHHHhcCCC----C---CCeEEEEcCCCCCCC--CceEEEecc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEA-FPGIKCTVLDL-PHVVANLPE----A---DNLKYIAGDMFQFIP--PADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~----~---~rv~~~~~d~~~~~p--~~D~v~~~~ 184 (283)
.....+|||+|||+|.++..+++. .|..+++++|+ +..++.+++ . ++++++.+|+.++++ .||+|++
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~fD~Vi~-- 185 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQMYDAVIA-- 185 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCCEEEEEE--
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCCCccEEEE--
Confidence 567789999999999999999998 78999999999 777766553 2 579999999988654 4999998
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCC
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACF 264 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 264 (283)
++++.. ++|+++.++|+| ||++++...... ..+++.++++++||
T Consensus 186 ---~~~~~~--~~l~~~~~~Lkp---gG~l~i~~~~~~----------------------------~~~~~~~~l~~~Gf 229 (275)
T 1yb2_A 186 ---DIPDPW--NHVQKIASMMKP---GSVATFYLPNFD----------------------------QSEKTVLSLSASGM 229 (275)
T ss_dssp ---CCSCGG--GSHHHHHHTEEE---EEEEEEEESSHH----------------------------HHHHHHHHSGGGTE
T ss_pred ---cCcCHH--HHHHHHHHHcCC---CCEEEEEeCCHH----------------------------HHHHHHHHHHHCCC
Confidence 345543 789999999999 788888763210 13456677778888
Q ss_pred CeeeEEE
Q 023384 265 SHYKITP 271 (283)
Q Consensus 265 ~~~~~~~ 271 (283)
+.+++..
T Consensus 230 ~~~~~~~ 236 (275)
T 1yb2_A 230 HHLETVE 236 (275)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 8777654
No 121
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.41 E-value=2e-12 Score=102.71 Aligned_cols=113 Identities=21% Similarity=0.291 Sum_probs=89.9
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCCCC---CCceEEEecc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQFI---PPADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~~~---p~~D~v~~~~ 184 (283)
.....+|||+|||+|.++..+++.. .+++++|+ +..++.+++ ..++.+..+|+.+++ +.||+|++..
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 108 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVGG 108 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEESC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCCCEEEECC
Confidence 5667899999999999999999987 79999999 777776654 268999999987622 4699999998
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCC
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACF 264 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 264 (283)
++|++ ..+++++.+.|+| ||.+++..... .+..++.+++++.||
T Consensus 109 ~~~~~-----~~~l~~~~~~l~~---gG~l~~~~~~~----------------------------~~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 109 SGGEL-----QEILRIIKDKLKP---GGRIIVTAILL----------------------------ETKFEAMECLRDLGF 152 (192)
T ss_dssp CTTCH-----HHHHHHHHHTEEE---EEEEEEEECBH----------------------------HHHHHHHHHHHHTTC
T ss_pred chHHH-----HHHHHHHHHhcCC---CcEEEEEecCc----------------------------chHHHHHHHHHHCCC
Confidence 87643 5789999999999 78887765311 024678889999999
Q ss_pred Ce
Q 023384 265 SH 266 (283)
Q Consensus 265 ~~ 266 (283)
.+
T Consensus 153 ~~ 154 (192)
T 1l3i_A 153 DV 154 (192)
T ss_dssp CC
T ss_pred ce
Confidence 43
No 122
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.41 E-value=2.7e-13 Score=112.15 Aligned_cols=100 Identities=14% Similarity=0.111 Sum_probs=77.3
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCC---CCC--CceEEEe-cc
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQ---FIP--PADAFLF-KL 184 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~---~~p--~~D~v~~-~~ 184 (283)
....+|||||||+|.++..+++..+ .+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++ .+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 4567999999999999999966543 48999999 888776654 4679999999875 344 4999998 55
Q ss_pred c--ccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 185 V--FHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 185 v--lh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
. .+++.......++++++++||| ||++++++..
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~r~Lkp---gG~l~~~~~~ 172 (236)
T 1zx0_A 138 PLSEETWHTHQFNFIKNHAFRLLKP---GGVLTYCNLT 172 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEE---EEEEEECCHH
T ss_pred ccchhhhhhhhHHHHHHHHHHhcCC---CeEEEEEecC
Confidence 4 4444445556789999999999 7888887643
No 123
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.40 E-value=6.6e-13 Score=110.12 Aligned_cols=120 Identities=16% Similarity=0.126 Sum_probs=92.5
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC-CC-----CCceEEEec
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ-FI-----PPADAFLFK 183 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~~-----p~~D~v~~~ 183 (283)
....+|||||||+|..+..++...|+.+++++|+ +.+++.+++ ..+++++.+|+.+ +. ..||+|++.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 4568999999999999999999999999999999 777776654 2469999999877 43 249999987
Q ss_pred ccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCC
Q 023384 184 LVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAC 263 (283)
Q Consensus 184 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aG 263 (283)
.+ .+ ...+++.+.+.|+| ||.+++..... .. ...+++.+.++++|
T Consensus 149 ~~----~~--~~~~l~~~~~~Lkp---gG~l~~~~g~~----~~----------------------~~~~~~~~~l~~~g 193 (240)
T 1xdz_A 149 AV----AR--LSVLSELCLPLVKK---NGLFVALKAAS----AE----------------------EELNAGKKAITTLG 193 (240)
T ss_dssp CC----SC--HHHHHHHHGGGEEE---EEEEEEEECC-----CH----------------------HHHHHHHHHHHHTT
T ss_pred cc----CC--HHHHHHHHHHhcCC---CCEEEEEeCCC----ch----------------------HHHHHHHHHHHHcC
Confidence 63 23 45889999999999 78887753110 00 01356778899999
Q ss_pred CCeeeEEE
Q 023384 264 FSHYKITP 271 (283)
Q Consensus 264 f~~~~~~~ 271 (283)
|++.++..
T Consensus 194 ~~~~~~~~ 201 (240)
T 1xdz_A 194 GELENIHS 201 (240)
T ss_dssp EEEEEEEE
T ss_pred CeEeEEEE
Confidence 99887654
No 124
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.40 E-value=2.7e-12 Score=104.51 Aligned_cols=98 Identities=15% Similarity=0.175 Sum_probs=77.6
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC-C--CC--CceEEEeccc
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ-F--IP--PADAFLFKLV 185 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~--~p--~~D~v~~~~v 185 (283)
...+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ ..++.++.+|+.+ + ++ .+|+|++...
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 457999999999999999999999999999999 888777654 3689999999987 4 44 3999998765
Q ss_pred ccCCChh------HHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 186 FHGLGDE------DGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 186 lh~~~d~------~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
.+..... ....+|+++.++|+| ||.+++..
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~ 156 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPE---NGEIHFKT 156 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCT---TCEEEEEE
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCC---CcEEEEEe
Confidence 4322111 124789999999999 78877743
No 125
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.40 E-value=3.6e-12 Score=103.09 Aligned_cols=114 Identities=16% Similarity=0.194 Sum_probs=89.9
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCCC---CCCceEEEecc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQF---IPPADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~~---~p~~D~v~~~~ 184 (283)
.....+|||||||+|.++..+++. ..+++++|+ +++++.+++ .++++++.+|+.+. .+.||+|++..
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~ 130 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGG 130 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECS
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECC
Confidence 566789999999999999999988 789999999 888877654 23899999999882 34699999877
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCC
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACF 264 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 264 (283)
.+ + .. +++++.+.|+| ||++++..... .+..++.+++++.|+
T Consensus 131 ~~----~--~~-~l~~~~~~Lkp---gG~lv~~~~~~----------------------------~~~~~~~~~l~~~g~ 172 (204)
T 3njr_A 131 GG----S--QA-LYDRLWEWLAP---GTRIVANAVTL----------------------------ESETLLTQLHARHGG 172 (204)
T ss_dssp CC----C--HH-HHHHHHHHSCT---TCEEEEEECSH----------------------------HHHHHHHHHHHHHCS
T ss_pred cc----c--HH-HHHHHHHhcCC---CcEEEEEecCc----------------------------ccHHHHHHHHHhCCC
Confidence 44 2 23 89999999999 78887754311 035677888999998
Q ss_pred CeeeE
Q 023384 265 SHYKI 269 (283)
Q Consensus 265 ~~~~~ 269 (283)
++.++
T Consensus 173 ~i~~i 177 (204)
T 3njr_A 173 QLLRI 177 (204)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 87765
No 126
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.38 E-value=9.6e-13 Score=106.37 Aligned_cols=90 Identities=19% Similarity=0.224 Sum_probs=73.7
Q ss_pred CCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCCCCC--CceEEEecccccCC
Q 023384 119 LGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQFIP--PADAFLFKLVFHGL 189 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~~~p--~~D~v~~~~vlh~~ 189 (283)
..+|||||||+|..+..+++.+|..+++++|+ +.+++.+++ ..+++++.+|+.+..+ .||+|++..+ +
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~-~-- 142 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAF-A-- 142 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSCS-S--
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEecc-C--
Confidence 57999999999999999999999999999999 777766653 2459999999988332 5999997543 2
Q ss_pred ChhHHHHHHHHHHHhhccCCCCcEEEEE
Q 023384 190 GDEDGLKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 190 ~d~~~~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
+ ...+++++++.|+| ||.+++.
T Consensus 143 -~--~~~~l~~~~~~L~~---gG~l~~~ 164 (207)
T 1jsx_A 143 -S--LNDMVSWCHHLPGE---QGRFYAL 164 (207)
T ss_dssp -S--HHHHHHHHTTSEEE---EEEEEEE
T ss_pred -C--HHHHHHHHHHhcCC---CcEEEEE
Confidence 2 35889999999999 6877775
No 127
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.38 E-value=1.9e-12 Score=102.83 Aligned_cols=99 Identities=17% Similarity=0.242 Sum_probs=75.8
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC-C-C-C-CceEEEecc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ-F-I-P-PADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~-~-p-~~D~v~~~~ 184 (283)
+....+|||+|||+|.++..+++. ..+++++|+ +.+++.+++ .++++++..|... + . + .||+|++..
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~ 97 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNL 97 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeC
Confidence 456789999999999999999988 789999999 888877765 2789999977665 2 3 3 499998763
Q ss_pred -cccCC------ChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 185 -VFHGL------GDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 185 -vlh~~------~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
.+++- ..+....+|+++.+.||| ||++++...
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~ 136 (185)
T 3mti_A 98 GYLPSADKSVITKPHTTLEAIEKILDRLEV---GGRLAIMIY 136 (185)
T ss_dssp C-----------CHHHHHHHHHHHHHHEEE---EEEEEEEEC
T ss_pred CCCCCcchhcccChhhHHHHHHHHHHhcCC---CcEEEEEEe
Confidence 33320 234567889999999999 788888764
No 128
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.38 E-value=9.6e-12 Score=109.80 Aligned_cols=97 Identities=11% Similarity=0.045 Sum_probs=80.2
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCCCCC-----CceEEEeccc
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQFIP-----PADAFLFKLV 185 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~~~p-----~~D~v~~~~v 185 (283)
...+||||| |+|.++..+++..|+.+++++|+ +.+++.+++ ..+++++.+|+.+++| .||+|++...
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC
Confidence 458999999 99999999999988889999999 888887765 2389999999988433 4999999887
Q ss_pred ccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 186 FHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 186 lh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
+|... ...+|++++++|+| ||++++++...
T Consensus 251 ~~~~~---~~~~l~~~~~~Lkp---gG~~~~~~~~~ 280 (373)
T 2qm3_A 251 ETLEA---IRAFVGRGIATLKG---PRCAGYFGITR 280 (373)
T ss_dssp SSHHH---HHHHHHHHHHTBCS---TTCEEEEEECT
T ss_pred CchHH---HHHHHHHHHHHccc---CCeEEEEEEec
Confidence 76442 47899999999999 78776766543
No 129
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.38 E-value=3.5e-12 Score=104.00 Aligned_cols=130 Identities=12% Similarity=0.062 Sum_probs=101.0
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCCCCC---CceEEEecc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQFIP---PADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~~~p---~~D~v~~~~ 184 (283)
.++..+|+|||||+|.+++.+++..|..+++++|+ +..++.|++ .++|++..+|.+++++ .||+|++..
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG 92 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAG 92 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcC
Confidence 45567999999999999999999999999999999 888777764 4689999999998654 499998865
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCC
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACF 264 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 264 (283)
. ..+-...||..+.+.|+| +|++++ .+.. ..+.++++|.+.||
T Consensus 93 ~----Gg~~i~~Il~~~~~~L~~---~~~lVl-q~~~-----------------------------~~~~vr~~L~~~Gf 135 (225)
T 3kr9_A 93 M----GGRLIARILEEGLGKLAN---VERLIL-QPNN-----------------------------REDDLRIWLQDHGF 135 (225)
T ss_dssp E----CHHHHHHHHHHTGGGCTT---CCEEEE-EESS-----------------------------CHHHHHHHHHHTTE
T ss_pred C----ChHHHHHHHHHHHHHhCC---CCEEEE-ECCC-----------------------------CHHHHHHHHHHCCC
Confidence 4 334467899999999998 566555 4221 25678899999999
Q ss_pred CeeeEE--EcCC-cceEEEEe
Q 023384 265 SHYKIT--PIFG-MRFLIEIY 282 (283)
Q Consensus 265 ~~~~~~--~~~~-~~~~i~~~ 282 (283)
.+++.. .-.+ +.-+|.+.
T Consensus 136 ~i~~e~lv~e~~~~Yeii~~~ 156 (225)
T 3kr9_A 136 QIVAESILEEAGKFYEILVVE 156 (225)
T ss_dssp EEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEEEECCEEEEEEEEE
Confidence 998754 2233 56666664
No 130
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.38 E-value=4.2e-13 Score=110.27 Aligned_cols=114 Identities=9% Similarity=0.082 Sum_probs=88.6
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEcCCCC--CCC---CceEEEecccccC
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAGDMFQ--FIP---PADAFLFKLVFHG 188 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~--~~p---~~D~v~~~~vlh~ 188 (283)
.....+|||||||+|.++..+++. ..+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++..
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~---- 119 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRR---- 119 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEES----
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCC----
Confidence 355689999999999999999998 679999999 888877765 6789999999965 444 499999872
Q ss_pred CChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCeee
Q 023384 189 LGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYK 268 (283)
Q Consensus 189 ~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 268 (283)
+ ...+|++++++|+| ||.++.. +...+.+++.++++++||+..+
T Consensus 120 --~--~~~~l~~~~~~Lkp---gG~l~~~-----------------------------~~~~~~~~~~~~l~~~Gf~~~~ 163 (226)
T 3m33_A 120 --G--PTSVILRLPELAAP---DAHFLYV-----------------------------GPRLNVPEVPERLAAVGWDIVA 163 (226)
T ss_dssp --C--CSGGGGGHHHHEEE---EEEEEEE-----------------------------ESSSCCTHHHHHHHHTTCEEEE
T ss_pred --C--HHHHHHHHHHHcCC---CcEEEEe-----------------------------CCcCCHHHHHHHHHHCCCeEEE
Confidence 2 23779999999999 6777600 1112456788899999998877
Q ss_pred EEE
Q 023384 269 ITP 271 (283)
Q Consensus 269 ~~~ 271 (283)
+..
T Consensus 164 ~~~ 166 (226)
T 3m33_A 164 EDH 166 (226)
T ss_dssp EEE
T ss_pred EEe
Confidence 644
No 131
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.38 E-value=9.1e-12 Score=102.28 Aligned_cols=142 Identities=11% Similarity=0.069 Sum_probs=95.2
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHH-CCCCeEEEeec-hHHH----hcCCCCCCeEEEEcCCCCC-----C-CCceEEEec
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEA-FPGIKCTVLDL-PHVV----ANLPEADNLKYIAGDMFQF-----I-PPADAFLFK 183 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~D~-~~~~----~~a~~~~rv~~~~~d~~~~-----~-p~~D~v~~~ 183 (283)
+.+..+|||+|||+|.++..+++. .|+.+++++|+ +.++ +.+++..++.++.+|...+ + ..||+|++.
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d 153 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVD 153 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEec
Confidence 567789999999999999999986 46889999999 6553 3333356899999998762 1 249999886
Q ss_pred ccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCC
Q 023384 184 LVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAC 263 (283)
Q Consensus 184 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aG 263 (283)
... ++ ....+++.+++.||| ||++++.......+... ...+ ..++..+.|+++|
T Consensus 154 ~a~---~~-~~~il~~~~~~~Lkp---GG~lvisik~~~~d~t~------------------~~~e-~~~~~~~~L~~~g 207 (232)
T 3id6_C 154 IAQ---PD-QTDIAIYNAKFFLKV---NGDMLLVIKARSIDVTK------------------DPKE-IYKTEVEKLENSN 207 (232)
T ss_dssp CCC---TT-HHHHHHHHHHHHEEE---EEEEEEEEC-------C------------------CSSS-STTHHHHHHHHTT
T ss_pred CCC---hh-HHHHHHHHHHHhCCC---CeEEEEEEccCCcccCC------------------CHHH-HHHHHHHHHHHCC
Confidence 443 22 223345566679999 78888863211100000 0111 1234556788999
Q ss_pred CCeeeEEEcCC---cceEEEEeC
Q 023384 264 FSHYKITPIFG---MRFLIEIYP 283 (283)
Q Consensus 264 f~~~~~~~~~~---~~~~i~~~~ 283 (283)
|++.+...... .+.++++++
T Consensus 208 f~~~~~~~l~p~~~~h~~v~~~~ 230 (232)
T 3id6_C 208 FETIQIINLDPYDKDHAIVLSKY 230 (232)
T ss_dssp EEEEEEEECTTTCSSCEEEEEEE
T ss_pred CEEEEEeccCCCcCceEEEEEEe
Confidence 99999888743 477877764
No 132
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.37 E-value=1.2e-12 Score=104.90 Aligned_cols=102 Identities=18% Similarity=0.254 Sum_probs=80.7
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC-C-CC--CceEEEe
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAF-PGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ-F-IP--PADAFLF 182 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~-~-~p--~~D~v~~ 182 (283)
.....+|||+|||+|.++..+++.+ |..+++++|+ +.+++.+++ ..+++++.+|+.+ + .. .||+|++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 99 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMF 99 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEE
Confidence 5566899999999999999999986 7789999999 788877664 2689999999876 3 32 4999998
Q ss_pred ccccc-------CCChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 183 KLVFH-------GLGDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 183 ~~vlh-------~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
...+. ....++..++++++.++|+| ||++++....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~---gG~l~~~~~~ 141 (197)
T 3eey_A 100 NLGYLPSGDHSISTRPETTIQALSKAMELLVT---GGIITVVIYY 141 (197)
T ss_dssp EESBCTTSCTTCBCCHHHHHHHHHHHHHHEEE---EEEEEEEECC
T ss_pred cCCcccCcccccccCcccHHHHHHHHHHhCcC---CCEEEEEEcc
Confidence 76551 11233456799999999999 7888887643
No 133
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.37 E-value=1.3e-12 Score=109.01 Aligned_cols=121 Identities=11% Similarity=0.015 Sum_probs=93.1
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC-CC-----CCceEEEec
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ-FI-----PPADAFLFK 183 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~~-----p~~D~v~~~ 183 (283)
....+|||||||+|..+..++..+|+.+++++|+ +..++.+++ ..+++++.+|+.+ +. ..||+|++.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 4568999999999999999999999999999999 777776654 3469999999887 43 259999987
Q ss_pred ccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCC
Q 023384 184 LVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAC 263 (283)
Q Consensus 184 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aG 263 (283)
.+ .+ ...+++.+.+.|+| ||++++....... . ...++.+.+++.|
T Consensus 159 a~----~~--~~~ll~~~~~~Lkp---gG~l~~~~g~~~~---~-----------------------e~~~~~~~l~~~G 203 (249)
T 3g89_A 159 AV----AP--LCVLSELLLPFLEV---GGAAVAMKGPRVE---E-----------------------ELAPLPPALERLG 203 (249)
T ss_dssp SS----CC--HHHHHHHHGGGEEE---EEEEEEEECSCCH---H-----------------------HHTTHHHHHHHHT
T ss_pred Cc----CC--HHHHHHHHHHHcCC---CeEEEEEeCCCcH---H-----------------------HHHHHHHHHHHcC
Confidence 54 22 34789999999999 7888875521100 0 1345677888899
Q ss_pred CCeeeEEEc
Q 023384 264 FSHYKITPI 272 (283)
Q Consensus 264 f~~~~~~~~ 272 (283)
|+..++.+.
T Consensus 204 ~~~~~~~~~ 212 (249)
T 3g89_A 204 GRLGEVLAL 212 (249)
T ss_dssp EEEEEEEEE
T ss_pred CeEEEEEEe
Confidence 998887654
No 134
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.36 E-value=2.4e-12 Score=108.87 Aligned_cols=95 Identities=17% Similarity=0.266 Sum_probs=79.4
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC-CCCCceEEEeccccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ-FIPPADAFLFKLVFH 187 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~~p~~D~v~~~~vlh 187 (283)
+....+|||||||+|.++..++.+.++.+++++|+ +++++.|++ .++++|+.+|..+ +...||+|++...
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~~a~-- 197 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMVAAL-- 197 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEECTT--
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEECCC--
Confidence 66789999999999988877777788999999999 888888775 3789999999988 5345999998654
Q ss_pred CCChhHHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 188 GLGDEDGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 188 ~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
.++ ..++++++++.||| ||++++.+
T Consensus 198 -~~d--~~~~l~el~r~LkP---GG~Lvv~~ 222 (298)
T 3fpf_A 198 -AEP--KRRVFRNIHRYVDT---ETRIIYRT 222 (298)
T ss_dssp -CSC--HHHHHHHHHHHCCT---TCEEEEEE
T ss_pred -ccC--HHHHHHHHHHHcCC---CcEEEEEc
Confidence 233 45889999999999 79988876
No 135
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.36 E-value=6.2e-12 Score=102.74 Aligned_cols=130 Identities=8% Similarity=-0.041 Sum_probs=100.9
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCCCC-C--CceEEEecc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQFI-P--PADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~~~-p--~~D~v~~~~ 184 (283)
.++..+|+|||||+|.+++.+++..|..+++++|+ +..++.|++ .+++++..+|.++.+ + .||+|++..
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaG 98 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICG 98 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeC
Confidence 45568999999999999999999999999999999 888877764 568999999999943 3 499998766
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCC
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACF 264 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 264 (283)
+. -+-..+||....+.|++ +|++++.- .. ..++++++|.+.||
T Consensus 99 mG----g~lI~~IL~~~~~~l~~---~~~lIlqp-~~-----------------------------~~~~lr~~L~~~Gf 141 (230)
T 3lec_A 99 MG----GRLIADILNNDIDKLQH---VKTLVLQP-NN-----------------------------REDDLRKWLAANDF 141 (230)
T ss_dssp EC----HHHHHHHHHHTGGGGTT---CCEEEEEE-SS-----------------------------CHHHHHHHHHHTTE
T ss_pred Cc----hHHHHHHHHHHHHHhCc---CCEEEEEC-CC-----------------------------ChHHHHHHHHHCCC
Confidence 53 35577899999999998 56655432 11 26788999999999
Q ss_pred CeeeEEEc---CCcceEEEEe
Q 023384 265 SHYKITPI---FGMRFLIEIY 282 (283)
Q Consensus 265 ~~~~~~~~---~~~~~~i~~~ 282 (283)
.+.+..-. .-+.-||.+.
T Consensus 142 ~i~~E~lv~e~~~~Yeii~~~ 162 (230)
T 3lec_A 142 EIVAEDILTENDKRYEILVVK 162 (230)
T ss_dssp EEEEEEEEEC--CEEEEEEEE
T ss_pred EEEEEEEEEECCEEEEEEEEE
Confidence 99875432 2356677664
No 136
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.35 E-value=3.3e-12 Score=112.66 Aligned_cols=106 Identities=22% Similarity=0.347 Sum_probs=84.2
Q ss_pred HHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---------CCCeEEEEcCCCCCCC-
Q 023384 107 VVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE---------ADNLKYIAGDMFQFIP- 175 (283)
Q Consensus 107 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~rv~~~~~d~~~~~p- 175 (283)
+++ .++ .....+|||+|||+|.++..+++.+|..+++++|+ +.+++.+++ ..+++|+.+|++++++
T Consensus 214 ll~-~l~--~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~ 290 (375)
T 4dcm_A 214 FMQ-HLP--ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 290 (375)
T ss_dssp HHH-TCC--CSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCT
T ss_pred HHH-hCc--ccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCC
Confidence 455 444 33448999999999999999999999999999999 777777664 1258899999999655
Q ss_pred -CceEEEecccccC---CChhHHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 176 -PADAFLFKLVFHG---LGDEDGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 176 -~~D~v~~~~vlh~---~~d~~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
.||+|++.-.+|+ ..+....++++++++.|+| ||+++++.
T Consensus 291 ~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~iv~ 334 (375)
T 4dcm_A 291 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKI---NGELYIVA 334 (375)
T ss_dssp TCEEEEEECCCC-------CCHHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred CCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCC---CcEEEEEE
Confidence 4999999999885 3455566899999999999 78888864
No 137
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.35 E-value=1.3e-12 Score=114.21 Aligned_cols=109 Identities=19% Similarity=0.274 Sum_probs=87.3
Q ss_pred HHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCCCCC-Cc
Q 023384 105 SFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQFIP-PA 177 (283)
Q Consensus 105 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~~~p-~~ 177 (283)
..+++ .++ .....+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ ...++++.+|+++..+ .|
T Consensus 186 ~~ll~-~l~--~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~f 262 (343)
T 2pjd_A 186 QLLLS-TLT--PHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRF 262 (343)
T ss_dssp HHHHH-HSC--TTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCE
T ss_pred HHHHH-hcC--cCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCe
Confidence 34455 443 23457999999999999999999999999999999 777776654 3346789999988433 59
Q ss_pred eEEEecccccC---CChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 178 DAFLFKLVFHG---LGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 178 D~v~~~~vlh~---~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
|+|++..++|+ +..+...+++++++++|+| ||.++++..
T Consensus 263 D~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~ 304 (343)
T 2pjd_A 263 DMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNS---GGELRIVAN 304 (343)
T ss_dssp EEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEE---EEEEEEEEE
T ss_pred eEEEECCCcccCccCCHHHHHHHHHHHHHhCCC---CcEEEEEEc
Confidence 99999999986 3456678999999999999 799888764
No 138
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.35 E-value=7.8e-12 Score=104.83 Aligned_cols=135 Identities=14% Similarity=0.167 Sum_probs=98.8
Q ss_pred cC-CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC-C--CC--CceEEE
Q 023384 116 FE-GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ-F--IP--PADAFL 181 (283)
Q Consensus 116 ~~-~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~-~--~p--~~D~v~ 181 (283)
.. ...+|||+|||+|.++..++++.+. +++++|+ +.+++.+++ .++++++.+|+.+ + ++ .||+|+
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEE
Confidence 45 6789999999999999999999776 9999999 777776654 4589999999988 3 32 499999
Q ss_pred ecccccCC------------------ChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhccccccc
Q 023384 182 FKLVFHGL------------------GDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSV 243 (283)
Q Consensus 182 ~~~vlh~~------------------~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (283)
+.-.++.. .......+++.+.+.|+| ||+++++- +.
T Consensus 125 ~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~---~~-------------------- 178 (259)
T 3lpm_A 125 CNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQ---GGKANFVH---RP-------------------- 178 (259)
T ss_dssp ECCCC-----------------------HHHHHHHHHHHHHEEE---EEEEEEEE---CT--------------------
T ss_pred ECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccC---CcEEEEEE---cH--------------------
Confidence 96544322 113346799999999999 78887742 11
Q ss_pred ccCCccCCHHHHHHHHHHCCCCeeeEEEc---CC---cceEEEEeC
Q 023384 244 NATGKERTESEWAKLFFDACFSHYKITPI---FG---MRFLIEIYP 283 (283)
Q Consensus 244 ~~~~~~~t~~e~~~ll~~aGf~~~~~~~~---~~---~~~~i~~~~ 283 (283)
....++.+++++.||...++... ++ ...+++++|
T Consensus 179 ------~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~~~k 218 (259)
T 3lpm_A 179 ------ERLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGIK 218 (259)
T ss_dssp ------TTHHHHHHHHHHTTEEEEEEEEEESSTTSCCSEEEEEEEE
T ss_pred ------HHHHHHHHHHHHCCCceEEEEEeecCCCCCcEEEEEEEEe
Confidence 13567888899999988876654 22 245566553
No 139
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.34 E-value=3.2e-12 Score=116.18 Aligned_cols=105 Identities=16% Similarity=0.159 Sum_probs=84.9
Q ss_pred HHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEEcCCCC-CCC-
Q 023384 105 SFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPE-------ADNLKYIAGDMFQ-FIP- 175 (283)
Q Consensus 105 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~rv~~~~~d~~~-~~p- 175 (283)
..+++ .+. .....+|||||||+|.+++.+++ .+..+++++|+.++++.+++ .++++++.+|+.+ +++
T Consensus 148 ~~il~-~l~--~~~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~ 223 (480)
T 3b3j_A 148 RAILQ-NHT--DFKDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPE 223 (480)
T ss_dssp HHHHH-TGG--GTTTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSS
T ss_pred HHHHH-hhh--hcCCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccCC
Confidence 44555 444 44568999999999999998877 57789999999557665543 3789999999998 666
Q ss_pred CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEE
Q 023384 176 PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVII 216 (283)
Q Consensus 176 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli 216 (283)
.||+|++..++|++.+++....+.++++.|+| ||.+++
T Consensus 224 ~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~Lkp---gG~li~ 261 (480)
T 3b3j_A 224 QVDIIISEPMGYMLFNERMLESYLHAKKYLKP---SGNMFP 261 (480)
T ss_dssp CEEEEECCCCHHHHTCHHHHHHHHHGGGGEEE---EEEEES
T ss_pred CeEEEEEeCchHhcCcHHHHHHHHHHHHhcCC---CCEEEE
Confidence 49999998888888888888889999999999 677663
No 140
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.33 E-value=3e-12 Score=100.86 Aligned_cols=109 Identities=15% Similarity=0.090 Sum_probs=83.9
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--CCCeEEEEcCCCC-CC---C--CceEEEecccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE--ADNLKYIAGDMFQ-FI---P--PADAFLFKLVF 186 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~~rv~~~~~d~~~-~~---p--~~D~v~~~~vl 186 (283)
.....+|||||||. +.+|+ +.+++.+++ ..+++++.+|+.+ +. + .||+|++..++
T Consensus 10 ~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l 73 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVP 73 (176)
T ss_dssp CCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCST
T ss_pred CCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChh
Confidence 56778999999996 23787 777777665 3469999999987 54 4 39999999999
Q ss_pred cCC-ChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCC
Q 023384 187 HGL-GDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACF 264 (283)
Q Consensus 187 h~~-~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 264 (283)
|++ ++. .++|++++++||| ||++++.+....... .....++.++|.++|+++||
T Consensus 74 ~~~~~~~--~~~l~~~~r~Lkp---gG~l~~~~~~~~~~~-------------------~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 74 GSTTLHS--AEILAEIARILRP---GGCLFLKEPVETAVD-------------------NNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp TCCCCCC--HHHHHHHHHHEEE---EEEEEEEEEEESSSC-------------------SSSSSCCHHHHHHHHHHTTC
T ss_pred hhcccCH--HHHHHHHHHHCCC---CEEEEEEcccccccc-------------------cccccCCHHHHHHHHHHCCC
Confidence 998 665 4889999999999 799888654332110 01234588999999999999
No 141
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.32 E-value=5.8e-12 Score=105.20 Aligned_cols=125 Identities=16% Similarity=0.162 Sum_probs=95.7
Q ss_pred HHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHH-CCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC-CCC
Q 023384 106 FVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEA-FPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ-FIP 175 (283)
Q Consensus 106 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~-~~p 175 (283)
.++. .++ .....+|||+|||+|.++..+++. .|..+++++|+ +..++.+++ .+++++..+|+.+ +++
T Consensus 87 ~~~~-~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~ 163 (258)
T 2pwy_A 87 AMVT-LLD--LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELE 163 (258)
T ss_dssp HHHH-HTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCC
T ss_pred HHHH-HcC--CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC
Confidence 4455 444 667789999999999999999998 68899999999 777766653 2689999999988 465
Q ss_pred --CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHH
Q 023384 176 --PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTES 253 (283)
Q Consensus 176 --~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 253 (283)
.||+|++ ++++.. .+|+++.++|+| ||++++.+.... ...
T Consensus 164 ~~~~D~v~~-----~~~~~~--~~l~~~~~~L~~---gG~l~~~~~~~~----------------------------~~~ 205 (258)
T 2pwy_A 164 EAAYDGVAL-----DLMEPW--KVLEKAALALKP---DRFLVAYLPNIT----------------------------QVL 205 (258)
T ss_dssp TTCEEEEEE-----ESSCGG--GGHHHHHHHEEE---EEEEEEEESCHH----------------------------HHH
T ss_pred CCCcCEEEE-----CCcCHH--HHHHHHHHhCCC---CCEEEEEeCCHH----------------------------HHH
Confidence 3999998 344443 779999999999 788888763210 134
Q ss_pred HHHHHHHHCCCCeeeEEE
Q 023384 254 EWAKLFFDACFSHYKITP 271 (283)
Q Consensus 254 e~~~ll~~aGf~~~~~~~ 271 (283)
++.+.++++||..+++..
T Consensus 206 ~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 206 ELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp HHHHHHTTTTEEEEEEEE
T ss_pred HHHHHHHHCCCceEEEEE
Confidence 666778888988766543
No 142
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.32 E-value=1.6e-11 Score=103.96 Aligned_cols=121 Identities=17% Similarity=0.056 Sum_probs=93.1
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC-CCC-CceEEEeccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ-FIP-PADAFLFKLV 185 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~-~~p-~~D~v~~~~v 185 (283)
..+..+|||+|||+|.++..+++..+. +++++|+ +.+++.+++ .++++++.+|+++ ..+ .||+|++...
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p 201 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCc
Confidence 455789999999999999999999877 8999999 888776654 4569999999998 333 4999998543
Q ss_pred ccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCC
Q 023384 186 FHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFS 265 (283)
Q Consensus 186 lh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 265 (283)
. ....+++++.++|+| ||.+++.+...... ......+++.+.++++||+
T Consensus 202 ~------~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~----------------------~~~~~~~~i~~~~~~~G~~ 250 (278)
T 2frn_A 202 V------RTHEFIPKALSIAKD---GAIIHYHNTVPEKL----------------------MPREPFETFKRITKEYGYD 250 (278)
T ss_dssp S------SGGGGHHHHHHHEEE---EEEEEEEEEEEGGG----------------------TTTTTHHHHHHHHHHTTCE
T ss_pred h------hHHHHHHHHHHHCCC---CeEEEEEEeecccc----------------------ccccHHHHHHHHHHHcCCe
Confidence 2 124778999999999 78888777543111 0122467889999999998
Q ss_pred eee
Q 023384 266 HYK 268 (283)
Q Consensus 266 ~~~ 268 (283)
...
T Consensus 251 ~~~ 253 (278)
T 2frn_A 251 VEK 253 (278)
T ss_dssp EEE
T ss_pred eEE
Confidence 765
No 143
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.30 E-value=6.3e-12 Score=105.37 Aligned_cols=97 Identities=18% Similarity=0.211 Sum_probs=77.5
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEcCCCC-CCC--CceEEEecccccCCCh
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAGDMFQ-FIP--PADAFLFKLVFHGLGD 191 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~-~~p--~~D~v~~~~vlh~~~d 191 (283)
....+|||||||+|.++..+++. ..+++++|+ +.+++.+++ ... .++.+|+.+ +++ .||+|++..+++++.+
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~-~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~ 129 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGVK-NVVEAKAEDLPFPSGAFEAVLALGDVLSYVE 129 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTCS-CEEECCTTSCCSCTTCEEEEEECSSHHHHCS
T ss_pred CCCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcCC-CEEECcHHHCCCCCCCEEEEEEcchhhhccc
Confidence 46689999999999999999987 568999999 788777665 222 388999987 654 4999999887766643
Q ss_pred hHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 192 EDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 192 ~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
+ ...+|++++++|+| ||.+++....
T Consensus 130 ~-~~~~l~~~~~~Lkp---gG~l~~~~~~ 154 (260)
T 2avn_A 130 N-KDKAFSEIRRVLVP---DGLLIATVDN 154 (260)
T ss_dssp C-HHHHHHHHHHHEEE---EEEEEEEEEB
T ss_pred c-HHHHHHHHHHHcCC---CeEEEEEeCC
Confidence 3 56889999999999 7888876643
No 144
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.30 E-value=6.8e-12 Score=109.75 Aligned_cols=105 Identities=17% Similarity=0.174 Sum_probs=83.9
Q ss_pred HHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEEcCCCC-CCC-
Q 023384 105 SFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPE-------ADNLKYIAGDMFQ-FIP- 175 (283)
Q Consensus 105 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~rv~~~~~d~~~-~~p- 175 (283)
..+.+ .+. .....+|||||||+|.++..++++ +..+++++|+.++++.+++ .++++++.+|+.+ +.+
T Consensus 40 ~~i~~-~l~--~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~ 115 (348)
T 2y1w_A 40 RAILQ-NHT--DFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPE 115 (348)
T ss_dssp HHHHH-TGG--GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSS
T ss_pred HHHHh-ccc--cCCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCCC
Confidence 33444 443 446689999999999999988875 6679999999556555443 3789999999998 665
Q ss_pred CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEE
Q 023384 176 PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVII 216 (283)
Q Consensus 176 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli 216 (283)
.||+|++..+++++..+.....+.++++.|+| ||.+++
T Consensus 116 ~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~li~ 153 (348)
T 2y1w_A 116 QVDIIISEPMGYMLFNERMLESYLHAKKYLKP---SGNMFP 153 (348)
T ss_dssp CEEEEEECCCBTTBTTTSHHHHHHHGGGGEEE---EEEEES
T ss_pred ceeEEEEeCchhcCChHHHHHHHHHHHhhcCC---CeEEEE
Confidence 49999999999999888778889999999999 677764
No 145
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.30 E-value=1.8e-11 Score=100.76 Aligned_cols=130 Identities=11% Similarity=0.071 Sum_probs=99.5
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCCCCC---CceEEEecc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQFIP---PADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~~~p---~~D~v~~~~ 184 (283)
.++..+|+|||||+|.+++.+++..|..+++++|+ +..++.|++ .++|++..+|.++.++ .||+|++..
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviag 98 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAG 98 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeC
Confidence 45668999999999999999999999999999999 888877764 4689999999999443 399998865
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCC
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACF 264 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 264 (283)
+ .-+-...||....+.|++ ++++++.- .. ..+.++++|.+.||
T Consensus 99 m----Gg~lI~~IL~~~~~~L~~---~~~lIlq~-~~-----------------------------~~~~lr~~L~~~Gf 141 (244)
T 3gnl_A 99 M----GGTLIRTILEEGAAKLAG---VTKLILQP-NI-----------------------------AAWQLREWSEQNNW 141 (244)
T ss_dssp E----CHHHHHHHHHHTGGGGTT---CCEEEEEE-SS-----------------------------CHHHHHHHHHHHTE
T ss_pred C----chHHHHHHHHHHHHHhCC---CCEEEEEc-CC-----------------------------ChHHHHHHHHHCCC
Confidence 4 335577899999999988 56655532 11 25678899999999
Q ss_pred CeeeEEEc--CC-cceEEEEe
Q 023384 265 SHYKITPI--FG-MRFLIEIY 282 (283)
Q Consensus 265 ~~~~~~~~--~~-~~~~i~~~ 282 (283)
.+.+..-. .+ +.-+|.+.
T Consensus 142 ~i~~E~lv~e~~k~Yeii~~~ 162 (244)
T 3gnl_A 142 LITSEAILREDNKVYEIMVLA 162 (244)
T ss_dssp EEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEEEECCEEEEEEEEE
Confidence 98764322 33 45666654
No 146
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.29 E-value=1.5e-11 Score=96.88 Aligned_cols=113 Identities=14% Similarity=0.162 Sum_probs=88.4
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCCCCC--CceEEEecccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQFIP--PADAFLFKLVF 186 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~~~p--~~D~v~~~~vl 186 (283)
.....+|||+|||+|.++..+++ +..+++++|+ +.+++.+++ ..+++++.+|+.++++ .||+|++..+
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~~- 109 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDKLEFNKAFIGGT- 109 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGGCCCSEEEECSC-
T ss_pred CCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccCCCCcEEEECCc-
Confidence 55668999999999999999998 7889999999 777776664 2689999999987544 5999999887
Q ss_pred cCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCe
Q 023384 187 HGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSH 266 (283)
Q Consensus 187 h~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 266 (283)
.....+++++++. | ||.+++...... +..++.++++++||.+
T Consensus 110 -----~~~~~~l~~~~~~--~---gG~l~~~~~~~~----------------------------~~~~~~~~l~~~g~~~ 151 (183)
T 2yxd_A 110 -----KNIEKIIEILDKK--K---INHIVANTIVLE----------------------------NAAKIINEFESRGYNV 151 (183)
T ss_dssp -----SCHHHHHHHHHHT--T---CCEEEEEESCHH----------------------------HHHHHHHHHHHTTCEE
T ss_pred -----ccHHHHHHHHhhC--C---CCEEEEEecccc----------------------------cHHHHHHHHHHcCCeE
Confidence 2345778888888 7 688888763110 2466788999999866
Q ss_pred eeE
Q 023384 267 YKI 269 (283)
Q Consensus 267 ~~~ 269 (283)
..+
T Consensus 152 ~~~ 154 (183)
T 2yxd_A 152 DAV 154 (183)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 147
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.29 E-value=1.1e-11 Score=100.78 Aligned_cols=98 Identities=16% Similarity=0.181 Sum_probs=75.7
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC-C--CC--CceEEEeccc
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ-F--IP--PADAFLFKLV 185 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~--~p--~~D~v~~~~v 185 (283)
...+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ ..++.++.+|+.+ + ++ .+|.|++...
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 457899999999999999999999999999999 777776653 3579999999987 3 44 4898887543
Q ss_pred ccCCChh------HHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 186 FHGLGDE------DGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 186 lh~~~d~------~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
....... ....+|++++++|+| ||.+++..
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~Lkp---gG~l~~~t 153 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGK---GGSIHFKT 153 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTT---SCEEEEEE
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCC---CCEEEEEe
Confidence 3211110 024789999999999 78887754
No 148
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.28 E-value=1.1e-11 Score=104.89 Aligned_cols=124 Identities=15% Similarity=0.180 Sum_probs=93.9
Q ss_pred HHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHH-CCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCCCCC-
Q 023384 106 FVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEA-FPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQFIP- 175 (283)
Q Consensus 106 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~~~p- 175 (283)
.++. .++ .....+|||+|||+|.++..+++. .|..+++++|+ +..++.+++ .++++++.+|+.+.++
T Consensus 103 ~i~~-~~~--~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 179 (277)
T 1o54_A 103 FIAM-MLD--VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDE 179 (277)
T ss_dssp HHHH-HTT--CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSC
T ss_pred HHHH-HhC--CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccC
Confidence 4445 444 667789999999999999999999 68899999999 877776654 2589999999988544
Q ss_pred -CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHH
Q 023384 176 -PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESE 254 (283)
Q Consensus 176 -~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e 254 (283)
.||+|++ +.++. ..+|+++.++|+| ||.+++.+.... ..++
T Consensus 180 ~~~D~V~~-----~~~~~--~~~l~~~~~~L~p---gG~l~~~~~~~~----------------------------~~~~ 221 (277)
T 1o54_A 180 KDVDALFL-----DVPDP--WNYIDKCWEALKG---GGRFATVCPTTN----------------------------QVQE 221 (277)
T ss_dssp CSEEEEEE-----CCSCG--GGTHHHHHHHEEE---EEEEEEEESSHH----------------------------HHHH
T ss_pred CccCEEEE-----CCcCH--HHHHHHHHHHcCC---CCEEEEEeCCHH----------------------------HHHH
Confidence 4999998 33443 3779999999999 788887663210 1345
Q ss_pred HHHHHHHCCCCeeeEE
Q 023384 255 WAKLFFDACFSHYKIT 270 (283)
Q Consensus 255 ~~~ll~~aGf~~~~~~ 270 (283)
+.+.++++||+.+++.
T Consensus 222 ~~~~l~~~gf~~~~~~ 237 (277)
T 1o54_A 222 TLKKLQELPFIRIEVW 237 (277)
T ss_dssp HHHHHHHSSEEEEEEE
T ss_pred HHHHHHHCCCceeEEE
Confidence 6667778888776654
No 149
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.28 E-value=2.5e-12 Score=107.18 Aligned_cols=98 Identities=12% Similarity=0.126 Sum_probs=77.9
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC--C-CC---CceEE
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFP-GIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ--F-IP---PADAF 180 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~--~-~p---~~D~v 180 (283)
..+..+|||||||+|..+..+++.+| +.+++++|+ ++.++.+++ .++++++.+|+.+ + .+ .||+|
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 44568999999999999999999998 899999999 877776654 4689999999866 2 21 59999
Q ss_pred EecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 181 LFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 181 ~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
++.. +......+++++.+.|+| ||.+++-+...
T Consensus 141 ~~d~-----~~~~~~~~l~~~~~~Lkp---GG~lv~~~~~~ 173 (248)
T 3tfw_A 141 FIDA-----DKPNNPHYLRWALRYSRP---GTLIIGDNVVR 173 (248)
T ss_dssp EECS-----CGGGHHHHHHHHHHTCCT---TCEEEEECCSG
T ss_pred EECC-----chHHHHHHHHHHHHhcCC---CeEEEEeCCCc
Confidence 9854 344456789999999999 67766655433
No 150
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.28 E-value=1.6e-11 Score=109.53 Aligned_cols=103 Identities=15% Similarity=0.151 Sum_probs=81.6
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcC-------CC-----C---CCeEEEEcCCCC-C--C--
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANL-------PE-----A---DNLKYIAGDMFQ-F--I-- 174 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a-------~~-----~---~rv~~~~~d~~~-~--~-- 174 (283)
.....+|||||||+|.++..+++.++..+++++|+ +..++.| ++ . .+++++.+|.+. + +
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~ 319 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAE 319 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHH
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccccc
Confidence 56678999999999999999999988889999999 7666655 32 2 689999875543 2 2
Q ss_pred --CCceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCC
Q 023384 175 --PPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAE 224 (283)
Q Consensus 175 --p~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~ 224 (283)
..||+|++..+++ . ++....|+++.+.|+| ||++++.+.+.+..
T Consensus 320 ~~~~FDvIvvn~~l~--~-~d~~~~L~el~r~LKp---GG~lVi~d~f~p~~ 365 (433)
T 1u2z_A 320 LIPQCDVILVNNFLF--D-EDLNKKVEKILQTAKV---GCKIISLKSLRSLT 365 (433)
T ss_dssp HGGGCSEEEECCTTC--C-HHHHHHHHHHHTTCCT---TCEEEESSCSSCTT
T ss_pred ccCCCCEEEEeCccc--c-ccHHHHHHHHHHhCCC---CeEEEEeeccCCcc
Confidence 3599999987774 2 3455779999999999 89999998777654
No 151
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.27 E-value=8e-12 Score=103.16 Aligned_cols=100 Identities=20% Similarity=0.273 Sum_probs=79.5
Q ss_pred HHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCCCCC-
Q 023384 104 TSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQFIP- 175 (283)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~~~p- 175 (283)
...+++ .++ .....+|||||||+|.++..+++..+ .+++++|+ +..++.+++ ..++++..+|+..+++
T Consensus 80 ~~~~~~-~l~--~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 155 (235)
T 1jg1_A 80 VAIMLE-IAN--LKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPP 155 (235)
T ss_dssp HHHHHH-HHT--CCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG
T ss_pred HHHHHH-hcC--CCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCC
Confidence 344555 454 56778999999999999999999988 89999998 777776654 2469999999855544
Q ss_pred --CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 176 --PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 176 --~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
.||+|++..+++++.+ ++.+.|+| ||++++..
T Consensus 156 ~~~fD~Ii~~~~~~~~~~--------~~~~~L~p---gG~lvi~~ 189 (235)
T 1jg1_A 156 KAPYDVIIVTAGAPKIPE--------PLIEQLKI---GGKLIIPV 189 (235)
T ss_dssp GCCEEEEEECSBBSSCCH--------HHHHTEEE---EEEEEEEE
T ss_pred CCCccEEEECCcHHHHHH--------HHHHhcCC---CcEEEEEE
Confidence 3999999999998765 57789999 68777754
No 152
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.27 E-value=3e-11 Score=101.36 Aligned_cols=99 Identities=11% Similarity=0.216 Sum_probs=75.8
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEEcCCCCC--------CC-
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----------ADNLKYIAGDMFQF--------IP- 175 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~rv~~~~~d~~~~--------~p- 175 (283)
.....+|||+|||+|.++..+++++|..+++++|+ +.+++.+++ .++++++.+|+.+. ++
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 34567999999999999999999999999999999 777765543 23699999999874 22
Q ss_pred -CceEEEecccccC----------------CChhHHHHHHHHHHHhhccCCCCcEEEEE
Q 023384 176 -PADAFLFKLVFHG----------------LGDEDGLKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 176 -~~D~v~~~~vlh~----------------~~d~~~~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
.||+|++.-.++. ........+++.+.+.|+| ||+++++
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~ 169 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVS---GGQLSLI 169 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEE---EEEEEEE
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCC---CCEEEEE
Confidence 4999999733322 2222356889999999999 7888774
No 153
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.26 E-value=7e-12 Score=102.42 Aligned_cols=98 Identities=11% Similarity=0.103 Sum_probs=75.4
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC--C--CC--CceEEEecc
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ--F--IP--PADAFLFKL 184 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~--~--~p--~~D~v~~~~ 184 (283)
...+|||||||+|.++..+++.+|+.+++++|+ +++++.+++ ..+++++.+|..+ + ++ .+|.|++..
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 457999999999999999999999999999999 777766543 3579999999766 2 44 499998874
Q ss_pred cccCCChhHH------HHHHHHHHHhhccCCCCcEEEEEe
Q 023384 185 VFHGLGDEDG------LKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 185 vlh~~~d~~~------~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
.......... ..+++.++++||| ||.+++..
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~Lkp---GG~l~i~t 150 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQL---GGVFHMAT 150 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEE---EEEEEEEE
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCC---CcEEEEEe
Confidence 4332222111 2489999999999 78877654
No 154
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.26 E-value=2.6e-11 Score=99.22 Aligned_cols=98 Identities=11% Similarity=0.093 Sum_probs=77.6
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCCC---C------CCc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFP-GIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQF---I------PPA 177 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~~---~------p~~ 177 (283)
.....+|||||||+|..+..+++.+| +.+++++|+ +..++.+++ .++++++.+|..+. . ..|
T Consensus 62 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 62 LMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQY 141 (225)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred hhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCc
Confidence 34557999999999999999999998 889999999 777776654 36799999998662 1 459
Q ss_pred eEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 178 DAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 178 D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
|+|++.. +......+++++.+.|+| ||.+++.+...
T Consensus 142 D~v~~~~-----~~~~~~~~l~~~~~~L~p---gG~lv~~~~~~ 177 (225)
T 3tr6_A 142 DLIYIDA-----DKANTDLYYEESLKLLRE---GGLIAVDNVLR 177 (225)
T ss_dssp EEEEECS-----CGGGHHHHHHHHHHHEEE---EEEEEEECSSG
T ss_pred cEEEECC-----CHHHHHHHHHHHHHhcCC---CcEEEEeCCCc
Confidence 9999644 234456889999999999 67777665544
No 155
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.25 E-value=1.3e-11 Score=101.67 Aligned_cols=96 Identities=13% Similarity=0.253 Sum_probs=76.7
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCCCC-----CCceEEEe
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQFI-----PPADAFLF 182 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~~~-----p~~D~v~~ 182 (283)
..+..+|||||||+|..+..+++.+|..+++++|+ +.+++.+++ .++++++.+|+.+.. ..||+|++
T Consensus 69 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 148 (232)
T 3ntv_A 69 MNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFI 148 (232)
T ss_dssp HHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEE
T ss_pred hcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEE
Confidence 44568999999999999999999889999999999 888777664 358999999998732 24999997
Q ss_pred cccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 183 KLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 183 ~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
... ......+++++.+.|+| ||.+++-+.
T Consensus 149 ~~~-----~~~~~~~l~~~~~~Lkp---gG~lv~d~~ 177 (232)
T 3ntv_A 149 DAA-----KAQSKKFFEIYTPLLKH---QGLVITDNV 177 (232)
T ss_dssp ETT-----SSSHHHHHHHHGGGEEE---EEEEEEECT
T ss_pred cCc-----HHHHHHHHHHHHHhcCC---CeEEEEeeC
Confidence 542 33356789999999999 676655443
No 156
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.24 E-value=2.4e-11 Score=106.24 Aligned_cols=95 Identities=18% Similarity=0.186 Sum_probs=75.5
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEEcCCCC-CCC--CceEEEecccc
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPE-------ADNLKYIAGDMFQ-FIP--PADAFLFKLVF 186 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~rv~~~~~d~~~-~~p--~~D~v~~~~vl 186 (283)
....+|||||||+|.++..++++ +..+++++|+.++++.+++ .++++++.+|+.+ ++| .||+|++..+.
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred CCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 45589999999999999999987 6679999999656666553 4679999999998 666 49999987654
Q ss_pred cCC-ChhHHHHHHHHHHHhhccCCCCcEEE
Q 023384 187 HGL-GDEDGLKILKKRRAAIASNGERGKVI 215 (283)
Q Consensus 187 h~~-~d~~~~~iL~~~~~~L~p~~~gg~ll 215 (283)
|.+ ..+....+++.+.+.|+| ||.++
T Consensus 144 ~~l~~~~~~~~~l~~~~r~Lkp---gG~li 170 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAP---DGLIF 170 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEE---EEEEE
T ss_pred ccccCchhHHHHHHHHHHhCCC---CCEEc
Confidence 443 223456789999999999 67765
No 157
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.24 E-value=2.4e-11 Score=100.88 Aligned_cols=97 Identities=13% Similarity=0.158 Sum_probs=76.7
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC--C-C------CCce
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFP-GIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ--F-I------PPAD 178 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~--~-~------p~~D 178 (283)
.+..+|||||||+|..+..+++.+| +.+++++|+ ++.++.+++ .++++++.+|..+ + . ..||
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 4558999999999999999999986 889999999 777766654 4689999999876 2 2 3599
Q ss_pred EEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 179 AFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 179 ~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
+|++... ......+++++.+.|+| ||.+++-+...
T Consensus 139 ~V~~d~~-----~~~~~~~l~~~~~~Lkp---GG~lv~d~~~~ 173 (242)
T 3r3h_A 139 FIFIDAD-----KTNYLNYYELALKLVTP---KGLIAIDNIFW 173 (242)
T ss_dssp EEEEESC-----GGGHHHHHHHHHHHEEE---EEEEEEECSSS
T ss_pred EEEEcCC-----hHHhHHHHHHHHHhcCC---CeEEEEECCcc
Confidence 9988643 34456789999999999 66666655444
No 158
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.24 E-value=3.4e-11 Score=97.79 Aligned_cols=93 Identities=15% Similarity=0.150 Sum_probs=77.3
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCCCCC---CceEEEecc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAF-PGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQFIP---PADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~~~p---~~D~v~~~~ 184 (283)
.....+|||||||+|.++..+++.. |+.+++++|+ +..++.+++ ..++++..+|+..+.+ .||+|++..
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 154 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTA 154 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESS
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECC
Confidence 5667899999999999999999987 7789999999 777777654 2579999999876443 499999999
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
++|++.+ ++.+.|+| ||++++...
T Consensus 155 ~~~~~~~--------~~~~~L~p---gG~lv~~~~ 178 (215)
T 2yxe_A 155 AGPKIPE--------PLIRQLKD---GGKLLMPVG 178 (215)
T ss_dssp BBSSCCH--------HHHHTEEE---EEEEEEEES
T ss_pred chHHHHH--------HHHHHcCC---CcEEEEEEC
Confidence 9998873 67889999 788877653
No 159
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.24 E-value=5.9e-12 Score=103.57 Aligned_cols=135 Identities=12% Similarity=0.036 Sum_probs=99.0
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCC-CCC-CceEEEecccccC
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQ-FIP-PADAFLFKLVFHG 188 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~-~~p-~~D~v~~~~vlh~ 188 (283)
....+|||||||.|-++..++...|..+++++|+ +.+++.+++ ..+.++...|+.. +.+ .||++++.-++|+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~lkti~~ 210 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTLPC 210 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEETTCHHH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHHHHHHH
Confidence 5578999999999999999999999999999999 777776664 5568899999998 444 4999999999999
Q ss_pred CChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCeee
Q 023384 189 LGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYK 268 (283)
Q Consensus 189 ~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 268 (283)
+.++.....+ ++.++|+| +|.++-.+. ..=.+..+ +-.+.-.++|++.+.+.|+.+.+
T Consensus 211 Le~q~kg~g~-~ll~aL~~---~~vvVSfp~-ksl~Grs~-----------------gm~~~Y~~~~e~~~~~~g~~~~~ 268 (281)
T 3lcv_B 211 LETQQRGSGW-EVIDIVNS---PNIVVTFPT-KSLGQRSK-----------------GMFQNYSQSFESQARERSCRIQR 268 (281)
T ss_dssp HHHHSTTHHH-HHHHHSSC---SEEEEEEEC-C------------------------CHHHHHHHHHHHHHHHHTCCEEE
T ss_pred hhhhhhHHHH-HHHHHhCC---CCEEEeccc-hhhcCCCc-----------------chhhHHHHHHHHHHHhcCCceee
Confidence 9988766777 89999999 444444443 11111110 00011257899999999985443
Q ss_pred EEEcCC
Q 023384 269 ITPIFG 274 (283)
Q Consensus 269 ~~~~~~ 274 (283)
...++
T Consensus 269 -~~~~n 273 (281)
T 3lcv_B 269 -LEIGN 273 (281)
T ss_dssp -EEETT
T ss_pred -eeecC
Confidence 44443
No 160
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.23 E-value=5.8e-11 Score=104.82 Aligned_cols=96 Identities=16% Similarity=0.197 Sum_probs=80.5
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCC-CCC--CceEEEecccccC
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQ-FIP--PADAFLFKLVFHG 188 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~-~~p--~~D~v~~~~vlh~ 188 (283)
...+|||+|||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+.+ ..+ .||+|++...+|+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCT
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhh
Confidence 5579999999999999999987 569999999 777877664 3358999999998 444 5999999999987
Q ss_pred ---CChhHHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 189 ---LGDEDGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 189 ---~~d~~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
...+...++++++++.|+| ||.++++.
T Consensus 311 ~~~~~~~~~~~~l~~~~~~Lkp---GG~l~iv~ 340 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLRP---GGVFFLVS 340 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred cccccHHHHHHHHHHHHHhcCc---CcEEEEEE
Confidence 3456677999999999999 78888764
No 161
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.23 E-value=4.4e-11 Score=96.75 Aligned_cols=99 Identities=12% Similarity=0.130 Sum_probs=79.3
Q ss_pred HHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCCCC---
Q 023384 105 SFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQFI--- 174 (283)
Q Consensus 105 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~~~--- 174 (283)
..+++ .++ .....+|||||||+|.++..+++. ..+++++|+ +..++.+++ ..+++++.+|..+..
T Consensus 67 ~~~~~-~l~--~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 141 (210)
T 3lbf_A 67 ARMTE-LLE--LTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQAR 141 (210)
T ss_dssp HHHHH-HTT--CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGG
T ss_pred HHHHH-hcC--CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccC
Confidence 33444 444 567789999999999999999998 679999999 777776654 357999999998832
Q ss_pred CCceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 175 PPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 175 p~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
..||+|++..++|++++ ++.+.|+| ||++++.-.
T Consensus 142 ~~~D~i~~~~~~~~~~~--------~~~~~L~p---gG~lv~~~~ 175 (210)
T 3lbf_A 142 APFDAIIVTAAPPEIPT--------ALMTQLDE---GGILVLPVG 175 (210)
T ss_dssp CCEEEEEESSBCSSCCT--------HHHHTEEE---EEEEEEEEC
T ss_pred CCccEEEEccchhhhhH--------HHHHhccc---CcEEEEEEc
Confidence 24999999999998886 47889999 788777554
No 162
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.23 E-value=4.2e-11 Score=97.89 Aligned_cols=98 Identities=12% Similarity=0.155 Sum_probs=77.4
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCCC---C-----CCce
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFP-GIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQF---I-----PPAD 178 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~~---~-----p~~D 178 (283)
.....+|||||||+|..+..+++.+| +.+++++|+ +..++.+++ .++++++.+|..+. + ..||
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 44568999999999999999999998 789999999 877776653 45799999998762 1 3499
Q ss_pred EEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 179 AFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 179 ~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
+|++... ......+++++.+.|+| ||.+++-+...
T Consensus 136 ~v~~d~~-----~~~~~~~l~~~~~~L~p---gG~lv~~~~~~ 170 (223)
T 3duw_A 136 FIFIDAD-----KQNNPAYFEWALKLSRP---GTVIIGDNVVR 170 (223)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHTCCT---TCEEEEESCSG
T ss_pred EEEEcCC-----cHHHHHHHHHHHHhcCC---CcEEEEeCCCc
Confidence 9988554 33456889999999999 67666655443
No 163
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.23 E-value=8.3e-11 Score=102.46 Aligned_cols=96 Identities=21% Similarity=0.225 Sum_probs=74.9
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEEcCCCC-CCC--CceEEEeccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPE-------ADNLKYIAGDMFQ-FIP--PADAFLFKLV 185 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~rv~~~~~d~~~-~~p--~~D~v~~~~v 185 (283)
.....+|||||||+|.++..++++ +..+++++|+.++++.+++ .++++++.+|+.+ +++ .||+|++..+
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWM 140 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCC
T ss_pred hcCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCc
Confidence 456689999999999999998887 4568999999557666654 3789999999998 666 4999998763
Q ss_pred ccCC-ChhHHHHHHHHHHHhhccCCCCcEEE
Q 023384 186 FHGL-GDEDGLKILKKRRAAIASNGERGKVI 215 (283)
Q Consensus 186 lh~~-~d~~~~~iL~~~~~~L~p~~~gg~ll 215 (283)
.+.+ .......+|+++.+.|+| ||.++
T Consensus 141 ~~~l~~~~~~~~~l~~~~~~Lkp---gG~li 168 (340)
T 2fyt_A 141 GYFLLFESMLDSVLYAKNKYLAK---GGSVY 168 (340)
T ss_dssp BTTBTTTCHHHHHHHHHHHHEEE---EEEEE
T ss_pred hhhccCHHHHHHHHHHHHhhcCC---CcEEE
Confidence 2222 223455789999999999 67766
No 164
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.22 E-value=3.2e-11 Score=102.05 Aligned_cols=139 Identities=12% Similarity=0.057 Sum_probs=91.0
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcC-CCCCCeEEEE-cCCCC----CCC--CceEEEecccccC
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANL-PEADNLKYIA-GDMFQ----FIP--PADAFLFKLVFHG 188 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a-~~~~rv~~~~-~d~~~----~~p--~~D~v~~~~vlh~ 188 (283)
...+|||||||||.++..+++. +..+++++|+ +++++.+ ++..++.... .|+.. .+| .||++++..++|+
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~s 163 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFIS 163 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSC
T ss_pred cccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHhh
Confidence 4579999999999999988886 5568999999 7777653 3345654433 23322 133 3999999888885
Q ss_pred CChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccc-cCCccCCHHHHHHHHHHCCCCee
Q 023384 189 LGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVN-ATGKERTESEWAKLFFDACFSHY 267 (283)
Q Consensus 189 ~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~t~~e~~~ll~~aGf~~~ 267 (283)
+ ..+|++++++|+| ||+++++- .|.....+ ...+..-... ..-..+..+++.++++++||++.
T Consensus 164 l-----~~vL~e~~rvLkp---GG~lv~lv--kPqfe~~~------~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~ 227 (291)
T 3hp7_A 164 L-----NLILPALAKILVD---GGQVVALV--KPQFEAGR------EQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVK 227 (291)
T ss_dssp G-----GGTHHHHHHHSCT---TCEEEEEE--CGGGTSCG------GGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred H-----HHHHHHHHHHcCc---CCEEEEEE--CcccccCh------hhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEE
Confidence 5 4779999999999 79988862 22111110 0000000000 00112367899999999999998
Q ss_pred eEEEcC
Q 023384 268 KITPIF 273 (283)
Q Consensus 268 ~~~~~~ 273 (283)
.+...+
T Consensus 228 ~~~~sp 233 (291)
T 3hp7_A 228 GLDFSP 233 (291)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 876653
No 165
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.22 E-value=7.2e-11 Score=94.00 Aligned_cols=99 Identities=12% Similarity=0.038 Sum_probs=78.7
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC-C--C--CCceEEEecc
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ-F--I--PPADAFLFKL 184 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~--~--p~~D~v~~~~ 184 (283)
....+|||+|||+|.++..+++. +..+++++|+ +++++.+++ .++++++.+|+.+ . . ..||+|++..
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECC
Confidence 35689999999999999987774 5668999999 888877765 3589999999987 2 3 2599999988
Q ss_pred cccCCChhHHHHHHHHHHH--hhccCCCCcEEEEEeee
Q 023384 185 VFHGLGDEDGLKILKKRRA--AIASNGERGKVIIIDIV 220 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~--~L~p~~~gg~lli~d~~ 220 (283)
.+|+. .++..++++.+.+ .|+| ||.+++....
T Consensus 122 p~~~~-~~~~~~~l~~~~~~~~L~p---gG~l~~~~~~ 155 (189)
T 3p9n_A 122 PYNVD-SADVDAILAALGTNGWTRE---GTVAVVERAT 155 (189)
T ss_dssp CTTSC-HHHHHHHHHHHHHSSSCCT---TCEEEEEEET
T ss_pred CCCcc-hhhHHHHHHHHHhcCccCC---CeEEEEEecC
Confidence 87643 4556789999999 9999 6887775543
No 166
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.22 E-value=7.7e-11 Score=92.15 Aligned_cols=97 Identities=15% Similarity=0.210 Sum_probs=78.3
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHC-CCCeEEEeechHHHhcCCCCCCeEEEEcCCCC-C--------CC--CceEEEec
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAF-PGIKCTVLDLPHVVANLPEADNLKYIAGDMFQ-F--------IP--PADAFLFK 183 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~D~~~~~~~a~~~~rv~~~~~d~~~-~--------~p--~~D~v~~~ 183 (283)
.....+|||+|||+|.++..+++.+ |+.+++++|+.++++ ..+++++.+|+.+ + ++ .||+|++.
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~ 95 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDP----IVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSD 95 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCC----CTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECccccc----cCcEEEEEcccccchhhhhhhccCCCCceeEEEEC
Confidence 3556799999999999999999995 779999999955322 2689999999988 5 55 49999999
Q ss_pred ccccCCChhH---------HHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 184 LVFHGLGDED---------GLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 184 ~vlh~~~d~~---------~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
.++|...+.. ...+++++.+.|+| ||.+++...
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~---gG~l~~~~~ 137 (180)
T 1ej0_A 96 MAPNMSGTPAVDIPRAMYLVELALEMCRDVLAP---GGSFVVKVF 137 (180)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEEE
T ss_pred CCccccCCCccchHHHHHHHHHHHHHHHHHcCC---CcEEEEEEe
Confidence 9888765431 15889999999999 788877654
No 167
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.22 E-value=6.4e-11 Score=97.87 Aligned_cols=94 Identities=15% Similarity=0.144 Sum_probs=76.4
Q ss_pred CCCeEEEEcCCccHHHHHHHHH----CCCCeEEEeec-hHHHhcCCC-CCCeEEEEcCCCCC--C---C--CceEEEecc
Q 023384 118 GLGSLVDVGGGNGSLSRIISEA----FPGIKCTVLDL-PHVVANLPE-ADNLKYIAGDMFQF--I---P--PADAFLFKL 184 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~----~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~~--~---p--~~D~v~~~~ 184 (283)
...+|||||||+|..+..+++. .|+.+++++|+ +++++.++. ..+++++.+|..+. + + .||+|++..
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 3479999999999999999998 78999999999 777777754 57899999999873 2 2 499998866
Q ss_pred cccCCChhHHHHHHHHHHH-hhccCCCCcEEEEEee
Q 023384 185 VFHGLGDEDGLKILKKRRA-AIASNGERGKVIIIDI 219 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~-~L~p~~~gg~lli~d~ 219 (283)
. |. +...+|+++.+ .|+| ||.+++.+.
T Consensus 161 ~-~~----~~~~~l~~~~r~~Lkp---GG~lv~~d~ 188 (236)
T 2bm8_A 161 A-HA----NTFNIMKWAVDHLLEE---GDYFIIEDM 188 (236)
T ss_dssp S-CS----SHHHHHHHHHHHTCCT---TCEEEECSC
T ss_pred c-hH----hHHHHHHHHHHhhCCC---CCEEEEEeC
Confidence 4 52 34578999997 9999 788887664
No 168
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.21 E-value=2.5e-11 Score=101.08 Aligned_cols=99 Identities=17% Similarity=0.175 Sum_probs=79.7
Q ss_pred CCCeEEEEcCCccHHHHHHHHH--CCCCeEEEeec-hHHHhcCCC---CC-------C----------------------
Q 023384 118 GLGSLVDVGGGNGSLSRIISEA--FPGIKCTVLDL-PHVVANLPE---AD-------N---------------------- 162 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~--~p~~~~~~~D~-~~~~~~a~~---~~-------r---------------------- 162 (283)
...+|||+|||+|.++..+++. +|..+++++|+ +.+++.+++ .. +
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 4579999999999999999998 78889999999 888877663 22 2
Q ss_pred ---eE-------------EEEcCCCCCC-------C-CceEEEecccccCCCh-------hHHHHHHHHHHHhhccCCCC
Q 023384 163 ---LK-------------YIAGDMFQFI-------P-PADAFLFKLVFHGLGD-------EDGLKILKKRRAAIASNGER 211 (283)
Q Consensus 163 ---v~-------------~~~~d~~~~~-------p-~~D~v~~~~vlh~~~d-------~~~~~iL~~~~~~L~p~~~g 211 (283)
++ ++.+|++++. . .||+|++...++...+ +....++++++++|+| |
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---g 207 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPA---H 207 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCT---T
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCC---C
Confidence 67 9999999843 3 5999999876655432 5667899999999999 7
Q ss_pred cEEEEEee
Q 023384 212 GKVIIIDI 219 (283)
Q Consensus 212 g~lli~d~ 219 (283)
|.+++++.
T Consensus 208 G~l~~~~~ 215 (250)
T 1o9g_A 208 AVIAVTDR 215 (250)
T ss_dssp CEEEEEES
T ss_pred cEEEEeCc
Confidence 98888543
No 169
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.21 E-value=6.1e-11 Score=100.69 Aligned_cols=94 Identities=18% Similarity=0.243 Sum_probs=74.2
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCCCCC-Cc---eEEEec--
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQFIP-PA---DAFLFK-- 183 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~~~p-~~---D~v~~~-- 183 (283)
...+|||+|||+|.++..+++. |+.+++++|+ +.+++.+++ .++++|+.+|++++.+ .| |+|++.
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~~~f~~~D~IvsnPP 201 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPP 201 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGGTTTCCEEEECCC
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcccccCCCCEEEEcCC
Confidence 4579999999999999999999 9999999999 888877664 3479999999998554 48 999996
Q ss_pred ----------ccccCCCh------hHHHHHHHHHH-HhhccCCCCcEEEE
Q 023384 184 ----------LVFHGLGD------EDGLKILKKRR-AAIASNGERGKVII 216 (283)
Q Consensus 184 ----------~vlh~~~d------~~~~~iL~~~~-~~L~p~~~gg~lli 216 (283)
.+. +.+. ++...+++++. +.++| ||.+++
T Consensus 202 yi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~p---gG~l~~ 247 (284)
T 1nv8_A 202 YVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTS---GKIVLM 247 (284)
T ss_dssp CBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCT---TCEEEE
T ss_pred CCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCC---CCEEEE
Confidence 233 2222 11237899999 99999 677665
No 170
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.21 E-value=1.1e-10 Score=93.58 Aligned_cols=94 Identities=21% Similarity=0.227 Sum_probs=73.3
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCC--CCeEEEeechHHHhcCCCCCCeEEEEcCCCC-C-------------------
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFP--GIKCTVLDLPHVVANLPEADNLKYIAGDMFQ-F------------------- 173 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p--~~~~~~~D~~~~~~~a~~~~rv~~~~~d~~~-~------------------- 173 (283)
+....+|||||||+|.++..+++.+| +.+++++|+.+. ....+++++.+|+.+ +
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~----~~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~ 95 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIM----DPIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVD 95 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCC----CCCTTCEEEECCTTTTSSCCC-----------CHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCcc----CCCCCceEEEccccchhhhhhccccccccccchhhH
Confidence 35567999999999999999999998 689999999542 124579999999987 4
Q ss_pred ------CC--CceEEEecccccCCC----hhH-----HHHHHHHHHHhhccCCCCcEEEE
Q 023384 174 ------IP--PADAFLFKLVFHGLG----DED-----GLKILKKRRAAIASNGERGKVII 216 (283)
Q Consensus 174 ------~p--~~D~v~~~~vlh~~~----d~~-----~~~iL~~~~~~L~p~~~gg~lli 216 (283)
++ .||+|++...+|... +.. ...+|++++++|+| ||.+++
T Consensus 96 ~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lkp---gG~lv~ 152 (201)
T 2plw_A 96 YKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINI---GGTYIV 152 (201)
T ss_dssp HHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEE
T ss_pred HHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccC---CCEEEE
Confidence 34 499999988777532 211 13479999999999 787766
No 171
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.20 E-value=9.6e-11 Score=98.51 Aligned_cols=93 Identities=15% Similarity=0.197 Sum_probs=77.9
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEcCCCC-CCC--CceEEEecccccCCCh
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAGDMFQ-FIP--PADAFLFKLVFHGLGD 191 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~-~~p--~~D~v~~~~vlh~~~d 191 (283)
....+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ ..++.+..+|+.+ +++ .||+|++..+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~----- 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP----- 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC-----
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh-----
Confidence 4568999999999999999999999899999999 778877765 5678999999987 554 49999986653
Q ss_pred hHHHHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 192 EDGLKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 192 ~~~~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
..+++++++|+| ||++++..+..
T Consensus 159 ----~~l~~~~~~L~p---gG~l~~~~~~~ 181 (269)
T 1p91_A 159 ----CKAEELARVVKP---GGWVITATPGP 181 (269)
T ss_dssp ----CCHHHHHHHEEE---EEEEEEEEECT
T ss_pred ----hhHHHHHHhcCC---CcEEEEEEcCH
Confidence 248899999999 79998887654
No 172
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.20 E-value=6.5e-11 Score=97.75 Aligned_cols=99 Identities=16% Similarity=0.202 Sum_probs=72.6
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCC------------CCCCeEEEEcCCCC--C--CC--Cc
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLP------------EADNLKYIAGDMFQ--F--IP--PA 177 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~------------~~~rv~~~~~d~~~--~--~p--~~ 177 (283)
....+|||||||+|.++..+++.+|+..++++|+ +.+++.++ ...++.++.+|+.+ + ++ .+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 3457899999999999999999999999999999 77765432 14689999999986 3 43 48
Q ss_pred eEEEecccccCCChh--H----HHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 178 DAFLFKLVFHGLGDE--D----GLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 178 D~v~~~~vlh~~~d~--~----~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
|.|++...-...... . ...+|++++++|+| ||.+++..
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~Lkp---GG~l~~~t 168 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRV---GGLVYTIT 168 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEE---EEEEEEEE
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCC---CCEEEEEe
Confidence 998874432211100 0 13689999999999 78887754
No 173
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.20 E-value=1.4e-11 Score=100.65 Aligned_cols=99 Identities=10% Similarity=0.146 Sum_probs=76.9
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC---CC------CCc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFP-GIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ---FI------PPA 177 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~---~~------p~~ 177 (283)
..+..+|||||||+|..+..+++.++ +.+++++|+ +.+++.+++ .++++++.+|+.+ .. ..|
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 56 EYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred hcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 34568999999999999999999875 889999999 888877664 3579999999744 22 259
Q ss_pred eEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 178 DAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 178 D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
|+|++....|++.+ ..++++.+ +.|+| ||.+++.+..
T Consensus 136 D~V~~d~~~~~~~~--~~~~~~~~-~~Lkp---gG~lv~~~~~ 172 (221)
T 3u81_A 136 DMVFLDHWKDRYLP--DTLLLEKC-GLLRK---GTVLLADNVI 172 (221)
T ss_dssp SEEEECSCGGGHHH--HHHHHHHT-TCCCT---TCEEEESCCC
T ss_pred EEEEEcCCcccchH--HHHHHHhc-cccCC---CeEEEEeCCC
Confidence 99999887776543 34667777 99999 6776664443
No 174
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.19 E-value=3.7e-11 Score=102.80 Aligned_cols=96 Identities=16% Similarity=0.272 Sum_probs=76.4
Q ss_pred CeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC---CCC--CceEEEeccccc
Q 023384 120 GSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ---FIP--PADAFLFKLVFH 187 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~---~~p--~~D~v~~~~vlh 187 (283)
.+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ ..|++++.+|..+ ..+ .||+|++....+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 4999999999999999999999999999999 888877764 4689999999876 233 499999865554
Q ss_pred CCChhH--HHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 188 GLGDED--GLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 188 ~~~d~~--~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
...... ...++++++++|+| ||.+++..
T Consensus 171 ~~~~~~L~t~efl~~~~r~Lkp---gGvlv~~~ 200 (317)
T 3gjy_A 171 AITPQNFTTVEFFEHCHRGLAP---GGLYVANC 200 (317)
T ss_dssp SCCCGGGSBHHHHHHHHHHEEE---EEEEEEEE
T ss_pred cccchhhhHHHHHHHHHHhcCC---CcEEEEEe
Confidence 332222 25789999999999 67665544
No 175
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.19 E-value=5.4e-11 Score=97.93 Aligned_cols=96 Identities=10% Similarity=0.239 Sum_probs=78.2
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCCC---C---CCceEEE
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQF---I---PPADAFL 181 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~~---~---p~~D~v~ 181 (283)
..+..+|||||||+|..+..+++.+|+.+++++|+ +..++.+++ ..+++++.+|+.+. . ..||+|+
T Consensus 52 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 131 (233)
T 2gpy_A 52 MAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLF 131 (233)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEE
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEE
Confidence 34567999999999999999999999999999999 777776654 35799999999872 2 2499999
Q ss_pred ecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 182 FKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 182 ~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
+....+ ....+|+++.+.|+| ||.+++.+.
T Consensus 132 ~~~~~~-----~~~~~l~~~~~~L~p---gG~lv~~~~ 161 (233)
T 2gpy_A 132 IDAAKG-----QYRRFFDMYSPMVRP---GGLILSDNV 161 (233)
T ss_dssp EEGGGS-----CHHHHHHHHGGGEEE---EEEEEEETT
T ss_pred ECCCHH-----HHHHHHHHHHHHcCC---CeEEEEEcC
Confidence 977654 345889999999999 677777543
No 176
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.19 E-value=3e-10 Score=96.75 Aligned_cols=98 Identities=14% Similarity=0.171 Sum_probs=72.3
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----------CCCeEEEEcCCCCCC---C-CceEE
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----------ADNLKYIAGDMFQFI---P-PADAF 180 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------~~rv~~~~~d~~~~~---p-~~D~v 180 (283)
++..+|||||||+|..+..+++..|..+++++|+ +.+++.+++ ..|++++.+|..+.+ + .||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 4568999999999999999999878889999999 888776653 358999999988732 2 49999
Q ss_pred EecccccCCChhHH--HHHHHHHHHhhccCCCCcEEEEE
Q 023384 181 LFKLVFHGLGDEDG--LKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 181 ~~~~vlh~~~d~~~--~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
++....+.-+.... ..+++.++++|+| ||.+++.
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~Lkp---gG~lv~~ 197 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNP---GGIFVAQ 197 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEE---EEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCC---CCEEEEe
Confidence 99554432222222 5789999999999 6766654
No 177
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.19 E-value=1.9e-11 Score=106.33 Aligned_cols=102 Identities=15% Similarity=0.209 Sum_probs=77.6
Q ss_pred HHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHH-CCCCeEEEeec-hHHHhcCCC-----------------CCCeEE
Q 023384 105 SFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEA-FPGIKCTVLDL-PHVVANLPE-----------------ADNLKY 165 (283)
Q Consensus 105 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~-----------------~~rv~~ 165 (283)
..++. .++ .....+|||+|||+|.++..+++. .|+.+++++|+ +..++.+++ ..++++
T Consensus 95 ~~~l~-~l~--~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~ 171 (336)
T 2b25_A 95 NMILS-MMD--INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDF 171 (336)
T ss_dssp HHHHH-HHT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEE
T ss_pred HHHHH-hcC--CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEE
Confidence 33455 444 667789999999999999999998 58899999999 777766543 268999
Q ss_pred EEcCCCCC---CC--CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 166 IAGDMFQF---IP--PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 166 ~~~d~~~~---~p--~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
+.+|+.+. ++ .||+|++.. ++.. .+++++.++|+| ||.+++...
T Consensus 172 ~~~d~~~~~~~~~~~~fD~V~~~~-----~~~~--~~l~~~~~~Lkp---gG~lv~~~~ 220 (336)
T 2b25_A 172 IHKDISGATEDIKSLTFDAVALDM-----LNPH--VTLPVFYPHLKH---GGVCAVYVV 220 (336)
T ss_dssp EESCTTCCC-------EEEEEECS-----SSTT--TTHHHHGGGEEE---EEEEEEEES
T ss_pred EECChHHcccccCCCCeeEEEECC-----CCHH--HHHHHHHHhcCC---CcEEEEEeC
Confidence 99999872 33 399999843 2222 368999999999 788887664
No 178
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.18 E-value=1.1e-10 Score=95.82 Aligned_cols=99 Identities=19% Similarity=0.206 Sum_probs=78.7
Q ss_pred HHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEEcCCCCCCC---C
Q 023384 105 SFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----ADNLKYIAGDMFQFIP---P 176 (283)
Q Consensus 105 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~rv~~~~~d~~~~~p---~ 176 (283)
..+++ .+. .....+|||||||+|.++..+++.. .+++++|+ +..++.+++ ..+++++.+|+.+..+ .
T Consensus 60 ~~~~~-~~~--~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~ 134 (231)
T 1vbf_A 60 IFMLD-ELD--LHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKP 134 (231)
T ss_dssp HHHHH-HTT--CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCC
T ss_pred HHHHH-hcC--CCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCC
Confidence 34444 444 5667899999999999999999986 78999999 777776654 2289999999987332 4
Q ss_pred ceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 177 ADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 177 ~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
||+|++..++|++.+ ++.+.|+| ||++++...
T Consensus 135 fD~v~~~~~~~~~~~--------~~~~~L~p---gG~l~~~~~ 166 (231)
T 1vbf_A 135 YDRVVVWATAPTLLC--------KPYEQLKE---GGIMILPIG 166 (231)
T ss_dssp EEEEEESSBBSSCCH--------HHHHTEEE---EEEEEEEEC
T ss_pred ccEEEECCcHHHHHH--------HHHHHcCC---CcEEEEEEc
Confidence 999999999998874 47789999 788887754
No 179
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.18 E-value=2.1e-10 Score=97.27 Aligned_cols=97 Identities=12% Similarity=0.129 Sum_probs=71.5
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec--hHHHhcCCC------------C----CCeEEEEcCCCCC---C-
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL--PHVVANLPE------------A----DNLKYIAGDMFQF---I- 174 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~--~~~~~~a~~------------~----~rv~~~~~d~~~~---~- 174 (283)
....+|||||||+|.++..+++. ...+++++|+ +.+++.+++ . +++++...|..+. +
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 45579999999999999988875 3458999999 455544322 1 4788886665442 2
Q ss_pred -----CCceEEEecccccCCChhHHHHHHHHHHHhhc---cCCCCcEEEEE
Q 023384 175 -----PPADAFLFKLVFHGLGDEDGLKILKKRRAAIA---SNGERGKVIII 217 (283)
Q Consensus 175 -----p~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~---p~~~gg~lli~ 217 (283)
..||+|++..++|+.++ ...+++.+.++|+ | .+||+++++
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~~~--~~~ll~~l~~~Lk~~~p-~~gG~l~v~ 204 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFHQA--HDALLRSVKMLLALPAN-DPTAVALVT 204 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCGGG--HHHHHHHHHHHBCCTTT-CTTCEEEEE
T ss_pred hhccCCCCCEEEEeCcccChHH--HHHHHHHHHHHhcccCC-CCCCEEEEE
Confidence 25999999999997655 4588999999999 7 335776663
No 180
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.17 E-value=6.6e-11 Score=96.79 Aligned_cols=91 Identities=8% Similarity=0.128 Sum_probs=71.8
Q ss_pred CeEEEEcCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------C-CCeEEEEcCCCC---CC-C-CceEEEecc
Q 023384 120 GSLVDVGGGNGSLSRIISEAFP-GIKCTVLDL-PHVVANLPE-------A-DNLKYIAGDMFQ---FI-P-PADAFLFKL 184 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~-~rv~~~~~d~~~---~~-p-~~D~v~~~~ 184 (283)
.+|||||||+|..+..+++.+| +.+++++|+ ++.++.+++ . ++++++.+|..+ .+ + .||+|++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~ 137 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQV 137 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcC
Confidence 3999999999999999999985 889999999 877776654 3 589999999876 23 2 499998864
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
.. .....+++++.+.|+| ||.+++-+
T Consensus 138 ~~-----~~~~~~l~~~~~~Lkp---GG~lv~dn 163 (221)
T 3dr5_A 138 SP-----MDLKALVDAAWPLLRR---GGALVLAD 163 (221)
T ss_dssp CT-----TTHHHHHHHHHHHEEE---EEEEEETT
T ss_pred cH-----HHHHHHHHHHHHHcCC---CcEEEEeC
Confidence 32 2345789999999999 56555533
No 181
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.17 E-value=2.3e-11 Score=100.24 Aligned_cols=137 Identities=15% Similarity=0.041 Sum_probs=82.4
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEE--------EE-cCCCCCCCCceEEEecccc
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKY--------IA-GDMFQFIPPADAFLFKLVF 186 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~--------~~-~d~~~~~p~~D~v~~~~vl 186 (283)
...+|||||||+|.++..+++. ...+++++|+ +++++.+.+ ..++.. .. .|+..+ .+|.+.+..++
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~D~v~ 113 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQG--RPSFTSIDVSF 113 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSC--CCSEEEECCSS
T ss_pred CCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcC--CCCEEEEEEEh
Confidence 4569999999999999999987 3349999999 777665432 333332 22 222211 13554444444
Q ss_pred cCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccc-cCCccCCHHHHHHHHHHCCCC
Q 023384 187 HGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVN-ATGKERTESEWAKLFFDACFS 265 (283)
Q Consensus 187 h~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~t~~e~~~ll~~aGf~ 265 (283)
..+ ..+|++++++|+| ||.++++. .+...... ....-.-... ......+.+++.++++++||+
T Consensus 114 ~~l-----~~~l~~i~rvLkp---gG~lv~~~--~p~~e~~~------~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~ 177 (232)
T 3opn_A 114 ISL-----DLILPPLYEILEK---NGEVAALI--KPQFEAGR------EQVGKNGIIRDPKVHQMTIEKVLKTATQLGFS 177 (232)
T ss_dssp SCG-----GGTHHHHHHHSCT---TCEEEEEE--CHHHHSCH------HHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEE
T ss_pred hhH-----HHHHHHHHHhccC---CCEEEEEE--CcccccCH------HHhCcCCeecCcchhHHHHHHHHHHHHHCCCE
Confidence 433 4789999999999 78888842 11100000 0000000000 001123778999999999999
Q ss_pred eeeEEEcC
Q 023384 266 HYKITPIF 273 (283)
Q Consensus 266 ~~~~~~~~ 273 (283)
+..+...+
T Consensus 178 v~~~~~~p 185 (232)
T 3opn_A 178 VKGLTFSP 185 (232)
T ss_dssp EEEEEECS
T ss_pred EEEEEEcc
Confidence 98876543
No 182
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.17 E-value=6.2e-11 Score=104.70 Aligned_cols=100 Identities=15% Similarity=0.108 Sum_probs=78.2
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEEcCCCC-CCC-CceEEEecccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPE-------ADNLKYIAGDMFQ-FIP-PADAFLFKLVF 186 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~rv~~~~~d~~~-~~p-~~D~v~~~~vl 186 (283)
.....+|||||||+|.++..++++. ..+++++|+.++++.+++ .++++++.+|+.+ +++ .||+|++..+.
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWMG 139 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCCB
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEEcChh
Confidence 4556899999999999999999873 348999999766655543 4679999999988 665 59999997766
Q ss_pred cCCCh-hHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 187 HGLGD-EDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 187 h~~~d-~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
|.... .....+++.+.+.|+| ||.+++.+.
T Consensus 140 ~~l~~e~~~~~~l~~~~~~Lkp---gG~li~~~~ 170 (376)
T 3r0q_C 140 YFLLRESMFDSVISARDRWLKP---TGVMYPSHA 170 (376)
T ss_dssp TTBTTTCTHHHHHHHHHHHEEE---EEEEESSEE
T ss_pred hcccchHHHHHHHHHHHhhCCC---CeEEEEecC
Confidence 66543 3356789999999999 677765443
No 183
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.16 E-value=7.6e-11 Score=96.68 Aligned_cols=98 Identities=8% Similarity=0.080 Sum_probs=77.3
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCCC---C------CCc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFP-GIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQF---I------PPA 177 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~~---~------p~~ 177 (283)
.....+|||||||+|..+..+++.+| ..+++++|+ +..++.+++ .++++++.+|+.+. + ..|
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 45668999999999999999999987 789999999 777776654 36899999998652 2 459
Q ss_pred eEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 178 DAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 178 D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
|+|++... ......+++++.+.|+| ||.+++.+...
T Consensus 147 D~v~~d~~-----~~~~~~~l~~~~~~L~p---gG~lv~~~~~~ 182 (229)
T 2avd_A 147 DVAVVDAD-----KENCSAYYERCLQLLRP---GGILAVLRVLW 182 (229)
T ss_dssp EEEEECSC-----STTHHHHHHHHHHHEEE---EEEEEEECCSG
T ss_pred cEEEECCC-----HHHHHHHHHHHHHHcCC---CeEEEEECCCc
Confidence 99998543 33456889999999999 67776655443
No 184
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.16 E-value=1.4e-10 Score=100.63 Aligned_cols=95 Identities=18% Similarity=0.222 Sum_probs=74.1
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEEcCCCC-CCC--CceEEEecccc
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPE-------ADNLKYIAGDMFQ-FIP--PADAFLFKLVF 186 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~rv~~~~~d~~~-~~p--~~D~v~~~~vl 186 (283)
....+|||||||+|.++..++++ +..+++++|+.++++.+++ .++++++.+|+.+ ++| .||+|++..+.
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMG 115 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCB
T ss_pred cCCCEEEEecCccHHHHHHHHHC-CCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCch
Confidence 34579999999999999988876 5568999999656665543 4689999999998 666 49999988655
Q ss_pred cCCC-hhHHHHHHHHHHHhhccCCCCcEEE
Q 023384 187 HGLG-DEDGLKILKKRRAAIASNGERGKVI 215 (283)
Q Consensus 187 h~~~-d~~~~~iL~~~~~~L~p~~~gg~ll 215 (283)
+.+. ......+|+.+.+.|+| ||.++
T Consensus 116 ~~l~~~~~~~~~l~~~~~~Lkp---gG~li 142 (328)
T 1g6q_1 116 YFLLYESMMDTVLYARDHYLVE---GGLIF 142 (328)
T ss_dssp TTBSTTCCHHHHHHHHHHHEEE---EEEEE
T ss_pred hhcccHHHHHHHHHHHHhhcCC---CeEEE
Confidence 4432 23345789999999999 67765
No 185
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.16 E-value=2e-10 Score=99.04 Aligned_cols=103 Identities=11% Similarity=0.120 Sum_probs=78.1
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC-C-CC-CceEEEec-
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFP-GIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ-F-IP-PADAFLFK- 183 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~-~p-~~D~v~~~- 183 (283)
.....+|||+|||+|..+..+++..+ ..+++++|+ +..++.+++ ..+++++.+|+.+ + .+ .||+|++.
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~ 195 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDA 195 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEEC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeC
Confidence 56678999999999999999999975 489999999 777766654 3479999999987 3 23 59999983
Q ss_pred -----ccccC-------CChhH-------HHHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 184 -----LVFHG-------LGDED-------GLKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 184 -----~vlh~-------~~d~~-------~~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
.+++. |+.++ ..++|+++.+.||| ||++++.....
T Consensus 196 Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~Lkp---GG~lv~stcs~ 249 (315)
T 1ixk_A 196 PCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKP---GGILVYSTCSL 249 (315)
T ss_dssp CTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEESCC
T ss_pred CCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCC---CCEEEEEeCCC
Confidence 23433 22222 15889999999999 78887766433
No 186
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.15 E-value=1.5e-10 Score=99.93 Aligned_cols=101 Identities=13% Similarity=0.245 Sum_probs=80.3
Q ss_pred HHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCCCC--
Q 023384 105 SFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFP-GIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQFI-- 174 (283)
Q Consensus 105 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~~~-- 174 (283)
..+++ .+. .....+|||||||+|.++..+++..+ +.+++++|+ +++++.+++ ..+++++.+|+.+..
T Consensus 65 ~~l~~-~l~--~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~ 141 (317)
T 1dl5_A 65 ALFME-WVG--LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPE 141 (317)
T ss_dssp HHHHH-HTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG
T ss_pred HHHHH-hcC--CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcccc
Confidence 33444 444 56678999999999999999999987 488999999 888776654 256999999998732
Q ss_pred -CCceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 175 -PPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 175 -p~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
..||+|++..++|++. +++.+.|+| ||++++...
T Consensus 142 ~~~fD~Iv~~~~~~~~~--------~~~~~~Lkp---gG~lvi~~~ 176 (317)
T 1dl5_A 142 FSPYDVIFVTVGVDEVP--------ETWFTQLKE---GGRVIVPIN 176 (317)
T ss_dssp GCCEEEEEECSBBSCCC--------HHHHHHEEE---EEEEEEEBC
T ss_pred CCCeEEEEEcCCHHHHH--------HHHHHhcCC---CcEEEEEEC
Confidence 2499999999999887 457789999 788887643
No 187
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.15 E-value=6.3e-11 Score=92.37 Aligned_cols=93 Identities=13% Similarity=0.155 Sum_probs=70.9
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCCCCC-------CceEEEecc
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQFIP-------PADAFLFKL 184 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~~~p-------~~D~v~~~~ 184 (283)
...+|||+|||+|.++..+++..+. ++++|+ +.+++.+++ ..+++++.+|+.+..+ .||+|++..
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE--AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE--EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 5689999999999999999998765 999999 888877764 2289999999876211 599999998
Q ss_pred cccCCChhHHHHHHHHHH--HhhccCCCCcEEEEEee
Q 023384 185 VFHGLGDEDGLKILKKRR--AAIASNGERGKVIIIDI 219 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~--~~L~p~~~gg~lli~d~ 219 (283)
.+| -..+ .+++.+. +.|+| ||.+++...
T Consensus 119 ~~~-~~~~---~~~~~~~~~~~L~~---gG~~~~~~~ 148 (171)
T 1ws6_A 119 PYA-MDLA---ALFGELLASGLVEA---GGLYVLQHP 148 (171)
T ss_dssp CTT-SCTT---HHHHHHHHHTCEEE---EEEEEEEEE
T ss_pred CCc-hhHH---HHHHHHHhhcccCC---CcEEEEEeC
Confidence 877 2223 3445555 99999 677666543
No 188
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.15 E-value=2.1e-10 Score=93.49 Aligned_cols=95 Identities=11% Similarity=0.017 Sum_probs=78.6
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCC-CCC-CceEEEecccccC
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQ-FIP-PADAFLFKLVFHG 188 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~-~~p-~~D~v~~~~vlh~ 188 (283)
....+|||||||+|-++..+. |..+++++|+ +.+++.+++ ..+..+...|... +.| .||++++.-++|+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLllk~lh~ 180 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIFKLLPL 180 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEESCHHH
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHHHHHHH
Confidence 457899999999999999877 8999999999 888877765 5678899999998 555 4999999999999
Q ss_pred CChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 189 LGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 189 ~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
+.+++....+ ++.++|++ ++++|.=+
T Consensus 181 LE~q~~~~~~-~ll~aL~~----~~vvVsfP 206 (253)
T 3frh_A 181 LEREQAGSAM-ALLQSLNT----PRMAVSFP 206 (253)
T ss_dssp HHHHSTTHHH-HHHHHCBC----SEEEEEEE
T ss_pred hhhhchhhHH-HHHHHhcC----CCEEEEcC
Confidence 9887766666 88999998 45555443
No 189
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.14 E-value=4.6e-11 Score=104.58 Aligned_cols=95 Identities=18% Similarity=0.129 Sum_probs=74.4
Q ss_pred CCCCeEEEEcCC------ccHHHHHHHHH-CCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCC-CCC--------CceE
Q 023384 117 EGLGSLVDVGGG------NGSLSRIISEA-FPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQ-FIP--------PADA 179 (283)
Q Consensus 117 ~~~~~vlDvGgG------~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~-~~p--------~~D~ 179 (283)
....+||||||| +|..+..++++ +|+.+++++|+ +.+. ....+++|+.+|+.+ ++. .||+
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDl 291 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---VDELRIRTIQGDQNDAEFLDRIARRYGPFDI 291 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---GCBTTEEEEECCTTCHHHHHHHHHHHCCEEE
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---hcCCCcEEEEecccccchhhhhhcccCCccE
Confidence 345899999999 77777777765 69999999999 5553 235799999999988 443 4999
Q ss_pred EEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 180 FLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 180 v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
|++. ..|++.+ ..+.|++++++||| ||.+++.|..
T Consensus 292 Visd-gsH~~~d--~~~aL~el~rvLKP---GGvlVi~Dl~ 326 (419)
T 3sso_A 292 VIDD-GSHINAH--VRTSFAALFPHVRP---GGLYVIEDMW 326 (419)
T ss_dssp EEEC-SCCCHHH--HHHHHHHHGGGEEE---EEEEEEECGG
T ss_pred EEEC-Ccccchh--HHHHHHHHHHhcCC---CeEEEEEecc
Confidence 9876 4576544 46889999999999 7877777754
No 190
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.13 E-value=3.2e-10 Score=95.78 Aligned_cols=98 Identities=16% Similarity=0.133 Sum_probs=74.7
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEEcCCCC--C-CC-CceEEE
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----------ADNLKYIAGDMFQ--F-IP-PADAFL 181 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~rv~~~~~d~~~--~-~p-~~D~v~ 181 (283)
....+|||||||+|..+.++++..|..+++++|+ +.+++.+++ .+|++++.+|..+ + .+ .||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 3458999999999999999998877889999999 888766543 4689999999876 2 22 499999
Q ss_pred ecccccCCChhH--HHHHHHHHHHhhccCCCCcEEEEE
Q 023384 182 FKLVFHGLGDED--GLKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 182 ~~~vlh~~~d~~--~~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
+....+..+.+. ...++++++++|+| ||.+++.
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~p---gG~lv~~ 188 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKE---DGIFVAQ 188 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEE---EEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCC---CcEEEEE
Confidence 965543322211 24789999999999 5666553
No 191
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.12 E-value=6.9e-11 Score=98.23 Aligned_cols=94 Identities=19% Similarity=0.270 Sum_probs=72.0
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--------------CCCeEEEEcCCCC--C--CC-
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE--------------ADNLKYIAGDMFQ--F--IP- 175 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--------------~~rv~~~~~d~~~--~--~p- 175 (283)
.+...+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ ..+++++.+|+++ + ++
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCT
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccc
Confidence 34567999999999999999999999999999999 777654421 2579999999986 2 33
Q ss_pred -CceEEEecccccCCChhHH-----------HHHHHHHHHhhccCCCCcEEEEE
Q 023384 176 -PADAFLFKLVFHGLGDEDG-----------LKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 176 -~~D~v~~~~vlh~~~d~~~-----------~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
.+|.|++. ++++.. ..+++++.++|+| ||.+++.
T Consensus 127 ~~~d~v~~~-----~p~p~~k~~~~~~r~~~~~~l~~~~~~Lkp---gG~l~~~ 172 (246)
T 2vdv_E 127 GQLSKMFFC-----FPDPHFKQRKHKARIITNTLLSEYAYVLKE---GGVVYTI 172 (246)
T ss_dssp TCEEEEEEE-----SCCCC------CSSCCCHHHHHHHHHHEEE---EEEEEEE
T ss_pred cccCEEEEE-----CCCcccccchhHHhhccHHHHHHHHHHcCC---CCEEEEE
Confidence 37777643 233211 3789999999999 7887774
No 192
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.11 E-value=6.4e-11 Score=95.95 Aligned_cols=96 Identities=17% Similarity=0.218 Sum_probs=75.3
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC--CC-CCceEEEecc
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFP-GIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ--FI-PPADAFLFKL 184 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~--~~-p~~D~v~~~~ 184 (283)
.+..+|||||||+|..+..+++.+| +.+++++|+ +.+++.+++ .++++++.+|..+ +. ++||+|++..
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 134 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRDIDILFMDC 134 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCSEEEEEEET
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCCCCEEEEcC
Confidence 3457999999999999999999988 889999999 888777664 3579999999875 32 2299998863
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
. ......+++++++.|+| ||.+++.+..
T Consensus 135 ~-----~~~~~~~l~~~~~~Lkp---gG~lv~~~~~ 162 (210)
T 3c3p_A 135 D-----VFNGADVLERMNRCLAK---NALLIAVNAL 162 (210)
T ss_dssp T-----TSCHHHHHHHHGGGEEE---EEEEEEESSS
T ss_pred C-----hhhhHHHHHHHHHhcCC---CeEEEEECcc
Confidence 2 23346889999999999 6776664443
No 193
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.10 E-value=1.1e-10 Score=96.61 Aligned_cols=98 Identities=14% Similarity=0.183 Sum_probs=77.0
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC--C-C---------
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFP-GIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ--F-I--------- 174 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~--~-~--------- 174 (283)
..+..+|||||||+|..+..+++.+| ..+++++|+ +..++.+++ ..+++++.+|..+ + +
T Consensus 58 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 137 (239)
T 2hnk_A 58 ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSW 137 (239)
T ss_dssp HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGG
T ss_pred hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccc
Confidence 34568999999999999999999988 789999999 777776654 2469999999865 2 1
Q ss_pred --------CCceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 175 --------PPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 175 --------p~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
..||+|++... .+....+++++.+.|+| ||.+++.+...
T Consensus 138 ~~~f~~~~~~fD~I~~~~~-----~~~~~~~l~~~~~~L~p---gG~lv~~~~~~ 184 (239)
T 2hnk_A 138 ASDFAFGPSSIDLFFLDAD-----KENYPNYYPLILKLLKP---GGLLIADNVLW 184 (239)
T ss_dssp GTTTCCSTTCEEEEEECSC-----GGGHHHHHHHHHHHEEE---EEEEEEECSSG
T ss_pred cccccCCCCCcCEEEEeCC-----HHHHHHHHHHHHHHcCC---CeEEEEEcccc
Confidence 45999998643 34456889999999999 67777655443
No 194
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.09 E-value=6.4e-10 Score=97.40 Aligned_cols=100 Identities=15% Similarity=0.096 Sum_probs=78.7
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC-CCC--CceEEEecc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAF-PGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ-FIP--PADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~~p--~~D~v~~~~ 184 (283)
+.+..+|||+|||+|.++++++... |+.+++++|+ +.+++.+++ .++++++.+|+.+ +.+ .||+|++.-
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~np 280 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANP 280 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECC
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECC
Confidence 5667899999999999999999988 8999999999 888877764 2389999999998 433 489999965
Q ss_pred cccCCCh--hH----HHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 185 VFHGLGD--ED----GLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 185 vlh~~~d--~~----~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
..+.... .+ ...+++.+++.|+| ||+++++.
T Consensus 281 Pyg~r~~~~~~~~~~~~~~~~~~~~~Lkp---gG~l~i~t 317 (354)
T 3tma_A 281 PHGLRLGRKEGLFHLYWDFLRGALALLPP---GGRVALLT 317 (354)
T ss_dssp CSCC----CHHHHHHHHHHHHHHHHTSCT---TCEEEEEE
T ss_pred CCcCccCCcccHHHHHHHHHHHHHHhcCC---CcEEEEEe
Confidence 4432111 11 26789999999999 78888864
No 195
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.09 E-value=3.2e-10 Score=95.70 Aligned_cols=98 Identities=19% Similarity=0.167 Sum_probs=79.5
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCCC-CC-CceEEEecccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQF-IP-PADAFLFKLVF 186 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~~-~p-~~D~v~~~~vl 186 (283)
+....+|||+|||+|.++..+++..+..+++++|+ +.+++.+++ ..++.++.+|+.+. .+ .||+|++....
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYVH 196 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEECCCS
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEECCcc
Confidence 55678999999999999999999998889999999 888877664 35789999999873 32 49999986543
Q ss_pred cCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecC
Q 023384 187 HGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVIN 222 (283)
Q Consensus 187 h~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~ 222 (283)
....+++++.+.|+| ||.+++.+....
T Consensus 197 ------~~~~~l~~~~~~Lkp---gG~l~~s~~~~~ 223 (272)
T 3a27_A 197 ------KTHKFLDKTFEFLKD---RGVIHYHETVAE 223 (272)
T ss_dssp ------SGGGGHHHHHHHEEE---EEEEEEEEEEEG
T ss_pred ------cHHHHHHHHHHHcCC---CCEEEEEEcCcc
Confidence 234678999999999 788887765543
No 196
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.09 E-value=2.1e-10 Score=90.84 Aligned_cols=96 Identities=14% Similarity=0.044 Sum_probs=72.7
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCCC-------CCCceEEE
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQF-------IPPADAFL 181 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~~-------~p~~D~v~ 181 (283)
....+|||+|||+|.++..+++ .+..+++++|+ +.+++.+++ .++++++.+|+.+. ...||+|+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVS-RGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHH-cCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 3567999999999999999887 46679999999 888877764 25799999999872 23599999
Q ss_pred ecccccCCChhHHHHHHHHH--HHhhccCCCCcEEEEEee
Q 023384 182 FKLVFHGLGDEDGLKILKKR--RAAIASNGERGKVIIIDI 219 (283)
Q Consensus 182 ~~~vlh~~~d~~~~~iL~~~--~~~L~p~~~gg~lli~d~ 219 (283)
+...+|....+ .+++.+ .+.|+| ||.+++...
T Consensus 122 ~~~~~~~~~~~---~~~~~l~~~~~L~~---gG~l~~~~~ 155 (187)
T 2fhp_A 122 LDPPYAKQEIV---SQLEKMLERQLLTN---EAVIVCETD 155 (187)
T ss_dssp ECCCGGGCCHH---HHHHHHHHTTCEEE---EEEEEEEEE
T ss_pred ECCCCCchhHH---HHHHHHHHhcccCC---CCEEEEEeC
Confidence 98876633333 445555 788999 677666543
No 197
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.09 E-value=1.8e-10 Score=95.77 Aligned_cols=97 Identities=11% Similarity=0.072 Sum_probs=76.4
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC--C-C-------CC
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFP-GIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ--F-I-------PP 176 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~--~-~-------p~ 176 (283)
..+..+|||||||+|..+..+++.+| +.+++++|+ +..++.+++ .++++++.+|..+ + . ..
T Consensus 77 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 77 LINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS 156 (247)
T ss_dssp HTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred hhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence 34568999999999999999999988 789999999 777776654 3589999999875 2 2 35
Q ss_pred ceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 177 ADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 177 ~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
||+|++... ......+++++.+.|+| ||.+++-+..
T Consensus 157 fD~V~~d~~-----~~~~~~~l~~~~~~Lkp---GG~lv~d~~~ 192 (247)
T 1sui_A 157 YDFIFVDAD-----KDNYLNYHKRLIDLVKV---GGVIGYDNTL 192 (247)
T ss_dssp BSEEEECSC-----STTHHHHHHHHHHHBCT---TCCEEEECTT
T ss_pred EEEEEEcCc-----hHHHHHHHHHHHHhCCC---CeEEEEecCC
Confidence 999998643 23356889999999999 6776654433
No 198
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.08 E-value=1.1e-09 Score=92.75 Aligned_cols=97 Identities=14% Similarity=0.157 Sum_probs=72.6
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCC----------------CCCCeEEEEcCCCCC---CCC
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLP----------------EADNLKYIAGDMFQF---IPP 176 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~----------------~~~rv~~~~~d~~~~---~p~ 176 (283)
....+|||||||+|..+..+++. |..+++++|+ +.+++.++ ..+|++++.+|..+. ...
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 45589999999999999999998 8889999999 77776543 236899999998652 235
Q ss_pred ceEEEecccccCCChhH--HHHHHHHHHHhhccCCCCcEEEEE
Q 023384 177 ADAFLFKLVFHGLGDED--GLKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 177 ~D~v~~~~vlh~~~d~~--~~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
||+|++....+..+.+. ...++++++++|+| ||.+++.
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~p---gG~lv~~ 192 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNN---PGIYVTQ 192 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEE---EEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCC---CcEEEEE
Confidence 99999866543222222 25789999999999 6666554
No 199
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.07 E-value=5.1e-11 Score=93.74 Aligned_cols=96 Identities=9% Similarity=0.078 Sum_probs=73.2
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCCC---C-CCceEEEecc
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQF---I-PPADAFLFKL 184 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~~---~-p~~D~v~~~~ 184 (283)
....+|||+|||+|.++..+++. +..+++++|+ +.+++.+++ .++++++.+|+.+. . ..||+|++..
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 35679999999999999999887 6679999999 778777654 25799999998772 2 2499999987
Q ss_pred cccCCChhHHHHHHHHHH--HhhccCCCCcEEEEEee
Q 023384 185 VFHGLGDEDGLKILKKRR--AAIASNGERGKVIIIDI 219 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~--~~L~p~~~gg~lli~d~ 219 (283)
.+|. .....+++.+. +.|+| ||.+++...
T Consensus 109 ~~~~---~~~~~~~~~l~~~~~L~~---gG~l~~~~~ 139 (177)
T 2esr_A 109 PYAK---ETIVATIEALAAKNLLSE---QVMVVCETD 139 (177)
T ss_dssp SSHH---HHHHHHHHHHHHTTCEEE---EEEEEEEEE
T ss_pred CCCc---chHHHHHHHHHhCCCcCC---CcEEEEEEC
Confidence 6642 23345666666 89999 677666543
No 200
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.07 E-value=3.9e-10 Score=93.16 Aligned_cols=95 Identities=14% Similarity=0.104 Sum_probs=75.0
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC--C-C-------CC
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFP-GIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ--F-I-------PP 176 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~--~-~-------p~ 176 (283)
..+..+|||||||+|..+..+++..| +.+++++|+ ++.++.+++ .++++++.+|..+ + . ..
T Consensus 68 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 68 LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGS 147 (237)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence 44568999999999999999999988 789999999 777776653 3579999999876 2 2 35
Q ss_pred ceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 177 ADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 177 ~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
||+|++.. .......+++++.+.|+| ||.+++-+
T Consensus 148 fD~I~~d~-----~~~~~~~~l~~~~~~L~p---GG~lv~d~ 181 (237)
T 3c3y_A 148 YDFGFVDA-----DKPNYIKYHERLMKLVKV---GGIVAYDN 181 (237)
T ss_dssp EEEEEECS-----CGGGHHHHHHHHHHHEEE---EEEEEEEC
T ss_pred cCEEEECC-----chHHHHHHHHHHHHhcCC---CeEEEEec
Confidence 99999753 334467889999999999 56554433
No 201
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.07 E-value=1.3e-10 Score=93.63 Aligned_cols=95 Identities=17% Similarity=0.178 Sum_probs=72.8
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------C--CCeEEEEcCCCC-C-C---CC-ceEEEe
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------A--DNLKYIAGDMFQ-F-I---PP-ADAFLF 182 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~--~rv~~~~~d~~~-~-~---p~-~D~v~~ 182 (283)
...+|||+|||+|.++..++++.. .+++++|+ +.+++.+++ . ++++++.+|+.+ . . .. ||+|++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQA-KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 347999999999999998777643 58999999 888877764 2 689999999876 2 1 36 999999
Q ss_pred cccccCCChhHHHHHHHHH--HHhhccCCCCcEEEEEee
Q 023384 183 KLVFHGLGDEDGLKILKKR--RAAIASNGERGKVIIIDI 219 (283)
Q Consensus 183 ~~vlh~~~d~~~~~iL~~~--~~~L~p~~~gg~lli~d~ 219 (283)
...+| .. ....+++.+ .+.|+| ||.+++...
T Consensus 132 ~~~~~-~~--~~~~~l~~~~~~~~Lkp---gG~l~i~~~ 164 (201)
T 2ift_A 132 DPPFH-FN--LAEQAISLLCENNWLKP---NALIYVETE 164 (201)
T ss_dssp CCCSS-SC--HHHHHHHHHHHTTCEEE---EEEEEEEEE
T ss_pred CCCCC-Cc--cHHHHHHHHHhcCccCC---CcEEEEEEC
Confidence 88865 33 345778888 557999 677766554
No 202
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.07 E-value=1.1e-09 Score=89.53 Aligned_cols=93 Identities=24% Similarity=0.207 Sum_probs=75.8
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHC-----CCCeEEEeec-hHHHhcCCC-----------CCCeEEEEcCCCCCC----
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAF-----PGIKCTVLDL-PHVVANLPE-----------ADNLKYIAGDMFQFI---- 174 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~-----p~~~~~~~D~-~~~~~~a~~-----------~~rv~~~~~d~~~~~---- 174 (283)
.....+|||||||+|.++..+++.. |..+++++|+ +..++.+++ ..+++++.+|..+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 4566899999999999999999986 6789999999 777776654 258999999998743
Q ss_pred ---CCceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 175 ---PPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 175 ---p~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
..||+|++...+|++ ++++.+.|+| ||++++.-.
T Consensus 158 ~~~~~fD~I~~~~~~~~~--------~~~~~~~Lkp---gG~lv~~~~ 194 (227)
T 2pbf_A 158 KELGLFDAIHVGASASEL--------PEILVDLLAE---NGKLIIPIE 194 (227)
T ss_dssp HHHCCEEEEEECSBBSSC--------CHHHHHHEEE---EEEEEEEEE
T ss_pred ccCCCcCEEEECCchHHH--------HHHHHHhcCC---CcEEEEEEc
Confidence 249999999998864 4678899999 788777653
No 203
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.06 E-value=4.1e-10 Score=89.91 Aligned_cols=97 Identities=18% Similarity=0.239 Sum_probs=72.6
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCC---------CeEEEeechHHHhcCCCCCCeEEE-EcCCCC-C--------CC-
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPG---------IKCTVLDLPHVVANLPEADNLKYI-AGDMFQ-F--------IP- 175 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~---------~~~~~~D~~~~~~~a~~~~rv~~~-~~d~~~-~--------~p- 175 (283)
+....+|||||||+|.++..+++.++. .+++++|+.+.. ...+++++ .+|+.+ + ++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----PLEGATFLCPADVTDPRTSQRILEVLPG 95 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----CCTTCEEECSCCTTSHHHHHHHHHHSGG
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc----cCCCCeEEEeccCCCHHHHHHHHHhcCC
Confidence 456689999999999999999999875 899999995421 13578899 999876 3 22
Q ss_pred -CceEEEecccccC----CChhH-----HHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 176 -PADAFLFKLVFHG----LGDED-----GLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 176 -~~D~v~~~~vlh~----~~d~~-----~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
.||+|++...+|. ..+.. ...+++++.++|+| ||++++...
T Consensus 96 ~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~lv~~~~ 146 (196)
T 2nyu_A 96 RRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQP---GGTFLCKTW 146 (196)
T ss_dssp GCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEEC
T ss_pred CCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcC---CCEEEEEec
Confidence 4999998654442 12221 14789999999999 788877653
No 204
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.06 E-value=8.6e-10 Score=95.17 Aligned_cols=98 Identities=14% Similarity=0.150 Sum_probs=74.2
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEEcCCCCC---CC-CceEEE
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----------ADNLKYIAGDMFQF---IP-PADAFL 181 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~rv~~~~~d~~~~---~p-~~D~v~ 181 (283)
....+|||||||+|..+..+++..|..+++++|+ +.+++.+++ .+|++++.+|..+. .+ .||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 4558999999999999999998878899999999 888766543 36899999998762 23 499999
Q ss_pred ecccccCCChhHH--HHHHHHHHHhhccCCCCcEEEEE
Q 023384 182 FKLVFHGLGDEDG--LKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 182 ~~~vlh~~~d~~~--~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
+...-+.-+.+.. ..++++++++|+| ||.+++.
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~ 229 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKP---NGYCVAQ 229 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEE---EEEEEEE
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCC---CcEEEEE
Confidence 8643221112221 5889999999999 5666553
No 205
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.05 E-value=4.9e-10 Score=94.69 Aligned_cols=101 Identities=15% Similarity=0.234 Sum_probs=79.3
Q ss_pred HHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHH-CCCCeEEEeec-hHHHhcCCC---------CCCeEEEEcCCCC-C
Q 023384 106 FVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEA-FPGIKCTVLDL-PHVVANLPE---------ADNLKYIAGDMFQ-F 173 (283)
Q Consensus 106 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~---------~~rv~~~~~d~~~-~ 173 (283)
.++. .++ .....+|||+|||+|.++..+++. .|..+++++|+ +..++.+++ .++++++.+|+.+ +
T Consensus 90 ~i~~-~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~ 166 (280)
T 1i9g_A 90 QIVH-EGD--IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE 166 (280)
T ss_dssp HHHH-HTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC
T ss_pred HHHH-HcC--CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC
Confidence 4444 444 667789999999999999999996 57899999999 777766543 2589999999987 5
Q ss_pred CC--CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 174 IP--PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 174 ~p--~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
++ .||+|++ +.++.. .+|+++.++|+| ||.+++...
T Consensus 167 ~~~~~~D~v~~-----~~~~~~--~~l~~~~~~L~p---gG~l~~~~~ 204 (280)
T 1i9g_A 167 LPDGSVDRAVL-----DMLAPW--EVLDAVSRLLVA---GGVLMVYVA 204 (280)
T ss_dssp CCTTCEEEEEE-----ESSCGG--GGHHHHHHHEEE---EEEEEEEES
T ss_pred CCCCceeEEEE-----CCcCHH--HHHHHHHHhCCC---CCEEEEEeC
Confidence 53 4999998 233333 679999999999 788888764
No 206
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.05 E-value=5.7e-10 Score=93.61 Aligned_cols=96 Identities=16% Similarity=0.109 Sum_probs=70.0
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC--CC------CeEEE--EcCCCC-CCCCceEEEecc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPE--AD------NLKYI--AGDMFQ-FIPPADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~--~~------rv~~~--~~d~~~-~~p~~D~v~~~~ 184 (283)
+....+|||||||+|.++..+++. .+++++|+.+++..+++ .. ++.++ .+|+.+ +...||+|++..
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~V~sd~ 148 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLPVERTDVIMCDV 148 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCCCCCCcEEEEeC
Confidence 456689999999999999998887 68999999445433322 11 68899 999987 533599999976
Q ss_pred cccCCChh----H-HHHHHHHHHHhhccCCCCc--EEEEEe
Q 023384 185 VFHGLGDE----D-GLKILKKRRAAIASNGERG--KVIIID 218 (283)
Q Consensus 185 vlh~~~d~----~-~~~iL~~~~~~L~p~~~gg--~lli~d 218 (283)
. +...+. . ...+|+.+.++|+| || .+++-.
T Consensus 149 ~-~~~~~~~~d~~~~l~~L~~~~r~Lkp---GG~~~fv~kv 185 (265)
T 2oxt_A 149 G-ESSPKWSVESERTIKILELLEKWKVK---NPSADFVVKV 185 (265)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHH---CTTCEEEEEE
T ss_pred c-ccCCccchhHHHHHHHHHHHHHHhcc---CCCeEEEEEe
Confidence 6 433221 1 23489999999999 78 766644
No 207
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.05 E-value=1.7e-09 Score=86.38 Aligned_cols=94 Identities=15% Similarity=0.316 Sum_probs=69.6
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEEEcCCCCCC--------------CCceEEE
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPEADNLKYIAGDMFQFI--------------PPADAFL 181 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~rv~~~~~d~~~~~--------------p~~D~v~ 181 (283)
+....+|||+|||+|.++..+++. ..+++++|+.+. ....+++++.+|+.+.. ..||+|+
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~----~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vl 96 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEM----EEIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVV 96 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCC----CCCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEecccc----ccCCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEe
Confidence 456789999999999999999988 789999999432 12468999999998831 3699999
Q ss_pred ecccccC---CC-h-----hHHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 182 FKLVFHG---LG-D-----EDGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 182 ~~~vlh~---~~-d-----~~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
+...... +. | +.+..+|+.+.+.|+| ||.+++..
T Consensus 97 sd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~Lkp---GG~lv~k~ 139 (191)
T 3dou_A 97 SDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRN---GGNVLLKQ 139 (191)
T ss_dssp ECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred cCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccC---CCEEEEEE
Confidence 8542211 11 1 2245789999999999 67776543
No 208
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.05 E-value=2.3e-10 Score=97.06 Aligned_cols=98 Identities=14% Similarity=0.150 Sum_probs=76.2
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEEcCCCCC---CC-CceEEE
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----------ADNLKYIAGDMFQF---IP-PADAFL 181 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~rv~~~~~d~~~~---~p-~~D~v~ 181 (283)
+...+|||||||+|..+..+++..|..+++++|+ +.+++.+++ ..|++++.+|..+. .+ .||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 4558999999999999999998888899999999 888776543 36899999998762 23 499999
Q ss_pred ecccccCCChhHH--HHHHHHHHHhhccCCCCcEEEEE
Q 023384 182 FKLVFHGLGDEDG--LKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 182 ~~~vlh~~~d~~~--~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
+....+..+.+.. ..++++++++|+| ||.+++.
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~p---gG~lv~~ 191 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKP---NGYCVAQ 191 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEE---EEEEEEE
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCC---CcEEEEE
Confidence 8654443233322 5889999999999 6776654
No 209
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.04 E-value=2.1e-09 Score=89.03 Aligned_cols=92 Identities=15% Similarity=0.212 Sum_probs=75.2
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCCCC-C--CceEEEecc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQFI-P--PADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~~~-p--~~D~v~~~~ 184 (283)
.....+|||+|||+|.++..+++. ..+++++|+ ++.++.+++ ..++++..+|+.+.. + .||+|++.
T Consensus 89 ~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~- 165 (248)
T 2yvl_A 89 LNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVD- 165 (248)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEEC-
T ss_pred CCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEEC-
Confidence 566789999999999999999998 779999999 777776654 268999999999854 4 49999972
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
.++. ..+++++.++|+| ||++++...
T Consensus 166 ----~~~~--~~~l~~~~~~L~~---gG~l~~~~~ 191 (248)
T 2yvl_A 166 ----VREP--WHYLEKVHKSLME---GAPVGFLLP 191 (248)
T ss_dssp ----SSCG--GGGHHHHHHHBCT---TCEEEEEES
T ss_pred ----CcCH--HHHHHHHHHHcCC---CCEEEEEeC
Confidence 3333 3679999999999 799888774
No 210
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.03 E-value=4.8e-10 Score=91.86 Aligned_cols=92 Identities=18% Similarity=0.238 Sum_probs=74.6
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCC------CCeEEEeec-hHHHhcCCC-----------CCCeEEEEcCCCCCCC--
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFP------GIKCTVLDL-PHVVANLPE-----------ADNLKYIAGDMFQFIP-- 175 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p------~~~~~~~D~-~~~~~~a~~-----------~~rv~~~~~d~~~~~p-- 175 (283)
.....+|||||||+|.++..+++..+ ..+++++|+ ++.++.+++ ..+++++.+|..++++
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 161 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPN 161 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcC
Confidence 45668999999999999999998765 379999999 777776654 2589999999987543
Q ss_pred -CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 176 -PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 176 -~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
.||+|++...+|++. +++.+.|+| ||++++.-
T Consensus 162 ~~fD~I~~~~~~~~~~--------~~~~~~Lkp---gG~lvi~~ 194 (227)
T 1r18_A 162 APYNAIHVGAAAPDTP--------TELINQLAS---GGRLIVPV 194 (227)
T ss_dssp CSEEEEEECSCBSSCC--------HHHHHTEEE---EEEEEEEE
T ss_pred CCccEEEECCchHHHH--------HHHHHHhcC---CCEEEEEE
Confidence 499999999998765 568889999 68777653
No 211
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.03 E-value=5.6e-10 Score=94.22 Aligned_cols=96 Identities=19% Similarity=0.094 Sum_probs=69.9
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC--CC------CeEEE--EcCCCC-CCCCceEEEecc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPE--AD------NLKYI--AGDMFQ-FIPPADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~--~~------rv~~~--~~d~~~-~~p~~D~v~~~~ 184 (283)
+....+|||||||+|.++..+++. .+++++|+.+++..+++ .. ++.++ .+|+.+ +...||+|++..
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~Vvsd~ 156 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKMEPFQADTVLCDI 156 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCCCCCCSEEEECC
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCCCCCcCEEEECC
Confidence 456689999999999999999887 58999999445433322 11 68999 999987 533599999976
Q ss_pred cccCCCh----hH-HHHHHHHHHHhhccCCCCc--EEEEEe
Q 023384 185 VFHGLGD----ED-GLKILKKRRAAIASNGERG--KVIIID 218 (283)
Q Consensus 185 vlh~~~d----~~-~~~iL~~~~~~L~p~~~gg--~lli~d 218 (283)
. +.... .. ...+|+.+.++|+| || .+++-.
T Consensus 157 ~-~~~~~~~~d~~~~l~~L~~~~r~Lkp---GG~~~~v~~~ 193 (276)
T 2wa2_A 157 G-ESNPTAAVEASRTLTVLNVISRWLEY---NQGCGFCVKV 193 (276)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHH---STTCEEEEEE
T ss_pred C-cCCCchhhhHHHHHHHHHHHHHHhcc---CCCcEEEEEe
Confidence 6 43322 11 23479999999999 78 766633
No 212
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.03 E-value=1.5e-09 Score=92.58 Aligned_cols=98 Identities=11% Similarity=0.083 Sum_probs=71.8
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEEcCCCC--C-CC-CceEEE
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----------ADNLKYIAGDMFQ--F-IP-PADAFL 181 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~rv~~~~~d~~~--~-~p-~~D~v~ 181 (283)
....+|||||||+|..+..+++..|..+++++|+ +.+++.+++ .++++++.+|..+ + .+ .||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 3458999999999999999999888899999999 777766543 3689999999765 2 22 499999
Q ss_pred ecccccCCChh---HHHHHHHHHHHhhccCCCCcEEEEE
Q 023384 182 FKLVFHGLGDE---DGLKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 182 ~~~vlh~~~d~---~~~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
+...-+..... ....++++++++|+| ||.+++.
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~ 204 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKE---DGVFSAE 204 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEE---EEEEEEE
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCC---CcEEEEE
Confidence 84332201111 125889999999999 6766653
No 213
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.03 E-value=2.3e-10 Score=94.23 Aligned_cols=97 Identities=13% Similarity=0.197 Sum_probs=75.8
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC--C-C------CCce
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFP-GIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ--F-I------PPAD 178 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~--~-~------p~~D 178 (283)
.+..+|||||||+|..+..+++.+| +.+++++|+ ++.++.+++ .++++++.+|..+ + + ..||
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 3457999999999999999999987 789999999 777776654 3579999999754 1 1 4599
Q ss_pred EEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 179 AFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 179 ~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
+|++... ......+++++.+.|+| ||.+++.+...
T Consensus 151 ~V~~d~~-----~~~~~~~l~~~~~~Lkp---gG~lv~~~~~~ 185 (232)
T 3cbg_A 151 LIFIDAD-----KRNYPRYYEIGLNLLRR---GGLMVIDNVLW 185 (232)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHTEEE---EEEEEEECTTG
T ss_pred EEEECCC-----HHHHHHHHHHHHHHcCC---CeEEEEeCCCc
Confidence 9997643 34456889999999999 67766655433
No 214
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.02 E-value=2.1e-10 Score=106.57 Aligned_cols=104 Identities=15% Similarity=0.232 Sum_probs=83.4
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC---CCC--CceEEEec
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ---FIP--PADAFLFK 183 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~---~~p--~~D~v~~~ 183 (283)
+....+|||||||.|.++..|++. +.+++++|. +..++.|+. .-+++|..+|..+ ..+ .||+|++.
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~ 141 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGL 141 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEE
T ss_pred cCCCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEEC
Confidence 445689999999999999999997 789999999 777776653 2468999999876 232 49999999
Q ss_pred ccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCC
Q 023384 184 LVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAE 224 (283)
Q Consensus 184 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~ 224 (283)
.+|||.+|++...-+.++.+.|++ +++.++...+..+.
T Consensus 142 e~~ehv~~~~~~~~~~~~~~tl~~---~~~~~~~~~~~~e~ 179 (569)
T 4azs_A 142 SVFHHIVHLHGIDEVKRLLSRLAD---VTQAVILELAVKEE 179 (569)
T ss_dssp SCHHHHHHHHCHHHHHHHHHHHHH---HSSEEEEECCCTTS
T ss_pred cchhcCCCHHHHHHHHHHHHHhcc---ccceeeEEeccccc
Confidence 999999988766667778888988 67777777655443
No 215
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.02 E-value=4.1e-10 Score=97.63 Aligned_cols=98 Identities=14% Similarity=0.143 Sum_probs=75.2
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEEcCCCC---CCC--CceEE
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----------ADNLKYIAGDMFQ---FIP--PADAF 180 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~rv~~~~~d~~~---~~p--~~D~v 180 (283)
....+|||||||+|..++.+++..|..+++++|+ +.+++.+++ ..|++++.+|..+ ..+ .||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 4568999999999999999999888899999999 888776653 3689999999865 222 49999
Q ss_pred EecccccCCChhH--HHHHHHHHHHhhccCCCCcEEEEE
Q 023384 181 LFKLVFHGLGDED--GLKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 181 ~~~~vlh~~~d~~--~~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
++....+....+. ...++++++++|+| ||.+++.
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~ 234 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRP---GGVVCTQ 234 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEE---EEEEEEE
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCC---CcEEEEe
Confidence 9855422111111 36889999999999 6766654
No 216
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.01 E-value=7.2e-10 Score=94.93 Aligned_cols=100 Identities=16% Similarity=0.204 Sum_probs=71.1
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-----hHHHhcCCC----CCCeEEEEc-CCCC-CCCCceEEEecc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-----PHVVANLPE----ADNLKYIAG-DMFQ-FIPPADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-----~~~~~~a~~----~~rv~~~~~-d~~~-~~p~~D~v~~~~ 184 (283)
+.+..+|||||||+|.++..++++ .+++++|+ +..++.... .+++.++.+ |+.+ +...||+|++..
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~~~~fD~V~sd~ 156 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIPPERCDTLLCDI 156 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSCCCCCSEEEECC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCCcCCCCEEEECC
Confidence 455689999999999999999887 47899998 433332221 257999999 9987 544699999976
Q ss_pred ccc---CCChhH-HHHHHHHHHHhhccCCCCcEEEEEeeecC
Q 023384 185 VFH---GLGDED-GLKILKKRRAAIASNGERGKVIIIDIVIN 222 (283)
Q Consensus 185 vlh---~~~d~~-~~~iL~~~~~~L~p~~~gg~lli~d~~~~ 222 (283)
.++ ...+.. ...+|+.++++|+| ||.+++ ....+
T Consensus 157 ~~~~g~~~~d~~~~l~~L~~~~~~Lkp---GG~~v~-kv~~~ 194 (305)
T 2p41_A 157 GESSPNPTVEAGRTLRVLNLVENWLSN---NTQFCV-KVLNP 194 (305)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHCCT---TCEEEE-EESCC
T ss_pred ccccCcchhhHHHHHHHHHHHHHHhCC---CCEEEE-EeCCC
Confidence 553 222222 23689999999999 686655 44433
No 217
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.01 E-value=3.3e-10 Score=97.60 Aligned_cols=99 Identities=14% Similarity=0.131 Sum_probs=77.0
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----------CCCeEEEEcCCCCC---CC-CceEE
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----------ADNLKYIAGDMFQF---IP-PADAF 180 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------~~rv~~~~~d~~~~---~p-~~D~v 180 (283)
+...+|||||||+|..+..+++..|..+++++|+ +.+++.+++ ..|++++.+|..+. .+ .||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 4558999999999999999999888889999999 777765543 36899999998762 22 49999
Q ss_pred EecccccC---CChhH--HHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 181 LFKLVFHG---LGDED--GLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 181 ~~~~vlh~---~~d~~--~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
++....|. -+.+. ...++++++++|+| ||.+++..
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~~ 195 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNP---GGVMGMQT 195 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEE---EEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCC---CcEEEEEc
Confidence 99776654 11111 35889999999999 67777653
No 218
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.00 E-value=3.3e-10 Score=97.05 Aligned_cols=99 Identities=14% Similarity=0.115 Sum_probs=73.1
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEEcCCCC--CC-C-CceEEE
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----------ADNLKYIAGDMFQ--FI-P-PADAFL 181 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~rv~~~~~d~~~--~~-p-~~D~v~ 181 (283)
....+|||||||+|..+..+++..|..+++++|+ +.+++.+++ .+|++++.+|..+ +. + .||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 4568999999999999999999888899999999 888766553 4689999999865 22 2 499999
Q ss_pred ecccccCCChh--HHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 182 FKLVFHGLGDE--DGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 182 ~~~vlh~~~d~--~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
+....+..+.. ....++++++++|+| ||.+++..
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~~ 209 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKE---DGVLCCQG 209 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEE---EEEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCC---CeEEEEec
Confidence 86544322211 124789999999999 56665543
No 219
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.00 E-value=3.1e-09 Score=95.94 Aligned_cols=104 Identities=15% Similarity=0.129 Sum_probs=80.5
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCC-CeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC-C--CC--CceEEEe
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPG-IKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ-F--IP--PADAFLF 182 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~--~p--~~D~v~~ 182 (283)
.....+|||+|||+|..+..+++..++ .+++++|+ +..++.+++ ..++.++.+|+.+ + ++ .||+|++
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 566789999999999999999999887 89999999 766665543 3479999999987 3 44 3999996
Q ss_pred ------cccccCCChh-------HH-------HHHHHHHHHhhccCCCCcEEEEEeeecC
Q 023384 183 ------KLVFHGLGDE-------DG-------LKILKKRRAAIASNGERGKVIIIDIVIN 222 (283)
Q Consensus 183 ------~~vlh~~~d~-------~~-------~~iL~~~~~~L~p~~~gg~lli~d~~~~ 222 (283)
..+++..++. +. .++|+++.+.||| ||++++.+....
T Consensus 337 D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lkp---GG~lvy~tcs~~ 393 (450)
T 2yxl_A 337 DAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKP---GGRLLYTTCSIF 393 (450)
T ss_dssp ECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEE---EEEEEEEESCCC
T ss_pred cCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCC---CcEEEEEeCCCC
Confidence 3455544432 11 5789999999999 788888776543
No 220
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.00 E-value=1.7e-09 Score=94.83 Aligned_cols=93 Identities=20% Similarity=0.271 Sum_probs=69.4
Q ss_pred CCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEEcCCCC-CCCC-ceEEEecccccCC
Q 023384 119 LGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPE-------ADNLKYIAGDMFQ-FIPP-ADAFLFKLVFHGL 189 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~rv~~~~~d~~~-~~p~-~D~v~~~~vlh~~ 189 (283)
.++|||||||+|.+++..+++ -..+++++|..++++.|++ .++|+++.+|+.+ ++|. +|+|++-..-+.+
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~a-GA~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~~l 162 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQA-GARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYGL 162 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBTTB
T ss_pred CCEEEEeCCCccHHHHHHHHh-CCCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeecccccc
Confidence 479999999999999866665 3358999998656655543 6889999999998 7774 9999874433332
Q ss_pred Ch-hHHHHHHHHHHHhhccCCCCcEEE
Q 023384 190 GD-EDGLKILKKRRAAIASNGERGKVI 215 (283)
Q Consensus 190 ~d-~~~~~iL~~~~~~L~p~~~gg~ll 215 (283)
-. .....++....+.|+| ||.++
T Consensus 163 ~~e~~l~~~l~a~~r~Lkp---~G~~i 186 (376)
T 4hc4_A 163 LHESMLSSVLHARTKWLKE---GGLLL 186 (376)
T ss_dssp TTTCSHHHHHHHHHHHEEE---EEEEE
T ss_pred cccchhhhHHHHHHhhCCC---CceEC
Confidence 22 2456788888899999 57654
No 221
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.00 E-value=1.5e-09 Score=88.65 Aligned_cols=92 Identities=17% Similarity=0.183 Sum_probs=74.1
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC-----------CCCeEEEEcCCCCC-C--CCceE
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAF-PGIKCTVLDL-PHVVANLPE-----------ADNLKYIAGDMFQF-I--PPADA 179 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-----------~~rv~~~~~d~~~~-~--p~~D~ 179 (283)
.....+|||||||+|..+..+++.. |..+++++|+ +..++.+++ .++++++.+|.... . ..||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 4566899999999999999999885 6789999999 777776653 24899999998763 2 24999
Q ss_pred EEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 180 FLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 180 v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
|++...++++ ++++.+.|+| ||++++..
T Consensus 155 i~~~~~~~~~--------~~~~~~~Lkp---gG~lv~~~ 182 (226)
T 1i1n_A 155 IHVGAAAPVV--------PQALIDQLKP---GGRLILPV 182 (226)
T ss_dssp EEECSBBSSC--------CHHHHHTEEE---EEEEEEEE
T ss_pred EEECCchHHH--------HHHHHHhcCC---CcEEEEEE
Confidence 9999988755 3578899999 78877754
No 222
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.00 E-value=2.5e-10 Score=98.15 Aligned_cols=98 Identities=18% Similarity=0.176 Sum_probs=71.3
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEEcCCCCC----CCCceEEE
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----------ADNLKYIAGDMFQF----IPPADAFL 181 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~rv~~~~~d~~~~----~p~~D~v~ 181 (283)
....+|||||||+|..+..+++..|..+++++|+ +.+++.+++ .+|++++.+|..+. ...||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 4558999999999999999999888899999999 888766543 36899999998762 22499999
Q ss_pred ecccccCCChhHH--HHHHHHHHHhhccCCCCcEEEEE
Q 023384 182 FKLVFHGLGDEDG--LKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 182 ~~~vlh~~~d~~~--~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
+...-|.-+++.. ..++++++++|+| ||.+++.
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~Lkp---gG~lv~~ 221 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKE---DGILSSQ 221 (314)
T ss_dssp ECCC-------------HHHHHHHHEEE---EEEEEEE
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCC---CeEEEEE
Confidence 8554332222221 6889999999999 5666554
No 223
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.00 E-value=6.8e-10 Score=89.41 Aligned_cols=95 Identities=14% Similarity=0.164 Sum_probs=71.7
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC--CCC--CceEEEecccc
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ--FIP--PADAFLFKLVF 186 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~--~~p--~~D~v~~~~vl 186 (283)
...+|||+|||+|.++..++++.. .+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|++...+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 347999999999999998887743 48999999 888877764 2589999999876 332 49999998776
Q ss_pred cCCChhHHHHHHHHHHHh--hccCCCCcEEEEEee
Q 023384 187 HGLGDEDGLKILKKRRAA--IASNGERGKVIIIDI 219 (283)
Q Consensus 187 h~~~d~~~~~iL~~~~~~--L~p~~~gg~lli~d~ 219 (283)
| ..+ ...+++.+.+. |+| ||.+++...
T Consensus 133 ~-~~~--~~~~l~~l~~~~~L~p---gG~l~i~~~ 161 (202)
T 2fpo_A 133 R-RGL--LEETINLLEDNGWLAD---EALIYVESE 161 (202)
T ss_dssp S-TTT--HHHHHHHHHHTTCEEE---EEEEEEEEE
T ss_pred C-CCc--HHHHHHHHHhcCccCC---CcEEEEEEC
Confidence 5 332 34667777664 999 677665543
No 224
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.99 E-value=1.1e-09 Score=87.80 Aligned_cols=89 Identities=17% Similarity=0.246 Sum_probs=66.1
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEcCCCCCCCCceEEEecccccCCChhH
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAGDMFQFIPPADAFLFKLVFHGLGDED 193 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~ 193 (283)
.....+|||+|||+|.++..+++. +..+++++|+ +.+++.+++ ..+++++.+|+.+-...||+|++...+|++.+..
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~D~v~~~~p~~~~~~~~ 127 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEISGKYDTWIMNPPFGSVVKHS 127 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCCCCEEEEEECCCC-------
T ss_pred CCCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCCCCeeEEEECCCchhccCch
Confidence 345679999999999999999887 5568999999 888877765 3389999999987214699999999999987754
Q ss_pred HHHHHHHHHHhh
Q 023384 194 GLKILKKRRAAI 205 (283)
Q Consensus 194 ~~~iL~~~~~~L 205 (283)
..++++++.+.+
T Consensus 128 ~~~~l~~~~~~~ 139 (200)
T 1ne2_A 128 DRAFIDKAFETS 139 (200)
T ss_dssp CHHHHHHHHHHE
T ss_pred hHHHHHHHHHhc
Confidence 456777777665
No 225
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.98 E-value=2.7e-11 Score=100.26 Aligned_cols=135 Identities=16% Similarity=0.114 Sum_probs=95.1
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----C--CCeEEEEcCCCC-CCC-CceEEEecccc
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----A--DNLKYIAGDMFQ-FIP-PADAFLFKLVF 186 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~--~rv~~~~~d~~~-~~p-~~D~v~~~~vl 186 (283)
....+|||+|||+|.++..+++.. .+++++|+ +.+++.+++ . .+++++.+|+.+ +.+ .||+|++...+
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPW 154 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCC
T ss_pred cCCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCc
Confidence 356899999999999999999874 89999999 888877664 1 589999999988 422 59999999999
Q ss_pred cCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCe
Q 023384 187 HGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSH 266 (283)
Q Consensus 187 h~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 266 (283)
|+..+.. ..+.+++++|+| ||.+ +++...... .+.... -.+....+++.+++...|.-.
T Consensus 155 ~~~~~~~--~~~~~~~~~L~p---gG~~-i~~~~~~~~------------~~~~~~---lp~~~~~~~~~~~l~~~g~~~ 213 (241)
T 3gdh_A 155 GGPDYAT--AETFDIRTMMSP---DGFE-IFRLSKKIT------------NNIVYF---LPRNADIDQVASLAGPGGQVE 213 (241)
T ss_dssp SSGGGGG--SSSBCTTTSCSS---CHHH-HHHHHHHHC------------SCEEEE---EETTBCHHHHHHTTCTTCCEE
T ss_pred CCcchhh--hHHHHHHhhcCC---ccee-HHHHHHhhC------------CceEEE---CCCCCCHHHHHHHhccCCCEE
Confidence 9877654 357789999999 6763 333211100 000000 122346778888888887665
Q ss_pred eeEEEcCC
Q 023384 267 YKITPIFG 274 (283)
Q Consensus 267 ~~~~~~~~ 274 (283)
++.....+
T Consensus 214 i~~~~~~~ 221 (241)
T 3gdh_A 214 IEQNFLNN 221 (241)
T ss_dssp EEEEEETT
T ss_pred EEehhhcC
Confidence 55544444
No 226
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.97 E-value=1.4e-09 Score=91.09 Aligned_cols=89 Identities=10% Similarity=0.063 Sum_probs=72.7
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEEcCCCCCCCCceEEEeccc
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----------ADNLKYIAGDMFQFIPPADAFLFKLV 185 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~rv~~~~~d~~~~~p~~D~v~~~~v 185 (283)
+...+|||||||+|..+..+++. + .+++++|+ +.+++.+++ .+|++++.+|..+-...||+|++.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~Ii~d-- 146 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFCL-- 146 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEES--
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEEEEC--
Confidence 35579999999999999999988 7 89999999 888888775 258999999988733569999985
Q ss_pred ccCCChhHHHHHHHHHHHhhccCCCCcEEEEE
Q 023384 186 FHGLGDEDGLKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 186 lh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
.+++. .++++++++|+| ||.+++.
T Consensus 147 ---~~dp~--~~~~~~~~~L~p---gG~lv~~ 170 (262)
T 2cmg_A 147 ---QEPDI--HRIDGLKRMLKE---DGVFISV 170 (262)
T ss_dssp ---SCCCH--HHHHHHHTTEEE---EEEEEEE
T ss_pred ---CCChH--HHHHHHHHhcCC---CcEEEEE
Confidence 34443 489999999999 6776664
No 227
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.97 E-value=6.2e-10 Score=94.53 Aligned_cols=102 Identities=22% Similarity=0.364 Sum_probs=75.0
Q ss_pred HHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC-CC
Q 023384 104 TSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ-FI 174 (283)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~-~~ 174 (283)
...+++ .++ .....+|||||||+|.++..+++.. .+++++|+ +.+++.+++ .++++++.+|+.+ ++
T Consensus 17 ~~~i~~-~~~--~~~~~~VLDiG~G~G~lt~~L~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~ 91 (285)
T 1zq9_A 17 INSIID-KAA--LRPTDVVLEVGPGTGNMTVKLLEKA--KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL 91 (285)
T ss_dssp HHHHHH-HTC--CCTTCEEEEECCTTSTTHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC
T ss_pred HHHHHH-hcC--CCCCCEEEEEcCcccHHHHHHHhhC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc
Confidence 344555 554 5567899999999999999999984 58999999 777765543 1589999999998 77
Q ss_pred CCceEEEecccccCCChhHHHHHHH--------------HH--HHhhccCCCCcEE
Q 023384 175 PPADAFLFKLVFHGLGDEDGLKILK--------------KR--RAAIASNGERGKV 214 (283)
Q Consensus 175 p~~D~v~~~~vlh~~~d~~~~~iL~--------------~~--~~~L~p~~~gg~l 214 (283)
+.||+|++.... +|+.+....+|. ++ +.+++| ||++
T Consensus 92 ~~fD~vv~nlpy-~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkP---Gg~~ 143 (285)
T 1zq9_A 92 PFFDTCVANLPY-QISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKP---GDKL 143 (285)
T ss_dssp CCCSEEEEECCG-GGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCT---TCTT
T ss_pred hhhcEEEEecCc-ccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCC---CCcc
Confidence 789998885443 455555555553 22 358899 6754
No 228
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.92 E-value=1.5e-09 Score=91.68 Aligned_cols=103 Identities=11% Similarity=0.104 Sum_probs=76.7
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCC-CeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC-CC-----C-CceEE
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPG-IKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ-FI-----P-PADAF 180 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~~-----p-~~D~v 180 (283)
.....+|||+|||+|..+..+++..++ .+++++|+ +..++.+++ ..+++++.+|+.+ +. + .||+|
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEE
Confidence 556789999999999999999999877 89999999 777766543 3489999999877 32 3 59999
Q ss_pred Eecc------cccC---CChh-------HHHHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 181 LFKL------VFHG---LGDE-------DGLKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 181 ~~~~------vlh~---~~d~-------~~~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
++.- +++. |+.+ ...++|+++.+.||| ||++++.....
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~lv~stcs~ 214 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKK---DGELVYSTCSM 214 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEE---EEEEEEEESCC
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCC---CCEEEEEECCC
Confidence 9862 2221 2221 236889999999999 78887766544
No 229
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.92 E-value=8.9e-09 Score=87.17 Aligned_cols=116 Identities=14% Similarity=0.094 Sum_probs=81.3
Q ss_pred cCCCCeEEEEcCCc------cHHHHHHHHHCC-CCeEEEeechHHHhcCCCCCCeEE-EEcCCCC-CCC-CceEEEeccc
Q 023384 116 FEGLGSLVDVGGGN------GSLSRIISEAFP-GIKCTVLDLPHVVANLPEADNLKY-IAGDMFQ-FIP-PADAFLFKLV 185 (283)
Q Consensus 116 ~~~~~~vlDvGgG~------G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~rv~~-~~~d~~~-~~p-~~D~v~~~~v 185 (283)
+....+|||||||+ |. ..+++..| +.+++++|+.+.+ .++++ +.+|+.+ +++ .||+|++...
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~v------~~v~~~i~gD~~~~~~~~~fD~Vvsn~~ 132 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFV------SDADSTLIGDCATVHTANKWDLIISDMY 132 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCB------CSSSEEEESCGGGCCCSSCEEEEEECCC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCCC------CCCEEEEECccccCCccCcccEEEEcCC
Confidence 55678999999944 66 55566776 6899999994331 36889 9999988 554 4999998533
Q ss_pred ccC-----CC----hhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHH
Q 023384 186 FHG-----LG----DEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWA 256 (283)
Q Consensus 186 lh~-----~~----d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~ 256 (283)
.+. .. .+....+|+.++++||| ||++++...... ..+++.
T Consensus 133 ~~~~g~~~~d~~~~~~l~~~~l~~a~r~Lkp---GG~~v~~~~~~~----------------------------~~~~l~ 181 (290)
T 2xyq_A 133 DPRTKHVTKENDSKEGFFTYLCGFIKQKLAL---GGSIAVKITEHS----------------------------WNADLY 181 (290)
T ss_dssp CCC---CCSCCCCCCTHHHHHHHHHHHHEEE---EEEEEEEECSSS----------------------------CCHHHH
T ss_pred ccccccccccccchHHHHHHHHHHHHHhcCC---CcEEEEEEeccC----------------------------CHHHHH
Confidence 211 01 12345789999999999 788777432110 124677
Q ss_pred HHHHHCCCCeeeEE
Q 023384 257 KLFFDACFSHYKIT 270 (283)
Q Consensus 257 ~ll~~aGf~~~~~~ 270 (283)
+++++.||..+++.
T Consensus 182 ~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 182 KLMGHFSWWTAFVT 195 (290)
T ss_dssp HHHTTEEEEEEEEE
T ss_pred HHHHHcCCcEEEEE
Confidence 88888888877765
No 230
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.92 E-value=2.8e-09 Score=93.99 Aligned_cols=121 Identities=15% Similarity=0.085 Sum_probs=90.0
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC-CCC--CceEEEecc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ-FIP--PADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~-~~p--~~D~v~~~~ 184 (283)
+.+..+|||+|||+|.+++.+++..+..+++++|+ +.+++.+++ .++++++.+|+.+ +.+ .||+|++.-
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~np 294 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNL 294 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEEC
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECC
Confidence 45668999999999999999999988779999999 888877764 2589999999998 554 499999965
Q ss_pred cccCCC-----hhH-HHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHH
Q 023384 185 VFHGLG-----DED-GLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKL 258 (283)
Q Consensus 185 vlh~~~-----d~~-~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l 258 (283)
..+... -++ -..+++.+++.| + |+++++.. +.+.+++.
T Consensus 295 Pyg~r~~~~~~~~~ly~~~~~~l~r~l-~----g~~~~i~~-------------------------------~~~~~~~~ 338 (373)
T 3tm4_A 295 PYGLKIGKKSMIPDLYMKFFNELAKVL-E----KRGVFITT-------------------------------EKKAIEEA 338 (373)
T ss_dssp CCC------CCHHHHHHHHHHHHHHHE-E----EEEEEEES-------------------------------CHHHHHHH
T ss_pred CCCcccCcchhHHHHHHHHHHHHHHHc-C----CeEEEEEC-------------------------------CHHHHHHH
Confidence 544221 111 256788888888 5 44444321 24567788
Q ss_pred HHHCCCCeeeEEEc
Q 023384 259 FFDACFSHYKITPI 272 (283)
Q Consensus 259 l~~aGf~~~~~~~~ 272 (283)
+.+.||+..+....
T Consensus 339 ~~~~G~~~~~~~~~ 352 (373)
T 3tm4_A 339 IAENGFEIIHHRVI 352 (373)
T ss_dssp HHHTTEEEEEEEEE
T ss_pred HHHcCCEEEEEEEE
Confidence 99999998887665
No 231
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.90 E-value=1.3e-08 Score=81.94 Aligned_cols=88 Identities=19% Similarity=0.167 Sum_probs=69.8
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCCCCCCceEEEecccccCCC
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQFIPPADAFLFKLVFHGLG 190 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~ 190 (283)
....+|||+|||+|.++..+++.. ..+++++|+ +.+++.+++ .-+++++.+|+.+-...||+|++.-.+|.+.
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~D~v~~~~p~~~~~ 126 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFNSRVDIVIMNPPFGSQR 126 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCCCCCSEEEECCCCSSSS
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcCCCCCEEEEcCCCcccc
Confidence 356799999999999999998873 347999999 777776654 2279999999987223699999999998887
Q ss_pred hhHHHHHHHHHHHhh
Q 023384 191 DEDGLKILKKRRAAI 205 (283)
Q Consensus 191 d~~~~~iL~~~~~~L 205 (283)
......+++++.+.+
T Consensus 127 ~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 127 KHADRPFLLKAFEIS 141 (207)
T ss_dssp TTTTHHHHHHHHHHC
T ss_pred CCchHHHHHHHHHhc
Confidence 655567788777775
No 232
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.89 E-value=7.8e-09 Score=86.99 Aligned_cols=120 Identities=16% Similarity=0.055 Sum_probs=89.0
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC-CC-CCceEEEeccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ-FI-PPADAFLFKLV 185 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~-~~-p~~D~v~~~~v 185 (283)
...+.+|||+|||+|.+++.+++. ...+++++|+ |..++.+++ .++++++.+|..+ .. ..||.|++...
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p 201 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCC
Confidence 566789999999999999999887 4578999999 888776654 6789999999988 32 24999988643
Q ss_pred ccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCC
Q 023384 186 FHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFS 265 (283)
Q Consensus 186 lh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 265 (283)
- .+...|..+.++|+| ||.+.+.+.+..+.. .....+.++++.++.|++
T Consensus 202 ~------~~~~~l~~a~~~lk~---gG~ih~~~~~~e~~~----------------------~~~~~e~i~~~~~~~g~~ 250 (278)
T 3k6r_A 202 V------RTHEFIPKALSIAKD---GAIIHYHNTVPEKLM----------------------PREPFETFKRITKEYGYD 250 (278)
T ss_dssp S------SGGGGHHHHHHHEEE---EEEEEEEEEEEGGGT----------------------TTTTHHHHHHHHHHTTCE
T ss_pred C------cHHHHHHHHHHHcCC---CCEEEEEeeeccccc----------------------chhHHHHHHHHHHHcCCc
Confidence 2 123678888899999 677766655432211 112456788899999987
Q ss_pred ee
Q 023384 266 HY 267 (283)
Q Consensus 266 ~~ 267 (283)
+.
T Consensus 251 v~ 252 (278)
T 3k6r_A 251 VE 252 (278)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 233
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.86 E-value=1.7e-08 Score=90.26 Aligned_cols=96 Identities=14% Similarity=0.128 Sum_probs=73.8
Q ss_pred CCCeEEEEcCCccHHHHHHHHHC-CCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCC-C-CCceEEEecccccC-----
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAF-PGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQF-I-PPADAFLFKLVFHG----- 188 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~-~-p~~D~v~~~~vlh~----- 188 (283)
...+|||+|||+|.++..+++++ +..+++++|+ +.+++.+ .+++++.+|+++. . ..||+|++.-....
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---~~~~~~~~D~~~~~~~~~fD~Ii~NPPy~~~~~~~ 115 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---PWAEGILADFLLWEPGEAFDLILGNPPYGIVGEAS 115 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---TTEEEEESCGGGCCCSSCEEEEEECCCCCCBSCTT
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---CCCcEEeCChhhcCccCCCCEEEECcCccCccccc
Confidence 45699999999999999999987 6789999999 7777666 6899999999983 3 35999999522211
Q ss_pred -----CChhHH-----------------HHHHHHHHHhhccCCCCcEEEEEee
Q 023384 189 -----LGDEDG-----------------LKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 189 -----~~d~~~-----------------~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
..++.. ..+++++.+.|+| ||+++++-+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~---~G~~~~i~p 165 (421)
T 2ih2_A 116 KYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKP---GGVLVFVVP 165 (421)
T ss_dssp TCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEE---EEEEEEEEE
T ss_pred ccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCC---CCEEEEEEC
Confidence 223221 2568999999999 788877653
No 234
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.85 E-value=1.2e-08 Score=88.31 Aligned_cols=96 Identities=16% Similarity=0.143 Sum_probs=71.5
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CC-CeEEEEcCCCCC-------CCCceEEE
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------AD-NLKYIAGDMFQF-------IPPADAFL 181 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~-rv~~~~~d~~~~-------~p~~D~v~ 181 (283)
...+|||+|||+|.++..+++.. .+++++|+ +.+++.+++ .+ +++++.+|+++. -..||+|+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~g--a~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAG--AEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCcEEEcccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 45799999999999999999864 49999999 888877664 22 599999999872 12599999
Q ss_pred ecccccC-------C-ChhHHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 182 FKLVFHG-------L-GDEDGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 182 ~~~vlh~-------~-~d~~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
+.-.... + ..++...+++++.+.|+| ||.+++..
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~Lkp---gG~lli~~ 272 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSP---KALGLVLT 272 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCT---TCCEEEEE
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCc---CcEEEEEE
Confidence 8322100 0 123456889999999999 68766654
No 235
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.83 E-value=5.8e-09 Score=89.14 Aligned_cols=89 Identities=16% Similarity=0.314 Sum_probs=64.6
Q ss_pred HHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC-CCC
Q 023384 104 TSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ-FIP 175 (283)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~~p 175 (283)
...+++ ..+ .....+|||||||+|.++..+++. ..+++++|+ +.+++.+++ .++++++.+|+.+ +.+
T Consensus 31 ~~~i~~-~~~--~~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~ 105 (299)
T 2h1r_A 31 LDKIIY-AAK--IKSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP 105 (299)
T ss_dssp HHHHHH-HHC--CCTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC
T ss_pred HHHHHH-hcC--CCCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc
Confidence 344555 444 566789999999999999999987 568999999 777766553 3689999999998 677
Q ss_pred CceEEEecccccCCChhHHHHHH
Q 023384 176 PADAFLFKLVFHGLGDEDGLKIL 198 (283)
Q Consensus 176 ~~D~v~~~~vlh~~~d~~~~~iL 198 (283)
.||+|++.-. ++++.+...++|
T Consensus 106 ~~D~Vv~n~p-y~~~~~~~~~ll 127 (299)
T 2h1r_A 106 KFDVCTANIP-YKISSPLIFKLI 127 (299)
T ss_dssp CCSEEEEECC-GGGHHHHHHHHH
T ss_pred cCCEEEEcCC-cccccHHHHHHH
Confidence 8999988554 456666666666
No 236
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.81 E-value=7.1e-09 Score=90.35 Aligned_cols=98 Identities=11% Similarity=0.162 Sum_probs=78.7
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCC-----CeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCCCCC--CceEEEecc
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPG-----IKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQFIP--PADAFLFKL 184 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~-----~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~~~p--~~D~v~~~~ 184 (283)
...+|||+|||+|.++..+++..+. .+++++|+ +.+++.++. ..++.+..+|.+++.+ .||+|++.-
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~~~~~fD~Ii~NP 209 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISDL 209 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCCCCCCEEEEEEEC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCccccCCccEEEECC
Confidence 4579999999999999999998765 68999999 777776654 3478999999998433 599999988
Q ss_pred cccCCChhHH----------------HHHHHHHHHhhccCCCCcEEEEEe
Q 023384 185 VFHGLGDEDG----------------LKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 185 vlh~~~d~~~----------------~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
.++.++.++. ..+++++.+.|+| ||+++++.
T Consensus 210 Pfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~---gG~~~~v~ 256 (344)
T 2f8l_A 210 PVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKP---GGYLFFLV 256 (344)
T ss_dssp CCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEE---EEEEEEEE
T ss_pred CCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCC---CCEEEEEE
Confidence 8776654432 2579999999999 78877765
No 237
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.80 E-value=1.1e-08 Score=91.72 Aligned_cols=103 Identities=16% Similarity=0.146 Sum_probs=78.9
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCC-C--CC--CceEEEe--
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQ-F--IP--PADAFLF-- 182 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~-~--~p--~~D~v~~-- 182 (283)
.....+|||+|||+|..+..+++..|+.+++++|+ +..++.+++ .-++.++.+|+.+ + ++ .||+|++
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 45668999999999999999999999899999999 666655543 3368899999987 3 33 4999996
Q ss_pred ----cccccCCChh-------HH-------HHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 183 ----KLVFHGLGDE-------DG-------LKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 183 ----~~vlh~~~d~-------~~-------~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
..+++..++. +. .++|+++.+.||| ||++++.+..+
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~Lkp---GG~lvystcs~ 377 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT---GGTLVYATCSV 377 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEE---EEEEEEEESCC
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCC---CCEEEEEECCC
Confidence 2344443331 11 4889999999999 78888877544
No 238
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.77 E-value=4.1e-08 Score=89.07 Aligned_cols=101 Identities=18% Similarity=0.150 Sum_probs=77.1
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC-C--CC-CceEEEec--
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFP-GIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ-F--IP-PADAFLFK-- 183 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~--~p-~~D~v~~~-- 183 (283)
...+|||+|||+|..+..+++..+ ..+++++|+ +..++.+++ ..++.++.+|..+ + .+ .||+|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 678999999999999999999875 578999999 777766553 3579999999987 3 34 49999982
Q ss_pred ----ccc-------cCCChhH-------HHHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 184 ----LVF-------HGLGDED-------GLKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 184 ----~vl-------h~~~d~~-------~~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
.++ ..|+.++ -.++|+++.+.||| ||++++.....
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lkp---GG~LvysTcs~ 249 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRP---GGTLVYSTCTL 249 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEESCC
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCC---CCEEEEecccC
Confidence 122 2344332 24789999999999 78887766544
No 239
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.77 E-value=7.8e-09 Score=93.06 Aligned_cols=103 Identities=12% Similarity=0.084 Sum_probs=76.6
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCC-CeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCC-C--CC-CceEEEec-
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPG-IKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQ-F--IP-PADAFLFK- 183 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~-~--~p-~~D~v~~~- 183 (283)
.....+|||+|||+|..+..+++..++ .+++++|+ +..++.+++ .-.+.++.+|..+ + .+ .||+|++.
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~ 178 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDA 178 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEEC
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECC
Confidence 566789999999999999999999875 78999999 777766654 2228999999876 3 23 49999961
Q ss_pred -----ccc-------cCCChhHH-------HHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 184 -----LVF-------HGLGDEDG-------LKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 184 -----~vl-------h~~~d~~~-------~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
.++ ..|+.++. .++|+++.+.||| ||+++.....+
T Consensus 179 PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp---GG~LvysTCs~ 232 (464)
T 3m6w_A 179 PCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGP---GGVLVYSTCTF 232 (464)
T ss_dssp CCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEE---EEEEEEEESCC
T ss_pred CcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC---CcEEEEEeccC
Confidence 122 23333332 6789999999999 78877765433
No 240
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.76 E-value=1.4e-07 Score=82.48 Aligned_cols=150 Identities=19% Similarity=0.261 Sum_probs=95.1
Q ss_pred CCeEEEEcCCccHHHHHH--------HHHC-------CCCeEEEeechHHH--------hcCCC-----------C-CC-
Q 023384 119 LGSLVDVGGGNGSLSRII--------SEAF-------PGIKCTVLDLPHVV--------ANLPE-----------A-DN- 162 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l--------~~~~-------p~~~~~~~D~~~~~--------~~a~~-----------~-~r- 162 (283)
..+|+|+|||+|..+..+ .+++ |.++++.-|+|..- ...++ . ..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 478999999999988876 3333 78899999986431 22111 0 11
Q ss_pred -eEEEEcCCCC-CCC--CceEEEecccccCCCh------------------------------------hHHHHHHHHHH
Q 023384 163 -LKYIAGDMFQ-FIP--PADAFLFKLVFHGLGD------------------------------------EDGLKILKKRR 202 (283)
Q Consensus 163 -v~~~~~d~~~-~~p--~~D~v~~~~vlh~~~d------------------------------------~~~~~iL~~~~ 202 (283)
+.-+.+.|.. .+| .+|+++++.+||.+++ .+...+|+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2346678887 566 3999999999998772 13456799999
Q ss_pred HhhccCCCCcEEEEEeeecCCCccch----hhh----hhhhhccccccc----------ccCCccCCHHHHHHHHH-HCC
Q 023384 203 AAIASNGERGKVIIIDIVINAEEEEH----ELT----ETKFLFDIVMSV----------NATGKERTESEWAKLFF-DAC 263 (283)
Q Consensus 203 ~~L~p~~~gg~lli~d~~~~~~~~~~----~~~----~~~~~~~~~~~~----------~~~~~~~t~~e~~~ll~-~aG 263 (283)
+.|+| ||++++.-...++..... ... ....+.++..-. ...-..++.+|++++++ ++|
T Consensus 213 ~eL~p---GG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~ 289 (374)
T 3b5i_A 213 AEVKR---GGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGS 289 (374)
T ss_dssp HHEEE---EEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCS
T ss_pred HHhCC---CCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCC
Confidence 99999 788877766554432100 000 000111111000 01123468999999998 599
Q ss_pred CCeeeEEE
Q 023384 264 FSHYKITP 271 (283)
Q Consensus 264 f~~~~~~~ 271 (283)
|++.++..
T Consensus 290 F~I~~le~ 297 (374)
T 3b5i_A 290 FAIDKLVV 297 (374)
T ss_dssp EEEEEEEE
T ss_pred cEEEEEEE
Confidence 99877643
No 241
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.74 E-value=1.7e-08 Score=90.75 Aligned_cols=103 Identities=15% Similarity=0.168 Sum_probs=75.8
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCC-CeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC-C--CC-CceEEEec
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPG-IKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ-F--IP-PADAFLFK 183 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~--~p-~~D~v~~~ 183 (283)
.....+|||+|||+|..+..+++..++ .+++++|+ +..++.+++ ..++.++.+|..+ + .+ .||+|++.
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~D 182 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVD 182 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEEC
Confidence 566789999999999999999998764 78999999 777766553 3579999999876 3 33 49999983
Q ss_pred c------cccC-------CChhH-------HHHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 184 L------VFHG-------LGDED-------GLKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 184 ~------vlh~-------~~d~~-------~~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
- +++. |+.++ ..++|+++.+.||| ||+++.....+
T Consensus 183 aPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp---GG~LvYsTCs~ 237 (456)
T 3m4x_A 183 APCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKN---KGQLIYSTCTF 237 (456)
T ss_dssp CCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEE---EEEEEEEESCC
T ss_pred CCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC---CcEEEEEEeec
Confidence 2 2221 22111 13789999999999 78877766444
No 242
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.71 E-value=2.4e-08 Score=82.72 Aligned_cols=82 Identities=12% Similarity=0.288 Sum_probs=59.4
Q ss_pred HHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEEcCCCC-CCCC-c
Q 023384 105 SFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----ADNLKYIAGDMFQ-FIPP-A 177 (283)
Q Consensus 105 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~rv~~~~~d~~~-~~p~-~ 177 (283)
..+++ .++ .....+|||||||+|.++..+++.. .+++++|+ +.+++.+++ .++++++.+|+.+ +++. .
T Consensus 20 ~~i~~-~~~--~~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~ 94 (244)
T 1qam_A 20 DKIMT-NIR--LNEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQ 94 (244)
T ss_dssp HHHHT-TCC--CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSC
T ss_pred HHHHH-hCC--CCCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCC
Confidence 44455 444 4566899999999999999999985 78999999 777766553 3689999999998 6662 3
Q ss_pred eEEEecccccCCCh
Q 023384 178 DAFLFKLVFHGLGD 191 (283)
Q Consensus 178 D~v~~~~vlh~~~d 191 (283)
+..++++.-++++.
T Consensus 95 ~~~vv~nlPy~~~~ 108 (244)
T 1qam_A 95 SYKIFGNIPYNIST 108 (244)
T ss_dssp CCEEEEECCGGGHH
T ss_pred CeEEEEeCCcccCH
Confidence 33444444444443
No 243
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.70 E-value=9.3e-09 Score=85.26 Aligned_cols=104 Identities=14% Similarity=0.232 Sum_probs=73.7
Q ss_pred HHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEEcCCCC-CCC---
Q 023384 105 SFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----ADNLKYIAGDMFQ-FIP--- 175 (283)
Q Consensus 105 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~rv~~~~~d~~~-~~p--- 175 (283)
..+++ .++ .....+|||||||+|.++..+++.. .+++++|+ +.+++.+++ .++++++.+|+.+ +++
T Consensus 19 ~~i~~-~~~--~~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~ 93 (245)
T 1yub_A 19 NQIIK-QLN--LKETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQ 93 (245)
T ss_dssp HHHHH-HCC--CCSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSS
T ss_pred HHHHH-hcC--CCCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCC
Confidence 44555 444 5566799999999999999999985 78999999 778877765 3579999999998 655
Q ss_pred CceEEEecccccCCChhHHHHHH--------------HHHHHhhccCCCCcEEEEEe
Q 023384 176 PADAFLFKLVFHGLGDEDGLKIL--------------KKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 176 ~~D~v~~~~vlh~~~d~~~~~iL--------------~~~~~~L~p~~~gg~lli~d 218 (283)
.| .|+ ++.-++.+.+....++ +.+.+.|+| ||++.++.
T Consensus 94 ~f-~vv-~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~---~G~l~v~~ 145 (245)
T 1yub_A 94 RY-KIV-GNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDI---HRTLGLLL 145 (245)
T ss_dssp EE-EEE-EECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCG---GGSHHHHT
T ss_pred Cc-EEE-EeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCC---CCchhhhh
Confidence 25 333 3333333333333333 568899999 68776544
No 244
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.68 E-value=3.5e-08 Score=87.27 Aligned_cols=98 Identities=13% Similarity=0.093 Sum_probs=71.3
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CC-CeEEEEcCCCC--C-C---C-CceEE
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------AD-NLKYIAGDMFQ--F-I---P-PADAF 180 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~-rv~~~~~d~~~--~-~---p-~~D~v 180 (283)
....+|||+|||+|.++..+++.. ..+++++|+ +.+++.+++ .+ +++|+.+|+++ + . + .||+|
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~I 289 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII 289 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEE
Confidence 456899999999999999999862 348999999 888877664 23 89999999977 2 1 2 59999
Q ss_pred Eecccc-----cCCCh--hHHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 181 LFKLVF-----HGLGD--EDGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 181 ~~~~vl-----h~~~d--~~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
++.-.. +...+ +...++++.+.+.|+| ||.+++..
T Consensus 290 i~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~p---gG~l~~~~ 331 (385)
T 2b78_A 290 IIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSE---NGLIIAST 331 (385)
T ss_dssp EECCCCC-----CCCCHHHHHHHHHHHHHHTEEE---EEEEEEEE
T ss_pred EECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCC---CcEEEEEe
Confidence 984322 11221 3345678899999999 56655543
No 245
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.67 E-value=9.5e-08 Score=84.83 Aligned_cols=98 Identities=7% Similarity=0.003 Sum_probs=73.1
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------C-C-CeEEEEcCCCCCC-------CCceEE
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------A-D-NLKYIAGDMFQFI-------PPADAF 180 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-~-rv~~~~~d~~~~~-------p~~D~v 180 (283)
....+|||+|||+|.++..+++.. ..+++++|+ +..++.+++ . . +++++.+|+++.. ..||+|
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 456899999999999999999874 458999999 788776654 2 3 7999999998721 259999
Q ss_pred EecccccCCC-------hhHHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 181 LFKLVFHGLG-------DEDGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 181 ~~~~vlh~~~-------d~~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
++.-.....+ ......++.++.+.|+| ||.+++..
T Consensus 298 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~ 339 (396)
T 3c0k_A 298 VMDPPKFVENKSQLMGACRGYKDINMLAIQLLNE---GGILLTFS 339 (396)
T ss_dssp EECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEE---EEEEEEEE
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCC---CcEEEEEe
Confidence 9853221110 13456889999999999 67666544
No 246
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.66 E-value=9.6e-08 Score=84.38 Aligned_cols=97 Identities=10% Similarity=0.088 Sum_probs=73.7
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCCCC------C-CceEEEec
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQFI------P-PADAFLFK 183 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~~~------p-~~D~v~~~ 183 (283)
...+|||+|||+|.++..+++. ..+++++|+ +.+++.+++ ..+++++.+|+++.. + .||+|++.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 5679999999999999999998 668999999 888877664 245999999998721 2 59999984
Q ss_pred ccccCCCh-------hHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 184 LVFHGLGD-------EDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 184 ~vlh~~~d-------~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
-..+..+. +....+++++.+.|+| ||.+++...
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~ 326 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKE---GGILATASC 326 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEE---EEEEEEEEC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCC---CCEEEEEEC
Confidence 33222211 3456789999999999 677766653
No 247
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.65 E-value=4.2e-08 Score=85.15 Aligned_cols=94 Identities=18% Similarity=0.187 Sum_probs=73.6
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCCCCCCceEEEeccccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQFIPPADAFLFKLVFH 187 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~~~p~~D~v~~~~vlh 187 (283)
+....+|||+|||+|.++.. ++ ...+++++|+ +.+++.+++ .++++++.+|.++....||+|++.-.-
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~~~fD~Vi~dpP~- 268 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIMNLPK- 268 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEECCTT-
T ss_pred cCCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhcCCCcEEEECCcH-
Confidence 35668999999999999999 76 5789999999 888776654 368999999999844569999984221
Q ss_pred CCChhHHHHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 188 GLGDEDGLKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 188 ~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
....+++.+.+.|+| ||.+++.+...
T Consensus 269 -----~~~~~l~~~~~~L~~---gG~l~~~~~~~ 294 (336)
T 2yx1_A 269 -----FAHKFIDKALDIVEE---GGVIHYYTIGK 294 (336)
T ss_dssp -----TGGGGHHHHHHHEEE---EEEEEEEEEES
T ss_pred -----hHHHHHHHHHHHcCC---CCEEEEEEeec
Confidence 123789999999999 67777766543
No 248
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.64 E-value=3.1e-07 Score=82.40 Aligned_cols=84 Identities=10% Similarity=0.164 Sum_probs=62.2
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCCCC-----C--CceEEE
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQFI-----P--PADAFL 181 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~~~-----p--~~D~v~ 181 (283)
.....+|||+|||+|.++..+++. ..+++++|+ +++++.|++ ..+++|+.+|+.+.+ + .||+|+
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv 361 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVL 361 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEE
T ss_pred CCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEE
Confidence 456689999999999999999987 678999999 888877664 348999999998732 1 499999
Q ss_pred ecccccCCChhHHHHHHHHHHHhhcc
Q 023384 182 FKLVFHGLGDEDGLKILKKRRAAIAS 207 (283)
Q Consensus 182 ~~~vlh~~~d~~~~~iL~~~~~~L~p 207 (283)
+.- +...+..+++.+.+ ++|
T Consensus 362 ~dP-----Pr~g~~~~~~~l~~-~~p 381 (433)
T 1uwv_A 362 LDP-----ARAGAAGVMQQIIK-LEP 381 (433)
T ss_dssp ECC-----CTTCCHHHHHHHHH-HCC
T ss_pred ECC-----CCccHHHHHHHHHh-cCC
Confidence 832 22222345555543 677
No 249
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.63 E-value=4e-07 Score=79.77 Aligned_cols=149 Identities=16% Similarity=0.145 Sum_probs=91.7
Q ss_pred CCeEEEEcCCccHHHHHHHHH-----------------CCCCeEEEeech-----------HHH-hcC----CCCCCeEE
Q 023384 119 LGSLVDVGGGNGSLSRIISEA-----------------FPGIKCTVLDLP-----------HVV-ANL----PEADNLKY 165 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~-----------------~p~~~~~~~D~~-----------~~~-~~a----~~~~rv~~ 165 (283)
..+|+|+||++|..+..+... .|.++++.-|+| +.. +.. ....+-.|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 578999999999999887766 477889999987 111 100 01112234
Q ss_pred ---EEcCCCC-CCC--CceEEEecccccCCChhH-------------------------H------------HHHHHHHH
Q 023384 166 ---IAGDMFQ-FIP--PADAFLFKLVFHGLGDED-------------------------G------------LKILKKRR 202 (283)
Q Consensus 166 ---~~~d~~~-~~p--~~D~v~~~~vlh~~~d~~-------------------------~------------~~iL~~~~ 202 (283)
++|.|.. .+| .+|+++++.+||.+++.. + ..+|+..+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567776 566 399999999999766421 1 22388889
Q ss_pred HhhccCCCCcEEEEEeeecCCC--ccchhhhhhhhhccccccc----------ccCCccCCHHHHHHHHHHCC-CCeeeE
Q 023384 203 AAIASNGERGKVIIIDIVINAE--EEEHELTETKFLFDIVMSV----------NATGKERTESEWAKLFFDAC-FSHYKI 269 (283)
Q Consensus 203 ~~L~p~~~gg~lli~d~~~~~~--~~~~~~~~~~~~~~~~~~~----------~~~~~~~t~~e~~~ll~~aG-f~~~~~ 269 (283)
+.|+| ||++++.-...++. ...........+.++.... ...-..++.+|++++++++| |++.++
T Consensus 213 ~eL~p---GG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~l 289 (384)
T 2efj_A 213 EELIS---RGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYL 289 (384)
T ss_dssp HHEEE---EEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEE
T ss_pred HHhcc---CCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEE
Confidence 99999 78877766655543 2110000111122111100 01234468999999999985 777665
Q ss_pred E
Q 023384 270 T 270 (283)
Q Consensus 270 ~ 270 (283)
.
T Consensus 290 e 290 (384)
T 2efj_A 290 E 290 (384)
T ss_dssp E
T ss_pred E
Confidence 3
No 250
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.62 E-value=4.4e-08 Score=86.97 Aligned_cols=98 Identities=14% Similarity=0.124 Sum_probs=74.4
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCCC--C----C-CceEEEe
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQF--I----P-PADAFLF 182 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~~--~----p-~~D~v~~ 182 (283)
...+|||+|||+|.++..+++. +..+++++|+ +.+++.+++ .++++++.+|+++. . + .||+|++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 6689999999999999999986 4458999999 878776664 22899999998872 1 2 5999998
Q ss_pred cccccCCCh-------hHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 183 KLVFHGLGD-------EDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 183 ~~vlh~~~d-------~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
.-..+..+. .....+++++.+.|+| ||.+++...
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~lv~~~~ 336 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKD---GGILVTCSC 336 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEE---EEEEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC---CcEEEEEEC
Confidence 543222222 4456889999999999 677766653
No 251
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.62 E-value=1.1e-07 Score=80.63 Aligned_cols=79 Identities=15% Similarity=0.283 Sum_probs=62.8
Q ss_pred HHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEEcCCCC-CCCC-
Q 023384 104 TSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----ADNLKYIAGDMFQ-FIPP- 176 (283)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~rv~~~~~d~~~-~~p~- 176 (283)
...+++ ..+ .....+|||||||+|.++..+++. ..+++++|+ +.+++.+++ .++++++.+|+.+ +++.
T Consensus 39 ~~~Iv~-~l~--~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~ 113 (295)
T 3gru_A 39 VNKAVE-SAN--LTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKL 113 (295)
T ss_dssp HHHHHH-HTT--CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGS
T ss_pred HHHHHH-hcC--CCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccC
Confidence 345555 554 566789999999999999999998 578999999 777776654 4789999999998 7664
Q ss_pred -ceEEEeccccc
Q 023384 177 -ADAFLFKLVFH 187 (283)
Q Consensus 177 -~D~v~~~~vlh 187 (283)
||+|+.+...|
T Consensus 114 ~fD~Iv~NlPy~ 125 (295)
T 3gru_A 114 DFNKVVANLPYQ 125 (295)
T ss_dssp CCSEEEEECCGG
T ss_pred CccEEEEeCccc
Confidence 99998765443
No 252
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.61 E-value=2.3e-07 Score=82.03 Aligned_cols=98 Identities=11% Similarity=0.090 Sum_probs=70.9
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCCC---CC-CceEEEecccc
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQF---IP-PADAFLFKLVF 186 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~~---~p-~~D~v~~~~vl 186 (283)
.+..+|||+|||+|.++..+++. +.+++++|+ +.+++.+++ .-..++..+|.++. .+ .||+|++.-..
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~--ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~ 290 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARK--GAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPT 290 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCC
T ss_pred cCCCeEEEcccchhHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCc
Confidence 34689999999999999999987 445999999 888877664 22235779998872 22 39999985433
Q ss_pred cCCCh-------hHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 187 HGLGD-------EDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 187 h~~~d-------~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
...+. ..-.++++.+.+.|+| ||.+++...
T Consensus 291 f~~~~~~~~~~~~~~~~ll~~a~~~Lkp---GG~Lv~~s~ 327 (393)
T 4dmg_A 291 LVKRPEELPAMKRHLVDLVREALRLLAE---EGFLWLSSC 327 (393)
T ss_dssp CCSSGGGHHHHHHHHHHHHHHHHHTEEE---EEEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcCC---CCEEEEEEC
Confidence 22111 2335789999999999 787776654
No 253
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.61 E-value=1.2e-07 Score=83.99 Aligned_cols=103 Identities=8% Similarity=0.033 Sum_probs=76.9
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCC--------------------------------------CeEEEeec-hHHHhc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPG--------------------------------------IKCTVLDL-PHVVAN 156 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~--------------------------------------~~~~~~D~-~~~~~~ 156 (283)
+.+...|||.+||+|.++++.+....+ .+++++|+ +.+++.
T Consensus 199 ~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~ 278 (393)
T 3k0b_A 199 WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEI 278 (393)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHH
Confidence 566789999999999999988876543 56999999 888877
Q ss_pred CCC-------CCCeEEEEcCCCC-CCC-CceEEEecccccC-CC-hhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 157 LPE-------ADNLKYIAGDMFQ-FIP-PADAFLFKLVFHG-LG-DEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 157 a~~-------~~rv~~~~~d~~~-~~p-~~D~v~~~~vlh~-~~-d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
|++ .++++++.+|+++ +.+ .||+|++.-..+. .. .++...+.+.+.+.|++ -+|++++|+..
T Consensus 279 Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~-~~g~~~~iit~ 351 (393)
T 3k0b_A 279 AKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKR-MPTWSVYVLTS 351 (393)
T ss_dssp HHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHT-CTTCEEEEEEC
T ss_pred HHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhc-CCCCEEEEEEC
Confidence 664 4579999999998 544 4999999743321 12 24566777777777776 33788888764
No 254
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.57 E-value=3.8e-07 Score=80.35 Aligned_cols=103 Identities=12% Similarity=0.036 Sum_probs=78.6
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCC--------------------------------------CeEEEeec-hHHHhc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPG--------------------------------------IKCTVLDL-PHVVAN 156 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~--------------------------------------~~~~~~D~-~~~~~~ 156 (283)
+.+...|||.+||+|.++++.+....+ .+++++|+ +.+++.
T Consensus 192 ~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~ 271 (384)
T 3ldg_A 192 WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEI 271 (384)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHH
Confidence 566789999999999999998875544 56999999 888877
Q ss_pred CCC-------CCCeEEEEcCCCC-CCC-CceEEEecccccC-C-ChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 157 LPE-------ADNLKYIAGDMFQ-FIP-PADAFLFKLVFHG-L-GDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 157 a~~-------~~rv~~~~~d~~~-~~p-~~D~v~~~~vlh~-~-~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
|++ .++++++.+|+.+ +.+ .||+|++.=..+. + ..++...+.+.+.+.|++ -+|+++.|+..
T Consensus 272 Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~-~~g~~~~iit~ 344 (384)
T 3ldg_A 272 ARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAP-LKTWSQFILTN 344 (384)
T ss_dssp HHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTT-CTTSEEEEEES
T ss_pred HHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhh-CCCcEEEEEEC
Confidence 664 4579999999998 544 5999999744321 2 345677788888888876 33788888764
No 255
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.53 E-value=1.1e-07 Score=85.66 Aligned_cols=100 Identities=15% Similarity=0.121 Sum_probs=75.6
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHC-------------CCCeEEEeec-hHHHhcCCC------C--CCeEEEEcCCCC-C
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAF-------------PGIKCTVLDL-PHVVANLPE------A--DNLKYIAGDMFQ-F 173 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~-------------p~~~~~~~D~-~~~~~~a~~------~--~rv~~~~~d~~~-~ 173 (283)
....+|+|.|||+|.++..+++.. +..+++++|+ +.+++.|+. . .++.+..+|.+. +
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~ 249 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKE 249 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSC
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCc
Confidence 445799999999999999988764 4578999999 777766543 1 168899999998 4
Q ss_pred CC-CceEEEecccccCCChh---------------HHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 174 IP-PADAFLFKLVFHGLGDE---------------DGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 174 ~p-~~D~v~~~~vlh~~~d~---------------~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
.. .||+|++.-.++..... .-..+++++.+.|+| ||++.++-+
T Consensus 250 ~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~---gG~~a~V~p 308 (445)
T 2okc_A 250 PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKT---GGRAAVVLP 308 (445)
T ss_dssp CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEE---EEEEEEEEE
T ss_pred ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhcc---CCEEEEEEC
Confidence 43 59999998666543211 124779999999999 798887764
No 256
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.50 E-value=2.5e-07 Score=77.97 Aligned_cols=98 Identities=14% Similarity=0.211 Sum_probs=74.0
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----------CCCeEEEEcCCCCCC----CCceE
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----------ADNLKYIAGDMFQFI----PPADA 179 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------~~rv~~~~~d~~~~~----p~~D~ 179 (283)
-++.++||-||||.|..++++++..|..+++++|+ |.+++.+++ ..|++++.+|.++-+ ..||+
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDv 160 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEE
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCE
Confidence 35668999999999999999998877789999999 888876653 589999999998832 24999
Q ss_pred EEecccccCCChh---HHHHHHHHHHHhhccCCCCcEEEEE
Q 023384 180 FLFKLVFHGLGDE---DGLKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 180 v~~~~vlh~~~d~---~~~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
|++-..= ..... -....++.++++|+| ||.++..
T Consensus 161 Ii~D~~d-p~~~~~~L~t~eFy~~~~~~L~p---~Gv~v~q 197 (294)
T 3o4f_A 161 IISDCTD-PIGPGESLFTSAFYEGCKRCLNP---GGIFVAQ 197 (294)
T ss_dssp EEESCCC-CCCTTCCSSCCHHHHHHHHTEEE---EEEEEEE
T ss_pred EEEeCCC-cCCCchhhcCHHHHHHHHHHhCC---CCEEEEe
Confidence 9984321 11111 124679999999999 5655543
No 257
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.49 E-value=3.5e-07 Score=80.71 Aligned_cols=103 Identities=15% Similarity=0.080 Sum_probs=77.3
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCC--------------------------------------CeEEEeec-hHHHhc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPG--------------------------------------IKCTVLDL-PHVVAN 156 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~--------------------------------------~~~~~~D~-~~~~~~ 156 (283)
+.+..+|||++||+|.++++.+....+ .+++++|+ +.+++.
T Consensus 193 ~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~ 272 (385)
T 3ldu_A 193 WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDI 272 (385)
T ss_dssp CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHH
Confidence 556789999999999999998876432 57999999 888887
Q ss_pred CCC-------CCCeEEEEcCCCC-CCC-CceEEEecccccC-CC-hhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 157 LPE-------ADNLKYIAGDMFQ-FIP-PADAFLFKLVFHG-LG-DEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 157 a~~-------~~rv~~~~~d~~~-~~p-~~D~v~~~~vlh~-~~-d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
|++ .++++|..+|+.+ +.+ .+|+|++.-..+. +. .++...+.+.+.+.|++ -+|+++.++..
T Consensus 273 Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~-~~g~~~~iit~ 345 (385)
T 3ldu_A 273 ARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRK-LKNWSYYLITS 345 (385)
T ss_dssp HHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHT-SBSCEEEEEES
T ss_pred HHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhh-CCCCEEEEEEC
Confidence 765 3479999999998 444 4999999654432 22 34566778888888876 23678877753
No 258
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.49 E-value=2.1e-07 Score=80.67 Aligned_cols=97 Identities=15% Similarity=0.175 Sum_probs=68.1
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--C------------CCeEEEEcCCCC--C-----CC
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE--A------------DNLKYIAGDMFQ--F-----IP 175 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~------------~rv~~~~~d~~~--~-----~p 175 (283)
+..+|||||||+|..+.++++..+ .+++++|+ +.+++.+++ . +|++++.+|.++ . -.
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 568999999999999999998765 78999999 888876653 0 279999999987 2 12
Q ss_pred CceEEEecccc-c-CCCh--hHHHHHHHHH----HHhhccCCCCcEEEEEee
Q 023384 176 PADAFLFKLVF-H-GLGD--EDGLKILKKR----RAAIASNGERGKVIIIDI 219 (283)
Q Consensus 176 ~~D~v~~~~vl-h-~~~d--~~~~~iL~~~----~~~L~p~~~gg~lli~d~ 219 (283)
.||+|++--.- . .... -.....++.+ +++|+| ||.+ +++.
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~p---gGil-v~qs 314 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQ---DGKY-FTQG 314 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEE---EEEE-EEEE
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCC---CcEE-EEEc
Confidence 49999985432 1 0011 0123455555 999999 4554 4443
No 259
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.49 E-value=1.1e-07 Score=88.40 Aligned_cols=127 Identities=17% Similarity=0.194 Sum_probs=82.4
Q ss_pred chhhHhhcCccHHHHHHHHhhhhhhhhHHHHHHHhhhhh--cCCCCeEEEEcCCccHHHHHHHHHC----CCCeEEEeec
Q 023384 77 KFWEFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQI--FEGLGSLVDVGGGNGSLSRIISEAF----PGIKCTVLDL 150 (283)
Q Consensus 77 ~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~--~~~~~~vlDvGgG~G~~~~~l~~~~----p~~~~~~~D~ 150 (283)
..||.+++++-.-..|.+++... +.+ ..... ......|+|||||+|-++...+++. -.+++.+++-
T Consensus 322 ~tYevFEkD~vKy~~Ye~AI~~A-------l~d-~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEk 393 (637)
T 4gqb_A 322 QTYEVFEKDPIKYSQYQQAIYKC-------LLD-RVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEK 393 (637)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH-------HHH-HSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred hhhhhhcCChhhHHHHHHHHHHH-------HHH-hhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 34777888887777776665432 111 11100 1233579999999999955443332 2347889998
Q ss_pred hHHHhcCCC-------CCCeEEEEcCCCC-CCCC-ceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEE
Q 023384 151 PHVVANLPE-------ADNLKYIAGDMFQ-FIPP-ADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKV 214 (283)
Q Consensus 151 ~~~~~~a~~-------~~rv~~~~~d~~~-~~p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~l 214 (283)
.++...+.+ .++|+++.+|+.+ ..|. +|+|++-..=...-.|-...+|....+.||| ||.+
T Consensus 394 np~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKP---gGim 463 (637)
T 4gqb_A 394 NPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSPECLDGAQHFLKD---DGVS 463 (637)
T ss_dssp CHHHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEE---EEEE
T ss_pred CHHHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEEcCcccccccCCHHHHHHHHHhcCC---CcEE
Confidence 445444433 7899999999999 7774 9999875433333344456778777889999 5654
No 260
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.48 E-value=1.8e-07 Score=79.73 Aligned_cols=77 Identities=25% Similarity=0.285 Sum_probs=61.6
Q ss_pred HHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCC-C--C-
Q 023384 105 SFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQ-F--I- 174 (283)
Q Consensus 105 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~-~--~- 174 (283)
..+++ .+. .....+|||+|||+|..+..+++++|+.+++++|+ +.+++.+++ .++++++.+|+.+ + +
T Consensus 16 ~e~l~-~L~--~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~ 92 (301)
T 1m6y_A 16 REVIE-FLK--PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLK 92 (301)
T ss_dssp HHHHH-HHC--CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHH
T ss_pred HHHHH-hcC--CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHH
Confidence 44455 444 55678999999999999999999999899999999 888877654 3689999999876 3 1
Q ss_pred ----CCceEEEecc
Q 023384 175 ----PPADAFLFKL 184 (283)
Q Consensus 175 ----p~~D~v~~~~ 184 (283)
..||.|++.-
T Consensus 93 ~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 93 TLGIEKVDGILMDL 106 (301)
T ss_dssp HTTCSCEEEEEEEC
T ss_pred hcCCCCCCEEEEcC
Confidence 3599998743
No 261
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.46 E-value=4.6e-07 Score=75.16 Aligned_cols=93 Identities=22% Similarity=0.310 Sum_probs=65.3
Q ss_pred HHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--CCCeEEEEcCCCC-CCCC-c-
Q 023384 104 TSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE--ADNLKYIAGDMFQ-FIPP-A- 177 (283)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~~rv~~~~~d~~~-~~p~-~- 177 (283)
...+++ ..+ .....+|||||||+|.++..+++. +..+++++|+ +.+++.+++ ..+++++.+|+.+ +++. +
T Consensus 20 ~~~iv~-~~~--~~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~ 95 (249)
T 3ftd_A 20 LKKIAE-ELN--IEEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFCSLGK 95 (249)
T ss_dssp HHHHHH-HTT--CCTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGSCS
T ss_pred HHHHHH-hcC--CCCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhHccC
Confidence 344555 554 556789999999999999999987 5679999999 777776654 4689999999998 6653 2
Q ss_pred eEEEecccccCCChhHHHHHHHHHHHh
Q 023384 178 DAFLFKLVFHGLGDEDGLKILKKRRAA 204 (283)
Q Consensus 178 D~v~~~~vlh~~~d~~~~~iL~~~~~~ 204 (283)
+.+++.+.=++.+. .++.++.+.
T Consensus 96 ~~~vv~NlPy~i~~----~il~~ll~~ 118 (249)
T 3ftd_A 96 ELKVVGNLPYNVAS----LIIENTVYN 118 (249)
T ss_dssp SEEEEEECCTTTHH----HHHHHHHHT
T ss_pred CcEEEEECchhccH----HHHHHHHhc
Confidence 34555554444443 444444443
No 262
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.45 E-value=5.1e-07 Score=75.70 Aligned_cols=89 Identities=18% Similarity=0.164 Sum_probs=65.0
Q ss_pred HHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---CCCeEEEEcCCCC-CCC---C
Q 023384 105 SFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE---ADNLKYIAGDMFQ-FIP---P 176 (283)
Q Consensus 105 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---~~rv~~~~~d~~~-~~p---~ 176 (283)
..+++ ..+ .... +|||||||+|.++..++++. .+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .
T Consensus 37 ~~Iv~-~~~--~~~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~ 110 (271)
T 3fut_A 37 RRIVE-AAR--PFTG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQ 110 (271)
T ss_dssp HHHHH-HHC--CCCS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCT
T ss_pred HHHHH-hcC--CCCC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccC
Confidence 44555 554 5566 99999999999999999984 68999999 777766554 4689999999998 665 4
Q ss_pred ceEEEecccccCCChhHHHHHHHH
Q 023384 177 ADAFLFKLVFHGLGDEDGLKILKK 200 (283)
Q Consensus 177 ~D~v~~~~vlh~~~d~~~~~iL~~ 200 (283)
+|.|+.+- -++.+.+-..++|..
T Consensus 111 ~~~iv~Nl-Py~iss~il~~ll~~ 133 (271)
T 3fut_A 111 GSLLVANL-PYHIATPLVTRLLKT 133 (271)
T ss_dssp TEEEEEEE-CSSCCHHHHHHHHHH
T ss_pred ccEEEecC-cccccHHHHHHHhcC
Confidence 67665544 445566555555544
No 263
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=98.43 E-value=6e-06 Score=71.31 Aligned_cols=142 Identities=13% Similarity=0.119 Sum_probs=104.4
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC---------------------------CCCeEEEEcC
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPE---------------------------ADNLKYIAGD 169 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~---------------------------~~rv~~~~~d 169 (283)
.+...||.+|||.......+...+|+++++-+|.|++++.-++ .++..++..|
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 4568999999999999999999889999999999988754321 2689999999
Q ss_pred CCC-CC----------CC-ceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhh-h-h
Q 023384 170 MFQ-FI----------PP-ADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTET-K-F 235 (283)
Q Consensus 170 ~~~-~~----------p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~-~-~ 235 (283)
+.+ +. ++ ..++++--+|+.++.+++.++|+.+.+.. | +|.+++.|.+.+..... ++... . .
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~---~~~~v~~e~i~~~~~~~-~fg~~m~~~ 250 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-S---HGLWISYDPIGGSQPND-RFGAIMQSN 250 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-S---SEEEEEEEECCCCSTTC-CHHHHHHHH
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-C---CcEEEEEeccCCCCCcc-hHHHHHHHH
Confidence 987 32 12 57889999999999999999999999987 4 48888899887722111 11110 0 0
Q ss_pred h---cccccccccCCccCCHHHHHHHHHHCCCC
Q 023384 236 L---FDIVMSVNATGKERTESEWAKLFFDACFS 265 (283)
Q Consensus 236 ~---~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 265 (283)
. ....+. ......+.++..+.|.++||+
T Consensus 251 l~~~rg~~l~--~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 251 LKESRNLEMP--TLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHHHHCCCCT--TTTTTCSHHHHHGGGTTSSEE
T ss_pred hhcccCCccc--ccccCCCHHHHHHHHHHCCCC
Confidence 0 111111 112345889999999999997
No 264
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.42 E-value=1.7e-06 Score=75.23 Aligned_cols=150 Identities=16% Similarity=0.185 Sum_probs=93.1
Q ss_pred CCCCeEEEEcCCccHHHHHHHHH----------------CCCCeEEEeechHH-H----hcCCC---CCCe---EEEEcC
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEA----------------FPGIKCTVLDLPHV-V----ANLPE---ADNL---KYIAGD 169 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~----------------~p~~~~~~~D~~~~-~----~~a~~---~~rv---~~~~~d 169 (283)
+...+|+|+||++|..+..+... .|.++++.-|+|.. . ..... ..+- .-++|.
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGS 129 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESC
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchh
Confidence 34467999999999877654433 56788899999642 1 11111 1122 235678
Q ss_pred CCC-CCC--CceEEEecccccCCCh-------------------------------hHHHHHHHHHHHhhccCCCCcEEE
Q 023384 170 MFQ-FIP--PADAFLFKLVFHGLGD-------------------------------EDGLKILKKRRAAIASNGERGKVI 215 (283)
Q Consensus 170 ~~~-~~p--~~D~v~~~~vlh~~~d-------------------------------~~~~~iL~~~~~~L~p~~~gg~ll 215 (283)
|.. .+| .+|+++++..||.+++ .+...+|+..++.|+| ||+++
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~p---GG~mv 206 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVP---GGRMV 206 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCT---TCEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CceEE
Confidence 887 567 3999999999997764 1334569999999999 78888
Q ss_pred EEeeecCCCccchh----hh--hhhhhccccccc----------ccCCccCCHHHHHHHHHHCCC-CeeeE
Q 023384 216 IIDIVINAEEEEHE----LT--ETKFLFDIVMSV----------NATGKERTESEWAKLFFDACF-SHYKI 269 (283)
Q Consensus 216 i~d~~~~~~~~~~~----~~--~~~~~~~~~~~~----------~~~~~~~t~~e~~~ll~~aGf-~~~~~ 269 (283)
+.-...++...... +. ....+.++..-. ...-..++.+|++++++++|+ ++.++
T Consensus 207 l~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~ 277 (359)
T 1m6e_X 207 LTILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHI 277 (359)
T ss_dssp EEEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEE
T ss_pred EEEecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEE
Confidence 77766655421000 00 011121111100 012345689999999999964 66554
No 265
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.39 E-value=1.5e-06 Score=72.24 Aligned_cols=67 Identities=19% Similarity=0.307 Sum_probs=53.7
Q ss_pred HHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEEcCCCC-CCC
Q 023384 104 TSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----ADNLKYIAGDMFQ-FIP 175 (283)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~rv~~~~~d~~~-~~p 175 (283)
...+++ ..+ .....+|||||||+|.++..++++. .+++++|+ +.+++.+++ .++++++.+|+.+ +++
T Consensus 18 ~~~iv~-~~~--~~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~ 90 (255)
T 3tqs_A 18 LQKIVS-AIH--PQKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFS 90 (255)
T ss_dssp HHHHHH-HHC--CCTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGG
T ss_pred HHHHHH-hcC--CCCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHH
Confidence 344555 554 5667899999999999999999874 68999999 777776654 4789999999998 653
No 266
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.39 E-value=8.7e-07 Score=79.19 Aligned_cols=91 Identities=12% Similarity=0.134 Sum_probs=65.8
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCCCCC-CceEEEeccccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQFIP-PADAFLFKLVFH 187 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~~~p-~~D~v~~~~vlh 187 (283)
.....+|||+|||+|.++..+++. ..+++++|+ +++++.+++ .. ++|+.+|+++..+ .||+|++.-.-.
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~~~fD~Vv~dPPr~ 364 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSVKGFDTVIVDPPRA 364 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCCTTCSEEEECCCTT
T ss_pred cCCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCccCCCEEEEcCCcc
Confidence 455689999999999999999886 468999999 888877764 23 9999999998444 699999844321
Q ss_pred CCChhHHHHHHHHHHHhhccCCCCcEEEEE
Q 023384 188 GLGDEDGLKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 188 ~~~d~~~~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
... ..+++.+. .|+| +|.+++.
T Consensus 365 g~~----~~~~~~l~-~l~p---~givyvs 386 (425)
T 2jjq_A 365 GLH----PRLVKRLN-REKP---GVIVYVS 386 (425)
T ss_dssp CSC----HHHHHHHH-HHCC---SEEEEEE
T ss_pred chH----HHHHHHHH-hcCC---CcEEEEE
Confidence 111 13455554 4898 5655553
No 267
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.37 E-value=1e-06 Score=83.53 Aligned_cols=99 Identities=11% Similarity=0.146 Sum_probs=72.8
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------C-CCeEEEEcCCCCC---CC-CceEEEe
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------A-DNLKYIAGDMFQF---IP-PADAFLF 182 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~-~rv~~~~~d~~~~---~p-~~D~v~~ 182 (283)
.....+|||+|||+|.++..+++.. ..+++.+|+ +.+++.+++ . ++++++.+|.++. .. .||+|++
T Consensus 537 ~~~g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~ 615 (703)
T 3v97_A 537 MSKGKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFI 615 (703)
T ss_dssp HCTTCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEE
T ss_pred hcCCCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEE
Confidence 3456899999999999999988753 346999999 778777664 2 5899999999872 22 5999998
Q ss_pred ccccc--------CCC-hhHHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 183 KLVFH--------GLG-DEDGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 183 ~~vlh--------~~~-d~~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
.-.-. .+. .....++++++.+.|+| ||.+++..
T Consensus 616 DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~Lkp---gG~L~~s~ 657 (703)
T 3v97_A 616 DPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRA---GGTIMFSN 657 (703)
T ss_dssp CCCSBC-------CCBHHHHHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred CCccccCCccchhHHHHHHHHHHHHHHHHHhcCC---CcEEEEEE
Confidence 44211 111 23456889999999999 67766433
No 268
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.34 E-value=5.4e-07 Score=74.86 Aligned_cols=90 Identities=16% Similarity=0.133 Sum_probs=59.7
Q ss_pred HHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEEcCCCC-CCCC-
Q 023384 104 TSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----ADNLKYIAGDMFQ-FIPP- 176 (283)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~rv~~~~~d~~~-~~p~- 176 (283)
...+++ ... .....+|||||||+|.++. +. +.+..+++++|+ +.+++.+++ .++++++.+|+.+ +++.
T Consensus 10 ~~~iv~-~~~--~~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~ 84 (252)
T 1qyr_A 10 IDSIVS-AIN--PQKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGEL 84 (252)
T ss_dssp HHHHHH-HHC--CCTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHH
T ss_pred HHHHHH-hcC--CCCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHh
Confidence 344555 444 5666899999999999999 54 554444999999 888877665 2489999999988 6543
Q ss_pred c-----eEEEecccccCCChhHHHHHH
Q 023384 177 A-----DAFLFKLVFHGLGDEDGLKIL 198 (283)
Q Consensus 177 ~-----D~v~~~~vlh~~~d~~~~~iL 198 (283)
+ +.+++++.-++.+.+-..++|
T Consensus 85 ~~~~~~~~~vvsNlPY~i~~~il~~ll 111 (252)
T 1qyr_A 85 AEKMGQPLRVFGNLPYNISTPLMFHLF 111 (252)
T ss_dssp HHHHTSCEEEEEECCTTTHHHHHHHHH
T ss_pred hcccCCceEEEECCCCCccHHHHHHHH
Confidence 2 344444444444443333333
No 269
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.32 E-value=2.6e-07 Score=77.88 Aligned_cols=69 Identities=19% Similarity=0.290 Sum_probs=54.7
Q ss_pred HHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCC--CeEEEeec-hHHHhcCCC--CCCeEEEEcCCCC-CCCC
Q 023384 105 SFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPG--IKCTVLDL-PHVVANLPE--ADNLKYIAGDMFQ-FIPP 176 (283)
Q Consensus 105 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~--~~~~~~D~-~~~~~~a~~--~~rv~~~~~d~~~-~~p~ 176 (283)
..+++ ..+ .....+|||||||+|.++..++++.+. .+++++|+ +.+++.+++ ..+++++.+|+.+ +++.
T Consensus 32 ~~iv~-~~~--~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~~ 106 (279)
T 3uzu_A 32 DAIVA-AIR--PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFGS 106 (279)
T ss_dssp HHHHH-HHC--CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGGG
T ss_pred HHHHH-hcC--CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChhH
Confidence 44555 554 566789999999999999999998654 55999999 888777654 4689999999998 6654
No 270
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.30 E-value=3.7e-06 Score=62.74 Aligned_cols=76 Identities=16% Similarity=0.085 Sum_probs=56.9
Q ss_pred cCCCCeEEEEcCCcc-HHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCCCC----CceEEEecccccCC
Q 023384 116 FEGLGSLVDVGGGNG-SLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQFIP----PADAFLFKLVFHGL 189 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G-~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~~p----~~D~v~~~~vlh~~ 189 (283)
.....+|||||||+| ..+..|++. .+..+++.|+ |..++ ++..|+|+|.. +||+|...+
T Consensus 33 ~~~~~rVlEVG~G~g~~vA~~La~~-~g~~V~atDInp~Av~---------~v~dDiF~P~~~~Y~~~DLIYsir----- 97 (153)
T 2k4m_A 33 SGPGTRVVEVGAGRFLYVSDYIRKH-SKVDLVLTDIKPSHGG---------IVRDDITSPRMEIYRGAALIYSIR----- 97 (153)
T ss_dssp SCSSSEEEEETCTTCCHHHHHHHHH-SCCEEEEECSSCSSTT---------EECCCSSSCCHHHHTTEEEEEEES-----
T ss_pred CCCCCcEEEEccCCChHHHHHHHHh-CCCeEEEEECCccccc---------eEEccCCCCcccccCCcCEEEEcC-----
Confidence 445579999999999 588888764 4788999998 55444 89999999654 699998766
Q ss_pred ChhHHHHHHHHHHHhhc
Q 023384 190 GDEDGLKILKKRRAAIA 206 (283)
Q Consensus 190 ~d~~~~~iL~~~~~~L~ 206 (283)
++.+...-+.++++...
T Consensus 98 PP~El~~~i~~lA~~v~ 114 (153)
T 2k4m_A 98 PPAEIHSSLMRVADAVG 114 (153)
T ss_dssp CCTTTHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcC
Confidence 45555666666666654
No 271
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.22 E-value=2.6e-06 Score=70.89 Aligned_cols=117 Identities=15% Similarity=0.109 Sum_probs=75.2
Q ss_pred CCCeEEEEcCCccHHHHHHHHH-------CCC-----CeEEEeec-h---HHHhcC-----------C------------
Q 023384 118 GLGSLVDVGGGNGSLSRIISEA-------FPG-----IKCTVLDL-P---HVVANL-----------P------------ 158 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~-------~p~-----~~~~~~D~-~---~~~~~a-----------~------------ 158 (283)
...+|||||+|+|..+..+++. .|+ ++++.++. | +.+..+ +
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 3468999999999999887765 674 58899987 5 222111 0
Q ss_pred ------C--CCCeEEEEcCCCC--C-CC-----CceEEEeccc-ccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 159 ------E--ADNLKYIAGDMFQ--F-IP-----PADAFLFKLV-FHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 159 ------~--~~rv~~~~~d~~~--~-~p-----~~D~v~~~~v-lh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
+ ..+++++.||..+ + .+ .||+|++--. -..-++--...+|+.+++.|+| ||.++...
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~p---GG~l~tys--- 213 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARP---GGTLATFT--- 213 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEE---EEEEEESC---
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCC---CcEEEEEe---
Confidence 1 2456789999866 2 22 4899998421 1000110124789999999999 67655311
Q ss_pred CCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCeeeE
Q 023384 222 NAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKI 269 (283)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 269 (283)
. ...+++.|.++||++.++
T Consensus 214 -a----------------------------a~~vrr~L~~aGF~v~~~ 232 (257)
T 2qy6_A 214 -S----------------------------AGFVRRGLQEAGFTMQKR 232 (257)
T ss_dssp -C----------------------------BHHHHHHHHHHTEEEEEE
T ss_pred -C----------------------------CHHHHHHHHHCCCEEEeC
Confidence 0 124678889999987654
No 272
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.21 E-value=1.7e-06 Score=80.55 Aligned_cols=125 Identities=14% Similarity=0.091 Sum_probs=79.8
Q ss_pred chhhHhhcCccHHHHHHHHhhhhhhhhHHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHC-------------CCC
Q 023384 77 KFWEFMNQNPGINQRFNEAMASDTEILTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAF-------------PGI 143 (283)
Q Consensus 77 ~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-------------p~~ 143 (283)
..|+.+.+++-+...|.+++... +.+ ... .-.+...|||||||+|.++...+++. ...
T Consensus 377 ~tYe~fekD~vRy~~Y~~AI~~a-------l~d-~~~-~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~ 447 (745)
T 3ua3_A 377 GVYNTFEQDQIKYDVYGEAVVGA-------LKD-LGA-DGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKV 447 (745)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHH-------HHH-HHT-TCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEE
T ss_pred HHHHHHcCChhhHHHHHHHHHHH-------HHH-hhc-ccCCCcEEEEECCCCCHHHHHHHHHHHHhCcccccccccccc
Confidence 34666777776666666655432 112 111 01124679999999999975432221 235
Q ss_pred eEEEeec-hHHHhcCCC------CCCeEEEEcCCCC-CC------C-CceEEEecccccCCChhHHHHHHHHHHHhhccC
Q 023384 144 KCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ-FI------P-PADAFLFKLVFHGLGDEDGLKILKKRRAAIASN 208 (283)
Q Consensus 144 ~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~~------p-~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~ 208 (283)
+++++|. |..+...+. .++|+++.+|+.+ .. | ..|+|+.-..=.....+-....|..+.+.|+|
T Consensus 448 kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp- 526 (745)
T 3ua3_A 448 KLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKP- 526 (745)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCT-
T ss_pred EEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCC-
Confidence 8999998 544322221 6889999999998 55 4 59999886653323344456778888899999
Q ss_pred CCCcE
Q 023384 209 GERGK 213 (283)
Q Consensus 209 ~~gg~ 213 (283)
||.
T Consensus 527 --~Gi 529 (745)
T 3ua3_A 527 --TTI 529 (745)
T ss_dssp --TCE
T ss_pred --CcE
Confidence 564
No 273
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.20 E-value=4e-06 Score=69.46 Aligned_cols=102 Identities=11% Similarity=0.090 Sum_probs=65.1
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHh-cCCC----CCCeEEEEcCCCC-CCC--CceEEEeccccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVA-NLPE----ADNLKYIAGDMFQ-FIP--PADAFLFKLVFH 187 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~-~a~~----~~rv~~~~~d~~~-~~p--~~D~v~~~~vlh 187 (283)
+....+|||||||+|.++..+++..+..+++++|+..-+. .... ..++.+...++.. +++ .+|+|++....+
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~apn 151 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIGES 151 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCccC
Confidence 5666799999999999999888876666677777642221 1111 1134444555432 333 499999976554
Q ss_pred ---CCChh-HHHHHHHHHHHhhccCCCC-cEEEEEeeec
Q 023384 188 ---GLGDE-DGLKILKKRRAAIASNGER-GKVIIIDIVI 221 (283)
Q Consensus 188 ---~~~d~-~~~~iL~~~~~~L~p~~~g-g~lli~d~~~ 221 (283)
.+.|. ....+|+.+.+.|+| | |.+++ ..+.
T Consensus 152 sG~~~~D~~rs~~LL~~a~~~Lkp---G~G~FV~-KVf~ 186 (277)
T 3evf_A 152 SSSSVTEGERTVRVLDTVEKWLAC---GVDNFCV-KVLA 186 (277)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHTT---CCSEEEE-EESC
T ss_pred cCchHHHHHHHHHHHHHHHHHhCC---CCCeEEE-EecC
Confidence 12232 334568999999999 6 76555 5554
No 274
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.15 E-value=6.4e-06 Score=78.18 Aligned_cols=101 Identities=13% Similarity=0.083 Sum_probs=71.9
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHH------------------------------------------CCCCeEEEeec-hH
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEA------------------------------------------FPGIKCTVLDL-PH 152 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~------------------------------------------~p~~~~~~~D~-~~ 152 (283)
+.+...|||.+||+|.++++.+.. .+..+++++|+ +.
T Consensus 188 ~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~ 267 (703)
T 3v97_A 188 WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDAR 267 (703)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHH
T ss_pred CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHH
Confidence 556789999999999999987764 23468999999 88
Q ss_pred HHhcCCC-------CCCeEEEEcCCCC-CCC----CceEEEecccccC-C-ChhHHHHHHHHHHHhhc---cCCCCcEEE
Q 023384 153 VVANLPE-------ADNLKYIAGDMFQ-FIP----PADAFLFKLVFHG-L-GDEDGLKILKKRRAAIA---SNGERGKVI 215 (283)
Q Consensus 153 ~~~~a~~-------~~rv~~~~~d~~~-~~p----~~D~v~~~~vlh~-~-~d~~~~~iL~~~~~~L~---p~~~gg~ll 215 (283)
+++.|+. .++++|..+|+.+ ..| .+|+|+++=.... + .+++...+.+.+.+.|+ | ||++.
T Consensus 268 av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~---g~~~~ 344 (703)
T 3v97_A 268 VIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFG---GWNLS 344 (703)
T ss_dssp HHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCT---TCEEE
T ss_pred HHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCC---CCeEE
Confidence 8877664 4569999999987 323 5899999733321 1 23445555655555544 6 78888
Q ss_pred EEee
Q 023384 216 IIDI 219 (283)
Q Consensus 216 i~d~ 219 (283)
|+..
T Consensus 345 ilt~ 348 (703)
T 3v97_A 345 LFSA 348 (703)
T ss_dssp EEES
T ss_pred EEeC
Confidence 8763
No 275
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=98.15 E-value=0.00022 Score=61.36 Aligned_cols=149 Identities=11% Similarity=0.091 Sum_probs=104.5
Q ss_pred CCCeEEEEcCCccHHHHHHHHH-CCCCeEEEeechHHHhcCC-----------------------------CCCCeEEEE
Q 023384 118 GLGSLVDVGGGNGSLSRIISEA-FPGIKCTVLDLPHVVANLP-----------------------------EADNLKYIA 167 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~D~~~~~~~a~-----------------------------~~~rv~~~~ 167 (283)
+...||-+|||.=.....+... .++++++-+|.|++++.-+ ..++..++.
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~ 169 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIG 169 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEc
Confidence 5689999999998888888765 3688999999998865311 146888999
Q ss_pred cCCCC--CC---------C-C-ceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhh
Q 023384 168 GDMFQ--FI---------P-P-ADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETK 234 (283)
Q Consensus 168 ~d~~~--~~---------p-~-~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~ 234 (283)
.|+.+ .+ . + .-++++--+|..++.+++..+|+.+.+...+ |.+++.|.+.++......+....
T Consensus 170 ~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~~----~~~i~yE~i~p~d~fg~~M~~~l 245 (334)
T 3iei_A 170 ADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFER----AMFINYEQVNMGDRFGQIMIENL 245 (334)
T ss_dssp CCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSS----EEEEEEEECCTTSHHHHHHHHHH
T ss_pred cccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCCC----ceEEEEeccCCCCHHHHHHHHHH
Confidence 99976 11 1 1 4578888899999999999999999998875 77888898866542211010000
Q ss_pred hhcccccccccCCccCCHHHHHHHHHHCCCCeeeEEEc
Q 023384 235 FLFDIVMSVNATGKERTESEWAKLFFDACFSHYKITPI 272 (283)
Q Consensus 235 ~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 272 (283)
......+... ....+.++..+.|.++||+.+++..+
T Consensus 246 ~~~g~pl~sl--~~y~t~~~~~~r~~~~Gw~~~~~~d~ 281 (334)
T 3iei_A 246 RRRQCDLAGV--ETCKSLESQKERLLSNGWETASAVDM 281 (334)
T ss_dssp HTTTCCCTTG--GGGGCHHHHHHHHHTTTCSEEEEEEH
T ss_pred HHhCCCCccc--ccCCCHHHHHHHHHHcCCCcceeecH
Confidence 1111111110 12347888899999999998877654
No 276
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.13 E-value=1.3e-06 Score=76.69 Aligned_cols=88 Identities=15% Similarity=0.208 Sum_probs=64.0
Q ss_pred CCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCCC---C--------------
Q 023384 119 LGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQF---I-------------- 174 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~~---~-------------- 174 (283)
..+|||+|||+|.++..+++. ..+++++|+ +++++.+++ .++++|+.+|.++- .
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~ 291 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDL 291 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCG
T ss_pred CCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccc
Confidence 478999999999999988875 358999999 888877654 35899999998761 1
Q ss_pred --CCceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 175 --PPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 175 --p~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
..||+|++.- +.. .+.+++.+.|++ +|+++.+..
T Consensus 292 ~~~~fD~Vv~dP-----Pr~---g~~~~~~~~l~~---~g~ivyvsc 327 (369)
T 3bt7_A 292 KSYQCETIFVDP-----PRS---GLDSETEKMVQA---YPRILYISC 327 (369)
T ss_dssp GGCCEEEEEECC-----CTT---CCCHHHHHHHTT---SSEEEEEES
T ss_pred ccCCCCEEEECc-----Ccc---ccHHHHHHHHhC---CCEEEEEEC
Confidence 1589998732 211 234456666777 688877763
No 277
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.11 E-value=3.8e-06 Score=69.93 Aligned_cols=71 Identities=14% Similarity=0.209 Sum_probs=54.7
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-h-------HHHhcCCC-------CCCeEEEEcCCCC--C-C---
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-P-------HVVANLPE-------ADNLKYIAGDMFQ--F-I--- 174 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~-------~~~~~a~~-------~~rv~~~~~d~~~--~-~--- 174 (283)
.....+|||+|||+|..+..+++. ..+++++|+ + +.++.+++ ..|++++.+|..+ + +
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~ 158 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKT 158 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhcc
Confidence 344579999999999999999986 578999999 7 66666543 3579999999876 2 3
Q ss_pred -CCceEEEecccccC
Q 023384 175 -PPADAFLFKLVFHG 188 (283)
Q Consensus 175 -p~~D~v~~~~vlh~ 188 (283)
..||+|++.-.+++
T Consensus 159 ~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 159 QGKPDIVYLDPMYPE 173 (258)
T ss_dssp HCCCSEEEECCCC--
T ss_pred CCCccEEEECCCCCC
Confidence 35999999765554
No 278
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.06 E-value=1.2e-05 Score=68.74 Aligned_cols=67 Identities=12% Similarity=0.109 Sum_probs=54.1
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC-CC-----CCceEEE
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAF-PGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ-FI-----PPADAFL 181 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~~-----p~~D~v~ 181 (283)
.....+|||+|||+|..+..+++.. +..+++++|+ +..++.+++ ..+++++.+|+.+ +. ..||.|+
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl 179 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYIL 179 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEE
Confidence 5667899999999999999999875 5689999999 777765553 3579999999876 32 2489998
Q ss_pred e
Q 023384 182 F 182 (283)
Q Consensus 182 ~ 182 (283)
+
T Consensus 180 ~ 180 (309)
T 2b9e_A 180 L 180 (309)
T ss_dssp E
T ss_pred E
Confidence 7
No 279
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.03 E-value=2.6e-06 Score=74.87 Aligned_cols=91 Identities=10% Similarity=0.045 Sum_probs=68.6
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----C-----------------CCeEEEEcCCCCC--
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----A-----------------DNLKYIAGDMFQF-- 173 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~-----------------~rv~~~~~d~~~~-- 173 (283)
...+|||+|||+|..++.++++.+..+++++|+ ++.++.+++ . .+++++.+|..+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 457999999999999999999988889999999 777655443 1 2388999998762
Q ss_pred -CC-CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEE
Q 023384 174 -IP-PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 174 -~p-~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
.+ .||+|++.- .. . ...+|..+.+.|+| ||.+++.
T Consensus 127 ~~~~~fD~I~lDP-~~---~--~~~~l~~a~~~lk~---gG~l~vt 163 (378)
T 2dul_A 127 ERHRYFHFIDLDP-FG---S--PMEFLDTALRSAKR---RGILGVT 163 (378)
T ss_dssp HSTTCEEEEEECC-SS---C--CHHHHHHHHHHEEE---EEEEEEE
T ss_pred hccCCCCEEEeCC-CC---C--HHHHHHHHHHhcCC---CCEEEEE
Confidence 23 499999532 11 1 24778999999999 6765554
No 280
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.00 E-value=1.2e-05 Score=74.08 Aligned_cols=99 Identities=11% Similarity=0.078 Sum_probs=71.7
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCC------------------CCeEEEeec-hHHHhcCCC------CC-----CeEEE
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFP------------------GIKCTVLDL-PHVVANLPE------AD-----NLKYI 166 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p------------------~~~~~~~D~-~~~~~~a~~------~~-----rv~~~ 166 (283)
....+|+|.+||+|.++..+++... ..+++++|+ +.++..|+. .. ++.+.
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~ 247 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIR 247 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEE
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeE
Confidence 4457999999999999998876532 247999999 777665542 22 27889
Q ss_pred EcCCCC-C---CCCceEEEecccccCCCh------------hHHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 167 AGDMFQ-F---IPPADAFLFKLVFHGLGD------------EDGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 167 ~~d~~~-~---~p~~D~v~~~~vlh~~~d------------~~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
.+|.+. + .+.||+|++.=.+..... +.-...+.++.+.|+| ||++.++-
T Consensus 248 ~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~---gGr~a~V~ 312 (541)
T 2ar0_A 248 LGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHP---GGRAAVVV 312 (541)
T ss_dssp ESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred eCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCC---CCEEEEEe
Confidence 999987 3 235999999655443211 1224679999999999 79888775
No 281
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.99 E-value=9.9e-06 Score=67.20 Aligned_cols=102 Identities=18% Similarity=0.244 Sum_probs=64.0
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeech-HHHhcCCC----CCC-eEEEEc-CCCC-CCCCceEEEeccccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLP-HVVANLPE----ADN-LKYIAG-DMFQ-FIPPADAFLFKLVFH 187 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~----~~r-v~~~~~-d~~~-~~p~~D~v~~~~vlh 187 (283)
+....+|||||||.|.++...++..+-..++++|+. .....+.. ..+ +.+... |+.. +...+|+|++....+
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDmApn 167 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGDTLLCDIGES 167 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCSEEEECCCCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCcCEEEecCccC
Confidence 667779999999999999998887777778888883 22122211 222 333332 4433 222499999976655
Q ss_pred ----CCChhHHHHHHHHHHHhhccCCCC--cEEEEEeeec
Q 023384 188 ----GLGDEDGLKILKKRRAAIASNGER--GKVIIIDIVI 221 (283)
Q Consensus 188 ----~~~d~~~~~iL~~~~~~L~p~~~g--g~lli~d~~~ 221 (283)
..+......+|+-+.+.|+| | |.+++ -.+.
T Consensus 168 sG~~~~D~~rs~~LL~~A~~~Lk~---g~~G~Fv~-KvF~ 203 (282)
T 3gcz_A 168 SPSIAVEEQRTLRVLNCAKQWLQE---GNYTEFCI-KVLC 203 (282)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHH---HCCCEEEE-EESC
T ss_pred CCChHHHHHHHHHHHHHHHHHcCC---CCCCcEEE-EEec
Confidence 11112334578888899999 5 65544 4443
No 282
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.92 E-value=5.5e-06 Score=73.01 Aligned_cols=93 Identities=10% Similarity=0.020 Sum_probs=69.3
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCC-CeEEEeec-hHHHhcCCC-------CCC-eEEEEcCCCC--C--CC-CceEEE
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPG-IKCTVLDL-PHVVANLPE-------ADN-LKYIAGDMFQ--F--IP-PADAFL 181 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~-------~~r-v~~~~~d~~~--~--~p-~~D~v~ 181 (283)
.+..+|||++||+|.+++.++++.++ .+++.+|+ +..++.+++ .++ ++++.+|.++ . .+ .||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 34579999999999999999998765 57999999 777766654 345 9999999866 2 22 499999
Q ss_pred ecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 182 FKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 182 ~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
+.- . .. ...+++.+.+.|+| ||.+++..
T Consensus 131 lDP-~---g~--~~~~l~~a~~~Lk~---gGll~~t~ 158 (392)
T 3axs_A 131 LDP-F---GT--PVPFIESVALSMKR---GGILSLTA 158 (392)
T ss_dssp ECC-S---SC--CHHHHHHHHHHEEE---EEEEEEEE
T ss_pred ECC-C---cC--HHHHHHHHHHHhCC---CCEEEEEe
Confidence 854 1 11 13578899999999 56554443
No 283
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.84 E-value=0.0001 Score=63.84 Aligned_cols=86 Identities=10% Similarity=0.072 Sum_probs=61.9
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEEEcCCCC-CCC--CceEEEecccccCCChh
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPEADNLKYIAGDMFQ-FIP--PADAFLFKLVFHGLGDE 192 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~rv~~~~~d~~~-~~p--~~D~v~~~~vlh~~~d~ 192 (283)
+..+.++||+||++|.++..++++ +.+++++|..++-......++|+++.+|.++ ..+ .+|++++-.+.+ ..
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~~---p~ 283 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVEK---PA 283 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEECCSSC---HH
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEEEEcCCCC---hH
Confidence 567899999999999999999987 6899999975443333336789999999998 333 499999976653 33
Q ss_pred HHHHHHHHHHHhhc
Q 023384 193 DGLKILKKRRAAIA 206 (283)
Q Consensus 193 ~~~~iL~~~~~~L~ 206 (283)
....++.+......
T Consensus 284 ~~~~l~~~wl~~~~ 297 (375)
T 4auk_A 284 KVAALMAQWLVNGW 297 (375)
T ss_dssp HHHHHHHHHHHTTS
T ss_pred HhHHHHHHHHhccc
Confidence 34444444433333
No 284
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.77 E-value=3.4e-05 Score=67.12 Aligned_cols=95 Identities=17% Similarity=0.161 Sum_probs=68.5
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--------------CCCeEEEEcCCCCCC-------C
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE--------------ADNLKYIAGDMFQFI-------P 175 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--------------~~rv~~~~~d~~~~~-------p 175 (283)
+.++||=||||.|..++++++. |..+++++|+ |.+++.+++ .+|++++.+|..+-+ .
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCeEEEECCCcHHHHHHHHhc-CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 4589999999999999999975 5578999999 888876543 357899999987521 2
Q ss_pred CceEEEecccccCC-C-------hhHHHHHHHHHHHhhccCCCCcEEEE
Q 023384 176 PADAFLFKLVFHGL-G-------DEDGLKILKKRRAAIASNGERGKVII 216 (283)
Q Consensus 176 ~~D~v~~~~vlh~~-~-------d~~~~~iL~~~~~~L~p~~~gg~lli 216 (283)
.||+|+.-..-... + ..-...+++.++++|+| ||.++.
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p---~GVlv~ 329 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQ---DGKYFT 329 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEE---EEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCC---CCEEEE
Confidence 49999985321110 1 11235778999999999 565443
No 285
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.76 E-value=0.00036 Score=59.52 Aligned_cols=143 Identities=15% Similarity=0.125 Sum_probs=95.0
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCC-CCeEEEeechHHHhcCCC---------CCCeEEEEcCCCCCC----------C-
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFP-GIKCTVLDLPHVVANLPE---------ADNLKYIAGDMFQFI----------P- 175 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~---------~~rv~~~~~d~~~~~----------p- 175 (283)
.+...||+||||-=.....+. .| +++++-+|.|.+++..++ .++..++..|+.+.+ +
T Consensus 101 ~g~~QvV~LGaGlDTra~Rl~--~~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 101 DGIRQFVILASGLDSRAYRLD--WPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPS 178 (310)
T ss_dssp TTCCEEEEETCTTCCHHHHSC--CCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTT
T ss_pred hCCCeEEEeCCCCCchhhhcc--CCCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCC
Confidence 345789999999877755543 24 488999999998764432 567889999998621 1
Q ss_pred CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhc-c-ccccc-----c-cCC
Q 023384 176 PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLF-D-IVMSV-----N-ATG 247 (283)
Q Consensus 176 ~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~-~-~~~~~-----~-~~~ 247 (283)
..-++++-.+||.+++++...+|+.+.+.+.| |..++.|.+.++..... ....... . +.-.. . .+-
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~----gs~l~~d~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~l~~~ 252 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSAV----GSRIAVETSPLHGDEWR--EQMQLRFRRVSDALGFEQAVDVQEL 252 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCCT----TCEEEEECCCTTCSHHH--HHHHHHHHHHHC-----------CC
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCCC----CeEEEEEecCCCCcchh--HHHHHHHHHHHHHcCCcCCCCcccc
Confidence 13478888999999999999999999999888 55677777665432110 0000000 0 00000 0 111
Q ss_pred cc-CC-HHHHHHHHHHCCCCee
Q 023384 248 KE-RT-ESEWAKLFFDACFSHY 267 (283)
Q Consensus 248 ~~-~t-~~e~~~ll~~aGf~~~ 267 (283)
.. .+ .++..++|.+.||+.+
T Consensus 253 ~~~~~~~~~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 253 IYHDENRAVVADWLNRHGWRAT 274 (310)
T ss_dssp TTCCTTCCCHHHHHTTTTEEEE
T ss_pred ccCCCChHHHHHHHHHCcCccc
Confidence 22 25 7889999999999987
No 286
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.70 E-value=1.3e-05 Score=85.67 Aligned_cols=141 Identities=16% Similarity=0.163 Sum_probs=66.3
Q ss_pred CCeEEEEcCCccHHHHHHHHHCCC-----CeEEEeec-hHHHhcCCCC---CCeEEEEcCCCCC---CC-CceEEEeccc
Q 023384 119 LGSLVDVGGGNGSLSRIISEAFPG-----IKCTVLDL-PHVVANLPEA---DNLKYIAGDMFQF---IP-PADAFLFKLV 185 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~p~-----~~~~~~D~-~~~~~~a~~~---~rv~~~~~d~~~~---~p-~~D~v~~~~v 185 (283)
..+||+||+|+|..+..+++.... .+++..|+ +...+.+++. -.++....|..++ .+ .||+|+..++
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~v 1320 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNCA 1320 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEECC
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEccc
Confidence 468999999999988777766532 36888898 5556666541 1233222233332 22 4999999999
Q ss_pred ccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCC
Q 023384 186 FHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFS 265 (283)
Q Consensus 186 lh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 265 (283)
||.-++. ...|+++++.|+| ||.+++.+......-.. ...+.+-. ...+....+.++|.++|+++||.
T Consensus 1321 l~~t~~~--~~~l~~~~~lL~p---~G~l~~~e~~~~~~~g~-----~~~~~~~~--~r~~~~~~~~~~w~~~l~~~gf~ 1388 (2512)
T 2vz8_A 1321 LATLGDP--AVAVGNMAATLKE---GGFLLLHTLLAGHPLGE-----MVGFLTSP--EQGGRHLLSQDQWESLFAGASLH 1388 (2512)
T ss_dssp -------------------------CCEEEEEEC---------------------------------CTTTTSSTTTTEE
T ss_pred ccccccH--HHHHHHHHHhcCC---CcEEEEEeccccccccc-----cccccccc--cccCCcccCHHHHHHHHHhCCCc
Confidence 9965543 4779999999999 79988877532100000 00000000 00012234678899999999998
Q ss_pred eeeEEE
Q 023384 266 HYKITP 271 (283)
Q Consensus 266 ~~~~~~ 271 (283)
.+.+..
T Consensus 1389 ~~~~~~ 1394 (2512)
T 2vz8_A 1389 LVALKR 1394 (2512)
T ss_dssp EEEEEE
T ss_pred eeeecc
Confidence 876643
No 287
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.69 E-value=2.8e-05 Score=64.59 Aligned_cols=71 Identities=20% Similarity=0.303 Sum_probs=53.5
Q ss_pred cCCC--CeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHH-------HhcCC----C-C---CCeEEEEcCCCC--C-C
Q 023384 116 FEGL--GSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHV-------VANLP----E-A---DNLKYIAGDMFQ--F-I 174 (283)
Q Consensus 116 ~~~~--~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~-------~~~a~----~-~---~rv~~~~~d~~~--~-~ 174 (283)
..+. .+|||++||+|..+..+++. +.+++++|+ +.+ ++.++ . . .|++++.+|..+ + +
T Consensus 84 l~~g~~~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~ 161 (258)
T 2oyr_A 84 IKGDYLPDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDI 161 (258)
T ss_dssp CBTTBCCCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTC
T ss_pred ccCCCCCEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhC
Confidence 4555 79999999999999999998 568999999 543 33221 1 1 579999999876 2 3
Q ss_pred C-CceEEEecccccC
Q 023384 175 P-PADAFLFKLVFHG 188 (283)
Q Consensus 175 p-~~D~v~~~~vlh~ 188 (283)
+ .||+|++.-.+++
T Consensus 162 ~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 162 TPRPQVVYLDPMFPH 176 (258)
T ss_dssp SSCCSEEEECCCCCC
T ss_pred cccCCEEEEcCCCCC
Confidence 3 4999999766654
No 288
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.69 E-value=0.0002 Score=67.89 Aligned_cols=99 Identities=12% Similarity=0.097 Sum_probs=67.7
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCC---CCeEEEeec-hHHHhcC--CC----------CCCeEEEEcCCCCC----CCCc
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFP---GIKCTVLDL-PHVVANL--PE----------ADNLKYIAGDMFQF----IPPA 177 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p---~~~~~~~D~-~~~~~~a--~~----------~~rv~~~~~d~~~~----~p~~ 177 (283)
...+|+|.|||+|.++.++++..+ ..+++++|+ +.+++.| +. .....+...|++.+ ...|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 467999999999999999999886 357999999 7666555 10 12235566677662 2359
Q ss_pred eEEEecccccC-CChh-H-------------------------HHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 178 DAFLFKLVFHG-LGDE-D-------------------------GLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 178 D~v~~~~vlh~-~~d~-~-------------------------~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
|+|++.=..-. +..+ . ...+++++.+.|+| ||++.++-+
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKp---GGrLAfIlP 466 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQD---GTVISAIMP 466 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCT---TCEEEEEEE
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCC---CcEEEEEEC
Confidence 99999554411 1111 1 23467888999999 788877653
No 289
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.63 E-value=0.00013 Score=60.98 Aligned_cols=97 Identities=14% Similarity=0.180 Sum_probs=62.1
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechH-HHhcCC--C--C-CCeEEEEc-CCCC-CCCCceEEEeccccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPH-VVANLP--E--A-DNLKYIAG-DMFQ-FIPPADAFLFKLVFH 187 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~-~~~~a~--~--~-~rv~~~~~-d~~~-~~p~~D~v~~~~vlh 187 (283)
+....+||||||++|.++..+++..+-..++++|+.. ...... + . +-+.+..+ |++. +-..+|+|++...-+
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~APn 158 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIGES 158 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEEeecCcCC
Confidence 5677899999999999999999876666778888832 111111 0 1 22334433 5444 223599999865544
Q ss_pred CCC----h-hHHHHHHHHHHHhhccCCCC-cEEEE
Q 023384 188 GLG----D-EDGLKILKKRRAAIASNGER-GKVII 216 (283)
Q Consensus 188 ~~~----d-~~~~~iL~~~~~~L~p~~~g-g~lli 216 (283)
-. | .....+|+-+.+.|+| | |.+++
T Consensus 159 -sG~~~~D~~rs~~LL~~A~~~Lkp---G~G~FV~ 189 (300)
T 3eld_A 159 -SSNPLVERDRTMKVLENFERWKHV---NTENFCV 189 (300)
T ss_dssp -CSSHHHHHHHHHHHHHHHHHHCCT---TCCEEEE
T ss_pred -CCCHHHHHHHHHHHHHHHHHHhcC---CCCcEEE
Confidence 11 2 1235668888899999 6 76555
No 290
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.59 E-value=2.9e-05 Score=68.60 Aligned_cols=64 Identities=13% Similarity=0.178 Sum_probs=51.9
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----C----CCeEEEEcCCCCC--C---CCceEEEe
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----A----DNLKYIAGDMFQF--I---PPADAFLF 182 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~----~rv~~~~~d~~~~--~---p~~D~v~~ 182 (283)
....+|||+|||+|..+..+++. ..+++++|+ +.+++.+++ . ++++++.+|+++. . ..||+|++
T Consensus 92 ~~g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 92 REGTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp CTTCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEE
Confidence 33689999999999999998887 469999999 777776653 1 4799999999873 2 25999998
No 291
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.58 E-value=5.4e-05 Score=69.63 Aligned_cols=96 Identities=17% Similarity=0.118 Sum_probs=67.5
Q ss_pred CeEEEEcCCccHHHHHHHHHCC---------------CCeEEEeec-hHHHhcCCC-------CCCeEEEEcCCCC-C-C
Q 023384 120 GSLVDVGGGNGSLSRIISEAFP---------------GIKCTVLDL-PHVVANLPE-------ADNLKYIAGDMFQ-F-I 174 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~p---------------~~~~~~~D~-~~~~~~a~~-------~~rv~~~~~d~~~-~-~ 174 (283)
.+|+|.+||+|.++..+++..+ ..+++++|+ +.++..|+. ..++.+..+|.+. + .
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCccc
Confidence 4999999999999998765432 567999999 777666542 2344458889887 4 2
Q ss_pred C--CceEEEeccccc--CCChh-------------------------HHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 175 P--PADAFLFKLVFH--GLGDE-------------------------DGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 175 p--~~D~v~~~~vlh--~~~d~-------------------------~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
+ .||+|++.=.+. .|..+ .-...++++.+.|+| ||++.++-
T Consensus 326 ~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~---gGr~aiVl 395 (544)
T 3khk_A 326 PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAP---TGSMALLL 395 (544)
T ss_dssp TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEE---EEEEEEEE
T ss_pred ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhcc---CceEEEEe
Confidence 2 499999954333 23211 112578999999999 79887764
No 292
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.51 E-value=0.00013 Score=60.75 Aligned_cols=74 Identities=23% Similarity=0.207 Sum_probs=57.4
Q ss_pred HHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--CCCeEEEEcCCCC-C--C---
Q 023384 104 TSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE--ADNLKYIAGDMFQ-F--I--- 174 (283)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~~rv~~~~~d~~~-~--~--- 174 (283)
.+.+++ .+. ......+||.+||.|..+..++++ +.+++++|. |.+++.+++ .+|+.++.+||.+ + +
T Consensus 11 l~e~le-~L~--~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~~L~~~ 85 (285)
T 1wg8_A 11 YQEALD-LLA--VRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAAL 85 (285)
T ss_dssp HHHHHH-HHT--CCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHT
T ss_pred HHHHHH-hhC--CCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHHHHHHc
Confidence 455666 665 667789999999999999999998 789999999 877755432 2689999998876 2 1
Q ss_pred --CCceEEEe
Q 023384 175 --PPADAFLF 182 (283)
Q Consensus 175 --p~~D~v~~ 182 (283)
..+|.|++
T Consensus 86 g~~~vDgIL~ 95 (285)
T 1wg8_A 86 GVERVDGILA 95 (285)
T ss_dssp TCSCEEEEEE
T ss_pred CCCCcCEEEe
Confidence 24777776
No 293
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.47 E-value=0.00057 Score=54.34 Aligned_cols=93 Identities=14% Similarity=0.167 Sum_probs=61.3
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---------CCCeEEEEcCCCCC-------------
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE---------ADNLKYIAGDMFQF------------- 173 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~rv~~~~~d~~~~------------- 173 (283)
.+..+|||||+| ..++.+++ .++.+++.+|. ++..+.+++ .++|+++.+|..+.
T Consensus 29 ~~a~~VLEiGtG--ySTl~lA~-~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~ 105 (202)
T 3cvo_A 29 EEAEVILEYGSG--GSTVVAAE-LPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWR 105 (202)
T ss_dssp HHCSEEEEESCS--HHHHHHHT-STTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGG
T ss_pred hCCCEEEEECch--HHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhh
Confidence 345899999984 55555555 46789999998 666555442 35799999995431
Q ss_pred -----------C---CCceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCC
Q 023384 174 -----------I---PPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINA 223 (283)
Q Consensus 174 -----------~---p~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~ 223 (283)
. ..||+|++-.-. ....+..+.+.|+| |.++|+|.+...
T Consensus 106 ~l~~~~~~i~~~~~~~~fDlIfIDg~k-------~~~~~~~~l~~l~~----GG~Iv~DNv~~r 158 (202)
T 3cvo_A 106 SYPDYPLAVWRTEGFRHPDVVLVDGRF-------RVGCALATAFSITR----PVTLLFDDYSQR 158 (202)
T ss_dssp GTTHHHHGGGGCTTCCCCSEEEECSSS-------HHHHHHHHHHHCSS----CEEEEETTGGGC
T ss_pred hHHHHhhhhhccccCCCCCEEEEeCCC-------chhHHHHHHHhcCC----CeEEEEeCCcCC
Confidence 1 249999995521 12445557788999 455577765433
No 294
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.41 E-value=0.0004 Score=63.79 Aligned_cols=98 Identities=15% Similarity=0.065 Sum_probs=70.7
Q ss_pred CCCeEEEEcCCccHHHHHHHHHC---CCCeEEEeec-hHHHhcCCC--------CCCeEEEEcCCCC-CCC-----CceE
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAF---PGIKCTVLDL-PHVVANLPE--------ADNLKYIAGDMFQ-FIP-----PADA 179 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~--------~~rv~~~~~d~~~-~~p-----~~D~ 179 (283)
...+|+|.+||+|.++..+++.. +..+++++|+ +.+...++. .+++.+..+|.+. +.| .||+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 45799999999999999998885 3678999999 776665542 2467899999987 322 4999
Q ss_pred EEeccccc-CCChh--------------------HHHHHHHHHHHhhc-cCCCCcEEEEEe
Q 023384 180 FLFKLVFH-GLGDE--------------------DGLKILKKRRAAIA-SNGERGKVIIID 218 (283)
Q Consensus 180 v~~~~vlh-~~~d~--------------------~~~~iL~~~~~~L~-p~~~gg~lli~d 218 (283)
|++.=.+. .|..+ .-...+.++.+.|+ | ||++.++-
T Consensus 301 IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~---gGr~a~Vl 358 (542)
T 3lkd_A 301 VLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQD---NGVMAIVL 358 (542)
T ss_dssp EEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTT---TCEEEEEE
T ss_pred EEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCC---ceeEEEEe
Confidence 99752221 12100 01247899999999 8 79887765
No 295
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.35 E-value=0.00035 Score=57.09 Aligned_cols=104 Identities=17% Similarity=0.162 Sum_probs=59.2
Q ss_pred hcCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHH--HhcCCC-CCCe---EEEEc-CCCCCCC-CceEEEecccc
Q 023384 115 IFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHV--VANLPE-ADNL---KYIAG-DMFQFIP-PADAFLFKLVF 186 (283)
Q Consensus 115 ~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~--~~~a~~-~~rv---~~~~~-d~~~~~p-~~D~v~~~~vl 186 (283)
.++...+|||+||+.|.++...++.-+-..+.+.++... +..... ...+ .|.++ ||++..+ .+|+|++-..=
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df~~~~~~~~DvVLSDMAP 149 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFYKPSEISDTLLCDIGE 149 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCGGGSCCCCCSEEEECCCC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccCCccCCCCCCCCEEEeCCCC
Confidence 377889999999999999998887521112233333111 111111 1345 45557 9998333 59999984321
Q ss_pred c--CC-ChhH-HHHHHHHHHHhhccCCCCc-EEEEEeeecC
Q 023384 187 H--GL-GDED-GLKILKKRRAAIASNGERG-KVIIIDIVIN 222 (283)
Q Consensus 187 h--~~-~d~~-~~~iL~~~~~~L~p~~~gg-~lli~d~~~~ 222 (283)
. ++ .|.. ...+|.-+.+.|+| || .+++ -.+.+
T Consensus 150 nSG~~~vD~~Rs~~aL~~A~~~Lk~---gG~~Fvv-KVFqg 186 (269)
T 2px2_A 150 SSPSAEIEEQRTLRILEMVSDWLSR---GPKEFCI-KILCP 186 (269)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHTT---CCSEEEE-EESCT
T ss_pred CCCccHHHHHHHHHHHHHHHHHhhc---CCcEEEE-EECCC
Confidence 1 11 1211 22357667789999 56 5444 44443
No 296
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.27 E-value=0.00081 Score=54.19 Aligned_cols=104 Identities=15% Similarity=0.142 Sum_probs=66.9
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCC--C---CCCeEEEEc-CCCC-CCCCceEEEeccccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLP--E---ADNLKYIAG-DMFQ-FIPPADAFLFKLVFH 187 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~--~---~~rv~~~~~-d~~~-~~p~~D~v~~~~vlh 187 (283)
+....+||||||++|.++...+....-.+++++|+ +.-.+.-. + -..|+|..+ |++. +...+|.+++--.=-
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~~~~DtllcDIgeS 155 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPPEKCDTLLCDIGES 155 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCCCCCSEEEECCCCC
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecCCccccEEEEecCCC
Confidence 66677999999999999998887766668999998 32222111 1 467899999 9776 333499998833211
Q ss_pred CCC---hh-HHHHHHHHHHHhhccCCCCcEEEEEeeecCCC
Q 023384 188 GLG---DE-DGLKILKKRRAAIASNGERGKVIIIDIVINAE 224 (283)
Q Consensus 188 ~~~---d~-~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~ 224 (283)
.=+ |+ ...++|+-+.+.|++ |.+++ -.+.|..
T Consensus 156 s~~~~vE~~RtlrvLela~~wL~~----~~fc~-KVl~py~ 191 (267)
T 3p8z_A 156 SPSPTVEESRTIRVLKMVEPWLKN----NQFCI-KVLNPYM 191 (267)
T ss_dssp CSCHHHHHHHHHHHHHHHGGGCSS----CEEEE-EESCCCS
T ss_pred CCChhhhhhHHHHHHHHHHHhccc----CCEEE-EEccCCC
Confidence 111 11 224466666788887 44444 4444443
No 297
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.19 E-value=0.0018 Score=54.28 Aligned_cols=96 Identities=16% Similarity=0.181 Sum_probs=67.8
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHC-----CCCeEEEeec-hH--------------------------HHhcCCC-----
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAF-----PGIKCTVLDL-PH--------------------------VVANLPE----- 159 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~-----p~~~~~~~D~-~~--------------------------~~~~a~~----- 159 (283)
....+||++|+..|..++.+++.. |+.+++++|. .. .++.+++
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 345799999999999999887765 5788999994 11 0111111
Q ss_pred ---CCCeEEEEcCCCC--C-CC--CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 160 ---ADNLKYIAGDMFQ--F-IP--PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 160 ---~~rv~~~~~d~~~--~-~p--~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
.++|+++.||+.+ + .+ .+|++++-.- + -+.....|+.+.+.|+| |.++|+|..
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD---~-y~~~~~~Le~~~p~L~p----GGiIv~DD~ 245 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD---L-YESTWDTLTNLYPKVSV----GGYVIVDDY 245 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCC---S-HHHHHHHHHHHGGGEEE----EEEEEESSC
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC---c-cccHHHHHHHHHhhcCC----CEEEEEcCC
Confidence 3789999999977 2 32 4899888542 1 13346789999999999 667777754
No 298
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.05 E-value=0.016 Score=54.93 Aligned_cols=148 Identities=14% Similarity=0.136 Sum_probs=101.3
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCC--------CCeEEEeechHHHhcCCC------------------------------
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFP--------GIKCTVLDLPHVVANLPE------------------------------ 159 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p--------~~~~~~~D~~~~~~~a~~------------------------------ 159 (283)
+...||-+|||.=.....+...+| +++++-+|.|++++.-++
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFLT 186 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCEE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHHHHHHHHcChHHHHhhcccccccccccccccccc
Confidence 457899999999999998887755 778899999988643211
Q ss_pred CCCeEEEEcCCCCC--C-----------CC-ceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCc
Q 023384 160 ADNLKYIAGDMFQF--I-----------PP-ADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEE 225 (283)
Q Consensus 160 ~~rv~~~~~d~~~~--~-----------p~-~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~ 225 (283)
.++..++..|+.+. + ++ .-++++--+|..++.+++.++|+.+.+ + | ++.+++.|.+.+...
T Consensus 187 s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~-~-~---~~~~~~~e~~~~~~~ 261 (695)
T 2zwa_A 187 TPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSK-M-E---NSHFIILEQLIPKGP 261 (695)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHT-S-S---SEEEEEEEECCTTCT
T ss_pred CCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhh-C-C---CceEEEEEeecCCCC
Confidence 14889999999872 1 22 346777889999999999999999885 4 5 488888898877532
Q ss_pred cchhhhhhhhhcccccccc---cCCccCCHHHHHHHHHHCCCCeeeEEEc
Q 023384 226 EEHELTETKFLFDIVMSVN---ATGKERTESEWAKLFFDACFSHYKITPI 272 (283)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~---~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 272 (283)
..+ +... ....+..... .-....+.++..+.|.+.||+.+.....
T Consensus 262 ~d~-f~~~-m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~~~ 309 (695)
T 2zwa_A 262 FEP-FSKQ-MLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVGDM 309 (695)
T ss_dssp TSH-HHHH-HHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEEEH
T ss_pred CCh-HHHH-HHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCcceeeH
Confidence 221 1110 0001110000 0113447999999999999987766543
No 299
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.93 E-value=0.0049 Score=51.36 Aligned_cols=103 Identities=14% Similarity=0.203 Sum_probs=65.2
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhc---CCC--CCCeEEEEc-CCCC-CCCCceEEEeccccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVAN---LPE--ADNLKYIAG-DMFQ-FIPPADAFLFKLVFH 187 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~---a~~--~~rv~~~~~-d~~~-~~p~~D~v~~~~vlh 187 (283)
+....+||||||++|.++...+....-.+++++|+ ..--+. .++ -.-|.+..+ |++. +...+|++++--. -
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~~~~D~ivcDig-e 170 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPSECCDTLLCDIG-E 170 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCCCCCSEEEECCC-C
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCCCCCCEEEEECc-c
Confidence 56667999999999999997777765557999998 331111 111 134888888 8776 3345899887443 2
Q ss_pred CCCh----h-HHHHHHHHHHHhhccCCCCcEEEEEeeecC
Q 023384 188 GLGD----E-DGLKILKKRRAAIASNGERGKVIIIDIVIN 222 (283)
Q Consensus 188 ~~~d----~-~~~~iL~~~~~~L~p~~~gg~lli~d~~~~ 222 (283)
--+. + ...++|.-+.+.|++ +| |-++| -.+.|
T Consensus 171 Ss~~~~ve~~Rtl~vLel~~~wL~~-~~-~~f~~-KVl~p 207 (321)
T 3lkz_A 171 SSSSAEVEEHRTIRVLEMVEDWLHR-GP-REFCV-KVLCP 207 (321)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHTT-CC-CEEEE-EESCT
T ss_pred CCCChhhhhhHHHHHHHHHHHHhcc-CC-CcEEE-EEcCC
Confidence 1121 1 224467777888988 22 55444 44444
No 300
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.79 E-value=0.0087 Score=50.54 Aligned_cols=120 Identities=20% Similarity=0.189 Sum_probs=71.1
Q ss_pred CCCeEEEEcCCccHHHHHH----HHHCCCCe--EEEeec-h--------HHH--------hcCCC--CCCe--EEEEcCC
Q 023384 118 GLGSLVDVGGGNGSLSRII----SEAFPGIK--CTVLDL-P--------HVV--------ANLPE--ADNL--KYIAGDM 170 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l----~~~~p~~~--~~~~D~-~--------~~~--------~~a~~--~~rv--~~~~~d~ 170 (283)
..-+|+|+|=|+|...... .+..|+.+ ++.++. | +.. ..... ..++ .+.-||.
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 3468999999999876543 34577765 455553 1 000 00000 3444 4677887
Q ss_pred CCC---CC--CceEEEecccccCCChh-HHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccc
Q 023384 171 FQF---IP--PADAFLFKLVFHGLGDE-DGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVN 244 (283)
Q Consensus 171 ~~~---~p--~~D~v~~~~vlh~~~d~-~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (283)
.+. ++ .+|++++-..=-.-.++ -...+++++++.++| ||.+.-..
T Consensus 176 ~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~p---gg~laTYt-------------------------- 226 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDE---KGYWVSYS-------------------------- 226 (308)
T ss_dssp HHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEE---EEEEEESC--------------------------
T ss_pred HHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCC---CcEEEEEe--------------------------
Confidence 662 33 38998884321111111 124789999999999 56543110
Q ss_pred cCCccCCHHHHHHHHHHCCCCeeeEEEc
Q 023384 245 ATGKERTESEWAKLFFDACFSHYKITPI 272 (283)
Q Consensus 245 ~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 272 (283)
....+++-|++|||++.++...
T Consensus 227 ------aag~VRR~L~~aGF~V~k~~G~ 248 (308)
T 3vyw_A 227 ------SSLSVRKSLLTLGFKVGSSREI 248 (308)
T ss_dssp ------CCHHHHHHHHHTTCEEEEEECC
T ss_pred ------CcHHHHHHHHHCCCEEEecCCC
Confidence 1346788999999997766443
No 301
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=96.70 E-value=0.0035 Score=53.50 Aligned_cols=66 Identities=20% Similarity=0.207 Sum_probs=53.3
Q ss_pred HHHHHHHhhhhhcCCCCeEEEEcCCccHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC--CCCeEEEEcCCCC
Q 023384 104 TSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAF-PGIKCTVLDL-PHVVANLPE--ADNLKYIAGDMFQ 172 (283)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~--~~rv~~~~~d~~~ 172 (283)
.+.+++ .+. ......+||..+|.|..+.+++++. |+.+++++|. |.+++.++. .+|++++.++|.+
T Consensus 46 l~Evl~-~L~--i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~ 115 (347)
T 3tka_A 46 LDEAVN-GLN--IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSA 115 (347)
T ss_dssp THHHHH-HTC--CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGG
T ss_pred HHHHHH-hhC--CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHH
Confidence 456666 555 5667899999999999999999985 8899999999 888887643 5678888877665
No 302
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.33 E-value=0.017 Score=48.18 Aligned_cols=91 Identities=12% Similarity=0.109 Sum_probs=59.3
Q ss_pred cCCCCeEEEEcC------CccHHHHHHHHHCCC-CeEEEeechHHHhcCCCCCCeEEEEcCCCC-CC-CCceEEEeccc-
Q 023384 116 FEGLGSLVDVGG------GNGSLSRIISEAFPG-IKCTVLDLPHVVANLPEADNLKYIAGDMFQ-FI-PPADAFLFKLV- 185 (283)
Q Consensus 116 ~~~~~~vlDvGg------G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~rv~~~~~d~~~-~~-p~~D~v~~~~v- 185 (283)
.+...+|||+|+ ..|.+ .+.+..|. ..++..|+.+....+ . .++.||+.+ .. ..+|+|++-..
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~sda----~-~~IqGD~~~~~~~~k~DLVISDMAP 179 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVSDA----D-STLIGDCATVHTANKWDLIISDMYD 179 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBCSS----S-EEEESCGGGEEESSCEEEEEECCCC
T ss_pred ecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccccCC----C-eEEEccccccccCCCCCEEEecCCC
Confidence 456689999996 66773 44556786 689999995544322 1 459999876 33 35999987221
Q ss_pred ------ccCC--ChhHHHHHHHHHHHhhccCCCCcEEEE
Q 023384 186 ------FHGL--GDEDGLKILKKRRAAIASNGERGKVII 216 (283)
Q Consensus 186 ------lh~~--~d~~~~~iL~~~~~~L~p~~~gg~lli 216 (283)
-++- ...-+..+|.=+.+.|+| ||.+++
T Consensus 180 NtTG~~D~d~~Rs~~L~ElALdfA~~~Lkp---GGsFvV 215 (344)
T 3r24_A 180 PRTKHVTKENDSKEGFFTYLCGFIKQKLAL---GGSIAV 215 (344)
T ss_dssp TTSCSSCSCCCCCCTHHHHHHHHHHHHEEE---EEEEEE
T ss_pred CcCCccccchhHHHHHHHHHHHHHHHhCcC---CCEEEE
Confidence 1111 122356667778889999 676655
No 303
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.30 E-value=0.014 Score=50.61 Aligned_cols=105 Identities=14% Similarity=0.159 Sum_probs=73.0
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCC------------CCCCeEEEEcCCCC-C--CC-Cce
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLP------------EADNLKYIAGDMFQ-F--IP-PAD 178 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~------------~~~rv~~~~~d~~~-~--~p-~~D 178 (283)
...+.+|||+-+|.|.=+..+++..++..++..|+ +.-+...+ ...++.+...|... + .+ .||
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD 225 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYD 225 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCC
Confidence 56678999999999999999999887778899998 54433221 13578888888776 2 23 499
Q ss_pred EEEecc--------c-------ccCCChhHH-------HHHHHHHHHhhccCCCCcEEEEEeeecCC
Q 023384 179 AFLFKL--------V-------FHGLGDEDG-------LKILKKRRAAIASNGERGKVIIIDIVINA 223 (283)
Q Consensus 179 ~v~~~~--------v-------lh~~~d~~~-------~~iL~~~~~~L~p~~~gg~lli~d~~~~~ 223 (283)
.|++-- + ...|..++. .+||+++.+.||| ||+|+-....+..
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkp---GG~LVYsTCSl~~ 289 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKP---GGHVVYSTCSLSH 289 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEE---EEEEEEEESCCCT
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCC---CcEEEEEeCCCch
Confidence 998721 1 122222221 4789999999999 7877666554443
No 304
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.13 E-value=0.008 Score=51.96 Aligned_cols=54 Identities=19% Similarity=0.223 Sum_probs=41.8
Q ss_pred CCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCC---CCCCeEEEEcCCCC
Q 023384 119 LGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLP---EADNLKYIAGDMFQ 172 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~---~~~rv~~~~~d~~~ 172 (283)
...|||||.|.|.++..|+++...-+++++++ +..+...+ ..++++++.+|+++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~ 116 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYD 116 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTC
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCccc
Confidence 47899999999999999998754457888887 44433222 25789999999976
No 305
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=95.83 E-value=0.041 Score=50.36 Aligned_cols=100 Identities=12% Similarity=0.050 Sum_probs=64.9
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHC-------------CCCeEEEeec-hHHHhcCCC------CCCeEEEEcCCCC-CC-
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAF-------------PGIKCTVLDL-PHVVANLPE------ADNLKYIAGDMFQ-FI- 174 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~-------------p~~~~~~~D~-~~~~~~a~~------~~rv~~~~~d~~~-~~- 174 (283)
....+|+|-.||+|.++....+.. ....+.++|+ +.+...++- .+.-.+..+|.+. +.
T Consensus 216 ~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~ 295 (530)
T 3ufb_A 216 QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLR 295 (530)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGG
T ss_pred CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchh
Confidence 445689999999999998766532 1356899998 666554442 2344667888776 32
Q ss_pred -----CCceEEEecccccC-CC-------------hhHHHHHHHHHHHhhc-------cCCCCcEEEEEee
Q 023384 175 -----PPADAFLFKLVFHG-LG-------------DEDGLKILKKRRAAIA-------SNGERGKVIIIDI 219 (283)
Q Consensus 175 -----p~~D~v~~~~vlh~-~~-------------d~~~~~iL~~~~~~L~-------p~~~gg~lli~d~ 219 (283)
..||+|+..=.+-. +. .+.....+..+.+.|+ | ||++.++-+
T Consensus 296 ~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~---gGr~avVlP 363 (530)
T 3ufb_A 296 EMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDN---GGRAAVVVP 363 (530)
T ss_dssp GCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSS---CCEEEEEEE
T ss_pred hhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCC---CceEEEEec
Confidence 14999998655421 11 1122345777888886 5 788877653
No 306
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.67 E-value=0.026 Score=47.53 Aligned_cols=41 Identities=17% Similarity=0.101 Sum_probs=33.8
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE 159 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~ 159 (283)
.....|||++||+|..+.+.++. +.+++++|+ +..++.+++
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a~~ 275 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLAKE 275 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHH
Confidence 45679999999999999998876 568999999 777766653
No 307
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=93.53 E-value=0.21 Score=40.96 Aligned_cols=94 Identities=19% Similarity=0.259 Sum_probs=64.4
Q ss_pred CCeEEEEcCCccHHHHHHHHH-------CCCCeEEEeec----hHH------------------------Hh-------c
Q 023384 119 LGSLVDVGGGNGSLSRIISEA-------FPGIKCTVLDL----PHV------------------------VA-------N 156 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~-------~p~~~~~~~D~----~~~------------------------~~-------~ 156 (283)
...|+|+|+-.|..+..++.. .++-++.++|. |+. ++ .
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 479999999999988886642 46778999993 221 00 0
Q ss_pred CCC----CCCeEEEEcCCCCCC-------C--CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 157 LPE----ADNLKYIAGDMFQFI-------P--PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 157 a~~----~~rv~~~~~d~~~~~-------p--~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
.+. .++|+++.|++.+.+ | .+|++++-. ++ -+.....|+.+...|+| |.++++|..
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~---D~-Y~~t~~~le~~~p~l~~----GGvIv~DD~ 218 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDL---DL-YEPTKAVLEAIRPYLTK----GSIVAFDEL 218 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECC---CC-HHHHHHHHHHHGGGEEE----EEEEEESST
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcC---cc-cchHHHHHHHHHHHhCC----CcEEEEcCC
Confidence 011 378999999997721 3 378888754 22 13356779999999999 666676643
No 308
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=93.06 E-value=0.58 Score=40.70 Aligned_cols=96 Identities=16% Similarity=0.198 Sum_probs=63.7
Q ss_pred CeEEEEcCCccHHHHHHHHHCCCCeE-EEeec-hHHHhcCCC-CCCeEEEEcCCCC-C---C-------CCceEEEeccc
Q 023384 120 GSLVDVGGGNGSLSRIISEAFPGIKC-TVLDL-PHVVANLPE-ADNLKYIAGDMFQ-F---I-------PPADAFLFKLV 185 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~p~~~~-~~~D~-~~~~~~a~~-~~rv~~~~~d~~~-~---~-------p~~D~v~~~~v 185 (283)
.+++|+=||.|.++..+.++ +.++ ..+|+ +..++..+. -....++.+|+.+ . + +.+|+++..--
T Consensus 3 ~~vidLFsG~GGlslG~~~a--G~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpP 80 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA--GFDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPP 80 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH--TCEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCC
T ss_pred CeEEEEccCcCHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCC
Confidence 58999999999999999988 4554 58888 555544332 3456778888876 2 2 35899998776
Q ss_pred ccCCC-------hhHHHHHHH---HHHHhhccCCCCcEEEEEeeecC
Q 023384 186 FHGLG-------DEDGLKILK---KRRAAIASNGERGKVIIIDIVIN 222 (283)
Q Consensus 186 lh~~~-------d~~~~~iL~---~~~~~L~p~~~gg~lli~d~~~~ 222 (283)
...|+ ++..-.++. ++.+.++| +++++|.+..
T Consensus 81 CQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P-----~~~v~ENV~g 122 (376)
T 3g7u_A 81 CQGFSSIGKGNPDDSRNQLYMHFYRLVSELQP-----LFFLAENVPG 122 (376)
T ss_dssp CCTTC-------CHHHHHHHHHHHHHHHHHCC-----SEEEEEECTT
T ss_pred CCCcccccCCCCCCchHHHHHHHHHHHHHhCC-----CEEEEecchH
Confidence 66665 111223333 44455676 6788887653
No 309
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=92.73 E-value=0.39 Score=41.20 Aligned_cols=124 Identities=10% Similarity=0.061 Sum_probs=72.7
Q ss_pred CeEEEEcCCccHHHHHHHHHCCCC-eEEEeec-hHHHhcCCC-CCCeEEEEcCCCC-C---CC--CceEEEecccccCCC
Q 023384 120 GSLVDVGGGNGSLSRIISEAFPGI-KCTVLDL-PHVVANLPE-ADNLKYIAGDMFQ-F---IP--PADAFLFKLVFHGLG 190 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~-~---~p--~~D~v~~~~vlh~~~ 190 (283)
.+|+|+-||.|.++..+.++.-.. .+..+|+ +..++..+. .....++.+|+.+ . ++ .+|+++..--...|+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~fS 82 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFT 82 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC-----
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcchh
Confidence 579999999999999999884323 3678888 665554443 3344577888876 2 23 589999976655554
Q ss_pred hh--------HHHHHHHHHHHhhccCCCC--cEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHH
Q 023384 191 DE--------DGLKILKKRRAAIASNGER--GKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFF 260 (283)
Q Consensus 191 d~--------~~~~iL~~~~~~L~p~~~g--g~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~ 260 (283)
.. ..-.++..+.+.++.. . -+++++|.+..=. .+ .+.+.+.+.|+
T Consensus 83 ~ag~~~g~~d~r~~l~~~~~~~i~~~--~~~P~~~~~ENV~~l~---------------------~~--~~~~~i~~~l~ 137 (343)
T 1g55_A 83 RIGRQGDMTDSRTNSFLHILDILPRL--QKLPKYILLENVKGFE---------------------VS--STRDLLIQTIE 137 (343)
T ss_dssp -------------CHHHHHHHHGGGC--SSCCSEEEEEEETTGG---------------------GS--HHHHHHHHHHH
T ss_pred hcCCcCCccCccchHHHHHHHHHHHh--cCCCCEEEEeCCcccc---------------------CH--HHHHHHHHHHH
Confidence 21 1112444444443320 1 2567777655210 00 13567888889
Q ss_pred HCCCCeee
Q 023384 261 DACFSHYK 268 (283)
Q Consensus 261 ~aGf~~~~ 268 (283)
+.|+.+..
T Consensus 138 ~~GY~v~~ 145 (343)
T 1g55_A 138 NCGFQYQE 145 (343)
T ss_dssp HTTEEEEE
T ss_pred HCCCeeEE
Confidence 99987653
No 310
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=91.95 E-value=0.97 Score=38.45 Aligned_cols=121 Identities=14% Similarity=0.095 Sum_probs=74.0
Q ss_pred CCeEEEEcCCccHHHHHHHHHCCCCe-EEEeec-hHHHhcCCC-CCCeEEEEcCCCC----CCCCceEEEecccccCCC-
Q 023384 119 LGSLVDVGGGNGSLSRIISEAFPGIK-CTVLDL-PHVVANLPE-ADNLKYIAGDMFQ----FIPPADAFLFKLVFHGLG- 190 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~p~~~-~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~----~~p~~D~v~~~~vlh~~~- 190 (283)
..+++|+-||.|.++..+.++ +.+ +..+|+ +..++..+. ..... .+|+.+ .++.+|+++..--...|+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a--G~~~v~~~e~d~~a~~t~~~N~~~~~--~~Di~~~~~~~~~~~D~l~~gpPCQ~fS~ 86 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC--GAECVYSNEWDKYAQEVYEMNFGEKP--EGDITQVNEKTIPDHDILCAGFPCQAFSI 86 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT--TCEEEEEECCCHHHHHHHHHHHSCCC--BSCGGGSCGGGSCCCSEEEEECCCTTTCT
T ss_pred CCcEEEECCCcCHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCCCC--cCCHHHcCHhhCCCCCEEEECCCCCCcch
Confidence 368999999999999999887 455 456788 555443332 01111 567765 245689999876655554
Q ss_pred --------hhH--HHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHH
Q 023384 191 --------DED--GLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFF 260 (283)
Q Consensus 191 --------d~~--~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~ 260 (283)
|+. ...-+-++.+.++| +++++|.+..-... .+..+.+.+.+.|+
T Consensus 87 ag~~~g~~d~r~~L~~~~~r~i~~~~P-----~~~~~ENV~gl~~~--------------------~~~~~~~~i~~~l~ 141 (327)
T 2c7p_A 87 SGKQKGFEDSRGTLFFDIARIVREKKP-----KVVFMENVKNFASH--------------------DNGNTLEVVKNTMN 141 (327)
T ss_dssp TSCCCGGGSTTSCHHHHHHHHHHHHCC-----SEEEEEEEGGGGTG--------------------GGGHHHHHHHHHHH
T ss_pred hcccCCCcchhhHHHHHHHHHHHhccC-----cEEEEeCcHHHHhc--------------------cccHHHHHHHHHHH
Confidence 211 12223334455677 67888876531100 11124577888899
Q ss_pred HCCCCeee
Q 023384 261 DACFSHYK 268 (283)
Q Consensus 261 ~aGf~~~~ 268 (283)
+.|+.+..
T Consensus 142 ~~GY~v~~ 149 (327)
T 2c7p_A 142 ELDYSFHA 149 (327)
T ss_dssp HTTBCCEE
T ss_pred hCCCEEEE
Confidence 99987653
No 311
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=91.74 E-value=0.48 Score=39.33 Aligned_cols=101 Identities=14% Similarity=0.065 Sum_probs=71.3
Q ss_pred CCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEEcCCCC--C--CC---CceEEEecccc
Q 023384 119 LGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE----ADNLKYIAGDMFQ--F--IP---PADAFLFKLVF 186 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~rv~~~~~d~~~--~--~p---~~D~v~~~~vl 186 (283)
...+||+=+|||.++++.++ +.-+++.+|+ +..++..++ .++++++..|.++ . .| .+|+|++-=..
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS--~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPY 169 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLR--SQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSY 169 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSC--TTSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCC
T ss_pred CCCceeEeCCcHHHHHHHcC--CCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCC
Confidence 46789999999999999988 4578999999 776655444 5789999999765 1 12 49999995444
Q ss_pred cCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCC
Q 023384 187 HGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAE 224 (283)
Q Consensus 187 h~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~ 224 (283)
.. .++..++++.+.+..+- .++|.++|.=++....
T Consensus 170 e~--k~~~~~vl~~L~~~~~r-~~~Gi~v~WYPi~~~~ 204 (283)
T 2oo3_A 170 ER--KEEYKEIPYAIKNAYSK-FSTGLYCVWYPVVNKA 204 (283)
T ss_dssp CS--TTHHHHHHHHHHHHHHH-CTTSEEEEEEEESSHH
T ss_pred CC--CcHHHHHHHHHHHhCcc-CCCeEEEEEEeccchH
Confidence 32 22455667766665432 1268888887776543
No 312
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=90.35 E-value=0.53 Score=41.06 Aligned_cols=37 Identities=16% Similarity=0.362 Sum_probs=28.7
Q ss_pred CCCeEEEEcCCccHHHHHHHHHC-------CCCeEEEeechHHH
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAF-------PGIKCTVLDLPHVV 154 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~-------p~~~~~~~D~~~~~ 154 (283)
..-.|+|+|+|+|.++..+++.. ..++++.++.++.+
T Consensus 80 ~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~L 123 (387)
T 1zkd_A 80 QTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVL 123 (387)
T ss_dssp SSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHH
T ss_pred CCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHH
Confidence 34579999999999999888653 34689999985443
No 313
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.99 E-value=0.95 Score=38.23 Aligned_cols=83 Identities=14% Similarity=0.060 Sum_probs=52.0
Q ss_pred CeEEEEcCCc--cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCC-CCCCceEEEecccccCCChhHHH
Q 023384 120 GSLVDVGGGN--GSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQ-FIPPADAFLFKLVFHGLGDEDGL 195 (283)
Q Consensus 120 ~~vlDvGgG~--G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~-~~p~~D~v~~~~vlh~~~d~~~~ 195 (283)
.+|.=||+|. +.++..+++.....+++++|. ++.++.+.+..-+.-...|..+ ....+|+|+++- +.....
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilav-----p~~~~~ 108 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSS-----PVRTFR 108 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECS-----CGGGHH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeC-----CHHHHH
Confidence 6899998763 334444555433338999998 6666655432222122334433 344689999854 455667
Q ss_pred HHHHHHHHhhcc
Q 023384 196 KILKKRRAAIAS 207 (283)
Q Consensus 196 ~iL~~~~~~L~p 207 (283)
.+++++.+.++|
T Consensus 109 ~vl~~l~~~l~~ 120 (314)
T 3ggo_A 109 EIAKKLSYILSE 120 (314)
T ss_dssp HHHHHHHHHSCT
T ss_pred HHHHHHhhccCC
Confidence 889999999998
No 314
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=89.98 E-value=0.91 Score=42.65 Aligned_cols=93 Identities=16% Similarity=0.145 Sum_probs=54.8
Q ss_pred CCeEEEEcCCccHHHHHHHHHC-------CC-----CeEEEeec----hHHHhc-CC-----------------C-----
Q 023384 119 LGSLVDVGGGNGSLSRIISEAF-------PG-----IKCTVLDL----PHVVAN-LP-----------------E----- 159 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~-------p~-----~~~~~~D~----~~~~~~-a~-----------------~----- 159 (283)
.-+|+|+|-|+|......++.+ |+ ++++.++. ++.+.. .. .
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 3589999999999888876653 32 55788875 223321 00 0
Q ss_pred ------C--CCeEEEEcCCCC--C-C-----CCceEEEecccccCCChh-HHHHHHHHHHHhhccCCCCcEE
Q 023384 160 ------A--DNLKYIAGDMFQ--F-I-----PPADAFLFKLVFHGLGDE-DGLKILKKRRAAIASNGERGKV 214 (283)
Q Consensus 160 ------~--~rv~~~~~d~~~--~-~-----p~~D~v~~~~vlh~~~d~-~~~~iL~~~~~~L~p~~~gg~l 214 (283)
. -++++.-||..+ + + ..+|++++--.--.-+++ -...+++.+++.++| ||.+
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~---g~~~ 215 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARP---GGTL 215 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEE---EEEE
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCC---CCEE
Confidence 1 223456677655 1 2 238998874321111111 134789999999999 5654
No 315
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=89.36 E-value=1.9 Score=33.51 Aligned_cols=95 Identities=11% Similarity=0.161 Sum_probs=59.8
Q ss_pred eEEEEcCCccHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCC----CCCceEEEecccccCCChhH
Q 023384 121 SLVDVGGGNGSLSRIISEAF--PGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQF----IPPADAFLFKLVFHGLGDED 193 (283)
Q Consensus 121 ~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~----~p~~D~v~~~~vlh~~~d~~ 193 (283)
+||=.| |+|..+..+++.+ .+.++++++. ++...... .+++++.+|+.++ +.+.|+++.......-..+.
T Consensus 2 kvlVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~ 78 (221)
T 3ew7_A 2 KIGIIG-ATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEK 78 (221)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTTS
T ss_pred eEEEEc-CCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccChhhhhhcCCCEEEECCcCCccccch
Confidence 456554 5666666655543 3578888888 55444332 6789999999873 23578888765443222333
Q ss_pred HHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 194 GLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 194 ~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
.....+++.++++..+ .++++++..
T Consensus 79 ~~~~~~~l~~a~~~~~-~~~~v~~SS 103 (221)
T 3ew7_A 79 HVTSLDHLISVLNGTV-SPRLLVVGG 103 (221)
T ss_dssp HHHHHHHHHHHHCSCC-SSEEEEECC
T ss_pred HHHHHHHHHHHHHhcC-CceEEEEec
Confidence 4566778888887622 467777654
No 316
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=88.99 E-value=0.63 Score=43.86 Aligned_cols=118 Identities=14% Similarity=0.135 Sum_probs=70.8
Q ss_pred CCCeEEEEcCCccHHHHHHHHHC-------CC-----CeEEEeec-h---HHHhcCC---------------C-------
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAF-------PG-----IKCTVLDL-P---HVVANLP---------------E------- 159 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~-------p~-----~~~~~~D~-~---~~~~~a~---------------~------- 159 (283)
..-+|+|+|-|+|.......+.+ |+ ++++.++. | +.+..+- .
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 34689999999999988877653 32 56788875 3 2222100 0
Q ss_pred -------CC--CeEEEEcCCCC--C-C-----CCceEEEecccccCC-ChhHHHHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 160 -------AD--NLKYIAGDMFQ--F-I-----PPADAFLFKLVFHGL-GDEDGLKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 160 -------~~--rv~~~~~d~~~--~-~-----p~~D~v~~~~vlh~~-~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
.. ++++.-||..+ + + ..+|++++--.--.- ++--...+++.+.+.++| |+.+.-..
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~---g~~~~t~~--- 211 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRP---GGTFSTFT--- 211 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEE---EEEEEESC---
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCC---CCEEEecc---
Confidence 12 44567788865 2 2 238988873321100 110124778999999998 56532100
Q ss_pred CCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCeeeEE
Q 023384 222 NAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKIT 270 (283)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 270 (283)
.....++.|.++||.+.++.
T Consensus 212 -----------------------------~~~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 212 -----------------------------AAGFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp -----------------------------CCHHHHHHHHHTTCEEEEEE
T ss_pred -----------------------------CcHHHHHHHHhCCeEEEecc
Confidence 12457788899999876654
No 317
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=88.61 E-value=0.69 Score=40.70 Aligned_cols=40 Identities=10% Similarity=0.023 Sum_probs=33.0
Q ss_pred CCCCeEEEEcCCccHHHHHHH-HHCCC-CeEEEeec-hHHHhc
Q 023384 117 EGLGSLVDVGGGNGSLSRIIS-EAFPG-IKCTVLDL-PHVVAN 156 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~-~~~p~-~~~~~~D~-~~~~~~ 156 (283)
++...|+|||++.|.++..++ +..++ .+++.++. |...+.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~ 267 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQT 267 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHH
Confidence 566899999999999999988 66765 79999998 765543
No 318
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=88.43 E-value=0.45 Score=39.01 Aligned_cols=40 Identities=15% Similarity=0.143 Sum_probs=32.8
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCC
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLP 158 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~ 158 (283)
.....|||..||+|..+.+..+. +.+++++|+ +..++.++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~~ 251 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQAN 251 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHH
Confidence 45679999999999999988776 678999999 76665543
No 319
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=87.68 E-value=2.2 Score=36.18 Aligned_cols=124 Identities=10% Similarity=0.046 Sum_probs=76.2
Q ss_pred CCeEEEEcCCccHHHHHHHHHCCCCe-E-EEeec-hHHHhcCCC--CCCeEEEEcCCCC-C---CC--CceEEEeccccc
Q 023384 119 LGSLVDVGGGNGSLSRIISEAFPGIK-C-TVLDL-PHVVANLPE--ADNLKYIAGDMFQ-F---IP--PADAFLFKLVFH 187 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~p~~~-~-~~~D~-~~~~~~a~~--~~rv~~~~~d~~~-~---~p--~~D~v~~~~vlh 187 (283)
..+++|+-||.|.++..+.++.-..+ + ..+|+ +..++..+. ... ++.+|+.+ . ++ .+|+++..--..
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~--~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ 87 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE--VQVKNLDSISIKQIESLNCNTWFMSPPCQ 87 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC--CBCCCTTTCCHHHHHHTCCCEEEECCCCT
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC--cccCChhhcCHHHhccCCCCEEEecCCcc
Confidence 45899999999999999988742234 4 58898 555443332 122 56677776 2 23 489999877666
Q ss_pred CC-----------ChhHHHHHHHHHHH-hhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHH
Q 023384 188 GL-----------GDEDGLKILKKRRA-AIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEW 255 (283)
Q Consensus 188 ~~-----------~d~~~~~iL~~~~~-~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~ 255 (283)
.| .|+ .-.++..+.+ .++....--+++++|.+..=. .+ .+.+.+
T Consensus 88 ~fs~S~ag~~~~~~d~-r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~---------------------~~--~~~~~i 143 (327)
T 3qv2_A 88 PYNNSIMSKHKDINDP-RAKSVLHLYRDILPYLINKPKHIFIENVPLFK---------------------ES--LVFKEI 143 (327)
T ss_dssp TCSHHHHTTTCTTTCG-GGHHHHHHHHTTGGGCSSCCSEEEEEECGGGG---------------------GS--HHHHHH
T ss_pred CcccccCCCCCCCccc-cchhHHHHHHHHHHHhccCCCEEEEEchhhhc---------------------Ch--HHHHHH
Confidence 66 222 2245555555 443200003678888665210 01 245788
Q ss_pred HHHHHHCCCCeee
Q 023384 256 AKLFFDACFSHYK 268 (283)
Q Consensus 256 ~~ll~~aGf~~~~ 268 (283)
.+.|++.|+.+..
T Consensus 144 ~~~l~~~GY~v~~ 156 (327)
T 3qv2_A 144 YNILIKNQYYIKD 156 (327)
T ss_dssp HHHHHHTTCEEEE
T ss_pred HHHHHhCCCEEEE
Confidence 8889999997654
No 320
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=87.35 E-value=2 Score=35.52 Aligned_cols=83 Identities=16% Similarity=0.107 Sum_probs=50.1
Q ss_pred CeEEEEcCCc--cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCCCCCceEEEecccccCCChhHHHH
Q 023384 120 GSLVDVGGGN--GSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLGDEDGLK 196 (283)
Q Consensus 120 ~~vlDvGgG~--G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~~~~ 196 (283)
.+|.=||+|. +.++..+++..+..++++.|. ++..+.+.+.........|..+...++|+|++.- ++.....
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilav-----p~~~~~~ 81 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAV-----PIKKTID 81 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECS-----CHHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcC-----CHHHHHH
Confidence 5788898875 233444555545678999998 6655543321111112233333334589998854 5555677
Q ss_pred HHHHHHHh-hcc
Q 023384 197 ILKKRRAA-IAS 207 (283)
Q Consensus 197 iL~~~~~~-L~p 207 (283)
+++.+.+. +++
T Consensus 82 v~~~l~~~~l~~ 93 (290)
T 3b1f_A 82 FIKILADLDLKE 93 (290)
T ss_dssp HHHHHHTSCCCT
T ss_pred HHHHHHhcCCCC
Confidence 88888888 887
No 321
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=85.06 E-value=2 Score=36.63 Aligned_cols=120 Identities=11% Similarity=0.096 Sum_probs=74.0
Q ss_pred CeEEEEcCCccHHHHHHHHHCCCCe-EEEeec-hHHHhcCCC-CCCeEEEEcCCCC-C---CC--CceEEEecccccCCC
Q 023384 120 GSLVDVGGGNGSLSRIISEAFPGIK-CTVLDL-PHVVANLPE-ADNLKYIAGDMFQ-F---IP--PADAFLFKLVFHGLG 190 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~p~~~-~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~-~---~p--~~D~v~~~~vlh~~~ 190 (283)
-+++|+=||.|.++..+.++.-..+ +..+|+ +...+..+. -....+..+|+.+ . ++ .+|+++...-...|+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPCQ~fS 83 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSPPCQPFT 83 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEECCCCCCSE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEecCCCcchh
Confidence 4799999999999999998843334 457888 554433322 2234466778766 2 33 489998866555553
Q ss_pred ---------hhHHHHHHHHHHHh---hc-cCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHH
Q 023384 191 ---------DEDGLKILKKRRAA---IA-SNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAK 257 (283)
Q Consensus 191 ---------d~~~~~iL~~~~~~---L~-p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ 257 (283)
|+ .-.++..+.+. ++ | +++++|.+..-.. + .+.+.+.+
T Consensus 84 ~ag~~~~~~d~-r~~L~~~~~r~i~~~~~P-----~~~vlENV~gl~~---------------------~--~~~~~i~~ 134 (333)
T 4h0n_A 84 RNGKYLDDNDP-RTNSFLYLIGILDQLDNV-----DYILMENVKGFEN---------------------S--TVRNLFID 134 (333)
T ss_dssp ETTEECCTTCT-TSCCHHHHHHHGGGCTTC-----CEEEEEECTTGGG---------------------S--HHHHHHHH
T ss_pred hhhhccCCcCc-ccccHHHHHHHHHHhcCC-----CEEEEecchhhhh---------------------h--hHHHHHHH
Confidence 21 11233344444 44 5 6788886653110 0 12467888
Q ss_pred HHHHCCCCeee
Q 023384 258 LFFDACFSHYK 268 (283)
Q Consensus 258 ll~~aGf~~~~ 268 (283)
.|++.|+.+..
T Consensus 135 ~l~~~GY~v~~ 145 (333)
T 4h0n_A 135 KLKECNFIYQE 145 (333)
T ss_dssp HHHHTTEEEEE
T ss_pred HHHhCCCeEEE
Confidence 99999987654
No 322
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=84.68 E-value=6.8 Score=30.42 Aligned_cols=95 Identities=12% Similarity=0.084 Sum_probs=60.6
Q ss_pred eEEEEcCCccHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCC----CCCceEEEeccccc--CCCh
Q 023384 121 SLVDVGGGNGSLSRIISEAF--PGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQF----IPPADAFLFKLVFH--GLGD 191 (283)
Q Consensus 121 ~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~----~p~~D~v~~~~vlh--~~~d 191 (283)
+||=.| |+|..+..+++++ .+.++++++. ++...... ..+++++.+|+.++ +.+.|+++...... ....
T Consensus 2 kilVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~ 79 (224)
T 3h2s_A 2 KIAVLG-ATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-GATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGRG 79 (224)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-CTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSCT
T ss_pred EEEEEc-CCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-CCCceEEecccccccHhhcccCCEEEECCccCCCcchh
Confidence 455554 5677666666544 3568888888 54444322 36799999999873 23578887765442 1122
Q ss_pred hHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 192 EDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 192 ~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
.......+++.++++. . |++++++..
T Consensus 80 ~~n~~~~~~l~~a~~~-~-~~~~v~~SS 105 (224)
T 3h2s_A 80 YLHLDFATHLVSLLRN-S-DTLAVFILG 105 (224)
T ss_dssp HHHHHHHHHHHHTCTT-C-CCEEEEECC
T ss_pred hHHHHHHHHHHHHHHH-c-CCcEEEEec
Confidence 3456677888888887 2 577777753
No 323
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=84.31 E-value=3.5 Score=34.86 Aligned_cols=92 Identities=13% Similarity=0.151 Sum_probs=58.7
Q ss_pred cCCCCeEEEEcCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCC---CC----CCceEEEecccc
Q 023384 116 FEGLGSLVDVGGGN-GSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQ---FI----PPADAFLFKLVF 186 (283)
Q Consensus 116 ~~~~~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~---~~----p~~D~v~~~~vl 186 (283)
.....+||-+|+|. |..+..+++.. +.++++.|. ++..+.+++..--.++..+-.+ .+ +.+|+++....
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g- 241 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAV- 241 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSC-
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCC-
Confidence 56678899999764 88999999886 559999998 6666655541111122211111 01 24788776432
Q ss_pred cCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 187 HGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 187 h~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
. ...++.+.+.|+| +|+++++..
T Consensus 242 ----~---~~~~~~~~~~l~~---~G~iv~~G~ 264 (340)
T 3s2e_A 242 ----S---PKAFSQAIGMVRR---GGTIALNGL 264 (340)
T ss_dssp ----C---HHHHHHHHHHEEE---EEEEEECSC
T ss_pred ----C---HHHHHHHHHHhcc---CCEEEEeCC
Confidence 1 2457888899999 799887653
No 324
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=83.96 E-value=9.2 Score=30.98 Aligned_cols=94 Identities=17% Similarity=0.122 Sum_probs=58.1
Q ss_pred CeEEEEcCCccHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCC-CCCCceEEEecccccCCChhHHH
Q 023384 120 GSLVDVGGGNGSLSRIISEAF--PGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQ-FIPPADAFLFKLVFHGLGDEDGL 195 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~-~~p~~D~v~~~~vlh~~~d~~~~ 195 (283)
.+||=.| + |..+..+++++ .+.++++++. +....... ..+++++.+|+.+ .+.+.|+|+.........+....
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~~~~~~d~vi~~a~~~~~~~~~~~ 82 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR-ASGAEPLLWPGEEPSLDGVTHLLISTAPDSGGDPVLA 82 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH-HTTEEEEESSSSCCCCTTCCEEEECCCCBTTBCHHHH
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh-hCCCeEEEecccccccCCCCEEEECCCccccccHHHH
Confidence 5899998 4 88888877765 2467888887 43332221 2578999999887 44468988876655444444444
Q ss_pred HHHHHHHHhhccCCCCcEEEEEee
Q 023384 196 KILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 196 ~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
.+++.+.+.-.. -.+++.+..
T Consensus 83 ~l~~a~~~~~~~---~~~~v~~Ss 103 (286)
T 3ius_A 83 ALGDQIAARAAQ---FRWVGYLST 103 (286)
T ss_dssp HHHHHHHHTGGG---CSEEEEEEE
T ss_pred HHHHHHHhhcCC---ceEEEEeec
Confidence 455544443121 256666553
No 325
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=83.00 E-value=6 Score=28.05 Aligned_cols=81 Identities=15% Similarity=0.210 Sum_probs=47.2
Q ss_pred CeEEEEcCCccHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCC-------CCCceEEEecccccCC
Q 023384 120 GSLVDVGGGNGSLSRIISEAF--PGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQF-------IPPADAFLFKLVFHGL 189 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~-------~p~~D~v~~~~vlh~~ 189 (283)
.+|+=+|+ |..+..+++.+ .+.+++++|. ++.++...+...+.++.+|..++ ...+|+++..-
T Consensus 5 m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~----- 77 (140)
T 1lss_A 5 MYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT----- 77 (140)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC-----
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEee-----
Confidence 57888877 45554444332 3568999998 65555443222466777877541 33589888763
Q ss_pred ChhHHHHHHHHHHHhhcc
Q 023384 190 GDEDGLKILKKRRAAIAS 207 (283)
Q Consensus 190 ~d~~~~~iL~~~~~~L~p 207 (283)
++++....+..+.+.+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~ 95 (140)
T 1lss_A 78 GKEEVNLMSSLLAKSYGI 95 (140)
T ss_dssp SCHHHHHHHHHHHHHTTC
T ss_pred CCchHHHHHHHHHHHcCC
Confidence 223333344455566776
No 326
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=82.57 E-value=5.8 Score=28.49 Aligned_cols=77 Identities=21% Similarity=0.227 Sum_probs=47.1
Q ss_pred CeEEEEcCCccHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCC-------CCCceEEEecccccCC
Q 023384 120 GSLVDVGGGNGSLSRIISEAF--PGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQF-------IPPADAFLFKLVFHGL 189 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~-------~p~~D~v~~~~vlh~~ 189 (283)
.+|+=+|+| ..+..+++.+ -+.+++++|. ++.++.+++ ..+.++.+|..++ ...+|+++..--
T Consensus 7 ~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~-~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~---- 79 (141)
T 3llv_A 7 YEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLED-EGFDAVIADPTDESFYRSLDLEGVSAVLITGS---- 79 (141)
T ss_dssp CSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TTCEEEECCTTCHHHHHHSCCTTCSEEEECCS----
T ss_pred CEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-CCCcEEECCCCCHHHHHhCCcccCCEEEEecC----
Confidence 578889885 4555444433 2568999998 666655543 3577888998873 235888877442
Q ss_pred ChhHHHHHHHHHHH
Q 023384 190 GDEDGLKILKKRRA 203 (283)
Q Consensus 190 ~d~~~~~iL~~~~~ 203 (283)
+++....+...+++
T Consensus 80 ~~~~n~~~~~~a~~ 93 (141)
T 3llv_A 80 DDEFNLKILKALRS 93 (141)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 34444444444333
No 327
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=81.82 E-value=4.6 Score=34.73 Aligned_cols=94 Identities=9% Similarity=0.082 Sum_probs=59.4
Q ss_pred cCCCCeEEEEcCC-ccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcC-----CCCC----CC-CceEEEec
Q 023384 116 FEGLGSLVDVGGG-NGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGD-----MFQF----IP-PADAFLFK 183 (283)
Q Consensus 116 ~~~~~~vlDvGgG-~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d-----~~~~----~p-~~D~v~~~ 183 (283)
.....+||-+|+| .|.++..+++..-..+++++|. ++.++.+++..--.++... +.+. .+ .+|+++-.
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~ 270 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFEC 270 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEEC
Confidence 5567889999876 4888888888764448999996 7666666552111122211 1110 01 48888764
Q ss_pred ccccCCChhHHHHHHHHHHHhhccCCCC-cEEEEEeee
Q 023384 184 LVFHGLGDEDGLKILKKRRAAIASNGER-GKVIIIDIV 220 (283)
Q Consensus 184 ~vlh~~~d~~~~~iL~~~~~~L~p~~~g-g~lli~d~~ 220 (283)
.- . ...++...++|++ | |+++++-..
T Consensus 271 ~g-----~---~~~~~~~~~~l~~---g~G~iv~~G~~ 297 (378)
T 3uko_A 271 IG-----N---VSVMRAALECCHK---GWGTSVIVGVA 297 (378)
T ss_dssp SC-----C---HHHHHHHHHTBCT---TTCEEEECSCC
T ss_pred CC-----C---HHHHHHHHHHhhc---cCCEEEEEccc
Confidence 32 2 2457888899998 6 898887653
No 328
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=81.19 E-value=4 Score=34.62 Aligned_cols=90 Identities=14% Similarity=0.141 Sum_probs=57.8
Q ss_pred cCCCCeEEEEcCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCCCC-CceEEEecccccCCChh
Q 023384 116 FEGLGSLVDVGGGN-GSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQFIP-PADAFLFKLVFHGLGDE 192 (283)
Q Consensus 116 ~~~~~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~~p-~~D~v~~~~vlh~~~d~ 192 (283)
.....+||-+|+|. |..+..+++.. +.++++.|. ++..+.+++..--.++ .|. +.+. .+|+++-.-- .+
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~v~-~~~-~~~~~~~D~vid~~g-----~~ 245 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALSMGVKHFY-TDP-KQCKEELDFIISTIP-----TH 245 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHHTTCSEEE-SSG-GGCCSCEEEEEECCC-----SC
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhcCCCeec-CCH-HHHhcCCCEEEECCC-----cH
Confidence 66778999999765 88888888876 569999887 5555554441111122 221 1222 5888875432 11
Q ss_pred HHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 193 DGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 193 ~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
..++...+.|+| +|+++++-.
T Consensus 246 ---~~~~~~~~~l~~---~G~iv~~G~ 266 (348)
T 3two_A 246 ---YDLKDYLKLLTY---NGDLALVGL 266 (348)
T ss_dssp ---CCHHHHHTTEEE---EEEEEECCC
T ss_pred ---HHHHHHHHHHhc---CCEEEEECC
Confidence 236778889999 799888754
No 329
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=80.85 E-value=7.7 Score=27.96 Aligned_cols=87 Identities=20% Similarity=0.185 Sum_probs=52.7
Q ss_pred CeEEEEcCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCC-------CCCceEEEecccccCCC
Q 023384 120 GSLVDVGGGN-GSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQF-------IPPADAFLFKLVFHGLG 190 (283)
Q Consensus 120 ~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~-------~p~~D~v~~~~vlh~~~ 190 (283)
.+|+=+|+|. |......+.+ -+.+++++|. ++.++.+++ ..+.++.+|..++ ...+|++++.-- +
T Consensus 8 ~~viIiG~G~~G~~la~~L~~-~g~~v~vid~~~~~~~~~~~-~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~----~ 81 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLA-SDIPLVVIETSRTRVDELRE-RGVRAVLGNAANEEIMQLAHLECAKWLILTIP----N 81 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-TTCCEEEEESCHHHHHHHHH-TTCEEEESCTTSHHHHHHTTGGGCSEEEECCS----C
T ss_pred CCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHH-cCCCEEECCCCCHHHHHhcCcccCCEEEEECC----C
Confidence 5788898864 4333333333 3678999999 777766553 4677889998773 124888877431 2
Q ss_pred hhHHHHHHHHHHHhhccCCCCcEEEE
Q 023384 191 DEDGLKILKKRRAAIASNGERGKVII 216 (283)
Q Consensus 191 d~~~~~iL~~~~~~L~p~~~gg~lli 216 (283)
++....+.. ..+.+.| +.+++.
T Consensus 82 ~~~n~~~~~-~a~~~~~---~~~iia 103 (140)
T 3fwz_A 82 GYEAGEIVA-SARAKNP---DIEIIA 103 (140)
T ss_dssp HHHHHHHHH-HHHHHCS---SSEEEE
T ss_pred hHHHHHHHH-HHHHHCC---CCeEEE
Confidence 333444444 4455666 455443
No 330
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=80.63 E-value=3.7 Score=35.67 Aligned_cols=101 Identities=19% Similarity=0.119 Sum_probs=61.6
Q ss_pred cCCCCeEEEEcCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEc---CC-CCCC-----C-CceEEEec
Q 023384 116 FEGLGSLVDVGGGN-GSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAG---DM-FQFI-----P-PADAFLFK 183 (283)
Q Consensus 116 ~~~~~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~---d~-~~~~-----p-~~D~v~~~ 183 (283)
+....+||-+|+|. |.++..+++..-..++++.|. ++..+.+++.. ..++.. |+ .+.+ . .+|+++-.
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lG-a~~i~~~~~~~~~~~~~~~~~g~g~Dvvid~ 261 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAG-FETIDLRNSAPLRDQIDQILGKPEVDCGVDA 261 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTT-CEEEETTSSSCHHHHHHHHHSSSCEEEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcC-CcEEcCCCcchHHHHHHHHhCCCCCCEEEEC
Confidence 66778999999876 888888988764338999997 66666665421 123322 21 1100 1 48998765
Q ss_pred ccccCCC--h----hHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 184 LVFHGLG--D----EDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 184 ~vlh~~~--d----~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
---.... + ......++...++|++ ||+++++-..
T Consensus 262 ~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~---gG~iv~~G~~ 301 (398)
T 2dph_A 262 VGFEAHGLGDEANTETPNGALNSLFDVVRA---GGAIGIPGIY 301 (398)
T ss_dssp SCTTCBCSGGGTTSBCTTHHHHHHHHHEEE---EEEEECCSCC
T ss_pred CCCccccccccccccccHHHHHHHHHHHhc---CCEEEEeccc
Confidence 4321100 0 0011357888899999 7998876543
No 331
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=80.11 E-value=17 Score=28.64 Aligned_cols=86 Identities=13% Similarity=0.079 Sum_probs=54.0
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCC--CeEEEeec-hHHHhcCCCCCCeEEEEcCCCCC-------CCCceEEEeccccc
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPG--IKCTVLDL-PHVVANLPEADNLKYIAGDMFQF-------IPPADAFLFKLVFH 187 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~--~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~-------~p~~D~v~~~~vlh 187 (283)
...+|+=+|+ |..+..+++..-. . ++++|. ++.++.+. ..+.++.+|..++ +..+|++++..
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~--- 79 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR--SGANFVHGDPTRVSDLEKANVRGARAVIVDL--- 79 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--TTCEEEESCTTCHHHHHHTTCTTCSEEEECC---
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--cCCeEEEcCCCCHHHHHhcCcchhcEEEEcC---
Confidence 3468888887 6777888777643 4 788888 66665544 4588999998762 33588888743
Q ss_pred CCChhHHHHHHHHHHHhhccCCCCcEEEE
Q 023384 188 GLGDEDGLKILKKRRAAIASNGERGKVII 216 (283)
Q Consensus 188 ~~~d~~~~~iL~~~~~~L~p~~~gg~lli 216 (283)
++++....+....+.+.| ..+++.
T Consensus 80 --~~d~~n~~~~~~a~~~~~---~~~iia 103 (234)
T 2aef_A 80 --ESDSETIHCILGIRKIDE---SVRIIA 103 (234)
T ss_dssp --SCHHHHHHHHHHHHHHCS---SSEEEE
T ss_pred --CCcHHHHHHHHHHHHHCC---CCeEEE
Confidence 333323334445556777 345544
No 332
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=79.96 E-value=3.9 Score=31.93 Aligned_cols=136 Identities=9% Similarity=0.070 Sum_probs=72.7
Q ss_pred CeEEEEcCCccHHHHHHHHHC---CCCeEEEeec-hH-HHhcCC-CCCCeEEEEcCCCCC------CCCceEEEeccccc
Q 023384 120 GSLVDVGGGNGSLSRIISEAF---PGIKCTVLDL-PH-VVANLP-EADNLKYIAGDMFQF------IPPADAFLFKLVFH 187 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~---p~~~~~~~D~-~~-~~~~a~-~~~rv~~~~~d~~~~------~p~~D~v~~~~vlh 187 (283)
++||=.| |+|..+.++++.+ .+.++++++. ++ .++... ...++.++.+|+.++ +...|+++......
T Consensus 6 k~vlVtG-asg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~ 84 (221)
T 3r6d_A 6 XYITILG-AAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES 84 (221)
T ss_dssp SEEEEES-TTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred EEEEEEe-CCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence 3477666 4555555555432 4678999988 54 433221 256899999999872 23478888765432
Q ss_pred CCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccC-CccCCHHHHHHHHHHCCCCe
Q 023384 188 GLGDEDGLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNAT-GKERTESEWAKLFFDACFSH 266 (283)
Q Consensus 188 ~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~~e~~~ll~~aGf~~ 266 (283)
+- . .+++.++++..+ .++++.+............. ..+.. .. .+ ....+....++++++.|++.
T Consensus 85 ---n~---~-~~~~~~~~~~~~-~~~iv~iSs~~~~~~~~~~~---~~~~~-~~---~~~~y~~~K~~~e~~~~~~~i~~ 149 (221)
T 3r6d_A 85 ---GS---D-MASIVKALSRXN-IRRVIGVSMAGLSGEFPVAL---EKWTF-DN---LPISYVQGERQARNVLRESNLNY 149 (221)
T ss_dssp ---HH---H-HHHHHHHHHHTT-CCEEEEEEETTTTSCSCHHH---HHHHH-HT---SCHHHHHHHHHHHHHHHHSCSEE
T ss_pred ---Ch---h-HHHHHHHHHhcC-CCeEEEEeeceecCCCCccc---ccccc-cc---cccHHHHHHHHHHHHHHhCCCCE
Confidence 11 1 555556665411 35777666543222111100 00000 00 00 11223556677888889887
Q ss_pred eeEEE
Q 023384 267 YKITP 271 (283)
Q Consensus 267 ~~~~~ 271 (283)
.-+.+
T Consensus 150 ~~vrp 154 (221)
T 3r6d_A 150 TILRL 154 (221)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 66654
No 333
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=79.86 E-value=5.9 Score=33.98 Aligned_cols=94 Identities=15% Similarity=0.191 Sum_probs=58.9
Q ss_pred cCCCCeEEEEcCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEE---cCCCC---C---C--CCceEEE
Q 023384 116 FEGLGSLVDVGGGN-GSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIA---GDMFQ---F---I--PPADAFL 181 (283)
Q Consensus 116 ~~~~~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~---~d~~~---~---~--p~~D~v~ 181 (283)
.....+||-+|+|. |.++..+++..-.-++++.|. ++..+.+++ ... .++. .|+.+ . . ..+|+++
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~vi~~~~~~~~~~i~~~~~~~~gg~Dvvi 258 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGAT-ATVDPSAGDVVEAIAGPVGLVPGGVDVVI 258 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCS-EEECTTSSCHHHHHHSTTSSSTTCEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCC-EEECCCCcCHHHHHHhhhhccCCCCCEEE
Confidence 56678999998765 888888888864448899987 555555443 111 1111 11111 0 1 1488887
Q ss_pred ecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 182 FKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 182 ~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
-.. .. ...++.+.++|++ ||+++++....
T Consensus 259 d~~-----G~---~~~~~~~~~~l~~---~G~vv~~G~~~ 287 (370)
T 4ej6_A 259 ECA-----GV---AETVKQSTRLAKA---GGTVVILGVLP 287 (370)
T ss_dssp ECS-----CC---HHHHHHHHHHEEE---EEEEEECSCCC
T ss_pred ECC-----CC---HHHHHHHHHHhcc---CCEEEEEeccC
Confidence 643 21 1457888899999 79988876543
No 334
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=79.63 E-value=5.2 Score=34.05 Aligned_cols=92 Identities=13% Similarity=0.169 Sum_probs=58.2
Q ss_pred cCCCCeEEEEcCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEcC------CCCCC-----CCceEEE
Q 023384 116 FEGLGSLVDVGGGN-GSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAGD------MFQFI-----PPADAFL 181 (283)
Q Consensus 116 ~~~~~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d------~~~~~-----p~~D~v~ 181 (283)
.....+||-+|+|. |.++..+++..-..++++.|. ++..+.+++ ... .++..+ +.+.+ ..+|+++
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~vi~~~~~~~~~~~~~i~~~~~~g~D~vi 247 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGAD-LVLQISKESPQEIARKVEGQLGCKPEVTI 247 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS-EEEECSSCCHHHHHHHHHHHHTSCCSEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCC-EEEcCcccccchHHHHHHHHhCCCCCEEE
Confidence 56678999999875 888888988864338999987 555555543 111 222211 11111 2488887
Q ss_pred ecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 182 FKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 182 ~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
-.-- .+ ..++...++|+| ||+++++-.
T Consensus 248 d~~g-----~~---~~~~~~~~~l~~---~G~iv~~G~ 274 (356)
T 1pl8_A 248 ECTG-----AE---ASIQAGIYATRS---GGTLVLVGL 274 (356)
T ss_dssp ECSC-----CH---HHHHHHHHHSCT---TCEEEECSC
T ss_pred ECCC-----Ch---HHHHHHHHHhcC---CCEEEEEec
Confidence 6432 11 346778889999 799888754
No 335
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=79.14 E-value=6.5 Score=33.22 Aligned_cols=94 Identities=17% Similarity=0.175 Sum_probs=61.0
Q ss_pred cCCCCeEEEEcCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcC--CCCCC----C--CceEEEeccc
Q 023384 116 FEGLGSLVDVGGGN-GSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGD--MFQFI----P--PADAFLFKLV 185 (283)
Q Consensus 116 ~~~~~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d--~~~~~----p--~~D~v~~~~v 185 (283)
.....+||-+|+|. |..+..+++.....++++.|. ++..+.+++..--.++..+ +.+.+ + .+|+++-.--
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~G 248 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVG 248 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECCC
Confidence 56678999998764 888888998876789999998 6666655541111122221 11111 1 4788776432
Q ss_pred ccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 186 FHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 186 lh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
.+ ..++...++|++ +|+++++-..
T Consensus 249 -----~~---~~~~~~~~~l~~---~G~iv~~G~~ 272 (345)
T 3jv7_A 249 -----AQ---STIDTAQQVVAV---DGHISVVGIH 272 (345)
T ss_dssp -----CH---HHHHHHHHHEEE---EEEEEECSCC
T ss_pred -----CH---HHHHHHHHHHhc---CCEEEEECCC
Confidence 21 357888899999 7998887643
No 336
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=78.86 E-value=6.1 Score=33.20 Aligned_cols=120 Identities=14% Similarity=0.151 Sum_probs=72.8
Q ss_pred eEEEEcCCccHHHHHHHHHCCCCeE-EEeec-hHHHhcCCCCCCeEEEEcCCCC----CCCCceEEEecccccCCC----
Q 023384 121 SLVDVGGGNGSLSRIISEAFPGIKC-TVLDL-PHVVANLPEADNLKYIAGDMFQ----FIPPADAFLFKLVFHGLG---- 190 (283)
Q Consensus 121 ~vlDvGgG~G~~~~~l~~~~p~~~~-~~~D~-~~~~~~a~~~~rv~~~~~d~~~----~~p~~D~v~~~~vlh~~~---- 190 (283)
+|||+=||.|.++..+.++ +.++ ..+|+ +..++.-+..-.-.++.+|+.+ .+|..|+++..--...|+
T Consensus 2 kvidLFsG~GG~~~G~~~a--G~~~v~a~e~d~~a~~ty~~N~~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS~ag~ 79 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA--GFRIICANEYDKSIWKTYESNHSAKLIKGDISKISSDEFPKCDGIIGGPPSQSWSEGGS 79 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT--TCEEEEEEECCTTTHHHHHHHCCSEEEESCGGGCCGGGSCCCSEEECCCCGGGTEETTE
T ss_pred eEEEeCcCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHHCCCCcccCChhhCCHhhCCcccEEEecCCCCCcCCCCC
Confidence 6999999999999998887 4564 46777 4443332221123567788876 256789998765444443
Q ss_pred -----hhH--HHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCC
Q 023384 191 -----DED--GLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAC 263 (283)
Q Consensus 191 -----d~~--~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aG 263 (283)
|+. ...-+-++.+.++| +++++|.+..=.. .......+++.+.|++.|
T Consensus 80 ~~g~~d~R~~L~~~~~r~i~~~~P-----k~~~~ENV~gl~~--------------------~~~~~~~~~i~~~l~~~G 134 (331)
T 3ubt_Y 80 LRGIDDPRGKLFYEYIRILKQKKP-----IFFLAENVKGMMA--------------------QRHNKAVQEFIQEFDNAG 134 (331)
T ss_dssp ECCTTCGGGHHHHHHHHHHHHHCC-----SEEEEEECCGGGG--------------------CTTSHHHHHHHHHHHHHT
T ss_pred ccCCCCchhHHHHHHHHHHhccCC-----eEEEeeeeccccc--------------------ccccchhhhhhhhhccCC
Confidence 322 22223345566777 6788887642100 011123567778888889
Q ss_pred CCee
Q 023384 264 FSHY 267 (283)
Q Consensus 264 f~~~ 267 (283)
+.+.
T Consensus 135 Y~v~ 138 (331)
T 3ubt_Y 135 YDVH 138 (331)
T ss_dssp EEEE
T ss_pred cEEE
Confidence 8654
No 337
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=78.07 E-value=5.7 Score=34.00 Aligned_cols=93 Identities=16% Similarity=0.147 Sum_probs=58.8
Q ss_pred cCCCCeEEEEcCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEc---CCCCC----CC-CceEEEecc
Q 023384 116 FEGLGSLVDVGGGN-GSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAG---DMFQF----IP-PADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~---d~~~~----~p-~~D~v~~~~ 184 (283)
.....+||-+|+|. |..+..+++..-..++++.|. ++..+.+++ ... .++.. |+.+. .+ .+|+++-..
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~vi~~~~~~~~~~~~~~~~gg~D~vid~~ 266 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGAT-HVINSKTQDPVAAIKEITDGGVNFALEST 266 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCS-EEEETTTSCHHHHHHHHTTSCEEEEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCC-EEecCCccCHHHHHHHhcCCCCcEEEECC
Confidence 55678999999876 888888888763336888987 666655544 111 12221 11110 11 488887543
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
- . ...++...+.|++ +|+++++-..
T Consensus 267 g-----~---~~~~~~~~~~l~~---~G~iv~~G~~ 291 (371)
T 1f8f_A 267 G-----S---PEILKQGVDALGI---LGKIAVVGAP 291 (371)
T ss_dssp C-----C---HHHHHHHHHTEEE---EEEEEECCCC
T ss_pred C-----C---HHHHHHHHHHHhc---CCEEEEeCCC
Confidence 2 1 1457888899999 7998887643
No 338
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=78.06 E-value=8.5 Score=30.05 Aligned_cols=80 Identities=8% Similarity=0.115 Sum_probs=48.8
Q ss_pred eEEEEcCCccHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCC-------CCCceEEEecccccCCC
Q 023384 121 SLVDVGGGNGSLSRIISEAF--PGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQF-------IPPADAFLFKLVFHGLG 190 (283)
Q Consensus 121 ~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~-------~p~~D~v~~~~vlh~~~ 190 (283)
+|+=+|+ |..+..+++.+ .+.+++++|. ++.++...+...+.++.+|..++ +..+|++++.. +
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~-----~ 74 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILT-----P 74 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECC-----S
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEec-----C
Confidence 4666775 56666655543 3678999998 66665533223577899998872 23589888743 3
Q ss_pred hhHHHHHHHHHHHhhcc
Q 023384 191 DEDGLKILKKRRAAIAS 207 (283)
Q Consensus 191 d~~~~~iL~~~~~~L~p 207 (283)
++....++....+.+.|
T Consensus 75 ~d~~n~~~~~~a~~~~~ 91 (218)
T 3l4b_C 75 RDEVNLFIAQLVMKDFG 91 (218)
T ss_dssp CHHHHHHHHHHHHHTSC
T ss_pred CcHHHHHHHHHHHHHcC
Confidence 33333444445555554
No 339
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=78.03 E-value=16 Score=29.51 Aligned_cols=96 Identities=14% Similarity=0.062 Sum_probs=56.7
Q ss_pred eEEEEcCCccHHHHHHHHHC---CCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCC------CCCceEEEecccccCCC
Q 023384 121 SLVDVGGGNGSLSRIISEAF---PGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQF------IPPADAFLFKLVFHGLG 190 (283)
Q Consensus 121 ~vlDvGgG~G~~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~------~p~~D~v~~~~vlh~~~ 190 (283)
+||=. ||+|..+..+++.+ ++.++++++. ++..... ...+++++.+|+.++ +.+.|+++....... .
T Consensus 2 ~ilVt-GatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~-~ 78 (289)
T 3e48_A 2 NIMLT-GATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-WRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIH-P 78 (289)
T ss_dssp CEEEE-TTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-GBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCC-S
T ss_pred EEEEE-cCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-hhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCc-c
Confidence 35544 45677777666554 4678888887 4432221 146899999999873 335788876554322 2
Q ss_pred hhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 191 DEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 191 d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
........+++.++++..+ -++++.+...
T Consensus 79 ~~~~~~~~~~l~~aa~~~g-v~~iv~~Ss~ 107 (289)
T 3e48_A 79 SFKRIPEVENLVYAAKQSG-VAHIIFIGYY 107 (289)
T ss_dssp HHHHHHHHHHHHHHHHHTT-CCEEEEEEES
T ss_pred chhhHHHHHHHHHHHHHcC-CCEEEEEccc
Confidence 2233455667777776521 2466666653
No 340
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=77.11 E-value=20 Score=32.01 Aligned_cols=101 Identities=13% Similarity=0.140 Sum_probs=59.6
Q ss_pred CCCCeEEEEcCCccHHHHHH-HHHCCCC-eEEEeec-hH----HHhcCCC---------------------CCCeEEEEc
Q 023384 117 EGLGSLVDVGGGNGSLSRII-SEAFPGI-KCTVLDL-PH----VVANLPE---------------------ADNLKYIAG 168 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l-~~~~p~~-~~~~~D~-~~----~~~~a~~---------------------~~rv~~~~~ 168 (283)
....+|.=||.|.=....+. +...|+. +++++|+ ++ .++..++ ..++.+ ..
T Consensus 16 ~~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~-tt 94 (478)
T 3g79_A 16 GPIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFEC-TP 94 (478)
T ss_dssp CSCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEE-ES
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEE-eC
Confidence 34468999998865444433 3333467 9999999 66 5544332 123333 23
Q ss_pred CCCCCCCCceEEEecccccC-------CChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCC
Q 023384 169 DMFQFIPPADAFLFKLVFHG-------LGDEDGLKILKKRRAAIASNGERGKVIIIDIVINA 223 (283)
Q Consensus 169 d~~~~~p~~D~v~~~~vlh~-------~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~ 223 (283)
| .+....+|+|+++-.-.. .+-.......+.+.+.|++ |.++|.....+.
T Consensus 95 d-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~----g~iVV~~STv~p 151 (478)
T 3g79_A 95 D-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKP----GMLVVLESTITP 151 (478)
T ss_dssp C-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCT----TCEEEECSCCCT
T ss_pred c-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCC----CcEEEEeCCCCh
Confidence 3 233445899988643221 1123356678889999998 667776655443
No 341
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=76.30 E-value=17 Score=30.51 Aligned_cols=92 Identities=14% Similarity=0.111 Sum_probs=56.6
Q ss_pred cCCCCeEEEEcCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEE---EcCCCCC----CC--CceEEEecc
Q 023384 116 FEGLGSLVDVGGGN-GSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYI---AGDMFQF----IP--PADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~---~~d~~~~----~p--~~D~v~~~~ 184 (283)
.....+||=+|+|. |.++..++++.-..++++.|. ++-.+.+++..--.++ ..|+.+. .. .+|+++...
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~~ 240 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCA 240 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEECC
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEec
Confidence 56678899999875 456666777777889999998 6655555441111122 1222211 11 356666543
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
. . ...+....+++++ +|+++++-
T Consensus 241 ~----~----~~~~~~~~~~l~~---~G~~v~~g 263 (348)
T 4eez_A 241 V----A----RIAFEQAVASLKP---MGKMVAVA 263 (348)
T ss_dssp S----C----HHHHHHHHHTEEE---EEEEEECC
T ss_pred c----C----cchhheeheeecC---CceEEEEe
Confidence 2 1 2457788899999 78887765
No 342
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=75.53 E-value=18 Score=27.04 Aligned_cols=52 Identities=19% Similarity=0.295 Sum_probs=39.0
Q ss_pred CCeEEEEcCCccHHHHHHHHHCCCCeEEEeechH--HHhcCCCCCCeEEEEcCCCC
Q 023384 119 LGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPH--VVANLPEADNLKYIAGDMFQ 172 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~--~~~~a~~~~rv~~~~~d~~~ 172 (283)
..-|||+|=|+|..=-.+.+.+|+-++.++|..- --... .+.=.++.||+.+
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp~~~--P~~e~~ilGdi~~ 94 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHPDST--PPEAQLILGDIRE 94 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCGGGC--CCGGGEEESCHHH
T ss_pred CCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCCCCC--CchHheecccHHH
Confidence 4689999999999999999999999999999621 11111 1223467888776
No 343
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=75.13 E-value=2.6 Score=37.20 Aligned_cols=33 Identities=21% Similarity=0.375 Sum_probs=26.3
Q ss_pred CCeEEEEcCCccHHHHHHHHHCC-----CCeEEEeech
Q 023384 119 LGSLVDVGGGNGSLSRIISEAFP-----GIKCTVLDLP 151 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~p-----~~~~~~~D~~ 151 (283)
..+|+|+|+|+|.++..+++... ..+++.++.+
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~S 175 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLS 175 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTT
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcC
Confidence 47999999999999999876542 2378899873
No 344
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=74.90 E-value=19 Score=26.07 Aligned_cols=87 Identities=20% Similarity=0.220 Sum_probs=50.3
Q ss_pred CeEEEEcCCccHHHHHHHHHC--CCCeEEEeec-h-HHHhcCCC--CCCeEEEEcCCCCC-------CCCceEEEecccc
Q 023384 120 GSLVDVGGGNGSLSRIISEAF--PGIKCTVLDL-P-HVVANLPE--ADNLKYIAGDMFQF-------IPPADAFLFKLVF 186 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~-~-~~~~~a~~--~~rv~~~~~d~~~~-------~p~~D~v~~~~vl 186 (283)
.+|+=+|+ |..+..+++.. .+.+++++|. + +..+...+ ...+.++.||..++ +..+|++++.-
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~-- 79 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS-- 79 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS--
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEec--
Confidence 56777775 56666555543 3567899987 4 32222211 34588899998762 33588887754
Q ss_pred cCCChhHHHHHHHHHHHhhccCCCCcEEEE
Q 023384 187 HGLGDEDGLKILKKRRAAIASNGERGKVII 216 (283)
Q Consensus 187 h~~~d~~~~~iL~~~~~~L~p~~~gg~lli 216 (283)
++++.-..+....+.+.| ..+++.
T Consensus 80 ---~~d~~n~~~~~~a~~~~~---~~~ii~ 103 (153)
T 1id1_A 80 ---DNDADNAFVVLSAKDMSS---DVKTVL 103 (153)
T ss_dssp ---SCHHHHHHHHHHHHHHTS---SSCEEE
T ss_pred ---CChHHHHHHHHHHHHHCC---CCEEEE
Confidence 233333344455556655 355544
No 345
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=74.12 E-value=7.9 Score=29.61 Aligned_cols=89 Identities=15% Similarity=0.081 Sum_probs=55.2
Q ss_pred cCCCCeEEEEc--CCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEcCCCC-C--------C--CCceEE
Q 023384 116 FEGLGSLVDVG--GGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAGDMFQ-F--------I--PPADAF 180 (283)
Q Consensus 116 ~~~~~~vlDvG--gG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~-~--------~--p~~D~v 180 (283)
.....+||.+| ||.|..+..+++.. +.++++.|. ++..+.+++ .... .. |..+ + . ..+|++
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~g~~~-~~--d~~~~~~~~~~~~~~~~~~~D~v 111 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLSRLGVEY-VG--DSRSVDFADEILELTDGYGVDVV 111 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHTTCCSE-EE--ETTCSTHHHHHHHHTTTCCEEEE
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCE-Ee--eCCcHHHHHHHHHHhCCCCCeEE
Confidence 55678999999 46677777777654 468888888 555544433 1111 12 2222 1 1 137888
Q ss_pred EecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 181 LFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 181 ~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
+.+. .. ..++.+.+.|+| ||+++++-..
T Consensus 112 i~~~-----g~----~~~~~~~~~l~~---~G~~v~~g~~ 139 (198)
T 1pqw_A 112 LNSL-----AG----EAIQRGVQILAP---GGRFIELGKK 139 (198)
T ss_dssp EECC-----CT----HHHHHHHHTEEE---EEEEEECSCG
T ss_pred EECC-----ch----HHHHHHHHHhcc---CCEEEEEcCC
Confidence 7543 22 347788899999 7988876543
No 346
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=72.55 E-value=4.4 Score=34.32 Aligned_cols=92 Identities=13% Similarity=0.042 Sum_probs=57.7
Q ss_pred cCCCCeEEEEcCCc-cHHHHHHHHHC-CCCeEEEeec-hHHHhcCCCCCCeEEEE----cCCCCC--CC-CceEEEeccc
Q 023384 116 FEGLGSLVDVGGGN-GSLSRIISEAF-PGIKCTVLDL-PHVVANLPEADNLKYIA----GDMFQF--IP-PADAFLFKLV 185 (283)
Q Consensus 116 ~~~~~~vlDvGgG~-G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~rv~~~~----~d~~~~--~p-~~D~v~~~~v 185 (283)
. ...+||-+|+|. |..+..+++.. |+.++++.|. ++..+.+++..--.++. .|+... -+ .+|+++-.--
T Consensus 169 ~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g 247 (344)
T 2h6e_A 169 F-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVG 247 (344)
T ss_dssp C-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSC
T ss_pred C-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCC
Confidence 5 678999999764 77888888864 5789999997 65555554311111111 111111 12 4898876542
Q ss_pred ccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 186 FHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 186 lh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
.+ ..++.+.+.|++ +|+++++-.
T Consensus 248 -----~~---~~~~~~~~~l~~---~G~iv~~g~ 270 (344)
T 2h6e_A 248 -----TE---ETTYNLGKLLAQ---EGAIILVGM 270 (344)
T ss_dssp -----CH---HHHHHHHHHEEE---EEEEEECCC
T ss_pred -----Ch---HHHHHHHHHhhc---CCEEEEeCC
Confidence 11 357888899999 798887654
No 347
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=71.98 E-value=4 Score=33.86 Aligned_cols=33 Identities=24% Similarity=0.380 Sum_probs=28.8
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCC----CeEEEeec
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPG----IKCTVLDL 150 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~----~~~~~~D~ 150 (283)
+...|+=||||.|.....|++.+|+ ++++++|.
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDP 96 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDG 96 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEES
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcC
Confidence 3469999999999999999998876 68899996
No 348
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=71.92 E-value=22 Score=30.53 Aligned_cols=98 Identities=16% Similarity=0.155 Sum_probs=60.4
Q ss_pred cCCCCeEEEEcCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCC----CCCC------CCceEEEec
Q 023384 116 FEGLGSLVDVGGGN-GSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDM----FQFI------PPADAFLFK 183 (283)
Q Consensus 116 ~~~~~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~----~~~~------p~~D~v~~~ 183 (283)
+....+||-+|+|. |.++..+++..-.-++++.|. ++.++.+++.. ...+..+- .+.+ ..+|+++-.
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lG-a~~i~~~~~~~~~~~v~~~t~g~g~Dvvid~ 261 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQG-FEIADLSLDTPLHEQIAALLGEPEVDCAVDA 261 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTT-CEEEETTSSSCHHHHHHHHHSSSCEEEEEEC
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcC-CcEEccCCcchHHHHHHHHhCCCCCCEEEEC
Confidence 56678999999765 888889999874337888987 66666555411 12232211 1100 148998765
Q ss_pred ccc----------cCCChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 184 LVF----------HGLGDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 184 ~vl----------h~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
--- |+-.. ...++...++|++ ||+++++-..
T Consensus 262 ~G~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~---~G~iv~~G~~ 302 (398)
T 1kol_A 262 VGFEARGHGHEGAKHEAP---ATVLNSLMQVTRV---AGKIGIPGLY 302 (398)
T ss_dssp CCTTCBCSSTTGGGSBCT---THHHHHHHHHEEE---EEEEEECSCC
T ss_pred CCCcccccccccccccch---HHHHHHHHHHHhc---CCEEEEeccc
Confidence 431 21111 1357888899999 7998876543
No 349
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=71.69 E-value=4.7 Score=32.16 Aligned_cols=64 Identities=17% Similarity=0.136 Sum_probs=41.0
Q ss_pred CCCeEEEEcCCccHHHHH--HHHHCCCCeEEEeec--hHHHhcCCCCCCeEEEEcCCCC-CCCCceEEEec
Q 023384 118 GLGSLVDVGGGNGSLSRI--ISEAFPGIKCTVLDL--PHVVANLPEADNLKYIAGDMFQ-FIPPADAFLFK 183 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~--l~~~~p~~~~~~~D~--~~~~~~a~~~~rv~~~~~d~~~-~~p~~D~v~~~ 183 (283)
...+||=||||.-..... |++. +.++++++. .+.+....+..+++++..++.. ++.++|+|+..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~--GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaA 98 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQE--GAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVA 98 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGG--CCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEEC
Confidence 457899999986554443 3333 567777764 2222222224678888888876 67789999875
No 350
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=71.59 E-value=26 Score=25.42 Aligned_cols=85 Identities=18% Similarity=0.130 Sum_probs=48.8
Q ss_pred CCCCeEEEEcCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCC-C------CCCceEEEeccccc
Q 023384 117 EGLGSLVDVGGGN-GSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQ-F------IPPADAFLFKLVFH 187 (283)
Q Consensus 117 ~~~~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~-~------~p~~D~v~~~~vlh 187 (283)
....+|+=+|+|. |......+.+. +.+++++|. ++.++.+++...+.++.+|..+ + ..++|+++..-
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~--- 92 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFT--- 92 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECS---
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEe---
Confidence 3457899998753 33333333333 468999998 6767666522345567777654 1 22488888754
Q ss_pred CCChhHHHHHHHHHHHhhcc
Q 023384 188 GLGDEDGLKILKKRRAAIAS 207 (283)
Q Consensus 188 ~~~d~~~~~iL~~~~~~L~p 207 (283)
+++.....+..+.+.+.+
T Consensus 93 --~~~~~~~~~~~~~~~~~~ 110 (155)
T 2g1u_A 93 --NDDSTNFFISMNARYMFN 110 (155)
T ss_dssp --SCHHHHHHHHHHHHHTSC
T ss_pred --CCcHHHHHHHHHHHHHCC
Confidence 233333344444454454
No 351
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=70.66 E-value=24 Score=29.69 Aligned_cols=91 Identities=12% Similarity=0.145 Sum_probs=57.0
Q ss_pred cCCCCeEEEEcCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEc----CCCCC----C-----CCceE
Q 023384 116 FEGLGSLVDVGGGN-GSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAG----DMFQF----I-----PPADA 179 (283)
Q Consensus 116 ~~~~~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~----d~~~~----~-----p~~D~ 179 (283)
.....+||-+|+|. |..+..+++.. +.++++.|. ++..+.+++ ... .++.. |+.+. . ..+|+
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~-~~~~~~~~~~~~~~i~~~~~~~~g~g~D~ 243 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNCGAD-VTLVVDPAKEEESSIIERIRSAIGDLPNV 243 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCS-EEEECCTTTSCHHHHHHHHHHHSSSCCSE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhCCC-EEEcCcccccHHHHHHHHhccccCCCCCE
Confidence 56678999999764 78888888876 567888887 655555443 111 12221 11111 1 24888
Q ss_pred EEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 180 FLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 180 v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
++-..- .+ ..++...++|++ +|+++++-.
T Consensus 244 vid~~g-----~~---~~~~~~~~~l~~---~G~iv~~G~ 272 (352)
T 1e3j_A 244 TIDCSG-----NE---KCITIGINITRT---GGTLMLVGM 272 (352)
T ss_dssp EEECSC-----CH---HHHHHHHHHSCT---TCEEEECSC
T ss_pred EEECCC-----CH---HHHHHHHHHHhc---CCEEEEEec
Confidence 875432 11 346778889999 799888754
No 352
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=70.42 E-value=2.1 Score=36.80 Aligned_cols=90 Identities=17% Similarity=0.175 Sum_probs=57.3
Q ss_pred CCCeEEEEc--CCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEc--CCCC---CC--CCceEEEeccccc
Q 023384 118 GLGSLVDVG--GGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAG--DMFQ---FI--PPADAFLFKLVFH 187 (283)
Q Consensus 118 ~~~~vlDvG--gG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~--d~~~---~~--p~~D~v~~~~vlh 187 (283)
...+||=+| |+.|.++..+++.....++++.|. ++..+.+++..--.++.. |+.+ .. ..+|+++-+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~--- 247 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTT--- 247 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEECS---
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEECC---
Confidence 456899888 567889999998766789999998 665555543111111111 1111 11 1488877633
Q ss_pred CCChhHHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 188 GLGDEDGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 188 ~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
.. ...++.+.++|++ +|+++++.
T Consensus 248 --g~---~~~~~~~~~~l~~---~G~iv~~g 270 (363)
T 4dvj_A 248 --HT---DKHAAEIADLIAP---QGRFCLID 270 (363)
T ss_dssp --CH---HHHHHHHHHHSCT---TCEEEECS
T ss_pred --Cc---hhhHHHHHHHhcC---CCEEEEEC
Confidence 22 2457888899999 79998873
No 353
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=70.03 E-value=1.3 Score=38.18 Aligned_cols=91 Identities=12% Similarity=0.117 Sum_probs=56.6
Q ss_pred cCCCCeEEEEcCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEc---CCCCCC-CCceEEEecccccC
Q 023384 116 FEGLGSLVDVGGGN-GSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAG---DMFQFI-PPADAFLFKLVFHG 188 (283)
Q Consensus 116 ~~~~~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~---d~~~~~-p~~D~v~~~~vlh~ 188 (283)
.....+||-+|+|. |..+..+++.. +.++++.|. ++..+.+++ ... .++.. |+.+.. ..+|+++-..--
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~lGa~-~vi~~~~~~~~~~~~~g~Dvvid~~g~-- 267 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKALGAD-EVVNSRNADEMAAHLKSFDFILNTVAA-- 267 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTCS-EEEETTCHHHHHTTTTCEEEEEECCSS--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCc-EEeccccHHHHHHhhcCCCEEEECCCC--
Confidence 56678999999874 88888888876 668888886 555555443 111 11211 111112 358988764321
Q ss_pred CChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 189 LGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 189 ~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
+ ..++...+.|++ +|+++++-.
T Consensus 268 ---~---~~~~~~~~~l~~---~G~iv~~G~ 289 (369)
T 1uuf_A 268 ---P---HNLDDFTTLLKR---DGTMTLVGA 289 (369)
T ss_dssp ---C---CCHHHHHTTEEE---EEEEEECCC
T ss_pred ---H---HHHHHHHHHhcc---CCEEEEecc
Confidence 1 235677789999 798887654
No 354
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=69.68 E-value=13 Score=32.55 Aligned_cols=88 Identities=19% Similarity=0.271 Sum_probs=53.9
Q ss_pred CeEEEEcCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCC-------CCCceEEEecccccCCC
Q 023384 120 GSLVDVGGGN-GSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQF-------IPPADAFLFKLVFHGLG 190 (283)
Q Consensus 120 ~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~-------~p~~D~v~~~~vlh~~~ 190 (283)
.+|+=+|+|. |......+.+ .+..++++|. ++.++.+++ ..+.++.||..++ +..+|++++.-- +
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~-~g~~vvvId~d~~~v~~~~~-~g~~vi~GDat~~~~L~~agi~~A~~viv~~~----~ 78 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLS-SGVKMVVLDHDPDHIETLRK-FGMKVFYGDATRMDLLESAGAAKAEVLINAID----D 78 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-TTCCEEEEECCHHHHHHHHH-TTCCCEESCTTCHHHHHHTTTTTCSEEEECCS----S
T ss_pred CeEEEECCCHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHh-CCCeEEEcCCCCHHHHHhcCCCccCEEEECCC----C
Confidence 5688888754 3333333333 3678999999 777776653 3567889998873 235888877431 2
Q ss_pred hhHHHHHHHHHHHhhccCCCCcEEEEE
Q 023384 191 DEDGLKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 191 d~~~~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
++.... +....+.+.| ..++++.
T Consensus 79 ~~~n~~-i~~~ar~~~p---~~~Iiar 101 (413)
T 3l9w_A 79 PQTNLQ-LTEMVKEHFP---HLQIIAR 101 (413)
T ss_dssp HHHHHH-HHHHHHHHCT---TCEEEEE
T ss_pred hHHHHH-HHHHHHHhCC---CCeEEEE
Confidence 344444 4445556677 3566554
No 355
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=69.65 E-value=15 Score=32.97 Aligned_cols=122 Identities=14% Similarity=0.111 Sum_probs=72.7
Q ss_pred CCeEEEEcCCccHHHHHHHHHCCCCe-EEEeec-hHHHhcCCC----CCCeEEEEcCCCC-C------------------
Q 023384 119 LGSLVDVGGGNGSLSRIISEAFPGIK-CTVLDL-PHVVANLPE----ADNLKYIAGDMFQ-F------------------ 173 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~p~~~-~~~~D~-~~~~~~a~~----~~rv~~~~~d~~~-~------------------ 173 (283)
.-+++|+=||.|.++..+.++ +.+ +..+|+ +..++.-+. .....++.+|+.+ .
T Consensus 88 ~~~viDLFaG~GGlslG~~~a--G~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~ 165 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI--GGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIRQ 165 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT--TEEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhHHhhhhh
Confidence 358999999999999999876 445 467787 544432211 1334556677754 2
Q ss_pred -CCCceEEEecccccCCChhH-----------------HHHHHHH---HHHhhccCCCCcEEEEEeeecCCCccchhhhh
Q 023384 174 -IPPADAFLFKLVFHGLGDED-----------------GLKILKK---RRAAIASNGERGKVIIIDIVINAEEEEHELTE 232 (283)
Q Consensus 174 -~p~~D~v~~~~vlh~~~d~~-----------------~~~iL~~---~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~ 232 (283)
.|.+|+++...-...|+-.- .-.++.. +.+.++| +++++|.+..=...
T Consensus 166 ~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~riI~~~rP-----k~fvlENV~gl~s~------ 234 (482)
T 3me5_A 166 HIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRP-----AMFVLENVKNLKSH------ 234 (482)
T ss_dssp HSCCCSEEEEECCCCCC------------------CTTTTSHHHHHHHHHHHHCC-----SEEEEEEETTTTTG------
T ss_pred cCCCCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHHHHHHcCC-----cEEEEeCcHHHhcc------
Confidence 24689998877666665211 0113333 4445566 67888876632110
Q ss_pred hhhhcccccccccCCccCCHHHHHHHHHHCCCCee
Q 023384 233 TKFLFDIVMSVNATGKERTESEWAKLFFDACFSHY 267 (283)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 267 (283)
.+..+.+.+.+.|++.|+.+.
T Consensus 235 --------------~~g~~f~~i~~~L~~lGY~v~ 255 (482)
T 3me5_A 235 --------------DKGKTFRIIMQTLDELGYDVA 255 (482)
T ss_dssp --------------GGGHHHHHHHHHHHHTTEEET
T ss_pred --------------cCCcHHHHHHHHHhcCCcEEE
Confidence 111245678888999998764
No 356
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=68.99 E-value=5.4 Score=33.82 Aligned_cols=93 Identities=20% Similarity=0.238 Sum_probs=57.4
Q ss_pred cCCCCeEEEEcCC--ccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEcC--C----CCCC--CCceEEEec
Q 023384 116 FEGLGSLVDVGGG--NGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAGD--M----FQFI--PPADAFLFK 183 (283)
Q Consensus 116 ~~~~~~vlDvGgG--~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d--~----~~~~--p~~D~v~~~ 183 (283)
.....+||-+|+| .|..+..+++...+.++++.|. ++..+.+++ .....+-..+ . .+-. ..+|+++-.
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 247 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDL 247 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCceEEEEC
Confidence 5667899999987 6777777887764678999997 555554433 2111111111 1 0001 247887754
Q ss_pred ccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 184 LVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 184 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
.- . ...++...+.|++ +|+++++-.
T Consensus 248 ~g-----~---~~~~~~~~~~l~~---~G~iv~~g~ 272 (347)
T 1jvb_A 248 NN-----S---EKTLSVYPKALAK---QGKYVMVGL 272 (347)
T ss_dssp CC-----C---HHHHTTGGGGEEE---EEEEEECCS
T ss_pred CC-----C---HHHHHHHHHHHhc---CCEEEEECC
Confidence 32 1 1357788889999 798887654
No 357
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=68.79 E-value=12 Score=30.37 Aligned_cols=79 Identities=15% Similarity=0.070 Sum_probs=44.8
Q ss_pred eEEEEcCCc-cH-HHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCCCCCceEEEecccccCCChhHHHHH
Q 023384 121 SLVDVGGGN-GS-LSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLGDEDGLKI 197 (283)
Q Consensus 121 ~vlDvGgG~-G~-~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~~~~i 197 (283)
+|.=||+|. |. ++..+++. +.+++++|. ++.++.+.+..-......|..+- .++|+|++.- ++.....+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av-----~~~~~~~~ 73 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR--GHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCT-----PIQLILPT 73 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECS-----CHHHHHHH
T ss_pred EEEEEcCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEEC-----CHHHHHHH
Confidence 567788764 22 22233332 458889998 66554433211110112233223 4689998854 55566788
Q ss_pred HHHHHHhhcc
Q 023384 198 LKKRRAAIAS 207 (283)
Q Consensus 198 L~~~~~~L~p 207 (283)
++.+.+.++|
T Consensus 74 ~~~l~~~~~~ 83 (279)
T 2f1k_A 74 LEKLIPHLSP 83 (279)
T ss_dssp HHHHGGGSCT
T ss_pred HHHHHhhCCC
Confidence 8888888887
No 358
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=68.51 E-value=15 Score=29.93 Aligned_cols=83 Identities=13% Similarity=0.069 Sum_probs=47.2
Q ss_pred CeEEEEcCCc-cHH-HHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCCCC-CceEEEecccccCCChhHHH
Q 023384 120 GSLVDVGGGN-GSL-SRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQFIP-PADAFLFKLVFHGLGDEDGL 195 (283)
Q Consensus 120 ~~vlDvGgG~-G~~-~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~~p-~~D~v~~~~vlh~~~d~~~~ 195 (283)
.+|.=||+|. |.. +..+.+.....++++.|. ++.++.+++..-......|..+... .+|+|++.- +.....
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilav-----p~~~~~ 76 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSS-----PVRTFR 76 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECS-----CHHHHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcC-----CHHHHH
Confidence 3677788764 332 223333322237899998 6655544321111111223333345 689998853 556667
Q ss_pred HHHHHHHHhhcc
Q 023384 196 KILKKRRAAIAS 207 (283)
Q Consensus 196 ~iL~~~~~~L~p 207 (283)
.+++.+.+.+++
T Consensus 77 ~v~~~l~~~l~~ 88 (281)
T 2g5c_A 77 EIAKKLSYILSE 88 (281)
T ss_dssp HHHHHHHHHSCT
T ss_pred HHHHHHHhhCCC
Confidence 888888888988
No 359
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=68.02 E-value=15 Score=32.90 Aligned_cols=97 Identities=19% Similarity=0.225 Sum_probs=57.6
Q ss_pred CeEEEEcCCccH--HHHHHHHHCCCCeEEEeec-hHHHhcCCCC------------------CCeEEEEcCCCCCCCCce
Q 023384 120 GSLVDVGGGNGS--LSRIISEAFPGIKCTVLDL-PHVVANLPEA------------------DNLKYIAGDMFQFIPPAD 178 (283)
Q Consensus 120 ~~vlDvGgG~G~--~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------------------~rv~~~~~d~~~~~p~~D 178 (283)
.+|.=||+|.=. ++..|+++.++.+++++|+ ++.++..++. .++.+ ..|..+....+|
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~-t~~~~~~~~~aD 88 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFF-SSDIPKAIAEAD 88 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHHHCS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHhhcCC
Confidence 579999988533 3445666666789999998 7766655431 12222 112111123479
Q ss_pred EEEecc--cccC--------CChhHHHHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 179 AFLFKL--VFHG--------LGDEDGLKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 179 ~v~~~~--vlh~--------~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
+|+++- ..+. .+-.....+++.+.+.+++ |.++|.....
T Consensus 89 vvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~----g~iVV~~STv 137 (481)
T 2o3j_A 89 LIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGG----PKIVVEKSTV 137 (481)
T ss_dssp EEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCS----CEEEEECSCC
T ss_pred EEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCC----CCEEEECCCC
Confidence 988863 2221 1112366778889999998 6777765433
No 360
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=67.80 E-value=24 Score=29.22 Aligned_cols=105 Identities=9% Similarity=0.004 Sum_probs=63.2
Q ss_pred cCCCCeEEEEcCCccHHHHHHHHHCCCCe-EEEeec-hHHHhcCCC-CCCeEEEEcCCCC-C---C---CCceEEEeccc
Q 023384 116 FEGLGSLVDVGGGNGSLSRIISEAFPGIK-CTVLDL-PHVVANLPE-ADNLKYIAGDMFQ-F---I---PPADAFLFKLV 185 (283)
Q Consensus 116 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~-~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~-~---~---p~~D~v~~~~v 185 (283)
.+...+++|+=||.|.++..+.++.-.+. +..+|+ +...+..+. -....+..+|+.+ . + +.+|+++..--
T Consensus 13 ~~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~ggpP 92 (295)
T 2qrv_A 13 KRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGGSP 92 (295)
T ss_dssp CCCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEECCC
T ss_pred cCCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEecCC
Confidence 34556899999999999999998743443 478888 544432221 2334577888876 2 2 25899988643
Q ss_pred ccCCC----------hhH--HHHHHHHHHHhhccCCCCcE----EEEEeeecC
Q 023384 186 FHGLG----------DED--GLKILKKRRAAIASNGERGK----VIIIDIVIN 222 (283)
Q Consensus 186 lh~~~----------d~~--~~~iL~~~~~~L~p~~~gg~----lli~d~~~~ 222 (283)
...|+ |+. ...-+-++.+.++|+ .|. ++++|.+..
T Consensus 93 CQ~fS~ag~~r~g~~d~r~~L~~~~~rii~~~~P~--~~~~~P~~~l~ENV~g 143 (295)
T 2qrv_A 93 CNDLSIVNPARKGLYEGTGRLFFEFYRLLHDARPK--EGDDRPFFWLFENVVA 143 (295)
T ss_dssp CGGGBTTCTTCCTTTSTTTTHHHHHHHHHHHHSCC--TTCCCCCEEEEEEESS
T ss_pred CccccccCccccccccccchhHHHHHHHHHHhCcc--cccCCccEEEEEcCcc
Confidence 33332 221 222233455566771 122 889998764
No 361
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=67.56 E-value=55 Score=27.54 Aligned_cols=93 Identities=14% Similarity=0.063 Sum_probs=57.4
Q ss_pred cCCCCeEEEEcCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEcC------CCCC----C-C-CceEE
Q 023384 116 FEGLGSLVDVGGGN-GSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAGD------MFQF----I-P-PADAF 180 (283)
Q Consensus 116 ~~~~~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d------~~~~----~-p-~~D~v 180 (283)
.....+||-+|+|. |.++..+++..-.-++++.|. ++..+.+++ .+.+-....| +.+. . + .+|++
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvv 256 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVA 256 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEE
Confidence 56678888898764 888888888864334888886 555554433 2222212211 1110 1 2 48888
Q ss_pred EecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 181 LFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 181 ~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
+-..- .+ ..++...+.|++ ||+++++-.
T Consensus 257 id~~g-----~~---~~~~~~~~~l~~---~G~iv~~G~ 284 (363)
T 3m6i_A 257 LECTG-----VE---SSIAAAIWAVKF---GGKVFVIGV 284 (363)
T ss_dssp EECSC-----CH---HHHHHHHHHSCT---TCEEEECCC
T ss_pred EECCC-----Ch---HHHHHHHHHhcC---CCEEEEEcc
Confidence 76432 21 357788889999 799888764
No 362
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=67.30 E-value=28 Score=25.98 Aligned_cols=87 Identities=10% Similarity=0.148 Sum_probs=48.4
Q ss_pred CCeEEEEcCCccHHHHHHHHHC--C-CCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCC--------CCCceEEEecccc
Q 023384 119 LGSLVDVGGGNGSLSRIISEAF--P-GIKCTVLDL-PHVVANLPEADNLKYIAGDMFQF--------IPPADAFLFKLVF 186 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~--p-~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~--------~p~~D~v~~~~vl 186 (283)
..+|+=+|+| ..+..+++.. . +.+++++|. ++.++.+++ ..+.++.+|..++ ..++|+++...-
T Consensus 39 ~~~v~IiG~G--~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~- 114 (183)
T 3c85_A 39 HAQVLILGMG--RIGTGAYDELRARYGKISLGIEIREEAAQQHRS-EGRNVISGDATDPDFWERILDTGHVKLVLLAMP- 114 (183)
T ss_dssp TCSEEEECCS--HHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-TTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS-
T ss_pred CCcEEEECCC--HHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-CCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC-
Confidence 3578888875 4443333322 2 567999998 666555442 2456677777541 235888887431
Q ss_pred cCCChhHHHHHHHHHHHhhccCCCCcEEEE
Q 023384 187 HGLGDEDGLKILKKRRAAIASNGERGKVII 216 (283)
Q Consensus 187 h~~~d~~~~~iL~~~~~~L~p~~~gg~lli 216 (283)
+++....++. ..+.+.| ...++.
T Consensus 115 ---~~~~~~~~~~-~~~~~~~---~~~ii~ 137 (183)
T 3c85_A 115 ---HHQGNQTALE-QLQRRNY---KGQIAA 137 (183)
T ss_dssp ---SHHHHHHHHH-HHHHTTC---CSEEEE
T ss_pred ---ChHHHHHHHH-HHHHHCC---CCEEEE
Confidence 2333334333 4445565 355554
No 363
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=66.71 E-value=10 Score=33.59 Aligned_cols=96 Identities=18% Similarity=0.193 Sum_probs=53.3
Q ss_pred CeEEEEcCCccHHHH--HHHHHCCCCeEEEeec-hHHHhcCCC-------------------CCCeEEEEcCCCCCCCCc
Q 023384 120 GSLVDVGGGNGSLSR--IISEAFPGIKCTVLDL-PHVVANLPE-------------------ADNLKYIAGDMFQFIPPA 177 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~--~l~~~~p~~~~~~~D~-~~~~~~a~~-------------------~~rv~~~~~d~~~~~p~~ 177 (283)
.+|.=||+|.=.... .++++ +.+++++|+ ++.++..++ ..++.+. .|..+....+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~--G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t-~d~~ea~~~a 79 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL--GANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFG-TEIEQAVPEA 79 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEE-SCHHHHGGGC
T ss_pred CEEEEECcCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEE-CCHHHHHhcC
Confidence 467778776432222 23332 568999999 665544322 1233322 2222223458
Q ss_pred eEEEecccccC-----CChhHHHHHHHHHHHhhccCCCCcEEEEEeeecC
Q 023384 178 DAFLFKLVFHG-----LGDEDGLKILKKRRAAIASNGERGKVIIIDIVIN 222 (283)
Q Consensus 178 D~v~~~~vlh~-----~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~ 222 (283)
|+|+++---.. .+-.....+++.+.+.|++ |.++|.....+
T Consensus 80 DvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~----g~iVV~~STv~ 125 (450)
T 3gg2_A 80 DIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSR----YILIVTKSTVP 125 (450)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCS----CEEEEECSCCC
T ss_pred CEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCC----CCEEEEeeeCC
Confidence 98887542110 0111567888999999998 77777765443
No 364
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=66.57 E-value=13 Score=32.72 Aligned_cols=97 Identities=19% Similarity=0.126 Sum_probs=55.3
Q ss_pred CCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCC-----------------CCeEEEEcCCCCCCCCceEE
Q 023384 119 LGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPEA-----------------DNLKYIAGDMFQFIPPADAF 180 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----------------~rv~~~~~d~~~~~p~~D~v 180 (283)
..+|.=||+|.=....+.+-+- +.+++++|+ ++.++..++. .++.+ ..|..+....+|+|
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~-ttd~~ea~~~aDvV 113 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRA-TTDKHDAYRNADYV 113 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE-ESCHHHHHTTCSEE
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEE-EcCHHHHHhCCCEE
Confidence 3578888887544443333333 678999999 7766554331 13332 22322223458998
Q ss_pred EecccccC-----CCh-hHHHHHHHHHHHhhccCCCCcEEEEEeeecC
Q 023384 181 LFKLVFHG-----LGD-EDGLKILKKRRAAIASNGERGKVIIIDIVIN 222 (283)
Q Consensus 181 ~~~~vlh~-----~~d-~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~ 222 (283)
++.-.-.. -+| .....+++.+.+ |+| |.++|.....+
T Consensus 114 iiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~----g~iVV~~STv~ 156 (432)
T 3pid_A 114 IIATPTDYDPKTNYFNTSTVEAVIRDVTE-INP----NAVMIIKSTIP 156 (432)
T ss_dssp EECCCCEEETTTTEEECHHHHHHHHHHHH-HCT----TSEEEECSCCC
T ss_pred EEeCCCccccccccccHHHHHHHHHHHHh-cCC----CcEEEEeCCCC
Confidence 88632210 001 246677888888 998 66666665444
No 365
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=66.49 E-value=19 Score=30.55 Aligned_cols=92 Identities=15% Similarity=0.150 Sum_probs=58.9
Q ss_pred cCCCCeEEEEc--CCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcC---CCCC----CC-CceEEEecc
Q 023384 116 FEGLGSLVDVG--GGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGD---MFQF----IP-PADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvG--gG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d---~~~~----~p-~~D~v~~~~ 184 (283)
.....+||-+| ||.|..+..+++.. +.++++.|. ++..+.+++..--.++..+ +.+. .+ .+|+++-..
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~ 239 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESV 239 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECC
Confidence 56678999999 67899999999886 568999987 5555544431111122211 1000 11 478887643
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
- . ..++.+.++|++ +|+++++-..
T Consensus 240 g-----~----~~~~~~~~~l~~---~G~iv~~g~~ 263 (362)
T 2c0c_A 240 G-----G----AMFDLAVDALAT---KGRLIVIGFI 263 (362)
T ss_dssp C-----T----HHHHHHHHHEEE---EEEEEECCCG
T ss_pred C-----H----HHHHHHHHHHhc---CCEEEEEeCC
Confidence 2 1 357788899999 7988877654
No 366
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=66.40 E-value=16 Score=31.25 Aligned_cols=94 Identities=12% Similarity=0.133 Sum_probs=57.3
Q ss_pred cCCCCeEEEEcCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcC-----CCCCC-----CCceEEEec
Q 023384 116 FEGLGSLVDVGGGN-GSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGD-----MFQFI-----PPADAFLFK 183 (283)
Q Consensus 116 ~~~~~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d-----~~~~~-----p~~D~v~~~ 183 (283)
.....+||-+|+|. |..+..+++..-..++++.|. ++..+.+++..--.++..+ +.+.+ ..+|+++-.
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~ 269 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLEC 269 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEEC
Confidence 55668899999764 788888888864337889986 6555554431111122111 11100 147888754
Q ss_pred ccccCCChhHHHHHHHHHHHhhccCCCC-cEEEEEeee
Q 023384 184 LVFHGLGDEDGLKILKKRRAAIASNGER-GKVIIIDIV 220 (283)
Q Consensus 184 ~vlh~~~d~~~~~iL~~~~~~L~p~~~g-g~lli~d~~ 220 (283)
-- . ...++...++|++ + |+++++-..
T Consensus 270 ~g-----~---~~~~~~~~~~l~~---~~G~iv~~G~~ 296 (374)
T 1cdo_A 270 VG-----N---VGVMRNALESCLK---GWGVSVLVGWT 296 (374)
T ss_dssp SC-----C---HHHHHHHHHTBCT---TTCEEEECSCC
T ss_pred CC-----C---HHHHHHHHHHhhc---CCcEEEEEcCC
Confidence 32 1 1457788899999 8 998877543
No 367
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=66.36 E-value=13 Score=31.65 Aligned_cols=92 Identities=17% Similarity=0.116 Sum_probs=58.4
Q ss_pred cCCCCeEEEEcCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEcCCCC---CC----C--CceEEEec
Q 023384 116 FEGLGSLVDVGGGN-GSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAGDMFQ---FI----P--PADAFLFK 183 (283)
Q Consensus 116 ~~~~~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~---~~----p--~~D~v~~~ 183 (283)
+....+||-+|+|. |..+..+++.. +.++++.|. ++..+.+++ ... .++..+-.+ .+ + .+|+++-.
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~-~vi~~~~~~~~~~v~~~~~g~g~D~vid~ 264 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFALGAD-HGINRLEEDWVERVYALTGDRGADHILEI 264 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTCS-EEEETTTSCHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHHcCCC-EEEcCCcccHHHHHHHHhCCCCceEEEEC
Confidence 55678999999764 78888888876 569999997 666665544 211 122221111 00 1 48888764
Q ss_pred ccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 184 LVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 184 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
.- . ..++...++|+| +|+++++....
T Consensus 265 ~g-----~----~~~~~~~~~l~~---~G~iv~~G~~~ 290 (363)
T 3uog_A 265 AG-----G----AGLGQSLKAVAP---DGRISVIGVLE 290 (363)
T ss_dssp TT-----S----SCHHHHHHHEEE---EEEEEEECCCS
T ss_pred CC-----h----HHHHHHHHHhhc---CCEEEEEecCC
Confidence 42 1 236677889999 79998886543
No 368
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=66.31 E-value=8.5 Score=31.56 Aligned_cols=83 Identities=18% Similarity=0.304 Sum_probs=48.3
Q ss_pred CeEEEEcC-Cc-cHH-HHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCCCCCceEEEecccccCCChhHHH
Q 023384 120 GSLVDVGG-GN-GSL-SRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLGDEDGL 195 (283)
Q Consensus 120 ~~vlDvGg-G~-G~~-~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~~~ 195 (283)
.+|.=||+ |. |.. +..+++. +.++++.|. ++..+.+.+. .+.. .+..+....+|+|++.- ++....
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~-g~~~--~~~~~~~~~aDvVi~av-----~~~~~~ 81 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS--AHHLAAIEIAPEGRDRLQGM-GIPL--TDGDGWIDEADVVVLAL-----PDNIIE 81 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS--SSEEEEECCSHHHHHHHHHT-TCCC--CCSSGGGGTCSEEEECS-----CHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHhc-CCCc--CCHHHHhcCCCEEEEcC-----CchHHH
Confidence 47888887 63 322 2233332 468889998 5555443321 1221 12222234589998854 555677
Q ss_pred HHHHHHHHhhccCCCCcEEEE
Q 023384 196 KILKKRRAAIASNGERGKVII 216 (283)
Q Consensus 196 ~iL~~~~~~L~p~~~gg~lli 216 (283)
.+++.+.+.++| +.+++
T Consensus 82 ~v~~~l~~~l~~----~~ivv 98 (286)
T 3c24_A 82 KVAEDIVPRVRP----GTIVL 98 (286)
T ss_dssp HHHHHHGGGSCT----TCEEE
T ss_pred HHHHHHHHhCCC----CCEEE
Confidence 888888888887 55554
No 369
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=65.93 E-value=22 Score=29.90 Aligned_cols=97 Identities=19% Similarity=0.145 Sum_probs=54.8
Q ss_pred CeEEEEcCCccHHHHHHHHHC----CCCeEEEeec-hH-------HHhcCC-----CCCCeEEEEcCCCCC-------CC
Q 023384 120 GSLVDVGGGNGSLSRIISEAF----PGIKCTVLDL-PH-------VVANLP-----EADNLKYIAGDMFQF-------IP 175 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~----p~~~~~~~D~-~~-------~~~~a~-----~~~rv~~~~~d~~~~-------~p 175 (283)
.+||=.| |+|..+..+++++ .+.+++++|. +. ..+... ...++.++.+|+.++ ..
T Consensus 11 ~~vlVTG-atG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 89 (362)
T 3sxp_A 11 QTILITG-GAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKL 89 (362)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTS
T ss_pred CEEEEEC-CCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhcc
Confidence 5677665 6777777766554 5788999987 32 111111 145789999999872 23
Q ss_pred CceEEEecccccCCChhH-------HHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 176 PADAFLFKLVFHGLGDED-------GLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 176 ~~D~v~~~~vlh~~~d~~-------~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
+.|+|+-.......+.++ .+.-..++.++++.. +++++.+..
T Consensus 90 ~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~--~~~~V~~SS 138 (362)
T 3sxp_A 90 HFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK--KAKVIYASS 138 (362)
T ss_dssp CCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHT--TCEEEEEEE
T ss_pred CCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHc--CCcEEEeCc
Confidence 578887665543322111 112234555555541 467555554
No 370
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=65.63 E-value=21 Score=29.91 Aligned_cols=90 Identities=12% Similarity=0.105 Sum_probs=57.5
Q ss_pred cCCCCeEEEEcCC-ccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCC-CC--------CCceEEEecc
Q 023384 116 FEGLGSLVDVGGG-NGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQ-FI--------PPADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG-~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~-~~--------p~~D~v~~~~ 184 (283)
.....+||-+|+| .|..+..+++.. +.++++.|. ++..+.+++..--.+ .|..+ ++ ..+|+++-..
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~--~d~~~~~~~~~~~~~~~~~d~vid~~ 238 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKELGADLV--VNPLKEDAAKFMKEKVGGVHAAVVTA 238 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCSEE--ECTTTSCHHHHHHHHHSSEEEEEESS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHCCCCEE--ecCCCccHHHHHHHHhCCCCEEEECC
Confidence 5667899999865 588888888876 469999997 655555443111111 13322 11 2478887643
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
- . ...++...++|++ +|+++++..
T Consensus 239 g-----~---~~~~~~~~~~l~~---~G~~v~~g~ 262 (339)
T 1rjw_A 239 V-----S---KPAFQSAYNSIRR---GGACVLVGL 262 (339)
T ss_dssp C-----C---HHHHHHHHHHEEE---EEEEEECCC
T ss_pred C-----C---HHHHHHHHHHhhc---CCEEEEecc
Confidence 2 1 1357788899999 788887654
No 371
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=65.16 E-value=5.9 Score=33.64 Aligned_cols=94 Identities=12% Similarity=0.048 Sum_probs=58.5
Q ss_pred cCCCCeEEEEcCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEc---CCCCC----CC--CceEEEec
Q 023384 116 FEGLGSLVDVGGGN-GSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAG---DMFQF----IP--PADAFLFK 183 (283)
Q Consensus 116 ~~~~~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~---d~~~~----~p--~~D~v~~~ 183 (283)
.....+||-+|+|. |.++..+++..-..++++.|. ++..+.+++ ... .++.. |+.+. .+ .+|+++-.
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~-~vi~~~~~~~~~~v~~~t~g~g~D~v~d~ 242 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGAT-DIINYKNGDIVEQILKATDGKGVDKVVIA 242 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCC-EEECGGGSCHHHHHHHHTTTCCEEEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCc-eEEcCCCcCHHHHHHHHcCCCCCCEEEEC
Confidence 56678899998765 778888887654337999998 655665554 111 12211 11111 11 48988753
Q ss_pred ccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 184 LVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 184 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
.- .+ ..++...+.|+| ||+++++-...
T Consensus 243 ~g-----~~---~~~~~~~~~l~~---~G~~v~~G~~~ 269 (352)
T 3fpc_A 243 GG-----DV---HTFAQAVKMIKP---GSDIGNVNYLG 269 (352)
T ss_dssp SS-----CT---THHHHHHHHEEE---EEEEEECCCCC
T ss_pred CC-----Ch---HHHHHHHHHHhc---CCEEEEecccC
Confidence 32 11 347788889999 79988876443
No 372
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=65.02 E-value=8.8 Score=31.80 Aligned_cols=54 Identities=13% Similarity=0.255 Sum_probs=34.3
Q ss_pred CCeEEEEcCCCC--C-CC--CceEEEecccccCC---Ch---------------hHHHHHHHHHHHhhccCCCCcEEEEE
Q 023384 161 DNLKYIAGDMFQ--F-IP--PADAFLFKLVFHGL---GD---------------EDGLKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 161 ~rv~~~~~d~~~--~-~p--~~D~v~~~~vlh~~---~d---------------~~~~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
.+++++.+|.++ . ++ .+|+|++.=-.+.. .+ .....+++.++++|+| ||.+++.
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~---~G~l~i~ 96 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVP---GGRLVIV 96 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEE
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCC---CcEEEEE
Confidence 467788888876 2 34 48988885443211 10 1134678899999999 6777664
No 373
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=64.29 E-value=44 Score=26.71 Aligned_cols=94 Identities=14% Similarity=0.122 Sum_probs=53.4
Q ss_pred EEEEcCCccHHHHHHHHHCC----CCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCC------CCCceEEEecccccCCC
Q 023384 122 LVDVGGGNGSLSRIISEAFP----GIKCTVLDL-PHVVANLPEADNLKYIAGDMFQF------IPPADAFLFKLVFHGLG 190 (283)
Q Consensus 122 vlDvGgG~G~~~~~l~~~~p----~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~------~p~~D~v~~~~vlh~~~ 190 (283)
|| |=||+|..+..+++.+- +.++++++. ++...... ..+++++.+|+.++ +.+.|+++.....+ +.
T Consensus 3 il-VtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~-~~ 79 (287)
T 2jl1_A 3 IA-VTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA-DQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPH-YD 79 (287)
T ss_dssp EE-ETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH-HTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCC-SC
T ss_pred EE-EEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh-hcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCC-cC
Confidence 44 34678888888777652 567888887 32211111 24688999999873 23578887655432 22
Q ss_pred hhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 191 DEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 191 d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
++......+++.++++..+ -++++.+..
T Consensus 80 ~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss 107 (287)
T 2jl1_A 80 NTLLIVQHANVVKAARDAG-VKHIAYTGY 107 (287)
T ss_dssp HHHHHHHHHHHHHHHHHTT-CSEEEEEEE
T ss_pred chHHHHHHHHHHHHHHHcC-CCEEEEECC
Confidence 2213344555666655411 246666654
No 374
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=64.26 E-value=48 Score=25.69 Aligned_cols=138 Identities=13% Similarity=0.079 Sum_probs=71.0
Q ss_pred CCeEEEEcCCccHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCe-EEEEcCCCCC----CCCceEEEecccccCCC
Q 023384 119 LGSLVDVGGGNGSLSRIISEAF--PGIKCTVLDL-PHVVANLPEADNL-KYIAGDMFQF----IPPADAFLFKLVFHGLG 190 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~rv-~~~~~d~~~~----~p~~D~v~~~~vlh~~~ 190 (283)
.++||=.| |+|..+.++++.+ .+.++++++. ++..+... ..++ .++.+|+.+. +.+.|+++.........
T Consensus 21 ~~~ilVtG-atG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~~~~ 98 (236)
T 3e8x_A 21 GMRVLVVG-ANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR-ERGASDIVVANLEEDFSHAFASIDAVVFAAGSGPHT 98 (236)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HTTCSEEEECCTTSCCGGGGTTCSEEEECCCCCTTS
T ss_pred CCeEEEEC-CCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH-hCCCceEEEcccHHHHHHHHcCCCEEEECCCCCCCC
Confidence 36777665 5666666665544 3568888887 44333322 2367 8899998742 33578888765443322
Q ss_pred hhH-H----HHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCC
Q 023384 191 DED-G----LKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFS 265 (283)
Q Consensus 191 d~~-~----~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 265 (283)
+.+ . ..-..++.++++..+ .++++.+........... . . .......+....++++++.|++
T Consensus 99 ~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~---~-------~---~~~~Y~~sK~~~e~~~~~~gi~ 164 (236)
T 3e8x_A 99 GADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVDPDQG---P-------M---NMRHYLVAKRLADDELKRSSLD 164 (236)
T ss_dssp CHHHHHHTTTHHHHHHHHHHHHHT-CCEEEEECCTTCSCGGGS---C-------G---GGHHHHHHHHHHHHHHHHSSSE
T ss_pred CccccchhhHHHHHHHHHHHHHcC-CCEEEEEecCCCCCCCCC---h-------h---hhhhHHHHHHHHHHHHHHCCCC
Confidence 211 1 111223333443311 367777665322211100 0 0 0001112344566778889988
Q ss_pred eeeEEEc
Q 023384 266 HYKITPI 272 (283)
Q Consensus 266 ~~~~~~~ 272 (283)
..-+++.
T Consensus 165 ~~~lrpg 171 (236)
T 3e8x_A 165 YTIVRPG 171 (236)
T ss_dssp EEEEEEC
T ss_pred EEEEeCC
Confidence 7766654
No 375
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=63.96 E-value=50 Score=25.73 Aligned_cols=93 Identities=19% Similarity=0.228 Sum_probs=54.7
Q ss_pred CeEEEEcCCccHHHHHHHHHCC--C-CeEEEeec-hHHHhcCCCCCCeEEEEcCCCCC------CCCceEEEecccccCC
Q 023384 120 GSLVDVGGGNGSLSRIISEAFP--G-IKCTVLDL-PHVVANLPEADNLKYIAGDMFQF------IPPADAFLFKLVFHGL 189 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~p--~-~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~------~p~~D~v~~~~vlh~~ 189 (283)
++||=. ||+|....++++.+- + .++++++. ++...... ..++.++.+|+.++ +...|+++.....
T Consensus 24 k~vlVt-GatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~--- 98 (236)
T 3qvo_A 24 KNVLIL-GAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-PTNSQIIMGDVLNHAALKQAMQGQDIVYANLTG--- 98 (236)
T ss_dssp EEEEEE-TTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-CTTEEEEECCTTCHHHHHHHHTTCSEEEEECCS---
T ss_pred cEEEEE-eCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-cCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCC---
Confidence 355544 567777777777653 2 57888887 44333222 46899999999873 2347888754432
Q ss_pred ChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 190 GDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 190 ~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
.......+++.++++..+ .++++.+...
T Consensus 99 --~~~~~~~~~~~~~~~~~~-~~~iV~iSS~ 126 (236)
T 3qvo_A 99 --EDLDIQANSVIAAMKACD-VKRLIFVLSL 126 (236)
T ss_dssp --TTHHHHHHHHHHHHHHTT-CCEEEEECCC
T ss_pred --CchhHHHHHHHHHHHHcC-CCEEEEEecc
Confidence 112233455666665411 3577766643
No 376
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=63.24 E-value=65 Score=26.80 Aligned_cols=96 Identities=9% Similarity=0.049 Sum_probs=57.9
Q ss_pred cCCCCeEEEEcCC-ccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCC-C--------CCCceEEEecc
Q 023384 116 FEGLGSLVDVGGG-NGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQ-F--------IPPADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG-~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~-~--------~p~~D~v~~~~ 184 (283)
.....+||=.|+| .|.++..++++.-...+++.|. ++-.+.+++..-..++..+-.+ + ...+|+++-..
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v~d~~ 237 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETA 237 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEEEECS
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCcccccccc
Confidence 5566889988875 4667777788776666788887 6666665542222222221111 0 11367766533
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeecC
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVIN 222 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~ 222 (283)
- . ...++...+++++ ||+++++-....
T Consensus 238 G-----~---~~~~~~~~~~l~~---~G~~v~~g~~~~ 264 (346)
T 4a2c_A 238 G-----V---PQTVELAVEIAGP---HAQLALVGTLHQ 264 (346)
T ss_dssp C-----S---HHHHHHHHHHCCT---TCEEEECCCCSS
T ss_pred c-----c---cchhhhhhheecC---CeEEEEEeccCC
Confidence 1 1 2457788889999 788887765443
No 377
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=62.57 E-value=20 Score=30.60 Aligned_cols=93 Identities=12% Similarity=0.020 Sum_probs=57.0
Q ss_pred cCCCCeEEEEcCC-ccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcC-----CCCCC-----CCceEEEec
Q 023384 116 FEGLGSLVDVGGG-NGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGD-----MFQFI-----PPADAFLFK 183 (283)
Q Consensus 116 ~~~~~~vlDvGgG-~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d-----~~~~~-----p~~D~v~~~ 183 (283)
.....+||-+|+| .|.++..+++..-..++++.|. ++..+.+++..--.++..+ +.+.+ ..+|+++-.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~ 272 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDC 272 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEEC
Confidence 5566899999976 4788888888864337889986 6555554431111122111 11100 148888754
Q ss_pred ccccCCChhHHHHHHHHHHHhhccCCCC-cEEEEEee
Q 023384 184 LVFHGLGDEDGLKILKKRRAAIASNGER-GKVIIIDI 219 (283)
Q Consensus 184 ~vlh~~~d~~~~~iL~~~~~~L~p~~~g-g~lli~d~ 219 (283)
.- . ...++...++|++ + |+++++-.
T Consensus 273 ~G-----~---~~~~~~~~~~l~~---~~G~iv~~G~ 298 (376)
T 1e3i_A 273 AG-----T---AQTLKAAVDCTVL---GWGSCTVVGA 298 (376)
T ss_dssp SC-----C---HHHHHHHHHTBCT---TTCEEEECCC
T ss_pred CC-----C---HHHHHHHHHHhhc---CCCEEEEECC
Confidence 32 1 1457788899999 8 99887764
No 378
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=62.28 E-value=30 Score=26.64 Aligned_cols=95 Identities=15% Similarity=0.215 Sum_probs=54.8
Q ss_pred CeEEEEcCCccHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCC------CCCceEEEecccccCCC
Q 023384 120 GSLVDVGGGNGSLSRIISEAF--PGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQF------IPPADAFLFKLVFHGLG 190 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~------~p~~D~v~~~~vlh~~~ 190 (283)
.+||=.| |+|..+..+++.+ .+.++++++. ++..... ..+++++.+|+.++ +.+.|+|+...... +.
T Consensus 5 ~~ilItG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~-~~ 80 (227)
T 3dhn_A 5 KKIVLIG-ASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE--NEHLKVKKADVSSLDEVCEVCKGADAVISAFNPG-WN 80 (227)
T ss_dssp CEEEEET-CCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC--CTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC----
T ss_pred CEEEEEc-CCchHHHHHHHHHHHCCCEEEEEEcCcccchhc--cCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCC-CC
Confidence 5677664 5677777766654 3468899988 4433222 37899999999872 23578887654322 22
Q ss_pred hh----HHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 191 DE----DGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 191 d~----~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
++ .......++.++++..+ -.+++.+..
T Consensus 81 ~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss 112 (227)
T 3dhn_A 81 NPDIYDETIKVYLTIIDGVKKAG-VNRFLMVGG 112 (227)
T ss_dssp ---CCSHHHHHHHHHHHHHHHTT-CSEEEEECC
T ss_pred ChhHHHHHHHHHHHHHHHHHHhC-CCEEEEeCC
Confidence 11 12444555666665521 246666554
No 379
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=61.79 E-value=14 Score=32.93 Aligned_cols=97 Identities=16% Similarity=0.190 Sum_probs=55.3
Q ss_pred CCCeEEEEcCCccHHHH--HHHHHCCCCeEEEeec-hHHHhcCCCC-------------------CCeEEEEcCCCCCCC
Q 023384 118 GLGSLVDVGGGNGSLSR--IISEAFPGIKCTVLDL-PHVVANLPEA-------------------DNLKYIAGDMFQFIP 175 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~--~l~~~~p~~~~~~~D~-~~~~~~a~~~-------------------~rv~~~~~d~~~~~p 175 (283)
+..+|.=||+|.=.... .|+++ +.+++++|+ ++.++..++. .++.+ ..|..+...
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~--G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~a~~ 83 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI--GHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIEAAVA 83 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHHHHhh
Confidence 45789999888533332 33333 568999998 6666554431 12222 112111122
Q ss_pred CceEEEecccc-----cCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 176 PADAFLFKLVF-----HGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 176 ~~D~v~~~~vl-----h~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
.+|+|+++--- +..+-.....+++.+.+.|+| |.+++.....
T Consensus 84 ~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~----~~iVV~~STv 130 (478)
T 2y0c_A 84 HGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTG----FKVIVDKSTV 130 (478)
T ss_dssp HCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCS----CEEEEECSCC
T ss_pred cCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCC----CCEEEEeCCc
Confidence 47988885321 001115667888899999998 6766665543
No 380
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=61.74 E-value=16 Score=31.07 Aligned_cols=93 Identities=14% Similarity=0.135 Sum_probs=56.8
Q ss_pred cCCCCeEEEEcCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEc-C----CCCC----C-CCceEEEe
Q 023384 116 FEGLGSLVDVGGGN-GSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAG-D----MFQF----I-PPADAFLF 182 (283)
Q Consensus 116 ~~~~~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~-d----~~~~----~-p~~D~v~~ 182 (283)
.....+||-+|+|. |.++..+++..-..++++.|. ++..+.+++ ... .++.. + +.+. . ..+|+++-
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~-~vi~~~~~~~~~~~~v~~~~~~g~D~vid 266 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT-ECINPQDFSKPIQEVLIEMTDGGVDYSFE 266 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCS-EEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc-eEeccccccccHHHHHHHHhCCCCCEEEE
Confidence 55668899999764 788888888764337888886 555555443 111 11211 1 1110 0 14888875
Q ss_pred cccccCCChhHHHHHHHHHHHhhccCCCC-cEEEEEeee
Q 023384 183 KLVFHGLGDEDGLKILKKRRAAIASNGER-GKVIIIDIV 220 (283)
Q Consensus 183 ~~vlh~~~d~~~~~iL~~~~~~L~p~~~g-g~lli~d~~ 220 (283)
..- . ...++...++|++ + |+++++-..
T Consensus 267 ~~g-----~---~~~~~~~~~~l~~---~~G~iv~~G~~ 294 (373)
T 2fzw_A 267 CIG-----N---VKVMRAALEACHK---GWGVSVVVGVA 294 (373)
T ss_dssp CSC-----C---HHHHHHHHHTBCT---TTCEEEECSCC
T ss_pred CCC-----c---HHHHHHHHHhhcc---CCcEEEEEecC
Confidence 432 1 1457788899999 8 998877643
No 381
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=61.64 E-value=7.8 Score=33.34 Aligned_cols=32 Identities=34% Similarity=0.485 Sum_probs=27.2
Q ss_pred CCeEEEEcCCccHHHHH--HHHHCCCCeEEEeec
Q 023384 119 LGSLVDVGGGNGSLSRI--ISEAFPGIKCTVLDL 150 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~--l~~~~p~~~~~~~D~ 150 (283)
.++||=||+|.+.++.+ |.+..++.+++++|.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~ 35 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEP 35 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeC
Confidence 47899999999987766 677788999999985
No 382
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=61.55 E-value=18 Score=30.90 Aligned_cols=93 Identities=12% Similarity=0.094 Sum_probs=56.6
Q ss_pred cCCCCeEEEEcCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcC-----CCCCC-----CCceEEEec
Q 023384 116 FEGLGSLVDVGGGN-GSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGD-----MFQFI-----PPADAFLFK 183 (283)
Q Consensus 116 ~~~~~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d-----~~~~~-----p~~D~v~~~ 183 (283)
.....+||-+|+|. |..+..+++..-..++++.|. ++..+.+++..--.++..+ +.+.+ ..+|+++-.
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~ 268 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEV 268 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEEC
Confidence 55668899999764 788888888864337888886 5555554431111122111 11100 147888754
Q ss_pred ccccCCChhHHHHHHHHHHHhhccCCCC-cEEEEEee
Q 023384 184 LVFHGLGDEDGLKILKKRRAAIASNGER-GKVIIIDI 219 (283)
Q Consensus 184 ~vlh~~~d~~~~~iL~~~~~~L~p~~~g-g~lli~d~ 219 (283)
-- . ...++...++|++ + |+++++-.
T Consensus 269 ~g-----~---~~~~~~~~~~l~~---~~G~iv~~G~ 294 (374)
T 2jhf_A 269 IG-----R---LDTMVTALSCCQE---AYGVSVIVGV 294 (374)
T ss_dssp SC-----C---HHHHHHHHHHBCT---TTCEEEECSC
T ss_pred CC-----C---HHHHHHHHHHhhc---CCcEEEEecc
Confidence 32 1 1457788889999 8 99887654
No 383
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=61.48 E-value=23 Score=29.49 Aligned_cols=89 Identities=15% Similarity=0.119 Sum_probs=56.0
Q ss_pred cCCCCeEEEEcC--CccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEcCCCC-C---------C-CCceEE
Q 023384 116 FEGLGSLVDVGG--GNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAGDMFQ-F---------I-PPADAF 180 (283)
Q Consensus 116 ~~~~~~vlDvGg--G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~-~---------~-p~~D~v 180 (283)
.....+||-.|| |.|..+..+++.. +.++++.|. ++..+.+++ .... .+ |..+ + . ..+|++
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~g~~~-~~--d~~~~~~~~~~~~~~~~~~~d~v 218 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQIGFDA-AF--NYKTVNSLEEALKKASPDGYDCY 218 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSE-EE--ETTSCSCHHHHHHHHCTTCEEEE
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCCcE-EE--ecCCHHHHHHHHHHHhCCCCeEE
Confidence 456689999996 6777777777765 568999987 555554432 1111 11 2221 1 0 247887
Q ss_pred EecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 181 LFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 181 ~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
+-+.- . ..++...+.|++ ||+++++...
T Consensus 219 i~~~g-----~----~~~~~~~~~l~~---~G~~v~~g~~ 246 (333)
T 1v3u_A 219 FDNVG-----G----EFLNTVLSQMKD---FGKIAICGAI 246 (333)
T ss_dssp EESSC-----H----HHHHHHHTTEEE---EEEEEECCCC
T ss_pred EECCC-----h----HHHHHHHHHHhc---CCEEEEEecc
Confidence 65432 2 237788899999 7998877643
No 384
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=60.22 E-value=14 Score=31.46 Aligned_cols=94 Identities=7% Similarity=0.032 Sum_probs=57.1
Q ss_pred cCCCCeEEEEcCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcC-----CCCC----C-CCceEEEec
Q 023384 116 FEGLGSLVDVGGGN-GSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGD-----MFQF----I-PPADAFLFK 183 (283)
Q Consensus 116 ~~~~~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d-----~~~~----~-p~~D~v~~~ 183 (283)
.....+||-+|+|. |.++..+++..-..++++.|. ++..+.+++..--.++..+ +.+. . ..+|+++-.
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~ 268 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVEC 268 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEEC
Confidence 55668999999764 788888888764337888886 5555554431111122111 1110 0 148888754
Q ss_pred ccccCCChhHHHHHHHHHHHhhccCCCC-cEEEEEeee
Q 023384 184 LVFHGLGDEDGLKILKKRRAAIASNGER-GKVIIIDIV 220 (283)
Q Consensus 184 ~vlh~~~d~~~~~iL~~~~~~L~p~~~g-g~lli~d~~ 220 (283)
-- . ...++...++|++ + |+++++-..
T Consensus 269 ~g-----~---~~~~~~~~~~l~~---~~G~iv~~G~~ 295 (373)
T 1p0f_A 269 AG-----R---IETMMNALQSTYC---GSGVTVVLGLA 295 (373)
T ss_dssp SC-----C---HHHHHHHHHTBCT---TTCEEEECCCC
T ss_pred CC-----C---HHHHHHHHHHHhc---CCCEEEEEccC
Confidence 32 1 1457788899999 8 998876643
No 385
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=60.17 E-value=27 Score=29.33 Aligned_cols=87 Identities=17% Similarity=0.165 Sum_probs=56.5
Q ss_pred CCCeEEEEcCC-ccHHHHHHHHHCCCC-eEEEeec-hHHHhcCCCCCCeEEEEcCCCC-C----C----C-CceEEEecc
Q 023384 118 GLGSLVDVGGG-NGSLSRIISEAFPGI-KCTVLDL-PHVVANLPEADNLKYIAGDMFQ-F----I----P-PADAFLFKL 184 (283)
Q Consensus 118 ~~~~vlDvGgG-~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~-~----~----p-~~D~v~~~~ 184 (283)
...+||-+|+| .|..+..+++.. +. ++++.|. ++..+.+++. --.++ |..+ + + + .+|+++-..
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l-a~~v~--~~~~~~~~~~~~~~~~~g~D~vid~~ 239 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY-ADRLV--NPLEEDLLEVVRRVTGSGVEVLLEFS 239 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT-CSEEE--CTTTSCHHHHHHHHHSSCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-HHhcc--CcCccCHHHHHHHhcCCCCCEEEECC
Confidence 66789999964 478888888876 45 8999997 6666666542 11122 2222 1 1 2 478887643
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
- . ...++...+.|++ +|+++++-.
T Consensus 240 g-----~---~~~~~~~~~~l~~---~G~iv~~g~ 263 (343)
T 2dq4_A 240 G-----N---EAAIHQGLMALIP---GGEARILGI 263 (343)
T ss_dssp C-----C---HHHHHHHHHHEEE---EEEEEECCC
T ss_pred C-----C---HHHHHHHHHHHhc---CCEEEEEec
Confidence 2 1 1447788899999 788887654
No 386
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=60.13 E-value=34 Score=28.57 Aligned_cols=88 Identities=10% Similarity=0.063 Sum_probs=56.9
Q ss_pred cCCCCeEEEEcC--CccHHHHHHHHHCCCCeEEEeec-hHHHhcCC-C-CCCeEEEEcCCCC--CC---------CCceE
Q 023384 116 FEGLGSLVDVGG--GNGSLSRIISEAFPGIKCTVLDL-PHVVANLP-E-ADNLKYIAGDMFQ--FI---------PPADA 179 (283)
Q Consensus 116 ~~~~~~vlDvGg--G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-~-~~rv~~~~~d~~~--~~---------p~~D~ 179 (283)
.....+||-+|+ |.|..+..+++.. +.++++.|. ++..+.++ + .... .+ |..+ ++ ..+|+
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~~g~~~-~~--d~~~~~~~~~~~~~~~~~~~d~ 228 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKFGFDD-AF--NYKEESDLTAALKRCFPNGIDI 228 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTSCCSE-EE--ETTSCSCSHHHHHHHCTTCEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCce-EE--ecCCHHHHHHHHHHHhCCCCcE
Confidence 556789999995 6788888888875 468999997 55555543 2 2111 22 2221 11 13788
Q ss_pred EEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 180 FLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 180 v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
++-..- . ..++...++|++ ||+++++-.
T Consensus 229 vi~~~g-----~----~~~~~~~~~l~~---~G~~v~~G~ 256 (345)
T 2j3h_A 229 YFENVG-----G----KMLDAVLVNMNM---HGRIAVCGM 256 (345)
T ss_dssp EEESSC-----H----HHHHHHHTTEEE---EEEEEECCC
T ss_pred EEECCC-----H----HHHHHHHHHHhc---CCEEEEEcc
Confidence 775432 2 357888899999 799887754
No 387
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=60.02 E-value=16 Score=30.74 Aligned_cols=90 Identities=16% Similarity=0.163 Sum_probs=56.4
Q ss_pred cCCCCeEEEEcC--CccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCC--CC--------C-CceEEE
Q 023384 116 FEGLGSLVDVGG--GNGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQ--FI--------P-PADAFL 181 (283)
Q Consensus 116 ~~~~~~vlDvGg--G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~--~~--------p-~~D~v~ 181 (283)
.....+||-+|+ |.|..+..+++.. +.++++.|. ++..+.+++...-.++ |..+ ++ . .+|+++
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~~g~~~~~--d~~~~~~~~~~~~~~~~~~~D~vi 243 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRSIGGEVFI--DFTKEKDIVGAVLKATDGGAHGVI 243 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHHTTCCEEE--ETTTCSCHHHHHHHHHTSCEEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHHcCCceEE--ecCccHhHHHHHHHHhCCCCCEEE
Confidence 566789999997 5788888888775 468888886 5444443321111122 3321 11 1 378877
Q ss_pred ecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 182 FKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 182 ~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
-... . ...++.+.++|++ +|+++++..
T Consensus 244 ~~~g-----~---~~~~~~~~~~l~~---~G~iv~~g~ 270 (347)
T 2hcy_A 244 NVSV-----S---EAAIEASTRYVRA---NGTTVLVGM 270 (347)
T ss_dssp ECSS-----C---HHHHHHHTTSEEE---EEEEEECCC
T ss_pred ECCC-----c---HHHHHHHHHHHhc---CCEEEEEeC
Confidence 6432 1 2457888899999 798887654
No 388
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=59.91 E-value=22 Score=31.43 Aligned_cols=100 Identities=16% Similarity=0.173 Sum_probs=55.9
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCC-------------------CCeEEEEcCCCCCCCCc
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPEA-------------------DNLKYIAGDMFQFIPPA 177 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------------------~rv~~~~~d~~~~~p~~ 177 (283)
+..+|-=||.|.=....+.+-+--+.+++++|+ ++.++..++. .++.+ ..|..+....+
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~-ttd~~ea~~~a 85 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF-TTDLAEGVKDA 85 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHHTTC
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE-ECCHHHHHhcC
Confidence 446777887764333322222223578999999 6666654431 22332 22322223358
Q ss_pred eEEEecc--cc---cCCCh-hHHHHHHHHHHHhhccCCCCcEEEEEeeecC
Q 023384 178 DAFLFKL--VF---HGLGD-EDGLKILKKRRAAIASNGERGKVIIIDIVIN 222 (283)
Q Consensus 178 D~v~~~~--vl---h~~~d-~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~ 222 (283)
|+|+++- -. +.-+| ....++++.+.+.|++ |.++|.....+
T Consensus 86 Dvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~----g~iVV~~STv~ 132 (446)
T 4a7p_A 86 DAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTK----PSVIVTKSTVP 132 (446)
T ss_dssp SEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCS----CCEEEECSCCC
T ss_pred CEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCC----CCEEEEeCCCC
Confidence 9988862 21 11111 2467788899999998 67777665444
No 389
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=59.50 E-value=55 Score=26.84 Aligned_cols=41 Identities=12% Similarity=0.135 Sum_probs=27.0
Q ss_pred CCCCceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 173 FIPPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 173 ~~p~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
.+.+||+|++...-..++++. .+++.+.++. ||.++.+-..
T Consensus 55 ~L~~~D~vV~~~~~~~l~~~~----~~~l~~yV~~---Ggglv~~H~a 95 (281)
T 4e5v_A 55 DFSPYQLVVLDYNGDSWPEET----NRRFLEYVQN---GGGVVIYHAA 95 (281)
T ss_dssp CCTTCSEEEECCCSSCCCHHH----HHHHHHHHHT---TCEEEEEGGG
T ss_pred hhhcCCEEEEeCCCCcCCHHH----HHHHHHHHHc---CCCEEEEecc
Confidence 355799999766544455543 5667777886 6777766643
No 390
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=58.92 E-value=17 Score=29.17 Aligned_cols=86 Identities=17% Similarity=0.311 Sum_probs=49.6
Q ss_pred CeEEEEcCCc-cH-HHHHHHHHCCCCe-EEEeec-hHHHhcCCCCCCeEEEEcCCCCCCCCceEEEecccccCCChhHHH
Q 023384 120 GSLVDVGGGN-GS-LSRIISEAFPGIK-CTVLDL-PHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLGDEDGL 195 (283)
Q Consensus 120 ~~vlDvGgG~-G~-~~~~l~~~~p~~~-~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~~~ 195 (283)
.+|.=||+|. |. ++..+++. +.+ +++.|. ++..+...+.-++.. ..|..+...+.|+|+..- ++....
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~Dvvi~av-----~~~~~~ 82 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK--GFRIVQVYSRTEESARELAQKVEAEY-TTDLAEVNPYAKLYIVSL-----KDSAFA 82 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSHHHHHHHHHHTTCEE-ESCGGGSCSCCSEEEECC-----CHHHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCCce-eCCHHHHhcCCCEEEEec-----CHHHHH
Confidence 4788899863 32 23334444 345 788888 555544332112332 233333344689998854 455567
Q ss_pred HHHHHHHHhhccCCCCcEEEEE
Q 023384 196 KILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 196 ~iL~~~~~~L~p~~~gg~lli~ 217 (283)
.+++.+.+.+++ |.+++.
T Consensus 83 ~v~~~l~~~~~~----~~ivv~ 100 (266)
T 3d1l_A 83 ELLQGIVEGKRE----EALMVH 100 (266)
T ss_dssp HHHHHHHTTCCT----TCEEEE
T ss_pred HHHHHHHhhcCC----CcEEEE
Confidence 788888888887 454443
No 391
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=57.30 E-value=7.7 Score=34.39 Aligned_cols=89 Identities=17% Similarity=0.210 Sum_probs=60.3
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHh-------cCCCCCCeEEEEcCCCCCCCCceEEEecccccCCC
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVA-------NLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLG 190 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~-------~a~~~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~ 190 (283)
..++|.=||+|+=..+.++--+-.++.+++-=.+.... .|. .+..+ .+++.+..+.+|+|++ -.|
T Consensus 36 kgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~-~~Gf~--v~~~~eA~~~ADvV~~-----L~P 107 (491)
T 3ulk_A 36 QGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKAT-ENGFK--VGTYEELIPQADLVIN-----LTP 107 (491)
T ss_dssp TTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHH-HTTCE--EEEHHHHGGGCSEEEE-----CSC
T ss_pred cCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHH-HCCCE--ecCHHHHHHhCCEEEE-----eCC
Confidence 34899999999988888887776788876654444322 222 23333 2334444556899887 348
Q ss_pred hhHHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 191 DEDGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 191 d~~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
|+.-..+.+.|...|+| |..|.+-
T Consensus 108 D~~q~~vy~~I~p~lk~----G~~L~fa 131 (491)
T 3ulk_A 108 DKQHSDVVRTVQPLMKD----GAALGYS 131 (491)
T ss_dssp GGGHHHHHHHHGGGSCT----TCEEEES
T ss_pred hhhHHHHHHHHHhhCCC----CCEEEec
Confidence 88888899999999999 4444444
No 392
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=56.78 E-value=24 Score=28.93 Aligned_cols=80 Identities=15% Similarity=0.128 Sum_probs=45.4
Q ss_pred CeEEEEcCCc-cHH-HHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEE--------c---CCCC---CCCCceEEEe
Q 023384 120 GSLVDVGGGN-GSL-SRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIA--------G---DMFQ---FIPPADAFLF 182 (283)
Q Consensus 120 ~~vlDvGgG~-G~~-~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~--------~---d~~~---~~p~~D~v~~ 182 (283)
.+|.=||+|. |.. +..+++. +.+++++|. ++.++..++. .+.... . +..+ .+..+|+|++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 80 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG--GNDVTLIDQWPAHIEAIRKN-GLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIA 80 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHH-CEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHhC-CEEEEeCCCeeEecceeecchhhcccCCCCCEEEE
Confidence 4788898864 222 2223333 458899998 6655543321 122111 0 1111 1226899888
Q ss_pred cccccCCChhHHHHHHHHHHHhhcc
Q 023384 183 KLVFHGLGDEDGLKILKKRRAAIAS 207 (283)
Q Consensus 183 ~~vlh~~~d~~~~~iL~~~~~~L~p 207 (283)
.- +......+++.+.+.++|
T Consensus 81 ~v-----~~~~~~~v~~~l~~~l~~ 100 (316)
T 2ew2_A 81 LT-----KAQQLDAMFKAIQPMITE 100 (316)
T ss_dssp CS-----CHHHHHHHHHHHGGGCCT
T ss_pred Ee-----ccccHHHHHHHHHHhcCC
Confidence 54 455667888888888887
No 393
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=56.77 E-value=56 Score=24.40 Aligned_cols=98 Identities=17% Similarity=0.141 Sum_probs=54.2
Q ss_pred CeEEEEcCCccHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCC--C----CCceEEEecccccCC-
Q 023384 120 GSLVDVGGGNGSLSRIISEAF--PGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQF--I----PPADAFLFKLVFHGL- 189 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~--~----p~~D~v~~~~vlh~~- 189 (283)
.+||=.| |+|..+..+++++ .+.++++++. ++..... ...++.++.+|+.++ + .+.|+++........
T Consensus 4 ~~ilVtG-atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~ 81 (206)
T 1hdo_A 4 KKIAIFG-ATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDL 81 (206)
T ss_dssp CEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-SCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCC
T ss_pred CEEEEEc-CCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-cCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCC
Confidence 4677564 5677777766654 3568888887 4333221 146789999999873 2 247888765443221
Q ss_pred C-hhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 190 G-DEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 190 ~-d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
. .+.......++.++++..+ .++++.+...
T Consensus 82 ~~~~~n~~~~~~~~~~~~~~~-~~~~v~~Ss~ 112 (206)
T 1hdo_A 82 SPTTVMSEGARNIVAAMKAHG-VDKVVACTSA 112 (206)
T ss_dssp SCCCHHHHHHHHHHHHHHHHT-CCEEEEECCG
T ss_pred CccchHHHHHHHHHHHHHHhC-CCeEEEEeee
Confidence 1 1112333444555554311 2566655543
No 394
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=55.96 E-value=21 Score=30.57 Aligned_cols=94 Identities=15% Similarity=0.075 Sum_probs=57.6
Q ss_pred cCCCCeEEEEcCC-ccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcC------CCCC----CC--CceEEE
Q 023384 116 FEGLGSLVDVGGG-NGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGD------MFQF----IP--PADAFL 181 (283)
Q Consensus 116 ~~~~~~vlDvGgG-~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d------~~~~----~p--~~D~v~ 181 (283)
.....+||-+|+| .|..+..+++..-..++++.|. ++..+.+++..--.++..+ +.+. .+ .+|+++
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvi 272 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFIL 272 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEE
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEE
Confidence 3455789999854 6888888888864368999996 6665555431111222221 1110 11 489887
Q ss_pred ecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 182 FKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 182 ~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
-..- .+ ..++...+.|++ +|+++++-..
T Consensus 273 d~~g-----~~---~~~~~~~~~l~~---~G~iv~~G~~ 300 (380)
T 1vj0_A 273 EATG-----DS---RALLEGSELLRR---GGFYSVAGVA 300 (380)
T ss_dssp ECSS-----CT---THHHHHHHHEEE---EEEEEECCCC
T ss_pred ECCC-----CH---HHHHHHHHHHhc---CCEEEEEecC
Confidence 6432 11 346778889999 7998877543
No 395
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=55.95 E-value=5 Score=33.58 Aligned_cols=89 Identities=16% Similarity=0.207 Sum_probs=55.7
Q ss_pred cCCCCeEEEEc--CCccHHHHHHHHHCCCCeEEEeechHHHhcCCC-CCCeEEEEc---C-CCCCCCCceEEEecccccC
Q 023384 116 FEGLGSLVDVG--GGNGSLSRIISEAFPGIKCTVLDLPHVVANLPE-ADNLKYIAG---D-MFQFIPPADAFLFKLVFHG 188 (283)
Q Consensus 116 ~~~~~~vlDvG--gG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-~~rv~~~~~---d-~~~~~p~~D~v~~~~vlh~ 188 (283)
.....+||=+| ||.|..+..+++.. +.++++.+.++..+.+++ ... .++.. | +.+....+|+++-.-
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~~~~~~~~~~~lGa~-~~i~~~~~~~~~~~~~g~D~v~d~~---- 223 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTASKRNHAFLKALGAE-QCINYHEEDFLLAISTPVDAVIDLV---- 223 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEECHHHHHHHHHHTCS-EEEETTTSCHHHHCCSCEEEEEESS----
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEeccchHHHHHHcCCC-EEEeCCCcchhhhhccCCCEEEECC----
Confidence 66778999986 56788898899886 568888777554554443 111 12221 1 111223588887643
Q ss_pred CChhHHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 189 LGDEDGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 189 ~~d~~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
..+ .+....++|++ +|+++.+-
T Consensus 224 -g~~----~~~~~~~~l~~---~G~iv~~g 245 (321)
T 3tqh_A 224 -GGD----VGIQSIDCLKE---TGCIVSVP 245 (321)
T ss_dssp -CHH----HHHHHGGGEEE---EEEEEECC
T ss_pred -CcH----HHHHHHHhccC---CCEEEEeC
Confidence 222 23778899999 79888763
No 396
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=55.82 E-value=28 Score=28.99 Aligned_cols=84 Identities=17% Similarity=0.117 Sum_probs=47.7
Q ss_pred CeEEEEcCCccHHHHHHHHHC--CC-CeEEEeec-h-------HHHhcCCCCCCeEEEEc-CCCCCCCCceEEEeccccc
Q 023384 120 GSLVDVGGGNGSLSRIISEAF--PG-IKCTVLDL-P-------HVVANLPEADNLKYIAG-DMFQFIPPADAFLFKLVFH 187 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~--p~-~~~~~~D~-~-------~~~~~a~~~~rv~~~~~-d~~~~~p~~D~v~~~~vlh 187 (283)
.+|.=||+|. .+..+++.+ -+ .++++.|. + +..+...+. .+ .. +..+-....|+|++.-
T Consensus 25 m~IgvIG~G~--mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~-g~---~~~s~~e~~~~aDvVi~av--- 95 (317)
T 4ezb_A 25 TTIAFIGFGE--AAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAEL-GV---EPLDDVAGIACADVVLSLV--- 95 (317)
T ss_dssp CEEEEECCSH--HHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHT-TC---EEESSGGGGGGCSEEEECC---
T ss_pred CeEEEECccH--HHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHC-CC---CCCCHHHHHhcCCEEEEec---
Confidence 5788898763 333333221 24 68999998 4 233322211 22 22 3333334589988843
Q ss_pred CCChhHHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 188 GLGDEDGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 188 ~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
++....+.++.+.+.++| |.++|..
T Consensus 96 --p~~~~~~~~~~i~~~l~~----~~ivv~~ 120 (317)
T 4ezb_A 96 --VGAATKAVAASAAPHLSD----EAVFIDL 120 (317)
T ss_dssp --CGGGHHHHHHHHGGGCCT----TCEEEEC
T ss_pred --CCHHHHHHHHHHHhhcCC----CCEEEEC
Confidence 555566677888888888 5555433
No 397
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=55.11 E-value=21 Score=29.76 Aligned_cols=64 Identities=19% Similarity=0.237 Sum_probs=38.7
Q ss_pred CCeEEEEcCCccH--HHHHHHHHCCCCeEEEeechHH-HhcCCC-----CCCeEEEEcCCCCCCCCceEEEecc
Q 023384 119 LGSLVDVGGGNGS--LSRIISEAFPGIKCTVLDLPHV-VANLPE-----ADNLKYIAGDMFQFIPPADAFLFKL 184 (283)
Q Consensus 119 ~~~vlDvGgG~G~--~~~~l~~~~p~~~~~~~D~~~~-~~~a~~-----~~rv~~~~~d~~~~~p~~D~v~~~~ 184 (283)
..+|.=||+|+.. .+..++.+....+++++|+.+. ...+.. ..++.. ..|+ +.+.++|+|+..-
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~-t~d~-~~l~~aD~Vi~aa 85 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEI-SKDL-SASAHSKVVIFTV 85 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEE-ESCG-GGGTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEE-eCCH-HHHCCCCEEEEcC
Confidence 3689999998633 4445555544348999999432 111111 246665 3675 5666799998864
No 398
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=54.13 E-value=23 Score=29.52 Aligned_cols=91 Identities=12% Similarity=0.041 Sum_probs=57.6
Q ss_pred cCCCCeEEEEc--CCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCC---C----C-C-CceEEEec
Q 023384 116 FEGLGSLVDVG--GGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQ---F----I-P-PADAFLFK 183 (283)
Q Consensus 116 ~~~~~~vlDvG--gG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~---~----~-p-~~D~v~~~ 183 (283)
.....+||-+| ||.|..+..+++.. +.++++.|. ++..+.+++..--.++..+-.+ . . + .+|+++-+
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~ 224 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDS 224 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEEC
Confidence 56678999998 46788888888875 569999998 6666555442111122211111 0 0 1 38888764
Q ss_pred ccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 184 LVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 184 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
.- . ..++.+.+.|++ +|+++++-.
T Consensus 225 ~g-----~----~~~~~~~~~l~~---~G~iv~~G~ 248 (334)
T 3qwb_A 225 VG-----K----DTFEISLAALKR---KGVFVSFGN 248 (334)
T ss_dssp CG-----G----GGHHHHHHHEEE---EEEEEECCC
T ss_pred CC-----h----HHHHHHHHHhcc---CCEEEEEcC
Confidence 42 1 346778889999 799888754
No 399
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=53.74 E-value=32 Score=28.48 Aligned_cols=110 Identities=14% Similarity=0.138 Sum_probs=62.3
Q ss_pred HHHHHHHCCCCeEEEeechHHHh-----cCCCCCCeEEE-EcCCCCC-C-CCceEEEecc----cccCCC--hhHH--H-
Q 023384 133 SRIISEAFPGIKCTVLDLPHVVA-----NLPEADNLKYI-AGDMFQF-I-PPADAFLFKL----VFHGLG--DEDG--L- 195 (283)
Q Consensus 133 ~~~l~~~~p~~~~~~~D~~~~~~-----~a~~~~rv~~~-~~d~~~~-~-p~~D~v~~~~----vlh~~~--d~~~--~- 195 (283)
...++.+.++-++.++|.+-.+. .........+. .+||..| . +.+|+|++.. .-|++. .+.+ .
T Consensus 155 ~~~~~~k~~g~~vl~v~~~~~~p~k~v~wi~Pi~GAt~~~~lDfg~p~~~~k~DvV~SDMApn~sGh~yqQC~DHarii~ 234 (320)
T 2hwk_A 155 FSSFVSKLKGRTVLVVGEKLSVPGKMVDWLSDRPEATFRARLDLGIPGDVPKYDIIFVNVRTPYKYHHYQQCEDHAIKLS 234 (320)
T ss_dssp CHHHHHTSSCSEEEEEESCCCCTTSEEEEEESSTTCSEECCGGGCSCTTSCCEEEEEEECCCCCCSCHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCcEEEEEecccccCCceeEeeccCCCceeecccccCCccccCcCCEEEEcCCCCCCCccccccchHHHHHH
Confidence 34567778888877765221111 11112334455 6788874 2 3599998833 344422 1211 1
Q ss_pred HHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCCeeeEEEc
Q 023384 196 KILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFSHYKITPI 272 (283)
Q Consensus 196 ~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 272 (283)
-+++...+.|+| ||.+++--. +|..|..+++...|++. |+.+++...
T Consensus 235 Lal~fA~~vLkP---GGtfV~Kvy--------------------------ggaDr~se~lv~~LaR~-F~~Vr~vKP 281 (320)
T 2hwk_A 235 MLTKKACLHLNP---GGTCVSIGY--------------------------GYADRASESIIGAIARQ-FKFSRVCKP 281 (320)
T ss_dssp HTHHHHGGGEEE---EEEEEEEEC--------------------------CCCSHHHHHHHHHHHTT-EEEEEEECC
T ss_pred HHHHHHHHhcCC---CceEEEEEe--------------------------cCCcccHHHHHHHHHHh-cceeeeeCC
Confidence 135666788999 787766331 23444567777777776 888776554
No 400
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=53.72 E-value=37 Score=28.50 Aligned_cols=89 Identities=19% Similarity=0.145 Sum_probs=55.3
Q ss_pred CCCeEEEEcCC-ccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCC-C--------CC--CceEEEecc
Q 023384 118 GLGSLVDVGGG-NGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQ-F--------IP--PADAFLFKL 184 (283)
Q Consensus 118 ~~~~vlDvGgG-~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~-~--------~p--~~D~v~~~~ 184 (283)
...+||-+|+| .|..+..+++..-..++++.|. ++..+.+++..--.++ |..+ + .+ .+|+++-..
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~--~~~~~~~~~~v~~~~~g~g~D~vid~~ 244 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVI--NPFEEDVVKEVMDITDGNGVDVFLEFS 244 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEE--CTTTSCHHHHHHHHTTTSCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE--CCCCcCHHHHHHHHcCCCCCCEEEECC
Confidence 56789999975 4788888888763338899987 5555554431101112 2211 1 01 488887643
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
- . ...++.+.+.|++ +|+++++-.
T Consensus 245 g-----~---~~~~~~~~~~l~~---~G~iv~~g~ 268 (348)
T 2d8a_A 245 G-----A---PKALEQGLQAVTP---AGRVSLLGL 268 (348)
T ss_dssp C-----C---HHHHHHHHHHEEE---EEEEEECCC
T ss_pred C-----C---HHHHHHHHHHHhc---CCEEEEEcc
Confidence 2 1 2457788899999 788887754
No 401
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=53.48 E-value=99 Score=25.88 Aligned_cols=131 Identities=9% Similarity=-0.017 Sum_probs=68.3
Q ss_pred CeEEEEcCCccHHHHHHHHHC--CCCeEEEeec-hHHH--hcCCCCCCeEEEEcC-CCCC------CCCceEEEeccccc
Q 023384 120 GSLVDVGGGNGSLSRIISEAF--PGIKCTVLDL-PHVV--ANLPEADNLKYIAGD-MFQF------IPPADAFLFKLVFH 187 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~-~~~~--~~a~~~~rv~~~~~d-~~~~------~p~~D~v~~~~vlh 187 (283)
.+||=. |++|..+..+++.+ .+.++++++. ++.. .......+++++.+| +.++ +.+.|+++.....+
T Consensus 6 ~~ilVt-GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~~ 84 (352)
T 1xgk_A 6 KTIAVV-GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQ 84 (352)
T ss_dssp CCEEEE-STTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCST
T ss_pred CEEEEE-CCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCCC
Confidence 456655 56777777766554 3567777776 3221 111113478999999 7662 23478887544322
Q ss_pred CCChhHHHHHHHHHHHhhccCCCC--cEEEEEeeecCCCccchhhhhhhhhcccccccccCCccCCHHHHHHHHHHCCCC
Q 023384 188 GLGDEDGLKILKKRRAAIASNGER--GKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDACFS 265 (283)
Q Consensus 188 ~~~d~~~~~iL~~~~~~L~p~~~g--g~lli~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 265 (283)
....... -+++.++++. . | ++++.+........... .......+..+.++++++.|++
T Consensus 85 --~~~~~~~-~~~l~~aa~~-~-g~v~~~V~~SS~~~~~~~~~---------------~~~~y~~sK~~~E~~~~~~gi~ 144 (352)
T 1xgk_A 85 --AGDEIAI-GKDLADAAKR-A-GTIQHYIYSSMPDHSLYGPW---------------PAVPMWAPKFTVENYVRQLGLP 144 (352)
T ss_dssp --TSCHHHH-HHHHHHHHHH-H-SCCSEEEEEECCCGGGTSSC---------------CCCTTTHHHHHHHHHHHTSSSC
T ss_pred --CcHHHHH-HHHHHHHHHH-c-CCccEEEEeCCccccccCCC---------------CCccHHHHHHHHHHHHHHcCCC
Confidence 1122222 2666666654 1 3 46666554321000000 0011223556677888888887
Q ss_pred eeeEEE
Q 023384 266 HYKITP 271 (283)
Q Consensus 266 ~~~~~~ 271 (283)
.+-+++
T Consensus 145 ~~ivrp 150 (352)
T 1xgk_A 145 STFVYA 150 (352)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 665553
No 402
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=52.94 E-value=23 Score=29.61 Aligned_cols=91 Identities=20% Similarity=0.190 Sum_probs=58.4
Q ss_pred cCCCCeEEEEcC--CccHHHHHHHHHCCCCeEEEeec-hHHHhcC-CCCCCeEEEEcCCCC-C--------CC-CceEEE
Q 023384 116 FEGLGSLVDVGG--GNGSLSRIISEAFPGIKCTVLDL-PHVVANL-PEADNLKYIAGDMFQ-F--------IP-PADAFL 181 (283)
Q Consensus 116 ~~~~~~vlDvGg--G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a-~~~~rv~~~~~d~~~-~--------~p-~~D~v~ 181 (283)
.....+||-+|+ |.|..+..+++.. +.++++.|. ++..+.+ ++..--..+ |..+ + .+ .+|+++
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~d~vi 223 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEELGFDGAI--DYKNEDLAAGLKRECPKGIDVFF 223 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCCSEEE--ETTTSCHHHHHHHHCTTCEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCCEEE--ECCCHHHHHHHHHhcCCCceEEE
Confidence 566789999986 6788888888875 559999997 6666555 331111112 2211 1 11 378876
Q ss_pred ecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 182 FKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 182 ~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
-+. .. ..++.+.+.|++ +|+++++-...
T Consensus 224 ~~~-----g~----~~~~~~~~~l~~---~G~iv~~G~~~ 251 (336)
T 4b7c_A 224 DNV-----GG----EILDTVLTRIAF---KARIVLCGAIS 251 (336)
T ss_dssp ESS-----CH----HHHHHHHTTEEE---EEEEEECCCGG
T ss_pred ECC-----Cc----chHHHHHHHHhh---CCEEEEEeecc
Confidence 533 22 357888899999 79988876443
No 403
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=52.59 E-value=75 Score=28.04 Aligned_cols=89 Identities=17% Similarity=0.185 Sum_probs=52.1
Q ss_pred CCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---------------------CCCeEEEEcCCCCCCCC
Q 023384 119 LGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE---------------------ADNLKYIAGDMFQFIPP 176 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------------------~~rv~~~~~d~~~~~p~ 176 (283)
..+|.-||+|.=..+++..-...+.++++.|. ++.++.+.+ .....+ ..|. +...+
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~-~~~~~ 114 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST-KELST 114 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCG-GGGTT
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCH-HHHCC
Confidence 45799999986333333333334678999998 554433211 111222 4454 33456
Q ss_pred ceEEEecccccCCChh-HHHHHHHHHHHhhccCCCCcEEEEE
Q 023384 177 ADAFLFKLVFHGLGDE-DGLKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 177 ~D~v~~~~vlh~~~d~-~~~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
+|+|+..-. .+. -...+++++.+.++| +.+++.
T Consensus 115 aDlVIeaVp----e~~~~k~~v~~~l~~~~~~----~~ii~s 148 (463)
T 1zcj_A 115 VDLVVEAVF----EDMNLKKKVFAELSALCKP----GAFLCT 148 (463)
T ss_dssp CSEEEECCC----SCHHHHHHHHHHHHHHSCT----TCEEEE
T ss_pred CCEEEEcCC----CCHHHHHHHHHHHHhhCCC----CeEEEe
Confidence 899988653 222 235778889889988 555554
No 404
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=52.38 E-value=76 Score=25.93 Aligned_cols=86 Identities=14% Similarity=0.228 Sum_probs=49.9
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-h-----HHHhcCC----------------------CCCCe-EEEEc
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-P-----HVVANLP----------------------EADNL-KYIAG 168 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~-----~~~~~a~----------------------~~~rv-~~~~~ 168 (283)
...+||=||||.-.....-.-.--+.+++++|. . +.+.... ...++ +++.+
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~i~~ 91 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDLHKSIIPKFGKFIQNKDQPDYREDAKRFINPNWDPTKNEIYEYIRS 91 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEECTTHHHHHCGGGC-----------CEEECTTCCTTSCCCSEEECS
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCCcchhHHHHHHHhccccccccchhhcccccccccccCCeeEEEcC
Confidence 357899999997655554222223577877774 1 1122111 23567 88888
Q ss_pred CCCC-CCC------CceEEEecccccCCChhHHHHHHHHHHHhhcc
Q 023384 169 DMFQ-FIP------PADAFLFKLVFHGLGDEDGLKILKKRRAAIAS 207 (283)
Q Consensus 169 d~~~-~~p------~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p 207 (283)
++.. .+. .+|+|+..-- .++....+.+.+++....
T Consensus 92 ~~~~~dL~~l~~~~~adlViaat~----d~~~n~~I~~~Ar~~f~~ 133 (274)
T 1kyq_A 92 DFKDEYLDLENENDAWYIIMTCIP----DHPESARIYHLCKERFGK 133 (274)
T ss_dssp SCCGGGGCCSSTTCCEEEEEECCS----CHHHHHHHHHHHHHHHCT
T ss_pred CCCHHHHhhcccCCCeEEEEEcCC----ChHHHHHHHHHHHHhcCC
Confidence 7766 555 6888887542 222445556655555443
No 405
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=52.33 E-value=46 Score=29.47 Aligned_cols=96 Identities=15% Similarity=0.156 Sum_probs=53.8
Q ss_pred CeEEEEcCCccH--HHHHHHHHCCCCeEEEeec-hHHHhcCCCC------------------CCeEEEEcCCCCCCCCce
Q 023384 120 GSLVDVGGGNGS--LSRIISEAFPGIKCTVLDL-PHVVANLPEA------------------DNLKYIAGDMFQFIPPAD 178 (283)
Q Consensus 120 ~~vlDvGgG~G~--~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------------------~rv~~~~~d~~~~~p~~D 178 (283)
.+|.=||+|.=. ++..++++.++.+++++|+ ++.++..++. .++.+ ..|..+....+|
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~-t~~~~e~~~~aD 84 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF-STNIDDAIKEAD 84 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHHHCS
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHHhcCC
Confidence 578889987433 3344566655778999999 6666554321 12222 112111122479
Q ss_pred EEEecc--cccC--------CChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 179 AFLFKL--VFHG--------LGDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 179 ~v~~~~--vlh~--------~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
+|+++- -.+. .+-.....+++.+.+.|++ |.++|....
T Consensus 85 vViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~----g~iVV~~ST 132 (467)
T 2q3e_A 85 LVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNG----YKIVTEKST 132 (467)
T ss_dssp EEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCS----EEEEEECSC
T ss_pred EEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCC----CCEEEECCc
Confidence 888763 2221 1111245667788888887 676665533
No 406
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=52.26 E-value=14 Score=30.24 Aligned_cols=90 Identities=16% Similarity=0.196 Sum_probs=50.5
Q ss_pred CCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCC------------------------CCeEEEEcCCCCC
Q 023384 119 LGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPEA------------------------DNLKYIAGDMFQF 173 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------------------------~rv~~~~~d~~~~ 173 (283)
..+|.=||+|.=..+++..-+.-+.++++.|. ++.++.+.+. .++.+ ..|..+.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~ 82 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQA 82 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHH
Confidence 35788888875222222211223678999998 6655443210 12332 2232222
Q ss_pred CCCceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEE
Q 023384 174 IPPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVII 216 (283)
Q Consensus 174 ~p~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli 216 (283)
..++|+|+..-.- ..+....+++++.+.++| +.+++
T Consensus 83 ~~~aDlVi~av~~---~~~~~~~v~~~l~~~~~~----~~il~ 118 (283)
T 4e12_A 83 VKDADLVIEAVPE---SLDLKRDIYTKLGELAPA----KTIFA 118 (283)
T ss_dssp TTTCSEEEECCCS---CHHHHHHHHHHHHHHSCT----TCEEE
T ss_pred hccCCEEEEeccC---cHHHHHHHHHHHHhhCCC----CcEEE
Confidence 4568999885421 122456788999999998 55555
No 407
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=52.13 E-value=11 Score=31.82 Aligned_cols=40 Identities=23% Similarity=0.304 Sum_probs=32.5
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCC
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLP 158 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~ 158 (283)
.....|||-=||+|..+.+..+. +.+++++|+ +...+.++
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~~~~~~~~ 291 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKPEYVAASA 291 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCHHHHHHHH
Confidence 45679999999999999987776 678999999 66655554
No 408
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=51.99 E-value=50 Score=22.04 Aligned_cols=62 Identities=19% Similarity=0.138 Sum_probs=39.4
Q ss_pred CeEEEEcCCccHHHHHHHH---HCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCC------CCCceEEEecc
Q 023384 120 GSLVDVGGGNGSLSRIISE---AFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQF------IPPADAFLFKL 184 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~---~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~------~p~~D~v~~~~ 184 (283)
.+|+=+|+ |..+..+++ +....+++++|. ++..+... ..++.+...|..++ +.++|+++..-
T Consensus 6 ~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~ 77 (118)
T 3ic5_A 6 WNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-RMGVATKQVDAKDEAGLAKALGGFDAVISAA 77 (118)
T ss_dssp EEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-TTTCEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred CeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hCCCcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 57888887 555444433 333367889998 55554433 34677788888762 23578887755
No 409
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=51.60 E-value=6.7 Score=32.41 Aligned_cols=90 Identities=12% Similarity=0.077 Sum_probs=54.8
Q ss_pred cCCCCeEEEEcC--CccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEc----CCCCCCCCceEEEecccccC
Q 023384 116 FEGLGSLVDVGG--GNGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAG----DMFQFIPPADAFLFKLVFHG 188 (283)
Q Consensus 116 ~~~~~~vlDvGg--G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~----d~~~~~p~~D~v~~~~vlh~ 188 (283)
+....+||-+|+ |.|..+..+++.. +.++++.|. ++..+.+++..--.++.. |+.+.+..+|+++- .-
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g--- 197 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VR--- 197 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CS---
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CC---
Confidence 456689999996 5788888888876 468999987 554444332111112221 11112245888876 32
Q ss_pred CChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 189 LGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 189 ~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
. ..++...++|++ +|+++++..
T Consensus 198 --~----~~~~~~~~~l~~---~G~~v~~g~ 219 (302)
T 1iz0_A 198 --G----KEVEESLGLLAH---GGRLVYIGA 219 (302)
T ss_dssp --C----TTHHHHHTTEEE---EEEEEEC--
T ss_pred --H----HHHHHHHHhhcc---CCEEEEEeC
Confidence 1 236778889999 788877654
No 410
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=51.45 E-value=95 Score=25.56 Aligned_cols=66 Identities=18% Similarity=0.252 Sum_probs=41.9
Q ss_pred CCeEEEEcCCccHHHHHHHHHC--CCCeEEEeech-H----HHhcCCCCCCeEEEEcCCCC-CCCCceEEEeccc
Q 023384 119 LGSLVDVGGGNGSLSRIISEAF--PGIKCTVLDLP-H----VVANLPEADNLKYIAGDMFQ-FIPPADAFLFKLV 185 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~~-~----~~~~a~~~~rv~~~~~d~~~-~~p~~D~v~~~~v 185 (283)
..+||=.| |+|.++..+++++ .+.++++++.. . .+.......++.++.+|..+ .+...|+|+....
T Consensus 27 ~~~vlVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vih~A~ 100 (343)
T 2b69_A 27 RKRILITG-GAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLAS 100 (343)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCS
T ss_pred CCEEEEEc-CccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChhhcCCCEEEECcc
Confidence 36787665 5777777766654 25678888762 1 11111114578999999988 4556888876544
No 411
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=51.17 E-value=15 Score=32.49 Aligned_cols=105 Identities=16% Similarity=0.215 Sum_probs=57.1
Q ss_pred CCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------------------CCCeEEEEcCCCCCCCCce
Q 023384 119 LGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------------------ADNLKYIAGDMFQFIPPAD 178 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------------------~~rv~~~~~d~~~~~p~~D 178 (283)
..+|-=||.|.=.+..+++-+..+.+++++|+ ++.++..++ ..|++|.. |..+.+...|
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt-~~~~ai~~ad 99 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAE-SAEEAVAATD 99 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECS-SHHHHHHTSS
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEc-CHHHHHhcCC
Confidence 46788888775444333322223678999999 766655432 23333321 1111122468
Q ss_pred EEEeccc--c--cCCCh-hHHHHHHHHHHHhhccCCCCcEEEEEeeecCCCc
Q 023384 179 AFLFKLV--F--HGLGD-EDGLKILKKRRAAIASNGERGKVIIIDIVINAEE 225 (283)
Q Consensus 179 ~v~~~~v--l--h~~~d-~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~ 225 (283)
+++++-- + +.-+| .......+.+.+.|++ +..|.++|.+...+..-
T Consensus 100 ~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~-~~~g~lVV~eSTVppGt 150 (444)
T 3vtf_A 100 ATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRA-KGRWHLVVVKSTVPPGT 150 (444)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHH-HCSCCEEEECSCCCTTT
T ss_pred ceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhh-cCCCeEEEEeCCCCCch
Confidence 7766421 1 11111 2355667888888886 11367888887766543
No 412
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=51.04 E-value=27 Score=28.81 Aligned_cols=86 Identities=19% Similarity=0.195 Sum_probs=48.5
Q ss_pred CeEEEEcCCccHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCCCCCceEEEecccccCCCh-hHHH
Q 023384 120 GSLVDVGGGNGSLSRIISEAF--PGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLGD-EDGL 195 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~d-~~~~ 195 (283)
.+|.=||+|. .+..+++.+ .+.+++++|. ++.++...+.. +.....|..+-....|+|++.- ++ ....
T Consensus 8 ~~I~iIG~G~--mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g-~~~~~~~~~e~~~~aDvvi~~v-----p~~~~~~ 79 (303)
T 3g0o_A 8 FHVGIVGLGS--MGMGAARSCLRAGLSTWGADLNPQACANLLAEG-ACGAAASAREFAGVVDALVILV-----VNAAQVR 79 (303)
T ss_dssp CEEEEECCSH--HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-CSEEESSSTTTTTTCSEEEECC-----SSHHHHH
T ss_pred CeEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcC-CccccCCHHHHHhcCCEEEEEC-----CCHHHHH
Confidence 5788887763 333332221 2568999998 66655543321 2122334443345689998854 43 3445
Q ss_pred HHH---HHHHHhhccCCCCcEEEEE
Q 023384 196 KIL---KKRRAAIASNGERGKVIII 217 (283)
Q Consensus 196 ~iL---~~~~~~L~p~~~gg~lli~ 217 (283)
.++ +.+.+.++| |.++|.
T Consensus 80 ~v~~~~~~l~~~l~~----g~ivv~ 100 (303)
T 3g0o_A 80 QVLFGEDGVAHLMKP----GSAVMV 100 (303)
T ss_dssp HHHC--CCCGGGSCT----TCEEEE
T ss_pred HHHhChhhHHhhCCC----CCEEEe
Confidence 555 666778887 555553
No 413
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=50.84 E-value=47 Score=29.15 Aligned_cols=90 Identities=12% Similarity=0.053 Sum_probs=55.7
Q ss_pred cCCCCeEEEEcC--CccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEE---cCCC-----------------
Q 023384 116 FEGLGSLVDVGG--GNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIA---GDMF----------------- 171 (283)
Q Consensus 116 ~~~~~~vlDvGg--G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~---~d~~----------------- 171 (283)
.....+||=+|+ |.|.++..+++.. +.++++.+. ++.++.+++ ... .++. .|+.
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~lGa~-~vi~~~~~d~~~~~~~~~~~~~~~~~~~ 303 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRAMGAE-AIIDRNAEGYRFWKDENTQDPKEWKRFG 303 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCC-EEEETTTTTCCSEEETTEECHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHhhCCc-EEEecCcCcccccccccccchHHHHHHH
Confidence 556688999985 6788888888876 568777776 655655543 111 1111 1110
Q ss_pred C---C-C--CCceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 172 Q---F-I--PPADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 172 ~---~-~--p~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
+ . . ..+|+++-.. .. ..++...++|++ ||+++++-.
T Consensus 304 ~~i~~~t~g~g~Dvvid~~-----G~----~~~~~~~~~l~~---~G~iv~~G~ 345 (456)
T 3krt_A 304 KRIRELTGGEDIDIVFEHP-----GR----ETFGASVFVTRK---GGTITTCAS 345 (456)
T ss_dssp HHHHHHHTSCCEEEEEECS-----CH----HHHHHHHHHEEE---EEEEEESCC
T ss_pred HHHHHHhCCCCCcEEEEcC-----Cc----hhHHHHHHHhhC---CcEEEEEec
Confidence 0 0 1 2488877533 22 357788889999 798887653
No 414
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=50.58 E-value=23 Score=28.97 Aligned_cols=87 Identities=13% Similarity=0.070 Sum_probs=51.3
Q ss_pred CeEEEEcCCc-c-HHHHHHHHHC-CCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCCCCCceEEEecccccCCChhHHH
Q 023384 120 GSLVDVGGGN-G-SLSRIISEAF-PGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLGDEDGL 195 (283)
Q Consensus 120 ~~vlDvGgG~-G-~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~~~ 195 (283)
.+|.=||||. | .++..+++.. +..++++.|. ++..+...+.-++... .|..+.....|+|++.- +++...
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~-~~~~~~~~~aDvVilav-----~p~~~~ 77 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTT-QDNRQGALNADVVVLAV-----KPHQIK 77 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEE-SCHHHHHSSCSEEEECS-----CGGGHH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEe-CChHHHHhcCCeEEEEe-----CHHHHH
Confidence 5688888863 2 2333344432 2237899998 6665554332234322 22222234589998854 556678
Q ss_pred HHHHHHHHh-hccCCCCcEEEE
Q 023384 196 KILKKRRAA-IASNGERGKVII 216 (283)
Q Consensus 196 ~iL~~~~~~-L~p~~~gg~lli 216 (283)
.+++++... +++ +.++|
T Consensus 78 ~vl~~l~~~~l~~----~~iii 95 (280)
T 3tri_A 78 MVCEELKDILSET----KILVI 95 (280)
T ss_dssp HHHHHHHHHHHTT----TCEEE
T ss_pred HHHHHHHhhccCC----CeEEE
Confidence 899999988 886 55555
No 415
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=50.17 E-value=1.1e+02 Score=26.16 Aligned_cols=91 Identities=18% Similarity=0.140 Sum_probs=50.3
Q ss_pred CCCCeEEEEcCCcc-HHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCCCCCceEEEecccccCCChhHH
Q 023384 117 EGLGSLVDVGGGNG-SLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLGDEDG 194 (283)
Q Consensus 117 ~~~~~vlDvGgG~G-~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~~ 194 (283)
...++|+=-|+|+- ......+..-++.-..++|. |.-.-.--.+.++.++.-+..... ..|.|++..--+ .
T Consensus 317 ~~gk~v~~yGa~~~g~~l~~~~~~~~~~i~~~~D~~~~k~g~~~~g~~ipi~~p~~~~~~-~~d~vl~~~~~~------~ 389 (416)
T 4e2x_A 317 AEGRSVVGYGATAKSATVTNFCGIGPDLVHSVYDTTPDKQNRLTPGAHIPVRPASAFSDP-YPDYALLFAWNH------A 389 (416)
T ss_dssp HTTCCEEEECCCSHHHHHHHHHTCCTTTSCCEEESCGGGTTEECTTTCCEEEEGGGCCSS-CCSEEEESCGGG------H
T ss_pred HcCCeEEEEccccHHHHHHHhcCCCcceeeEEEeCCccccCccCCCCCCcCCCHHHHhhc-CCCEEEEecchh------H
Confidence 45678988887753 33333343333432345665 433322222556877776655431 246555432211 3
Q ss_pred HHHHHHHHHhhccCCCCcEEEEE
Q 023384 195 LKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 195 ~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
.+|++++.....- ||++++-
T Consensus 390 ~ei~~~~~~~~~~---g~~~~~~ 409 (416)
T 4e2x_A 390 EEIMAKEQEFHQA---GGRWILY 409 (416)
T ss_dssp HHHHHHCHHHHHT---TCEEEEC
T ss_pred HHHHHHHHHHHhc---CCEEEEE
Confidence 4678888777776 7998763
No 416
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=50.10 E-value=93 Score=24.58 Aligned_cols=98 Identities=13% Similarity=0.179 Sum_probs=55.2
Q ss_pred CCeEEEEcCC--ccH---HHHHHHHHCCCCeEEEeec-hHHHhcC----CC--CCCeEEEEcCCCCC--C----------
Q 023384 119 LGSLVDVGGG--NGS---LSRIISEAFPGIKCTVLDL-PHVVANL----PE--ADNLKYIAGDMFQF--I---------- 174 (283)
Q Consensus 119 ~~~vlDvGgG--~G~---~~~~l~~~~p~~~~~~~D~-~~~~~~a----~~--~~rv~~~~~d~~~~--~---------- 174 (283)
.+++|=.|++ +|. ++..|+++ +.++++.+. ....+.. ++ ..++.++..|+.++ +
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEA--GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 3677878765 222 33344444 678888876 3211111 11 34799999999873 1
Q ss_pred -CCceEEEecccc----------cCCChhHHH-----------HHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 175 -PPADAFLFKLVF----------HGLGDEDGL-----------KILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 175 -p~~D~v~~~~vl----------h~~~d~~~~-----------~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
+..|+++....+ .+.+.++.. .+++.+.+.|++ +|+++.+....
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~ 150 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE---GGSIVTLTYLG 150 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGG
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC---CceEEEEeccc
Confidence 135777765432 223333322 355666677776 68888777544
No 417
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=49.92 E-value=1.1e+02 Score=25.39 Aligned_cols=89 Identities=11% Similarity=0.075 Sum_probs=57.4
Q ss_pred cCCCCeEEEEcC--CccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEcCCCC-C--------C--CCceEE
Q 023384 116 FEGLGSLVDVGG--GNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAGDMFQ-F--------I--PPADAF 180 (283)
Q Consensus 116 ~~~~~~vlDvGg--G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~-~--------~--p~~D~v 180 (283)
+....+||-+|+ |.|..+..+++.. +.++++.|. ++..+.+++ ... .++ |..+ + . ..+|++
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~ga~-~~~--d~~~~~~~~~~~~~~~~~~~d~v 239 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKALGAD-ETV--NYTHPDWPKEVRRLTGGKGADKV 239 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCS-EEE--ETTSTTHHHHHHHHTTTTCEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCCC-EEE--cCCcccHHHHHHHHhCCCCceEE
Confidence 556789999996 6888888888876 468999987 655554433 111 122 2221 1 1 148888
Q ss_pred EecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 181 LFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 181 ~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
+-..- . ..++.+.++|++ +|+++++...
T Consensus 240 i~~~g-~--------~~~~~~~~~l~~---~G~~v~~g~~ 267 (343)
T 2eih_A 240 VDHTG-A--------LYFEGVIKATAN---GGRIAIAGAS 267 (343)
T ss_dssp EESSC-S--------SSHHHHHHHEEE---EEEEEESSCC
T ss_pred EECCC-H--------HHHHHHHHhhcc---CCEEEEEecC
Confidence 76543 1 236778889999 7888876643
No 418
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=49.88 E-value=68 Score=27.56 Aligned_cols=95 Identities=17% Similarity=0.099 Sum_probs=55.0
Q ss_pred cCCCCeEEEEcCC-ccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEc---CCCCC----CC--CceEEEecc
Q 023384 116 FEGLGSLVDVGGG-NGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAG---DMFQF----IP--PADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGgG-~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~---d~~~~----~p--~~D~v~~~~ 184 (283)
.....+||=+|+| .|.++..+++..-..++++.|. ++..+.+++..--.++.. |+.+. .+ .+|+++-.-
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~ 290 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEAT 290 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECC
Confidence 4566789889875 4788888888764448999997 666665554111111211 11110 11 488887543
Q ss_pred cccCCChhHHHHHHHHHHHhh----ccCCCCcEEEEEeee
Q 023384 185 VFHGLGDEDGLKILKKRRAAI----ASNGERGKVIIIDIV 220 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L----~p~~~gg~lli~d~~ 220 (283)
..+. ..+..+.++| ++ +|+++++-..
T Consensus 291 -----g~~~--~~~~~~~~~l~~~~~~---~G~iv~~G~~ 320 (404)
T 3ip1_A 291 -----GVPQ--LVWPQIEEVIWRARGI---NATVAIVARA 320 (404)
T ss_dssp -----SCHH--HHHHHHHHHHHHCSCC---CCEEEECSCC
T ss_pred -----CCcH--HHHHHHHHHHHhccCC---CcEEEEeCCC
Confidence 2221 2344445555 98 7998887654
No 419
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=49.09 E-value=33 Score=26.33 Aligned_cols=62 Identities=15% Similarity=0.077 Sum_probs=42.3
Q ss_pred eEEEEcCCccHHHHHHHHHCC--CCeEEEeec-hHHHhcCCCCCCeEEEEcCCCC-C------CCCceEEEecccc
Q 023384 121 SLVDVGGGNGSLSRIISEAFP--GIKCTVLDL-PHVVANLPEADNLKYIAGDMFQ-F------IPPADAFLFKLVF 186 (283)
Q Consensus 121 ~vlDvGgG~G~~~~~l~~~~p--~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~-~------~p~~D~v~~~~vl 186 (283)
+||=. ||+|..+..+++++- +.++++++. ++.... ..+++++.+|+.+ + +.+.|+++.....
T Consensus 2 ~ilIt-GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~ 73 (219)
T 3dqp_A 2 KIFIV-GSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ---YNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGS 73 (219)
T ss_dssp EEEEE-STTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC---CTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCC
T ss_pred eEEEE-CCCCHHHHHHHHHHHHCCCEEEEEECCccchhh---cCCceEEEecccCCHHHHHHHHcCCCEEEECCcC
Confidence 45644 467888888877763 468889988 433222 3689999999987 3 2357888875543
No 420
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=49.04 E-value=24 Score=29.60 Aligned_cols=55 Identities=16% Similarity=0.214 Sum_probs=35.9
Q ss_pred CCCeEEEEcCCCC---CCC--CceEEEeccccc-----CCCh-------hHHHHHHHHHHHhhccCCCCcEEEEE
Q 023384 160 ADNLKYIAGDMFQ---FIP--PADAFLFKLVFH-----GLGD-------EDGLKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 160 ~~rv~~~~~d~~~---~~p--~~D~v~~~~vlh-----~~~d-------~~~~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
..+..++.+|..+ .++ .+|+|++.=-.. ++.+ .....+|+.++++|+| ||.+++.
T Consensus 12 ~~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~---~G~i~i~ 83 (323)
T 1boo_A 12 TSNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKP---DGSFVVD 83 (323)
T ss_dssp CSSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEE---EEEEEEE
T ss_pred cCCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcC---CcEEEEE
Confidence 4567788888765 244 388888853322 1211 2456889999999999 6776664
No 421
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=48.88 E-value=48 Score=27.73 Aligned_cols=65 Identities=14% Similarity=0.091 Sum_probs=36.0
Q ss_pred CCeEEEEcCCccHHHHHHHHHCCCC-eEEEeec-hHHHhcC----CC-----CCCeEEEE-cCCCCCCCCceEEEecc
Q 023384 119 LGSLVDVGGGNGSLSRIISEAFPGI-KCTVLDL-PHVVANL----PE-----ADNLKYIA-GDMFQFIPPADAFLFKL 184 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a----~~-----~~rv~~~~-~d~~~~~p~~D~v~~~~ 184 (283)
..+|.=||+|+=..+.+.+-...+. .++++|+ ++.++.. .. ....++.. .|. +.+.++|+|+..-
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTA 80 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeC
Confidence 3578889986533333333333344 7899998 4433211 11 12333333 565 5666799998864
No 422
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=48.78 E-value=77 Score=25.55 Aligned_cols=67 Identities=15% Similarity=0.083 Sum_probs=40.6
Q ss_pred CCeEEEEcCCccHHHHHHHHHC--CCCeEEEeec-hHHHhc----CCC--CCCeEEEEcCCCCC-C-------------C
Q 023384 119 LGSLVDVGGGNGSLSRIISEAF--PGIKCTVLDL-PHVVAN----LPE--ADNLKYIAGDMFQF-I-------------P 175 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~----a~~--~~rv~~~~~d~~~~-~-------------p 175 (283)
.+++|=.|++ |..+.++++++ .+.++++.++ ++..+. .++ ..++.++..|+.++ . +
T Consensus 12 ~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g 90 (311)
T 3o26_A 12 RRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFG 90 (311)
T ss_dssp CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCC
Confidence 3566666654 55555555443 3678888887 333222 111 45899999999875 1 2
Q ss_pred CceEEEecccc
Q 023384 176 PADAFLFKLVF 186 (283)
Q Consensus 176 ~~D~v~~~~vl 186 (283)
..|+++.+.-+
T Consensus 91 ~iD~lv~nAg~ 101 (311)
T 3o26_A 91 KLDILVNNAGV 101 (311)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 46888776543
No 423
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=48.57 E-value=91 Score=25.58 Aligned_cols=84 Identities=23% Similarity=0.289 Sum_probs=47.1
Q ss_pred CeEEEEcCCc-cHHHHHHHHHCCCCeEE-Eeec-hHHHhcCCCCCCeEEEEcCCCC--CCCCceEEEecccccCCChhHH
Q 023384 120 GSLVDVGGGN-GSLSRIISEAFPGIKCT-VLDL-PHVVANLPEADNLKYIAGDMFQ--FIPPADAFLFKLVFHGLGDEDG 194 (283)
Q Consensus 120 ~~vlDvGgG~-G~~~~~l~~~~p~~~~~-~~D~-~~~~~~a~~~~rv~~~~~d~~~--~~p~~D~v~~~~vlh~~~d~~~ 194 (283)
.+|.=||||. |......+.+.|+.+.+ +.|. ++..+...+. +.. ..|+.+ .-+..|+|+..-. +..-
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~--~~~-~~~~~~~l~~~~~D~V~i~tp-----~~~h 82 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPG--CVI-ESDWRSVVSAPEVEAVIIATP-----PATH 82 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTT--CEE-ESSTHHHHTCTTCCEEEEESC-----GGGH
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhh--Ccc-cCCHHHHhhCCCCCEEEEeCC-----hHHH
Confidence 5789999985 44444445556887754 7787 6555544332 432 234333 1245898887542 2211
Q ss_pred HHHHHHHHHhhccCCCCcEEEEEe
Q 023384 195 LKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 195 ~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
..-+.++|+. |+-+++|
T Consensus 83 ---~~~~~~al~~----Gk~v~~e 99 (315)
T 3c1a_A 83 ---AEITLAAIAS----GKAVLVE 99 (315)
T ss_dssp ---HHHHHHHHHT----TCEEEEE
T ss_pred ---HHHHHHHHHC----CCcEEEc
Confidence 2333456776 6656666
No 424
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=48.24 E-value=65 Score=26.61 Aligned_cols=93 Identities=15% Similarity=0.177 Sum_probs=53.1
Q ss_pred CCeEEEEcCCccHHHHHHHHHC--CCCeEEEeechHHHhcCCCCCCeEEEEcCCCCC--C----CCceEEEecccccCCC
Q 023384 119 LGSLVDVGGGNGSLSRIISEAF--PGIKCTVLDLPHVVANLPEADNLKYIAGDMFQF--I----PPADAFLFKLVFHGLG 190 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~~~~~~~a~~~~rv~~~~~d~~~~--~----p~~D~v~~~~vlh~~~ 190 (283)
.++||=.| |+|..+..+++.+ .+.++++++.... ..++.++.+|+.++ + .+.|+|+.......++
T Consensus 19 ~~~vlVtG-atG~iG~~l~~~L~~~G~~V~~~~r~~~------~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~ 91 (347)
T 4id9_A 19 SHMILVTG-SAGRVGRAVVAALRTQGRTVRGFDLRPS------GTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMSWA 91 (347)
T ss_dssp --CEEEET-TTSHHHHHHHHHHHHTTCCEEEEESSCC------SSCCSEEESCTTCHHHHHHHHTTCSEEEECCCCCCSS
T ss_pred CCEEEEEC-CCChHHHHHHHHHHhCCCEEEEEeCCCC------CCCccEEecCcCCHHHHHHHHhCCCEEEECCcccCcc
Confidence 35677665 6777777766654 2567888887321 15788999999873 2 3578888766555444
Q ss_pred hhHH-------HHHHHHHHHhhccCCCCcEEEEEee
Q 023384 191 DEDG-------LKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 191 d~~~-------~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
..+. +.-..++.++++..+ .++++.+..
T Consensus 92 ~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~V~~SS 126 (347)
T 4id9_A 92 PADRDRMFAVNVEGTRRLLDAASAAG-VRRFVFASS 126 (347)
T ss_dssp GGGHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEE
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECC
Confidence 3321 112334444544311 246666654
No 425
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=48.21 E-value=5.2 Score=34.12 Aligned_cols=93 Identities=22% Similarity=0.195 Sum_probs=55.3
Q ss_pred cCCCCeEEEEcCC-ccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEc----CCCCCC-CCceEEEeccccc
Q 023384 116 FEGLGSLVDVGGG-NGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAG----DMFQFI-PPADAFLFKLVFH 187 (283)
Q Consensus 116 ~~~~~~vlDvGgG-~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~----d~~~~~-p~~D~v~~~~vlh 187 (283)
.....+||-+|+| .|..+..+++.. +.++++.|. ++..+.+++ ... .++.. |+.+.+ ..+|+++-..---
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~lGa~-~v~~~~~~~~~~~~~~~~~D~vid~~g~~ 254 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDAMKMGAD-HYIATLEEGDWGEKYFDTFDLIVVCASSL 254 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHTCS-EEEEGGGTSCHHHHSCSCEEEEEECCSCS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHcCCC-EEEcCcCchHHHHHhhcCCCEEEECCCCC
Confidence 5667899999964 578888888875 568888886 554544433 111 12221 211112 3589887644210
Q ss_pred CCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 188 GLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 188 ~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
+. ..++...++|++ ||+++++-.
T Consensus 255 --~~----~~~~~~~~~l~~---~G~iv~~g~ 277 (360)
T 1piw_A 255 --TD----IDFNIMPKAMKV---GGRIVSISI 277 (360)
T ss_dssp --TT----CCTTTGGGGEEE---EEEEEECCC
T ss_pred --cH----HHHHHHHHHhcC---CCEEEEecC
Confidence 01 224556778999 788887654
No 426
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=48.11 E-value=9.3 Score=31.77 Aligned_cols=88 Identities=11% Similarity=0.052 Sum_probs=52.9
Q ss_pred cCCCCeEEEEcCC-ccHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEEEcCCCCCCC-CceEEEecccccCCChhH
Q 023384 116 FEGLGSLVDVGGG-NGSLSRIISEAFPGIKCTVLDLPHVVANLPEADNLKYIAGDMFQFIP-PADAFLFKLVFHGLGDED 193 (283)
Q Consensus 116 ~~~~~~vlDvGgG-~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~rv~~~~~d~~~~~p-~~D~v~~~~vlh~~~d~~ 193 (283)
.....+||-+|+| .|.++..+++.. +.++++.+.++..+.+++..--.++ -| .+.++ .+|+++-.-- .+
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~lGa~~v~-~d-~~~v~~g~Dvv~d~~g-----~~- 210 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVSASLSQALAAKRGVRHLY-RE-PSQVTQKYFAIFDAVN-----SQ- 210 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSCCHHHHHHHTEEEEE-SS-GGGCCSCEEEEECC----------
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEEChhhHHHHHHcCCCEEE-cC-HHHhCCCccEEEECCC-----ch-
Confidence 5667899999975 588888888876 4588888754444444331111122 24 33344 4888875331 11
Q ss_pred HHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 194 GLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 194 ~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
.+....++|++ +|+++++-
T Consensus 211 ---~~~~~~~~l~~---~G~~v~~g 229 (315)
T 3goh_A 211 ---NAAALVPSLKA---NGHIICIQ 229 (315)
T ss_dssp ------TTGGGEEE---EEEEEEEC
T ss_pred ---hHHHHHHHhcC---CCEEEEEe
Confidence 13556789999 79988874
No 427
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=47.95 E-value=22 Score=29.91 Aligned_cols=88 Identities=17% Similarity=0.237 Sum_probs=48.3
Q ss_pred CeEEEEcCCc-cHHH-HHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEE-------------EcCCCCCCCCceEEEec
Q 023384 120 GSLVDVGGGN-GSLS-RIISEAFPGIKCTVLDL-PHVVANLPEADNLKYI-------------AGDMFQFIPPADAFLFK 183 (283)
Q Consensus 120 ~~vlDvGgG~-G~~~-~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~-------------~~d~~~~~p~~D~v~~~ 183 (283)
.+|.=||+|. |... ..+++. +.+++++|. ++.++..++...+.+. ..|..+....+|+|++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 82 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 82 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEe
Confidence 5788898875 3322 233332 467899998 6655543321112111 11111113358998885
Q ss_pred ccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 184 LVFHGLGDEDGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 184 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
-- ......+++.+.+.+++ +.+++..
T Consensus 83 v~-----~~~~~~~~~~l~~~l~~----~~~vv~~ 108 (359)
T 1bg6_A 83 VP-----AIHHASIAANIASYISE----GQLIILN 108 (359)
T ss_dssp SC-----GGGHHHHHHHHGGGCCT----TCEEEES
T ss_pred CC-----chHHHHHHHHHHHhCCC----CCEEEEc
Confidence 53 33345778888888988 5555544
No 428
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=47.83 E-value=31 Score=29.11 Aligned_cols=86 Identities=20% Similarity=0.206 Sum_probs=53.5
Q ss_pred CeEEEEcCC-ccHHH-HHHH-HHCCCCe-EEEeec-hH---HHhcCCCCCCeEEEEcCCCC-CC-------CCceEEEec
Q 023384 120 GSLVDVGGG-NGSLS-RIIS-EAFPGIK-CTVLDL-PH---VVANLPEADNLKYIAGDMFQ-FI-------PPADAFLFK 183 (283)
Q Consensus 120 ~~vlDvGgG-~G~~~-~~l~-~~~p~~~-~~~~D~-~~---~~~~a~~~~rv~~~~~d~~~-~~-------p~~D~v~~~ 183 (283)
.+||-+|+| .|.++ ..++ +.. +.+ +++.|. ++ ..+.+++.. ...+ |..+ ++ ..+|+++-.
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~lG-a~~v--~~~~~~~~~i~~~~gg~Dvvid~ 249 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEELD-ATYV--DSRQTPVEDVPDVYEQMDFIYEA 249 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHHTT-CEEE--ETTTSCGGGHHHHSCCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHHcC-Cccc--CCCccCHHHHHHhCCCCCEEEEC
Confidence 799999964 57777 7888 654 555 899988 54 455554311 2222 3322 11 147887754
Q ss_pred ccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 184 LVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 184 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
.- .+ ..++.+.++|++ +|+++++-..
T Consensus 250 ~g-----~~---~~~~~~~~~l~~---~G~iv~~g~~ 275 (357)
T 2b5w_A 250 TG-----FP---KHAIQSVQALAP---NGVGALLGVP 275 (357)
T ss_dssp SC-----CH---HHHHHHHHHEEE---EEEEEECCCC
T ss_pred CC-----Ch---HHHHHHHHHHhc---CCEEEEEeCC
Confidence 32 21 347788899999 7988877643
No 429
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=47.20 E-value=14 Score=31.07 Aligned_cols=92 Identities=11% Similarity=0.153 Sum_probs=56.3
Q ss_pred cCCCCeEEEEcC--CccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcC--CCCC----CC--CceEEEecc
Q 023384 116 FEGLGSLVDVGG--GNGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGD--MFQF----IP--PADAFLFKL 184 (283)
Q Consensus 116 ~~~~~~vlDvGg--G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d--~~~~----~p--~~D~v~~~~ 184 (283)
.....+||-+|+ |.|..+..+++.. +.++++.+. ++..+.+++..--.++..+ +.+. .+ .+|+++-+.
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~ 235 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPI 235 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECC
Confidence 556789999985 6788888888876 569999887 6555554431111122222 1111 11 488887644
Q ss_pred cccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 185 VFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 185 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
- . ..++.+.+.|++ +|+++++-..
T Consensus 236 g-----~----~~~~~~~~~l~~---~G~iv~~G~~ 259 (342)
T 4eye_A 236 G-----G----PAFDDAVRTLAS---EGRLLVVGFA 259 (342)
T ss_dssp C-----------CHHHHHHTEEE---EEEEEEC---
T ss_pred c-----h----hHHHHHHHhhcC---CCEEEEEEcc
Confidence 2 1 246778889999 7998887543
No 430
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=47.18 E-value=29 Score=29.94 Aligned_cols=88 Identities=17% Similarity=0.170 Sum_probs=46.5
Q ss_pred eEEEEcCCccHHHHHH-HHHCCCCeEEEee---c-hHHHhc-CCCCC---------C--eEE------EEcCCCCCCCCc
Q 023384 121 SLVDVGGGNGSLSRII-SEAFPGIKCTVLD---L-PHVVAN-LPEAD---------N--LKY------IAGDMFQFIPPA 177 (283)
Q Consensus 121 ~vlDvGgG~G~~~~~l-~~~~p~~~~~~~D---~-~~~~~~-a~~~~---------r--v~~------~~~d~~~~~p~~ 177 (283)
+|.=||+|.-..+.+. +.+..+.+++++| . ++.++. .++.. . +.. ...|..+....+
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a 83 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISGA 83 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHTTC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhCCC
Confidence 6778888653322222 2121356889999 6 555554 22211 1 110 111111112358
Q ss_pred eEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEE
Q 023384 178 DAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 178 D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
|+|++.- +......+++.+...++| +.+++.
T Consensus 84 D~Vilav-----~~~~~~~v~~~l~~~l~~----~~ivv~ 114 (404)
T 3c7a_A 84 DVVILTV-----PAFAHEGYFQAMAPYVQD----SALIVG 114 (404)
T ss_dssp SEEEECS-----CGGGHHHHHHHHTTTCCT----TCEEEE
T ss_pred CEEEEeC-----chHHHHHHHHHHHhhCCC----CcEEEE
Confidence 9988854 334456788888888887 455554
No 431
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=46.94 E-value=1.5e+02 Score=26.21 Aligned_cols=124 Identities=15% Similarity=0.109 Sum_probs=66.4
Q ss_pred CCCeEEEEc-CCccHHH-HHHHHHCCCCeEEEeec--hHHHhcCCCCCCeEEEEcCCCCCCCCceEEEecccccCCChhH
Q 023384 118 GLGSLVDVG-GGNGSLS-RIISEAFPGIKCTVLDL--PHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLGDED 193 (283)
Q Consensus 118 ~~~~vlDvG-gG~G~~~-~~l~~~~p~~~~~~~D~--~~~~~~a~~~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~ 193 (283)
..++|+=|| ||+|..+ ..++.+ -+.++++.|. +...+..+ ...+++..|.-.+.+.++|+|+.+-.+.. +.+
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~-~G~~V~~~D~~~~~~~~~l~-~~gi~~~~g~~~~~~~~~d~vV~Spgi~~-~~p- 96 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLAN-EGYQISGSDLAPNSVTQHLT-ALGAQIYFHHRPENVLDASVVVVSTAISA-DNP- 96 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHH-TTCEEEEECSSCCHHHHHHH-HTTCEEESSCCGGGGTTCSEEEECTTSCT-TCH-
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHh-CCCeEEEEECCCCHHHHHHH-HCCCEEECCCCHHHcCCCCEEEECCCCCC-CCH-
Confidence 347899998 6678753 333333 3789999997 22222222 23566666522223456899999887642 122
Q ss_pred HHHHHHHHHHhhccCCCCcEEEEEeeecCCCccchhhhhhhhhc-ccccccc--cCCccCCHHHHHHHHHHCCCCe
Q 023384 194 GLKILKKRRAAIASNGERGKVIIIDIVINAEEEEHELTETKFLF-DIVMSVN--ATGKERTESEWAKLFFDACFSH 266 (283)
Q Consensus 194 ~~~iL~~~~~~L~p~~~gg~lli~d~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~t~~e~~~ll~~aGf~~ 266 (283)
.++.++ +. |.-++.+.-+ ..... ....... ++||-=|.+-+..+|+++|++.
T Consensus 97 ---~~~~a~---~~----gi~v~~~~e~-----------l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~~~ 151 (494)
T 4hv4_A 97 ---EIVAAR---EA----RIPVIRRAEM-----------LAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEAGLDP 151 (494)
T ss_dssp ---HHHHHH---HT----TCCEEEHHHH-----------HHHHHTTSEEEEEECSSSHHHHHHHHHHHHHHTTCCC
T ss_pred ---HHHHHH---HC----CCCEEcHHHH-----------HHHHhcCCCEEEEecCCChHHHHHHHHHHHHhcCCCC
Confidence 233332 22 3334433110 00111 1112223 4577767788899999999864
No 432
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=46.36 E-value=78 Score=26.55 Aligned_cols=91 Identities=16% Similarity=0.150 Sum_probs=55.6
Q ss_pred cCCCCeEEEEcC--CccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCC---C----CC--CceEEEec
Q 023384 116 FEGLGSLVDVGG--GNGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQ---F----IP--PADAFLFK 183 (283)
Q Consensus 116 ~~~~~~vlDvGg--G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~---~----~p--~~D~v~~~ 183 (283)
+....+||-.|+ |.|..+..+++.. +.++++.|. ++..+.+++...-..+..+-.+ . .. .+|+++-+
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~ 246 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEM 246 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEES
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEEC
Confidence 556789999995 6788888888875 568999987 5555544331111122211111 0 01 47888754
Q ss_pred ccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 184 LVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 184 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
.- . ..+....++|++ +|+++++-.
T Consensus 247 ~G-----~----~~~~~~~~~l~~---~G~iv~~g~ 270 (351)
T 1yb5_A 247 LA-----N----VNLSKDLSLLSH---GGRVIVVGS 270 (351)
T ss_dssp CH-----H----HHHHHHHHHEEE---EEEEEECCC
T ss_pred CC-----h----HHHHHHHHhccC---CCEEEEEec
Confidence 32 1 246778899999 799887763
No 433
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=46.32 E-value=16 Score=30.67 Aligned_cols=91 Identities=15% Similarity=0.208 Sum_probs=54.7
Q ss_pred cCCCCeEEEEcCC--ccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEc---CCCCC----CC--CceEEEe
Q 023384 116 FEGLGSLVDVGGG--NGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAG---DMFQF----IP--PADAFLF 182 (283)
Q Consensus 116 ~~~~~~vlDvGgG--~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~---d~~~~----~p--~~D~v~~ 182 (283)
+....+||-+|+| .|..+..+++.. +.++++.|. ++..+.+++ .... .+.. |+.+. .. .+|+++-
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lga~~-~~~~~~~~~~~~~~~~~~~~g~Dvvid 219 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLRLGAAY-VIDTSTAPLYETVMELTNGIGADAAID 219 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHTCSE-EEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhCCCcE-EEeCCcccHHHHHHHHhCCCCCcEEEE
Confidence 5667899999876 688888888865 568999887 554444443 1111 1211 11110 11 4888876
Q ss_pred cccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 183 KLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 183 ~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
+. ..+. +....++|++ +|+++++-..
T Consensus 220 ~~-----g~~~----~~~~~~~l~~---~G~iv~~G~~ 245 (340)
T 3gms_A 220 SI-----GGPD----GNELAFSLRP---NGHFLTIGLL 245 (340)
T ss_dssp SS-----CHHH----HHHHHHTEEE---EEEEEECCCT
T ss_pred CC-----CChh----HHHHHHHhcC---CCEEEEEeec
Confidence 43 2322 2334478999 7998887653
No 434
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=46.15 E-value=72 Score=22.13 Aligned_cols=62 Identities=11% Similarity=0.154 Sum_probs=37.8
Q ss_pred CeEEEEcCCccHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCC-------CCCceEEEecc
Q 023384 120 GSLVDVGGGNGSLSRIISEAF--PGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQF-------IPPADAFLFKL 184 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~-------~p~~D~v~~~~ 184 (283)
.+|+=+|+ |..+..+++.+ .+.+++++|. ++..+.+++ ....++.+|..++ ...+|+++..-
T Consensus 7 ~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~-~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~ 78 (144)
T 2hmt_A 7 KQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS-YATHAVIANATEENELLSLGIRNFEYVIVAI 78 (144)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT-TCSEEEECCTTCHHHHHTTTGGGCSEEEECC
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hCCEEEEeCCCCHHHHHhcCCCCCCEEEECC
Confidence 56888886 55555444432 2467888888 666665543 2345677777642 22488887644
No 435
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=45.98 E-value=32 Score=30.10 Aligned_cols=95 Identities=12% Similarity=0.058 Sum_probs=49.5
Q ss_pred eEEEEcCCccHHH--HHHHHHCCCCeEEEeec-hHHHhcCCC-------------------CCCeEEEEcCCCCCCCCce
Q 023384 121 SLVDVGGGNGSLS--RIISEAFPGIKCTVLDL-PHVVANLPE-------------------ADNLKYIAGDMFQFIPPAD 178 (283)
Q Consensus 121 ~vlDvGgG~G~~~--~~l~~~~p~~~~~~~D~-~~~~~~a~~-------------------~~rv~~~~~d~~~~~p~~D 178 (283)
+|.=||+|.=... ..++++ +.+++++|. ++.++..++ ..++.+ ..|..+....+|
T Consensus 2 kI~VIG~G~vG~~~A~~la~~--G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~-t~~~~~~~~~aD 78 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG-TTDFKKAVLDSD 78 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHHHTCS
T ss_pred EEEEECCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEE-eCCHHHHhccCC
Confidence 5667887743322 233333 568999998 666654432 113332 122211123579
Q ss_pred EEEecccccC----CCh-hHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 179 AFLFKLVFHG----LGD-EDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 179 ~v~~~~vlh~----~~d-~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
+|+++---.. -+| .....+++.+.+.|++++ ++.++|...
T Consensus 79 vviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~-~~~iVV~~S 123 (436)
T 1mv8_A 79 VSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKS-ERHTVVVRS 123 (436)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCC-SCCEEEECS
T ss_pred EEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccC-CCcEEEEeC
Confidence 8887542111 001 115677888888888611 266666553
No 436
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=45.82 E-value=20 Score=30.09 Aligned_cols=66 Identities=20% Similarity=0.289 Sum_probs=45.6
Q ss_pred CCeEEEEcCCccHHHHHHHHHCCC----CeEEEeechHHHhcCCCCCCeEEEEcCCCC-C-C-------CCceEEEeccc
Q 023384 119 LGSLVDVGGGNGSLSRIISEAFPG----IKCTVLDLPHVVANLPEADNLKYIAGDMFQ-F-I-------PPADAFLFKLV 185 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~p~----~~~~~~D~~~~~~~a~~~~rv~~~~~d~~~-~-~-------p~~D~v~~~~v 185 (283)
...||=+|++.|.....|.+.||+ ++++++|...-....+...+|+++.. +++ . . .+.++++++.+
T Consensus 76 g~~VVYaGsAPG~HI~fL~~lF~~l~~~lkwvLiDp~~f~~~Le~~~ni~li~~-ffde~~i~~l~~~~~~~~vLfISDI 154 (348)
T 1vpt_A 76 GATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPILNGLRDVTLVTR-FVDEEYLRSIKKQLHPSKIILISDV 154 (348)
T ss_dssp TCEEEEESCSSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGGGTTCTTEEEEEC-CCCHHHHHHHHHHHTTSCEEEEECC
T ss_pred CCeEEEeCcCCcchHHHHHHHhhhcCCceEEEEECCCchhhhhcCCCcEEeehh-hcCHHHHHHHHHHhcCCCEEEEEec
Confidence 359999999999999999888875 89999997433333333456776664 554 2 1 12477777665
No 437
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=45.75 E-value=44 Score=28.61 Aligned_cols=91 Identities=19% Similarity=0.178 Sum_probs=57.5
Q ss_pred CCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec--hHH-H-hcCCC----CCCeEEEEcCCCCCCC-CceEEEecccccC
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL--PHV-V-ANLPE----ADNLKYIAGDMFQFIP-PADAFLFKLVFHG 188 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~--~~~-~-~~a~~----~~rv~~~~~d~~~~~p-~~D~v~~~~vlh~ 188 (283)
...+||.|+-+.|.++..++...| ..+.|. ... + .+.+. .+++++.. -.++.+ .+|++++...
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~~~---~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~lp--- 109 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEHKP---YSIGDSYISELATRENLRLNGIDESSVKFLD--STADYPQQPGVVLIKVP--- 109 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGGCC---EEEESCHHHHHHHHHHHHHTTCCGGGSEEEE--TTSCCCSSCSEEEEECC---
T ss_pred CCCCEEEECCCCCHHHHhhccCCc---eEEEhHHHHHHHHHHHHHHcCCCccceEecc--cccccccCCCEEEEEcC---
Confidence 346899999999999998876533 233564 211 1 11111 23466543 233334 5999888443
Q ss_pred CChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 189 LGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 189 ~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
-+.......|+++...|+| |+.+++...
T Consensus 110 k~~~~l~~~L~~l~~~l~~---~~~i~~~g~ 137 (375)
T 4dcm_A 110 KTLALLEQQLRALRKVVTS---DTRIIAGAK 137 (375)
T ss_dssp SCHHHHHHHHHHHHTTCCT---TSEEEEEEE
T ss_pred CCHHHHHHHHHHHHhhCCC---CCEEEEEec
Confidence 1345677889999999998 788877665
No 438
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=45.57 E-value=22 Score=29.70 Aligned_cols=86 Identities=14% Similarity=0.111 Sum_probs=47.1
Q ss_pred CeEEEEcCCc-cHHHHHHHHHCCCCeEE-Eeec-hHHHhcCCCCCCeEEEEcCCCC--CCCCceEEEecccccCCChhHH
Q 023384 120 GSLVDVGGGN-GSLSRIISEAFPGIKCT-VLDL-PHVVANLPEADNLKYIAGDMFQ--FIPPADAFLFKLVFHGLGDEDG 194 (283)
Q Consensus 120 ~~vlDvGgG~-G~~~~~l~~~~p~~~~~-~~D~-~~~~~~a~~~~rv~~~~~d~~~--~~p~~D~v~~~~vlh~~~d~~~ 194 (283)
.+|.=||||. |......+.+.|+.+++ +.|. ++..+...+.-.+. ..|+.+ .-++.|+|++.-. +..-
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~D~V~i~tp-----~~~h 76 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE--VRTIDAIEAAADIDAVVICTP-----TDTH 76 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE--ECCHHHHHHCTTCCEEEECSC-----GGGH
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC--cCCHHHHhcCCCCCEEEEeCC-----chhH
Confidence 4678899975 44444455567888876 6787 55544333222333 233333 1346899887552 2211
Q ss_pred HHHHHHHHHhhccCCCCcEEEEEee
Q 023384 195 LKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 195 ~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
..-+.++|+. |+-+++|-
T Consensus 77 ---~~~~~~al~~----gk~v~~EK 94 (331)
T 4hkt_A 77 ---ADLIERFARA----GKAIFCEK 94 (331)
T ss_dssp ---HHHHHHHHHT----TCEEEECS
T ss_pred ---HHHHHHHHHc----CCcEEEec
Confidence 2334456665 55566663
No 439
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=45.38 E-value=1.6e+02 Score=25.82 Aligned_cols=95 Identities=20% Similarity=0.231 Sum_probs=52.7
Q ss_pred CeEEEEcCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------------------CCCeEEEEcCCCCCCCCceE
Q 023384 120 GSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-------------------ADNLKYIAGDMFQFIPPADA 179 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------------------~~rv~~~~~d~~~~~p~~D~ 179 (283)
.++-=||.|.=....+.+-+--+.+++++|+ ++.++..++ ..++.+.. | ...+|+
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~tt-d----~~~aDv 86 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVST-T----PEASDV 86 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEES-S----CCCCSE
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeC-c----hhhCCE
Confidence 4555667664333332222223678999999 776655433 12344332 3 235888
Q ss_pred EEecccccC-------CChhHHHHHHHHHHHhhccCCCCcEEEEEeeecCC
Q 023384 180 FLFKLVFHG-------LGDEDGLKILKKRRAAIASNGERGKVIIIDIVINA 223 (283)
Q Consensus 180 v~~~~vlh~-------~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~~~ 223 (283)
|+++-.-.. .+-.......+.+.+.|++ |.++|.+...+.
T Consensus 87 vii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~----g~iVV~~STV~p 133 (431)
T 3ojo_A 87 FIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKK----GNTIIVESTIAP 133 (431)
T ss_dssp EEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCT----TEEEEECSCCCT
T ss_pred EEEEeCCCccccccCCccHHHHHHHHHHHHHhCCC----CCEEEEecCCCh
Confidence 887532211 1112355667888888998 677777655543
No 440
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=44.68 E-value=33 Score=29.19 Aligned_cols=80 Identities=13% Similarity=0.188 Sum_probs=46.7
Q ss_pred CeEEEEcCCccHH--HHHHHHHCCCCeEEEeec-hHHHhcCCC-------------CCCeEEEEcCCCCCCCCceEEEec
Q 023384 120 GSLVDVGGGNGSL--SRIISEAFPGIKCTVLDL-PHVVANLPE-------------ADNLKYIAGDMFQFIPPADAFLFK 183 (283)
Q Consensus 120 ~~vlDvGgG~G~~--~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------------~~rv~~~~~d~~~~~p~~D~v~~~ 183 (283)
.+|.=||+|.=.. +..++++ +.++++.|. ++.++..++ ..++.+ ..|..+...++|+|++.
T Consensus 30 mkI~VIGaG~mG~alA~~La~~--G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~-t~d~~ea~~~aDvVila 106 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK--GQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKA-YCDLKASLEGVTDILIV 106 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT--TCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEE-ESCHHHHHTTCCEEEEC
T ss_pred CeEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEE-ECCHHHHHhcCCEEEEC
Confidence 5788898864222 2223332 457888888 565443322 112222 12222223358998885
Q ss_pred ccccCCChhHHHHHHHHHHHhhcc
Q 023384 184 LVFHGLGDEDGLKILKKRRAAIAS 207 (283)
Q Consensus 184 ~vlh~~~d~~~~~iL~~~~~~L~p 207 (283)
- +......+++++...++|
T Consensus 107 V-----p~~~~~~vl~~i~~~l~~ 125 (356)
T 3k96_A 107 V-----PSFAFHEVITRMKPLIDA 125 (356)
T ss_dssp C-----CHHHHHHHHHHHGGGCCT
T ss_pred C-----CHHHHHHHHHHHHHhcCC
Confidence 3 566778889999999988
No 441
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=44.62 E-value=32 Score=30.42 Aligned_cols=64 Identities=16% Similarity=0.137 Sum_probs=41.7
Q ss_pred CCeEEEEcCCccHHHHH-HHHHCCCCeEEEeec--hHHHhcCCCCCCeEEEEcCCCC-CCCCceEEEec
Q 023384 119 LGSLVDVGGGNGSLSRI-ISEAFPGIKCTVLDL--PHVVANLPEADNLKYIAGDMFQ-FIPPADAFLFK 183 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~-l~~~~p~~~~~~~D~--~~~~~~a~~~~rv~~~~~d~~~-~~p~~D~v~~~ 183 (283)
..+||=||||.-..... ++.+ -+.+++++|. .+.+....+..+++++.+++.. ++.++|+|+.+
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~-~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~a 79 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLE-AGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAA 79 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccEEEEc
Confidence 47899999996555543 3333 3567888875 2222222223578999988876 56678988874
No 442
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=43.66 E-value=50 Score=27.52 Aligned_cols=85 Identities=12% Similarity=0.114 Sum_probs=52.3
Q ss_pred CCeEEEEcCCccHHHHHHHHHCC--CCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCC-------CCCceEEEecccccC
Q 023384 119 LGSLVDVGGGNGSLSRIISEAFP--GIKCTVLDL-PHVVANLPEADNLKYIAGDMFQF-------IPPADAFLFKLVFHG 188 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~p--~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~-------~p~~D~v~~~~vlh~ 188 (283)
..+|+=+|+ |..+..+++..- +. ++++|. ++.++ ++ ...+.++.||..++ ..++|.++...-
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~-~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~--- 186 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VL-RSGANFVHGDPTRVSDLEKANVRGARAVIVDLE--- 186 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH-HTTCEEEESCTTSHHHHHHTCSTTEEEEEECCS---
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH-hCCcEEEEeCCCCHHHHHhcChhhccEEEEcCC---
Confidence 357888876 677777776542 34 888998 66666 43 35688999998873 235888877431
Q ss_pred CChhHHHHHHHHHHHhhccCCCCcEEEE
Q 023384 189 LGDEDGLKILKKRRAAIASNGERGKVII 216 (283)
Q Consensus 189 ~~d~~~~~iL~~~~~~L~p~~~gg~lli 216 (283)
+|+....+. ...+.+.| ..+++.
T Consensus 187 -~d~~n~~~~-~~ar~~~~---~~~iia 209 (336)
T 1lnq_A 187 -SDSETIHCI-LGIRKIDE---SVRIIA 209 (336)
T ss_dssp -SHHHHHHHH-HHHHTTCT---TSEEEE
T ss_pred -ccHHHHHHH-HHHHHHCC---CCeEEE
Confidence 344434333 34455666 345544
No 443
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=43.01 E-value=11 Score=31.99 Aligned_cols=83 Identities=20% Similarity=0.242 Sum_probs=47.7
Q ss_pred CeEEEEcCCc-cH-HHHHHHHHCCCCeEEEeec-hHH-HhcCCCCCCeEEEEcCCCCCCCCceEEEecccccCCChhHHH
Q 023384 120 GSLVDVGGGN-GS-LSRIISEAFPGIKCTVLDL-PHV-VANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLGDEDGL 195 (283)
Q Consensus 120 ~~vlDvGgG~-G~-~~~~l~~~~p~~~~~~~D~-~~~-~~~a~~~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~~~ 195 (283)
.+|.=||+|. |. ++..+.+. +.++++.|. ++. .+.+.+ ..+... |..+....+|+|++.- ++....
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~--G~~V~~~~~~~~~~~~~a~~-~G~~~~--~~~e~~~~aDvVilav-----p~~~~~ 86 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDS--GVDVTVGLRSGSATVAKAEA-HGLKVA--DVKTAVAAADVVMILT-----PDEFQG 86 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--TCCEEEECCTTCHHHHHHHH-TTCEEE--CHHHHHHTCSEEEECS-----CHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHC--cCEEEEEECChHHHHHHHHH-CCCEEc--cHHHHHhcCCEEEEeC-----CcHHHH
Confidence 5788898875 22 22333332 457888887 332 333332 123322 3222233589998844 566667
Q ss_pred HHHH-HHHHhhccCCCCcEEEE
Q 023384 196 KILK-KRRAAIASNGERGKVII 216 (283)
Q Consensus 196 ~iL~-~~~~~L~p~~~gg~lli 216 (283)
.+++ ++...|+| |.+++
T Consensus 87 ~v~~~~i~~~l~~----~~ivi 104 (338)
T 1np3_A 87 RLYKEEIEPNLKK----GATLA 104 (338)
T ss_dssp HHHHHHTGGGCCT----TCEEE
T ss_pred HHHHHHHHhhCCC----CCEEE
Confidence 7887 88888888 55555
No 444
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=42.90 E-value=31 Score=28.62 Aligned_cols=92 Identities=16% Similarity=0.068 Sum_probs=57.3
Q ss_pred cCCCCeEEEEc--CCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCC---C----C--CCceEEEec
Q 023384 116 FEGLGSLVDVG--GGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQ---F----I--PPADAFLFK 183 (283)
Q Consensus 116 ~~~~~~vlDvG--gG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~---~----~--p~~D~v~~~ 183 (283)
.....+||-+| ||.|..+..+++.. +.++++.|. ++..+.+++..--..+..+-.+ . . ..+|+++-+
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~ 216 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDG 216 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEES
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEEC
Confidence 55678999998 56788888888875 568999987 6655555441111122211111 0 1 148888764
Q ss_pred ccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 184 LVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 184 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
.- . ..+....+.|++ +|+++++-..
T Consensus 217 ~g-----~----~~~~~~~~~l~~---~G~iv~~g~~ 241 (325)
T 3jyn_A 217 VG-----Q----DTWLTSLDSVAP---RGLVVSFGNA 241 (325)
T ss_dssp SC-----G----GGHHHHHTTEEE---EEEEEECCCT
T ss_pred CC-----h----HHHHHHHHHhcC---CCEEEEEecC
Confidence 32 2 246678889999 7998887643
No 445
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=42.90 E-value=22 Score=30.69 Aligned_cols=87 Identities=10% Similarity=0.013 Sum_probs=53.3
Q ss_pred CeEEEEcCCccHHHHHHHHHCCCCeEE-Eeec-hHHHhcCCCCCCeEEEEcCCCCCCC-CceEEEecccccCCCh----h
Q 023384 120 GSLVDVGGGNGSLSRIISEAFPGIKCT-VLDL-PHVVANLPEADNLKYIAGDMFQFIP-PADAFLFKLVFHGLGD----E 192 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~p~~~~~-~~D~-~~~~~~a~~~~rv~~~~~d~~~~~p-~~D~v~~~~vlh~~~d----~ 192 (283)
.+||+++-+-|.++..+. |..+++ +.|. +......+.+-++.+ .+-.++.| .||++++. |+. .
T Consensus 47 ~~~l~~n~~~g~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~d~v~~~-----~Pk~k~~~ 116 (381)
T 3dmg_A 47 ERALDLNPGVGWGSLPLE---GRMAVERLETSRAAFRCLTASGLQARL--ALPWEAAAGAYDLVVLA-----LPAGRGTA 116 (381)
T ss_dssp SEEEESSCTTSTTTGGGB---TTBEEEEEECBHHHHHHHHHTTCCCEE--CCGGGSCTTCEEEEEEE-----CCGGGCHH
T ss_pred CcEEEecCCCCccccccC---CCCceEEEeCcHHHHHHHHHcCCCccc--cCCccCCcCCCCEEEEE-----CCcchhHH
Confidence 689999999998876654 334444 4565 443332221222222 22222333 49998884 452 3
Q ss_pred HHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 193 DGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 193 ~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
.+...|.++.+.|+| ||.|++.-.
T Consensus 117 ~~~~~l~~~~~~l~~---g~~i~~~g~ 140 (381)
T 3dmg_A 117 YVQASLVAAARALRM---GGRLYLAGD 140 (381)
T ss_dssp HHHHHHHHHHHHEEE---EEEEEEEEE
T ss_pred HHHHHHHHHHHhCCC---CCEEEEEEc
Confidence 467889999999999 788877663
No 446
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=42.38 E-value=12 Score=31.89 Aligned_cols=89 Identities=11% Similarity=0.159 Sum_probs=53.4
Q ss_pred CCeEEEEcCC-ccHHHHHHHHHCCCCeEEEeec-h---HHHhcCCCCCCeEEEEc-CCCCCC----CCceEEEecccccC
Q 023384 119 LGSLVDVGGG-NGSLSRIISEAFPGIKCTVLDL-P---HVVANLPEADNLKYIAG-DMFQFI----PPADAFLFKLVFHG 188 (283)
Q Consensus 119 ~~~vlDvGgG-~G~~~~~l~~~~p~~~~~~~D~-~---~~~~~a~~~~rv~~~~~-d~~~~~----p~~D~v~~~~vlh~ 188 (283)
..+||-+|+| .|..+..+++.. +.++++.|. + +..+.+++. ....+.. |+.+.+ ..+|+++-..-.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~~~-ga~~v~~~~~~~~~~~~~~~~d~vid~~g~-- 256 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-GLEVWMANRREPTEVEQTVIEET-KTNYYNSSNGYDKLKDSVGKFDVIIDATGA-- 256 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-TCEEEEEESSCCCHHHHHHHHHH-TCEEEECTTCSHHHHHHHCCEEEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCccchHHHHHHHHh-CCceechHHHHHHHHHhCCCCCEEEECCCC--
Confidence 6899999974 466777777765 458999998 5 555544431 1111111 221111 248888764431
Q ss_pred CChhHHHHHH-HHHHHhhccCCCCcEEEEEeee
Q 023384 189 LGDEDGLKIL-KKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 189 ~~d~~~~~iL-~~~~~~L~p~~~gg~lli~d~~ 220 (283)
. ..+ +.+.+.|++ +|+++++...
T Consensus 257 ---~---~~~~~~~~~~l~~---~G~iv~~g~~ 280 (366)
T 2cdc_A 257 ---D---VNILGNVIPLLGR---NGVLGLFGFS 280 (366)
T ss_dssp ---C---THHHHHHGGGEEE---EEEEEECSCC
T ss_pred ---h---HHHHHHHHHHHhc---CCEEEEEecC
Confidence 1 135 778889999 7888877643
No 447
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=41.64 E-value=24 Score=30.73 Aligned_cols=31 Identities=26% Similarity=0.557 Sum_probs=25.8
Q ss_pred CeEEEEcCCccHHHHH--HHHHCCCCeEEEeec
Q 023384 120 GSLVDVGGGNGSLSRI--ISEAFPGIKCTVLDL 150 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~--l~~~~p~~~~~~~D~ 150 (283)
++||=||+|.|.++.+ |.+..|+.+++++|.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~ 35 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISD 35 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcC
Confidence 5899999999886654 667788999999985
No 448
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=41.59 E-value=45 Score=27.90 Aligned_cols=40 Identities=18% Similarity=0.243 Sum_probs=32.8
Q ss_pred CCCCeEEEEcCCccHHHHHHHHHCCCCeEEEeec-h---HHHhcCC
Q 023384 117 EGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDL-P---HVVANLP 158 (283)
Q Consensus 117 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~-~---~~~~~a~ 158 (283)
.....|||-=||+|..+.+..+. +-+++++|+ + ..++.+.
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~~~~~~~~~~~ 284 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAPVFKEYYQKQL 284 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHH--TCEEEEEESSTHHHHHHHHHH
T ss_pred CCCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCccHHHHHHHHH
Confidence 45679999999999999998887 678999999 6 5555543
No 449
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=41.00 E-value=28 Score=29.55 Aligned_cols=87 Identities=11% Similarity=0.012 Sum_probs=48.6
Q ss_pred CeEEEEcCCc-cHH-HHHHHHHCCCCeEE-Eeec-hHHHhcCCC-CCCeEEEEcCCCC--CCCCceEEEecccccCCChh
Q 023384 120 GSLVDVGGGN-GSL-SRIISEAFPGIKCT-VLDL-PHVVANLPE-ADNLKYIAGDMFQ--FIPPADAFLFKLVFHGLGDE 192 (283)
Q Consensus 120 ~~vlDvGgG~-G~~-~~~l~~~~p~~~~~-~~D~-~~~~~~a~~-~~rv~~~~~d~~~--~~p~~D~v~~~~vlh~~~d~ 192 (283)
.+|.=||||. |.. ....+.+.|+.+++ ++|. ++..+...+ ...+.. ..|+.+ .-++.|+|++.. ++.
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~-~~~~~~ll~~~~vD~V~i~t-----p~~ 79 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPV-LDNVPAMLNQVPLDAVVMAG-----PPQ 79 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCE-ESSHHHHHHHSCCSEEEECS-----CHH
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcc-cCCHHHHhcCCCCCEEEEcC-----CcH
Confidence 5788899997 652 34445667888876 6788 665555433 122221 223332 123468888754 222
Q ss_pred HHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 193 DGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 193 ~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
.- ..-+.++|+. |+=+++|-
T Consensus 80 ~H---~~~~~~al~a----GkhVl~EK 99 (359)
T 3m2t_A 80 LH---FEMGLLAMSK----GVNVFVEK 99 (359)
T ss_dssp HH---HHHHHHHHHT----TCEEEECS
T ss_pred HH---HHHHHHHHHC----CCeEEEEC
Confidence 21 3344566775 66666663
No 450
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=40.99 E-value=38 Score=27.34 Aligned_cols=83 Identities=10% Similarity=-0.043 Sum_probs=45.4
Q ss_pred eEEEEcCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCCCCCceEEEecccccCCChh-HHHHH
Q 023384 121 SLVDVGGGN-GSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLGDE-DGLKI 197 (283)
Q Consensus 121 ~vlDvGgG~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~d~-~~~~i 197 (283)
+|.=||+|. |......+.+ +.++++.|. ++..+...+. .+... +..+....+|+|++.- +.. ....+
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~--g~~V~~~~~~~~~~~~~~~~-g~~~~--~~~~~~~~~D~vi~~v-----~~~~~~~~v 72 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR--RFPTLVWNRTFEKALRHQEE-FGSEA--VPLERVAEARVIFTCL-----PTTREVYEV 72 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT--TSCEEEECSSTHHHHHHHHH-HCCEE--CCGGGGGGCSEEEECC-----SSHHHHHHH
T ss_pred eEEEEcccHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHC-CCccc--CHHHHHhCCCEEEEeC-----CChHHHHHH
Confidence 577788775 3332222223 567889998 5554433221 12121 2111234589988754 333 35567
Q ss_pred HHHHHHhhccCCCCcEEEEE
Q 023384 198 LKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 198 L~~~~~~L~p~~~gg~lli~ 217 (283)
++.+.+.+++ |.+++.
T Consensus 73 ~~~l~~~l~~----~~~vv~ 88 (289)
T 2cvz_A 73 AEALYPYLRE----GTYWVD 88 (289)
T ss_dssp HHHHTTTCCT----TEEEEE
T ss_pred HHHHHhhCCC----CCEEEE
Confidence 7778788887 555553
No 451
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=40.97 E-value=68 Score=26.90 Aligned_cols=99 Identities=16% Similarity=0.132 Sum_probs=50.3
Q ss_pred CCeEEEEcCCccHHHHHHHHHCCCC-eEEEeec-hHHHhc-CCC--------CCCeEEE-EcCCCCCCCCceEEEecccc
Q 023384 119 LGSLVDVGGGNGSLSRIISEAFPGI-KCTVLDL-PHVVAN-LPE--------ADNLKYI-AGDMFQFIPPADAFLFKLVF 186 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~-a~~--------~~rv~~~-~~d~~~~~p~~D~v~~~~vl 186 (283)
..+|.=||+|.=..+.+.+-...++ +++++|+ ++.++. +.. ..+.++. ..|. +.+.++|+|++..-.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaag~ 85 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTAGV 85 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEccCc
Confidence 3578889886533333332223344 8999998 433321 100 1233444 3554 556679999886432
Q ss_pred cCCC---h----hHHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 187 HGLG---D----EDGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 187 h~~~---d----~~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
-.-+ . .....+++.+.+.++...|.+.++++.
T Consensus 86 p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt 124 (324)
T 3gvi_A 86 PRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT 124 (324)
T ss_dssp CCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred CCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence 1111 1 123455666655553211257777765
No 452
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=40.68 E-value=1.2e+02 Score=25.21 Aligned_cols=87 Identities=14% Similarity=0.109 Sum_probs=47.0
Q ss_pred CeEEEEcCCc-cHHHHHHHHHCCCCeEE-Eeec-hHHHhcCCCCCCeEEEEcCCCC--CCCCceEEEecccccCCChhHH
Q 023384 120 GSLVDVGGGN-GSLSRIISEAFPGIKCT-VLDL-PHVVANLPEADNLKYIAGDMFQ--FIPPADAFLFKLVFHGLGDEDG 194 (283)
Q Consensus 120 ~~vlDvGgG~-G~~~~~l~~~~p~~~~~-~~D~-~~~~~~a~~~~rv~~~~~d~~~--~~p~~D~v~~~~vlh~~~d~~~ 194 (283)
.+|.=||||. |......+.+.|+.+++ +.|. ++..+...+.-.+.. ..|+.+ .-+..|+|++.-. +..-
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~-~~~~~~~l~~~~~D~V~i~tp-----~~~h 78 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEA-VASPDEVFARDDIDGIVIGSP-----TSTH 78 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEE-ESSHHHHTTCSCCCEEEECSC-----GGGH
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCce-eCCHHHHhcCCCCCEEEEeCC-----chhh
Confidence 4788899975 44444445567888876 6787 555443222112332 234333 1235899887552 2222
Q ss_pred HHHHHHHHHhhccCCCCcEEEEEee
Q 023384 195 LKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 195 ~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
..-+.++|+. |+-+++|-
T Consensus 79 ---~~~~~~al~~----gk~v~~EK 96 (344)
T 3euw_A 79 ---VDLITRAVER----GIPALCEK 96 (344)
T ss_dssp ---HHHHHHHHHT----TCCEEECS
T ss_pred ---HHHHHHHHHc----CCcEEEEC
Confidence 2334456665 55566663
No 453
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=40.65 E-value=41 Score=27.77 Aligned_cols=63 Identities=17% Similarity=0.326 Sum_probs=41.1
Q ss_pred eEEEEcCCccHHHHHHHHHC---CCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCC---CC----CceEEEecc
Q 023384 121 SLVDVGGGNGSLSRIISEAF---PGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQF---IP----PADAFLFKL 184 (283)
Q Consensus 121 ~vlDvGgG~G~~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~---~p----~~D~v~~~~ 184 (283)
+||=. ||+|..+..+++++ ++.++++++. +..........+++++.+|+.++ +. +.|+|+...
T Consensus 2 ~vlVt-GatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A 75 (345)
T 2bll_A 2 RVLIL-GVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLV 75 (345)
T ss_dssp EEEEE-TCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECB
T ss_pred eEEEE-CCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcc
Confidence 45544 56788877776654 4678999987 44333322346899999999863 21 368877654
No 454
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=40.49 E-value=1.4e+02 Score=24.05 Aligned_cols=98 Identities=12% Similarity=0.108 Sum_probs=57.1
Q ss_pred CCeEEEEcCCcc-----HHHHHHHHHCCCCeEEEeech-HHHhcCC----CCCCeEEEEcCCCCC--C-----------C
Q 023384 119 LGSLVDVGGGNG-----SLSRIISEAFPGIKCTVLDLP-HVVANLP----EADNLKYIAGDMFQF--I-----------P 175 (283)
Q Consensus 119 ~~~vlDvGgG~G-----~~~~~l~~~~p~~~~~~~D~~-~~~~~a~----~~~rv~~~~~d~~~~--~-----------p 175 (283)
.+++|=.|++.| ..+..|+++ +.++++.+.. ...+..+ +..++.++..|+.++ + +
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREA--GAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG 108 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHT--TCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 367888887633 233344444 5778888873 2222111 135688999999873 1 2
Q ss_pred CceEEEeccccc----------CCChhHH-----------HHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 176 PADAFLFKLVFH----------GLGDEDG-----------LKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 176 ~~D~v~~~~vlh----------~~~d~~~-----------~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
..|+++.+.-+. ..+.++. ..+++.+.+.|+. +|+++.+....
T Consensus 109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~Iv~isS~~ 172 (293)
T 3grk_A 109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD---GGSILTLTYYG 172 (293)
T ss_dssp CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT---CEEEEEEECGG
T ss_pred CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCEEEEEeehh
Confidence 368877655332 3333332 3355667777776 68888776543
No 455
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=40.40 E-value=17 Score=30.22 Aligned_cols=87 Identities=14% Similarity=0.158 Sum_probs=43.8
Q ss_pred CeEEEEcCCc-cH-HHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCCC-CCceEEEecccccCCChhHHH
Q 023384 120 GSLVDVGGGN-GS-LSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQFI-PPADAFLFKLVFHGLGDEDGL 195 (283)
Q Consensus 120 ~~vlDvGgG~-G~-~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~~-p~~D~v~~~~vlh~~~d~~~~ 195 (283)
.+|.=||||. |. .....+.+.|+.++++.|. ++..+...+.-.+.....|..+.+ ++.|+|++.-. +..-
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp-----~~~h- 76 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAA-----TDVH- 76 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSC-----GGGH-
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECC-----chhH-
Confidence 3677788874 32 1223334557778778888 555443222111111112333323 45899888653 2211
Q ss_pred HHHHHHHHhhccCCCCcEEEEEe
Q 023384 196 KILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 196 ~iL~~~~~~L~p~~~gg~lli~d 218 (283)
..-+.++|+. |+-+++|
T Consensus 77 --~~~~~~al~~----Gk~V~~E 93 (323)
T 1xea_A 77 --STLAAFFLHL----GIPTFVD 93 (323)
T ss_dssp --HHHHHHHHHT----TCCEEEE
T ss_pred --HHHHHHHHHC----CCeEEEe
Confidence 2333456776 6655566
No 456
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=39.92 E-value=26 Score=29.48 Aligned_cols=65 Identities=15% Similarity=0.307 Sum_probs=43.3
Q ss_pred CeEEEEcCCccHHHHHHHHHC---CCCeEEEeec-hHHHhcCCCCCCeEEEEcCCC-CC--CC----CceEEEeccc
Q 023384 120 GSLVDVGGGNGSLSRIISEAF---PGIKCTVLDL-PHVVANLPEADNLKYIAGDMF-QF--IP----PADAFLFKLV 185 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~-~~--~p----~~D~v~~~~v 185 (283)
.+||=.| |+|..+..+++++ ++.++++++. ++.........+++++.+|+. ++ +. +.|+|+-...
T Consensus 25 ~~vlVtG-atG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~ 100 (372)
T 3slg_A 25 KKVLILG-VNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVA 100 (372)
T ss_dssp CEEEEES-CSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBC
T ss_pred CEEEEEC-CCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCc
Confidence 5788664 6777777776654 5678999998 433333222478999999998 52 21 4788876443
No 457
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=39.92 E-value=47 Score=27.40 Aligned_cols=86 Identities=19% Similarity=0.178 Sum_probs=53.7
Q ss_pred eEEEEcC--CccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEcC--CCCCC--CCceEEEecccccCCChh
Q 023384 121 SLVDVGG--GNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAGD--MFQFI--PPADAFLFKLVFHGLGDE 192 (283)
Q Consensus 121 ~vlDvGg--G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d--~~~~~--p~~D~v~~~~vlh~~~d~ 192 (283)
+||=+|+ |.|..+..+++.. +.++++.+. ++..+.+++ .....+-..+ ..... ..+|+++-.- ..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~-----g~- 221 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTV-----GD- 221 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESS-----CH-
T ss_pred eEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECC-----Cc-
Confidence 4888884 6888999999886 459999886 655555543 1111111111 11111 2478766432 22
Q ss_pred HHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 193 DGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 193 ~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
..++.+.++|++ +|+++++-.
T Consensus 222 ---~~~~~~~~~l~~---~G~iv~~G~ 242 (324)
T 3nx4_A 222 ---KVLAKVLAQMNY---GGCVAACGL 242 (324)
T ss_dssp ---HHHHHHHHTEEE---EEEEEECCC
T ss_pred ---HHHHHHHHHHhc---CCEEEEEec
Confidence 268888999999 799888754
No 458
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=39.59 E-value=32 Score=28.57 Aligned_cols=89 Identities=10% Similarity=0.021 Sum_probs=55.6
Q ss_pred cCCCCeEEEEc--CCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEcCCCC-C--------C-C-CceEE
Q 023384 116 FEGLGSLVDVG--GGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAGDMFQ-F--------I-P-PADAF 180 (283)
Q Consensus 116 ~~~~~~vlDvG--gG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~-~--------~-p-~~D~v 180 (283)
+....+||-.| ||.|..+..+++.. +.++++.|. ++..+.+++ .... .+ |..+ + . . .+|++
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~g~~~-~~--~~~~~~~~~~~~~~~~~~~~D~v 213 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALKAGAWQ-VI--NYREEDLVERLKEITGGKKVRVV 213 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHTCSE-EE--ETTTSCHHHHHHHHTTTCCEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCE-EE--ECCCccHHHHHHHHhCCCCceEE
Confidence 55678999998 56777777777765 468889887 555444433 1111 12 2211 1 1 1 37888
Q ss_pred EecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 181 LFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 181 ~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
+-+.- . ..++.+.+.|++ +|+++++-..
T Consensus 214 i~~~g-----~----~~~~~~~~~l~~---~G~iv~~g~~ 241 (327)
T 1qor_A 214 YDSVG-----R----DTWERSLDCLQR---RGLMVSFGNS 241 (327)
T ss_dssp EECSC-----G----GGHHHHHHTEEE---EEEEEECCCT
T ss_pred EECCc-----h----HHHHHHHHHhcC---CCEEEEEecC
Confidence 76542 2 346788889999 7988877643
No 459
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=38.79 E-value=16 Score=27.45 Aligned_cols=37 Identities=27% Similarity=0.344 Sum_probs=27.4
Q ss_pred EEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCC
Q 023384 122 LVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLP 158 (283)
Q Consensus 122 vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~ 158 (283)
.-=+.||||.=....+.++|+++...+--+.....++
T Consensus 64 ~GIliCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar 100 (162)
T 2vvp_A 64 LGIVLGGSGNGEQIAANKVPGARCALAWSVQTAALAR 100 (162)
T ss_dssp EEEEEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHH
T ss_pred eEEEEeCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHH
Confidence 4446799999888899999999987665555544444
No 460
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=38.50 E-value=31 Score=29.11 Aligned_cols=91 Identities=18% Similarity=0.161 Sum_probs=56.6
Q ss_pred cCCCCeEEEEc--CCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEcCCCC---CC-----CCceEEEec
Q 023384 116 FEGLGSLVDVG--GGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAGDMFQ---FI-----PPADAFLFK 183 (283)
Q Consensus 116 ~~~~~~vlDvG--gG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~---~~-----p~~D~v~~~ 183 (283)
.....+||-+| ||.|..+..+++.. +.++++.|. ++..+.+++ ... ..+..+-.+ .+ ..+|+++-+
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lGa~-~~~~~~~~~~~~~~~~~~~~g~Dvvid~ 242 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACERLGAK-RGINYRSEDFAAVIKAETGQGVDIILDM 242 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCS-EEEETTTSCHHHHHHHHHSSCEEEEEES
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCC-EEEeCCchHHHHHHHHHhCCCceEEEEC
Confidence 55678999995 45788888888876 568999997 665555544 111 112211111 00 148888764
Q ss_pred ccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 184 LVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 184 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
.- .+ .++...+.|++ +|+++++-..
T Consensus 243 ~g-----~~----~~~~~~~~l~~---~G~iv~~g~~ 267 (353)
T 4dup_A 243 IG-----AA----YFERNIASLAK---DGCLSIIAFL 267 (353)
T ss_dssp CC-----GG----GHHHHHHTEEE---EEEEEECCCT
T ss_pred CC-----HH----HHHHHHHHhcc---CCEEEEEEec
Confidence 42 22 46778889999 7988877543
No 461
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=38.11 E-value=77 Score=26.19 Aligned_cols=93 Identities=15% Similarity=0.157 Sum_probs=45.8
Q ss_pred eEEEEcCCccHHHHHHH-HHC-CCCeEEEeec-hHHHhcC-----CC----CCCeEEEE-cCCCCCCCCceEEEeccccc
Q 023384 121 SLVDVGGGNGSLSRIIS-EAF-PGIKCTVLDL-PHVVANL-----PE----ADNLKYIA-GDMFQFIPPADAFLFKLVFH 187 (283)
Q Consensus 121 ~vlDvGgG~G~~~~~l~-~~~-p~~~~~~~D~-~~~~~~a-----~~----~~rv~~~~-~d~~~~~p~~D~v~~~~vlh 187 (283)
+|.=||+|.=..+.+.. ... -..+++++|+ ++.++.. .. ....++.. .|.. .+.++|+|++.--..
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~-~l~~aDvViiav~~p 80 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYA-DTANSDIVIITAGLP 80 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGG-GGTTCSEEEECCSCC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHH-HHCCCCEEEEeCCCC
Confidence 57778876433333322 221 2567999998 4433321 10 12233333 4543 356789998876433
Q ss_pred CCCh---hH----HHHHHHHHHHhh---ccCCCCcEEEEE
Q 023384 188 GLGD---ED----GLKILKKRRAAI---ASNGERGKVIII 217 (283)
Q Consensus 188 ~~~d---~~----~~~iL~~~~~~L---~p~~~gg~lli~ 217 (283)
.-+. .+ ...+++.+.+.+ .| .+.++++
T Consensus 81 ~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~---~~~viv~ 117 (310)
T 1guz_A 81 RKPGMTREDLLMKNAGIVKEVTDNIMKHSK---NPIIIVV 117 (310)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHHCS---SCEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCC---CcEEEEE
Confidence 2221 11 234444444443 34 4777765
No 462
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=38.01 E-value=46 Score=27.88 Aligned_cols=86 Identities=9% Similarity=0.132 Sum_probs=48.2
Q ss_pred CeEEEEcCCc-cH-HHHH-HHHHCCCCeEE-Eeec-hHHHhcCCCCCCeEEEEcCCCC--CCCCceEEEecccccCCChh
Q 023384 120 GSLVDVGGGN-GS-LSRI-ISEAFPGIKCT-VLDL-PHVVANLPEADNLKYIAGDMFQ--FIPPADAFLFKLVFHGLGDE 192 (283)
Q Consensus 120 ~~vlDvGgG~-G~-~~~~-l~~~~p~~~~~-~~D~-~~~~~~a~~~~rv~~~~~d~~~--~~p~~D~v~~~~vlh~~~d~ 192 (283)
.+|.=||||. |. +... ++...|+.+++ ++|. ++..+.+.+...+.. ..|+.+ .-++.|+|++...-+
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~-~~~~~~ll~~~~~D~V~i~tp~~----- 76 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHF-TSDLDEVLNDPDVKLVVVCTHAD----- 76 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEE-ESCTHHHHTCTTEEEEEECSCGG-----
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCce-ECCHHHHhcCCCCCEEEEcCChH-----
Confidence 3677889886 43 2344 55667888877 6777 443333333223332 234443 234589988755321
Q ss_pred HHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 193 DGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 193 ~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
.- ..-+.++|+. |+-+++|
T Consensus 77 ~h---~~~~~~al~a----Gk~Vl~E 95 (345)
T 3f4l_A 77 SH---FEYAKRALEA----GKNVLVE 95 (345)
T ss_dssp GH---HHHHHHHHHT----TCEEEEC
T ss_pred HH---HHHHHHHHHc----CCcEEEe
Confidence 11 2334567776 6777777
No 463
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=38.00 E-value=93 Score=25.48 Aligned_cols=65 Identities=14% Similarity=0.225 Sum_probs=39.2
Q ss_pred CeEEEEcCCccHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCC------CCCceEEEecccc
Q 023384 120 GSLVDVGGGNGSLSRIISEAF--PGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQF------IPPADAFLFKLVF 186 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~------~p~~D~v~~~~vl 186 (283)
.+||=.| |+|..+..+++.+ .+.++++++. +...+... ..+++++.+|+.++ +.+.|+|+.....
T Consensus 14 M~ilVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~ 87 (342)
T 2x4g_A 14 VKYAVLG-ATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA-YLEPECRVAEMLDHAGLERALRGLDGVIFSAGY 87 (342)
T ss_dssp CEEEEES-TTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG-GGCCEEEECCTTCHHHHHHHTTTCSEEEEC---
T ss_pred CEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc-cCCeEEEEecCCCHHHHHHHHcCCCEEEECCcc
Confidence 4677665 5677777766544 3568888887 32222111 23788999999872 2357888765543
No 464
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=37.92 E-value=69 Score=26.87 Aligned_cols=90 Identities=9% Similarity=0.002 Sum_probs=55.1
Q ss_pred cCCCCeEEEEc--CCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEEcCCCC---C----C--CCceEEEe
Q 023384 116 FEGLGSLVDVG--GGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE-ADNLKYIAGDMFQ---F----I--PPADAFLF 182 (283)
Q Consensus 116 ~~~~~~vlDvG--gG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~rv~~~~~d~~~---~----~--p~~D~v~~ 182 (283)
+....+||-.| ||.|..+..+++.. +.++++.|. ++.++.+++ .... .+..+-.+ . . ..+|+++-
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~ 237 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEKLGAAA-GFNYKKEDFSEATLKFTKGAGVNLILD 237 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcE-EEecCChHHHHHHHHHhcCCCceEEEE
Confidence 55668999998 56788888888875 568999987 555554433 1111 12111111 0 1 14788876
Q ss_pred cccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 183 KLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 183 ~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
+.- .+ .++...+.|++ +|+++++-.
T Consensus 238 ~~G-----~~----~~~~~~~~l~~---~G~iv~~G~ 262 (354)
T 2j8z_A 238 CIG-----GS----YWEKNVNCLAL---DGRWVLYGL 262 (354)
T ss_dssp SSC-----GG----GHHHHHHHEEE---EEEEEECCC
T ss_pred CCC-----ch----HHHHHHHhccC---CCEEEEEec
Confidence 442 22 36677889999 798887764
No 465
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=37.71 E-value=1.3e+02 Score=23.66 Aligned_cols=89 Identities=12% Similarity=0.122 Sum_probs=47.4
Q ss_pred CCccHHHHHHHHHCC----CCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCC------CCCceEEEecccccCCChhHHH
Q 023384 127 GGNGSLSRIISEAFP----GIKCTVLDL-PHVVANLPEADNLKYIAGDMFQF------IPPADAFLFKLVFHGLGDEDGL 195 (283)
Q Consensus 127 gG~G~~~~~l~~~~p----~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~------~p~~D~v~~~~vlh~~~d~~~~ 195 (283)
||+|..+..+++.+- +.++++++. ++...... ..++.++.+|+.++ +.+.|+++...... .+ ...
T Consensus 6 GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~--~~-~~~ 81 (286)
T 2zcu_A 6 GATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA-AQGITVRQADYGDEAALTSALQGVEKLLLISSSE--VG-QRA 81 (286)
T ss_dssp STTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH-HTTCEEEECCTTCHHHHHHHTTTCSEEEECC-----------
T ss_pred cCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh-cCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCC--ch-HHH
Confidence 567888888776642 567888887 32211110 24688999999872 23578887654321 11 123
Q ss_pred HHHHHHHHhhccCCCCcEEEEEeee
Q 023384 196 KILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 196 ~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
...+++.++++..+ -++++.+...
T Consensus 82 ~~~~~l~~a~~~~~-~~~~v~~Ss~ 105 (286)
T 2zcu_A 82 PQHRNVINAAKAAG-VKFIAYTSLL 105 (286)
T ss_dssp CHHHHHHHHHHHHT-CCEEEEEEET
T ss_pred HHHHHHHHHHHHcC-CCEEEEECCC
Confidence 33455555554311 2466666543
No 466
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=37.66 E-value=1.5e+02 Score=23.31 Aligned_cols=100 Identities=13% Similarity=0.078 Sum_probs=56.1
Q ss_pred CeEEEEcCCccHHHHHHHHHC--CCCeEEEeec-hHHHhcCC-----CCCCeEEEEcCCCCC--C------------CCc
Q 023384 120 GSLVDVGGGNGSLSRIISEAF--PGIKCTVLDL-PHVVANLP-----EADNLKYIAGDMFQF--I------------PPA 177 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~-----~~~rv~~~~~d~~~~--~------------p~~ 177 (283)
+++|=.|+ +|....++++++ .+.++++.|. ++..+... ...++.++..|+.++ . ...
T Consensus 10 k~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i 88 (260)
T 2ae2_A 10 CTALVTGG-SRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKL 88 (260)
T ss_dssp CEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCC
T ss_pred CEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 56776654 555555555543 3678888887 44332211 145788899999873 1 346
Q ss_pred eEEEeccccc------CCChhHHH-----------HHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 178 DAFLFKLVFH------GLGDEDGL-----------KILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 178 D~v~~~~vlh------~~~d~~~~-----------~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
|+++...-.. +.+.++.. .+++.+.+.|+..+ +|+++.+....
T Consensus 89 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~ 148 (260)
T 2ae2_A 89 NILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVS 148 (260)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGG
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchh
Confidence 8877655432 23333322 24555566664312 47777776543
No 467
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=37.57 E-value=52 Score=27.45 Aligned_cols=88 Identities=11% Similarity=0.000 Sum_probs=46.2
Q ss_pred CCeEEEEcCCc-cHHHHHHHH-HCCCCeEE-Eeec-hHHHhcCCCCCCeEEEEcCCCC--CCCCceEEEecccccCCChh
Q 023384 119 LGSLVDVGGGN-GSLSRIISE-AFPGIKCT-VLDL-PHVVANLPEADNLKYIAGDMFQ--FIPPADAFLFKLVFHGLGDE 192 (283)
Q Consensus 119 ~~~vlDvGgG~-G~~~~~l~~-~~p~~~~~-~~D~-~~~~~~a~~~~rv~~~~~d~~~--~~p~~D~v~~~~vlh~~~d~ 192 (283)
..+|.=||||. |......+. +.|+.+++ +.|. ++..+...+.-.+.....|+.+ .-++.|+|+.... +.
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp-----~~ 82 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAP-----TP 82 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSC-----GG
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCC-----hH
Confidence 35799999974 443333344 67888754 6687 5554332211112112233333 1235899887642 22
Q ss_pred HHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 193 DGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 193 ~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
.- ...+.++|+. |+-+++|
T Consensus 83 ~h---~~~~~~al~~----G~~v~~e 101 (346)
T 3cea_A 83 FH---PEMTIYAMNA----GLNVFCE 101 (346)
T ss_dssp GH---HHHHHHHHHT----TCEEEEC
T ss_pred hH---HHHHHHHHHC----CCEEEEc
Confidence 11 3334466776 6666666
No 468
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=37.30 E-value=1.6e+02 Score=24.74 Aligned_cols=62 Identities=13% Similarity=0.164 Sum_probs=38.4
Q ss_pred CCeEEEEcCCccHHHHHHHHHC-CCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCC------CCCceEEEecc
Q 023384 119 LGSLVDVGGGNGSLSRIISEAF-PGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQF------IPPADAFLFKL 184 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~------~p~~D~v~~~~ 184 (283)
..+|+=|||| ..+..+++.. .+..+++.|+ .+.++.++ +.+..+..|..++ +.++|+|+..-
T Consensus 16 ~mkilvlGaG--~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~--~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~ 85 (365)
T 3abi_A 16 HMKVLILGAG--NIGRAIAWDLKDEFDVYIGDVNNENLEKVK--EFATPLKVDASNFDKLVEVMKEFELVIGAL 85 (365)
T ss_dssp CCEEEEECCS--HHHHHHHHHHTTTSEEEEEESCHHHHHHHT--TTSEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred ccEEEEECCC--HHHHHHHHHHhcCCCeEEEEcCHHHHHHHh--ccCCcEEEecCCHHHHHHHHhCCCEEEEec
Confidence 4689999984 4444443332 2346778888 66666554 3556677787662 24589988753
No 469
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=37.14 E-value=15 Score=27.33 Aligned_cols=39 Identities=15% Similarity=0.191 Sum_probs=28.3
Q ss_pred eEEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC
Q 023384 121 SLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPE 159 (283)
Q Consensus 121 ~vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~ 159 (283)
..-=+.||||.=....+.++|+++...+--+.....+++
T Consensus 71 d~GIliCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~ 109 (155)
T 1o1x_A 71 DFGILLCGTGLGMSIAANRYRGIRAALCLFPDMARLARS 109 (155)
T ss_dssp SEEEEEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHH
T ss_pred ceEEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHH
Confidence 344467999998888999999999876655555544443
No 470
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=37.13 E-value=1.6e+02 Score=24.41 Aligned_cols=98 Identities=15% Similarity=0.105 Sum_probs=50.7
Q ss_pred CCeEEEEcCCccHHHHH--HHHHCCCCeEEEeec-hHHHhc-CC------C--CCCeEEEEcCCCCCCCCceEEEecccc
Q 023384 119 LGSLVDVGGGNGSLSRI--ISEAFPGIKCTVLDL-PHVVAN-LP------E--ADNLKYIAGDMFQFIPPADAFLFKLVF 186 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~--l~~~~p~~~~~~~D~-~~~~~~-a~------~--~~rv~~~~~d~~~~~p~~D~v~~~~vl 186 (283)
..+|.=||+|.-..+.+ ++......+++++|+ ++.++. +. . ..++++.. |-.+.+.++|+|++.--.
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~~~~a~~~aDvVvi~ag~ 84 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-GEYSDCHDADLVVICAGA 84 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-CCGGGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-CCHHHhCCCCEEEECCCC
Confidence 35899999865444433 333322247899998 432221 11 1 14555555 333356679999886533
Q ss_pred cCCCh-------hHHHHHHHHHHHhhccCCCCcEEEEE
Q 023384 187 HGLGD-------EDGLKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 187 h~~~d-------~~~~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
-.-+. .....+++.+.+.++...|++.++++
T Consensus 85 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~ 122 (317)
T 3d0o_A 85 AQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVA 122 (317)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 21111 22345555555544221125777774
No 471
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=37.11 E-value=18 Score=27.19 Aligned_cols=38 Identities=16% Similarity=0.167 Sum_probs=27.8
Q ss_pred EEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC
Q 023384 122 LVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPE 159 (283)
Q Consensus 122 vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~ 159 (283)
.-=+.||||.=....+.++|+++...+--+.....+++
T Consensus 81 ~GIliCGTGiG~sIaANKv~GIRAAlc~d~~sA~laR~ 118 (166)
T 3s5p_A 81 CCILVCGTGIGISIAANKMKGIRCALCSTEYDAEMARK 118 (166)
T ss_dssp EEEEEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHH
T ss_pred EEEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHH
Confidence 34467999998888999999999877655555544443
No 472
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=36.32 E-value=18 Score=26.72 Aligned_cols=37 Identities=24% Similarity=0.169 Sum_probs=27.4
Q ss_pred EEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC
Q 023384 123 VDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPE 159 (283)
Q Consensus 123 lDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~ 159 (283)
-=+.||||.=....+.++|+++...+--+.....+++
T Consensus 61 GIliCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~ 97 (149)
T 3he8_A 61 GIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSRE 97 (149)
T ss_dssp EEEEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHH
T ss_pred EEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHH
Confidence 3456999998888999999999877655555544443
No 473
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=36.08 E-value=1.1e+02 Score=25.45 Aligned_cols=98 Identities=15% Similarity=0.149 Sum_probs=49.4
Q ss_pred CCeEEEEcCCccHHHHHH--HHHCCCCeEEEeec-hHHHhc-CCC-------CCCeEEEEcCCCCCCCCceEEEeccccc
Q 023384 119 LGSLVDVGGGNGSLSRII--SEAFPGIKCTVLDL-PHVVAN-LPE-------ADNLKYIAGDMFQFIPPADAFLFKLVFH 187 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l--~~~~p~~~~~~~D~-~~~~~~-a~~-------~~rv~~~~~d~~~~~p~~D~v~~~~vlh 187 (283)
..+|.=||+|.=..+..+ +...-..+++++|+ ++.++. +.. ..++++..++ .+.+.++|+|++.--.-
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~-~~a~~~aDvVii~ag~~ 83 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGE-YSDCKDADLVVITAGAP 83 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECC-GGGGTTCSEEEECCCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECC-HHHhCCCCEEEECCCCC
Confidence 368899998643333332 22212236899998 443321 111 2455555533 33566799998865332
Q ss_pred CCCh-------hHHHHHHHHHHHhhccCCCCcEEEEE
Q 023384 188 GLGD-------EDGLKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 188 ~~~d-------~~~~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
.-+. .....+++.+.+.++...|.++++++
T Consensus 84 ~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~ 120 (318)
T 1ez4_A 84 QKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA 120 (318)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence 1110 12345566665554221125887775
No 474
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=35.65 E-value=1e+02 Score=25.36 Aligned_cols=67 Identities=15% Similarity=0.191 Sum_probs=42.0
Q ss_pred CCeEEEEcCCccHHHHHHHHHC--CCCeEEEeec-hH----HHhcCCCC------CCeEEEEcCCCCC------CCCceE
Q 023384 119 LGSLVDVGGGNGSLSRIISEAF--PGIKCTVLDL-PH----VVANLPEA------DNLKYIAGDMFQF------IPPADA 179 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~-~~----~~~~a~~~------~rv~~~~~d~~~~------~p~~D~ 179 (283)
..+||=.| |+|..+..+++.+ .+.++++++. +. .+...... .+++++.+|+.++ +.+.|+
T Consensus 25 ~~~vlVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 103 (351)
T 3ruf_A 25 PKTWLITG-VAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH 103 (351)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred CCeEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence 36788665 5777777766654 3568888886 21 11111111 6899999999873 235788
Q ss_pred EEecccc
Q 023384 180 FLFKLVF 186 (283)
Q Consensus 180 v~~~~vl 186 (283)
|+.....
T Consensus 104 Vih~A~~ 110 (351)
T 3ruf_A 104 VLHQAAL 110 (351)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 8766543
No 475
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=35.63 E-value=93 Score=25.89 Aligned_cols=94 Identities=11% Similarity=0.036 Sum_probs=51.2
Q ss_pred cCCCCeEEEEcCCc-cH-HHHHHHHHCCCCeEE-Eeec-hHHHhcCCCCCCeEEEEcCCCC--CCCCceEEEecccccCC
Q 023384 116 FEGLGSLVDVGGGN-GS-LSRIISEAFPGIKCT-VLDL-PHVVANLPEADNLKYIAGDMFQ--FIPPADAFLFKLVFHGL 189 (283)
Q Consensus 116 ~~~~~~vlDvGgG~-G~-~~~~l~~~~p~~~~~-~~D~-~~~~~~a~~~~rv~~~~~d~~~--~~p~~D~v~~~~vlh~~ 189 (283)
+....+|-=||||. |. .....++..|+.+++ ++|. ++..+...+.-.+...-.|+.+ .-++.|+|++...-+..
T Consensus 20 ~~~mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~~~H 99 (350)
T 4had_A 20 FQSMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTSQH 99 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCGGGH
T ss_pred ccCccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCCchh
Confidence 34445888899885 53 234566778999976 5687 5554443321112222234433 23467888875532110
Q ss_pred ChhHHHHHHHHHHHhhccCCCCcEEEEEeeec
Q 023384 190 GDEDGLKILKKRRAAIASNGERGKVIIIDIVI 221 (283)
Q Consensus 190 ~d~~~~~iL~~~~~~L~p~~~gg~lli~d~~~ 221 (283)
..-+.++|+- |+=+++|--+
T Consensus 100 --------~~~~~~al~a----GkhVl~EKPl 119 (350)
T 4had_A 100 --------IEWSIKAADA----GKHVVCEKPL 119 (350)
T ss_dssp --------HHHHHHHHHT----TCEEEECSCC
T ss_pred --------HHHHHHHHhc----CCEEEEeCCc
Confidence 2344556665 6777788433
No 476
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=34.94 E-value=55 Score=27.18 Aligned_cols=88 Identities=11% Similarity=-0.002 Sum_probs=43.2
Q ss_pred CeEEEEcCCc-cHHHHHHHHHCCCCeEE-Eeec-hHHHhcCCCCCCeEEEEcCCCC--CCCCceEEEecccccCCChhHH
Q 023384 120 GSLVDVGGGN-GSLSRIISEAFPGIKCT-VLDL-PHVVANLPEADNLKYIAGDMFQ--FIPPADAFLFKLVFHGLGDEDG 194 (283)
Q Consensus 120 ~~vlDvGgG~-G~~~~~l~~~~p~~~~~-~~D~-~~~~~~a~~~~rv~~~~~d~~~--~~p~~D~v~~~~vlh~~~d~~~ 194 (283)
.+|.=||||. |......+++.|+.+++ +.|. ++..+...+.-.+.....|+.+ .-+..|+|++...- ..-
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~-----~~h 80 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATIN-----QDH 80 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCG-----GGH
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCc-----HHH
Confidence 4788899984 33222333445777765 5576 4443333222222212234333 22458988875432 111
Q ss_pred HHHHHHHHHhhccCCCCcEEEEEee
Q 023384 195 LKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 195 ~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
..-+.++|+. |+-+++|-
T Consensus 81 ---~~~~~~al~a----Gk~Vl~EK 98 (329)
T 3evn_A 81 ---YKVAKAALLA----GKHVLVEK 98 (329)
T ss_dssp ---HHHHHHHHHT----TCEEEEES
T ss_pred ---HHHHHHHHHC----CCeEEEcc
Confidence 2334456775 66666663
No 477
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=34.90 E-value=1.4e+02 Score=24.65 Aligned_cols=98 Identities=15% Similarity=0.207 Sum_probs=51.4
Q ss_pred eEEEEcCCc-cHHHHHHHHHCCC-CeEEEeechH-HHh-cCC------C--CCCeEEEEcCCCCCCCCceEEEecccccC
Q 023384 121 SLVDVGGGN-GSLSRIISEAFPG-IKCTVLDLPH-VVA-NLP------E--ADNLKYIAGDMFQFIPPADAFLFKLVFHG 188 (283)
Q Consensus 121 ~vlDvGgG~-G~~~~~l~~~~p~-~~~~~~D~~~-~~~-~a~------~--~~rv~~~~~d~~~~~p~~D~v~~~~vlh~ 188 (283)
+|-=||+|. |.....++...+- -+.+++|+.+ ..+ .+. . .........+-.+...+.|+|++..-.-.
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitAG~pr 81 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLAR 81 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECCCCCC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEecCCCC
Confidence 455677542 4433333333344 3689999843 221 111 0 22344443332334557899988665433
Q ss_pred CC---hh----HHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 189 LG---DE----DGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 189 ~~---d~----~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
-+ +. ...+|++.+.+.++...|.+.++++.
T Consensus 82 kpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs 118 (294)
T 2x0j_A 82 KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (294)
T ss_dssp CSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence 22 22 25677777777775433357777654
No 478
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=34.90 E-value=1.7e+02 Score=23.32 Aligned_cols=77 Identities=13% Similarity=0.252 Sum_probs=44.4
Q ss_pred CeEEEEcCCccHHHHHHHHHC--CCCeEEEeec-hHHHhcCCC-----CCCeEEEEcCCCCCCCCceEEEecccccCCCh
Q 023384 120 GSLVDVGGGNGSLSRIISEAF--PGIKCTVLDL-PHVVANLPE-----ADNLKYIAGDMFQFIPPADAFLFKLVFHGLGD 191 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~-----~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~d 191 (283)
+.+|=-|++.| ...++++++ -+.++++.|+ ++.++...+ ..++.++..|.. +.
T Consensus 8 KvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt------------------~~ 68 (254)
T 4fn4_A 8 KVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVS------------------KK 68 (254)
T ss_dssp CEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT------------------SH
T ss_pred CEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCC------------------CH
Confidence 55555565544 555555544 4778999998 544433321 455666666654 33
Q ss_pred hHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 192 EDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 192 ~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
+++.++++++.+...+ =-++|...
T Consensus 69 ~~v~~~~~~~~~~~G~----iDiLVNNA 92 (254)
T 4fn4_A 69 KDVEEFVRRTFETYSR----IDVLCNNA 92 (254)
T ss_dssp HHHHHHHHHHHHHHSC----CCEEEECC
T ss_pred HHHHHHHHHHHHHcCC----CCEEEECC
Confidence 5566777777777654 33455543
No 479
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=34.85 E-value=69 Score=26.75 Aligned_cols=88 Identities=14% Similarity=0.049 Sum_probs=45.2
Q ss_pred CeEEEEcCCc-cHHHHHHHHHCCCCeEE-Eeec-hHHHhcCCCCCCeEEEEcCCCC--CCCCceEEEecccccCCChhHH
Q 023384 120 GSLVDVGGGN-GSLSRIISEAFPGIKCT-VLDL-PHVVANLPEADNLKYIAGDMFQ--FIPPADAFLFKLVFHGLGDEDG 194 (283)
Q Consensus 120 ~~vlDvGgG~-G~~~~~l~~~~p~~~~~-~~D~-~~~~~~a~~~~rv~~~~~d~~~--~~p~~D~v~~~~vlh~~~d~~~ 194 (283)
.+|.=||||. |......+.+.|+.+++ +.|. ++..+...+.-.+.....|+.+ .-+..|+|++...- ..-
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~-----~~h 77 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSST-----NTH 77 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCG-----GGH
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCC-----cch
Confidence 3677889874 33333333446888876 5687 5554443221112222234333 22468998886532 221
Q ss_pred HHHHHHHHHhhccCCCCcEEEEEee
Q 023384 195 LKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 195 ~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
..-+.++|+. |+-+++|-
T Consensus 78 ---~~~~~~al~~----gk~v~~EK 95 (344)
T 3ezy_A 78 ---SELVIACAKA----KKHVFCEK 95 (344)
T ss_dssp ---HHHHHHHHHT----TCEEEEES
T ss_pred ---HHHHHHHHhc----CCeEEEEC
Confidence 2333456775 55566663
No 480
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=34.79 E-value=1.8e+02 Score=23.51 Aligned_cols=68 Identities=13% Similarity=0.097 Sum_probs=38.9
Q ss_pred CeEEEEcCCccHHHHHHHHHC--CCCeEEEeec-hHHHhcCCC--CCCeEEEEcCCCCCCCCceEEEecccccCCChhHH
Q 023384 120 GSLVDVGGGNGSLSRIISEAF--PGIKCTVLDL-PHVVANLPE--ADNLKYIAGDMFQFIPPADAFLFKLVFHGLGDEDG 194 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~--~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~~ 194 (283)
+.+|=-|++ +....++++++ .+.++++.|+ .+.++.+.+ ..++.++..|.. +.+++
T Consensus 30 KvalVTGas-~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~------------------~~~~v 90 (273)
T 4fgs_A 30 KIAVITGAT-SGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSA------------------NLAEL 90 (273)
T ss_dssp CEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTT------------------CHHHH
T ss_pred CEEEEeCcC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCC------------------CHHHH
Confidence 455555554 44555555554 4678999998 555544322 344555555533 23456
Q ss_pred HHHHHHHHHhhc
Q 023384 195 LKILKKRRAAIA 206 (283)
Q Consensus 195 ~~iL~~~~~~L~ 206 (283)
.++++++.+...
T Consensus 91 ~~~~~~~~~~~G 102 (273)
T 4fgs_A 91 DRLYEKVKAEAG 102 (273)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHcC
Confidence 667777766654
No 481
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=34.72 E-value=1.4e+02 Score=25.03 Aligned_cols=87 Identities=14% Similarity=-0.033 Sum_probs=48.0
Q ss_pred CeEEEEcCCc-cH-HHHHHHHHCCCCeEE-Eeec-hHHHhcCCCCCCeEEEEcCCCC--CCCCceEEEecccccCCChhH
Q 023384 120 GSLVDVGGGN-GS-LSRIISEAFPGIKCT-VLDL-PHVVANLPEADNLKYIAGDMFQ--FIPPADAFLFKLVFHGLGDED 193 (283)
Q Consensus 120 ~~vlDvGgG~-G~-~~~~l~~~~p~~~~~-~~D~-~~~~~~a~~~~rv~~~~~d~~~--~~p~~D~v~~~~vlh~~~d~~ 193 (283)
.+|.=||||. |. .....+.+.|+.+++ +.|. ++..+...+.-.+... .|+.+ .-++.|+|++... +..
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~-~~~~~ll~~~~~D~V~i~tp-----~~~ 101 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPV-EGYPALLERDDVDAVYVPLP-----AVL 101 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEE-ESHHHHHTCTTCSEEEECCC-----GGG
T ss_pred eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCc-CCHHHHhcCCCCCEEEECCC-----cHH
Confidence 5799999974 43 233445567888876 6687 5544433221123333 44444 2346899887542 221
Q ss_pred HHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 194 GLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 194 ~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
- ..-+.++|+. |+-+++|-
T Consensus 102 h---~~~~~~al~a----Gk~Vl~EK 120 (350)
T 3rc1_A 102 H---AEWIDRALRA----GKHVLAEK 120 (350)
T ss_dssp H---HHHHHHHHHT----TCEEEEES
T ss_pred H---HHHHHHHHHC----CCcEEEeC
Confidence 1 2334466775 66677773
No 482
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=34.69 E-value=95 Score=27.64 Aligned_cols=87 Identities=9% Similarity=0.197 Sum_probs=51.8
Q ss_pred CeEEEEcCCc--cHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----------C------------CCeEEEEcCCCCC
Q 023384 120 GSLVDVGGGN--GSLSRIISEAFPGIKCTVLDL-PHVVANLPE-----------A------------DNLKYIAGDMFQF 173 (283)
Q Consensus 120 ~~vlDvGgG~--G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------~------------~rv~~~~~d~~~~ 173 (283)
.+|.=||+|. +..+..++++ +.++++.|. ++.++.+.+ . .++++. .|. +.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~-~~ 81 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH--GHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV-TDI-HA 81 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE-CCG-GG
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe-CCH-HH
Confidence 5677788875 2233344443 678999998 666554321 1 244432 233 23
Q ss_pred CCCceEEEecccccCCChh-HHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 174 IPPADAFLFKLVFHGLGDE-DGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 174 ~p~~D~v~~~~vlh~~~d~-~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
+.+.|+|+..-. .+. -...+++++.+.++| +.+++.+
T Consensus 82 ~~~aDlVIeAVp----e~~~vk~~v~~~l~~~~~~----~~Ilasn 119 (483)
T 3mog_A 82 LAAADLVIEAAS----ERLEVKKALFAQLAEVCPP----QTLLTTN 119 (483)
T ss_dssp GGGCSEEEECCC----CCHHHHHHHHHHHHHHSCT----TCEEEEC
T ss_pred hcCCCEEEEcCC----CcHHHHHHHHHHHHHhhcc----CcEEEec
Confidence 446899988542 232 235789999999998 5566543
No 483
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=34.49 E-value=49 Score=27.38 Aligned_cols=85 Identities=14% Similarity=0.171 Sum_probs=43.3
Q ss_pred eEEEEcCCc-cHHHHHHHHHCCCCeEE-Eeec-hHHHhcCCC-CCCeEEEEcCCCCCC-CCceEEEecccccCCChhHHH
Q 023384 121 SLVDVGGGN-GSLSRIISEAFPGIKCT-VLDL-PHVVANLPE-ADNLKYIAGDMFQFI-PPADAFLFKLVFHGLGDEDGL 195 (283)
Q Consensus 121 ~vlDvGgG~-G~~~~~l~~~~p~~~~~-~~D~-~~~~~~a~~-~~rv~~~~~d~~~~~-p~~D~v~~~~vlh~~~d~~~~ 195 (283)
+|.=||||. |......+.+.|+.+.+ +.|. ++..+...+ ..... ...|+.+-+ ++.|+|+..-.- ..-
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~D~V~i~tp~-----~~h- 75 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQ-LFDQLEVFFKSSFDLVYIASPN-----SLH- 75 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCE-EESCHHHHHTSSCSEEEECSCG-----GGH-
T ss_pred EEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCe-EeCCHHHHhCCCCCEEEEeCCh-----HHH-
Confidence 577788874 33333334456777765 6777 554443222 12112 223333222 458988886532 211
Q ss_pred HHHHHHHHhhccCCCCcEEEEEe
Q 023384 196 KILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 196 ~iL~~~~~~L~p~~~gg~lli~d 218 (283)
..-+.++|+. |+-+++|
T Consensus 76 --~~~~~~al~~----gk~V~~E 92 (325)
T 2ho3_A 76 --FAQAKAALSA----GKHVILE 92 (325)
T ss_dssp --HHHHHHHHHT----TCEEEEE
T ss_pred --HHHHHHHHHc----CCcEEEe
Confidence 2233456775 6656666
No 484
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=34.36 E-value=81 Score=27.85 Aligned_cols=62 Identities=16% Similarity=0.260 Sum_probs=44.1
Q ss_pred CCeEEEEcCCccHHHHHHHHHCC--CCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCC-------CCCceEEEe
Q 023384 119 LGSLVDVGGGNGSLSRIISEAFP--GIKCTVLDL-PHVVANLPEADNLKYIAGDMFQF-------IPPADAFLF 182 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~~~l~~~~p--~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~-------~p~~D~v~~ 182 (283)
..+|+=+|| |..+..+++..- +..++++|. ++.++.+.+.-.+..+.||..++ ...+|+++.
T Consensus 3 ~M~iiI~G~--G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 3 AMKIIILGA--GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp CEEEEEECC--SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred cCEEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence 356776666 567777777763 457999999 77777665433578899999884 235898876
No 485
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=34.33 E-value=77 Score=26.09 Aligned_cols=82 Identities=15% Similarity=0.133 Sum_probs=41.9
Q ss_pred CeEEEEcCCc-cHHHHHHHHHCCCCeEE-Eeec-hHHHhcCCCCCCeEEE-EcCCCCCCCCceEEEecccccCCChhHHH
Q 023384 120 GSLVDVGGGN-GSLSRIISEAFPGIKCT-VLDL-PHVVANLPEADNLKYI-AGDMFQFIPPADAFLFKLVFHGLGDEDGL 195 (283)
Q Consensus 120 ~~vlDvGgG~-G~~~~~l~~~~p~~~~~-~~D~-~~~~~~a~~~~rv~~~-~~d~~~~~p~~D~v~~~~vlh~~~d~~~~ 195 (283)
.+|.=||+|. |......+++.|+.+++ ++|. ++..+. ..+.+. .-|+. ..++.|+|+.+-. ...
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~----~g~~~~~~~~l~-~~~~~DvViiatp-----~~~-- 77 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF----ELQPFRVVSDIE-QLESVDVALVCSP-----SRE-- 77 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC-----------CCTTSCEESSGG-GSSSCCEEEECSC-----HHH--
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH----cCCCcCCHHHHH-hCCCCCEEEECCC-----chh--
Confidence 5788899873 44444445567898887 5787 443332 111111 11222 2246898887542 221
Q ss_pred HHHHHHHHhhccCCCCcEEEEEe
Q 023384 196 KILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 196 ~iL~~~~~~L~p~~~gg~lli~d 218 (283)
-.+.+.++++. |+-++.+
T Consensus 78 -h~~~~~~al~a----G~~Vi~e 95 (304)
T 3bio_A 78 -VERTALEILKK----GICTADS 95 (304)
T ss_dssp -HHHHHHHHHTT----TCEEEEC
T ss_pred -hHHHHHHHHHc----CCeEEEC
Confidence 13445567775 5655655
No 486
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=34.29 E-value=44 Score=28.90 Aligned_cols=92 Identities=15% Similarity=0.178 Sum_probs=47.8
Q ss_pred eEEEEcCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-CC----------------CeEEEEcCCCCCCCCceEEE
Q 023384 121 SLVDVGGGNGSLSRIISEAFP-GIKCTVLDL-PHVVANLPE-AD----------------NLKYIAGDMFQFIPPADAFL 181 (283)
Q Consensus 121 ~vlDvGgG~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-~~----------------rv~~~~~d~~~~~p~~D~v~ 181 (283)
+|.=||+|. .+..++..+- +.+++++|. ++.++..++ .. ++.+ ..|..+....+|+|+
T Consensus 2 kI~VIG~G~--vG~~~A~~La~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~-t~~~~~~~~~aDvvi 78 (402)
T 1dlj_A 2 KIAVAGSGY--VGLSLGVLLSLQNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKA-TLDSKAAYKEAELVI 78 (402)
T ss_dssp EEEEECCSH--HHHHHHHHHTTTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE-ESCHHHHHHHCSEEE
T ss_pred EEEEECCCH--HHHHHHHHHhCCCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEE-eCCHHHHhcCCCEEE
Confidence 466777753 3333222211 568999998 666554432 11 2222 112111122479888
Q ss_pred ecccccC-----CCh-hHHHHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 182 FKLVFHG-----LGD-EDGLKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 182 ~~~vlh~-----~~d-~~~~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
++---.. -+| ....++++.+.+ +++ |.++|....
T Consensus 79 iavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~----~~iVV~~ST 118 (402)
T 1dlj_A 79 IATPTNYNSRINYFDTQHVETVIKEVLS-VNS----HATLIIKST 118 (402)
T ss_dssp ECCCCCEETTTTEECCHHHHHHHHHHHH-HCS----SCEEEECSC
T ss_pred EecCCCcccCCCCccHHHHHHHHHHHHh-hCC----CCEEEEeCC
Confidence 8642210 000 146778888888 888 666665433
No 487
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=34.27 E-value=60 Score=28.28 Aligned_cols=91 Identities=11% Similarity=-0.010 Sum_probs=55.3
Q ss_pred cCCCCeEEEEcC--CccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--CCCe-EEEEcCCCC-----------------
Q 023384 116 FEGLGSLVDVGG--GNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE--ADNL-KYIAGDMFQ----------------- 172 (283)
Q Consensus 116 ~~~~~~vlDvGg--G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~~rv-~~~~~d~~~----------------- 172 (283)
+....+||-.|+ |.|..+..+++.. +.++++.+. ++..+.+++ .+.+ .....|+.+
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLA 296 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHH
Confidence 556789999984 6788888888875 568777776 555555443 1211 111112210
Q ss_pred -C----CC-CceEEEecccccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 173 -F----IP-PADAFLFKLVFHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 173 -~----~p-~~D~v~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
. .+ .+|+++-..- . ..++...+.|++ ||+++++-.
T Consensus 297 ~~v~~~~g~g~Dvvid~~G-----~----~~~~~~~~~l~~---~G~iv~~G~ 337 (447)
T 4a0s_A 297 KLVVEKAGREPDIVFEHTG-----R----VTFGLSVIVARR---GGTVVTCGS 337 (447)
T ss_dssp HHHHHHHSSCCSEEEECSC-----H----HHHHHHHHHSCT---TCEEEESCC
T ss_pred HHHHHHhCCCceEEEECCC-----c----hHHHHHHHHHhc---CCEEEEEec
Confidence 0 02 4788876432 2 246778889998 799888754
No 488
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=34.18 E-value=15 Score=30.94 Aligned_cols=88 Identities=15% Similarity=0.215 Sum_probs=53.7
Q ss_pred CCCeEEEEc--CCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEc--CCCCC-----CCCceEEEeccccc
Q 023384 118 GLGSLVDVG--GGNGSLSRIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAG--DMFQF-----IPPADAFLFKLVFH 187 (283)
Q Consensus 118 ~~~~vlDvG--gG~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~--d~~~~-----~p~~D~v~~~~vlh 187 (283)
...+||-+| ||.|..+..+++.. +.++++.|. ++..+.+++..--.++.. |+.+. ...+|+++-+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~--- 225 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTF--- 225 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESS---
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECC---
Confidence 567899885 45688888888875 569999998 666655544111111111 11110 12488877632
Q ss_pred CCChhHHHHHHHHHHHhhccCCCCcEEEEE
Q 023384 188 GLGDEDGLKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 188 ~~~d~~~~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
.. ...++.+.++|++ +|+++.+
T Consensus 226 --g~---~~~~~~~~~~l~~---~G~iv~~ 247 (346)
T 3fbg_A 226 --NT---DMYYDDMIQLVKP---RGHIATI 247 (346)
T ss_dssp --CH---HHHHHHHHHHEEE---EEEEEES
T ss_pred --Cc---hHHHHHHHHHhcc---CCEEEEE
Confidence 22 2456788899999 7888654
No 489
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=34.15 E-value=18 Score=27.34 Aligned_cols=38 Identities=24% Similarity=0.145 Sum_probs=27.9
Q ss_pred EEEEcCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC
Q 023384 122 LVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVANLPE 159 (283)
Q Consensus 122 vlDvGgG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~ 159 (283)
.-=+.||||.=....+.++|+++...+--+.....+++
T Consensus 80 ~GIliCGTGiG~sIaANKv~GIRAAlc~d~~sA~~aR~ 117 (169)
T 3ph3_A 80 RGIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSRE 117 (169)
T ss_dssp EEEEEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHH
T ss_pred EEEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHH
Confidence 34467999998888999999999877655555554443
No 490
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=33.94 E-value=39 Score=28.02 Aligned_cols=85 Identities=15% Similarity=0.119 Sum_probs=50.3
Q ss_pred eEEEEcC--CccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--CCCeEEEEcCC----CCCC--CCceEEEecccccCC
Q 023384 121 SLVDVGG--GNGSLSRIISEAFPGIKCTVLDL-PHVVANLPE--ADNLKYIAGDM----FQFI--PPADAFLFKLVFHGL 189 (283)
Q Consensus 121 ~vlDvGg--G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~~rv~~~~~d~----~~~~--p~~D~v~~~~vlh~~ 189 (283)
+||-+|+ |.|..+..+++.. +.++++.+. ++..+.+++ .+.+ +-..+. .... ..+|+++-.--
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~~~~~~~d~vid~~g---- 225 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRVLGAKEV-LAREDVMAERIRPLDKQRWAAAVDPVG---- 225 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHHTTCSEE-EECC---------CCSCCEEEEEECST----
T ss_pred eEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCCcEE-EecCCcHHHHHHHhcCCcccEEEECCc----
Confidence 7999985 7788888888876 468888886 444443332 1111 111111 1111 24888775432
Q ss_pred ChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 190 GDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 190 ~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
. ..+....+.|++ +|+++++-.
T Consensus 226 -~----~~~~~~~~~l~~---~G~~v~~G~ 247 (328)
T 1xa0_A 226 -G----RTLATVLSRMRY---GGAVAVSGL 247 (328)
T ss_dssp -T----TTHHHHHHTEEE---EEEEEECSC
T ss_pred -H----HHHHHHHHhhcc---CCEEEEEee
Confidence 1 136677889999 799887654
No 491
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=33.45 E-value=19 Score=30.25 Aligned_cols=90 Identities=17% Similarity=0.139 Sum_probs=55.5
Q ss_pred cCCCCeEEEEc--CCccHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEEEc--CCCCCC------CCceEEEeccc
Q 023384 116 FEGLGSLVDVG--GGNGSLSRIISEAFPGIKCTVLDLPHVVANLPEADNLKYIAG--DMFQFI------PPADAFLFKLV 185 (283)
Q Consensus 116 ~~~~~~vlDvG--gG~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~rv~~~~~--d~~~~~------p~~D~v~~~~v 185 (283)
.....+||-+| ||.|..+..+++.. +.++++...++..+.+++.. ...+.. |+.+.+ ..+|+++-+-
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~lG-a~~i~~~~~~~~~~~~~~~~~g~D~vid~~- 224 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALAR-GARVFATARGSDLEYVRDLG-ATPIDASREPEDYAAEHTAGQGFDLVYDTL- 224 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECHHHHHHHHHHT-SEEEETTSCHHHHHHHHHTTSCEEEEEESS-
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCHHHHHHHHHcC-CCEeccCCCHHHHHHHHhcCCCceEEEECC-
Confidence 55678999999 46788888888875 55887774466665554411 111221 111100 1488877643
Q ss_pred ccCCChhHHHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 186 FHGLGDEDGLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 186 lh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
.. ..+....+.|++ +|+++++-.
T Consensus 225 ----g~----~~~~~~~~~l~~---~G~iv~~g~ 247 (343)
T 3gaz_A 225 ----GG----PVLDASFSAVKR---FGHVVSCLG 247 (343)
T ss_dssp ----CT----HHHHHHHHHEEE---EEEEEESCC
T ss_pred ----Cc----HHHHHHHHHHhc---CCeEEEEcc
Confidence 22 357788889999 798887654
No 492
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=33.42 E-value=60 Score=26.86 Aligned_cols=89 Identities=17% Similarity=0.232 Sum_probs=47.3
Q ss_pred CCeEEEEcCCccH--HHHHHHHHCCCCeEEEeechHHHhcCCC-C-----CCeEEE-----EcCCCCCCCCceEEEeccc
Q 023384 119 LGSLVDVGGGNGS--LSRIISEAFPGIKCTVLDLPHVVANLPE-A-----DNLKYI-----AGDMFQFIPPADAFLFKLV 185 (283)
Q Consensus 119 ~~~vlDvGgG~G~--~~~~l~~~~p~~~~~~~D~~~~~~~a~~-~-----~rv~~~-----~~d~~~~~p~~D~v~~~~v 185 (283)
..+|.=||+|.=. ++..|++. +.+++++-.++.++..++ . ....+. ..|. +....+|+|++.-
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~--G~~V~l~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~D~vilav- 94 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARA--GHEVILIARPQHVQAIEATGLRLETQSFDEQVKVSASSDP-SAVQGADLVLFCV- 94 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHT--TCEEEEECCHHHHHHHHHHCEEEECSSCEEEECCEEESCG-GGGTTCSEEEECC-
T ss_pred CCcEEEECcCHHHHHHHHHHHHC--CCeEEEEEcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCH-HHcCCCCEEEEEc-
Confidence 3789999887422 33334443 446776622555544332 1 111110 1111 1233589998854
Q ss_pred ccCCChhHHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 186 FHGLGDEDGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 186 lh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
+..+...+++.+...++| +..++.+-
T Consensus 95 ----k~~~~~~~l~~l~~~l~~---~~~iv~~~ 120 (318)
T 3hwr_A 95 ----KSTDTQSAALAMKPALAK---SALVLSLQ 120 (318)
T ss_dssp ----CGGGHHHHHHHHTTTSCT---TCEEEEEC
T ss_pred ----ccccHHHHHHHHHHhcCC---CCEEEEeC
Confidence 334566888888888988 45444443
No 493
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=33.28 E-value=1.7e+02 Score=23.94 Aligned_cols=98 Identities=17% Similarity=0.141 Sum_probs=53.5
Q ss_pred CeEEEEcCCccHHHHHHHHHC--CCCeEEEeech-H-HHhcCCCCCCeEEEEcCCCCC--C----CC--ceEEEeccccc
Q 023384 120 GSLVDVGGGNGSLSRIISEAF--PGIKCTVLDLP-H-VVANLPEADNLKYIAGDMFQF--I----PP--ADAFLFKLVFH 187 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~~-~-~~~~a~~~~rv~~~~~d~~~~--~----p~--~D~v~~~~vlh 187 (283)
.+||=.| |+|..+..+++.+ .+.++++++.. . ..+......++.++.+|+.++ + .. .|+|+......
T Consensus 22 ~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~ 100 (333)
T 2q1w_A 22 KKVFITG-ICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAASY 100 (333)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred CEEEEeC-CccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECceec
Confidence 5677665 5677777766554 24688888873 2 112222125789999999873 2 23 78887755443
Q ss_pred CC-ChhH-----HHHHHHHHHHhhccCCCCcEEEEEee
Q 023384 188 GL-GDED-----GLKILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 188 ~~-~d~~-----~~~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
.. +.++ ...-..++.+++++.+ .++++.+..
T Consensus 101 ~~~~~~~~~~~~N~~~~~~l~~a~~~~~-~~~iV~~SS 137 (333)
T 2q1w_A 101 KDPDDWYNDTLTNCVGGSNVVQAAKKNN-VGRFVYFQT 137 (333)
T ss_dssp SCTTCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEE
T ss_pred CCCccCChHHHHHHHHHHHHHHHHHHhC-CCEEEEECc
Confidence 32 1111 1222334444444411 257776654
No 494
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=33.05 E-value=80 Score=26.12 Aligned_cols=88 Identities=20% Similarity=0.164 Sum_probs=49.2
Q ss_pred CCeEEEEcCCccHHH--HHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEEcCCCCCCCCceEEEecccccCCChhHHH
Q 023384 119 LGSLVDVGGGNGSLS--RIISEAFPGIKCTVLDL-PHVVANLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLGDEDGL 195 (283)
Q Consensus 119 ~~~vlDvGgG~G~~~--~~l~~~~p~~~~~~~D~-~~~~~~a~~~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~~~ 195 (283)
..+|.=||+|.=... ..+++. +.++++.|. ++.++...+. .+.+ ..|..+-....|+|++.-. ++....
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~l~~~-g~~~-~~~~~e~~~~aDvVi~~vp----~~~~~~ 102 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEA--GYALQVWNRTPARAASLAAL-GATI-HEQARAAARDADIVVSMLE----NGAVVQ 102 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTT-TCEE-ESSHHHHHTTCSEEEECCS----SHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHC-CCEe-eCCHHHHHhcCCEEEEECC----CHHHHH
Confidence 358999988743322 223333 568999998 6666554332 2322 1222222335899887442 234555
Q ss_pred HHHH--HHHHhhccCCCCcEEEEEe
Q 023384 196 KILK--KRRAAIASNGERGKVIIID 218 (283)
Q Consensus 196 ~iL~--~~~~~L~p~~~gg~lli~d 218 (283)
.++. .+.+.+++ |.++|..
T Consensus 103 ~v~~~~~~~~~l~~----~~~vi~~ 123 (320)
T 4dll_A 103 DVLFAQGVAAAMKP----GSLFLDM 123 (320)
T ss_dssp HHHTTTCHHHHCCT----TCEEEEC
T ss_pred HHHcchhHHhhCCC----CCEEEec
Confidence 6666 67778887 5555433
No 495
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=32.80 E-value=46 Score=27.82 Aligned_cols=88 Identities=14% Similarity=0.199 Sum_probs=51.4
Q ss_pred CCeEEEEcCCc--cHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---------------C---------CCeEEEEcCCC
Q 023384 119 LGSLVDVGGGN--GSLSRIISEAFPGIKCTVLDL-PHVVANLPE---------------A---------DNLKYIAGDMF 171 (283)
Q Consensus 119 ~~~vlDvGgG~--G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------------~---------~rv~~~~~d~~ 171 (283)
..+|.=||+|. +.++..++++ +.+++++|. ++.++.+.+ . .++++. .|..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~ 82 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLA 82 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHH
Confidence 36788898875 2233344443 678999998 666554321 0 134432 2332
Q ss_pred CCCCCceEEEecccccCCCh-hHHHHHHHHHHHhhccCCCCcEEEEE
Q 023384 172 QFIPPADAFLFKLVFHGLGD-EDGLKILKKRRAAIASNGERGKVIII 217 (283)
Q Consensus 172 ~~~p~~D~v~~~~vlh~~~d-~~~~~iL~~~~~~L~p~~~gg~lli~ 217 (283)
+...++|+|+.+-. .+ +-...+++++.+.++| +.+++.
T Consensus 83 eav~~aDlVieavp----e~~~~k~~v~~~l~~~~~~----~~Ii~s 121 (319)
T 2dpo_A 83 EAVEGVVHIQECVP----ENLDLKRKIFAQLDSIVDD----RVVLSS 121 (319)
T ss_dssp HHTTTEEEEEECCC----SCHHHHHHHHHHHHTTCCS----SSEEEE
T ss_pred HHHhcCCEEEEecc----CCHHHHHHHHHHHHhhCCC----CeEEEE
Confidence 23456899988542 22 2345778999999998 555543
No 496
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=32.79 E-value=1.8e+02 Score=22.86 Aligned_cols=98 Identities=15% Similarity=0.181 Sum_probs=53.8
Q ss_pred CeEEEEcCCc-cHHHHHHHHHC--CCCeEEEeec-h---HHHhcCCC-CCCeEEEEcCCCCC--C-----------CCce
Q 023384 120 GSLVDVGGGN-GSLSRIISEAF--PGIKCTVLDL-P---HVVANLPE-ADNLKYIAGDMFQF--I-----------PPAD 178 (283)
Q Consensus 120 ~~vlDvGgG~-G~~~~~l~~~~--p~~~~~~~D~-~---~~~~~a~~-~~rv~~~~~d~~~~--~-----------p~~D 178 (283)
+++|=.|+++ |....++++++ .+.++++.|. + +.++...+ ..+..++..|+.++ + +..|
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 89 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFD 89 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEE
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 5677777642 55555555443 3578888887 3 22222111 23346788898872 1 1358
Q ss_pred EEEecccccC-----------CChhHH-----------HHHHHHHHHhhccCCCCcEEEEEeee
Q 023384 179 AFLFKLVFHG-----------LGDEDG-----------LKILKKRRAAIASNGERGKVIIIDIV 220 (283)
Q Consensus 179 ~v~~~~vlh~-----------~~d~~~-----------~~iL~~~~~~L~p~~~gg~lli~d~~ 220 (283)
+++.+.-... .+.++. ..+++.+.+.|++ +|+++.+...
T Consensus 90 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~ 150 (265)
T 1qsg_A 90 GFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYL 150 (265)
T ss_dssp EEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECG
T ss_pred EEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEcch
Confidence 8777654322 333322 2344555666665 5788777654
No 497
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=32.73 E-value=1.3e+02 Score=24.95 Aligned_cols=98 Identities=7% Similarity=0.110 Sum_probs=48.1
Q ss_pred eEEEEcCCccHHHH--HHHHHCCCCeEEEeec-hHHHhc-CCC--------CCCeEEEEcCCCCCCCCceEEEecccccC
Q 023384 121 SLVDVGGGNGSLSR--IISEAFPGIKCTVLDL-PHVVAN-LPE--------ADNLKYIAGDMFQFIPPADAFLFKLVFHG 188 (283)
Q Consensus 121 ~vlDvGgG~G~~~~--~l~~~~p~~~~~~~D~-~~~~~~-a~~--------~~rv~~~~~d~~~~~p~~D~v~~~~vlh~ 188 (283)
+|.=||+|.=..+. .++...-.-+++++|+ ++.++. +.+ ..++++...+-.+.+.++|++++..-.-.
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~~ 81 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLPR 81 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC--
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCCC
Confidence 46667764322222 2333311127899998 433221 000 23445543344445667999988654321
Q ss_pred CC---h----hHHHHHHHHHHHhhccCCCCcEEEEEe
Q 023384 189 LG---D----EDGLKILKKRRAAIASNGERGKVIIID 218 (283)
Q Consensus 189 ~~---d----~~~~~iL~~~~~~L~p~~~gg~lli~d 218 (283)
-+ . .....+++.+.+.++...|.+.++++.
T Consensus 82 kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt 118 (314)
T 3nep_X 82 SPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA 118 (314)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred CCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence 11 1 224567777777665322357776655
No 498
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=32.64 E-value=1.8e+02 Score=25.52 Aligned_cols=66 Identities=21% Similarity=0.272 Sum_probs=42.3
Q ss_pred CCCCeEEEEcCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCC-CCCCeEEEEcCCCC-CC------CCceEEEecc
Q 023384 117 EGLGSLVDVGGGN-GSLSRIISEAFPGIKCTVLDL-PHVVANLP-EADNLKYIAGDMFQ-FI------PPADAFLFKL 184 (283)
Q Consensus 117 ~~~~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-~~~rv~~~~~d~~~-~~------p~~D~v~~~~ 184 (283)
...++|+=+|||. |..+...++. ..++.+++. ++..+... +-+++.++.||..+ .+ ..+|+++...
T Consensus 233 ~~~~~v~I~GgG~ig~~lA~~L~~--~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T 308 (461)
T 4g65_A 233 KPYRRIMIVGGGNIGASLAKRLEQ--TYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIALT 308 (461)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHTT--TSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEECC
T ss_pred ccccEEEEEcchHHHHHHHHHhhh--cCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcEEEEcc
Confidence 4567899998875 3333333333 456777776 55544433 35678899999998 31 2489988843
No 499
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=32.52 E-value=1.8e+02 Score=23.64 Aligned_cols=101 Identities=14% Similarity=0.134 Sum_probs=53.8
Q ss_pred CCCeEEEEcCCccHHHHHHHHHC--CCCeEEEeec-hHHHhcCCC------CCCeEEE-EcCCCCC--CC----CceEEE
Q 023384 118 GLGSLVDVGGGNGSLSRIISEAF--PGIKCTVLDL-PHVVANLPE------ADNLKYI-AGDMFQF--IP----PADAFL 181 (283)
Q Consensus 118 ~~~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~------~~rv~~~-~~d~~~~--~p----~~D~v~ 181 (283)
...+||=.| |+|..+..+++.+ .+.++++++. +.......+ ..++.++ .+|+.++ +. ..|+|+
T Consensus 10 ~~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 88 (342)
T 1y1p_A 10 EGSLVLVTG-ANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence 346777665 5677776665543 3567888887 333221110 2578888 7998872 22 468887
Q ss_pred ecccccCCC-h-hH----HHHHHHHHHHhhcc-CCCCcEEEEEeee
Q 023384 182 FKLVFHGLG-D-ED----GLKILKKRRAAIAS-NGERGKVIIIDIV 220 (283)
Q Consensus 182 ~~~vlh~~~-d-~~----~~~iL~~~~~~L~p-~~~gg~lli~d~~ 220 (283)
......... + ++ ...-..++.+++++ .+ .++++.+...
T Consensus 89 h~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~-~~~iv~~SS~ 133 (342)
T 1y1p_A 89 HIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPS-VKRFVLTSST 133 (342)
T ss_dssp ECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTT-CCEEEEECCG
T ss_pred EeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCC-CcEEEEeccH
Confidence 655433221 1 11 12223445555432 11 3677776643
No 500
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=32.46 E-value=1.9e+02 Score=22.99 Aligned_cols=77 Identities=23% Similarity=0.353 Sum_probs=44.3
Q ss_pred CeEEEEcCCccHHHHHHHHHC--CCCeEEEeec-hHHHhc-CCCCCCeEEEEcCCCCCCCCceEEEecccccCCChhHHH
Q 023384 120 GSLVDVGGGNGSLSRIISEAF--PGIKCTVLDL-PHVVAN-LPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLGDEDGL 195 (283)
Q Consensus 120 ~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~-a~~~~rv~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~~~ 195 (283)
++||=-|++.| ...++++++ -+.++++.|+ ++..+. +++..++.++..|.. +.+++.
T Consensus 3 K~vlVTGas~G-IG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~------------------~~~~v~ 63 (247)
T 3ged_A 3 RGVIVTGGGHG-IGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVA------------------DPLTLK 63 (247)
T ss_dssp CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTT------------------SHHHHH
T ss_pred CEEEEecCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCC------------------CHHHHH
Confidence 56665665554 445555444 3688999998 444433 333455555555543 234566
Q ss_pred HHHHHHHHhhccCCCCcEEEEEee
Q 023384 196 KILKKRRAAIASNGERGKVIIIDI 219 (283)
Q Consensus 196 ~iL~~~~~~L~p~~~gg~lli~d~ 219 (283)
++++++.+.+.+ =-+||...
T Consensus 64 ~~v~~~~~~~g~----iDiLVNNA 83 (247)
T 3ged_A 64 KFVEYAMEKLQR----IDVLVNNA 83 (247)
T ss_dssp HHHHHHHHHHSC----CCEEEECC
T ss_pred HHHHHHHHHcCC----CCEEEECC
Confidence 777777777654 33455543
Done!